BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012477
(462 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224141011|ref|XP_002323868.1| predicted protein [Populus trichocarpa]
gi|222866870|gb|EEF04001.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/460 (79%), Positives = 413/460 (89%), Gaps = 3/460 (0%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
MAGQRNSYGKR+HSQ+DY D G NKRR +GDDR++F+I +DTVYRYLCP RKIGSIIGR
Sbjct: 1 MAGQRNSYGKRAHSQSDY-DIGGNKRRNSGDDRERFVIDSQDTVYRYLCPARKIGSIIGR 59
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GGEI+KQLRIDTKSKIR+GETVPG EERVVT+YS SDETN +ED ++SPAQDALF+VH
Sbjct: 60 GGEIIKQLRIDTKSKIRVGETVPGCEERVVTIYSPSDETNEYEDSGNYISPAQDALFRVH 119
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
D+VIAE+L+ ++DS+G QVTAKLLVPSDQIGC+IGKGGQIVQNIRSETGA IRILKDEH
Sbjct: 120 DKVIAEDLQVEDDSEGSPQVTAKLLVPSDQIGCIIGKGGQIVQNIRSETGAVIRILKDEH 179
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
LP CAL SDELVQISGEA+V+KKAL QIASRLHDNPSRSQHLL SA+ N +SS GSLVGP
Sbjct: 180 LPPCALSSDELVQISGEAAVLKKALYQIASRLHDNPSRSQHLLVSAVPNVYSSVGSLVGP 239
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIG 300
+AA PIVGIAPLMGPYGG+KGDT GDWSRSLYSAPRD+L+SKEFSLR+VCP ANIG VIG
Sbjct: 240 SAAAPIVGIAPLMGPYGGFKGDT-GDWSRSLYSAPRDELASKEFSLRVVCPTANIGAVIG 298
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
KGG IINQIRQESGA IKVDSS EGDDCLIT+S+KE + D S TIEA VRLQPRCSEK
Sbjct: 299 KGGTIINQIRQESGATIKVDSSVAEGDDCLITISAKEIY-DHYSPTIEAAVRLQPRCSEK 357
Query: 361 IERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE 420
+ERDSGLISFTTRLLVP+SRIGCL+GKGG+II EMR+LTKA IRI KENLPK+AS+DDE
Sbjct: 358 MERDSGLISFTTRLLVPSSRIGCLLGKGGAIIDEMRKLTKAIIRIPRKENLPKVASDDDE 417
Query: 421 MVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
MVQI+GDLD+AKDALIQ+ RLRAN+FDREGA+S +PV
Sbjct: 418 MVQIAGDLDVAKDALIQISRRLRANVFDREGAMSAILPVL 457
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 126/279 (45%), Gaps = 54/279 (19%)
Query: 29 TGDDRDQFIIGPEDTV------YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
TGD P D + R +CP IG++IG+GG I+ Q+R ++ + I++ +V
Sbjct: 262 TGDWSRSLYSAPRDELASKEFSLRVVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSV 321
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
++ ++T+ +A E D + SP +A ++ R +E++ D G T
Sbjct: 322 AEGDDCLITI-------SAKEIYDHY-SPTIEAAVRLQPRC-SEKMERDS---GLISFTT 369
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
+LLVPS +IGC++GKGG I+ +R T A IRI + E+LP A DE+VQI+G+ V K
Sbjct: 370 RLLVPSSRIGCLLGKGGAIIDEMRKLTKAIIRIPRKENLPKVASDDDEMVQIAGDLDVAK 429
Query: 203 KALCQIASRLHDNPSRSQHLLASAIS---------------NSHS--------------- 232
AL QI+ RL N + +++ + N S
Sbjct: 430 DALIQISRRLRANVFDREGAMSAILPVLPYLPVSAEGSEGLNYDSRDGKRHGRGSSYAGG 489
Query: 233 ------SSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAG 265
+SG G ++ I G YG Y G
Sbjct: 490 YSSSDYASGDGYGSYGSSQINASGGPYGAYGSYSSGRTG 528
>gi|225452863|ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|296082939|emb|CBI22240.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 742 bits (1916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/461 (81%), Positives = 419/461 (90%), Gaps = 3/461 (0%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
MAGQRNSYGKR+HSQ+DY D+G NKRR GDDRD F I PEDTVYRYLCP RKIGSIIGR
Sbjct: 1 MAGQRNSYGKRAHSQSDYGDNGGNKRRNPGDDRDPFTIEPEDTVYRYLCPGRKIGSIIGR 60
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GGEIVKQLR+DTKSKIRIGETVPG EERVVT+YS+SDETNAF+D D FVSPAQDALF+VH
Sbjct: 61 GGEIVKQLRVDTKSKIRIGETVPGCEERVVTIYSSSDETNAFDDSDTFVSPAQDALFRVH 120
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
DRV++EE+ G EDS+ QVT +LLVPSDQIGCVIGKGGQI+Q+IRSE+GAQ+RILKD+H
Sbjct: 121 DRVVSEEVHG-EDSEEASQVTVRLLVPSDQIGCVIGKGGQIIQSIRSESGAQVRILKDDH 179
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
LPSCAL SDELVQISGE S+V+KAL QIASRLHDNPSRSQHLLASA+ +SS GSL+GP
Sbjct: 180 LPSCALSSDELVQISGEPSLVRKALYQIASRLHDNPSRSQHLLASAVPTGYSSGGSLMGP 239
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIG 300
T+ PI+G+APL+G YGGY+GD+ GDWSRSLYSAPRD+ SSKEFSLRLVCP+ NIGGVIG
Sbjct: 240 TSGAPIMGLAPLVGTYGGYRGDS-GDWSRSLYSAPRDEASSKEFSLRLVCPIGNIGGVIG 298
Query: 301 KGGAIINQIRQESGAAIKVDSSST-EGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSE 359
KGG IINQIRQESGAAIKVDS+S E DDCLI +S+KEFFEDT S TIEA VRLQPRCSE
Sbjct: 299 KGGVIINQIRQESGAAIKVDSTSAAEADDCLIAISAKEFFEDTFSPTIEAAVRLQPRCSE 358
Query: 360 KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDD 419
K+ERDSG++SFTTRLLVPTSRIGCLIGKGG+IITEMR+LTKANIRIL KENLPK+ASEDD
Sbjct: 359 KVERDSGIVSFTTRLLVPTSRIGCLIGKGGAIITEMRKLTKANIRILSKENLPKVASEDD 418
Query: 420 EMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
EMVQI+GDLD+AKDALIQV TRLRANLFDREGAVS FVPV
Sbjct: 419 EMVQIAGDLDVAKDALIQVTTRLRANLFDREGAVSAFVPVL 459
>gi|356572762|ref|XP_003554535.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 548
Score = 742 bits (1916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/461 (80%), Positives = 414/461 (89%), Gaps = 3/461 (0%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
M GQR+ YGKR HSQ+D+ D+GPNKRR GDDR+QF+I EDTVYRY+CP RKIGS+IGR
Sbjct: 1 MGGQRSGYGKRPHSQSDH-DNGPNKRRNHGDDREQFVIDLEDTVYRYVCPGRKIGSVIGR 59
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GGEIVKQLR++TK+KIRIGETVPG EERVVT+YS SDETNA E G +VSPAQDALFKVH
Sbjct: 60 GGEIVKQLRVETKAKIRIGETVPGCEERVVTIYSPSDETNAVEGGGNYVSPAQDALFKVH 119
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
DRV+AE+ GD+D DGG QVTAKLLVPSDQIGCVIGKGG IVQNIRSETGAQIRILKD+H
Sbjct: 120 DRVVAEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGKGGSIVQNIRSETGAQIRILKDDH 179
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
LP CAL SDELVQI+G+ASVVKKALCQIASRLHDNPSRSQHLL SA+ + + GSL+GP
Sbjct: 180 LPLCALSSDELVQITGDASVVKKALCQIASRLHDNPSRSQHLLTSAVPGVYPAGGSLIGP 239
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDW-SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
A PIVGIAPL+G YGGYKGDT GDW RS+YSAPRD+ S+KEFS+RLVCP NIGGVI
Sbjct: 240 GAGAPIVGIAPLVGAYGGYKGDT-GDWPPRSMYSAPRDEASTKEFSVRLVCPTGNIGGVI 298
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSE 359
GKGG IINQIRQESGA IKVDSS+TEGD+CLI +S+KEFFE+T S TIEA VRLQPRCSE
Sbjct: 299 GKGGMIINQIRQESGATIKVDSSTTEGDECLIAISTKEFFEETFSPTIEAAVRLQPRCSE 358
Query: 360 KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDD 419
K+ERDSG+ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI+ KENLPKIASEDD
Sbjct: 359 KVERDSGIISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIISKENLPKIASEDD 418
Query: 420 EMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
EMVQISGDLD+AKDAL+ V+TRLRANLFDREGA+S+F+PV
Sbjct: 419 EMVQISGDLDIAKDALVHVLTRLRANLFDREGALSSFLPVL 459
>gi|356550877|ref|XP_003543809.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 561
Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/461 (79%), Positives = 410/461 (88%), Gaps = 3/461 (0%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
M GQR+ YGKR HSQ+D+ D+GPNKRR GDDR+QF+I EDTVYRY+CP RKIGS+IGR
Sbjct: 1 MGGQRSGYGKRPHSQSDH-DNGPNKRRNHGDDREQFVIDSEDTVYRYVCPGRKIGSVIGR 59
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GGEIVKQLR++TK+KIRIGETVPG EERVVT+Y SDETNA E G +VSPAQDALFKVH
Sbjct: 60 GGEIVKQLRVETKAKIRIGETVPGCEERVVTIYGPSDETNAVEGGGNYVSPAQDALFKVH 119
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
DRV+AE+ GD+D DGG QVTAKLLVPSDQIGCVIGKGG IVQNIR ETGAQIRILKD+H
Sbjct: 120 DRVVAEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGKGGSIVQNIRGETGAQIRILKDDH 179
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
LP CAL SDELVQI+G+A+VVKKAL QIASRLHDNPSRSQHLL SA+S + + GSL+GP
Sbjct: 180 LPMCALSSDELVQITGDAAVVKKALYQIASRLHDNPSRSQHLLTSAVSGVYPAGGSLIGP 239
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDW-SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
A PIVGIAPL+G YGGYKGDT GDW RS+YSAPRD+ SSKEFS+RLVCP NIGGVI
Sbjct: 240 GAGAPIVGIAPLVGSYGGYKGDT-GDWPPRSMYSAPRDEASSKEFSVRLVCPTGNIGGVI 298
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSE 359
GKGG IINQIRQ+SGA IKVDSS+ EGD+CLI +S+KEFFE+T S TIEA VRLQPRCSE
Sbjct: 299 GKGGMIINQIRQDSGATIKVDSSTIEGDECLIAISTKEFFEETFSPTIEAAVRLQPRCSE 358
Query: 360 KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDD 419
K+ERDSG+ISFTTRLLVPT+RIGCLIGKGGSIIT+MRRLTKANIRI+ KENLPKIA+EDD
Sbjct: 359 KVERDSGIISFTTRLLVPTTRIGCLIGKGGSIITDMRRLTKANIRIISKENLPKIANEDD 418
Query: 420 EMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
EMVQISGDLD+AKDAL+ V+TRLRANLFDREGA+S F+PV
Sbjct: 419 EMVQISGDLDVAKDALVHVLTRLRANLFDREGALSAFLPVL 459
>gi|449527609|ref|XP_004170802.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 546
Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/460 (76%), Positives = 405/460 (88%), Gaps = 13/460 (2%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
MAGQRNSYGKR+HSQ+DY+++G NKRR G+DRDQF+I EDTVYRYLCP++KIGS+IGR
Sbjct: 1 MAGQRNSYGKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGR 60
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GGEIVKQLRIDTKSKIRIGETVPGS+ERV+T+YSAS+ETN+ E+ +VSPAQ+ALFK+H
Sbjct: 61 GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETNSLEESSDYVSPAQEALFKIH 120
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
DRV+A++ ++ GGHQVTA+LLVPSDQIGC+IGKGGQIVQNIR+ETGAQ+RILKD+H
Sbjct: 121 DRVVADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDH 180
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
LP CAL SDELVQISGE +VKKAL QIASRLHDNPSRSQHLLASAI +SS GSL+ P
Sbjct: 181 LPRCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQHLLASAIPGVYSSGGSLMAP 240
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIG 300
T PI+G+APL+ PYGGYK APR+DLSSKEFSLRL+CP NIGGVIG
Sbjct: 241 THGAPIMGLAPLVSPYGGYK-------------APREDLSSKEFSLRLICPTENIGGVIG 287
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
KGGAIINQIRQE+ AAIKVDSS+TEGDDCLI +SSKEFFED+ S T+EA +RLQPRCSEK
Sbjct: 288 KGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEK 347
Query: 361 IERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE 420
+ERDSG+ISFTTRLLVPTSRIGCLIGKGG+IITE+RRLTKANIRIL KENLPK+A EDDE
Sbjct: 348 VERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDE 407
Query: 421 MVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
MVQISGDLD+AK+AL+ ++TRLRANLFDREGA+S +PV
Sbjct: 408 MVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVL 447
>gi|449447377|ref|XP_004141445.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 545
Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/460 (76%), Positives = 405/460 (88%), Gaps = 13/460 (2%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
MAGQRNSYGKR+HSQ+DY+++G NKRR G+DRDQF+I EDTVYRYLCP++KIGS+IGR
Sbjct: 1 MAGQRNSYGKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGR 60
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GGEIVKQLRIDTKSKIRIGETVPGS+ERV+T+YSAS+ETN+ E+ +VSPAQ+ALFK+H
Sbjct: 61 GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETNSLEESSDYVSPAQEALFKIH 120
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
DRV+A++ ++ GGHQVTA+LLVPSDQIGC+IGKGGQIVQNIR+ETGAQ+RILKD+H
Sbjct: 121 DRVVADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDH 180
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
LP CAL SDELVQISGE +VKKAL QIASRLHDNPSRSQHLLASAI +SS GSL+ P
Sbjct: 181 LPRCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQHLLASAIPGVYSSGGSLMAP 240
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIG 300
T PI+G+APL+ PYGGYK APR+DLSSKEFSLRL+CP NIGGVIG
Sbjct: 241 THGAPIMGLAPLVSPYGGYK-------------APREDLSSKEFSLRLICPTENIGGVIG 287
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
KGGAIINQIRQE+ AAIKVDSS+TEGDDCLI +SSKEFFED+ S T+EA +RLQPRCSEK
Sbjct: 288 KGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEK 347
Query: 361 IERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE 420
+ERDSG+ISFTTRLLVPTSRIGCLIGKGG+IITE+RRLTKANIRIL KENLPK+A EDDE
Sbjct: 348 VERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDE 407
Query: 421 MVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
MVQISGDLD+AK+AL+ ++TRLRANLFDREGA+S +PV
Sbjct: 408 MVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVL 447
>gi|357496471|ref|XP_003618524.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493539|gb|AES74742.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 553
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/466 (76%), Positives = 408/466 (87%), Gaps = 8/466 (1%)
Query: 1 MAGQR--NSYGKRSHSQTDYADHGPNKRRYTGDDRD--QFIIGPEDTVYRYLCPIRKIGS 56
M GQR ++YGKR SQ+DY G +R DRD QF+I EDTV+RYLCP RKIGS
Sbjct: 1 MGGQRERSNYGKRPRSQSDYDGGGNKRRNGGDHDRDREQFVINKEDTVFRYLCPGRKIGS 60
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIGRGGEIVKQLR++TK+KIRIGETVPG +ERVVTVYS+SDETN +DGDK VSPA+DAL
Sbjct: 61 IIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETNTVDDGDKLVSPAEDAL 120
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
FK+HDRV+AE+L D++ +GG QV AKLLVPSDQIGCV+GKGGQIVQN+RSETGAQIRIL
Sbjct: 121 FKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQIVQNLRSETGAQIRIL 180
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
KD+H+P+CALRSDELVQISG+A+VVKKAL QIASRLH NPSR+QHLL SA+ + + S GS
Sbjct: 181 KDDHVPACALRSDELVQISGDAAVVKKALHQIASRLHHNPSRTQHLLGSAVPSVYPSGGS 240
Query: 237 LVGPTAATPIVGIAPLMGPYGGYKGDTAGDW-SRSLYSAPRDDL-SSKEFSLRLVCPVAN 294
L+GPTA PIVG+APL+GPYGGYK DT GDW RS+YSAPRD++ SSKEFS+RLVCP N
Sbjct: 241 LMGPTAGPPIVGMAPLVGPYGGYKSDT-GDWPPRSMYSAPRDEISSSKEFSVRLVCPTGN 299
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ 354
+GGVIGKGG IINQIRQ+SGA IKVDSS+ +GDDCLIT+S+KEFFE+T S T+EA V LQ
Sbjct: 300 LGGVIGKGGGIINQIRQDSGATIKVDSSA-KGDDCLITISTKEFFEETFSPTVEAAVLLQ 358
Query: 355 PRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
PRCSEK ERDSG+ISFTTRLLV +SRIGCLIGKGGSIITEMRRLTK+NIRIL KENLPKI
Sbjct: 359 PRCSEKSERDSGIISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENLPKI 418
Query: 415 ASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
AS+DDEMVQISGDLD+AKDAL+QV+TRLRANLFDREGAV F+PV
Sbjct: 419 ASDDDEMVQISGDLDVAKDALVQVLTRLRANLFDREGAVPGFLPVL 464
>gi|357496469|ref|XP_003618523.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493538|gb|AES74741.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 569
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/466 (76%), Positives = 408/466 (87%), Gaps = 8/466 (1%)
Query: 1 MAGQR--NSYGKRSHSQTDYADHGPNKRRYTGDDRD--QFIIGPEDTVYRYLCPIRKIGS 56
M GQR ++YGKR SQ+DY G +R DRD QF+I EDTV+RYLCP RKIGS
Sbjct: 1 MGGQRERSNYGKRPRSQSDYDGGGNKRRNGGDHDRDREQFVINKEDTVFRYLCPGRKIGS 60
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIGRGGEIVKQLR++TK+KIRIGETVPG +ERVVTVYS+SDETN +DGDK VSPA+DAL
Sbjct: 61 IIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETNTVDDGDKLVSPAEDAL 120
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
FK+HDRV+AE+L D++ +GG QV AKLLVPSDQIGCV+GKGGQIVQN+RSETGAQIRIL
Sbjct: 121 FKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQIVQNLRSETGAQIRIL 180
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
KD+H+P+CALRSDELVQISG+A+VVKKAL QIASRLH NPSR+QHLL SA+ + + S GS
Sbjct: 181 KDDHVPACALRSDELVQISGDAAVVKKALHQIASRLHHNPSRTQHLLGSAVPSVYPSGGS 240
Query: 237 LVGPTAATPIVGIAPLMGPYGGYKGDTAGDW-SRSLYSAPRDDL-SSKEFSLRLVCPVAN 294
L+GPTA PIVG+APL+GPYGGYK DT GDW RS+YSAPRD++ SSKEFS+RLVCP N
Sbjct: 241 LMGPTAGPPIVGMAPLVGPYGGYKSDT-GDWPPRSMYSAPRDEISSSKEFSVRLVCPTGN 299
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ 354
+GGVIGKGG IINQIRQ+SGA IKVDSS+ +GDDCLIT+S+KEFFE+T S T+EA V LQ
Sbjct: 300 LGGVIGKGGGIINQIRQDSGATIKVDSSA-KGDDCLITISTKEFFEETFSPTVEAAVLLQ 358
Query: 355 PRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
PRCSEK ERDSG+ISFTTRLLV +SRIGCLIGKGGSIITEMRRLTK+NIRIL KENLPKI
Sbjct: 359 PRCSEKSERDSGIISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENLPKI 418
Query: 415 ASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
AS+DDEMVQISGDLD+AKDAL+QV+TRLRANLFDREGAV F+PV
Sbjct: 419 ASDDDEMVQISGDLDVAKDALVQVLTRLRANLFDREGAVPGFLPVL 464
>gi|356531744|ref|XP_003534436.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 540
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/461 (73%), Positives = 394/461 (85%), Gaps = 7/461 (1%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRY-TGDDRDQFIIGPEDTVYRYLCPIRKIGSIIG 59
M GQR+SYGKRSHS +D NKRR D+ +I +DTV+RYLCP+RKIGS+IG
Sbjct: 1 MTGQRSSYGKRSHSHSDSDAGSKNKRRNPAADESSSSLITADDTVFRYLCPVRKIGSVIG 60
Query: 60 RGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKV 119
RGG+IVKQLR DTK+KIRIG+ +PG +ERVVT++S+S+ETN F++ D VSPAQDALF+V
Sbjct: 61 RGGDIVKQLRADTKAKIRIGDALPGCDERVVTIHSSSEETNHFDETDDLVSPAQDALFRV 120
Query: 120 HDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
H RVIAE+ R DED + H VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD+
Sbjct: 121 HQRVIAEDAREDEDEERNH-VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDD 179
Query: 180 HLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVG 239
LP CAL +DELVQISGEA+VVKKAL QIA+++ DNPSRSQHLLASA+ +++ G
Sbjct: 180 RLPPCALSTDELVQISGEAAVVKKALFQIAAQIRDNPSRSQHLLASAVPGGYATGG---- 235
Query: 240 PTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
P A PI+G+AP +G YGGYKGDT GDWSRSLY APRD+ S +EFS+R VCP NIGGVI
Sbjct: 236 PGAGAPIMGVAPFVGAYGGYKGDT-GDWSRSLYPAPRDEASMREFSVRFVCPTGNIGGVI 294
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSE 359
GKGGAIINQIRQ+SGA IKVDSS+TEGDDCLI +S+KEFFED+ S TIEA VRLQPRCSE
Sbjct: 295 GKGGAIINQIRQDSGATIKVDSSATEGDDCLIIISTKEFFEDSFSPTIEAAVRLQPRCSE 354
Query: 360 KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDD 419
K+ERDSG++SFTTRLLVPTSRIGCLIGKGG+I+TEMRRLTKANIRIL K+NLPKIASEDD
Sbjct: 355 KVERDSGIVSFTTRLLVPTSRIGCLIGKGGTIVTEMRRLTKANIRILSKDNLPKIASEDD 414
Query: 420 EMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
EMVQISGDLD+AKDAL+Q +TRLRANLFD+E AVS F+PV
Sbjct: 415 EMVQISGDLDVAKDALVQALTRLRANLFDKERAVSGFLPVL 455
>gi|356568682|ref|XP_003552539.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 543
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/461 (73%), Positives = 390/461 (84%), Gaps = 7/461 (1%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRY-TGDDRDQFIIGPEDTVYRYLCPIRKIGSIIG 59
M GQR SYGKRSHS +D NKRR DD +I +DTV+RYLCP+RKIGS+IG
Sbjct: 1 MTGQRISYGKRSHSHSDSDAGSKNKRRNPAADDSSSSLITADDTVFRYLCPVRKIGSVIG 60
Query: 60 RGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKV 119
RGG+IVKQLR DTK+KIRIG+ +PG +ERVVT++S+S+ETN F++ VSPAQDALF+V
Sbjct: 61 RGGDIVKQLRADTKAKIRIGDALPGCDERVVTIHSSSEETNHFDETGDLVSPAQDALFRV 120
Query: 120 HDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
H RVIAE+ R DED + H VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD+
Sbjct: 121 HQRVIAEDAREDEDDERNH-VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDD 179
Query: 180 HLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVG 239
LP CAL +DELVQISGEA+VVKKAL QIA+++ DNPSRSQHLLASA+ +++ G
Sbjct: 180 RLPPCALSNDELVQISGEAAVVKKALFQIAAQIRDNPSRSQHLLASAVPGGYAAGGP--- 236
Query: 240 PTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
A PI+G+AP +G YGGYKGDT GDWSRSLY APRD+ S +EFS+R VCP NIGGVI
Sbjct: 237 -GAGAPIMGVAPFVGAYGGYKGDT-GDWSRSLYPAPRDEASMREFSVRFVCPTGNIGGVI 294
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSE 359
GKGGAIINQIRQ+SGA IKVDSS+TEGDDCLI +S KEFFED+ S TIEA VRLQPRCSE
Sbjct: 295 GKGGAIINQIRQDSGATIKVDSSATEGDDCLIIISMKEFFEDSFSPTIEAAVRLQPRCSE 354
Query: 360 KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDD 419
K+ERDSG++SFTTRLLVPTSRIGCLIGKGG+I+TEMRRLTKANIRIL KENLPKIASEDD
Sbjct: 355 KVERDSGIVSFTTRLLVPTSRIGCLIGKGGTIVTEMRRLTKANIRILSKENLPKIASEDD 414
Query: 420 EMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
EMVQISGDLD+AKDAL+Q +TRLRANLFD+E AVS F+PV
Sbjct: 415 EMVQISGDLDVAKDALVQALTRLRANLFDKERAVSGFLPVL 455
>gi|297807547|ref|XP_002871657.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297317494|gb|EFH47916.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 544
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/457 (69%), Positives = 388/457 (84%), Gaps = 5/457 (1%)
Query: 4 QRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGE 63
R+S+ KRS Q+DY D+G +KRRY GDDRD +I +DTV+RYLCP++KIGS+IGRGGE
Sbjct: 5 HRDSHRKRSRPQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGE 64
Query: 64 IVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV 123
IVKQLR+DT+SKIRIGE +PG +ERV+T+YS SDETNAF DG+K +SPAQDALF++HDRV
Sbjct: 65 IVKQLRMDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVLSPAQDALFRIHDRV 124
Query: 124 IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPS 183
+A++ + ++ S+G QVTAKLLVPSDQIGC++G+GGQIVQNIRSETGAQIRI+KD ++P
Sbjct: 125 VADDAQSEDSSEGEQQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIIKDRNMPL 184
Query: 184 CALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAA 243
CAL SDEL+QISGE +VKKAL QIASRLH+NPSRSQ+LL+SAIS + SGSL+
Sbjct: 185 CALNSDELIQISGEVLIVKKALHQIASRLHENPSRSQNLLSSAISGGY-PSGSLMSHAGG 243
Query: 244 TPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGG 303
+VGIAPLMG Y G GDWSR LY PR+D + EF +RLV PV NI VIGKGG
Sbjct: 244 PRLVGIAPLMGSY----GRDGGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGKGG 299
Query: 304 AIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIER 363
A+INQ+RQE+ A IKVDSS TEG+DCLIT+S++E FED S TIEAV+RLQP+CSEK+ER
Sbjct: 300 ALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSEKVER 359
Query: 364 DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQ 423
DSGL+SFTTRLLVP+SRIGC++GKGG+IITEMRR+TKANIRIL KENLPK+AS+DDEMVQ
Sbjct: 360 DSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQ 419
Query: 424 ISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
ISG+LD+AK+ALIQ+ +RLRAN+FDREGAVS +PV
Sbjct: 420 ISGELDVAKEALIQITSRLRANVFDREGAVSALMPVL 456
>gi|30685269|ref|NP_851040.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|30685276|ref|NP_197031.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|110737265|dbj|BAF00580.1| hypothetical protein [Arabidopsis thaliana]
gi|110738501|dbj|BAF01176.1| hypothetical protein [Arabidopsis thaliana]
gi|332004758|gb|AED92141.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332004759|gb|AED92142.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 548
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/457 (68%), Positives = 384/457 (84%), Gaps = 7/457 (1%)
Query: 4 QRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGE 63
R+S+ KRS Q+DY D+G +KRRY GDDRD +I +DTV+RYLCP++KIGS+IGRGG+
Sbjct: 11 HRDSHRKRSRPQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGD 70
Query: 64 IVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV 123
IVKQLR DT+SKIRIGE +PG +ERV+T+YS SDETNAF DG+K +SPAQDALF++HDRV
Sbjct: 71 IVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVLSPAQDALFRIHDRV 130
Query: 124 IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPS 183
+A++ R ++ +G QVTAKLLVPSDQIGC++G+GGQIVQNIRSETGAQIRI+KD ++P
Sbjct: 131 VADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRNMPL 190
Query: 184 CALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAA 243
CAL SDEL+QISGE +VKKAL QIASRLH+NPSRSQ+LL+S+ +GSL+
Sbjct: 191 CALNSDELIQISGEVLIVKKALLQIASRLHENPSRSQNLLSSS---GGYPAGSLMSHAGG 247
Query: 244 TPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGG 303
+VG+APLMG Y G AGDWSR LY PR+D + EF +RLV PV NI VIGKGG
Sbjct: 248 PRLVGLAPLMGSY----GRDAGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGKGG 303
Query: 304 AIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIER 363
A+INQ+RQE+ A IKVDSS TEG+DCLIT+S++E FED S TIEAV+RLQP+CS+K+ER
Sbjct: 304 ALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVER 363
Query: 364 DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQ 423
DSGL+SFTTRLLVP+SRIGC++GKGG+IITEMRR+TKANIRIL KENLPK+AS+DDEMVQ
Sbjct: 364 DSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQ 423
Query: 424 ISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
ISG+LD+AK+ALIQ+ +RLRAN+FDREGAVS +PV
Sbjct: 424 ISGELDVAKEALIQITSRLRANVFDREGAVSALMPVL 460
>gi|7671496|emb|CAB89337.1| putative protein [Arabidopsis thaliana]
Length = 568
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 312/492 (63%), Positives = 384/492 (78%), Gaps = 42/492 (8%)
Query: 4 QRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGE 63
R+S+ KRS Q+DY D+G +KRRY GDDRD +I +DTV+RYLCP++KIGS+IGRGG+
Sbjct: 11 HRDSHRKRSRPQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGD 70
Query: 64 IVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV 123
IVKQLR DT+SKIRIGE +PG +ERV+T+YS SDETNAF DG+K +SPAQDALF++HDRV
Sbjct: 71 IVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVLSPAQDALFRIHDRV 130
Query: 124 IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPS 183
+A++ R ++ +G QVTAKLLVPSDQIGC++G+GGQIVQNIRSETGAQIRI+KD ++P
Sbjct: 131 VADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRNMPL 190
Query: 184 CALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAA 243
CAL SDEL+QISGE +VKKAL QIASRLH+NPSRSQ+LL+S+ +GSL+
Sbjct: 191 CALNSDELIQISGEVLIVKKALLQIASRLHENPSRSQNLLSSS---GGYPAGSLMSHAGG 247
Query: 244 TPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGG 303
+VG+APLMG Y G AGDWSR LY PR+D + EF +RLV PV NI VIGKGG
Sbjct: 248 PRLVGLAPLMGSY----GRDAGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGKGG 303
Query: 304 AIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIER 363
A+INQ+RQE+ A IKVDSS TEG+DCLIT+S++E FED S TIEAV+RLQP+CS+K+ER
Sbjct: 304 ALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVER 363
Query: 364 DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEM-- 421
DSGL+SFTTRLLVP+SRIGC++GKGG+IITEMRR+TKANIRIL KENLPK+AS+DDEM
Sbjct: 364 DSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQ 423
Query: 422 ---------------------------------VQISGDLDLAKDALIQVMTRLRANLFD 448
VQISG+LD+AK+ALIQ+ +RLRAN+FD
Sbjct: 424 VNFMVLLLKFSLQFLLSRLRYFTWSVNSNSNFDVQISGELDVAKEALIQITSRLRANVFD 483
Query: 449 REGAVSTFVPVF 460
REGAVS +PV
Sbjct: 484 REGAVSALMPVL 495
>gi|147853553|emb|CAN81693.1| hypothetical protein VITISV_009249 [Vitis vinifera]
Length = 543
Score = 626 bits (1614), Expect = e-177, Method: Compositional matrix adjust.
Identities = 327/472 (69%), Positives = 385/472 (81%), Gaps = 14/472 (2%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
MAGQRN YGKRSHSQ+DY +G +KRR GDD++Q IG EDTVYRYLCP+RKIGSIIGR
Sbjct: 1 MAGQRNDYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIGVEDTVYRYLCPVRKIGSIIGR 60
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GG+I KQLR +TKS IRIGET+PG EERVVT+YS+S+ETN F D + VSPAQDALF+VH
Sbjct: 61 GGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETNPFGDTGELVSPAQDALFRVH 120
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
DR++A EL DE+ + QVT ++LVPSDQIGCVIGKGGQ++QNIRSET AQIRILKDEH
Sbjct: 121 DRIVAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDEH 180
Query: 181 LPSCALRSDELV------------QISGEASVVKKALCQIASRLHDNPSRSQHLLASAIS 228
LP CAL SDEL+ QI G+ASVV+KAL Q+ASRLH+NPSRSQHLL S+
Sbjct: 181 LPPCALSSDELLQAFGNVFWALTSQIIGDASVVRKALHQLASRLHENPSRSQHLLLSSSP 240
Query: 229 NSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRL 288
N + S G+ + P P+VG+APLMG YGGYKGDT GDWS S YSA RD+ S+KEFSLRL
Sbjct: 241 NMYQSGGTFMTPNIDAPLVGVAPLMGSYGGYKGDT-GDWSHSYYSARRDESSAKEFSLRL 299
Query: 289 VCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIE 348
VCP NIGGVIGKGG II QIRQESGA+IKVDSSS EGDDC+I +S+KEFFED S TI+
Sbjct: 300 VCPTGNIGGVIGKGGGIIKQIRQESGASIKVDSSSAEGDDCIIFISAKEFFEDP-SPTID 358
Query: 349 AVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPK 408
A +RLQPRCSEK ER+S TTRLLVP+SRIGCLIGKGG+II+EMR +T+ANIRIL K
Sbjct: 359 AALRLQPRCSEKAERESSDSVVTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSK 418
Query: 409 ENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
ENLPK+ASEDDEMVQI+G+L++A +AL+QV RL+ANLF+REGA++ P
Sbjct: 419 ENLPKVASEDDEMVQITGELNVASNALLQVTLRLKANLFEREGAIAAIPPTL 470
>gi|357501947|ref|XP_003621262.1| KH domain-containing protein [Medicago truncatula]
gi|355496277|gb|AES77480.1| KH domain-containing protein [Medicago truncatula]
Length = 571
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 340/475 (71%), Positives = 390/475 (82%), Gaps = 14/475 (2%)
Query: 1 MAGQRNSYG-KRSHSQTDYADH-GPNKRRYTGDD----RDQFIIGPEDTVYRYLCPIRKI 54
MAGQR SYG KRSHS D+ NKRR D RD F I +DTVYRYLCP+RKI
Sbjct: 1 MAGQRTSYGNKRSHSHNSVDDNRTNNKRRNPNTDETTPRDTFHITQDDTVYRYLCPVRKI 60
Query: 55 GSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQD 114
GSIIGRGGEIVKQLR+DTK+KIRIGETVPG +ERVVTVYS SDE+N FED +F+ PA D
Sbjct: 61 GSIIGRGGEIVKQLRLDTKAKIRIGETVPGCDERVVTVYSVSDESNDFEDSGEFMCPAMD 120
Query: 115 ALFKVHDRVIAEELRGDEDSD-------GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRS 167
AL ++H +VIAE+LRG ED D GG VTAKLLV SDQIGCVIGKGGQIVQNIRS
Sbjct: 121 ALVRIHQKVIAEDLRGVEDEDVDMEKVDGGDLVTAKLLVASDQIGCVIGKGGQIVQNIRS 180
Query: 168 ETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAI 227
ETGAQIRILKD+ LP CAL SDELVQISGE +VVKKAL Q+A+RLHDNPSR+QHLL SA+
Sbjct: 181 ETGAQIRILKDDRLPLCALNSDELVQISGEIAVVKKALIQVAARLHDNPSRTQHLLTSAV 240
Query: 228 SNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLR 287
+++SGS+VG PI+G+AP+ G YGGYKGD D+ RS+Y RD+ S KEFS+R
Sbjct: 241 PGVYAASGSMVGSHGGAPIMGMAPIGGGYGGYKGDVV-DYPRSMYPGSRDEGSVKEFSVR 299
Query: 288 LVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATI 347
VCP ANIGGVIGKGG IINQIRQ+SGA IKVDSS+TEGDDCLI +S++E FED SATI
Sbjct: 300 FVCPTANIGGVIGKGGGIINQIRQDSGANIKVDSSATEGDDCLIAISARELFEDPFSATI 359
Query: 348 EAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILP 407
EA V LQPRCSEK+ERDSG++SFT+RLLV +SRIGCLIGKGGSIITEMRRLTKANIRIL
Sbjct: 360 EAAVLLQPRCSEKVERDSGILSFTSRLLVSSSRIGCLIGKGGSIITEMRRLTKANIRILS 419
Query: 408 KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVFLC 462
KE+LPKIA+EDDEMVQISG+LD+AKDAL+QV+TRLRANLFD+E +VS+ +P L
Sbjct: 420 KEDLPKIATEDDEMVQISGELDIAKDALLQVLTRLRANLFDKERSVSSLLPPVLA 474
>gi|53749469|gb|AAU90323.1| KH domain containing protein [Solanum demissum]
Length = 533
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 290/458 (63%), Positives = 353/458 (77%), Gaps = 13/458 (2%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
MAGQRN+YGKR S++DY+ +KRR D+++ IGPEDTV+RYLCP KIGSIIG
Sbjct: 1 MAGQRNNYGKRMQSESDYSRSDGSKRRTPTDEKESNSIGPEDTVFRYLCPTGKIGSIIGV 60
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GG+I KQLR +T SKIRI ET+PG EERVVT+YS S+ETN ED +SPAQDALF+VH
Sbjct: 61 GGDIAKQLRTETNSKIRISETIPGCEERVVTIYSGSEETNVSEDTGDLISPAQDALFRVH 120
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
DRV+AE+LR DED + Q+T ++LVPSDQIGCVIGKGGQ++QN+RSETGAQIR+L EH
Sbjct: 121 DRVLAEDLRMDEDLEDHQQITVRMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVLSSEH 180
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
LP CAL SDEL+QI+GE +VVKKAL Q+A+RLHDNPSRSQH L S+ S S +G V P
Sbjct: 181 LPPCALNSDELLQITGEGAVVKKALYQVAARLHDNPSRSQHQLLSSPSIFRSGAG-FVNP 239
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIG 300
A T ++G+ LMGPY YK D S S KEF++RLVCP N+G VIG
Sbjct: 240 HAGTQVMGVTSLMGPYASYKSDGRSKSS-----------SVKEFAVRLVCPTENVGAVIG 288
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
KGG II Q+RQESGA+IKVDS++ EGDDC+I VS+KE FED S TI+A +RLQPR SEK
Sbjct: 289 KGGGIIKQLRQESGASIKVDSAAAEGDDCIIFVSAKEAFEDQ-SPTIDATMRLQPRSSEK 347
Query: 361 IERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE 420
E++SG TTRLLVP+SR+GCLIGKGGSII EMR T+A+IR+L KENLPK+ASEDDE
Sbjct: 348 TEKESGDAILTTRLLVPSSRVGCLIGKGGSIINEMRNSTRASIRVLSKENLPKVASEDDE 407
Query: 421 MVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVP 458
MVQI+GD ++A +AL+QV+ RLRAN F+ EG+ F P
Sbjct: 408 MVQITGDANVATNALLQVLMRLRANTFEMEGSFPAFSP 445
>gi|113205451|gb|AAW28569.2| KH domain containing protein, putative [Solanum demissum]
Length = 600
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 293/458 (63%), Positives = 356/458 (77%), Gaps = 13/458 (2%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
MAGQRN+YGKR S++DY+ +KRR D+++ IGPEDTV+RYLCP KIGSIIG
Sbjct: 1 MAGQRNNYGKRMQSESDYSRSDGSKRRTPTDEKESNSIGPEDTVFRYLCPTGKIGSIIGV 60
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GG+I KQLR +T SKIRI ET+PG EERVVT+YS S+ETN ED +SPAQDALF+VH
Sbjct: 61 GGDIAKQLRTETNSKIRISETIPGCEERVVTIYSGSEETNVSEDTGDLISPAQDALFRVH 120
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
DRV+AE+LR DED + Q+T ++LVPSDQIGCVIGKGGQ++QN+RSETGAQIR+L EH
Sbjct: 121 DRVLAEDLRMDEDLEDHQQITVRMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVLSSEH 180
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
LP CAL SDEL+QI+GE +VVKKAL Q+A+RLHDNPSRSQH L S+ S S +G LV P
Sbjct: 181 LPPCALNSDELLQITGEGAVVKKALYQVAARLHDNPSRSQHQLLSSPSIFRSGAG-LVNP 239
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIG 300
A T ++G+ LMGPY YK D RS S S KEF++RLVCP N+G VIG
Sbjct: 240 HAGTQVMGVTSLMGPYASYKSD-----GRSRSS------SVKEFAVRLVCPTENVGAVIG 288
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
KGG II Q+RQESGA+IKVDS++ EGDDC+I VS+KE FED S TI+A +RLQPR SEK
Sbjct: 289 KGGGIIKQLRQESGASIKVDSAAAEGDDCIIFVSAKEAFEDQ-SPTIDATMRLQPRSSEK 347
Query: 361 IERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE 420
E++SG TTRLLVP+SR+GCLIGKGGSII EMR T+A+IR+L KENLPK+ASEDDE
Sbjct: 348 TEKESGDAILTTRLLVPSSRVGCLIGKGGSIINEMRNSTRASIRVLSKENLPKVASEDDE 407
Query: 421 MVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVP 458
MVQI+GD ++A +AL+QV+ RLRAN F+ EG+ F P
Sbjct: 408 MVQITGDANVAANALLQVLMRLRANTFEMEGSFPAFSP 445
>gi|296086352|emb|CBI31941.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 309/460 (67%), Positives = 363/460 (78%), Gaps = 31/460 (6%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
MAGQRN YGKRSHSQ+DY +G +KRR GDD++Q IG EDTVYRYLCP+RKIGSIIGR
Sbjct: 67 MAGQRNDYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIGVEDTVYRYLCPVRKIGSIIGR 126
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GG+I KQLR +TKS IRIGET+PG EERVVT+YS+S+ETN F D + VSPAQDALF+VH
Sbjct: 127 GGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETNPFGDTGELVSPAQDALFRVH 186
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
DR++A EL DE+ + QVT ++LVPSDQIGCVIGKGGQ++QNIRSET AQIRILKDEH
Sbjct: 187 DRIVAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDEH 246
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
LP CAL SDEL+QI G+ASVV+KAL Q+ASRLH+NPSRSQHLL S+ N + S
Sbjct: 247 LPPCALSSDELLQIIGDASVVRKALHQLASRLHENPSRSQHLLLSSSPNMYQS------- 299
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIG 300
GDWS S YSA RD+ S+KEFSLRLVCP NIGGVIG
Sbjct: 300 -----------------------GGDWSHSYYSARRDESSAKEFSLRLVCPTGNIGGVIG 336
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
KGG II QIRQESGA+IKVDSSS EGDDC+I +S+KEFFED S TI+A +RLQPRCSEK
Sbjct: 337 KGGGIIKQIRQESGASIKVDSSSAEGDDCIIFISAKEFFEDP-SPTIDAALRLQPRCSEK 395
Query: 361 IERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE 420
ER+S TTRLLVP+SRIGCLIGKGG+II+EMR +T+ANIRIL KENLPK+ASEDDE
Sbjct: 396 AERESSDSVVTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKENLPKVASEDDE 455
Query: 421 MVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
MVQI+G+L++A +AL+QV RL+ANLF+REGA++ P
Sbjct: 456 MVQITGELNVASNALLQVTLRLKANLFEREGAIAAIPPTL 495
>gi|359473301|ref|XP_002272287.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 517
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 309/460 (67%), Positives = 363/460 (78%), Gaps = 31/460 (6%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
MAGQRN YGKRSHSQ+DY +G +KRR GDD++Q IG EDTVYRYLCP+RKIGSIIGR
Sbjct: 1 MAGQRNDYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIGVEDTVYRYLCPVRKIGSIIGR 60
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GG+I KQLR +TKS IRIGET+PG EERVVT+YS+S+ETN F D + VSPAQDALF+VH
Sbjct: 61 GGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETNPFGDTGELVSPAQDALFRVH 120
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
DR++A EL DE+ + QVT ++LVPSDQIGCVIGKGGQ++QNIRSET AQIRILKDEH
Sbjct: 121 DRIVAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDEH 180
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
LP CAL SDEL+QI G+ASVV+KAL Q+ASRLH+NPSRSQHLL S+ N + S
Sbjct: 181 LPPCALSSDELLQIIGDASVVRKALHQLASRLHENPSRSQHLLLSSSPNMYQS------- 233
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIG 300
GDWS S YSA RD+ S+KEFSLRLVCP NIGGVIG
Sbjct: 234 -----------------------GGDWSHSYYSARRDESSAKEFSLRLVCPTGNIGGVIG 270
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
KGG II QIRQESGA+IKVDSSS EGDDC+I +S+KEFFED S TI+A +RLQPRCSEK
Sbjct: 271 KGGGIIKQIRQESGASIKVDSSSAEGDDCIIFISAKEFFEDP-SPTIDAALRLQPRCSEK 329
Query: 361 IERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE 420
ER+S TTRLLVP+SRIGCLIGKGG+II+EMR +T+ANIRIL KENLPK+ASEDDE
Sbjct: 330 AERESSDSVVTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKENLPKVASEDDE 389
Query: 421 MVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
MVQI+G+L++A +AL+QV RL+ANLF+REGA++ P
Sbjct: 390 MVQITGELNVASNALLQVTLRLKANLFEREGAIAAIPPTL 429
>gi|357112153|ref|XP_003557874.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 538
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 299/459 (65%), Positives = 373/459 (81%), Gaps = 9/459 (1%)
Query: 3 GQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGG 62
G RNS+GKR +DYA++G KRR GDD + P+DTVYRYLC RKIGSIIGRGG
Sbjct: 5 GHRNSHGKR---YSDYAENGGGKRRNPGDD--TYAPCPDDTVYRYLCASRKIGSIIGRGG 59
Query: 63 EIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDR 122
EI KQLR DT++KIRIGE+VPG +ERV+T++S+S ETN ED + V PAQDALF+VH++
Sbjct: 60 EIAKQLRTDTQAKIRIGESVPGCDERVITIFSSSRETNTVEDTEDKVCPAQDALFRVHEK 119
Query: 123 VIAEELRGDEDSDGG-HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL 181
+I ++ GDE+++ G QV +LLVPSDQIGC+IGKGG I+Q IRS+TG+ IR+L EHL
Sbjct: 120 LITDDGPGDEENEEGLAQVIVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSHIRVLSTEHL 179
Query: 182 PSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPT 241
P+CA+ DEL+QISG+ VV+KAL Q++SRLHDNPSRSQHLLAS+++ + GS G +
Sbjct: 180 PACAISGDELLQISGDPLVVRKALLQVSSRLHDNPSRSQHLLASSLTQPYPV-GSRHGSS 238
Query: 242 AATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGK 301
+ TP+VGIAP++ PYGGYKGD GDW S+Y R++ S+KEFSLRL+C +++GGVIGK
Sbjct: 239 STTPVVGIAPMVNPYGGYKGDMVGDWP-SIYQPRREESSAKEFSLRLLCAASDVGGVIGK 297
Query: 302 GGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI 361
GG II QIRQESGA IKVDSSS E DDC+ITVS+KEFFED +S TI+A VRLQPRCSEK
Sbjct: 298 GGGIIKQIRQESGAFIKVDSSSAE-DDCIITVSAKEFFEDPISPTIDATVRLQPRCSEKT 356
Query: 362 ERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEM 421
+ +SG S+TTRLLV TSRIGCLIGKGGSIITE+RR ++ANIRIL KEN+PK+ASED+EM
Sbjct: 357 DPESGEPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVASEDEEM 416
Query: 422 VQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
VQISGDLD+AK AL+Q+ TRL+AN F+REG++S F PV
Sbjct: 417 VQISGDLDVAKHALVQITTRLKANFFEREGSLSGFQPVI 455
>gi|308081899|ref|NP_001183640.1| uncharacterized protein LOC100502234 [Zea mays]
gi|238013618|gb|ACR37844.1| unknown [Zea mays]
gi|414867002|tpg|DAA45559.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
gi|414867003|tpg|DAA45560.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
gi|414867004|tpg|DAA45561.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
Length = 541
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 296/462 (64%), Positives = 376/462 (81%), Gaps = 9/462 (1%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
MAG RNS+GKR Q+D+ ++G +KRR GDD + GP+DTVYRYLC RKIGSIIGR
Sbjct: 1 MAGHRNSHGKR---QSDFTENGGSKRRNPGDD--TYAPGPDDTVYRYLCASRKIGSIIGR 55
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GGEI KQLR +T++KIRIGE+VPG +ERVVT++S S +TN + + V PAQDALF+VH
Sbjct: 56 GGEIAKQLRTETQAKIRIGESVPGCDERVVTIFSTSRKTNTIDGAEDEVCPAQDALFRVH 115
Query: 121 DRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+R+ ++E G+EDS+ QVT +LLVPSDQIGC+IGKGGQI+Q IRSETGAQIR+L ++
Sbjct: 116 ERLASDEGLGNEDSEEISPQVTVRLLVPSDQIGCIIGKGGQIIQGIRSETGAQIRVLSND 175
Query: 180 HLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVG 239
H+P+CA+ DEL+QISG+ VV+KAL Q++SRLH+NPS+SQHLLAS+++ + S L G
Sbjct: 176 HIPACAISGDELLQISGDTVVVRKALHQVSSRLHNNPSKSQHLLASSLTQPYPGSTHLGG 235
Query: 240 PTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
+ A P+VGI P++ PYGGYKGD AGDW SLY RD+ S+KEFSLRL+C AN+GGVI
Sbjct: 236 SSTA-PVVGITPVIPPYGGYKGDVAGDWP-SLYQPRRDESSAKEFSLRLLCAAANVGGVI 293
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTE-GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCS 358
GKGG II QIRQESGA IKV SS+++ DDC+ITVS+KEFFED +S TI+A VRLQPRCS
Sbjct: 294 GKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFEDPVSPTIDAAVRLQPRCS 353
Query: 359 EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASED 418
EK + +S S+TTRLLV TSRIGCLIGKGGSIITE+RR ++AN+RIL KEN+PK+A+ED
Sbjct: 354 EKSDLESAEQSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANVRILSKENVPKVAAED 413
Query: 419 DEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
DEMVQI+G LD+A++AL+Q+ TRL+AN F+REG++S F PV
Sbjct: 414 DEMVQITGGLDVARNALVQIATRLKANFFEREGSLSAFPPVI 455
>gi|125544080|gb|EAY90219.1| hypothetical protein OsI_11787 [Oryza sativa Indica Group]
Length = 542
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 295/459 (64%), Positives = 373/459 (81%), Gaps = 9/459 (1%)
Query: 3 GQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGG 62
G RNS+GKR +DYA++G KRR GDD + GP+DTVYRYLCP RKIGSIIGRGG
Sbjct: 5 GHRNSHGKR---HSDYAENGGGKRRNPGDD--TYAPGPDDTVYRYLCPSRKIGSIIGRGG 59
Query: 63 EIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDR 122
EI KQ+R DT++KIRIGE+V G +ERV+T++S+S ETN D + V PAQDALF+VH++
Sbjct: 60 EIAKQMRADTQAKIRIGESVSGCDERVITIFSSSRETNTLVDAEDKVCPAQDALFRVHEK 119
Query: 123 VIAEELRGDEDSDGG-HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL 181
+ ++ G+E+SD G QVT +LLVPSDQIGC+IGKGG I+Q IRS+TGA IR+L +E+L
Sbjct: 120 LSIDDDIGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENL 179
Query: 182 PSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPT 241
P+CA+ DEL+QISG+++VV+KAL Q++SRLHDNPSRSQHLLAS+++ + GS +G +
Sbjct: 180 PACAISGDELLQISGDSTVVRKALLQVSSRLHDNPSRSQHLLASSMTQPYPV-GSHLGSS 238
Query: 242 AATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGK 301
+ P+VGI PL+ YGGYKGD AGDW S+Y R++ S+KEFSLRL+C +N+GGVIGK
Sbjct: 239 STAPVVGITPLISSYGGYKGDVAGDWP-SIYQPRREESSAKEFSLRLLCAASNVGGVIGK 297
Query: 302 GGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI 361
GG II QIRQESGA IKVDSS+TE DDC+ITVS+KEFFED +S TI A V LQPRCSEK
Sbjct: 298 GGGIIKQIRQESGAFIKVDSSNTE-DDCIITVSAKEFFEDPVSPTINAAVHLQPRCSEKT 356
Query: 362 ERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEM 421
+ +S + S+TTRLLV TSRIGCLIGKGGSIITE+RR ++ANIRIL KEN+PK+A+ED+EM
Sbjct: 357 DPESAIPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEM 416
Query: 422 VQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
VQISGDLD+ + AL+Q+ TRL+AN F+REGA+S F PV
Sbjct: 417 VQISGDLDVVRHALLQITTRLKANFFEREGALSGFPPVI 455
>gi|115453243|ref|NP_001050222.1| Os03g0376800 [Oryza sativa Japonica Group]
gi|18921324|gb|AAL82529.1|AC084766_15 putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|108708431|gb|ABF96226.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|108708432|gb|ABF96227.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113548693|dbj|BAF12136.1| Os03g0376800 [Oryza sativa Japonica Group]
gi|125586438|gb|EAZ27102.1| hypothetical protein OsJ_11034 [Oryza sativa Japonica Group]
gi|215686826|dbj|BAG89676.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695345|dbj|BAG90536.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704897|dbj|BAG94925.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 542
Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust.
Identities = 295/459 (64%), Positives = 373/459 (81%), Gaps = 9/459 (1%)
Query: 3 GQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGG 62
G RNS+GKR +DYA++G KRR GDD + GP+DTVYRYLCP RKIGSIIGRGG
Sbjct: 5 GHRNSHGKR---HSDYAENGGGKRRNPGDD--TYAPGPDDTVYRYLCPSRKIGSIIGRGG 59
Query: 63 EIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDR 122
EI KQ+R DT++KIRIGE+V G +ERV+T++S+S ETN D + V PAQDALF+VH++
Sbjct: 60 EIAKQMRADTQAKIRIGESVSGCDERVITIFSSSRETNTLVDAEDKVCPAQDALFRVHEK 119
Query: 123 VIAEELRGDEDSDGG-HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL 181
+ ++ G+E+SD G QVT +LLVPSDQIGC+IGKGG I+Q IRS+TGA IR+L +E+L
Sbjct: 120 LSIDDDIGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENL 179
Query: 182 PSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPT 241
P+CA+ DEL+QISG+++VV+KAL Q++SRLHDNPSRSQHLLAS+++ + GS +G +
Sbjct: 180 PACAISGDELLQISGDSTVVRKALLQVSSRLHDNPSRSQHLLASSMTQPYPV-GSHLGSS 238
Query: 242 AATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGK 301
+ P+VGI PL+ YGGYKGD AGDW S+Y R++ S+KEFSLRL+C +N+GGVIGK
Sbjct: 239 STAPVVGITPLISSYGGYKGDVAGDWP-SIYQPRREESSAKEFSLRLLCAASNVGGVIGK 297
Query: 302 GGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI 361
GG II QIRQESGA IKVDSS+TE DDC+ITVS+KEFFED +S TI A V LQPRCSEK
Sbjct: 298 GGGIIKQIRQESGAFIKVDSSNTE-DDCIITVSAKEFFEDPVSPTINAAVHLQPRCSEKT 356
Query: 362 ERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEM 421
+ +S + S+TTRLLV TSRIGCLIGKGGSIITE+RR ++ANIRIL KEN+PK+A+ED+EM
Sbjct: 357 DPESAIPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEM 416
Query: 422 VQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
VQISGDLD+ + AL+Q+ TRL+AN F+REGA+S F PV
Sbjct: 417 VQISGDLDVVRHALLQITTRLKANFFEREGALSGFPPVI 455
>gi|357112139|ref|XP_003557867.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 542
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 294/459 (64%), Positives = 372/459 (81%), Gaps = 9/459 (1%)
Query: 3 GQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGG 62
G RNS+GKR +DY+++G KRR GDD + GP+DTVYRYLC RKIGSIIGRGG
Sbjct: 5 GHRNSHGKR---HSDYSENGGGKRRNPGDD--TYAPGPDDTVYRYLCTSRKIGSIIGRGG 59
Query: 63 EIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDR 122
EI KQLR DT++KIRIGE+VPG +ERV+T++S+S ETN ED + V PAQDALF+VH++
Sbjct: 60 EIAKQLRTDTQAKIRIGESVPGCDERVITIFSSSRETNTIEDTEDKVCPAQDALFRVHEK 119
Query: 123 VIAEELRGDEDSDGG-HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL 181
+IA++ GDE+++ G QVT +LLVPSDQIGC+IGKGG I+Q IRS+TG+QIR+L +E L
Sbjct: 120 LIADDGPGDEENEEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSQIRVLSNERL 179
Query: 182 PSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPT 241
P+C + DEL+QISG+ VV+KAL Q++SRLHDNPSRSQHL A ++ + GS G +
Sbjct: 180 PACGISGDELLQISGDPLVVRKALLQVSSRLHDNPSRSQHLQAPSLMQPYPV-GSRNGSS 238
Query: 242 AATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGK 301
+ P+VGIAP++ PYGGYKGD GDW S+Y R+D S+K+FSLRL+C +++GGVIGK
Sbjct: 239 STAPVVGIAPMVSPYGGYKGDMVGDWP-SIYQPRREDSSAKDFSLRLLCAASDVGGVIGK 297
Query: 302 GGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI 361
GG II QIRQESGA IKVDSSS E DDC+ITVS+KEFFED +S TI+A VRLQP+CSEK
Sbjct: 298 GGGIIKQIRQESGAFIKVDSSSAE-DDCIITVSAKEFFEDPVSPTIDATVRLQPKCSEKT 356
Query: 362 ERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEM 421
+ +SG S+TTRLLV TS+IGCLIGKGGSIITE+RR ++ANIRIL KEN+PK+ASED+EM
Sbjct: 357 DPESGEPSYTTRLLVSTSQIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVASEDEEM 416
Query: 422 VQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
VQISGDL++A+ AL+Q+ TRL+AN F+REGA+S F PV
Sbjct: 417 VQISGDLEVARHALVQITTRLKANFFEREGALSGFQPVI 455
>gi|413955311|gb|AFW87960.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
gi|413955312|gb|AFW87961.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
Length = 543
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 293/462 (63%), Positives = 370/462 (80%), Gaps = 9/462 (1%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
M+G RNS+GKR +DY + G KRR GDD + GP+DTVYRYLC RKIGSIIGR
Sbjct: 1 MSGHRNSHGKR---YSDYTETGGGKRRNPGDD--TYAPGPDDTVYRYLCASRKIGSIIGR 55
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GGEI KQLR +T++KIRIGE+VPG EERV+T++S+S TN +D + V PAQDALF+VH
Sbjct: 56 GGEIAKQLRTETQAKIRIGESVPGCEERVITIFSSSRRTNTIDDAEDKVCPAQDALFRVH 115
Query: 121 DRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+R+ +E G+EDS+ QVT +LLVPSDQIGC++GKGG I+Q IRSETGAQIR+L +
Sbjct: 116 ERLATDESFGNEDSEEISPQVTVRLLVPSDQIGCILGKGGHIIQGIRSETGAQIRVLSKD 175
Query: 180 HLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVG 239
H+P+CA+ DEL+QISG+ VVKKALCQ++SRLH+NPS+SQHLLAS+++ + G+ +G
Sbjct: 176 HIPACAISGDELLQISGDMVVVKKALCQVSSRLHNNPSKSQHLLASSLTQPYPG-GTHLG 234
Query: 240 PTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
++A P+VGI P++ PYGGYKGD AGDW SLY RD+ S+KEFSLRL+C AN+GGVI
Sbjct: 235 GSSAAPVVGITPVIPPYGGYKGDVAGDWP-SLYQPRRDESSAKEFSLRLLCAAANVGGVI 293
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTE-GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCS 358
GKGG II QIRQESGA IKV SS+++ DDC+ITVS+KEFFED +S TI+A VRLQ RCS
Sbjct: 294 GKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFEDPVSPTIDAAVRLQLRCS 353
Query: 359 EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASED 418
EK + + S+TTRLLV TSRIGCLIGKGGSIITE+RR ++ANIRIL KEN+PK+A+ED
Sbjct: 354 EKSDSELAEQSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAED 413
Query: 419 DEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
+EMVQISG LD+A+ AL+Q+ TRL+AN F+REG++S F V
Sbjct: 414 EEMVQISGGLDVARHALVQIATRLKANFFEREGSLSAFPSVI 455
>gi|413955310|gb|AFW87959.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
Length = 528
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 293/462 (63%), Positives = 370/462 (80%), Gaps = 9/462 (1%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
M+G RNS+GKR +DY + G KRR GDD + GP+DTVYRYLC RKIGSIIGR
Sbjct: 1 MSGHRNSHGKR---YSDYTETGGGKRRNPGDD--TYAPGPDDTVYRYLCASRKIGSIIGR 55
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GGEI KQLR +T++KIRIGE+VPG EERV+T++S+S TN +D + V PAQDALF+VH
Sbjct: 56 GGEIAKQLRTETQAKIRIGESVPGCEERVITIFSSSRRTNTIDDAEDKVCPAQDALFRVH 115
Query: 121 DRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+R+ +E G+EDS+ QVT +LLVPSDQIGC++GKGG I+Q IRSETGAQIR+L +
Sbjct: 116 ERLATDESFGNEDSEEISPQVTVRLLVPSDQIGCILGKGGHIIQGIRSETGAQIRVLSKD 175
Query: 180 HLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVG 239
H+P+CA+ DEL+QISG+ VVKKALCQ++SRLH+NPS+SQHLLAS+++ + G+ +G
Sbjct: 176 HIPACAISGDELLQISGDMVVVKKALCQVSSRLHNNPSKSQHLLASSLTQPYPG-GTHLG 234
Query: 240 PTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
++A P+VGI P++ PYGGYKGD AGDW SLY RD+ S+KEFSLRL+C AN+GGVI
Sbjct: 235 GSSAAPVVGITPVIPPYGGYKGDVAGDWP-SLYQPRRDESSAKEFSLRLLCAAANVGGVI 293
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTE-GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCS 358
GKGG II QIRQESGA IKV SS+++ DDC+ITVS+KEFFED +S TI+A VRLQ RCS
Sbjct: 294 GKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFEDPVSPTIDAAVRLQLRCS 353
Query: 359 EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASED 418
EK + + S+TTRLLV TSRIGCLIGKGGSIITE+RR ++ANIRIL KEN+PK+A+ED
Sbjct: 354 EKSDSELAEQSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAED 413
Query: 419 DEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
+EMVQISG LD+A+ AL+Q+ TRL+AN F+REG++S F V
Sbjct: 414 EEMVQISGGLDVARHALVQIATRLKANFFEREGSLSAFPSVI 455
>gi|255584811|ref|XP_002533123.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223527086|gb|EEF29268.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 405
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/333 (81%), Positives = 299/333 (89%), Gaps = 2/333 (0%)
Query: 128 LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR 187
+ D+DS+GGHQVTA+L+VPSDQIGC+IGKGGQIVQNIRSETGAQIRILKDEHLP CAL
Sbjct: 1 MHSDDDSEGGHQVTARLIVPSDQIGCIIGKGGQIVQNIRSETGAQIRILKDEHLPPCALS 60
Query: 188 SDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIV 247
+DELVQISGE +VVKKAL QIA+RLH+NPSR+QHLL SA+ N + ++GSL+GPT A PIV
Sbjct: 61 TDELVQISGEVAVVKKALYQIATRLHENPSRTQHLLFSAVPNVYPATGSLIGPTGA-PIV 119
Query: 248 GIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
GIAPLM YGGYKGD AGDWSRSLYSAPRD+LSSKEFSLR+VCP NIGGVIGKGG IIN
Sbjct: 120 GIAPLMSTYGGYKGD-AGDWSRSLYSAPRDELSSKEFSLRIVCPTGNIGGVIGKGGTIIN 178
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL 367
QIRQESGA IKVDSS+ EGDDCLITVS+KEFF+D S TIEA +RLQPRCSEKI RDSGL
Sbjct: 179 QIRQESGAVIKVDSSTAEGDDCLITVSAKEFFDDQYSPTIEAAIRLQPRCSEKIARDSGL 238
Query: 368 ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD 427
ISFTTRLLVPTSRIGCL+GKGG II EMR++TKANIRIL K+NLPK+ASEDDEMVQISGD
Sbjct: 239 ISFTTRLLVPTSRIGCLLGKGGVIINEMRKVTKANIRILGKDNLPKVASEDDEMVQISGD 298
Query: 428 LDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
LD+AKDAL V RLRAN FDREGAVSTF+PV
Sbjct: 299 LDVAKDALTHVSRRLRANAFDREGAVSTFLPVL 331
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 97/170 (57%), Gaps = 11/170 (6%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R +CP IG +IG+GG I+ Q+R ++ + I++ + ++ ++TV +A E
Sbjct: 158 RIVCPTGNIGGVIGKGGTIINQIRQESGAVIKVDSSTAEGDDCLITV-------SAKEFF 210
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
D SP +A ++ R +E++ D G T +LLVP+ +IGC++GKGG I+ +
Sbjct: 211 DDQYSPTIEAAIRLQPRC-SEKIARDS---GLISFTTRLLVPTSRIGCLLGKGGVIINEM 266
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
R T A IRIL ++LP A DE+VQISG+ V K AL ++ RL N
Sbjct: 267 RKVTKANIRILGKDNLPKVASEDDEMVQISGDLDVAKDALTHVSRRLRAN 316
>gi|326512112|dbj|BAJ96037.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 541
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 292/461 (63%), Positives = 365/461 (79%), Gaps = 13/461 (2%)
Query: 3 GQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGG 62
G RNS+GKR Q+DY+++G KRR GDD + GP+DTVYRYLC RKIGSIIGRGG
Sbjct: 5 GHRNSHGKR---QSDYSENGGGKRRNPGDD--TYAPGPDDTVYRYLCTSRKIGSIIGRGG 59
Query: 63 EIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDR 122
EI KQLR DT++KIRIGE+VP +ERV+T++S+S ETN ED + V PAQDALF+VH++
Sbjct: 60 EIAKQLRSDTQAKIRIGESVPACDERVITIFSSSRETNTIEDTEDKVCPAQDALFRVHEK 119
Query: 123 VIAEE---LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ ++ + +E+S G QVT +LLVPSDQIGC+IGKGG I+Q IRS+TG+QIR+L +E
Sbjct: 120 LATDDGPVNKENEESLG--QVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSQIRVLSNE 177
Query: 180 HLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVG 239
HLP CA DEL+ I+G+ VV+KAL Q++SRLH NPSRSQHLLAS++ N GS +G
Sbjct: 178 HLPLCATSGDELLLITGDPMVVRKALLQVSSRLHGNPSRSQHLLASSL-NQPFPVGSRLG 236
Query: 240 PTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
++ P+VGI P++ PYG YKGD GDW S+Y R+ S KEFSLRL+C AN+GGVI
Sbjct: 237 SSSTAPVVGITPMVSPYGRYKGDMVGDWP-SIYQPRREVSSPKEFSLRLLCAAANVGGVI 295
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSE 359
GKGG II QIRQESGA IKVDSSS E DDC+ITVS+KEFFED +S TI+A VRLQPRCSE
Sbjct: 296 GKGGGIIKQIRQESGAFIKVDSSSAE-DDCIITVSAKEFFEDPVSPTIDATVRLQPRCSE 354
Query: 360 KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDD 419
KI+ +SG S+TTRLLV TSRIGCLIGKGGSIITE+RR ++ANIRI+ K+++PK+AS+D+
Sbjct: 355 KIDAESGEPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRIISKQDVPKVASDDE 414
Query: 420 EMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
EMV ISGDLD A+ AL+Q+ TRL+AN F+REGA+S F PV
Sbjct: 415 EMVLISGDLDFARHALLQITTRLKANFFEREGALSGFPPVI 455
>gi|224112243|ref|XP_002316129.1| predicted protein [Populus trichocarpa]
gi|222865169|gb|EEF02300.1| predicted protein [Populus trichocarpa]
Length = 553
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 293/480 (61%), Positives = 355/480 (73%), Gaps = 36/480 (7%)
Query: 1 MAGQRNSYGKRS-HSQTDYADHGPNKRRYTGDD-RDQFIIGPEDTVYRYLCPIRKIGSII 58
MAGQRN YGKRS HSQ+DY G KRR GDD DQ I EDTVYRYLCP+RKIGSII
Sbjct: 1 MAGQRNDYGKRSQHSQSDY---GGGKRRNPGDDPSDQNTITNEDTVYRYLCPLRKIGSII 57
Query: 59 GRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFK 118
G+GGEI KQLR D+KS IRI E +PG +ER+VT+YS+S+ETN F + ++V PAQDALF
Sbjct: 58 GKGGEIAKQLRADSKSNIRISEAMPGYDERIVTIYSSSEETNLFGETGEYVCPAQDALFM 117
Query: 119 VHDRVIAEELRG-------DEDSDGG-HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
VHDRVIAE+L ED+ G QVT ++LVP+DQIGCVIGKGGQ++QNIRSET
Sbjct: 118 VHDRVIAEDLNNAAAEEEEGEDNFGEVQQVTVRMLVPADQIGCVIGKGGQVIQNIRSETC 177
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS 230
AQIRI KD+HLP AL DEL+ I GE S V+KAL Q+A+RLH+NPSRSQHL+ S+ +N
Sbjct: 178 AQIRITKDDHLPPLALSIDELLLIHGEPSAVRKALYQVATRLHENPSRSQHLILSSSANV 237
Query: 231 HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVC 290
H G V A P++G+ YG YK G WS S Y RD+ S+KEFSLRLVC
Sbjct: 238 H--GGVFVTANAGAPVLGL------YGNYK----GGWSSSFYPDQRDESSTKEFSLRLVC 285
Query: 291 PVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAV 350
P ANIGGVIGKGG II QIRQES A+IKVDSS EGDDC+I +S+KEFFED S T+ A
Sbjct: 286 PTANIGGVIGKGGGIIKQIRQESRASIKVDSSGAEGDDCIIFISAKEFFEDQ-SPTMNAA 344
Query: 351 VRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKEN 410
+RLQPRCS+K E++SG TTRLLV S+IGCL+GKGG+II+EMR T+ANIRI+ ++N
Sbjct: 345 LRLQPRCSDKTEKESGDSVITTRLLVGRSQIGCLMGKGGAIISEMRNQTRANIRIISEDN 404
Query: 411 LPKIASEDDEM----------VQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
LPK+A EDDEM VQI+G L++A +AL+QV+ RL+ANLF R+GA++ F P
Sbjct: 405 LPKVAVEDDEMVQVNVYNFNSVQITGSLEVASNALLQVILRLKANLFGRDGALTAFPPAL 464
>gi|224098894|ref|XP_002311309.1| predicted protein [Populus trichocarpa]
gi|222851129|gb|EEE88676.1| predicted protein [Populus trichocarpa]
Length = 447
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 272/435 (62%), Positives = 337/435 (77%), Gaps = 19/435 (4%)
Query: 34 DQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVY 93
DQ + EDTVYRYLCP+RKIGSIIG+GGEI KQLR D+KS IRI E +PG +ERVVT++
Sbjct: 1 DQHTVTNEDTVYRYLCPLRKIGSIIGKGGEIAKQLRADSKSNIRISEAMPGYDERVVTIF 60
Query: 94 SASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGG--------HQVTAKLL 145
S+S+ETN FED ++V PAQDALF VHDRVIAE+L ++ QVT ++L
Sbjct: 61 SSSEETNLFEDTGEYVCPAQDALFMVHDRVIAEDLNNAAAAEEEEEDRFGEVQQVTVRML 120
Query: 146 VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKAL 205
VP+DQIGCVIGKGGQ++QNIRSET AQIRI KDEHLP AL +DEL+ I GE SVV+KAL
Sbjct: 121 VPTDQIGCVIGKGGQVIQNIRSETRAQIRITKDEHLPPLALSTDELLLIHGEPSVVRKAL 180
Query: 206 CQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAG 265
Q+A+RLH+NPSRSQHLL S+ +N++ S G V A APL+G YG YKG
Sbjct: 181 YQVATRLHENPSRSQHLLLSSSANTYQSGGMFVTANAG------APLLGLYGNYKGS--- 231
Query: 266 DWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE 325
WS S Y RD+ S+K+FSLRLVCP+ANIGGVIGKGG II QIRQES A+IKVDSS E
Sbjct: 232 -WSSSFYPDQRDEASAKDFSLRLVCPIANIGGVIGKGGGIIKQIRQESRASIKVDSSGAE 290
Query: 326 GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLI 385
G+DC+I +S+KEFFED S T+ A +R+QPRCSEK E++SG TTRLLV S+IGCL+
Sbjct: 291 GNDCIIFISAKEFFEDQ-SPTMNAALRMQPRCSEKTEKESGDSVITTRLLVGRSQIGCLM 349
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRAN 445
GKGG+II+EMR LT+ANIRI+ ++NLPK+A EDDEMVQI+G L++A +AL+QV+ RL+AN
Sbjct: 350 GKGGAIISEMRNLTRANIRIISEDNLPKVAGEDDEMVQITGSLEVASNALLQVILRLKAN 409
Query: 446 LFDREGAVSTFVPVF 460
+F R+GA++TF P
Sbjct: 410 IFGRDGALTTFPPAL 424
>gi|255562910|ref|XP_002522460.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538345|gb|EEF39952.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 559
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 298/483 (61%), Positives = 359/483 (74%), Gaps = 34/483 (7%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRD---------QFIIGPEDTVYRYLCPI 51
MAGQRN YGKRS++Q+DY G +R T DD + Q I EDTVYRYLCP+
Sbjct: 1 MAGQRNDYGKRSNAQSDYG--GGKRRNPTADDGEDSDHQQQQQQHTITNEDTVYRYLCPL 58
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSP 111
RKIGSIIGRGGEI KQLR ++KS IRI E + G EER+VT+YS S+E+N F D +FV P
Sbjct: 59 RKIGSIIGRGGEIAKQLRSESKSNIRISEAMAGFEERIVTIYSNSEESNLFGDSGEFVCP 118
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQ--------------VTAKLLVPSDQIGCVIGK 157
AQDALF VHDR+IAE+L +++ VT ++LVP+DQIGCVIGK
Sbjct: 119 AQDALFMVHDRIIAEDLNNSNNNNEEEDDEEEEEFGESKEQVVTVRMLVPADQIGCVIGK 178
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GGQ++Q+IRSETGAQIRILKDEHLP AL SDEL+ I GE +VV+KAL Q+A+RLH+NPS
Sbjct: 179 GGQVIQSIRSETGAQIRILKDEHLPPLALSSDELLLIIGEPAVVRKALYQVATRLHENPS 238
Query: 218 RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD 277
RSQHLL S+ S + SG G TP G A LMG YG YKG WS S YS RD
Sbjct: 239 RSQHLLLSSSSTNMYQSG---GGMFVTPTAG-ASLMGLYGSYKGG----WSSSYYSDQRD 290
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
+ SSKEFSLRLVCP+ NIGGVIGKGG II QIRQES A+IKVDSS+ EGDDC+I +S+KE
Sbjct: 291 EGSSKEFSLRLVCPIGNIGGVIGKGGGIIKQIRQESRASIKVDSSAAEGDDCIIFISAKE 350
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
FFED SAT+ A +RLQPRCSEK ERDSG TTRLLVP S+IGCL+GKGG+II+EMR
Sbjct: 351 FFEDQ-SATLTAALRLQPRCSEKTERDSGDSVITTRLLVPRSQIGCLMGKGGAIISEMRN 409
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFV 457
+T+A+IRIL ++NLPK+ASEDDEMVQI+G D+A +AL+ V+ RL+ANLF R+GA++ F
Sbjct: 410 VTRASIRILAEDNLPKVASEDDEMVQITGSHDVASNALLHVVLRLKANLFGRDGALTAFP 469
Query: 458 PVF 460
P
Sbjct: 470 PAL 472
>gi|218192926|gb|EEC75353.1| hypothetical protein OsI_11789 [Oryza sativa Indica Group]
Length = 478
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 252/394 (63%), Positives = 324/394 (82%), Gaps = 4/394 (1%)
Query: 68 LRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEE 127
+R DT++KIRIGE+V G +ERV+T++S+S ETN D + V PAQDALF+VH+++ ++
Sbjct: 1 MRADTQAKIRIGESVSGCDERVITIFSSSRETNTLVDAEDKVCPAQDALFRVHEKLSIDD 60
Query: 128 LRGDEDSDGG-HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
G+E+SD G QVT +LLVPSDQIGC+IGKGG I+Q IRS+TGA IR+L +E+LP+CA+
Sbjct: 61 DIGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENLPACAI 120
Query: 187 RSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPI 246
DEL+QISG+++VV+KAL Q++SRLHDNPSRSQHLLAS+++ + GS +G ++ P+
Sbjct: 121 SGDELLQISGDSTVVRKALLQVSSRLHDNPSRSQHLLASSMTQPYPV-GSHLGSSSTAPV 179
Query: 247 VGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAII 306
VGI PL+ YGGYKGD AGDW S+Y R++ S+KEFSLRL+C +N+GGVIGKGG II
Sbjct: 180 VGITPLISSYGGYKGDVAGDWP-SIYQPRREESSAKEFSLRLLCAASNVGGVIGKGGGII 238
Query: 307 NQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSG 366
QIRQESGA IKVDSS+TE DDC+ITVS+KEFFED +S TI A V LQPRCSEK + +S
Sbjct: 239 KQIRQESGAFIKVDSSNTE-DDCIITVSAKEFFEDPVSPTINAAVHLQPRCSEKTDPESA 297
Query: 367 LISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
+ S+TTRLLV TSRIGCLIGKGGSIITE+RR ++ANIRIL KEN+PK+A+ED+EMVQISG
Sbjct: 298 IPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQISG 357
Query: 427 DLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
DLD+ + AL+Q+ TRL+AN F+REGA+S F PV
Sbjct: 358 DLDVVRHALLQITTRLKANFFEREGALSGFPPVI 391
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 82/152 (53%), Gaps = 18/152 (11%)
Query: 67 QLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAE 126
Q+R ++ + I++ + +E+ + SA + FED VSP +A + R
Sbjct: 240 QIRQESGAFIKVDSS--NTEDDCIITVSAKE---FFEDP---VSPTINAAVHLQPRC--- 288
Query: 127 ELRGDEDSDGGHQV---TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPS 183
E +D + T +LLV + +IGC+IGKGG I+ IR + A IRIL E++P
Sbjct: 289 ----SEKTDPESAIPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPK 344
Query: 184 CALRSDELVQISGEASVVKKALCQIASRLHDN 215
A +E+VQISG+ VV+ AL QI +RL N
Sbjct: 345 VAAEDEEMVQISGDLDVVRHALLQITTRLKAN 376
>gi|297849822|ref|XP_002892792.1| hypothetical protein ARALYDRAFT_471578 [Arabidopsis lyrata subsp.
lyrata]
gi|297338634|gb|EFH69051.1| hypothetical protein ARALYDRAFT_471578 [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 245/450 (54%), Positives = 321/450 (71%), Gaps = 31/450 (6%)
Query: 5 RNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEI 64
RN +GKRS+ Q++ +G +KRR DD DQ +IG E+TVYRYLCP++K GSIIG+GG+I
Sbjct: 6 RNIHGKRSNLQSELTGNGGSKRRNLHDDTDQNVIGSEETVYRYLCPVKKTGSIIGKGGDI 65
Query: 65 VKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVI 124
KQ+R +TKS +RI E +PG EERVVT+YS ++E N F D + V PA DALFKVHD V+
Sbjct: 66 AKQIRSETKSNMRINEALPGCEERVVTIYSTNEELNHFGDDGELVCPALDALFKVHDMVV 125
Query: 125 AEELRGDEDSD---GGHQ-VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
A+ D + D G Q VT ++LVPSDQIGCVIGKGGQ++QN+R++T AQIR++KD H
Sbjct: 126 ADIDHDDGNDDDDLGEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIKD-H 184
Query: 181 LPSCA--LRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLV 238
LPSCA L DEL+QI GE VV++AL Q+AS LH NPSR QHLL S+ S+ H G+++
Sbjct: 185 LPSCALTLSHDELLQIIGEPLVVREALYQVASLLHANPSRFQHLLLSSSSSMH-QPGAML 243
Query: 239 GPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGV 298
A T S Y+ RD ++EF + +CP N+GGV
Sbjct: 244 MSAALTS----------------------SHRNYAVRRDIADAREFCVCFICPAENVGGV 281
Query: 299 IGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCS 358
IGKGG INQIRQE+GA I+V++S T+ DDC+I +SSKEF+ED S + A +RLQ RCS
Sbjct: 282 IGKGGGFINQIRQETGATIRVNTSETDEDDCIIVISSKEFYEDQ-SPAVNAAIRLQQRCS 340
Query: 359 EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASED 418
EK+ +D+ ++ +TRLLV +S+IGCLIGKGG++I+EMR +T+ANIRIL KE++PKIA ED
Sbjct: 341 EKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIARED 400
Query: 419 DEMVQISGDLDLAKDALIQVMTRLRANLFD 448
+EMVQI+G+ D A AL QV+ RLRAN FD
Sbjct: 401 EEMVQITGNPDAAMKALTQVILRLRANSFD 430
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 97/177 (54%), Gaps = 12/177 (6%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGD 106
++CP +G +IG+GG + Q+R +T + IR+ T E+ + V S+ + +ED
Sbjct: 271 FICPAENVGGVIGKGGGFINQIRQETGATIRVN-TSETDEDDCIIVISSKE---FYEDQ- 325
Query: 107 KFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIR 166
SPA +A ++ R E G + +D ++ +LLV S QIGC+IGKGG ++ +R
Sbjct: 326 ---SPAVNAAIRLQQR--CSEKVGKDANDLA--ISTRLLVSSSQIGCLIGKGGAVISEMR 378
Query: 167 SETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLL 223
S T A IRIL+ E +P A +E+VQI+G KAL Q+ RL N H L
Sbjct: 379 SVTRANIRILQKEDVPKIAREDEEMVQITGNPDAAMKALTQVILRLRANSFDMDHGL 435
>gi|186478468|ref|NP_001117282.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|5080792|gb|AAD39302.1|AC007576_25 Unknown protein [Arabidopsis thaliana]
gi|332190995|gb|AEE29116.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 479
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 244/451 (54%), Positives = 320/451 (70%), Gaps = 31/451 (6%)
Query: 5 RNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEI 64
RN +GKRS+ Q+++ +G +KRR D+ DQ +I EDTVYRYLCP++K GSIIG+GGEI
Sbjct: 6 RNIHGKRSNLQSEFTGNGGSKRRNLHDETDQNVIASEDTVYRYLCPVKKTGSIIGKGGEI 65
Query: 65 VKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVI 124
KQ+R +TKS +RI E +PG EERVVT+YS ++E N F D + V PA DALFKVHD V+
Sbjct: 66 AKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNHFGDDGELVCPALDALFKVHDMVV 125
Query: 125 AEELRGDEDSD----GGHQ-VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
A+ + D D G Q VT ++LVPSDQIGCVIGKGGQ++QN+R++T AQIR++KD
Sbjct: 126 ADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIKD- 184
Query: 180 HLPSCA--LRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSL 237
HLP+CA L DEL+ I GE VV++AL Q+AS LHDNPSR QHLL S+ S+S G++
Sbjct: 185 HLPACALTLSHDELLLIIGEPLVVREALYQVASLLHDNPSRFQHLLLSSSSSSMHQPGAM 244
Query: 238 VGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGG 297
+ A T S Y+ RD ++EF + +CP N+GG
Sbjct: 245 LMSAALTS----------------------SHRNYAVRRDIADAREFCVCFICPAENVGG 282
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
VIGKGG INQIRQE+GA I+V++S T+ DDC+I +SSKEF+ED S + A +RLQ RC
Sbjct: 283 VIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQ-SPAVNAAIRLQQRC 341
Query: 358 SEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASE 417
SEK+ +D+ ++ +TRLLV +S+IGCLIGKGG++I+EMR +T+ANIRIL KE++PKIA E
Sbjct: 342 SEKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIARE 401
Query: 418 DDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
D+EMVQI+G D A AL QV+ RLRAN FD
Sbjct: 402 DEEMVQITGSPDAAMKALTQVILRLRANSFD 432
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 95/175 (54%), Gaps = 12/175 (6%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGD 106
++CP +G +IG+GG + Q+R +T + IR+ + ++ ++ + S +ED
Sbjct: 273 FICPAENVGGVIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFISSKE----FYEDQ- 327
Query: 107 KFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIR 166
SPA +A ++ R E G + +D ++ +LLV S QIGC+IGKGG ++ +R
Sbjct: 328 ---SPAVNAAIRLQQR--CSEKVGKDANDLA--ISTRLLVSSSQIGCLIGKGGAVISEMR 380
Query: 167 SETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
S T A IRIL+ E +P A +E+VQI+G KAL Q+ RL N H
Sbjct: 381 SVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKALTQVILRLRANSFDMDH 435
>gi|110224788|emb|CAL07994.1| putative nucleic acid binding protein [Platanus x acerifolia]
Length = 288
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/270 (75%), Positives = 237/270 (87%)
Query: 189 DELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVG 248
DEL+QI+GEASVVKKAL QI++RLHDNPSRSQHLL SA+SN+H S GSL GP A PIVG
Sbjct: 1 DELLQITGEASVVKKALYQISTRLHDNPSRSQHLLTSAMSNAHQSGGSLTGPNAGAPIVG 60
Query: 249 IAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQ 308
+APLMGPYGGYKGDT +W + Y APRD +S+KEFSLRLVCP NIGGVIGKGG++I Q
Sbjct: 61 LAPLMGPYGGYKGDTGSEWPNAFYPAPRDSVSAKEFSLRLVCPTGNIGGVIGKGGSVIKQ 120
Query: 309 IRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLI 368
IRQESGA IKVDSS+ E DDC+I++SSKEFFED +S TI+A VRLQP+CSEK +R+SG
Sbjct: 121 IRQESGAFIKVDSSAAEADDCIISISSKEFFEDPISPTIDAAVRLQPKCSEKSDRESGDS 180
Query: 369 SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL 428
+FTTRLLVPTSRIGCLIGKGGSII+EMR++TKANIRIL KENLPK+ASEDDEMVQI+GDL
Sbjct: 181 TFTTRLLVPTSRIGCLIGKGGSIISEMRKVTKANIRILSKENLPKVASEDDEMVQITGDL 240
Query: 429 DLAKDALIQVMTRLRANLFDREGAVSTFVP 458
D+A++ALIQV TRL+ N F+REGA+S F P
Sbjct: 241 DVARNALIQVTTRLKTNFFEREGALSAFPP 270
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 108/198 (54%), Gaps = 21/198 (10%)
Query: 28 YTGDD----RDQFIIGPEDTV------YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIR 77
Y GD + F P D+V R +CP IG +IG+GG ++KQ+R ++ + I+
Sbjct: 71 YKGDTGSEWPNAFYPAPRDSVSAKEFSLRLVCPTGNIGGVIGKGGSVIKQIRQESGAFIK 130
Query: 78 IGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGG 137
+ + +++ ++++ S FED +SP DA ++ + + R DS
Sbjct: 131 VDSSAAEADDCIISISS----KEFFEDP---ISPTIDAAVRLQPKCSEKSDRESGDS--- 180
Query: 138 HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGE 197
T +LLVP+ +IGC+IGKGG I+ +R T A IRIL E+LP A DE+VQI+G+
Sbjct: 181 -TFTTRLLVPTSRIGCLIGKGGSIISEMRKVTKANIRILSKENLPKVASEDDEMVQITGD 239
Query: 198 ASVVKKALCQIASRLHDN 215
V + AL Q+ +RL N
Sbjct: 240 LDVARNALIQVTTRLKTN 257
>gi|297814608|ref|XP_002875187.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321025|gb|EFH51446.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/444 (52%), Positives = 304/444 (68%), Gaps = 36/444 (8%)
Query: 28 YTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEE 87
Y+ + D G EDTVYRYLCP+RK GSIIGRGGEI KQ+R +TK+ +RI E +PG +E
Sbjct: 3 YSRNIYDNNGAGLEDTVYRYLCPVRKAGSIIGRGGEIAKQIRSETKANMRINEALPGCDE 62
Query: 88 RVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ------VT 141
RVVT+YS S+ETN ED + FV PA DALFKVHD ++AEE D D D G + VT
Sbjct: 63 RVVTIYSNSEETNRIEDDEDFVCPAFDALFKVHDMIVAEEFDNDGDYDNGDEYSERQTVT 122
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL--RSDELVQISGEAS 199
++LVPSDQIGC+IGKGGQ++Q +R++T AQIR++ D +LP CAL DEL+QI G+ S
Sbjct: 123 VRMLVPSDQIGCLIGKGGQVIQKLRNDTNAQIRVIND-NLPICALALSHDELLQIIGDPS 181
Query: 200 VVKKALCQIASRLHDNPSRSQ-HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGG 258
V++AL Q+A L+DNPSR Q + L+S+ + H G L+ P +
Sbjct: 182 AVREALYQVAFLLYDNPSRFQNYFLSSSSTLQHQPGGILMSPAITS-------------- 227
Query: 259 YKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIK 318
S YSAPRD ++ FS+ +CP N+GGVIGKGG INQ RQESGA IK
Sbjct: 228 ---------SHKNYSAPRDAADARVFSICFICPAENVGGVIGKGGCFINQTRQESGATIK 278
Query: 319 VDSSST-EGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVP 377
V + T E DDC+I +S+KEFFED S T+ A +RLQ RCSEK+ +DS + +TR+L+P
Sbjct: 279 VHTPETDEDDDCIIFISAKEFFEDQ-SPTVNAALRLQTRCSEKVGKDSSDSAISTRVLIP 337
Query: 378 TSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQ 437
+S++GCLIGKGG++I+EMR +TKANIRI E++P+IA E++EMVQI+G LD A AL Q
Sbjct: 338 SSQVGCLIGKGGALISEMRSVTKANIRIFQGEDVPRIARENEEMVQITGSLDAAIKALTQ 397
Query: 438 VMTRLRANLFDREGAVSTFVPVFL 461
VM RLRAN+FD + + +P F
Sbjct: 398 VMLRLRANVFDMDRGL-VLLPTFF 420
>gi|30683629|ref|NP_172869.2| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|30102666|gb|AAP21251.1| At1g14170 [Arabidopsis thaliana]
gi|110743444|dbj|BAE99608.1| hypothetical protein [Arabidopsis thaliana]
gi|332190993|gb|AEE29114.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 454
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 232/422 (54%), Positives = 300/422 (71%), Gaps = 31/422 (7%)
Query: 34 DQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVY 93
DQ +I EDTVYRYLCP++K GSIIG+GGEI KQ+R +TKS +RI E +PG EERVVT+Y
Sbjct: 10 DQNVIASEDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMY 69
Query: 94 SASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD----GGHQ-VTAKLLVPS 148
S ++E N F D + V PA DALFKVHD V+A+ + D D G Q VT ++LVPS
Sbjct: 70 STNEELNHFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPS 129
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL--RSDELVQISGEASVVKKALC 206
DQIGCVIGKGGQ++QN+R++T AQIR++KD HLP+CAL DEL+ I GE VV++AL
Sbjct: 130 DQIGCVIGKGGQVIQNLRNDTNAQIRVIKD-HLPACALTLSHDELLLIIGEPLVVREALY 188
Query: 207 QIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGD 266
Q+AS LHDNPSR QHLL S+ S+S G+++ A T
Sbjct: 189 QVASLLHDNPSRFQHLLLSSSSSSMHQPGAMLMSAALTS--------------------- 227
Query: 267 WSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
S Y+ RD ++EF + +CP N+GGVIGKGG INQIRQE+GA I+V++S T+
Sbjct: 228 -SHRNYAVRRDIADAREFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNTSETDD 286
Query: 327 DDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIG 386
DDC+I +SSKEF+ED S + A +RLQ RCSEK+ +D+ ++ +TRLLV +S+IGCLIG
Sbjct: 287 DDCIIFISSKEFYEDQ-SPAVNAAIRLQQRCSEKVGKDANDLAISTRLLVSSSQIGCLIG 345
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
KGG++I+EMR +T+ANIRIL KE++PKIA ED+EMVQI+G D A AL QV+ RLRAN
Sbjct: 346 KGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKALTQVILRLRANS 405
Query: 447 FD 448
FD
Sbjct: 406 FD 407
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 95/175 (54%), Gaps = 12/175 (6%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGD 106
++CP +G +IG+GG + Q+R +T + IR+ + ++ ++ + S +ED
Sbjct: 248 FICPAENVGGVIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFISSKE----FYEDQ- 302
Query: 107 KFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIR 166
SPA +A ++ R E G + +D ++ +LLV S QIGC+IGKGG ++ +R
Sbjct: 303 ---SPAVNAAIRLQQR--CSEKVGKDANDLA--ISTRLLVSSSQIGCLIGKGGAVISEMR 355
Query: 167 SETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
S T A IRIL+ E +P A +E+VQI+G KAL Q+ RL N H
Sbjct: 356 SVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKALTQVILRLRANSFDMDH 410
>gi|79317957|ref|NP_001031044.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|222424209|dbj|BAH20063.1| AT1G14170 [Arabidopsis thaliana]
gi|332190994|gb|AEE29115.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 446
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 228/415 (54%), Positives = 295/415 (71%), Gaps = 31/415 (7%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
DTVYRYLCP++K GSIIG+GGEI KQ+R +TKS +RI E +PG EERVVT+YS ++E N
Sbjct: 9 HDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELN 68
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD----GGHQ-VTAKLLVPSDQIGCVI 155
F D + V PA DALFKVHD V+A+ + D D G Q VT ++LVPSDQIGCVI
Sbjct: 69 HFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVI 128
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCAL--RSDELVQISGEASVVKKALCQIASRLH 213
GKGGQ++QN+R++T AQIR++KD HLP+CAL DEL+ I GE VV++AL Q+AS LH
Sbjct: 129 GKGGQVIQNLRNDTNAQIRVIKD-HLPACALTLSHDELLLIIGEPLVVREALYQVASLLH 187
Query: 214 DNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
DNPSR QHLL S+ S+S G+++ A T S Y+
Sbjct: 188 DNPSRFQHLLLSSSSSSMHQPGAMLMSAALTS----------------------SHRNYA 225
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
RD ++EF + +CP N+GGVIGKGG INQIRQE+GA I+V++S T+ DDC+I +
Sbjct: 226 VRRDIADAREFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFI 285
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
SSKEF+ED S + A +RLQ RCSEK+ +D+ ++ +TRLLV +S+IGCLIGKGG++I+
Sbjct: 286 SSKEFYEDQ-SPAVNAAIRLQQRCSEKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVIS 344
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
EMR +T+ANIRIL KE++PKIA ED+EMVQI+G D A AL QV+ RLRAN FD
Sbjct: 345 EMRSVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKALTQVILRLRANSFD 399
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 95/175 (54%), Gaps = 12/175 (6%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGD 106
++CP +G +IG+GG + Q+R +T + IR+ + ++ ++ + S +ED
Sbjct: 240 FICPAENVGGVIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFISSKE----FYEDQ- 294
Query: 107 KFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIR 166
SPA +A ++ R E G + +D ++ +LLV S QIGC+IGKGG ++ +R
Sbjct: 295 ---SPAVNAAIRLQQR--CSEKVGKDANDLA--ISTRLLVSSSQIGCLIGKGGAVISEMR 347
Query: 167 SETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
S T A IRIL+ E +P A +E+VQI+G KAL Q+ RL N H
Sbjct: 348 SVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKALTQVILRLRANSFDMDH 402
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 38 IGPEDTV-YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
+G + TV R L P +IG +IG+GG++++ LR DT ++IR+
Sbjct: 107 LGEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRV 148
>gi|118485588|gb|ABK94645.1| unknown [Populus trichocarpa]
Length = 294
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 166/208 (79%), Positives = 186/208 (89%), Gaps = 2/208 (0%)
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
MGPYGG+KGDT GDWSRSLYSAPRD+L+SKEFSLR+VCP ANIG VIGKGG IINQIRQE
Sbjct: 1 MGPYGGFKGDT-GDWSRSLYSAPRDELASKEFSLRVVCPTANIGAVIGKGGTIINQIRQE 59
Query: 313 SGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT 372
SGA IKVDSS EGDDCLIT+S+KE + D S TIEA VRLQPRCSEK+ERDSGLISFTT
Sbjct: 60 SGATIKVDSSVAEGDDCLITISAKEIY-DHYSPTIEAAVRLQPRCSEKMERDSGLISFTT 118
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAK 432
RLLVP+SRIGCL+GKGG+II EMR+LTKA IRI KENLPK+AS+DDEMVQI+GDLD+AK
Sbjct: 119 RLLVPSSRIGCLLGKGGAIIDEMRKLTKAIIRIPRKENLPKVASDDDEMVQIAGDLDVAK 178
Query: 433 DALIQVMTRLRANLFDREGAVSTFVPVF 460
DALIQ+ RLRAN+FDREGA+S +PV
Sbjct: 179 DALIQISRRLRANVFDREGAMSAILPVL 206
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 107/193 (55%), Gaps = 18/193 (9%)
Query: 29 TGDDRDQFIIGPEDTV------YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
TGD P D + R +CP IG++IG+GG I+ Q+R ++ + I++ +V
Sbjct: 11 TGDWSRSLYSAPRDELASKEFSLRVVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSV 70
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
++ ++T+ +A E D + SP +A ++ R +E++ E G T
Sbjct: 71 AEGDDCLITI-------SAKEIYDHY-SPTIEAAVRLQPRC-SEKM---ERDSGLISFTT 118
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
+LLVPS +IGC++GKGG I+ +R T A IRI + E+LP A DE+VQI+G+ V K
Sbjct: 119 RLLVPSSRIGCLLGKGGAIIDEMRKLTKAIIRIPRKENLPKVASDDDEMVQIAGDLDVAK 178
Query: 203 KALCQIASRLHDN 215
AL QI+ RL N
Sbjct: 179 DALIQISRRLRAN 191
>gi|302767378|ref|XP_002967109.1| hypothetical protein SELMODRAFT_87147 [Selaginella moellendorffii]
gi|300165100|gb|EFJ31708.1| hypothetical protein SELMODRAFT_87147 [Selaginella moellendorffii]
Length = 506
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 203/472 (43%), Positives = 287/472 (60%), Gaps = 57/472 (12%)
Query: 1 MAGQRNSYGKRSHSQ--TDYADHGPNKRRYTGDDRDQFIIGP--EDTVYRYLCPIRKIGS 56
M G R ++ KRSHSQ D D +RR G +R P +D VYR LCP KIGS
Sbjct: 1 MEGARYAH-KRSHSQFEEDSVDRSVRQRRRGGFERTPEAAAPPVDDVVYRILCPGAKIGS 59
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFE--------DGDK- 107
+IG+GG I+K LR +T +KI++ + +PGS+ERV+ + ++ E + D DK
Sbjct: 60 VIGKGGSIIKSLRNETGAKIKVADGIPGSDERVIFISASPRERREGKPRGGSKEMDKDKE 119
Query: 108 -------FVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
+ +Q+ALFKV R++ E DED D VTA+LLVPS+QIGC++GK G+
Sbjct: 120 QNGEESTPLPASQEALFKVFARIVEGEEF-DEDEDSSRNVTARLLVPSNQIGCLLGKAGK 178
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
I++ +R E+GAQIR+L E LP CA +DELVQ++GE ++VKKAL I++RL+DNP R +
Sbjct: 179 IIEQMRVESGAQIRVLPREQLPKCAYHTDELVQLTGELALVKKALTTISTRLYDNPPRDK 238
Query: 221 HLLASAISNSHSSS---GSLVGPTAATPI--VGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
A + S+ G+L+ P A P IAP+ G
Sbjct: 239 PPQAGHLGPFQESTILPGTLLPPGAFFPQGNASIAPVEG--------------------- 277
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
EF++RL+CP IG VIGKGG II IR+E+ A IK+ + ++ +I ++S
Sbjct: 278 -------EFAVRLLCPNEKIGSVIGKGGMIIRSIREETCARIKIADAVANAEERVIHITS 330
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
E + +S +EAV++LQ R S+ G + TTR LVP++ IGCL+GK GSII +M
Sbjct: 331 NEVLHEQVSPALEAVLQLQSRISDPSAEKDG--AMTTRFLVPSANIGCLLGKKGSIIADM 388
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
RR T+ANIR+L KE LPK A EDDE+VQ+ GD+ +A+DA+I+++TRLRAN+F
Sbjct: 389 RRNTRANIRVLSKEALPKCAHEDDELVQVVGDITVARDAVIEIITRLRANIF 440
>gi|168013158|ref|XP_001759268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689581|gb|EDQ75952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 427
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 188/433 (43%), Positives = 277/433 (63%), Gaps = 27/433 (6%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYS---ASD 97
+D V+R LCP KIGS+IG+GG I+K LR ++ +KI+I + +PG +ERV+ + S +D
Sbjct: 1 DDVVFRILCPAPKIGSVIGKGGSIIKTLRQESGAKIKIADAIPGVDERVILISSTDRGND 60
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAE-ELRG----DEDSDGGHQVTAKLLVPSDQIG 152
+ + ++PAQ+ALFKVH R+IA+ E G D++ + QV +LLVP++QIG
Sbjct: 61 RGRGKDGNSEELTPAQEALFKVHARIIADVETSGIDGSDQEEEPSQQVVTRLLVPNNQIG 120
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
C++GKGG+I++ +R TGAQIR+L + LP CAL +DELVQ+SG+ S +KKAL I++RL
Sbjct: 121 CLLGKGGKIIEQMRQTTGAQIRVLPKDQLPGCALPTDELVQVSGDVSTLKKALLFISARL 180
Query: 213 HDNPSRS--QHLLASAIS----------NSHSSSGSLVGPTAATPIVGIAPLMG-PYGGY 259
+NP R Q A A + +S+ S G T +G PL G +
Sbjct: 181 QENPPRDRPQSYAAPAPAFVPVTDYLAKDSYRSKG-----TGHVFGLGPEPLEGRSWTIS 235
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
G+ + D + S D E RL+CP IG VIGKGG+II+ +R+++GA IK+
Sbjct: 236 SGNLSLDRQDNRRSKEGRDSGENELVFRLLCPSDKIGSVIGKGGSIIHNLRKDTGARIKI 295
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTS 379
++ D+ +I VS+ E D+ S +EA++++Q R + ++ D I TTRLLVPT+
Sbjct: 296 ANAVPGSDERVIIVSALELPGDSFSPALEAMIQVQSRITAEMGGDKDGI-ITTRLLVPTN 354
Query: 380 RIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVM 439
+IGCL+GKGGSII +MRR T+ANIR+LPK+ LP+ A + DE+VQI GD +A++AL QV+
Sbjct: 355 QIGCLLGKGGSIIEDMRRATRANIRVLPKDTLPRCALDTDELVQIVGDTTVAREALFQVI 414
Query: 440 TRLRANLFDREGA 452
+RLR N F G+
Sbjct: 415 SRLRNNAFRESGS 427
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 128/200 (64%), Gaps = 19/200 (9%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
D N+R G D G + V+R LCP KIGS+IG+GG I+ LR DT ++I+I
Sbjct: 242 DRQDNRRSKEGRDS-----GENELVFRLLCPSDKIGSVIGKGGSIIHNLRKDTGARIKIA 296
Query: 80 ETVPGSEERVVTVYSASDETNAFE-DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH 138
VPGS+ERV+ V +A E GD F SPA +A+ +V R+ A E+ GD+D
Sbjct: 297 NAVPGSDERVIIV-------SALELPGDSF-SPALEAMIQVQSRITA-EMGGDKDG---- 343
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
+T +LLVP++QIGC++GKGG I++++R T A IR+L + LP CAL +DELVQI G+
Sbjct: 344 IITTRLLVPTNQIGCLLGKGGSIIEDMRRATRANIRVLPKDTLPRCALDTDELVQIVGDT 403
Query: 199 SVVKKALCQIASRLHDNPSR 218
+V ++AL Q+ SRL +N R
Sbjct: 404 TVAREALFQVISRLRNNAFR 423
>gi|224077694|ref|XP_002305366.1| predicted protein [Populus trichocarpa]
gi|222848330|gb|EEE85877.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 160/208 (76%), Positives = 180/208 (86%), Gaps = 1/208 (0%)
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
MGPYG +KGDT GDWSRSLYSAPRD+L+SKEFSLR+VCP ANIG VIGKGG IINQIRQE
Sbjct: 1 MGPYGSFKGDT-GDWSRSLYSAPRDELASKEFSLRMVCPTANIGAVIGKGGTIINQIRQE 59
Query: 313 SGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT 372
SGA IKVDSS++EGDDCLIT+S+KE +D S TIEA +RLQPRCSEK+ERDSGL SFTT
Sbjct: 60 SGATIKVDSSASEGDDCLITISAKEICDDQYSPTIEAALRLQPRCSEKMERDSGLFSFTT 119
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAK 432
RLLVP+S IGCL+GKGG II EMR+LTKA IRI K+ LPK A +DDEMVQISGDLD+AK
Sbjct: 120 RLLVPSSHIGCLLGKGGLIIDEMRKLTKAIIRIPRKDKLPKTALDDDEMVQISGDLDIAK 179
Query: 433 DALIQVMTRLRANLFDREGAVSTFVPVF 460
DALIQ+ RLRAN FDREG +S +PVF
Sbjct: 180 DALIQISRRLRANAFDREGLMSAILPVF 207
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 110/205 (53%), Gaps = 17/205 (8%)
Query: 29 TGDDRDQFIIGPEDTV------YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
TGD P D + R +CP IG++IG+GG I+ Q+R ++ + I++ +
Sbjct: 11 TGDWSRSLYSAPRDELASKEFSLRMVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSA 70
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
++ ++T+ +A E D SP +A ++ R +E++ D G T
Sbjct: 71 SEGDDCLITI-------SAKEICDDQYSPTIEAALRLQPRC-SEKMERDS---GLFSFTT 119
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
+LLVPS IGC++GKGG I+ +R T A IRI + + LP AL DE+VQISG+ + K
Sbjct: 120 RLLVPSSHIGCLLGKGGLIIDEMRKLTKAIIRIPRKDKLPKTALDDDEMVQISGDLDIAK 179
Query: 203 KALCQIASRLHDNPSRSQHLLASAI 227
AL QI+ RL N + L+++ +
Sbjct: 180 DALIQISRRLRANAFDREGLMSAIL 204
>gi|302754958|ref|XP_002960903.1| hypothetical protein SELMODRAFT_73985 [Selaginella moellendorffii]
gi|300171842|gb|EFJ38442.1| hypothetical protein SELMODRAFT_73985 [Selaginella moellendorffii]
Length = 502
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 201/470 (42%), Positives = 281/470 (59%), Gaps = 57/470 (12%)
Query: 1 MAGQRNSYGKRSHSQ--TDYADHGPNKRRYTGDDRDQFIIGP--EDTVYRYLCPIRKIGS 56
M G R ++ KRSHSQ D D +RR G +R P +D VYR LCP KIGS
Sbjct: 1 MEGARYAH-KRSHSQFEEDSVDRSVRQRRRGGFERTPEAAAPPVDDVVYRILCPGAKIGS 59
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVS------ 110
+IG+GG I+K LR +T +KI++ + +PGS+ERV+ + G K +
Sbjct: 60 VIGKGGSIIKSLRNETGAKIKVADGIPGSDERVIFISPRERREGKPRGGSKEMDKDKEQN 119
Query: 111 -------PA-QDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIV 162
PA Q+ALFKV R++ E DED D VTA+LLVPS+QIGC++GK G+I+
Sbjct: 120 GEESTPLPASQEALFKVFARIVEGEEF-DEDEDSSRNVTARLLVPSNQIGCLLGKAGKII 178
Query: 163 QNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
+ +R E+GAQIR+L E LP CA +DEL ++GE ++VKKAL I++RL+DNP R +
Sbjct: 179 EQMRVESGAQIRVLPREQLPKCAYHTDEL--LTGELALVKKALTTISTRLYDNPPRDKPP 236
Query: 223 LASAISNSHSSS---GSLVGPTAATPI--VGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD 277
A + S+ G+L+ P A P IAP+ G
Sbjct: 237 QAGHLGPFQESTILPGTLLPPGAFFPQGNASIAPVEG----------------------- 273
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
EF++RL+CP IG VIGKGG II IR+E+ A IK+ + ++ +I ++S E
Sbjct: 274 -----EFAVRLLCPNEKIGSVIGKGGMIIRSIREETCARIKIADAVANAEERVIHITSNE 328
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
+ +S +EAV++LQ R S+ G + TTR LVP++ IGCL+GK GSII +MRR
Sbjct: 329 VLHEQVSPALEAVLQLQSRISDPSAEKDG--AMTTRFLVPSANIGCLLGKKGSIIADMRR 386
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
T+ANIR+L KE LPK A EDDE+VQ+ GD+ +A+DA+I+++TRLRAN+F
Sbjct: 387 NTRANIRVLSKEALPKCAHEDDELVQVVGDITVARDAVIEIITRLRANIF 436
>gi|148905782|gb|ABR16055.1| unknown [Picea sitchensis]
Length = 650
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 198/482 (41%), Positives = 298/482 (61%), Gaps = 38/482 (7%)
Query: 9 GKRSHSQTDYADHGP-NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQ 67
GKR+ ++ D A++ NKRR +G R+Q + G + TVYR LCP IGS+IG+GG+++K
Sbjct: 7 GKRTRTEHDLAENNDRNKRRNSGTGREQTMPGADSTVYRILCPSNVIGSVIGKGGKVIKS 66
Query: 68 LRIDTKSKIRIGETVPGSEERVVTVYSA------SDETNAFEDGDKFVSPAQDALFKVHD 121
+R +T+SKIR+ + VPG +ERV+ ++S+ + + ++ ++ V PAQD L +VH
Sbjct: 67 MRQETRSKIRVADAVPGVDERVIVIFSSPLSKDKEKDDDDDDNENEPVCPAQDGLLRVHS 126
Query: 122 RVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL 181
++ E D D+D A+LLV + QIG +IGKGG +Q +RSE+GAQI+I + + L
Sbjct: 127 VIVQESSGKDNDADKKRPQDARLLVANSQIGSLIGKGGNNIQKLRSESGAQIQIPRKDEL 186
Query: 182 PSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ----HLLASAISNSHSSSGSL 237
P CA DELV ISG+A+ VKKAL +++ L +P + Q +L +S SG
Sbjct: 187 PGCAFSFDELVVISGDAAAVKKALYAVSAFLFKHPPKEQIPWSVILPETNQSSLPPSGVP 246
Query: 238 VGPTA---------------ATPIVGIAPLMGPYGGYKGDTAGDW--------SRSLYSA 274
P A + PI+G A + GGY + W S S +
Sbjct: 247 TFPPANYLPQGDSLFGHHNLSAPILGYASRLPGLGGYGSEAGSAWPLSNPALPSFSKFGN 306
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
+S+EFS+R++CP IGGVIGKGG I +R ++GA+I+V+ + TE D+ +I VS
Sbjct: 307 STTKKTSEEFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTESDERVIVVS 366
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITE 394
+ E +D +S TIEAV+ LQ + S ++D + +TR LVP+ IGCL+GKGG+II+E
Sbjct: 367 ATELADDRVSPTIEAVLLLQGKTSGTTDKDGAI---STRFLVPSKHIGCLLGKGGNIISE 423
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF-DREGAV 453
MR+ T+ANIRI K+ P SE++E+VQ++G+ +AKDALIQ++ RLR N+F D++GA
Sbjct: 424 MRKQTRANIRIFRKDERPICVSENEELVQVTGEPGVAKDALIQILKRLRENIFKDKDGAS 483
Query: 454 ST 455
+T
Sbjct: 484 NT 485
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 162/331 (48%), Gaps = 63/331 (19%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+ R LCP KIG +IG+GG +K +R DT + IR+ + S+ERV+ V +
Sbjct: 314 EEFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTESDERVIVV-------S 366
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A E D VSP +A+ + + G D DG ++ + LVPS IGC++GKGG
Sbjct: 367 ATELADDRVSPTIEAVLLLQGKT-----SGTTDKDGA--ISTRFLVPSKHIGCLLGKGGN 419
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN----- 215
I+ +R +T A IRI + + P C ++ELVQ++GE V K AL QI RL +N
Sbjct: 420 IISEMRKQTRANIRIFRKDERPICVSENEELVQVTGEPGVAKDALIQILKRLRENIFKDK 479
Query: 216 --PSRSQHLL---------ASAISNSH--------SSSGSLVGPTAATPIVGIAPLMGPY 256
S + +L A +S+S+ S G++ G +AA + G L
Sbjct: 480 DGASNTDSVLPLSSLSVPSAVPLSSSYGTRKYDIVSPRGAIAGRSAAG-LSGFGALQAGT 538
Query: 257 GGYK-------------GDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGG 303
G Y G + G + SL AP S EF++ P + + V+G+GG
Sbjct: 539 GSYASLQPYAPTRTFGIGLSGGHLNSSL--AP-----SHEFAI----PNSAVSSVLGRGG 587
Query: 304 AIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
+ I+ IR+ SGA +K+ T D ++ +S
Sbjct: 588 SNISHIREISGATVKLRDPITGASDRVVEIS 618
>gi|388511497|gb|AFK43810.1| unknown [Lotus japonicus]
Length = 279
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 153/190 (80%), Positives = 177/190 (93%)
Query: 271 LYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCL 330
+YSAPRD+ S +EFS+R+VCP NIGGVIGKGGAIINQIRQ+SGA IKVDSS+TEGDDCL
Sbjct: 1 MYSAPRDEGSMREFSVRVVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCL 60
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGS 390
I +S+KEFF+D+ S TIEA VRLQPRCS+K+ERDSG++SFTTRLLVP+SRIGCLIGKGG+
Sbjct: 61 IAISTKEFFDDSFSPTIEAAVRLQPRCSDKVERDSGIVSFTTRLLVPSSRIGCLIGKGGT 120
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDRE 450
IITEMRRLTKANIRILPKE+LPKIASEDDEMVQISGDLD+AKDAL+QV+TRL+ANLFD+E
Sbjct: 121 IITEMRRLTKANIRILPKEDLPKIASEDDEMVQISGDLDVAKDALVQVLTRLKANLFDKE 180
Query: 451 GAVSTFVPVF 460
AV F+PV
Sbjct: 181 RAVPGFLPVM 190
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 94/170 (55%), Gaps = 11/170 (6%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R +CP IG +IG+GG I+ Q+R D+ + I++ + ++ ++ + T F D
Sbjct: 17 RVVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIAI-----STKEFFD- 70
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
D F SP +A ++ R + E G T +LLVPS +IGC+IGKGG I+ +
Sbjct: 71 DSF-SPTIEAAVRLQPRCSDKV----ERDSGIVSFTTRLLVPSSRIGCLIGKGGTIITEM 125
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
R T A IRIL E LP A DE+VQISG+ V K AL Q+ +RL N
Sbjct: 126 RRLTKANIRILPKEDLPKIASEDDEMVQISGDLDVAKDALVQVLTRLKAN 175
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 138 HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
+ + +++ P+ IG VIGKGG I+ IR ++GA I++
Sbjct: 12 REFSVRVVCPTGNIGGVIGKGGAIINQIRQDSGATIKV 49
>gi|115482708|ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group]
gi|22128716|gb|AAM92828.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|110289325|gb|ABB47821.2| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113639556|dbj|BAF26861.1| Os10g0495000 [Oryza sativa Japonica Group]
gi|215694845|dbj|BAG90036.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 762
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 187/472 (39%), Positives = 286/472 (60%), Gaps = 43/472 (9%)
Query: 6 NSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
N+ KR H +D G KR + D P +T+YR LCP++KIGS++GRGG+IV
Sbjct: 12 NTSRKRPHFNSD---DGKRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGRGGDIV 68
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSASDET-----NAFEDGDKFVSP---AQDALF 117
K LR TK+KIR+ +++PG++ERV+ +++ S +T N DG + + P AQDAL
Sbjct: 69 KALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNISTDGFEDMKPHCFAQDALL 128
Query: 118 KVHDRVIAEE-LRG---DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQI 173
K+HD++ A+E L E S+ V A++LVP +Q+GC++GKGG I+Q +R++TGA I
Sbjct: 129 KIHDKIAADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGI 188
Query: 174 RILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS--- 230
R+L E+LP CAL+SDELVQISG +S+V+KAL +I++RLH +P + L I S
Sbjct: 189 RVLPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLEEIIDASTQR 248
Query: 231 -HSSSGSLVGPTAATPIVGI-----APLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEF 284
H + L P + + PL+ PY + +SA ++EF
Sbjct: 249 KHQAPPQLPHANPMLPHLHVDHSPQIPLLDPY--------RNRPLQYHSA-----EAEEF 295
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-DSSSTEGDDCLITVSSKEFFEDTL 343
S++++C +IG VIGK G + Q+ Q++GA ++V + ++ LI VSS+E +D +
Sbjct: 296 SIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPDDPV 355
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
S TIEA++ L + S E TTRL+VP++++GC+IG+GG +ITEMRR T A I
Sbjct: 356 SPTIEALILLHSKVSTLAENH----HLTTRLVVPSNKVGCIIGEGGKVITEMRRRTGAEI 411
Query: 404 RILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVST 455
R+ K + PK S D+E+VQ++G +A+ AL ++ +RLR R+G+ S
Sbjct: 412 RVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTL-RDGSSSN 462
>gi|125532489|gb|EAY79054.1| hypothetical protein OsI_34164 [Oryza sativa Indica Group]
gi|125575260|gb|EAZ16544.1| hypothetical protein OsJ_32017 [Oryza sativa Japonica Group]
Length = 769
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 187/472 (39%), Positives = 286/472 (60%), Gaps = 43/472 (9%)
Query: 6 NSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
N+ KR H +D G KR + D P +T+YR LCP++KIGS++GRGG+IV
Sbjct: 19 NTSRKRPHFNSD---DGKRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGRGGDIV 75
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSASDET-----NAFEDGDKFVSP---AQDALF 117
K LR TK+KIR+ +++PG++ERV+ +++ S +T N DG + + P AQDAL
Sbjct: 76 KALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNISTDGFEDMKPHCFAQDALL 135
Query: 118 KVHDRVIAEE-LRG---DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQI 173
K+HD++ A+E L E S+ V A++LVP +Q+GC++GKGG I+Q +R++TGA I
Sbjct: 136 KIHDKIAADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGI 195
Query: 174 RILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS--- 230
R+L E+LP CAL+SDELVQISG +S+V+KAL +I++RLH +P + L I S
Sbjct: 196 RVLPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLEEIIDASTQR 255
Query: 231 -HSSSGSLVGPTAATPIVGI-----APLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEF 284
H + L P + + PL+ PY + +SA ++EF
Sbjct: 256 KHQAPPQLPHANPMLPHLHVDHSPQIPLLDPY--------RNRPLQYHSA-----EAEEF 302
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-DSSSTEGDDCLITVSSKEFFEDTL 343
S++++C +IG VIGK G + Q+ Q++GA ++V + ++ LI VSS+E +D +
Sbjct: 303 SIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPDDPV 362
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
S TIEA++ L + S E TTRL+VP++++GC+IG+GG +ITEMRR T A I
Sbjct: 363 SPTIEALILLHSKVSTLAENH----HLTTRLVVPSNKVGCIIGEGGKVITEMRRRTGAEI 418
Query: 404 RILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVST 455
R+ K + PK S D+E+VQ++G +A+ AL ++ +RLR R+G+ S
Sbjct: 419 RVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTL-RDGSSSN 469
>gi|110289326|gb|AAP54423.2| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 677
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 187/472 (39%), Positives = 286/472 (60%), Gaps = 43/472 (9%)
Query: 6 NSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
N+ KR H +D G KR + D P +T+YR LCP++KIGS++GRGG+IV
Sbjct: 12 NTSRKRPHFNSD---DGKRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGRGGDIV 68
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSASDET-----NAFEDGDKFVSP---AQDALF 117
K LR TK+KIR+ +++PG++ERV+ +++ S +T N DG + + P AQDAL
Sbjct: 69 KALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNISTDGFEDMKPHCFAQDALL 128
Query: 118 KVHDRVIAEE-LRG---DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQI 173
K+HD++ A+E L E S+ V A++LVP +Q+GC++GKGG I+Q +R++TGA I
Sbjct: 129 KIHDKIAADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGI 188
Query: 174 RILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS--- 230
R+L E+LP CAL+SDELVQISG +S+V+KAL +I++RLH +P + L I S
Sbjct: 189 RVLPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLEEIIDASTQR 248
Query: 231 -HSSSGSLVGPTAATPIVGI-----APLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEF 284
H + L P + + PL+ PY + +SA ++EF
Sbjct: 249 KHQAPPQLPHANPMLPHLHVDHSPQIPLLDPY--------RNRPLQYHSA-----EAEEF 295
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-DSSSTEGDDCLITVSSKEFFEDTL 343
S++++C +IG VIGK G + Q+ Q++GA ++V + ++ LI VSS+E +D +
Sbjct: 296 SIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPDDPV 355
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
S TIEA++ L + S E TTRL+VP++++GC+IG+GG +ITEMRR T A I
Sbjct: 356 SPTIEALILLHSKVSTLAENH----HLTTRLVVPSNKVGCIIGEGGKVITEMRRRTGAEI 411
Query: 404 RILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVST 455
R+ K + PK S D+E+VQ++G +A+ AL ++ +RLR R+G+ S
Sbjct: 412 RVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTL-RDGSSSN 462
>gi|195655947|gb|ACG47441.1| nucleic acid binding protein [Zea mays]
gi|414870927|tpg|DAA49484.1| TPA: nucleic acid binding protein [Zea mays]
Length = 769
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 184/468 (39%), Positives = 282/468 (60%), Gaps = 53/468 (11%)
Query: 4 QRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGE 63
+R++ KR+HS +D G KR T D P +T+YR LCP++KIGS++GRGG+
Sbjct: 7 RRSNSKKRTHSNSD---DGKRKRLNTRHDDTSMFSEPIETIYRILCPVKKIGSVLGRGGD 63
Query: 64 IVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDK---------FVSP--A 112
IVK LR +TK+KIR+ +++PG++ERV+ +++ +E ++ + F S A
Sbjct: 64 IVKALREETKAKIRVADSIPGADERVIIIFNYQNEPEPTDEAAEEKNSDGLGNFKSHCFA 123
Query: 113 QDALFKVHDRVIAEELR----GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSE 168
QDAL K+HD+++++E+ DE S+ VTA++LV +Q+GC++GKGG I+Q +RS
Sbjct: 124 QDALLKIHDKIVSDEIHDEVANDEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSN 183
Query: 169 TGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAIS 228
TGA IR+L E+LP CAL+SDELVQISG S+V+KAL +I++RLH +P + L I
Sbjct: 184 TGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEEIID 243
Query: 229 NS-----------HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD 277
S H S + TP + PL+ PY S P+
Sbjct: 244 ASTQRKRESPTLQHEYSMLPHLHSDHTPPI---PLLDPY---------------RSGPQY 285
Query: 278 DLS-SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSS 335
++ ++EFS+R++C IG VIGK GA + ++ Q++GA IKV + + LI +SS
Sbjct: 286 PVTETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISS 345
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
E + +S IEA++ L + S E+ +TRL+VP+S++GC+IG+GG +IT+M
Sbjct: 346 NEIPAEPISPAIEALILLHDKVSAPSEKHHS----STRLVVPSSKVGCIIGEGGKVITDM 401
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
RR T A IR+ K + PK S DDE+VQ++G +A+ AL ++ +RLR
Sbjct: 402 RRRTGAEIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRLR 449
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 365 SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQI 424
+G +S T L +P S +G ++G GG + E+R+++ A +R+ A + +V+I
Sbjct: 676 TGFLS-TIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAH-----AGSSESVVEI 729
Query: 425 SGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
G LD AK A + + AN ++ S+ +P++
Sbjct: 730 QGTLDQAKAAQSLLQGFISANSRQQQQPYSSRMPLY 765
>gi|414870928|tpg|DAA49485.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 770
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 184/468 (39%), Positives = 282/468 (60%), Gaps = 53/468 (11%)
Query: 4 QRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGE 63
+R++ KR+HS +D G KR T D P +T+YR LCP++KIGS++GRGG+
Sbjct: 7 RRSNSKKRTHSNSD---DGKRKRLNTRHDDTSMFSEPIETIYRILCPVKKIGSVLGRGGD 63
Query: 64 IVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDK---------FVSP--A 112
IVK LR +TK+KIR+ +++PG++ERV+ +++ +E ++ + F S A
Sbjct: 64 IVKALREETKAKIRVADSIPGADERVIIIFNYQNEPEPTDEAAEEKNSDGLGNFKSHCFA 123
Query: 113 QDALFKVHDRVIAEELR----GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSE 168
QDAL K+HD+++++E+ DE S+ VTA++LV +Q+GC++GKGG I+Q +RS
Sbjct: 124 QDALLKIHDKIVSDEIHDEVANDEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSN 183
Query: 169 TGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAIS 228
TGA IR+L E+LP CAL+SDELVQISG S+V+KAL +I++RLH +P + L I
Sbjct: 184 TGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEEIID 243
Query: 229 NS-----------HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD 277
S H S + TP + PL+ PY S P+
Sbjct: 244 ASTQRKRESPTLQHEYSMLPHLHSDHTPPI---PLLDPY---------------RSGPQY 285
Query: 278 DLS-SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSS 335
++ ++EFS+R++C IG VIGK GA + ++ Q++GA IKV + + LI +SS
Sbjct: 286 PVTETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISS 345
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
E + +S IEA++ L + S E+ +TRL+VP+S++GC+IG+GG +IT+M
Sbjct: 346 NEIPAEPISPAIEALILLHDKVSAPSEKHHS----STRLVVPSSKVGCIIGEGGKVITDM 401
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
RR T A IR+ K + PK S DDE+VQ++G +A+ AL ++ +RLR
Sbjct: 402 RRRTGAEIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRLR 449
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 365 SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQI 424
+G T L +P S +G ++G GG + E+R+++ A +R+ A + +V+I
Sbjct: 676 TGRFLSTIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAH-----AGSSESVVEI 730
Query: 425 SGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
G LD AK A + + AN ++ S+ +P++
Sbjct: 731 QGTLDQAKAAQSLLQGFISANSRQQQQPYSSRMPLY 766
>gi|357146815|ref|XP_003574121.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 777
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 187/477 (39%), Positives = 277/477 (58%), Gaps = 48/477 (10%)
Query: 10 KRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLR 69
KR+H +D G KR + D P +TVYR LCP +KIGS++GRGG IVK LR
Sbjct: 16 KRTHFNSD---DGNRKRLNSRHDDGPMSSQPIETVYRILCPGKKIGSVLGRGGHIVKALR 72
Query: 70 IDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSP------------AQDALF 117
+TK+KIR+ +++PG+EERV+ ++ D++ ++ + +S AQDAL
Sbjct: 73 EETKAKIRVADSIPGAEERVIIIFDYQDQSEQTDEAAQNISNNDGSENMKLQCFAQDALL 132
Query: 118 KVHDRVIAEELRGD----EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQI 173
K+HD++ E D E S+ VTA++LVP +Q+GC++GKGG I+Q +R++TGA I
Sbjct: 133 KIHDKISTHEDPHDGAIHEKSETAADVTARILVPGNQVGCLLGKGGSIIQQLRNDTGAGI 192
Query: 174 RILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHS- 232
RIL + LP CAL+SDELVQISG S+V+KAL +I++RLH +P + L I S
Sbjct: 193 RILPSQDLPQCALQSDELVQISGAPSLVRKALYEISTRLHQHPRKENPPLEEIIDASTQR 252
Query: 233 --------SSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR-SLYSAPRDDLSSKE 283
+L+ P + PL+ PY SR S Y P ++E
Sbjct: 253 KRESPPPLPHENLMLPYQHVDRLPPMPLLDPY----------RSRPSQYPVP----EAEE 298
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFFEDT 342
FS+R++C IG VIGK GA + Q+ Q++GA I V + + LI +SSKE D
Sbjct: 299 FSVRILCASELIGPVIGKSGANVRQVEQQTGARILVQELDKDASGERLIVLSSKEIPGDP 358
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKAN 402
+S IEA++ L + S E+ TRL+VP+S++GC++G+GG +ITEMRR A
Sbjct: 359 VSPAIEALILLHSKVSASSEKR----HLITRLVVPSSKVGCILGEGGKVITEMRRRIGAE 414
Query: 403 IRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPV 459
IR+ K + PK S D+E+VQ++G D+A+DAL ++ +RLR G+ + +P+
Sbjct: 415 IRVYSKADKPKYLSFDEELVQVAGPPDIARDALTEIASRLRTRTLRDGGSGNNPLPL 471
>gi|147790774|emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]
Length = 668
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 209/492 (42%), Positives = 302/492 (61%), Gaps = 58/492 (11%)
Query: 4 QRNSYGKRSHSQTDYADHGPNKR-RYTGDDRDQFIIGPE--DTVYRYLCPIRKIGSIIGR 60
+R S+ KR + Q + G NKR R+ +Q + DTVYR LCP +KIG +IG+
Sbjct: 33 RRGSFKKRPNFQ--FKRKGSNKRGRWNNSSHEQSFGNSQVADTVYRILCPSKKIGGVIGK 90
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSAS----DETNAFEDGDKFVS------ 110
GG IVK LR +T++KI + ++VPGS+ERV+ +YSA E N+ ED ++
Sbjct: 91 GGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPKEHNSNEDPEREEEQDHMEP 150
Query: 111 --PAQDALFKVHDRVIAEELRGD---EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
PAQDAL KVH+R+I E+L G ED + VTA+LLVP++ +GC++GK G ++Q +
Sbjct: 151 HCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVVTARLLVPNNMVGCLLGKRGDVIQRL 210
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
RSETGA IR+L EHLP+CA+ SDELVQISG+ +V KKAL ++++ LH NP + + +
Sbjct: 211 RSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQNPRKDKPPSSF 270
Query: 226 AIS---NSHSSSGSLVG--PTAATPI----------VGIAPLMGPY--------GGYKGD 262
+S G+ +G P P+ V P MG Y GG+ G
Sbjct: 271 PMSFGGQGFHPPGASMGNMPPPGNPMWSNRNSNSQGVPPMPWMGGYRSQPSVVPGGFDGV 330
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
AG +S EFS++++CP IGGVIGKGG + Q++QE+GA+I V+ +
Sbjct: 331 HAGHGGE----------ASGEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDA 380
Query: 323 STEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIG 382
E ++ +I VSS E + S TIEA+++LQ + SE ++ TTRLLVP+S++G
Sbjct: 381 LAESEERVIRVSSFEALWNPRSQTIEAILQLQNKTSEYSDKG----GMTTRLLVPSSKVG 436
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
C++G+GG +I EMRR T+A+IR+ KE+ PK AS+D+E+VQISG+ +AKDAL ++ +RL
Sbjct: 437 CILGQGGHVINEMRRRTQADIRVYSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRL 496
Query: 443 RAN-LFDREGAV 453
R L D G V
Sbjct: 497 RVRCLRDANGGV 508
>gi|413933964|gb|AFW68515.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 768
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 184/474 (38%), Positives = 281/474 (59%), Gaps = 35/474 (7%)
Query: 4 QRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGE 63
+R++ KR HS +D G KR + D P +T+YR LCP +KIGS++GRGG+
Sbjct: 7 RRSNSKKRRHSNSD---DGKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGD 63
Query: 64 IVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET--------NAFEDGDKFVSP---A 112
IVK LR +TK+KIR+ +++PG++ERV+ +++ ++ DG + P A
Sbjct: 64 IVKALREETKAKIRVADSIPGADERVIIIFNYQNQPELTDEAAEKQISDGLGNMKPHCFA 123
Query: 113 QDALFKVHDRVIAEELRG----DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSE 168
QDAL K+HD+++A+E+ DE SD VTA++LV +Q+GC++GKGG I+Q +RS+
Sbjct: 124 QDALLKIHDKIVADEIYDEVAHDESSD---DVTARILVQGNQVGCLLGKGGSIIQQLRSD 180
Query: 169 TGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAIS 228
TGA IR+L E+LP CAL+SDELVQISG S+V+KAL +I++RLH +P + L I
Sbjct: 181 TGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEQIID 240
Query: 229 NSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS-SKEFSLR 287
S +P + M P+ S P+ +S ++EFS+R
Sbjct: 241 ASTQRKHE-------SPTLQHENPMLPHLHSHHPPPIPLLDPYRSGPQYPVSETEEFSIR 293
Query: 288 LVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFFEDTLSAT 346
++C IG VIGK GA + ++ Q++GA IKV + + LI VSS E + +S T
Sbjct: 294 ILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTEPISPT 353
Query: 347 IEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
IEA++ L + S E+ +TRL+VP++++GC++G+GG +ITEMRR T A IR+
Sbjct: 354 IEALILLHDKVSASSEKHHS----STRLVVPSNKVGCILGEGGQVITEMRRRTGAEIRVY 409
Query: 407 PKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
K + PK S DE+VQ++G +A+ AL ++ +RLR R+ + + P F
Sbjct: 410 SKADKPKYLSFGDELVQVAGPPAIARGALTEIASRLRTRTL-RDTSTANNPPPF 462
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 114/224 (50%), Gaps = 25/224 (11%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSASDET 99
E+ R LC IGS+IG+ G V+++ T ++I++ E S ER++ V S T
Sbjct: 288 EEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPT 347
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+SP +AL +HD+V A S H + +L+VPS+++GC++G+GG
Sbjct: 348 EP-------ISPTIEALILLHDKVSA--------SSEKHHSSTRLVVPSNKVGCILGEGG 392
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
Q++ +R TGA+IR+ P DELVQ++G ++ + AL +IASRL R+
Sbjct: 393 QVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQVAGPPAIARGALTEIASRL-----RT 447
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDT 263
+ L ++ +N+ PT P + YGG DT
Sbjct: 448 RTLRDTSTANNPPPFAPSDDPTVDMPSRKLT----LYGGPTNDT 487
>gi|414870926|tpg|DAA49483.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 541
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 180/453 (39%), Positives = 273/453 (60%), Gaps = 53/453 (11%)
Query: 4 QRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGE 63
+R++ KR+HS +D G KR T D P +T+YR LCP++KIGS++GRGG+
Sbjct: 7 RRSNSKKRTHSNSD---DGKRKRLNTRHDDTSMFSEPIETIYRILCPVKKIGSVLGRGGD 63
Query: 64 IVKQLRIDTKSKIRIGETVPGSEERVVTVYS----------ASDETNAFEDGD-KFVSPA 112
IVK LR +TK+KIR+ +++PG++ERV+ +++ A++E N+ G+ K A
Sbjct: 64 IVKALREETKAKIRVADSIPGADERVIIIFNYQNEPEPTDEAAEEKNSDGLGNFKSHCFA 123
Query: 113 QDALFKVHDRVIAEELR----GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSE 168
QDAL K+HD+++++E+ DE S+ VTA++LV +Q+GC++GKGG I+Q +RS
Sbjct: 124 QDALLKIHDKIVSDEIHDEVANDEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSN 183
Query: 169 TGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAIS 228
TGA IR+L E+LP CAL+SDELVQISG S+V+KAL +I++RLH +P + L I
Sbjct: 184 TGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEEIID 243
Query: 229 NS-----------HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD 277
S H S + TP + PL+ PY S P+
Sbjct: 244 ASTQRKRESPTLQHEYSMLPHLHSDHTPPI---PLLDPY---------------RSGPQY 285
Query: 278 DLS-SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSS 335
++ ++EFS+R++C IG VIGK GA + ++ Q++GA IKV + + LI +SS
Sbjct: 286 PVTETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISS 345
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
E + +S IEA++ L + S E+ +TRL+VP+S++GC+IG+GG +IT+M
Sbjct: 346 NEIPAEPISPAIEALILLHDKVSAPSEKHHS----STRLVVPSSKVGCIIGEGGKVITDM 401
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDL 428
RR T A IR+ K + PK S DDE+VQ +G +
Sbjct: 402 RRRTGAEIRVYSKADKPKYLSFDDELVQAAGQI 434
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 111/202 (54%), Gaps = 32/202 (15%)
Query: 270 SLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDC 329
S++S P + + R++CPV IG V+G+GG I+ +R+E+ A I+V S D+
Sbjct: 35 SMFSEPIETI------YRILCPVKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADER 88
Query: 330 LITV------------SSKEFFEDTLSA------TIEAVVRLQPR-CSEKI-------ER 363
+I + +++E D L +A++++ + S++I E+
Sbjct: 89 VIIIFNYQNEPEPTDEAAEEKNSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEK 148
Query: 364 DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQ 423
T R+LV +++GCL+GKGGSII ++R T A IR+LP ENLP+ A + DE+VQ
Sbjct: 149 SESADDVTARILVQGNQVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQ 208
Query: 424 ISGDLDLAKDALIQVMTRLRAN 445
ISG L + AL ++ TRL +
Sbjct: 209 ISGAPSLVRKALYEISTRLHQH 230
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 36/197 (18%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG-----D 327
SAP + S S RLV P + +G +IG+GG +I +R+ +GA I+V S + + D
Sbjct: 368 SAPSEKHHS---STRLVVPSSKVGCIIGEGGKVITDMRRRTGAEIRVYSKADKPKYLSFD 424
Query: 328 DCLIT----VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGC 383
D L+ + +E + + SAT G T L +P S +G
Sbjct: 425 DELVQAAGQIHGREDYREPTSAT-------------------GRFLSTIELRIPNSSLGS 465
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
++G GG + E+R+++ A +R+ A + +V+I G LD AK A + +
Sbjct: 466 IVGAGGVNLAEIRQVSGARLRLHEAH-----AGSSESVVEIQGTLDQAKAAQSLLQGFIS 520
Query: 444 ANLFDREGAVSTFVPVF 460
AN ++ S+ +P++
Sbjct: 521 ANSRQQQQPYSSRMPLY 537
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 26/180 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + P K+G IIG GG+++ +R T ++IR VYS +D+
Sbjct: 379 RLVVPSSKVGCIIGEGGKVITDMRRRTGAEIR--------------VYSKADKPKYLSFD 424
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
D+ V A ++H R E+ R + G T +L +P+ +G ++G GG + I
Sbjct: 425 DELVQ----AAGQIHGR---EDYREPTSATGRFLSTIELRIPNSSLGSIVGAGGVNLAEI 477
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
R +GA++R L + H S S+ +V+I G K A + + N + Q +S
Sbjct: 478 RQVSGARLR-LHEAHAGS----SESVVEIQGTLDQAKAAQSLLQGFISANSRQQQQPYSS 532
>gi|359488265|ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
gi|296087281|emb|CBI33655.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 208/492 (42%), Positives = 301/492 (61%), Gaps = 58/492 (11%)
Query: 4 QRNSYGKRSHSQTDYADHGPNKR-RYTGDDRDQFIIGPE--DTVYRYLCPIRKIGSIIGR 60
+R S+ KR + Q + G NKR R+ +Q + DTVYR LCP +KIG +IG+
Sbjct: 5 RRGSFKKRPNFQ--FKRKGSNKRGRWNNSSHEQSFGNSQVADTVYRILCPSKKIGGVIGK 62
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSA---------SDETNAFEDGDKFVSP 111
GG IVK LR +T++KI + ++VPGS+ERV+ +YSA S+E E+ + P
Sbjct: 63 GGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPKEHDSNEDPEMEEEQDHMEP 122
Query: 112 ---AQDALFKVHDRVIAEELRGD---EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
AQDAL KVH+R+I E+L G ED + VTA+LLVP++ +GC++GK G ++Q +
Sbjct: 123 HCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVVTARLLVPNNMVGCLLGKRGDVIQRL 182
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
RSETGA IR+L EHLP+CA+ SDELVQISG+ +V KKAL ++++ LH NP + + +
Sbjct: 183 RSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQNPRKDKPPSSF 242
Query: 226 AIS---NSHSSSGSLVG--PTAATPI----------VGIAPLMGPY--------GGYKGD 262
+S G+ +G P P+ V P MG Y GG+ G
Sbjct: 243 PMSFGGQGFHPPGASMGNMPPPGNPMWSNRNSNSQGVPPMPWMGGYRSQPSVVPGGFDGV 302
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
AG +S EFS++++CP IGGVIGKGG + Q++QE+GA+I V+ +
Sbjct: 303 HAGHGGE----------ASGEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDA 352
Query: 323 STEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIG 382
E ++ +I VSS E + S TIEA+++LQ + SE ++ TTRLLVP+S++G
Sbjct: 353 LAESEERVIRVSSFEALWNPRSQTIEAILQLQNKTSEYSDKG----GMTTRLLVPSSKVG 408
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
C++G+GG +I EMRR T+A+IR+ KE+ PK AS+D+E+VQISG+ +AKDAL ++ +RL
Sbjct: 409 CILGQGGHVINEMRRRTQADIRVYSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRL 468
Query: 443 RAN-LFDREGAV 453
R L D G V
Sbjct: 469 RVRCLRDANGGV 480
>gi|147789387|emb|CAN73316.1| hypothetical protein VITISV_043333 [Vitis vinifera]
Length = 511
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 149/235 (63%), Positives = 187/235 (79%), Gaps = 13/235 (5%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
+DT+YRYLCP +KIGSII RG +IVKQ R+DTK KI IG+TV G EE VVT+Y+ S E+N
Sbjct: 290 KDTIYRYLCPGKKIGSIIRRGWKIVKQQRVDTKPKISIGDTVSGCEEHVVTIYNFSIESN 349
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
F++ + FVSP Q+ LF+VHDRVI++E+ DE+ + + QIGCVIGKGGQ
Sbjct: 350 VFDNSNTFVSPTQNVLFRVHDRVISDEVH-DENFE-----------EASQIGCVIGKGGQ 397
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
I+Q+IRSE+GAQIRILKD+HLPS L SD+L+QISGE S+V KAL QIASRLHDNPS+SQ
Sbjct: 398 IIQSIRSESGAQIRILKDDHLPSRVLSSDKLIQISGEPSLVMKALYQIASRLHDNPSQSQ 457
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
HLL + +SS GSL+GPT++ PI+G+APL+G YGGY+GD +GDWSRSLYSAP
Sbjct: 458 HLLVXTMPTGYSSGGSLMGPTSSAPIMGLAPLVGTYGGYRGD-SGDWSRSLYSAP 511
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 19/181 (10%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
S+P L K+ R +CP IG +I +G I+ Q R ++ I + + + ++ ++T
Sbjct: 283 SSPTSRL--KDTIYRYLCPGKKIGSIIRRGWKIVKQQRVDTKPKISIGDTVSGCEEHVVT 340
Query: 333 VSS----KEFFEDT---LSATIEAVVRLQPRC-SEKIERDSGLISFTTRLLVPTSRIGCL 384
+ + F+++ +S T + R+ R S+++ ++ S+IGC+
Sbjct: 341 IYNFSIESNVFDNSNTFVSPTQNVLFRVHDRVISDEVHDEN---------FEEASQIGCV 391
Query: 385 IGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRA 444
IGKGG II +R + A IRIL ++LP D+++QISG+ L AL Q+ +RL
Sbjct: 392 IGKGGQIIQSIRSESGAQIRILKDDHLPSRVLSSDKLIQISGEPSLVMKALYQIASRLHD 451
Query: 445 N 445
N
Sbjct: 452 N 452
>gi|413933963|gb|AFW68514.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 464
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 181/461 (39%), Positives = 275/461 (59%), Gaps = 34/461 (7%)
Query: 4 QRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGE 63
+R++ KR HS +D G KR + D P +T+YR LCP +KIGS++GRGG+
Sbjct: 7 RRSNSKKRRHSNSD---DGKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGD 63
Query: 64 IVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE--------TNAFEDGDKFVSP---A 112
IVK LR +TK+KIR+ +++PG++ERV+ +++ ++ DG + P A
Sbjct: 64 IVKALREETKAKIRVADSIPGADERVIIIFNYQNQPELTDEAAEKQISDGLGNMKPHCFA 123
Query: 113 QDALFKVHDRVIAEELRG----DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSE 168
QDAL K+HD+++A+E+ DE SD VTA++LV +Q+GC++GKGG I+Q +RS+
Sbjct: 124 QDALLKIHDKIVADEIYDEVAHDESSD---DVTARILVQGNQVGCLLGKGGSIIQQLRSD 180
Query: 169 TGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAIS 228
TGA IR+L E+LP CAL+SDELVQISG S+V+KAL +I++RLH +P + L I
Sbjct: 181 TGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEQIID 240
Query: 229 NSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS-SKEFSLR 287
S +P + M P+ S P+ +S ++EFS+R
Sbjct: 241 ASTQRKHE-------SPTLQHENPMLPHLHSHHPPPIPLLDPYRSGPQYPVSETEEFSIR 293
Query: 288 LVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFFEDTLSAT 346
++C IG VIGK GA + ++ Q++GA IKV + + LI VSS E + +S T
Sbjct: 294 ILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTEPISPT 353
Query: 347 IEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
IEA++ L + S E+ +TRL+VP++++GC++G+GG +ITEMRR T A IR+
Sbjct: 354 IEALILLHDKVSASSEKHHS----STRLVVPSNKVGCILGEGGQVITEMRRRTGAEIRVY 409
Query: 407 PKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
K + PK S DE+VQ++G +A+ AL ++ +RLR
Sbjct: 410 SKADKPKYLSFGDELVQVAGPPAIARGALTEIASRLRTRTL 450
>gi|242039239|ref|XP_002467014.1| hypothetical protein SORBIDRAFT_01g018300 [Sorghum bicolor]
gi|241920868|gb|EER94012.1| hypothetical protein SORBIDRAFT_01g018300 [Sorghum bicolor]
Length = 542
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 177/457 (38%), Positives = 270/457 (59%), Gaps = 50/457 (10%)
Query: 8 YGK--RSHSQT-DYADHGPNKRRYTGDDRDQFIIG--PEDTVYRYLCPIRKIGSIIGRGG 62
YGK RS+S+ Y++ KR+ D + P +T+YR LCP++KIGS++GRGG
Sbjct: 3 YGKSRRSNSKKRTYSNSEDRKRKRLNSRHDDTSMSSEPVETIYRILCPVKKIGSVLGRGG 62
Query: 63 EIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE--------TNAFEDGDKFVSP--- 111
++VK LR +TK+KIR+ + +PG++ERV+ +++ ++ F DG + P
Sbjct: 63 DVVKALREETKAKIRVADPIPGADERVIIIFNYQNQPELTDEAAETKFSDGLGNMKPHCF 122
Query: 112 AQDALFKVHDRVIAEELR----GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRS 167
AQDAL K+HD+++A+E+ +E S+ VTA++LV +Q+GC++GKGG I+Q +RS
Sbjct: 123 AQDALLKIHDKIVADEIHDGVAHEEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRS 182
Query: 168 ETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAI 227
+TGA IR+L E LP CAL+SDELVQISG S+V+KAL +I++RLH +P + L I
Sbjct: 183 DTGAGIRVLPSEDLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEEII 242
Query: 228 SNS-HSSSGSLVGPTAATPIV--------GIAPLMGPY-GGYKGDTAGDWSRSLYSAPRD 277
+ S S + P++ PL+ PY G +
Sbjct: 243 NASTQRKRESPILLQHENPMLPHLHSDHPPPIPLLDPYRSGLQYHVT------------- 289
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSK 336
++EFS+R++C IG VIGK GA + ++ Q++GA IKV + + LI VSSK
Sbjct: 290 --ETEEFSIRILCASELIGSVIGKSGANVKRVEQQTGARIKVQEIDKDASGESLIIVSSK 347
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
E + +S IEA++ L + S E+ +TRL+VP+S++GC++G+GG +ITEMR
Sbjct: 348 EVPSEPISPAIEALILLHDKVSAPSEKRHS----STRLVVPSSKVGCILGEGGKVITEMR 403
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
R T A IR+ K + PK S DDE+VQ +G + +D
Sbjct: 404 RRTGAEIRVYSKADKPKYLSFDDELVQTAGQIHGRED 440
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 36/213 (16%)
Query: 266 DWSRSLYSAPRDDLSSK----EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D R ++ DD S E R++CPV IG V+G+GG ++ +R+E+ A I+V
Sbjct: 21 DRKRKRLNSRHDDTSMSSEPVETIYRILCPVKKIGSVLGRGGDVVKALREETKAKIRVAD 80
Query: 322 SSTEGDDCLITVSSKEFFEDTLSATIEA--------VVRLQPRC---------SEKI--- 361
D+ +I + + +++ T EA + ++P C +KI
Sbjct: 81 PIPGADERVIIIFN---YQNQPELTDEAAETKFSDGLGNMKPHCFAQDALLKIHDKIVAD 137
Query: 362 ---------ERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLP 412
E+ T R+LV +++GCL+GKGGSII ++R T A IR+LP E+LP
Sbjct: 138 EIHDGVAHEEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLPSEDLP 197
Query: 413 KIASEDDEMVQISGDLDLAKDALIQVMTRLRAN 445
+ A + DE+VQISG L + AL ++ TRL +
Sbjct: 198 QCALKSDELVQISGAPSLVRKALYEISTRLHQH 230
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 37/171 (21%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG-----D 327
SAP + S S RLV P + +G ++G+GG +I ++R+ +GA I+V S + + D
Sbjct: 369 SAPSEKRHS---STRLVVPSSKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFD 425
Query: 328 DCLIT----VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGC 383
D L+ + +E + SAT G +S T L +P S +
Sbjct: 426 DELVQTAGQIHGREDYRGLTSAT-------------------GFLS-TIELRIPNSSLES 465
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
++G GG + E+R+++ A +R+ A + +V+I G L+ AK A
Sbjct: 466 IVGVGGVNLAEIRQISGARLRLHEAH-----AGSSESVVEIQGTLEEAKAA 511
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 27/159 (16%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + P K+G I+G GG+++ ++R T ++IR VYS +D+
Sbjct: 380 RLVVPSSKVGCILGEGGKVITEMRRRTGAEIR--------------VYSKADKPKYLSFD 425
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
D+ V A ++H R E+ RG S G T +L +P+ + ++G GG + I
Sbjct: 426 DELVQTA----GQIHGR---EDYRG-LTSATGFLSTIELRIPNSSLESIVGVGGVNLAEI 477
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
R +GA++R L + H S S+ +V+I G K A
Sbjct: 478 RQISGARLR-LHEAHAGS----SESVVEIQGTLEEAKAA 511
>gi|296087074|emb|CBI33448.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 158/276 (57%), Positives = 190/276 (68%), Gaps = 29/276 (10%)
Query: 63 EIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDR 122
EI+KQLR+DTK KIRI ETV EE VVT+Y+ SDETNAF+D FVSP QDALF+VHD+
Sbjct: 8 EIIKQLRVDTKFKIRIDETVSRCEELVVTIYNFSDETNAFDDSYTFVSPTQDALFRVHDK 67
Query: 123 VIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLP 182
V++E++ ED + QVT +LLV SDQIGCVIGKGGQI+QNI SE+GAQI ILK++HL
Sbjct: 68 VVSEKVHS-EDFEEASQVTVQLLVTSDQIGCVIGKGGQIIQNIYSESGAQIYILKNDHLL 126
Query: 183 SCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTA 242
SCAL DELVQISGE + L ++ +LH QHLLAS + +SS GSL+G
Sbjct: 127 SCALSFDELVQISGE----RPLLGRLFIKLHLFFMIIQHLLASIVPIGYSSGGSLIGD-- 180
Query: 243 ATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKG 302
+GDWSRSLYS PRD+ SSKEFSLRLVCP+ N G+ GKG
Sbjct: 181 ---------------------SGDWSRSLYSVPRDEASSKEFSLRLVCPIGNTSGMFGKG 219
Query: 303 GAIINQIRQESGAAIKVDSSST-EGDDCLITVSSKE 337
IINQIR E A IKVDS+S E DCL+T+S K+
Sbjct: 220 SVIINQIRWEFRAIIKVDSTSVAEAYDCLVTISKKK 255
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 88/168 (52%), Gaps = 20/168 (11%)
Query: 305 IINQIRQESGAAIKVDSSSTEGDDCLITVSS----KEFFEDT---LSATIEAVVRLQPRC 357
II Q+R ++ I++D + + ++ ++T+ + F+D+ +S T +A+ R+ +
Sbjct: 9 IIKQLRVDTKFKIRIDETVSRCEELVVTIYNFSDETNAFDDSYTFVSPTQDALFRVHDKV 68
Query: 358 ------SEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENL 411
SE E S + T +LLV + +IGC+IGKGG II + + A I IL ++L
Sbjct: 69 VSEKVHSEDFEEASQV---TVQLLVTSDQIGCVIGKGGQIIQNIYSESGAQIYILKNDHL 125
Query: 412 PKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPV 459
A DE+VQISG+ + L ++ +L + +++ VP+
Sbjct: 126 LSCALSFDELVQISGE----RPLLGRLFIKLHLFFMIIQHLLASIVPI 169
>gi|224127654|ref|XP_002329331.1| predicted protein [Populus trichocarpa]
gi|222870785|gb|EEF07916.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 190/434 (43%), Positives = 282/434 (64%), Gaps = 40/434 (9%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
DTVYR LCP RKIG +IG+GG IVK LR +T+SKI + ++V GS+ERV+ +YS+SD+
Sbjct: 43 DTVYRILCPSRKIGGVIGKGGNIVKALREETQSKITVADSVQGSDERVIIIYSSSDKPPR 102
Query: 102 FEDGDKFVSP-------------AQDALFKVHDRVIAEELRG----DEDSDGGHQVTAKL 144
DGD+ + AQDAL KVHDR++ E+L G D+D+D + VTA+L
Sbjct: 103 KMDGDEGLPAGNGQQEAFEPHCAAQDALLKVHDRIVEEDLFGGMASDDDNDN-NVVTARL 161
Query: 145 LVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
LVP++ +GCV+GK G ++Q +RSETGA IR+L +HLPSCA+ +DELVQISG+ +V K+A
Sbjct: 162 LVPNNMVGCVLGKRGDVIQRLRSETGANIRVLPADHLPSCAMDTDELVQISGKPAVAKRA 221
Query: 205 LCQIASRLHDNP-------------SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
L +I+ LH NP R+ H + +++N + +TP P
Sbjct: 222 LYEISILLHQNPRKDKLPSVPMPYGGRTFHPPSDSMANMLPPGNPMWPHRNSTPHS--MP 279
Query: 252 LMGPYGGYKGDTA-GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
MG YG + + G ++ R+ S EFS++++C IGGVIGKGG+ + ++
Sbjct: 280 WMGEYGNHPSEFGPGGFNGVPPGHGRE--PSAEFSMKILCSTGKIGGVIGKGGSNVKIVQ 337
Query: 311 QESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISF 370
QE+GA+I V+ +S E ++ I VS+ E + S TI+A+++LQ + S+ E+ G+I
Sbjct: 338 QETGASIHVEDASAESEERAIRVSAFEGLWNPRSQTIDAILQLQDKTSDFSEK--GMI-- 393
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
TRLLVP+S++GC++G+GG +I EMRR +A+IR+ PK + PK AS+D+E+VQISG+ +
Sbjct: 394 ITRLLVPSSKVGCILGQGGQVINEMRRRLQADIRVYPKNDKPKCASDDEELVQISGNYGV 453
Query: 431 AKDALIQVMTRLRA 444
AKDAL ++ +RLRA
Sbjct: 454 AKDALAEIASRLRA 467
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 99/187 (52%), Gaps = 29/187 (15%)
Query: 287 RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS----------- 335
R++CP IGGVIGKGG I+ +R+E+ + I V S D+ +I + S
Sbjct: 47 RILCPSRKIGGVIGKGGNIVKALREETQSKITVADSVQGSDERVIIIYSSSDKPPRKMDG 106
Query: 336 ----------KEFFEDTLSATIEAVVRLQPRCSEK-------IERDSGLISFTTRLLVPT 378
+E FE +A +A++++ R E+ + D+ T RLLVP
Sbjct: 107 DEGLPAGNGQQEAFEPHCAAQ-DALLKVHDRIVEEDLFGGMASDDDNDNNVVTARLLVPN 165
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
+ +GC++GK G +I +R T ANIR+LP ++LP A + DE+VQISG +AK AL ++
Sbjct: 166 NMVGCVLGKRGDVIQRLRSETGANIRVLPADHLPSCAMDTDELVQISGKPAVAKRALYEI 225
Query: 439 MTRLRAN 445
L N
Sbjct: 226 SILLHQN 232
>gi|413933965|gb|AFW68516.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 537
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 176/447 (39%), Positives = 266/447 (59%), Gaps = 34/447 (7%)
Query: 4 QRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGE 63
+R++ KR HS +D G KR + D P +T+YR LCP +KIGS++GRGG+
Sbjct: 7 RRSNSKKRRHSNSD---DGKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGD 63
Query: 64 IVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE--------TNAFEDGDKFVSP---A 112
IVK LR +TK+KIR+ +++PG++ERV+ +++ ++ DG + P A
Sbjct: 64 IVKALREETKAKIRVADSIPGADERVIIIFNYQNQPELTDEAAEKQISDGLGNMKPHCFA 123
Query: 113 QDALFKVHDRVIAEELR----GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSE 168
QDAL K+HD+++A+E+ DE SD VTA++LV +Q+GC++GKGG I+Q +RS+
Sbjct: 124 QDALLKIHDKIVADEIYDEVAHDESSD---DVTARILVQGNQVGCLLGKGGSIIQQLRSD 180
Query: 169 TGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAIS 228
TGA IR+L E+LP CAL+SDELVQISG S+V+KAL +I++RLH +P + L I
Sbjct: 181 TGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEQIID 240
Query: 229 NSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS-SKEFSLR 287
S +P + M P+ S P+ +S ++EFS+R
Sbjct: 241 ASTQRKHE-------SPTLQHENPMLPHLHSHHPPPIPLLDPYRSGPQYPVSETEEFSIR 293
Query: 288 LVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFFEDTLSAT 346
++C IG VIGK GA + ++ Q++GA IKV + + LI VSS E + +S T
Sbjct: 294 ILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTEPISPT 353
Query: 347 IEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
IEA++ L + S E+ +TRL+VP++++GC++G+GG +ITEMRR T A IR+
Sbjct: 354 IEALILLHDKVSASSEKHHS----STRLVVPSNKVGCILGEGGQVITEMRRRTGAEIRVY 409
Query: 407 PKENLPKIASEDDEMVQISGDLDLAKD 433
K + PK S DE+VQ +G + +D
Sbjct: 410 SKADKPKYLSFGDELVQAAGQIHGLED 436
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 27/207 (13%)
Query: 266 DWSRSLYSAPRDDLSSK----EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D R S+ DD S E R++CP IG V+G+GG I+ +R+E+ A I+V
Sbjct: 21 DGKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVAD 80
Query: 322 SSTEGDDCLITV----SSKEFFEDTLSATI-EAVVRLQPRC------------------S 358
S D+ +I + + E ++ I + + ++P C
Sbjct: 81 SIPGADERVIIIFNYQNQPELTDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIY 140
Query: 359 EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASED 418
+++ D T R+LV +++GCL+GKGGSII ++R T A IR+L ENLP+ A +
Sbjct: 141 DEVAHDESSDDVTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQS 200
Query: 419 DEMVQISGDLDLAKDALIQVMTRLRAN 445
DE+VQISG L + AL ++ TRL +
Sbjct: 201 DELVQISGAPSLVRKALYEISTRLHQH 227
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 27/156 (17%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE------GDDCLITVSSKEF 338
S RLV P +G ++G+GG +I ++R+ +GA I+V S + + GD+ +
Sbjct: 374 STRLVVPSNKVGCILGEGGQVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQAAGQIHG 433
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
ED R P S G S T L +P S + ++G GG + E+R++
Sbjct: 434 LED---------YRGLPSAS-------GRFSSTIELRIPNSSLESIVGVGGVNLAEIRQI 477
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
+ A +R+ A + +V+I G LD AK A
Sbjct: 478 SGARLRLHEAH-----AGSSESVVEIQGTLDQAKAA 508
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 26/159 (16%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + P K+G I+G GG+++ ++R T ++IR VYS +D+ G
Sbjct: 376 RLVVPSNKVGCILGEGGQVITEMRRRTGAEIR--------------VYSKADKPKYLSFG 421
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
D+ V A ++H E+ RG + G T +L +P+ + ++G GG + I
Sbjct: 422 DELVQAA----GQIHG---LEDYRGLPSASGRFSSTIELRIPNSSLESIVGVGGVNLAEI 474
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
R +GA++R L + H S S+ +V+I G K A
Sbjct: 475 RQISGARLR-LHEAHAGS----SESVVEIQGTLDQAKAA 508
>gi|413933966|gb|AFW68517.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 428
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 174/439 (39%), Positives = 263/439 (59%), Gaps = 34/439 (7%)
Query: 4 QRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGE 63
+R++ KR HS +D G KR + D P +T+YR LCP +KIGS++GRGG+
Sbjct: 7 RRSNSKKRRHSNSD---DGKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGD 63
Query: 64 IVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE--------TNAFEDGDKFVSP---A 112
IVK LR +TK+KIR+ +++PG++ERV+ +++ ++ DG + P A
Sbjct: 64 IVKALREETKAKIRVADSIPGADERVIIIFNYQNQPELTDEAAEKQISDGLGNMKPHCFA 123
Query: 113 QDALFKVHDRVIAEELRG----DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSE 168
QDAL K+HD+++A+E+ DE SD VTA++LV +Q+GC++GKGG I+Q +RS+
Sbjct: 124 QDALLKIHDKIVADEIYDEVAHDESSD---DVTARILVQGNQVGCLLGKGGSIIQQLRSD 180
Query: 169 TGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAIS 228
TGA IR+L E+LP CAL+SDELVQISG S+V+KAL +I++RLH +P + L I
Sbjct: 181 TGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEQIID 240
Query: 229 NSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS-SKEFSLR 287
S +P + M P+ S P+ +S ++EFS+R
Sbjct: 241 ASTQRKHE-------SPTLQHENPMLPHLHSHHPPPIPLLDPYRSGPQYPVSETEEFSIR 293
Query: 288 LVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFFEDTLSAT 346
++C IG VIGK GA + ++ Q++GA IKV + + LI VSS E + +S T
Sbjct: 294 ILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTEPISPT 353
Query: 347 IEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
IEA++ L + S E+ +TRL+VP++++GC++G+GG +ITEMRR T A IR+
Sbjct: 354 IEALILLHDKVSASSEKHHS----STRLVVPSNKVGCILGEGGQVITEMRRRTGAEIRVY 409
Query: 407 PKENLPKIASEDDEMVQIS 425
K + PK S DE+VQ++
Sbjct: 410 SKADKPKYLSFGDELVQVT 428
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 27/207 (13%)
Query: 266 DWSRSLYSAPRDDLSSK----EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D R S+ DD S E R++CP IG V+G+GG I+ +R+E+ A I+V
Sbjct: 21 DGKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVAD 80
Query: 322 SSTEGDDCLITV----SSKEFFEDTLSATI-EAVVRLQPRC------------------S 358
S D+ +I + + E ++ I + + ++P C
Sbjct: 81 SIPGADERVIIIFNYQNQPELTDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIY 140
Query: 359 EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASED 418
+++ D T R+LV +++GCL+GKGGSII ++R T A IR+L ENLP+ A +
Sbjct: 141 DEVAHDESSDDVTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQS 200
Query: 419 DEMVQISGDLDLAKDALIQVMTRLRAN 445
DE+VQISG L + AL ++ TRL +
Sbjct: 201 DELVQISGAPSLVRKALYEISTRLHQH 227
>gi|255551350|ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223544094|gb|EEF45619.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 537
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 188/438 (42%), Positives = 276/438 (63%), Gaps = 45/438 (10%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD-- 97
P DTVYR LCP RKIG +IG+GG I+K LR +T++KI + + VPGS+ERV+ +YS+ +
Sbjct: 42 PVDTVYRILCPSRKIGGVIGKGGGIIKGLREETQAKITVADPVPGSDERVIIIYSSPEKI 101
Query: 98 -------ETNAFEDGDKFVSP---AQDALFKVHDRVIAEELRG----DEDSDGGHQVTAK 143
E E+ + P AQDAL KVHDR++ E+L G D+D++ G VTA+
Sbjct: 102 SRNHNDHEDLTMENEQDIMEPYCAAQDALLKVHDRIVEEDLFGGMTSDDDNENGF-VTAR 160
Query: 144 LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKK 203
LLVP++ +GC++GK G ++Q +RSETGA IR+L +HLP+CA+ +DELVQIS + V KK
Sbjct: 161 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADHLPTCAMSTDELVQISAKPDVAKK 220
Query: 204 ALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA------------- 250
AL ++++ LH NP R + + S S GP P +G
Sbjct: 221 ALYEVSTLLHQNP-RKDKPPSVPMPYSGQSFHPPGGPMKNLPPLGSPMWPHHNSSHSIPP 279
Query: 251 -PLMGPYG----GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAI 305
P+MG YG G+ D R + P S EFS++++C IGGVIGKGG+
Sbjct: 280 MPIMGRYGSQSSGFGPGGFDDVPRGHVAEP-----SAEFSMKILCSAGKIGGVIGKGGSN 334
Query: 306 INQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDS 365
+ ++Q++GA+I V+ +S E D+ +I VS+ E + S TI+A+++LQ + S+ E+
Sbjct: 335 VKVVQQDTGASIHVEDASAESDERVIRVSASEALWNPRSQTIDAILQLQNKTSDFSEKG- 393
Query: 366 GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQIS 425
+ TTRLLVP+S++GC++G+GG +I EMRR T+A+IR+ K+ PK ASED+E+VQIS
Sbjct: 394 ---TITTRLLVPSSKVGCILGQGGQVINEMRRRTQADIRVYSKDEKPKCASEDEELVQIS 450
Query: 426 GDLDLAKDALIQVMTRLR 443
G +AKDAL ++ +RLR
Sbjct: 451 GKFGVAKDALAEIASRLR 468
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 74/133 (55%), Gaps = 11/133 (8%)
Query: 322 SSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI---------ERDSGLISFTT 372
S D +T+ +++ + A +A++++ R E+ + ++G + T
Sbjct: 102 SRNHNDHEDLTMENEQDIMEPYCAAQDALLKVHDRIVEEDLFGGMTSDDDNENGFV--TA 159
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAK 432
RLLVP + +GCL+GK G +I +R T ANIR+LP ++LP A DE+VQIS D+AK
Sbjct: 160 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADHLPTCAMSTDELVQISAKPDVAK 219
Query: 433 DALIQVMTRLRAN 445
AL +V T L N
Sbjct: 220 KALYEVSTLLHQN 232
>gi|359386146|gb|AEV43362.1| poly C-binding protein [Citrus sinensis]
Length = 569
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 178/440 (40%), Positives = 267/440 (60%), Gaps = 42/440 (9%)
Query: 2 AGQRNSYGKRSHSQTDYADH-GPNKRRYTGDDRDQFIIG--PEDTVYRYLCPIRKIGSII 58
A +RN + KR ++Q G K ++ R+Q P DTVYR LCP RKIG +I
Sbjct: 3 ASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVI 62
Query: 59 GRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSA---------SDETNAFEDGDKFV 109
G+ G IVK LR +T++KI + +T+PGSEERV+ +YS+ D+ +A E + +
Sbjct: 63 GKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESM 122
Query: 110 SP---AQDALFKVHDRVIAEELRGDEDSDGGHQ---VTAKLLVPSDQIGCVIGKGGQIVQ 163
P AQDAL KVHDR+I E+L G SD ++ +TA+LLVP++ +GC++GK G ++Q
Sbjct: 123 EPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQ 182
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR----S 219
+RSETGA IR+L + LP CA+ +DE+VQISG+ +V K+AL ++++ LH NP + S
Sbjct: 183 RLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPS 242
Query: 220 QHLLASAISNSHSSS---------GSLVGPTAATPIVGI--APLMGPYGGYKGDTAGDWS 268
A N HS G+ P + + G+ P MG YG S
Sbjct: 243 SFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMG---S 299
Query: 269 RSLYSAPRDDLS--SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
S+ S P + S EFS++++C IGGVIGKGG + Q++QE+GA+I V+ + T+
Sbjct: 300 GSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDS 359
Query: 327 DDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIG 386
D+ +I S+ E + S TI+A+++LQ + SE E+ + TTRLLVP+S++GC++G
Sbjct: 360 DERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG----TITTRLLVPSSKVGCILG 415
Query: 387 KGGSIITEMRRLTKANIRIL 406
+GG +I EMRR T+A+IR++
Sbjct: 416 QGGHVINEMRRRTQADIRVV 435
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 106/214 (49%), Gaps = 26/214 (12%)
Query: 258 GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAI 317
G G G+WS S + + R++CP IGGVIGK G I+ +R+E+ A I
Sbjct: 21 GVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKI 80
Query: 318 KVDSSSTEGDDCLITVSS------KEFFEDTLSATIEAVVRLQPRCSEK----------I 361
V + ++ +I + S K +D SA ++P C+ + I
Sbjct: 81 TVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRII 140
Query: 362 ERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENL 411
E D G+ S T RLLVP + +GCL+GK G +I +R T ANIR+LP + L
Sbjct: 141 EEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRL 200
Query: 412 PKIASEDDEMVQISGDLDLAKDALIQVMTRLRAN 445
P A DEMVQISG ++AK AL +V T L N
Sbjct: 201 PPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQN 234
>gi|356518382|ref|XP_003527858.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 676
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 172/479 (35%), Positives = 261/479 (54%), Gaps = 54/479 (11%)
Query: 22 GPN---KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
GPN KRR + + P V+R LC +IG +IG+GG I+ Q+R +T K+RI
Sbjct: 10 GPNGRGKRRRSSGGFSSLGVSPGSVVFRLLCHASRIGGVIGKGGSIISQIRQETGVKLRI 69
Query: 79 GETVPGSEERVVTVYSASDET-----------NAFEDG--------------------DK 107
E VPG +ERV+T+ + ET N +DG +K
Sbjct: 70 EEAVPGCDERVITISGSEKETEEDNTEQGKEVNDNDDGGSEGKDREEKDDGDGNEDKREK 129
Query: 108 FVSPAQD--------ALFK----VHDRVIA---EELRGDEDSDGGHQVTAKLLVPSDQIG 152
P +D A++K V +R++ E GDE+S+ +LL+ + Q+G
Sbjct: 130 DAVPVEDSKSEKGNSAIWKAISLVFERMVEGVEETTEGDEESNKPSSFFLRLLILTAQVG 189
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
CV+GKGG +++ + +E+GAQIRIL + LP+CA SDE+VQISG VV+KAL ++ +L
Sbjct: 190 CVLGKGGSVIKRMAAESGAQIRILPKDKLPACASASDEIVQISGSVEVVRKALQSVSQQL 249
Query: 213 HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-GPYGGYKGDTAGDWSRSL 271
+NP R L++ + S S P + P GP+ +A
Sbjct: 250 LENPPRDHDSLSAKSTGPSSHSFGQFPPHNRSFSAQGEPFASGPHDISAFHSAAPLIPKF 309
Query: 272 YSAP---RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ A R + + RL+CP +G +IGKGGAII ++QE+ + IKV + + +D
Sbjct: 310 HEAAIHGRMRPLQEMLTFRLLCPAERVGNIIGKGGAIIKTVQQETASEIKVLEAPPDSED 369
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKG 388
C+I +S ED +S EAV R+Q R ++ I I R LV +++IGCL+GKG
Sbjct: 370 CVIVISGPAHPEDRISPVQEAVFRVQTRIAKPIPDAKDHI-MLARFLVSSTQIGCLLGKG 428
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
GSIITEMR+ + A+IRIL K+ +PK ASED+E++Q++G+++ DAL+Q+ TRL+ + F
Sbjct: 429 GSIITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEIEAVHDALLQITTRLKHHCF 487
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 121/221 (54%), Gaps = 26/221 (11%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E +R LCP ++G+IIG+GG I+K ++ +T S+I++ E P SE+ V+ + + +
Sbjct: 323 EMLTFRLLCPAERVGNIIGKGGAIIKTVQQETASEIKVLEAPPDSEDCVIVISGPAHPED 382
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
+SP Q+A+F+V R IA+ + +D H + A+ LV S QIGC++GKGG
Sbjct: 383 R-------ISPVQEAVFRVQTR-IAKPIPDAKD----HIMLARFLVSSTQIGCLLGKGGS 430
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
I+ +R ++GA IRIL + +P CA +E++Q++GE V AL QI +RL + R
Sbjct: 431 IITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEIEAVHDALLQITTRLKHHCFRDS 490
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
+ + SNS P + P PY G +G
Sbjct: 491 YPSVNYPSNS--------------PFLDQLPPFPPYLGRRG 517
>gi|302803919|ref|XP_002983712.1| hypothetical protein SELMODRAFT_445677 [Selaginella moellendorffii]
gi|300148549|gb|EFJ15208.1| hypothetical protein SELMODRAFT_445677 [Selaginella moellendorffii]
Length = 668
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 170/451 (37%), Positives = 254/451 (56%), Gaps = 55/451 (12%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LCP +IGS+IG+GG I+K LR T +KI+I + +PGS+ERV+ + + E ED
Sbjct: 62 FRILCPASRIGSVIGKGGSIIKTLRQQTGAKIKIADAIPGSDERVIIIGAFDAEGGGDED 121
Query: 105 -------------------------GDKFVSPAQDALFKVHDRVI-AEELRGD-EDSDG- 136
G PAQ ALFKVH R++ A++ D +DSD
Sbjct: 122 YPAGSGGGSAAALDKDDRAMDEYTNGRDVACPAQLALFKVHSRILDADKYEDDLDDSDSV 181
Query: 137 ----GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+V ++LVP +Q+GC++GK G+I++ +R ETG+QIRIL E LP CAL +DE+V
Sbjct: 182 EEDLSEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPREQLPVCALPTDEVV 241
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
Q+ G+ VK+AL I++RL DNP + + AS S + G A+ P +
Sbjct: 242 QVVGDRPSVKRALNAISTRLLDNPPKDRPSSASFQSGNFGGGSRSSGFPASEPYIPQHTS 301
Query: 253 MGPYGGYKGDT---AGDWSRSLYSAPRDDLSS-----------KEFSLRLVCPVANIGGV 298
+ P + + +GD L LS +E R++CP IG +
Sbjct: 302 LAPQTRLRAEPRSDSGDNGYQLLRPTAPGLSEFGTGRHLVPMDEELVFRILCPSEKIGNI 361
Query: 299 IGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCS 358
IGK I +++E+GA I V + ++ +I VS+ E +D LS EAV +Q
Sbjct: 362 IGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSAVESPDDDLSPAQEAVFHIQ---- 414
Query: 359 EKIERDSGLIS--FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIAS 416
+K+ D G S TRLLVP++ +GCL+GKGG+II+EMR T+A IR+L +E LP A
Sbjct: 415 DKLRDDGGETSERVVTRLLVPSNHVGCLLGKGGNIISEMRNSTRAIIRVLDREQLPLCAL 474
Query: 417 EDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
++DE+VQ+ G++ +A+DAL+Q+ +RLRANL+
Sbjct: 475 DNDEVVQVLGEIRVARDALVQITSRLRANLY 505
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 176/367 (47%), Gaps = 44/367 (11%)
Query: 11 RSHSQTDYADHGPNKRRYTGDDRDQFIIG------PEDTVYRYLCPIRKIGSIIGRGGEI 64
R+ ++D D+G R T +F G E+ V+R LCP KIG+IIG+
Sbjct: 309 RAEPRSDSGDNGYQLLRPTAPGLSEFGTGRHLVPMDEELVFRILCPSEKIGNIIGK---F 365
Query: 65 VKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVI 124
++ L+ +T +KI + + VPG EERV+ V +A E D +SPAQ+A+F + D+
Sbjct: 366 IQTLQEETGAKINVPDAVPGCEERVIIV-------SAVESPDDDLSPAQEAVFHIQDK-- 416
Query: 125 AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSC 184
LR D+ + +V +LLVPS+ +GC++GKGG I+ +R+ T A IR+L E LP C
Sbjct: 417 ---LR-DDGGETSERVVTRLLVPSNHVGCLLGKGGNIISEMRNSTRAIIRVLDREQLPLC 472
Query: 185 ALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSG-SLVGPTAA 243
AL +DE+VQ+ GE V + AL QI SRL N R + + S+S S G A+
Sbjct: 473 ALDNDEVVQVLGEIRVARDALVQITSRLRANLYREKTDRSDDYGYQRSTSPLSNFGLQAS 532
Query: 244 TPIVGIAPLMGP--------YGGYKG-----DTAGDWSRSLYSAPRDDLSSKEFSLRLVC 290
P AP P G Y G AG + R L + +L +V
Sbjct: 533 QPPGIQAPRSPPSWLLQQTERGAYNGLPRLTSYAGIERSYGLAGDRSALPTGLTNLSVVT 592
Query: 291 --------PVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
P V+G+ G + QI + SGA + + T D LI +S +
Sbjct: 593 STKIDVLIPEVTFSAVLGQNGDNLTQISKMSGAKVTLADGCTATGDRLIEISGTPDQTNI 652
Query: 343 LSATIEA 349
+EA
Sbjct: 653 AKTVVEA 659
>gi|356507955|ref|XP_003522728.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 678
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 168/481 (34%), Positives = 263/481 (54%), Gaps = 56/481 (11%)
Query: 22 GPN---KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
GPN KRR + + P V+R LC +IGS+IG+GG I+ Q+R++T K++I
Sbjct: 10 GPNGRGKRRKSSGGFSPLDVSPGSVVFRLLCHASRIGSVIGKGGSIISQIRLETGVKVKI 69
Query: 79 GETVPGSEERVVTVYSASDETNAF------------------EDGD-------------- 106
E VPG +ERV+T+ + E + +DG+
Sbjct: 70 EEAVPGCDERVITISGSDKEAEEYTAEQGKEVNDNDDVGSEGKDGEEKNGSDGNGNEDKE 129
Query: 107 -KFVSPAQD--------ALFK----VHDRVIA---EELRGDEDSDGGHQVTAKLLVPSDQ 150
K P +D A++K V +R++ E GDE+S+ +LL+ + Q
Sbjct: 130 EKDAVPVEDSKSEKGNSAIWKAISLVFERMVEGVEETTEGDEESNKSSSFFLRLLILTAQ 189
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
+GCV+GKGG +++ + +E+GAQIRIL + +P CA DE+VQISG VV+KAL ++
Sbjct: 190 VGCVLGKGGSVIKRMAAESGAQIRILPKDKVPVCASAFDEIVQISGSVEVVRKALQSVSQ 249
Query: 211 RLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL-MGPYGGYKGDTAGDWSR 269
+L +NP R L++ + S S P + P GP+ +A
Sbjct: 250 QLLENPPRDHESLSAKSTGPSSHSFGQFPPHNHSFAAQGEPFATGPHDISAFHSAPPLIP 309
Query: 270 SLYSAP---RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
+ A R + + RL+CPV +G +IGKGGAII ++QE+ + IKV + +
Sbjct: 310 KFHEAAIHGRTRPLQEMLTFRLLCPVERVGNIIGKGGAIIKTVQQETVSEIKVLEAPPDS 369
Query: 327 DDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIG 386
+DC+I +S ED +S EAV R+Q R ++ I D+ + R LV +++IGCL+G
Sbjct: 370 EDCVIVISGPAHPEDRVSPVQEAVFRVQTRIAKPIP-DANDHTMLARFLVSSNQIGCLLG 428
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
KGGSIITEMR+ + A+IRIL K+ +PK ASED+E++Q++G+++ +AL+Q+ TRL+ +
Sbjct: 429 KGGSIITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEIEAVHEALLQITTRLKHHF 488
Query: 447 F 447
F
Sbjct: 489 F 489
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 123/221 (55%), Gaps = 26/221 (11%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E +R LCP+ ++G+IIG+GG I+K ++ +T S+I++ E P SE+ V+ + + +
Sbjct: 325 EMLTFRLLCPVERVGNIIGKGGAIIKTVQQETVSEIKVLEAPPDSEDCVIVISGPAHPED 384
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
VSP Q+A+F+V R IA+ + D H + A+ LV S+QIGC++GKGG
Sbjct: 385 R-------VSPVQEAVFRVQTR-IAKPIPDAND----HTMLARFLVSSNQIGCLLGKGGS 432
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
I+ +R ++GA IRIL + +P CA +E++Q++GE V +AL QI +RL + R
Sbjct: 433 IITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEIEAVHEALLQITTRLKHHFFRDS 492
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
+ + SNS P + P PY G +G
Sbjct: 493 YPSVNYPSNS--------------PFLDQLPPFPPYLGRRG 519
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 251 PLMGPYG-GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQI 309
P GP G G + ++G +S D+S RL+C + IG VIGKGG+II+QI
Sbjct: 7 PNAGPNGRGKRRKSSGGFSPL-------DVSPGSVVFRLLCHASRIGSVIGKGGSIISQI 59
Query: 310 RQESGAAIKVDSSSTEGDDCLITVS 334
R E+G +K++ + D+ +IT+S
Sbjct: 60 RLETGVKVKIEEAVPGCDERVITIS 84
>gi|302814720|ref|XP_002989043.1| hypothetical protein SELMODRAFT_10869 [Selaginella moellendorffii]
gi|300143144|gb|EFJ09837.1| hypothetical protein SELMODRAFT_10869 [Selaginella moellendorffii]
Length = 630
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 170/452 (37%), Positives = 255/452 (56%), Gaps = 55/452 (12%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFE 103
++R LCP +IGS+IG+GG I+K LR T +KI+I + +PGS+ERV+ + + E E
Sbjct: 1 LFRILCPASRIGSVIGKGGSIIKTLRQQTGAKIKIADAIPGSDERVIIIGAFDAEGGGDE 60
Query: 104 D-------------------------GDKFVSPAQDALFKVHDRVI-AEELRGD-EDSDG 136
D G PAQ ALFKVH R++ A++ D +DSD
Sbjct: 61 DYPAGSGGGAPAALDKDDRAMDEYTNGRDVACPAQLALFKVHSRILDADKYEDDLDDSDS 120
Query: 137 -----GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
+V ++LVP +Q+GC++GK G+I++ +R ETG+QIRIL E LP CAL +DE+
Sbjct: 121 VEEDLSEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPREQLPVCALPTDEV 180
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
VQ+ G+ VK+AL I++RL DNP + + AS S + G A+ P +
Sbjct: 181 VQVVGDRPSVKRALNAISTRLLDNPPKDRPSSASFQSGNFGGGSRSSGFPASEPYIPQHT 240
Query: 252 LMGPYGGYKGDT---AGDWSRSLYSAPRDDLSS-----------KEFSLRLVCPVANIGG 297
+ P + + +GD L LS +E R++CP IG
Sbjct: 241 SLAPQTRLRAEPRSDSGDNGYQLLRPTAPGLSEFGTGRHLVPMDEELVFRILCPSEKIGN 300
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IGK I +++E+GA I V + ++ +I VS+ E +D LS EAV +Q
Sbjct: 301 IIGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSAVESPDDDLSPAQEAVFHIQ--- 354
Query: 358 SEKIERDSGLIS--FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIA 415
+K+ D G S TRLLVP++ +GCL+GKGG+II+EMR T+A IR+L +E LP A
Sbjct: 355 -DKLRDDGGETSERVVTRLLVPSNHVGCLLGKGGNIISEMRNSTRAIIRVLDREQLPLCA 413
Query: 416 SEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
++DE+VQ+ G++ +A+DAL+Q+ +RLRANL+
Sbjct: 414 LDNDEVVQVLGEIRVARDALVQITSRLRANLY 445
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/216 (39%), Positives = 126/216 (58%), Gaps = 22/216 (10%)
Query: 11 RSHSQTDYADHGPNKRRYTGDDRDQFIIG------PEDTVYRYLCPIRKIGSIIGRGGEI 64
R+ ++D D+G R T +F G E+ V+R LCP KIG+IIG+
Sbjct: 249 RAEPRSDSGDNGYQLLRPTAPGLSEFGTGRHLVPMDEELVFRILCPSEKIGNIIGK---F 305
Query: 65 VKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVI 124
++ L+ +T +KI + + VPG EERV+ V +A E D +SPAQ+A+F + D+
Sbjct: 306 IQTLQEETGAKINVPDAVPGCEERVIIV-------SAVESPDDDLSPAQEAVFHIQDK-- 356
Query: 125 AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSC 184
LR D+ + +V +LLVPS+ +GC++GKGG I+ +R+ T A IR+L E LP C
Sbjct: 357 ---LR-DDGGETSERVVTRLLVPSNHVGCLLGKGGNIISEMRNSTRAIIRVLDREQLPLC 412
Query: 185 ALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
AL +DE+VQ+ GE V + AL QI SRL N R +
Sbjct: 413 ALDNDEVVQVLGEIRVARDALVQITSRLRANLYREK 448
>gi|148909250|gb|ABR17725.1| unknown [Picea sitchensis]
Length = 435
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 168/422 (39%), Positives = 252/422 (59%), Gaps = 37/422 (8%)
Query: 9 GKRSHSQTDYADHGP-NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQ 67
GKR+ ++ D A++ NKRR +G R+Q + G + TVYR LCP IGS+IG+GG+++K
Sbjct: 7 GKRTRTEHDLAENNDRNKRRNSGTGREQTMPGADSTVYRILCPSNVIGSVIGKGGKVIKS 66
Query: 68 LRIDTKSKIRIGETVPGSEERVVTVYSA------SDETNAFEDGDKFVSPAQDALFKVHD 121
+R +T+SKIR+ + VPG +ERV+ ++S+ + + ++ ++ V PAQD L +VH
Sbjct: 67 MRQETRSKIRVADAVPGVDERVIVIFSSPLSKDKEKDDDDDDNENEPVCPAQDGLLRVHS 126
Query: 122 RVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL 181
++ E D D+D A+LLV + QIG +IGKGG +Q +RSE+GAQI+I + + L
Sbjct: 127 VIVQESSGKDNDADKKRPQDARLLVANSQIGSLIGKGGNNIQKLRSESGAQIQIPRKDEL 186
Query: 182 PSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ----HLLASAISNSHSSSGSL 237
P CA DELV ISG+A+ VKKAL +++ L +P + Q +L +S SG
Sbjct: 187 PGCAFSFDELVVISGDAAAVKKALYAVSAFLFKHPPKEQIPWSVILPETNQSSLPPSGVP 246
Query: 238 VGPTA---------------ATPIVGIAPLMGPYGGYKGDTAGDW--------SRSLYSA 274
P A + PI+G A + GGY + W S S +
Sbjct: 247 TFPPANYLPQGDSLFGHHNLSAPILGYASRLPGLGGYGSEAGSAWPLSNPALPSFSKFGN 306
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
+S+EFS+R++CP IGGVIGKGG I +R ++GA+I+V+ + TE D+ +I VS
Sbjct: 307 STTKKTSEEFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTESDERVIVVS 366
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITE 394
+ E +D +S TIEAV+ LQ + S ++D + +TR LVP+ IGCL+GKGG+II+E
Sbjct: 367 ATELADDRVSPTIEAVLLLQGKTSGTTDKDGAI---STRFLVPSKHIGCLLGKGGNIISE 423
Query: 395 MR 396
MR
Sbjct: 424 MR 425
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 85/173 (49%), Gaps = 17/173 (9%)
Query: 287 RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSAT 346
R++CP IG VIGKGG +I +RQE+ + I+V + D+ +I + S +D
Sbjct: 45 RILCPSNVIGSVIGKGGKVIKSMRQETRSKIRVADAVPGVDERVIVIFSSPLSKDKEKDD 104
Query: 347 IEAVVRLQPRCSEK----------IERDSGLISFT-------TRLLVPTSRIGCLIGKGG 389
+ +P C + ++ SG + RLLV S+IG LIGKGG
Sbjct: 105 DDDDNENEPVCPAQDGLLRVHSVIVQESSGKDNDADKKRPQDARLLVANSQIGSLIGKGG 164
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
+ I ++R + A I+I K+ LP A DE+V ISGD K AL V L
Sbjct: 165 NNIQKLRSESGAQIQIPRKDELPGCAFSFDELVVISGDAAAVKKALYAVSAFL 217
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 14/129 (10%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+ R LCP KIG +IG+GG +K +R DT + IR+ + S+ERV+ V +
Sbjct: 314 EEFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTESDERVIVV-------S 366
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A E D VSP +A+ + + G D DG ++ + LVPS IGC++GKGG
Sbjct: 367 ATELADDRVSPTIEAVLLLQGKT-----SGTTDKDGA--ISTRFLVPSKHIGCLLGKGGN 419
Query: 161 IVQNIRSET 169
I+ +R+ +
Sbjct: 420 IISEMRANS 428
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 366 GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
G S R+L P++ IG +IGKGG +I MR+ T++ IR+
Sbjct: 38 GADSTVYRILCPSNVIGSVIGKGGKVIKSMRQETRSKIRV 77
>gi|225443339|ref|XP_002264125.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|297735779|emb|CBI18466.3| unnamed protein product [Vitis vinifera]
Length = 704
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 159/444 (35%), Positives = 253/444 (56%), Gaps = 35/444 (7%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYS--------- 94
++R LCP K G +IG+GG I++Q R DT +KIRI ++V G +ERV+ + +
Sbjct: 57 LFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKREA 116
Query: 95 -----------------ASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD-- 135
++ N D SPAQ AL +V +R++ + +E
Sbjct: 117 SAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKKE 176
Query: 136 --GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
G V +LL PS+Q+GCV+G+GG+IV+ IR E+GAQIR+L +H+P+CA DEL+Q
Sbjct: 177 DLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDELIQ 236
Query: 194 ISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS-LVGPTAATPIVGI-AP 251
I+G V+KAL ++S L DNP A+A G+ + G + P G +
Sbjct: 237 ITGTFPAVRKALLLVSSCLQDNPRADATNSAAAKPTGGMLHGNGMPGQLDSFPQRGYGSS 296
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
L GP +G ++ ++ + R L +E +L+C +G +IGKGG+II ++
Sbjct: 297 LHGPDYHSRGYSSMPGPENIGANHRMVL-EEEVVFKLLCHFEKVGSLIGKGGSIIRFLQS 355
Query: 312 ESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFT 371
E+GA+IK+ ++ + D+ ++ +S++E E S +AV+R+ R +E I + G +
Sbjct: 356 ETGASIKIADAAPDSDERVVVISARENLEQKHSPAQDAVIRVHCRIAE-IGFEPGA-AVV 413
Query: 372 TRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLA 431
RLLV + +IGCL+GKGG II+EMRR T A+IRI KE +PK S++DE+VQ+ G L
Sbjct: 414 ARLLVHSQQIGCLLGKGGIIISEMRRATGASIRIFAKEQVPKCGSQNDELVQVIGSLQSV 473
Query: 432 KDALIQVMTRLRANLFDREGAVST 455
+DAL ++ +R+R +F + ++S
Sbjct: 474 QDALFRITSRIRETIFPLKPSISN 497
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 126/222 (56%), Gaps = 24/222 (10%)
Query: 1 MAGQRNSYGKRSHSQT----DYADHG----PNKRRYTGDDRDQFIIGPEDTVYRYLCPIR 52
M GQ +S+ +R + + DY G P + R ++ E+ V++ LC
Sbjct: 281 MPGQLDSFPQRGYGSSLHGPDYHSRGYSSMPGPENIGANHR---MVLEEEVVFKLLCHFE 337
Query: 53 KIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPA 112
K+GS+IG+GG I++ L+ +T + I+I + P S+ERVV + +A E+ ++ SPA
Sbjct: 338 KVGSLIGKGGSIIRFLQSETGASIKIADAAPDSDERVVVI-------SARENLEQKHSPA 390
Query: 113 QDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQ 172
QDA+ +VH R+ + + G V A+LLV S QIGC++GKGG I+ +R TGA
Sbjct: 391 QDAVIRVHCRI------AEIGFEPGAAVVARLLVHSQQIGCLLGKGGIIISEMRRATGAS 444
Query: 173 IRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
IRI E +P C ++DELVQ+ G V+ AL +I SR+ +
Sbjct: 445 IRIFAKEQVPKCGSQNDELVQVIGSLQSVQDALFRITSRIRE 486
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 27/186 (14%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
QV ++L P+ + G VIGKGG I++ R +TGA+IRI D+ + C + ++ I +A
Sbjct: 55 QVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRI--DDSVLGC---DERVILIVADA 109
Query: 199 SVVKKALCQIASRLHDNPSRSQHLLAS-----AISNSHSSSGSLVGPTAATPIVGIAPLM 253
K+ I ++ S +L S A+ + SS A +V + +
Sbjct: 110 VKSKREASAICGAEANDGEESANLSNSSPNPVAVDDDESS-------PAQQALVRVFERI 162
Query: 254 GPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQES 313
K D + DL + RL+ P +G V+G+GG I+ +IRQES
Sbjct: 163 -----LKVDEEREEKEKKE-----DLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQES 212
Query: 314 GAAIKV 319
GA I+V
Sbjct: 213 GAQIRV 218
>gi|356525090|ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 625
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 177/477 (37%), Positives = 266/477 (55%), Gaps = 55/477 (11%)
Query: 9 GKRSHSQTDY-ADHGPNKRRYTG-DDR--DQFIIGPEDTVYRYLCPIRKIGSIIGRGGEI 64
GKR HSQ D+ D KRR T DDR D+ I VYR LCP IGS+IG+ G++
Sbjct: 5 GKRYHSQRDHDGDRKHQKRRMTDRDDRGNDELI------VYRILCPDEVIGSVIGKNGKV 58
Query: 65 VKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKF-----VSPAQDALFKV 119
+ +R +T++K+++ + PGS++RV+T+Y E E D+F + AQDAL KV
Sbjct: 59 INSIRQETRAKVKVVDPFPGSKDRVITIYCYVKEKEDVEIDDEFAGKEPLCAAQDALLKV 118
Query: 120 HDRVIAEELR--GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL- 176
H IA + GD + + ++LVPS Q +IGK G ++ +RS+T A I++
Sbjct: 119 H-VAIANSIAAIGDSEKKRKDRDECQILVPSSQSANIIGKAGATIKKLRSKTRANIKVTA 177
Query: 177 KDEHLP--SCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS---- 230
KD P SCA+ D V I+GE+ VK+AL ++S ++ R L +A+ +
Sbjct: 178 KDAADPTHSCAMEFDNFVVITGESEAVKRALFAVSSIMYKFGPREDISLDTAVPEAPPSI 237
Query: 231 --------------HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
+ +S +V P A I+G A + GY D W +YS+
Sbjct: 238 IIPSDVPVYPPGGLYPASDPIVTPRAVPQIIG-ATNVPDLQGY-ADAGNSWP--MYSSAL 293
Query: 277 DDLS------SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCL 330
+S S+E +R++CP IG VIGKGG+ I +RQ SGA I+VD S D+CL
Sbjct: 294 PVVSGVGASRSEELIIRMLCPSDKIGRVIGKGGSTIKSMRQASGAHIEVDDSKANFDECL 353
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGS 390
I +++ E D S +EAV+ +Q + ++ E D+ + + RLLVP+ IGC+IGK GS
Sbjct: 354 IIITTTESPSDLKSMAVEAVLLMQGKIND--EDDT---TVSIRLLVPSKVIGCIIGKSGS 408
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
II E+R+ TKA++RI K + PK A +DE+V++ G +D +DALIQ++ RLR ++
Sbjct: 409 IINEIRKRTKADVRI-SKGDKPKCADANDELVEVGGSVDCVRDALIQIILRLRDDVL 464
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 160/338 (47%), Gaps = 47/338 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+ + R LCP KIG +IG+GG +K +R + + I + ++ +E ++ + + ++
Sbjct: 305 EELIIRMLCPSDKIGRVIGKGGSTIKSMRQASGAHIEVDDSKANFDECLIIITTTESPSD 364
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S A +A+ + ++ DED V+ +LLVPS IGC+IGK G
Sbjct: 365 -------LKSMAVEAVLLMQGKI------NDEDD---TTVSIRLLVPSKVIGCIIGKSGS 408
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD------ 214
I+ IR T A +RI K + P CA +DELV++ G V+ AL QI RL D
Sbjct: 409 IINEIRKRTKADVRISKGDK-PKCADANDELVEVGGSVDCVRDALIQIILRLRDDVLRER 467
Query: 215 ----NPS-RSQHLLASAISNSHSSSGSLVGPTAATPIV-----------GIAPLMGPYGG 258
NPS ++ L + S S V P AA P+V G+ PYGG
Sbjct: 468 DTGHNPSIGAESLYPGSAGLSLPSMMHSVPPVAA-PMVYDHRAESGAGLGMLSPSSPYGG 526
Query: 259 YKGDTAGD---WSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGA 315
Y GD S S Y+ +L ++ P +G V+GKGGA I IR+ SGA
Sbjct: 527 YGSLPMGDNGYGSMSSYATKLYGGLPPPSTLDMLIPANAVGKVLGKGGANIANIRKISGA 586
Query: 316 AIKV-DSSSTEGDDCLI---TVSSKEFFEDTLSATIEA 349
+I++ D+ S GD + T K E+ + A I A
Sbjct: 587 SIEISDNKSARGDRIALISGTPEQKRAAENLIQAFIMA 624
>gi|302142130|emb|CBI19333.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 180/471 (38%), Positives = 267/471 (56%), Gaps = 44/471 (9%)
Query: 10 KRSHSQTDYADHGPNKRRYTGDDRDQ---FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVK 66
KRS+ ++ +G K + +G Q I P V+R LCP K GS+IG+GG I+
Sbjct: 9 KRSYERSLTDSNGKGKWQKSGGFYSQNQSLKISPGTVVFRVLCPASKTGSVIGKGGTIIS 68
Query: 67 QLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG--------DKFVSPAQDALFK 118
Q+R +T K+R+ ETV G +ERVV + + +T A + +K +S Q AL
Sbjct: 69 QIRQETGVKVRVEETVSGCDERVVLITGSDKDTEADNEQSKEDDSQVEKGISSVQKALLL 128
Query: 119 VHDRVI---AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
V +R+ +E GDEDS+ +LLV S Q+GC++GKGG +++ + +E+GAQIRI
Sbjct: 129 VFERMAEGESETNGGDEDSNKSPTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRI 188
Query: 176 LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSG 235
L + LP CA SDELVQI+GE K+AL I+ +L +NP R +++ +N SS
Sbjct: 189 LPRDKLPLCASPSDELVQITGELDACKQALQSISQQLLENPPRDYDIVS---TNPTGSSS 245
Query: 236 SLVGPT-----AATPIVGIAPLMG-PYGGYKGDTAGDWSRSL-------------YSAPR 276
L GP A P P G PY DT D+ + + P+
Sbjct: 246 HLFGPPLPRSEAQPPPNYSFPAQGAPYAAGVRDT--DYHSNTPQLHKFHESGMPGWMKPQ 303
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
D L + RL+C +GG+IGKGG II ++ E+G IKV + +D +I +S
Sbjct: 304 DIL-----TFRLLCHDERVGGIIGKGGTIIKNLQNETGCEIKVLDGVPDSEDRVIFISGS 358
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
+D +S +AV+R+Q R I DS + RLLV +++IGCL+GKGG+II EMR
Sbjct: 359 AHPDDRISPAQDAVLRVQSRIVRAIP-DSKEKTVIARLLVSSTQIGCLLGKGGAIIAEMR 417
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
+L+ A+IRIL K+ +PK ASE++E+VQI+G+ + ++AL+Q+ TRLR + F
Sbjct: 418 KLSGAHIRILGKDQIPKCASENEEVVQINGEFEAVQEALLQITTRLRHHHF 468
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 124/223 (55%), Gaps = 18/223 (8%)
Query: 16 TDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSK 75
TDY + P ++ ++ + +R LC ++G IIG+GG I+K L+ +T +
Sbjct: 279 TDYHSNTPQLHKFHESGMPGWMKPQDILTFRLLCHDERVGGIIGKGGTIIKNLQNETGCE 338
Query: 76 IRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
I++ + VP SE+RV+ + ++ D +SPAQDA+ +V R++ R DS
Sbjct: 339 IKVLDGVPDSEDRVIFISGSAHP-------DDRISPAQDAVLRVQSRIV----RAIPDSK 387
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
V A+LLV S QIGC++GKGG I+ +R +GA IRIL + +P CA ++E+VQI+
Sbjct: 388 E-KTVIARLLVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASENEEVVQIN 446
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLV 238
GE V++AL QI +RL H A S +H S+ +
Sbjct: 447 GEFEAVQEALLQITTRLR------HHHFRDAFSVNHPSNPAFT 483
>gi|242078463|ref|XP_002444000.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
gi|241940350|gb|EES13495.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
Length = 629
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 159/437 (36%), Positives = 244/437 (55%), Gaps = 44/437 (10%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYS--ASDETNA 101
+YR LCP IGS+IG+ G ++ +R T +K+++ + PG+++RV+ VY + +A
Sbjct: 42 LYRILCPDSLIGSVIGKNGNVINAIRQQTSAKVKVVDPYPGADKRVILVYCYVKHRDLDA 101
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
D ++ V AQDAL +VH+ ++ R DSD + A +LVP+ Q VIGK G +
Sbjct: 102 EVDDNEPVCAAQDALLRVHNAIVDTLHRNRRDSDKKNTEEANILVPASQASNVIGKSGAV 161
Query: 162 VQNIRSETGAQIRI-LKD--EHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++++RS + A I++ KD + SCA+ D VQI+G A VKKAL +++ ++ +PS+
Sbjct: 162 IKHLRSTSRAFIKVSPKDPSDATHSCAMSFDNFVQITGGAEAVKKALFGVSTIIYKHPSK 221
Query: 219 SQHLLASAISNS------------HSSSGSLVGPTAATPIVGIAPLMGPYGGYK-----G 261
L ++I + +S P AA P + P + G
Sbjct: 222 ENIPLETSIPEPTPSIIIPSELPVYPASNFYSAPDAAIP--SVHPSLSILGSTHHVPELA 279
Query: 262 DTAGDWSR-----------SLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
A D R YSAP+ S E R++CP IG VIG+GGA I IR
Sbjct: 280 LPADDHGRLPIYPSILPVIPTYSAPK---CSGELEFRVLCPSGKIGLVIGRGGATIKNIR 336
Query: 311 QESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISF 370
QESGA I VD + + ++ +IT++S E +D SA +EAV+ LQ + ++ E D
Sbjct: 337 QESGARIDVDDAKNDREESIITITSTEAIDDVKSAAVEAVLLLQAKIND-YEDD----RM 391
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
RLLVP IGCLIG+GGSI+ +MR+ TKANI ++ K + P+ AS DE+V++SG+ D
Sbjct: 392 NLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANI-LISKGDKPRRASSSDELVEVSGEADK 450
Query: 431 AKDALIQVMTRLRANLF 447
+DAL+Q++ RLR ++
Sbjct: 451 LRDALVQIILRLREDVL 467
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 159/324 (49%), Gaps = 60/324 (18%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LCP KIG +IGRGG +K +R ++ ++I + + EE ++T+ S T A +D
Sbjct: 312 FRVLCPSGKIGLVIGRGGATIKNIRQESGARIDVDDAKNDREESIITITS----TEAIDD 367
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
S A +A+ + ++ D + D ++ +LLVP+ IGC+IG+GG IV +
Sbjct: 368 ---VKSAAVEAVLLLQAKI------NDYEDD---RMNLRLLVPNKVIGCLIGRGGSIVND 415
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLA 224
+R +T A I I K + P A SDELV++SGEA ++ AL QI RL ++ +L
Sbjct: 416 MRKKTKANILISKGDK-PRRASSSDELVEVSGEADKLRDALVQIILRLRED------VLK 468
Query: 225 SAISNSHS---------SSGSLVGPTAATP-IVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
++ + +S +S SL G + + P ++ P + P D G+ R+L
Sbjct: 469 ESVESQNSDRDGKLTVATSDSLYGSSLSLPALLPHNPQIAPLS---YDRRGESERALEVF 525
Query: 275 PR------------DD-------LSSKEFSLRL-----VCPVANIGGVIGKGGAIINQIR 310
PR DD +SK + L P + + V+GK G ++ IR
Sbjct: 526 PRTSSYGYSSMQVTDDGYGGLPSYTSKAYEEHLPRDEMTIPASGLSKVMGKRGTNLDNIR 585
Query: 311 QESGAAIKVDSSSTEGDDCLITVS 334
+ SGA I++ S + D + +S
Sbjct: 586 KISGAHIEIIESKSSRHDHIAYIS 609
>gi|225458964|ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 701
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 183/500 (36%), Positives = 269/500 (53%), Gaps = 73/500 (14%)
Query: 10 KRSHSQTDYADHGPNKRRYTGDDRDQ---FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVK 66
KRS+ ++ +G K + +G Q I P V+R LCP K GS+IG+GG I+
Sbjct: 9 KRSYERSLTDSNGKGKWQKSGGFYSQNQSLKISPGTVVFRVLCPASKTGSVIGKGGTIIS 68
Query: 67 QLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA-----FEDGD--------------- 106
Q+R +T K+R+ ETV G +ERVV + + +T A EDG+
Sbjct: 69 QIRQETGVKVRVEETVSGCDERVVLITGSDKDTEADNEQSKEDGEDTKAAEEVSDTKEPG 128
Query: 107 -----------------KFVSPAQDALFKVHDRVI---AEELRGDEDSDGGHQVTAKLLV 146
K +S Q AL V +R+ +E GDEDS+ +LLV
Sbjct: 129 ENDEDKESVPVEDSQVEKGISSVQKALLLVFERMAEGESETNGGDEDSNKSPTFVVRLLV 188
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALC 206
S Q+GC++GKGG +++ + +E+GAQIRIL + LP CA SDELVQI+GE K+AL
Sbjct: 189 LSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLPLCASPSDELVQITGELDACKQALQ 248
Query: 207 QIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPT-----AATPIVGIAPLMG-PYGGYK 260
I+ +L +NP R +++ +N SS L GP A P P G PY
Sbjct: 249 SISQQLLENPPRDYDIVS---TNPTGSSSHLFGPPLPRSEAQPPPNYSFPAQGAPYAAGV 305
Query: 261 GDTAGDWSRSL-------------YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
DT D+ + + P+D L + RL+C +GG+IGKGG II
Sbjct: 306 RDT--DYHSNTPQLHKFHESGMPGWMKPQDIL-----TFRLLCHDERVGGIIGKGGTIIK 358
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL 367
++ E+G IKV + +D +I +S +D +S +AV+R+Q R I DS
Sbjct: 359 NLQNETGCEIKVLDGVPDSEDRVIFISGSAHPDDRISPAQDAVLRVQSRIVRAIP-DSKE 417
Query: 368 ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD 427
+ RLLV +++IGCL+GKGG+II EMR+L+ A+IRIL K+ +PK ASE++E+VQI+G+
Sbjct: 418 KTVIARLLVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASENEEVVQINGE 477
Query: 428 LDLAKDALIQVMTRLRANLF 447
+ ++AL+Q+ TRLR + F
Sbjct: 478 FEAVQEALLQITTRLRHHHF 497
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 124/223 (55%), Gaps = 18/223 (8%)
Query: 16 TDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSK 75
TDY + P ++ ++ + +R LC ++G IIG+GG I+K L+ +T +
Sbjct: 308 TDYHSNTPQLHKFHESGMPGWMKPQDILTFRLLCHDERVGGIIGKGGTIIKNLQNETGCE 367
Query: 76 IRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
I++ + VP SE+RV+ + ++ D +SPAQDA+ +V R++ R DS
Sbjct: 368 IKVLDGVPDSEDRVIFISGSAHP-------DDRISPAQDAVLRVQSRIV----RAIPDSK 416
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
V A+LLV S QIGC++GKGG I+ +R +GA IRIL + +P CA ++E+VQI+
Sbjct: 417 E-KTVIARLLVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASENEEVVQIN 475
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLV 238
GE V++AL QI +RL H A S +H S+ +
Sbjct: 476 GEFEAVQEALLQITTRLR------HHHFRDAFSVNHPSNPAFT 512
>gi|449433573|ref|XP_004134572.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 625
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 168/467 (35%), Positives = 255/467 (54%), Gaps = 41/467 (8%)
Query: 9 GKRSHSQTDY-ADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQ 67
GKR + Q DY D+ KRR T ++D ++ E VYR LCP IGS+IG+ G+++
Sbjct: 4 GKRPYGQRDYNGDNKGYKRRIT--EQDDWV-SDELVVYRILCPDEVIGSVIGKSGKVINS 60
Query: 68 LRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKF-----VSPAQDALFKVHDR 122
+R +T++KI++ + PG+++RV+T++ + E D+F + AQDAL KVH
Sbjct: 61 IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVEVDDEFNDRQTLCAAQDALLKVHAA 120
Query: 123 VIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI-LKDEH 180
+ GD D + ++L+PS Q VIGK G ++ +RS+T I+I KD
Sbjct: 121 IANALASAGDLDRKQRDKEQCQILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDAT 180
Query: 181 LP--SCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS-------- 230
P SCA+ D I+GE V++AL I+S ++ P R + L + ++ +
Sbjct: 181 DPIHSCAMDFDNFAVIAGEPEGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPNIIIPS 240
Query: 231 ----HSSSGSLVGPTAATPIVGIAPLMGPYG-------GYKGDTAGDWSRSLYSAP---R 276
+S+ G P I P++G G+ +S SL P
Sbjct: 241 DVPLYSAGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPESGNAWPLYSSSLPVVPGGIS 300
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
S+E +R++CP NIG VIGKGG I IRQ SGA ++VD + + D+C+IT+SS
Sbjct: 301 GHPPSEELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSF 360
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
E +D S +E V+ LQ EKI D G + RLL+P+ IGC+IGK GSII E+R
Sbjct: 361 ESLDDLKSMAVETVLLLQ----EKINDDEGG-TVIMRLLIPSKVIGCIIGKSGSIINEIR 415
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
+ T+A+IRI + L K AS DE+V+++G + +DAL+Q++ RLR
Sbjct: 416 KSTRADIRISKGDKL-KCASSSDELVEVTGKVGCVRDALVQIVLRLR 461
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 156/337 (46%), Gaps = 46/337 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+ V R LCP IG +IG+GG +K +R + +++ + +T +E ++T+ S
Sbjct: 306 EELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISS------ 359
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
FE D S A + + + +++ + D G V +LL+PS IGC+IGK G
Sbjct: 360 -FESLDDLKSMAVETVLLLQEKI---------NDDEGGTVIMRLLIPSKVIGCIIGKSGS 409
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
I+ IR T A IRI K + L CA SDELV+++G+ V+ AL QI RL D+ + +
Sbjct: 410 IINEIRKSTRADIRISKGDKL-KCASSSDELVEVTGKVGCVRDALVQIVLRLRDDALKER 468
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG----------------------- 257
+ ++ + S S + + + ++P P G
Sbjct: 469 DVGHNSAIVTDSMYSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGVLSSSGLYGSG 528
Query: 258 -GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA 316
GD + S S L SL ++ P G VIGKGGA I IR+ SGA
Sbjct: 529 SLSMGDNGYGYMSSYSSKLYGGLPPPS-SLEMLIPANAAGKVIGKGGANIANIRKISGAL 587
Query: 317 IKV-DSSSTEGDDCLI---TVSSKEFFEDTLSATIEA 349
I++ DS S+ GD + T K E+ + A I A
Sbjct: 588 IEISDSKSSRGDRIALISGTSEQKRTAENLIQAFIMA 624
>gi|147845094|emb|CAN78473.1| hypothetical protein VITISV_026793 [Vitis vinifera]
Length = 709
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 180/493 (36%), Positives = 263/493 (53%), Gaps = 59/493 (11%)
Query: 10 KRSHSQTDYADHGPNKRRYTGDDRDQ---FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVK 66
KRS+ ++ +G K + +G Q I P V+R LCP K GS+IG+GG I+
Sbjct: 9 KRSYERSLTDSNGKGKWQKSGGFYSQNQSLKISPGTVVFRVLCPASKTGSVIGKGGTIIS 68
Query: 67 QLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA-----FEDGD--------------- 106
Q+R +T K+R+ ETV G +ERVV + + +T A EDG+
Sbjct: 69 QIRQETGVKVRVEETVSGCDERVVLITGSDKDTEADNEQSKEDGEDTKAAEEVSDTKEPG 128
Query: 107 -----------------KFVSPAQDALFKVHDRVI---AEELRGDEDSDGGHQVTAKLLV 146
K +S Q AL V +R+ +E GDEDS+ +LLV
Sbjct: 129 ENDEDKESVPVEDSQVEKGISSVQKALLLVFERMAEGESETNGGDEDSNKSPTFVVRLLV 188
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALC 206
S Q+GC++GKGG +++ + +E+GAQIRIL + LP CA SDELVQI+GE K+AL
Sbjct: 189 LSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLPLCASPSDELVQITGELDACKQALQ 248
Query: 207 QIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPT-----AATPIVGIAPLMG-PYGG-- 258
I+ +L +NP R +++ +N SS L GP A P P G PY
Sbjct: 249 SISQQLLENPPRDYDIVS---TNPTGSSSHLFGPPLPRSEAQPPPNYSFPAQGAPYAAGV 305
Query: 259 ----YKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
Y +T P + RL+C +GG+IGKGG II ++ E+G
Sbjct: 306 RDTDYHSNTPQLHKFHESGMPGXMKPQDILTFRLLCHDERVGGIIGKGGTIIKNLQNETG 365
Query: 315 AAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRL 374
IKV + +D +I +S +D +S +AV+R+Q R I DS + RL
Sbjct: 366 CEIKVLDGVPDSEDRVIFISGSAHPDDRISPAQDAVLRVQSRIVRAIP-DSKEKTVIARL 424
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
LV +++IGCL+GKGG+II EMR+L+ A+IRIL K+ +PK ASE++E+VQI+G+ + ++A
Sbjct: 425 LVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASENEEVVQINGEFEAVQEA 484
Query: 435 LIQVMTRLRANLF 447
L+Q+ TRLR + F
Sbjct: 485 LLQITTRLRHHHF 497
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 128/231 (55%), Gaps = 20/231 (8%)
Query: 16 TDYADHGPNKRRYTGDDRDQFIIGPEDTV-YRYLCPIRKIGSIIGRGGEIVKQLRIDTKS 74
TDY + P ++ + + P+D + +R LC ++G IIG+GG I+K L+ +T
Sbjct: 308 TDYHSNTPQLHKFH-ESGMPGXMKPQDILTFRLLCHDERVGGIIGKGGTIIKNLQNETGC 366
Query: 75 KIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDS 134
+I++ + VP SE+RV+ + ++ D +SPAQDA+ +V R++ R DS
Sbjct: 367 EIKVLDGVPDSEDRVIFISGSAHP-------DDRISPAQDAVLRVQSRIV----RAIPDS 415
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
V A+LLV S QIGC++GKGG I+ +R +GA IRIL + +P CA ++E+VQI
Sbjct: 416 KE-KTVIARLLVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASENEEVVQI 474
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATP 245
+GE V++AL QI +RL H A S +H S+ + P
Sbjct: 475 NGEFEAVQEALLQITTRLR------HHHFRDAFSVNHPSNPAFTDQVPPFP 519
>gi|449525363|ref|XP_004169687.1| PREDICTED: KH domain-containing protein At4g18375-like, partial
[Cucumis sativus]
Length = 531
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 168/467 (35%), Positives = 255/467 (54%), Gaps = 41/467 (8%)
Query: 9 GKRSHSQTDY-ADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQ 67
GKR + Q DY D+ KRR T ++D ++ E VYR LCP IGS+IG+ G+++
Sbjct: 4 GKRPYGQRDYNGDNKGYKRRIT--EQDDWV-SDELVVYRILCPDEVIGSVIGKSGKVINS 60
Query: 68 LRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKF-----VSPAQDALFKVHDR 122
+R +T++KI++ + PG+++RV+T++ + E D+F + AQDAL KVH
Sbjct: 61 IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVEVDDEFNDRQTLCAAQDALLKVHAA 120
Query: 123 VIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI-LKDEH 180
+ GD D + ++L+PS Q VIGK G ++ +RS+T I+I KD
Sbjct: 121 IANALASAGDLDRKQRDKEQCQILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDAT 180
Query: 181 LP--SCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS-------- 230
P SCA+ D I+GE V++AL I+S ++ P R + L + ++ +
Sbjct: 181 DPIHSCAMDFDNFAVIAGEPEGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPNIIIPS 240
Query: 231 ----HSSSGSLVGPTAATPIVGIAPLMGPYG-------GYKGDTAGDWSRSLYSAP---R 276
+S+ G P I P++G G+ +S SL P
Sbjct: 241 DVPLYSAGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPESGNAWPLYSSSLPVVPGGIS 300
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
S+E +R++CP NIG VIGKGG I IRQ SGA ++VD + + D+C+IT+SS
Sbjct: 301 GHPPSEELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSF 360
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
E +D S +E V+ LQ EKI D G + RLL+P+ IGC+IGK GSII E+R
Sbjct: 361 ESLDDLKSMAVETVLLLQ----EKINDDEGG-TVIMRLLIPSKVIGCIIGKSGSIINEIR 415
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
+ T+A+IRI + L K AS DE+V+++G + +DAL+Q++ RLR
Sbjct: 416 KSTRADIRISKGDKL-KCASSSDELVEVTGKVGCVRDALVQIVLRLR 461
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 96/175 (54%), Gaps = 17/175 (9%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+ V R LCP IG +IG+GG +K +R + +++ + +T +E ++T+ S
Sbjct: 306 EELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISS------ 359
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
FE D S A + + + +++ + D G V +LL+PS IGC+IGK G
Sbjct: 360 -FESLDDLKSMAVETVLLLQEKI---------NDDEGGTVIMRLLIPSKVIGCIIGKSGS 409
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
I+ IR T A IRI K + L CA SDELV+++G+ V+ AL QI RL D+
Sbjct: 410 IINEIRKSTRADIRISKGDKL-KCASSSDELVEVTGKVGCVRDALVQIVLRLRDD 463
>gi|357447239|ref|XP_003593895.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|357447243|ref|XP_003593897.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482943|gb|AES64146.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482945|gb|AES64148.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 631
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 167/478 (34%), Positives = 262/478 (54%), Gaps = 52/478 (10%)
Query: 9 GKRSHSQTD------YADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGG 62
GKR+ Q D D+ KRR +DRD+ G E YR LCP IGS+IG+ G
Sbjct: 5 GKRNRQQRDGDRGGRNWDNKNQKRRV--NDRDERDKG-ELIAYRILCPNEVIGSVIGKNG 61
Query: 63 EIVKQLRIDTKSKIRIGETVPGSEERVVTVY-----SASDETNAFEDGDKFVSPAQDALF 117
+++ +R ++++K+++ + PG++ RV+T++ E D +K + AQDAL
Sbjct: 62 KVINSIRQESRAKVKVVDPFPGAKHRVITIFCHVKNKEEIEIEDEFDNEKPLCAAQDALI 121
Query: 118 KVHDRVIAE-ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
KVH + E GD + ++ ++LVPS Q +IGK G ++ +R +T I+++
Sbjct: 122 KVHSAISNSIETAGDSEKKRKNKDECQILVPSSQSAILIGKAGATIKQLRVKTRTNIKVV 181
Query: 177 -KDEHLP--SCALRSDELVQISGEASVVKKALCQIASRLHD-NPSRSQHLLASAISNSHS 232
KD P SCA+ D V + GE+ VK+AL +++ ++ +P L + HS
Sbjct: 182 PKDAADPEHSCAMEFDNFVLV-GESEAVKRALFAVSTIMYKFSPKEDIPLDTTVPETPHS 240
Query: 233 -----------------SSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
+S +V P + ++G + +GGY DT W LYS+P
Sbjct: 241 IIIPSELPIYPPGGLYPASDPIVQPRSFPQLIGATTMQDLHGGY-ADTGNTWP--LYSSP 297
Query: 276 RDDLSS------KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDC 329
+SS +E +R++CP IG +IGKGG I ++RQ SGA I+VD S D+C
Sbjct: 298 LPVVSSLGASQSEELIVRMLCPSDKIGQLIGKGGGTIKRMRQASGARIEVDDSKARHDEC 357
Query: 330 LITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGG 389
LIT+++ E D S +EAV+ LQ EKI D + RLLVP+ IGC+IG+ G
Sbjct: 358 LITITATESTSDLKSVAVEAVLLLQ----EKIN-DEDDAPVSIRLLVPSKVIGCIIGRSG 412
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
+II E+R+ TKA+I+I + N PK A ++DE+V++ G++D +DALIQ++ RLR ++
Sbjct: 413 AIINEIRKRTKADIQI-SRSNKPKYADDNDELVEVVGEVDCVRDALIQIVLRLREDVL 469
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 158/342 (46%), Gaps = 54/342 (15%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+ + R LCP KIG +IG+GG +K++R + ++I + ++ +E ++T+
Sbjct: 310 EELIVRMLCPSDKIGQLIGKGGGTIKRMRQASGARIEVDDSKARHDECLITI-------T 362
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A E S A +A+ + +++ DED V+ +LLVPS IGC+IG+ G
Sbjct: 363 ATESTSDLKSVAVEAVLLLQEKI------NDEDD---APVSIRLLVPSKVIGCIIGRSGA 413
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
I+ IR T A I+I + P A +DELV++ GE V+ AL QI RL ++ +++
Sbjct: 414 IINEIRKRTKADIQISRSNK-PKYADDNDELVEVVGEVDCVRDALIQIVLRLREDVLKNK 472
Query: 221 HLLASAISNSHSSSGSLVGPTA---ATPIVGIAPLMGPYGGYKGDTAG------DWSRSL 271
+ N H S SL ++ A P++ P P Y T SRS
Sbjct: 473 DI----DHNRHIGSESLYASSSVLSAPPMLSSIPATAPALAYDQRTGSGTGLGMHSSRSH 528
Query: 272 YSAPRDDLSSKEF--------------------SLRLVCPVANIGGVIGKGGAIINQIRQ 311
Y + + +L +V P +G V+GKGGA + IR+
Sbjct: 529 YGYDSYSMEDNGYGSMSSYATNLYEGHRLPPLSTLEMVVPANAVGKVMGKGGANLANIRK 588
Query: 312 ESGAAIKV-DSSSTEGDDCLI---TVSSKEFFEDTLSATIEA 349
SGA +++ +S S GD + T K E+ + A I A
Sbjct: 589 ISGATVEISESKSYRGDRVALISGTSEEKRAAENLIQAFIMA 630
>gi|413917022|gb|AFW56954.1| hypothetical protein ZEAMMB73_179405 [Zea mays]
Length = 632
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 161/436 (36%), Positives = 243/436 (55%), Gaps = 47/436 (10%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFE 103
+YR LCP IGS+IG+ G ++ +R T +K+++ + PG+++RV+ VY +
Sbjct: 42 LYRILCPDSLIGSVIGKHGNVINAIRHQTSAKVKVVDPYPGADKRVILVYCYVKHRDLDA 101
Query: 104 DGD--KFVSPAQDALFKVHDRVI--AEEL-RGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
+GD + V AQDAL +VH+ ++ + L + +DSD A +LVP+ Q VIGK
Sbjct: 102 EGDDNEPVCAAQDALLRVHNAIVDALQTLHKNHKDSDKKSTEEANILVPASQASNVIGKS 161
Query: 159 GQIVQNIRSETGAQIRI-LKDEHLP--SCALRSDELVQISGEASVVKKALCQIASRLHDN 215
G +++++RS + A I++ KD P SCA+ D VQI+G A VKKAL +++ ++ +
Sbjct: 162 GAVIKHLRSTSRAFIKVSPKDPSDPTHSCAMSFDNFVQITGGAEAVKKALFGVSTIIYKH 221
Query: 216 PSRSQHLLASAISNS------------HSSSGSLVGPTAATPIVGIAPLMGPYGGYK--- 260
PS+ L ++I + + +S P AA P + P M G +
Sbjct: 222 PSKENIPLETSIPDPTPSIIIPSELPVYPASNFYSAPDAAIP--SVHPSMSVLGSTRHVP 279
Query: 261 --GDTAGDWSR-----------SLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
A D R YSAP+ S E R++CP IG VIG+GGA I
Sbjct: 280 ELAVPADDHGRLPIYQSILPVIPTYSAPK---CSGELEFRVLCPGGKIGLVIGRGGATIK 336
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL 367
IRQESGA I VD + + ++ +IT+ S E +D SA +EAV+ LQ + + DS
Sbjct: 337 NIRQESGARIDVDDAKNDKEESIITIISTESTDDVKSAAVEAVLLLQAKIN-----DSED 391
Query: 368 ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD 427
RLLVP IGCLIG+GGSI+ +MR+ TKANI ++ K + P+ AS DE+V++SG+
Sbjct: 392 DRMNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANI-LISKGDKPRRASSSDELVEVSGE 450
Query: 428 LDLAKDALIQVMTRLR 443
D +DAL+Q++ RLR
Sbjct: 451 ADKLRDALVQIILRLR 466
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 149/314 (47%), Gaps = 70/314 (22%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LCP KIG +IGRGG +K +R ++ ++I + + EE ++T+ S E
Sbjct: 315 FRVLCPGGKIGLVIGRGGATIKNIRQESGARIDVDDAKNDKEESIITIIST-------ES 367
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
D S A +A+ + ++ D + D ++ +LLVP+ IGC+IG+GG IV +
Sbjct: 368 TDDVKSAAVEAVLLLQAKI------NDSEDD---RMNLRLLVPNKVIGCLIGRGGSIVND 418
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---------- 214
+R +T A I I K + P A SDELV++SGEA ++ AL QI RL +
Sbjct: 419 MRKKTKANILISKGDK-PRRASSSDELVEVSGEADKLRDALVQIILRLREAVLKESVESQ 477
Query: 215 NPSRSQHLLASAISNSHSSSGSLVGPTAATPIV-----GIAPLMGPYGGYKGDTAGDWSR 269
N R L +A S SL G + P + IAPL GY D G+ R
Sbjct: 478 NSDRDGQLTVAA-------SDSLYGSSLPLPALLPHNQQIAPL-----GY--DRRGEPER 523
Query: 270 SLYSAPR------------DD-------LSSKEFS-----LRLVCPVANIGGVIGKGGAI 305
+L PR DD +SK + L + P + I V+GK G
Sbjct: 524 ALEVFPRTSSYGYSSMQVTDDGYGGLPSYASKAYEEHVPRLEMTVPASGISKVMGKHGTN 583
Query: 306 INQIRQESGAAIKV 319
++ IR+ SGA I++
Sbjct: 584 LDNIRKISGAHIEI 597
>gi|357466759|ref|XP_003603664.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355492712|gb|AES73915.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 662
Score = 240 bits (613), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 171/483 (35%), Positives = 255/483 (52%), Gaps = 80/483 (16%)
Query: 23 PNKRRYTGDDRDQFIIGPEDT----VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
P +R+ +G + P D V+R LCP KIG +IG+GG I+ Q+R +T K++I
Sbjct: 14 PKRRKPSG------VFSPLDVSSSVVFRLLCPASKIGGVIGKGGSIISQIRHETGVKVKI 67
Query: 79 GETVPGSEERVVTVYSASDETNA-----FEDGDKFVSPAQD------------------- 114
E VPG EERV+T S+E +A D D+ S +D
Sbjct: 68 EEPVPGCEERVITFLKESEEGSAEQGKEVNDNDESESKVKDDEEKGNGDDNEDKDSVSVE 127
Query: 115 ---------------ALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
A+ V +RV AE+ GDE G +LL+ S+Q+GC++GKGG
Sbjct: 128 DSQSEKVNSNPTIMRAVMLVFERV-AEDEGGDESKKG--YFGLRLLILSNQVGCILGKGG 184
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+++ + +E+GAQIRIL E +P+CA SDELVQI+G VV++AL + +L +N R
Sbjct: 185 SVIKRMSAESGAQIRILPKEEIPACASDSDELVQITGGVEVVRRALQSVFQQLVENSPRD 244
Query: 220 QHLLASAISNSHSSSGSLVGPTAAT---------------PIVGIAPLMGPYGGYKGDTA 264
L + ++ S S P T P+ AP++ + ++G
Sbjct: 245 HESLPTNLTGPSSHSYGQFPPNKRTFAGQGASFATGPNEIPVFHSAPMIPKF--HEGAIL 302
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
G R + + RL+CP ++G +IGKGG+II ++QE+ + IKV +
Sbjct: 303 G----------RMRPPPEILTFRLLCPSESVGNLIGKGGSIIKMLQQETASEIKVIEAIP 352
Query: 325 EGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCL 384
+DC+I +S +D +S EA+ R+Q R S + DS S R++V + IGCL
Sbjct: 353 GSEDCIIIISGPAHPDDRISPVQEAIFRVQNRISRAM-LDSKEHSMLARVIVSSKHIGCL 411
Query: 385 IGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRA 444
+GKGGSII EMR L+ A+IR+L K+ PK SEDDE++Q+SG ++ DAL+Q+ TRLR
Sbjct: 412 LGKGGSIIAEMRNLSGAHIRMLGKDKGPKCVSEDDEVIQVSGVIEAVHDALLQITTRLRN 471
Query: 445 NLF 447
N F
Sbjct: 472 NFF 474
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 127/252 (50%), Gaps = 42/252 (16%)
Query: 6 NSYGKRSHSQTDYADHGPNKRRYTGDD----------------------RDQFIIG---- 39
N G SHS Y PNKR + G + I+G
Sbjct: 251 NLTGPSSHS---YGQFPPNKRTFAGQGASFATGPNEIPVFHSAPMIPKFHEGAILGRMRP 307
Query: 40 -PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
PE +R LCP +G++IG+GG I+K L+ +T S+I++ E +PGSE+ ++ + +
Sbjct: 308 PPEILTFRLLCPSESVGNLIGKGGSIIKMLQQETASEIKVIEAIPGSEDCIIIISGPAHP 367
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
D +SP Q+A+F+V +R+ L E H + A+++V S IGC++GKG
Sbjct: 368 -------DDRISPVQEAIFRVQNRISRAMLDSKE-----HSMLARVIVSSKHIGCLLGKG 415
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G I+ +R+ +GA IR+L + P C DE++Q+SG V AL QI +RL +N R
Sbjct: 416 GSIIAEMRNLSGAHIRMLGKDKGPKCVSEDDEVIQVSGVIEAVHDALLQITTRLRNNFFR 475
Query: 219 SQHLLASAISNS 230
A+ SNS
Sbjct: 476 DAFPSANFPSNS 487
>gi|297742912|emb|CBI35779.3| unnamed protein product [Vitis vinifera]
Length = 340
Score = 240 bits (613), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 138/293 (47%), Positives = 183/293 (62%), Gaps = 40/293 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R +CPIR IG +I +GG + Q+R ++ + I++ T + + A + + F G
Sbjct: 46 RLVCPIRNIGGVIRKGGVFINQIRRESGAIIKVDSTSAAEADDCLVTILAKERLH-FPRG 104
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ + L+++ R+ D + G T +LLV +QIGCVIGKGGQI+Q+I
Sbjct: 105 PQ--TSHCIFLYRMCMRL------WDWNCPSG-TFTVRLLVSFNQIGCVIGKGGQIIQSI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
RSE+GAQIRILKD+HLPSC+L S+EL+QIS E S+V+K L QIASRLHDNPSRSQHL
Sbjct: 156 RSESGAQIRILKDDHLPSCSLSSNELIQISKEPSIVRKILYQIASRLHDNPSRSQHLFVY 215
Query: 226 AISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFS 285
+ +SSSGSL+G T+ PI+ D+ SSKEFS
Sbjct: 216 VVPIGYSSSGSLMGLTSGAPIM-----------------------------DEASSKEFS 246
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-TEGDDCLITVSSKE 337
L LVCP+ NIGG+IGKG IINQIRQE GA IKVDS+S E +DCL+T+S+KE
Sbjct: 247 LCLVCPIGNIGGMIGKGDVIINQIRQEFGATIKVDSTSVVEANDCLVTISAKE 299
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 105/177 (59%), Gaps = 1/177 (0%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-TEGDDCLITVSSKEFFEDT 342
FSLRLVCP+ NIGGVI KGG INQIR+ESGA IKVDS+S E DDCL+T+ +KE
Sbjct: 43 FSLRLVCPIRNIGGVIRKGGVFINQIRRESGAIIKVDSTSAAEADDCLVTILAKERLHFP 102
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKAN 402
+ L C + + +FT RLLV ++IGC+IGKGG II +R + A
Sbjct: 103 RGPQTSHCIFLYRMCMRLWDWNCPSGTFTVRLLVSFNQIGCVIGKGGQIIQSIRSESGAQ 162
Query: 403 IRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPV 459
IRIL ++LP + +E++QIS + + + L Q+ +RL N + VP+
Sbjct: 163 IRILKDDHLPSCSLSSNELIQISKEPSIVRKILYQIASRLHDNPSRSQHLFVYVVPI 219
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 125/333 (37%), Gaps = 102/333 (30%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
+ +L+ P IG VI KGG + IR E+GA I+K + S A D LV I +
Sbjct: 44 SLRLVCPIRNIGGVIRKGGVFINQIRRESGA---IIKVDS-TSAAEADDCLVTILAK--- 96
Query: 201 VKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYK 260
RLH P GP + I M +
Sbjct: 97 ---------ERLH-FPR---------------------GPQTSHCIFLYRMCMRLW---- 121
Query: 261 GDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
DW + S F++RL+ IG VIGKGG II IR ESGA I++
Sbjct: 122 -----DW----------NCPSGTFTVRLLVSFNQIGCVIGKGGQIIQSIRSESGAQIRIL 166
Query: 321 SSSTEGDDCL--ITVSSKEFFEDTLSATI--EAVVRLQPRCSEKIERDSGLI-------- 368
DD L ++SS E + + +I + + ++ R + R L
Sbjct: 167 K-----DDHLPSCSLSSNELIQISKEPSIVRKILYQIASRLHDNPSRSQHLFVYVVPIGY 221
Query: 369 ----------------------SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
F+ L+ P IG +IGKG II ++R+ A I++
Sbjct: 222 SSSGSLMGLTSGAPIMDEASSKEFSLCLVCPIGNIGGMIGKGDVIINQIRQEFGATIKV- 280
Query: 407 PKENLPKIASEDDEMVQISGD--LDLAKDALIQ 437
+ + +D +V IS L L K L++
Sbjct: 281 ---DSTSVVEANDCLVTISAKERLHLFKVNLLE 310
>gi|224076902|ref|XP_002305041.1| predicted protein [Populus trichocarpa]
gi|222848005|gb|EEE85552.1| predicted protein [Populus trichocarpa]
Length = 623
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 162/483 (33%), Positives = 267/483 (55%), Gaps = 47/483 (9%)
Query: 9 GKRSHSQTDYADHGPNKRRYT---GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
GKRS Q DY N++R+ G D D+ + VYR LCP IGS+IG+ G+++
Sbjct: 5 GKRSRPQRDYDGDTNNQKRHKDNKGTDNDELV------VYRILCPDEVIGSVIGKSGKVI 58
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKF-----VSPAQDALFKVH 120
+R ++++++++ + PG+ RV+T+Y E + D F + PAQDAL KVH
Sbjct: 59 NSIRNESRARVKVVDPFPGAMYRVITIYCNVKEKGDADVDDDFHQADPLCPAQDALLKVH 118
Query: 121 DRVI-AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KD 178
+ A GD D + ++LVP+ Q +IGK G ++ +RS+T A I+I KD
Sbjct: 119 AAISNAVAALGDSDKRCRDKKECQILVPTSQSANIIGKAGATIKKLRSKTRANIKITAKD 178
Query: 179 EHLP--SCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSH----- 231
P SCA+ D + I+GE+ VKKAL +++ ++ + + L + + +
Sbjct: 179 ASDPTHSCAMDFDNFLLITGESEAVKKALFAVSAIMYKFSPKEEIPLETTVPEAPPSIII 238
Query: 232 SSSGSLVGP----TAATPIVG---IAPLMGP-----YGGYKGDTAGDWSRSLYSAP---- 275
SS + P A PIV + P++G + GY GD W + P
Sbjct: 239 SSDVPIYQPGGFYPNADPIVSSRSVPPILGATHIPEFQGY-GDMRSSWPIYSSTVPVVPS 297
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ S E +RL+CP IG VIGKGG+ I IRQ SGA I+VD + + D+C+ITV +
Sbjct: 298 FGNTSRSELIIRLLCPFDKIGRVIGKGGSTIKSIRQVSGARIEVDDTKADRDECIITVIA 357
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
E +D S +EA++ LQ + +++ D+ ++ R LVP+ IGC+IGK G+I+ E+
Sbjct: 358 TESPDDLKSMAVEAILLLQGKINDE---DNDIVGI--RFLVPSKVIGCIIGKSGAIVNEI 412
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF-DREGAVS 454
R+ T A++ I + L K A +DE+V+++G++ +DAL+Q++ RLR ++ +++G ++
Sbjct: 413 RKRTNADVCISKVDKL-KCADSNDELVEVAGEVGSVRDALVQIVLRLRDDVLKEKDGGLN 471
Query: 455 TFV 457
+ V
Sbjct: 472 SSV 474
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 158/349 (45%), Gaps = 58/349 (16%)
Query: 8 YGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQ 67
YG S Y+ P + R + II R LCP KIG +IG+GG +K
Sbjct: 278 YGDMRSSWPIYSSTVPVVPSFGNTSRSELII-------RLLCPFDKIGRVIGKGGSTIKS 330
Query: 68 LRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEE 127
+R + ++I + +T +E ++TV A E D S A +A+ + ++
Sbjct: 331 IRQVSGARIEVDDTKADRDECIITVI-------ATESPDDLKSMAVEAILLLQGKI---- 379
Query: 128 LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR 187
DED+D V + LVPS IGC+IGK G IV IR T A + I K + L CA
Sbjct: 380 --NDEDND---IVGIRFLVPSKVIGCIIGKSGAIVNEIRKRTNADVCISKVDKL-KCADS 433
Query: 188 SDELVQISGEASVVKKALCQIASRLHDNPSRSQH--LLASAISNS-HSSSGSLVGPTAAT 244
+DELV+++GE V+ AL QI RL D+ + + L +S ++S + + P+
Sbjct: 434 NDELVEVAGEVGSVRDALVQIVLRLRDDVLKEKDGGLNSSVGTDSVYPVHAGISIPSILP 493
Query: 245 PIVGIAPL------------------------MGPYGGYKGDTAGDWSRS-LYSAPRDDL 279
+ +AP+ P G + +S S LY
Sbjct: 494 SVPPVAPMGYDQRAESGSGLGLFSSSSLYGYGSLPMGENSYGSLASYSLSKLYEG----- 548
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-DSSSTEGD 327
+L ++ P +G VIGKGGA I IR+ SGA I++ D+ S GD
Sbjct: 549 LPPPSTLEMLVPANAVGKVIGKGGANIANIRKISGAMIEISDAKSARGD 597
>gi|449436912|ref|XP_004136236.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
gi|449522219|ref|XP_004168125.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 693
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 172/493 (34%), Positives = 257/493 (52%), Gaps = 56/493 (11%)
Query: 10 KRSHSQTDYADHGPNKRRYTGDDRDQ----FIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
KRS ++ +G K + + R + F + P V+R L P+ +I S++GR G+ +
Sbjct: 9 KRSRDRSSVKSNGKGKWQKSSGSRSRRNQSFKLSPGYAVFRVLFPVSRIDSLVGRDGDGL 68
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSASDET------NAFEDG-------------- 105
++R +T +IR+ +T+PG +ER+ + ++ ET + ED
Sbjct: 69 SKIREETGVEIRVEDTIPGCDERIAVIGGSNQETEVNPEKKSKEDNKNSEVEENDGDIAK 128
Query: 106 -----DKFVSPAQDA-------------LFKVHDRVIAEELRGD-EDSDGGHQVT--AKL 144
DK P +DA LF V +++ EE D D +G T +L
Sbjct: 129 LKKKEDKDSPPVEDAKQKEVTHSQLRKALFLVSEKIFDEEPEADGTDVEGDKLPTFILRL 188
Query: 145 LVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
LV S Q+GC++GKGG +V+ + S++GAQIRIL + LP + ELVQISG VVKKA
Sbjct: 189 LVLSSQVGCLLGKGGSVVKQMSSDSGAQIRILPRDKLPPFVATNVELVQISGGIDVVKKA 248
Query: 205 LCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVG--IAPLMGPYG----- 257
L + +L +NP + +AS+ + S S A G GPY
Sbjct: 249 LELVFQQLIENPPNDKDPVASSNAAQSSRSSGQSLSRAHESPRGSSFNTHGGPYSVPRDV 308
Query: 258 GYKGDTAGDWSRSLYSA---PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
G +A + Y A R S + S RL+CP +G VIGKGGAI+ ++Q++G
Sbjct: 309 GNFHSSAPSLAPKQYEACIPGRSKPSHEILSYRLLCPTERVGNVIGKGGAIVKTLQQDTG 368
Query: 315 AAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRL 374
IKV + + +D +I V+ +D +S +AV R+Q R K DS + R
Sbjct: 369 CDIKVVDGALDSEDRIILVAGPAHPDDRISPVQDAVFRVQARIV-KAAADSKEQNLVARF 427
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
LV +++IGCL+GKGGSII EMR+ T A IRIL KE +PK A ED+E+VQI+G+ + +DA
Sbjct: 428 LVSSNQIGCLLGKGGSIIAEMRKSTGAYIRILGKEQIPKCAGEDEEVVQINGEPETVQDA 487
Query: 435 LIQVMTRLRANLF 447
+ Q+ TRLR + F
Sbjct: 488 MFQITTRLRHHFF 500
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 107/191 (56%), Gaps = 20/191 (10%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
YR LCP ++G++IG+GG IVK L+ DT I++ + SE+R++ V +
Sbjct: 340 YRLLCPTERVGNVIGKGGAIVKTLQQDTGCDIKVVDGALDSEDRIILVAGPAHP------ 393
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
D +SP QDA+F+V R++ E + A+ LV S+QIGC++GKGG I+
Sbjct: 394 -DDRISPVQDAVFRVQARIVKAAADSKE-----QNLVARFLVSSNQIGCLLGKGGSIIAE 447
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLA 224
+R TGA IRIL E +P CA +E+VQI+GE V+ A+ QI +RL H
Sbjct: 448 MRKSTGAYIRILGKEQIPKCAGEDEEVVQINGEPETVQDAMFQITTRLR------HHFFR 501
Query: 225 SAIS--NSHSS 233
A NSHS+
Sbjct: 502 DAFPSVNSHSN 512
>gi|147818880|emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera]
Length = 637
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 173/481 (35%), Positives = 266/481 (55%), Gaps = 56/481 (11%)
Query: 9 GKRSHSQTDY-ADHGPNKRRYTGDDR---DQFIIGPEDTVYRYLCPIRKIGSIIGRGGEI 64
GKR SQ D D+ KRR D D+ I VYR LCP IGS+IG+ G++
Sbjct: 5 GKRFRSQRDQDGDNKIQKRRVNERDEKGSDELI------VYRILCPDGVIGSVIGKSGKV 58
Query: 65 VKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKF-----VSPAQDALFKV 119
+ +R DT++KI++ + PG+++RV+T+Y E E D+F + PAQDAL KV
Sbjct: 59 INSIRQDTRAKIKVVDPFPGAKDRVITIYCYVKEKEEVEVDDEFNDKQPLCPAQDALLKV 118
Query: 120 HDRVI-AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-K 177
H ++ A + D + ++LVPS Q VIGK G ++ +RS+T A I+I K
Sbjct: 119 HAAIVNAVASLENSDKKKKDKEECQILVPSSQSANVIGKAGATIKRLRSKTRANIKITAK 178
Query: 178 DEHLPS--CALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS----- 230
D PS CA+ D V I+G++ VKKAL I++ ++ R + L + + +
Sbjct: 179 DSTDPSHSCAMEFDNFVLIAGDSEAVKKALFAISAIMYKFTPREEIPLDTTVPEAPPSII 238
Query: 231 -------------HSSSGSLVGPTAATPIVGIAPLMGPYGGYK--GDTAGDWSRSL---- 271
+ S+ S+V + P++ A + GY G T +S +L
Sbjct: 239 IPSDVPIYPAGGFYPSADSIVSARSVPPVLA-ATHVPELQGYSDMGSTWPVYSSNLPVVS 297
Query: 272 -YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCL 330
Y A R S+E +R++CP IG VIG+GG+ I +R+ SGA ++VD + + D+CL
Sbjct: 298 GYGASR----SEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECL 353
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGS 390
ITV+S E +D S +EAV+ LQ + ++ E D + RLLVP+ IGC+IGK GS
Sbjct: 354 ITVTSTESVDDLKSMAVEAVLLLQAKIND--EDDD---TVAIRLLVPSKIIGCIIGKSGS 408
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRAN-LFDR 449
II E+R+ T+A++RI K PK A +DE++++ G++ +DAL+Q++ RLR + L DR
Sbjct: 409 IINEIRKRTRADVRI-SKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKDR 467
Query: 450 E 450
+
Sbjct: 468 D 468
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 162/353 (45%), Gaps = 65/353 (18%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+ + R LCP KIG +IGRGG +K +R + + + + +T +E ++TV S
Sbjct: 305 EELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTST----- 359
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D S A +A+ + ++ DED D V +LLVPS IGC+IGK G
Sbjct: 360 --ESVDDLKSMAVEAVLLLQAKI------NDEDDD---TVAIRLLVPSKIIGCIIGKSGS 408
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP--SR 218
I+ IR T A +RI K E P CA +DEL+++ GE V+ AL QI RL D+ R
Sbjct: 409 IINEIRKRTRADVRISKSER-PKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKDR 467
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG-GYKGDTA------------- 264
SA ++S S G+ + ++ P AP + P + +T
Sbjct: 468 DTGHNTSAGTDSLYSGGAGLSVSSVLPS---APPVAPLSYDQRAETGSGLGLLSSSSLYG 524
Query: 265 -----------------GDWSRSLYSAPRDDLSSKEF-------SLRLVCPVANIGGVIG 300
G+ + Y + SSK + + +V P +G V+G
Sbjct: 525 YGSLSLFFAVKVVVVFNGEVGENAYGS-MSSYSSKLYGGLPTPSTFDMVIPANAVGKVMG 583
Query: 301 KGGAIINQIRQESGAAIKV-DSSSTEGDDCLI---TVSSKEFFEDTLSATIEA 349
KGGA I IR+ SGA I++ DS S+ GD + T K E+ + A I A
Sbjct: 584 KGGANIANIRKISGAVIEISDSKSSRGDRVALISGTPEQKRTAENLIQAFIMA 636
>gi|225443912|ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
Length = 623
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 173/481 (35%), Positives = 266/481 (55%), Gaps = 56/481 (11%)
Query: 9 GKRSHSQTDY-ADHGPNKRRYTGDDR---DQFIIGPEDTVYRYLCPIRKIGSIIGRGGEI 64
GKR SQ D D+ KRR D D+ I VYR LCP IGS+IG+ G++
Sbjct: 5 GKRFRSQRDQDGDNKIQKRRVNERDEKGSDELI------VYRILCPDGVIGSVIGKSGKV 58
Query: 65 VKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKF-----VSPAQDALFKV 119
+ +R DT++KI++ + PG+++RV+T+Y E E D+F + PAQDAL KV
Sbjct: 59 INSIRQDTRAKIKVVDPFPGAKDRVITIYCYVKEKEEVEVDDEFNDKQPLCPAQDALLKV 118
Query: 120 HDRVI-AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-K 177
H ++ A + D + ++LVPS Q VIGK G ++ +RS+T A I+I K
Sbjct: 119 HAAIVNAVASLENSDKKKKDKEECQILVPSSQSANVIGKAGATIKRLRSKTRANIKITAK 178
Query: 178 DEHLPS--CALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS----- 230
D PS CA+ D V I+G++ VKKAL I++ ++ R + L + + +
Sbjct: 179 DSTDPSHSCAMEFDNFVLIAGDSEAVKKALFAISAIMYKFTPREEIPLDTTVPEAPPSII 238
Query: 231 -------------HSSSGSLVGPTAATPIVGIAPLMGPYGGYK--GDTAGDWSRSL---- 271
+ S+ S+V + P++ A + GY G T +S +L
Sbjct: 239 IPSDVPIYPAGGFYPSADSIVSARSVPPVLA-ATHVPELQGYSDMGSTWPVYSSNLPVVS 297
Query: 272 -YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCL 330
Y A R S+E +R++CP IG VIG+GG+ I +R+ SGA ++VD + + D+CL
Sbjct: 298 GYGASR----SEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECL 353
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGS 390
ITV+S E +D S +EAV+ LQ + ++ E D + RLLVP+ IGC+IGK GS
Sbjct: 354 ITVTSTESVDDLKSMAVEAVLLLQAKIND--EDDD---TVAIRLLVPSKIIGCIIGKSGS 408
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRAN-LFDR 449
II E+R+ T+A++RI K PK A +DE++++ G++ +DAL+Q++ RLR + L DR
Sbjct: 409 IINEIRKRTRADVRI-SKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKDR 467
Query: 450 E 450
+
Sbjct: 468 D 468
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 153/339 (45%), Gaps = 51/339 (15%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+ + R LCP KIG +IGRGG +K +R + + + + +T +E ++TV S
Sbjct: 305 EELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTST----- 359
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D S A +A+ + ++ DED D V +LLVPS IGC+IGK G
Sbjct: 360 --ESVDDLKSMAVEAVLLLQAKI------NDEDDD---TVAIRLLVPSKIIGCIIGKSGS 408
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
I+ IR T A +RI K E P CA +DEL+++ GE V+ AL QI RL D+ + +
Sbjct: 409 IINEIRKRTRADVRISKSER-PKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKDR 467
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDW------------- 267
N+ + + SL A + + P P D +
Sbjct: 468 D----TGHNTSAGTDSLYSGGAGLSVSSVLPSAPPVAPLSYDQRAETGSGLGLLSSSSLY 523
Query: 268 -------------SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
S S YS+ + +V P +G V+GKGGA I IR+ SG
Sbjct: 524 GYGSLSVGENAYGSMSSYSSKLYGGLPTPSTFDMVIPANAVGKVMGKGGANIANIRKISG 583
Query: 315 AAIKV-DSSSTEGDDCLI---TVSSKEFFEDTLSATIEA 349
A I++ DS S+ GD + T K E+ + A I A
Sbjct: 584 AVIEISDSKSSRGDRVALISGTPEQKRTAENLIQAFIMA 622
>gi|357145086|ref|XP_003573519.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 632
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 172/479 (35%), Positives = 259/479 (54%), Gaps = 53/479 (11%)
Query: 9 GKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQL 68
GKR+ D+ G +++R + E VYR LCP + IGS+IG+ G+++ +
Sbjct: 5 GKRTSQHRDHDREGRDEKRRPAVHTQENSSNDELVVYRILCPDKVIGSVIGKNGKVINSI 64
Query: 69 RIDTKSKIRIGETVPGSEERVVTVY--------SASDETNAFEDGDKFVSPAQDALFKVH 120
R T +K+++ + PG+++RV+ VY + D +D + V AQ+AL KVH
Sbjct: 65 RQQTNAKVKVVDPYPGADKRVILVYCHVHHRDLTHRDIDVDDDDDREPVCAAQNALLKVH 124
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KD- 178
D I E L + DSD A +LVP+ Q VIGK G +++ +RS + + I++ KD
Sbjct: 125 D-AIVEALAINSDSDDEE---ANILVPASQAASVIGKSGSVIKRLRSISKSSIKVRPKDP 180
Query: 179 -EHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS--------QHLLASAI-- 227
E SCA+ D VQI+G+A VKKAL +++ ++ +PS+ Q L S I
Sbjct: 181 SEVTHSCAMSFDNFVQITGDARAVKKALFAVSAIIYKSPSKEIIPLETSVQELPPSIIIP 240
Query: 228 --------SNSHS-SSGSLVGPTAATPIVGIAPLMG--PYGGYKGDTAGDW--------S 268
SN +S S G++ + PI+G + P D G +
Sbjct: 241 SELPVYPASNFYSLSDGAMPSGHPSLPILGAPHHVSRIPEFTVPADAHGRLPIYQSMVPA 300
Query: 269 RSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
YS P+ S + LR+VCP IG VIGKGG I IR+ESGA I VD + + ++
Sbjct: 301 IPTYSTPK---GSGDLLLRVVCPGDKIGLVIGKGGMTIKSIRKESGANIDVDDAKNDREE 357
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKG 388
+ITV+S E +D SA +EAV+ LQ + ++ IE RLLVP + IGCLIGKG
Sbjct: 358 SIITVTSTEATDDVKSAAVEAVLLLQAKINDGIED-----RMHIRLLVPGNVIGCLIGKG 412
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
GSI+ +MR +KA I I K + P+ AS DE+V++ G++D +DAL+Q++ RLR ++
Sbjct: 413 GSIVNDMRNKSKAIIHI-SKGSKPRRASSSDELVEVFGEVDKLRDALVQIVLRLREDVL 470
>gi|297791069|ref|XP_002863419.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297309254|gb|EFH39678.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 643
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 165/459 (35%), Positives = 260/459 (56%), Gaps = 54/459 (11%)
Query: 31 DDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVV 90
D++D ++ VYR LCP +GS+IG+ G+++ +R +T+++I++ + PG ERV+
Sbjct: 36 DNKDDLVV-----VYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVI 90
Query: 91 TVYSASDETNAFEDGD----KFVSP---AQDALFKVHDRVIAEELRGDEDS--DGGHQVT 141
T++ + E D + + P AQDAL KVHD ++A E++ D
Sbjct: 91 TIFCSVTEKKDIIDIEHSELNYSIPLCSAQDALLKVHDAIVASLATAAENTKIDRDDIRE 150
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPS--CALRSDELVQISGEA 198
+LLVPS Q VIGK G I++ IRS T A ++++ KD PS CA+ D +V ISGE+
Sbjct: 151 CRLLVPSSQCSNVIGKSGSIIKKIRSRTRANVKVVSKDVSDPSHTCAMDFDNIVLISGES 210
Query: 199 SVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPT--AATPIVGIAPLMGP- 255
VKKAL +++ ++ R Q L + + S++ P+ + P G+ P P
Sbjct: 211 ESVKKALFAVSAIMYKVSPREQIPLDTTV---QEVPASIIIPSDLSIYPQGGLYPNQDPI 267
Query: 256 --YG------------GYKGDTAGDWSRSLYSAPRDDL--------SSKEFSLRLVCPVA 293
+G GY G++A + ++SA + S++ ++++C +
Sbjct: 268 FQHGANVSSFIGTLPQGY-GESAAN-PMPVFSASALPVVHGFGGSSKSEKLVIKVICSSS 325
Query: 294 NIGGVIGKGGAIINQIRQESGAAIKV-DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR 352
IG VIGKGG+ I IRQ SG+ I+V DS + DDC+ITV++ E +D S +EAV+
Sbjct: 326 KIGRVIGKGGSTIKGIRQASGSHIEVNDSRANHDDDCVITVTATESPDDLKSMAVEAVLL 385
Query: 353 LQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLP 412
LQ + +++ E + +LLVP+ IGC+IGK GSII+E+R+ TKANI I N P
Sbjct: 386 LQEKINDEDEEKVKM-----QLLVPSKVIGCIIGKSGSIISEIRKRTKANIHISKGNNKP 440
Query: 413 KIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF-DRE 450
K A +DE+V+ISG++ +DALIQ++ RLR ++ DRE
Sbjct: 441 KCADPNDELVEISGEVSDVRDALIQIVLRLRDDVLRDRE 479
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 152/318 (47%), Gaps = 47/318 (14%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E V + +C KIG +IG+GG +K +R + S I + ++ ++ V +A+
Sbjct: 314 EKLVIKVICSSSKIGRVIGKGGSTIKGIRQASGSHIEVNDSRANHDDDCVITVTAT---- 369
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D S A +A+ + +++ DED + +V +LLVPS IGC+IGK G
Sbjct: 370 --ESPDDLKSMAVEAVLLLQEKI------NDEDEE---KVKMQLLVPSKVIGCIIGKSGS 418
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP---- 216
I+ IR T A I I K + P CA +DELV+ISGE S V+ AL QI RL D+
Sbjct: 419 IISEIRKRTKANIHISKGNNKPKCADPNDELVEISGEVSDVRDALIQIVLRLRDDVLRDR 478
Query: 217 ---SRSQHLLASAISNSHSSSGSLVG-----------PTAAT------PIVG----IAPL 252
SR+Q S +N SS S G P A+ P G + P
Sbjct: 479 EIGSRNQPPARSENNNFFSSGSSNTGLALPSSFMSSVPQVASVDFDRRPETGSSMSMLPS 538
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSS---KEFSLRLVCPVANIGGVIGKGGAIINQI 309
G GY G+ S S+ +L + ++ + P +G V+G+GG ++ I
Sbjct: 539 SGGLYGYGSFPVGNNSYGSKSSYSSNLYGGLPQSTTMEVRIPANAVGKVMGRGGGNLDNI 598
Query: 310 RQESGAAIKV-DSSSTEG 326
R+ SGA I++ DS ++ G
Sbjct: 599 RRISGAMIEISDSKNSHG 616
>gi|224067136|ref|XP_002302373.1| predicted protein [Populus trichocarpa]
gi|222844099|gb|EEE81646.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 159/485 (32%), Positives = 251/485 (51%), Gaps = 55/485 (11%)
Query: 10 KRSHSQTDYADHGPNKRRYTG---DDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVK 66
KR H +G KR+ T P V+R LCP KIG++ G GG ++
Sbjct: 9 KRLHDSKSTETNGKGKRQNTAGTNSPNQPLKSSPAAVVFRILCPAPKIGTVTGEGGAVIS 68
Query: 67 QLRIDTKSKIRIGETVPGSEERVVTVYSASDET-----NAFEDGD--------------- 106
Q+R +T +K+ + E +PG +E+++ + + ++T + +DGD
Sbjct: 69 QIRQETGAKVIVEENIPGCDEQIIVITGSDEKTEVSIEQSKKDGDEEANVAEESDNKNDG 128
Query: 107 ------------------KFVSPAQDALFKVHDRVIAEELR---GDEDSDGGHQVTAKLL 145
K S Q AL V ++ + GDE+++ +LL
Sbjct: 129 NEKEEEKEGVPVEDSGTVKETSSMQKALLLVSGKMFEADPVTDGGDEENNKPSTFILRLL 188
Query: 146 VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKAL 205
V S Q+GC++GKGG +++ + +E+GAQIRI + LP C+ SDELV+I+GE V+KAL
Sbjct: 189 VLSSQVGCLLGKGGSVIKQMSAESGAQIRISPRDRLPICSSVSDELVEITGEIDAVRKAL 248
Query: 206 CQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAG 265
++ +L +NP R + S + S S P A L +G
Sbjct: 249 QSVSKQLLENPPRDHDSFPANPSGTSSHSSGHSHPRPE------AYLQRHSFSGRGKPYA 302
Query: 266 DWSRSLY-SAPRDDLSSKE--FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
SR + S +D + + RL+C +GGVIGKGG II ++QE+G IKV
Sbjct: 303 VRSRDRHESVIQDQMKPVPDVLTFRLLCHNERVGGVIGKGGTIIKILKQETGCDIKVMEG 362
Query: 323 STEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIG 382
++ +D +I +S +D +SA +AV+R+Q R + I I RLLV +++IG
Sbjct: 363 VSDSEDRVIVISGLAHPDDRISAPQDAVIRVQTRIAMAISNKEKAI--IARLLVSSNQIG 420
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
CL+GKGG+I++EMR+ + A IRIL K+ +P ASE + +VQI+G+ ++ K+AL+Q+ TRL
Sbjct: 421 CLLGKGGAIMSEMRKSSGAYIRILGKDQIPNCASESEGVVQINGEFEVVKEALLQITTRL 480
Query: 443 RANLF 447
R + F
Sbjct: 481 RHHFF 485
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 11/90 (12%)
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG--- 426
T RLL R+G +IGKGG+II +++ T +I+++ ++ +D ++ ISG
Sbjct: 324 LTFRLLCHNERVGGVIGKGGTIIKILKQETGCDIKVMEG-----VSDSEDRVIVISGLAH 378
Query: 427 ---DLDLAKDALIQVMTRLRANLFDREGAV 453
+ +DA+I+V TR+ + ++E A+
Sbjct: 379 PDDRISAPQDAVIRVQTRIAMAISNKEKAI 408
>gi|326517934|dbj|BAK07219.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 632
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 166/482 (34%), Positives = 261/482 (54%), Gaps = 54/482 (11%)
Query: 6 NSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
N GKR+ D+ +++R ++ + E VYR LCP + IGS+IG+GG+++
Sbjct: 2 NPSGKRTGQHRDHDREDRDQKRRPAHTQETSGMA-ELVVYRILCPDKVIGSVIGKGGKVI 60
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSA--------SDETNAFEDGDKFVSPAQDALF 117
+R T +K+++ + PG+++RV+ VY SD +D + V AQ+AL
Sbjct: 61 NSIRQQTNAKVKVVDPYPGADKRVILVYCYVKHRDVMLSDINADDDDDREPVCAAQNALL 120
Query: 118 KVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL- 176
KVHD ++ L +DSD A +LVP+ Q VIGK G +++ +RS + + I++
Sbjct: 121 KVHDAIVGA-LAVTDDSDDKE---ANILVPASQAASVIGKSGSVIKKLRSVSKSFIKVKP 176
Query: 177 KD--EHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAI------- 227
KD + SCA+ D VQI+G+A VKKAL +++ ++ PS+ L ++I
Sbjct: 177 KDPSDVTHSCAMSFDNFVQITGDARAVKKALFAVSTIMYKCPSKENIPLETSIDELPPTI 236
Query: 228 -----------------SNSHSSSG----SLVGPTA-ATPIVGIAPLMGPYGGYKGDTAG 265
S++ SG S++G T+ + + + +GG +
Sbjct: 237 ILPSELPVYPASSLYSVSDASMPSGHPSLSILGATSRGSHVPDFTVPIDTHGGLPIYQSM 296
Query: 266 DWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE 325
+ Y+ P+ S E LR+VCP IG VIGK G I IR+ESGA + VD + +
Sbjct: 297 VPAVPTYNTPK---CSGELLLRVVCPGDKIGLVIGKAGMTIKNIRKESGARVDVDDAKND 353
Query: 326 GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLI 385
++ +ITVSS E +D SA +EAV+ LQ + +++ E L RLLVP + IGCLI
Sbjct: 354 KEESIITVSSTEATDDVKSAAVEAVLLLQAKINDETEDRMHL-----RLLVPGNVIGCLI 408
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRAN 445
GKGGSII +MR +KA I I K P+ AS DE+V++ G++D +DAL+Q++ RLR +
Sbjct: 409 GKGGSIINDMRNKSKAIIHI-SKGTKPRKASSSDELVEVFGEVDKLRDALVQIVLRLRED 467
Query: 446 LF 447
+
Sbjct: 468 VL 469
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 150/319 (47%), Gaps = 55/319 (17%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
+ + R +CP KIG +IG+ G +K +R ++ +++ + + EE ++TV S
Sbjct: 311 ELLLRVVCPGDKIGLVIGKAGMTIKNIRKESGARVDVDDAKNDKEESIITVSST------ 364
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
E D S A +A+ + ++ DE D H +LLVP + IGC+IGKGG I
Sbjct: 365 -EATDDVKSAAVEAVLLLQAKI------NDETEDRMH---LRLLVPGNVIGCLIGKGGSI 414
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
+ ++R+++ A I I K P A SDELV++ GE ++ AL QI RL ++
Sbjct: 415 INDMRNKSKAIIHISKGTK-PRKASSSDELVEVFGEVDKLRDALVQIVLRLRED------ 467
Query: 222 LLASAISNSHS-SSGSLVGPT------AATPIVGIAPLMGPYGGYKGDTAGDWSR----- 269
+L ++ +S G L T ++ P+ + P + D G+ R
Sbjct: 468 VLKDSVGRQNSGKDGKLTVATTEPVSSSSFPMPALLPYSQQITPLRHDQRGEVERGSNVF 527
Query: 270 ---SLYS--APRDDL----------SSKEFSLR-----LVCPVANIGGVIGKGGAIINQI 309
SLY +PR+ + +SK + R + P + + V+GK G ++ I
Sbjct: 528 PRSSLYHGYSPREAVDDGFGVRSSYTSKPYGRRVPDMEMFIPSSGLSKVMGKHGTNLDNI 587
Query: 310 RQESGAAIKVDSSSTEGDD 328
R+ SGA I++ S + D
Sbjct: 588 RKISGADIEILESKSSRHD 606
>gi|449438568|ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 658
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 238/432 (55%), Gaps = 25/432 (5%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSA 95
II P +R LC +IG +IG+ G ++KQL+ T KIR+ E S +RVVTV +
Sbjct: 46 LIIPPGHVAFRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVTVIGS 105
Query: 96 SD-------ETNAFEDGDKF-VSPAQDALFKVHDRV--IAEELRGDEDSDGGHQVTAKLL 145
E N+ G++ S AQ+ L KV +R+ +A E+ G E V +LL
Sbjct: 106 PALTSRVFLEQNSGASGEEVEASKAQEGLLKVFERILEVAAEIEGVEVGAEVGVVYCRLL 165
Query: 146 VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKAL 205
Q+G VIGKGG++V+ IR E+G +IR+L D+ LP+CA SDE+++I G+ +KKAL
Sbjct: 166 ADVAQVGSVIGKGGKVVEKIRKESGCRIRVLTDK-LPACAGPSDEMIEIEGDVWAIKKAL 224
Query: 206 CQIASRLHDNPSRSQHLLASAISNSHSSSGSL-----VGPTAATPIVGIAPLMGPYGGYK 260
++ RL D P + + A + H + L + + PI+ + + G +
Sbjct: 225 LAVSRRLQDCPPSEKRTVRPAEAVIHETLPDLHMDHILQRNSVLPILPSSSNIFASGIHS 284
Query: 261 GDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
D + +++ ++ +++C IGGVIGKGG I+ ++ ESGA + V
Sbjct: 285 LSIDAD----MLPPVDTNVAQQDVVFKILCANDRIGGVIGKGGTIVRALQNESGATVSVG 340
Query: 321 SSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCS----EKIERDSGLIS-FTTRLL 375
S T D+ LI++++ E E S +AVV + R EK + S S RL+
Sbjct: 341 PSVTGCDERLISITASENIESRYSPAQKAVVLVFSRSVDVAIEKWQESSSKGSPVVARLV 400
Query: 376 VPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDAL 435
VP++++GC++GKGG II+E+R++T NIRI+ + +P A+E DE+VQISG+ +DAL
Sbjct: 401 VPSNQVGCVLGKGGVIISEIRKVTGTNIRIISSDQVPNCAAESDEIVQISGEFSNVQDAL 460
Query: 436 IQVMTRLRANLF 447
V RLR NLF
Sbjct: 461 YNVTGRLRDNLF 472
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 133/228 (58%), Gaps = 24/228 (10%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+ +D V++ LC +IG +IG+GG IV+ L+ ++ + + +G +V G +ER++++
Sbjct: 299 VAQQDVVFKILCANDRIGGVIGKGGTIVRALQNESGATVSVGPSVTGCDERLISI----- 353
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEEL-RGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
A E+ + SPAQ A+ V R + + + E S G V A+L+VPS+Q+GCV+G
Sbjct: 354 --TASENIESRYSPAQKAVVLVFSRSVDVAIEKWQESSSKGSPVVARLVVPSNQVGCVLG 411
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KGG I+ IR TG IRI+ + +P+CA SDE+VQISGE S V+ AL + RL DN
Sbjct: 412 KGGVIISEIRKVTGTNIRIISSDQVPNCAAESDEIVQISGEFSNVQDALYNVTGRLRDN- 470
Query: 217 SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTA 264
L +S +SNS + +G G T+ + P PYG + DTA
Sbjct: 471 -----LFSSVLSNSGTRNG---GGTS------VYPETSPYGRVR-DTA 503
>gi|449516663|ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 643
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 238/432 (55%), Gaps = 25/432 (5%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSA 95
II P +R LC +IG +IG+ G ++KQL+ T KIR+ E S +RVVTV +
Sbjct: 51 LIIPPGHVAFRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVTVIGS 110
Query: 96 SD-------ETNAFEDGDKF-VSPAQDALFKVHDRV--IAEELRGDEDSDGGHQVTAKLL 145
E N+ G++ S AQ+ L KV +R+ +A E+ G E V +LL
Sbjct: 111 PALTSRVFLEQNSGASGEEVEASKAQEGLLKVFERILEVAAEIEGVEVGAEVGVVYCRLL 170
Query: 146 VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKAL 205
Q+G VIGKGG++V+ IR E+G +IR+L D+ LP+CA SDE+++I G+ +KKAL
Sbjct: 171 ADVAQVGSVIGKGGKVVEKIRKESGCRIRVLTDK-LPACAGPSDEMIEIEGDVWAIKKAL 229
Query: 206 CQIASRLHDNPSRSQHLLASAISNSHSSSGSL-----VGPTAATPIVGIAPLMGPYGGYK 260
++ RL D P + + A + H + L + + PI+ + + G +
Sbjct: 230 LAVSRRLQDCPPSEKRTVRPAEAVIHETLPDLHMDHILQRNSVLPILPSSSNIFASGIHS 289
Query: 261 GDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
D + +++ ++ +++C IGGVIGKGG I+ ++ ESGA + V
Sbjct: 290 LSIDAD----MLPPVDTNVAQQDVVFKILCANDRIGGVIGKGGTIVRALQNESGATVSVG 345
Query: 321 SSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCS----EKIERDSGLIS-FTTRLL 375
S T D+ LI++++ E E S +AVV + R EK + S S RL+
Sbjct: 346 PSVTGCDERLISITASENIESRYSPAQKAVVLVFSRSVDVAIEKWQESSSKGSPVVARLV 405
Query: 376 VPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDAL 435
VP++++GC++GKGG II+E+R++T NIRI+ + +P A+E DE+VQISG+ +DAL
Sbjct: 406 VPSNQVGCVLGKGGVIISEIRKVTGTNIRIISSDQVPNCAAESDEIVQISGEFSNVQDAL 465
Query: 436 IQVMTRLRANLF 447
V RLR NLF
Sbjct: 466 YNVTGRLRDNLF 477
>gi|449456987|ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
gi|449517605|ref|XP_004165836.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 666
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 153/445 (34%), Positives = 237/445 (53%), Gaps = 50/445 (11%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T YR LC K G +IG+ G I+K +R T + I + E VPG EER++ + SD
Sbjct: 60 TTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEI---SDTRRRD 116
Query: 103 EDGD-KFVSPAQDALFKVHDRVIAEELR--------GDEDSDGGH-------------QV 140
+G SPAQ+ALF +H+R++ E+ G ED + + +V
Sbjct: 117 PEGRMPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGGGGGCGGRV 176
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEAS 199
+L+V +GC++GKGG+I++ +R ET QIRIL +D +LP C S+E+VQI G+ +
Sbjct: 177 ATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDTN 236
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP--------TAATPIVG--I 249
VKKA+ ++SRL + SQH S S + P P+ G
Sbjct: 237 AVKKAIAIVSSRLRE----SQHRDRSHFHGRLHSPERIFPPEDDYVPHNARRLPMDGRPF 292
Query: 250 APLMGPYGGYKGDTAGDWSRSLY---SAPRDD----LSSKEFSLRLVCPVANIGGVIGKG 302
P M D + S + +AP +D ++ +++CP+ + VIG+
Sbjct: 293 RPRMSASNTRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKVDSVIGES 352
Query: 303 GAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIE 362
II +R + G IKV T ++ ++ +SS E +D L EA++ +Q R + +
Sbjct: 353 NGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVP 412
Query: 363 RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
++ TTRLLVP+S IGCL G+ GS++ EM+RLT AN+ I+P+E+LP S DE+V
Sbjct: 413 DKENIV--TTRLLVPSSDIGCLEGRDGSLL-EMKRLTGANVHIVPREDLPMFVSGADELV 469
Query: 423 QISGDLDLAKDALIQVMTRLRANLF 447
QI GD+ A+DAL+++ +RLR L+
Sbjct: 470 QIIGDIKAARDALVELTSRLRNCLY 494
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 97/174 (55%), Gaps = 14/174 (8%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
ED V++ LCPI K+ S+IG I++ LR D I++ + V GS E+++ + S
Sbjct: 332 EDLVFKILCPIEKVDSVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSD----- 386
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D + PAQ+AL + R++ D D + VT +LLVPS IGC+ G+ G
Sbjct: 387 --EGPDDELFPAQEALLHIQTRIV------DLVPDKENIVTTRLLVPSSDIGCLEGRDGS 438
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
+++ ++ TGA + I+ E LP +DELVQI G+ + AL ++ SRL +
Sbjct: 439 LLE-MKRLTGANVHIVPREDLPMFVSGADELVQIIGDIKAARDALVELTSRLRN 491
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 95/203 (46%), Gaps = 33/203 (16%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
S P+D + R++C A GGVIGK G+II IRQ +GA I V ++ +I
Sbjct: 49 SKPQDQSLMVTTTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIE 108
Query: 333 VS-----SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISF----------------- 370
+S E + S EA+ + R E E G
Sbjct: 109 ISDTRRRDPEGRMPSFSPAQEALFLIHERILES-EMSPGFNGMGYGPEDEEDDYGGVRGG 167
Query: 371 ---------TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKE-NLPKIASEDDE 420
TRL+V +GCL+GKGG II +MR TK IRILP++ NLP+ S +E
Sbjct: 168 GGGGCGGRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEE 227
Query: 421 MVQISGDLDLAKDALIQVMTRLR 443
+VQI GD + K A+ V +RLR
Sbjct: 228 IVQIVGDTNAVKKAIAIVSSRLR 250
>gi|225464083|ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 648
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 156/453 (34%), Positives = 245/453 (54%), Gaps = 36/453 (7%)
Query: 18 YADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIR 77
YA +G +KR G +R LC +IG +IG+ G IVKQL+ DT ++IR
Sbjct: 28 YAPNGSSKRSKPPPPPIPVPAG--HVAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIR 85
Query: 78 IGETVPGSEERVVTVYSASDETN--AFEDGDKFV--SPAQDALFKVHDRVIAEELRGDED 133
+ ++ S+ RV+ V + + A + + V S AQ+A+ +V +R++ D
Sbjct: 86 VEDSPSTSDHRVILVIAPASVNRRIALQGSSEEVEASAAQEAVLRVFERILEVAAVVDGV 145
Query: 134 SDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
GG V+ +LL + Q+G VIGKGG++V+ IR E+G++I++L E LP+CA +DE+V+
Sbjct: 146 PPGG-VVSCRLLAETSQVGSVIGKGGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVE 204
Query: 194 ISGEASVVKKALCQIASRLHDNPSR--------------SQHLLASAISNSHSSSGSLVG 239
I G+ VKKAL ++ RL D P+ Q L + GS++
Sbjct: 205 IEGDVLAVKKALVAVSRRLQDCPNVDKTKLIGGRPLEVVPQQSLPDPRVDLFQQRGSVLP 264
Query: 240 PTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
P + I Y + + R P+ S +E +++C +GGVI
Sbjct: 265 PIPSNTIS--------YASGSRPLSINTERISTLDPKT--SQQEVIFKILCSNDRVGGVI 314
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSE 359
GKGG I+ ++ E+GA+I V + E D+ LIT+++ E E S V+ + R E
Sbjct: 315 GKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVILVFNRSIE 374
Query: 360 K-IER--DSGL--ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
IE+ DSG + RL+VP++++GCL+GKGG+II+EMR+ + A IRI+ + +PK
Sbjct: 375 AGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQVPKC 434
Query: 415 ASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
ASE+D++VQISG+ +D L + RLR NLF
Sbjct: 435 ASENDQVVQISGEFVNVQDGLYHITGRLRDNLF 467
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 114/191 (59%), Gaps = 8/191 (4%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ +++ LC ++G +IG+GG IVK L+ + + I +G V +ER++T+
Sbjct: 297 QEVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITI-------T 349
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEEL-RGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
A E+ + SPAQ+ + V +R I + +G + G V+A+L+VPS+Q+GC++GKGG
Sbjct: 350 ASENPESRYSPAQNGVILVFNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGG 409
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
I+ +R +GA IRI+ + +P CA +D++VQISGE V+ L I RL DN S
Sbjct: 410 TIISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPS 469
Query: 220 QHLLASAISNS 230
+ L + I +S
Sbjct: 470 KTLNGAGIRSS 480
>gi|15237393|ref|NP_199431.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|9757739|dbj|BAB08264.1| unnamed protein product [Arabidopsis thaliana]
gi|14532588|gb|AAK64022.1| unknown protein [Arabidopsis thaliana]
gi|21280941|gb|AAM44907.1| unknown protein [Arabidopsis thaliana]
gi|332007968|gb|AED95351.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 644
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 159/457 (34%), Positives = 249/457 (54%), Gaps = 50/457 (10%)
Query: 31 DDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVV 90
D++D ++ VYR LCP +GS+IG+ G+++ +R +T+++I++ + PG ERV+
Sbjct: 37 DNKDDLVV-----VYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVI 91
Query: 91 TVYSASDETNAFEDGD----KFVSP---AQDALFKVHDRVIAEELRGDEDS--DGGHQVT 141
T++ + E D + + P AQ AL KVHD ++A E++ D
Sbjct: 92 TIFCSVSEKKDIVDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRE 151
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPS--CALRSDELVQISGEA 198
+LLVPS Q VIGK G I++NIR T A ++++ KD PS CA+ D +V ISGE
Sbjct: 152 CRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMISGET 211
Query: 199 SVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPT--AATPIVGIAP----- 251
VKKAL +++ ++ R Q L + + S++ P+ + P G+ P
Sbjct: 212 ESVKKALFAVSAIMYKVSPREQIPLDTTV---QEVPASIIIPSDLSIYPQAGLYPSQDSI 268
Query: 252 -------------LMGPYGGYKGDTAGDWSRSLYSAPRD---DLSSKEFSLRLVCPVANI 295
L YG + +S S S++ +++++C + I
Sbjct: 269 FQHGANVSSFIGTLPQGYGENAANPVPVFSASALPVVHGFGGSSRSEKLAIKVICSSSKI 328
Query: 296 GGVIGKGGAIINQIRQESGAAIKV-DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ 354
G VIGKGG I IRQ SG+ I+V DS + DDC+ITV++ E +D S +EAV+ LQ
Sbjct: 329 GRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSMAVEAVLLLQ 388
Query: 355 PRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ +++ E + +LLV + IGC+IGK GSII+E+R+ TKA+I I N PK
Sbjct: 389 EKINDEDEDKVKM-----QLLVSSKVIGCIIGKSGSIISEIRKRTKADIHISKGNNTPKC 443
Query: 415 ASEDDEMVQISGDLDLAKDALIQVMTRLRANLF-DRE 450
A +DE+V+ISG++ +DALIQ++ RLR ++ DRE
Sbjct: 444 ADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDRE 480
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 149/319 (46%), Gaps = 49/319 (15%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E + +C KIG +IG+GG +K +R + S I + ++ ++ V +A+
Sbjct: 315 EKLAIKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTAT---- 370
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D S A +A+ + +++ DED D +V +LLV S IGC+IGK G
Sbjct: 371 --ESPDDLKSMAVEAVLLLQEKI------NDEDED---KVKMQLLVSSKVIGCIIGKSGS 419
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN----- 215
I+ IR T A I I K + P CA +DELV+ISGE S V+ AL QI RL D+
Sbjct: 420 IISEIRKRTKADIHISKGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDR 479
Query: 216 --------PSRSQHLLAS---------AISNSHSSSGSLVG-------PTAATPIVGIAP 251
P+RS++ A+ S SS V P + + + P
Sbjct: 480 ETGSRNQPPARSENNNFFSSSSSNTGLALPQSFMSSVPQVASVDFNRRPETGSSM-SMLP 538
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSS---KEFSLRLVCPVANIGGVIGKGGAIINQ 308
G GY G+ S S+ +L + ++ + P +G V+G+GG ++
Sbjct: 539 SSGGIYGYGSFPVGNTSYGSNSSYSSNLYGGLPQSTTMEVRIPANAVGKVMGRGGGNLDN 598
Query: 309 IRQESGAAIKV-DSSSTEG 326
IR+ SGA I++ DS ++ G
Sbjct: 599 IRRISGAMIEISDSKNSHG 617
>gi|13605589|gb|AAK32788.1|AF361620_1 AT5g46190/MCL19_25 [Arabidopsis thaliana]
Length = 640
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 159/457 (34%), Positives = 249/457 (54%), Gaps = 50/457 (10%)
Query: 31 DDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVV 90
D++D ++ VYR LCP +GS+IG+ G+++ +R +T+++I++ + PG ERV+
Sbjct: 37 DNKDDLVV-----VYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVI 91
Query: 91 TVYSASDETNAFEDGD----KFVSP---AQDALFKVHDRVIAEELRGDEDS--DGGHQVT 141
T++ + E D + + P AQ AL KVHD ++A E++ D
Sbjct: 92 TIFCSVSEKKDIVDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRE 151
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPS--CALRSDELVQISGEA 198
+LLVPS Q VIGK G I++NIR T A ++++ KD PS CA+ D +V ISGE
Sbjct: 152 CRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMISGET 211
Query: 199 SVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPT--AATPIVGIAP----- 251
VKKAL +++ ++ R Q L + + S++ P+ + P G+ P
Sbjct: 212 ESVKKALFAVSAIMYKVSPREQIPLDTTV---QEVPASIIIPSDLSIYPQAGLYPSQDSI 268
Query: 252 -------------LMGPYGGYKGDTAGDWSRSLYSAPRD---DLSSKEFSLRLVCPVANI 295
L YG + +S S S++ +++++C + I
Sbjct: 269 FQHGANVSSFIGTLPQGYGENAANPVPVFSASALPVVHGFGGSSRSEKLAIKVICSSSKI 328
Query: 296 GGVIGKGGAIINQIRQESGAAIKV-DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ 354
G VIGKGG I IRQ SG+ I+V DS + DDC+ITV++ E +D S +EAV+ LQ
Sbjct: 329 GRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSMAVEAVLLLQ 388
Query: 355 PRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ +++ E + +LLV + IGC+IGK GSII+E+R+ TKA+I I N PK
Sbjct: 389 EKINDEDEDKVKM-----QLLVSSKVIGCIIGKSGSIISEIRKRTKADIHISKGNNTPKC 443
Query: 415 ASEDDEMVQISGDLDLAKDALIQVMTRLRANLF-DRE 450
A +DE+V+ISG++ +DALIQ++ RLR ++ DRE
Sbjct: 444 ADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDRE 480
>gi|21553916|gb|AAM62999.1| unknown [Arabidopsis thaliana]
Length = 644
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 159/458 (34%), Positives = 253/458 (55%), Gaps = 52/458 (11%)
Query: 31 DDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVV 90
D++D ++ VYR LCP +GS+IG+ G+++ +R +T+++I++ + PG ERV+
Sbjct: 37 DNKDDLVV-----VYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVI 91
Query: 91 TVYSASDETNAFEDGD----KFVSP---AQDALFKVHDRVIAEELRGDEDS--DGGHQVT 141
T++ + E D + + P AQ AL KVHD ++A E++ D
Sbjct: 92 TIFCSVSEKKDIVDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRE 151
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPS--CALRSDELVQISGEA 198
+LLVPS Q VIGK G I++NIR T A ++++ KD PS CA+ D +V ISGE
Sbjct: 152 CRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDASDPSHTCAMDFDNIVMISGET 211
Query: 199 SVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPT--AATPIVGIAP----- 251
VKKAL +++ ++ R Q L + + S++ P+ + P G+ P
Sbjct: 212 ESVKKALFAVSAIMYKVSPREQIPLDTTV---QEVPASIIIPSDLSIYPQAGLYPSQDSI 268
Query: 252 ---------LMGPYGGYKGDTAGDWSRSLYSAPRDDL--------SSKEFSLRLVCPVAN 294
+G G+ A + ++SA + S++ +++++C +
Sbjct: 269 FQHGANVSSFIGTLPQGYGENAAN-PLPVFSASALPVVHGFGGSSRSEKLAIKVICASSK 327
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV-DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRL 353
IG VIGKGG I IRQ SG+ I+V DS + DDC+ITV++ E +D S +EAV+ L
Sbjct: 328 IGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSMAVEAVLLL 387
Query: 354 QPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPK 413
Q + +++ E + +LLV + IGC+IGK GSII+E+R+ TKA+I I N PK
Sbjct: 388 QEKINDEDEDKVKM-----QLLVSSKVIGCIIGKSGSIISEIRKRTKADIHISKGNNTPK 442
Query: 414 IASEDDEMVQISGDLDLAKDALIQVMTRLRANLF-DRE 450
A +DE+V+ISG++ +DALIQ++ RLR ++ DRE
Sbjct: 443 SADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDRE 480
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 148/319 (46%), Gaps = 49/319 (15%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E + +C KIG +IG+GG +K +R + S I + ++ ++ V +A+
Sbjct: 315 EKLAIKVICASSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTAT---- 370
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D S A +A+ + +++ DED D +V +LLV S IGC+IGK G
Sbjct: 371 --ESPDDLKSMAVEAVLLLQEKI------NDEDED---KVKMQLLVSSKVIGCIIGKSGS 419
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN----- 215
I+ IR T A I I K + P A +DELV+ISGE S V+ AL QI RL D+
Sbjct: 420 IISEIRKRTKADIHISKGNNTPKSADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDR 479
Query: 216 --------PSRSQHLLAS---------AISNSHSSSGSLVG-------PTAATPIVGIAP 251
P+RS++ A+ S SS V P + + + P
Sbjct: 480 ETGSRNQPPARSENNNFFSSSSSNTGLALPQSFMSSVPQVASVDFDRRPETGSSM-SMLP 538
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSS---KEFSLRLVCPVANIGGVIGKGGAIINQ 308
G GY G+ S S+ +L + ++ + P +G V+G+GG ++
Sbjct: 539 SSGGIYGYGSFPVGNTSYGSNSSYSSNLYGGLPQSTTMEVRIPANAVGKVMGRGGGNLDN 598
Query: 309 IRQESGAAIKV-DSSSTEG 326
IR+ SGA I++ DS ++ G
Sbjct: 599 IRRISGAMIEISDSKNSHG 617
>gi|224135123|ref|XP_002321989.1| predicted protein [Populus trichocarpa]
gi|222868985|gb|EEF06116.1| predicted protein [Populus trichocarpa]
Length = 685
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 152/440 (34%), Positives = 243/440 (55%), Gaps = 48/440 (10%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T YR LC K G +IG+ G I+K +R T + I + E +PG EER++ + SD
Sbjct: 86 TSYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI---SDTRRRD 142
Query: 103 EDGD-KFVSPAQDALFKVHDRVIAEELR---------GDEDSD----GGHQVTAKLLVPS 148
+G SPAQ+ALF +HDR++ +L+ G E+ + GG++V +L+V
Sbjct: 143 PEGRMPSFSPAQEALFLIHDRILENDLQYGVVSSGAGGFEEDEYVGRGGNRVATRLVVSR 202
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKDEH-LPSCALRSDELVQISGEASVVKKALCQ 207
+GC++GKGG+I++ +R ET QIRIL +H LP C S+E+VQ+ G+ + VK A+
Sbjct: 203 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHTLPRCVSVSEEIVQVIGDVNAVKNAVAI 262
Query: 208 IASRLHDNPSR------------SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGP 255
I+SRL ++ R + L + + ++ S+ GP P G + L GP
Sbjct: 263 ISSRLRESQHRDRSHFHGRVQSPERFLDDDYVPHMNTRRSSMDGP----PSFG-SRLSGP 317
Query: 256 YGGYKGDT----AGDWSRSLYSAPRDDLSS----KEFSLRLVCPVANIGGVIGKGGAIIN 307
Y+ + A + + P D + ++ R++CP+ + V+G+ +++
Sbjct: 318 --NYRNNNYSSRAPGFPVDAGADPNADSAQPFYVEDLVFRILCPIDKVNRVVGESDGLVD 375
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL 367
++ E G +KV + D+ +IT+ S+E +D L EA++ +Q R + + +
Sbjct: 376 LLQNEIGVDVKVADPVSGSDEQIITICSEEGPDDELFPAQEALLHIQTRIVDLVADKDNI 435
Query: 368 ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD 427
I TTRLLVP+S IGCL G+ GS ++EM LT A I ILPKE LP S DE+VQI G+
Sbjct: 436 I--TTRLLVPSSEIGCLEGRDGS-LSEMESLTGATIEILPKEMLPTYLSGTDELVQIQGE 492
Query: 428 LDLAKDALIQVMTRLRANLF 447
+ A+DAL++V +RLR+ L+
Sbjct: 493 VKAARDALVEVTSRLRSYLY 512
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 126/263 (47%), Gaps = 27/263 (10%)
Query: 4 QRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGE 63
+ N+Y R+ A PN D F + ED V+R LCPI K+ ++G
Sbjct: 320 RNNNYSSRAPGFPVDAGADPN-----ADSAQPFYV--EDLVFRILCPIDKVNRVVGESDG 372
Query: 64 IVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV 123
+V L+ + +++ + V GS+E+++T+ S E D + PAQ+AL + R+
Sbjct: 373 LVDLLQNEIGVDVKVADPVSGSDEQIITICSE-------EGPDDELFPAQEALLHIQTRI 425
Query: 124 IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPS 183
+ +L D+D + +T +LLVPS +IGC+ G+ G + + + S TGA I IL E LP+
Sbjct: 426 V--DLVADKD----NIITTRLLVPSSEIGCLEGRDGSLSE-MESLTGATIEILPKEMLPT 478
Query: 184 CALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAA 243
+DELVQI GE + AL ++ SRL +L + S GP
Sbjct: 479 YLSGTDELVQIQGEVKAARDALVEVTSRLR------SYLYKDVFQKDLPPTVSAPGPAGT 532
Query: 244 TPIVGIAPLMGPYGGYKGDTAGD 266
+ A P +G + GD
Sbjct: 533 AGGLQAASSNNPTPAREGHSGGD 555
>gi|255537898|ref|XP_002510014.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223550715|gb|EEF52201.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 679
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 172/462 (37%), Positives = 253/462 (54%), Gaps = 71/462 (15%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD------ 97
V+R LCP K G IIG+GG I+ Q+R +T +K+R+ ETVPGS+ERVV + + SD
Sbjct: 37 VFRILCPASKTGGIIGKGGAIISQIRQETGAKVRVEETVPGSDERVVIIAAGSDKEMEVN 96
Query: 98 ----------------------------------ETNAFEDGDKFV---SPAQDALFKVH 120
ET + E K V S Q AL V
Sbjct: 97 NAEQNRGDSDDKEPNVGEESNGKQAGSDEDDENKETVSVEHSTKSVRETSSLQKALVLVF 156
Query: 121 DRVIAEELR---GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILK 177
+R++ E G+E+ T +LLV S Q+GC++GKGG +++ + +E+GAQIRIL
Sbjct: 157 ERMLEAEPEMDEGNEEKKKPSMSTLRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILP 216
Query: 178 DEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLA--SAISNSHSSSG 235
+ LP CA +DELVQI+GE ++KAL +A +L +NP + S +SHS
Sbjct: 217 RDKLPICASPTDELVQIAGEVDAIRKALQSVAQQLLENPPKDPEAYPPISTGPSSHSFGH 276
Query: 236 SLVGPTAATPIVGIAPLMGPYGGY--KGDTAGDWSRSLYSA-------PRDDLSSKEFSL 286
L P A P PY + +G T G R + P D+ +
Sbjct: 277 PLPRPEAYPP---------PYHSFNARGTTYGAGPREFHEGGMPGRMRPAPDM----LTF 323
Query: 287 RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSAT 346
RL+C +GGVIGKGGAII ++QE+G IKV ++ +D +I +S +D +SA
Sbjct: 324 RLLCLDEKVGGVIGKGGAIIKTLQQETGCEIKVLEGVSDSEDRIILISGPAHPDDRISAA 383
Query: 347 IEAVVRLQPRCSEKIERDSGL-ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+AV+R+Q R + + G + RLLV +++IGCL+GKGG+I+ EMR+ T A IRI
Sbjct: 384 QDAVLRVQTRIARALPLPEGKEKAVIGRLLVSSNQIGCLLGKGGAIMAEMRKSTGAYIRI 443
Query: 406 LPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
L K+ +PK ASE++E+VQI+G+ ++ ++AL+Q+ TRLR + F
Sbjct: 444 LGKDQIPKCASENEEVVQINGEHEVVQEALLQITTRLRNHFF 485
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 108/177 (61%), Gaps = 10/177 (5%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
P+ +R LC K+G +IG+GG I+K L+ +T +I++ E V SE+R++ + +
Sbjct: 317 APDMLTFRLLCLDEKVGGVIGKGGAIIKTLQQETGCEIKVLEGVSDSEDRIILISGPAHP 376
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
D +S AQDA+ +V R IA L E + V +LLV S+QIGC++GKG
Sbjct: 377 -------DDRISAAQDAVLRVQTR-IARALPLPEGKEKA--VIGRLLVSSNQIGCLLGKG 426
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
G I+ +R TGA IRIL + +P CA ++E+VQI+GE VV++AL QI +RL ++
Sbjct: 427 GAIMAEMRKSTGAYIRILGKDQIPKCASENEEVVQINGEHEVVQEALLQITTRLRNH 483
>gi|356557593|ref|XP_003547100.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 710
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 163/471 (34%), Positives = 251/471 (53%), Gaps = 43/471 (9%)
Query: 18 YADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIR 77
+ +GP+KR + P +R LC +IG +IG+ G ++K L+ T +KIR
Sbjct: 20 FHPNGPSKRSRQSKPPPPLSVPPGHVAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIR 79
Query: 78 IGETVPGSEERVVTVYS-ASDETNAFEDGDKF--VSPAQDALFKVHDRVIAEELRGDEDS 134
I + +R++ V + A+ ++ VS AQ+AL KV DR++ GD
Sbjct: 80 IEDAPQELPDRIILVIADAALSGKILLRNEEVIEVSKAQEALLKVFDRIL-RSGGGDRSV 138
Query: 135 DGGHQV-TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D G +V + +L+ + Q G VIGKGG++V+ I+ ETG +IR+L D+ LP CA SDE+++
Sbjct: 139 DVGDRVMSCRLVADAAQAGSVIGKGGKVVERIKKETGCKIRVLTDD-LPLCASASDEIIE 197
Query: 194 ISGEASVVKKALCQIASRLHD-NPSRSQHLLASA----ISNSHSSSGSLVGPTAATPIVG 248
I G S VKKAL ++ RL D +P ++ S + + TAA +
Sbjct: 198 IEGRVSSVKKALVAVSQRLQDCHPVDRTKMMGSKPYEIVQYEALDALPRATSTAAPRVTL 257
Query: 249 IAPLMGPYGGYKGDTA-----------------GDWSRSLYSAPR--DDLSS-------K 282
A G + +T ++ ++S P + +SS +
Sbjct: 258 TAAPRGTLTAVQHETVDHLLLRSSALSTLSSSSNSYATRIHSLPTEVNRVSSLEPKALKQ 317
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E + R++C +GGVIGKGG I+ ++ E+GA I + + E +D LIT+++ E E
Sbjct: 318 EVTFRILCSNDRVGGVIGKGGNIVRALQSETGATISIGPAVAECEDRLITIAASENPESR 377
Query: 343 LSATIEAVVRLQPRCSE-KIER--DSGLIS---FTTRLLVPTSRIGCLIGKGGSIITEMR 396
S +A V + R E E+ DSGL T RL+VP+S++GCLIGKGG I++EMR
Sbjct: 378 YSPAQKAAVLVFSRSIEVGFEKGLDSGLNKGSIVTVRLVVPSSQVGCLIGKGGVIVSEMR 437
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
+ T ANIRI+ + +PK AS++D++VQISG+ +DAL M RLR NLF
Sbjct: 438 KATGANIRIIGTDQVPKCASDNDQVVQISGEFSSVQDALYNAMGRLRDNLF 488
>gi|255561850|ref|XP_002521934.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538859|gb|EEF40458.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 704
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 154/457 (33%), Positives = 238/457 (52%), Gaps = 55/457 (12%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T YR LC K G +IG+ G I+K +R T + I + E +PG EER++ + SD
Sbjct: 75 TSYRILCHDMKAGGVIGKSGTIIKSIRQHTGAWINVHELIPGDEERIIEI---SDTRRRD 131
Query: 103 EDGD-KFVSPAQDALFKVHDRVIAEE------LRGDEDSDGG-------HQVTAKLLVPS 148
+G SPAQ+ALF +HDR++ + +ED GG ++V +L+V
Sbjct: 132 PEGRMPAFSPAQEALFLIHDRILESDGQFGMSYANEEDEYGGRGINNSNNRVATRLVVSR 191
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKDEH-LPSCALRSDELVQISGEASVVKKALCQ 207
+GC++GKGG+I++ +R ET QIRIL +H LP C S+E+VQ+ G+ + VK A+
Sbjct: 192 MHVGCLLGKGGKIIEQMRIETKTQIRILPRDHTLPRCVSMSEEIVQVVGDVNAVKNAIAI 251
Query: 208 IASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM----------GPYG 257
I+SRL + SQH S N H G + P P P M GP
Sbjct: 252 ISSRLRE----SQHRDRSH-GNFH---GRMHSPERFFPDDDYVPHMNNTGRRSSIDGPSF 303
Query: 258 GYKGDTAGDWSRSLYS-----------APRDD----LSSKEFSLRLVCPVANIGGVIGKG 302
G + + ++ S YS AP D + R++CP + V+G+
Sbjct: 304 GSRA-SGPNYRNSNYSSRQYGYNVEAGAPVADSAQPFYGDDLVFRMLCPADKVNKVVGES 362
Query: 303 GAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIE 362
I++ ++ + G +KV + D+ +I +SS+E +D L EA++ +Q + +
Sbjct: 363 DGILDLLQNDIGVDVKVSDPVSGSDEQMIIISSEEGPDDELFPAQEALLHIQTHIIDLVP 422
Query: 363 RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+I T+L+V + IGCL G+ GS+ +EM RLT A I+ILP+E LP SE DE+V
Sbjct: 423 DSDNIIK--TKLIVSSGEIGCLEGRDGSL-SEMERLTGAKIQILPREKLPACVSEADELV 479
Query: 423 QISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPV 459
QI G++ A+DAL++V +RLR+ L+ T P+
Sbjct: 480 QIEGEIKAARDALVEVTSRLRSYLYKEYFQKDTPPPI 516
>gi|224118310|ref|XP_002317787.1| predicted protein [Populus trichocarpa]
gi|222858460|gb|EEE96007.1| predicted protein [Populus trichocarpa]
Length = 655
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 143/431 (33%), Positives = 233/431 (54%), Gaps = 34/431 (7%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
YR LC K G +IG+ G I+K +R T + I + E +PG EER++ + SD +
Sbjct: 62 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI---SDTRRRDPE 118
Query: 105 GD-KFVSPAQDALFKVHDRVIAEELR---------GDEDSD----GGHQVTAKLLVPSDQ 150
G SPAQ+ALF +HDR++ +L+ G E+ + GG++V +L+V
Sbjct: 119 GRMPSFSPAQEALFLIHDRILENDLQYGVVSSGVGGLEEDEYVGRGGNRVATRLVVSRMH 178
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRILKDEH-LPSCALRSDELVQISGEASVVKKALCQIA 209
+GC++GKGG+I++ +R ET QIRIL +H LP C S+E+VQ+ G+ S VK A+ I+
Sbjct: 179 VGCLLGKGGKIIEQMRMETKTQIRILPRDHTLPRCVSMSEEIVQVVGDVSAVKNAVAIIS 238
Query: 210 SRLHDNPSRSQHLLASAISNS------------HSSSGSLVGPTA-ATPIVGIAPLMGPY 256
SRL ++ R + + + ++ S+ GP + + + G Y
Sbjct: 239 SRLRESQHRDRSHFHGRVHSPERLFDDDYAPHMNTRRSSMDGPPSFGSRVPGSNYRNNNY 298
Query: 257 GGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA 316
A D + ++ R++CP+ + V+G+ I++ ++ E G
Sbjct: 299 SSRASGFAADAGADPIADSAQPFYVEDLVFRILCPIDKLNRVVGESDGIVDLLQNEIGVD 358
Query: 317 IKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLV 376
+KV + D+ +IT+ S+E +D L EA++ +Q R + + + + TTRLLV
Sbjct: 359 VKVADPVSGSDEQIITIFSEEGPDDELFPAQEALLHIQTRIVDLVPDNDHIT--TTRLLV 416
Query: 377 PTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALI 436
+S IGCL G+ S+ +E+ RLT A I ILPKE LP S DE+VQI G++ A+DAL+
Sbjct: 417 RSSEIGCLEGRDASL-SEIERLTGATIEILPKEKLPSYLSGIDEIVQIEGEIRAARDALV 475
Query: 437 QVMTRLRANLF 447
+V +RLR+ ++
Sbjct: 476 EVTSRLRSYIY 486
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 93/172 (54%), Gaps = 14/172 (8%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
ED V+R LCPI K+ ++G IV L+ + +++ + V GS+E+++T++S
Sbjct: 324 EDLVFRILCPIDKLNRVVGESDGIVDLLQNEIGVDVKVADPVSGSDEQIITIFSE----- 378
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D + PAQ+AL + R++ D D H T +LLV S +IGC+ G+
Sbjct: 379 --EGPDDELFPAQEALLHIQTRIV------DLVPDNDHITTTRLLVRSSEIGCLEGRDAS 430
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+ + I TGA I IL E LPS DE+VQI GE + AL ++ SRL
Sbjct: 431 LSE-IERLTGATIEILPKEKLPSYLSGIDEIVQIEGEIRAARDALVEVTSRL 481
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 93/182 (51%), Gaps = 23/182 (12%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS-----SKEFF 339
S R++C GGVIGK G+II IRQ +GA I V ++ +I +S E
Sbjct: 61 SYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 120
Query: 340 EDTLSATIEAVVRLQPRCSEK-------------IERDS----GLISFTTRLLVPTSRIG 382
+ S EA+ + R E +E D G TRL+V +G
Sbjct: 121 MPSFSPAQEALFLIHDRILENDLQYGVVSSGVGGLEEDEYVGRGGNRVATRLVVSRMHVG 180
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKEN-LPKIASEDDEMVQISGDLDLAKDALIQVMTR 441
CL+GKGG II +MR TK IRILP+++ LP+ S +E+VQ+ GD+ K+A+ + +R
Sbjct: 181 CLLGKGGKIIEQMRMETKTQIRILPRDHTLPRCVSMSEEIVQVVGDVSAVKNAVAIISSR 240
Query: 442 LR 443
LR
Sbjct: 241 LR 242
>gi|302143921|emb|CBI23026.3| unnamed protein product [Vitis vinifera]
Length = 575
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 147/432 (34%), Positives = 237/432 (54%), Gaps = 50/432 (11%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T YR LC K G +IG+ G I+K +R T + I + E +PG EER++ + SD
Sbjct: 4 TSYRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI---SDTRRRD 60
Query: 103 EDG--DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
+G +F SPAQ+ALF +HDR++ +SD G ++V +GC++GKGG+
Sbjct: 61 PEGRMPQF-SPAQEALFMIHDRIL--------ESDAG--FGNGMVVSRMHVGCLLGKGGK 109
Query: 161 IVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
I++ +R ET QIRIL +D +LP C S+E+VQ+ G+ + VK A+ I+SRL ++ R
Sbjct: 110 IIEQMRIETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKNAIANISSRLRESQHRD 169
Query: 220 QHLLASAISNS------------HSSS--------GSLVGPTAATPIVGIAPLMGPYGGY 259
+ I +S H ++ G+ G +T +VG +
Sbjct: 170 RSHFHGRIQSSPERFFPPDDDYSHMNNAPRRMPIDGNSFGSRVSTGLVGTR-----SNSF 224
Query: 260 KGDTAGDWSRSLYSAPRDDLSSK----EFSLRLVCPVANIGGVIGKGGAIINQIRQESGA 315
T+G ++ +AP D + + + R++CPV + V+G+ II ++ E G
Sbjct: 225 ASRTSG-YTLESGAAPIADNAQQFLGEDIVFRILCPVDKVECVVGESDGIIELLQNEIGV 283
Query: 316 AIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLL 375
+KV ++ +I ++S+E +D L EA++ +Q R + +I TTRLL
Sbjct: 284 DVKVADHVAGSNEQIIVITSEEGPDDELFPAQEALLHIQTRIVNLLPDKENVI--TTRLL 341
Query: 376 VPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDAL 435
VP+S IGC G+ S+ +EMRRLT ANI+I+P+E LP S DE+++I G++ A+DAL
Sbjct: 342 VPSSEIGCFEGRDCSL-SEMRRLTGANIQIVPREQLPAFISGTDELLEIVGEIKAARDAL 400
Query: 436 IQVMTRLRANLF 447
++V +RLR+ L+
Sbjct: 401 VEVTSRLRSYLY 412
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 113/213 (53%), Gaps = 22/213 (10%)
Query: 1 MAGQR-NSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIG 59
+ G R NS+ R+ T + P D+ QF+ ED V+R LCP+ K+ ++G
Sbjct: 216 LVGTRSNSFASRTSGYTLESGAAP-----IADNAQQFL--GEDIVFRILCPVDKVECVVG 268
Query: 60 RGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKV 119
I++ L+ + +++ + V GS E+++ + S E D + PAQ+AL +
Sbjct: 269 ESDGIIELLQNEIGVDVKVADHVAGSNEQIIVITSE-------EGPDDELFPAQEALLHI 321
Query: 120 HDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
R++ L D++ + +T +LLVPS +IGC G+ + + +R TGA I+I+ E
Sbjct: 322 QTRIV--NLLPDKE----NVITTRLLVPSSEIGCFEGRDCSLSE-MRRLTGANIQIVPRE 374
Query: 180 HLPSCALRSDELVQISGEASVVKKALCQIASRL 212
LP+ +DEL++I GE + AL ++ SRL
Sbjct: 375 QLPAFISGTDELLEIVGEIKAARDALVEVTSRL 407
>gi|357476219|ref|XP_003608395.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355509450|gb|AES90592.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 616
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 153/427 (35%), Positives = 233/427 (54%), Gaps = 35/427 (8%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFE 103
V+R LC +IG+ IG+ G ++K L+ T ++IRI + ERV+ V N
Sbjct: 21 VFRLLCHASRIGAFIGKSGSVIKSLQQLTGARIRIDDAPVDCPERVIVVI-----VNLNG 75
Query: 104 DGDKFVSPAQDALFKVHDRVI-AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIV 162
DGD ++P Q+AL KV +R++ D + G V+ +LLV + Q G VIGKGG +V
Sbjct: 76 DGDVSLNP-QEALLKVFERILDVAAAESDGNGVGDRVVSCRLLVNAGQAGGVIGKGGMVV 134
Query: 163 QNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
IR++TG +IR+L D+ LP+C SDE+++I G AS VKKAL +A RL D P +
Sbjct: 135 AKIRADTGCRIRVLNDK-LPACTKPSDEIIEIQGIASSVKKALVAVAGRLQDCPPLDRTK 193
Query: 223 LASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD--------TAGDWSRSLYSA 274
+ + T+A P G+ L + + + G S+S +
Sbjct: 194 MMGT-----RPYEAFQNETSAVPHEGLTDLNMDFRLQRSSAISTSSIRSNGVPSKSHPLS 248
Query: 275 PRDDLSS--------KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
D+ S +E + R++C IG V+GKGG+I+ ++ E+GA I V E
Sbjct: 249 VEDNRVSSLDPEALKQEVTFRILCSGDRIGAVLGKGGSIVKALQNETGANISVGPPVVEC 308
Query: 327 DDCLITVSSKEFFEDTLSATIEAVVRLQPR----CSEKI--ERDSGLISFTTRLLVPTSR 380
+D LIT+++ E E S EAVV + R C EK+ R + S T +L+VP+++
Sbjct: 309 EDRLITITALENPESRFSPAQEAVVLVFCRSIECCIEKVVDWRSNKESSVTAQLVVPSNQ 368
Query: 381 IGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMT 440
+G L+GKGG+I++EMR+ T +IRI +PK AS +D++VQISG+L +DAL
Sbjct: 369 VGVLLGKGGAIVSEMRKATWTSIRITRNGEVPKCASFNDQVVQISGELPNVRDALYNATR 428
Query: 441 RLRANLF 447
RLR ++F
Sbjct: 429 RLRDHIF 435
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 104/177 (58%), Gaps = 9/177 (5%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ +R LC +IG+++G+GG IVK L+ +T + I +G V E+R++T+
Sbjct: 264 QEVTFRILCSGDRIGAVLGKGGSIVKALQNETGANISVGPPVVECEDRLITI-------T 316
Query: 101 AFEDGDKFVSPAQDALFKVHDRVI--AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
A E+ + SPAQ+A+ V R I E D S+ VTA+L+VPS+Q+G ++GKG
Sbjct: 317 ALENPESRFSPAQEAVVLVFCRSIECCIEKVVDWRSNKESSVTAQLVVPSNQVGVLLGKG 376
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
G IV +R T IRI ++ +P CA +D++VQISGE V+ AL RL D+
Sbjct: 377 GAIVSEMRKATWTSIRITRNGEVPKCASFNDQVVQISGELPNVRDALYNATRRLRDH 433
>gi|225455340|ref|XP_002272224.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 661
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 147/443 (33%), Positives = 235/443 (53%), Gaps = 49/443 (11%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T YR LC K G +IG+ G I+K +R T + I + E +PG EER++ + SD
Sbjct: 67 TSYRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI---SDTRRRD 123
Query: 103 EDG--DKFVSPAQDALFKVHDRVIAEE-------------LRGDEDSDGGHQVTAKLLVP 147
+G +F SPAQ+ALF +HDR++ + GG++V +++V
Sbjct: 124 PEGRMPQF-SPAQEALFMIHDRILESDAGFGNGFGGNGDDDDDFGPRGGGNRVATRMVVS 182
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALC 206
+GC++GKGG+I++ +R ET QIRIL +D +LP C S+E+VQ+ G+ + VK A+
Sbjct: 183 RMHVGCLLGKGGKIIEQMRIETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKNAIA 242
Query: 207 QIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGG-------- 258
I+SRL ++ R + I SS P + AP P G
Sbjct: 243 NISSRLRESQHRDRSHFHGRI---QSSPERFFPPDDDYSHMNNAPRRMPIDGNSFGSRVS 299
Query: 259 ----------YKGDTAGDWSRSLYSAPRDDLSSK----EFSLRLVCPVANIGGVIGKGGA 304
+ T+G ++ +AP D + + + R++CPV + V+G+
Sbjct: 300 TGLVGTRSNSFASRTSG-YTLESGAAPIADNAQQFLGEDIVFRILCPVDKVECVVGESDG 358
Query: 305 IINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERD 364
II ++ E G +KV ++ +I ++S+E +D L EA++ +Q R +
Sbjct: 359 IIELLQNEIGVDVKVADHVAGSNEQIIVITSEEGPDDELFPAQEALLHIQTRIVNLLPDK 418
Query: 365 SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQI 424
+I TTRLLVP+S IGC G+ S+ +EMRRLT ANI+I+P+E LP S DE+++I
Sbjct: 419 ENVI--TTRLLVPSSEIGCFEGRDCSL-SEMRRLTGANIQIVPREQLPAFISGTDELLEI 475
Query: 425 SGDLDLAKDALIQVMTRLRANLF 447
G++ A+DAL++V +RLR+ L+
Sbjct: 476 VGEIKAARDALVEVTSRLRSYLY 498
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 113/213 (53%), Gaps = 22/213 (10%)
Query: 1 MAGQR-NSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIG 59
+ G R NS+ R+ T + P D+ QF+ ED V+R LCP+ K+ ++G
Sbjct: 302 LVGTRSNSFASRTSGYTLESGAAP-----IADNAQQFL--GEDIVFRILCPVDKVECVVG 354
Query: 60 RGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKV 119
I++ L+ + +++ + V GS E+++ + S E D + PAQ+AL +
Sbjct: 355 ESDGIIELLQNEIGVDVKVADHVAGSNEQIIVITSE-------EGPDDELFPAQEALLHI 407
Query: 120 HDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
R++ L D++ + +T +LLVPS +IGC G+ + + +R TGA I+I+ E
Sbjct: 408 QTRIV--NLLPDKE----NVITTRLLVPSSEIGCFEGRDCSLSE-MRRLTGANIQIVPRE 460
Query: 180 HLPSCALRSDELVQISGEASVVKKALCQIASRL 212
LP+ +DEL++I GE + AL ++ SRL
Sbjct: 461 QLPAFISGTDELLEIVGEIKAARDALVEVTSRL 493
>gi|356519471|ref|XP_003528396.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 591
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 149/423 (35%), Positives = 236/423 (55%), Gaps = 29/423 (6%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LC ++G+IIG+ G ++K L+ T +KIRI + P S +RV+ V + + A D
Sbjct: 27 FRLLCHASRVGAIIGKSGVLIKTLQEATGAKIRIEDAPPDSPDRVILVSAPA----AASD 82
Query: 105 GDKFVSPAQDALFKVHDRV--IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIV 162
G+ VS AQ AL KV DRV +A E G E D V+ +LL + Q+G VIGK G++V
Sbjct: 83 GE--VSTAQVALLKVFDRVLDVAAETAGTEVGD--RVVSCRLLADTSQVGAVIGKAGKVV 138
Query: 163 QNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
+ IR +TG +IR+L +E LP+C SDE+V++ G+ + VKKAL ++ L D P +
Sbjct: 139 EKIRMDTGCKIRVL-NEGLPACTAPSDEIVEVEGQLTSVKKALVAVSGCLQDCPPPDRTK 197
Query: 223 LASAISNSHSSSGSLVGPTAATPIVGI-------APLMGPYGGYKGDTAGDWSRSL---- 271
+ + S + P + + I + L G+ +G S
Sbjct: 198 MTGSRHYEVVRSETCSVPLESLTNLHIDRRLQRSSTLSTLSNRSNGNASGAPKLSAEVNR 257
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
SA +E + R++C +G VIGKGG+I+ ++ ESGA I S E +D L+
Sbjct: 258 VSALDPKALQQEVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISFGPSLVECEDRLV 317
Query: 332 TVS-SKEFFEDTLSATIEAVVRLQPRCSEK-IERDSGLIS-----FTTRLLVPTSRIGCL 384
T++ S++ E S +AVV + + E +E+ + S T +L+VP++++GCL
Sbjct: 318 TITASEQNPESRYSPAQKAVVLVFSKSVEAGVEKGLDMGSKKESYVTAQLVVPSNQVGCL 377
Query: 385 IGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRA 444
+GKGG+I++EMR+ T ANIR++ + +PK S++D++VQISG+ + A+ RLR
Sbjct: 378 LGKGGAIVSEMRKATGANIRVIGNDKVPKCVSDNDQLVQISGEFSNVQAAIYNATGRLRD 437
Query: 445 NLF 447
NLF
Sbjct: 438 NLF 440
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 153/295 (51%), Gaps = 24/295 (8%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ +R +C ++G++IG+GG IV+ L+ ++ + I G ++ E+R+VT+ T
Sbjct: 268 QEVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISFGPSLVECEDRLVTI------TA 321
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRG--DEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
+ ++ + SPAQ A+ V + + + D S VTA+L+VPS+Q+GC++GKG
Sbjct: 322 SEQNPESRYSPAQKAVVLVFSKSVEAGVEKGLDMGSKKESYVTAQLVVPSNQVGCLLGKG 381
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G IV +R TGA IR++ ++ +P C +D+LVQISGE S V+ A+ RL DN
Sbjct: 382 GAIVSEMRKATGANIRVIGNDKVPKCVSDNDQLVQISGEFSNVQAAIYNATGRLRDNLFV 441
Query: 219 SQHLLASAISNSHSSSG--------------SLVGPTAATPIVGIAPLMGPYGGYKGDTA 264
S A S S SG SL G A + GI + G +G T+
Sbjct: 442 STQNSGGARSLSSVLSGGKPTVAVSLSLNRHSLPGLQAPQTVAGINSRV-TNGVSRGLTS 500
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
L S + + + ++++ P IG V G+ G+ + ++RQ SGA + V
Sbjct: 501 QKGGLELVSGSKTAIVTNT-TVQIAVPDDVIGSVYGENGSNLARLRQISGAKVIV 554
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 86/163 (52%), Gaps = 6/163 (3%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
+ + RL+C + +G +IGK G +I +++ +GA I+++ + + D +I VS+
Sbjct: 22 TTHVTFRLLCHASRVGAIIGKSGVLIKTLQEATGAKIRIEDAPPDSPDRVILVSAPAAAS 81
Query: 341 DTLSATIEAVV-----RLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
D +T + + R+ +E + G + RLL TS++G +IGK G ++ ++
Sbjct: 82 DGEVSTAQVALLKVFDRVLDVAAETAGTEVGDRVVSCRLLADTSQVGAVIGKAGKVVEKI 141
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
R T IR+L E LP + DE+V++ G L K AL+ V
Sbjct: 142 RMDTGCKIRVL-NEGLPACTAPSDEIVEVEGQLTSVKKALVAV 183
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 75/188 (39%), Gaps = 67/188 (35%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS--- 195
VT +LL + ++G +IGK G +++ ++ TGA+IRI E P + D ++ +S
Sbjct: 24 HVTFRLLCHASRVGAIIGKSGVLIKTLQEATGAKIRI---EDAPPDS--PDRVILVSAPA 78
Query: 196 ----GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
GE S + AL ++ R+ D
Sbjct: 79 AASDGEVSTAQVALLKVFDRVLD------------------------------------- 101
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+TAG ++ + S RL+ + +G VIGK G ++ +IR
Sbjct: 102 -------VAAETAG-----------TEVGDRVVSCRLLADTSQVGAVIGKAGKVVEKIRM 143
Query: 312 ESGAAIKV 319
++G I+V
Sbjct: 144 DTGCKIRV 151
>gi|15236863|ref|NP_193572.1| KH domain-containing protein [Arabidopsis thaliana]
gi|15214341|sp|P58223.1|Y4837_ARATH RecName: Full=KH domain-containing protein At4g18375
gi|22136632|gb|AAM91635.1| unknown protein [Arabidopsis thaliana]
gi|332658636|gb|AEE84036.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 606
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 161/489 (32%), Positives = 261/489 (53%), Gaps = 59/489 (12%)
Query: 10 KRSHSQTDYADHGPNKRRYTGDD---RDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVK 66
KR Q + ++ N++R D RD+ + VYR LCPI +G +IG+ G+++
Sbjct: 6 KRKQIQRNNSESNRNQKRRISHDKINRDELV------VYRILCPIDVVGGVIGKSGKVIN 59
Query: 67 QLRIDTKSKIRIGETVPGSEERVVTVYSA----SDETNAFEDGDKFVSPAQDALFKVHDR 122
+R +TK+KI++ + + G +RV+T+Y + +E + ++ + AQDAL KV+D
Sbjct: 60 AIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPLCCAQDALLKVYDA 119
Query: 123 VIA--EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KDE 179
++A EE + D +LLVP Q +IGK G+ ++ IR T A ++++ KD
Sbjct: 120 IVASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDV 179
Query: 180 HLPS--CALRSDELVQISGEASVVKKALCQIASRLHD-NP-------SRSQHLLASAI-- 227
PS CA+ D +V ISGE VK+AL +++ ++ NP S SQ + A+++
Sbjct: 180 SDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPAASVIV 239
Query: 228 ----SNS-------HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
SNS +S+ ++ A P A + + GY A S P
Sbjct: 240 PSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLPV 299
Query: 277 D-----DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE-GDD-C 329
S+E +++CP+ NI VIGKGG+ I +IR+ SG+ I+V+ S T+ GDD C
Sbjct: 300 THGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDEC 359
Query: 330 LITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGG 389
+I V++ E +D S +EAV+ LQ E I D + +LLV + IGC+IGK G
Sbjct: 360 VIIVTATESPDDMKSMAVEAVLLLQ----EYIN-DEDAENVKMQLLVSSKVIGCVIGKSG 414
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
S+I E+R+ T ANI I + D++V++SG++ +DALIQ++ RLR ++
Sbjct: 415 SVINEIRKRTNANICIS--------KGKKDDLVEVSGEVSSVRDALIQIVLRLREDVLGD 466
Query: 450 EGAVSTFVP 458
+ +V+T P
Sbjct: 467 KDSVATRKP 475
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 158/339 (46%), Gaps = 68/339 (20%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE--TVPGSEERVVTVYSASDE 98
E+ V++ LCP+ I +IG+GG +K++R + S I + + T G +E V+ V
Sbjct: 310 EELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIV------ 363
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
A E D S A +A+ + +E DED++ V +LLV S IGCVIGK
Sbjct: 364 -TATESPDDMKSMAVEAVL------LLQEYINDEDAE---NVKMQLLVSSKVIGCVIGKS 413
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN--- 215
G ++ IR T A I I K + D+LV++SGE S V+ AL QI RL ++
Sbjct: 414 GSVINEIRKRTNANICISKG--------KKDDLVEVSGEVSSVRDALIQIVLRLREDVLG 465
Query: 216 ----------PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAG 265
P+R+ + S S S G T + + +A G + GY AG
Sbjct: 466 DKDSVATRKPPARTDNC-------SFLSGSSNAGYTLPSFMSSMASTSG-FHGYGSFPAG 517
Query: 266 D---WSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
D S YS R SS +L ++ P + V+GKGG + IR+ SGA I++ +S
Sbjct: 518 DNVLGSTGPYSYGRLPSSS---ALEILIPAHAMSKVMGKGGGNLENIRRISGAMIEISAS 574
Query: 323 STEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI 361
T D + LS T+E Q RC+E +
Sbjct: 575 KTSHGDHIA----------LLSGTLE-----QMRCAENL 598
>gi|30684386|ref|NP_849406.1| KH domain-containing protein [Arabidopsis thaliana]
gi|24762211|gb|AAN64172.1| putative KH domain protein [Arabidopsis thaliana]
gi|332658635|gb|AEE84035.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 532
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 161/489 (32%), Positives = 261/489 (53%), Gaps = 59/489 (12%)
Query: 10 KRSHSQTDYADHGPNKRRYTGDD---RDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVK 66
KR Q + ++ N++R D RD+ + VYR LCPI +G +IG+ G+++
Sbjct: 6 KRKQIQRNNSESNRNQKRRISHDKINRDELV------VYRILCPIDVVGGVIGKSGKVIN 59
Query: 67 QLRIDTKSKIRIGETVPGSEERVVTVYSA----SDETNAFEDGDKFVSPAQDALFKVHDR 122
+R +TK+KI++ + + G +RV+T+Y + +E + ++ + AQDAL KV+D
Sbjct: 60 AIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPLCCAQDALLKVYDA 119
Query: 123 VIA--EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KDE 179
++A EE + D +LLVP Q +IGK G+ ++ IR T A ++++ KD
Sbjct: 120 IVASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDV 179
Query: 180 HLPS--CALRSDELVQISGEASVVKKALCQIASRLHD-NP-------SRSQHLLASAI-- 227
PS CA+ D +V ISGE VK+AL +++ ++ NP S SQ + A+++
Sbjct: 180 SDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPAASVIV 239
Query: 228 ----SNS-------HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
SNS +S+ ++ A P A + + GY A S P
Sbjct: 240 PSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLPV 299
Query: 277 D-----DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE-GDD-C 329
S+E +++CP+ NI VIGKGG+ I +IR+ SG+ I+V+ S T+ GDD C
Sbjct: 300 THGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDEC 359
Query: 330 LITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGG 389
+I V++ E +D S +EAV+ LQ E I D + +LLV + IGC+IGK G
Sbjct: 360 VIIVTATESPDDMKSMAVEAVLLLQ----EYIN-DEDAENVKMQLLVSSKVIGCVIGKSG 414
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
S+I E+R+ T ANI I + D++V++SG++ +DALIQ++ RLR ++
Sbjct: 415 SVINEIRKRTNANICIS--------KGKKDDLVEVSGEVSSVRDALIQIVLRLREDVLGD 466
Query: 450 EGAVSTFVP 458
+ +V+T P
Sbjct: 467 KDSVATRKP 475
>gi|297804330|ref|XP_002870049.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297315885|gb|EFH46308.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 605
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 163/493 (33%), Positives = 263/493 (53%), Gaps = 67/493 (13%)
Query: 10 KRSHSQTDYADHGPNKRRYTGDD-----RDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEI 64
KR +Q + + N++R ++ RD+ +I YR LCPI +G +IG+ G++
Sbjct: 6 KRKQNQRNNNESNRNQKRRISNNGEKINRDELVI------YRILCPIDVVGGVIGKSGKV 59
Query: 65 VKQLRIDTKSKIRIGETVPGSEERVVTVYSA-----SDETNAFEDGDKFVSPAQDALFKV 119
+ +R +TK+KI++ + + G +RV+T+Y + +E + + + + AQDAL KV
Sbjct: 60 INAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKKEEEIDFMKSETEPLCCAQDALLKV 119
Query: 120 HDRVIA---EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
+D ++A E ++ D D + LLVPS Q +IGK G+ ++ IRS T A ++++
Sbjct: 120 YDAIVASDEENIKIDRDD----KKECLLLVPSSQSFSLIGKAGENIKRIRSTTRASVKVV 175
Query: 177 -KDEHLPS--CALRSDELVQISGEASVVKKALCQIASRLHD-NP-------SRSQHLLAS 225
KD PS CA+ D +V ISGE VKKAL +++ L+ NP S Q + AS
Sbjct: 176 SKDVSDPSHVCAMDYDNIVVISGEPESVKKALFAVSAILYKINPREHIPLDSTGQDVPAS 235
Query: 226 AI-----SNS-------HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
I SNS +S+ ++ A P A + + GY A S
Sbjct: 236 IIVSSDLSNSVYPQTGFYSNQDHILQQRAGVPSYFNALSVSNFQGYAETAANPMPVFASS 295
Query: 274 APRD-----DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE-GD 327
P SKE L+++CP++NI VIGKGG+ I +IR+ SG+ I+V+ S T+ GD
Sbjct: 296 LPVTHGFGGSSRSKELVLKVLCPLSNITRVIGKGGSTIKRIRETSGSCIEVNDSRTKCGD 355
Query: 328 D-CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIG 386
D C+I V++ E +D S +EAV+ LQ E I D +L V + IGC+IG
Sbjct: 356 DECVIIVTATESPDDMKSMAVEAVLLLQ----EYIN-DEDAEKVKMQLFVSSKDIGCVIG 410
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
K GS+I E+R+ T ANI I + D++V+++G++ ++A+IQ++ RLR ++
Sbjct: 411 KSGSVINEIRKRTNANICIS--------KGKKDDLVEVAGEISSVRNAIIQIVLRLREDV 462
Query: 447 F-DREGAVSTFVP 458
DR+ ++ P
Sbjct: 463 LGDRDSVAASRKP 475
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 158/334 (47%), Gaps = 58/334 (17%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE--TVPGSEERVVTVYSASDE 98
++ V + LCP+ I +IG+GG +K++R + S I + + T G +E V+ V
Sbjct: 309 KELVLKVLCPLSNITRVIGKGGSTIKRIRETSGSCIEVNDSRTKCGDDECVIIV------ 362
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
A E D S A +A+ + +E DED++ +V +L V S IGCVIGK
Sbjct: 363 -TATESPDDMKSMAVEAVL------LLQEYINDEDAE---KVKMQLFVSSKDIGCVIGKS 412
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH----- 213
G ++ IR T A I I K + D+LV+++GE S V+ A+ QI RL
Sbjct: 413 GSVINEIRKRTNANICISKG--------KKDDLVEVAGEISSVRNAIIQIVLRLREDVLG 464
Query: 214 --DNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGD---WS 268
D+ + S+ A + S S S G T P + + GY AGD S
Sbjct: 465 DRDSVAASRKPPARTDNYSLFSGSSNAGYT--LPSFMSSASSSGFHGYGSFPAGDNVFGS 522
Query: 269 RSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-DSSSTEGD 327
S YS R SS +L ++ P + V+GKGG + IR+ SGA I++ DS +++GD
Sbjct: 523 VSPYSFGRLPSSS---ALEILIPANAMSKVMGKGGGNLENIRRISGAMIEISDSKTSQGD 579
Query: 328 DCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI 361
+ LS T+E Q RC+E +
Sbjct: 580 HIAL-----------LSGTLE-----QMRCAENL 597
>gi|297847528|ref|XP_002891645.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297337487|gb|EFH67904.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 622
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 144/453 (31%), Positives = 230/453 (50%), Gaps = 77/453 (16%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVP-GSEERVVTVYSAS--- 96
E +R LCP + G+IIG+GG +++ L+ T SKIR+ + +P SEERVV + + S
Sbjct: 17 ESVHFRLLCPAARTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKK 76
Query: 97 -DETNAFE-----------------------DGDKFVSPAQDALFKVHDRVI----AEEL 128
D++N F+ D ++ S AQ AL +V +R++ A +
Sbjct: 77 KDDSNVFDSENPSSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVLERIVFGDDAASV 136
Query: 129 RGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRS 188
GD G + +++V +Q+ ++ KGG+++Q IR ++GA +RI + +P CA
Sbjct: 137 DGDGLDKGESESLCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISSTDQIPPCAFPG 196
Query: 189 DELVQ--ISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPI 246
D ++Q I+G+ S VKKAL I + L + + A P
Sbjct: 197 DVVIQMKITGKFSSVKKALLLITNCLQE--------------------------SGAPPT 230
Query: 247 VGIAPLMGPYGGYKGDTAG-----DWSRSLYSAPRD------DLSSKEFSLRLVCPVANI 295
P P GY D W P D + +E S RL+CP +
Sbjct: 231 WDECPF--PQPGYPPDYHSMEYHPQWDHPPNPMPEDVVPFNRPVVEEEVSFRLLCPADKV 288
Query: 296 GGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQP 355
G +IGKGGA++ ++ ESGA+IKV + + ++ +I +S++E E S + V+R+
Sbjct: 289 GSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERRHSLAQDGVMRVHN 348
Query: 356 RCSE-KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
R E E + +++ RLLV + IG L+GKGG +I+EMRR T A+IR+ K+ K
Sbjct: 349 RIVEIGFEPSAAVVA---RLLVHSPYIGRLLGKGGHLISEMRRATGASIRVFAKDQATKY 405
Query: 415 ASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
S+ DE+VQ+ G+L +DAL Q++ RLR +F
Sbjct: 406 ESQHDEIVQVIGNLKTVQDALFQILCRLREAMF 438
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 54/224 (24%)
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-------------------- 319
+++ RL+CP A G +IGKGG++I ++ +G+ I+V
Sbjct: 15 AAESVHFRLLCPAARTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSG 74
Query: 320 ------------DSSSTE-----GDDCLITVSSKEFFEDTLSATIEAVVRLQPRC----- 357
+ SS E G +C T + E+ S+ A++R+ R
Sbjct: 75 KKKDDSNVFDSENPSSEEPKQEKGSECAGTSGGDD--EEAPSSAQMALLRVLERIVFGDD 132
Query: 358 SEKIE---RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ ++ D G R++V +++ L+ KGG +I +R + A +RI + +P
Sbjct: 133 AASVDGDGLDKGESESLCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISSTDQIPPC 192
Query: 415 ASEDDEMVQ--ISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
A D ++Q I+G K AL+ L N GA T+
Sbjct: 193 AFPGDVVIQMKITGKFSSVKKALL-----LITNCLQESGAPPTW 231
>gi|255563372|ref|XP_002522689.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538165|gb|EEF39776.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 698
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 150/438 (34%), Positives = 231/438 (52%), Gaps = 47/438 (10%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+ P +R LC +IG IIG+ G I+KQL+ + +KIRI E+ S +RV+TV +
Sbjct: 51 LPPGHVSFRLLCHASRIGGIIGKSGTIIKQLQQQSGAKIRIEESPAESSDRVITVIAEGQ 110
Query: 98 ETNAF--EDGDKFVSPAQDALFKVHDRV--IAEELRG-DEDSDGGHQVTAKLLVPSDQIG 152
+ E + VS AQ+ L +V +R+ +A E G + + GG V+ ++L S Q G
Sbjct: 111 IVSKVRVESEEVDVSRAQEGLIRVFERILEVAAESDGINVVAGGGGVVSCRMLAGSKQAG 170
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
VIGKGG++V+ IR + G +IR+L D+ LP CA ++E+++I G+ VKKAL ++ L
Sbjct: 171 SVIGKGGKVVEKIRKDCGVKIRVLTDK-LPVCAGPNEEMIEIEGDILSVKKALIAVSRCL 229
Query: 213 HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLY 272
D + S P+ + + P T + + S
Sbjct: 230 QD---------CQPVDKPRVGSSKYFEAVPQEPLPEMRVEIAPQRNIMVPTMQNNAVSCA 280
Query: 273 SAPRD-------------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
P + L +E +++CP +GGVIGKGG II ++ E+GA+I +
Sbjct: 281 PVPHNFLLETDRVPSLDMKLFQQEVVFKILCPNDMVGGVIGKGGTIIKALQNETGASITI 340
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTS 379
++ E D+ LITV + E E SA +AVV + +RL+VP++
Sbjct: 341 GATIAESDERLITVIASENPESRYSAAQKAVVLV-----------------FSRLVVPSN 383
Query: 380 RIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVM 439
++GCL+GKGG II++MR+ T +I+IL + LPK E++++VQISGD KDA+ V
Sbjct: 384 QVGCLLGKGGIIISDMRKTTGTSIKILAGDQLPKCVPENEQVVQISGDFMNVKDAVYHVT 443
Query: 440 TRLRANLFDREGAVSTFV 457
RLR NLF A+ST V
Sbjct: 444 GRLRDNLFS--SALSTPV 459
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 113/205 (55%), Gaps = 36/205 (17%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ V++ LCP +G +IG+GG I+K L+ +T + I IG T+ S+ER++TV
Sbjct: 303 QEVVFKILCPNDMVGGVIGKGGTIIKALQNETGASITIGATIAESDERLITVI------- 355
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A E+ + S AQ A+ V R L+VPS+Q+GC++GKGG
Sbjct: 356 ASENPESRYSAAQKAVVLVFSR---------------------LVVPSNQVGCLLGKGGI 394
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
I+ ++R TG I+IL + LP C ++++VQISG+ VK A+ + RL DN
Sbjct: 395 IISDMRKTTGTSIKILAGDQLPKCVPENEQVVQISGDFMNVKDAVYHVTGRLRDN----- 449
Query: 221 HLLASAISNSHSSSGSLVGPTAATP 245
L +SA+S + S +++ T A+P
Sbjct: 450 -LFSSALSTPVTRSTTVI--TEASP 471
>gi|15217969|ref|NP_175569.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|12321677|gb|AAG50879.1|AC025294_17 hypothetical protein [Arabidopsis thaliana]
gi|12325367|gb|AAG52626.1|AC024261_13 hypothetical protein; 15135-12645 [Arabidopsis thaliana]
gi|31711718|gb|AAP68215.1| At1g51580 [Arabidopsis thaliana]
gi|110735740|dbj|BAE99849.1| hypothetical protein [Arabidopsis thaliana]
gi|332194564|gb|AEE32685.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 621
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 140/452 (30%), Positives = 231/452 (51%), Gaps = 76/452 (16%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVP-GSEERVVTVYSAS--- 96
E +R LCP + G+IIG+GG +++ L+ T SKIR+ + +P SEERVV + + S
Sbjct: 17 ESVHFRLLCPATRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKK 76
Query: 97 -DETNAFE-----------------------DGDKFVSPAQDALFKVHDRVI----AEEL 128
DE+N + D ++ S AQ AL +V +R++ A +
Sbjct: 77 KDESNVCDSENPGSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVFERIVFGDDAATV 136
Query: 129 RGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRS 188
GDE G + +++V +Q+ ++ KGG+++Q IR ++GA +RI + +P CA
Sbjct: 137 DGDELDKGESEGLCRMIVRGNQVDYLMSKGGKMIQKIREDSGAIVRISSTDQIPPCAFPG 196
Query: 189 DELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVG 248
D ++Q++G+ S VKKAL + + L + + A P
Sbjct: 197 DVVIQMNGKFSSVKKALLLVTNCLQE--------------------------SGAPPTWD 230
Query: 249 IAPLMGPYGGYKGDTAG-----DWSRSLYSAPRDDLSS-------KEFSLRLVCPVANIG 296
P P GY + W + +D+ +E + RL+CP +G
Sbjct: 231 ECPF--PQPGYPPEYHSMEYHPQWDHPPPNPMPEDVGPFNRPVVEEEVAFRLLCPADKVG 288
Query: 297 GVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPR 356
+IGKGGA++ ++ ESGA+IKV + + ++ +I +S++E E S + V+R+ R
Sbjct: 289 SLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERRHSLAQDGVMRVHNR 348
Query: 357 CSE-KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIA 415
E E + +++ RLLV + IG L+GKGG +I+EMRR T A+IR+ K+ K
Sbjct: 349 IVEIGFEPSAAVVA---RLLVHSPYIGRLLGKGGHLISEMRRATGASIRVFAKDQATKYE 405
Query: 416 SEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
S+ DE+VQ+ G+L +DAL Q++ RLR +F
Sbjct: 406 SQHDEIVQVIGNLKTVQDALFQILCRLREAMF 437
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 90/222 (40%), Gaps = 52/222 (23%)
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-------------------- 319
+++ RL+CP G +IGKGG++I ++ +G+ I+V
Sbjct: 15 AAESVHFRLLCPATRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSG 74
Query: 320 -----------------DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPR------ 356
+ +G +C T + E+ S+ A++R+ R
Sbjct: 75 KKKDESNVCDSENPGSEEPKQEKGSECAGTSGGDD--EEAPSSAQMALLRVFERIVFGDD 132
Query: 357 --CSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ E D G R++V +++ L+ KGG +I ++R + A +RI + +P
Sbjct: 133 AATVDGDELDKGESEGLCRMIVRGNQVDYLMSKGGKMIQKIREDSGAIVRISSTDQIPPC 192
Query: 415 ASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
A D ++Q++G K AL+ L N GA T+
Sbjct: 193 AFPGDVVIQMNGKFSSVKKALL-----LVTNCLQESGAPPTW 229
>gi|356516077|ref|XP_003526723.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 647
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 144/437 (32%), Positives = 236/437 (54%), Gaps = 42/437 (9%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T YR LC K G +IG+ G I+K +R T + I + E +PG EER++ + SD
Sbjct: 61 TSYRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDEERIIEI---SDTRRRD 117
Query: 103 EDGD-KFVSPAQDALFKVHDRVIAEE-----LRGDED-------SDGGHQVTAKLLVPSD 149
+G SPAQ+AL +H+R++ + DE+ G +V +L+V
Sbjct: 118 PEGRMPSFSPAQEALLLIHERILESDAAFGVAEDDEEYGAGRGGGAGRDRVATRLVVSRM 177
Query: 150 QIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQI 208
+GC++GKGG+I++ +R ET QIRIL +D +LP C S+E+VQ+ G+ + VK AL I
Sbjct: 178 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKNALVII 237
Query: 209 ASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGI----APLMGPYGGYKGDTA 264
+SRL ++ R + + HS P V + + G G +G
Sbjct: 238 SSRLRESQHRDRSHFHGRV---HSPERFFSPDDDYVPHVTSGSRRSSVDGASFGSRGSNT 294
Query: 265 G---------DWSRSLYSAPRDD----LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
++ +AP D +E R++CPV + +IG+ I+ ++
Sbjct: 295 NSRNNNHPSLSYAMEPGAAPVVDDAQGFYGEELVFRILCPVEKVDLIIGESDGIVEFLQS 354
Query: 312 ESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI-ERDSGLISF 370
E G +KV D+ +I ++S+E +D L EA++ +Q R + + ++D+ +
Sbjct: 355 EVGVDVKVTDPVGGSDEQIIIITSEEGPDDELFPAQEALLHIQTRIVDLVLDKDN---TI 411
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
TTRL+VP+S I CL GK S ++E+RRLT ANI+ILP+++LP ++ DE+VQI G++
Sbjct: 412 TTRLVVPSSEIECLDGKDVS-LSEIRRLTGANIQILPRDDLPLCVAKTDELVQIVGEIKA 470
Query: 431 AKDALIQVMTRLRANLF 447
A+DA+++V +RLR+ L+
Sbjct: 471 ARDAVVEVTSRLRSYLY 487
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 149/299 (49%), Gaps = 36/299 (12%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+ V+R LCP+ K+ IIG IV+ L+ + +++ + V GS+E+++ + S
Sbjct: 325 EELVFRILCPVEKVDLIIGESDGIVEFLQSEVGVDVKVTDPVGGSDEQIIIITSE----- 379
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D + PAQ+AL + R++ +L D+D+ +T +L+VPS +I C+ GK
Sbjct: 380 --EGPDDELFPAQEALLHIQTRIV--DLVLDKDN----TITTRLVVPSSEIECLDGKDVS 431
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL-----HDN 215
+ + IR TGA I+IL + LP C ++DELVQI GE + A+ ++ SRL D
Sbjct: 432 LSE-IRRLTGANIQILPRDDLPLCVAKTDELVQIVGEIKAARDAVVEVTSRLRSYLYRDF 490
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATP-----IVGIAPLMGPYGGYKGDTAGDWSRS 270
R L + + + +SS + + P A T + +A + P G ++ + +
Sbjct: 491 FQRDPIPLPAPLPGAEASSSNNIVPVAETSTTYQNVQTVAAALPP--KETGGSSTEVGKQ 548
Query: 271 LYSAPRDDLSS----------KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S RDD+ S +L +V P + +I K + + QI + SGA + +
Sbjct: 549 KESGRRDDVLSGLNRIAVPLVTRSTLEVVIPEYAVPKLIAKSKSKLAQISELSGANVTL 607
>gi|8809595|dbj|BAA97146.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 660
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/428 (33%), Positives = 236/428 (55%), Gaps = 33/428 (7%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T YR LC K G +IG+ G I+K +R T + I + E VPG ER++ + SD
Sbjct: 68 TTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEI---SDNRRRD 124
Query: 103 EDGD-KFVSPAQDALFKVHDRVIAEELR-------GDEDSD------GGHQVTAKLLVPS 148
DG SPAQ+ALF VHDR++ E + +E+ D GG +V +L+V
Sbjct: 125 PDGRMPSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRPGGGRVVTRLVVSR 184
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQ 207
+GC++GKGG+I++ +R ET IRIL ++ +LP C S+E+VQI GE + VK AL
Sbjct: 185 MHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVGELNAVKNALAI 244
Query: 208 IASRLHDNPSRSQHLLASAIS-NSHSSSGSLV--GPTAATPIVGIAPLMGPYGGYKGDT- 263
++SRL + SQH S SHS S G + + P G ++ +
Sbjct: 245 VSSRLRE----SQHRDRSNFQGRSHSPERSFAAAGDDYMPQLRRQSSDRFPRGNFRNNNF 300
Query: 264 ---AGDWSRSLYSAPR-DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+++ + P +++ S+E +++CP I V+G+ II+ ++ E G ++V
Sbjct: 301 SSRQSNYAEEAPAVPVGENVYSEELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRV 360
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTS 379
D+ +IT+SS+E +D EA++ +Q + + I LI TTRLLVP+
Sbjct: 361 SDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQIIDLIPDKDNLI--TTRLLVPSR 418
Query: 380 RIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVM 439
CL GK GS+ +E+ RLT +++IL +E +P+ AS +D ++QI+G++ A++AL+++
Sbjct: 419 DSICLEGKAGSV-SEISRLTGTSVQILAREEIPRCASINDVVIQITGEIRAAREALVELT 477
Query: 440 TRLRANLF 447
LR+++F
Sbjct: 478 LLLRSHMF 485
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 114/235 (48%), Gaps = 29/235 (12%)
Query: 6 NSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
N++ R Q++YA+ P G++ + E+ V++ LCP KI ++G I+
Sbjct: 298 NNFSSR---QSNYAEEAPAVP--VGEN-----VYSEELVFQILCPADKIVRVVGESQGII 347
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIA 125
L+ + +R+ + V GS+E+++T+ S E D PAQ+AL + ++I
Sbjct: 348 DLLQNEIGVDVRVSDPVAGSDEQIITISSE-------EAPDDPFFPAQEALLHIQTQII- 399
Query: 126 EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
D D + +T +LLVPS C+ GK G V I TG ++IL E +P CA
Sbjct: 400 -----DLIPDKDNLITTRLLVPSRDSICLEGKAGS-VSEISRLTGTSVQILAREEIPRCA 453
Query: 186 LRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
+D ++QI+GE ++AL ++ L RS + + +S S GP
Sbjct: 454 SINDVVIQITGEIRAAREALVELTLLL-----RSHMFKELSQKETPPASTSTTGP 503
>gi|30696273|ref|NP_200118.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|17065220|gb|AAL32764.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|30725478|gb|AAP37761.1| At5g53060 [Arabidopsis thaliana]
gi|332008915|gb|AED96298.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 652
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/428 (33%), Positives = 236/428 (55%), Gaps = 33/428 (7%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T YR LC K G +IG+ G I+K +R T + I + E VPG ER++ + SD
Sbjct: 68 TTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEI---SDNRRRD 124
Query: 103 EDGD-KFVSPAQDALFKVHDRVIAEELR-------GDEDSD------GGHQVTAKLLVPS 148
DG SPAQ+ALF VHDR++ E + +E+ D GG +V +L+V
Sbjct: 125 PDGRMPSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRPGGGRVVTRLVVSR 184
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQ 207
+GC++GKGG+I++ +R ET IRIL ++ +LP C S+E+VQI GE + VK AL
Sbjct: 185 MHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVGELNAVKNALAI 244
Query: 208 IASRLHDNPSRSQHLLASAIS-NSHSSSGSLV--GPTAATPIVGIAPLMGPYGGYKGDT- 263
++SRL + SQH S SHS S G + + P G ++ +
Sbjct: 245 VSSRLRE----SQHRDRSNFQGRSHSPERSFAAAGDDYMPQLRRQSSDRFPRGNFRNNNF 300
Query: 264 ---AGDWSRSLYSAPR-DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+++ + P +++ S+E +++CP I V+G+ II+ ++ E G ++V
Sbjct: 301 SSRQSNYAEEAPAVPVGENVYSEELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRV 360
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTS 379
D+ +IT+SS+E +D EA++ +Q + + I LI TTRLLVP+
Sbjct: 361 SDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQIIDLIPDKDNLI--TTRLLVPSR 418
Query: 380 RIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVM 439
CL GK GS+ +E+ RLT +++IL +E +P+ AS +D ++QI+G++ A++AL+++
Sbjct: 419 DSICLEGKAGSV-SEISRLTGTSVQILAREEIPRCASINDVVIQITGEIRAAREALVELT 477
Query: 440 TRLRANLF 447
LR+++F
Sbjct: 478 LLLRSHMF 485
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 120/248 (48%), Gaps = 34/248 (13%)
Query: 6 NSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
N++ R Q++YA+ P G++ + E+ V++ LCP KI ++G I+
Sbjct: 298 NNFSSR---QSNYAEEAPAV--PVGEN-----VYSEELVFQILCPADKIVRVVGESQGII 347
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIA 125
L+ + +R+ + V GS+E+++T+ S E D PAQ+AL + ++I
Sbjct: 348 DLLQNEIGVDVRVSDPVAGSDEQIITISSE-------EAPDDPFFPAQEALLHIQTQII- 399
Query: 126 EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
D D + +T +LLVPS C+ GK G V I TG ++IL E +P CA
Sbjct: 400 -----DLIPDKDNLITTRLLVPSRDSICLEGKAGS-VSEISRLTGTSVQILAREEIPRCA 453
Query: 186 LRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATP 245
+D ++QI+GE ++AL ++ L RS + + +S S G P
Sbjct: 454 SINDVVIQITGEIRAAREALVELTLLL-----RSHMFKELSQKETPPASTSTTG-----P 503
Query: 246 IVGIAPLM 253
+ G+A +M
Sbjct: 504 LEGVAGVM 511
>gi|297792661|ref|XP_002864215.1| hypothetical protein ARALYDRAFT_495374 [Arabidopsis lyrata subsp.
lyrata]
gi|297310050|gb|EFH40474.1| hypothetical protein ARALYDRAFT_495374 [Arabidopsis lyrata subsp.
lyrata]
Length = 652
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 145/427 (33%), Positives = 234/427 (54%), Gaps = 32/427 (7%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T YR LC K G +IG+ G I+K +R T + I + E VPG ER++ + SD
Sbjct: 69 TTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDVERIIEI---SDNRRRD 125
Query: 103 EDGD-KFVSPAQDALFKVHDRVIAEE-------LRGDEDSD------GGHQVTAKLLVPS 148
DG SPAQ+ALF VHDR++ E + +E+ D GG +V +L+V
Sbjct: 126 PDGRMPSFSPAQEALFNVHDRILESEPQFGYGGAQPEEEEDYGGVRPGGGRVVTRLVVSR 185
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQ 207
+GC++GKGG+I++ +R ET IRIL ++ +LP C S+E+VQI GE S VK AL
Sbjct: 186 MHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVGELSAVKNALLI 245
Query: 208 IASRLHDNPSRSQHLLASAIS-NSHSSSGSLVGP-TAATPIVGIAPLMGPYGGYKGDT-- 263
++SRL + SQH S SHS P + P G Y+ +
Sbjct: 246 VSSRLRE----SQHRDRSNFQGRSHSPERQFAAAGDDYIPQRRQSSDRFPRGNYRNNNFS 301
Query: 264 --AGDWSRSLYSAPR-DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
+++ + P +++ ++E +++CP I V+G+ I++ ++ E G ++V
Sbjct: 302 SRQSNYAEEAPAVPVGENVYTEELVFQILCPADKIVRVVGESQGILDLLQNEIGVDVRVS 361
Query: 321 SSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSR 380
T D+ +IT+SS+E +D EA++ +Q + + + LI TTRLLV +
Sbjct: 362 DPVTGSDEQIITISSEEAPDDPFFPAQEALLHIQTQIIDLLPDKDNLI--TTRLLVSSRD 419
Query: 381 IGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMT 440
CL GK GS+ +E+ RLT +++IL +E +P+ AS +D ++QI+GD+ A+DAL+++
Sbjct: 420 SVCLEGKAGSV-SEISRLTGTSVQILAREEIPRCASINDVVIQITGDIRAARDALVELTL 478
Query: 441 RLRANLF 447
LR+++F
Sbjct: 479 LLRSHMF 485
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 120/252 (47%), Gaps = 42/252 (16%)
Query: 6 NSYGKRSHSQTDYADHGP----NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRG 61
N++ R Q++YA+ P + YT E+ V++ LCP KI ++G
Sbjct: 298 NNFSSR---QSNYAEEAPAVPVGENVYT-----------EELVFQILCPADKIVRVVGES 343
Query: 62 GEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHD 121
I+ L+ + +R+ + V GS+E+++T+ S E D PAQ+AL +
Sbjct: 344 QGILDLLQNEIGVDVRVSDPVTGSDEQIITISSE-------EAPDDPFFPAQEALLHIQT 396
Query: 122 RVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL 181
++I +L D+D + +T +LLV S C+ GK G V I TG ++IL E +
Sbjct: 397 QII--DLLPDKD----NLITTRLLVSSRDSVCLEGKAGS-VSEISRLTGTSVQILAREEI 449
Query: 182 PSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPT 241
P CA +D ++QI+G+ + AL ++ L RS + + +S S G
Sbjct: 450 PRCASINDVVIQITGDIRAARDALVELTLLL-----RSHMFKELSQKETPPASTSTTG-- 502
Query: 242 AATPIVGIAPLM 253
P+ G+A +M
Sbjct: 503 ---PLEGVAGVM 511
>gi|145347410|ref|XP_001418160.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578389|gb|ABO96453.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 651
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 153/471 (32%), Positives = 233/471 (49%), Gaps = 70/471 (14%)
Query: 11 RSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRI 70
RS + +HG N G+ RD + YR LCP +IG +IG+ G ++K R
Sbjct: 37 RSGERRHRGEHGSN-----GEFRDASV------RYRLLCPTTRIGRVIGKEGRVIKATRA 85
Query: 71 DTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEE--- 127
+T +++++ T G++ERV+ V S D T EDG+ + A+ ALF++ D + EE
Sbjct: 86 ETGARVKVAPTTRGADERVILVASGDDLTVG-EDGEGMTT-AEVALFRIFDTITGEEGVT 143
Query: 128 -----------LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
+ G +LLVP Q+G +IGKGG ++ IR+ +GA +R++
Sbjct: 144 AARGGEGEGEGEASGGSTRGASTPICRLLVPRVQVGSLIGKGGTVISAIRASSGATVRVM 203
Query: 177 KDEHLPSCALRSDELVQISGEA--------------SVVKKALCQIASRLHDNPSRSQHL 222
LP+CA + DEL+QI+ + + VK AL IA L + PS++
Sbjct: 204 PANMLPACASQGDELLQITAPSRDADGAERDQKLSMASVKNALRMIAKHLREYPSKN--- 260
Query: 223 LASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSS- 281
A+ SN ++G A P+ G + A + + + R +L+
Sbjct: 261 -AATESNRSPFEAFMIGNKTA-----------PHAGVESPGAKNGG---HMSTRMNLNGV 305
Query: 282 -----KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
E + RL+CPV+ G VIG+ G +I QIR ++GA +KV ++ +I VSS
Sbjct: 306 YVPGGTEITFRLLCPVSKTGSVIGRNGEVIQQIRSQTGAKVKVCEQVNGAEERIICVSSS 365
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
+ D L+ + A V L +E I RLLV TS+IGCLIGKGGSII ++R
Sbjct: 366 D---DGLAPMLAAQVALFRVYRCIVESAGNEIPLPFRLLVQTSQIGCLIGKGGSIIKQIR 422
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQI-SGDLDLAKDALIQVMTRLRANL 446
T A +R+LP E LP A+ DDE+++I D + V RLR N+
Sbjct: 423 NETGATVRVLPSEALPSCAN-DDELLEIGQWPADACALGIRIVSGRLRGNI 472
>gi|356509231|ref|XP_003523354.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 644
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 140/434 (32%), Positives = 232/434 (53%), Gaps = 39/434 (8%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T YR LC K G +IG+ G I+K +R T + I + E +PG EER++ + SD
Sbjct: 61 TSYRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDEERIIEI---SDTRRRD 117
Query: 103 EDGD-KFVSPAQDALFKVHDRVIAEE---------LRGDEDSDGGHQVTAKLLVPSDQIG 152
+G SPAQ+AL +H+R++ + G ++ +L+V +G
Sbjct: 118 PEGRMPSFSPAQEALLLIHERILESDAAFGVAEEDEEYGGRGGGRDRIATRLVVSRMHVG 177
Query: 153 CVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIASR 211
C++GKGG+I++ +R ET QIRIL +D +LP C S+E+VQ+ G + VK AL I+SR
Sbjct: 178 CLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVVGNVNAVKNALVIISSR 237
Query: 212 LHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGI----APLMGPYGGYKGDTAG-- 265
L ++ R + + HS P V + + G G +G
Sbjct: 238 LRESQHRDRSHFHGRV---HSPERFFSPDDDYVPHVTSGSRRSSVDGASFGSRGSNTNSR 294
Query: 266 -------DWSRSLYSAPRDD----LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
+++ +AP D +E R++CP+ + +IG+ I+ ++ E G
Sbjct: 295 NNNHPSLNYAMEPGAAPVVDDAQGFYGEELVFRILCPIEKVDRIIGESEGIVEFLQNEVG 354
Query: 315 AAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI-ERDSGLISFTTR 373
+KV D+ +I ++S+E +D L EA++ +Q R + + ++D+ + TTR
Sbjct: 355 VDVKVTDPVGGSDEQIIIITSEEGPDDELFPAQEALLHVQTRIVDLVLDKDN---TITTR 411
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
L+VP+S I CL GK S ++E+RRLT ANI+ILP++ LP ++ DE+VQI G++ A+D
Sbjct: 412 LVVPSSEIECLDGKDVS-LSEIRRLTGANIQILPRDELPLCVAKTDELVQIVGEIKAARD 470
Query: 434 ALIQVMTRLRANLF 447
A+++V +RLR+ L+
Sbjct: 471 AVVEVTSRLRSYLY 484
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 146/301 (48%), Gaps = 40/301 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+ V+R LCPI K+ IIG IV+ L+ + +++ + V GS+E+++ + S
Sbjct: 322 EELVFRILCPIEKVDRIIGESEGIVEFLQNEVGVDVKVTDPVGGSDEQIIIITSE----- 376
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D + PAQ+AL V R++ +L D+D + +T +L+VPS +I C+ GK
Sbjct: 377 --EGPDDELFPAQEALLHVQTRIV--DLVLDKD----NTITTRLVVPSSEIECLDGKDVS 428
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL-----HDN 215
+ + IR TGA I+IL + LP C ++DELVQI GE + A+ ++ SRL D
Sbjct: 429 LSE-IRRLTGANIQILPRDELPLCVAKTDELVQIVGEIKAARDAVVEVTSRLRSYLYRDF 487
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATP-------IVGIAPLMGPYGGYKGDTAGDWS 268
R L + + + +SS + + P TP V A GG +T
Sbjct: 488 FQRDTVPLPAPLPGAAASSSNNIVPVTETPTTYQNLQTVAAALPSKETGGSSTETG---- 543
Query: 269 RSLYSAPRDDLSS----------KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIK 318
+ S RDDL S +L +V P + ++ K + + QI + SGA +
Sbjct: 544 KQKESDRRDDLLSGLNRIAVPLVTRSTLEVVLPEYAVPKLVAKSKSKLAQISELSGANVT 603
Query: 319 V 319
+
Sbjct: 604 L 604
>gi|7486302|pir||T04533 hypothetical protein F28J12.30 - Arabidopsis thaliana
gi|2832642|emb|CAA16717.1| putative protein [Arabidopsis thaliana]
gi|7268630|emb|CAB78839.1| putative protein [Arabidopsis thaliana]
Length = 846
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 158/503 (31%), Positives = 262/503 (52%), Gaps = 73/503 (14%)
Query: 10 KRSHSQTDYADHGPNKRRYTGDD---RDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVK 66
KR Q + ++ N++R D RD+ + VYR LCPI +G +IG+ G+++
Sbjct: 314 KRKQIQRNNSESNRNQKRRISHDKINRDELV------VYRILCPIDVVGGVIGKSGKVIN 367
Query: 67 QLRIDTKSKIRIGETVPGSEERVVTVYSA----SDETNAFEDGDKFVSPAQDALFKVHDR 122
+R +TK+KI++ + + G +RV+T+Y + +E + ++ + AQDAL KV+D
Sbjct: 368 AIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPLCCAQDALLKVYDA 427
Query: 123 VIA--EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KDE 179
++A EE + D +LLVP Q +IGK G+ ++ IR T A ++++ KD
Sbjct: 428 IVASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDV 487
Query: 180 HLPS--CALRSDELVQISGEASVVKKALCQIASRLHD-NP-------SRSQHLLASAI-- 227
PS CA+ D +V ISGE VK+AL +++ ++ NP S SQ + A+++
Sbjct: 488 SDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPAASVIV 547
Query: 228 ----SNS-------HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
SNS +S+ ++ A P A + + GY A S P
Sbjct: 548 PSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLPV 607
Query: 277 D-----DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE-GDD-C 329
S+E +++CP+ NI VIGKGG+ I +IR+ SG+ I+V+ S T+ GDD C
Sbjct: 608 THGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDEC 667
Query: 330 LITVSSKEFF--------------EDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLL 375
+I V++ E +D S +EAV+ LQ +++ + + +LL
Sbjct: 668 VIIVTATEILFCCLSTPFVFMQSPDDMKSMAVEAVLLLQEYINDEDAENVKM-----QLL 722
Query: 376 VPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDAL 435
V + IGC+IGK GS+I E+R+ T ANI I + D++V++SG++ +DAL
Sbjct: 723 VSSKVIGCVIGKSGSVINEIRKRTNANICIS--------KGKKDDLVEVSGEVSSVRDAL 774
Query: 436 IQVMTRLRANLFDREGAVSTFVP 458
IQ++ RLR ++ + +V+T P
Sbjct: 775 IQIVLRLREDVLGDKDSVATRKP 797
>gi|357159179|ref|XP_003578365.1| PREDICTED: poly(rC)-binding protein 2-like [Brachypodium
distachyon]
Length = 629
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 123/347 (35%), Positives = 196/347 (56%), Gaps = 29/347 (8%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQ------VTAKLLVPSDQIGCVIGKGGQIVQNI 165
A A +V +RV+ + GD+ +G + V ++L Q+GCV+GKGG+ V+ +
Sbjct: 78 APAAAVRVWERVVGHRVGGDDAGEGEEEKEVTGVVGCRMLAAGGQVGCVLGKGGKTVERM 137
Query: 166 RSETGAQIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLA 224
R E+GAQIR+ ++ + +P CAL+ DEL+ ISG S +KAL +++ L DNP
Sbjct: 138 RQESGAQIRVFRNKDQVPPCALQGDELIHISGSFSAARKALLLVSTCLQDNPR------- 190
Query: 225 SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSLYSA------PR 276
+ S+ S+G GP + VG P + + Y D+ +S+ PR
Sbjct: 191 --LETSNFSTGRSFGPPGSG--VGCPPGVDSHSQRSYLPPHIPDYHARNFSSNVAAPGPR 246
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+ +E R++C +GG+IGKGGA I ++ ++GA++KV + + D+ +I +S++
Sbjct: 247 FFIE-QEIVFRMICLNEMVGGIIGKGGATIRALQSDTGASVKVIDAVADSDERVIVISAR 305
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
E E S +AV+R+ R SE S + RLLVP+ IGCL+GKGGSII EMR
Sbjct: 306 ENSEMMHSPAQDAVLRVYSRISEASMDKSSAV--PARLLVPSQHIGCLLGKGGSIIAEMR 363
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
+T A+IRI E +P+ A +DE+VQ++G+ +DAL+ + R+R
Sbjct: 364 NVTGASIRIFGNEQIPRCAQRNDELVQVTGNFQSIQDALLHITGRIR 410
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/463 (26%), Positives = 206/463 (44%), Gaps = 69/463 (14%)
Query: 9 GKRSHSQTDY-ADHGP--NKRRYTGD---DRDQFIIGPEDTVYRYLCPIRKIGSIIGRGG 62
G SHSQ Y H P + R ++ + +F I ++ V+R +C +G IIG+GG
Sbjct: 214 GVDSHSQRSYLPPHIPDYHARNFSSNVAAPGPRFFIE-QEIVFRMICLNEMVGGIIGKGG 272
Query: 63 EIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDR 122
++ L+ DT + +++ + V S+ERV+ + +A E+ + SPAQDA+ +V+ R
Sbjct: 273 ATIRALQSDTGASVKVIDAVADSDERVIVI-------SARENSEMMHSPAQDAVLRVYSR 325
Query: 123 VIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLP 182
+ + D V A+LLVPS IGC++GKGG I+ +R+ TGA IRI +E +P
Sbjct: 326 ISEASM------DKSSAVPARLLVPSQHIGCLLGKGGSIIAEMRNVTGASIRIFGNEQIP 379
Query: 183 SCALRSDELVQISGEASVVKKALCQIASRLHD-------NPSRSQHLLASAISNSHSSSG 235
CA R+DELVQ++G ++ AL I R+ D +PS A S H S
Sbjct: 380 RCAQRNDELVQVTGNFQSIQDALLHITGRIRDVIIPPKPHPSGGMSPYPPAGSTPHHPSR 439
Query: 236 SLVGP---TAATPIVGIAPL-----MGPYGGYKGDTAGDWSRSLYSA-PRDDLSSKEFSL 286
P + P + P MGP+ D A + A P + + +
Sbjct: 440 QDPAPPHHSGGMPPYPMHPFRPNHPMGPF-----DVADHRPPGQHPAHPMEHMGADRIPY 494
Query: 287 RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSAT 346
C + G + Q S ++ + D ++ K D+ +
Sbjct: 495 SYGC----------EQGGPRPFLEQPSPRTWAPEAQTA---DAPRSIPDKGLAMDSRKGS 541
Query: 347 IEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
+ SE + + S TT +++P IG + G GS + E+++++ A I +
Sbjct: 542 VAG--------SEN--QVATPTSTTTEVVIPCKYIGFICGTNGSDLAEIQKISGAAITV- 590
Query: 407 PKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+ PK + D V + GD + K A + + L+ +
Sbjct: 591 ---HDPK-PGDTDASVFVCGDPEQTKKAQSLIHAFIFCGLYQK 629
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL-PKENLPKIASEDDEMVQISGDLDLA 431
R+L ++GC++GKGG + MR+ + A IR+ K+ +P A + DE++ ISG A
Sbjct: 115 RMLAAGGQVGCVLGKGGKTVERMRQESGAQIRVFRNKDQVPPCALQGDELIHISGSFSAA 174
Query: 432 KDALIQVMTRLRAN 445
+ AL+ V T L+ N
Sbjct: 175 RKALLLVSTCLQDN 188
>gi|308804768|ref|XP_003079696.1| putative KH domain containing protein (ISS) [Ostreococcus tauri]
gi|116058152|emb|CAL53341.1| putative KH domain containing protein (ISS), partial [Ostreococcus
tauri]
Length = 709
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 152/451 (33%), Positives = 226/451 (50%), Gaps = 68/451 (15%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LCP+ +IG +IG+ G ++K LR +T +++++ T G++ERVV V AS E +D
Sbjct: 72 FRLLCPVARIGRVIGKEGRVIKALRAETGARVKVAPTTRGADERVVLV--ASGEELMMDD 129
Query: 105 GDKF---VSPAQDALFKVHDRVIAEE------------------------LRGDEDSDGG 137
GD V+ A+ ALF++ D V +E G+ +GG
Sbjct: 130 GDGSDVPVTTAERALFRIFDTVASESGGALDGTRDGTSSESGSGVPESSSTGGERSMNGG 189
Query: 138 HQV-TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
V +LLVP Q+G +IGKGG ++ IR+ +GA +R++ LP+CA R DEL+QI+
Sbjct: 190 RAVPICRLLVPRAQVGSLIGKGGAVISAIRASSGATVRLMPATMLPTCASRGDELLQITA 249
Query: 197 EA------------SVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAAT 244
+ VK AL +A L + P++ ++S S P A
Sbjct: 250 PVRDTDGNDVDLALASVKSALRMVAKNLREYPTK------------MATSESFRSPLEAF 297
Query: 245 PIVGIAPLMGPYGGYKGDTAGDWSRSL-YSAPRDDLSS------KEFSLRLVCPVANIGG 297
++GI P G S + + R +L+ E RL+CPV+ G
Sbjct: 298 -MLGIKPGANADGDGGNGAGIAGGSSGGHMSTRMNLNGVYVPGGTEIMFRLLCPVSKTGS 356
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
VIG+ G +I QIR E+GA +KV ++ +I VSS + D L+ + A V L R
Sbjct: 357 VIGRNGEVIQQIRSETGAKVKVCEQINNAEERIICVSSND---DGLAPMLAAQVALF-RV 412
Query: 358 SEKIERDSGL-ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIAS 416
I SG + RLLV TS+IGCLIGKGGSII ++R T A +R+LP + LP A+
Sbjct: 413 YRCIVDSSGSDVPLPFRLLVQTSQIGCLIGKGGSIIRQIRNETGATVRVLPSDALPACAN 472
Query: 417 EDDEMVQI-SGDLDLAKDALIQVMTRLRANL 446
DDE+++I D + V RLR N+
Sbjct: 473 ADDELLEIGQWPADACALGIRIVSGRLRGNM 503
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 158/291 (54%), Gaps = 23/291 (7%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSA 95
++ G + ++R LCP+ K GS+IGR GE+++Q+R +T +K+++ E + +EER++ V S
Sbjct: 336 YVPGGTEIMFRLLCPVSKTGSVIGRNGEVIQQIRSETGAKVKVCEQINNAEERIICVSSN 395
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH-QVTAKLLVPSDQIGCV 154
+DG + AQ ALF+V+ ++ DS G + +LLV + QIGC+
Sbjct: 396 -------DDGLAPMLAAQVALFRVYRCIV--------DSSGSDVPLPFRLLVQTSQIGCL 440
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI-SGEASVVKKALCQIASRLH 213
IGKGG I++ IR+ETGA +R+L + LP+CA DEL++I A + ++ RL
Sbjct: 441 IGKGGSIIRQIRNETGATVRVLPSDALPACANADDELLEIGQWPADACALGIRIVSGRLR 500
Query: 214 DNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSL 271
N + SN +S+S + TP + + LM YG Y+ + SL
Sbjct: 501 GNMRHKAAERLNVESNVYSASMTPTMAVQDTPTLQQSELM-MYGMTAYETEPVDTALASL 559
Query: 272 -YSAPRDDLS--SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
SAP ++ + S+ + +IG V+G+GG I+ RQ SGA IK+
Sbjct: 560 SLSAPPVEIPGVTTVNSVHMTISSQHIGSVLGRGGCNISIARQVSGARIKL 610
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 89/187 (47%), Gaps = 35/187 (18%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-----KDEHLPSCALRSDELVQI 194
V +LL P +IG VIGK G++++ +R+ETGA++++ DE + A +EL+
Sbjct: 70 VQFRLLCPVARIGRVIGKEGRVIKALRAETGARVKVAPTTRGADERVVLVA-SGEELMMD 128
Query: 195 SGEASVVKKALCQIA-SRLHDN-PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
G+ S V + A R+ D S S L + S SGS V +++T
Sbjct: 129 DGDGSDVPVTTAERALFRIFDTVASESGGALDGTRDGTSSESGSGVPESSST-------- 180
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
GG + G + P RL+ P A +G +IGKGGA+I+ IR
Sbjct: 181 ----GGERSMNGG------RAVP---------ICRLLVPRAQVGSLIGKGGAVISAIRAS 221
Query: 313 SGAAIKV 319
SGA +++
Sbjct: 222 SGATVRL 228
>gi|224141139|ref|XP_002323932.1| predicted protein [Populus trichocarpa]
gi|222866934|gb|EEF04065.1| predicted protein [Populus trichocarpa]
Length = 722
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 151/448 (33%), Positives = 231/448 (51%), Gaps = 46/448 (10%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFE- 103
+R LC +IG +IG+ G I+K L+ T +K+RI + S +RV+TV ++
Sbjct: 38 FRLLCHASRIGGVIGKAGNIIKGLQQQTGAKVRIEDAPSDSPDRVITVIGPITQSAVVFS 97
Query: 104 --DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
+ VS Q+AL +V +R++ E+ + DS V+ ++L +G VIGKGG++
Sbjct: 98 RIESAVEVSKGQEALVRVFERIL--EVAAESDSVADGVVSCRMLAEVSSVGAVIGKGGKV 155
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ IR + G +I++L D+ LP CA ++E+++I G+ S VKK L ++ L D Q
Sbjct: 156 VEKIRKDCGCRIKVLVDK-LPDCAASNEEMIEIEGDVSAVKKGLVAVSRCLQD----CQP 210
Query: 222 LLASAISNS---------------------HSS------SGSLVGPTAATPIVGIAPLMG 254
+ + ++NS HS+ S V PT +G+ +
Sbjct: 211 VDKTRVTNSKPAEAVSRVSLSDVRVEIHPRHSAVLPTIAQNSSVLPTIPQHSLGLPTIPK 270
Query: 255 PYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
Y S D ++ R++C IGGVIGKGG I+ ++ E+G
Sbjct: 271 SSINYASRVHPLSLESDRVVTPDTNIPQQLVFRILCTTDRIGGVIGKGGNIVRALQNETG 330
Query: 315 AAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK-IER--DSGL---I 368
AAI V + +E D+ LITV++ E E SA + +V + R E IE+ D G
Sbjct: 331 AAISVGPTVSECDERLITVTASENPESRYSAAQKTIVLVFSRAVESGIEKGLDPGSSRGS 390
Query: 369 SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILP-KENLPKIASEDDEMVQISGD 427
T RL+V S++GCL+GKGG+II+EMR+ T +IRI+ + PK E D +V+ISGD
Sbjct: 391 PVTARLVVSPSQVGCLLGKGGTIISEMRKATSTSIRIIVGDQRNPKCVPETDHVVEISGD 450
Query: 428 LDLAKDALIQVMTRLRANLFDREGAVST 455
KDA+ V RLR NLF G +ST
Sbjct: 451 FVNVKDAIYHVTGRLRDNLF--SGMLST 476
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 10/179 (5%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P+ V+R LC +IG +IG+GG IV+ L+ +T + I +G TV +ER++TV
Sbjct: 297 PQQLVFRILCTTDRIGGVIGKGGNIVRALQNETGAAISVGPTVSECDERLITV------- 349
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRG--DEDSDGGHQVTAKLLVPSDQIGCVIGK 157
A E+ + S AQ + V R + + D S G VTA+L+V Q+GC++GK
Sbjct: 350 TASENPESRYSAAQKTIVLVFSRAVESGIEKGLDPGSSRGSPVTARLVVSPSQVGCLLGK 409
Query: 158 GGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GG I+ +R T IRI+ D+ P C +D +V+ISG+ VK A+ + RL DN
Sbjct: 410 GGTIISEMRKATSTSIRIIVGDQRNPKCVPETDHVVEISGDFVNVKDAIYHVTGRLRDN 468
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 106/201 (52%), Gaps = 20/201 (9%)
Query: 255 PYGGY-KGDTAGDWSRSLYSAPRDDLS--SKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
P Y G +A S+ SA L S S RL+C + IGGVIGK G II ++Q
Sbjct: 4 PNPNYPNGSSANKRSKPQPSASAAPLPVPSGHVSFRLLCHASRIGGVIGKAGNIIKGLQQ 63
Query: 312 ESGAAIKVDSSSTEGDDCLITV-----SSKEFFEDTLSAT-----IEAVVRLQPRCSE-K 360
++GA ++++ + ++ D +ITV S F SA EA+VR+ R E
Sbjct: 64 QTGAKVRIEDAPSDSPDRVITVIGPITQSAVVFSRIESAVEVSKGQEALVRVFERILEVA 123
Query: 361 IERDS---GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASE 417
E DS G++S R+L S +G +IGKGG ++ ++R+ I++L + LP A+
Sbjct: 124 AESDSVADGVVS--CRMLAEVSSVGAVIGKGGKVVEKIRKDCGCRIKVL-VDKLPDCAAS 180
Query: 418 DDEMVQISGDLDLAKDALIQV 438
++EM++I GD+ K L+ V
Sbjct: 181 NEEMIEIEGDVSAVKKGLVAV 201
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 47/183 (25%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
GH V+ +LL + +IG VIGK G I++ ++ +TGA++RI E PS + D ++ + G
Sbjct: 34 GH-VSFRLLCHASRIGGVIGKAGNIIKGLQQQTGAKVRI---EDAPSDS--PDRVITVIG 87
Query: 197 EASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY 256
+ +I S + S+ Q L I+ +A
Sbjct: 88 PITQSAVVFSRIESAVEV--SKGQEALVRVFER----------------ILEVA------ 123
Query: 257 GGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA 316
A D ++ S R++ V+++G VIGKGG ++ +IR++ G
Sbjct: 124 -----------------AESDSVADGVVSCRMLAEVSSVGAVIGKGGKVVEKIRKDCGCR 166
Query: 317 IKV 319
IKV
Sbjct: 167 IKV 169
>gi|147832545|emb|CAN68300.1| hypothetical protein VITISV_009906 [Vitis vinifera]
Length = 408
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/138 (67%), Positives = 116/138 (84%), Gaps = 1/138 (0%)
Query: 126 EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
EE+ G EDS+ +QVT +LLVPS+QIGCVIGKGGQI+Q+IRSE+GAQIRILKD+HLPSC+
Sbjct: 270 EEVHG-EDSEEANQVTVRLLVPSNQIGCVIGKGGQIIQSIRSESGAQIRILKDDHLPSCS 328
Query: 186 LRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATP 245
L S+EL+QIS E +V+K L QIASRLHDNPSRSQHL + +SSSGSL+G T+ P
Sbjct: 329 LSSNELIQISREPFIVRKILYQIASRLHDNPSRSQHLFVYVVPIGYSSSGSLMGLTSGAP 388
Query: 246 IVGIAPLMGPYGGYKGDT 263
I+G+APL+G YGGY+GD+
Sbjct: 389 IIGLAPLVGTYGGYRGDS 406
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T RLLVP+++IGC+IGKGG II +R + A IRIL ++LP + +E++QIS + +
Sbjct: 284 TVRLLVPSNQIGCVIGKGGQIIQSIRSESGAQIRILKDDHLPSCSLSSNELIQISREPFI 343
Query: 431 AKDALIQVMTRLRAN 445
+ L Q+ +RL N
Sbjct: 344 VRKILYQIASRLHDN 358
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D + + ++RL+ P IG VIGKGG II IR ESGA I++
Sbjct: 276 DSEEANQVTVRLLVPSNQIGCVIGKGGQIIQSIRSESGAQIRI 318
>gi|326513114|dbj|BAK06797.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 627
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/315 (37%), Positives = 180/315 (57%), Gaps = 26/315 (8%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEA 198
V ++L Q+GCV+GKGG+ V+ +R E+GAQIR+ ++ E +P CAL+ DEL+ ISG
Sbjct: 110 VGCRMLAAGGQVGCVLGKGGKTVERMRQESGAQIRVFRNREQVPPCALQGDELIHISGSF 169
Query: 199 SVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGG 258
S +KAL +++ L DNP S+ SG GP + VG P + P+
Sbjct: 170 SAARKALLLVSTCLQDNPRPD---------TSNFPSGRPFGPPGSG--VGCPPGVDPHSQ 218
Query: 259 ---YKGDTAGDWSRSLYSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQI 309
D+ +S+ PR +E R++C +GGVIGKGG+ I +
Sbjct: 219 RSYLPPPHVPDYHARNFSSNGAAPGPRF-FVEQEIVFRMICLNDMVGGVIGKGGSTIRAL 277
Query: 310 RQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSE-KIERDSGLI 368
+ E+GA++KV + D+ +I +S++E E S + +A++R+ + SE +++ S
Sbjct: 278 QSETGASVKVIDPVADSDERIIVISARENSEMMRSPSQDALLRVYSKISEASMDKSS--- 334
Query: 369 SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL 428
S RLLVP IGCL+GKGGSII EMR+LT A+IRI E +P+ A +DE+VQ++G
Sbjct: 335 SVPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIFGNEQIPRCAQRNDELVQVTGSF 394
Query: 429 DLAKDALIQVMTRLR 443
+DAL+ + R+R
Sbjct: 395 QSIQDALLHITGRIR 409
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 119/213 (55%), Gaps = 21/213 (9%)
Query: 9 GKRSHSQTDY--ADHGP--NKRRYTGDDR---DQFIIGPEDTVYRYLCPIRKIGSIIGRG 61
G HSQ Y H P + R ++ + +F + ++ V+R +C +G +IG+G
Sbjct: 212 GVDPHSQRSYLPPPHVPDYHARNFSSNGAAPGPRFFVE-QEIVFRMICLNDMVGGVIGKG 270
Query: 62 GEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHD 121
G ++ L+ +T + +++ + V S+ER++ + +A E+ + SP+QDAL +V+
Sbjct: 271 GSTIRALQSETGASVKVIDPVADSDERIIVI-------SARENSEMMRSPSQDALLRVYS 323
Query: 122 RVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL 181
++ + D V A+LLVP+ IGC++GKGG I+ +R TGA IRI +E +
Sbjct: 324 KI------SEASMDKSSSVPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIFGNEQI 377
Query: 182 PSCALRSDELVQISGEASVVKKALCQIASRLHD 214
P CA R+DELVQ++G ++ AL I R+ D
Sbjct: 378 PRCAQRNDELVQVTGSFQSIQDALLHITGRIRD 410
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL-PKENLPKIASEDDEMVQISGDLDLA 431
R+L ++GC++GKGG + MR+ + A IR+ +E +P A + DE++ ISG A
Sbjct: 113 RMLAAGGQVGCVLGKGGKTVERMRQESGAQIRVFRNREQVPPCALQGDELIHISGSFSAA 172
Query: 432 KDALIQVMTRLRAN 445
+ AL+ V T L+ N
Sbjct: 173 RKALLLVSTCLQDN 186
>gi|226529077|ref|NP_001146029.1| hypothetical protein [Zea mays]
gi|219885375|gb|ACL53062.1| unknown [Zea mays]
gi|414589866|tpg|DAA40437.1| TPA: hypothetical protein ZEAMMB73_485730 [Zea mays]
Length = 624
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 189/365 (51%), Gaps = 35/365 (9%)
Query: 115 ALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKGGQIVQNIRS 167
A + + V+ + GDE G + V ++L Q+GCV+GKGG+ V+ +R
Sbjct: 77 AAVRAWEHVVGHRVEGDEAMGGEEEEREVTGAVGCRMLAAGWQVGCVLGKGGKTVERMRQ 136
Query: 168 ETGAQIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASA 226
E GAQIR+ ++ E LP A DEL+ ISG S V+KAL +++ L DNP H +
Sbjct: 137 ECGAQIRVFRNREQLPPWAPPGDELIHISGSFSQVRKALLAVSTCLQDNPRPDTHNIPIG 196
Query: 227 ISNSHSSSGSLVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSLYSA------PRDD 278
SG+ G P M P+ Y D+ Y + PR
Sbjct: 197 RPFGLPGSGT-----------GCPPGMDPHSQRSYLPPHIPDYHTRNYPSNAGPPGPRF- 244
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+E R++ +G +IGKGG+ I ++ E+GA IK+ + D+ ++ ++++E
Sbjct: 245 FFEQEIVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILEPVADSDERVVAITAREN 304
Query: 339 FEDTLSATIEAVVRLQPRCSE-KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
+ S +AVVR+ R SE I+R S RLLVP+ IGCL+GKGGSII+EMR+
Sbjct: 305 SDMLHSPAQDAVVRVYSRISEASIDRSS---HTPARLLVPSQHIGCLLGKGGSIISEMRK 361
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDRE---GAVS 454
+T ANIRI E +P+ A +DEMVQ++G +DAL+ + R+R + + G +
Sbjct: 362 ITGANIRIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRDVILPKPHPSGGMP 421
Query: 455 TFVPV 459
+ PV
Sbjct: 422 PYPPV 426
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 115/212 (54%), Gaps = 20/212 (9%)
Query: 9 GKRSHSQTDY-ADHGP--NKRRY---TGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGG 62
G HSQ Y H P + R Y G +F ++ V+R + +GSIIG+GG
Sbjct: 211 GMDPHSQRSYLPPHIPDYHTRNYPSNAGPPGPRFFFE-QEIVFRMIILNEMVGSIIGKGG 269
Query: 63 EIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDR 122
++ L+ +T + I+I E V S+ERVV + A E+ D SPAQDA+ +V+ R
Sbjct: 270 STIRALQSETGACIKILEPVADSDERVVAI-------TARENSDMLHSPAQDAVVRVYSR 322
Query: 123 VIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLP 182
+ + D A+LLVPS IGC++GKGG I+ +R TGA IRI +E +P
Sbjct: 323 I------SEASIDRSSHTPARLLVPSQHIGCLLGKGGSIISEMRKITGANIRIFGNEQIP 376
Query: 183 SCALRSDELVQISGEASVVKKALCQIASRLHD 214
CA R+DE+VQ++G ++ AL I R+ D
Sbjct: 377 RCAQRNDEMVQVTGSFQSIQDALLHITGRIRD 408
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 32/171 (18%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
LRL+CP + + A + R + VD GD+ ++ +S DT +A
Sbjct: 36 LRLLCPSSRV--------ATLRPSRD-----LHVDHPPV-GDEAVLVISGP----DTPAA 77
Query: 346 TIEAVVRLQPRCSEKIERDSGL----------ISFTTRLLVPTSRIGCLIGKGGSIITEM 395
+ A + ++E D + + R+L ++GC++GKGG + M
Sbjct: 78 AVRAWEHV---VGHRVEGDEAMGGEEEEREVTGAVGCRMLAAGWQVGCVLGKGGKTVERM 134
Query: 396 RRLTKANIRIL-PKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRAN 445
R+ A IR+ +E LP A DE++ ISG + AL+ V T L+ N
Sbjct: 135 RQECGAQIRVFRNREQLPPWAPPGDELIHISGSFSQVRKALLAVSTCLQDN 185
>gi|125555220|gb|EAZ00826.1| hypothetical protein OsI_22856 [Oryza sativa Indica Group]
Length = 693
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 141/443 (31%), Positives = 225/443 (50%), Gaps = 66/443 (14%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T +R LCP K+ G + ++R DT + + I PG RV+ SD
Sbjct: 85 TSFRILCPQSKV---YGFPPSFIAKVRDDTNAVVTIHLPYPGDAVRVI---ETSDGARRE 138
Query: 103 EDG-DKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGH---------QVTAKLLVPSDQI 151
DG SPAQ+AL VH R++ E GDED + G +VT +L+VP +
Sbjct: 139 ADGRPPSFSPAQEALLMVHRRILETEPDDGDEDGEYGPRAKDARDRGKVTTRLIVPRLHV 198
Query: 152 GCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
GC++GKGG+I++ +R+ET IRIL +D+H P C S+E+VQ+ GE + VKKA+ I+
Sbjct: 199 GCLLGKGGKIIEQMRAETKTHIRILPRDQHTPRCVSLSEEVVQVVGEGNCVKKAVAIISD 258
Query: 211 RLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATP----IVGIAPLMG----PYG----- 257
RL ++ R + G + P P G A M PYG
Sbjct: 259 RLKESLHRDRGPF----------RGRMNSPEHRFPQEDEYYGGAQQMPAYEEPYGRPDQI 308
Query: 258 ---------GYKGDTAG----DWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGA 304
GY+ D+ G D + L+ DD+ R++CP + ++G
Sbjct: 309 RNNTSMEPPGYEFDSNGGKINDHTEILF----DDI-----IFRILCPSDKVNSLVGTRDG 359
Query: 305 IINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERD 364
++ ++++ G I++ S D+ +I ++S+E + L EA++ LQ +
Sbjct: 360 LLEMLQEDVGVDIRLTDSLDGSDERIIIITSREGPDHELFPAQEALLHLQTHIVDLGPDK 419
Query: 365 SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQI 424
+I TTRLLVP+S I C G+ GS +++++R T AN++ILP++ LP A E DE++QI
Sbjct: 420 DNII--TTRLLVPSSEIACFEGRDGS-LSDIQRQTSANVQILPRQALPSCALESDELIQI 476
Query: 425 SGDLDLAKDALIQVMTRLRANLF 447
G++ A+DAL+Q+ +LR+ +
Sbjct: 477 VGEIRAARDALVQITAKLRSYFY 499
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 169/359 (47%), Gaps = 36/359 (10%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
+D ++R LCP K+ S++G +++ L+ D IR+ +++ GS+ER++ + S
Sbjct: 337 DDIIFRILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLTDSLDGSDERIIIITSR----- 391
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D + PAQ+AL + ++ D D + +T +LLVPS +I C G+ G
Sbjct: 392 --EGPDHELFPAQEALLHLQTHIV------DLGPDKDNIITTRLLVPSSEIACFEGRDGS 443
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL-----HDN 215
+ +I+ +T A ++IL + LPSCAL SDEL+QI GE + AL QI ++L +
Sbjct: 444 L-SDIQRQTSANVQILPRQALPSCALESDELIQIVGEIRAARDALVQITAKLRSYFYREI 502
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAAT--PIVGIAPLMGPYGGYKGDTAGDWSRSLY- 272
P +Q + + + GS GP + P+ +K D+ G + S
Sbjct: 503 PGPNQLGNITVHGSISPAKGSPRGPYQGSDIPMPSYQQAQHVPASWK-DSGGGANMSFEQ 561
Query: 273 -SAPRDDL---SSKEF--------SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
S DD+ ++K F +L +V P + + + + G+ + QI + SGA + +
Sbjct: 562 GSNINDDMRQSAAKRFAVPLVTRSTLEVVIPKSAVASLTMRAGSKLAQISEMSGATVTLA 621
Query: 321 SSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTS 379
+ + ++ +S D + ++ + L + EK + + + VP S
Sbjct: 622 DERPDAIEKVVRISGTPEQADKAQSLLQGFI-LSSKVKEKFSPNYHSYQYIEKDGVPFS 679
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 29/190 (15%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFED--- 341
S R++CP + V G + I ++R ++ A + + GD + +S +
Sbjct: 86 SFRILCPQSK---VYGFPPSFIAKVRDDTNAVVTI-HLPYPGDAVRVIETSDGARREADG 141
Query: 342 ---TLSATIEAVVRLQPRCSE----------------KIERDSGLISFTTRLLVPTSRIG 382
+ S EA++ + R E K RD G + TTRL+VP +G
Sbjct: 142 RPPSFSPAQEALLMVHRRILETEPDDGDEDGEYGPRAKDARDRGKV--TTRLIVPRLHVG 199
Query: 383 CLIGKGGSIITEMRRLTKANIRILPK-ENLPKIASEDDEMVQISGDLDLAKDALIQVMTR 441
CL+GKGG II +MR TK +IRILP+ ++ P+ S +E+VQ+ G+ + K A+ + R
Sbjct: 200 CLLGKGGKIIEQMRAETKTHIRILPRDQHTPRCVSLSEEVVQVVGEGNCVKKAVAIISDR 259
Query: 442 LRANLFDREG 451
L+ +L G
Sbjct: 260 LKESLHRDRG 269
>gi|414589867|tpg|DAA40438.1| TPA: hypothetical protein ZEAMMB73_485730 [Zea mays]
Length = 640
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 189/365 (51%), Gaps = 35/365 (9%)
Query: 115 ALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKGGQIVQNIRS 167
A + + V+ + GDE G + V ++L Q+GCV+GKGG+ V+ +R
Sbjct: 77 AAVRAWEHVVGHRVEGDEAMGGEEEEREVTGAVGCRMLAAGWQVGCVLGKGGKTVERMRQ 136
Query: 168 ETGAQIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASA 226
E GAQIR+ ++ E LP A DEL+ ISG S V+KAL +++ L DNP H +
Sbjct: 137 ECGAQIRVFRNREQLPPWAPPGDELIHISGSFSQVRKALLAVSTCLQDNPRPDTHNIPIG 196
Query: 227 ISNSHSSSGSLVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSLYSA------PRDD 278
SG+ G P M P+ Y D+ Y + PR
Sbjct: 197 RPFGLPGSGT-----------GCPPGMDPHSQRSYLPPHIPDYHTRNYPSNAGPPGPRF- 244
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+E R++ +G +IGKGG+ I ++ E+GA IK+ + D+ ++ ++++E
Sbjct: 245 FFEQEIVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILEPVADSDERVVAITAREN 304
Query: 339 FEDTLSATIEAVVRLQPRCSE-KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
+ S +AVVR+ R SE I+R S RLLVP+ IGCL+GKGGSII+EMR+
Sbjct: 305 SDMLHSPAQDAVVRVYSRISEASIDRSS---HTPARLLVPSQHIGCLLGKGGSIISEMRK 361
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDRE---GAVS 454
+T ANIRI E +P+ A +DEMVQ++G +DAL+ + R+R + + G +
Sbjct: 362 ITGANIRIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRDVILPKPHPSGGMP 421
Query: 455 TFVPV 459
+ PV
Sbjct: 422 PYPPV 426
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 115/212 (54%), Gaps = 20/212 (9%)
Query: 9 GKRSHSQTDY-ADHGP--NKRRY---TGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGG 62
G HSQ Y H P + R Y G +F ++ V+R + +GSIIG+GG
Sbjct: 211 GMDPHSQRSYLPPHIPDYHTRNYPSNAGPPGPRFFFE-QEIVFRMIILNEMVGSIIGKGG 269
Query: 63 EIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDR 122
++ L+ +T + I+I E V S+ERVV + A E+ D SPAQDA+ +V+ R
Sbjct: 270 STIRALQSETGACIKILEPVADSDERVVAI-------TARENSDMLHSPAQDAVVRVYSR 322
Query: 123 VIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLP 182
+ + D A+LLVPS IGC++GKGG I+ +R TGA IRI +E +P
Sbjct: 323 ISEASI------DRSSHTPARLLVPSQHIGCLLGKGGSIISEMRKITGANIRIFGNEQIP 376
Query: 183 SCALRSDELVQISGEASVVKKALCQIASRLHD 214
CA R+DE+VQ++G ++ AL I R+ D
Sbjct: 377 RCAQRNDEMVQVTGSFQSIQDALLHITGRIRD 408
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 32/171 (18%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
LRL+CP + + A + R + VD GD+ ++ +S DT +A
Sbjct: 36 LRLLCPSSRV--------ATLRPSRD-----LHVDHPPV-GDEAVLVISGP----DTPAA 77
Query: 346 TIEAVVRLQPRCSEKIERDSGL----------ISFTTRLLVPTSRIGCLIGKGGSIITEM 395
+ A + ++E D + + R+L ++GC++GKGG + M
Sbjct: 78 AVRAWEHV---VGHRVEGDEAMGGEEEEREVTGAVGCRMLAAGWQVGCVLGKGGKTVERM 134
Query: 396 RRLTKANIRIL-PKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRAN 445
R+ A IR+ +E LP A DE++ ISG + AL+ V T L+ N
Sbjct: 135 RQECGAQIRVFRNREQLPPWAPPGDELIHISGSFSQVRKALLAVSTCLQDN 185
>gi|54290950|dbj|BAD61631.1| putative HEN4 [Oryza sativa Japonica Group]
Length = 662
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 141/443 (31%), Positives = 225/443 (50%), Gaps = 66/443 (14%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T +R LCP K+ G + ++R DT + + I PG RV+ SD
Sbjct: 85 TSFRILCPQSKV---YGFPPSFIAKVRDDTNAVVTIHLPYPGDAVRVI---ETSDGARRE 138
Query: 103 EDG-DKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGH---------QVTAKLLVPSDQI 151
DG SPAQ+AL VH R++ E GDED + G +VT +L+VP +
Sbjct: 139 ADGRPPSFSPAQEALLMVHRRILETEPDDGDEDGEYGPRAKDARDRGKVTTRLIVPRLHV 198
Query: 152 GCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
GC++GKGG+I++ +R+ET IRIL +D+H P C S+E+VQ+ GE + VKKA+ I+
Sbjct: 199 GCLLGKGGKIIEQMRAETKTHIRILPRDQHTPRCVSLSEEVVQVVGEGNCVKKAVAIISD 258
Query: 211 RLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATP----IVGIAPLMG----PYG----- 257
RL ++ R + G + P P G A M PYG
Sbjct: 259 RLKESLHRDRGPF----------RGRMNSPEHRFPQEDEYYGGAQQMPAYEEPYGRPDQI 308
Query: 258 ---------GYKGDTAG----DWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGA 304
GY+ D+ G D + L+ DD+ R++CP + ++G
Sbjct: 309 RNNTSMELPGYEFDSNGGKINDHTEILF----DDI-----IFRILCPSDKVNSLVGTRDG 359
Query: 305 IINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERD 364
++ ++++ G I++ S D+ +I ++S+E + L EA++ LQ +
Sbjct: 360 LLEMLQEDVGVDIRLTDSLDGSDERIIIITSREGPDHELFPAQEALLHLQTHIVDLGPDK 419
Query: 365 SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQI 424
+I TTRLLVP+S I C G+ GS +++++R T AN++ILP++ LP A E DE++QI
Sbjct: 420 DNII--TTRLLVPSSEIACFEGRDGS-LSDIQRQTSANVQILPRQALPSCALESDELIQI 476
Query: 425 SGDLDLAKDALIQVMTRLRANLF 447
G++ A+DAL+Q+ +LR+ +
Sbjct: 477 VGEIRAARDALVQITAKLRSYFY 499
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 159/331 (48%), Gaps = 35/331 (10%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
+D ++R LCP K+ S++G +++ L+ D IR+ +++ GS+ER++ + S
Sbjct: 337 DDIIFRILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLTDSLDGSDERIIIITSR----- 391
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D + PAQ+AL + ++ D D + +T +LLVPS +I C G+ G
Sbjct: 392 --EGPDHELFPAQEALLHLQTHIV------DLGPDKDNIITTRLLVPSSEIACFEGRDGS 443
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL-----HDN 215
+ +I+ +T A ++IL + LPSCAL SDEL+QI GE + AL QI ++L +
Sbjct: 444 L-SDIQRQTSANVQILPRQALPSCALESDELIQIVGEIRAARDALVQITAKLRSYFYREI 502
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAAT--PIVGIAPLMGPYGGYKGDTAGDWSRSLY- 272
P +Q + + + GS GP + P+ +K D+ G + S
Sbjct: 503 PGPNQLGNITVHGSISPAKGSPRGPYQGSDIPMPSYQQAQHVPASWK-DSGGGANMSFEQ 561
Query: 273 -SAPRDDL---SSKEF--------SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
S DD+ ++K F +L +V P + + + + G+ + QI + SGA + +
Sbjct: 562 GSNINDDMRQSAAKRFAVPLVTRSTLEVVIPKSAVASLTMRAGSKLAQISEMSGATVTLA 621
Query: 321 SSSTEGDDCLITVSSKEFFEDTLSATIEAVV 351
+ + ++ +S D + ++ +
Sbjct: 622 DERPDAIEKVVRISGTPEQADKAQSLLQGFI 652
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 29/190 (15%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFED--- 341
S R++CP + V G + I ++R ++ A + + GD + +S +
Sbjct: 86 SFRILCPQSK---VYGFPPSFIAKVRDDTNAVVTI-HLPYPGDAVRVIETSDGARREADG 141
Query: 342 ---TLSATIEAVVRLQPRCSE----------------KIERDSGLISFTTRLLVPTSRIG 382
+ S EA++ + R E K RD G + TTRL+VP +G
Sbjct: 142 RPPSFSPAQEALLMVHRRILETEPDDGDEDGEYGPRAKDARDRGKV--TTRLIVPRLHVG 199
Query: 383 CLIGKGGSIITEMRRLTKANIRILPK-ENLPKIASEDDEMVQISGDLDLAKDALIQVMTR 441
CL+GKGG II +MR TK +IRILP+ ++ P+ S +E+VQ+ G+ + K A+ + R
Sbjct: 200 CLLGKGGKIIEQMRAETKTHIRILPRDQHTPRCVSLSEEVVQVVGEGNCVKKAVAIISDR 259
Query: 442 LRANLFDREG 451
L+ +L G
Sbjct: 260 LKESLHRDRG 269
>gi|218202392|gb|EEC84819.1| hypothetical protein OsI_31905 [Oryza sativa Indica Group]
Length = 617
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/410 (31%), Positives = 203/410 (49%), Gaps = 52/410 (12%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T R LCP + ++ G + L +D P +E V+++ A
Sbjct: 36 TTLRILCPSSRASALRGAS----RDLHVDQP---------PVGDEAVLSISGPDAPAVAV 82
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIV 162
++ V RV +E G+E+ + V ++L S Q+GCV+GKGG+ V
Sbjct: 83 RAWERVVG----------HRVGGDEAAGEEEREVPGVVGCRMLAASGQVGCVLGKGGKTV 132
Query: 163 QNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP----- 216
+ +R E+GAQIR+ ++ + LP A DEL+ ISG S V+KAL + + L DNP
Sbjct: 133 ERMRQESGAQIRVFRNRDQLPPWAAPVDELIHISGNFSAVRKALLLVTTCLQDNPRPDAS 192
Query: 217 ---SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
+ HS G L P M Y A ++S ++ +
Sbjct: 193 NFPPGRFGPPGPVGIDPHSQRGYL------------PPSMPDY------HARNYSSNMAA 234
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
+E R++C +G +IGKGG+ I ++ E+GA+IK+ +++ ++ +I +
Sbjct: 235 PGPRFFVEQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVI 294
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
S+ E E S +AV+R+ R SE S + T RLLVP+ IGCL+GKGGSII
Sbjct: 295 SAHENSEMMHSPAQDAVLRVHSRISESSMDKSSAV--TARLLVPSQHIGCLLGKGGSIIA 352
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
EMR++T A IRI E +P+ A +DE+VQ++G +DAL+ + R+R
Sbjct: 353 EMRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIR 402
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 194/440 (44%), Gaps = 65/440 (14%)
Query: 13 HSQTDYADHGPNKRRYTGDDRDQFIIGP-------EDTVYRYLCPIRKIGSIIGRGGEIV 65
HSQ Y P+ Y + + P ++ V+R +C +GSIIG+GG +
Sbjct: 210 HSQRGYLP--PSMPDYHARNYSSNMAAPGPRFFVEQEIVFRMICLNEMVGSIIGKGGSTI 267
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIA 125
+ L+ +T + I+I E SEERV+ + +A E+ + SPAQDA+ +VH R+
Sbjct: 268 RALQSETGASIKIIEPNSDSEERVIVI-------SAHENSEMMHSPAQDAVLRVHSRI-- 318
Query: 126 EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
+ D VTA+LLVPS IGC++GKGG I+ +R TGA IRI +E +P CA
Sbjct: 319 ----SESSMDKSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKITGAGIRIFGNEQIPRCA 374
Query: 186 LRSDELVQISGEASVVKKALCQIASRLHDN--PSRSQHLLASAISNSHSSSGSLVG---P 240
R+DELVQ++G ++ AL I R+ D P + ++ P
Sbjct: 375 QRNDELVQVTGSFQSIQDALLHITGRIRDVIIPMKPHPGGGMPPYPPGGNAPPHHPRQEP 434
Query: 241 TAATPIVGIAPLMGPYGGYKGD-TAGDWSRSLYSAP----RDDLSSKEFSLRLVCPVANI 295
P G+ P P ++ D G + + P + + + C
Sbjct: 435 APPHPTGGMPPY--PMPSFRADRPMGPFDMVDHRPPPPHSMEHMGADRMPYSYGC----- 487
Query: 296 GGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI-TVSSKEFFEDTLSATIEAVVRLQ 354
+GG + Q S +A ++ ++E + TV +F + ++ T +
Sbjct: 488 ----EQGGGPRPFLDQPSPSAWAPEAPNSEAPRNMPETVPPADFRKGAVAGTNQVATP-- 541
Query: 355 PRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
S T +++P IG + G GS + E+++++ A I + + PK
Sbjct: 542 --------------SNATEVIIPRKYIGFICGANGSDLAEIKKMSGATITV----HHPK- 582
Query: 415 ASEDDEMVQISGDLDLAKDA 434
+ + +V I GD D K A
Sbjct: 583 PGDANALVIICGDPDQTKKA 602
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL-PKENLPKIASEDDEMVQISGDLDLA 431
R+L + ++GC++GKGG + MR+ + A IR+ ++ LP A+ DE++ ISG+
Sbjct: 113 RMLAASGQVGCVLGKGGKTVERMRQESGAQIRVFRNRDQLPPWAAPVDELIHISGNFSAV 172
Query: 432 KDALIQVMTRLRAN 445
+ AL+ V T L+ N
Sbjct: 173 RKALLLVTTCLQDN 186
>gi|356526304|ref|XP_003531758.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Glycine
max]
Length = 565
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/408 (32%), Positives = 216/408 (52%), Gaps = 67/408 (16%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
D V+R +CP K + GG+ K L E + G+EERVV +
Sbjct: 18 DAVFRIVCPAAKTADVAAIGGDGAKILV----------EDLVGAEERVVVIV-------- 59
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
GD+ S AQ AL +V +R + EE + V+ KL+ PS Q+GCV+G+GG+I
Sbjct: 60 ---GDE--SAAQVALIRVLERTMDEETKNS-------TVSCKLVAPSYQVGCVLGRGGKI 107
Query: 162 VQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
V+ IR ++GA IR+L KD+ DE +QI+G VKKA+ +++ LH+N
Sbjct: 108 VEKIRQDSGAHIRVLPKDQ---PPPPPGDEFIQITGNFGAVKKAVLSVSACLHEN----- 159
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS 280
+ + S GS P + G Y ++AG S ++
Sbjct: 160 ----NYGAFKPSGGGSYAPPDHHS-----------RGAYS-ESAGHSSHRMFV------- 196
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
+E +L+C +G +IGKGG+++ ++ E+GA+I++ + + D+ ++ +S++E E
Sbjct: 197 EEEVVFKLLCRHDKVGSLIGKGGSVVRALQNETGASIQIVEAGPDSDERVVVISAQETSE 256
Query: 341 DTLSATIEAVVRLQPRCSE-KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
S EAV+R+ R +E E + +++ +LLV + ++GCL+GKGG +I+EMRR T
Sbjct: 257 QKHSPAQEAVIRVHCRLTEIGFEPSAAVVA---KLLVRSPQVGCLLGKGGLVISEMRRAT 313
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
A+IRI KE + K S+++E+VQ+ G L +DAL + R+R +F
Sbjct: 314 GASIRIFSKEQI-KYISQNEEVVQVIGSLQSVQDALFHITNRIRETIF 360
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 107/174 (61%), Gaps = 14/174 (8%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+ V++ LC K+GS+IG+GG +V+ L+ +T + I+I E P S+ERVV + +
Sbjct: 198 EEVVFKLLCRHDKVGSLIGKGGSVVRALQNETGASIQIVEAGPDSDERVVVI-------S 250
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A E ++ SPAQ+A+ +VH R+ E+ G E S V AKLLV S Q+GC++GKGG
Sbjct: 251 AQETSEQKHSPAQEAVIRVHCRLT--EI-GFEPSAA---VVAKLLVRSPQVGCLLGKGGL 304
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
++ +R TGA IRI E + + +++E+VQ+ G V+ AL I +R+ +
Sbjct: 305 VISEMRRATGASIRIFSKEQIKYIS-QNEEVVQVIGSLQSVQDALFHITNRIRE 357
>gi|449448150|ref|XP_004141829.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 716
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 145/474 (30%), Positives = 224/474 (47%), Gaps = 82/474 (17%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P DT++R LCP K+ SI+ + LR ++I + E +P EE V+ + + S
Sbjct: 65 PSDTLFRLLCPASKVSSIL-------RHLRDIPGARIHVDEPLPSCEECVLVILAGSPSK 117
Query: 100 NAFEDGDKFVSPAQDALFKVHD-------------------------RVIAEELRGDEDS 134
A +P D F+ HD R +R +EDS
Sbjct: 118 PAH------TNPGNDREFREHDVHRNVSSDTVAGDSDERSQAQQALLRTFESIVRMNEDS 171
Query: 135 -------------------DGGHQ---VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQ 172
GG V +LL PS Q+G V+G+GG+ V+ IR E+ A
Sbjct: 172 GENQEIQKKNADSAPNDRISGGETDGLVVCRLLAPSHQVGRVLGRGGKTVEKIRQESMAH 231
Query: 173 IRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHS 232
++I + P+CA DEL+QISG S V KAL ++S L D+P + +S+S
Sbjct: 232 VKIFPKDQNPACASPQDELIQISGNFSAVMKALSSVSSCLQDSPR---------VDSSNS 282
Query: 233 SSGSLVGPTAATPIVGIA-PLMGPYGGYKGDTAGDW-SRSLYSAPRDDLS--------SK 282
SS +GPT+ + + P Y D+ SRS S P + + +
Sbjct: 283 SSTKSLGPTSHASSMSVQDEEPSPRRRYGSHHNADYRSRSYSSIPGHENAGAGPRAAMEE 342
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
+ RL+C +G +IGKGG ++ ++ E+GA+IK+ + + D+ L+ +S++E E T
Sbjct: 343 DVVFRLLCQPDKVGSLIGKGGTVVRALQNETGASIKI-VDTPDLDERLVVISARETLEQT 401
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKAN 402
S EAV+R R +E I + G + RLLV +IG L+G+GG II +MRR T +
Sbjct: 402 YSPAQEAVIRAHCRIAE-IGYEPG-AAVVARLLVHGQQIGYLVGRGGHIINDMRRGTGTS 459
Query: 403 IRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
I+I P++ + DE+VQ+ G+L +DAL + R+R F V F
Sbjct: 460 IQIFPRDQIQNGGPMSDEVVQVIGNLPSVQDALFHITNRIRDTFFPMRPHVPNF 513
>gi|356522258|ref|XP_003529764.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 559
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 210/407 (51%), Gaps = 71/407 (17%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
D V+R +CP K + GG+ K L D S +EERVV +
Sbjct: 18 DAVFRIVCPAAKTEDVATIGGDGAKILVEDLVS----------AEERVVVIVGEE----- 62
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
S AQ AL +V +R + EE + V+ KL+ PS Q+GCV+G+GG+I
Sbjct: 63 --------SAAQVALVRVFERTVDEETKNS-------TVSCKLVAPSYQVGCVLGRGGKI 107
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ IR +TGA IR+L + P +E +QI+G VKKA+ +++ +DN
Sbjct: 108 VEKIRQDTGAHIRVLPKDQPPLPPPPGEEFIQITGNFGAVKKAVLSVSACFYDN------ 161
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSS 281
+SG+ PL G ++AG S ++
Sbjct: 162 -----------NSGAF------------KPLDHHSRGCYSESAGHSSHRMFL-------E 191
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFED 341
++ +L+C +G +IGKGG+++ ++ E+GA+I++ + + D+ ++ +S++E E
Sbjct: 192 EDVVFKLLCHHEKVGSLIGKGGSVVRALQNETGASIQIVEAGPDSDERVVVISARETSEQ 251
Query: 342 TLSATIEAVVRLQPRCSE-KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
S EAV+R+ R +E E + +++ +LLV + ++GCL+GKGG +I+EMRR+T
Sbjct: 252 KHSPAQEAVIRVHCRLTEIGFEPSAAVVA---KLLVRSPQVGCLLGKGGLVISEMRRVTG 308
Query: 401 ANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
A+IRI KE + K S+++E+VQ+ G L +DAL + +R+R +F
Sbjct: 309 ASIRIFSKEQI-KYISQNEEVVQVIGSLQSVQDALFHITSRIRETIF 354
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 107/174 (61%), Gaps = 14/174 (8%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
ED V++ LC K+GS+IG+GG +V+ L+ +T + I+I E P S+ERVV + +
Sbjct: 192 EDVVFKLLCHHEKVGSLIGKGGSVVRALQNETGASIQIVEAGPDSDERVVVI-------S 244
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A E ++ SPAQ+A+ +VH R+ E+ G E S V AKLLV S Q+GC++GKGG
Sbjct: 245 ARETSEQKHSPAQEAVIRVHCRLT--EI-GFEPSAA---VVAKLLVRSPQVGCLLGKGGL 298
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
++ +R TGA IRI E + + +++E+VQ+ G V+ AL I SR+ +
Sbjct: 299 VISEMRRVTGASIRIFSKEQIKYIS-QNEEVVQVIGSLQSVQDALFHITSRIRE 351
>gi|449492545|ref|XP_004159029.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 716
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 144/474 (30%), Positives = 223/474 (47%), Gaps = 82/474 (17%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P DT++R LCP K+ SI+ + LR ++I + E +P EE V+ + + S
Sbjct: 65 PSDTLFRLLCPASKVSSIL-------RHLRDIPGARIHVDEPLPSCEECVLVILAGSPSK 117
Query: 100 NAFEDGDKFVSPAQDALFKVHD-------------------------RVIAEELRGDEDS 134
+P D F+ HD R +R +EDS
Sbjct: 118 ------PTHTNPGNDREFREHDVHRNVSSDTVAGDSDERSQAQQALLRTFESIVRMNEDS 171
Query: 135 -------------------DGGHQ---VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQ 172
GG V +LL PS Q+G V+G+GG+ V+ IR E+ A
Sbjct: 172 GENQEIQKKNADSAPNDRISGGETDGLVVCRLLAPSHQVGRVLGRGGKTVEKIRQESMAH 231
Query: 173 IRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHS 232
++I + P+CA DEL+QISG S V KAL ++S L D+P + +S+S
Sbjct: 232 VKIFPKDQNPACASPQDELIQISGNFSAVMKALSSVSSCLQDSPR---------VDSSNS 282
Query: 233 SSGSLVGPTAATPIVGIA-PLMGPYGGYKGDTAGDW-SRSLYSAPRDDLS--------SK 282
SS +GPT+ + + P Y D+ SRS S P + + +
Sbjct: 283 SSTKSLGPTSHASSMSVQDEEPSPRRRYGSHHNADYRSRSYSSIPGHENAGAGPRAAMEE 342
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
+ RL+C +G +IGKGG ++ ++ E+GA+IK+ + + D+ L+ +S++E E T
Sbjct: 343 DVVFRLLCQPDKVGSLIGKGGTVVRALQNETGASIKI-VDTPDLDERLVVISARETLEQT 401
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKAN 402
S EAV+R R +E I + G + RLLV +IG L+G+GG II +MRR T +
Sbjct: 402 YSPAQEAVIRAHCRIAE-IGYEPG-AAVVARLLVHGQQIGYLVGRGGHIINDMRRGTGTS 459
Query: 403 IRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
I+I P++ + DE+VQ+ G+L +DAL + R+R F V F
Sbjct: 460 IQIFPRDQIQNGGPMSDEVVQVIGNLPSVQDALFHITNRIRDTFFPMRPHVPNF 513
>gi|147767494|emb|CAN60206.1| hypothetical protein VITISV_036062 [Vitis vinifera]
Length = 242
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/258 (45%), Positives = 144/258 (55%), Gaps = 62/258 (24%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
MAG+RNSY K++ SQ+DY D+G NKR GDDR+ F IGP+DTVY L ++
Sbjct: 1 MAGKRNSYEKQAQSQSDYGDNGGNKRINPGDDRNPFTIGPDDTVYIDLYALK-------- 52
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
ER+ E F DK VS KVH
Sbjct: 53 --------------------------ERL--------EDALFRVHDKVVSE------KVH 72
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
ED + QVT +LLV SDQIGCVIGKGGQI+QNI SE+GAQI ILK++H
Sbjct: 73 ----------SEDFEEASQVTVQLLVTSDQIGCVIGKGGQIIQNIYSESGAQIYILKNDH 122
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
L SCAL DELVQISGE + L ++ +LH QHLLAS + +SS GSL+GP
Sbjct: 123 LLSCALSFDELVQISGE----RPLLGRLFIKLHLFFMIIQHLLASIVPIGYSSGGSLIGP 178
Query: 241 TAATPIVGIAPLMGPYGG 258
T+ PI+G+APL+G YGG
Sbjct: 179 TSGAPIMGLAPLVGTYGG 196
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 8/124 (6%)
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
KE ED L + VV + SE E S T +LLV + +IGC+IGKGG II +
Sbjct: 52 KERLEDALFRVHDKVVS-EKVHSEDFEEAS---QVTVQLLVTSDQIGCVIGKGGQIIQNI 107
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVST 455
+ A I IL ++L A DE+VQISG+ + L ++ +L + +++
Sbjct: 108 YSESGAQIYILKNDHLLSCALSFDELVQISGE----RPLLGRLFIKLHLFFMIIQHLLAS 163
Query: 456 FVPV 459
VP+
Sbjct: 164 IVPI 167
>gi|356529691|ref|XP_003533422.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 611
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 140/438 (31%), Positives = 221/438 (50%), Gaps = 24/438 (5%)
Query: 29 TGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEER 88
+ + R F + P +R +C +G +IG G IV QLR +T KI +++ +E+R
Sbjct: 36 SNNKRPVFKVLPGQIAFRLVCHASIVGGLIGSSGSIVSQLRRETACKIHCEDSLSSAEDR 95
Query: 89 VVTVYSASDETNAFEDGDK---FVSPAQDALFKVHDRVIAEELRGDEDSDGG--HQVTAK 143
V+ V + + GD VS AQ+A+ +V +RV E +S+ +V +K
Sbjct: 96 VILVIGSVSPRKGLQLGDGGEVEVSSAQEAIVRVFERVWGLEAEKGVNSNRAVNSEVFSK 155
Query: 144 LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKK 203
LL + QIG V+GKGG+ + IR+ TGA+IR+ P CA + +ELV I+G VKK
Sbjct: 156 LLAHTSQIGAVVGKGGKNITAIRNSTGAKIRVCPP---PQCATKDEELVLITGGILAVKK 212
Query: 204 ALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDT 263
AL ++ L D P + ++S+I S S P A + L+ G
Sbjct: 213 ALISVSHCLQDCPPLCKVPVSSSIPTVSSFDRSSSDPNAEL-FPRLNSLLTSMEGLS--- 268
Query: 264 AGDWSRSLYSAPRDDLSSK----EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+ R+ S + SK E RL+C G VIGK GAI+ + ++GA+I
Sbjct: 269 --IYERTTNSNESSNRDSKGGEHEVVFRLLCSNNVAGSVIGKRGAIVRALESKTGASIIF 326
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK------IERDSGLISFTTR 373
+ +E + ++T+S+ E E S +AV+ + R E ++ S T R
Sbjct: 327 AAPLSEHAERIVTISAIESLESCNSPAQDAVILVFARIIEDHIGKGFLQVSSMESPVTAR 386
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
LLV TS + G G +I E+R +T A+I+IL E++P AS+DD +VQI+G+ ++
Sbjct: 387 LLVATSTVNSWSGNEGQVILELREVTGADIQILHGESVPNGASDDDVVVQITGEYRCVQN 446
Query: 434 ALIQVMTRLRANLFDREG 451
AL ++ +R+R NL E
Sbjct: 447 ALYKITSRIRDNLSPNEA 464
>gi|326490983|dbj|BAK05591.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 688
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 137/432 (31%), Positives = 222/432 (51%), Gaps = 40/432 (9%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
+ T +R LCP K G + + D+ + I I PG RV+ +D T
Sbjct: 107 QTTSFRILCPESKA---YGFPASFINNAQDDSGAIITIHPPFPGDPVRVI---ETADGTL 160
Query: 101 AFEDG-DKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGH---------QVTAKLLVPSD 149
DG SPAQ+AL VH R++ + GDED + G +VT +L+VP
Sbjct: 161 READGRPPMFSPAQEALLMVHRRILETQPDDGDEDGEYGPRGKDARDRGKVTTRLIVPRQ 220
Query: 150 QIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQI 208
+GC++GKGG+I++ +RSET IRIL +++++P C S+++VQ+ GE + VKKA+ I
Sbjct: 221 HVGCLLGKGGKIIEQMRSETKTHIRILPREQNMPRCLSLSEKVVQVVGEGNNVKKAVAII 280
Query: 209 ASRLHDNPSRSQ-HLLASAISNSH--SSSGSLVG-----PTAATPIVGIAPL-----MGP 255
+ RL ++ R + L S H S + +G P P + M P
Sbjct: 281 SDRLKESLHRDRGPFLRGRNSPEHRISQADEYLGGGQQMPAFEEPYPRFDQIRNNGSMEP 340
Query: 256 YGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGA 315
GY+ D+ G P D E R++CP ++G II+ ++ E G
Sbjct: 341 -PGYEFDSNGSKFNEHPEIPYD-----EIIFRILCPNDKAISLVGSRDGIIDMLQAEVGV 394
Query: 316 AIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLL 375
+++ D+ + ++S+E + L EA++ +Q + +I TTRLL
Sbjct: 395 DVRLTDLIAGSDERTLIITSREGPDHELFPAQEALLHIQTFIVDLGPDKDNII--TTRLL 452
Query: 376 VPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDAL 435
VP+S I C G+ GS +++++R T AN++ILP+E LP A E DE++QI G++ A++AL
Sbjct: 453 VPSSEIACFEGRDGS-LSDIQRQTSANVQILPREELPSCALESDELIQIVGEIRAARNAL 511
Query: 436 IQVMTRLRANLF 447
+QV T+LR+ ++
Sbjct: 512 MQVTTKLRSYIY 523
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 145/301 (48%), Gaps = 37/301 (12%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ ++R LCP K S++G I+ L+ + +R+ + + GS+ER + + S
Sbjct: 361 DEIIFRILCPNDKAISLVGSRDGIIDMLQAEVGVDVRLTDLIAGSDERTLIITSR----- 415
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D + PAQ+AL + ++ D D + +T +LLVPS +I C G+ G
Sbjct: 416 --EGPDHELFPAQEALLHIQTFIV------DLGPDKDNIITTRLLVPSSEIACFEGRDGS 467
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL-----HDN 215
+ +I+ +T A ++IL E LPSCAL SDEL+QI GE + AL Q+ ++L +
Sbjct: 468 L-SDIQRQTSANVQILPREELPSCALESDELIQIVGEIRAARNALMQVTTKLRSYIYREM 526
Query: 216 PSRSQ----HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
P+ Q ++ S S G G PI AP M + D+ S S
Sbjct: 527 PAPIQIGGINVHGSISPAKGSPRGLYAGNDLPMPIYQQAPQMA-TSWHSKDSGLSASGSF 585
Query: 272 Y--SAPRDDL---SSKEF--------SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIK 318
S+ DD+ ++K + +L +V P + + + + G+ + QI + SGA++
Sbjct: 586 EQGSSINDDMRQSNTKRYAVPLVTRSTLEVVIPQSAVASLSMRAGSKLAQISEMSGASVT 645
Query: 319 V 319
+
Sbjct: 646 L 646
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 29/190 (15%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI------TVSSKEF 338
S R++CP + G + IN + +SGA I + GD + T+ +
Sbjct: 110 SFRILCPESK---AYGFPASFINNAQDDSGAIITI-HPPFPGDPVRVIETADGTLREADG 165
Query: 339 FEDTLSATIEAVVRLQPRCSE----------------KIERDSGLISFTTRLLVPTSRIG 382
S EA++ + R E K RD G + TTRL+VP +G
Sbjct: 166 RPPMFSPAQEALLMVHRRILETQPDDGDEDGEYGPRGKDARDRGKV--TTRLIVPRQHVG 223
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKE-NLPKIASEDDEMVQISGDLDLAKDALIQVMTR 441
CL+GKGG II +MR TK +IRILP+E N+P+ S +++VQ+ G+ + K A+ + R
Sbjct: 224 CLLGKGGKIIEQMRSETKTHIRILPREQNMPRCLSLSEKVVQVVGEGNNVKKAVAIISDR 283
Query: 442 LRANLFDREG 451
L+ +L G
Sbjct: 284 LKESLHRDRG 293
>gi|356496890|ref|XP_003517298.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 602
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 145/458 (31%), Positives = 229/458 (50%), Gaps = 31/458 (6%)
Query: 14 SQTDYADHGPNKRRYT-----GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQL 68
S TD+ KR T R F + P +R +C +G +IG G IV QL
Sbjct: 7 SDTDHQTTPSPKRSNTTTTNRSSKRPVFKVLPGQIAFRLVCHASTVGGLIGSSGSIVSQL 66
Query: 69 RIDTKSKIRIGETVPGSEERVVTVYSASDETNAF---EDGDKFVSPAQDALFKVHDRVIA 125
R +T KI +++ +E+RV+ V + + G+ VS AQ+A+ +V +RV
Sbjct: 67 RRETGCKIHCEDSLSSAEDRVILVIGSLSPRKGLLLGDGGEVEVSSAQEAVVRVFERVWD 126
Query: 126 EELRGDEDSDGG--HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPS 183
E +S+ +V +KLL + QIG V+GKGG+ + IR+ TGA+IR+ P
Sbjct: 127 LEAEKGVNSNRAVNGEVFSKLLAHTSQIGAVVGKGGKNITAIRNNTGAKIRVFPP---PQ 183
Query: 184 CALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAA 243
CA + +ELVQI+G VKKAL ++ L D P L S + + S ++
Sbjct: 184 CATKDEELVQITGGILAVKKALISVSHCLQDCPP-----LCKVPVTSSTPTVSSSDRLSS 238
Query: 244 TPIVGIAP-LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSK----EFSLRLVCPVANIGGV 298
P + P L +G + + R+ S + SK E RL+C G V
Sbjct: 239 DPNAELFPHLNSLLTSMEGLSI--YERTTNSNETSNRDSKGAEHEVVFRLLCSNNVAGSV 296
Query: 299 IGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCS 358
IGK GAI+ + ++GA+I + +E + ++T+S+ E E S +AV+ + R
Sbjct: 297 IGKRGAIVRALESKTGASIIFAAPLSEHAERIVTISAVESLESCNSPAQDAVILVFARII 356
Query: 359 EK------IERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLP 412
E ++ S T RLLV TS + C G G +I+E+R +T A+I+IL E++P
Sbjct: 357 EDHIGKGFLQVSSMESPVTARLLVATSTVNCFSGNEGQVISELREVTGADIQILHGESVP 416
Query: 413 KIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDRE 450
AS++D +VQI+G+ ++AL ++ +R+R NL E
Sbjct: 417 NGASDEDVVVQITGEYRCVQNALYKITSRIRDNLSPNE 454
>gi|357124311|ref|XP_003563844.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 666
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/431 (31%), Positives = 219/431 (50%), Gaps = 36/431 (8%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T +R LCP K G + + + D+ + I I G RV+ + +D
Sbjct: 93 TSFRILCPESKT---YGFPASFIIKAQDDSGAIITIHAPFAGDPVRVIEM---ADGVPRD 146
Query: 103 EDG-DKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGH---------QVTAKLLVPSDQI 151
DG SPAQ+AL VH R++ E GDED + G +VT +L+VP +
Sbjct: 147 VDGRPPMFSPAQEALIMVHRRILETEPDDGDEDGEYGPRGKDARDRGKVTTRLVVPRLHV 206
Query: 152 GCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
GC++GKGG+I++ +RSET IRIL +D++ P C S+E+VQI GE + VKKA+ I+
Sbjct: 207 GCLLGKGGKIIEQMRSETKTHIRILPRDQNTPRCVSLSEEVVQIVGEGNCVKKAVAIISD 266
Query: 211 RLHDNPSRSQHLLASAISNSHSSSGS---LVGPTAATPIVGIAPL-----MGPYGGYKGD 262
RL ++ R + S H S + P P + M P GY+ D
Sbjct: 267 RLKESLHRDRGPFRGRNSPEHRISQADEYQQMPAYEEPFARFDQIRNNGSMEP-PGYEFD 325
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
+ G P D E R++CP ++G I+ ++ E G +++
Sbjct: 326 SNGSKFNEHPEFPYD-----EIIFRILCPNDKANNLVGSRDGILEMLQVEVGVDVRLTDL 380
Query: 323 STEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIG 382
D+ + ++S+E + L EA++ +Q + + +I TTRLLVP+S +
Sbjct: 381 VVGSDERTVIITSREGPDHELFPAQEALLHIQTHIVDLGPDNDNII--TTRLLVPSSEVA 438
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
C G+ GS+ ++++R T AN++ILP+E LP A E DE++QI G + A+ AL+QV T++
Sbjct: 439 CFEGRDGSL-SDIQRQTSANVQILPREELPSCALESDELIQIVGGIRAARSALMQVTTKI 497
Query: 443 RANLFDREGAV 453
R+ ++ RE +V
Sbjct: 498 RSYIY-REMSV 507
>gi|255583245|ref|XP_002532387.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223527911|gb|EEF29999.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 688
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 144/442 (32%), Positives = 219/442 (49%), Gaps = 43/442 (9%)
Query: 37 IIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVY--- 93
++ P +R +C IG +IGR G + Q+R DT + E V GS+ RV+T+
Sbjct: 19 MLQPGQVAFRVVCHASIIGGLIGRSGSAISQIRRDTGCTVHCDEQVQGSDHRVITIVGPA 78
Query: 94 -----------SASDETNAFEDGDKFVSPAQDALFKVHDRVI----AEELRGDEDSDGGH 138
+ D A E+ + VS AQ+A+ +V +R+ E RG D++ +
Sbjct: 79 SPGKRITLNSTTCHDHNGAEEEEKELVSVAQEAVIRVCERMWEVDGQRERRGGVDNNSNN 138
Query: 139 QVTAK----LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
+ LL + QIG V+GKGG+ V +R E+GA IR L H CA + D+L+QI
Sbjct: 139 SGLGEGYCGLLADTTQIGAVVGKGGKNVLRMRRESGADIRFLPPPH---CASKDDQLIQI 195
Query: 195 SGEASVVKKALCQIASRLHDNP--SRSQHLLASAISN-SHSSSGSLVGPTAATPIVGIAP 251
+G VKKAL + LHD P + LL + SH +S A ++
Sbjct: 196 TGSILAVKKALVAVTDCLHDCPPYEKDPTLLMRPLERASHLASSD----PHAEFFPHLSS 251
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSS--KEFSLRLVCPVANIGGVIGKGGAIINQI 309
L+ P G G T+ S P D + E S RL+C G +IGK G I+ +
Sbjct: 252 LLPPLSGNSG-TSHPLSSDAGEDPNQDAEAVRHEVSFRLLCSNGAAGSIIGKKGTIVRTL 310
Query: 310 RQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK-IER--DSG 366
+ E+GA+I + + + ++T+S+ E E S A + + R E IE+ SG
Sbjct: 311 QNETGASIMFAAPMSMSGERVVTISALENLESWHSPAQNAAILVFARSVEHDIEKGHPSG 370
Query: 367 LI---SFTTRLLVPTSRIGCLIGKGGS--IITEMRRLTKANIRILPKENLPKIASEDDEM 421
LI + T RLLV + + CLI KGG+ I +EM ++ A+IRIL E + ASEDD +
Sbjct: 371 LIEGATVTARLLVASDAVCCLIEKGGTGNIDSEMIEVSGADIRILDGEQIMACASEDDVV 430
Query: 422 VQISGDLDLAKDALIQVMTRLR 443
++I+G+ ++AL V +LR
Sbjct: 431 IEITGEYKNVQNALFMVTGKLR 452
>gi|63115359|gb|AAY33858.1| KH domain-containing protein [Betula platyphylla]
Length = 166
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/96 (88%), Positives = 94/96 (97%)
Query: 365 SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQI 424
+G+ISFTTRLLVPTSRIGCLIGKGG+I+TEMRRLTKANIRIL KENLPK+ASEDDEMVQI
Sbjct: 1 AGVISFTTRLLVPTSRIGCLIGKGGAIVTEMRRLTKANIRILSKENLPKVASEDDEMVQI 60
Query: 425 SGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
SGDLD+AKDAL+QV+TRLRANLFDREGAVSTF+PV
Sbjct: 61 SGDLDVAKDALMQVVTRLRANLFDREGAVSTFLPVL 96
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T +LLVP+ +IGC+IGKGG IV +R T A IRIL E+LP A DE+VQISG+ V
Sbjct: 7 TTRLLVPTSRIGCLIGKGGAIVTEMRRLTKANIRILSKENLPKVASEDDEMVQISGDLDV 66
Query: 201 VKKALCQIASRLHDN 215
K AL Q+ +RL N
Sbjct: 67 AKDALMQVVTRLRAN 81
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L P +IG +IG+GG IV ++R TK+ IRI S+E + V S DE G
Sbjct: 9 RLLVPTSRIGCLIGKGGAIVTEMRRLTKANIRI-----LSKENLPKVASEDDEMVQIS-G 62
Query: 106 DKFVSPAQDALFKVHDRVIAE 126
D V A+DAL +V R+ A
Sbjct: 63 DLDV--AKDALMQVVTRLRAN 81
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST-----EGDDCLITVSSKEF 338
F+ RL+ P + IG +IGKGGAI+ ++R+ + A I++ S DD ++ +S
Sbjct: 6 FTTRLLVPTSRIGCLIGKGGAIVTEMRRLTKANIRILSKENLPKVASEDDEMVQISGD-- 63
Query: 339 FEDTLSATIEAVVRLQPRCSEK 360
+ A ++ V RL+ ++
Sbjct: 64 LDVAKDALMQVVTRLRANLFDR 85
>gi|357463999|ref|XP_003602281.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355491329|gb|AES72532.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 646
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 132/436 (30%), Positives = 228/436 (52%), Gaps = 41/436 (9%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T YR LC + G +IG+ G I+K +R T + I + E V G EER++ + SD
Sbjct: 63 TSYRLLCHDLRAGGVIGKSGSIIKSIRQHTGAWINVHEPVAGDEERIIEI---SDTRRRD 119
Query: 103 EDG--DKFVSPAQDALFKVHDRVIAEELRGDEDSD-------GGHQVTAKLLVPSDQIGC 153
DG +F SPAQ+AL +H+R++ + +++ D GG +V+++L+V +G
Sbjct: 120 PDGRMPQF-SPAQEALLLIHERLLENDPGFEDEEDYGGGRGGGGKRVSSRLVVSKMHVGS 178
Query: 154 VIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
++GKGG+I++ +R ET QIRIL +D +LP C S+E+VQ++G+ VK A I+SRL
Sbjct: 179 LLGKGGKIIEQMRIETKTQIRILPRDSYLPRCVSMSEEIVQVTGDIHNVKNAFLVISSRL 238
Query: 213 ----HDNPSRSQHLLASAISNSHSSSGSLVGPT----------AATPIV---GIAPLMGP 255
H + S + S P + P V G +
Sbjct: 239 RESQHRDRSGERGGGGGQFHGRGHSPERFFPPDDDYLPHVSSGSRRPSVERSGFGSRIAT 298
Query: 256 YGGYKGDTAG-DWSRSLYSAP--RDDLSSKE-FSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+ A +S +AP D+ E R++CPV + ++G+ G I+ ++
Sbjct: 299 TNSRNNNHASISYSMDQGAAPVAHDEQPFYEDLIFRILCPVDRVDRIVGESGGILELLQD 358
Query: 312 ESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFT 371
G +++ D+ ++ ++S+E DT+ EA++ +Q + ++ +I T
Sbjct: 359 RVGVDVQISDRVGGSDEQMVIITSEEGPNDTMFPAQEALLHIQ---THIVDLSDSII--T 413
Query: 372 TRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLA 431
TRL+VP+S I CL GK S+ +E+ R T A+++ILP+E LP + DE+VQI G+++ A
Sbjct: 414 TRLIVPSSDIECLDGKNASL-SEIERSTGASVQILPREELPPCIANTDELVQIVGEIEAA 472
Query: 432 KDALIQVMTRLRANLF 447
++ ++ V +LR+ ++
Sbjct: 473 RNVILDVTAKLRSYVY 488
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 97/188 (51%), Gaps = 24/188 (12%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFED--- 341
S RL+C GGVIGK G+II IRQ +GA I V ++ +I +S +
Sbjct: 64 SYRLLCHDLRAGGVIGKSGSIIKSIRQHTGAWINVHEPVAGDEERIIEISDTRRRDPDGR 123
Query: 342 --TLSATIEAVVRLQPRCSEKIERDSGL--------------ISFTTRLLVPTSRIGCLI 385
S EA++ + R +E D G ++RL+V +G L+
Sbjct: 124 MPQFSPAQEALLLIHERL---LENDPGFEDEEDYGGGRGGGGKRVSSRLVVSKMHVGSLL 180
Query: 386 GKGGSIITEMRRLTKANIRILPKEN-LPKIASEDDEMVQISGDLDLAKDALIQVMTRLRA 444
GKGG II +MR TK IRILP+++ LP+ S +E+VQ++GD+ K+A + + +RLR
Sbjct: 181 GKGGKIIEQMRIETKTQIRILPRDSYLPRCVSMSEEIVQVTGDIHNVKNAFLVISSRLRE 240
Query: 445 NLF-DREG 451
+ DR G
Sbjct: 241 SQHRDRSG 248
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 141/315 (44%), Gaps = 43/315 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
ED ++R LCP+ ++ I+G G I++ L+ ++I + V GS+E++V + S
Sbjct: 329 EDLIFRILCPVDRVDRIVGESGGILELLQDRVGVDVQISDRVGGSDEQMVIITSE----- 383
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E + + PAQ+AL + ++ + SD +T +L+VPS I C+ GK
Sbjct: 384 --EGPNDTMFPAQEALLHIQTHIV-------DLSDS--IITTRLIVPSSDIECLDGKNAS 432
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN----- 215
+ + RS TGA ++IL E LP C +DELVQI GE + + + ++L
Sbjct: 433 LSEIERS-TGASVQILPREELPPCIANTDELVQIVGEIEAARNVILDVTAKLRSYVYRDI 491
Query: 216 -------PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWS 268
PS + ++ SNS ++ V +A GG + +
Sbjct: 492 LQWDTVPPSAPLPSVEASSSNSMATVAETATANQNMQSVAVALASKESGG-----STEMG 546
Query: 269 RSLYSAPRDDLSS---------KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+ S RDDL + L +V P + ++ K + + QI + SGA +K+
Sbjct: 547 KQKESDRRDDLPTGLNRTVSLVTRSILEVVIPEYAVPKLLAKSKSKLAQISELSGANVKL 606
Query: 320 DSSSTEGDDCLITVS 334
+ + +I +S
Sbjct: 607 VEDRPDEKEKIIQIS 621
>gi|357128987|ref|XP_003566150.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 729
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/402 (31%), Positives = 212/402 (52%), Gaps = 35/402 (8%)
Query: 84 GSEERVVTVYSASDE--------TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
G EE+V + AS E + + ++ + +A+ V DR+ E+ G+E D
Sbjct: 166 GKEEKVDSERDASKEEKDDPSVAKDTKAEPERVLLSPMNAILHVFDRIFITEI-GNESGD 224
Query: 136 GGHQ---VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+ V+ +LLV Q+G ++G G +++ + +++G +IR+ K E LP CAL DEL
Sbjct: 225 PSGERTPVSFRLLVLDSQVGWLLGNRGSVIKQMSADSGCEIRVSK-EKLPLCALLKDELC 283
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAIS-NSHSSSGSL---VGPTAATPIVG 248
QI+GE V+K L +A L +P R +L S +S ++ + S +L + P + P G
Sbjct: 284 QITGELDSVRKGLNAVAQVLLTHPPRESDVLPSGLSSHAFNRSDALPPGMQPNFSLPFQG 343
Query: 249 IAPLMGPYGGYKG-------DTAGDWSRSLYSAP---------RDDLSSKEFSLRLVCPV 292
+ GP+ T D ++ P + + + RL+C
Sbjct: 344 PSHARGPFDSIDPRPNIPPFPTFPDQRSNIPPFPAFPDALMHSHASVPPEPLTFRLLCSS 403
Query: 293 ANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR 352
+G +IGKGG I I++++G IK+ + + +D +I +S D +S A++
Sbjct: 404 DKVGSIIGKGGNNIKTIQKDTGCEIKILETVPKSEDRVIVISGPAHPGDGISPAQNAILH 463
Query: 353 LQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLP 412
+Q R + + + + RL+V +++GCL+GKGGSII EMR+L+KA+I +L K+ +P
Sbjct: 464 VQRRITPPTANNKEGAAIS-RLIVSPNQVGCLLGKGGSIIAEMRKLSKAHIVVLSKDKIP 522
Query: 413 KIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF-DREGAV 453
K E DE+VQI+GD + ++AL+Q+ RLR +LF DR A+
Sbjct: 523 KGVQESDEVVQITGDSEAIQEALMQITARLRNHLFRDRMAAM 564
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 126/251 (50%), Gaps = 33/251 (13%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+ PE +R LC K+GSIIG+GG +K ++ DT +I+I ETVP SE+RV+ + +
Sbjct: 390 VPPEPLTFRLLCSSDKVGSIIGKGGNNIKTIQKDTGCEIKILETVPKSEDRVIVISGPA- 448
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
GD +SPAQ+A+ V R+ E + ++L+V +Q+GC++GK
Sbjct: 449 -----HPGDG-ISPAQNAILHVQRRITPPTANNKEGA-----AISRLIVSPNQVGCLLGK 497
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GG I+ +R + A I +L + +P SDE+VQI+G++ +++AL QI +RL +
Sbjct: 498 GGSIIAEMRKLSKAHIVVLSKDKIPKGVQESDEVVQITGDSEAIQEALMQITARLRN--- 554
Query: 218 RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDT-------AGDWSRS 270
HL + + +GP P + P G + G T A + +
Sbjct: 555 ---HLFRDRM--------AAMGPNMQPPFGSLDPQFGAFAGSHESTSPRIYPNASQFHKD 603
Query: 271 LYSAPRDDLSS 281
P D++ +
Sbjct: 604 FMGRPLDEMPA 614
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 25 KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPG 84
K ++T + +I P + R LCP K G++IG+GG I+ ++R + KIR+ E VPG
Sbjct: 27 KTKHTSSQQPPLVIQPGVPLIRILCPTEKCGNVIGKGGVIIAKIRQENGVKIRVDEAVPG 86
Query: 85 SEERVVTV-YSASDETNAFEDGDKFVSPA---QDALFKVHDRVIAEELRGDEDSDG 136
+ERV+ + + D+ + E G + V A DA + I EE E++ G
Sbjct: 87 CDERVIVITITEKDKEASREQGKQNVGGAAVSADAEHEKEKDHIKEENVDSENNHG 142
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
+R++CP G VIGKGG II +IRQE+G I+VD + D+ +I ++ E
Sbjct: 47 IRILCPTEKCGNVIGKGGVIIAKIRQENGVKIRVDEAVPGCDERVIVITITE 98
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR 187
++L P+++ G VIGKGG I+ IR E G +IR+ DE +P C R
Sbjct: 48 RILCPTEKCGNVIGKGGVIIAKIRQENGVKIRV--DEAVPGCDER 90
>gi|384253488|gb|EIE26963.1| hypothetical protein COCSUDRAFT_59455 [Coccomyxa subellipsoidea
C-169]
Length = 648
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 144/446 (32%), Positives = 228/446 (51%), Gaps = 56/446 (12%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
YR LCP +IG++IG+GG +++Q+R T ++I++ V G ER++++ S+SDE A
Sbjct: 33 YRLLCPATRIGTVIGKGGSVIQQMRDSTGARIKVEPEVAGCSERLISL-SSSDEPGAE-- 89
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
+ AQ+ALF V R ++E ED+ ++LV Q+GCV+GKGG+++ +
Sbjct: 90 ----LCRAQEALFAVQSR-LSEADAAQEDTC----CVVRMLVEQAQVGCVLGKGGEVISD 140
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS-QHLL 223
+R TGA IR+ LP+CA D LV + GEA V AL Q+++ L + R Q
Sbjct: 141 LRRRTGANIRVSDKRDLPACAGSEDSLVAVKGEAQAVSDALRQLSALLRTHSQRKPQQAR 200
Query: 224 ASAISNSHSSSGSLVGPTAAT--------PIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
A N + + + V P A P+ +AP+ P+ + + +A
Sbjct: 201 APMTFNITAVATAAVQPEQAQHRRQPMREPV--LAPIARPHQCHNCLPDAHAMQPRMTAV 258
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS----------SSTE 325
++ + E LRL+ P +IG VIG+ G +I IR ++GA IKV S +
Sbjct: 259 QEASAVVEVQLRLLVPATHIGCVIGRRGEMIRTIRDDTGAHIKVHEGSQGARAFPPSEKK 318
Query: 326 GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISF-TTRLLVPTS----- 379
G D +ITV++ E +S T EAV L C + SGL R+LVPT
Sbjct: 319 GVDRVITVAAAEAAGAAVSPTEEAVC-LMALC---LLGPSGLPPVPCIRILVPTPQGGTA 374
Query: 380 ------RIGCLIGKGGSIITEMRRLTKANIRILPKEN-----LPK--IASEDDEMVQISG 426
++G ++GKGG+ IT++R+ + A +R++P E LP+ A + ++VQI G
Sbjct: 375 EALSLLQVGGVLGKGGATITQVRKDSGAGVRLVPLEAEDDRWLPRDVAAGQMHKVVQIEG 434
Query: 427 DLDLAKDALIQVMTRLRANLFDREGA 452
+ A+ V +LRA +GA
Sbjct: 435 PITATVKAVRAVCAQLRAWQARSQGA 460
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 134 SDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
S G V +LL P+ +IG VIGKGG ++Q +R TGA+I++ P A S+ L+
Sbjct: 25 SAAGAMVEYRLLCPATRIGTVIGKGGSVIQQMRDSTGARIKV-----EPEVAGCSERLIS 79
Query: 194 IS------GEASVVKKALCQIASRLHD 214
+S E ++AL + SRL +
Sbjct: 80 LSSSDEPGAELCRAQEALFAVQSRLSE 106
>gi|224095794|ref|XP_002310483.1| predicted protein [Populus trichocarpa]
gi|222853386|gb|EEE90933.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 146/431 (33%), Positives = 240/431 (55%), Gaps = 33/431 (7%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFE 103
++R LC +IG IIG+GG I+K L+ T +KIRI + S +RV+T+ + +++
Sbjct: 59 LFRLLCHDSRIGGIIGKGGNIIKGLQQQTGAKIRIEDAPLESPDRVITIVGSVTQSSVVF 118
Query: 104 DGDKF---VSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
G VS Q+AL +V +R++ E+ + DS G V+ +LL +G VIGKGG+
Sbjct: 119 SGIGSAIEVSKGQEALVRVFERIL--EVAAESDSVAGGLVSCRLLAEISSVGAVIGKGGK 176
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD-NPSRS 219
V+ IR + G ++++L D+ LP+CA ++E+++I G+ S VKK L ++ RL D P
Sbjct: 177 TVEKIRKDCGCKVKVLIDK-LPACASSNEEMIEIEGDVSAVKKGLVAVSHRLQDCQPVDK 235
Query: 220 QHLLAS----AISN-SHSSSGSLVGP--TAATPIVGIAPLMGPYGGYKGDTAGDWSR--S 270
+++S A+S S G + P +A P + + P +++ D++
Sbjct: 236 TRVISSKPVEAVSRVSFPEVGVEILPQHSAVRPTIAQHSVAPPT---VTNSSIDYASGTH 292
Query: 271 LYSAPRDDLSS-------KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
L+S + +S+ ++ R++C +GGVIGKGG I+ ++ E+GA I +
Sbjct: 293 LFSLESERVSTLDTSTPQQQVVFRILCNNDRVGGVIGKGGNIVTALQNETGATISIGPKV 352
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK-IER--DSGLIS---FTTRLLVP 377
D+ LITV++ E E SA + VV + R E IE+ D G + RL+V
Sbjct: 353 AGCDERLITVTASENPESRYSAAQKTVVLVFSRVVESVIEKGLDPGSSEGSPVSVRLVVS 412
Query: 378 TSRIGCLIGKGGSIITEMRRLTKANIRILPKEN-LPKIASEDDEMVQISGDLDLAKDALI 436
+++GCL+GKGG+II+EMR+ T +IRI+ ++ PK E+D +V+I GD KD++
Sbjct: 413 PNQVGCLLGKGGTIISEMRKATSTSIRIIGRDQGNPKCVPENDHVVEILGDFLNVKDSIY 472
Query: 437 QVMTRLRANLF 447
+ RLR NLF
Sbjct: 473 HITGRLRDNLF 483
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 98/178 (55%), Gaps = 10/178 (5%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
+ V+R LC ++G +IG+GG IV L+ +T + I IG V G +ER++TV
Sbjct: 311 QQVVFRILCNNDRVGGVIGKGGNIVTALQNETGATISIGPKVAGCDERLITV-------T 363
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRG--DEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
A E+ + S AQ + V RV+ + D S G V+ +L+V +Q+GC++GKG
Sbjct: 364 ASENPESRYSAAQKTVVLVFSRVVESVIEKGLDPGSSEGSPVSVRLVVSPNQVGCLLGKG 423
Query: 159 GQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
G I+ +R T IRI+ +D+ P C +D +V+I G+ VK ++ I RL DN
Sbjct: 424 GTIISEMRKATSTSIRIIGRDQGNPKCVPENDHVVEILGDFLNVKDSIYHITGRLRDN 481
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 115/230 (50%), Gaps = 22/230 (9%)
Query: 232 SSSGSLVGPTAATPIV--GIAPLMGP--YGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLR 287
SS + P A P+ I P P GY + S +AP + S R
Sbjct: 3 SSFSPFLSPPAKRPVYYSTILPDPNPNSTNGYSANKRSKPHPSTSAAP-SPVPSGHVLFR 61
Query: 288 LVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV-----SSKEFFEDT 342
L+C + IGG+IGKGG II ++Q++GA I+++ + E D +IT+ S F
Sbjct: 62 LLCHDSRIGGIIGKGGNIIKGLQQQTGAKIRIEDAPLESPDRVITIVGSVTQSSVVFSGI 121
Query: 343 LSAT-----IEAVVRLQPRCSE-KIERDS---GLISFTTRLLVPTSRIGCLIGKGGSIIT 393
SA EA+VR+ R E E DS GL+S RLL S +G +IGKGG +
Sbjct: 122 GSAIEVSKGQEALVRVFERILEVAAESDSVAGGLVS--CRLLAEISSVGAVIGKGGKTVE 179
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
++R+ +++L + LP AS ++EM++I GD+ K L+ V RL+
Sbjct: 180 KIRKDCGCKVKVL-IDKLPACASSNEEMIEIEGDVSAVKKGLVAVSHRLQ 228
>gi|293332893|ref|NP_001169297.1| uncharacterized protein LOC100383161 [Zea mays]
gi|224028485|gb|ACN33318.1| unknown [Zea mays]
Length = 664
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 219/431 (50%), Gaps = 42/431 (9%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVV-TVYSASDETNA 101
T +R LCP K S V ++R D+ + + + G RV+ TV A E +
Sbjct: 85 TSFRILCPECKAYSF---SPGFVAKVRDDSGALVTVHPPFAGDYVRVIETVDGARREADG 141
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEEL-----------RGDEDSDGGHQVTAKLLVPSDQ 150
SPAQ+AL VH R++ + RG + D G + T +L+VP
Sbjct: 142 CP---PMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDARDRG-KTTTRLIVPKQH 197
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIA 209
+GC++GKGG+I++ +R ET IRIL + +H P C S+E+VQ+ G+ + VKKA+ I
Sbjct: 198 VGCLLGKGGKIIEQMRMETKTHIRILSRGQHTPRCVSSSEEVVQVVGDGNCVKKAVAIIT 257
Query: 210 SRLHDNPSRSQHLLASAISNSH---SSSGSLVGPTAATPIVGIAPLMGP----------Y 256
RL ++ R + +++ S +G P + L GP
Sbjct: 258 DRLKESLHRDRGPFRGRLNSPEPRISQEDEYLGGVQQMPAY-VESLGGPDQIRNNISMEP 316
Query: 257 GGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA 316
GY D+ G + P D+ ++ R++CP ++ I+ ++ + G
Sbjct: 317 PGYVFDSNGG---KVIEHP--DILYEDIIFRILCPNDKADSLVATRDGILEMLQTDVGVD 371
Query: 317 IKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLV 376
+++ +++ D+ ++ ++S+E + L EAV+ +Q + +I TTRLLV
Sbjct: 372 VRLSDITSDSDERVLIITSREGPDHELFPAQEAVLHIQTHIVDLGPDMDNII--TTRLLV 429
Query: 377 PTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALI 436
P S I C G+ GS+ ++++R T AN++ILP+E+LP A E DE++QI G++ A++ALI
Sbjct: 430 PASEIACFDGREGSL-SDIQRQTSANVQILPREDLPSCALESDELIQIVGEIKAARNALI 488
Query: 437 QVMTRLRANLF 447
QV T+LR+ L+
Sbjct: 489 QVTTKLRSFLY 499
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 143/306 (46%), Gaps = 47/306 (15%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
ED ++R LCP K S++ I++ L+ D +R+ + S+ERV+ + S
Sbjct: 337 EDIIFRILCPNDKADSLVATRDGILEMLQTDVGVDVRLSDITSDSDERVLIITSR----- 391
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D + PAQ+A+ + ++ D D + +T +LLVP+ +I C G+ G
Sbjct: 392 --EGPDHELFPAQEAVLHIQTHIV------DLGPDMDNIITTRLLVPASEIACFDGREGS 443
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
+ +I+ +T A ++IL E LPSCAL SDEL+QI GE + AL Q+ ++L R
Sbjct: 444 L-SDIQRQTSANVQILPREDLPSCALESDELIQIVGEIKAARNALIQVTTKLRSFLYRE- 501
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG---PYGGYK-----------GDTAGD 266
+ I + + + P A +P P G P G Y D+ G
Sbjct: 502 --MPDPIQVGNINLHGAISPVAGSP---RGPYQGNDIPMGAYHQASQLATSWHSKDSGGS 556
Query: 267 WSRSLY--SAPRDDL---SSKEF--------SLRLVCPVANIGGVIGKGGAIINQIRQES 313
S S S DD+ ++K F +L +V P + + + + G+ + QI + S
Sbjct: 557 ASGSFEQGSNINDDIRQSATKRFAVPLVTRSTLEIVIPNSAVASLTMRAGSKLAQISEIS 616
Query: 314 GAAIKV 319
GAA+ +
Sbjct: 617 GAAVTL 622
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 90/198 (45%), Gaps = 35/198 (17%)
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV---------------DSSST 324
S+ S R++CP + ++R +SGA + V D +
Sbjct: 81 STATTSFRILCPECK---AYSFSPGFVAKVRDDSGALVTVHPPFAGDYVRVIETVDGARR 137
Query: 325 EGDDC----------LITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRL 374
E D C L+ V + +T + + PR K RD G TTRL
Sbjct: 138 EADGCPPMFSPAQEALLMVHRRIL--ETDADDGDEDGEYGPRG--KDARDRG--KTTTRL 191
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPK-ENLPKIASEDDEMVQISGDLDLAKD 433
+VP +GCL+GKGG II +MR TK +IRIL + ++ P+ S +E+VQ+ GD + K
Sbjct: 192 IVPKQHVGCLLGKGGKIIEQMRMETKTHIRILSRGQHTPRCVSSSEEVVQVVGDGNCVKK 251
Query: 434 ALIQVMTRLRANLFDREG 451
A+ + RL+ +L G
Sbjct: 252 AVAIITDRLKESLHRDRG 269
>gi|413953982|gb|AFW86631.1| hypothetical protein ZEAMMB73_253509 [Zea mays]
Length = 581
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 213/422 (50%), Gaps = 29/422 (6%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVV-TVYSASDETNAFE 103
+R LCP K G V ++R D+ + + + G RV+ TV A E +
Sbjct: 91 FRILCPECKA---YGFPPGFVAKVRDDSGALVTVHPPFAGDYVRVIETVDGARREADGRP 147
Query: 104 DGDKFVSPAQDALFKVHDRVIAEEL-----------RGDEDSDGGHQVTAKLLVPSDQIG 152
SPAQ+AL VH R++ + RG + D G + T +L+VP +G
Sbjct: 148 ---PMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDSRDRG-KTTTRLIVPKMHVG 203
Query: 153 CVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIASR 211
C++GKGG+I++ +R ET IRIL +D+H P C S+E+VQ+ G+ + VKKA+ I R
Sbjct: 204 CLLGKGGKIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQVVGDGNCVKKAVAIITDR 263
Query: 212 LHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
L ++ R + +++ + + +G + +T+ +
Sbjct: 264 LKESLHRDRGPFRGRMNSPEPRISQEDDYLGVSQMPAYEESLGRSDQIRNNTSMEPPGYE 323
Query: 272 YSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE 325
+ + D+ + R++CP + ++ I+ ++ + G +++
Sbjct: 324 FDSNDGKVIEHPDILYDDIIFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAG 383
Query: 326 GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLI 385
D+ ++ ++S+E + L EAV+ +Q + +I TTRLLVP+S I C
Sbjct: 384 SDERVVIITSREGPDHELFPAQEAVLHIQTHIVDLGPDKDNII--TTRLLVPSSEIACFD 441
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRAN 445
G+ GS+ ++++R T AN++ILPKE+LP A E DE++QI G++ A++ALIQV T+LR+
Sbjct: 442 GREGSL-SDIQRQTSANVQILPKEDLPLCALESDELIQIVGEISAARNALIQVTTKLRSF 500
Query: 446 LF 447
L+
Sbjct: 501 LY 502
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 97/172 (56%), Gaps = 14/172 (8%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
+D ++R LCP K+ +++ I++ L+ D +R+ + + GS+ERVV + S
Sbjct: 340 DDIIFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAGSDERVVIITSR----- 394
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D + PAQ+A+ + ++ D D + +T +LLVPS +I C G+ G
Sbjct: 395 --EGPDHELFPAQEAVLHIQTHIV------DLGPDKDNIITTRLLVPSSEIACFDGREGS 446
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+ +I+ +T A ++IL E LP CAL SDEL+QI GE S + AL Q+ ++L
Sbjct: 447 L-SDIQRQTSANVQILPKEDLPLCALESDELIQIVGEISAARNALIQVTTKL 497
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 360 KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPK-ENLPKIASED 418
K RD G TTRL+VP +GCL+GKGG II +MR TK +IRILP+ ++ P+ S
Sbjct: 183 KDSRDRG--KTTTRLIVPKMHVGCLLGKGGKIIEQMRMETKTHIRILPRDQHTPRCVSLS 240
Query: 419 DEMVQISGDLDLAKDALIQVMTRLRANLFDREG 451
+E+VQ+ GD + K A+ + RL+ +L G
Sbjct: 241 EEVVQVVGDGNCVKKAVAIITDRLKESLHRDRG 273
>gi|413953981|gb|AFW86630.1| hypothetical protein ZEAMMB73_253509 [Zea mays]
Length = 667
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 213/422 (50%), Gaps = 29/422 (6%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVV-TVYSASDETNAFE 103
+R LCP K G V ++R D+ + + + G RV+ TV A E +
Sbjct: 91 FRILCPECKA---YGFPPGFVAKVRDDSGALVTVHPPFAGDYVRVIETVDGARREADGRP 147
Query: 104 DGDKFVSPAQDALFKVHDRVIAEEL-----------RGDEDSDGGHQVTAKLLVPSDQIG 152
SPAQ+AL VH R++ + RG + D G + T +L+VP +G
Sbjct: 148 ---PMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDSRDRG-KTTTRLIVPKMHVG 203
Query: 153 CVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIASR 211
C++GKGG+I++ +R ET IRIL +D+H P C S+E+VQ+ G+ + VKKA+ I R
Sbjct: 204 CLLGKGGKIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQVVGDGNCVKKAVAIITDR 263
Query: 212 LHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
L ++ R + +++ + + +G + +T+ +
Sbjct: 264 LKESLHRDRGPFRGRMNSPEPRISQEDDYLGVSQMPAYEESLGRSDQIRNNTSMEPPGYE 323
Query: 272 YSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE 325
+ + D+ + R++CP + ++ I+ ++ + G +++
Sbjct: 324 FDSNDGKVIEHPDILYDDIIFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAG 383
Query: 326 GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLI 385
D+ ++ ++S+E + L EAV+ +Q + +I TTRLLVP+S I C
Sbjct: 384 SDERVVIITSREGPDHELFPAQEAVLHIQTHIVDLGPDKDNII--TTRLLVPSSEIACFD 441
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRAN 445
G+ GS+ ++++R T AN++ILPKE+LP A E DE++QI G++ A++ALIQV T+LR+
Sbjct: 442 GREGSL-SDIQRQTSANVQILPKEDLPLCALESDELIQIVGEISAARNALIQVTTKLRSF 500
Query: 446 LF 447
L+
Sbjct: 501 LY 502
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 97/172 (56%), Gaps = 14/172 (8%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
+D ++R LCP K+ +++ I++ L+ D +R+ + + GS+ERVV + S
Sbjct: 340 DDIIFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAGSDERVVIITSR----- 394
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D + PAQ+A+ + ++ D D + +T +LLVPS +I C G+ G
Sbjct: 395 --EGPDHELFPAQEAVLHIQTHIV------DLGPDKDNIITTRLLVPSSEIACFDGREGS 446
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+ +I+ +T A ++IL E LP CAL SDEL+QI GE S + AL Q+ ++L
Sbjct: 447 L-SDIQRQTSANVQILPKEDLPLCALESDELIQIVGEISAARNALIQVTTKL 497
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 360 KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPK-ENLPKIASED 418
K RD G TTRL+VP +GCL+GKGG II +MR TK +IRILP+ ++ P+ S
Sbjct: 183 KDSRDRG--KTTTRLIVPKMHVGCLLGKGGKIIEQMRMETKTHIRILPRDQHTPRCVSLS 240
Query: 419 DEMVQISGDLDLAKDALIQVMTRLRANLFDREG 451
+E+VQ+ GD + K A+ + RL+ +L G
Sbjct: 241 EEVVQVVGDGNCVKKAVAIITDRLKESLHRDRG 273
>gi|357485457|ref|XP_003613016.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355514351|gb|AES95974.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 596
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 139/450 (30%), Positives = 225/450 (50%), Gaps = 31/450 (6%)
Query: 16 TDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSK 75
TD+ P +R R F + P +R +C +G +IG G IV QLR +T K
Sbjct: 13 TDHHHPQPPLKR-NNRKRPVFKLLPGQIAFRLVCHSSTVGGLIGSSGSIVSQLRRETGCK 71
Query: 76 IRIGETVPGSEERVVTVYSASDETNAFEDGDK--FVSPAQDALFKVHDRVIAEELRGDED 133
I + V G+++RV+ V + + GD+ VS AQ+ + +V DRV G E
Sbjct: 72 IHCEDAVVGTDDRVILVIGSMSDRKGIVLGDREMEVSNAQEGVVRVFDRV-----WGLES 126
Query: 134 SDGGH-QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
GG+ +V KLL S Q+G ++GKGG+ + NIR+ +G+ IR+ H CA + +EL+
Sbjct: 127 EKGGNGEVYGKLLAHSSQVGAIVGKGGKNISNIRNNSGSNIRVCPAPH---CAAKDEELI 183
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAIS-NSHSSSGSLVGPTAATPIVGIAP 251
I+GE+ VKKAL ++ L D P + L + + NS S S + P
Sbjct: 184 LITGESLAVKKALIYVSYCLQDCPPMGKVSLNTPPTINSSDRSTSYTHEDLFPHLNSWLP 243
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAP-RDDLSSK----EFSLRLVCPVANIGGVIGKGGAII 306
M +G + D S+ +A L SK RL+C G VIGK G+I+
Sbjct: 244 SM------EGLSINDASKQTTNANGNSSLDSKGSGHAVVFRLLCSNNVAGSVIGKKGSIV 297
Query: 307 NQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSG 366
+GA+I + ++ ++T+S+ E E + S +AV+ + R +E R+
Sbjct: 298 RTFEIRTGASIVFAPPLGQYEERIVTISAFENLESSNSPAQDAVILVFTRIAEDHIRNGF 357
Query: 367 LIS------FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE 420
+ T RLL+ TS + L G G +I+E+R+++ A+I++L E +P AS++D
Sbjct: 358 QPATAVESPVTARLLITTSTLHLLTGNEGQVISELRQVSGADIQLLHGEPIPN-ASDNDV 416
Query: 421 MVQISGDLDLAKDALIQVMTRLRANLFDRE 450
+VQI+G ++AL ++ + +R N E
Sbjct: 417 VVQITGGYRCVENALRKITSIIRDNPLTNE 446
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 149/313 (47%), Gaps = 25/313 (7%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFE 103
V+R LC GS+IG+ G IV+ I T + I + EER+VT+ +AFE
Sbjct: 276 VFRLLCSNNVAGSVIGKKGSIVRTFEIRTGASIVFAPPLGQYEERIVTI-------SAFE 328
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ--VTAKLLVPSDQIGCVIGKGGQI 161
+ + SPAQDA+ V R+ + +R + VTA+LL+ + + + G GQ+
Sbjct: 329 NLESSNSPAQDAVILVFTRIAEDHIRNGFQPATAVESPVTARLLITTSTLHLLTGNEGQV 388
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
+ +R +GA I++L E +P+ A +D +VQI+G V+ AL +I S + DNP ++
Sbjct: 389 ISELRQVSGADIQLLHGEPIPN-ASDNDVVVQITGGYRCVENALRKITSIIRDNPLTNEL 447
Query: 222 LLASAISNSHS------SSGSLVGPTAATPIVGIAPL-MGPYGGYKGDTAGDWSRSL--- 271
L + I S S + ++ P + P G Y K G+ +L
Sbjct: 448 LAEAKIKPSFPLNKDTVRSKFITRKKSSFPFARVPPQNAGVYQAKKVTENGESHTNLIEN 507
Query: 272 YSAPRDDL--SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV---DSSSTEG 326
R ++ + ++ ++ G V G+ G +++IRQ SGA + V S+ T G
Sbjct: 508 VEPGRGNIVATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGADVTVFDPSSTGTSG 567
Query: 327 DDCLITVSSKEFF 339
+I+ + + F
Sbjct: 568 GKVVISGTPDQTF 580
>gi|226530329|ref|NP_001151982.1| nucleic acid binding protein [Zea mays]
gi|195651499|gb|ACG45217.1| nucleic acid binding protein [Zea mays]
gi|224029689|gb|ACN33920.1| unknown [Zea mays]
gi|413947861|gb|AFW80510.1| nucleic acid binding protein [Zea mays]
Length = 705
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/361 (33%), Positives = 196/361 (54%), Gaps = 23/361 (6%)
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGD--EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ + A A+ V DR+ A E + S V+ ++LV Q G ++GKGG +V+
Sbjct: 197 ERVIPLALKAVSLVFDRIFATEGNNETGNASAASAPVSLRMLVLYSQAGWLLGKGGSVVK 256
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLL 223
+ ++ G +IR+LKD +LPSCAL +D+L QI+GE V+K L ++ L +P + +
Sbjct: 257 QMAADNGCEIRVLKD-NLPSCALLNDKLCQITGEIDSVRKGLNAVSEVLLAHPPKETDAV 315
Query: 224 ASAISNSHSSSGSLVGPTAATPIVGIA-----PLMGPYGGYKGD-TAGDWSRSLYSAPRD 277
A S+ SS P G+ PL GP G D ++
Sbjct: 316 ADVHSSGSSSRSLFSQPDGLP--SGMQSNFHIPLQGPPSQANGPFDIVDLQPPIHG--HA 371
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
++ + S R++CP +G +IGKGG I+ I+ ++G IKV + + DD +I++S
Sbjct: 372 SVAIESLSFRMLCPQDKVGSIIGKGGNIVKTIQNDTGCEIKVLDTVPKTDDRIISISGPA 431
Query: 338 FFEDTLSATIEAVVRLQPR----CSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
D +S A++ +Q + S+K E + T RL+V +++GC++GKGGSII
Sbjct: 432 HPSDGISPAQNAILHVQRKIMLPSSDKKEGPA-----TCRLIVSGNQVGCVLGKGGSIIA 486
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF-DREGA 452
EMR+L+ A I +L K+ +P+ E DE++QI+G + ++AL+QV RLR +LF DR A
Sbjct: 487 EMRKLSGAFIVVLSKDKIPRGVPEHDEVIQINGSCEAIQEALMQVTARLRNHLFRDRMPA 546
Query: 453 V 453
V
Sbjct: 547 V 547
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 162/354 (45%), Gaps = 74/354 (20%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E +R LCP K+GSIIG+GG IVK ++ DT +I++ +TVP +++R++++ + ++
Sbjct: 376 ESLSFRMLCPQDKVGSIIGKGGNIVKTIQNDTGCEIKVLDTVPKTDDRIISISGPAHPSD 435
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
+SPAQ+A+ V +++ L + +G T +L+V +Q+GCV+GKGG
Sbjct: 436 G-------ISPAQNAILHVQRKIM---LPSSDKKEG--PATCRLIVSGNQVGCVLGKGGS 483
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
I+ +R +GA I +L + +P DE++QI+G +++AL Q+ +RL +
Sbjct: 484 IIAEMRKLSGAFIVVLSKDKIPRGVPEHDEVIQINGSCEAIQEALMQVTARLRN------ 537
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDT---------------AG 265
HL + VGP P + P GP+ G + A
Sbjct: 538 HLFRDRMP--------AVGPNMRPPFGLLDPQFGPFSGNHESSSLFHKDFMGRPLDGIAA 589
Query: 266 DWS----RSL-------------------YSAP-----RDDLSSKEFSLRLVCPVANIGG 297
W+ R L + P +L+++ RLV PV
Sbjct: 590 PWTVKGMRDLSDPVSISDIPGAGHREAGGFPGPGQPSMMPNLTAEVLVPRLVIPV----- 644
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVV 351
+ G+ G +++IR+ S A I V + + D + +S + +EA V
Sbjct: 645 LCGEDGGCLDRIREFSEAKITVAEPTADAMDTAVLISGTPEQMHAARSLVEAFV 698
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 5/107 (4%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGP-NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIG 59
M + + +RS +DY G K ++ + QF I P ++R LCP K G++IG
Sbjct: 5 MTPSKRPFQRRS---SDYDGRGKWQKTKHPSPHKSQFKIEPGVPIFRILCPASKSGNVIG 61
Query: 60 RGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSAS-DETNAFEDG 105
+GG I+ ++R +T+ +IR+ PG +ERV+ + +A+ DE E G
Sbjct: 62 KGGAIIAKIRQETRMRIRVDRAAPGCDERVIFITAANKDEEAGSEQG 108
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 128/325 (39%), Gaps = 69/325 (21%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
++L P+ + G VIGKGG I+ IR ET +IR+ D P C R
Sbjct: 48 RILCPASKSGNVIGKGGAIIAKIRQETRMRIRV--DRAAPGCDER--------------- 90
Query: 203 KALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD 262
++ +N +GS G GG
Sbjct: 91 -------------------VIFITAANKDEEAGSEQGGEND-------------GGAAAS 118
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSL---RLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
T GD + D +SKE ++ C N G G I+ ++ G K
Sbjct: 119 TGGDHEKD------KDNNSKEQNVDPEENNCNEQNDDSEKGSGKEEIDGFEKDHGTEEKN 172
Query: 320 DS----SSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC------SEKIERDSGLIS 369
DS + E DD L+ +K E + ++AV + R +E +
Sbjct: 173 DSEKEHNKGEKDDPLVAKVTKLEPERVIPLALKAVSLVFDRIFATEGNNETGNASAASAP 232
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
+ R+LV S+ G L+GKGGS++ +M IR+L K+NLP A +D++ QI+G++D
Sbjct: 233 VSLRMLVLYSQAGWLLGKGGSVVKQMAADNGCEIRVL-KDNLPSCALLNDKLCQITGEID 291
Query: 430 LAKDALIQVMTRLRANLFDREGAVS 454
+ L V L A+ AV+
Sbjct: 292 SVRKGLNAVSEVLLAHPPKETDAVA 316
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFS---LRLVCPVANIGGVIGKGGAIINQIRQESGAAIK 318
D G W ++ + +P E R++CP + G VIGKGGAII +IRQE+ I+
Sbjct: 20 DGRGKWQKTKHPSPHKSQFKIEPGVPIFRILCPASKSGNVIGKGGAIIAKIRQETRMRIR 79
Query: 319 VDSSSTEGDDCLITVSS 335
VD ++ D+ +I +++
Sbjct: 80 VDRAAPGCDERVIFITA 96
>gi|242055819|ref|XP_002457055.1| hypothetical protein SORBIDRAFT_03g000560 [Sorghum bicolor]
gi|241929030|gb|EES02175.1| hypothetical protein SORBIDRAFT_03g000560 [Sorghum bicolor]
Length = 716
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 194/372 (52%), Gaps = 59/372 (15%)
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-----VTAKLLVPSDQIGCVIGKGGQ 160
++ + A A+ V DR+ A GD + G V+ +LLV Q G ++GKGG
Sbjct: 208 ERVIPSALKAISLVFDRIFAA---GDNNETGNASAASTPVSLRLLVLYSQAGWLLGKGGS 264
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP---- 216
+++ + ++ G +IR+L+D +LPSCAL +D+L QI+GE V+K L ++ L +P
Sbjct: 265 VIKQMSADNGCEIRVLRD-NLPSCALLNDKLCQITGEIDSVRKGLNAVSELLLAHPPKET 323
Query: 217 -----------------SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
++S L + SN H L GP+ A I L P G+
Sbjct: 324 DAVSGVHSSGSSSRSLFNQSDGLPSGMQSNFHIP---LQGPSQANGPFDIIDLQPPIHGH 380
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S P + LS R++CP +G +IGKGG I+ I++++G IKV
Sbjct: 381 ------------ASVPIESLS-----FRMLCPQDKVGSIIGKGGNIVKTIQKDTGCEIKV 423
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPR----CSEKIERDSGLISFTTRLL 375
+ + +D +I++S D +S A++ +Q + S+K E + RL+
Sbjct: 424 LDTVPKSEDRIISISGPAHPSDGISPAQNAILHVQRKIMLPTSDKKEGPA-----ICRLI 478
Query: 376 VPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDAL 435
V +++GC++GKGGSII EMR+L+ A I +L K+ +P+ E DE+VQISG + ++AL
Sbjct: 479 VSANQVGCVLGKGGSIIAEMRKLSGAFIIVLSKDKIPRGVPEHDEVVQISGSCEAIQEAL 538
Query: 436 IQVMTRLRANLF 447
+Q+ RLR +LF
Sbjct: 539 MQITARLRNHLF 550
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 128/241 (53%), Gaps = 26/241 (10%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E +R LCP K+GSIIG+GG IVK ++ DT +I++ +TVP SE+R++++ + ++
Sbjct: 386 ESLSFRMLCPQDKVGSIIGKGGNIVKTIQKDTGCEIKVLDTVPKSEDRIISISGPAHPSD 445
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
+SPAQ+A+ V +++ L + +G +L+V ++Q+GCV+GKGG
Sbjct: 446 G-------ISPAQNAILHVQRKIM---LPTSDKKEG--PAICRLIVSANQVGCVLGKGGS 493
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
I+ +R +GA I +L + +P DE+VQISG +++AL QI +RL ++ R
Sbjct: 494 IIAEMRKLSGAFIIVLSKDKIPRGVPEHDEVVQISGSCEAIQEALMQITARLRNHLFRVD 553
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS 280
+ A +GP P + GP+ G ++ + + P D +S
Sbjct: 554 RMPA-------------MGPNMRPPFGLLDSQFGPFAGNH-ESPSLFHKDFMGRPLDGIS 599
Query: 281 S 281
+
Sbjct: 600 A 600
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 74/143 (51%), Gaps = 11/143 (7%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGP-NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIG 59
M + + K S +DY G K +++ + QF I P +R LCP K G++IG
Sbjct: 5 MTPSKRPFQKNS---SDYNGRGKWQKTKHSSPHKSQFKIEPGVPFFRILCPASKSGNVIG 61
Query: 60 RGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSA-SDETNAFEDG---DKFVSPAQDA 115
+GG I+ ++R +T+ +IR+ PG +ERV+ + + DE + E G D+ V+ + A
Sbjct: 62 KGGAIIAKIREETRMRIRVDRAAPGCDERVIFITAVDKDEEASSERGVENDRGVAASTGA 121
Query: 116 LFKVHDRVIAEELRGDEDSDGGH 138
HDR G++D +G +
Sbjct: 122 ---GHDRDGDNSKEGNDDPEGNN 141
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 265 GDWSRSLYSAPRDDLSSKEFS---LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
G W ++ +S+P E R++CP + G VIGKGGAII +IR+E+ I+VD
Sbjct: 23 GKWQKTKHSSPHKSQFKIEPGVPFFRILCPASKSGNVIGKGGAIIAKIREETRMRIRVDR 82
Query: 322 SSTEGDDCLITVSS 335
++ D+ +I +++
Sbjct: 83 AAPGCDERVIFITA 96
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR 187
++L P+ + G VIGKGG I+ IR ET +IR+ D P C R
Sbjct: 48 RILCPASKSGNVIGKGGAIIAKIREETRMRIRV--DRAAPGCDER 90
>gi|224097168|ref|XP_002310861.1| predicted protein [Populus trichocarpa]
gi|222853764|gb|EEE91311.1| predicted protein [Populus trichocarpa]
Length = 404
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/400 (32%), Positives = 203/400 (50%), Gaps = 35/400 (8%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVY-SASDE 98
P +R +C KIG++IG G ++ Q+R++T + E V GSE R + V SAS E
Sbjct: 23 PGQVAFRVVCHASKIGALIGHSGSVISQIRLETGCLVHCEEAVKGSEHRAIVVAGSASPE 82
Query: 99 TNAF--EDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH-QVTAKLLVPSDQIGCVI 155
ED VS AQ+A+ +V +R+ D DGG + LL + QIG V+
Sbjct: 83 RKIAVGEDETVEVSAAQEAVVRVLERM----WEVDAVKDGGDCEGYCGLLANTSQIGAVV 138
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV-VKKALCQIASRLHD 214
G+ G+ ++ ++ +GA I IL P CAL+ D+L+QI+G ++V VKKA+ I S L D
Sbjct: 139 GREGRNIKRMKRASGAHIWILPA---PLCALKEDQLIQITGSSTVAVKKAVIAITSCLQD 195
Query: 215 NPSRSQH---LLASAISNSHSSSGSLVGPTAATPIVGIAP-LMGPYGGYKGDTAGDWSRS 270
P + L A+ S S + P P L Y + A D
Sbjct: 196 CPPYEKDEVDLSLEAVRRRRSGS-------SGDPHAEFFPHLCSLLPTYSENIATDKD-- 246
Query: 271 LYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCL 330
+ P + L + R++CP G +IGKGG+++ ++ ++GA+I + T D L
Sbjct: 247 -HKKPNEQL---QVQFRMICPHGAAGSIIGKGGSVVRALQNQTGASIILAPPITNSDGRL 302
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEK-IERDSGL-----ISFTTRLLVPTSRIGCL 384
+TVS+ E E + S A++ + R E IER L I+ T LL+P++R+ CL
Sbjct: 303 VTVSALENLESSHSPAQNALLLVFARSIEHDIERARSLGLIEEITVTATLLLPSNRVSCL 362
Query: 385 IGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQI 424
I +GG I +EM T A+I+IL + AS +D ++Q+
Sbjct: 363 IERGGRIDSEMIETTGADIQILQGDQFFYCASNNDVVLQV 402
>gi|294462548|gb|ADE76820.1| unknown [Picea sitchensis]
Length = 340
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/149 (55%), Positives = 116/149 (77%), Gaps = 5/149 (3%)
Query: 307 NQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI--ERD 364
NQIRQE+GA IKV + D+ +I VSSKEF +D +S T+EAV+ LQ + SEK E
Sbjct: 20 NQIRQETGANIKVIDQVPDCDERVIVVSSKEFVDDRISPTLEAVLHLQFKTSEKSIEEGK 79
Query: 365 SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQI 424
G+I TTR LVP++ IGCL+GKGGSII+EMR+ T+ANIRI+ K+N+PK A E++E+VQ+
Sbjct: 80 EGVI--TTRFLVPSNSIGCLLGKGGSIISEMRKRTRANIRIMSKDNIPKCAGENEELVQV 137
Query: 425 SGDLDLAKDALIQVMTRLRANLF-DREGA 452
G++D+A++ALIQ+ TRLR+N+F D++G
Sbjct: 138 IGEVDVAREALIQIATRLRSNVFKDQDGG 166
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 152/316 (48%), Gaps = 71/316 (22%)
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL----FKVHD 121
Q+R +T + I++ + VP +ERV+ V S E D +SP +A+ FK +
Sbjct: 20 NQIRQETGANIKVIDQVPDCDERVIVVSSK-------EFVDDRISPTLEAVLHLQFKTSE 72
Query: 122 RVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL 181
+ I E G +T + LVPS+ IGC++GKGG I+ +R T A IRI+ +++
Sbjct: 73 KSIEEGKEG--------VITTRFLVPSNSIGCLLGKGGSIISEMRKRTRANIRIMSKDNI 124
Query: 182 PSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPT 241
P CA ++ELVQ+ GE V ++AL QIA+RL N + Q + S++GS+V P+
Sbjct: 125 PKCAGENEELVQVIGEVDVAREALIQIATRLRSNVFKDQ--------DGGSNAGSVVPPS 176
Query: 242 AATPIVGIAPLMG----------------PYGGYKGDTAGDWSRSLYS------------ 273
+ G+ P G P G +G +G +S + Y
Sbjct: 177 LSLYGRGV-PDSGFGRGDELGSTGRMYSLPSLGLEGTASGRYSSASYGSLGGVQNGGAGG 235
Query: 274 -----------APRDDL----SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIK 318
AP L + ++ + P ++G ++G+GG+ I+QIR+ SGA +K
Sbjct: 236 YGSFSSFSTSRAPAGGLPAGVAKSGSTVEVTIPNKSVGSILGRGGSNISQIREISGAKVK 295
Query: 319 VDSSSTEGDDCLITVS 334
+ S G D ++ +S
Sbjct: 296 LHESKPGGTDRVVEIS 311
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 36/54 (66%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFE 103
P + +GSI+GRGG + Q+R + +K+++ E+ PG +RVV + ++T+A +
Sbjct: 268 PNKSVGSILGRGGSNISQIREISGAKVKLHESKPGGTDRVVEISGTPEQTHAAQ 321
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 23/107 (21%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI--GETVP---GSEERVVTVYSASDETN 100
R+L P IG ++G+GG I+ ++R T++ IRI + +P G E +V V D
Sbjct: 86 RFLVPSNSIGCLLGKGGSIISEMRKRTRANIRIMSKDNIPKCAGENEELVQVIGEVD--- 142
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
A++AL ++ R+ + + D DGG A +VP
Sbjct: 143 ----------VAREALIQIATRLRSNVFK---DQDGGSN--AGSVVP 174
>gi|224116392|ref|XP_002317286.1| predicted protein [Populus trichocarpa]
gi|222860351|gb|EEE97898.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 121/363 (33%), Positives = 187/363 (51%), Gaps = 41/363 (11%)
Query: 9 GKRSHSQTDYADHGPNKRRYT---GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
GKRS Q DY N++R+ G + D I VYR LCP IGS+IG+ G+++
Sbjct: 5 GKRSRPQRDYDGDTNNQKRHKDDKGTNNDGLI------VYRILCPDGVIGSVIGKSGKVI 58
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKF-----VSPAQDALFKVH 120
+R ++++++++ + PG+++R++T+Y E + D F + AQDAL KVH
Sbjct: 59 NSIRHESRARVKVVDPFPGAKDRIITIYCHIKEKEDVDVDDDFNHTNPLCAAQDALLKVH 118
Query: 121 DRVI-AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KD 178
+ A GD D + ++LVP+ Q +IGK G ++ +RS+T I+I+ KD
Sbjct: 119 AAISNAVASLGDSDKRLRDKEECQILVPASQSANIIGKAGATIKRLRSKTRTSIKIIAKD 178
Query: 179 EHLP--SCALRSDELVQISGEASVVKKALCQIASRLHD-NPSRSQHLLASAISNSHSSSG 235
P SCA+ D + I+GE+ VKKAL +++ ++ NP L A+ S
Sbjct: 179 STDPTHSCAMDFDNFLLITGESEAVKKALFAVSAIMYKFNPKEEIPLEATVPEPPPSIII 238
Query: 236 SLVGPTA--------ATPIVG---IAPLMGP-----YGGYKGDTAGDW---SRSLYSAPR 276
P A PIV + P++G GY GD W + +L P
Sbjct: 239 PSDVPIYQPGGFYPNAEPIVSSRSVPPILGATHIPELQGY-GDMGSSWPVYTSTLPVVPS 297
Query: 277 DDLSSK--EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
S+ E +R++CP IG VIGKGG+ I IRQ SGA I+VD + + D+C+ITV+
Sbjct: 298 FGNVSRYEELIIRVLCPFDKIGRVIGKGGSTIKSIRQASGARIEVDDTKADRDECIITVT 357
Query: 335 SKE 337
+ E
Sbjct: 358 ATE 360
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 29/207 (14%)
Query: 255 PYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSL---RLVCPVANIGGVIGKGGAIINQIRQ 311
P Y GDT +DD + L R++CP IG VIGK G +IN IR
Sbjct: 10 PQRDYDGDTNNQKRH------KDDKGTNNDGLIVYRILCPDGVIGSVIGKSGKVINSIRH 63
Query: 312 ESGAAIKVDSSSTEGDDCLITV----------SSKEFFEDT--LSATIEAVVRLQPRCSE 359
ES A +KV D +IT+ + F T L A +A++++ S
Sbjct: 64 ESRARVKVVDPFPGAKDRIITIYCHIKEKEDVDVDDDFNHTNPLCAAQDALLKVHAAISN 123
Query: 360 KI----ERDSGLI-SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLP-- 412
+ + D L ++LVP S+ +IGK G+ I +R T+ +I+I+ K++
Sbjct: 124 AVASLGDSDKRLRDKEECQILVPASQSANIIGKAGATIKRLRSKTRTSIKIIAKDSTDPT 183
Query: 413 -KIASEDDEMVQISGDLDLAKDALIQV 438
A + D + I+G+ + K AL V
Sbjct: 184 HSCAMDFDNFLLITGESEAVKKALFAV 210
>gi|222618061|gb|EEE54193.1| hypothetical protein OsJ_01028 [Oryza sativa Japonica Group]
Length = 748
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/355 (33%), Positives = 191/355 (53%), Gaps = 15/355 (4%)
Query: 112 AQDALFKVHDRVIAEELR---GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSE 168
A A+ V DR+ E+ GD + H V+ +LLV Q+G ++GK G +++ + ++
Sbjct: 245 AVKAILLVFDRIFVNEMENGTGDASGERNH-VSLRLLVLDSQVGWLLGKNGSVIKQMSTD 303
Query: 169 TGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAIS 228
+ +IR+ KD+ LP CAL DEL QI+GE V+K L +A L +P + +L +
Sbjct: 304 SCCEIRVSKDK-LPLCALPRDELCQITGELDSVRKGLNTVAQLLFTHPPKESDVLGA--H 360
Query: 229 NSHSSSGSLVGPTAATPIVGIAP-LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLR 287
NS SS P P G+ P L P+ G ++ +L + + + R
Sbjct: 361 NSGSSRSFFNQPDVLPP--GMQPNLHLPFQGPNVAHLPNFPEALMHG-HGSVPPEPLTFR 417
Query: 288 LVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATI 347
L+C +GG+IGKGG I I+ ++G IKV + + +D ++ +S D +S
Sbjct: 418 LLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGDGISPAQ 477
Query: 348 EAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILP 407
A++ +Q + G RL+V +++GCL+GKGGSII EMR+L+ A+I +L
Sbjct: 478 NAILHVQRKIVPTSNTKEG--PAICRLIVSPNQVGCLLGKGGSIIAEMRKLSGAHIIVLS 535
Query: 408 KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF-DREGA-VSTFVPVF 460
K+ +PK E+DE+VQISG + ++AL+Q+ RLR +LF DR + V P F
Sbjct: 536 KDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLFRDRMASTVPNVQPPF 590
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 116/203 (57%), Gaps = 16/203 (7%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+ PE +R LC K+G IIG+GG +K ++ DT +I++ +TVP SE+R+V + +
Sbjct: 409 VPPEPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAH 468
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
+ +SPAQ+A+ V +++ ++ G + +L+V +Q+GC++GK
Sbjct: 469 PGDG-------ISPAQNAILHVQRKIVPT-----SNTKEGPAI-CRLIVSPNQVGCLLGK 515
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GG I+ +R +GA I +L + +P +DE+VQISG + +++AL QI +RL ++
Sbjct: 516 GGSIIAEMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLF 575
Query: 218 RSQHLLASAISNSHSSSGSLVGP 240
R + +AS + N G LV P
Sbjct: 576 RDR--MASTVPNVQPPFG-LVDP 595
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 5 RNSYGKRSHSQTDYADHGPNKRRYTGDD---RDQFIIGPEDTVYRYLCPIRKIGSIIGRG 61
R++ KR + +G K + T + + Q I+ P ++R LCP K G++IG+G
Sbjct: 47 RSTPSKRPFQKNSSEQNGRGKWQKTKHNSLQQPQLIVQPGVPIFRILCPTSKSGNVIGKG 106
Query: 62 GEIVKQLRIDTKSKIRIGETVPGSEERVVTVYS 94
G I+ ++R +T KIR+ E VPG +ERV+ + +
Sbjct: 107 GGIIAKIRQETGVKIRVDEVVPGCDERVIVITA 139
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 265 GDWSRSLYSA---PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
G W ++ +++ P+ + R++CP + G VIGKGG II +IRQE+G I+VD
Sbjct: 66 GKWQKTKHNSLQQPQLIVQPGVPIFRILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDE 125
Query: 322 SSTEGDDCLITVSS 335
D+ +I +++
Sbjct: 126 VVPGCDERVIVITA 139
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR 187
++L P+ + G VIGKGG I+ IR ETG +IR+ DE +P C R
Sbjct: 91 RILCPTSKSGNVIGKGGGIIAKIRQETGVKIRV--DEVVPGCDER 133
>gi|297806983|ref|XP_002871375.1| hypothetical protein ARALYDRAFT_325507 [Arabidopsis lyrata subsp.
lyrata]
gi|297317212|gb|EFH47634.1| hypothetical protein ARALYDRAFT_325507 [Arabidopsis lyrata subsp.
lyrata]
Length = 525
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 139/455 (30%), Positives = 230/455 (50%), Gaps = 55/455 (12%)
Query: 40 PEDTV-YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
PE V +R L + ++G +IG+ G +++QL+ T S+I + + S RV+T+ +
Sbjct: 20 PEGYVLFRILGHVSQVGDVIGKDGRVIRQLKESTNSQIWVEKAPLDSLYRVITIIADVGS 79
Query: 99 TNAFEDG-----------------DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVT 141
T+ + G + VS AQ AL +V + A +R S V+
Sbjct: 80 TSRVKLGVIVNNASNRKKEEVQEQEVEVSRAQGALIRVFE---ALNVRFGTSST----VS 132
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVV 201
++LL+ + + VIGKGG++++ IR ETG + I + +LPSCA D +V+I G V
Sbjct: 133 SRLLMEACHVVTVIGKGGELMEMIRKETGCNVEICQ-YNLPSCADPDDVMVKIEGNVFAV 191
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
KK L I+SRL S + + + N H+ ++V P A L ++G
Sbjct: 192 KKVLVSISSRLQACQSIFKKKM---VGNPHNMQTNVV-PREA--------LYRASNVFQG 239
Query: 262 DTAG--------DWSRSLY---SAPRDDL--SSKEFSLRLVCPVANIGGVIGKGGAIINQ 308
D + D SL+ S PR D + ++ L+++C IG VIG G A I
Sbjct: 240 DISVSRLKHRELDPLESLHRNLSQPRKDSEDNKQQVVLKILCSKERIGRVIGNGRATIRD 299
Query: 309 IRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIER---DS 365
++ E+GA I + S+ + D+ L T+++ E S + A+V + + E DS
Sbjct: 300 LQSETGAFITLGSNRLDCDEGLFTITASEDPNAKNSPSQRALVLVFSKMYENTTAKVLDS 359
Query: 366 GLIS-FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQI 424
GL S T RL+V +++I CL+G+ G I + +++ T A I +L E PK SE++++VQI
Sbjct: 360 GLTSSITARLVVRSNQINCLMGEEGHIKSTIQQRTGAFITVLNVEQNPKCVSENNQIVQI 419
Query: 425 SGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPV 459
SG K+A+ QV + LR +L ++ + + PV
Sbjct: 420 SGAFPNVKEAINQVTSMLREDLINQSFQMGSHFPV 454
>gi|294464716|gb|ADE77865.1| unknown [Picea sitchensis]
Length = 348
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 117/179 (65%), Gaps = 2/179 (1%)
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
S +E R++CP IG VIG+ G+II ++ + GA IK+ + D+ +I +S+ E
Sbjct: 17 FSGEELVFRILCPNKKIGSVIGRAGSIIKSLQDDIGAKIKITDAVPGSDERIIIISANEV 76
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
ED LS EA++ +Q + + G+I TT+LL+P+++ GCL+GKGG+II+EMR+
Sbjct: 77 LEDNLSPAQEALLHIQSQIVDLGPDKDGVI--TTKLLIPSNQTGCLLGKGGAIISEMRKQ 134
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFV 457
T+ANIRILP+E+LP A + DEMVQI GD+ A+ AL+QV +RLR+ + G F+
Sbjct: 135 TRANIRILPREDLPPCALDSDEMVQIVGDIRAARAALVQVTSRLRSFIHREIGISGPFL 193
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 117/190 (61%), Gaps = 14/190 (7%)
Query: 23 PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
P Y D + G E+ V+R LCP +KIGS+IGR G I+K L+ D +KI+I + V
Sbjct: 3 PEVVEYHARDYEPSFSG-EELVFRILCPNKKIGSVIGRAGSIIKSLQDDIGAKIKITDAV 61
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
PGS+ER++ + + ED +SPAQ+AL + +++ +L D+D +T
Sbjct: 62 PGSDERIIIISA----NEVLEDN---LSPAQEALLHIQSQIV--DLGPDKDG----VITT 108
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
KLL+PS+Q GC++GKGG I+ +R +T A IRIL E LP CAL SDE+VQI G+ +
Sbjct: 109 KLLIPSNQTGCLLGKGGAIISEMRKQTRANIRILPREDLPPCALDSDEMVQIVGDIRAAR 168
Query: 203 KALCQIASRL 212
AL Q+ SRL
Sbjct: 169 AALVQVTSRL 178
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 60/197 (30%)
Query: 123 VIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLP 182
V+ R E S G ++ ++L P+ +IG VIG+ G I+++++ + GA+I+I + +P
Sbjct: 5 VVEYHARDYEPSFSGEELVFRILCPNKKIGSVIGRAGSIIKSLQDDIGAKIKI--TDAVP 62
Query: 183 SCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTA 242
SDE + I V L DN S +Q L S
Sbjct: 63 G----SDERIIIISANEV-----------LEDNLSPAQEALLHIQSQ------------- 94
Query: 243 ATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKG 302
IV + P D G + L + P G ++GKG
Sbjct: 95 ---IVDLGP----------DKDGVITTKL-----------------LIPSNQTGCLLGKG 124
Query: 303 GAIINQIRQESGAAIKV 319
GAII+++R+++ A I++
Sbjct: 125 GAIISEMRKQTRANIRI 141
>gi|218187831|gb|EEC70258.1| hypothetical protein OsI_01061 [Oryza sativa Indica Group]
Length = 722
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/354 (33%), Positives = 186/354 (52%), Gaps = 39/354 (11%)
Query: 112 AQDALFKVHDRVIAEELR---GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSE 168
A A+ V DR+ E+ GD + H V+ +LLV Q+G ++GK G +++ + ++
Sbjct: 245 AVKAILLVFDRIFVNEMENGTGDASGERNH-VSLRLLVLDSQVGWLLGKNGSVIKQMSTD 303
Query: 169 TGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAIS 228
+ +IR+ KD+ LP CAL DEL QI+GE V+K L +A L +P + +L +
Sbjct: 304 SCCEIRVSKDK-LPLCALPRDELCQITGELDSVRKGLNTVAQLLFTHPPKESDVLGA--- 359
Query: 229 NSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRL 288
H+S GP A LM +G S P + L+ RL
Sbjct: 360 --HNS-----GPNVAHLPNFPEALMHGHG---------------SVPPEPLT-----FRL 392
Query: 289 VCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIE 348
+C +GG+IGKGG I I+ ++G IKV + + +D ++ +S D +S
Sbjct: 393 LCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGDGISPAQN 452
Query: 349 AVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPK 408
A++ +Q + G RL+V +++GCL+GKGGSII EMR+L+ A+I +L K
Sbjct: 453 AILHVQRKIVPTSNTKEG--PAICRLIVSPNQVGCLLGKGGSIIAEMRKLSGAHIIVLSK 510
Query: 409 ENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF-DREGA-VSTFVPVF 460
+ +PK E+DE+VQISG + ++AL+Q+ RLR +LF DR + V P F
Sbjct: 511 DKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLFRDRMASTVPNVQPPF 564
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 116/203 (57%), Gaps = 16/203 (7%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+ PE +R LC K+G IIG+GG +K ++ DT +I++ +TVP SE+R+V + +
Sbjct: 383 VPPEPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAH 442
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
+ +SPAQ+A+ V +++ ++ G + +L+V +Q+GC++GK
Sbjct: 443 PGDG-------ISPAQNAILHVQRKIVPT-----SNTKEGPAI-CRLIVSPNQVGCLLGK 489
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GG I+ +R +GA I +L + +P +DE+VQISG + +++AL QI +RL ++
Sbjct: 490 GGSIIAEMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLF 549
Query: 218 RSQHLLASAISNSHSSSGSLVGP 240
R + +AS + N G LV P
Sbjct: 550 RDR--MASTVPNVQPPFG-LVDP 569
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 5 RNSYGKRSHSQTDYADHGPNKRRYTGDD---RDQFIIGPEDTVYRYLCPIRKIGSIIGRG 61
R++ KR + +G K + T + + Q I+ P ++R LCP K G++IG+G
Sbjct: 47 RSTPSKRPFQKNSSEQNGRGKWQKTKHNSLQQPQLIVQPGVPIFRILCPTSKSGNVIGKG 106
Query: 62 GEIVKQLRIDTKSKIRIGETVPGSEERVVTVYS 94
G I+ ++R +T KIR+ E VPG +ERV+ + +
Sbjct: 107 GGIIAKIRQETGVKIRVDEVVPGCDERVIVITA 139
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 265 GDWSRSLYSA---PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
G W ++ +++ P+ + R++CP + G VIGKGG II +IRQE+G I+VD
Sbjct: 66 GKWQKTKHNSLQQPQLIVQPGVPIFRILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDE 125
Query: 322 SSTEGDDCLITVSS 335
D+ +I +++
Sbjct: 126 VVPGCDERVIVITA 139
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR 187
++L P+ + G VIGKGG I+ IR ETG +IR+ DE +P C R
Sbjct: 91 RILCPTSKSGNVIGKGGGIIAKIRQETGVKIRV--DEVVPGCDER 133
>gi|297740744|emb|CBI30926.3| unnamed protein product [Vitis vinifera]
Length = 435
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/291 (34%), Positives = 162/291 (55%), Gaps = 37/291 (12%)
Query: 186 LRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS--------------- 230
+ D V I+G++ VKKAL I++ ++ R + L + + +
Sbjct: 1 MEFDNFVLIAGDSEAVKKALFAISAIMYKFTPREEIPLDTTVPEAPPSIIIPSDVPIYPA 60
Query: 231 ---HSSSGSLVGPTAATPIVGIAPLMGPYGGYK--GDTAGDWSRSL-----YSAPRDDLS 280
+ S+ S+V + P++ A + GY G T +S +L Y A R
Sbjct: 61 GGFYPSADSIVSARSVPPVLA-ATHVPELQGYSDMGSTWPVYSSNLPVVSGYGASR---- 115
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S+E +R++CP IG VIG+GG+ I +R+ SGA ++VD + + D+CLITV+S E +
Sbjct: 116 SEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVD 175
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
D S +EAV+ LQ + ++ E D + RLLVP+ IGC+IGK GSII E+R+ T+
Sbjct: 176 DLKSMAVEAVLLLQAKIND--EDDD---TVAIRLLVPSKIIGCIIGKSGSIINEIRKRTR 230
Query: 401 ANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRAN-LFDRE 450
A++RI K PK A +DE++++ G++ +DAL+Q++ RLR + L DR+
Sbjct: 231 ADVRI-SKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKDRD 280
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 153/339 (45%), Gaps = 51/339 (15%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+ + R LCP KIG +IGRGG +K +R + + + + +T +E ++TV S
Sbjct: 117 EELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTST----- 171
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D S A +A+ + ++ DED D V +LLVPS IGC+IGK G
Sbjct: 172 --ESVDDLKSMAVEAVLLLQAKI------NDEDDD---TVAIRLLVPSKIIGCIIGKSGS 220
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
I+ IR T A +RI K E P CA +DEL+++ GE V+ AL QI RL D+ + +
Sbjct: 221 IINEIRKRTRADVRISKSER-PKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKDR 279
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDW------------- 267
N+ + + SL A + + P P D +
Sbjct: 280 D----TGHNTSAGTDSLYSGGAGLSVSSVLPSAPPVAPLSYDQRAETGSGLGLLSSSSLY 335
Query: 268 -------------SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
S S YS+ + +V P +G V+GKGGA I IR+ SG
Sbjct: 336 GYGSLSVGENAYGSMSSYSSKLYGGLPTPSTFDMVIPANAVGKVMGKGGANIANIRKISG 395
Query: 315 AAIKV-DSSSTEGDDCLI---TVSSKEFFEDTLSATIEA 349
A I++ DS S+ GD + T K E+ + A I A
Sbjct: 396 AVIEISDSKSSRGDRVALISGTPEQKRTAENLIQAFIMA 434
>gi|115475229|ref|NP_001061211.1| Os08g0200400 [Oryza sativa Japonica Group]
gi|38636959|dbj|BAD03220.1| putative KH domain protein [Oryza sativa Japonica Group]
gi|113623180|dbj|BAF23125.1| Os08g0200400 [Oryza sativa Japonica Group]
gi|215695475|dbj|BAG90642.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 441
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/285 (36%), Positives = 154/285 (54%), Gaps = 35/285 (12%)
Query: 189 DELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSS-----------SGSL 237
D VQI+G+A V+KAL +++ ++ PS+ L +++S+ S S +
Sbjct: 4 DNFVQITGDARAVRKALFAVSTIIYKCPSKETIPLETSVSDLPPSIIVPSELPVYPSSNF 63
Query: 238 VGPTAATPIVGIAPL--MG--PYGGYKGDTAGDWSR-----------SLYSAPRDDLSSK 282
P+ A G L +G P+ +A SR Y+ P+ S
Sbjct: 64 YSPSDAAISSGHPSLSILGSTPHVPELTVSADAHSRLPIYQSVLPVIPAYNTPK---CSG 120
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E LR++CP IG VIGKGG I IR+ESGA I VD S + ++ +IT++S E +D
Sbjct: 121 ELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSNEATDDA 180
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKAN 402
SA +EAV+ LQ + ++ E L RLLVP IGCLIGKGGSI+ +MR TKA
Sbjct: 181 KSAAVEAVLLLQSKINDDNEGKMNL-----RLLVPGKVIGCLIGKGGSIVNDMRSKTKAA 235
Query: 403 IRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
I I E P+ AS DE+V++ G+++ +DAL+Q++ RLR ++
Sbjct: 236 IYISKGEK-PRKASSSDELVEVFGEVENLRDALVQIVLRLRDDVL 279
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 159/343 (46%), Gaps = 62/343 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
+ V R LCP KIG +IG+GG +K +R ++ ++I + ++ EE ++T+ S
Sbjct: 121 ELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSN------ 174
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
E D S A +A+ + ++ ++D++G ++ +LLVP IGC+IGKGG I
Sbjct: 175 -EATDDAKSAAVEAVLLLQSKI-------NDDNEG--KMNLRLLVPGKVIGCLIGKGGSI 224
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V ++RS+T A I I K E P A SDELV++ GE ++ AL QI RL D+
Sbjct: 225 VNDMRSKTKAAIYISKGEK-PRKASSSDELVEVFGEVENLRDALVQIVLRLRDD------ 277
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVGIA---PLMGPYG------GYKGDTAGDWSRSLY 272
+L ++ +S + P+ + P + PY GY D GD R L
Sbjct: 278 VLRDSVDRQNSEKDGKLTVATTDPLYASSYPLPALLPYRQQITPLGY--DHRGDIERGLE 335
Query: 273 SAPRDDL-------------------SSKEF-----SLRLVCPVANIGGVIGKGGAIINQ 308
P L +SK + + + P + + V+GK G ++
Sbjct: 336 VYPHSSLYGYSSLQAIDDGYSAVSSYASKGYGGRPPHMEMTIPASGLSKVMGKHGTNLDN 395
Query: 309 IRQESGAAIKV--DSSSTEGDDCLI--TVSSKEFFEDTLSATI 347
I + SGA I++ SS G I T K+ E+ + A I
Sbjct: 396 IIKISGAHIEIIESKSSRHGHVARISGTTEQKQSAENLIKAFI 438
>gi|147863214|emb|CAN78372.1| hypothetical protein VITISV_006585 [Vitis vinifera]
Length = 807
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 127/441 (28%), Positives = 215/441 (48%), Gaps = 59/441 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE------- 98
R L P ++G ++GRGG+IV+++R ++ ++IR+ +P ++ + S DE
Sbjct: 186 RLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRV---LP--KDHIPACASPGDELIQGSMK 240
Query: 99 ---------------TNAFEDGDKFVSPAQDALFKVHDRV--IAEELRGDEDSDGGHQVT 141
+ A +G V L+K V + L+G G
Sbjct: 241 RKGGVGRVVGGCCCCSRALREGYGVV------LWKKLGEVETLLRRLQGQVIKGGAE--- 291
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVV 201
D +G + KG ++S R LK P+ + + I+G V
Sbjct: 292 -------DIMGSRLSKGCSFA--VKSFYSLASRFLKG--FPTSIMWNPWGPNITGTFPAV 340
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS-LVGPTAATPIVGI-APLMGPYGGY 259
+KAL ++S L DNP A+A G+ + G + P G + L GP
Sbjct: 341 RKALLLVSSCLQDNPRADATNSAAAKPTGGMLHGNGMPGQLDSFPQRGYGSSLHGPDYHS 400
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+G ++ ++ + R L +E +L+C +G +IGKGG+II ++ E+GA+IK+
Sbjct: 401 RGYSSMPGPENIGANHRMVLE-EEVVFKLLCHFEKVGSLIGKGGSIIRXLQSETGASIKI 459
Query: 320 DSSSTEGDDCLITVSSKEF-----FEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRL 374
++ + D+ ++ +S++E E S +AV+R+ R +E I + G + RL
Sbjct: 460 ADAAPDSDERVVVISAREACTLTNXEQKHSPAQDAVIRVHCRIAE-IGFEPGA-AVVARL 517
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
LV + +IGCL+GKGG II+EMRR T A+IRI KE +PK S++DE+VQ+ G L +DA
Sbjct: 518 LVHSQQIGCLLGKGGIIISEMRRATGASIRIFAKEQVPKCGSQNDELVQVIGSLQSVQDA 577
Query: 435 LIQVMTRLRANLFDREGAVST 455
L + +R+R +F + ++S
Sbjct: 578 LFCITSRIRETIFPLKPSISN 598
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 125/222 (56%), Gaps = 19/222 (8%)
Query: 1 MAGQRNSYGKRSHSQT----DYADHG----PNKRRYTGDDRDQFIIGPEDTVYRYLCPIR 52
M GQ +S+ +R + + DY G P + R ++ E+ V++ LC
Sbjct: 377 MPGQLDSFPQRGYGSSLHGPDYHSRGYSSMPGPENIGANHR---MVLEEEVVFKLLCHFE 433
Query: 53 KIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPA 112
K+GS+IG+GG I++ L+ +T + I+I + P S+ERVV + ++ E + ++ SPA
Sbjct: 434 KVGSLIGKGGSIIRXLQSETGASIKIADAAPDSDERVVVI--SAREACTLTNXEQKHSPA 491
Query: 113 QDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQ 172
QDA+ +VH R+ + + G V A+LLV S QIGC++GKGG I+ +R TGA
Sbjct: 492 QDAVIRVHCRI------AEIGFEPGAAVVARLLVHSQQIGCLLGKGGIIISEMRRATGAS 545
Query: 173 IRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
IRI E +P C ++DELVQ+ G V+ AL I SR+ +
Sbjct: 546 IRIFAKEQVPKCGSQNDELVQVIGSLQSVQDALFCITSRIRE 587
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 101/180 (56%), Gaps = 30/180 (16%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYS--------- 94
++R LCP K G +IG+GG I++Q R DT +KIRI ++V G +ERV+ + +
Sbjct: 57 LFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKREA 116
Query: 95 -----------------ASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD-- 135
++ N D SPAQ AL +V +R++ + +E
Sbjct: 117 SAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKKE 176
Query: 136 --GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
G V +LL PS+Q+GCV+G+GG+IV+ IR E+GAQIR+L +H+P+CA DEL+Q
Sbjct: 177 DLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDELIQ 236
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 94/179 (52%), Gaps = 41/179 (22%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV------SSKEFF 339
R++CP GGVIGKGGAII Q R+++GA I++D S D+ +I + S +E
Sbjct: 58 FRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKREAS 117
Query: 340 ---------------------------EDTLSATIEAVVRLQPRC--------SEKIERD 364
+D S +A+VR+ R ++ + D
Sbjct: 118 AICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKKED 177
Query: 365 SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQ 423
G ++ RLL P++++GC++G+GG I+ ++R+ + A IR+LPK+++P AS DE++Q
Sbjct: 178 LGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDELIQ 236
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 27/186 (14%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
QV ++L P+ + G VIGKGG I++ R +TGA+IRI D+ + C + ++ I +A
Sbjct: 55 QVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRI--DDSVLGC---DERVILIVADA 109
Query: 199 SVVKKALCQIASRLHDNPSRSQHLLAS-----AISNSHSSSGSLVGPTAATPIVGIAPLM 253
K+ I ++ S +L S A+ + SS A +V + +
Sbjct: 110 VKSKREASAICGAEANDGEESANLSNSSPNPVAVDDDESS-------PAQQALVRVFERI 162
Query: 254 GPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQES 313
K D ++DL + RL+ P +G V+G+GG I+ +IRQES
Sbjct: 163 -----LKVDEE-----REEKEKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQES 212
Query: 314 GAAIKV 319
GA I+V
Sbjct: 213 GAQIRV 218
>gi|388500506|gb|AFK38319.1| unknown [Lotus japonicus]
Length = 437
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 155/284 (54%), Gaps = 29/284 (10%)
Query: 186 LRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS--------------- 230
+ D V I+GE+ VK+AL ++S ++ + L + + +
Sbjct: 1 MEFDNFVVITGESESVKRALFAVSSIMYKFGPKEDISLDTTVPEAPPSIIIPSEVPYYPH 60
Query: 231 ---HSSSGSLVGPTAATPIVGIAPLMGPYGGYK--GDTAGDWSRSL--YSAPRDDLSSKE 283
+ SS ++ P A I+G + GY G+T +S +L S D S+E
Sbjct: 61 GGLYPSSDPIIPPRAVPQIMGGTNIQD-VQGYADIGNTWPLYSSALPVVSGGVDASQSEE 119
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
+R++CP IG VIG+GG+ I +RQ SG I+VD S D+CLI +++ E D
Sbjct: 120 LIIRMLCPSNKIGRVIGRGGSTIKSMRQASGTRIEVDDSKANHDECLIIITTTESPSDLK 179
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
S +EAV+ +Q + S+ E D+ + +LLVP+ IGC+IGK GSII E+R+ T+A+I
Sbjct: 180 SMAVEAVLLIQGKISD--EDDT---EVSIQLLVPSKVIGCIIGKSGSIINEIRKRTRADI 234
Query: 404 RILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
RI K + PK A +DE+V++ G +D +DALIQ++ RLR ++
Sbjct: 235 RI-SKGDKPKCADVNDELVEVGGAIDCVRDALIQIILRLRDDVL 277
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 153/336 (45%), Gaps = 44/336 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+ + R LCP KIG +IGRGG +K +R + ++I + ++ +E ++ + +
Sbjct: 118 EELIIRMLCPSNKIGRVIGRGGSTIKSMRQASGTRIEVDDSKANHDECLIIITTT----- 172
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E S A +A+ + ++ DED +V+ +LLVPS IGC+IGK G
Sbjct: 173 --ESPSDLKSMAVEAVLLIQGKI------SDEDD---TEVSIQLLVPSKVIGCIIGKSGS 221
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD------ 214
I+ IR T A IRI K + P CA +DELV++ G V+ AL QI RL D
Sbjct: 222 IINEIRKRTRADIRISKGDK-PKCADVNDELVEVGGAIDCVRDALIQIILRLRDDVLRER 280
Query: 215 ----NPS---------RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
NP+ + + L + + S + +V A G+ L G
Sbjct: 281 DTGHNPTIGGESLYSGGAAYSLPPMLPSVSSVAAPMVYDQRAESATGMGMLSSSSLYGYG 340
Query: 262 DTAGDWSR---SLYSAPRDDLSS--KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA 316
+ W S+ S P S +L ++ P +G V+GKGGA I IR+ SGA
Sbjct: 341 SLSQMWESGYGSISSYPTKLYGSLPPPSTLDILIPANAVGKVLGKGGANIANIRKISGAT 400
Query: 317 IKVDSSSTEGDDCLI---TVSSKEFFEDTLSATIEA 349
I++ + GD + T K E+ + A I A
Sbjct: 401 IEISDARARGDRIALISGTPEEKRAAENLIQAFIMA 436
>gi|115479947|ref|NP_001063567.1| Os09g0498600 [Oryza sativa Japonica Group]
gi|113631800|dbj|BAF25481.1| Os09g0498600 [Oryza sativa Japonica Group]
gi|215695028|dbj|BAG90219.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 398
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 184/405 (45%), Gaps = 56/405 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ V+R +C +GSIIG+GG ++ L+ +T + I+I E SEERV+ + +
Sbjct: 24 QEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVI-------S 76
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A E+ + SPAQDA+ +VH R+ + D VTA+LLVPS IGC++GKGG
Sbjct: 77 AHENSEMMHSPAQDAVLRVHSRI------SESSMDKSSAVTARLLVPSQHIGCLLGKGGS 130
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN--PSR 218
I+ +R TGA IRI +E +P CA R+DELVQ++G ++ AL I R+ D P +
Sbjct: 131 IIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDVIIPMK 190
Query: 219 SQHLLASAISNSHSSSGSLVG---PTAATPIVGIAPLMGPYGGYKGD-TAGDWSRSLYSA 274
++ P P G+ P P ++ D G + +
Sbjct: 191 PHPGGGMPPYPPGGNAPPHHPRQEPAPPHPTGGMPPY--PMPSFRADRPMGPFDMVDHRP 248
Query: 275 P----RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCL 330
P + + + C +GG + Q S +A ++ ++E +
Sbjct: 249 PPPHSMEHMGADRMPYSYGC---------EQGGGPRPFLDQPSPSAWAPEAPNSEAPRNM 299
Query: 331 I-TVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGG 389
TV +F + ++ T + S T +++P IG + G G
Sbjct: 300 PETVPPADFRKGAVAGTNQVATP----------------SNATEVIIPRKYIGFICGANG 343
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
S + E+++++ A I + + PK + + +V I GD D K A
Sbjct: 344 SDLAEIKKMSGATITV----HHPK-PGDANALVIICGDPDQTKKA 383
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 109/180 (60%), Gaps = 2/180 (1%)
Query: 264 AGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
A ++S ++ + +E R++C +G +IGKGG+ I ++ E+GA+IK+ +
Sbjct: 6 ARNYSSNMAAPGPRFFVEQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPN 65
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGC 383
++ ++ +I +S+ E E S +AV+R+ R SE S + T RLLVP+ IGC
Sbjct: 66 SDSEERVIVISAHENSEMMHSPAQDAVLRVHSRISESSMDKSSAV--TARLLVPSQHIGC 123
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
L+GKGGSII EMR++T A IRI E +P+ A +DE+VQ++G +DAL+ + R+R
Sbjct: 124 LLGKGGSIIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIR 183
>gi|222641854|gb|EEE69986.1| hypothetical protein OsJ_29891 [Oryza sativa Japonica Group]
Length = 609
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 184/405 (45%), Gaps = 56/405 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ V+R +C +GSIIG+GG ++ L+ +T + I+I E SEERV+ + +
Sbjct: 235 QEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVI-------S 287
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A E+ + SPAQDA+ +VH R+ + D VTA+LLVPS IGC++GKGG
Sbjct: 288 AHENSEMMHSPAQDAVLRVHSRISESSM------DKSSAVTARLLVPSQHIGCLLGKGGS 341
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN--PSR 218
I+ +R TGA IRI +E +P CA R+DELVQ++G ++ AL I R+ D P +
Sbjct: 342 IIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDVIIPMK 401
Query: 219 SQHLLASAISNSHSSSGSLVG---PTAATPIVGIAPLMGPYGGYKGD-TAGDWSRSLYSA 274
++ P P G+ P P ++ D G + +
Sbjct: 402 PHPGGGMPPYPPGGNAPPHHPRQEPAPPHPTGGMPPY--PMPSFRADRPMGPFDMVDHRP 459
Query: 275 P----RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCL 330
P + + + C +GG + Q S +A ++ ++E +
Sbjct: 460 PPPHSMEHMGADRMPYSYGC---------EQGGGPRPFLDQPSPSAWAPEAPNSEAPRNM 510
Query: 331 I-TVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGG 389
TV +F + ++ T + S T +++P IG + G G
Sbjct: 511 PETVPPADFRKGAVAGTNQVATP----------------SNATEVIIPRKYIGFICGANG 554
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
S + E+++++ A I + + PK + + +V I GD D K A
Sbjct: 555 SDLAEIKKMSGATITV----HHPK-PGDANALVIICGDPDQTKKA 594
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 112/192 (58%), Gaps = 9/192 (4%)
Query: 258 GYKGDTAGDWSRSLYSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
GY + D+ YS+ PR +E R++C +G +IGKGG+ I ++
Sbjct: 206 GYLPPSMPDYHARNYSSNMAAPGPRF-FVEQEIVFRMICLNEMVGSIIGKGGSTIRALQS 264
Query: 312 ESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFT 371
E+GA+IK+ +++ ++ +I +S+ E E S +AV+R+ R SE S + T
Sbjct: 265 ETGASIKIIEPNSDSEERVIVISAHENSEMMHSPAQDAVLRVHSRISESSMDKSSAV--T 322
Query: 372 TRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLA 431
RLLVP+ IGCL+GKGGSII EMR++T A IRI E +P+ A +DE+VQ++G
Sbjct: 323 ARLLVPSQHIGCLLGKGGSIIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSI 382
Query: 432 KDALIQVMTRLR 443
+DAL+ + R+R
Sbjct: 383 QDALLHITGRIR 394
>gi|326504604|dbj|BAK06593.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 531
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 141/261 (54%), Gaps = 25/261 (9%)
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
+ISG S +KAL +++ L DNP S+ SG GP + VG P
Sbjct: 69 EISGSFSAARKALLLVSTCLQDNPRPD---------TSNFPSGRPFGPPGSG--VGCPPG 117
Query: 253 MGPYGG---YKGDTAGDWSRSLYSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGG 303
+ P+ D+ +S+ PR +E R++C +GGVIGKGG
Sbjct: 118 VDPHSQRSYLPPPHVPDYHARNFSSNGAAPGPRF-FVEQEIVFRMICLNDMVGGVIGKGG 176
Query: 304 AIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSE-KIE 362
+ I ++ E+GA++KV + D+ +I +S++E E S + +A++R+ + SE ++
Sbjct: 177 STIRALQSETGASVKVIDPVADSDERIIVISARENSEMMRSPSQDALLRVYSKISEASMD 236
Query: 363 RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+ S S RLLVP IGCL+GKGGSII EMR+LT A+IRI E +P+ A +DE+V
Sbjct: 237 KSS---SVPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIFGNEQIPRCAQRNDELV 293
Query: 423 QISGDLDLAKDALIQVMTRLR 443
Q++G +DAL+ + R+R
Sbjct: 294 QVTGSFQSIQDALLHITGRIR 314
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 119/213 (55%), Gaps = 21/213 (9%)
Query: 9 GKRSHSQTDY--ADHGP--NKRRYTGDDR---DQFIIGPEDTVYRYLCPIRKIGSIIGRG 61
G HSQ Y H P + R ++ + +F + ++ V+R +C +G +IG+G
Sbjct: 117 GVDPHSQRSYLPPPHVPDYHARNFSSNGAAPGPRFFVE-QEIVFRMICLNDMVGGVIGKG 175
Query: 62 GEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHD 121
G ++ L+ +T + +++ + V S+ER++ + +A E+ + SP+QDAL +V+
Sbjct: 176 GSTIRALQSETGASVKVIDPVADSDERIIVI-------SARENSEMMRSPSQDALLRVYS 228
Query: 122 RVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL 181
++ + D V A+LLVP+ IGC++GKGG I+ +R TGA IRI +E +
Sbjct: 229 KISEASM------DKSSSVPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIFGNEQI 282
Query: 182 PSCALRSDELVQISGEASVVKKALCQIASRLHD 214
P CA R+DELVQ++G ++ AL I R+ D
Sbjct: 283 PRCAQRNDELVQVTGSFQSIQDALLHITGRIRD 315
>gi|169647179|gb|ACA61608.1| hypothetical protein AP1_E07.1 [Arabidopsis lyrata subsp. petraea]
Length = 532
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 152/321 (47%), Gaps = 71/321 (22%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVP-GSEERVVTVYSAS--- 96
E +R LCP + G+IIG+GG +++ L+ T SKIR+ + +P SEERVV + + S
Sbjct: 240 ESVHFRLLCPASRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKK 299
Query: 97 -DETNAFE-----------------------DGDKFVSPAQDALFKVHDRVI----AEEL 128
D++N F+ D ++ S AQ AL +V +R++ A +
Sbjct: 300 KDDSNVFDSENPSSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVLERIVFGDDAASV 359
Query: 129 RGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRS 188
GD G + +++V +Q+ ++ KGG+++Q IR ++GA +RI + +P CA
Sbjct: 360 DGDGLDKGESESLCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISSTDQIPPCAFPG 419
Query: 189 DELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVG 248
D ++QI+G+ S VKKAL I + L + + A P
Sbjct: 420 DVVIQITGKFSSVKKALLLITNCLQE--------------------------SGAPPTWD 453
Query: 249 IAPLMGPYGGYKGDTAG-----DWSRSLYSAPRD------DLSSKEFSLRLVCPVANIGG 297
P P GY D W P D + +E S RL+CP +G
Sbjct: 454 ECPF--PQPGYPPDYHSMEYHPQWDHPPNPMPEDVVPFNRPVVEEEVSFRLLCPADKVGS 511
Query: 298 VIGKGGAIINQIRQESGAAIK 318
+IGKGGA++ ++ ESGA+IK
Sbjct: 512 LIGKGGAVVRALQNESGASIK 532
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 96/229 (41%), Gaps = 52/229 (22%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV------------- 319
S+ R +++ RL+CP + G +IGKGG++I ++ +G+ I+V
Sbjct: 231 SSKRPATAAESVHFRLLCPASRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVV 290
Query: 320 -------------------DSSSTE-----GDDCLITVSSKEFFEDTLSATIEAVVRLQP 355
+ SS E G +C T + E+ S+ A++R+
Sbjct: 291 LIIAPSGKKKDDSNVFDSENPSSEEPKQEKGSECAGTSGGDD--EEAPSSAQMALLRVLE 348
Query: 356 RC-----SEKIE---RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILP 407
R + ++ D G R++V +++ L+ KGG +I +R + A +RI
Sbjct: 349 RIVFGDDAASVDGDGLDKGESESLCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISS 408
Query: 408 KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
+ +P A D ++QI+G K AL+ L N GA T+
Sbjct: 409 TDQIPPCAFPGDVVIQITGKFSSVKKALL-----LITNCLQESGAPPTW 452
>gi|356546743|ref|XP_003541782.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 663
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 110/172 (63%), Gaps = 6/172 (3%)
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFED 341
+E S R++C +GGVIGKGG I+ ++ E+GA I + E +D LIT+++ E E
Sbjct: 309 QEVSFRILCSNDRVGGVIGKGGNIVRALQSETGATISIGPLVAECEDRLITIAASENPES 368
Query: 342 TLSATIEAVVRLQPRCSE---KIERDSGL---ISFTTRLLVPTSRIGCLIGKGGSIITEM 395
S +A V + R E + E DSGL + T RL+VP+S++GCLIGKGG I++E+
Sbjct: 369 RYSPAQKAAVLVFSRSIEVGFEKELDSGLNKGSTVTVRLVVPSSQVGCLIGKGGVIVSEI 428
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
R+ T ANIRI+ + +PK AS++D++VQISG+ +DAL RLR NLF
Sbjct: 429 RKATGANIRIIGTDQVPKCASDNDQVVQISGEFSSVQDALYNATGRLRDNLF 480
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 104/177 (58%), Gaps = 9/177 (5%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ +R LC ++G +IG+GG IV+ L+ +T + I IG V E+R++T+
Sbjct: 309 QEVSFRILCSNDRVGGVIGKGGNIVRALQSETGATISIGPLVAECEDRLITIA------- 361
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDS--DGGHQVTAKLLVPSDQIGCVIGKG 158
A E+ + SPAQ A V R I + DS + G VT +L+VPS Q+GC+IGKG
Sbjct: 362 ASENPESRYSPAQKAAVLVFSRSIEVGFEKELDSGLNKGSTVTVRLVVPSSQVGCLIGKG 421
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
G IV IR TGA IRI+ + +P CA +D++VQISGE S V+ AL RL DN
Sbjct: 422 GVIVSEIRKATGANIRIIGTDQVPKCASDNDQVVQISGEFSSVQDALYNATGRLRDN 478
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 118/205 (57%), Gaps = 8/205 (3%)
Query: 18 YADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIR 77
+ +GP+KR + P +R LC +IG +IG+ G ++K L+ T +KIR
Sbjct: 20 FPPNGPSKRSRQSKPPPPLSVPPGHVAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIR 79
Query: 78 IGETVPGSEERVVTVYS-ASDETNAFEDGDKFV--SPAQDALFKVHDRV--IAEELRGDE 132
I + S +RV+ V + A+ ++ V S AQ+AL KV DR+ +A E+ G +
Sbjct: 80 IEDAPQESPDRVILVIADAALSCKVLLRNEEVVEVSKAQEALLKVFDRILEVAAEMEGVD 139
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
D ++ +L+ S Q G VIGKGG++V+ I+ ETG +IR+L D+ LP CA SDE++
Sbjct: 140 VGD--RVMSCRLVADSAQAGSVIGKGGKVVERIKKETGCKIRVLTDD-LPLCASASDEMI 196
Query: 193 QISGEASVVKKALCQIASRLHDNPS 217
+I G S VKKAL ++ RL D PS
Sbjct: 197 EIEGRVSSVKKALVAVSQRLQDCPS 221
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 95/177 (53%), Gaps = 19/177 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD------------CL 330
+ RL+C + IGGVIGK G++I ++Q +GA I+++ + E D C
Sbjct: 44 HVAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQESPDRVILVIADAALSCK 103
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIER----DSGLISFTTRLLVPTSRIGCLIG 386
+ + ++E E +S EA++++ R E D G + RL+ +++ G +IG
Sbjct: 104 VLLRNEEVVE--VSKAQEALLKVFDRILEVAAEMEGVDVGDRVMSCRLVADSAQAGSVIG 161
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
KGG ++ +++ T IR+L ++LP AS DEM++I G + K AL+ V RL+
Sbjct: 162 KGGKVVERIKKETGCKIRVL-TDDLPLCASASDEMIEIEGRVSSVKKALVAVSQRLQ 217
>gi|79550843|ref|NP_178410.2| putative RNA-binding protein [Arabidopsis thaliana]
gi|45752620|gb|AAS76208.1| At2g03110 [Arabidopsis thaliana]
gi|46359791|gb|AAS88759.1| At2g03110 [Arabidopsis thaliana]
gi|330250570|gb|AEC05664.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 153
Score = 134 bits (338), Expect = 8e-29, Method: Composition-based stats.
Identities = 77/153 (50%), Positives = 106/153 (69%), Gaps = 11/153 (7%)
Query: 76 IRIGETVPGSEERVVTVYSASDETNAFEDGDK-FVSPAQDALFKVHD-------RVIAEE 127
+R+ E +PG +ERVVT+YS S+E N ED ++ FV PA DALFKVHD +
Sbjct: 1 MRVNEALPGCDERVVTIYSNSEERNRIEDDNEDFVCPAFDALFKVHDMVVVEEFDDDDDY 60
Query: 128 LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSC--A 185
DE S+G VT ++LVPSDQIG +IGKGG I+Q +R++T AQIR+ ++++LP C A
Sbjct: 61 NDNDEYSEGQTVVTVRMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRV-RNDNLPMCALA 119
Query: 186 LRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
L DEL+QI G+ S V++AL Q+A L++NPSR
Sbjct: 120 LSHDELLQIIGDPSAVREALYQVAFLLYNNPSR 152
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 366 GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLP--KIASEDDEMVQ 423
G T R+LVP+ +IG LIGKGG II +R T A IR+ +NLP +A DE++Q
Sbjct: 69 GQTVVTVRMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRV-RNDNLPMCALALSHDELLQ 127
Query: 424 ISGDLDLAKDALIQVMTRLRAN 445
I GD ++AL QV L N
Sbjct: 128 IIGDPSAVREALYQVAFLLYNN 149
>gi|297821485|ref|XP_002878625.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297324464|gb|EFH54884.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 633
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 205/437 (46%), Gaps = 38/437 (8%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSA---- 95
P++T R +C IG IIG G +V +LR +T +KI V GS+ VV + +
Sbjct: 22 PDETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVN 81
Query: 96 -----SDETNAFEDGDKF------VSPAQDALFKVHDR---VIAEELRGDEDSDGGHQVT 141
+D F G+ VS AQ AL +V +R V+A + G +
Sbjct: 82 KSVLLTDRVGDFSGGEHEDWVTCDVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEAY 141
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVV 201
+L +QIG V+G GG+ V+ +R +GA IR+L P C +DEL+QI+G+ V
Sbjct: 142 CGILADRNQIGAVLGLGGKNVEWMRRSSGAMIRVLPP---PICGTNTDELIQITGDVLAV 198
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
KKAL +++ + DNP + + I SS+ + P P +
Sbjct: 199 KKALVMVSTCIQDNPPVNGYPQPLCIKAYESSTDG----NSEDPHSEFFPNLRSSVPNAS 254
Query: 262 DTAGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
D+A +R L + + + + ++ +++ GG+IGK G II ++ E+GA+I +
Sbjct: 255 DSASS-NRHLPAVYDEGNGTERKVVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISIG 313
Query: 321 SSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-------ISFTTR 373
+ + ++T+S++E E S A+ + R E I+ + GL T+
Sbjct: 314 APLKVSGERVVTISARENLESRYSHAQNALALVFARSVE-IDVEKGLRPGLHNGAVVKTK 372
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
LLVP+ L+G G E T A++ I + + SE++ +++I G+ +
Sbjct: 373 LLVPSQFANSLVGNGNR---EAIIATGADVHIPVDNQILEWISENEVVIEIKGEYGHVQK 429
Query: 434 ALIQVMTRLRANLFDRE 450
AL V ++LR NL ++
Sbjct: 430 ALTHVSSKLRENLLPKK 446
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 96/186 (51%), Gaps = 14/186 (7%)
Query: 55 GSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQD 114
G IIG+ G I++ L+ +T + I IG + S ERVVT+ +A E+ + S AQ+
Sbjct: 289 GGIIGKQGTIIRALQNETGASISIGAPLKVSGERVVTI-------SARENLESRYSHAQN 341
Query: 115 ALFKVHDRVIAEELRGD--EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQ 172
AL V R + ++ G V KLLVPS ++G G + + I + TGA
Sbjct: 342 ALALVFARSVEIDVEKGLRPGLHNGAVVKTKLLVPSQFANSLVGNGNR--EAIIA-TGAD 398
Query: 173 IRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN--PSRSQHLLASAISNS 230
+ I D + ++ +++I GE V+KAL ++S+L +N P + + + +SN
Sbjct: 399 VHIPVDNQILEWISENEVVIEIKGEYGHVQKALTHVSSKLRENLLPKKVLGEMRARVSNP 458
Query: 231 HSSSGS 236
+ S+G+
Sbjct: 459 YESAGT 464
>gi|326530414|dbj|BAJ97633.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 116/182 (63%), Gaps = 9/182 (4%)
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFFE 340
+EFS+R++C IG VIG+ GA + Q+ Q++GA I V + + LI +SSKE
Sbjct: 65 EEFSIRILCASELIGPVIGRSGANVRQVEQQTGARIVVQELHKDASGERLIVISSKEIPA 124
Query: 341 DTLSATIEAVVRLQPRCS-----EKIERD-SGLISFTTRLLVPTSRIGCLIGKGGSIITE 394
D +S TIEA++ L + S E E + SG TRL+VP+ ++GC++G+GG +ITE
Sbjct: 125 DPVSPTIEALILLHSKVSASKVSEPSESEPSGEHKLVTRLVVPSKKVGCILGEGGKVITE 184
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVS 454
MRR A IR+ K + PK S ++E+VQ+SG D+A++AL ++ +RLR + R+G +S
Sbjct: 185 MRRRIGAEIRVYSKADKPKYLSFNEELVQVSGSPDIAREALTEIASRLRDRIL-RDG-IS 242
Query: 455 TF 456
+F
Sbjct: 243 SF 244
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 102/178 (57%), Gaps = 10/178 (5%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVP-GSEERVVTVYSASDE 98
PE+ R LC IG +IGR G V+Q+ T ++I + E S ER++ + +S E
Sbjct: 64 PEEFSIRILCASELIGPVIGRSGANVRQVEQQTGARIVVQELHKDASGERLIVI--SSKE 121
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD--GGHQVTAKLLVPSDQIGCVIG 156
A VSP +AL +H +V A ++ +S+ G H++ +L+VPS ++GC++G
Sbjct: 122 IPA-----DPVSPTIEALILLHSKVSASKVSEPSESEPSGEHKLVTRLVVPSKKVGCILG 176
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
+GG+++ +R GA+IR+ P ++ELVQ+SG + ++AL +IASRL D
Sbjct: 177 EGGKVITEMRRRIGAEIRVYSKADKPKYLSFNEELVQVSGSPDIAREALTEIASRLRD 234
>gi|218200638|gb|EEC83065.1| hypothetical protein OsI_28176 [Oryza sativa Indica Group]
gi|222640076|gb|EEE68208.1| hypothetical protein OsJ_26373 [Oryza sativa Japonica Group]
Length = 431
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 150/285 (52%), Gaps = 45/285 (15%)
Query: 189 DELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSS-----------SGSL 237
D VQI+G+A V+KAL +++ ++ PS+ L +++S+ S S +
Sbjct: 4 DNFVQITGDARAVRKALFAVSTIIYKCPSKETIPLETSVSDLPPSIIVPSELPVYPSSNF 63
Query: 238 VGPTAATPIVGIAPL--MG--PYGGYKGDTAGDWSR-----------SLYSAPRDDLSSK 282
P+ A G L +G P+ +A SR Y+ P+ S
Sbjct: 64 YSPSDAAISSGHPSLSILGSTPHVPELTVSADAHSRLPIYQSVLPVIPAYNTPK---CSG 120
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E LR++CP IG VIGKGG I IR+ESGA I VD S + ++ +IT++S E +D
Sbjct: 121 ELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSNEATDDA 180
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKAN 402
SA +EAV+ LQ + ++ E G + IGCLIGKGGSI+ +MR TKA
Sbjct: 181 KSAAVEAVLLLQSKINDDNE---GKV------------IGCLIGKGGSIVNDMRSKTKAA 225
Query: 403 IRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
I I E P+ AS DE+V++ G+++ +DAL+Q++ RLR ++
Sbjct: 226 IYISKGEK-PRKASSSDELVEVFGEVENLRDALVQIVLRLRDDVL 269
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 152/343 (44%), Gaps = 72/343 (20%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
+ V R LCP KIG +IG+GG +K +R ++ ++I + ++ EE ++T+ S
Sbjct: 121 ELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSN------ 174
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
E D S A +A+ + ++ ++D++G IGC+IGKGG I
Sbjct: 175 -EATDDAKSAAVEAVLLLQSKI-------NDDNEG------------KVIGCLIGKGGSI 214
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V ++RS+T A I I K E P A SDELV++ GE ++ AL QI RL D+
Sbjct: 215 VNDMRSKTKAAIYISKGEK-PRKASSSDELVEVFGEVENLRDALVQIVLRLRDD------ 267
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVGIA---PLMGPYG------GYKGDTAGDWSRSLY 272
+L ++ +S + P+ + P + PY GY D GD R L
Sbjct: 268 VLRDSVDRQNSEKDGKLTVATTDPLYASSYPLPALLPYRQQITPLGY--DHRGDIERGLE 325
Query: 273 SAPRDDL-------------------SSKEF-----SLRLVCPVANIGGVIGKGGAIINQ 308
P L +SK + + + P + + V+GK G ++
Sbjct: 326 VYPHSSLYGYSSLQAIDDGYSAVSSYASKGYGGRPPHMEMTIPASGLSKVMGKHGTNLDN 385
Query: 309 IRQESGAAIKV--DSSSTEGDDCLI--TVSSKEFFEDTLSATI 347
I + SGA I++ SS G I T K+ E+ + A I
Sbjct: 386 IIKISGAHIEIIESKSSRHGHVARISGTTEQKQSAENLIKAFI 428
>gi|297734587|emb|CBI16638.3| unnamed protein product [Vitis vinifera]
Length = 346
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 153/309 (49%), Gaps = 67/309 (21%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
DH KRR +D ++R + P R+IG +IG+ G ++++R +TK+ I+I
Sbjct: 47 DHRSPKRRAKN----------QDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIA 96
Query: 80 ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG--- 136
+ + EERV+ + S +D + +S A++AL +V ++ E+ D ++D
Sbjct: 97 DAIARHEERVIIISS--------KDSENVISDAENALLQVASLILKED---DSNTDALKV 145
Query: 137 --GHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR--SDE 190
GH V +LL+ Q GC+IG GQ ++ +R+ +GA I IL LP CA SD
Sbjct: 146 GVGHVVANAIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDR 205
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+VQISG+ V KAL +I +L +NP R ++ I+
Sbjct: 206 MVQISGDVPAVLKALEEIGCQLRENPPRQ--------------------------VISIS 239
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
P+ P +T + L D S+ +L ++ P +GG+IG+ G+ I++IR
Sbjct: 240 PIYNP------NTNRTSQQYL-----DPASADYVTLNMMIPETLVGGLIGRCGSNISRIR 288
Query: 311 QESGAAIKV 319
ESGA IKV
Sbjct: 289 NESGAMIKV 297
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 102/184 (55%), Gaps = 11/184 (5%)
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
+ +P+ +++ R+V P IG VIGK G+ I +IR+E+ A IK+ + ++ +I
Sbjct: 48 HRSPKRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVI 107
Query: 332 TVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSG--------LISFTTRLLVPTSRIGC 383
+SSK+ E+ +S A++++ ++ + ++ +++ RLL+ S+ GC
Sbjct: 108 IISSKD-SENVISDAENALLQVASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQAGC 166
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIAS--EDDEMVQISGDLDLAKDALIQVMTR 441
LIG G I ++R + A I ILP+ LP AS + D MVQISGD+ AL ++ +
Sbjct: 167 LIGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQ 226
Query: 442 LRAN 445
LR N
Sbjct: 227 LREN 230
>gi|212723602|ref|NP_001132277.1| uncharacterized protein LOC100193713 [Zea mays]
gi|194693942|gb|ACF81055.1| unknown [Zea mays]
Length = 510
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 106/164 (64%), Gaps = 5/164 (3%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFF 339
++EFS+R++C IG VIGK GA + ++ Q++GA IKV + + LI +SS E
Sbjct: 30 TEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSNEIP 89
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
+ +S IEA++ L + S E+ +TRL+VP+S++GC+IG+GG +IT+MRR T
Sbjct: 90 AEPISPAIEALILLHDKVSAPSEKHHS----STRLVVPSSKVGCIIGEGGKVITDMRRRT 145
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
A IR+ K + PK S DDE+VQ++G +A+ AL ++ +RLR
Sbjct: 146 GAEIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRLR 189
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 101/173 (58%), Gaps = 16/173 (9%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSASDET 99
E+ R LC IGS+IG+ G V+++ T ++I++ E S ER++ + +S+E
Sbjct: 31 EEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIII--SSNEI 88
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
A + +SPA +AL +HD+V A + H + +L+VPS ++GC+IG+GG
Sbjct: 89 PA-----EPISPAIEALILLHDKVSAPSEK--------HHSSTRLVVPSSKVGCIIGEGG 135
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+++ ++R TGA+IR+ P DELVQ++G ++ + AL +IASRL
Sbjct: 136 KVITDMRRRTGAEIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRL 188
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 365 SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQI 424
+G T L +P S +G ++G GG + E+R+++ A +R+ A + +V+I
Sbjct: 416 TGRFLSTIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAH-----AGSSESVVEI 470
Query: 425 SGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
G LD AK A + + AN ++ S+ +P++
Sbjct: 471 QGTLDQAKAAQSLLQGFISANSRQQQQPYSSRMPLY 506
>gi|147789223|emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera]
Length = 569
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 144/277 (51%), Gaps = 29/277 (10%)
Query: 190 ELVQISGEASVVKKALCQIASRLHDNPSR--------------SQHLLASAISNSHSSSG 235
++QI G+ VKKAL ++ RL D P+ Q L + G
Sbjct: 122 NVLQIEGDVLAVKKALVAVSRRLQDCPNVDKTKLIGGRPLEVVPQQSLPDPRVDLFQQRG 181
Query: 236 SLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANI 295
S++ P + I Y + + R P+ S +E +++C +
Sbjct: 182 SVLPPIPSNTIS--------YASGSRPLSINTERISTLDPKT--SQQEVIFKILCSNDRV 231
Query: 296 GGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQP 355
GGVIGKGG I+ ++ E+GA+I V + E D+ LIT+++ E E S V+ +
Sbjct: 232 GGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVILVFN 291
Query: 356 RCSEK-IER--DSGL--ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKEN 410
R E IE+ DSG + RL+VP++++GCL+GKGG+II+EMR+ + A IRI+ +
Sbjct: 292 RSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQ 351
Query: 411 LPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
+PK ASE+D++VQISG+ +D L + RLR NLF
Sbjct: 352 VPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLF 388
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 114/191 (59%), Gaps = 8/191 (4%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ +++ LC ++G +IG+GG IVK L+ + + I +G V +ER++T+
Sbjct: 218 QEVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITI-------T 270
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEEL-RGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
A E+ + SPAQ+ + V +R I + +G + G V+A+L+VPS+Q+GC++GKGG
Sbjct: 271 ASENPESRYSPAQNGVILVFNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGG 330
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
I+ +R +GA IRI+ + +P CA +D++VQISGE V+ L I RL DN S
Sbjct: 331 TIISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPS 390
Query: 220 QHLLASAISNS 230
+ L + I +S
Sbjct: 391 KTLNGAGIRSS 401
>gi|359489188|ref|XP_002272998.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 343
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 153/309 (49%), Gaps = 67/309 (21%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
DH KRR +D ++R + P R+IG +IG+ G ++++R +TK+ I+I
Sbjct: 47 DHRSPKRRAKN----------QDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIA 96
Query: 80 ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG--- 136
+ + EERV+ + S +D + +S A++AL +V ++ E+ D ++D
Sbjct: 97 DAIARHEERVIIISS--------KDSENVISDAENALLQVASLILKED---DSNTDALKV 145
Query: 137 --GHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR--SDE 190
GH V +LL+ Q GC+IG GQ ++ +R+ +GA I IL LP CA SD
Sbjct: 146 GVGHVVANAIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDR 205
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+VQISG+ V KAL +I +L +NP R ++ I+
Sbjct: 206 MVQISGDVPAVLKALEEIGCQLRENPPRQ--------------------------VISIS 239
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
P+ P +T + L D S+ +L ++ P +GG+IG+ G+ I++IR
Sbjct: 240 PIYNP------NTNRTSQQYL-----DPASADYVTLNMMIPETLVGGLIGRCGSNISRIR 288
Query: 311 QESGAAIKV 319
ESGA IKV
Sbjct: 289 NESGAMIKV 297
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 102/184 (55%), Gaps = 11/184 (5%)
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
+ +P+ +++ R+V P IG VIGK G+ I +IR+E+ A IK+ + ++ +I
Sbjct: 48 HRSPKRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVI 107
Query: 332 TVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSG--------LISFTTRLLVPTSRIGC 383
+SSK+ E+ +S A++++ ++ + ++ +++ RLL+ S+ GC
Sbjct: 108 IISSKD-SENVISDAENALLQVASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQAGC 166
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIAS--EDDEMVQISGDLDLAKDALIQVMTR 441
LIG G I ++R + A I ILP+ LP AS + D MVQISGD+ AL ++ +
Sbjct: 167 LIGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQ 226
Query: 442 LRAN 445
LR N
Sbjct: 227 LREN 230
>gi|168039902|ref|XP_001772435.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676232|gb|EDQ62717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 115/185 (62%), Gaps = 10/185 (5%)
Query: 31 DDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVV 90
D ++ P D V+R + P++K+G IIGR GE VK++ +T+S+I+I E VPG+ ER+V
Sbjct: 1 DGEKKWAGWPGDNVFRLVVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIV 60
Query: 91 TVYSASDETNAFEDGDKFVSPAQDALFKVHDRVI--AEELRGD-EDSDGGHQVTAKLLVP 147
V +A ED + +SPA + L +VH RVI AE D E + GG V+++LLV
Sbjct: 61 MV-------SAREDPEAAISPAMEGLLRVHRRVIEGAEPESVDAEIAPGGAPVSSRLLVA 113
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQ 207
+ Q G +IG+ G +++I+ +GA +R+L E LP CAL D +V++ G+ V++A+
Sbjct: 114 ATQAGSLIGRQGATIKSIQDTSGANVRVLPAEELPLCALADDRVVEVQGDPRNVQRAMEL 173
Query: 208 IASRL 212
+ S L
Sbjct: 174 VVSHL 178
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 100/182 (54%), Gaps = 12/182 (6%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RLV PV +GG+IG+ G + ++ +E+ + IK+ + ++ VS++E E +S
Sbjct: 15 FRLVVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAREDPEAAISP 74
Query: 346 TIEAVVRLQPRCSEKIERDS-------GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
+E ++R+ R E E +S G ++RLLV ++ G LIG+ G+ I ++
Sbjct: 75 AMEGLLRVHRRVIEGAEPESVDAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKSIQDT 134
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVP 458
+ AN+R+LP E LP A DD +V++ GD + A+ V++ LR L DR + +P
Sbjct: 135 SGANVRVLPAEELPLCALADDRVVEVQGDPRNVQRAMELVVSHLRKFLVDR-----SVLP 189
Query: 459 VF 460
+F
Sbjct: 190 LF 191
>gi|356528011|ref|XP_003532599.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 433
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 147/281 (52%), Gaps = 19/281 (6%)
Query: 186 LRSD--ELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAA 243
LR D EL QI G+ + VKKAL ++ RL D P + + + S + P +
Sbjct: 2 LRKDCLELYQIEGQLTSVKKALIAVSHRLQDCPPPDRTKMTGSRHYEVVQSETFSVPLES 61
Query: 244 TPIVGI-------APLMGPYGGYKGDTAGDWSRSL----YSAPRDDLSSKEFSLRLVCPV 292
+ I + L G+ +G S SA +E + R++C
Sbjct: 62 LTNLHIDHHLQRSSTLSTLSNRSNGNASGAHKLSAEVNRVSALDPKAYQQEVTFRIICSN 121
Query: 293 ANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR 352
+G VIGKGG+I+ ++ ESGA I V S E +D L+T+++ E E T S +AVV
Sbjct: 122 DRVGAVIGKGGSIVRALQNESGAIISVGPSLVECEDRLVTITASENPESTYSPAQKAVVL 181
Query: 353 LQPRCSEK-IERDSGLIS-----FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
+ + E +E+ L S T RL+VP++++GCL+GKGG+I++EMR+ T ANIR++
Sbjct: 182 VFSKSVEAGVEKGLELGSKKEPYVTARLVVPSNQVGCLLGKGGAIVSEMRKATGANIRVI 241
Query: 407 PKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
+ +P S++D++VQISG + A+ RLR +LF
Sbjct: 242 GNDQVPMCVSDNDQLVQISGVFSNVQAAIHNATGRLRDHLF 282
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 162/310 (52%), Gaps = 25/310 (8%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ +R +C ++G++IG+GG IV+ L+ ++ + I +G ++ E+R+VT+
Sbjct: 111 QEVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISVGPSLVECEDRLVTI-------T 163
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEEL-RGDE-DSDGGHQVTAKLLVPSDQIGCVIGKG 158
A E+ + SPAQ A+ V + + + +G E S VTA+L+VPS+Q+GC++GKG
Sbjct: 164 ASENPESTYSPAQKAVVLVFSKSVEAGVEKGLELGSKKEPYVTARLVVPSNQVGCLLGKG 223
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN--- 215
G IV +R TGA IR++ ++ +P C +D+LVQISG S V+ A+ RL D+
Sbjct: 224 GAIVSEMRKATGANIRVIGNDQVPMCVSDNDQLVQISGVFSNVQAAIHNATGRLRDHLFV 283
Query: 216 ---PSRSQHLLASAISN-------SHS-SSGSLVGPTAATPIVGIAPLMGPYGGYKGDTA 264
S L+S ++ SHS + SL G A + GI G G +G +
Sbjct: 284 STQNSGGARSLSSVLAGGQPTLAISHSLNRHSLPGLQAPQTVAGINS-RGTNGVSRGLIS 342
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
L S + + + ++++V P IG V G+ G+ + ++RQ SGA + V
Sbjct: 343 RKGGLELISGSKTAIVTNT-TVQIVVPDDVIGSVYGENGSNLARLRQISGAKVIVHEPRP 401
Query: 325 EGDDCLITVS 334
D I +S
Sbjct: 402 GTSDRTIIIS 411
>gi|297596401|ref|NP_001042525.2| Os01g0235800 [Oryza sativa Japonica Group]
gi|56783855|dbj|BAD81267.1| HEN4 -like [Oryza sativa Japonica Group]
gi|255673037|dbj|BAF04439.2| Os01g0235800 [Oryza sativa Japonica Group]
Length = 449
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 155/284 (54%), Gaps = 9/284 (3%)
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLA 224
+ +++ +IR+ KD+ LP CAL DEL QI+GE V+K L +A L +P + +L
Sbjct: 1 MSTDSCCEIRVSKDK-LPLCALPRDELCQITGELDSVRKGLNTVAQLLFTHPPKESDVLG 59
Query: 225 SAISNSHSSSGSLVGPTAATPIVGIAP-LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKE 283
+ NS SS P P G+ P L P+ G ++ +L + +
Sbjct: 60 A--HNSGSSRSFFNQPDVLPP--GMQPNLHLPFQGPNVAHLPNFPEALMHG-HGSVPPEP 114
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
+ RL+C +GG+IGKGG I I+ ++G IKV + + +D ++ +S D +
Sbjct: 115 LTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGDGI 174
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
S A++ +Q + G RL+V +++GCL+GKGGSII EMR+L+ A+I
Sbjct: 175 SPAQNAILHVQRKIVPTSNTKEG--PAICRLIVSPNQVGCLLGKGGSIIAEMRKLSGAHI 232
Query: 404 RILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
+L K+ +PK E+DE+VQISG + ++AL+Q+ RLR +LF
Sbjct: 233 IVLSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLF 276
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 164/367 (44%), Gaps = 79/367 (21%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+ PE +R LC K+G IIG+GG +K ++ DT +I++ +TVP SE+R+V + +
Sbjct: 110 VPPEPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPA- 168
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
GD +SPAQ+A+ V +++ ++ G + +L+V +Q+GC++GK
Sbjct: 169 -----HPGDG-ISPAQNAILHVQRKIVPTS-----NTKEGPAI-CRLIVSPNQVGCLLGK 216
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GG I+ +R +GA I +L + +P +DE+VQISG + +++AL QI +RL ++
Sbjct: 217 GGSIIAEMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLF 276
Query: 218 RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD----------TAGDW 267
R + +AS + N G LV P +G Y G+ +
Sbjct: 277 RDR--MASTVPNVQPPFG-LVDPQ--------------FGSYAGNHDSISPRIFPNVPQF 319
Query: 268 SRSLYSAPRDDLSSK-----------EFSLRLVCPVAN--IGGVIGKG------------ 302
+ P D++S+ SL + +A+ +GG G G
Sbjct: 320 HKDFIGRPLDEMSAPWTMKGMQVVGDPISLPDIPGMAHRGMGGFPGPGQPSIVSTITADV 379
Query: 303 --------------GAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIE 348
G +N+IR+ SGA I V D I +S + I+
Sbjct: 380 MVPKLVLPSLCGEDGGCLNRIREFSGAKITVADPMGNAMDTAILISGTPDQMHAARSLIQ 439
Query: 349 AVVRLQP 355
A V +P
Sbjct: 440 AFVLSEP 446
>gi|124359392|gb|ABN05856.1| KH, type 1 [Medicago truncatula]
Length = 564
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 110/172 (63%), Gaps = 6/172 (3%)
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFED 341
+E + +++C IGGVIGKGG II ++ E+GA + V S E +D LIT+++ E E
Sbjct: 127 QEITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITITASESPES 186
Query: 342 TLSATIEAVVRLQPRCSEK-IER--DSGL---ISFTTRLLVPTSRIGCLIGKGGSIITEM 395
S +A V + R E IE+ DSGL S T +L+V ++++GCL+GKGG I++EM
Sbjct: 187 RYSPAQKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQLVVSSNQVGCLLGKGGVIVSEM 246
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
R+ T A+IRI+ + + K AS++D++VQISG+ +DAL RLR NLF
Sbjct: 247 RKATGASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALYNATGRLRDNLF 298
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 104/177 (58%), Gaps = 9/177 (5%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ ++ +C +IG +IG+GG I++ L+ +T + + +G +V E+R++T+
Sbjct: 127 QEITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITI-------T 179
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDS--DGGHQVTAKLLVPSDQIGCVIGKG 158
A E + SPAQ A V R + + DS + G VTA+L+V S+Q+GC++GKG
Sbjct: 180 ASESPESRYSPAQKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQLVVSSNQVGCLLGKG 239
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
G IV +R TGA IRI+ + + CA +D++VQISGE S V+ AL RL DN
Sbjct: 240 GVIVSEMRKATGASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALYNATGRLRDN 296
>gi|42573788|ref|NP_974990.1| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010500|gb|AED97883.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 824
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 119/201 (59%), Gaps = 17/201 (8%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+G +D V++ LC G +IG GG++V+ L +T + I +G T+ EER++ V
Sbjct: 447 VGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAV----- 501
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ--VTAKLLVPSDQIGCVI 155
A E+ + SPAQ A+ + R+ EL ++ D G + +TA+L+VP+ QIGCV+
Sbjct: 502 --TASENPECQSSPAQKAIMLIFSRLF--ELATNKILDNGPRSSITARLVVPTSQIGCVL 557
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG IV +R TGA I+ILK E P C +D++VQI+GE V++A+ I SRL D+
Sbjct: 558 GKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDS 617
Query: 216 PSRSQHLLASAISNSHSSSGS 236
+ ++++ NS + S S
Sbjct: 618 ------VFSNSMKNSLAKSSS 632
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 108/174 (62%), Gaps = 4/174 (2%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
++ +++ +++C N GGVIG GG ++ + E+GA I V ++ + ++ LI V++ E
Sbjct: 446 EVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASE 505
Query: 338 FFEDTLSATIEAVV----RLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
E S +A++ RL + KI + S T RL+VPTS+IGC++GKGG I++
Sbjct: 506 NPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVS 565
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
EMR+ T A I+IL E PK SE+D++VQI+G+ ++A+ + +RLR ++F
Sbjct: 566 EMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVF 619
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 106/184 (57%), Gaps = 23/184 (12%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN---- 100
+R LCP+ +G++IG+ G ++KQL+ T +KIR+ E GS +RV+T+ + +D +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 101 -AFEDGD---------KFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQ 150
A +G+ VS AQ AL KV + + AE DSD V +LL S
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAE-----ADSD---TVVCRLLTESSH 160
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
G VIGKGGQ+V +IR ETG +I I + E+LP CA DE+V++ G A VKKAL I+
Sbjct: 161 AGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSISR 219
Query: 211 RLHD 214
L +
Sbjct: 220 CLQN 223
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 30/177 (16%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL- 343
+ RL+CP++++G VIGK G +I Q++Q +GA I+V+ + D +IT+ ++ + +
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 344 --------------------SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGC 383
S A++++ + + + D + RLL +S G
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSD----TVVCRLLTESSHAGA 163
Query: 384 LIGKGGSIITEMRRLT--KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
+IGKGG ++ +R+ T K +IRI ENLP A DDEMV++ G+ K AL+ +
Sbjct: 164 VIGKGGQMVGSIRKETGCKISIRI---ENLPICADTDDEMVEVEGNAIAVKKALVSI 217
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 66/190 (34%)
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
G V K+L ++ G VIG GG++V+ + SETGA I + L C R L+ ++
Sbjct: 448 GNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINV--GNTLDDCEER---LIAVT 502
Query: 196 G------EASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGI 249
++S +KA+ I SRL + LA+
Sbjct: 503 ASENPECQSSPAQKAIMLIFSRLFE--------LAT------------------------ 530
Query: 250 APLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQI 309
++ L + PR +++ RLV P + IG V+GKGG I++++
Sbjct: 531 ------------------NKILDNGPRSSITA-----RLVVPTSQIGCVLGKGGVIVSEM 567
Query: 310 RQESGAAIKV 319
R+ +GAAI++
Sbjct: 568 RKTTGAAIQI 577
>gi|334188619|ref|NP_001190612.1| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010502|gb|AED97885.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 866
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 119/201 (59%), Gaps = 17/201 (8%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+G +D V++ LC G +IG GG++V+ L +T + I +G T+ EER++ V
Sbjct: 447 VGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAV----- 501
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ--VTAKLLVPSDQIGCVI 155
A E+ + SPAQ A+ + R+ EL ++ D G + +TA+L+VP+ QIGCV+
Sbjct: 502 --TASENPECQSSPAQKAIMLIFSRLF--ELATNKILDNGPRSSITARLVVPTSQIGCVL 557
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG IV +R TGA I+ILK E P C +D++VQI+GE V++A+ I SRL D+
Sbjct: 558 GKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDS 617
Query: 216 PSRSQHLLASAISNSHSSSGS 236
+ ++++ NS + S S
Sbjct: 618 ------VFSNSMKNSLAKSSS 632
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 108/174 (62%), Gaps = 4/174 (2%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
++ +++ +++C N GGVIG GG ++ + E+GA I V ++ + ++ LI V++ E
Sbjct: 446 EVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASE 505
Query: 338 FFEDTLSATIEAVV----RLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
E S +A++ RL + KI + S T RL+VPTS+IGC++GKGG I++
Sbjct: 506 NPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVS 565
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
EMR+ T A I+IL E PK SE+D++VQI+G+ ++A+ + +RLR ++F
Sbjct: 566 EMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVF 619
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 106/184 (57%), Gaps = 23/184 (12%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN---- 100
+R LCP+ +G++IG+ G ++KQL+ T +KIR+ E GS +RV+T+ + +D +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 101 -AFEDGD---------KFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQ 150
A +G+ VS AQ AL KV + + AE DSD V +LL S
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAE-----ADSD---TVVCRLLTESSH 160
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
G VIGKGGQ+V +IR ETG +I I + E+LP CA DE+V++ G A VKKAL I+
Sbjct: 161 AGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSISR 219
Query: 211 RLHD 214
L +
Sbjct: 220 CLQN 223
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 30/177 (16%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL- 343
+ RL+CP++++G VIGK G +I Q++Q +GA I+V+ + D +IT+ ++ + +
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 344 --------------------SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGC 383
S A++++ + + + D + RLL +S G
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSD----TVVCRLLTESSHAGA 163
Query: 384 LIGKGGSIITEMRRLT--KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
+IGKGG ++ +R+ T K +IRI ENLP A DDEMV++ G+ K AL+ +
Sbjct: 164 VIGKGGQMVGSIRKETGCKISIRI---ENLPICADTDDEMVEVEGNAIAVKKALVSI 217
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 66/190 (34%)
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
G V K+L ++ G VIG GG++V+ + SETGA I + L C R L+ ++
Sbjct: 448 GNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINV--GNTLDDCEER---LIAVT 502
Query: 196 G------EASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGI 249
++S +KA+ I SRL + LA+
Sbjct: 503 ASENPECQSSPAQKAIMLIFSRLFE--------LAT------------------------ 530
Query: 250 APLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQI 309
++ L + PR +++ RLV P + IG V+GKGG I++++
Sbjct: 531 ------------------NKILDNGPRSSITA-----RLVVPTSQIGCVLGKGGVIVSEM 567
Query: 310 RQESGAAIKV 319
R+ +GAAI++
Sbjct: 568 RKTTGAAIQI 577
>gi|296088778|emb|CBI38228.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 143/276 (51%), Gaps = 29/276 (10%)
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSR--------------SQHLLASAISNSHSSSGS 236
++ I G+ VKKAL ++ RL D P+ Q L + GS
Sbjct: 139 MIIIEGDVLAVKKALVAVSRRLQDCPNVDKTKLIGGRPLEVVPQQSLPDPRVDLFQQRGS 198
Query: 237 LVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIG 296
++ P + I Y + + R P+ S +E +++C +G
Sbjct: 199 VLPPIPSNTI--------SYASGSRPLSINTERISTLDPKT--SQQEVIFKILCSNDRVG 248
Query: 297 GVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPR 356
GVIGKGG I+ ++ E+GA+I V + E D+ LIT+++ E E S V+ + R
Sbjct: 249 GVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVILVFNR 308
Query: 357 CSEK-IER--DSGL--ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENL 411
E IE+ DSG + RL+VP++++GCL+GKGG+II+EMR+ + A IRI+ + +
Sbjct: 309 SIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQV 368
Query: 412 PKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
PK ASE+D++VQISG+ +D L + RLR NLF
Sbjct: 369 PKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLF 404
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 114/191 (59%), Gaps = 8/191 (4%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ +++ LC ++G +IG+GG IVK L+ + + I +G V +ER++T+
Sbjct: 234 QEVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITI-------T 286
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEEL-RGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
A E+ + SPAQ+ + V +R I + +G + G V+A+L+VPS+Q+GC++GKGG
Sbjct: 287 ASENPESRYSPAQNGVILVFNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGG 346
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
I+ +R +GA IRI+ + +P CA +D++VQISGE V+ L I RL DN S
Sbjct: 347 TIISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPS 406
Query: 220 QHLLASAISNS 230
+ L + I +S
Sbjct: 407 KTLNGAGIRSS 417
>gi|9759415|dbj|BAB09870.1| unnamed protein product [Arabidopsis thaliana]
Length = 833
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 119/201 (59%), Gaps = 17/201 (8%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+G +D V++ LC G +IG GG++V+ L +T + I +G T+ EER++ V
Sbjct: 447 VGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAV----- 501
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ--VTAKLLVPSDQIGCVI 155
A E+ + SPAQ A+ + R+ EL ++ D G + +TA+L+VP+ QIGCV+
Sbjct: 502 --TASENPECQSSPAQKAIMLIFSRLF--ELATNKILDNGPRSSITARLVVPTSQIGCVL 557
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG IV +R TGA I+ILK E P C +D++VQI+GE V++A+ I SRL D+
Sbjct: 558 GKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDS 617
Query: 216 PSRSQHLLASAISNSHSSSGS 236
+ ++++ NS + S S
Sbjct: 618 ------VFSNSMKNSLAKSSS 632
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 108/174 (62%), Gaps = 4/174 (2%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
++ +++ +++C N GGVIG GG ++ + E+GA I V ++ + ++ LI V++ E
Sbjct: 446 EVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASE 505
Query: 338 FFEDTLSATIEAVV----RLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
E S +A++ RL + KI + S T RL+VPTS+IGC++GKGG I++
Sbjct: 506 NPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVS 565
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
EMR+ T A I+IL E PK SE+D++VQI+G+ ++A+ + +RLR ++F
Sbjct: 566 EMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVF 619
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 106/184 (57%), Gaps = 23/184 (12%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN---- 100
+R LCP+ +G++IG+ G ++KQL+ T +KIR+ E GS +RV+T+ + +D +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 101 -AFEDGD---------KFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQ 150
A +G+ VS AQ AL KV + + AE DSD V +LL S
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAE-----ADSD---TVVCRLLTESSH 160
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
G VIGKGGQ+V +IR ETG +I I + E+LP CA DE+V++ G A VKKAL I+
Sbjct: 161 AGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSISR 219
Query: 211 RLHD 214
L +
Sbjct: 220 CLQN 223
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 30/177 (16%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL- 343
+ RL+CP++++G VIGK G +I Q++Q +GA I+V+ + D +IT+ ++ + +
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 344 --------------------SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGC 383
S A++++ + + + D + RLL +S G
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSD----TVVCRLLTESSHAGA 163
Query: 384 LIGKGGSIITEMRRLT--KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
+IGKGG ++ +R+ T K +IRI ENLP A DDEMV++ G+ K AL+ +
Sbjct: 164 VIGKGGQMVGSIRKETGCKISIRI---ENLPICADTDDEMVEVEGNAIAVKKALVSI 217
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 66/190 (34%)
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
G V K+L ++ G VIG GG++V+ + SETGA I + L C R L+ ++
Sbjct: 448 GNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINV--GNTLDDCEER---LIAVT 502
Query: 196 G------EASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGI 249
++S +KA+ I SRL + LA+
Sbjct: 503 ASENPECQSSPAQKAIMLIFSRLFE--------LAT------------------------ 530
Query: 250 APLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQI 309
++ L + PR +++ RLV P + IG V+GKGG I++++
Sbjct: 531 ------------------NKILDNGPRSSITA-----RLVVPTSQIGCVLGKGGVIVSEM 567
Query: 310 RQESGAAIKV 319
R+ +GAAI++
Sbjct: 568 RKTTGAAIQI 577
>gi|22328051|ref|NP_201244.2| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010501|gb|AED97884.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 857
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 119/201 (59%), Gaps = 17/201 (8%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+G +D V++ LC G +IG GG++V+ L +T + I +G T+ EER++ V
Sbjct: 447 VGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAV----- 501
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ--VTAKLLVPSDQIGCVI 155
A E+ + SPAQ A+ + R+ EL ++ D G + +TA+L+VP+ QIGCV+
Sbjct: 502 --TASENPECQSSPAQKAIMLIFSRLF--ELATNKILDNGPRSSITARLVVPTSQIGCVL 557
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG IV +R TGA I+ILK E P C +D++VQI+GE V++A+ I SRL D+
Sbjct: 558 GKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDS 617
Query: 216 PSRSQHLLASAISNSHSSSGS 236
+ ++++ NS + S S
Sbjct: 618 ------VFSNSMKNSLAKSSS 632
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 108/174 (62%), Gaps = 4/174 (2%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
++ +++ +++C N GGVIG GG ++ + E+GA I V ++ + ++ LI V++ E
Sbjct: 446 EVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASE 505
Query: 338 FFEDTLSATIEAVV----RLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
E S +A++ RL + KI + S T RL+VPTS+IGC++GKGG I++
Sbjct: 506 NPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVS 565
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
EMR+ T A I+IL E PK SE+D++VQI+G+ ++A+ + +RLR ++F
Sbjct: 566 EMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVF 619
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 106/184 (57%), Gaps = 23/184 (12%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN---- 100
+R LCP+ +G++IG+ G ++KQL+ T +KIR+ E GS +RV+T+ + +D +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 101 -AFEDGD---------KFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQ 150
A +G+ VS AQ AL KV + + AE DSD V +LL S
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAE-----ADSD---TVVCRLLTESSH 160
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
G VIGKGGQ+V +IR ETG +I I + E+LP CA DE+V++ G A VKKAL I+
Sbjct: 161 AGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSISR 219
Query: 211 RLHD 214
L +
Sbjct: 220 CLQN 223
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 30/177 (16%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL- 343
+ RL+CP++++G VIGK G +I Q++Q +GA I+V+ + D +IT+ ++ + +
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 344 --------------------SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGC 383
S A++++ + + + D + RLL +S G
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSD----TVVCRLLTESSHAGA 163
Query: 384 LIGKGGSIITEMRRLT--KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
+IGKGG ++ +R+ T K +IRI ENLP A DDEMV++ G+ K AL+ +
Sbjct: 164 VIGKGGQMVGSIRKETGCKISIRI---ENLPICADTDDEMVEVEGNAIAVKKALVSI 217
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 66/190 (34%)
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
G V K+L ++ G VIG GG++V+ + SETGA I + L C R L+ ++
Sbjct: 448 GNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINV--GNTLDDCEER---LIAVT 502
Query: 196 G------EASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGI 249
++S +KA+ I SRL + LA+
Sbjct: 503 ASENPECQSSPAQKAIMLIFSRLFE--------LAT------------------------ 530
Query: 250 APLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQI 309
++ L + PR +++ RLV P + IG V+GKGG I++++
Sbjct: 531 ------------------NKILDNGPRSSITA-----RLVVPTSQIGCVLGKGGVIVSEM 567
Query: 310 RQESGAAIKV 319
R+ +GAAI++
Sbjct: 568 RKTTGAAIQI 577
>gi|30681758|ref|NP_850026.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|330252232|gb|AEC07326.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 632
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 205/443 (46%), Gaps = 50/443 (11%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSA---- 95
P++T R +C IG IIG G +V +LR +T +KI V GS+ VV + +
Sbjct: 22 PDETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVN 81
Query: 96 -----SDETNAFEDGDK------FVSPAQDALFKVHDR---VIAEELRGDEDSDGGHQVT 141
+D F G+ VS AQ AL +V +R V+A + G +
Sbjct: 82 QSILLTDRVGEFSGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEAY 141
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVV 201
+L +QIG V+G GG+ V+ +R +GA IR+L P C ++DEL+QI+G+ V
Sbjct: 142 CGILADRNQIGAVLGLGGKNVEWMRRNSGAMIRVLPP---PICGTKNDELIQITGDVLAV 198
Query: 202 KKALCQIASRLHDNPSRSQHLLASAIS--NSHSSSGSLVGPTAA-TPIVGIAPLMGPYGG 258
KKAL ++S + +N + + +I S S+ G+ P + P + + L
Sbjct: 199 KKALVMVSSYIQNNAPLNGYPPPLSIKGYESLSTDGNSEDPHSEFFPNLRSSSL------ 252
Query: 259 YKGDTAGDWSRSLYSAPRDDLSSKE----FSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
A + S P D +S E F + VA GG+IGK G II ++ E+G
Sbjct: 253 ---SNATEIVASNRHLPYDGGNSTERKVVFKIIFTSVVA--GGIIGKQGTIIRALQNETG 307
Query: 315 AAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL------- 367
A+I V + + ++TVS++E E S A+ + R E I+ + GL
Sbjct: 308 ASISVGAPLKVSGERVVTVSARENLESRYSHAQNALALVFARSVE-IDVEKGLRPGLHNG 366
Query: 368 ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD 427
T+LLVP+ G G E T A++ I + + SE++ +++I G+
Sbjct: 367 AIVKTKLLVPSHFANSFNGNGNR---EAIIATGADVHISVGNQVLEWISENEVVIEIKGE 423
Query: 428 LDLAKDALIQVMTRLRANLFDRE 450
+ AL V ++LR NL ++
Sbjct: 424 YSHVQKALTHVSSKLRENLLPKK 446
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 18/198 (9%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFE 103
V++ + G IIG+ G I++ L+ +T + I +G + S ERVVTV +A E
Sbjct: 278 VFKIIFTSVVAGGIIGKQGTIIRALQNETGASISVGAPLKVSGERVVTV-------SARE 330
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGD--EDSDGGHQVTAKLLVPSDQIGCVIGKGGQ- 160
+ + S AQ+AL V R + ++ G V KLLVPS G G +
Sbjct: 331 NLESRYSHAQNALALVFARSVEIDVEKGLRPGLHNGAIVKTKLLVPSHFANSFNGNGNRE 390
Query: 161 -IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN--PS 217
I+ TGA + I + ++ +++I GE S V+KAL ++S+L +N P
Sbjct: 391 AIIA-----TGADVHISVGNQVLEWISENEVVIEIKGEYSHVQKALTHVSSKLRENLLPK 445
Query: 218 RSQHLLASAISNSHSSSG 235
+ + + +SN + S+G
Sbjct: 446 KVLGEMRARVSNPYESAG 463
>gi|357445989|ref|XP_003593272.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482320|gb|AES63523.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 766
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 110/172 (63%), Gaps = 6/172 (3%)
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFED 341
+E + +++C IGGVIGKGG II ++ E+GA + V S E +D LIT+++ E E
Sbjct: 329 QEITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITITASESPES 388
Query: 342 TLSATIEAVVRLQPRCSEK-IER--DSGL---ISFTTRLLVPTSRIGCLIGKGGSIITEM 395
S +A V + R E IE+ DSGL S T +L+V ++++GCL+GKGG I++EM
Sbjct: 389 RYSPAQKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQLVVSSNQVGCLLGKGGVIVSEM 448
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
R+ T A+IRI+ + + K AS++D++VQISG+ +DAL RLR NLF
Sbjct: 449 RKATGASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALYNATGRLRDNLF 500
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 104/177 (58%), Gaps = 9/177 (5%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ ++ +C +IG +IG+GG I++ L+ +T + + +G +V E+R++T+
Sbjct: 329 QEITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITI-------T 381
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDS--DGGHQVTAKLLVPSDQIGCVIGKG 158
A E + SPAQ A V R + + DS + G VTA+L+V S+Q+GC++GKG
Sbjct: 382 ASESPESRYSPAQKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQLVVSSNQVGCLLGKG 441
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
G IV +R TGA IRI+ + + CA +D++VQISGE S V+ AL RL DN
Sbjct: 442 GVIVSEMRKATGASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALYNATGRLRDN 498
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 180/390 (46%), Gaps = 67/390 (17%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFE- 103
+R LC +IG +IG+ G ++K L++ T +KIRI ++ S +RV+ V AS+
Sbjct: 50 FRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGASNIDGKVMV 109
Query: 104 -----DGDKF-VSPAQDALFKVHDRV--IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVI 155
DG+ VS AQ+AL +V DR+ +A E+ G E D V+ +L+ S Q G VI
Sbjct: 110 RSHSGDGEAIEVSKAQEALLRVFDRILEVAAEMEGIELGD--RTVSCRLVADSAQAGSVI 167
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG++V+ I+ +TG +I + KD +LP+C DE+++I G S VKKAL ++ L D
Sbjct: 168 GKGGKVVEKIKKDTGCKIWVCKD-NLPACISSPDEVIEIEGSVSSVKKALVAVSRNLQD- 225
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
+H H+ + G + I + G +L S P
Sbjct: 226 ----RH---------HADRTKMTGQNSHEVI------------HHEALVGVPRETLMSVP 260
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
R+ P + + ++ + Q A + SSS + ++S+
Sbjct: 261 RETFIGAPRETLTAVPCETLTDL------HVDHLLQRRSALSILPSSSNSYATGVHSLSA 314
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
+ + V L+P+ ++ T +++ RIG +IGKGG+II +
Sbjct: 315 E----------VNRVSSLEPKAHQQ--------EITFKIICSNDRIGGVIGKGGNIIRAL 356
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQIS 425
+ T A + + P +A +D ++ I+
Sbjct: 357 QSETGATVSV-----GPSVAECEDRLITIT 381
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 23/188 (12%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
+ RL+C + IGGVIGK G +I ++ +GA I+++ S E D +I V +
Sbjct: 47 HVAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGASNIDGK 106
Query: 343 --------------LSATIEAVVRLQPRCSEKIERDSGL----ISFTTRLLVPTSRIGCL 384
+S EA++R+ R E G+ + + RL+ +++ G +
Sbjct: 107 VMVRSHSGDGEAIEVSKAQEALLRVFDRILEVAAEMEGIELGDRTVSCRLVADSAQAGSV 166
Query: 385 IGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRA 444
IGKGG ++ ++++ T I + K+NLP S DE+++I G + K AL+ V
Sbjct: 167 IGKGGKVVEKIKKDTGCKIWVC-KDNLPACISSPDEVIEIEGSVSSVKKALVAV----SR 221
Query: 445 NLFDREGA 452
NL DR A
Sbjct: 222 NLQDRHHA 229
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 57/191 (29%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
GH V +LL S +IG VIGK G +++N++ TGA+IRI E P+ + D ++ + G
Sbjct: 46 GH-VAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRI---EDSPNES--PDRVIMVIG 99
Query: 197 EASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATP--------IVG 248
+++ K + + SHS G + + A I+
Sbjct: 100 ASNIDGKVMVR----------------------SHSGDGEAIEVSKAQEALLRVFDRILE 137
Query: 249 IAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQ 308
+A M +G GD + S RLV A G VIGKGG ++ +
Sbjct: 138 VAAEM------EGIELGD---------------RTVSCRLVADSAQAGSVIGKGGKVVEK 176
Query: 309 IRQESGAAIKV 319
I++++G I V
Sbjct: 177 IKKDTGCKIWV 187
>gi|4314357|gb|AAD15568.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 649
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 205/443 (46%), Gaps = 50/443 (11%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSA---- 95
P++T R +C IG IIG G +V +LR +T +KI V GS+ VV + +
Sbjct: 22 PDETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVN 81
Query: 96 -----SDETNAFEDGDK------FVSPAQDALFKVHDR---VIAEELRGDEDSDGGHQVT 141
+D F G+ VS AQ AL +V +R V+A + G +
Sbjct: 82 QSILLTDRVGEFSGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEAY 141
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVV 201
+L +QIG V+G GG+ V+ +R +GA IR+L P C ++DEL+QI+G+ V
Sbjct: 142 CGILADRNQIGAVLGLGGKNVEWMRRNSGAMIRVLPP---PICGTKNDELIQITGDVLAV 198
Query: 202 KKALCQIASRLHDNPSRSQHLLASAIS--NSHSSSGSLVGPTAA-TPIVGIAPLMGPYGG 258
KKAL ++S + +N + + +I S S+ G+ P + P + + L
Sbjct: 199 KKALVMVSSYIQNNAPLNGYPPPLSIKGYESLSTDGNSEDPHSEFFPNLRSSSL------ 252
Query: 259 YKGDTAGDWSRSLYSAPRDDLSSKE----FSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
A + S P D +S E F + VA GG+IGK G II ++ E+G
Sbjct: 253 ---SNATEIVASNRHLPYDGGNSTERKVVFKIIFTSVVA--GGIIGKQGTIIRALQNETG 307
Query: 315 AAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL------- 367
A+I V + + ++TVS++E E S A+ + R E I+ + GL
Sbjct: 308 ASISVGAPLKVSGERVVTVSARENLESRYSHAQNALALVFARSVE-IDVEKGLRPGLHNG 366
Query: 368 ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD 427
T+LLVP+ G G E T A++ I + + SE++ +++I G+
Sbjct: 367 AIVKTKLLVPSHFANSFNGNGNR---EAIIATGADVHISVGNQVLEWISENEVVIEIKGE 423
Query: 428 LDLAKDALIQVMTRLRANLFDRE 450
+ AL V ++LR NL ++
Sbjct: 424 YSHVQKALTHVSSKLRENLLPKK 446
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 92/187 (49%), Gaps = 18/187 (9%)
Query: 55 GSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQD 114
G IIG+ G I++ L+ +T + I +G + S ERVVTV +A E+ + S AQ+
Sbjct: 289 GGIIGKQGTIIRALQNETGASISVGAPLKVSGERVVTV-------SARENLESRYSHAQN 341
Query: 115 ALFKVHDRVIAEELRGD--EDSDGGHQVTAKLLVPSDQIGCVIGKGGQ--IVQNIRSETG 170
AL V R + ++ G V KLLVPS G G + I+ TG
Sbjct: 342 ALALVFARSVEIDVEKGLRPGLHNGAIVKTKLLVPSHFANSFNGNGNREAIIA-----TG 396
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN--PSRSQHLLASAIS 228
A + I + ++ +++I GE S V+KAL ++S+L +N P + + + +S
Sbjct: 397 ADVHISVGNQVLEWISENEVVIEIKGEYSHVQKALTHVSSKLRENLLPKKVLGEMRARVS 456
Query: 229 NSHSSSG 235
N + S+G
Sbjct: 457 NPYESAG 463
>gi|242045198|ref|XP_002460470.1| hypothetical protein SORBIDRAFT_02g028920 [Sorghum bicolor]
gi|241923847|gb|EER96991.1| hypothetical protein SORBIDRAFT_02g028920 [Sorghum bicolor]
Length = 371
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 179/387 (46%), Gaps = 43/387 (11%)
Query: 54 IGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQ 113
+GSIIG+GG ++ L+ +T + I+I E V S+ERVV + +A E+ D SPAQ
Sbjct: 8 VGSIIGKGGSTIRALQSETGACIKILELVADSDERVVAI-------SARENSDMMHSPAQ 60
Query: 114 DALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQI 173
DA+ +V+ R+ + D A+LLVPS IGC++GKGG I+ +R TGA I
Sbjct: 61 DAVVRVYSRI------SEASMDRSSPTPARLLVPSQHIGCLLGKGGSIITEMRKITGASI 114
Query: 174 RILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSS 233
RI +E +P CA R+DE+VQ++G ++ AL I R+ D + H S
Sbjct: 115 RIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRD----------VILPKPHPS 164
Query: 234 SGSLVGPTAATPIVGIAPL----MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSL--R 287
G P VG P+ P + + G ++S R D F
Sbjct: 165 GG-----MPPYPPVGNIPVHQSRQEPPPPHLHPSGGMPPYPMHSF-RPDAPMGHFETGDH 218
Query: 288 LVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATI 347
PV ++ +G + ++ G ++ S ++ E + A +
Sbjct: 219 RPPPVHSM-EYMGADRMPYSYGGEQGGPRPFLEQPSPRTWPPEAPRTNSEAPRNMPDAVL 277
Query: 348 EAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILP 407
+R P SE + + S TT +++P IG + G GS I E+R+++ A+I +
Sbjct: 278 ATDLRKGPVASEN--QVATPTSTTTEVVIPCKYIGFVCGNSGSEIEEIRQMSGASITV-- 333
Query: 408 KENLPKIASEDDEMVQISGDLDLAKDA 434
+ PK + + +V I GD + K A
Sbjct: 334 --HDPK-PGDTNSIVVICGDPEQTKKA 357
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 104/169 (61%), Gaps = 7/169 (4%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ 354
+G +IGKGG+ I ++ E+GA IK+ + D+ ++ +S++E + S +AVVR+
Sbjct: 8 VGSIIGKGGSTIRALQSETGACIKILELVADSDERVVAISARENSDMMHSPAQDAVVRVY 67
Query: 355 PRCSE-KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPK 413
R SE ++R S RLLVP+ IGCL+GKGGSIITEMR++T A+IRI E +P+
Sbjct: 68 SRISEASMDRSS---PTPARLLVPSQHIGCLLGKGGSIITEMRKITGASIRIFGNEQIPR 124
Query: 414 IASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDRE---GAVSTFVPV 459
A +DEMVQ++G +DAL+ + R+R + + G + + PV
Sbjct: 125 CAQRNDEMVQVTGSFQSIQDALLHITGRIRDVILPKPHPSGGMPPYPPV 173
>gi|297794027|ref|XP_002864898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297310733|gb|EFH41157.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 865
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 115/199 (57%), Gaps = 13/199 (6%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+G +D V++ LC G +IG GG++V+ L +T + I +G T+ EER++ V
Sbjct: 455 VGNQDVVFKILCSTENAGGVIGSGGKVVRMLHSETGAFINVGNTLADCEERLIAV----- 509
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
A E+ + SPAQ A+ + R+ + D+ +TA+L+VP+ QIGCV+GK
Sbjct: 510 --TAPENPECQSSPAQKAIMLLFSRLFELSTKKILDNGPRTSITARLVVPTSQIGCVLGK 567
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GG IV +R TGA I+ILK E P C +D+++QI+GE V++A+ I SRL D+
Sbjct: 568 GGVIVSEMRKTTGATIQILKVEQNPKCVSENDQVIQITGEFPNVREAIFHITSRLRDS-- 625
Query: 218 RSQHLLASAISNSHSSSGS 236
+ ++++ NS + S S
Sbjct: 626 ----VFSNSMKNSITKSSS 640
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 108/174 (62%), Gaps = 4/174 (2%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
++ +++ +++C N GGVIG GG ++ + E+GA I V ++ + ++ LI V++ E
Sbjct: 454 EVGNQDVVFKILCSTENAGGVIGSGGKVVRMLHSETGAFINVGNTLADCEERLIAVTAPE 513
Query: 338 FFEDTLSATIEAVVRLQPRCSE----KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
E S +A++ L R E KI + S T RL+VPTS+IGC++GKGG I++
Sbjct: 514 NPECQSSPAQKAIMLLFSRLFELSTKKILDNGPRTSITARLVVPTSQIGCVLGKGGVIVS 573
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
EMR+ T A I+IL E PK SE+D+++QI+G+ ++A+ + +RLR ++F
Sbjct: 574 EMRKTTGATIQILKVEQNPKCVSENDQVIQITGEFPNVREAIFHITSRLRDSVF 627
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 105/184 (57%), Gaps = 23/184 (12%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LCP+ +G++IG+ G ++KQL+ T +KIR+ E GS +RV+T+ + +D + +
Sbjct: 47 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPFGSPDRVITIIAQADSKSRVKL 106
Query: 105 G--------------DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQ 150
G + VS AQ AL KV + + AE DSD V +LL S
Sbjct: 107 GVNNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAE-----ADSD---TVVCRLLTESSH 158
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
G VIGKGGQ+V +IR ETG +I I + E+LP CA DE+V+I G A VKKAL I+
Sbjct: 159 AGAVIGKGGQMVGSIRKETGCKISI-RTENLPICADTDDEMVEIEGNAIAVKKALVSISR 217
Query: 211 RLHD 214
L +
Sbjct: 218 CLQN 221
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 18/171 (10%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV----SSKEFFE 340
+ RL+CP++++G VIGK G +I Q++Q +GA I+V+ D +IT+ SK +
Sbjct: 46 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPFGSPDRVITIIAQADSKSRVK 105
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLI-------------SFTTRLLVPTSRIGCLIGK 387
++ A + E + LI + RLL +S G +IGK
Sbjct: 106 LGVNNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVVCRLLTESSHAGAVIGK 165
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
GG ++ +R+ T I I ENLP A DDEMV+I G+ K AL+ +
Sbjct: 166 GGQMVGSIRKETGCKISIR-TENLPICADTDDEMVEIEGNAIAVKKALVSI 215
>gi|168018585|ref|XP_001761826.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686881|gb|EDQ73267.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 355
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 112/177 (63%), Gaps = 11/177 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D V+R + P++K+G IIGR GE VK++ +T+S+I+I E VPG+ ER+V V
Sbjct: 7 PGDNVFRLIVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMV------- 59
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVI--AEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIG 156
+A ED + +SPA + L +VH RVI AE D E + GG V+++LLV + Q G +IG
Sbjct: 60 SAREDPEAAISPAMEGLLRVHRRVIEGAEPESADAEIAPGGAPVSSRLLVAATQAGSLIG 119
Query: 157 KGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+ G +++I+ +GA +R+L E LP CAL D +V+++GE V++A + + L
Sbjct: 120 RQGATIKSIQDSSGATVRVLPAAEELPLCALADDRVVEVTGEPRNVQRATELVVAHL 176
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 98/183 (53%), Gaps = 13/183 (7%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ PV +GG+IG+ G + ++ +E+ + IK+ + ++ VS++E E +S
Sbjct: 12 FRLIVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAREDPEAAISP 71
Query: 346 TIEAVVRLQPRCSEKIERDS-------GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
+E ++R+ R E E +S G ++RLLV ++ G LIG+ G+ I ++
Sbjct: 72 AMEGLLRVHRRVIEGAEPESADAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKSIQDS 131
Query: 399 TKANIRILP-KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFV 457
+ A +R+LP E LP A DD +V+++G+ + A V+ LR L DR + +
Sbjct: 132 SGATVRVLPAAEELPLCALADDRVVEVTGEPRNVQRATELVVAHLRKFLVDR-----SVL 186
Query: 458 PVF 460
P+F
Sbjct: 187 PLF 189
>gi|356536806|ref|XP_003536925.1| PREDICTED: poly(rC)-binding protein 1-like [Glycine max]
Length = 561
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 104/174 (59%), Gaps = 8/174 (4%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P + V+R L P++K+GSIIGR GE ++++ DTK++I+I + PG+ ER V V
Sbjct: 159 PGENVFRMLVPVQKVGSIIGRKGEFIRKITEDTKARIKILDGPPGTSERAVMV------- 211
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGG-HQVTAKLLVPSDQIGCVIGKG 158
+A E+ D + PA D L +VH +V+ + + + G V +LLV Q G +IGK
Sbjct: 212 SAKEEPDCSIPPAVDGLLRVHKQVVNVDPHPADSASGAVRPVVTRLLVADTQAGSLIGKQ 271
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G +++ + TG IRIL EHLP ALR D +V+I GE+S V KA+ +A L
Sbjct: 272 GSTIKSFQDATGCNIRILGSEHLPVFALRDDSIVEIQGESSGVHKAVELVAIHL 325
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 261 GDTAGDWSRSLYSAPRDDLSSKEFS----------LRLVCPVANIGGVIGKGGAIINQIR 310
GD ++ P +DL E R++ PV +G +IG+ G I +I
Sbjct: 129 GDVTENFGSEEKRGPEEDLKGGEVKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIRKIT 188
Query: 311 QESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC----SEKIERDSG 366
+++ A IK+ + + VS+KE + ++ ++ ++R+ + + SG
Sbjct: 189 EDTKARIKILDGPPGTSERAVMVSAKEEPDCSIPPAVDGLLRVHKQVVNVDPHPADSASG 248
Query: 367 LI-SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQIS 425
+ TRLLV ++ G LIGK GS I + T NIRIL E+LP A DD +V+I
Sbjct: 249 AVRPVVTRLLVADTQAGSLIGKQGSTIKSFQDATGCNIRILGSEHLPVFALRDDSIVEIQ 308
Query: 426 GDLDLAKDALIQVMTRLRANLFDR 449
G+ A+ V LR L DR
Sbjct: 309 GESSGVHKAVELVAIHLRKFLVDR 332
>gi|28261403|gb|AAO37828.1| HEN4 [Arabidopsis thaliana]
Length = 869
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 117/201 (58%), Gaps = 17/201 (8%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+G +D V++ LC G +IG GG++V+ L +T + I +G + EER++ V
Sbjct: 459 VGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAV----- 513
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ--VTAKLLVPSDQIGCVI 155
A E+ + SPAQ A+ + R+ EL ++ D G + +TA+L+VP+ QIGCV+
Sbjct: 514 --TASENPECQSSPAQKAIMLIFSRLF--ELATNKILDNGPRSSITARLVVPTSQIGCVL 569
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG IV +R TGA I+ILK E P C +D++VQI+ E V++A+ I SRL D+
Sbjct: 570 GKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITEEFPNVREAIFHITSRLRDS 629
Query: 216 PSRSQHLLASAISNSHSSSGS 236
+ ++++ NS + S S
Sbjct: 630 ------VFSNSMKNSLAKSSS 644
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 107/174 (61%), Gaps = 4/174 (2%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
++ +++ +++C N GGVIG GG ++ + E+GA I V ++ + ++ LI V++ E
Sbjct: 458 EVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAVTASE 517
Query: 338 FFEDTLSATIEAVV----RLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
E S +A++ RL + KI + S T RL+VPTS+IGC++GKGG I++
Sbjct: 518 NPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVS 577
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
EMR+ T A I+IL E PK SE+D++VQI+ + ++A+ + +RLR ++F
Sbjct: 578 EMRKTTGAAIQILKVEQNPKCISENDQVVQITEEFPNVREAIFHITSRLRDSVF 631
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 106/184 (57%), Gaps = 23/184 (12%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN---- 100
+R LCP+ +G++IG+ G ++KQL+ T +KIR+ E GS +RV+T+ + +D +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 101 -AFEDGD---------KFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQ 150
A +G+ VS AQ AL KV + + AE DSD V +LL S
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAE-----ADSD---TVVCRLLTESSH 160
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
G VIGKGGQ+V +IR ETG +I I + E+LP CA DE+V++ G A VKKAL I+
Sbjct: 161 AGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSISR 219
Query: 211 RLHD 214
L +
Sbjct: 220 CLQN 223
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 30/177 (16%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL- 343
+ RL+CP++++G VIGK G +I Q++Q +GA I+V+ + D +IT+ ++ + +
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 344 --------------------SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGC 383
S A++++ + + + D + RLL +S G
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSD----TVVCRLLTESSHAGA 163
Query: 384 LIGKGGSIITEMRRLT--KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
+IGKGG ++ +R+ T K +IRI ENLP A DDEMV++ G+ K AL+ +
Sbjct: 164 VIGKGGQMVGSIRKETGCKISIRI---ENLPICADTDDEMVEVEGNAIAVKKALVSI 217
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 66/190 (34%)
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
G V K+L ++ G VIG GG++V+ + SETGA I + L C R L+ ++
Sbjct: 460 GNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINV--GNALDDCEER---LIAVT 514
Query: 196 G------EASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGI 249
++S +KA+ I SRL + LA+
Sbjct: 515 ASENPECQSSPAQKAIMLIFSRLFE--------LAT------------------------ 542
Query: 250 APLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQI 309
++ L + PR +++ RLV P + IG V+GKGG I++++
Sbjct: 543 ------------------NKILDNGPRSSITA-----RLVVPTSQIGCVLGKGGVIVSEM 579
Query: 310 RQESGAAIKV 319
R+ +GAAI++
Sbjct: 580 RKTTGAAIQI 589
>gi|28261405|gb|AAO37829.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 836
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 117/201 (58%), Gaps = 17/201 (8%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+G +D V++ LC G +IG GG++V+ L +T + I +G + EER++ V
Sbjct: 459 VGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAV----- 513
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ--VTAKLLVPSDQIGCVI 155
A E+ + SPAQ A+ + R+ EL ++ D G + +TA+L+VP+ QIGCV+
Sbjct: 514 --TASENPECQSSPAQKAIMLIFSRLF--ELATNKILDNGPRSSITARLVVPTSQIGCVL 569
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG IV +R TGA I+ILK E P C +D++VQI+ E V++A+ I SRL D+
Sbjct: 570 GKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITEEFPNVREAIFHITSRLRDS 629
Query: 216 PSRSQHLLASAISNSHSSSGS 236
+ ++++ NS + S S
Sbjct: 630 ------VFSNSMKNSLAKSSS 644
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 107/174 (61%), Gaps = 4/174 (2%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
++ +++ +++C N GGVIG GG ++ + E+GA I V ++ + ++ LI V++ E
Sbjct: 458 EVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAVTASE 517
Query: 338 FFEDTLSATIEAVV----RLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
E S +A++ RL + KI + S T RL+VPTS+IGC++GKGG I++
Sbjct: 518 NPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVS 577
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
EMR+ T A I+IL E PK SE+D++VQI+ + ++A+ + +RLR ++F
Sbjct: 578 EMRKTTGAAIQILKVEQNPKCISENDQVVQITEEFPNVREAIFHITSRLRDSVF 631
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 106/184 (57%), Gaps = 23/184 (12%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN---- 100
+R LCP+ +G++IG+ G ++KQL+ T +KIR+ E GS +RV+T+ + +D +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 101 -AFEDGD---------KFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQ 150
A +G+ VS AQ AL KV + + AE DSD V +LL S
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAE-----ADSD---TVVCRLLTESSH 160
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
G VIGKGGQ+V +IR ETG +I I + E+LP CA DE+V++ G A VKKAL I+
Sbjct: 161 AGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSISR 219
Query: 211 RLHD 214
L +
Sbjct: 220 CLQN 223
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 30/177 (16%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL- 343
+ RL+CP++++G VIGK G +I Q++Q +GA I+V+ + D +IT+ ++ + +
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 344 --------------------SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGC 383
S A++++ + + + D + RLL +S G
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSD----TVVCRLLTESSHAGA 163
Query: 384 LIGKGGSIITEMRRLT--KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
+IGKGG ++ +R+ T K +IRI ENLP A DDEMV++ G+ K AL+ +
Sbjct: 164 VIGKGGQMVGSIRKETGCKISIRI---ENLPICADTDDEMVEVEGNAIAVKKALVSI 217
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 66/190 (34%)
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
G V K+L ++ G VIG GG++V+ + SETGA I + L C R L+ ++
Sbjct: 460 GNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINV--GNALDDCEER---LIAVT 514
Query: 196 G------EASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGI 249
++S +KA+ I SRL + LA+
Sbjct: 515 ASENPECQSSPAQKAIMLIFSRLFE--------LAT------------------------ 542
Query: 250 APLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQI 309
++ L + PR +++ RLV P + IG V+GKGG I++++
Sbjct: 543 ------------------NKILDNGPRSSITA-----RLVVPTSQIGCVLGKGGVIVSEM 579
Query: 310 RQESGAAIKV 319
R+ +GAAI++
Sbjct: 580 RKTTGAAIQI 589
>gi|147817258|emb|CAN62067.1| hypothetical protein VITISV_030085 [Vitis vinifera]
Length = 288
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 103/182 (56%), Gaps = 30/182 (16%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYS-------- 94
++R LCP K G +IG+GG I++Q R DT +KIRI ++V G +ERV+ + +
Sbjct: 100 VLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKRE 159
Query: 95 ----ASDETNAFEDG--------------DKFVSPAQDALFKVHDRVIAEELRGDEDSD- 135
E N E+ D SPAQ AL +V +R++ + +E
Sbjct: 160 ASAICGAEANDGEESANLRNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKK 219
Query: 136 ---GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
G V +LL PS+Q+GCV+G+GG+IV+ IR E+GAQIR+L +H+P+CA DEL+
Sbjct: 220 EDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDELI 279
Query: 193 QI 194
Q+
Sbjct: 280 QV 281
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 96/184 (52%), Gaps = 41/184 (22%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV------SSKE-- 337
R++CP GGVIGKGGAII Q R+++GA I++D S D+ +I + S +E
Sbjct: 102 FRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKREAS 161
Query: 338 -------------------------FFEDTLSATIEAVVRLQPRC--------SEKIERD 364
+D S +A+VR+ R ++ + D
Sbjct: 162 AICGAEANDGEESANLRNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKKED 221
Query: 365 SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQI 424
G ++ RLL P++++GC++G+GG I+ ++R+ + A IR+LPK+++P AS DE++Q+
Sbjct: 222 LGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDELIQV 281
Query: 425 SGDL 428
L
Sbjct: 282 VHKL 285
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 34/211 (16%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
QV ++L P+ + G VIGKGG I++ R +TGA+IRI D+ + C + ++ I +A
Sbjct: 99 QVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRI--DDSVLGC---DERVILIVADA 153
Query: 199 SVVKKALCQIASRLHDNPSRSQHLLAS-----AISNSHSSSGSLVGPTAATPIVGIAPLM 253
K+ I ++ S +L S A+ + SS A +V + +
Sbjct: 154 VKSKREASAICGAEANDGEESANLRNSSPNPVAVDDDESSP-------AQQALVRVFERI 206
Query: 254 GPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQES 313
K D ++DL + RL+ P +G V+G+GG I+ +IRQES
Sbjct: 207 -----LKVDEE-----REEKEKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQES 256
Query: 314 GAAIKV------DSSSTEGDDCLITVSSKEF 338
GA I+V + ++ GD+ LI V K F
Sbjct: 257 GAQIRVLPKDHIPACASPGDE-LIQVVHKLF 286
>gi|255561873|ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 548
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 110/176 (62%), Gaps = 11/176 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P ++V+R L P +K+GSIIGR GE +K++ +T+++I+I + PG+ ER V V
Sbjct: 149 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMV------- 201
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDED---SDGGHQVTAKLLVPSDQIGCVIG 156
+A E+ D + PA D L +VH R++ + L GD S G +V+ +LLVP+ Q G +IG
Sbjct: 202 SAKEEPDSALPPAMDGLLRVHKRIV-DGLDGDSSHASSGTGTKVSTRLLVPASQAGSLIG 260
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
K G V++I+ + +R+L E LP AL+ D +V++ G+A+ V KA+ IAS L
Sbjct: 261 KQGGTVKSIQEASSCVVRVLGAEDLPVFALQDDRVVEVLGDAAGVHKAVELIASHL 316
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 95/184 (51%), Gaps = 11/184 (5%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G I +I +E+ A IK+ + + VS+KE +
Sbjct: 151 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSA 210
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCLIGKGGSIITEMR 396
L ++ ++R+ R + ++ DS S +TRLLVP S+ G LIGK G + ++
Sbjct: 211 LPPAMDGLLRVHKRIVDGLDGDSSHASSGTGTKVSTRLLVPASQAGSLIGKQGGTVKSIQ 270
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
+ +R+L E+LP A +DD +V++ GD A+ + + LR L DR +
Sbjct: 271 EASSCVVRVLGAEDLPVFALQDDRVVEVLGDAAGVHKAVELIASHLRKFLVDR-----SI 325
Query: 457 VPVF 460
+P+F
Sbjct: 326 IPLF 329
>gi|384248562|gb|EIE22046.1| hypothetical protein COCSUDRAFT_43031 [Coccomyxa subellipsoidea
C-169]
Length = 243
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 105/185 (56%), Gaps = 31/185 (16%)
Query: 24 NKRRYTGDDRD-------QFI---IGPE-DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDT 72
+KRRY DDRD Q I GP+ +TVYR L +K+GS+IG+ G IVK +R +T
Sbjct: 75 SKRRY--DDRDGPPDAKRQAIGAAEGPQTETVYRLLVQSKKVGSVIGKAGTIVKAIRDET 132
Query: 73 KSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDE 132
++IR+ E VP +ERV+ + +A D + AQ+ALFKVH RV E
Sbjct: 133 GARIRVVEGVPNCDERVIVI-------SARSDAARHTDAAQEALFKVHARV-------HE 178
Query: 133 DSDGGH----QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRS 188
+G H T ++LV Q GC+IGK G I++ IR +GA I+IL E LP C L +
Sbjct: 179 HEEGPHPPPANATTRMLVCHTQAGCLIGKAGAIIKEIREASGAHIKILPAEDLPPCGLSN 238
Query: 189 DELVQ 193
D +VQ
Sbjct: 239 DRVVQ 243
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 78/142 (54%), Gaps = 1/142 (0%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E RL+ +G VIGK G I+ IR E+GA I+V D+ +I +S++
Sbjct: 102 ETVYRLLVQSKKVGSVIGKAGTIVKAIRDETGARIRVVEGVPNCDERVIVISARSDAARH 161
Query: 343 LSATIEAVVRLQPRCSEKIE-RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
A EA+ ++ R E E + TTR+LV ++ GCLIGK G+II E+R + A
Sbjct: 162 TDAAQEALFKVHARVHEHEEGPHPPPANATTRMLVCHTQAGCLIGKAGAIIKEIREASGA 221
Query: 402 NIRILPKENLPKIASEDDEMVQ 423
+I+ILP E+LP +D +VQ
Sbjct: 222 HIKILPAEDLPPCGLSNDRVVQ 243
>gi|224137186|ref|XP_002327061.1| predicted protein [Populus trichocarpa]
gi|222835376|gb|EEE73811.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 142/291 (48%), Gaps = 59/291 (20%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
D ++R + P KIG +IG+ G ++++R DTK+ I+I + V EERV+ + S +E A
Sbjct: 50 DVIFRIVVPSGKIGKVIGKQGHRIQKIREDTKATIKIADAVARHEERVIIISSKENENGA 109
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDS---------DGGHQV--TAKLLVPSDQ 150
+ A++AL ++ + ++ E+ G + GH T +LL+ Q
Sbjct: 110 TD--------AENALQRIAELILNEDDGGSSAGGGVEIGKLVNAGHVAANTIRLLIAGSQ 161
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSC--ALRSDELVQISGEASVVKKALCQI 208
G +IG GQ + +R+ +GA I +L LP C A SD +VQISG+ VV KAL +I
Sbjct: 162 AGSLIGMSGQNIVKLRNSSGAMITVLAPNQLPLCASAYESDRVVQISGDVPVVLKALEEI 221
Query: 209 ASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWS 268
+L +NP + IS S S + S V P+ Y A D+
Sbjct: 222 GCQLRENPPK------QVISISPSYNYSAV----------------PFQQYAPQAAADY- 258
Query: 269 RSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
++ ++ P +GG+IG+ G+ I++IR ESGA IKV
Sbjct: 259 ---------------VTMEMMVPETMMGGLIGRSGSNISRIRVESGAVIKV 294
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 92/197 (46%), Gaps = 27/197 (13%)
Query: 276 RDDLSSKEFS-----------LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
RDD E S R+V P IG VIGK G I +IR+++ A IK+ +
Sbjct: 32 RDDFDGGETSAAKRQARADVIFRIVVPSGKIGKVIGKQGHRIQKIREDTKATIKIADAVA 91
Query: 325 EGDDCLITVSSKEF------FEDTLSATIEAVVRLQPRCSE--------KIERDSGLISF 370
++ +I +SSKE E+ L E ++ S K+ + +
Sbjct: 92 RHEERVIIISSKENENGATDAENALQRIAELILNEDDGGSSAGGGVEIGKLVNAGHVAAN 151
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIAS--EDDEMVQISGDL 428
T RLL+ S+ G LIG G I ++R + A I +L LP AS E D +VQISGD+
Sbjct: 152 TIRLLIAGSQAGSLIGMSGQNIVKLRNSSGAMITVLAPNQLPLCASAYESDRVVQISGDV 211
Query: 429 DLAKDALIQVMTRLRAN 445
+ AL ++ +LR N
Sbjct: 212 PVVLKALEEIGCQLREN 228
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 11/76 (14%)
Query: 110 SPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAK----------LLVPSDQIGCVIGKGG 159
SP L K++ + + R D D DGG AK ++VPS +IG VIGK G
Sbjct: 12 SPPGTELPKLNALPVTAKRRRD-DFDGGETSAAKRQARADVIFRIVVPSGKIGKVIGKQG 70
Query: 160 QIVQNIRSETGAQIRI 175
+Q IR +T A I+I
Sbjct: 71 HRIQKIREDTKATIKI 86
>gi|356504987|ref|XP_003521274.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 529
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 109/184 (59%), Gaps = 8/184 (4%)
Query: 30 GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERV 89
G++ ++ P + V+R L P++K+GSIIGR GE +K++ +TK++I+I + PG ER
Sbjct: 113 GNEIKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERA 172
Query: 90 VTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVI-AEELRGDEDSDGGHQVTAKLLVPS 148
V V +A E+ D+ + PA D L +VH +VI + D G V +LLV
Sbjct: 173 VMV-------SAKEEPDRPIPPAIDGLLRVHKQVINVDRDLVDSALAAGRSVVTRLLVAD 225
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI 208
Q G +IGK G +++I+ +G IR+L E+LP ALR D +V+I GE++ V KA+ I
Sbjct: 226 TQAGSLIGKQGSTIKSIQDGSGCTIRVLGSENLPVFALRDDSIVEIQGESAGVHKAVELI 285
Query: 209 ASRL 212
A L
Sbjct: 286 AVHL 289
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 7/173 (4%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ PV +G +IG+ G I +I +E+ A IK+ + + VS+KE +
Sbjct: 125 ENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKEEPDRP 184
Query: 343 LSATIEAVVRLQPRCSEKIERD---SGLI---SFTTRLLVPTSRIGCLIGKGGSIITEMR 396
+ I+ ++R+ + ++RD S L S TRLLV ++ G LIGK GS I ++
Sbjct: 185 IPPAIDGLLRVHKQVI-NVDRDLVDSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQ 243
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+ IR+L ENLP A DD +V+I G+ A+ + LR L DR
Sbjct: 244 DGSGCTIRVLGSENLPVFALRDDSIVEIQGESAGVHKAVELIAVHLRKFLVDR 296
>gi|449442959|ref|XP_004139248.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 483
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 108/175 (61%), Gaps = 10/175 (5%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P ++V+R L P +K+GSIIGR GE +K++ +T+++I+I + PG+ ER V V SA DE
Sbjct: 82 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMV-SAKDEP 140
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGD--EDSDGGHQVTAKLLVPSDQIGCVIGK 157
D PA D L +VH R++ + L GD + G +V+ +LLV + Q G +IGK
Sbjct: 141 ------DSAFPPAVDGLLRVHKRIV-DGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIGK 193
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G V++I+ E+ +R+L E LP AL+ D +V++ G+ + V KA+ IAS L
Sbjct: 194 QGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHL 248
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 92/183 (50%), Gaps = 10/183 (5%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G I +I +E+ A IK+ + + VS+K+ +
Sbjct: 84 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSA 143
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLI-----SFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
++ ++R+ R + +E D+ +TRLLV S+ G LIGK G + ++
Sbjct: 144 FPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIGKQGGTVKSIQE 203
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFV 457
+ +R+L E+LP A +DD +V++ GD A+ + + LR L DR + +
Sbjct: 204 ESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDR-----SII 258
Query: 458 PVF 460
PVF
Sbjct: 259 PVF 261
>gi|356572245|ref|XP_003554280.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 528
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 108/184 (58%), Gaps = 8/184 (4%)
Query: 30 GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERV 89
G++ ++ P + V+R L P++K+GSIIGR GE +K++ +TK++I+I + PG ER
Sbjct: 112 GNEIKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERA 171
Query: 90 VTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVI-AEELRGDEDSDGGHQVTAKLLVPS 148
V V +A E+ D + PA D L +VH +VI + D G V +LLV
Sbjct: 172 VMV-------SAKEEPDCPIPPAVDGLLRVHKQVINVDRDLADSALAAGRSVVTRLLVAD 224
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI 208
Q G +IGK G +++I+ +G IR+L E+LP ALR D +V+I GE++ V KA+ I
Sbjct: 225 TQAGSLIGKQGSTIKSIQDGSGCTIRVLGSENLPIFALRDDSIVEIQGESAGVHKAVELI 284
Query: 209 ASRL 212
A L
Sbjct: 285 AVHL 288
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 89/173 (51%), Gaps = 7/173 (4%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ PV +G +IG+ G I +I +E+ A IK+ + + VS+KE +
Sbjct: 124 ENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKEEPDCP 183
Query: 343 LSATIEAVVRLQPRCSEKIERD---SGLI---SFTTRLLVPTSRIGCLIGKGGSIITEMR 396
+ ++ ++R+ + ++RD S L S TRLLV ++ G LIGK GS I ++
Sbjct: 184 IPPAVDGLLRVHKQVI-NVDRDLADSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQ 242
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+ IR+L ENLP A DD +V+I G+ A+ + LR L DR
Sbjct: 243 DGSGCTIRVLGSENLPIFALRDDSIVEIQGESAGVHKAVELIAVHLRKFLVDR 295
>gi|255541092|ref|XP_002511610.1| conserved hypothetical protein [Ricinus communis]
gi|223548790|gb|EEF50279.1| conserved hypothetical protein [Ricinus communis]
Length = 363
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 147/286 (51%), Gaps = 52/286 (18%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
+D ++R + P R+IG +IG+ G ++++R +TK+ I+I + + EERV+ + S
Sbjct: 69 QDVIFRIVVPSRQIGKVIGKVGCRIQKIREETKATIKIADAIARHEERVIIISS------ 122
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD---GGH--QVTAKLLVPSDQIGCVI 155
++ D VS A++AL K+ ++ E+ E S GH T +LL+ Q G +I
Sbjct: 123 --KESDCVVSDAENALKKIATLILKEDESPAESSKVVGAGHLGANTIRLLIAGSQAGSLI 180
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSC--ALRSDELVQISGEASVVKKALCQIASRLH 213
G GQ ++ +R+ +GA I +L LP C A SD +VQISG+ VV KA+ +I +L
Sbjct: 181 GVSGQNIEKLRNSSGATITVLAPNQLPLCASAHESDRVVQISGDVPVVLKAVEEIGCQLR 240
Query: 214 DNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
+NP + IS S + + + V PT P + P T+ D+
Sbjct: 241 ENPPK------QVISISPTYNYATVRPT--------QPYVDP-------TSADY------ 273
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+L ++ +GG+IG+ G+ I++IR ESGA IKV
Sbjct: 274 ----------VTLEMMVSETLVGGLIGRCGSNISRIRNESGAMIKV 309
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 91/175 (52%), Gaps = 10/175 (5%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF-- 338
+++ R+V P IG VIGK G I +IR+E+ A IK+ + ++ +I +SSKE
Sbjct: 68 AQDVIFRIVVPSRQIGKVIGKVGCRIQKIREETKATIKIADAIARHEERVIIISSKESDC 127
Query: 339 ----FEDTLSATIEAVVR--LQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
E+ L +++ P S K+ L + T RLL+ S+ G LIG G I
Sbjct: 128 VVSDAENALKKIATLILKEDESPAESSKVVGAGHLGANTIRLLIAGSQAGSLIGVSGQNI 187
Query: 393 TEMRRLTKANIRILPKENLPKIAS--EDDEMVQISGDLDLAKDALIQVMTRLRAN 445
++R + A I +L LP AS E D +VQISGD+ + A+ ++ +LR N
Sbjct: 188 EKLRNSSGATITVLAPNQLPLCASAHESDRVVQISGDVPVVLKAVEEIGCQLREN 242
>gi|116787223|gb|ABK24418.1| unknown [Picea sitchensis]
gi|224286491|gb|ACN40952.1| unknown [Picea sitchensis]
Length = 481
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 103/178 (57%), Gaps = 12/178 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D V+R L P + +G IIGR GE VK++ +T+S+I+I E + G+ ER V V
Sbjct: 82 PGDNVFRLLVPTQMVGGIIGRKGEFVKKMCEETRSRIKILEGLRGTPERTVMV------- 134
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVI--AEELRGD---EDSDGGHQVTAKLLVPSDQIGCV 154
+A E+ + VSPA D + +VH R+I + RG+ G ++ +LLV Q G +
Sbjct: 135 SAKEEPEAPVSPAMDGILRVHKRIIEGGPDGRGELGRAQQGGSGTISTRLLVAGTQAGSL 194
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
IG+ G ++ I+ +GA +R+L E LP CAL D LV++ GEA V KA+ I S L
Sbjct: 195 IGRQGATIKAIQEGSGAIVRVLAAEDLPFCALADDRLVEVQGEAGSVHKAVELIVSHL 252
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 95/184 (51%), Gaps = 14/184 (7%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ P +GG+IG+ G + ++ +E+ + IK+ + + VS+KE E +S
Sbjct: 87 FRLLVPTQMVGGIIGRKGEFVKKMCEETRSRIKILEGLRGTPERTVMVSAKEEPEAPVSP 146
Query: 346 TIEAVVRLQPRCSEK---------IERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
++ ++R+ R E + G + +TRLLV ++ G LIG+ G+ I ++
Sbjct: 147 AMDGILRVHKRIIEGGPDGRGELGRAQQGGSGTISTRLLVAGTQAGSLIGRQGATIKAIQ 206
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
+ A +R+L E+LP A DD +V++ G+ A+ +++ LR L DR +
Sbjct: 207 EGSGAIVRVLAAEDLPFCALADDRLVEVQGEAGSVHKAVELIVSHLRKFLVDR-----SV 261
Query: 457 VPVF 460
+P+F
Sbjct: 262 LPLF 265
>gi|225463940|ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
Length = 442
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 116/202 (57%), Gaps = 19/202 (9%)
Query: 20 DHGPNKRRYTGDDRDQFIIG--------PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRID 71
D P ++R G D D I G P ++V+R L P +K+GSIIGR GE +K++ +
Sbjct: 19 DSQPQQKR--GRDDDSAIGGGEKRWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEE 76
Query: 72 TKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGD 131
T+++I+I + PG+ ER V V +A E+ D + PA D L KVH R++ + L GD
Sbjct: 77 TRARIKILDGPPGTAERAVMV-------SAKEEPDSSLPPAMDGLLKVHKRIV-DGLEGD 128
Query: 132 EDS-DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
G +V+ +LLV + Q G +IGK G V++I+ + +R+L E LP AL+ D
Sbjct: 129 SSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDR 188
Query: 191 LVQISGEASVVKKALCQIASRL 212
+V++ GE V KA+ IAS L
Sbjct: 189 VVEVVGEPIGVHKAVELIASHL 210
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 95/182 (52%), Gaps = 9/182 (4%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G I +I +E+ A IK+ + + VS+KE + +
Sbjct: 47 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSS 106
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLIS----FTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
L ++ ++++ R + +E DS + +TRLLV S+ G LIGK G + ++
Sbjct: 107 LPPAMDGLLKVHKRIVDGLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEA 166
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVP 458
+ +R+L E+LP A +DD +V++ G+ A+ + + LR L DR + +P
Sbjct: 167 SNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFLVDR-----SVIP 221
Query: 459 VF 460
+F
Sbjct: 222 LF 223
>gi|449531912|ref|XP_004172929.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 453
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 108/175 (61%), Gaps = 10/175 (5%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P ++V+R L P +K+GSIIGR GE +K++ +T+++I+I + PG+ ER V V SA DE
Sbjct: 82 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMV-SAKDEP 140
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGD--EDSDGGHQVTAKLLVPSDQIGCVIGK 157
D PA D L +VH R++ + L GD + G +V+ +LLV + Q G +IGK
Sbjct: 141 ------DSAFPPAVDGLLRVHKRIV-DGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIGK 193
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G V++I+ E+ +R+L E LP AL+ D +V++ G+ + V KA+ IAS L
Sbjct: 194 QGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHL 248
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 92/183 (50%), Gaps = 10/183 (5%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G I +I +E+ A IK+ + + VS+K+ +
Sbjct: 84 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSA 143
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLI-----SFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
++ ++R+ R + +E D+ +TRLLV S+ G LIGK G + ++
Sbjct: 144 FPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIGKQGGTVKSIQE 203
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFV 457
+ +R+L E+LP A +DD +V++ GD A+ + + LR L DR + +
Sbjct: 204 ESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDR-----SII 258
Query: 458 PVF 460
PVF
Sbjct: 259 PVF 261
>gi|296087899|emb|CBI35182.3| unnamed protein product [Vitis vinifera]
Length = 511
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 116/202 (57%), Gaps = 19/202 (9%)
Query: 20 DHGPNKRRYTGDDRDQFIIG--------PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRID 71
D P ++R G D D I G P ++V+R L P +K+GSIIGR GE +K++ +
Sbjct: 88 DSQPQQKR--GRDDDSAIGGGEKRWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEE 145
Query: 72 TKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGD 131
T+++I+I + PG+ ER V V +A E+ D + PA D L KVH R++ + L GD
Sbjct: 146 TRARIKILDGPPGTAERAVMV-------SAKEEPDSSLPPAMDGLLKVHKRIV-DGLEGD 197
Query: 132 EDS-DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
G +V+ +LLV + Q G +IGK G V++I+ + +R+L E LP AL+ D
Sbjct: 198 SSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDR 257
Query: 191 LVQISGEASVVKKALCQIASRL 212
+V++ GE V KA+ IAS L
Sbjct: 258 VVEVVGEPIGVHKAVELIASHL 279
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 95/182 (52%), Gaps = 9/182 (4%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G I +I +E+ A IK+ + + VS+KE + +
Sbjct: 116 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSS 175
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLI----SFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
L ++ ++++ R + +E DS + +TRLLV S+ G LIGK G + ++
Sbjct: 176 LPPAMDGLLKVHKRIVDGLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEA 235
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVP 458
+ +R+L E+LP A +DD +V++ G+ A+ + + LR L DR + +P
Sbjct: 236 SNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFLVDR-----SVIP 290
Query: 459 VF 460
+F
Sbjct: 291 LF 292
>gi|148907101|gb|ABR16694.1| unknown [Picea sitchensis]
Length = 490
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 159/326 (48%), Gaps = 58/326 (17%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P + V+R L P +K+G IIGR GE VK++ +T+S+I+I + + G+ ERVV V
Sbjct: 47 PGENVFRMLVPSQKVGGIIGRKGEFVKKMCEETRSRIKILDGLSGTPERVVMV------- 99
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIA--EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
+A E+ D +SPA D + KVH R+I +E+ + + GG +T +LL+ Q G +IGK
Sbjct: 100 SAKEEPDATISPAMDGILKVHKRIIEGIDEVGRTQQAAGGPTIT-RLLLAGIQSGSLIGK 158
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD--- 214
G +++I+ +G +++ E +P CAL D++++I GE + V KAL + S L
Sbjct: 159 QGATIKSIQENSGVAAKVVGSEDIPYCALADDKVLEIQGEPANVHKALELVVSHLRKFLV 218
Query: 215 ----------NPSRS------QHLLASAISNSHSS----SGSLVGPTAATPIVGIAPLMG 254
N S++ Q+L S++ +S SGS G + P
Sbjct: 219 DRSVLPMYEMNMSKTNQSQMEQNLSHQPWSHNQTSSLPNSGSGFGNNSK-----YTPTAP 273
Query: 255 PYGGYKG------DTAGDWSRSLYSAPRDDLSSK------------EFSLRLVCPVANIG 296
P+ Y +T ++Y RD L + S R+ P++
Sbjct: 274 PHDNYYAPSDLPPETHSHHGLNMYG--RDPLGGHSVPNAAPAPVITQVSQRMQIPLSYAD 331
Query: 297 GVIGKGGAIINQIRQESGAAIKVDSS 322
VIG GA I+ R+ SGA I ++ +
Sbjct: 332 AVIGTNGANISYCRRNSGAIITIEET 357
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 92/172 (53%), Gaps = 5/172 (2%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +GG+IG+ G + ++ +E+ + IK+ + + ++ VS+KE + T
Sbjct: 49 ENVFRMLVPSQKVGGIIGRKGEFVKKMCEETRSRIKILDGLSGTPERVVMVSAKEEPDAT 108
Query: 343 LSATIEAVVRLQPRCSEKIE-----RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
+S ++ ++++ R E I+ + + TRLL+ + G LIGK G+ I ++
Sbjct: 109 ISPAMDGILKVHKRIIEGIDEVGRTQQAAGGPTITRLLLAGIQSGSLIGKQGATIKSIQE 168
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+ +++ E++P A DD++++I G+ AL V++ LR L DR
Sbjct: 169 NSGVAAKVVGSEDIPYCALADDKVLEIQGEPANVHKALELVVSHLRKFLVDR 220
>gi|356530005|ref|XP_003533576.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 385
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 144/290 (49%), Gaps = 61/290 (21%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
+D ++R + P R+IG +IG+ G ++++R DTK+ I+I + + EERV+ + S
Sbjct: 100 QDVIFRIVVPSRQIGKVIGKEGHRIQKIREDTKATIKIADAIARHEERVIIISS------ 153
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA--------KLLVPSDQIG 152
+D D+ V+ A+ AL ++ ++ E D+ S +VTA +LL+ Q G
Sbjct: 154 --KDNDEKVTDAEKALEQIAHLILKE----DDSSLDASKVTAGHVAANTIRLLIAGSQAG 207
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSC--ALRSDELVQISGEASVVKKALCQIAS 210
+IG GQ ++ +R +GA I +L LP C A SD +VQ+SG+ V KAL +I
Sbjct: 208 GLIGMSGQNIEKLRDSSGASITVLAPNQLPLCASAHESDRVVQLSGDVPAVMKALEEIGC 267
Query: 211 RLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRS 270
+L +NP R ++ I+P +++
Sbjct: 268 QLRENPPRQ--------------------------VISISPTY------------NYAAI 289
Query: 271 LYSAPRDDLSSKEF-SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S P D +S ++ + ++ +GG+IG+ G+ I++IR ESGA IKV
Sbjct: 290 RPSQPYLDPTSVDYVTFEMLISETMVGGLIGRCGSNISRIRNESGAMIKV 339
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 19/174 (10%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
R+V P IG VIGK G I +IR+++ A IK+ + ++ +I +SSK+ E A
Sbjct: 104 FRIVVPSRQIGKVIGKEGHRIQKIREDTKATIKIADAIARHEERVIIISSKDNDEKVTDA 163
Query: 346 --TIEAVVRLQPRCSEKIERDSGL----------ISFTTRLLVPTSRIGCLIGKGGSIIT 393
+E + L + E DS L + T RLL+ S+ G LIG G I
Sbjct: 164 EKALEQIAHLILK-----EDDSSLDASKVTAGHVAANTIRLLIAGSQAGGLIGMSGQNIE 218
Query: 394 EMRRLTKANIRILPKENLPKIAS--EDDEMVQISGDLDLAKDALIQVMTRLRAN 445
++R + A+I +L LP AS E D +VQ+SGD+ AL ++ +LR N
Sbjct: 219 KLRDSSGASITVLAPNQLPLCASAHESDRVVQLSGDVPAVMKALEEIGCQLREN 272
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 113/297 (38%), Gaps = 84/297 (28%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
G V +++VPS QIG VIGK G +Q IR +T A I+I + A + ++ IS
Sbjct: 99 GQDVIFRIVVPSRQIGKVIGKEGHRIQKIREDTKATIKIAD-----AIARHEERVIIISS 153
Query: 197 -----EASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
+ + +KAL QIA HL+ +S +S G AA
Sbjct: 154 KDNDEKVTDAEKALEQIA-----------HLILKEDDSSLDASKVTAGHVAAN------- 195
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
++RL+ + GG+IG G I ++R
Sbjct: 196 ---------------------------------TIRLLIAGSQAGGLIGMSGQNIEKLRD 222
Query: 312 ESGAAIKVDSSST----------------EGDDCLITVSSKEFFEDTLSATIEAVVRLQP 355
SGA+I V + + GD + + +E V+ + P
Sbjct: 223 SSGASITVLAPNQLPLCASAHESDRVVQLSGDVPAVMKALEEIGCQLRENPPRQVISISP 282
Query: 356 -------RCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
R S+ + + T +L+ + +G LIG+ GS I+ +R + A I++
Sbjct: 283 TYNYAAIRPSQPYLDPTSVDYVTFEMLISETMVGGLIGRCGSNISRIRNESGAMIKV 339
>gi|334187557|ref|NP_196518.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332004027|gb|AED91410.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 612
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 216/467 (46%), Gaps = 79/467 (16%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVP---------------GS 85
E +R LC + + G +IG+ G +VK+L T+S I + E P GS
Sbjct: 28 EYVTFRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWV-EKTPLDDSPYRIIKIFGHVGS 86
Query: 86 EERV---VTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
RV V V + S+ ++ + VS AQ AL +V + + GD S V+
Sbjct: 87 VSRVKLGVIVNNVSNREKKEQEQEVEVSRAQYALIRVFEALNF----GDCTSS---TVSC 139
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGE-ASVV 201
LL+ + VIGK G+++Q I ETG ++ L+ L C D +++I G S V
Sbjct: 140 NLLMEGSHVVTVIGKNGELMQRILEETGCNVQ-LRSHDLSICTNPGDVVLKIEGNRLSAV 198
Query: 202 KKALCQIASRLHDNPSRSQ-HLLASAISNS-----------------------H---SSS 234
KAL I+SRL P S L A A+ ++ H S
Sbjct: 199 MKALVSISSRLQACPPISTASLHAEAVPDALRRPMEYRSQQYREVDPHGSLHRHVEISQE 258
Query: 235 GSLVGP---TAATPIVGIAPLMGPYGGYKGDTAGDWS-----RSLYSAPRDDLSSKEFSL 286
+LV P T P + P P ++ T+ + + A +DD+ ++ L
Sbjct: 259 DALVRPFFRTITQPRIDYLP--HPSYDHRLITSASKNPPVTIKQPLQASKDDI--RQVDL 314
Query: 287 RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSAT 346
+++C + +++ + R + A+I V + D+ L+T+++ E +D S +
Sbjct: 315 KILCS--------NESASVVIKTRSVTDASISVGDRHPDCDERLVTITAFEKTKDITSES 366
Query: 347 IEAVVRLQPRCSEKIER---DSGLIS-FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKAN 402
A+V + E DSGL S T RL+V +++I CL+G+ G I T +++ T A
Sbjct: 367 QRALVLVFSNMYENATAKVLDSGLTSSITARLVVRSNQINCLLGEEGRIKTTIQQRTGAF 426
Query: 403 IRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
I +L E PK SE++++VQISG+ ++A+ QV + LR +L ++
Sbjct: 427 ITVLNVEQNPKCVSENNQVVQISGEFPNVREAINQVTSMLREDLINQ 473
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 109/234 (46%), Gaps = 15/234 (6%)
Query: 62 GEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHD 121
+V + R T + I +G+ P +ER+VT+ AFE S +Q AL V
Sbjct: 323 ASVVIKTRSVTDASISVGDRHPDCDERLVTI-------TAFEKTKDITSESQRALVLVFS 375
Query: 122 RVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL 181
+ DS +TA+L+V S+QI C++G+ G+I I+ TGA I +L E
Sbjct: 376 NMYENATAKVLDSGLTSSITARLVVRSNQINCLLGEEGRIKTTIQQRTGAFITVLNVEQN 435
Query: 182 PSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS--AISNSHSSSGSLVG 239
P C ++++VQISGE V++A+ Q+ S L ++ S A++ S L
Sbjct: 436 PKCVSENNQVVQISGEFPNVREAINQVTSMLREDLINQSFQRGSQYAVNYSEDPFPELFS 495
Query: 240 PTAA-TPIVGIAPLMGPYGGYKGDTAGD---WSRSLYSAPR--DDLSSKEFSLR 287
PTA TP G + M P + + W +APR +D S FS R
Sbjct: 496 PTAGYTPTFGRSSTMDPNDIFHYSSQASSRLWESPPPAAPRSVNDGSGGLFSTR 549
>gi|308080276|ref|NP_001183239.1| hypothetical protein [Zea mays]
gi|238010240|gb|ACR36155.1| unknown [Zea mays]
gi|414884425|tpg|DAA60439.1| TPA: hypothetical protein ZEAMMB73_126154 [Zea mays]
Length = 647
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 184/398 (46%), Gaps = 56/398 (14%)
Query: 78 IGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDR------VIAEELRGD 131
+G TVP R V S+S E A SPAQ+AL V D + +E RG
Sbjct: 82 VGPTVP---VRRVEASSSSAEPLAL-------SPAQEALVAVIDTEGALCCAVEKEARGK 131
Query: 132 EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH--LPSCALRSD 189
+T LLV +D++ G+G +++ I E GA +R+ E P +
Sbjct: 132 ARPGC---ITCLLLVDADRLEASTGRG--VMERIALEAGADVRVAMWEEGAQPPRGQPLE 186
Query: 190 ELVQISGEASVVKKALCQIASRLH-DNPSRSQHLLASAISNSHS---SSGSLVGPTAATP 245
E+V+I+G+ + V+KAL ++S L D P I NS + GS++ P A++
Sbjct: 187 EVVEITGDRTAVRKALVALSSFLQGDLP----------IGNSTTYVKKEGSIL-PWASSE 235
Query: 246 IVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD---DLSSK---EFSLRLVCPVANIGGVI 299
+ G P MG S + P D SK + S RL+ P GG+I
Sbjct: 236 VPG--PNMGASCSEASTEFAQGSVAKTHCPEGNTGDAQSKTLQQVSFRLLLPTYLAGGLI 293
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE-------FFEDTLSATIEAVVR 352
GK G II I E+GA I V + + +IT+ + E + L + ++
Sbjct: 294 GKKGLIIKGIEVETGACIDVGAPVAGCKERVITICALESPDSEYHIVQSALLLIFDRMME 353
Query: 353 LQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLP 412
++ E+ S F R+LV ++ GCL+G GGSII EM T A I+IL +P
Sbjct: 354 METNTHSTFEKAS---QFLVRVLVLKNQFGCLVGLGGSIIKEMVNTTGARIQILDDTEIP 410
Query: 413 KIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDRE 450
AS + +VQI+G+L ++AL V +LR ++F E
Sbjct: 411 ACASTFELVVQITGELMNIRNALSLVFWKLRNHIFSNE 448
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 120/235 (51%), Gaps = 24/235 (10%)
Query: 12 SHSQTDYAD------HGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
S + T++A H P TGD + + + + +R L P G +IG+ G I+
Sbjct: 246 SEASTEFAQGSVAKTHCPEGN--TGDAQSKTL---QQVSFRLLLPTYLAGGLIGKKGLII 300
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIA 125
K + ++T + I +G V G +ERV+T+ A E D Q AL + DR++
Sbjct: 301 KGIEVETGACIDVGAPVAGCKERVITIC-------ALESPDSEYHIVQSALLLIFDRMME 353
Query: 126 EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
E + Q ++LV +Q GC++G GG I++ + + TGA+I+IL D +P+CA
Sbjct: 354 METNTHSTFEKASQFLVRVLVLKNQFGCLVGLGGSIIKEMVNTTGARIQILDDTEIPACA 413
Query: 186 LRSDELVQISGEASVVKKALCQIASRL------HDNPSRSQHLLASAISNSHSSS 234
+ +VQI+GE ++ AL + +L ++ + H+ +S I+ S+++S
Sbjct: 414 STFELVVQITGELMNIRNALSLVFWKLRNHIFSNETDYNNSHISSSEIAESNATS 468
>gi|357121091|ref|XP_003562255.1| PREDICTED: poly(rC)-binding protein 1-like [Brachypodium
distachyon]
Length = 518
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 110/191 (57%), Gaps = 19/191 (9%)
Query: 24 NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVP 83
N +R+ G P D+V+R L P+ K+G+IIGR GE +K++ ++K++I+I + P
Sbjct: 103 NDKRWPG--------WPGDSVFRILVPVHKVGAIIGRKGEFIKRMCEESKARIKILDGPP 154
Query: 84 GSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVI--AEELRGDEDSDGGHQVT 141
G ER V + SA DE D+ +SPA D L ++H R+ ++ G G
Sbjct: 155 GVPERAVMI-SAKDEP------DEQISPAMDGLLRIHKRIADGSDGEFGQTQRGTGTMGP 207
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVV 201
+LLVP+ Q G +IGK G +++I+ + A +RI+ E++P AL D +V+I GE V
Sbjct: 208 TRLLVPASQAGSLIGKQGATIKSIQDSSKAVVRIV--ENVPPVALNDDRVVEIQGEPLSV 265
Query: 202 KKALCQIASRL 212
+KA+ IAS L
Sbjct: 266 QKAVELIASHL 276
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 101/182 (55%), Gaps = 15/182 (8%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
R++ PV +G +IG+ G I ++ +ES A IK+ + + +S+K+ ++ +S
Sbjct: 116 FRILVPVHKVGAIIGRKGEFIKRMCEESKARIKILDGPPGVPERAVMISAKDEPDEQISP 175
Query: 346 TIEAVVRLQPRCSE-------KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++R+ R ++ + +R +G + TRLLVP S+ G LIGK G+ I ++
Sbjct: 176 AMDGLLRIHKRIADGSDGEFGQTQRGTGTMG-PTRLLVPASQAGSLIGKQGATIKSIQDS 234
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVP 458
+KA +RI+ EN+P +A DD +V+I G+ + A+ + + LR L D + +P
Sbjct: 235 SKAVVRIV--ENVPPVALNDDRVVEIQGEPLSVQKAVELIASHLRKFLVDH-----SVLP 287
Query: 459 VF 460
+F
Sbjct: 288 LF 289
>gi|359479585|ref|XP_002275698.2| PREDICTED: uncharacterized protein LOC100266515 [Vitis vinifera]
Length = 858
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 107/173 (61%), Gaps = 10/173 (5%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P + V+R L P++K+G IIGR GE +K+L +TK++I+I + PG+ ER V V
Sbjct: 37 PGENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMV------- 89
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A E+ D ++PA D L +VH ++ ++ D S G V+ +LLV + Q G +IGK G
Sbjct: 90 SAKEEPDAPIAPAIDGLLRVHKCIM--DVESDVPSAAGVMVSTRLLVVAAQAGSLIGKQG 147
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+++I+ + +R+L E+LP AL++D +V+I GE + V KA+ IAS L
Sbjct: 148 ATIKSIQEASNCIVRVL-GENLPLFALQNDTVVEIQGEPASVHKAVELIASNL 199
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 92/170 (54%), Gaps = 5/170 (2%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ PV +G +IG+ G I ++ +E+ A IK+ + + VS+KE +
Sbjct: 39 ENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPDAP 98
Query: 343 LSATIEAVVRLQPRCSEKIERD---SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
++ I+ ++R+ +C +E D + + +TRLLV ++ G LIGK G+ I ++ +
Sbjct: 99 IAPAIDGLLRVH-KCIMDVESDVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSIQEAS 157
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+R+L ENLP A ++D +V+I G+ A+ + + LR L DR
Sbjct: 158 NCIVRVL-GENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRKFLVDR 206
>gi|147794489|emb|CAN67081.1| hypothetical protein VITISV_007074 [Vitis vinifera]
Length = 534
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 104/175 (59%), Gaps = 9/175 (5%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
G E +R L P +K+GSIIGR GE +K++ +T+++I+I + PG+ ER V V
Sbjct: 124 GLERVFFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMV------ 177
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDS-DGGHQVTAKLLVPSDQIGCVIGK 157
+A E+ D + PA D L KVH R++ + L GD G +V+ +LLV + Q G +IGK
Sbjct: 178 -SAKEEPDSSLPPAMDGLLKVHKRIV-DGLEGDSSHMPPGGKVSTRLLVAASQAGSLIGK 235
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G V++I+ + +R+L E LP AL+ D +V++ GE V KA+ IAS L
Sbjct: 236 QGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHL 290
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 94/179 (52%), Gaps = 9/179 (5%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
R++ P +G +IG+ G I +I +E+ A IK+ + + VS+KE + +L
Sbjct: 130 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSSLPP 189
Query: 346 TIEAVVRLQPRCSEKIERDSGLI----SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
++ ++++ R + +E DS + +TRLLV S+ G LIGK G + ++ +
Sbjct: 190 AMDGLLKVHKRIVDGLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEASNC 249
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
+R+L E+LP A +DD +V++ G+ A+ + + LR L DR + +P+F
Sbjct: 250 IVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFLVDR-----SVIPLF 303
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 30/42 (71%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
DG +V ++LVP+ ++G +IG+ G+ ++ I ET A+I+IL
Sbjct: 123 DGLERVFFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL 164
>gi|224123476|ref|XP_002319087.1| predicted protein [Populus trichocarpa]
gi|222857463|gb|EEE95010.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 103/168 (61%), Gaps = 11/168 (6%)
Query: 48 LCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDK 107
L P +K+GSIIGR GE +K++ +T+++I+I + PG+ ER V V +A E+ D
Sbjct: 2 LVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMV-------SAKEEPDS 54
Query: 108 FVSPAQDALFKVHDRVIAEELRGDEDSD---GGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
+ PA D L +VH R+I + L D + G +V+ +LLVP+ Q G +IGK G V++
Sbjct: 55 SLPPAMDGLLRVHKRII-DGLDSDSSNTPPTSGAKVSTRLLVPASQAGSLIGKQGGTVKS 113
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
I+ + +R+L E LP AL+ D +V++ GEA+ V KA+ IAS L
Sbjct: 114 IQEASTCIVRVLGAEDLPVFALQDDRVVEVLGEAAGVHKAVELIASHL 161
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 93/179 (51%), Gaps = 11/179 (6%)
Query: 288 LVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATI 347
++ P +G +IG+ G I +I +E+ A IK+ + + VS+KE + +L +
Sbjct: 1 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSSLPPAM 60
Query: 348 EAVVRLQPRCSEKIERDSGLISFT------TRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
+ ++R+ R + ++ DS T TRLLVP S+ G LIGK G + ++ +
Sbjct: 61 DGLLRVHKRIIDGLDSDSSNTPPTSGAKVSTRLLVPASQAGSLIGKQGGTVKSIQEASTC 120
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
+R+L E+LP A +DD +V++ G+ A+ + + LR L DR + +P+F
Sbjct: 121 IVRVLGAEDLPVFALQDDRVVEVLGEAAGVHKAVELIASHLRKFLVDR-----SIIPLF 174
>gi|297735516|emb|CBI17956.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 107/173 (61%), Gaps = 10/173 (5%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P + V+R L P++K+G IIGR GE +K+L +TK++I+I + PG+ ER V V
Sbjct: 37 PGENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMV------- 89
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A E+ D ++PA D L +VH ++ ++ D S G V+ +LLV + Q G +IGK G
Sbjct: 90 SAKEEPDAPIAPAIDGLLRVHKCIM--DVESDVPSAAGVMVSTRLLVVAAQAGSLIGKQG 147
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+++I+ + +R+L E+LP AL++D +V+I GE + V KA+ IAS L
Sbjct: 148 ATIKSIQEASNCIVRVL-GENLPLFALQNDTVVEIQGEPASVHKAVELIASNL 199
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 92/170 (54%), Gaps = 5/170 (2%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ PV +G +IG+ G I ++ +E+ A IK+ + + VS+KE +
Sbjct: 39 ENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPDAP 98
Query: 343 LSATIEAVVRLQPRCSEKIERD---SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
++ I+ ++R+ +C +E D + + +TRLLV ++ G LIGK G+ I ++ +
Sbjct: 99 IAPAIDGLLRVH-KCIMDVESDVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSIQEAS 157
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+R+L ENLP A ++D +V+I G+ A+ + + LR L DR
Sbjct: 158 NCIVRVL-GENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRKFLVDR 206
>gi|297833144|ref|XP_002884454.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
gi|297330294|gb|EFH60713.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
Length = 568
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 111/184 (60%), Gaps = 9/184 (4%)
Query: 30 GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERV 89
G + ++ P +TV+R L P +K+GSIIGR G+++K++ +T+++I+I + PG+ ER
Sbjct: 165 GGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERA 224
Query: 90 VTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDE-DSDGGHQVTAKLLVPS 148
V V + E+ + + P+ D L +VH R++ + L G+ + +V+ +LLVP+
Sbjct: 225 VMV-------SGKEEPESSLPPSMDGLLRVHMRIV-DGLDGEPSQAPPASKVSTRLLVPA 276
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI 208
Q G +IGK G V+ I+ + +R+L E LP AL+ D +V++ GE + V KAL I
Sbjct: 277 SQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKALELI 336
Query: 209 ASRL 212
AS L
Sbjct: 337 ASHL 340
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 94/182 (51%), Gaps = 9/182 (4%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G +I +I +E+ A IK+ + + VS KE E +
Sbjct: 177 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 236
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLIS----FTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
L +++ ++R+ R + ++ + +TRLLVP S+ G LIGK G + ++
Sbjct: 237 LPPSMDGLLRVHMRIVDGLDGEPSQAPPASKVSTRLLVPASQAGSLIGKQGGTVKAIQEA 296
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVP 458
+ +R+L E+LP A +DD +V++ G+ AL + + LR L DR + +P
Sbjct: 297 SACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKALELIASHLRKFLVDR-----SIIP 351
Query: 459 VF 460
F
Sbjct: 352 FF 353
>gi|147807331|emb|CAN73002.1| hypothetical protein VITISV_044056 [Vitis vinifera]
Length = 1121
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 107/173 (61%), Gaps = 10/173 (5%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P + V+R L P++K+G IIGR GE +K+L +TK++I+I + PG+ ER V V
Sbjct: 37 PGENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMV------- 89
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A E+ D ++PA D L +VH ++ ++ D S G V+ +LLV + Q G +IGK G
Sbjct: 90 SAKEEPDAPIAPAIDGLLRVHKCIM--DVESDVPSAAGVMVSTRLLVVAAQAGSLIGKQG 147
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+++I+ + +R+L E+LP AL++D +V+I GE + V KA+ IAS L
Sbjct: 148 ATIKSIQEASNCIVRVL-GENLPLFALQNDTVVEIQGEPASVHKAVELIASNL 199
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 91/167 (54%), Gaps = 5/167 (2%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
R++ PV +G +IG+ G I ++ +E+ A IK+ + + VS+KE + ++
Sbjct: 42 FRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPDAPIAP 101
Query: 346 TIEAVVRLQPRCSEKIERD---SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKAN 402
I+ ++R+ +C +E D + + +TRLLV ++ G LIGK G+ I ++ +
Sbjct: 102 AIDGLLRVH-KCIMDVESDVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSIQEASNCI 160
Query: 403 IRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+R+L ENLP A ++D +V+I G+ A+ + + LR L DR
Sbjct: 161 VRVL-GENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRKFLVDR 206
>gi|242038781|ref|XP_002466785.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
gi|241920639|gb|EER93783.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
Length = 430
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 32 DRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVT 91
D D++ P ++V+R L P +K+G+IIGR GE +K++ +TK++I+I + PG ER V
Sbjct: 110 DDDKWPGWPGESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVM 169
Query: 92 VYSASDETNAFEDGDKFVSPAQDALFKVHDRVI--AEELRGDEDSDGGHQVTAKLLVPSD 149
+ SA DE +A +SPA D L +VH R+ + G G+ +LLVPS
Sbjct: 170 I-SAKDEPDA------PLSPAVDGLLRVHKRITDSSNGESGQLQRSAGNIGPTRLLVPSS 222
Query: 150 QIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA 209
Q G +IGK G +++I+ + + +RI+ E++P AL D +V+I GE V+KA+ IA
Sbjct: 223 QAGSLIGKQGATIKSIQDSSKSVVRIV--ENVPPVALNDDRVVEIQGEPLGVQKAVELIA 280
Query: 210 SRL 212
S L
Sbjct: 281 SHL 283
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 103/185 (55%), Gaps = 15/185 (8%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G I ++ +E+ A IK+ + + +S+K+ +
Sbjct: 120 ESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAP 179
Query: 343 LSATIEAVVRLQPRCSE-------KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
LS ++ ++R+ R ++ +++R +G I TRLLVP+S+ G LIGK G+ I +
Sbjct: 180 LSPAVDGLLRVHKRITDSSNGESGQLQRSAGNIG-PTRLLVPSSQAGSLIGKQGATIKSI 238
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVST 455
+ +K+ +RI+ EN+P +A DD +V+I G+ + A+ + + LR L DR +
Sbjct: 239 QDSSKSVVRIV--ENVPPVALNDDRVVEIQGEPLGVQKAVELIASHLRKFLVDR-----S 291
Query: 456 FVPVF 460
+P+F
Sbjct: 292 VLPLF 296
>gi|255557235|ref|XP_002519648.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223541065|gb|EEF42621.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 462
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 166/337 (49%), Gaps = 59/337 (17%)
Query: 122 RVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL 181
RV ++ RG+ D V ++L P + IG VIGK G+++ +IR ET A+++++
Sbjct: 25 RVNDKDERGNND----ELVAYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVVDPFPG 80
Query: 182 PSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS--AISNSHSSSGSLVG 239
P+ D ++ I V KK ++ HD+ Q A+ A+ HS+ + V
Sbjct: 81 PN-----DRVITIY--CYVKKKEDVELDDEFHDH----QPFCAAQDALLRVHSAISNAVS 129
Query: 240 PTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
S+ + R + KE R++ P + +I
Sbjct: 130 ------------------------------SVLDSDRK-MKDKE-ECRILVPSSQSANII 157
Query: 300 GKGGAIINQIRQESGAAIKV--DSSSTEGDDCLITVSSKEFFEDTL-SATIEAVVRLQPR 356
GK G I ++R ++ A IKV +S C + + D L S +EA++ LQ +
Sbjct: 158 GKAGTTIKKLRSKTRATIKVTPKDASDPTHSCAMDFDNFIMSPDDLKSMAVEAILLLQGK 217
Query: 357 CSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIAS 416
+++ D +S RLLVP IGC+IGK GSII E+RR TKA+IRI K PK A
Sbjct: 218 INDE---DDDTVSI--RLLVPCKVIGCIIGKSGSIINEIRRRTKADIRI-SKGQKPKCAD 271
Query: 417 EDDEMVQISGDLDLAKDALIQVMTRLRAN-LFDREGA 452
DE+V++ G++ +DAL+Q++ RLR + L +++G+
Sbjct: 272 SSDELVEVLGEVGSVRDALVQIVLRLRDDALKEKDGS 308
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 144/311 (46%), Gaps = 48/311 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFE-D 104
R L P + +IIG+ G +K+LR T++ I+ VT ASD T++ D
Sbjct: 145 RILVPSSQSANIIGKAGTTIKKLRSKTRATIK------------VTPKDASDPTHSCAMD 192
Query: 105 GDKFV-SPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
D F+ SP V ++ + DED D V+ +LLVP IGC+IGK G I+
Sbjct: 193 FDNFIMSPDDLKSMAVEAILLLQGKINDEDDD---TVSIRLLVPCKVIGCIIGKSGSIIN 249
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ--- 220
IR T A IRI K + P CA SDELV++ GE V+ AL QI RL D+ + +
Sbjct: 250 EIRRRTKADIRISKGQK-PKCADSSDELVEVLGEVGSVRDALVQIVLRLRDDALKEKDGS 308
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPL----------------MGPYGGYKGDTA 264
H + +S + P+ + + + PL GY T
Sbjct: 309 HNPSVGADPLYSGGSGISVPSLLSSVPPVTPLAYDQRPETGSGLGLLSSSNLYGYGSLTM 368
Query: 265 GDWSRSLYSAPRDDLSSKEF-------SLRLVCPVANIGGVIGKGGAIINQIRQESGAAI 317
GD Y + SSK + +L ++ P +G V+GKGGA I IR+ SGA I
Sbjct: 369 GDNG---YDSMSSYSSSKLYGGLPPPSTLEMLVPANAVGKVLGKGGANIANIRKISGAMI 425
Query: 318 KV-DSSSTEGD 327
++ D+ S GD
Sbjct: 426 EISDAKSARGD 436
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 104/195 (53%), Gaps = 13/195 (6%)
Query: 9 GKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQL 68
GKR+ Q D+ D ++ +D+D+ E YR LCP IGS+IG+ G+++ +
Sbjct: 5 GKRNRLQRDHHDGDNKNQKRRVNDKDERGNNDELVAYRILCPDEVIGSVIGKNGKVINSI 64
Query: 69 RIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKF-----VSPAQDALFKVHDRV 123
R +T++K+++ + PG +RV+T+Y + E D+F AQDAL +VH +
Sbjct: 65 RQETRAKVKVVDPFPGPNDRVITIYCYVKKKEDVELDDEFHDHQPFCAAQDALLRVHSAI 124
Query: 124 ---IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KDE 179
++ L D D + ++LVPS Q +IGK G ++ +RS+T A I++ KD
Sbjct: 125 SNAVSSVL--DSDRKMKDKEECRILVPSSQSANIIGKAGTTIKKLRSKTRATIKVTPKDA 182
Query: 180 HLP--SCALRSDELV 192
P SCA+ D +
Sbjct: 183 SDPTHSCAMDFDNFI 197
>gi|15229321|ref|NP_187112.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|6175183|gb|AAF04909.1|AC011437_24 putative RNA-binding protein [Arabidopsis thaliana]
gi|17979249|gb|AAL49941.1| AT3g04610/F7O18_9 [Arabidopsis thaliana]
gi|332640585|gb|AEE74106.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 577
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 113/191 (59%), Gaps = 9/191 (4%)
Query: 23 PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
P + G + ++ P +TV+R L P +K+GSIIGR G+++K++ +T+++I+I +
Sbjct: 167 PEEDATVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGP 226
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVT 141
PG+ ER V V + E+ + + P+ D L +VH R++ + L G+ + +V+
Sbjct: 227 PGTTERAVMV-------SGKEEPESSLPPSMDGLLRVHMRIV-DGLDGEASQAPPPSKVS 278
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVV 201
+LLVP+ Q G +IGK G V+ I+ + +R+L E LP AL+ D +V++ GE + V
Sbjct: 279 TRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSV 338
Query: 202 KKALCQIASRL 212
+AL IAS L
Sbjct: 339 HRALELIASHL 349
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 95/182 (52%), Gaps = 9/182 (4%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G +I +I +E+ A IK+ + + VS KE E +
Sbjct: 186 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 245
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLIS----FTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
L +++ ++R+ R + ++ ++ +TRLLVP S+ G LIGK G + ++
Sbjct: 246 LPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEA 305
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVP 458
+ +R+L E+LP A +DD +V++ G+ AL + + LR L DR + +P
Sbjct: 306 SACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDR-----SIIP 360
Query: 459 VF 460
F
Sbjct: 361 FF 362
>gi|61661324|gb|AAX51268.1| FLK [Arabidopsis thaliana]
gi|61661326|gb|AAX51269.1| FLK [Arabidopsis thaliana]
Length = 577
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 113/191 (59%), Gaps = 9/191 (4%)
Query: 23 PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
P + G + ++ P +TV+R L P +K+GSIIGR G+++K++ +T+++I+I +
Sbjct: 167 PEEDATVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGP 226
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVT 141
PG+ ER V V + E+ + + P+ D L +VH R++ + L G+ + +V+
Sbjct: 227 PGTTERAVMV-------SGKEEPESSLPPSMDGLLRVHMRIV-DGLDGEASQAPPPSKVS 278
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVV 201
+LLVP+ Q G +IGK G V+ I+ + +R+L E LP AL+ D +V++ GE + V
Sbjct: 279 TRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSV 338
Query: 202 KKALCQIASRL 212
+AL IAS L
Sbjct: 339 HRALELIASHL 349
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 95/182 (52%), Gaps = 9/182 (4%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G +I +I +E+ A IK+ + + VS KE E +
Sbjct: 186 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 245
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLIS----FTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
L +++ ++R+ R + ++ ++ +TRLLVP S+ G LIGK G + ++
Sbjct: 246 LPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEA 305
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVP 458
+ +R+L E+LP A +DD +V++ G+ AL + + LR L DR + +P
Sbjct: 306 SACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDR-----SIIP 360
Query: 459 VF 460
F
Sbjct: 361 FF 362
>gi|356573119|ref|XP_003554712.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Glycine max]
Length = 446
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 105/176 (59%), Gaps = 11/176 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P ++V+R L P +K+G IIGR GE +K++ +T+++++I + PG+ +R V +
Sbjct: 44 PGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMI------- 96
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGD---EDSDGGHQVTAKLLVPSDQIGCVIG 156
+A E+ V PA D L +VH R+I + L D S +V+ KLLVP+ Q G +IG
Sbjct: 97 SAKEEPGSSVPPAVDGLLRVHKRII-DGLESDFTHAPSGVAGKVSTKLLVPASQAGSLIG 155
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
K G V++I+ + +R+L E LP AL+ D +V++ G+ + V KAL IAS L
Sbjct: 156 KQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPTGVHKALELIASHL 211
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 94/180 (52%), Gaps = 7/180 (3%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +GG+IG+ G I +I +E+ A +K+ + +S+KE +
Sbjct: 46 ESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISAKEEPGSS 105
Query: 343 LSATIEAVVRLQPRCSEKIERD-----SGLI-SFTTRLLVPTSRIGCLIGKGGSIITEMR 396
+ ++ ++R+ R + +E D SG+ +T+LLVP S+ G LIGK G + ++
Sbjct: 106 VPPAVDGLLRVHKRIIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 165
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
+ +R+L E+LP A +DD +V++ GD AL + + LR L DR G + F
Sbjct: 166 EASNCIVRVLGAEDLPIFALQDDRVVEVVGDPTGVHKALELIASHLRKFLVDR-GVIPIF 224
>gi|302814684|ref|XP_002989025.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
gi|300143126|gb|EFJ09819.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
Length = 1034
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 143/293 (48%), Gaps = 28/293 (9%)
Query: 53 KIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPA 112
KIG +IG+ G +K+LR +T + I+I + + +E+R V + S ++ + + +
Sbjct: 512 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGVSDRSCAELALLEV 571
Query: 113 QDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQ 172
L K D G + G +LL+ Q G +IGK G ++NIR + A
Sbjct: 572 VTILLKDGDGATPSAAIGPQHQ--GSPNLTRLLIAGSQAGSLIGKAGANIKNIRGSSSAS 629
Query: 173 IRILKDEHLPSC--ALRSDELVQISGEASVVKKALCQIASRLHDNP----------SRSQ 220
+R+L + LP C A +D LVQISGE + V+ A+ +A+ L DNP +++
Sbjct: 630 VRVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDNPPKETVPTNPEAKTA 689
Query: 221 HLL------ASAISNSHSSSGSLVGPTAAT-PIVGIA--PLMGPYGGYKGDTAGDWSRSL 271
+ L + HSS ++ G + ++ + G+ PL GP Y G + L
Sbjct: 690 YFLGIDGNTGQQVLLPHSSVAAVYGHSPSSMALYGLQPHPLAGP--AYAGGVLAQ-APPL 746
Query: 272 YSAPRDDLSS--KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
Y+ P L + S + P + +GG+IGKGG I+ +R SGA IKV+ S
Sbjct: 747 YANPAARLPPMLPKVSAEMSVPSSVMGGLIGKGGFHISHMRSVSGATIKVNGS 799
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 82/172 (47%), Gaps = 31/172 (18%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE----------------- 337
IG VIGK G+ I ++R E+GA IK+ +D + +SSK
Sbjct: 513 IGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGVSDRSCAELALLEVV 572
Query: 338 --FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
+D AT A + Q + S + TRLL+ S+ G LIGK G+ I +
Sbjct: 573 TILLKDGDGATPSAAIGPQHQGSPNL----------TRLLIAGSQAGSLIGKAGANIKNI 622
Query: 396 RRLTKANIRILPKENLP--KIASEDDEMVQISGDLDLAKDALIQVMTRLRAN 445
R + A++R+LP + LP A E D +VQISG++ + A+ V LR N
Sbjct: 623 RGSSSASVRVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDN 674
>gi|356505941|ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 443
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 105/176 (59%), Gaps = 11/176 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P ++V+R L P +K+G IIGR GE +K++ +T+++++I + PG+ +R V +
Sbjct: 41 PGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMI------- 93
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGD---EDSDGGHQVTAKLLVPSDQIGCVIG 156
+A E+ V PA D L ++H R+I + L D S +V+ KLLVP+ Q G +IG
Sbjct: 94 SAKEEPGSSVPPAVDGLLRIHKRII-DGLESDFTHAPSGVAGKVSTKLLVPASQAGSLIG 152
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
K G V++I+ + +R+L E LP AL+ D +V++ G+ + V KAL IAS L
Sbjct: 153 KQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPAGVHKALELIASHL 208
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 95/184 (51%), Gaps = 11/184 (5%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +GG+IG+ G I +I +E+ A +K+ + +S+KE +
Sbjct: 43 ESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISAKEEPGSS 102
Query: 343 LSATIEAVVRLQPRCSEKIERD-----SGLI-SFTTRLLVPTSRIGCLIGKGGSIITEMR 396
+ ++ ++R+ R + +E D SG+ +T+LLVP S+ G LIGK G + ++
Sbjct: 103 VPPAVDGLLRIHKRIIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 162
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
+ +R+L E+LP A +DD +V++ GD AL + + LR L DR
Sbjct: 163 EASNCIVRVLGAEDLPIFALQDDRVVEVVGDPAGVHKALELIASHLRKFLVDR-----GV 217
Query: 457 VPVF 460
+P+F
Sbjct: 218 IPIF 221
>gi|302803885|ref|XP_002983695.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
gi|300148532|gb|EFJ15191.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
Length = 1020
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 151/305 (49%), Gaps = 52/305 (17%)
Query: 53 KIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPA 112
KIG +IG+ G +K+LR +T + I+I + + +E+R V + S ++ G + A
Sbjct: 513 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNE-------GGSDRTCA 565
Query: 113 QDALFKVHDRVIAEELRGDEDSDGG---------HQVT---AKLLVPSDQIGCVIGKGGQ 160
+ AL +V ++ +D DG HQ + +LL+ Q G +IGK G
Sbjct: 566 ELALLEVVTILL-------KDGDGATPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGA 618
Query: 161 IVQNIRSETGAQIRILKDEHLPSC--ALRSDELVQISGEASVVKKALCQIASRLHDNP-- 216
++NIR + A +R+L + LP C A +D LVQISGE + V+ A+ +A+ L DNP
Sbjct: 619 NIKNIRGSSSASVRVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDNPPK 678
Query: 217 --------SRSQHLL------ASAISNSHSSSGSLVGPTAAT-PIVGIA--PLMGPYGGY 259
+++ + L + HSS ++ G + ++ + G+ PL GP Y
Sbjct: 679 ETVPTTPEAKTAYFLGIDGKTGQQVLLPHSSVAAVYGHSPSSMALYGLQPHPLAGP--AY 736
Query: 260 KGDTAGDWSRSLYSAPRDDLSS--KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAI 317
G + LY+ P L + S + P + +GG+IGKGG I+ +R SGA I
Sbjct: 737 AGGVLAQ-APPLYANPAARLPPMLPKVSAEMSVPSSVMGGLIGKGGFHISHMRSVSGATI 795
Query: 318 KVDSS 322
KV+ S
Sbjct: 796 KVNGS 800
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 82/173 (47%), Gaps = 31/173 (17%)
Query: 294 NIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE---------------- 337
IG VIGK G+ I ++R E+GA IK+ +D + +SSK
Sbjct: 513 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGGSDRTCAELALLEV 572
Query: 338 ---FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITE 394
+D AT A + Q + S + TRLL+ S+ G LIGK G+ I
Sbjct: 573 VTILLKDGDGATPSAAIGPQHQGSPNL----------TRLLIAGSQAGSLIGKAGANIKN 622
Query: 395 MRRLTKANIRILPKENLP--KIASEDDEMVQISGDLDLAKDALIQVMTRLRAN 445
+R + A++R+LP + LP A E D +VQISG++ + A+ V LR N
Sbjct: 623 IRGSSSASVRVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDN 675
>gi|297601352|ref|NP_001050707.2| Os03g0627500 [Oryza sativa Japonica Group]
gi|255674723|dbj|BAF12621.2| Os03g0627500, partial [Oryza sativa Japonica Group]
Length = 512
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 106/175 (60%), Gaps = 11/175 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P ++V+R L P +K+G+IIGR GE +K++ ++K++I+I + PG ER V + SA DE
Sbjct: 107 PGESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMI-SAKDEP 165
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVI--AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
D +SPA D LF+V+ R+ ++ G + + + +LLVP+ Q G +IGK
Sbjct: 166 ------DAPISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGK 219
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G +++I+ + + +RI+ E LP AL D +V+I GE V+KAL IAS L
Sbjct: 220 QGATIKSIQDSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHL 272
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 97/184 (52%), Gaps = 13/184 (7%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G I ++ +ES A IK+ + + +S+K+ +
Sbjct: 109 ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAP 168
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLISFT------TRLLVPTSRIGCLIGKGGSIITEMR 396
+S ++ + R+ R ++ + DSG TRLLVP S+ G LIGK G+ I ++
Sbjct: 169 ISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQ 228
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
+K+ +RI+ E LP +A DD +V+I G+ + AL + + LR L DR +
Sbjct: 229 DSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFLVDR-----SV 281
Query: 457 VPVF 460
+P+F
Sbjct: 282 LPLF 285
>gi|16924113|gb|AAL31692.1|AC092390_13 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709929|gb|ABF97724.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|215695360|dbj|BAG90551.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625405|gb|EEE59537.1| hypothetical protein OsJ_11804 [Oryza sativa Japonica Group]
Length = 510
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 106/175 (60%), Gaps = 11/175 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P ++V+R L P +K+G+IIGR GE +K++ ++K++I+I + PG ER V + SA DE
Sbjct: 105 PGESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMI-SAKDEP 163
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVI--AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
D +SPA D LF+V+ R+ ++ G + + + +LLVP+ Q G +IGK
Sbjct: 164 ------DAPISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGK 217
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G +++I+ + + +RI+ E LP AL D +V+I GE V+KAL IAS L
Sbjct: 218 QGATIKSIQDSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHL 270
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 97/184 (52%), Gaps = 13/184 (7%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G I ++ +ES A IK+ + + +S+K+ +
Sbjct: 107 ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAP 166
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLISFT------TRLLVPTSRIGCLIGKGGSIITEMR 396
+S ++ + R+ R ++ + DSG TRLLVP S+ G LIGK G+ I ++
Sbjct: 167 ISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQ 226
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
+K+ +RI+ E LP +A DD +V+I G+ + AL + + LR L DR +
Sbjct: 227 DSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFLVDR-----SV 279
Query: 457 VPVF 460
+P+F
Sbjct: 280 LPLF 283
>gi|357157425|ref|XP_003577794.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 527
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 105/175 (60%), Gaps = 11/175 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P ++V+R L P++K+G++IGR GE +K++ +++++I+I + PG ER V + SA DE
Sbjct: 123 PGESVFRVLVPVQKVGAVIGRKGEFIKKMCEESRARIKILDGPPGVPERAVMI-SAKDEP 181
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVI-AEELRGDEDSDGGHQV-TAKLLVPSDQIGCVIGK 157
+A VSPA D L +VH R+ + D+ G V +LLVP+ Q G +IGK
Sbjct: 182 DA------LVSPAVDGLLRVHKRITDGLDSETDQPQRGAGPVGPTRLLVPASQAGSLIGK 235
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G +++I+ + +RIL E++P AL D +V+I GE V KA+ IAS L
Sbjct: 236 QGATIKSIQDASKCALRIL--ENVPPVALNDDRVVEIQGEPLDVHKAVELIASHL 288
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 104/186 (55%), Gaps = 17/186 (9%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ PV +G VIG+ G I ++ +ES A IK+ + + +S+K+ +
Sbjct: 125 ESVFRVLVPVQKVGAVIGRKGEFIKKMCEESRARIKILDGPPGVPERAVMISAKDEPDAL 184
Query: 343 LSATIEAVVRLQPRCSEKI-------ERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
+S ++ ++R+ R ++ + +R +G + TRLLVP S+ G LIGK G+ I +
Sbjct: 185 VSPAVDGLLRVHKRITDGLDSETDQPQRGAGPVG-PTRLLVPASQAGSLIGKQGATIKSI 243
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGD-LDLAKDALIQVMTRLRANLFDREGAVS 454
+ +K +RIL EN+P +A DD +V+I G+ LD+ K A+ + + LR L DR
Sbjct: 244 QDASKCALRIL--ENVPPVALNDDRVVEIQGEPLDVHK-AVELIASHLRKFLVDR----- 295
Query: 455 TFVPVF 460
+ +P+F
Sbjct: 296 SVLPLF 301
>gi|218193355|gb|EEC75782.1| hypothetical protein OsI_12699 [Oryza sativa Indica Group]
Length = 510
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 106/175 (60%), Gaps = 11/175 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P ++V+R L P +K+G+IIGR GE +K++ ++K++I+I + PG ER V + SA DE
Sbjct: 105 PGESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMI-SAKDEP 163
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVI--AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
D +SPA D LF+V+ R+ ++ G + + + +LLVP+ Q G +IGK
Sbjct: 164 ------DAPISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGK 217
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G +++I+ + + +RI+ E LP AL D +V+I GE V+KAL IAS L
Sbjct: 218 QGATIKSIQDSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHL 270
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 97/184 (52%), Gaps = 13/184 (7%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G I ++ +ES A IK+ + + +S+K+ +
Sbjct: 107 ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAP 166
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLISFT------TRLLVPTSRIGCLIGKGGSIITEMR 396
+S ++ + R+ R ++ + DSG TRLLVP S+ G LIGK G+ I ++
Sbjct: 167 ISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQ 226
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
+K+ +RI+ E LP +A DD +V+I G+ + AL + + LR L DR +
Sbjct: 227 DSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFLVDR-----SV 279
Query: 457 VPVF 460
+P+F
Sbjct: 280 LPLF 283
>gi|3548819|gb|AAC34491.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 155
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 91/144 (63%), Gaps = 13/144 (9%)
Query: 76 IRIGETVPGSEERVVTVYSASDETNAFEDGDK-FVSPAQDALFKVHD-------RVIAEE 127
+R+ E +PG +ERVVT+YS S+E N ED ++ FV PA DALFKVHD +
Sbjct: 1 MRVNEALPGCDERVVTIYSNSEERNRIEDDNEDFVCPAFDALFKVHDMVVVEEFDDDDDY 60
Query: 128 LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR 187
DE S+G VT ++LVPSDQIG +IGKGG I+Q +R++T AQIR+ ++++LP C +
Sbjct: 61 NDNDEYSEGQTVVTVRMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRV-RNDNLPMCTEK 119
Query: 188 SDELVQIS----GEASVVKKALCQ 207
+ ++ + G ++VK C
Sbjct: 120 ARTILMVQRNLLGMKTMVKWYDCH 143
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 366 GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQIS 425
G T R+LVP+ +IG LIGKGG II +R T A IR+ +NLP + ++ +
Sbjct: 69 GQTVVTVRMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRV-RNDNLPMCTEKARTILMVQ 127
Query: 426 GDL 428
+L
Sbjct: 128 RNL 130
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTV 92
R L P +IG +IG+GG I++ LR DT ++IR+ + +P E+ T+
Sbjct: 76 RMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRVRNDNLPMCTEKARTI 123
>gi|226497902|ref|NP_001151605.1| nucleic acid binding protein [Zea mays]
gi|195648058|gb|ACG43497.1| nucleic acid binding protein [Zea mays]
Length = 524
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 106/182 (58%), Gaps = 25/182 (13%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P ++V+R L P +K+G+IIGR GE +K++ +TK++I+I + PG ER V + SA DE
Sbjct: 118 PGESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMI-SAKDEP 176
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG---------GHQVTAKLLVPSDQ 150
D +SPA D L +VH R+ + SDG G+ +LLVPS Q
Sbjct: 177 ------DAPLSPAMDGLLRVHKRIT-------DSSDGESSQPQRSAGNIGPTRLLVPSSQ 223
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
G +IGK G +++I+ + + +RI+ E++P AL D +V+I GE V+KA+ I+S
Sbjct: 224 AGSLIGKQGATIKSIQDSSKSIVRIV--ENVPPVALNDDRVVEIQGEPLGVQKAVELISS 281
Query: 211 RL 212
L
Sbjct: 282 HL 283
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 101/185 (54%), Gaps = 15/185 (8%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G I ++ +E+ A IK+ + + +S+K+ +
Sbjct: 120 ESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAP 179
Query: 343 LSATIEAVVRLQPRC-------SEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
LS ++ ++R+ R S + +R +G I TRLLVP+S+ G LIGK G+ I +
Sbjct: 180 LSPAMDGLLRVHKRITDSSDGESSQPQRSAGNIG-PTRLLVPSSQAGSLIGKQGATIKSI 238
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVST 455
+ +K+ +RI+ EN+P +A DD +V+I G+ + A+ + + LR L DR +
Sbjct: 239 QDSSKSIVRIV--ENVPPVALNDDRVVEIQGEPLGVQKAVELISSHLRKFLVDR-----S 291
Query: 456 FVPVF 460
+P+F
Sbjct: 292 VLPLF 296
>gi|108709930|gb|ABF97725.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 389
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 107/175 (61%), Gaps = 11/175 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P ++V+R L P +K+G+IIGR GE +K++ ++K++I+I + PG ER V + SA DE
Sbjct: 105 PGESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMI-SAKDEP 163
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVI--AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
+A +SPA D LF+V+ R+ ++ G + + + +LLVP+ Q G +IGK
Sbjct: 164 DA------PISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGK 217
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G +++I+ + + +RI+ E LP AL D +V+I GE V+KAL IAS L
Sbjct: 218 QGATIKSIQDSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHL 270
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 97/184 (52%), Gaps = 13/184 (7%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G I ++ +ES A IK+ + + +S+K+ +
Sbjct: 107 ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAP 166
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLISFT------TRLLVPTSRIGCLIGKGGSIITEMR 396
+S ++ + R+ R ++ + DSG TRLLVP S+ G LIGK G+ I ++
Sbjct: 167 ISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQ 226
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
+K+ +RI+ E LP +A DD +V+I G+ + AL + + LR L DR +
Sbjct: 227 DSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFLVDR-----SV 279
Query: 457 VPVF 460
+P+F
Sbjct: 280 LPLF 283
>gi|147789222|emb|CAN69137.1| hypothetical protein VITISV_022037 [Vitis vinifera]
Length = 587
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 107/183 (58%), Gaps = 7/183 (3%)
Query: 18 YADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIR 77
YA +G +KR G +R LC +IG +IG+ G IVKQL+ DT ++IR
Sbjct: 28 YAPNGSSKRSKPPPPPIPVPAG--HVAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIR 85
Query: 78 IGETVPGSEERVVTVYSAS--DETNAFEDGDKFV--SPAQDALFKVHDRVIAEELRGDED 133
+ ++ S+ RV+ V + + + A + + V S AQ+A+ +V +R++ D
Sbjct: 86 VEDSPSTSDHRVILVIAPASVNRRIALQGSSEEVEASAAQEAVLRVFERILEVAAVVDGV 145
Query: 134 SDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
GG V+ +LL + Q+G VIGKGG++V+ IR E+G++I++L E LP+CA +DE+V+
Sbjct: 146 PPGG-VVSCRLLAETSQVGSVIGKGGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVE 204
Query: 194 ISG 196
SG
Sbjct: 205 HSG 207
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 90/162 (55%), Gaps = 20/162 (12%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV----------- 333
+ RL+C + IGGVIGK G I+ Q++ ++GA I+V+ S + D +I V
Sbjct: 52 AFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRIA 111
Query: 334 ---SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS---FTTRLLVPTSRIGCLIGK 387
SS+E SA EAV+R+ R E G+ + RLL TS++G +IGK
Sbjct: 112 LQGSSEEV---EASAAQEAVLRVFERILEVAAVVDGVPPGGVVSCRLLAETSQVGSVIGK 168
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
GG ++ ++RR + + I++L E LP A+ DEMV+ SG L+
Sbjct: 169 GGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEHSGSLE 210
>gi|413933627|gb|AFW68178.1| nucleic acid binding protein [Zea mays]
Length = 637
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 32 DRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVT 91
D +++ P ++V+R L P +K+G+IIGR GE +K++ +TK++I+I + PG ER V
Sbjct: 220 DDNKWPGWPGESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVM 279
Query: 92 VYSASDETNAFEDGDKFVSPAQDALFKVHDRVI--AEELRGDEDSDGGHQVTAKLLVPSD 149
+ SA DE +A +SPA D L +VH R+ ++ G+ +LLVPS
Sbjct: 280 I-SAKDEPDA------PLSPAMDGLLRVHKRITDSSDGESSQPQRSAGNIGPTRLLVPSS 332
Query: 150 QIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA 209
Q G +IGK G +++I+ + + +RI+ E++P AL D +V+I GE V++A+ I+
Sbjct: 333 QAGSLIGKQGATIKSIQDSSKSIVRIV--ENVPPVALNDDRVVEIQGEPLGVQEAVELIS 390
Query: 210 SRL 212
S L
Sbjct: 391 SHL 393
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 102/185 (55%), Gaps = 15/185 (8%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G I ++ +E+ A IK+ + + +S+K+ +
Sbjct: 230 ESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAP 289
Query: 343 LSATIEAVVRLQPRC-------SEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
LS ++ ++R+ R S + +R +G I TRLLVP+S+ G LIGK G+ I +
Sbjct: 290 LSPAMDGLLRVHKRITDSSDGESSQPQRSAGNIG-PTRLLVPSSQAGSLIGKQGATIKSI 348
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVST 455
+ +K+ +RI+ EN+P +A DD +V+I G+ ++A+ + + LR L DR +
Sbjct: 349 QDSSKSIVRIV--ENVPPVALNDDRVVEIQGEPLGVQEAVELISSHLRKFLVDR-----S 401
Query: 456 FVPVF 460
+P+F
Sbjct: 402 VLPLF 406
>gi|255574127|ref|XP_002527979.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223532605|gb|EEF34391.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 416
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 103/178 (57%), Gaps = 13/178 (7%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D VYR + P+ K+GSIIGR GE++K++ ++T+++IRI + P +R+V +
Sbjct: 24 PGDNVYRLIVPVAKVGSIIGRKGELIKKMCVETRARIRILDGPPSISDRIVLI------- 76
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA-----KLLVPSDQIGCV 154
+ E+ + +SPA DA+ +V RV G+ D+ G A KLLV S Q +
Sbjct: 77 SGKEEPEAALSPAMDAVLRVFKRVSGLS-AGEADAMGSAVAGAAFSSVKLLVASSQAINL 135
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
IGK G +++I+ T A +R+L +E PS A + +V+I GEAS V KAL + +L
Sbjct: 136 IGKQGSTIKSIQESTAATVRVLAEEEAPSYATSDERIVEIHGEASKVLKALEGVIGQL 193
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 23/206 (11%)
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
T G W P D++ RL+ PVA +G +IG+ G +I ++ E+ A I++
Sbjct: 16 TEGKWP----GWPGDNV------YRLIVPVAKVGSIIGRKGELIKKMCVETRARIRILDG 65
Query: 323 STEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCS--EKIERDS------GLISFTTRL 374
D ++ +S KE E LS ++AV+R+ R S E D+ G + +L
Sbjct: 66 PPSISDRIVLISGKEEPEAALSPAMDAVLRVFKRVSGLSAGEADAMGSAVAGAAFSSVKL 125
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
LV +S+ LIGK GS I ++ T A +R+L +E P A+ D+ +V+I G+ A
Sbjct: 126 LVASSQAINLIGKQGSTIKSIQESTAATVRVLAEEEAPSYATSDERIVEIHGEASKVLKA 185
Query: 435 LIQVMTRLRANLFDREGAVSTFVPVF 460
L V+ +LR L D T VP+F
Sbjct: 186 LEGVIGQLRKFLVDH-----TVVPIF 206
>gi|302816563|ref|XP_002989960.1| hypothetical protein SELMODRAFT_428421 [Selaginella moellendorffii]
gi|300142271|gb|EFJ08973.1| hypothetical protein SELMODRAFT_428421 [Selaginella moellendorffii]
Length = 393
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 159/353 (45%), Gaps = 81/353 (22%)
Query: 23 PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
P +R++ G P D V+R + P+ K+G+IIGR GE VK++ +T+S+I+I + V
Sbjct: 37 PGERKWPG--------WPGDNVFRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGV 88
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
PG+ ER+V V +A ED + +SPA D L +VH RV E S G +
Sbjct: 89 PGTLERIVLV-------SAKEDPEATISPAMDGLLRVHRRV-------TEGSSGDGEPVE 134
Query: 143 KLLVPSDQIGCVIGKGGQIVQN--IRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
+++PS +VQ+ + + T A I + E LP CAL D +V++ GE
Sbjct: 135 HIILPSG-----------LVQSRLLVTATQAGSLIGRQEELPLCALADDRMVEVQGEILK 183
Query: 201 VKKALCQIASRLHD-----------------NPSRS----------QHLLASAISNSHSS 233
V+KA+ + S L SRS Q ++S + ++
Sbjct: 184 VQKAMELVVSHLRKFLVDRSVLQLFEFNVSFAGSRSIGYKVHNGELQRAMSSQVQGQQAA 243
Query: 234 SGSLVGPTAATPIVGIAPLMGPYGG--YKGDTAGD--WSRSLYSAP--RDDLSS------ 281
+ + + ATP V PY Y D A ++ S+Y R D++S
Sbjct: 244 A---IATSWATPTVAAT---TPYSSTDYYADQAQSQHYAVSMYGGDPGRVDVTSTTPAPP 297
Query: 282 -KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
+ S +L P+ +IG GA IN +R+ SGA I + + + I V
Sbjct: 298 AESVSQQLQVPLLYADAIIGTAGANINYMRRTSGATISIQETPNAPGEMTIEV 350
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 32/174 (18%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ P+ +G +IG+ G + ++ +E+ + IK+ + ++ VS+KE E T+S
Sbjct: 51 FRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGVPGTLERIVLVSAKEDPEATISP 110
Query: 346 TIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
++ ++R+ R +E D SGL+ +RLLV ++ G LIG+
Sbjct: 111 AMDGLLRVHRRVTEGSSGDGEPVEHIILPSGLVQ--SRLLVTATQAGSLIGR-------- 160
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+E LP A DD MV++ G++ + A+ V++ LR L DR
Sbjct: 161 ------------QEELPLCALADDRMVEVQGEILKVQKAMELVVSHLRKFLVDR 202
>gi|302770987|ref|XP_002968912.1| hypothetical protein SELMODRAFT_409630 [Selaginella moellendorffii]
gi|300163417|gb|EFJ30028.1| hypothetical protein SELMODRAFT_409630 [Selaginella moellendorffii]
Length = 393
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 155/353 (43%), Gaps = 81/353 (22%)
Query: 23 PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
P +R++ G P D V+R + P+ K+G+IIGR GE VK++ +T+S+I+I + V
Sbjct: 37 PGERKWPG--------WPGDNVFRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGV 88
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
PG+ ER+V V +A ED + +SPA D L +VH RV E S G +
Sbjct: 89 PGTLERIVLV-------SAKEDPEATISPAMDGLLRVHRRV-------TEGSSGDGEPVE 134
Query: 143 KLLVPSDQIGCVIGKGGQIVQN--IRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
+++PS +VQ+ + + T A I + E LP CAL D +V++ GE
Sbjct: 135 HIILPSG-----------LVQSRLLVTATQAGSLIGRQEELPLCALADDRMVEVQGEILK 183
Query: 201 VKKALCQIASRLHD-----------------NPSRS----------QHLLASAISNSHSS 233
V+KA+ + S L SRS Q ++S + ++
Sbjct: 184 VQKAMELVVSHLRKFLVDRSVLQLFEFNVSFAGSRSIGYKVHNGELQRAMSSQVQGQQAA 243
Query: 234 SGSLVGPTAATPIVGIAPLMGPYGG--YKGDTA-----------GDWSRSLYSAPRDDLS 280
+ + + ATP V PY Y D A GD R ++
Sbjct: 244 A---IATSWATPTVAAT---TPYSSTDYYADQAQSQHYAVSVYGGDPGRVDVTSTTPAAP 297
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
++ S +L P+ +IG GA IN +R+ SGA I + + + I V
Sbjct: 298 AETVSQQLQVPLLYADAIIGTAGANINYMRRTSGATISIQETPNAPGEMTIEV 350
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 32/174 (18%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ P+ +G +IG+ G + ++ +E+ + IK+ + ++ VS+KE E T+S
Sbjct: 51 FRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGVPGTLERIVLVSAKEDPEATISP 110
Query: 346 TIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
++ ++R+ R +E D SGL+ +RLLV ++ G LIG+
Sbjct: 111 AMDGLLRVHRRVTEGSSGDGEPVEHIILPSGLVQ--SRLLVTATQAGSLIGR-------- 160
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+E LP A DD MV++ G++ + A+ V++ LR L DR
Sbjct: 161 ------------QEELPLCALADDRMVEVQGEILKVQKAMELVVSHLRKFLVDR 202
>gi|412992928|emb|CCO16461.1| predicted protein [Bathycoccus prasinos]
Length = 703
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 107/186 (57%), Gaps = 14/186 (7%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAF 102
+YR LCP + GS+IG+ GE VKQL+ D+ +KI++ V + ERV+ + A D
Sbjct: 266 LYRLLCPNARAGSVIGKNGEKVKQLQRDSGAKIKVEPPVDSTIAERVIAI-EAQDV---- 320
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELR----GDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
D +P+Q AL ++ + ++ + R G + + GH + +LL+PS QI VIG+
Sbjct: 321 -DDPTVWAPSQIALLRIVETIVLDAERNTTIGAAEENNGH-IVIRLLLPSSQIRNVIGRF 378
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA-SVVKKALCQIASRLH-DNP 216
G +++ IR +G+ +R+L P CA R+DE++QIS E+ V AL I ++L D P
Sbjct: 379 GNVIERIRVGSGSHVRVLPSSETPRCAKRNDEVLQISAESMENVASALAMITTQLRLDPP 438
Query: 217 SRSQHL 222
R+ L
Sbjct: 439 VRAHEL 444
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 104/185 (56%), Gaps = 16/185 (8%)
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV----DSSSTEGD 327
Y P + +++ RL+CP A G VIGK G + Q++++SGA IKV DS+ E
Sbjct: 253 YRMPENHGATRTLLYRLLCPNARAGSVIGKNGEKVKQLQRDSGAKIKVEPPVDSTIAER- 311
Query: 328 DCLITVSSKEFFEDTLSATIE-AVVRLQPRCSEKIERDSGLIS-------FTTRLLVPTS 379
+I + +++ + T+ A + A++R+ ER++ + + RLL+P+S
Sbjct: 312 --VIAIEAQDVDDPTVWAPSQIALLRIVETIVLDAERNTTIGAAEENNGHIVIRLLLPSS 369
Query: 380 RIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD-LDLAKDALIQV 438
+I +IG+ G++I +R + +++R+LP P+ A +DE++QIS + ++ AL +
Sbjct: 370 QIRNVIGRFGNVIERIRVGSGSHVRVLPSSETPRCAKRNDEVLQISAESMENVASALAMI 429
Query: 439 MTRLR 443
T+LR
Sbjct: 430 TTQLR 434
>gi|326505208|dbj|BAK02991.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 513
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 109/185 (58%), Gaps = 12/185 (6%)
Query: 30 GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERV 89
G+D+ ++ P D+V+R L P +K+G+IIGR GE +K++ +K++I+I + PG ER
Sbjct: 102 GEDK-RWPGWPGDSVFRILVPAQKVGAIIGRKGEFIKKMCEQSKARIKILDGPPGVTERA 160
Query: 90 VTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVI--AEELRGDEDSDGGHQVTAKLLVP 147
V + SA DE D+ +SPA D L ++H R+ ++ G + +LLVP
Sbjct: 161 VII-SAKDEP------DEPISPAMDGLLRIHKRITDGSDGEFGQPQRGASNVGPTRLLVP 213
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQ 207
+ Q G +IGK G +++I+ + + +RI+ E++P AL D +V+I GE V KA+
Sbjct: 214 ASQAGSLIGKQGATIKSIQDSSKSVVRIV--ENVPPVALNDDRVVEIQGEPLGVHKAVEL 271
Query: 208 IASRL 212
IA+ L
Sbjct: 272 IANHL 276
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 95/181 (52%), Gaps = 13/181 (7%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
R++ P +G +IG+ G I ++ ++S A IK+ + + +S+K+ ++ +S
Sbjct: 116 FRILVPAQKVGAIIGRKGEFIKKMCEQSKARIKILDGPPGVTERAVIISAKDEPDEPISP 175
Query: 346 TIEAVVRLQPRCSEKIERDSGLISF------TTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
++ ++R+ R ++ + + G TRLLVP S+ G LIGK G+ I ++ +
Sbjct: 176 AMDGLLRIHKRITDGSDGEFGQPQRGASNVGPTRLLVPASQAGSLIGKQGATIKSIQDSS 235
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPV 459
K+ +RI+ EN+P +A DD +V+I G+ A+ + LR L D + +P+
Sbjct: 236 KSVVRIV--ENVPPVALNDDRVVEIQGEPLGVHKAVELIANHLRKFLVDH-----SVLPL 288
Query: 460 F 460
F
Sbjct: 289 F 289
>gi|147855522|emb|CAN83854.1| hypothetical protein VITISV_031103 [Vitis vinifera]
Length = 321
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 120/229 (52%), Gaps = 35/229 (15%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
DH KRR +D ++R + P R+IG +IG+ G ++++R +TK+ I+I
Sbjct: 47 DHRSPKRRAKN----------QDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIA 96
Query: 80 ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG--- 136
+ + EERV+ + S +D + +S A++AL + ++ E+ D ++D
Sbjct: 97 DAIARHEERVIIISS--------KDSENVISDAENALLQXASLILKED---DSNTDALKV 145
Query: 137 --GHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR--SDE 190
GH V +LL+ Q GC+IG GQ ++ +R+ +GA I IL LP CA SD
Sbjct: 146 GVGHVVANAIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDR 205
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVG 239
+VQISG+ V KAL +I +L R+ +L A ++ + +LVG
Sbjct: 206 MVQISGDVPAVLKALEEIGCQL-----RTTNLAADYVTLNMMIPETLVG 249
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 10/200 (5%)
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
+ +P+ +++ R+V P IG VIGK G+ I +IR+E+ A IK+ + ++ +I
Sbjct: 48 HRSPKRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVI 107
Query: 332 TVSSKEF------FEDTLSATIEAVVRLQPRCSEKIERDSG-LISFTTRLLVPTSRIGCL 384
+SSK+ E+ L +++ ++ ++ G +++ RLL+ S+ GCL
Sbjct: 108 IISSKDSENVISDAENALLQXASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQAGCL 167
Query: 385 IGKGGSIITEMRRLTKANIRILPKENLPKIAS--EDDEMVQISGDLDLAKDALIQVMTRL 442
IG G I ++R + A I ILP+ LP AS + D MVQISGD+ AL ++ +L
Sbjct: 168 IGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQL 227
Query: 443 R-ANLFDREGAVSTFVPVFL 461
R NL ++ +P L
Sbjct: 228 RTTNLAADYVTLNMMIPETL 247
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 43/234 (18%)
Query: 124 IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPS 183
+A++ R + V +++VPS QIG VIGK G +Q IR ET A I+I +
Sbjct: 44 VADDHRSPKRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIAD-----A 98
Query: 184 CALRSDELVQISGEASV-----VKKALCQIASR-LHDNPSRSQ-------HLLASAISN- 229
A + ++ IS + S + AL Q AS L ++ S + H++A+AI
Sbjct: 99 IARHEERVIIISSKDSENVISDAENALLQXASLILKEDDSNTDALKVGVGHVVANAIRLL 158
Query: 230 -SHSSSGSLVGPT---------AATPIVGIAPLMG-PYGGYKGDT------AGDWSRSLY 272
+ S +G L+G + ++ + I P P D+ +GD L
Sbjct: 159 IAGSQAGCLIGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLK 218
Query: 273 SAPR-------DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+ +L++ +L ++ P +GG+IG+ G+ I++IR ESGA IKV
Sbjct: 219 ALEEIGCQLRTTNLAADYVTLNMMIPETLVGGLIGRCGSNISRIRNESGAMIKV 272
>gi|449463577|ref|XP_004149510.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 3-like
[Cucumis sativus]
Length = 468
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 112/197 (56%), Gaps = 11/197 (5%)
Query: 16 TDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSK 75
+D A H P+ +TG ++ P D V+R + P+ K+GSIIGR G+++K++ +T+++
Sbjct: 56 SDSAAHEPSN--HTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRAR 113
Query: 76 IRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
IR+ + G+ +RVV + + E+ + +SPA DA+ +V RV L +ED
Sbjct: 114 IRVLDGAVGTPDRVVLI-------SGKEELESPLSPAMDAVIRVFKRVSG--LSENEDEA 164
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
+ +LLV S Q +IGK G ++++I+ TGA +R+L + +P A + +V++
Sbjct: 165 KASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQ 224
Query: 196 GEASVVKKALCQIASRL 212
GE+ V KAL + L
Sbjct: 225 GESLKVLKALEGVVGHL 241
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 97/177 (54%), Gaps = 7/177 (3%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ PV +G +IG+ G +I ++ +E+ A I+V + D ++ +S KE E LS
Sbjct: 83 FRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESPLSP 142
Query: 346 TIEAVVRLQPRCSEKIE-RDSGLISF-TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
++AV+R+ R S E D SF + RLLV +++ LIGK GS+I ++ T A++
Sbjct: 143 AMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASV 202
Query: 404 RILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
R+L + +P A D+ MV++ G+ AL V+ LR L D + +P+F
Sbjct: 203 RVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDH-----SVLPLF 254
>gi|116784616|gb|ABK23409.1| unknown [Picea sitchensis]
Length = 407
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 146/312 (46%), Gaps = 34/312 (10%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
D V+R + KIG +IG+ G + QLR DT ++I+I + V E+RV+ + S +E
Sbjct: 92 DIVFRIVVASNKIGKVIGKQGSKINQLREDTGARIKIADPVTPLEDRVIIISSKGEEEEE 151
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA----KLLVPSDQIGCVIGK 157
S A+ AL ++ ++ E + G + +LL+ Q G +IG
Sbjct: 152 -------TSAAEQALIQIATVILEESGESSATAKVGTRHVGPNMMRLLIAGSQAGSLIGA 204
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRS--DELVQISGEASVVKKALCQIASRLHDN 215
G+ ++ IR+++GA I+IL P CA S D LVQISGE S V KAL I L ++
Sbjct: 205 SGKTIKEIRNDSGATIKILPQNLSPICASASETDRLVQISGEVSQVLKALDHIGVTLREH 264
Query: 216 PSRSQ-HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
P R + + ++G +V P P Y G++ + + A
Sbjct: 265 PPREVISTRPTYYAGLSPANGLMVLPQTVLP---------GYNMQTGNSNYSYLGAAGRA 315
Query: 275 PRDDLSSK----EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCL 330
+S+ + ++ + P + GGVIGK G I+QIR SGA +KV E D
Sbjct: 316 AGGTISAAFALPKVTVEMKIPSSVAGGVIGKRGDNISQIRSLSGAIVKVIG---EKDGAT 372
Query: 331 ITVSSKEFFEDT 342
T+ FFE T
Sbjct: 373 RTI----FFEGT 380
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 92/173 (53%), Gaps = 12/173 (6%)
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFED 341
++ R+V IG VIGK G+ INQ+R+++GA IK+ T +D +I +SSK E+
Sbjct: 91 RDIVFRIVVASNKIGKVIGKQGSKINQLREDTGARIKIADPVTPLEDRVIIISSKGEEEE 150
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTT--------RLLVPTSRIGCLIGKGGSIIT 393
SA +A++++ E+ S T RLL+ S+ G LIG G I
Sbjct: 151 ETSAAEQALIQIATVILEESGESSATAKVGTRHVGPNMMRLLIAGSQAGSLIGASGKTIK 210
Query: 394 EMRRLTKANIRILPKENLPKI---ASEDDEMVQISGDLDLAKDALIQVMTRLR 443
E+R + A I+ILP +NL I ASE D +VQISG++ AL + LR
Sbjct: 211 EIRNDSGATIKILP-QNLSPICASASETDRLVQISGEVSQVLKALDHIGVTLR 262
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 77/192 (40%), Gaps = 68/192 (35%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
G + +++V S++IG VIGK G + +R +TGA+I+I P L D ++ IS
Sbjct: 90 GRDIVFRIVVASNKIGKVIGKQGSKINQLREDTGARIKIAD----PVTPLE-DRVIIISS 144
Query: 197 EA------SVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVG-- 248
+ S ++AL QIA+ + + G ++AT VG
Sbjct: 145 KGEEEEETSAAEQALIQIATVILEES----------------------GESSATAKVGTR 182
Query: 249 -IAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
+ P M +RL+ + G +IG G I
Sbjct: 183 HVGPNM--------------------------------MRLLIAGSQAGSLIGASGKTIK 210
Query: 308 QIRQESGAAIKV 319
+IR +SGA IK+
Sbjct: 211 EIRNDSGATIKI 222
>gi|124359391|gb|ABN05855.1| KH, type 1 [Medicago truncatula]
Length = 222
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 111/198 (56%), Gaps = 13/198 (6%)
Query: 21 HGPNKRRYTGDDRDQFIIGPEDTV-YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
+G +KR Q + P V +R LC +IG +IG+ G ++K L++ T +KIRI
Sbjct: 25 NGSSKRAKPSKPPQQPLPIPAGHVAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIE 84
Query: 80 ETVPGSEERVVTVYSASDETNAFE------DGDKF-VSPAQDALFKVHDRV--IAEELRG 130
++ S +RV+ V AS+ DG+ VS AQ+AL +V DR+ +A E+ G
Sbjct: 85 DSPNESPDRVIMVIGASNIDGKVMVRSHSGDGEAIEVSKAQEALLRVFDRILEVAAEMEG 144
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
E D V+ +L+ S Q G VIGKGG++V+ I+ +TG +I + KD +LP+C DE
Sbjct: 145 IELGD--RTVSCRLVADSAQAGSVIGKGGKVVEKIKKDTGCKIWVCKD-NLPACISSPDE 201
Query: 191 LVQISGEASVVKKALCQI 208
+++ S S+ A+ +I
Sbjct: 202 VIECSASRSMFGSAVTRI 219
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 86/173 (49%), Gaps = 19/173 (10%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT-- 342
+ RL+C + IGGVIGK G +I ++ +GA I+++ S E D +I V +
Sbjct: 49 AFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGASNIDGKVM 108
Query: 343 ------------LSATIEAVVRLQPRCSEKIERDSGL----ISFTTRLLVPTSRIGCLIG 386
+S EA++R+ R E G+ + + RL+ +++ G +IG
Sbjct: 109 VRSHSGDGEAIEVSKAQEALLRVFDRILEVAAEMEGIELGDRTVSCRLVADSAQAGSVIG 168
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVM 439
KGG ++ ++++ T I + K+NLP S DE+++ S + A+ +++
Sbjct: 169 KGGKVVEKIKKDTGCKIWVC-KDNLPACISSPDEVIECSASRSMFGSAVTRIV 220
>gi|225445949|ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g18375 isoform 1 [Vitis
vinifera]
Length = 466
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 104/177 (58%), Gaps = 11/177 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D V+R + P+ K+GSIIGR GE++K++ +T+++IR+ + G+ +R+V +
Sbjct: 75 PGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIVLI------- 127
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIA-EELRGDEDSDGGHQV---TAKLLVPSDQIGCVI 155
+ E+ + +SPA DA+ +V RV E GD + G V + +LLV S Q +I
Sbjct: 128 SGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGKAYGAAGVAFCSIRLLVASTQAINLI 187
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
GK G ++++I+ TGA +R+L + +P A + +V++ GEA V+KAL + L
Sbjct: 188 GKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQGEALKVQKALEAVVGHL 244
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 100/183 (54%), Gaps = 13/183 (7%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ PV +G +IG+ G +I ++ +E+ A I+V + D ++ +S +E E LS
Sbjct: 80 FRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIVLISGREEPEAPLSP 139
Query: 346 TIEAVVRLQPRCSEKIERD--------SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
++AV+R+ R + E + +G+ + RLLV +++ LIGK GS+I ++
Sbjct: 140 AMDAVIRVFKRVTGLSESEGDGKAYGAAGVAFCSIRLLVASTQAINLIGKQGSLIKSIQE 199
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFV 457
T A++R+L + +P A+ D+ +V++ G+ + AL V+ LR L D + +
Sbjct: 200 STGASVRVLSGDEVPFYAAADERIVELQGEALKVQKALEAVVGHLRKFLVDH-----SVL 254
Query: 458 PVF 460
P+F
Sbjct: 255 PLF 257
>gi|326488325|dbj|BAJ93831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 520
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 101/175 (57%), Gaps = 11/175 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P ++V+R L +K+G++IGR GE +K++ ++K++I+I + PG ER V + SA DE
Sbjct: 117 PGESVFRVLVSTQKVGALIGRKGEFIKRMCDESKARIKILDGPPGVPERAVMI-SAKDEP 175
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVI-AEELRGDEDSDGGHQV-TAKLLVPSDQIGCVIGK 157
D V PA D L +VH+R+ + D+ G +LLVP+ Q G +IGK
Sbjct: 176 ------DALVPPAIDVLLRVHNRITDGLDSETDQAQKGASPAGPTRLLVPASQAGSLIGK 229
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G +++I+ + +RIL E++P AL D +V+I GE V KA+ IA+ L
Sbjct: 230 QGTTIKSIQDASKCALRIL--ENVPPVALNDDRVVEIQGEPHDVHKAVELIANHL 282
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 94/184 (51%), Gaps = 13/184 (7%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ +G +IG+ G I ++ ES A IK+ + + +S+K+ +
Sbjct: 119 ESVFRVLVSTQKVGALIGRKGEFIKRMCDESKARIKILDGPPGVPERAVMISAKDEPDAL 178
Query: 343 LSATIEAVVRLQPRCSEKIERDS------GLISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
+ I+ ++R+ R ++ ++ ++ + TRLLVP S+ G LIGK G+ I ++
Sbjct: 179 VPPAIDVLLRVHNRITDGLDSETDQAQKGASPAGPTRLLVPASQAGSLIGKQGTTIKSIQ 238
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
+K +RIL EN+P +A DD +V+I G+ A+ + LR L DR +
Sbjct: 239 DASKCALRIL--ENVPPVALNDDRVVEIQGEPHDVHKAVELIANHLRKFLVDR-----SV 291
Query: 457 VPVF 460
+P+F
Sbjct: 292 LPLF 295
>gi|108862919|gb|ABA99242.2| FLK, putative, expressed [Oryza sativa Japonica Group]
gi|222617409|gb|EEE53541.1| hypothetical protein OsJ_36750 [Oryza sativa Japonica Group]
Length = 517
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 106/184 (57%), Gaps = 13/184 (7%)
Query: 32 DRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVT 91
D ++ P ++V+R L P +K+G++IGR GE +K++ +++++I++ + PG +R V
Sbjct: 104 DEKKWPGWPGESVFRILVPAQKVGAVIGRKGEFIKKMCEESRARIKVLDGPPGVPDRAVM 163
Query: 92 VYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD---GGHQVTAKLLVPS 148
+ SA DE +A + PA D L +VH R I + L G+ D G +LLVP+
Sbjct: 164 I-SAKDEPDA------PLPPAVDGLLRVHKR-ITDGLDGESDQPQRAAGTVGPTRLLVPA 215
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI 208
Q G +IGK G +++I+ + +RIL E +P AL D +V+I GE V KA+ I
Sbjct: 216 SQAGSLIGKQGATIKSIQDASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDVHKAVELI 273
Query: 209 ASRL 212
AS L
Sbjct: 274 ASHL 277
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 102/186 (54%), Gaps = 17/186 (9%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G VIG+ G I ++ +ES A IKV D + +S+K+ +
Sbjct: 114 ESVFRILVPAQKVGAVIGRKGEFIKKMCEESRARIKVLDGPPGVPDRAVMISAKDEPDAP 173
Query: 343 LSATIEAVVRLQPRC-------SEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
L ++ ++R+ R S++ +R +G + TRLLVP S+ G LIGK G+ I +
Sbjct: 174 LPPAVDGLLRVHKRITDGLDGESDQPQRAAGTVG-PTRLLVPASQAGSLIGKQGATIKSI 232
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGD-LDLAKDALIQVMTRLRANLFDREGAVS 454
+ +K +RIL E++P +A DD +V+I G+ LD+ K A+ + + LR L DR
Sbjct: 233 QDASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDVHK-AVELIASHLRKFLVDR----- 284
Query: 455 TFVPVF 460
+ +P+F
Sbjct: 285 SVLPLF 290
>gi|376338927|gb|AFB33992.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338929|gb|AFB33993.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338931|gb|AFB33994.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338933|gb|AFB33995.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
Length = 86
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
TT+LL+P+++ GCL+GKGG+II+EMR+ T+ANIRILPKE+LP A + DEMVQI GD+
Sbjct: 3 ITTKLLIPSNQTGCLLGKGGAIISEMRKQTRANIRILPKEDLPPCALDSDEMVQIVGDIR 62
Query: 430 LAKDALIQVMTRLRANLFDREGAVS 454
A+ AL+QV +RLR+ RE +S
Sbjct: 63 AARAALVQVTSRLRS-FIHREIGIS 86
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 52/74 (70%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T KLL+PS+Q GC++GKGG I+ +R +T A IRIL E LP CAL SDE+VQI G+
Sbjct: 3 ITTKLLIPSNQTGCLLGKGGAIISEMRKQTRANIRILPKEDLPPCALDSDEMVQIVGDIR 62
Query: 200 VVKKALCQIASRLH 213
+ AL Q+ SRL
Sbjct: 63 AARAALVQVTSRLR 76
>gi|7671433|emb|CAB89374.1| putative protein [Arabidopsis thaliana]
Length = 567
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 214/471 (45%), Gaps = 83/471 (17%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVP---------------GS 85
E +R LC + + G +IG+ G +VK+L T+S I + E P GS
Sbjct: 28 EYVTFRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWV-EKTPLDDSPYRIIKIFGHVGS 86
Query: 86 EERV---VTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
RV V V + S+ ++ + VS AQ AL +V + + GD S V+
Sbjct: 87 VSRVKLGVIVNNVSNREKKEQEQEVEVSRAQYALIRVFEALNF----GDCTSS---TVSC 139
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR----SDELVQISGE- 197
LL+ + VIGK G+++Q I ETG ++K S + R + +I G
Sbjct: 140 NLLMEGSHVVTVIGKNGELMQRILEETGCN-SLIKALLFGSSSCRIIHGTYARDKIEGNR 198
Query: 198 ASVVKKALCQIASRLHDNPSRSQ-HLLASAISNS-----------------------H-- 231
S V KAL I+SRL P S L A A+ ++ H
Sbjct: 199 LSAVMKALVSISSRLQACPPISTASLHAEAVPDALRRPMEYRSQQYREVDPHGSLHRHVE 258
Query: 232 -SSSGSLVGP---TAATPIVGIAPLMGPYGGYKGDTAGDWS-----RSLYSAPRDDLSSK 282
S +LV P T P + P P ++ T+ + + A +DD+ +
Sbjct: 259 ISQEDALVRPFFRTITQPRIDYLP--HPSYDHRLITSASKNPPVTIKQPLQASKDDI--R 314
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
+ L+++C + +++ + R + A+I V + D+ L+T+++ E +D
Sbjct: 315 QVDLKILCS--------NESASVVIKTRSVTDASISVGDRHPDCDERLVTITAFEKTKDI 366
Query: 343 LSATIEAVVRLQPRCSEKIER---DSGLIS-FTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
S + A+V + E DSGL S T RL+V +++I CL+G+ G I T +++
Sbjct: 367 TSESQRALVLVFSNMYENATAKVLDSGLTSSITARLVVRSNQINCLLGEEGRIKTTIQQR 426
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
T A I +L E PK SE++++VQISG+ ++A+ QV + LR +L ++
Sbjct: 427 TGAFITVLNVEQNPKCVSENNQVVQISGEFPNVREAINQVTSMLREDLINQ 477
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 103/220 (46%), Gaps = 12/220 (5%)
Query: 59 GRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFK 118
+V + R T + I +G+ P +ER+VT+ AFE S +Q AL
Sbjct: 324 NESASVVIKTRSVTDASISVGDRHPDCDERLVTI-------TAFEKTKDITSESQRALVL 376
Query: 119 VHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD 178
V + DS +TA+L+V S+QI C++G+ G+I I+ TGA I +L
Sbjct: 377 VFSNMYENATAKVLDSGLTSSITARLVVRSNQINCLLGEEGRIKTTIQQRTGAFITVLNV 436
Query: 179 EHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS--AISNSHSSSGS 236
E P C ++++VQISGE V++A+ Q+ S L ++ S A++ S
Sbjct: 437 EQNPKCVSENNQVVQISGEFPNVREAINQVTSMLREDLINQSFQRGSQYAVNYSEDPFPE 496
Query: 237 LVGPTAA-TPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
L PTA TP G + M P + + S L+ +P
Sbjct: 497 LFSPTAGYTPTFGRSSTMDPNDIFHYSSQA--SSRLWESP 534
>gi|449445515|ref|XP_004140518.1| PREDICTED: poly(rC)-binding protein 2-like [Cucumis sativus]
gi|449529952|ref|XP_004171961.1| PREDICTED: poly(rC)-binding protein 2-like [Cucumis sativus]
Length = 276
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 114/212 (53%), Gaps = 11/212 (5%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
D ++R + P ++IG +IG+ G ++++R +TK+ I+I + V EERV+ + S+ D N
Sbjct: 67 HDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVI-IISSKDNEN 125
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV--TAKLLVPSDQIGCVIGKG 158
+ D +K + + K D EEL+ GH T +LL+ Q G +IG
Sbjct: 126 SVTDAEKALQQIAALILK-EDGSSIEELK----VGTGHVAANTIRLLIAGSQAGSLIGAS 180
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSC--ALRSDELVQISGEASVVKKALCQIASRLHDNP 216
GQ ++ +R+ +GA I IL LP C A SD +VQISG+ V KAL +I ++L NP
Sbjct: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP 240
Query: 217 SRSQHLLASAIS-NSHSSSGSLVGPTAATPIV 247
R ++ + N+ S + PT+ PI+
Sbjct: 241 PRQVISVSPTYNYNTMHPPQSYMDPTSGKPIL 272
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 95/182 (52%), Gaps = 9/182 (4%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
SAP+ + + R+V P IG VIGK G I ++R+E+ A IK+ + ++ +I
Sbjct: 58 SAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVII 117
Query: 333 VSSKEF------FEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT-RLLVPTSRIGCLI 385
+SSK+ E L +++ E+++ +G ++ T RLL+ S+ G LI
Sbjct: 118 ISSKDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLI 177
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIAS--EDDEMVQISGDLDLAKDALIQVMTRLR 443
G G I ++R + A+I IL LP AS E D +VQISGD+ AL ++ +LR
Sbjct: 178 GASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLR 237
Query: 444 AN 445
N
Sbjct: 238 VN 239
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS- 195
H V +++VPS QIG VIGK G +Q +R ET A I+I + A + ++ IS
Sbjct: 66 AHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIAD-----AVARYEERVIIISS 120
Query: 196 --GEASVV--KKALCQIAS 210
E SV +KAL QIA+
Sbjct: 121 KDNENSVTDAEKALQQIAA 139
>gi|356528013|ref|XP_003532600.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 167
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 96/151 (63%), Gaps = 10/151 (6%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LC ++G+IIG+ G ++K L+ T +KIRI + P S +RV+ V + S ED
Sbjct: 27 FRLLCHASRVGAIIGKSGVLIKSLQEATGAKIRIVDAPPDSPDRVILVSAPS----VTED 82
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
G+ +S AQ+AL KV DRV+ + G E D V+ +LL + Q+G VIGK G++V+
Sbjct: 83 GE--LSTAQEALLKVFDRVL-DVAAGTEVGD--LVVSCRLLAETSQVGAVIGKAGKVVEK 137
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQIS 195
IR +TG +IR+L +E LP+ SDE+V++S
Sbjct: 138 IRMDTGCKIRVL-NEGLPAGTAPSDEIVEVS 167
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 83/147 (56%), Gaps = 3/147 (2%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
+ + RL+C + +G +IGK G +I +++ +GA I++ + + D +I VS+ E
Sbjct: 22 TTHVTFRLLCHASRVGAIIGKSGVLIKSLQEATGAKIRIVDAPPDSPDRVILVSAPSVTE 81
Query: 341 D-TLSATIEAVVRLQPRCSEKIE-RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
D LS EA++++ R + + G + + RLL TS++G +IGK G ++ ++R
Sbjct: 82 DGELSTAQEALLKVFDRVLDVAAGTEVGDLVVSCRLLAETSQVGAVIGKAGKVVEKIRMD 141
Query: 399 TKANIRILPKENLPKIASEDDEMVQIS 425
T IR+L E LP + DE+V++S
Sbjct: 142 TGCKIRVL-NEGLPAGTAPSDEIVEVS 167
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL--KDEHLPSCALRSDELVQISG 196
VT +LL + ++G +IGK G ++++++ TGA+IRI+ + L S V G
Sbjct: 24 HVTFRLLCHASRVGAIIGKSGVLIKSLQEATGAKIRIVDAPPDSPDRVILVSAPSVTEDG 83
Query: 197 EASVVKKALCQIASRLHD 214
E S ++AL ++ R+ D
Sbjct: 84 ELSTAQEALLKVFDRVLD 101
>gi|413955216|gb|AFW87865.1| nucleic acid binding protein [Zea mays]
Length = 441
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 100/178 (56%), Gaps = 12/178 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D+V+R + P+ K+GSIIGR GE++K+L TK+++RI E G+ ER+V V
Sbjct: 37 PGDSVFRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLV------- 89
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIA---EELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
+ ED +SPA DAL +V RVI G + + A+LLVP Q +IG
Sbjct: 90 SGKEDPGLELSPAMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIG 149
Query: 157 KGGQIVQNIRSETGAQIRILK-DEHLPSCALRSDE-LVQISGEASVVKKALCQIASRL 212
K G ++ I+ TGA IR++ DEH + DE +V+I G+ V KAL +++ L
Sbjct: 150 KQGATIKAIQESTGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHL 207
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 90/184 (48%), Gaps = 14/184 (7%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RLV PV +G +IG+ G +I ++ + + A +++ + ++ VS KE LS
Sbjct: 42 FRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVSGKEDPGLELSP 101
Query: 346 TIEAVVRLQPR-------CSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++A++R+ R +E + + RLLVP ++ LIGK G+ I ++
Sbjct: 102 AMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGATIKAIQES 161
Query: 399 TKANIRILP--KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
T A IR++ + P ++D+ +V+I GD + AL V LR L D +
Sbjct: 162 TGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLVDH-----SV 216
Query: 457 VPVF 460
+P+F
Sbjct: 217 LPLF 220
>gi|356530338|ref|XP_003533739.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 443
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 110/193 (56%), Gaps = 18/193 (9%)
Query: 23 PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
P ++R+ G P D V+R + P+ K+GSIIGR GE++K++ +T+S+IR+ +
Sbjct: 41 PPEKRWPG--------WPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAP 92
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV--IAEELRGDEDSDGGHQV 140
G+ +R+V V + ED + +SPA DA+ ++ RV +E +++S G
Sbjct: 93 LGTPDRIVLV-------SGKEDPEAALSPAMDAVVRIFKRVSGFSETDAENQESAAGLAF 145
Query: 141 TA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
++ +LLV S Q +IGK G ++++I+ T A +R+L + + A ++ +V+I GEA
Sbjct: 146 SSIRLLVASTQAINLIGKQGSLIKSIQENTSASVRVLSGDEVQFYATANERIVEIQGEAL 205
Query: 200 VVKKALCQIASRL 212
V KAL + L
Sbjct: 206 KVLKALEAVVGHL 218
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 98/182 (53%), Gaps = 12/182 (6%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ PV +G +IG+ G +I ++ +E+ + I+V + D ++ VS KE E LS
Sbjct: 55 FRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKEDPEAALSP 114
Query: 346 TIEAVVRLQPRCS-------EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++AVVR+ R S E E +GL + RLLV +++ LIGK GS+I ++
Sbjct: 115 AMDAVVRIFKRVSGFSETDAENQESAAGLAFSSIRLLVASTQAINLIGKQGSLIKSIQEN 174
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVP 458
T A++R+L + + A+ ++ +V+I G+ AL V+ LR L D + +P
Sbjct: 175 TSASVRVLSGDEVQFYATANERIVEIQGEALKVLKALEAVVGHLRKFLVDH-----SVLP 229
Query: 459 VF 460
+F
Sbjct: 230 LF 231
>gi|226502036|ref|NP_001148766.1| nucleic acid binding protein [Zea mays]
gi|195621990|gb|ACG32825.1| nucleic acid binding protein [Zea mays]
Length = 441
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 100/178 (56%), Gaps = 12/178 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D+V+R + P+ K+GSIIGR GE++K+L TK+++RI E G+ ER+V V
Sbjct: 37 PGDSVFRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLV------- 89
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIA---EELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
+ ED +SPA DAL +V RVI G + + A+LLVP Q +IG
Sbjct: 90 SGKEDPGLELSPAMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIG 149
Query: 157 KGGQIVQNIRSETGAQIRILK-DEHLPSCALRSDE-LVQISGEASVVKKALCQIASRL 212
K G ++ I+ TGA IR++ DEH + DE +V+I G+ V KAL +++ L
Sbjct: 150 KQGATIKAIQESTGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHL 207
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 90/184 (48%), Gaps = 14/184 (7%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RLV PV +G +IG+ G +I ++ + + A +++ + ++ VS KE LS
Sbjct: 42 FRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVSGKEDPGLELSP 101
Query: 346 TIEAVVRLQPR-------CSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++A++R+ R +E + + RLLVP ++ LIGK G+ I ++
Sbjct: 102 AMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGATIKAIQES 161
Query: 399 TKANIRILP--KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
T A IR++ + P ++D+ +V+I GD + AL V LR L D +
Sbjct: 162 TGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLVDH-----SV 216
Query: 457 VPVF 460
+P+F
Sbjct: 217 LPLF 220
>gi|356556240|ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 442
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 113/205 (55%), Gaps = 18/205 (8%)
Query: 12 SHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRID 71
+ S A P ++R+ G P D V+R + P+ K+GSIIGR GE++K++ +
Sbjct: 29 TESNAAAAASTPPEKRWPG--------WPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEE 80
Query: 72 TKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV--IAEELR 129
T+S+IR+ + G+ +R+V V + E+ + +SPA DA+ ++ RV ++E
Sbjct: 81 TRSRIRVLDAPLGTPDRIVLV-------SGKEEPEAALSPAMDAVVRIFKRVSGLSETDA 133
Query: 130 GDEDSDGGHQV-TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRS 188
+++S G + +LLV S Q +IGK G ++++I+ T A +R+L + + S A
Sbjct: 134 ENKESAAGLAFCSIRLLVASTQAINLIGKQGSLIKSIQENTSASVRVLSGDEVQSYATVD 193
Query: 189 DELVQISGEASVVKKALCQIASRLH 213
+ +V+I GEA V KAL + L
Sbjct: 194 ERIVEIQGEALKVLKALEAVVGHLR 218
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 98/182 (53%), Gaps = 12/182 (6%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ PV +G +IG+ G +I ++ +E+ + I+V + D ++ VS KE E LS
Sbjct: 54 FRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKEEPEAALSP 113
Query: 346 TIEAVVRLQPRCS-------EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++AVVR+ R S E E +GL + RLLV +++ LIGK GS+I ++
Sbjct: 114 AMDAVVRIFKRVSGLSETDAENKESAAGLAFCSIRLLVASTQAINLIGKQGSLIKSIQEN 173
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVP 458
T A++R+L + + A+ D+ +V+I G+ AL V+ LR L D + +P
Sbjct: 174 TSASVRVLSGDEVQSYATVDERIVEIQGEALKVLKALEAVVGHLRKFLVDH-----SVLP 228
Query: 459 VF 460
+F
Sbjct: 229 LF 230
>gi|361066701|gb|AEW07662.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158160|gb|AFG61426.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158161|gb|AFG61427.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158162|gb|AFG61428.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158163|gb|AFG61429.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158164|gb|AFG61430.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158166|gb|AFG61432.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158167|gb|AFG61433.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158168|gb|AFG61434.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158169|gb|AFG61435.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158170|gb|AFG61436.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158171|gb|AFG61437.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158172|gb|AFG61438.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158173|gb|AFG61439.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158174|gb|AFG61440.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158175|gb|AFG61441.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158176|gb|AFG61442.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158177|gb|AFG61443.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 82/123 (66%), Gaps = 6/123 (4%)
Query: 103 EDGDKF--VSPAQDALFKVHDRVIAEE---LRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
EDGD+ + PAQDAL +VH VIA+E D D+D Q A+LLV + QIG +IGK
Sbjct: 8 EDGDENEPICPAQDALLRVHS-VIAQESSVKDKDNDADKKGQQNARLLVANSQIGSLIGK 66
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GG +Q +R+E+GAQI+I + + LP CA DELV ISG+A VKKAL +++ L+ +P
Sbjct: 67 GGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDAKAVKKALYSVSAFLYKHPP 126
Query: 218 RSQ 220
+ Q
Sbjct: 127 KEQ 129
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 42/72 (58%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
RLLV S+IG LIGKGG+ I +MR + A I+I K+ LP A DE+V ISGD
Sbjct: 50 NARLLVANSQIGSLIGKGGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDAKA 109
Query: 431 AKDALIQVMTRL 442
K AL V L
Sbjct: 110 VKKALYSVSAFL 121
>gi|414867775|tpg|DAA46332.1| TPA: nucleic acid binding protein [Zea mays]
Length = 448
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 12/178 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D+V+R + P+ K+GSIIGR GE++K+L +TK+++RI E G+ ER+V V
Sbjct: 43 PGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLV------- 95
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIA---EELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
+ ED D + PA DAL +V RV G + + A+LLVP Q +IG
Sbjct: 96 SGKEDPDLELPPAMDALMRVFKRVTGITDGAAEGTQAAATPDVCAARLLVPGAQAINLIG 155
Query: 157 KGGQIVQNIRSETGAQIRILK-DEHLPSCALRSDE-LVQISGEASVVKKALCQIASRL 212
K G ++ I+ T A IR++ DEH + DE +V+I G+ V KAL +++ L
Sbjct: 156 KQGATIKAIQESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHL 213
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 14/184 (7%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RLV PV +G +IG+ G +I ++ +E+ A +++ + ++ VS KE + L
Sbjct: 48 FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPDLELPP 107
Query: 346 TIEAVVRLQPR-------CSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++A++R+ R +E + + RLLVP ++ LIGK G+ I ++
Sbjct: 108 AMDALMRVFKRVTGITDGAAEGTQAAATPDVCAARLLVPGAQAINLIGKQGATIKAIQES 167
Query: 399 TKANIRILP--KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
T A IR++ + P ++D+ +V+I GD + AL V LR L D +
Sbjct: 168 TSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLVDH-----SV 222
Query: 457 VPVF 460
+P+F
Sbjct: 223 LPLF 226
>gi|219888687|gb|ACL54718.1| unknown [Zea mays]
Length = 448
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 12/178 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D+V+R + P+ K+GSIIGR GE++K+L +TK+++RI E G+ ER+V V
Sbjct: 43 PGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLV------- 95
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIA---EELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
+ ED D + PA DAL +V RV G + + A+LLVP Q +IG
Sbjct: 96 SGKEDPDLELPPAMDALMRVFKRVTGITDGAAEGTQAAATPDVCAARLLVPGAQAINLIG 155
Query: 157 KGGQIVQNIRSETGAQIRILK-DEHLPSCALRSDE-LVQISGEASVVKKALCQIASRL 212
K G ++ I+ T A IR++ DEH + DE +V+I G+ V KAL +++ L
Sbjct: 156 KQGATIKAIQESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHL 213
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 14/184 (7%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RLV PV +G +IG+ G +I ++ +E+ A +++ + ++ VS KE + L
Sbjct: 48 FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPDLELPP 107
Query: 346 TIEAVVRLQPR-------CSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++A++R+ R +E + + RLLVP ++ LIGK G+ I ++
Sbjct: 108 AMDALMRVFKRVTGITDGAAEGTQAAATPDVCAARLLVPGAQAINLIGKQGATIKAIQES 167
Query: 399 TKANIRILP--KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
T A IR++ + P ++D+ +V+I GD + AL V LR L D +
Sbjct: 168 TSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLVDH-----SV 222
Query: 457 VPVF 460
+P+F
Sbjct: 223 LPLF 226
>gi|356549146|ref|XP_003542958.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 436
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 98/175 (56%), Gaps = 8/175 (4%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P V+R + P+ K+GSIIGR GE++K+ +TK++IR+ + G+ +R+V +
Sbjct: 43 PGHCVFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLI------- 95
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIA-EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
+ ED + +SPA DA+ +V RV E+ + + +LLV S Q +IGK
Sbjct: 96 SGKEDLEAPLSPAMDAVIRVFKRVSGFSEIDAKNKASAVAFCSVRLLVASTQAINLIGKQ 155
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
G ++++I+ TGA +R+L + +P A + +V++ GEA V KAL + L
Sbjct: 156 GSLIKSIQENTGASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLR 210
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 100/180 (55%), Gaps = 10/180 (5%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ PV +G +IG+ G +I + +E+ A I+V + D ++ +S KE E LS
Sbjct: 48 FRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISGKEDLEAPLSP 107
Query: 346 TIEAVVRLQPRCSEKIERD----SGLISF-TTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
++AV+R+ R S E D + ++F + RLLV +++ LIGK GS+I ++ T
Sbjct: 108 AMDAVIRVFKRVSGFSEIDAKNKASAVAFCSVRLLVASTQAINLIGKQGSLIKSIQENTG 167
Query: 401 ANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
A++R+L + +P A+ D+ +V++ G+ AL V+ LR L D ++ +P+F
Sbjct: 168 ASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLRKFLVD-----NSVLPLF 222
>gi|383158165|gb|AFG61431.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 82/123 (66%), Gaps = 6/123 (4%)
Query: 103 EDGDKF--VSPAQDALFKVHDRVIAEE---LRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
+DGD+ + PAQDAL +VH VIA+E D D+D Q A+LLV + QIG +IGK
Sbjct: 8 DDGDENEPICPAQDALLRVHS-VIAQESSVKDKDNDADKKGQQNARLLVANSQIGSLIGK 66
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GG +Q +R+E+GAQI+I + + LP CA DELV ISG+A VKKAL +++ L+ +P
Sbjct: 67 GGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDAKAVKKALYSVSAFLYKHPP 126
Query: 218 RSQ 220
+ Q
Sbjct: 127 KEQ 129
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 42/72 (58%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
RLLV S+IG LIGKGG+ I +MR + A I+I K+ LP A DE+V ISGD
Sbjct: 50 NARLLVANSQIGSLIGKGGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDAKA 109
Query: 431 AKDALIQVMTRL 442
K AL V L
Sbjct: 110 VKKALYSVSAFL 121
>gi|357117002|ref|XP_003560265.1| PREDICTED: uncharacterized protein LOC100827626 [Brachypodium
distachyon]
Length = 656
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 178/355 (50%), Gaps = 40/355 (11%)
Query: 109 VSPAQDALFKVHD------RVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIV 162
+SPAQ+AL V D RV+A R E V+ +LV + + +G+G +
Sbjct: 114 LSPAQEALVSVVDVGGVLHRVVA---RAPE------FVSCLVLVEAAGLE-ALGRG--TL 161
Query: 163 QNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
+ I SET A++R+ L + PS E+++I+G+ + ++KA+ ++S L +
Sbjct: 162 EAIASETNAELRVTSLAEGATPSVH-SPKEVIEITGDRTTIRKAIVALSSYLQGD----- 215
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS 280
L A +++ S ++ + P ++ + P G + + P+D
Sbjct: 216 -LHACSLTTSVTTPSPMF-PWKSSEVP--EPNYGDLHSGVSTKCANINVPWIDCPQDVAG 271
Query: 281 S------KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
+ ++ S RL+C V GG+IGK G II E+GA+I V + + + +IT+S
Sbjct: 272 NVETENLQQISFRLLCHVNLAGGLIGKKGMIIKGFETETGASIDVGNPFSGCMERVITIS 331
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERD--SGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ E S A++ + R E++ER+ G + R+LVP S+ L+G GG+II
Sbjct: 332 ALES-PGKHSKVQSAILCIFDRM-EEVERNLMFGKPECSARVLVPKSQFSSLVGLGGAII 389
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
EM + T A I IL + ++P AS + ++QI+G+L +DAL V +LR + F
Sbjct: 390 KEMVKSTGARIEILDEMDVPACASNCERVLQITGNLVNVRDALFVVSEKLRNHAF 444
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 92/171 (53%), Gaps = 11/171 (6%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LC + G +IG+ G I+K +T + I +G G ERV+T+ +A E
Sbjct: 283 FRLLCHVNLAGGLIGKKGMIIKGFETETGASIDVGNPFSGCMERVITI-------SALES 335
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
K S Q A+ + DR+ EE+ + G + +A++LVP Q ++G GG I++
Sbjct: 336 PGKH-SKVQSAILCIFDRM--EEVERNL-MFGKPECSARVLVPKSQFSSLVGLGGAIIKE 391
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
+ TGA+I IL + +P+CA + ++QI+G V+ AL ++ +L ++
Sbjct: 392 MVKSTGARIEILDEMDVPACASNCERVLQITGNLVNVRDALFVVSEKLRNH 442
>gi|224121400|ref|XP_002330818.1| predicted protein [Populus trichocarpa]
gi|222872620|gb|EEF09751.1| predicted protein [Populus trichocarpa]
Length = 405
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 128/265 (48%), Gaps = 16/265 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D V+R + P+ K+GSIIGR GE+VK++ +T+++IRI E G +R+V + S +E
Sbjct: 8 PGDNVFRLIVPLSKVGSIIGRRGELVKKMCDETRARIRILEGPLGISDRIVLI-SGKEEP 66
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIA-EELRGDEDSDGGHQV-----TAKLLVPSDQIGC 153
A + SPA DA+ +V RV GD + +LLV S Q
Sbjct: 67 EAPQ------SPAMDAVMRVFKRVSGLSPGEGDNTGSAAAAAGSAFCSIRLLVASSQAIN 120
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
+IGK G I+++I+ TGA + ++ ++ LPS A + +V+I GEA V KAL + +L
Sbjct: 121 LIGKQGSIIKSIQENTGAAVHVMAEDELPSYATSDERIVEIHGEAMKVFKALEAVIGQLR 180
Query: 214 DNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY-GGYKGDTAGDWSRSLY 272
H + +++++ S P A P + L Y A D+S S
Sbjct: 181 KF--LVDHSVIPIFEKTYNATISQECPADARPDIAQPSLHSAYVPTIPSGIASDYSLSFK 238
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGG 297
P +F ++ P +I G
Sbjct: 239 RDPSIYEHETQFEHKISQPGLSIYG 263
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 15/185 (8%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ P++ +G +IG+ G ++ ++ E+ A I++ D ++ +S KE E S
Sbjct: 13 FRLIVPLSKVGSIIGRRGELVKKMCDETRARIRILEGPLGISDRIVLISGKEEPEAPQSP 72
Query: 346 TIEAVVRLQPRCS--EKIERDSGLISF--------TTRLLVPTSRIGCLIGKGGSIITEM 395
++AV+R+ R S E D+ + + RLLV +S+ LIGK GSII +
Sbjct: 73 AMDAVMRVFKRVSGLSPGEGDNTGSAAAAAGSAFCSIRLLVASSQAINLIGKQGSIIKSI 132
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVST 455
+ T A + ++ ++ LP A+ D+ +V+I G+ AL V+ +LR L D +
Sbjct: 133 QENTGAAVHVMAEDELPSYATSDERIVEIHGEAMKVFKALEAVIGQLRKFLVDH-----S 187
Query: 456 FVPVF 460
+P+F
Sbjct: 188 VIPIF 192
>gi|15236094|ref|NP_194330.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|4538929|emb|CAB39665.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|7269451|emb|CAB79455.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|15810499|gb|AAL07137.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|20466386|gb|AAM20510.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|21280915|gb|AAM45112.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|332659742|gb|AEE85142.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 495
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 146/317 (46%), Gaps = 42/317 (13%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D V+R + P+ K+G+IIGR G+ +K++ +T+++I++ + + +R+V +
Sbjct: 71 PGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLI------- 123
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV--TAKLLVPSDQIGCVIGK 157
+ E+ + ++SPA DA+ +V RV D+D V + +LLV S Q +IGK
Sbjct: 124 SGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGK 183
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD--- 214
G ++++I +GA +RIL +E P A + + +V + GEA + KAL I L
Sbjct: 184 QGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFLV 243
Query: 215 ----------------NPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL------ 252
+ +R + LA + S+ H+ S +L+ P + + PL
Sbjct: 244 DHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNLMEPDFSL-LARREPLFLERDS 302
Query: 253 -----MGPYGG--YKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAI 305
+ P G Y D S A + S + P + +IG GA
Sbjct: 303 RVDSRVQPSGVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFSYAEDIIGVEGAN 362
Query: 306 INQIRQESGAAIKVDSS 322
I IR+ SGA I + S
Sbjct: 363 IAYIRRRSGATITIKES 379
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 96/181 (53%), Gaps = 11/181 (6%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
R++ PV +G +IG+ G I ++ +E+ A IKV D ++ +S KE E +S
Sbjct: 76 FRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAYMSP 135
Query: 346 TIEAVVRLQPRCSEKIERD------SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
++AV+R+ R S + D +G + + RLLV +++ LIGK GS+I + +
Sbjct: 136 AMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGKQGSLIKSIVENS 195
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPV 459
A++RIL +E P A++D+ +V + G+ AL ++ LR L D T VP+
Sbjct: 196 GASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFLVDH-----TVVPL 250
Query: 460 F 460
F
Sbjct: 251 F 251
>gi|297803502|ref|XP_002869635.1| hypothetical protein ARALYDRAFT_492216 [Arabidopsis lyrata subsp.
lyrata]
gi|297315471|gb|EFH45894.1| hypothetical protein ARALYDRAFT_492216 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 100/175 (57%), Gaps = 9/175 (5%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D V+R + P+ K+G+IIGR G+ +K++ +T+++I++ + + +R+V +
Sbjct: 71 PGDCVFRMIVPVSKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLI------- 123
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDED--SDGGHQVTAKLLVPSDQIGCVIGK 157
+ E+ + ++SPA DA+ +V RV D+D + G + +LLV S Q +IGK
Sbjct: 124 SGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSAFCSVRLLVASTQAINLIGK 183
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G ++++I +GA +RIL +E P A + + +V + GEA + KAL I L
Sbjct: 184 QGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHL 238
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 96/181 (53%), Gaps = 11/181 (6%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
R++ PV+ +G +IG+ G I ++ +E+ A IKV D ++ +S KE E +S
Sbjct: 76 FRMIVPVSKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAYMSP 135
Query: 346 TIEAVVRLQPRCSEKIERD------SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
++AV+R+ R S + D +G + RLLV +++ LIGK GS+I + +
Sbjct: 136 AMDAVLRVFRRVSGLPDNDDDDVQNAGSAFCSVRLLVASTQAINLIGKQGSLIKSIVENS 195
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPV 459
A++RIL +E P A++D+ +V + G+ AL ++ LR L D T VP+
Sbjct: 196 GASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRKFLVDH-----TVVPL 250
Query: 460 F 460
F
Sbjct: 251 F 251
>gi|12597878|gb|AAG60186.1|AC084763_6 putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|31433543|gb|AAP55041.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|125532979|gb|EAY79544.1| hypothetical protein OsI_34673 [Oryza sativa Indica Group]
gi|125575714|gb|EAZ16998.1| hypothetical protein OsJ_32483 [Oryza sativa Japonica Group]
gi|215769329|dbj|BAH01558.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 458
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 100/178 (56%), Gaps = 12/178 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D+V+R + P+ K+GSIIGR GE++K+L +TK+K+R+ E G+ ER+V V + E
Sbjct: 53 PGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKAKVRVLEGPVGATERIVLV--SGKED 110
Query: 100 NAFEDGDKFVSPAQDALFKVHDRV--IAE-ELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
A E + PA DAL +V RV I + G + + A+LLVP Q +IG
Sbjct: 111 PALE-----LPPAMDALMRVFKRVSGITDGAAEGTQAATAPGVCAARLLVPGAQAINLIG 165
Query: 157 KGGQIVQNIRSETGAQIRILK--DEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
K G ++ I+ TGA IR++ + P + + +V+I GE V KAL +++ L
Sbjct: 166 KQGASIKAIQEGTGATIRVISIDERERPFYVIEDERIVEIQGETEKVLKALQAVSNHL 223
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RLV PV +G +IG+ G +I ++ +E+ A ++V + ++ VS KE L
Sbjct: 58 FRLVVPVLKVGSIIGRKGELIKRLVEETKAKVRVLEGPVGATERIVLVSGKEDPALELPP 117
Query: 346 TIEAVVRLQPRCS-------EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++A++R+ R S E + + RLLVP ++ LIGK G+ I ++
Sbjct: 118 AMDALMRVFKRVSGITDGAAEGTQAATAPGVCAARLLVPGAQAINLIGKQGASIKAIQEG 177
Query: 399 TKANIRILP--KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
T A IR++ + P ED+ +V+I G+ + AL V LR L D +
Sbjct: 178 TGATIRVISIDERERPFYVIEDERIVEIQGETEKVLKALQAVSNHLRKFLVDH-----SV 232
Query: 457 VPVF 460
+P+F
Sbjct: 233 LPLF 236
>gi|357507881|ref|XP_003624229.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355499244|gb|AES80447.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 275
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 102/178 (57%), Gaps = 14/178 (7%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
+D ++R + P ++IG +IG+ G ++++R T++ I+I + + EERV+ + S
Sbjct: 98 QDVIFRIVVPSKQIGKVIGKEGCRIQKIREMTRANIKIADAIARHEERVIIISS------ 151
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD--GGHQV--TAKLLVPSDQIGCVIG 156
+D D+ V+ A+ AL ++ + ++ E+ + S GH T +LL+ Q G +IG
Sbjct: 152 --KDNDEMVTDAEKALEQIANLILKEDNSSFDASKLTAGHVAANTIRLLIAGSQAGGLIG 209
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSC--ALRSDELVQISGEASVVKKALCQIASRL 212
GQ ++ +R+ +GA I +L LP C A SD +VQ+SG+ S V KAL +I +L
Sbjct: 210 MSGQNIEKLRNSSGAMITVLAPSQLPLCASAHESDRVVQLSGDVSTVMKALEEIGCQL 267
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 20/214 (9%)
Query: 251 PLMGPYGGYKGDTAGDWSR-----SLYSAPRDDLSS------KEFSLRLVCPVANIGGVI 299
PL PY + R L +A +LS+ ++ R+V P IG VI
Sbjct: 56 PLQLPYSTHDAGYPSSMKRRRDDEDLGTASSAELSAAKRAKGQDVIFRIVVPSKQIGKVI 115
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF------FEDTLSATIEAVVRL 353
GK G I +IR+ + A IK+ + ++ +I +SSK+ E L +++
Sbjct: 116 GKEGCRIQKIREMTRANIKIADAIARHEERVIIISSKDNDEMVTDAEKALEQIANLILKE 175
Query: 354 QPRCSEKIERDSGLISFTT-RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLP 412
+ + +G ++ T RLL+ S+ G LIG G I ++R + A I +L LP
Sbjct: 176 DNSSFDASKLTAGHVAANTIRLLIAGSQAGGLIGMSGQNIEKLRNSSGAMITVLAPSQLP 235
Query: 413 KIAS--EDDEMVQISGDLDLAKDALIQVMTRLRA 444
AS E D +VQ+SGD+ AL ++ +LR+
Sbjct: 236 LCASAHESDRVVQLSGDVSTVMKALEEIGCQLRS 269
>gi|356562072|ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 436
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 105/194 (54%), Gaps = 16/194 (8%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
D ++R+ G P V+R + P+ K+GSIIGR GE++K+ +TK++IR+
Sbjct: 31 DPAAAEKRWPG--------WPGHCVFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVL 82
Query: 80 ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIA-EELRGDEDSDGGH 138
+ G+ +R+V + + E+ + +SPA +A+ +V RV E+ + +
Sbjct: 83 DGAVGTSDRIVLI-------SGKEEPEAPLSPAMNAVIRVFKRVSGFSEIDAENKASAVA 135
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
+ +LLV S Q +IGK G ++++I+ TGA +R+L + +P A + +V++ GEA
Sbjct: 136 FCSVRLLVASTQAINLIGKQGSLIKSIQENTGASVRVLSGDEVPFYAAADERIVELQGEA 195
Query: 199 SVVKKALCQIASRL 212
V KAL + L
Sbjct: 196 MKVLKALEAVVGHL 209
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 99/180 (55%), Gaps = 10/180 (5%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ PV +G +IG+ G +I + +E+ A I+V + D ++ +S KE E LS
Sbjct: 48 FRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISGKEEPEAPLSP 107
Query: 346 TIEAVVRLQPRCSEKIERD----SGLISF-TTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
+ AV+R+ R S E D + ++F + RLLV +++ LIGK GS+I ++ T
Sbjct: 108 AMNAVIRVFKRVSGFSEIDAENKASAVAFCSVRLLVASTQAINLIGKQGSLIKSIQENTG 167
Query: 401 ANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
A++R+L + +P A+ D+ +V++ G+ AL V+ LR L D ++ +P+F
Sbjct: 168 ASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLRKFLVD-----NSVLPLF 222
>gi|291237680|ref|XP_002738761.1| PREDICTED: poly(rC) binding protein 2-like [Saccoglossus
kowalevskii]
Length = 409
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 159/353 (45%), Gaps = 61/353 (17%)
Query: 39 GPEDTV-YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
GP T+ R + +++GSIIG+GGE +K+ R + ++I I ++ ER+VTV +++
Sbjct: 14 GPAVTLTIRLIMQGKEVGSIIGKGGETIKKFREQSGARINISDS--SCAERIVTVTGSTE 71
Query: 98 E-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
NAFE + K + ++ + S VT +L+VP+ Q G +IG
Sbjct: 72 AINNAFE-----------MITKKFEEDVSNNMA--NSSTPKPPVTLRLVVPASQCGSLIG 118
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KGG ++ IR TGA +++ D S ++ V ISG + K + QI + ++P
Sbjct: 119 KGGSKIKEIRENTGASVQVAGDMLHQS----TERAVTISGTPEAITKCVYQICCVMLESP 174
Query: 217 S-------RSQHLLASAISNSHSSSGSLVGP------------------TAATPIVGIAP 251
R + A+A +++ G+ P TP A
Sbjct: 175 PKGATIPYRPKPTNATATHPAYAVHGNYAVPYPDFMKLHHLTMQHTPFLPGQTPFTPTAL 234
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
MG YG +AG + + + + ++ P IG VIG+GGA IN+IRQ
Sbjct: 235 NMG-YGVANAASAGTQVAT----------TGQQTYEIMIPNDLIGCVIGRGGAKINEIRQ 283
Query: 312 ESGAAIKVDSSSTEGDDCLITVSSK----EFFEDTLSATIEAVVRLQPRCSEK 360
SGA IK+ +S +D +T+S +++++E L P + K
Sbjct: 284 ISGATIKIANSQEGSNDRSVTISGTVEAINLAHFLINSSLELAKNLAPELAAK 336
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 25/140 (17%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-DSS----------STE 325
+D + ++RL+ +G +IGKGG I + R++SGA I + DSS STE
Sbjct: 12 NDGPAVTLTIRLIMQGKEVGSIIGKGGETIKKFREQSGARINISDSSCAERIVTVTGSTE 71
Query: 326 GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLI 385
+ + +K+F ED + + P T RL+VP S+ G LI
Sbjct: 72 AINNAFEMITKKFEEDVSNNMANSSTPKPP--------------VTLRLVVPASQCGSLI 117
Query: 386 GKGGSIITEMRRLTKANIRI 405
GKGGS I E+R T A++++
Sbjct: 118 GKGGSKIKEIRENTGASVQV 137
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T +++P IGC+IG+GG+ I E+R+++ A I+I + +D V ISG ++
Sbjct: 257 TYEIMIPNDLIGCVIGRGGAKINEIRQISGATIKIANSQE-----GSNDRSVTISGTVEA 311
Query: 431 AKDA--LIQVMTRLRANLFDREGAVSTFVP 458
A LI L NL A + +P
Sbjct: 312 INLAHFLINSSLELAKNLAPELAAKANLIP 341
>gi|223947189|gb|ACN27678.1| unknown [Zea mays]
gi|223950255|gb|ACN29211.1| unknown [Zea mays]
gi|414868821|tpg|DAA47378.1| TPA: KH domain containing protein [Zea mays]
Length = 508
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 102/184 (55%), Gaps = 13/184 (7%)
Query: 32 DRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVT 91
D ++ P ++V+R L P K+G++IGR G+ +K++ +++++I++ E P ER V
Sbjct: 96 DDKKWPGWPGESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVM 155
Query: 92 VYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVT---AKLLVPS 148
+ SA DE D + PA D L +VH R I + L + D V +LLVP+
Sbjct: 156 I-SAKDEP------DTELPPAVDGLLRVHRR-ITDGLETETDQPQRATVNTGPTRLLVPA 207
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI 208
Q G +IGK G +++I+ + +RI+ E++P AL D +V+I GE KA+ I
Sbjct: 208 SQAGSLIGKQGATIKSIQDASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAVELI 265
Query: 209 ASRL 212
AS L
Sbjct: 266 ASHL 269
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 99/184 (53%), Gaps = 13/184 (7%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G VIG+ G I ++ +ES A IKV + + +S+K+ +
Sbjct: 106 ESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDTE 165
Query: 343 LSATIEAVVRLQPRCSEKIERDSG------LISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
L ++ ++R+ R ++ +E ++ + + TRLLVP S+ G LIGK G+ I ++
Sbjct: 166 LPPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGKQGATIKSIQ 225
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
+K +RI+ EN+P +A DD +V+I G+ + A+ + + LR L DR +
Sbjct: 226 DASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHLRKFLVDR-----SV 278
Query: 457 VPVF 460
+P+F
Sbjct: 279 LPLF 282
>gi|226494805|ref|NP_001148654.1| KH domain containing protein [Zea mays]
gi|195621126|gb|ACG32393.1| KH domain containing protein [Zea mays]
Length = 529
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 102/184 (55%), Gaps = 13/184 (7%)
Query: 32 DRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVT 91
D ++ P ++V+R L P K+G++IGR G+ +K++ +++++I++ E P ER V
Sbjct: 96 DDKKWPGWPGESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVM 155
Query: 92 VYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVT---AKLLVPS 148
+ SA DE D + PA D L +VH R I + L + D V +LLVP+
Sbjct: 156 I-SAKDEP------DTELPPAVDGLLRVHRR-ITDGLETETDQPQRATVNTGPTRLLVPA 207
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI 208
Q G +IGK G +++I+ + +RI+ E++P AL D +V+I GE KA+ I
Sbjct: 208 SQAGSLIGKQGATIKSIQDASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAVELI 265
Query: 209 ASRL 212
AS L
Sbjct: 266 ASHL 269
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 99/184 (53%), Gaps = 13/184 (7%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G VIG+ G I ++ +ES A IKV + + +S+K+ +
Sbjct: 106 ESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDTE 165
Query: 343 LSATIEAVVRLQPRCSEKIERDSG------LISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
L ++ ++R+ R ++ +E ++ + + TRLLVP S+ G LIGK G+ I ++
Sbjct: 166 LPPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGKQGATIKSIQ 225
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
+K +RI+ EN+P +A DD +V+I G+ + A+ + + LR L DR +
Sbjct: 226 DASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHLRKFLVDR-----SV 278
Query: 457 VPVF 460
+P+F
Sbjct: 279 LPLF 282
>gi|414868822|tpg|DAA47379.1| TPA: hypothetical protein ZEAMMB73_380288 [Zea mays]
Length = 499
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 102/184 (55%), Gaps = 13/184 (7%)
Query: 32 DRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVT 91
D ++ P ++V+R L P K+G++IGR G+ +K++ +++++I++ E P ER V
Sbjct: 96 DDKKWPGWPGESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVM 155
Query: 92 VYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVT---AKLLVPS 148
+ SA DE D + PA D L +VH R I + L + D V +LLVP+
Sbjct: 156 I-SAKDEP------DTELPPAVDGLLRVHRR-ITDGLETETDQPQRATVNTGPTRLLVPA 207
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI 208
Q G +IGK G +++I+ + +RI+ E++P AL D +V+I GE KA+ I
Sbjct: 208 SQAGSLIGKQGATIKSIQDASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAVELI 265
Query: 209 ASRL 212
AS L
Sbjct: 266 ASHL 269
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 99/184 (53%), Gaps = 13/184 (7%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G VIG+ G I ++ +ES A IKV + + +S+K+ +
Sbjct: 106 ESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDTE 165
Query: 343 LSATIEAVVRLQPRCSEKIERDSG------LISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
L ++ ++R+ R ++ +E ++ + + TRLLVP S+ G LIGK G+ I ++
Sbjct: 166 LPPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGKQGATIKSIQ 225
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
+K +RI+ EN+P +A DD +V+I G+ + A+ + + LR L DR +
Sbjct: 226 DASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHLRKFLVDR-----SV 278
Query: 457 VPVF 460
+P+F
Sbjct: 279 LPLF 282
>gi|224115590|ref|XP_002332094.1| predicted protein [Populus trichocarpa]
gi|222874914|gb|EEF12045.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 102/187 (54%), Gaps = 15/187 (8%)
Query: 34 DQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVY 93
D++ P D V+R + P+ K+GSIIGR GE+VK++ +T+++IRI E G +R+V +
Sbjct: 44 DKWPGWPGDNVFRLIVPVSKVGSIIGRKGELVKKMCDETRARIRILEGPLGITDRIVLI- 102
Query: 94 SASDETNAFEDGDKFVSPAQDALFKVHDRVIA-EELRGDEDSDGGHQV-------TAKLL 145
+ E+ + +SPA DA+ +V RV GD + +LL
Sbjct: 103 ------SGKEEPEAPLSPAMDAVLRVFKRVSGLSPGEGDNTGSAAAAAAAGSAFCSIRLL 156
Query: 146 VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKAL 205
V S Q +IGK G I+++I+ TG +R++ ++ +P+ A + +V+I GEA V KAL
Sbjct: 157 VASSQAINLIGKQGSIIKSIQENTGVVVRVMAEDDIPTYATSDERIVEIHGEAMKVFKAL 216
Query: 206 CQIASRL 212
+ L
Sbjct: 217 EAVIGHL 223
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 97/187 (51%), Gaps = 17/187 (9%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ PV+ +G +IG+ G ++ ++ E+ A I++ D ++ +S KE E LS
Sbjct: 55 FRLIVPVSKVGSIIGRKGELVKKMCDETRARIRILEGPLGITDRIVLISGKEEPEAPLSP 114
Query: 346 TIEAVVRLQPRCS--EKIERDSGLISF----------TTRLLVPTSRIGCLIGKGGSIIT 393
++AV+R+ R S E D+ + + RLLV +S+ LIGK GSII
Sbjct: 115 AMDAVLRVFKRVSGLSPGEGDNTGSAAAAAAAGSAFCSIRLLVASSQAINLIGKQGSIIK 174
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
++ T +R++ ++++P A+ D+ +V+I G+ AL V+ LR L D
Sbjct: 175 SIQENTGVVVRVMAEDDIPTYATSDERIVEIHGEAMKVFKALEAVIGHLRKFLVDH---- 230
Query: 454 STFVPVF 460
+ +P+F
Sbjct: 231 -SVIPIF 236
>gi|242040159|ref|XP_002467474.1| hypothetical protein SORBIDRAFT_01g028800 [Sorghum bicolor]
gi|241921328|gb|EER94472.1| hypothetical protein SORBIDRAFT_01g028800 [Sorghum bicolor]
Length = 452
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 12/178 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D+V+R + P+ K+GSIIGR GE++K+L +TK+++RI E G+ ER+V V
Sbjct: 47 PGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLV------- 99
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIA---EELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
+ ED + PA DAL +V RVI G + + A+LLVP Q +IG
Sbjct: 100 SGKEDPGLELPPAMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIG 159
Query: 157 KGGQIVQNIRSETGAQIRILK-DEHLPSCALRSDE-LVQISGEASVVKKALCQIASRL 212
K G ++ I+ TGA IR++ DE + DE +++I G+ V KAL +++ L
Sbjct: 160 KQGATIKAIQESTGATIRVISVDERERPFYVTDDERIIEIQGDTEKVLKALQAVSNHL 217
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 14/184 (7%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RLV PV +G +IG+ G +I ++ +E+ A +++ + ++ VS KE L
Sbjct: 52 FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPGLELPP 111
Query: 346 TIEAVVRLQPR-------CSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++A++R+ R +E + + RLLVP ++ LIGK G+ I ++
Sbjct: 112 AMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGATIKAIQES 171
Query: 399 TKANIRILP--KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
T A IR++ + P ++D+ +++I GD + AL V LR L D +
Sbjct: 172 TGATIRVISVDERERPFYVTDDERIIEIQGDTEKVLKALQAVSNHLRKFLVDH-----SV 226
Query: 457 VPVF 460
+P+F
Sbjct: 227 LPLF 230
>gi|326511144|dbj|BAJ87586.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 106/195 (54%), Gaps = 20/195 (10%)
Query: 23 PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
P +R+ G P D V+R + P+ K+GSIIGR GE++K+L +TK+++R+ E
Sbjct: 39 PEAKRWPG--------WPGDNVFRMVVPVLKVGSIIGRKGELIKRLVEETKARVRVLEGP 90
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV--IAE-ELRGDEDSDGGHQ 139
G+ ER+V V +A ED + PA DAL +V RV I++ G + S
Sbjct: 91 VGATERIVLV-------SAKEDPGLELPPAMDALIRVFKRVNGISDGAAEGTQTSAAPGV 143
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILK-DEHLPSCALRSDE-LVQISGE 197
A+L+VP Q +IGK G ++ I+ TGA IR++ DE + DE +V+I GE
Sbjct: 144 CAARLVVPGAQAINLIGKQGASIKAIQEGTGATIRVISVDERDRPFYVTDDERIVEIQGE 203
Query: 198 ASVVKKALCQIASRL 212
V KAL +++ L
Sbjct: 204 TEKVLKALQAVSNHL 218
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 92/184 (50%), Gaps = 14/184 (7%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
R+V PV +G +IG+ G +I ++ +E+ A ++V + ++ VS+KE L
Sbjct: 53 FRMVVPVLKVGSIIGRKGELIKRLVEETKARVRVLEGPVGATERIVLVSAKEDPGLELPP 112
Query: 346 TIEAVVRLQPR-------CSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++A++R+ R +E + + RL+VP ++ LIGK G+ I ++
Sbjct: 113 AMDALIRVFKRVNGISDGAAEGTQTSAAPGVCAARLVVPGAQAINLIGKQGASIKAIQEG 172
Query: 399 TKANIRILP--KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
T A IR++ + + P ++D+ +V+I G+ + AL V LR L D +
Sbjct: 173 TGATIRVISVDERDRPFYVTDDERIVEIQGETEKVLKALQAVSNHLRKFLVDH-----SV 227
Query: 457 VPVF 460
+P+F
Sbjct: 228 LPLF 231
>gi|255554418|ref|XP_002518248.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223542595|gb|EEF44134.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 451
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 100/176 (56%), Gaps = 9/176 (5%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D V+R + P+ K+GSIIGR G+++K++ +T+++IR+ + G+ +RVV +
Sbjct: 58 PGDCVFRLIVPVLKVGSIIGRKGDLIKKMCDETRARIRVLDAPIGTPDRVVLI------- 110
Query: 100 NAFEDGDKFVSPAQDALFKVHDRV--IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
+ ED + +SPA DA+ +V RV + E + + G + +LLV S Q +IGK
Sbjct: 111 SGKEDVEAPLSPAMDAVIRVFKRVSGLPEGNAQELGAAGIAFSSIRLLVASTQAINLIGK 170
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
G I+++I+ TGA +R+L + +P + +V + GEA V +AL I L
Sbjct: 171 QGSIIKSIQESTGASVRVLSENEVPFYVATDERIVDLQGEAMKVLEALEAIVGHLR 226
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 97/181 (53%), Gaps = 11/181 (6%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ PV +G +IG+ G +I ++ E+ A I+V + D ++ +S KE E LS
Sbjct: 63 FRLIVPVLKVGSIIGRKGDLIKKMCDETRARIRVLDAPIGTPDRVVLISGKEDVEAPLSP 122
Query: 346 TIEAVVRLQPRCSEKIERDS------GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
++AV+R+ R S E ++ G+ + RLLV +++ LIGK GSII ++ T
Sbjct: 123 AMDAVIRVFKRVSGLPEGNAQELGAAGIAFSSIRLLVASTQAINLIGKQGSIIKSIQEST 182
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPV 459
A++R+L + +P + D+ +V + G+ +AL ++ LR L D + +P+
Sbjct: 183 GASVRVLSENEVPFYVATDERIVDLQGEAMKVLEALEAIVGHLRKFLVDH-----SVLPL 237
Query: 460 F 460
F
Sbjct: 238 F 238
>gi|361066699|gb|AEW07661.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 79/123 (64%), Gaps = 6/123 (4%)
Query: 103 EDGDKF--VSPAQDALFKVHDRVIAEELRGDEDSDGGH---QVTAKLLVPSDQIGCVIGK 157
+DGD+ + PAQDAL +VH VIA+E + Q A+LLV + QIG +IGK
Sbjct: 8 DDGDENEPICPAQDALLRVHS-VIAQESSAKDKDSDADKKGQQNARLLVANSQIGSLIGK 66
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GG +Q +R+E+GAQI+I + + LP CA DELV ISG+A+ VKKAL +++ L+ +
Sbjct: 67 GGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDATAVKKALYAVSAFLYKHLP 126
Query: 218 RSQ 220
+ Q
Sbjct: 127 KEQ 129
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 48/88 (54%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
RLLV S+IG LIGKGG+ I +MR + A I+I K+ LP A DE+V ISGD
Sbjct: 50 NARLLVANSQIGSLIGKGGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDATA 109
Query: 431 AKDALIQVMTRLRANLFDREGAVSTFVP 458
K AL V L +L + S +P
Sbjct: 110 VKKALYAVSAFLYKHLPKEQIPWSLILP 137
>gi|384490263|gb|EIE81485.1| hypothetical protein RO3G_06190 [Rhizopus delemar RA 99-880]
Length = 426
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 152/338 (44%), Gaps = 69/338 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L ++ G IIG+GG+ V ++R + +++ I + VPG+ ER++TV
Sbjct: 82 RSLVGMKDAGLIIGKGGKNVSEIRDSSMARVNISDIVPGAAERILTVVGP---------- 131
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ--VTAKLLVPSDQIGCVIGKGGQIVQ 163
VS A V +++I E ED+ G Q VT K+L+ ++++G +IGK G +++
Sbjct: 132 ---VSAVAKAYALVAEKIIEENTLA-EDNKGPIQQDVTIKILILANRMGSIIGKSGSVIR 187
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR----- 218
+I+ +GA++ ++E LP L ++ +V I G +++A+ +I L D P+
Sbjct: 188 SIQETSGAKVS-AQEEPLP---LSTERVVTIHGTPDAIEQAVKKIGDILVDQPNHHGNYM 243
Query: 219 --------SQHLLASAISNSHSS--------------------------SGSLVGPTAAT 244
+ H +S N H + SG L P
Sbjct: 244 LYKPIAGAAPHTSSSNHGNGHRNYRRSNDNNNAASHAMPTAAAAAMMGYSGML--PMGNM 301
Query: 245 PIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD--------DLSSKEFSLRLVCPVANIG 296
+ G Y G G GD+ + + ++ S ++ P +G
Sbjct: 302 SMNGFYYPPTNYPGGSGGRQGDYPLPMMPGLSNLSMMGGLSNMMPATQSQQIYIPNEMVG 361
Query: 297 GVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
+IGKGG IN+IRQ SG+ IK+ ST+ + LIT++
Sbjct: 362 CIIGKGGMKINEIRQTSGSHIKIADPSTDSHERLITIT 399
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 88/181 (48%), Gaps = 23/181 (12%)
Query: 267 WSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
++R++ A + + + SLR + + + G +IGKGG +++IR S A + +
Sbjct: 62 YTRTVTVASEEGMIAGNISLRSLVGMKDAGLIIGKGGKNVSEIRDSSMARVNISDIVPGA 121
Query: 327 DDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI-------ERDSGLIS--FTTRLLVP 377
+ ++TV + AV + +EKI E + G I T ++L+
Sbjct: 122 AERILTV----------VGPVSAVAKAYALVAEKIIEENTLAEDNKGPIQQDVTIKILIL 171
Query: 378 TSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQ 437
+R+G +IGK GS+I ++ + A + +E LP +++E +V I G D + A+ +
Sbjct: 172 ANRMGSIIGKSGSVIRSIQETSGAKVSAQ-EEPLP-LSTE--RVVTIHGTPDAIEQAVKK 227
Query: 438 V 438
+
Sbjct: 228 I 228
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
+ ++ +P +GC+IGKGG I E+R+ + ++I+I P S + ++ I+G +
Sbjct: 350 SQQIYIPNEMVGCIIGKGGMKINEIRQTSGSHIKIAD----PSTDSH-ERLITITGTPES 404
Query: 431 AKDALIQVMTRLRA 444
+ AL + +RL A
Sbjct: 405 NQMALYLLYSRLEA 418
>gi|307136423|gb|ADN34230.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 331
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 98/175 (56%), Gaps = 10/175 (5%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
D ++R + P ++IG +IG+ G ++++R +TK+ I+I + V EERV+ + S+ D N+
Sbjct: 68 DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIII-SSKDNENS 126
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV--TAKLLVPSDQIGCVIGKGG 159
D +K + + K D EEL+ GH T +LL+ Q G +IG G
Sbjct: 127 VTDAEKALQQIAALILK-EDGSSIEELK----VGTGHVAANTIRLLIAGSQAGSLIGASG 181
Query: 160 QIVQNIRSETGAQIRILKDEHLPSC--ALRSDELVQISGEASVVKKALCQIASRL 212
Q ++ +R+ +GA I IL LP C A SD +VQISG+ V KAL +I ++L
Sbjct: 182 QNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQL 236
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 94/180 (52%), Gaps = 9/180 (5%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
SAP+ + + R+V P IG VIGK G I ++R+E+ A IK+ + ++ +I
Sbjct: 58 SAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVII 117
Query: 333 VSSKEF------FEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT-RLLVPTSRIGCLI 385
+SSK+ E L +++ E+++ +G ++ T RLL+ S+ G LI
Sbjct: 118 ISSKDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLI 177
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIAS--EDDEMVQISGDLDLAKDALIQVMTRLR 443
G G I ++R + A+I IL LP AS E D +VQISGD+ AL ++ +LR
Sbjct: 178 GASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLR 237
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 20/120 (16%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS- 195
H V +++VPS QIG VIGK G +Q +R ET A I+I + A + ++ IS
Sbjct: 66 AHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIAD-----AVARYEERVIIISS 120
Query: 196 --GEASVV--KKALCQIASRL--HDNPSRSQ------HLLASAISN--SHSSSGSLVGPT 241
E SV +KAL QIA+ + D S + H+ A+ I + S +GSL+G +
Sbjct: 121 KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180
>gi|226528431|ref|NP_001149906.1| nucleic acid binding protein [Zea mays]
gi|195635381|gb|ACG37159.1| nucleic acid binding protein [Zea mays]
Length = 448
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 12/178 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D+V+R + P+ K+GSIIGR GE++K+L +TK+++RI E G+ ER+V V
Sbjct: 43 PGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLV------- 95
Query: 100 NAFEDGDKFVSPAQDALFKVHDRV--IAEELRGDEDSDGGHQV-TAKLLVPSDQIGCVIG 156
+ ED D + PA DAL +V V I + + V A+LLVP Q +IG
Sbjct: 96 SGKEDPDLELPPAMDALMRVFKXVTGITDGAAEXTQAAATPDVCAARLLVPGAQAINLIG 155
Query: 157 KGGQIVQNIRSETGAQIRILK-DEHLPSCALRSDE-LVQISGEASVVKKALCQIASRL 212
K G ++ I+ T A IR++ DEH + DE +V+I G+ V KAL +++ L
Sbjct: 156 KQGATIKAIQESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHL 213
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RLV PV +G +IG+ G +I ++ +E+ A +++ + ++ VS KE + L
Sbjct: 48 FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPDLELPP 107
Query: 346 TIEAVVRLQPRCSEKIERDSGLISF-------TTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++A++R+ + + + RLLVP ++ LIGK G+ I ++
Sbjct: 108 AMDALMRVFKXVTGITDGAAEXTQAAATPDVCAARLLVPGAQAINLIGKQGATIKAIQES 167
Query: 399 TKANIRILP--KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
T A IR++ + P ++D+ +V+I GD + AL V LR L D +
Sbjct: 168 TSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLVDH-----SV 222
Query: 457 VPVF 460
+P+F
Sbjct: 223 LPLF 226
>gi|257831439|gb|ACV71020.1| UPA21 [Capsicum annuum]
Length = 433
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 97/175 (55%), Gaps = 10/175 (5%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D VYR + P+ K+GSIIGR GE+VK++ T ++IR+ E G+ +R+V +
Sbjct: 51 PGDNVYRLVVPLVKVGSIIGRKGELVKKMCEQTGARIRVLEGPLGNADRIVLI------- 103
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGD--EDSDGGHQVTAKLLVPSDQIGCVIGK 157
+ ED D VSPA DA+F+V RV E GD + G + KLL+ S Q +IG+
Sbjct: 104 SGREDPDAQVSPAMDAVFRVFKRVAGLE-GGDPGAAAAGFAFCSFKLLMASSQAVHLIGR 162
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G ++ I+ +GA +R+L ++ + A + +V+I GE V A + +L
Sbjct: 163 HGSTIKEIQERSGASLRVLSEDDVVPYATADERIVEIRGEGLKVLDAFEAVVRQL 217
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 98/179 (54%), Gaps = 10/179 (5%)
Query: 287 RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSAT 346
RLV P+ +G +IG+ G ++ ++ +++GA I+V D ++ +S +E + +S
Sbjct: 57 RLVVPLVKVGSIIGRKGELVKKMCEQTGARIRVLEGPLGNADRIVLISGREDPDAQVSPA 116
Query: 347 IEAVVRLQPRCS-----EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
++AV R+ R + + +G + +LL+ +S+ LIG+ GS I E++ + A
Sbjct: 117 MDAVFRVFKRVAGLEGGDPGAAAAGFAFCSFKLLMASSQAVHLIGRHGSTIKEIQERSGA 176
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
++R+L ++++ A+ D+ +V+I G+ DA V+ +LR L D + +P+F
Sbjct: 177 SLRVLSEDDVVPYATADERIVEIRGEGLKVLDAFEAVVRQLRKFLVDH-----SMIPIF 230
>gi|449524744|ref|XP_004169381.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 224
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 94/161 (58%), Gaps = 11/161 (6%)
Query: 16 TDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSK 75
+D A H P+ +TG ++ P D V+R + P+ K+GSIIGR G+++K++ +T+++
Sbjct: 56 SDSAAHEPSN--HTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRAR 113
Query: 76 IRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
IR+ + G+ +RVV + + E+ + +SPA DA+ +V RV L +ED
Sbjct: 114 IRVLDGAVGTPDRVVLI-------SGKEELESPLSPAMDAVIRVFKRV--SGLSENEDEA 164
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
+ +LLV S Q +IGK G ++++I+ TGA +R+L
Sbjct: 165 KASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVL 205
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 72/123 (58%), Gaps = 2/123 (1%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ PV +G +IG+ G +I ++ +E+ A I+V + D ++ +S KE E LS
Sbjct: 83 FRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESPLSP 142
Query: 346 TIEAVVRLQPRCSEKIER-DSGLISFTT-RLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
++AV+R+ R S E D SF + RLLV +++ LIGK GS+I ++ T A++
Sbjct: 143 AMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASV 202
Query: 404 RIL 406
R+L
Sbjct: 203 RVL 205
>gi|348519761|ref|XP_003447398.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 3 [Oreochromis niloticus]
Length = 588
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 187/409 (45%), Gaps = 64/409 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+SK+ I + G+ E+ +T++S + +
Sbjct: 198 DFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPITIHSTPEGCS 257
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A A + + + A E + ED + K+L + +G +IGK G+
Sbjct: 258 A----------ACRMILDIMQKE-ANETKTTED------IPLKILAHNSLVGRLIGKEGR 300
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPS 217
++ I +TG +I I + L + + + G KA +I +L ++N
Sbjct: 301 NLKKIEEDTGTKITISSLQDL--TIYNPERTITVKGSIDACCKAEVEITKKLREAYENDI 358
Query: 218 RSQHLLASAISNSH------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
+ + A+ I + SSG V P AA P + P + P G ++ L
Sbjct: 359 AAINQQANLIPGLNLNALGIFSSGLPVLPPAAGPRSAV-PAVAPAG---------YNPFL 408
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
AP ++ + L P +G +IGK G I Q+ +GA+IK+ + E D
Sbjct: 409 QQAPEQEV------VYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKI--APAESPD--- 457
Query: 332 TVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIG 386
V+ + ++ T EA + Q R K++ ++ + T + VP+S G +IG
Sbjct: 458 -VTERMVI---ITGTPEAQFKAQGRIFGKLKEENFFSAKEEVKLETHIKVPSSAAGRVIG 513
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEM-VQISGDLDLAKDA 434
KGG + E++ LT A + I+P++ P E+DE+ V+ISG ++ A
Sbjct: 514 KGGKTVNELQNLTSAEV-IVPRDQTP---DENDEVFVKISGHFFASQTA 558
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 23/197 (11%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSASD 97
PE V P + +G++IG+ G+ +KQL + I+I P ER+V + + +
Sbjct: 411 APEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVII-TGTP 469
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
E G F ++ F + V ++ + VPS G VIGK
Sbjct: 470 EAQFKAQGRIFGKLKEENFFSAKEEV---------------KLETHIKVPSSAAGRVIGK 514
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKALCQIASRLHDNP 216
GG+ V +++ T A++ + +D+ +DE V+ISG + A +I +
Sbjct: 515 GGKTVNELQNLTSAEVIVPRDQ----TPDENDEVFVKISGHFFASQTAQRKIREIIQQVK 570
Query: 217 SRSQ-HLLASAISNSHS 232
+ Q H +A+S HS
Sbjct: 571 QQEQKHQQGAAVSPHHS 587
>gi|432934409|ref|XP_004081928.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Oryzias latipes]
Length = 600
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 189/418 (45%), Gaps = 57/418 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDET 99
+D R L P + +G+IIG+ G +K + T+SK+ I + G+ E+ +T++S +
Sbjct: 186 QDFPLRILVPTQFVGAIIGKEGLTIKNVTKQTQSKVDIHRKENAGAAEKPITIHSTPEGC 245
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
++ A + + + A E + +E+ + K+L + +G +IGK G
Sbjct: 246 SS----------ACRMILDIMQKE-ANETKTNEE------IPLKILAHNSLVGRLIGKEG 288
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L C + + + G KA +I +L ++N
Sbjct: 289 RNLKKIEEETGTKITISSLQDLTIC--NPERTITVKGSLEACCKAEVEIMKKLKEAYEND 346
Query: 217 SRSQHLLASAISNSH------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRS 270
+ + A+ I + SSG V P AA G P M P G +
Sbjct: 347 IAAINQQANLIPGLNLNALGIFSSGLPVLPPAAGS-RGAVPPMPPAGYNPFLSHSSHLSG 405
Query: 271 LYSAPRDDLSSKEFS--------LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
LY P + S + L P +G +IGK G I Q+ +GA+IK+ +
Sbjct: 406 LYGVPPTSAIPHQHSQQAPEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKI--A 463
Query: 323 STEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVP 377
E D V+ + ++ T EA + Q R K++ ++ + T + VP
Sbjct: 464 PAESPD----VTERMVI---ITGTPEAQFKAQGRIFGKLKEENFFSAKEEVKLETHIKVP 516
Query: 378 TSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEM-VQISGDLDLAKDA 434
+S G +IGKGG + E++ LT A + I+P++ +P E+DE+ V+ISG ++ A
Sbjct: 517 SSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQIP---DENDEVFVKISGHFFASQTA 570
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 22/160 (13%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSASD 97
PE V P + +G++IG+ G+ +KQL + I+I P ER+V + + +
Sbjct: 423 APEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVII-TGTP 481
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
E G F ++ F + V ++ + VPS G VIGK
Sbjct: 482 EAQFKAQGRIFGKLKEENFFSAKEEV---------------KLETHIKVPSSAAGRVIGK 526
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISG 196
GG+ V +++ T A++ + +D+ +P +DE V+ISG
Sbjct: 527 GGKTVNELQNLTSAEVIVPRDQ-IPD---ENDEVFVKISG 562
>gi|357479529|ref|XP_003610050.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355511105|gb|AES92247.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 431
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 103/195 (52%), Gaps = 17/195 (8%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
D +++R+ G P V+R + P+ K+G IIGR GE++K+ +T ++IR+
Sbjct: 29 DESESEKRWPG--------WPGHCVFRLIVPVVKVGIIIGRKGELIKKTCEETHARIRVL 80
Query: 80 ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV--IAEELRGDEDSDGG 137
+ G+ +R+V + + ED + +SPA DA+ ++ RV ++E + + G
Sbjct: 81 DAPVGTPDRIVLI-------SGKEDLEAPLSPAMDAILRIFKRVSGLSETDNNNTAAAGV 133
Query: 138 HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGE 197
+ +LLV S Q +IGK G ++ I+ TGA IR+L + LPS A + ++ + GE
Sbjct: 134 ALCSIRLLVASTQAINLIGKQGSSIKAIQENTGAVIRVLSGDELPSYAGADERIIDLQGE 193
Query: 198 ASVVKKALCQIASRL 212
V KAL + L
Sbjct: 194 TLKVLKALEAVVGHL 208
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 95/181 (52%), Gaps = 11/181 (6%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ PV +G +IG+ G +I + +E+ A I+V + D ++ +S KE E LS
Sbjct: 46 FRLIVPVVKVGIIIGRKGELIKKTCEETHARIRVLDAPVGTPDRIVLISGKEDLEAPLSP 105
Query: 346 TIEAVVRLQPRCSEKIERD------SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
++A++R+ R S E D +G+ + RLLV +++ LIGK GS I ++ T
Sbjct: 106 AMDAILRIFKRVSGLSETDNNNTAAAGVALCSIRLLVASTQAINLIGKQGSSIKAIQENT 165
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPV 459
A IR+L + LP A D+ ++ + G+ AL V+ LR L D S+ +P+
Sbjct: 166 GAVIRVLSGDELPSYAGADERIIDLQGETLKVLKALEAVVGHLRKFLVD-----SSVIPL 220
Query: 460 F 460
F
Sbjct: 221 F 221
>gi|194222666|ref|XP_001498933.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Equus caballus]
Length = 620
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 188/412 (45%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 214 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 273
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 274 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 315
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 316 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEIEIMKKLREAFEND 373
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A V AP P+ + G + +
Sbjct: 374 MLAVNQQANLIPGLNLSALGIFSTGLSMLPPPAGPRGVPPAPPYHPFATHSGYFSSLYPP 433
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+S P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 434 HQFSPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 491
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 492 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 544
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 545 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 592
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 446 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 504
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 505 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 549
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 550 GKTVNELQNLTSAEVIVPRDQ 570
>gi|357449597|ref|XP_003595075.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355484123|gb|AES65326.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 470
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 106/193 (54%), Gaps = 17/193 (8%)
Query: 23 PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
P ++R+ G P D V+R + P+ K+G IIGR G+++K+L +TK+++R+ +
Sbjct: 58 PPEQRWPG--------WPGDCVFRLIVPVGKVGGIIGRKGDLIKKLCDETKARVRVLDAD 109
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV--IAEELRGDEDSDGGHQV 140
G +R++ + + E+ + +SPA DA+ ++ RV ++E ++ G
Sbjct: 110 LGIPDRIILI-------SGKEELEAAISPAMDAVIRIFKRVSGLSETDSENKGPAGVTLC 162
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
+ +LLV S Q +IGK G I+++I+ +GA +R+L + + A + +V + GEA +
Sbjct: 163 SIRLLVASTQAISLIGKQGTIIRSIQESSGASVRVLSGDEVQYFATAEERIVDLQGEALM 222
Query: 201 VKKALCQIASRLH 213
V KAL + L
Sbjct: 223 VLKALEAVIGHLR 235
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 98/181 (54%), Gaps = 11/181 (6%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ PV +GG+IG+ G +I ++ E+ A ++V + D +I +S KE E +S
Sbjct: 72 FRLIVPVGKVGGIIGRKGDLIKKLCDETKARVRVLDADLGIPDRIILISGKEELEAAISP 131
Query: 346 TIEAVVRLQPRCSEKIERDS------GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
++AV+R+ R S E DS G+ + RLLV +++ LIGK G+II ++ +
Sbjct: 132 AMDAVIRIFKRVSGLSETDSENKGPAGVTLCSIRLLVASTQAISLIGKQGTIIRSIQESS 191
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPV 459
A++R+L + + A+ ++ +V + G+ + AL V+ LR L D + +PV
Sbjct: 192 GASVRVLSGDEVQYFATAEERIVDLQGEALMVLKALEAVIGHLRKFLVDH-----SILPV 246
Query: 460 F 460
+
Sbjct: 247 Y 247
>gi|338723967|ref|XP_001497902.3| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Equus caballus]
Length = 638
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 197/419 (47%), Gaps = 60/419 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 251 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 310
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 311 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 353
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + I G KA +I ++ ++N
Sbjct: 354 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITIKGNVETCAKAEEEIMKKIRESYEN 411
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 412 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 456
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S+ ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 457 QFEQQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 513
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 514 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 567
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 568 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 622
>gi|426227471|ref|XP_004007841.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Ovis aries]
Length = 580
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 197/419 (47%), Gaps = 60/419 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S+ ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 455
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 456 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 509
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 510 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 564
>gi|357140452|ref|XP_003571781.1| PREDICTED: uncharacterized protein LOC100836040 [Brachypodium
distachyon]
Length = 587
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 98/173 (56%), Gaps = 11/173 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P TV+R L K+G+IIG+ GE V++L +TK+ +R+ + ERVV ++
Sbjct: 59 PGTTVFRMLISSTKVGAIIGQKGERVRRLCEETKASVRVIGGHFAAAERVVLIF------ 112
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
A E D+ + PA DAL +V+ ++ ++ G SD V ++L+PS+Q +IG+ G
Sbjct: 113 -AKEQPDEPIPPAMDALLRVYQNIVNDDGLG-MGSDSA--VVTRILIPSEQALNLIGEQG 168
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
++ I + IR+L D +LP AL D +V+I G+ + V+KAL +A L
Sbjct: 169 SMINLIEEASQTDIRVL-DCNLPPAALDEDRIVEIWGQPTRVRKALELVARHL 220
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 94/180 (52%), Gaps = 15/180 (8%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
R++ +G +IG+ G + ++ +E+ A+++V + ++ + +KE ++ +
Sbjct: 64 FRMLISSTKVGAIIGQKGERVRRLCEETKASVRVIGGHFAAAERVVLIFAKEQPDEPIPP 123
Query: 346 TIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
++A++R+ + I D GL + TR+L+P+ + LIG+ GS+I + ++
Sbjct: 124 AMDALLRVY----QNIVNDDGLGMGSDSAVVTRILIPSEQALNLIGEQGSMINLIEEASQ 179
Query: 401 ANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
+IR+L NLP A ++D +V+I G + AL V LR L DR + +P+F
Sbjct: 180 TDIRVL-DCNLPPAALDEDRIVEIWGQPTRVRKALELVARHLRKYLVDR-----SVIPLF 233
>gi|73976022|ref|XP_863341.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 7 [Canis lupus familiaris]
Length = 580
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 197/419 (47%), Gaps = 60/419 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + + + ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQAPQTETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 455
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 456 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 509
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 510 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 564
>gi|348519757|ref|XP_003447396.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Oreochromis niloticus]
Length = 611
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 186/417 (44%), Gaps = 57/417 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+SK+ I + G+ E+ +T++S + +
Sbjct: 198 DFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPITIHSTPEGCS 257
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A A + + + A E + ED + K+L + +G +IGK G+
Sbjct: 258 A----------ACRMILDIMQKE-ANETKTTED------IPLKILAHNSLVGRLIGKEGR 300
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPS 217
++ I +TG +I I + L + + + G KA +I +L ++N
Sbjct: 301 NLKKIEEDTGTKITISSLQDL--TIYNPERTITVKGSIDACCKAEVEITKKLREAYENDI 358
Query: 218 RSQHLLASAISNSH------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
+ + A+ I + SSG V P AA P + P + P G + L
Sbjct: 359 AAINQQANLIPGLNLNALGIFSSGLPVLPPAAGPRSAV-PAVAPAGYNPFLSHSSHLSGL 417
Query: 272 YSAPRDDLSSKEFS--------LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
Y P + S + L P +G +IGK G I Q+ +GA+IK+ +
Sbjct: 418 YGVPPASAIPHQHSQQAPEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKI--AP 475
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPT 378
E D V+ + ++ T EA + Q R K++ ++ + T + VP+
Sbjct: 476 AESPD----VTERMVI---ITGTPEAQFKAQGRIFGKLKEENFFSAKEEVKLETHIKVPS 528
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEM-VQISGDLDLAKDA 434
S G +IGKGG + E++ LT A + I+P++ P E+DE+ V+ISG ++ A
Sbjct: 529 SAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENDEVFVKISGHFFASQTA 581
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 23/197 (11%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSASD 97
PE V P + +G++IG+ G+ +KQL + I+I P ER+V + + +
Sbjct: 434 APEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVII-TGTP 492
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
E G F ++ F + V ++ + VPS G VIGK
Sbjct: 493 EAQFKAQGRIFGKLKEENFFSAKEEV---------------KLETHIKVPSSAAGRVIGK 537
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKALCQIASRLHDNP 216
GG+ V +++ T A++ + +D+ +DE V+ISG + A +I +
Sbjct: 538 GGKTVNELQNLTSAEVIVPRDQ----TPDENDEVFVKISGHFFASQTAQRKIREIIQQVK 593
Query: 217 SRSQ-HLLASAISNSHS 232
+ Q H +A+S HS
Sbjct: 594 QQEQKHQQGAAVSPHHS 610
>gi|449274935|gb|EMC83962.1| Poly(rC)-binding protein 4 [Columba livia]
Length = 324
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 150/315 (47%), Gaps = 53/315 (16%)
Query: 40 PEDT------VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTV 92
PEDT R L ++IGSIIG+ GE VK++R + ++I I E GS ER+ T+
Sbjct: 14 PEDTELSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI 70
Query: 93 YSASDETNAFEDGDKFVSPAQDALFKVHDRV---IAEELRGDED--SDGGHQVTAKLLVP 147
++D A+F+ + + E+L D + G VT +L++P
Sbjct: 71 TGSTD-----------------AVFRAVSMIAFKLEEDLGAGSDGAAVGRSPVTLRLVIP 113
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQ 207
+ Q G +IGK G ++ IR TGAQ+++ D LP+ R+ V +SG + + Q
Sbjct: 114 ASQCGSLIGKAGAKIREIRESTGAQVQVAGDL-LPNSTERA---VTVSGVPDTIIHCVRQ 169
Query: 208 IASRLHDNPSRSQHLLASAISNSH-----SSSGSLVGPTAAT------PIVG--IAPLMG 254
I + + + P+ S A + H + SL+ + T P VG P+M
Sbjct: 170 ICAVILEVPTESPTQAWGAFPHQHGYLPPKMTLSLISWSPCTHQSPPNPAVGKHWHPIMT 229
Query: 255 -PYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQES 313
Y ++ T S SL P D SS+ S + P IG +IG+ G+ I++IRQ S
Sbjct: 230 DAYSYWRPTTPLLTSLSL--PPGLDTSSQNSSQEFLVPNDLIGCIIGRHGSKISEIRQMS 287
Query: 314 GAAIKVDSSSTEGDD 328
GA IK+ + TEG
Sbjct: 288 GAHIKIG-NQTEGSS 301
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 21/149 (14%)
Query: 266 DWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE 325
D + S+ +P D S +LR++ IG +IGK G + +IR++S A I + S
Sbjct: 5 DGASSVSGSPEDTELSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGS-- 62
Query: 326 GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS---------FTTRLLV 376
C ++ T++ + +AV R + K+E D G S T RL++
Sbjct: 63 ---CPERIT-------TITGSTDAVFRAVSMIAFKLEEDLGAGSDGAAVGRSPVTLRLVI 112
Query: 377 PTSRIGCLIGKGGSIITEMRRLTKANIRI 405
P S+ G LIGK G+ I E+R T A +++
Sbjct: 113 PASQCGSLIGKAGAKIREIRESTGAQVQV 141
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 30 GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEER 88
G D +G R + P + GS+IG+ G ++++R T +++++ G+ +P S ER
Sbjct: 93 GAGSDGAAVGRSPVTLRLVIPASQCGSLIGKAGAKIREIRESTGAQVQVAGDLLPNSTER 152
Query: 89 VVTVYSASD 97
VTV D
Sbjct: 153 AVTVSGVPD 161
>gi|300796214|ref|NP_001179217.1| insulin-like growth factor 2 mRNA-binding protein 3 [Bos taurus]
gi|296488613|tpg|DAA30726.1| TPA: insulin-like growth factor 2 mRNA binding protein 3 [Bos
taurus]
Length = 580
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 197/419 (47%), Gaps = 60/419 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAITPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S+ ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 455
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 456 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 509
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 510 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 564
>gi|410952456|ref|XP_003982896.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 2 [Felis catus]
Length = 580
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 197/419 (47%), Gaps = 60/419 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + + + ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQAPETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 455
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 456 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 509
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 510 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 564
>gi|403287927|ref|XP_003935171.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Saimiri boliviensis boliviensis]
Length = 579
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 198/423 (46%), Gaps = 61/423 (14%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYS 94
F P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S
Sbjct: 189 FKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILS 248
Query: 95 ASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ T+A A ++ ++ + A++++ E+ + K+L ++ +G +
Sbjct: 249 TPEGTSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRL 291
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL-- 212
IGK G+ ++ I +T +I I + L + + + G KA +I ++
Sbjct: 292 IGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRE 349
Query: 213 -HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
++N S +L A I + ++ L PT+ P T+G S
Sbjct: 350 SYENDIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMT 394
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
P+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D +
Sbjct: 395 PPYPQFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKV 451
Query: 332 TVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIG 386
+ ++ EA + Q R KI+ ++ + + + VP+ G +IG
Sbjct: 452 RMV-------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIG 504
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRL 442
KGG + E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T++
Sbjct: 505 KGGKTVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQV 560
Query: 443 RAN 445
+ +
Sbjct: 561 KQH 563
>gi|307196422|gb|EFN78011.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Harpegnathos
saltator]
Length = 647
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 183/397 (46%), Gaps = 47/397 (11%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQL------RIDTKSKIRIGETVPGSEERVVTVYSA 95
D R L +G+IIGR G ++Q+ R+D K +G S E+ +T+Y
Sbjct: 142 DFPLRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNVG-----SLEKAITIYGN 196
Query: 96 SDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
D TNA + + + + K +D + G +S +++T K+L ++ IG +
Sbjct: 197 PDNCTNACKKILEVMQQEANNTNKGYDEGSNSDDHGAVNS---YEITLKILAHNNLIGRI 253
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL-- 212
IGKGG ++ I +T +I + + S L + ++ + G + KA I+S+L
Sbjct: 254 IGKGGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGTIENMSKAESMISSKLRQ 311
Query: 213 -HDNPSRS---QHLLASAISNSHSSSGSLVGPTAATP-IVGIAPLMGPYGGYKGDTAGDW 267
++N ++ Q ++ + S + +G ++ P + G P PY G
Sbjct: 312 SYENDLQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQSSLQTQQG-- 369
Query: 268 SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
P D F L P ++G +IG G+ I I + SGA++K+ + E D
Sbjct: 370 ------VPASDTQETTF---LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKI--APLEQD 418
Query: 328 DCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRI 381
+ ++ T+ + E+ + Q EK+ R+ G +S T +LVP++++
Sbjct: 419 KPAEQQTERKV---TIVGSPESQWKAQYLIFEKM-REEGYVSGTEDVRLTIEILVPSAQV 474
Query: 382 GCLIGKGGSIITEMRRLTKANIRILPKENLPKIASED 418
G +IGKGG + E++R+T + I++ ++ P A E+
Sbjct: 475 GRIIGKGGQNVRELQRVTGSVIKLSEQQATPPSADEE 511
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 76/151 (50%), Gaps = 24/151 (15%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSE--ERVVTVYSA 95
++T + Y+ P +G+IIG G ++ + + + ++I + P + ER VT+ +
Sbjct: 376 QETTFLYI-PNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGS 434
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAE-ELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E + G ED ++T ++LVPS Q+G +
Sbjct: 435 PES-------------QWKAQYLIFEKMREEGYVSGTEDV----RLTIEILVPSAQVGRI 477
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
IGKGGQ V+ ++ TG+ I++ + + P A
Sbjct: 478 IGKGGQNVRELQRVTGSVIKLSEQQATPPSA 508
>gi|392339927|ref|XP_003753941.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Rattus norvegicus]
gi|392347297|ref|XP_003749789.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Rattus norvegicus]
gi|149033413|gb|EDL88214.1| insulin-like growth factor 2, binding protein 3 [Rattus norvegicus]
Length = 579
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 197/419 (47%), Gaps = 61/419 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 454
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 455 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 508
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 509 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 563
>gi|395830897|ref|XP_003788549.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Otolemur garnettii]
Length = 579
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 197/419 (47%), Gaps = 61/419 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 454
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 455 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 508
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 509 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 563
>gi|109067156|ref|XP_001098422.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 3 [Macaca mulatta]
gi|402863939|ref|XP_003896249.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Papio anubis]
Length = 579
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 197/419 (47%), Gaps = 61/419 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 454
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 455 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 508
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 509 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 563
>gi|73976012|ref|XP_539474.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 1 [Canis lupus familiaris]
Length = 579
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 197/419 (47%), Gaps = 61/419 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 454
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 455 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 508
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 509 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 563
>gi|301771918|ref|XP_002921377.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 1 [Ailuropoda melanoleuca]
Length = 579
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 197/419 (47%), Gaps = 61/419 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 454
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 455 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 508
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 509 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 563
>gi|30795212|ref|NP_006538.2| insulin-like growth factor 2 mRNA-binding protein 3 [Homo sapiens]
gi|114612360|ref|XP_001157593.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 4 [Pan troglodytes]
gi|397472938|ref|XP_003807987.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3 [Pan
paniscus]
gi|254763311|sp|O00425.2|IF2B3_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3; AltName:
Full=IGF-II mRNA-binding protein 3; AltName: Full=KH
domain-containing protein overexpressed in cancer;
Short=hKOC; AltName: Full=VICKZ family member 3
gi|4191612|gb|AAD09828.1| IGF-II mRNA-binding protein 3 [Homo sapiens]
gi|40807047|gb|AAH65269.1| Insulin-like growth factor 2 mRNA binding protein 3 [Homo sapiens]
gi|51095013|gb|EAL24257.1| IGF-II mRNA-binding protein 3 [Homo sapiens]
gi|119614193|gb|EAW93787.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_b
[Homo sapiens]
gi|261861412|dbj|BAI47228.1| insulin-like growth factor 2 mRNA binding protein 3 [synthetic
construct]
gi|410216456|gb|JAA05447.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410260770|gb|JAA18351.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410287810|gb|JAA22505.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410334615|gb|JAA36254.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
Length = 579
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 197/419 (47%), Gaps = 61/419 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 454
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 455 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 508
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 509 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 563
>gi|301771920|ref|XP_002921378.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 2 [Ailuropoda melanoleuca]
Length = 582
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 197/421 (46%), Gaps = 62/421 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDL--SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
+ SS+ ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 HNSFTRSSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRM 456
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKG 388
++ EA + Q R KI+ ++ + + + VP+ G +IGKG
Sbjct: 457 V-------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKG 509
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRA 444
G + E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++
Sbjct: 510 GKTVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQ 565
Query: 445 N 445
+
Sbjct: 566 H 566
>gi|410952454|ref|XP_003982895.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Felis catus]
Length = 579
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 197/419 (47%), Gaps = 61/419 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 454
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 455 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 508
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 509 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 563
>gi|357147442|ref|XP_003574345.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 1-like
[Brachypodium distachyon]
Length = 447
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 100/180 (55%), Gaps = 15/180 (8%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D+V+R + P+ K+GSIIGR GE++K+L +TK+++R+ + G+ ERVV V
Sbjct: 44 PGDSVFRMVVPVXKVGSIIGRKGELIKRLVEETKARVRVLDGPVGATERVVLV------- 96
Query: 100 NAFEDGDKFVSPAQDALFKVHDRV-----IAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ E+ + PA DAL +V RV +A + + G A+LLVP Q +
Sbjct: 97 SGKEEPGLDLPPAMDALIRVFKRVNGITDVAADSTTQTAAPPG-VCAARLLVPGAQAINL 155
Query: 155 IGKGGQIVQNIRSETGAQIRILK-DEHLPSCALRSDE-LVQISGEASVVKKALCQIASRL 212
IGK G ++ I+ TGA IR++ DE + DE +V+I GE V KAL +++ L
Sbjct: 156 IGKQGASIKAIQEGTGATIRVISIDERERPFYVTDDERIVEIQGETEKVLKALQAVSNHL 215
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 15/185 (8%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
R+V PV +G +IG+ G +I ++ +E+ A ++V + ++ VS KE L
Sbjct: 49 FRMVVPVXKVGSIIGRKGELIKRLVEETKARVRVLDGPVGATERVVLVSGKEEPGLDLPP 108
Query: 346 TIEAVVRLQPRCS--EKIERDSGLISF------TTRLLVPTSRIGCLIGKGGSIITEMRR 397
++A++R+ R + + DS + RLLVP ++ LIGK G+ I ++
Sbjct: 109 AMDALIRVFKRVNGITDVAADSTTQTAAPPGVCAARLLVPGAQAINLIGKQGASIKAIQE 168
Query: 398 LTKANIRILP--KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVST 455
T A IR++ + P ++D+ +V+I G+ + AL V LR L D +
Sbjct: 169 GTGATIRVISIDERERPFYVTDDERIVEIQGETEKVLKALQAVSNHLRKFLVDH-----S 223
Query: 456 FVPVF 460
+P+F
Sbjct: 224 VLPLF 228
>gi|296209450|ref|XP_002751548.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Callithrix jacchus]
Length = 579
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 197/419 (47%), Gaps = 61/419 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 454
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 455 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 508
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 509 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 563
>gi|395738667|ref|XP_003780758.1| PREDICTED: LOW QUALITY PROTEIN: insulin-like growth factor 2
mRNA-binding protein 3 [Pongo abelii]
Length = 567
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 197/419 (47%), Gaps = 61/419 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 181 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 240
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 241 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 283
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 284 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 341
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 342 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 386
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 387 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 442
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 443 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 496
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 497 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 551
>gi|119614192|gb|EAW93786.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_a
[Homo sapiens]
Length = 422
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 197/419 (47%), Gaps = 61/419 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 36 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 95
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 96 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 138
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 139 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 196
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 197 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 241
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 242 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 297
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 298 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 351
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 352 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 406
>gi|344270303|ref|XP_003406985.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Loxodonta africana]
Length = 492
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 197/419 (47%), Gaps = 61/419 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 106 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 165
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 166 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 208
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 209 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSVETCAKAEEEIMKKIRESYEN 266
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 267 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 311
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 312 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 367
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 368 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 421
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 422 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 476
>gi|348564372|ref|XP_003467979.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Cavia porcellus]
Length = 741
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 197/417 (47%), Gaps = 62/417 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 356 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 415
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 416 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 458
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 459 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSVETCAKAEEEIMKKIRESYEN 516
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P P GP ++ P
Sbjct: 517 DIASMNLQAHLIPGLNLNALGLFPPTSGMP----PPTSGP------------PSAMPPYP 560
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 561 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 616
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 617 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 670
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLR 443
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++
Sbjct: 671 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVK 723
>gi|348519763|ref|XP_003447399.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 4 [Oreochromis niloticus]
Length = 584
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 187/409 (45%), Gaps = 68/409 (16%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+SK+ I + G+ E+ +T++S + +
Sbjct: 198 DFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPITIHSTPEGCS 257
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A A + + + A E + ED + K+L + +G +IGK G+
Sbjct: 258 A----------ACRMILDIMQKE-ANETKTTED------IPLKILAHNSLVGRLIGKEGR 300
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPS 217
++ I +TG +I I + L + + + G KA +I +L ++N
Sbjct: 301 NLKKIEEDTGTKITISSLQDL--TIYNPERTITVKGSIDACCKAEVEITKKLREAYENDI 358
Query: 218 RSQHLLASAISNSH------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
+ + A+ I + SSG V P AA P I P ++ + S+S
Sbjct: 359 AAINQQANLIPGLNLNALGIFSSGLPVLPPAAGPPTRIPP-----------SSPEMSQS- 406
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
AP ++ + L P +G +IGK G I Q+ +GA+IK+ + E D
Sbjct: 407 --APEQEV------VYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKI--APAESPD--- 453
Query: 332 TVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIG 386
V+ + ++ T EA + Q R K++ ++ + T + VP+S G +IG
Sbjct: 454 -VTERMVI---ITGTPEAQFKAQGRIFGKLKEENFFSAKEEVKLETHIKVPSSAAGRVIG 509
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEM-VQISGDLDLAKDA 434
KGG + E++ LT A + I+P++ P E+DE+ V+ISG ++ A
Sbjct: 510 KGGKTVNELQNLTSAEV-IVPRDQTP---DENDEVFVKISGHFFASQTA 554
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 23/197 (11%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSASD 97
PE V P + +G++IG+ G+ +KQL + I+I P ER+V + + +
Sbjct: 407 APEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVII-TGTP 465
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
E G F ++ F + V ++ + VPS G VIGK
Sbjct: 466 EAQFKAQGRIFGKLKEENFFSAKEEV---------------KLETHIKVPSSAAGRVIGK 510
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKALCQIASRLHDNP 216
GG+ V +++ T A++ + +D+ +DE V+ISG + A +I +
Sbjct: 511 GGKTVNELQNLTSAEVIVPRDQ----TPDENDEVFVKISGHFFASQTAQRKIREIIQQVK 566
Query: 217 SRSQ-HLLASAISNSHS 232
+ Q H +A+S HS
Sbjct: 567 QQEQKHQQGAAVSPHHS 583
>gi|255071283|ref|XP_002507723.1| predicted protein [Micromonas sp. RCC299]
gi|226522998|gb|ACO68981.1| predicted protein [Micromonas sp. RCC299]
Length = 287
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 132/282 (46%), Gaps = 46/282 (16%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKI---RIGETVPGSEERVVTVYSASDE 98
+ ++L P GSIIG+GG V +L+ T S+I R E PG+++R+VTVY +
Sbjct: 2 NITLKFLLPDSAAGSIIGKGGATVNELQSQTGSRIQLSRATEVFPGTKDRIVTVYGTA-- 59
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
P+ F + +I++ +R E GG KL++P+ GC+IG+G
Sbjct: 60 ------------PSILGAFHL---MISKLVRDGEGLVGGRP-HVKLVIPNASCGCIIGRG 103
Query: 159 GQIVQNIRSETGAQIRILKDEH-LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
G ++N ++ A+I++ EH LP ++ ++ I+G V +A+
Sbjct: 104 GATIRNFADDSQAEIKLSSQEHMLPGV---NERVLTITGANDRVLRAIA----------- 149
Query: 218 RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD 277
L+A+A+S + P+ T I + PY G D A + ++
Sbjct: 150 ----LVATALSQDGCYEELISRPSTYT----IDGMPMPYSGINNDFAAAVNHNVEHGRSQ 201
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D S+ + P +IG V+GKGG I++I+ SG IKV
Sbjct: 202 D--GDVISVAIDVPDEHIGAVLGKGGRTISEIQITSGIRIKV 241
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 88/164 (53%), Gaps = 14/164 (8%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
+L+ + P + G +IGKGGA +N+++ ++G+ I++ S +TE + +K+ T
Sbjct: 2 NITLKFLLPDSAAGSIIGKGGATVNELQSQTGSRIQL-SRATE-----VFPGTKDRIV-T 54
Query: 343 LSATIEAVVRLQPRCSEKIERD-SGLISF--TTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
+ T +++ K+ RD GL+ +L++P + GC+IG+GG+ I +
Sbjct: 55 VYGTAPSILGAFHLMISKLVRDGEGLVGGRPHVKLVIPNASCGCIIGRGGATIRNFADDS 114
Query: 400 KANIRILPKEN-LPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
+A I++ +E+ LP + ++ ++ I+G D A+ V T L
Sbjct: 115 QAEIKLSSQEHMLPGV---NERVLTITGANDRVLRAIALVATAL 155
>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
Length = 861
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 64/96 (66%), Gaps = 4/96 (4%)
Query: 330 LITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGG 389
LI VSS+E +D +S TIEA++ L + S E TTRL+VP++++GC++G+GG
Sbjct: 549 LIVVSSQEIPDDPVSPTIEALILLHSKASTLAENHQ----LTTRLVVPSNKVGCILGEGG 604
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQIS 425
+ITEMRR T A IR+ K + PK S D+E+VQ S
Sbjct: 605 KVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQAS 640
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 19/114 (16%)
Query: 84 GSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDR--VIAEELRGDEDSDGGHQVT 141
SEER++ V S E D VSP +AL +H + +AE HQ+T
Sbjct: 544 ASEERLIVVSSQ-------EIPDDPVSPTIEALILLHSKASTLAEN----------HQLT 586
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
+L+VPS+++GC++G+GG+++ +R TGA+IR+ P +ELVQ S
Sbjct: 587 TRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQAS 640
>gi|328720738|ref|XP_001949210.2| PREDICTED: poly(rC)-binding protein 3-like [Acyrthosiphon pisum]
Length = 436
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 154/334 (46%), Gaps = 44/334 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L R++G++IG+GGE VK +R + +++ I + + ER+VT+ + TNA
Sbjct: 24 RILFHGREVGNVIGKGGETVKNIRDQSGARVLISDG--STPERIVTI---TGTTNAICKA 78
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-VTAKLLVPSDQIGCVIGKGGQIVQN 164
+ + + F+ R + D +G +T KL+VP+ Q G +IGKGG ++
Sbjct: 79 TELIGLKVEEFFE----------RQNGDWNGPKAPLTFKLIVPASQCGFIIGKGGCKIKE 128
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLA 224
IR +GA I++ D LP+ ++ LV I+G + + + Q+ + L D+P RS +
Sbjct: 129 IRESSGAAIQVASD-MLPNS---TERLVSITGTTGTISQCVYQVCNVLLDSPPRSATIPY 184
Query: 225 SAISNSHSSSGSLVG---------PTAATPIVGIA---------PLMGPYGGYKGDTAGD 266
S + + S VG P A+ +G+ + G + T
Sbjct: 185 DPRSKTSGFASSAVGNDFGRQRTNPLASLAALGLGTASTGGINPAALAALAGSQLRTGNR 244
Query: 267 WSRSLYSAPRDDLS-SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-----D 320
+R+ ++ S S ++ + P IG VIG+ G+ I +IRQ SGA + +
Sbjct: 245 QNRNGSGEHKNQNSNSNTETISMTVPNDLIGCVIGRRGSKIAEIRQISGALVHIAKGEGT 304
Query: 321 SSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ 354
+ E +D IT++ + IE V LQ
Sbjct: 305 HENGENEDRHITITGNKDSISVAKYLIEMSVELQ 338
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 17/171 (9%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+D + ++R++ +G VIGKGG + IR +SGA + + ST + ++T++
Sbjct: 14 NDYNDVNLTIRILFHGREVGNVIGKGGETVKNIRDQSGARVLISDGSTP--ERIVTITG- 70
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS-----FTTRLLVPTSRIGCLIGKGGSI 391
T +A +A + + E ER +G + T +L+VP S+ G +IGKGG
Sbjct: 71 -----TTNAICKATELIGLKVEEFFERQNGDWNGPKAPLTFKLIVPASQCGFIIGKGGCK 125
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
I E+R + A I++ + LP + + +V I+G + QV L
Sbjct: 126 IKEIRESSGAAIQVA-SDMLP---NSTERLVSITGTTGTISQCVYQVCNVL 172
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 61/183 (33%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
+T ++L ++G VIGKGG+ V+NIR ++GA++ ++ D P + +V I+G
Sbjct: 20 NLTIRILFHGREVGNVIGKGGETVKNIRDQSGARV-LISDGSTP------ERIVTITGTT 72
Query: 199 SVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGG 258
+ + KA I ++ + R
Sbjct: 73 NAICKATELIGLKVEEFFERQN-------------------------------------- 94
Query: 259 YKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIK 318
GDW + P+ L + +L+ P + G +IGKGG I +IR+ SGAAI+
Sbjct: 95 ------GDW-----NGPKAPL-----TFKLIVPASQCGFIIGKGGCKIKEIRESSGAAIQ 138
Query: 319 VDS 321
V S
Sbjct: 139 VAS 141
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 92/236 (38%), Gaps = 68/236 (28%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV---------- 92
++ + P + G IIG+GG +K++R + + I++ + +P S ER+V++
Sbjct: 105 TFKLIVPASQCGFIIGKGGCKIKEIRESSGAAIQVASDMLPNSTERLVSITGTTGTISQC 164
Query: 93 -------------------YSASDETNAFED---GDKF---------------------- 108
Y +T+ F G+ F
Sbjct: 165 VYQVCNVLLDSPPRSATIPYDPRSKTSGFASSAVGNDFGRQRTNPLASLAALGLGTASTG 224
Query: 109 -VSPAQDALFKVHDRVIAEELRGDEDSDGGHQV--------TAKLLVPSDQIGCVIGKGG 159
++PA AL + + R + + G H+ T + VP+D IGCVIG+ G
Sbjct: 225 GINPA--ALAALAGSQLRTGNRQNRNGSGEHKNQNSNSNTETISMTVPNDLIGCVIGRRG 282
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG--EASVVKKALCQIASRLH 213
+ IR +GA + I K E D + I+G ++ V K L +++ L
Sbjct: 283 SKIAEIRQISGALVHIAKGEGTHENGENEDRHITITGNKDSISVAKYLIEMSVELQ 338
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 359 EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASED 418
E ++S + T + VP IGC+IG+ GS I E+R+++ A + I E + +
Sbjct: 252 EHKNQNSNSNTETISMTVPNDLIGCVIGRRGSKIAEIRQISGALVHIAKGEGTHENGENE 311
Query: 419 DEMVQISGDLDLAKDA--LIQVMTRL-RANL 446
D + I+G+ D A LI++ L +ANL
Sbjct: 312 DRHITITGNKDSISVAKYLIEMSVELQKANL 342
>gi|224097170|ref|XP_002310862.1| predicted protein [Populus trichocarpa]
gi|222853765|gb|EEE91312.1| predicted protein [Populus trichocarpa]
Length = 245
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 117/239 (48%), Gaps = 23/239 (9%)
Query: 193 QISGEASV-VKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
+I+G +SV +KKA+ + S L D P + + S + ++ P+ + P
Sbjct: 6 KITGSSSVAIKKAVIDVTSCLQDCPPYEK----DEVDLSLGAGRRRRSGSSGEPMCSLLP 61
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
GD + P + + R++C G +IG GG+++ ++
Sbjct: 62 TYSENIATDGD---------HKKPNEQ---SQVQFRMICSHGAAGRIIGTGGSVVRALQN 109
Query: 312 ESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK-IERDSGL--- 367
++GA+I T DD L+TVS+ E E + S A++ + R E IER L
Sbjct: 110 QTGASIIFARPITNSDDRLVTVSALENLESSHSPAQNALLLVFARSIEHDIERARSLGLI 169
Query: 368 --ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQI 424
I+ T LL+P++++ CLIG+GG + +EM T A+I+I+ + +AS++D +VQ+
Sbjct: 170 EEITVTATLLLPSNKVYCLIGRGGRVDSEMIETTGADIQIMQGDQFFDLASKNDAVVQV 228
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 83/152 (54%), Gaps = 9/152 (5%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R +C G IIG GG +V+ L+ T + I + S++R+VTV +A E+
Sbjct: 84 FRMICSHGAAGRIIGTGGSVVRALQNQTGASIIFARPITNSDDRLVTV-------SALEN 136
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ--VTAKLLVPSDQIGCVIGKGGQIV 162
+ SPAQ+AL V R I ++ + VTA LL+PS+++ C+IG+GG++
Sbjct: 137 LESSHSPAQNALLLVFARSIEHDIERARSLGLIEEITVTATLLLPSNKVYCLIGRGGRVD 196
Query: 163 QNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
+ TGA I+I++ + A ++D +VQ+
Sbjct: 197 SEMIETTGADIQIMQGDQFFDLASKNDAVVQV 228
>gi|218184819|gb|EEC67246.1| hypothetical protein OsI_34185 [Oryza sativa Indica Group]
Length = 470
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 64/96 (66%), Gaps = 4/96 (4%)
Query: 330 LITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGG 389
LI VSS+E +D +S TIEA++ L + S E TTRL+VP++++GC++G+GG
Sbjct: 226 LIVVSSQEIPDDPVSPTIEALILLHSKVSTLAENHQ----LTTRLVVPSNKVGCILGEGG 281
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQIS 425
+ITEMRR T A IR+ K + PK S D+E+VQ S
Sbjct: 282 KVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQAS 317
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 19/114 (16%)
Query: 84 GSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV--IAEELRGDEDSDGGHQVT 141
SEER++ V S E D VSP +AL +H +V +AE HQ+T
Sbjct: 221 ASEERLIVVSSQ-------EIPDDPVSPTIEALILLHSKVSTLAEN----------HQLT 263
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
+L+VPS+++GC++G+GG+++ +R TGA+IR+ P +ELVQ S
Sbjct: 264 TRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQAS 317
>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 952
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 63/94 (67%), Gaps = 4/94 (4%)
Query: 330 LITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGG 389
LI VSS+E +D +S TIEA++ L + S E TTRL+VP++++GC++G+GG
Sbjct: 567 LIVVSSQEIPDDPVSPTIEALILLHSKASTLAENHQ----LTTRLVVPSNKVGCILGEGG 622
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQ 423
+ITEMRR T A IR+ K + PK S D+E+VQ
Sbjct: 623 KVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQ 656
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 19/112 (16%)
Query: 84 GSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDR--VIAEELRGDEDSDGGHQVT 141
SEER++ V S E D VSP +AL +H + +AE HQ+T
Sbjct: 562 ASEERLIVVSSQ-------EIPDDPVSPTIEALILLHSKASTLAEN----------HQLT 604
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
+L+VPS+++GC++G+GG+++ +R TGA+IR+ P +ELVQ
Sbjct: 605 TRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQ 656
>gi|332242549|ref|XP_003270447.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Nomascus leucogenys]
Length = 579
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 198/416 (47%), Gaps = 55/416 (13%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G+ ++ I +T +I I + L + + + G KA +I ++ ++
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSVETCAKAEEEIMKKIRES--- 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +AS +H G + +G+ P P G T+G S P+ +
Sbjct: 351 YENDIASMNVQTHLIPGLNLND------LGLFP---PTSGMPPPTSGPPSAMTPPYPQFE 401
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 402 QSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV---- 454
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG +
Sbjct: 455 ---IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 512 ELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 563
>gi|357508127|ref|XP_003624352.1| KH domain-containing protein [Medicago truncatula]
gi|355499367|gb|AES80570.1| KH domain-containing protein [Medicago truncatula]
Length = 188
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 47/55 (85%)
Query: 369 SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQ 423
S ++V + IGCLIGKGGSIITEMRRLT++NIRIL KENLPKIAS+DDEMVQ
Sbjct: 29 SMGKAVIVAANMIGCLIGKGGSIITEMRRLTRSNIRILSKENLPKIASDDDEMVQ 83
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
+L +E + GH + ++V ++ IGC+IGKGG I+ +R T + IRIL E+LP A
Sbjct: 17 QLLQEELTKIGHSMGKAVIVAANMIGCLIGKGGSIITEMRRLTRSNIRILSKENLPKIAS 76
Query: 187 RSDELVQ 193
DE+VQ
Sbjct: 77 DDDEMVQ 83
>gi|2105469|gb|AAC35208.1| putative RNA binding protein KOC [Homo sapiens]
gi|4098297|gb|AAD09223.1| Koc1 [Homo sapiens]
Length = 579
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 196/419 (46%), Gaps = 61/419 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQSETE-TVHQFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 454
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 455 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 508
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 509 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 563
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 42/186 (22%)
Query: 35 QFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTV- 92
QF +TV++++ P +G+IIG+ G+ +KQL + I+I P ++ R+V +
Sbjct: 399 QFEQSETETVHQFI-PALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIIT 457
Query: 93 ------YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+ A + FVSP ++ + H RV
Sbjct: 458 GPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRV----------------------- 494
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKAL 205
PS G VIGKGG+ V +++ + A++ + +D+ +D+ +V+I+G
Sbjct: 495 PSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQ----TPDENDQVVVKITGHFYA----- 545
Query: 206 CQIASR 211
CQ+A R
Sbjct: 546 CQVAQR 551
>gi|432110248|gb|ELK34019.1| Poly(rC)-binding protein 3 [Myotis davidii]
Length = 347
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 28/283 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 59 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 110
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 111 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 165
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + +
Sbjct: 166 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 221
Query: 226 AISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFS 285
S+ G A T + G Y D + + +S+ D S +
Sbjct: 222 P--KPASTPVIFAGGQAYT-------IQGQYAIPHPDVSFHFVCLPFSSCLDA-SPPAST 271
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
L P IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 272 HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-ANATEGSS 313
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 97/235 (41%), Gaps = 67/235 (28%)
Query: 92 VYSASDETNAFEDGDKFVSPAQDAL-----FKVHDRVIAEELRGDEDSDGGHQVTA--KL 144
++S F GD +P+ L F H + + S+GG VT +L
Sbjct: 1 MFSVISSCAFFFPGDTIWAPSILPLGTLGTFSHHLQTHFGRKMESKVSEGGLNVTLTIRL 60
Query: 145 LVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
L+ ++G +IGK G+ V+ +R E+GA+I I + +C R +V I+G + KA
Sbjct: 61 LMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---IVTITGPTDAIFKA 113
Query: 205 LCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTA 264
IA + ++ I NS S+S P + P V
Sbjct: 114 FAMIAYKFEED-----------IINSMSNS-----PATSKPPV----------------- 140
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+LRLV P + G +IGKGG+ I +IR+ +GA ++V
Sbjct: 141 --------------------TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 175
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 102/222 (45%), Gaps = 33/222 (14%)
Query: 249 IAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQ 308
I PL G G + + R + S + + ++RL+ +G +IGK G + +
Sbjct: 22 ILPL-GTLGTFSHHLQTHFGRKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKK 80
Query: 309 IRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERD---- 364
+R+ESGA I + +EG+ C + T++ +A+ + + K E D
Sbjct: 81 MREESGARINI----SEGN-CPERIV-------TITGPTDAIFKAFAMIAYKFEEDIINS 128
Query: 365 ------SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASED 418
+ T RL+VP S+ G LIGKGGS I E+R T A +++ + LP +
Sbjct: 129 MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NST 184
Query: 419 DEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVSTFVP 458
+ V ISG DA+IQ + ++ + + +GA + P
Sbjct: 185 ERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIPYRP 222
>gi|426217762|ref|XP_004003121.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Ovis aries]
Length = 556
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 175/388 (45%), Gaps = 72/388 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ I ETG +I I + L + + + G A +I +L + +
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLRE--AFE 350
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+LA+ N+HS S + P GP+ + +S P ++
Sbjct: 351 NDMLAA---NTHSGYFSSLCPPHQ---------FGPFPHH------------HSYPEQEI 386
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
+ L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 387 ------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI 434
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITE 394
++ EA + Q R K++ ++ + + VP+S G +IGKGG + E
Sbjct: 435 ---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 491
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMV 422
++ LT A + I+P++ P E++E++
Sbjct: 492 LQNLTSAEV-IVPRDQTP---DENEEVI 515
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 382 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 440
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 441 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 485
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 486 GKTVNELQNLTSAEVIVPRDQ 506
>gi|395839825|ref|XP_003792776.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Otolemur garnettii]
Length = 597
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 191/423 (45%), Gaps = 59/423 (13%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
DH ++ + G + + I D R L P + +G+IIG+ G +K + T+S++ I
Sbjct: 173 DHSSREQGHGGSSQARQI----DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIH 228
Query: 80 -ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGG 137
+ G+ E+ VT+++ + T+ +A R+I E ++ + D +
Sbjct: 229 RKENSGAAEKPVTIHATPEGTS-------------EAC-----RMILEIMQKEADETKLA 270
Query: 138 HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGE 197
++ K+L + +G +IGK G+ ++ I ETG +I I + L + + + G
Sbjct: 271 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGT 328
Query: 198 ASVVKKALCQIASRLHD---NPSRSQHLLASAISNSHSSSGSL--VGPTAATPIVGI--A 250
A +I +L + N + + A+ I + S+ + G + P G A
Sbjct: 329 VEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPSGPRGA 388
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGA 304
P PY + T + SLY P ++ + L P +G +IGK GA
Sbjct: 389 PPAAPYHPFA--THSGYFSSLYPHHQFSPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGA 446
Query: 305 IINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERD 364
I Q+ + +GA+IK+ + EG D VS + ++ EA + Q R K++ +
Sbjct: 447 HIKQLARFAGASIKI--APAEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEE 497
Query: 365 SGL-----ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDD 419
+ + + VP+S G +IGKGG + E++ LT A + I+P++ P E++
Sbjct: 498 NFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENE 553
Query: 420 EMV 422
E++
Sbjct: 554 EVI 556
>gi|426218401|ref|XP_004003435.1| PREDICTED: poly(rC)-binding protein 3 isoform 4 [Ovis aries]
Length = 332
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 142/302 (47%), Gaps = 39/302 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + ++ +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPRKGVTVVVA 179
Query: 226 ----------AISNSHSSSGSLVGPTA--------ATPIVGIAPLMGPYGGYKG-DTAGD 266
A +++ G P A PL + G D A
Sbjct: 180 PKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGTDRAVP 239
Query: 267 WSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
+ RS ++ D S + L P IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 240 FVRSPWAC--LDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-ANATEG 296
Query: 327 DD 328
Sbjct: 297 SS 298
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 34/188 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD--RE 450
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + R+
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPRK 172
Query: 451 GAVSTFVP 458
G P
Sbjct: 173 GVTVVVAP 180
>gi|301786262|ref|XP_002928556.1| PREDICTED: RNA-binding protein Nova-2-like [Ailuropoda melanoleuca]
Length = 329
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 140/302 (46%), Gaps = 50/302 (16%)
Query: 25 KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET--- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 23 KRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 74
Query: 82 VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQV 140
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 75 YPGTTERVCLVQGTAEALNAVHS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK 131
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 132 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQ 188
Query: 201 VKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYK 260
V KA+ I ++ ++P S L + S ++ GP A + P G
Sbjct: 189 VHKAVSAIVQKVQEDPQSSSCL--------NISYANVAGPVANS---------NPTG--- 228
Query: 261 GDTAGDWSRSLYSAPRD--DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIK 318
S Y++P D S+KE + + P +G ++GKGG + + ++ +GA I+
Sbjct: 229 ---------SPYASPADLAAESAKEL-VEIAVPENLVGAILGKGGKTLVEYQELTGARIQ 278
Query: 319 VD 320
+
Sbjct: 279 IS 280
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 92 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 149
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 150 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 201
>gi|148223740|ref|NP_001083021.1| poly(rC)-binding protein 3 [Danio rerio]
gi|134025331|gb|AAI35089.1| Zgc:162999 protein [Danio rerio]
Length = 350
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 142/317 (44%), Gaps = 46/317 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I + E ER+VT+ +D
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREESSARINVSEG--NCPERIVTITGPTDAI------ 70
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ +
Sbjct: 71 --FKAFAMIA-YKFEEDIINS--MSNSQATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 125
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS-------R 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P R
Sbjct: 126 RESTGAQVQVAGD-MLPNSTERA---VTISGTPEAIIQCVKQICVVMLESPPKGATIPYR 181
Query: 219 SQHLLASAI-SNSHSSSGSLVGPTAAT--------PIVGIAPLMGPYGGYKGDTAGDWSR 269
+ A I S + +L P A P+ + G Y D
Sbjct: 182 PKPATAPVIFSGGQVRADTLTAPATANLSLLLQHQPLPAYT-IQGQYAIPHPDLTKLHQL 240
Query: 270 SLYSAPRD------------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAI 317
++ P D SS+ + L P IG +IG+ G IN+IRQ SGA I
Sbjct: 241 AMQQTPFTSLGQTTPAFPGVDASSQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQI 300
Query: 318 KVDSSSTEGDDCLITVS 334
K+ ++ D IT++
Sbjct: 301 KIANAMEGSSDRQITIT 317
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 71/222 (31%)
Query: 133 DSDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
S+GG VT +LL+ ++G +IGK G+ V+ +R E+ A+I + + +C R
Sbjct: 7 QSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESSARINVSEG----NCPER--- 59
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+V I+G + KA IA + ++ + +++SNS ++S V
Sbjct: 60 IVTITGPTDAIFKAFAMIAYKFEED-------IINSMSNSQATSKPPV------------ 100
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
+LRLV P + G +IGKGG+ I ++R
Sbjct: 101 ----------------------------------TLRLVVPASQCGSLIGKGGSKIKEMR 126
Query: 311 QESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR 352
+ +GA ++V D L + + T+S T EA+++
Sbjct: 127 ESTGAQVQV------AGDMLPNSTERAV---TISGTPEAIIQ 159
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ES A I V +EG+ C + T+
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESSARINV----SEGN-CPERIV-------TI 63
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 64 TGPTDAIFKAFAMIAYKFEEDIINSMSNSQATSKPPVTLRLVVPASQCGSLIGKGGSKIK 123
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
EMR T A +++ + LP + + V ISG +A+IQ + ++ + + +G
Sbjct: 124 EMRESTGAQVQVA-GDMLP---NSTERAVTISG----TPEAIIQCVKQICVVMLESPPKG 175
Query: 452 AVSTFVP 458
A + P
Sbjct: 176 ATIPYRP 182
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T +L +P+D IGC+IG+ G + IR +GAQI+I + SD + I+G +
Sbjct: 268 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-----AMEGSSDRQITITGTPAN 322
Query: 201 VKKALCQIASRLHD 214
+ A I +R D
Sbjct: 323 ISLAQYLINARFRD 336
>gi|301759725|ref|XP_002915743.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Ailuropoda melanoleuca]
Length = 556
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 175/388 (45%), Gaps = 72/388 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ I ETG +I I + L + + + G A +I +L + +
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLRE--AFE 350
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+LA N+HS S + P GP+ + +S P ++
Sbjct: 351 NDMLAV---NTHSGYFSSLYPPHQ---------FGPFPHH------------HSYPEQEI 386
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
+ L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 387 ------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI 434
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITE 394
++ EA + Q R K++ ++ + + VP+S G +IGKGG + E
Sbjct: 435 ---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 491
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMV 422
++ LT A + I+P++ P E++E++
Sbjct: 492 LQNLTSAEV-IVPRDQTP---DENEEVI 515
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 382 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 440
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 441 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 485
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 486 GKTVNELQNLTSAEVIVPRDQ 506
>gi|345309017|ref|XP_001516066.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 679
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 194/445 (43%), Gaps = 73/445 (16%)
Query: 23 PNKRRYTGDDRDQFII-------GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSK 75
P + R G R+Q P D R L P + +G+IIG+ G +K L T+SK
Sbjct: 245 PQRTRRGGHSREQGQYPGSSTQPKPLDFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSK 304
Query: 76 IRIG-ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDED- 133
+ I + G+ E+ +T+++ + ++ +A R+I E ++ + D
Sbjct: 305 VDIHRKENAGAAEKPITIHATPEGSS-------------EAC-----RLILEIMQKEADE 346
Query: 134 SDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
+ ++ K+L + +G +IGK G+ ++ I +TG +I I + L + +
Sbjct: 347 TKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDL--TIYNPERTIT 404
Query: 194 ISGEASVVKKALCQIASRL---HDNPSRSQHLLASAI-----------SNSHSSSGSLVG 239
+ G A +I +L ++N + + A+ I S S S G
Sbjct: 405 VKGSIEACSNAEVEIMKKLREAYENDVVAVNQQANLIPGLNLSALGIFSTGLSMLPSTAG 464
Query: 240 PTAATPIVGIAPLMG--PY--GGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANI 295
P AT P PY G Y G + +S P ++ + L P +
Sbjct: 465 PHGATAASPYNPFASHSPYLSGLYGASRVGAFPHQ-HSVPEQEV------VNLFIPTQAV 517
Query: 296 GGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQP 355
G +IGK G I Q+ + +GA+IK+ + EG D +S+ ++ EA + Q
Sbjct: 518 GAIIGKKGQHIKQLARFAGASIKI--APAEGPD-----ASERMV--IITGPPEAQFKAQG 568
Query: 356 RCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKEN 410
R K++ ++ + + VP+S G +IGKGG + E++ LT A + I+P++
Sbjct: 569 RIFGKLKEENFFNPKEEVKLEAHIKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ 627
Query: 411 LPKIASEDDE-MVQISGDLDLAKDA 434
P E++E +V+I G ++ A
Sbjct: 628 TP---DENEEVIVKIIGHFFASQTA 649
>gi|410970837|ref|XP_003991883.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Felis catus]
Length = 493
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 180/401 (44%), Gaps = 73/401 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 130 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 189
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 190 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 231
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ I ETG +I I + L + + + G A +I +L + +
Sbjct: 232 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLRE--AFE 287
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+LA N+HS S + P GP+ + +S P ++
Sbjct: 288 NDMLAV---NTHSGYFSSLYPPHQ---------FGPFPHH------------HSYPEQEI 323
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
+ L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 324 ------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI 371
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITE 394
++ EA + Q R K++ ++ + + VP+S G +IGKGG + E
Sbjct: 372 ---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 428
Query: 395 MRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 429 LQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 465
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 319 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 377
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 378 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 422
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 423 GKTVNELQNLTSAEVIVPRDQ 443
>gi|413944062|gb|AFW76711.1| hypothetical protein ZEAMMB73_249479 [Zea mays]
Length = 426
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
TTRLLVP S I C G+ GS+ ++++R T AN++ILP+E+LP A E DE++QI G++
Sbjct: 185 ITTRLLVPASEIACFDGREGSL-SDIQRQTSANVQILPREDLPSCALESDELIQIVGEIK 243
Query: 430 LAKDALIQVMTRLRANLF 447
A++ALIQV T+LR+ L+
Sbjct: 244 AARNALIQVTTKLRSFLY 261
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 112/241 (46%), Gaps = 40/241 (16%)
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
D + PAQ+A+ + ++ D D + +T +LLVP+ +I C G+ G + +I
Sbjct: 157 DHELFPAQEAVLHIQTHIV------DLGPDMDNIITTRLLVPASEIACFDGREGSL-SDI 209
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
+ +T A ++IL E LPSCAL SDEL+QI GE + AL Q+ ++L R +
Sbjct: 210 QRQTSANVQILPREDLPSCALESDELIQIVGEIKAARNALIQVTTKLRSFLYRE---MPD 266
Query: 226 AISNSHSSSGSLVGPTAATPIVGIAPLMG---PYGGYK-----------GDTAGDWSRSL 271
I + + + P A +P P G P G Y D+ G S S
Sbjct: 267 PIQVGNINLHGAISPVAGSP---RGPYQGNDIPMGAYHQASQLATSWHSKDSGGSASGSF 323
Query: 272 Y--SAPRDDL---SSKEF--------SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIK 318
S DD+ ++K F +L +V P + + + + G+ + QI + SGAA+
Sbjct: 324 EQGSNINDDIRQSATKRFAVPLVTRSTLEIVIPNSAVASLTMRAGSKLAQISEISGAAVT 383
Query: 319 V 319
+
Sbjct: 384 L 384
>gi|296491333|tpg|DAA33396.1| TPA: insulin-like growth factor 2 mRNA binding protein 2 isoform 2
[Bos taurus]
Length = 556
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 174/388 (44%), Gaps = 72/388 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ I ETG +I I + L + + + G A +I +L + +
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEIEIMKKLRE--AFE 350
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+LA N+HS S + P GP+ + +S P ++
Sbjct: 351 NDMLAV---NTHSGYFSSLYPPHQ---------FGPFPHH------------HSYPEQEI 386
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
+ L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 387 ------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI 434
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITE 394
++ EA + Q R K++ ++ + + VP+S G +IGKGG + E
Sbjct: 435 ---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 491
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMV 422
++ LT A + I+P++ P E++E++
Sbjct: 492 LQNLTSAEV-IVPRDQTP---DENEEVI 515
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 382 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 440
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 441 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 485
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 486 GKTVNELQNLTSAEVIVPRDQ 506
>gi|332215031|ref|XP_003256640.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Nomascus leucogenys]
Length = 556
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 174/388 (44%), Gaps = 72/388 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ I ETG +I I + L + + + G A +I +L + +
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLRE--AFE 350
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+LA N+HS S + P GP+ + +S P ++
Sbjct: 351 NDMLAV---NTHSGYFSSLYPHHQ---------FGPFPHH------------HSYPEQEI 386
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
+ L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 387 ------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI 434
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITE 394
++ EA + Q R K++ ++ + + VP+S G +IGKGG + E
Sbjct: 435 ---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 491
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMV 422
++ LT A + I+P++ P E++E++
Sbjct: 492 LQNLTSAEV-IVPRDQTP---DENEEVI 515
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 382 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 440
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 441 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 485
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 486 GKTVNELQNLTSAEVIVPRDQ 506
>gi|212275472|ref|NP_001130567.1| uncharacterized protein LOC100191666 [Zea mays]
gi|194689502|gb|ACF78835.1| unknown [Zea mays]
gi|413934214|gb|AFW68765.1| hypothetical protein ZEAMMB73_642279 [Zea mays]
Length = 580
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 95/174 (54%), Gaps = 13/174 (7%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIR-IGETVPGSEERVVTVYSASDE 98
P TV+R L P +K+G+IIG GE V++L +T++ +R IG + +E+ V+
Sbjct: 52 PGTTVFRMLIPAQKVGAIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVIIF------ 105
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
E D+ + PA DAL +V+ + I + D + + ++L PS+Q +IG+
Sbjct: 106 --GREQLDEPLPPAMDALLRVYQQTINND---SLDVGPDNVIVRRILAPSEQAASLIGEH 160
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G ++ +I + IR+L D+ LP AL D +++I G + V KAL +AS L
Sbjct: 161 GVMINSIMEASQTDIRVLDDD-LPPVALEEDRVIEIWGSPAGVYKALELVASHL 213
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 88/176 (50%), Gaps = 7/176 (3%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
R++ P +G +IG G + ++ +E+ A +++ + + + +E ++ L
Sbjct: 57 FRMLIPAQKVGAIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVIIFGREQLDEPLPP 116
Query: 346 TIEAVVRLQPRCSEKIERDSGLISFTTR-LLVPTSRIGCLIGKGGSIITEMRRLTKANIR 404
++A++R+ + D G + R +L P+ + LIG+ G +I + ++ +IR
Sbjct: 117 AMDALLRVYQQTINNDSLDVGPDNVIVRRILAPSEQAASLIGEHGVMINSIMEASQTDIR 176
Query: 405 ILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
+L ++LP +A E+D +++I G AL V + LR L DR + +P+F
Sbjct: 177 VL-DDDLPPVALEEDRVIEIWGSPAGVYKALELVASHLRKYLVDR-----SVIPLF 226
>gi|332215033|ref|XP_003256641.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Nomascus leucogenys]
gi|397470079|ref|XP_003806661.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Pan paniscus]
gi|179479950|gb|ACB86627.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 493
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 180/401 (44%), Gaps = 73/401 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 130 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 189
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 190 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 231
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ I ETG +I I + L + + + G A +I +L + +
Sbjct: 232 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLRE--AFE 287
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+LA N+HS S + P GP+ + +S P ++
Sbjct: 288 NDMLAV---NTHSGYFSSLYPHHQ---------FGPFPHH------------HSYPEQEI 323
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
+ L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 324 ------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI 371
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITE 394
++ EA + Q R K++ ++ + + VP+S G +IGKGG + E
Sbjct: 372 ---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 428
Query: 395 MRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 429 LQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 465
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 319 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 377
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 378 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 422
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 423 GKTVNELQNLTSAEVIVPRDQ 443
>gi|291400301|ref|XP_002716510.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2-like
isoform 2 [Oryctolagus cuniculus]
Length = 556
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 174/388 (44%), Gaps = 72/388 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ I ETG +I I + L + + + G A +I +L + +
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEAEIMKKLRE--AFE 350
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+LA N+HS S + P GP+ + +S P ++
Sbjct: 351 NDMLAV---NTHSGYFSSLYPHHQ---------FGPFPHH------------HSYPEQEI 386
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
+ L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 387 ------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI 434
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITE 394
++ EA + Q R K++ ++ + + VP+S G +IGKGG + E
Sbjct: 435 ---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 491
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMV 422
++ LT A + I+P++ P E++E++
Sbjct: 492 LQNLTSAEV-IVPRDQTP---DENEEVI 515
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 382 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 440
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 441 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 485
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 486 GKTVNELQNLTSAEVIVPRDQ 506
>gi|270007202|gb|EFA03650.1| hypothetical protein TcasGA2_TC013744 [Tribolium castaneum]
Length = 710
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 180/404 (44%), Gaps = 65/404 (16%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE-T 99
D R L +G+IIGR G ++Q+ T++++ + + GS E+ +T+Y + T
Sbjct: 287 DFPLRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDNVGSLEKAITIYGNPENCT 346
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
NA + I E ++ + ++ ++ K+L ++ IG +IGKGG
Sbjct: 347 NAC-------------------KRILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKGG 387
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
++ I ET +I + + S L + ++ + G + +A QI+++L ++N
Sbjct: 388 NTIKRIMQETDTKITVSSINDINSFNL--ERIITVKGAIDNMSRAEAQISAKLRQSYEND 445
Query: 217 SRS---QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
++ Q ++ + + + +G + G AP G Y GD + Y
Sbjct: 446 LQAMAPQTMMFPGLHPMAMMATAGIGYGSRGLYTGQAPYPGMYPAGAAQGGGDSQETTY- 504
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV---DSSSTEGDDCL 330
L P +G +IG G+ I I + SGA++K+ D + +
Sbjct: 505 --------------LYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQ----- 545
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCL 384
++ T+ + EA + Q EK+ R+ G ++ T ++VP+S++G +
Sbjct: 546 ---ETQNERRVTIVGSPEAQWKAQYLIFEKM-REEGFVAGSDDVRLTVEIMVPSSQVGRI 601
Query: 385 IGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL 428
IGKGG + E++R+T + I++ + P+ ED+ V I G
Sbjct: 602 IGKGGQNVRELQRVTGSVIKLPEQGASPQ---EDETTVHIIGPF 642
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 26/142 (18%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVP--GSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I ET P ER VT+
Sbjct: 500 QETTYLYI-PNNAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQETQNERRVTIVG- 557
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV--TAKLLVPSDQIGC 153
SP +A +K +I E++R + G V T +++VPS Q+G
Sbjct: 558 --------------SP--EAQWKAQ-YLIFEKMREEGFVAGSDDVRLTVEIMVPSSQVGR 600
Query: 154 VIGKGGQIVQNIRSETGAQIRI 175
+IGKGGQ V+ ++ TG+ I++
Sbjct: 601 IIGKGGQNVRELQRVTGSVIKL 622
>gi|345796407|ref|XP_003434167.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2
isoform 1 [Canis lupus familiaris]
Length = 488
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 180/401 (44%), Gaps = 73/401 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 125 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 184
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 185 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 226
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ I ETG +I I + L + + + G A +I +L + +
Sbjct: 227 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLRE--AFE 282
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+LA N+HS S + P GP+ + +S P ++
Sbjct: 283 NDMLAV---NTHSGYFSSLYPPHQ---------FGPFPHH------------HSYPEQEI 318
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
+ L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 319 ------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI 366
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITE 394
++ EA + Q R K++ ++ + + VP+S G +IGKGG + E
Sbjct: 367 ---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 423
Query: 395 MRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 424 LQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 460
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 314 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 372
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 373 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 417
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 418 GKTVNELQNLTSAEVIVPRDQ 438
>gi|56118219|ref|NP_001007226.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform b [Homo
sapiens]
gi|4883681|gb|AAD31596.1|AF057352_1 hepatocellular carcinoma autoantigen [Homo sapiens]
gi|119598615|gb|EAW78209.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_a
[Homo sapiens]
gi|410223072|gb|JAA08755.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410251294|gb|JAA13614.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410302888|gb|JAA30044.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410342485|gb|JAA40189.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
Length = 556
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 174/388 (44%), Gaps = 72/388 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ I ETG +I I + L + + + G A +I +L + +
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLRE--AFE 350
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+LA N+HS S + P GP+ + +S P ++
Sbjct: 351 NDMLAV---NTHSGYFSSLYPHHQ---------FGPFPHH------------HSYPEQEI 386
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
+ L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 387 ------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI 434
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITE 394
++ EA + Q R K++ ++ + + VP+S G +IGKGG + E
Sbjct: 435 ---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 491
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMV 422
++ LT A + I+P++ P E++E++
Sbjct: 492 LQNLTSAEV-IVPRDQTP---DENEEVI 515
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 382 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 440
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 441 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 485
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 486 GKTVNELQNLTSAEVIVPRDQ 506
>gi|197101075|ref|NP_001125573.1| insulin-like growth factor 2 mRNA-binding protein 2 [Pongo abelii]
gi|75041981|sp|Q5RB68.1|IF2B2_PONAB RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|55728499|emb|CAH90992.1| hypothetical protein [Pongo abelii]
Length = 556
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 174/388 (44%), Gaps = 72/388 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ I ETG +I I + L + + + G A +I +L + +
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLRE--AFE 350
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+LA N+HS S + P GP+ + +S P ++
Sbjct: 351 NDMLAV---NTHSGYFSSLYPHHQ---------FGPFPHH------------HSYPEQEI 386
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
+ L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 387 ------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI 434
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITE 394
++ EA + Q R K++ ++ + + VP+S G +IGKGG + E
Sbjct: 435 ---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 491
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMV 422
++ LT A + I+P++ P E++E++
Sbjct: 492 LQNLTSAEV-IVPRDQTP---DENEEVI 515
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 382 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 440
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 441 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 485
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 486 GKTVNELQNLTSAEVIVPRDQ 506
>gi|242039711|ref|XP_002467250.1| hypothetical protein SORBIDRAFT_01g022040 [Sorghum bicolor]
gi|241921104|gb|EER94248.1| hypothetical protein SORBIDRAFT_01g022040 [Sorghum bicolor]
Length = 588
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 97/174 (55%), Gaps = 13/174 (7%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIR-IGETVPGSEERVVTVYSASDE 98
P +V+R L P +K+G IIG GE V++L +T++ +R IG + +E+ V+
Sbjct: 52 PGTSVFRMLIPAQKVGVIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVIIF------ 105
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
E ++ + PA DAL +V+ + I +E D SDG + ++LVPS+Q +IG+
Sbjct: 106 --GREQPEEPLPPAMDALLRVYQQTINDE-SLDVGSDG--VIVRRILVPSEQAESLIGEH 160
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G ++ +I + IR+L D LP AL D +V+I G + V KAL +AS L
Sbjct: 161 GVMINSIMEASQTDIRVL-DGDLPPVALEEDRVVEIWGLPARVHKALELVASHL 213
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 87/176 (49%), Gaps = 7/176 (3%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
R++ P +G +IG G + ++ +E+ A +++ + + + +E E+ L
Sbjct: 57 FRMLIPAQKVGVIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVIIFGREQPEEPLPP 116
Query: 346 TIEAVVRLQPRCSEKIERDSGLIS-FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIR 404
++A++R+ + D G R+LVP+ + LIG+ G +I + ++ +IR
Sbjct: 117 AMDALLRVYQQTINDESLDVGSDGVIVRRILVPSEQAESLIGEHGVMINSIMEASQTDIR 176
Query: 405 ILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
+L +LP +A E+D +V+I G AL V + LR L DR + +P+F
Sbjct: 177 VL-DGDLPPVALEEDRVVEIWGLPARVHKALELVASHLRKYLVDR-----SVIPLF 226
>gi|332025247|gb|EGI65421.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Acromyrmex
echinatior]
Length = 568
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 186/402 (46%), Gaps = 54/402 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE-T 99
D R L +G+IIGR G ++Q+ T++++ + + GS E+ +T+Y + T
Sbjct: 120 DFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNVGSLEKAITIYGNPENCT 179
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
NA + I E ++ + ++ ++T K+L ++ IG +IGKGG
Sbjct: 180 NACKK-------------------ILEVMQQEANNTNKGEITLKILAHNNLIGRIIGKGG 220
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
++ I +T +I + + S L + ++ + G + KA I+S+L ++N
Sbjct: 221 NTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGSIDNMSKAESMISSKLRQSYEND 278
Query: 217 SRS---QHLLASAISNSHSSSGSLVGPTAATP-IVGIAPLMGPYGGYKGDTAGDWSRSLY 272
++ Q ++ + S + +G ++ P + G P PY G
Sbjct: 279 LQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQSSLPTQQG------- 331
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P D F L P ++G +IG G+ I I + SGA++K+ + E D
Sbjct: 332 -VPASDTQETTF---LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKI--APLEQDKPAEQ 385
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCLIG 386
+ ++ T+ + E+ + Q EK+ R+ G ++ T +LVP++++G +IG
Sbjct: 386 QTERKV---TIVGSPESQWKAQYLIFEKM-REEGYVAGTEDVRLTIEILVPSTQVGRIIG 441
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL 428
KGG + E++R+T + I++ ++ P ++E++ V I G
Sbjct: 442 KGGQNVRELQRVTGSVIKLSEQQATPP-SAEEETTVHIIGPF 482
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 76/151 (50%), Gaps = 24/151 (15%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSE--ERVVTVYSA 95
++T + Y+ P +G+IIG G ++ + + + ++I + P + ER VT+ +
Sbjct: 338 QETTFLYI-PNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGS 396
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAE-ELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E + G ED ++T ++LVPS Q+G +
Sbjct: 397 PES-------------QWKAQYLIFEKMREEGYVAGTEDV----RLTIEILVPSTQVGRI 439
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
IGKGGQ V+ ++ TG+ I++ + + P A
Sbjct: 440 IGKGGQNVRELQRVTGSVIKLSEQQATPPSA 470
>gi|118086587|ref|XP_419049.2| PREDICTED: poly(rC)-binding protein 3 [Gallus gallus]
Length = 448
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 144/327 (44%), Gaps = 82/327 (25%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R ++ ++I I E GS ER+VT+ +D
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GSCPERIVTITGPTD------- 69
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---------VTAKLLVPSDQIGCVI 155
A+FK + L+ +ED + VT +L+VP+ Q G +I
Sbjct: 70 ----------AIFKAFSMI---ALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLI 116
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG ++ IR TGAQ+++ D LP+ R+ V ISG + + + QI + ++
Sbjct: 117 GKGGSKIKEIRESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLES 172
Query: 216 PS-----------------------RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
P R+ +LASA +H+ L P A +
Sbjct: 173 PPKGATIPYRPKPASAPIIFAGGQVRADTILASA--GNHT---VLAQPQPAPAFT----I 223
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRD------------DLSSKEFSLRLVCPVANIGGVIG 300
G Y D ++ P D +S S L P IG +IG
Sbjct: 224 QGQYAIPHPDLTKLHQLAMQHPPFTPLGQTTPGFPGLDATSPTSSHELTIPNDLIGCIIG 283
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGD 327
+ G+ IN+IRQ SGA IK+ +++TEG
Sbjct: 284 RQGSKINEIRQMSGAQIKI-ANATEGS 309
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 32/170 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS--------TEGDDCLITVSS 335
++RL+ +G +IGK G + ++R+ESGA I + S T D + S
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFKAFS 76
Query: 336 K---EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+F ED ++ + V +P T RL+VP S+ G LIGKGGS I
Sbjct: 77 MIALKFEEDINASMTNSTVTSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 123
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
E+R T A +++ + LP + + V ISG DA+IQ + ++
Sbjct: 124 KEIRESTGAQVQVA-GDMLP---NSTERAVTISGT----PDAIIQCVKQI 165
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + SC R +
Sbjct: 9 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----SCPER---I 61
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + ++++NS +S V
Sbjct: 62 VTITGPTDAIFKAFSMIALKFEED-------INASMTNSTVTSKPPV------------- 101
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 102 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 128
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 129 STGAQVQV 136
>gi|109042331|ref|XP_001095005.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Macaca mulatta]
gi|402860701|ref|XP_003894761.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Papio anubis]
Length = 556
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 174/388 (44%), Gaps = 72/388 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ I ETG +I I + L + + + G A +I +L + +
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLRE--AFE 350
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+LA N+HS S + P GP+ + +S P ++
Sbjct: 351 NDMLAV---NTHSGYFSSLYPHHQ---------FGPFPHH------------HSYPEQEV 386
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
+ L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 387 ------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI 434
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITE 394
++ EA + Q R K++ ++ + + VP+S G +IGKGG + E
Sbjct: 435 ---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 491
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMV 422
++ LT A + I+P++ P E++E++
Sbjct: 492 LQNLTSAEV-IVPRDQTP---DENEEVI 515
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE V P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 382 PEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 440
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 441 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 485
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 486 GKTVNELQNLTSAEVIVPRDQ 506
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 41/199 (20%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS---STEGDDCLITVSSKE 337
++E L+++ +G +IGK G + +I E+G I + S S + ITV
Sbjct: 272 AEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKG-- 329
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERD-------SGLISF-------------------- 370
T+ A A + + + E E D SG S
Sbjct: 330 ----TVEACASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQE 385
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
L +PT +G +IGK G+ I ++ R A+I+I P E P ++ + MV I+G +
Sbjct: 386 VVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG-PDVS---ERMVIITGPPEA 441
Query: 431 AKDALIQVMTRLR-ANLFD 448
A ++ +L+ N F+
Sbjct: 442 QFKAQGRIFGKLKEENFFN 460
>gi|410982764|ref|XP_003997718.1| PREDICTED: RNA-binding protein Nova-2 [Felis catus]
Length = 372
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 144/305 (47%), Gaps = 32/305 (10%)
Query: 32 DRDQFIIGPEDTVY-RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEE 87
DRD G E + + L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ E
Sbjct: 33 DRD----GEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTE 88
Query: 88 RVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLV 146
RV V ++ NA F++ + + + + L+ + AKL+V
Sbjct: 89 RVCLVQGTAEALNAVHS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIV 145
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALC 206
P+ G +IGKGG V+ + ++GA +++ + P + +V +SGE V KA+
Sbjct: 146 PNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVS 202
Query: 207 QIASRLHDNPSRSQHL------LASAISNSHSSSGSLVGPTAATPIVGIAP------LMG 254
I ++ ++P S L +A ++NS+ + P P A L+G
Sbjct: 203 AIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASGLLG 262
Query: 255 PYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
P G G G + +L + DL +KE + + P +G ++GKGG + + ++ +G
Sbjct: 263 P-AGLAG--VGAFPAALPAFSGTDL-AKEL-VEIAVPENLVGAILGKGGKTLVEYQELTG 317
Query: 315 AAIKV 319
A I++
Sbjct: 318 ARIQI 322
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 40 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 99
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 100 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 157
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 158 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 209
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 91/224 (40%), Gaps = 52/224 (23%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
D D + G K+L+PS G +IGKGGQ + ++ ETGA I++ K +
Sbjct: 33 DRDGEEGEYFL-KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 91
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
LVQ G A + IA ++ + P Q + + N
Sbjct: 92 LVQ--GTAEALNAVHSFIAEKVREIP---QAMTKPEVVN--------------------- 125
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
++ P D A +L+ P + G +IGKGGA + +
Sbjct: 126 -ILQPQTTMNPDRAKQ-------------------AKLIVPNSTAGLIIGKGGATVKAVM 165
Query: 311 QESGAAIKVDSSSTEG---DDCLITVSSK-EFFEDTLSATIEAV 350
++SGA +++ S EG + ++TVS + E +SA ++ V
Sbjct: 166 EQSGAWVQL-SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKV 208
>gi|326917277|ref|XP_003204927.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 448
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 144/327 (44%), Gaps = 82/327 (25%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R ++ ++I I E GS ER+VT+ +D
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GSCPERIVTITGPTD------- 69
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---------VTAKLLVPSDQIGCVI 155
A+FK + L+ +ED + VT +L+VP+ Q G +I
Sbjct: 70 ----------AIFKAFSMI---ALKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLI 116
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG ++ IR TGAQ+++ D LP+ R+ V ISG + + + QI + ++
Sbjct: 117 GKGGSKIKEIRESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLES 172
Query: 216 PS-----------------------RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
P R+ +LASA +H+ L P A +
Sbjct: 173 PPKGATIPYRPKPASAPIIFAGGQVRADTILASA--GNHT---VLAQPQPAPAFT----I 223
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRD------------DLSSKEFSLRLVCPVANIGGVIG 300
G Y D ++ P D +S S L P IG +IG
Sbjct: 224 QGQYAIPHPDLTKLHQLAMQHPPFTPLGQTTPGFPGLDATSPTSSHELTIPNDLIGCIIG 283
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGD 327
+ G+ IN+IRQ SGA IK+ +++TEG
Sbjct: 284 RQGSKINEIRQMSGAQIKI-ANATEGS 309
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 22/165 (13%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + S IT + F+
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFK--- 73
Query: 344 SATIEAVVRLQPRCSEKIE---RDSGLIS---FTTRLLVPTSRIGCLIGKGGSIITEMRR 397
A + + E I +S + S T RL+VP S+ G LIGKGGS I E+R
Sbjct: 74 -----AFSMIALKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 128
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
T A +++ + LP + + V ISG DA+IQ + ++
Sbjct: 129 STGAQVQVA-GDMLP---NSTERAVTISGT----PDAIIQCVKQI 165
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + SC R +
Sbjct: 9 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----SCPER---I 61
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + ++++NS
Sbjct: 62 VTITGPTDAIFKAFSMIALKFEED-------INASMTNS--------------------- 93
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
S+ S P +LRLV P + G +IGKGG+ I +IR+
Sbjct: 94 ------------------SVTSKP-------PVTLRLVVPASQCGSLIGKGGSKIKEIRE 128
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 129 STGAQVQV 136
>gi|193248243|dbj|BAC04327.2| unnamed protein product [Homo sapiens]
Length = 319
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 139/295 (47%), Gaps = 38/295 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 179
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
+ + A + + ++ P T + +A P+ G T +
Sbjct: 180 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPL-GQTNPAF------ 232
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
P D S + L P IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 233 -PGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-ANATEGSS 285
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 56/216 (25%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET----- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 101 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVK 160
Query: 100 --------------------------------NAFEDGDKFVSPAQDALFKVHDRVIAEE 127
A+ ++ P D L K+H + +
Sbjct: 161 QICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQT 220
Query: 128 -----------LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
G + S T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 221 PFPPLGQTNPAFPGLDASPPAS--THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 278
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+ S+ + I+G + + A I +RL
Sbjct: 279 N-----ATEGSSERQITITGTPANISLAQYLINARL 309
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 62 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 122 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 173
Query: 452 AVSTFVP 458
A + P
Sbjct: 174 ATIPYRP 180
>gi|348519759|ref|XP_003447397.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Oreochromis niloticus]
Length = 581
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 183/409 (44%), Gaps = 71/409 (17%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+SK+ I + G+ E+ +T++S + +
Sbjct: 198 DFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPITIHSTPEGCS 257
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A A + + + A E + ED + K+L + +G +IGK G+
Sbjct: 258 A----------ACRMILDIMQKE-ANETKTTED------IPLKILAHNSLVGRLIGKEGR 300
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPS 217
++ I +TG +I I + L + + + G KA +I +L ++N
Sbjct: 301 NLKKIEEDTGTKITISSLQDL--TIYNPERTITVKGSIDACCKAEVEITKKLREAYENDI 358
Query: 218 RSQHLLASAISNSH------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
+ + A+ I + SSG V P AA P + P + P
Sbjct: 359 AAINQQANLIPGLNLNALGIFSSGLPVLPPAAGPRSAV-PAVAPQ--------------- 402
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
AP ++ + L P +G +IGK G I Q+ +GA+IK+ + E D
Sbjct: 403 -QAPEQEV------VYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKI--APAESPD--- 450
Query: 332 TVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIG 386
V+ + ++ T EA + Q R K++ ++ + T + VP+S G +IG
Sbjct: 451 -VTERMVI---ITGTPEAQFKAQGRIFGKLKEENFFSAKEEVKLETHIKVPSSAAGRVIG 506
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEM-VQISGDLDLAKDA 434
KGG + E++ LT A + I+P++ P E+DE+ V+ISG ++ A
Sbjct: 507 KGGKTVNELQNLTSAEV-IVPRDQTP---DENDEVFVKISGHFFASQTA 551
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 23/197 (11%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSASD 97
PE V P + +G++IG+ G+ +KQL + I+I P ER+V + + +
Sbjct: 404 APEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVII-TGTP 462
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
E G F ++ F + V ++ + VPS G VIGK
Sbjct: 463 EAQFKAQGRIFGKLKEENFFSAKEEV---------------KLETHIKVPSSAAGRVIGK 507
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKALCQIASRLHDNP 216
GG+ V +++ T A++ + +D+ +DE V+ISG + A +I +
Sbjct: 508 GGKTVNELQNLTSAEVIVPRDQ----TPDENDEVFVKISGHFFASQTAQRKIREIIQQVK 563
Query: 217 SRSQ-HLLASAISNSHS 232
+ Q H +A+S HS
Sbjct: 564 QQEQKHQQGAAVSPHHS 580
>gi|291414465|ref|XP_002723480.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 319
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 144/294 (48%), Gaps = 36/294 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I+ + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIISS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL--- 222
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 179
Query: 223 -------LASAISNSHSSSGSLVGPTA-ATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
+ A +++ G P T + +A P+ G T + L ++
Sbjct: 180 PKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPL-GQTNPAFPAGLDAS 238
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
P S+ E ++ P IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 239 P--PASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKI-ANATEGSS 285
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + S++SNS ++S V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-------IISSMSNSPATSKPPV------------- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 34/188 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +S+ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIISSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--E 450
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 172
Query: 451 GAVSTFVP 458
GA + P
Sbjct: 173 GATIPYRP 180
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 87/214 (40%), Gaps = 52/214 (24%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEER---------------- 88
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER
Sbjct: 101 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVK 160
Query: 89 -VVTVYSASDETNA--------------FEDGDKFVSPAQDA-----LFKVHDRVIAEEL 128
+ V S A F G + Q A L K+H + +
Sbjct: 161 QICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTP 220
Query: 129 -----RGDEDSDGGHQV-----TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD 178
+ + G T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 221 FPPLGQTNPAFPAGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN- 279
Query: 179 EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+ S+ + I+G + + A I +RL
Sbjct: 280 ----ATEGSSERQITITGTPANISLAQYLINARL 309
>gi|449493846|ref|XP_002188887.2| PREDICTED: poly(rC)-binding protein 3-like [Taeniopygia guttata]
Length = 352
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 140/322 (43%), Gaps = 72/322 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R ++ ++I I E T P ER+VT+ +D
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEGTCP---ERIVTITGPTD------- 69
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---------VTAKLLVPSDQIGCVI 155
A+FK + L+ +ED + VT +L+VP+ Q G +I
Sbjct: 70 ----------AIFKAFSMI---ALKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLI 116
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG ++ IR TGAQ+++ D LP+ R+ V ISG + + + QI + ++
Sbjct: 117 GKGGSKIKEIRESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLES 172
Query: 216 PSRSQ------------------HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG 257
P + + A I S + L P A + G Y
Sbjct: 173 PPKGATIPYRPKPASAPIIFAGGQVRADTILASAGNHTVLAQPQPAPAFT----IQGQYA 228
Query: 258 GYKGDTAGDWSRSLYSAPRD------------DLSSKEFSLRLVCPVANIGGVIGKGGAI 305
D ++ P D ++ S L P IG +IG+ G+
Sbjct: 229 IPHPDLTKLHQLAMQHPPFTPLGQTTPGFPGLDATTPTSSHELTIPNDLIGCIIGRQGSK 288
Query: 306 INQIRQESGAAIKVDSSSTEGD 327
IN+IRQ SGA IK+ +++TEG
Sbjct: 289 INEIRQMSGAQIKI-ANATEGS 309
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 24/183 (13%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + + IT + F+
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGTCPERIVTITGPTDAIFK--- 73
Query: 344 SATIEAVVRLQPRCSEKIE---RDSGLIS---FTTRLLVPTSRIGCLIGKGGSIITEMRR 397
A + + E I +S + S T RL+VP S+ G LIGKGGS I E+R
Sbjct: 74 -----AFSMIALKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 128
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVST 455
T A +++ + LP + + V ISG DA+IQ + ++ + + +GA
Sbjct: 129 STGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIP 180
Query: 456 FVP 458
+ P
Sbjct: 181 YRP 183
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 9 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----TCPER---I 61
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + ++++NS
Sbjct: 62 VTITGPTDAIFKAFSMIALKFEED-------INASMTNS--------------------- 93
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
S+ S P +LRLV P + G +IGKGG+ I +IR+
Sbjct: 94 ------------------SVTSKP-------PVTLRLVVPASQCGSLIGKGGSKIKEIRE 128
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 129 STGAQVQV 136
>gi|58865460|ref|NP_001011945.1| poly(rC)-binding protein 3 [Rattus norvegicus]
gi|50927011|gb|AAH79196.1| Poly(rC) binding protein 3 [Rattus norvegicus]
Length = 319
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 139/295 (47%), Gaps = 38/295 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 179
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
+ + A + + ++ P T + +A P+ G T +
Sbjct: 180 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPL-GQTNPAF------ 232
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
P D S + L P IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 233 -PGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-ANATEGSS 285
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 56/216 (25%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET----- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 101 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVK 160
Query: 100 --------------------------------NAFEDGDKFVSPAQDALFKVHDRVIAEE 127
A+ ++ P D L K+H + +
Sbjct: 161 QICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQT 220
Query: 128 -----------LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
G + S T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 221 PFPPLGQTNPAFPGLDASPPAS--THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 278
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+ S+ + I+G + + A I +RL
Sbjct: 279 N-----ATEGSSERQITITGTPANISLAQYLINARL 309
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 62 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 122 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 173
Query: 452 AVSTFVP 458
A + P
Sbjct: 174 ATIPYRP 180
>gi|114684793|ref|XP_001157578.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan troglodytes]
gi|397506694|ref|XP_003823856.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan paniscus]
gi|426393343|ref|XP_004062984.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 351
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 139/295 (47%), Gaps = 38/295 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 211
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
+ + A + + ++ P T + +A P+ G T +
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPL-GQTNPAF------ 264
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
P D S + L P IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 265 -PGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-ANATEGSS 317
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 56/216 (25%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET----- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 133 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVK 192
Query: 100 --------------------------------NAFEDGDKFVSPAQDALFKVHDRVIAEE 127
A+ ++ P D L K+H + +
Sbjct: 193 QICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQT 252
Query: 128 -----------LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
G + S T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 253 PFPPLGQTNPAFPGLDASPPAS--THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 310
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+ S+ + I+G + + A I +RL
Sbjct: 311 N-----ATEGSSERQITITGTPANISLAQYLINARL 341
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 452 AVSTFVP 458
A + P
Sbjct: 206 ATIPYRP 212
>gi|74215286|dbj|BAE41861.1| unnamed protein product [Mus musculus]
Length = 530
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 187/412 (45%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 124 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 183
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D +V K+L + +G +IGK G
Sbjct: 184 -------------EAC-----RMILEIMQKEADETKLAEEVPLKILAHNGFVGRLIGKEG 225
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 226 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVRGTIEACANAEIEIMKKLREAFEND 283
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A V +P P+ + G + +
Sbjct: 284 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPPSPPYHPFATHSGYFSSLYPH 343
Query: 270 SLYSAPRDDLSSKEF-SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ S E ++ L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 344 HHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 401
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 402 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 454
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 455 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 502
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 356 PEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 414
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 415 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 459
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 460 GKTVNELQNLTSAEVIVPRDQ 480
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T L +PT +G +IGK G+ I ++ R A+I+I P E P ++ + MV I+G +
Sbjct: 360 TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG-PDVS---ERMVIITGPPEA 415
Query: 431 AKDALIQVMTRLR-ANLFD 448
A ++ +L+ N F+
Sbjct: 416 QFKAQGRIFGKLKEENFFN 434
>gi|354484184|ref|XP_003504270.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Cricetulus griseus]
gi|344239809|gb|EGV95912.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Cricetulus
griseus]
Length = 530
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 185/412 (44%), Gaps = 53/412 (12%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
DH ++ ++G I D R L P + +G+IIG+ G +K + T+S++ I
Sbjct: 105 DHSSREQGHSGSSSQTRQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIH 161
Query: 80 -ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGG 137
+ G+ E+ VT+++ + T+ +A R+I E ++ + ED+
Sbjct: 162 RKENSGAAEKPVTIHATPEGTS-------------EAC-----RMILEIMQKEAEDTKLA 203
Query: 138 HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGE 197
+V K+L + +G +IGK G+ ++ I ETG +I I + L + + + G
Sbjct: 204 EEVPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGT 261
Query: 198 ASVVKKALCQIASRLHD---NPSRSQHLLASAISNSH------SSSGSLVGPTAATPIVG 248
A +I +L + N + + A+ I + S+G V P A P G
Sbjct: 262 IDACANAEMEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGP-RG 320
Query: 249 IAPLM--GPYGGYKGDTAGDWSRSLYSAPRDDLSSKEF-SLRLVCPVANIGGVIGKGGAI 305
+ P + P+ + G + + S E ++ L P +G +IGK GA
Sbjct: 321 VPPSVPYHPFASHSGYFPNMYPHHHFGPFPHHHSYPEQETVNLFIPTQAVGAIIGKKGAH 380
Query: 306 INQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDS 365
I Q+ + +GA+IK+ + EG D VS + ++ EA + Q R K++ ++
Sbjct: 381 IKQLARFAGASIKI--APAEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEEN 431
Query: 366 GL-----ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLP 412
+ + VP+S G +IGKGG + E++ LT A + I+P++ P
Sbjct: 432 FFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP 482
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T L +PT +G +IGK G+ I ++ R A+I+I P E P ++ + MV I+G +
Sbjct: 360 TVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG-PDVS---ERMVIITGPPEA 415
Query: 431 AKDALIQVMTRLR-ANLFD 448
A ++ +L+ N F+
Sbjct: 416 QFKAQGRIFGKLKEENFFN 434
>gi|148665204|gb|EDK97620.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_a
[Mus musculus]
Length = 596
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 181/399 (45%), Gaps = 51/399 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 190 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 249
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D +V K+L + +G +IGK G
Sbjct: 250 -------------EAC-----RMILEIMQKEADETKLAEEVPLKILAHNGFVGRLIGKEG 291
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 292 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVRGTIEACANAEIEIMKKLREAFEND 349
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A V +P P+ + G + +
Sbjct: 350 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPPSPPYHPFATHSGYFSSLYPH 409
Query: 270 SLYSAPRDDLSSKEF-SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ S E ++ L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 410 HHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 467
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 468 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 520
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 521 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 555
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 422 PEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 480
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 481 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 525
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 526 GKTVNELQNLTSAEVIVPRDQ 546
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T L +PT +G +IGK G+ I ++ R A+I+I P E P ++ + MV I+G +
Sbjct: 426 TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG-PDVS---ERMVIITGPPEA 481
Query: 431 AKDALIQVMTRLR-ANLFD 448
A ++ +L+ N F+
Sbjct: 482 QFKAQGRIFGKLKEENFFN 500
>gi|403297205|ref|XP_003939469.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 351
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 139/295 (47%), Gaps = 38/295 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 211
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
+ + A + + ++ P T + +A P+ G T +
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPL-GQTNPAF------ 264
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
P D S + L P IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 265 -PGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-ANATEGSS 317
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 56/216 (25%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET----- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 133 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVK 192
Query: 100 --------------------------------NAFEDGDKFVSPAQDALFKVHDRVIAE- 126
A+ ++ P D L K+H + +
Sbjct: 193 QICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQT 252
Query: 127 ----------ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
G + S T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 253 PFPPLGQTNPAFPGLDASPPAS--THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 310
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+ S+ + I+G + + A I +RL
Sbjct: 311 N-----ATEGSSERQITITGTPANISLAQYLINARL 341
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 452 AVSTFVP 458
A + P
Sbjct: 206 ATIPYRP 212
>gi|426218397|ref|XP_004003433.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Ovis aries]
Length = 319
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 136/296 (45%), Gaps = 40/296 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + ++ +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPRKGVTVVVA 179
Query: 226 AISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD-------- 277
S+ G A T + G Y D ++ P
Sbjct: 180 --PKPASTPVIFAGGQAYT-------IQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPA 230
Query: 278 -----DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
D S + L P IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 231 FPAGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-ANATEGSS 285
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 34/188 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD--RE 450
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + R+
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPRK 172
Query: 451 GAVSTFVP 458
G P
Sbjct: 173 GVTVVVAP 180
>gi|322792902|gb|EFZ16735.1| hypothetical protein SINV_14612 [Solenopsis invicta]
Length = 555
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 193/422 (45%), Gaps = 58/422 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE-T 99
D R L +G+IIGR G ++Q+ T++++ + + GS E+ +T+Y + T
Sbjct: 111 DFPLRILVQSDMVGAIIGRQGTTIRQITQLTRARVDVHRKDNVGSLEKAITIYGNPENCT 170
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
NA + I E ++ + ++ ++T K+L ++ IG +IGKGG
Sbjct: 171 NACKK-------------------ILEVMQQEANNTNKGEITLKILAHNNLIGRIIGKGG 211
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
++ I +T +I + + S L + ++ + G + KA I+S+L ++N
Sbjct: 212 NTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGSIDNMSKAESMISSKLRQSYEND 269
Query: 217 SRS---QHLLASAISNSHSSSGSLVGPTAATP-IVGIAPLMGPYGGYKGDTAGDWSRSLY 272
++ Q ++ + S + +G ++ P + G P PY G
Sbjct: 270 LQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQSSLPTQQG------- 322
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P D F L P ++G +IG G+ I I + SGA++K+ + E D
Sbjct: 323 -VPASDTQETTF---LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKI--APLEQDKPAEQ 376
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCLIG 386
+ ++ T+ + E+ + Q EK+ R+ G ++ T +LVP++++G +IG
Sbjct: 377 QTERKV---TIVGSPESQWKAQYLIFEKM-REEGYVAGTEDVRLTIEILVPSTQVGRIIG 432
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
KGG + E++R+T + I++ ++ P ++E++ V I G + A R+RA +
Sbjct: 433 KGGQNVRELQRVTGSVIKLSEQQATPP-SAEEETTVHIIGPFFSVQSA----QRRIRAMV 487
Query: 447 FD 448
Sbjct: 488 LQ 489
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 76/151 (50%), Gaps = 24/151 (15%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSE--ERVVTVYSA 95
++T + Y+ P +G+IIG G ++ + + + ++I + P + ER VT+ +
Sbjct: 329 QETTFLYI-PNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGS 387
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAE-ELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E + G ED ++T ++LVPS Q+G +
Sbjct: 388 PES-------------QWKAQYLIFEKMREEGYVAGTEDV----RLTIEILVPSTQVGRI 430
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
IGKGGQ V+ ++ TG+ I++ + + P A
Sbjct: 431 IGKGGQNVRELQRVTGSVIKLSEQQATPPSA 461
>gi|395536911|ref|XP_003770452.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Sarcophilus
harrisii]
Length = 318
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 139/294 (47%), Gaps = 37/294 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL--- 222
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 179
Query: 223 -------LASAISNSHSSSGSLVGPTA-ATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
+ A +++ G P T + +A P+ ++ +
Sbjct: 180 PKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFP--------PLGQTTPAF 231
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
P D S + L P IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 232 PGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-ANATEGSS 284
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + +++SNS ++S V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-------IINSMSNSTATSKPPV------------- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 34/188 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSTATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--E 450
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 172
Query: 451 GAVSTFVP 458
GA + P
Sbjct: 173 GATIPYRP 180
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 57/216 (26%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET----- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 101 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVK 160
Query: 100 --------------------------------NAFEDGDKFVSPAQDALFKVHDRVIAEE 127
A+ ++ P D L K+H + +
Sbjct: 161 QICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPD-LTKLHQLAMQQT 219
Query: 128 -----------LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
G + S T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 220 PFPPLGQTTPAFPGLDASPPAS--THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 277
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+ S+ + I+G + + A I +RL
Sbjct: 278 N-----ATEGSSERQITITGTPANISLAQYLINARL 308
>gi|148665206|gb|EDK97622.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_c
[Mus musculus]
Length = 543
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 188/412 (45%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 137 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 196
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + +V K+L + +G +IGK G
Sbjct: 197 -------------EAC-----RMILEIMQKEADETKLAEEVPLKILAHNGFVGRLIGKEG 238
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 239 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVRGTIEACANAEIEIMKKLREAFEND 296
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A V +P P+ + G + +
Sbjct: 297 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPPSPPYHPFATHSGYFSSLYPH 356
Query: 270 SLYSAPRDDLSSKEF-SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ S E ++ L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 357 HHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 414
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 415 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 467
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 468 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 515
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 369 PEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 427
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 428 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 472
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 473 GKTVNELQNLTSAEVIVPRDQ 493
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T L +PT +G +IGK G+ I ++ R A+I+I P E P ++ + MV I+G +
Sbjct: 373 TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG-PDVS---ERMVIITGPPEA 428
Query: 431 AKDALIQVMTRLR-ANLFD 448
A ++ +L+ N F+
Sbjct: 429 QFKAQGRIFGKLKEENFFN 447
>gi|145207996|ref|NP_898850.2| insulin-like growth factor 2 mRNA-binding protein 2 [Mus musculus]
gi|81889459|sp|Q5SF07.1|IF2B2_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|46577878|gb|AAT01428.1| insulin-like growth factor 2 mRNA-binding protein 2 [Mus musculus]
Length = 592
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 181/399 (45%), Gaps = 51/399 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 186 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 245
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D +V K+L + +G +IGK G
Sbjct: 246 -------------EAC-----RMILEIMQKEADETKLAEEVPLKILAHNGFVGRLIGKEG 287
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 288 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVRGTIEACANAEIEIMKKLREAFEND 345
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A V +P P+ + G + +
Sbjct: 346 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPPSPPYHPFATHSGYFSSLYPH 405
Query: 270 SLYSAPRDDLSSKEF-SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ S E ++ L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 406 HHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 463
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 464 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 516
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 517 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 551
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 418 PEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 476
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 477 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 521
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 522 GKTVNELQNLTSAEVIVPRDQ 542
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T L +PT +G +IGK G+ I ++ R A+I+I P E P ++ + MV I+G +
Sbjct: 422 TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG-PDVS---ERMVIITGPPEA 477
Query: 431 AKDALIQVMTRLR-ANLFD 448
A ++ +L+ N F+
Sbjct: 478 QFKAQGRIFGKLKEENFFN 496
>gi|348522861|ref|XP_003448942.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Oreochromis niloticus]
Length = 588
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 189/420 (45%), Gaps = 68/420 (16%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T SKI I + G+ E+ +T++S D +
Sbjct: 194 DIPLRMLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITIHSTPDGCS 253
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
+A + D + E L D+ ++ K+L + +G +IGK G+
Sbjct: 254 -------------NACKTIMDIMQKEAL----DTKFTEEIPLKILAHNSFVGRLIGKEGR 296
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
++ I ETG +I I L+D L + + + G KA ++ ++ +++
Sbjct: 297 NLKKIEQETGTKITISPLQDLTL----YNPERTITVKGSIEACAKAEEEVMKKIRESYES 352
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG---PYGGYKGDTAGDWSRSLY 272
+ +L ++ I + ++ L PT A G+ P M P G + G S S
Sbjct: 353 DMAAMNLQSNLIPGLNLNALGLF-PTTAP---GMGPSMSSITPPGAHGG------SSSFG 402
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P + ++ L P +G +IGK G I Q+ +GA+IK+ + EG D
Sbjct: 403 GHPESE------TVHLFIPALAVGAIIGKQGQHIKQLSHFAGASIKI--APAEGMDAKQR 454
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGK 387
+ + EA + Q R K++ ++ + + VP G +IGK
Sbjct: 455 MV-------IIVGPPEAQFKAQCRIFGKLKEENFFGPKEEVKLEAHIKVPAFAAGRVIGK 507
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLR 443
GG + E++ LT A + ++P++ P E+D+ +V+ISG LA+ + +++ ++R
Sbjct: 508 GGKTVNELQNLTCAEV-VVPRDQTP---DENDQVIVKISGHFFACQLAQRKIQEILAQVR 563
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 24/198 (12%)
Query: 255 PYGGYKGDTAGDWSRS----LYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
P GG +G A RS L + P+ + LR++ P +G +IGK GA I I
Sbjct: 165 PAGGRRGFNARGPPRSGSPGLGARPK---VQSDIPLRMLVPTQFVGAIIGKEGATIRNIT 221
Query: 311 QESGAAIKVDSSSTEG-DDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS 369
+++ + I + G + IT+ S D S + ++ + +++++
Sbjct: 222 KQTHSKIDIHRKENAGAAEKPITIHST---PDGCSNACKTIMDI-------MQKEALDTK 271
Query: 370 FTT----RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQIS 425
FT ++L S +G LIGK G + ++ + T I I P ++L + + +
Sbjct: 272 FTEEIPLKILAHNSFVGRLIGKEGRNLKKIEQETGTKITISPLQDL--TLYNPERTITVK 329
Query: 426 GDLDLAKDALIQVMTRLR 443
G ++ A +VM ++R
Sbjct: 330 GSIEACAKAEEEVMKKIR 347
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 41/181 (22%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P +G+IIG+ G+ +KQL + I+I +++R+V +
Sbjct: 405 PESETVHLFIPALAVGAIIGKQGQHIKQLSHFAGASIKIAPAEGMDAKQRMVII------ 458
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIA----EELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
V P +A FK R+ E G ++ ++ A + VP+ G V
Sbjct: 459 ----------VGPP-EAQFKAQCRIFGKLKEENFFGPKEEV---KLEAHIKVPAFAAGRV 504
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE----LVQISGEASVVKKALCQIAS 210
IGKGG+ V +++ T A++ + +D+ DE +V+ISG CQ+A
Sbjct: 505 IGKGGKTVNELQNLTCAEVVVPRDQ-------TPDENDQVIVKISGHFFA-----CQLAQ 552
Query: 211 R 211
R
Sbjct: 553 R 553
>gi|224079280|ref|XP_002305814.1| predicted protein [Populus trichocarpa]
gi|222848778|gb|EEE86325.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 62/87 (71%), Gaps = 6/87 (6%)
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
S TIEA+++LQ + SE E+ G+I TRLLVP+S++GC++G+G I EMRRL +A I
Sbjct: 61 SQTIEAILQLQNKTSEFSEK--GMI---TRLLVPSSKVGCILGQGSQDINEMRRL-QAEI 114
Query: 404 RILPKENLPKIASEDDEMVQISGDLDL 430
R+ PK PK ASED+E+VQ + ++
Sbjct: 115 RVYPKNEKPKCASEDEELVQANNSPNM 141
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
+ ++ + + E S+ G + +LLVPS ++GC++G+G Q + +R A+IR+
Sbjct: 65 EAILQLQNKTSEFSEKG--MITRLLVPSSKVGCILGQGSQDINEMR-RLQAEIRVYPKNE 121
Query: 181 LPSCALRSDELVQ 193
P CA +ELVQ
Sbjct: 122 KPKCASEDEELVQ 134
>gi|148665207|gb|EDK97623.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_d
[Mus musculus]
Length = 603
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 182/399 (45%), Gaps = 51/399 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 197 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 256
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + +V K+L + +G +IGK G
Sbjct: 257 -------------EAC-----RMILEIMQKEADETKLAEEVPLKILAHNGFVGRLIGKEG 298
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 299 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVRGTIEACANAEIEIMKKLREAFEND 356
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A V +P P+ + G + +
Sbjct: 357 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPPSPPYHPFATHSGYFSSLYPH 416
Query: 270 SLYSAPRDDLSSKEF-SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ S E ++ L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 417 HHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 474
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 475 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 527
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 528 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 562
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 429 PEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 487
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 488 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 532
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 533 GKTVNELQNLTSAEVIVPRDQ 553
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T L +PT +G +IGK G+ I ++ R A+I+I P E P ++ + MV I+G +
Sbjct: 433 TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG-PDVS---ERMVIITGPPEA 488
Query: 431 AKDALIQVMTRLR-ANLFD 448
A ++ +L+ N F+
Sbjct: 489 QFKAQGRIFGKLKEENFFN 507
>gi|431893776|gb|ELK03594.1| Poly(rC)-binding protein 3 [Pteropus alecto]
Length = 339
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 145/307 (47%), Gaps = 42/307 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMRDESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 179
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG-------GYKGDT--- 263
+ + A + + ++ P T + +A P+ + G+
Sbjct: 180 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLSL 239
Query: 264 -AGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+ + +++L P D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 240 HSSEEAQNLMGQPSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 298
Query: 322 SSTEGDD 328
++TEG
Sbjct: 299 NATEGSS 305
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMRDESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R ESGA I + +EG+ C + T+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMRDESGARINI----SEGN-CPERIV-------TI 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 62 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 122 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 173
Query: 452 AVSTFVP 458
A + P
Sbjct: 174 ATIPYRP 180
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 89/234 (38%), Gaps = 72/234 (30%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET----- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 101 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVK 160
Query: 100 --------------------------------NAFEDGDKFVSPAQDALFKVHDRVI--- 124
A+ ++ P D L K+H +
Sbjct: 161 QICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQT 220
Query: 125 ------------------------AEELRGDEDS-DGGHQV-TAKLLVPSDQIGCVIGKG 158
A+ L G D T +L +P+D IGC+IG+
Sbjct: 221 PFPPLGQTNPAFPGEKLSLHSSEEAQNLMGQPSGLDASPPASTHELTIPNDLIGCIIGRQ 280
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G + IR +GAQI+I + S+ + I+G + + A I +RL
Sbjct: 281 GTKINEIRQMSGAQIKIAN-----ATEGSSERQITITGTPANISLAQYLINARL 329
>gi|395536907|ref|XP_003770450.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Sarcophilus
harrisii]
Length = 339
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 144/307 (46%), Gaps = 42/307 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 179
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG-------GYKGD---- 262
+ + A + + ++ P T + +A P+ + G+
Sbjct: 180 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTTPAFPGEKLPL 239
Query: 263 -TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
++ + + +P D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 240 HSSEEAQNLMGQSPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 298
Query: 322 SSTEGDD 328
++TEG
Sbjct: 299 NATEGSS 305
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + +++SNS ++S V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-------IINSMSNSTATSKPPV------------- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 42/192 (21%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD--DCLITVS------- 334
++RL+ +G +IGK G + ++R+ESGA I + +EG+ + ++T++
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIF 69
Query: 335 ------SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKG 388
+ +F ED +++ + +P T RL+VP S+ G LIGKG
Sbjct: 70 KAFAMIAYKFEEDIINSMSNSTATSKP-------------PVTLRLVVPASQCGSLIGKG 116
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
GS I E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 117 GSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLE 168
Query: 449 R--EGAVSTFVP 458
+GA + P
Sbjct: 169 SPPKGATIPYRP 180
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T +L +P+D IGC+IG+ G + IR +GAQI+I + S+ + I+G +
Sbjct: 263 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-----ATEGSSERQITITGTPAN 317
Query: 201 VKKALCQIASRL 212
+ A I +RL
Sbjct: 318 ISLAQYLINARL 329
>gi|47222225|emb|CAG11104.1| unnamed protein product [Tetraodon nigroviridis]
Length = 580
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 192/440 (43%), Gaps = 68/440 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G+ ++ L T SKI I + G+ E+ +T++S + ++
Sbjct: 166 DIPLRMLVPTQFVGAIIGKQGDTIRNLTKQTHSKIDIHRKENAGAAEKPITIHSTPEGSS 225
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
+A + D + E + D+ ++ K+LV ++ +G +IGK G+
Sbjct: 226 -------------NACRTIMDIMQKEAI----DTKFTEEIPLKILVHNNFVGRLIGKEGR 268
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
++ I +TG +I I L+D L + + + G +A ++ ++ +++
Sbjct: 269 NLKKIEQDTGTKITISSLQDLTL----YNPERTITVKGSIEACGRAEEEVMKKIREAYES 324
Query: 216 PSRSQHLLASAISNSHSSSGSLV--GPTAATPIVGIAPLMGPYGGYK------GDTAGDW 267
+ +L ++ I + ++ L G P + P G +GG G W
Sbjct: 325 DVAAMNLQSNLIPGLNLNALGLFPSGSPGMGPSMSSVPPPGAHGGCSFGCSPYGVEGPLW 384
Query: 268 SRSLYSAPRDDL--SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE 325
+ S+ SA L S + ++ L P +G +IGK G I Q+ +GA+IK +
Sbjct: 385 A-SMMSASGQTLAGSPESETVHLFIPTLAVGAIIGKQGQHIKQLSHFAGASIKASRKGMD 443
Query: 326 GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSR 380
++ + EA + Q R K++ ++ + + VP+
Sbjct: 444 PKHRMVIIVGPP----------EAQFKAQCRIFGKLKEENFFGPKEEVKLEAHIKVPSFA 493
Query: 381 IGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMT 440
G +IGKGG + E++ LT A + ++P++ P +D +V+I G + +
Sbjct: 494 AGRVIGKGGKTVNELQNLTCAEV-VVPRDQTPD--EKDQVIVKIIGHFFACQVS------ 544
Query: 441 RLRANLFDREGAVSTFVPVF 460
F R GAV F+ +F
Sbjct: 545 ------FYRRGAVFCFICIF 558
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 24/144 (16%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
PE P +G+IIG+ G+ +KQL + I+ + R+V +
Sbjct: 399 PESETVHLFIPTLAVGAIIGKQGQHIKQLSHFAGASIKASRKGMDPKHRMVII------- 451
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIA----EELRGDEDSDGGHQVTAKLLVPSDQIGCVI 155
V P +A FK R+ E G ++ ++ A + VPS G VI
Sbjct: 452 ---------VGPP-EAQFKAQCRIFGKLKEENFFGPKEEV---KLEAHIKVPSFAAGRVI 498
Query: 156 GKGGQIVQNIRSETGAQIRILKDE 179
GKGG+ V +++ T A++ + +D+
Sbjct: 499 GKGGKTVNELQNLTCAEVVVPRDQ 522
>gi|427796273|gb|JAA63588.1| Putative polyc-binding alphacp-1, partial [Rhipicephalus
pulchellus]
Length = 510
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 157/327 (48%), Gaps = 43/327 (13%)
Query: 39 GPEDTV-YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSAS 96
GP T+ R + +++GSIIG+ G+ +K+ R ++ +KI I + GS ER+VTV ++
Sbjct: 69 GPSVTLTVRLIMQGKEVGSIIGKKGDNIKKFREESGAKINISD---GSCPERIVTVTGST 125
Query: 97 DET-NAFE-DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH----QVTAKLLVPSDQ 150
+ AF KF +L + + + L+ + S+G H VT +L+VP+ Q
Sbjct: 126 EAILKAFSLIARKFEE--MLSLLCLPVQTVGPTLQ-ELQSNGSHLPKPPVTLRLIVPASQ 182
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
G +IGKGG ++ IR TGA I++ E LP+ R+ V +SG A + K + QI
Sbjct: 183 CGSLIGKGGSKIKEIREVTGASIQV-ASEMLPNSTERA---VTVSGTAEAITKCIYQICC 238
Query: 211 RLHDN-------PSRSQHLLASAI---SNSHSSSGSLVGPTA-ATPIVGIAPLMGPYGGY 259
+ ++ P R + + I +++ G P T + +A P
Sbjct: 239 VMMESPPKGATIPYRPKPAMPPVIFAGGQAYTVQGQYAIPHPDLTKLHQLALQHAPL--L 296
Query: 260 KGDTAGDWSRSLYSA--PRDDL----------SSKEFSLRLVCPVANIGGVIGKGGAIIN 307
G + G + +A ++L ++ + + P IG +IGKGG+ IN
Sbjct: 297 PGHSVGAINPQALAALATTNNLRPNTAAAAIATASTTTTEMTIPNDLIGCIIGKGGSKIN 356
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITVS 334
+IRQ SGA IK+ +S D +T+S
Sbjct: 357 EIRQLSGATIKISNSEEGSKDRTVTIS 383
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 82/173 (47%), Gaps = 16/173 (9%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS-- 335
D S ++RL+ +G +IGK G I + R+ESGA I + S +T S+
Sbjct: 68 DGPSVTLTVRLIMQGKEVGSIIGKKGDNIKKFREESGAKINISDGSCPERIVTVTGSTEA 127
Query: 336 --KEF------FEDTLSATIEAVVRLQPRCSEKIERDSGLI--SFTTRLLVPTSRIGCLI 385
K F FE+ LS V + P E S L T RL+VP S+ G LI
Sbjct: 128 ILKAFSLIARKFEEMLSLLCLPVQTVGPTLQELQSNGSHLPKPPVTLRLIVPASQCGSLI 187
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
GKGGS I E+R +T A+I++ E LP + + V +SG + + Q+
Sbjct: 188 GKGGSKIKEIREVTGASIQVA-SEMLP---NSTERAVTVSGTAEAITKCIYQI 236
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 93/256 (36%), Gaps = 78/256 (30%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-----------TVPGSEE------- 87
R + P + GS+IG+GG +K++R T + I++ TV G+ E
Sbjct: 175 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTVSGTAEAITKCIY 234
Query: 88 RVVTVYSASDETNA--------------FEDGDKFVSPAQDA-----LFKVHDRVI--AE 126
++ V S A F G + Q A L K+H + A
Sbjct: 235 QICCVMMESPPKGATIPYRPKPAMPPVIFAGGQAYTVQGQYAIPHPDLTKLHQLALQHAP 294
Query: 127 ELRGDEDSDGGHQVTAKL-------------------------LVPSDQIGCVIGKGGQI 161
L G Q A L +P+D IGC+IGKGG
Sbjct: 295 LLPGHSVGAINPQALAALATTNNLRPNTAAAAIATASTTTTEMTIPNDLIGCIIGKGGSK 354
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISG--EASVVKKALCQIASRLHDNPSRS 219
+ IR +GA I+I E D V ISG EA + + L + LH N
Sbjct: 355 INEIRQLSGATIKISNSEE-----GSKDRTVTISGTPEAINLAQYLINTSMELHKN---- 405
Query: 220 QHLLASAISNSHSSSG 235
L +S +H +SG
Sbjct: 406 ---LTLDLSATHPASG 418
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD---LDL 430
+ +P IGC+IGKGGS I E+R+L+ A I+I E D V ISG ++L
Sbjct: 337 MTIPNDLIGCIIGKGGSKINEIRQLSGATIKISNSEE-----GSKDRTVTISGTPEAINL 391
Query: 431 AKDALIQVMTRLRANL 446
A+ LI L NL
Sbjct: 392 AQ-YLINTSMELHKNL 406
>gi|301604860|ref|XP_002932078.1| PREDICTED: poly(rC)-binding protein 3-like [Xenopus (Silurana)
tropicalis]
Length = 339
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 143/314 (45%), Gaps = 43/314 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL--- 222
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 179
Query: 223 -------LASAISNSHSSSGSLVGP---------------TAATPIVGIAPLMGPYGGYK 260
+ A ++S G P T TP+ P P
Sbjct: 180 PKPASAPVIFAGGQAYSIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAF-PGEKLP 238
Query: 261 GDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
++ + + + D SS+ + L P IG +IG+ G IN+IRQ SGA IK+
Sbjct: 239 LHSSEEAQNLMGQSAGMDASSQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 298
Query: 321 SSSTEGDDCLITVS 334
S+ + IT++
Sbjct: 299 SAMEGSAERQITIT 312
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + +++SNS ++S V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-------IINSMSNSTATSKPPV------------- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 42/192 (21%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD--DCLITVS------- 334
++RL+ +G +IGK G + ++R+ESGA I + +EG+ + ++T++
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIF 69
Query: 335 ------SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKG 388
+ +F ED +++ + +P T RL+VP S+ G LIGKG
Sbjct: 70 KAFAMIAYKFEEDIINSMSNSTATSKP-------------PVTLRLVVPASQCGSLIGKG 116
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
GS I E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 117 GSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLE 168
Query: 449 R--EGAVSTFVP 458
+GA + P
Sbjct: 169 SPPKGATIPYRP 180
>gi|293331673|ref|NP_001170496.1| uncharacterized protein LOC100384498 [Zea mays]
gi|238005660|gb|ACR33865.1| unknown [Zea mays]
Length = 239
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
RLLVP IGCLIG+GGSI+ +MR+ TKANI ++ K + P+ AS DE+V++SG+ D
Sbjct: 1 MNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANI-LISKGDKPRRASSSDELVEVSGEAD 59
Query: 430 LAKDALIQVMTRLR 443
+DAL+Q++ RLR
Sbjct: 60 KLRDALVQIILRLR 73
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 103/219 (47%), Gaps = 54/219 (24%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+ +LLVP+ IGC+IG+GG IV ++R +T A I I K + P A SDELV++SGEA
Sbjct: 1 MNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANILISKGDK-PRRASSSDELVEVSGEAD 59
Query: 200 VVKKALCQIASRLHD----------NPSRSQHLLASAISNSHSSSGSLVGPTAATPIV-- 247
++ AL QI RL + N R L +A S SL G + P +
Sbjct: 60 KLRDALVQIILRLREAVLKESVESQNSDRDGQLTVAA-------SDSLYGSSLPLPALLP 112
Query: 248 ---GIAPLMGPYGGYKGDTAGDWSRSLYSAPR------------DD-------LSSKEFS 285
IAPL GY D G+ R+L PR DD +SK +
Sbjct: 113 HNQQIAPL-----GY--DRRGEPERALEVFPRTSSYGYSSMQVTDDGYGGLPSYASKAYE 165
Query: 286 -----LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
L + P + I V+GK G ++ IR+ SGA I++
Sbjct: 166 EHVPRLEMTVPASGISKVMGKHGTNLDNIRKISGAHIEI 204
>gi|281348784|gb|EFB24368.1| hypothetical protein PANDA_018514 [Ailuropoda melanoleuca]
Length = 346
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 137/306 (44%), Gaps = 41/306 (13%)
Query: 25 KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET--- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 23 KRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 74
Query: 82 VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQV 140
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 75 YPGTTERVCLVQGTAEALNAVHS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK 131
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 132 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQ 188
Query: 201 VKKALCQIASRLHDNPSRSQHL------LASAISNSHSSSGSLVGPTAATPIVGIAPLMG 254
V KA+ I ++ ++P S L +A ++NS+ + P P
Sbjct: 189 VHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLP--------- 239
Query: 255 PYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
A + +A + S + + + P +G ++GKGG + + ++ +G
Sbjct: 240 --------AAAGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTG 291
Query: 315 AAIKVD 320
A I++
Sbjct: 292 ARIQIS 297
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 92 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 149
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 150 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 201
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 84/207 (40%), Gaps = 49/207 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPG--SEERVVTVYSASDE----- 98
+ + P G IIG+GG VK + + + +++ + G +ERVVTV ++
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
Query: 99 ----------------------------TNAFEDGDKFVSPAQDALFKVHDR----VIAE 126
N+ G + SPA D L + AE
Sbjct: 194 SAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPA-DVLPAAAGAAGGFLTAE 252
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCA 185
+L + + ++ VP + +G ++GKGG+ + + TGA+I+I K E LP
Sbjct: 253 KLAAESAKE-----LVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 307
Query: 186 LRSDELVQISGEASVVKKALCQIASRL 212
R V I+G + + A I+ R+
Sbjct: 308 NRR---VTITGSPAATQAAQYLISQRV 331
>gi|383858850|ref|XP_003704912.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Megachile rotundata]
Length = 624
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 182/392 (46%), Gaps = 53/392 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE-T 99
D R L +G+IIGR G ++Q+ T++++ + + GS E+ +T+Y + T
Sbjct: 186 DFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNVGSLEKAITIYGNPENCT 245
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
NA + I E ++ + +S ++T K+L ++ IG +IGKGG
Sbjct: 246 NACKK-------------------ILEVMQQEANSINKGEITLKILAHNNLIGRIIGKGG 286
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
++ I +T +I + + S L + ++ + G + KA I+S+L ++N
Sbjct: 287 TTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGTIENMSKAESMISSKLRQSYEND 344
Query: 217 SRS---QHLLASAISNSHSSSGSLVGPTAATP-IVGIAPLMGPYGGYKGDTAGDWSRSLY 272
++ Q ++ + S + +G ++ P + G P PY G
Sbjct: 345 LQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQASLPPQQG------- 397
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P D F L P +++G +IG G+ I I + SGA++K+ + E D
Sbjct: 398 -VPATDTQETAF---LYIPNSSVGAIIGTKGSHIRNIIRFSGASVKI--APIEQDKPAEQ 451
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCLIG 386
+ ++ T+ + E+ + Q EK+ R+ G ++ T +LVP++++G +IG
Sbjct: 452 QTERKV---TIVGSPESQWKAQYLIFEKM-REEGFVAGTDDVRLTIEILVPSAQVGRIIG 507
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASED 418
KGG + E++R+T + I++ +++ A E+
Sbjct: 508 KGGQNVRELQRVTGSIIKLSEQQSTSPSADEE 539
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 83/175 (47%), Gaps = 23/175 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSE--ERVVTVYSA 95
++T + Y+ P +G+IIG G ++ + + + ++I + P + ER VT+ +
Sbjct: 404 QETAFLYI-PNSSVGAIIGTKGSHIRNIIRFSGASVKIAPIEQDKPAEQQTERKVTIVGS 462
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVI 155
+ A + + +++ E D ++T ++LVPS Q+G +I
Sbjct: 463 PES-------------QWKAQYLIFEKMREEGFVAGTDD---VRLTIEILVPSAQVGRII 506
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
GKGGQ V+ ++ TG+ I+ L ++ S + + V I G V+ A +I S
Sbjct: 507 GKGGQNVRELQRVTGSIIK-LSEQQSTSPSADEEATVHIIGPFFSVQSAQRRIRS 560
>gi|355560757|gb|EHH17443.1| hypothetical protein EGK_13854 [Macaca mulatta]
gi|355747773|gb|EHH52270.1| hypothetical protein EGM_12689 [Macaca fascicularis]
Length = 583
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 197/423 (46%), Gaps = 65/423 (15%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 454
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 455 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 508
Query: 391 I--ITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL-----DLAKDALIQVMTRL 442
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T++
Sbjct: 509 TAKVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQAKVAQRKIQEILTQV 564
Query: 443 RAN 445
+ +
Sbjct: 565 KQH 567
>gi|410897014|ref|XP_003961994.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Takifugu rubripes]
Length = 607
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 182/406 (44%), Gaps = 57/406 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNAFED 104
R + P + +G+IIG+ G +K + T+SK+ I + G+ E+ +T++S + +A
Sbjct: 200 RIIVPTQYVGAIIGKEGLTIKNVTKQTQSKVDIHRKENAGAAEKPITIHSTPEGCSA--- 256
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
A + ++ + A E + ED + K++ ++ IG +IGK G+ ++
Sbjct: 257 -------ACRMIMEIMQKE-ANETKAMED------IPLKIIASNNYIGRLIGKQGRNLKK 302
Query: 165 IRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPSRS 219
I ETG +I I L+D ++ ++ + + G A +I +L ++N +
Sbjct: 303 IEEETGTKITISSLQDLNI----YNNERTITVKGSLEACCNAEVEIMKKLREAYENDIAA 358
Query: 220 QHLLASAI-----------SNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWS 268
+ S I S++ GP + P VG A P+ G+ + +
Sbjct: 359 INQQTSLIPGLNLNALGIFSSTLPVLSPAAGPRSTMPPVGPAGY-NPFLGHSSHLSSLYG 417
Query: 269 RSLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
SA P + ++ L P +G +IGK G I Q+ +GA+IKV +
Sbjct: 418 VPPASAIPHQHAAQEQEVAYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKVAPAEMPDA 477
Query: 328 DCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIG 382
+ + ++ T EA + Q R K++ ++ + T + VP++ G
Sbjct: 478 TERMVI---------ITGTPEAQFKAQGRIFGKLKEENIFTGKEEVRLETHIKVPSTAAG 528
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL 428
+IGKGG + E++ LT A + I+P++ P +++ +V+I G
Sbjct: 529 RVIGKGGKTVNELQSLTSAEV-IVPRDQTPD--EKNEVVVKICGHF 571
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 25/196 (12%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSASDET 99
E V P + +G++IG+ G+ +KQL + I++ +P + ER+V
Sbjct: 432 EQEVAYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKVAPAEMPDATERMV--------- 482
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV--TAKLLVPSDQIGCVIGK 157
++ +A FK R+ +L+ + G +V + VPS G VIGK
Sbjct: 483 --------IITGTPEAQFKAQGRIFG-KLKEENIFTGKEEVRLETHIKVPSTAAGRVIGK 533
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GG+ V ++S T A++ + +D+ + +++ +V+I G + A +I +
Sbjct: 534 GGKTVNELQSLTSAEVIVPRDQ---TPDEKNEVVVKICGHFFANQTAQRKIREIIQQVKQ 590
Query: 218 RSQ-HLLASAISNSHS 232
+ Q H +A+S HS
Sbjct: 591 QEQKHQQGAAVSPQHS 606
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 77/173 (44%), Gaps = 13/173 (7%)
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG-DDCL 330
+ APR + + LR++ P +G +IGK G I + +++ + + + G +
Sbjct: 189 FGAPR----TTQQDLRIIVPTQYVGAIIGKEGLTIKNVTKQTQSKVDIHRKENAGAAEKP 244
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGS 390
IT+ S + SA ++ + ++ + +++ + IG LIGK G
Sbjct: 245 ITIHST---PEGCSAACRMIMEI---MQKEANETKAMEDIPLKIIASNNYIGRLIGKQGR 298
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
+ ++ T I I ++L ++ + + G L+ +A +++M +LR
Sbjct: 299 NLKKIEEETGTKITISSLQDLN--IYNNERTITVKGSLEACCNAEVEIMKKLR 349
>gi|148222025|ref|NP_001090223.1| neuro-oncological ventral antigen 2 [Xenopus laevis]
gi|49256115|gb|AAH72959.1| Nova1 protein [Xenopus laevis]
Length = 413
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 170/387 (43%), Gaps = 87/387 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V +++
Sbjct: 37 KVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAE----- 91
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELR----GDEDSDGG----HQVT--------AKLLV 146
AL VH+ IAE++R G +D G Q T AKL+V
Sbjct: 92 ------------ALLSVHN-FIAEKVREVPQGAPKNDLGVLLPPQSTINAERAKQAKLIV 138
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALC 206
P+ G +IGKGG V+NI E+GA +++ + P+ + + +V +SGE S V+KA+
Sbjct: 139 PNTTAGLIIGKGGATVRNIMEESGAWVQLSQK---PAGSNLHERVVTVSGEPSQVQKAIH 195
Query: 207 QIASRLHDNPSR-SQHLLASAISN-----SHSSSGSLVGPTAATPIVGIAPLMGPYGGYK 260
I + ++P + + HL S I+ + + +GS AA P+ + P
Sbjct: 196 SIIHKSREDPPQGTTHLNISYINTQGPVANSNPTGSPYAGGAAEPV--LTPFQPAPPAPP 253
Query: 261 GDTAGDWSRSLYSAPRDDLSSKEFSLRL-VCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+ GD SA + L+S +S + P+ +GGV ++ E+G ++ +
Sbjct: 254 AISGGDL--LAISAALNTLASYGYSTGMGYNPL--VGGVHPAAVNLLASYTGEAGPSLGL 309
Query: 320 DSSSTEGDDC-LITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPT 378
+ +V+ KE E + VP
Sbjct: 310 GGGGILLEKMGAESVTGKETLE---------------------------------MAVPE 336
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRI 405
+ +G ++GKGG + E + LT A I+I
Sbjct: 337 TLVGAILGKGGKTLVEYQELTGARIQI 363
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 23/177 (12%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ S++
Sbjct: 33 ELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAEA 92
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLI-----------SFTTRLLVPTSRIGCLIG 386
++ I VR P+ + K D G++ + +L+VP + G +IG
Sbjct: 93 LL--SVHNFIAEKVREVPQGAPK--NDLGVLLPPQSTINAERAKQAKLIVPNTTAGLIIG 148
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
KGG+ + + + A +++ K P ++ + +V +SG+ + A+ ++ + R
Sbjct: 149 KGGATVRNIMEESGAWVQLSQK---PAGSNLHERVVTVSGEPSQVQKAIHSIIHKSR 202
>gi|395839827|ref|XP_003792777.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Otolemur garnettii]
Length = 554
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 182/410 (44%), Gaps = 76/410 (18%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
DH ++ + G + + I D R L P + +G+IIG+ G +K + T+S++ I
Sbjct: 173 DHSSREQGHGGSSQARQI----DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIH 228
Query: 80 -ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-G 137
+ G+ E+ VT+++ + T+ +A R+I E ++ + D
Sbjct: 229 RKENSGAAEKPVTIHATPEGTS-------------EAC-----RMILEIMQKEADETKLA 270
Query: 138 HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGE 197
++ K+L + +G +IGK G+ ++ I ETG +I I + L + + + G
Sbjct: 271 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGT 328
Query: 198 ASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG 257
A +I +L + + +LA N+HS S + P P+
Sbjct: 329 VEACANAEIEIMKKLRE--AFENDMLAV---NTHSGYFSSLYPHHQ---------FSPFP 374
Query: 258 GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAI 317
+ +S P ++ + L P +G +IGK GA I Q+ + +GA+I
Sbjct: 375 HH------------HSYPEQEI------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASI 416
Query: 318 KVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTT 372
K+ + EG D VS + ++ EA + Q R K++ ++ +
Sbjct: 417 KI--APAEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEA 467
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+ VP+S G +IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 468 HIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 513
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 76/179 (42%), Gaps = 9/179 (5%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG-DDCLITVSSKEFFED 341
+F LR++ P +G +IGK G I I +++ + + + G + +T+ +
Sbjct: 191 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHA------ 244
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
T T EA + ++ + ++L +G LIGK G + ++ T
Sbjct: 245 TPEGTSEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGT 304
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
I I ++L E + + G ++ +A I++M +LR + AV+T F
Sbjct: 305 KITISSLQDLSIYNPE--RTITVKGTVEACANAEIEIMKKLREAFENDMLAVNTHSGYF 361
>gi|395839831|ref|XP_003792779.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Otolemur garnettii]
Length = 574
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 186/413 (45%), Gaps = 62/413 (15%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
DH ++ + G + + I D R L P + +G+IIG+ G +K + T+S++ I
Sbjct: 173 DHSSREQGHGGSSQARQI----DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIH 228
Query: 80 -ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGG 137
+ G+ E+ VT+++ + T+ +A R+I E ++ + D +
Sbjct: 229 RKENSGAAEKPVTIHATPEGTS-------------EAC-----RMILEIMQKEADETKLA 270
Query: 138 HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGE 197
++ K+L + +G +IGK G+ ++ I ETG +I I + L + + + G
Sbjct: 271 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGT 328
Query: 198 ASVVKKALCQIASRLHD---NPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG 254
A +I +L + N + + A+ I + S+ + G++ L
Sbjct: 329 VEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFS-------TGLSVLPP 381
Query: 255 PYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
P G A + Y P ++ + L P +G +IGK GA I Q+ + +G
Sbjct: 382 PSGPRGAPPAAPYHPFAY--PEQEI------VNLFIPTQAVGAIIGKKGAHIKQLARFAG 433
Query: 315 AAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----IS 369
A+IK+ + EG D VS + ++ EA + Q R K++ ++ +
Sbjct: 434 ASIKI--APAEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVK 484
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+ VP+S G +IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 485 LEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 533
>gi|71895775|ref|NP_001025686.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
gi|62205009|gb|AAH93475.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
Length = 413
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 173/419 (41%), Gaps = 116/419 (27%)
Query: 25 KRRYT-GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-- 81
KR T G+D + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 23 KRSNTAGEDGELFL--------KVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKD 74
Query: 82 -VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELR----GDEDSDG 136
PG+ ERV V +++ +L VH+ IAE++R G +D
Sbjct: 75 FYPGTTERVCLVQGSAE-----------------SLLSVHN-FIAEKVREVPQGGTKNDL 116
Query: 137 G----HQVT--------AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSC 184
G Q T AKL+VP+ G +IGKGG V++I E+GA +++ + P+
Sbjct: 117 GVLLPPQTTINAERAKQAKLIVPNTTAGLIIGKGGATVRSIMEESGAWVQLSQKPAGPNL 176
Query: 185 ALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAAT 244
R +V +SGE S V+KA+ I + ++P + L + +NS
Sbjct: 177 HER---VVTVSGEPSQVQKAIRSIIHKSREDPPQGTTHLNISYTNSQG------------ 221
Query: 245 PIVGIAPLMGPYGGYKGD----------------TAGDWSRSLYSAPRDDLSSKEFSLRL 288
P+ P PY G + T GD SA + L+S +S +
Sbjct: 222 PVANSNPTGSPYAGGSAEQVLTPFQPAPPAPPAITGGDL--LAISAALNTLASYGYSTGM 279
Query: 289 -VCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDC-LITVSSKEFFEDTLSAT 346
P+ +GGV ++ E+G A+ + + +V+ KE E
Sbjct: 280 GFNPL--VGGVHPAAVNLLASYTGEAGPALGLGGGGILLEKMGAESVTGKETLE------ 331
Query: 347 IEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+ VP + +G ++GKGG + E + LT A I+I
Sbjct: 332 ---------------------------MAVPETLVGAILGKGGKTLVEYQELTGARIQI 363
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS-----STEGDDCLITVSSKE 337
E L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ S++
Sbjct: 33 ELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAES 92
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
++ I VR P+ K + L TT +L+VP + G +IGKG
Sbjct: 93 LL--SVHNFIAEKVREVPQGGTKNDLGVLLPPQTTINAERAKQAKLIVPNTTAGLIIGKG 150
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P + + +V +SG+ + A+ ++ + R
Sbjct: 151 GATVRSIMEESGAWVQLSQKPAGPNL---HERVVTVSGEPSQVQKAIRSIIHKSR 202
>gi|348511523|ref|XP_003443293.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 321
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 142/301 (47%), Gaps = 37/301 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDTI------ 70
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ +
Sbjct: 71 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 125
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL--- 222
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + +
Sbjct: 126 RESTGAQVQVAGD-MLPNSTERA---VTISGTPEAIIQCVRQICVVMLESPPKGATIPYR 181
Query: 223 ---LASAISNSHSSSGSLVG------PTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
++ + S + ++ G P T + +A P+ ++ +
Sbjct: 182 PKPTSTPVIFSGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPF--------TPLGQTTPA 233
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
P D S + L P IG +IG+ G IN+IRQ SGA IK+ ++ + IT+
Sbjct: 234 FPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITI 293
Query: 334 S 334
+
Sbjct: 294 T 294
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 71/222 (31%)
Query: 133 DSDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R
Sbjct: 7 QSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER--- 59
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 60 IVTITGPTDTIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV--- 100
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
+LRLV P + G +IGKGG+ I ++R
Sbjct: 101 ----------------------------------TLRLVVPASQCGSLIGKGGSKIKEMR 126
Query: 311 QESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR 352
+ +GA ++V D L + + T+S T EA+++
Sbjct: 127 ESTGAQVQV------AGDMLPNSTERAV---TISGTPEAIIQ 159
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 56/216 (25%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET----- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ +
Sbjct: 103 RLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVR 162
Query: 100 --------------------------------NAFEDGDKFVSPAQDALFKVHDRVIAEE 127
A+ ++ P D L K+H + +
Sbjct: 163 QICVVMLESPPKGATIPYRPKPTSTPVIFSGGQAYTIQGQYAIPHPDQLTKLHQLAMQQT 222
Query: 128 -----------LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
G + S T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 223 PFTPLGQTTPAFPGLDASPPAS--THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 280
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+ S+ + I+G + + A I +RL
Sbjct: 281 N-----AMEGSSERQITITGTPANISLAQYLINARL 311
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 34/188 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDTIFKAFA 75
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 76 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 122
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--E 450
EMR T A +++ + LP + + V ISG +A+IQ + ++ + + +
Sbjct: 123 KEMRESTGAQVQVA-GDMLP---NSTERAVTISG----TPEAIIQCVRQICVVMLESPPK 174
Query: 451 GAVSTFVP 458
GA + P
Sbjct: 175 GATIPYRP 182
>gi|410897345|ref|XP_003962159.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 321
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 142/301 (47%), Gaps = 37/301 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDTI------ 70
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ +
Sbjct: 71 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 125
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL--- 222
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + +
Sbjct: 126 RESTGAQVQVAGD-MLPNSTERA---VTISGTPEAIIQCVKQICVVMLESPPKGATIPYR 181
Query: 223 ---LASAISNSHSSSGSLVG------PTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
++ + S + ++ G P T + +A P+ ++ +
Sbjct: 182 PKPASTPVIFSGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPF--------TPLGQATPA 233
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
P D S + L P IG +IG+ G IN+IRQ SGA IK+ ++ + IT+
Sbjct: 234 FPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITI 293
Query: 334 S 334
+
Sbjct: 294 T 294
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 71/220 (32%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +V
Sbjct: 9 EGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---IV 61
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 62 TITGPTDTIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV----- 100
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LRLV P + G +IGKGG+ I ++R+
Sbjct: 101 --------------------------------TLRLVVPASQCGSLIGKGGSKIKEMRES 128
Query: 313 SGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR 352
+GA ++V D L + + T+S T EA+++
Sbjct: 129 TGAQVQV------AGDMLPNSTERAV---TISGTPEAIIQ 159
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 34/188 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDTIFKAFA 75
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 76 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 122
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--E 450
EMR T A +++ + LP + + V ISG +A+IQ + ++ + + +
Sbjct: 123 KEMRESTGAQVQVA-GDMLP---NSTERAVTISG----TPEAIIQCVKQICVVMLESPPK 174
Query: 451 GAVSTFVP 458
GA + P
Sbjct: 175 GATIPYRP 182
>gi|345497208|ref|XP_001599286.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Nasonia vitripennis]
Length = 643
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 178/392 (45%), Gaps = 53/392 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE-T 99
D R L +G+IIGR G ++Q+ T++++ + + GS E+ +T+Y + T
Sbjct: 187 DFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNLGSLEKAITIYGNPENCT 246
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
NA + I E + + + ++T K+L ++ IG +IGKGG
Sbjct: 247 NACKK-------------------ILEVMHQEASNTNKGEITLKILAHNNLIGRIIGKGG 287
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
++ I +T +I + + S L + ++ + G + KA I+++L ++N
Sbjct: 288 NTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGSIENMSKAEAMISNKLRQSYEND 345
Query: 217 SRS---QHLLASAISNSHSSSGSLVGPTAATP-IVGIAPLMGPYGGYKGDTAGDWSRSLY 272
++ Q ++ + S + +G + P + G P PY G +
Sbjct: 346 LQAMAPQSMMFPGLHPMAMMSTASMGYNSRGPALYGTGPAPYPYQSNLTPQQGVLT---- 401
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
D F L P ++G +IG G+ I I + SGA++K+ + E D
Sbjct: 402 ----SDAQETTF---LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKI--APLESDKPAEQ 452
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCLIG 386
+ ++ T+ + E+ + Q EK+ R+ G +S T +LVP++++G +IG
Sbjct: 453 QTERKV---TIVGSPESQWKAQYLIFEKM-REEGFVSGTEDVRLTVEILVPSAQVGRIIG 508
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASED 418
KGG + E++R+T + I++ ++ P A E+
Sbjct: 509 KGGQNVRELQRVTGSVIKLSEQQATPPTADEE 540
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T + Y+ P +G+IIG G ++ + + + ++I + ER VT+ +
Sbjct: 405 QETTFLYI-PNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLESDKPAEQQTERKVTIVGS 463
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEEL-RGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E G ED ++T ++LVPS Q+G +
Sbjct: 464 PES-------------QWKAQYLIFEKMREEGFVSGTEDV----RLTVEILVPSAQVGRI 506
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
IGKGGQ V+ ++ TG+ I++ + + P A
Sbjct: 507 IGKGGQNVRELQRVTGSVIKLSEQQATPPTA 537
>gi|443687982|gb|ELT90806.1| hypothetical protein CAPTEDRAFT_1308 [Capitella teleta]
Length = 333
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 141/326 (43%), Gaps = 64/326 (19%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSP 111
++ GSIIG+ G+ VK+ R D+ +KI I ++ ER+VTV +D+ F+
Sbjct: 11 KEAGSIIGKKGDNVKKFREDSGAKINISDS--SCPERIVTVTGTTDQI--FKAFTMICKK 66
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
++ + H+ + VT +L+VP+ Q G +IGKGG ++ IR TGA
Sbjct: 67 FEEDIVNTHNSTTLPK----------PPVTLRLIVPASQCGSLIGKGGAKIKEIRELTGA 116
Query: 172 QIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ----------- 220
I++ E LP+ R+ V +SG+A + + + I + ++P +
Sbjct: 117 SIQV-ASEMLPNSTERA---VTVSGQADAITQCIYNICCVMLESPPKGATIPYRPKPCVP 172
Query: 221 --HLLASAISNSHSSSGSLV-----GPTAATPIVG--IAPLMGP---------------- 255
L +S + S G + P A P V PL P
Sbjct: 173 PVMLPSSCGGQAFSIQGQQILLPPSHPNATQPDVSPHCVPLPPPCFISLRARLQTHSLIC 232
Query: 256 ------YGGYKGDTAGDWSR--SLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
Y G A + + P ++S++ + + P IG +IG+GGA IN
Sbjct: 233 IIIRDVYPGMNAAMAAGIPQFAPRQAGPGANMSAQTHEMTI--PNDLIGCIIGRGGAKIN 290
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITV 333
+IRQ SGA IK+ ++ D +T+
Sbjct: 291 EIRQLSGATIKIANADEGSSDRKVTI 316
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 17/150 (11%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLS 344
+LR++ G +IGK G + + R++SGA I + SS +T ++ + F+
Sbjct: 3 TLRMIMQGKEAGSIIGKKGDNVKKFREDSGAKINISDSSCPERIVTVTGTTDQIFK---- 58
Query: 345 ATIEAVVRLQPRCSEKIERDSGLISF-----TTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
A + + E I + T RL+VP S+ G LIGKGG+ I E+R LT
Sbjct: 59 ----AFTMICKKFEEDIVNTHNSTTLPKPPVTLRLIVPASQCGSLIGKGGAKIKEIRELT 114
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDLD 429
A+I++ E LP + + V +SG D
Sbjct: 115 GASIQVA-SEMLP---NSTERAVTVSGQAD 140
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + GS+IG+GG +K++R T + I++ E +P S ER VTV +D
Sbjct: 88 RLIVPASQCGSLIGKGGAKIKEIRELTGASIQVASEMLPNSTERAVTVSGQAD 140
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILK-DEHLPSCALRSDELVQISGEAS 199
T ++ +P+D IGC+IG+GG + IR +GA I+I DE SD V I G
Sbjct: 268 THEMTIPNDLIGCIIGRGGAKINEIRQLSGATIKIANADEG------SSDRKVTIMGSLE 321
Query: 200 VVKKALCQIASR 211
+ A I +R
Sbjct: 322 TIHAAQYMINAR 333
>gi|397493518|ref|XP_003817651.1| PREDICTED: RNA-binding protein Nova-2 [Pan paniscus]
Length = 349
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 137/299 (45%), Gaps = 31/299 (10%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 9 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 68
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 69 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 125
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P S
Sbjct: 126 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSC 182
Query: 222 L------LASAISNSHSSSGSLVGPTAATP------------IVGIAPL--MGPYGGYKG 261
L +A ++NS+ + P P ++G A L +G +
Sbjct: 183 LNISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASGLLGPAGLAGVGAFPAXXX 242
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
AG L + S+KE + + P +G ++GKGG + + ++ +GA I++
Sbjct: 243 XXAGAAGGFLTAEKLAAESAKEL-VEIAVPENLVGAILGKGGKTLVEYQELTGARIQIS 300
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 5 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 64
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 65 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 122
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 123 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 174
>gi|410900550|ref|XP_003963759.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 434
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 143/315 (45%), Gaps = 76/315 (24%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E S ER+VT+ A++
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SSPERIVTITGATE-------- 69
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+F+ +IA++ D + + VT +L+ P Q G +IGKG
Sbjct: 70 ---------AIFRAFA-MIAQKFEEDISAAMSNSSVTSKPPVTLRLVFPGSQCGSLIGKG 119
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP R+ V ISG + + + I S + ++P +
Sbjct: 120 GSKIKEIRETTGAQVQVAGD-MLPDSTERA---VTISGTPQAITQCVRHICSVMLESPPK 175
Query: 219 SQHLLASAISNSHSSSGSLVG--PTAATPIVGIAPLMGP-YGGYKGDTAGDWS------- 268
G+ + P A T VG+ ++ P + G ++
Sbjct: 176 ----------------GATIPYRPKAVT--VGVHAVLAPQQSAHAFAIPGQYTFAHQDLT 217
Query: 269 ----------------RSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+S + P D S+ S + P IG +IG+ G+ IN+IRQ
Sbjct: 218 KLHQLAMQHIPLPSLGQSNPTFPGLDPSAPTSSQEMAIPNDFIGCIIGRQGSKINEIRQV 277
Query: 313 SGAAIKVDSSSTEGD 327
SGA IK+ +S+T+G
Sbjct: 278 SGAHIKI-ASTTDGS 291
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 68/132 (51%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
+LRL+ +G +IGK G + ++R+ESGA I + +EG SS E T+
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEG-------SSPERIV-TI 64
Query: 344 SATIEAVVRLQPRCSEKIERD-SGLIS---------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ EA+ R ++K E D S +S T RL+ P S+ G LIGKGGS I
Sbjct: 65 TGATEAIFRAFAMIAQKFEEDISAAMSNSSVTSKPPVTLRLVFPGSQCGSLIGKGGSKIK 124
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 125 EIRETTGAQVQV 136
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 62/191 (32%)
Query: 131 DEDSDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRS 188
+ SDG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I +
Sbjct: 6 EMSSDGSLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGS-------SP 58
Query: 189 DELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVG 248
+ +V I+G + +A IA + ++ +++A+SNS
Sbjct: 59 ERIVTITGATEAIFRAFAMIAQKFEED-------ISAAMSNS------------------ 93
Query: 249 IAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQ 308
S+ S P +LRLV P + G +IGKGG+ I +
Sbjct: 94 ---------------------SVTSKP-------PVTLRLVFPGSQCGSLIGKGGSKIKE 125
Query: 309 IRQESGAAIKV 319
IR+ +GA ++V
Sbjct: 126 IRETTGAQVQV 136
>gi|328723977|ref|XP_001952825.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 1 [Acyrthosiphon pisum]
Length = 563
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 186/428 (43%), Gaps = 71/428 (16%)
Query: 38 IGPEDTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYS 94
IG T + R L +G+IIGRGG ++Q+ T++++ + + GS E+ +T+Y
Sbjct: 141 IGNRQTEFPLRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNVGSLEKAITIYG 200
Query: 95 ASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGC 153
+ TNA R I E ++ + + V K+L ++ IG
Sbjct: 201 NPENCTNAC-------------------RKILEVMQQEATNTNKSDVILKILAHNNLIGR 241
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
+IGK G ++ I SET +I + + S + ++ + G + KA QI+++L
Sbjct: 242 IIGKEGNTIKRIMSETETKITVSSINDINS--FNYERIITVKGSIENMSKAEAQISAKLR 299
Query: 214 DNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRS--- 270
+ ++ L S + G + P A GI Y G G T+
Sbjct: 300 QS---FENDLQSMAPQTVMFPG--LHPMAMMSATGIT-----YPGRGGPTSYQQFAPAPY 349
Query: 271 ----------LYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
+ A D+ F L P + +G +IG G+ I + + SGA++KV
Sbjct: 350 PPMYPSTIPPINPALAADVQETAF---LFIPNSAVGAIIGTKGSNIRSMIRFSGASVKVA 406
Query: 321 SSSTE--------GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS--- 369
S+ E GD +S++ T+ T ++ + Q +K+ RD G +
Sbjct: 407 STENEKQGVVGNAGDANSAQQASRKV---TIVGTADSQWKAQGMIFDKL-RDEGFVPNNE 462
Query: 370 ---FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
T +LVP+S++G +IG+GGS + E++R+T + I+ LP + +ED V I G
Sbjct: 463 EVRLTVEILVPSSQVGRIIGRGGSNVRELQRVTGSIIK-LPTQGSTD-GTEDTTTVHIIG 520
Query: 427 DLDLAKDA 434
+ A
Sbjct: 521 HFLATQSA 528
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 10/165 (6%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFFED 341
EF LR++ +G +IG+GG+ I QI Q++ A + V G + IT+ E+
Sbjct: 147 EFPLRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNVGSLEKAITIYGNP--EN 204
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
+A + + +Q + + D L ++L + IG +IGK G+ I + T+
Sbjct: 205 CTNACRKILEVMQQEATNTNKSDVIL-----KILAHNNLIGRIIGKEGNTIKRIMSETET 259
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
I + ++ E ++ + G ++ A Q+ +LR +
Sbjct: 260 KITVSSINDINSFNYE--RIITVKGSIENMSKAEAQISAKLRQSF 302
>gi|307189125|gb|EFN73581.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Camponotus
floridanus]
Length = 587
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 184/407 (45%), Gaps = 64/407 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQL------RIDTKSKIRIGETVPGSEERVVTVYSA 95
D R L +G+IIGR G ++Q+ R+D K +G S E+ +T+Y
Sbjct: 146 DFPLRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNVG-----SLEKAITIYGN 200
Query: 96 SDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ TNA + I + ++ + S ++T K+L ++ IG +
Sbjct: 201 PENCTNACKK-------------------ILDVMQQEAASTNKGEITLKILAHNNLIGRI 241
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL-- 212
IGKGG ++ I +T ++I + + S L + ++ + G + KA I+S+L
Sbjct: 242 IGKGGNTIKRIMQDTDSKITVSSINDINSFNL--ERIITVKGTIENMSKAESMISSKLRQ 299
Query: 213 -HDNPSRS---QHLLASAISNSHSSSGSLVGPTAATP-IVGIAPLMGPYGGYKGDTAGDW 267
++N ++ Q ++ + S + +G ++ P + G P PY G
Sbjct: 300 SYENDLQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQSSLPTQQG-- 357
Query: 268 SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
P D F L P ++G +IG G+ I I + SGA++K+ + E D
Sbjct: 358 ------VPASDTQETTF---LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKI--APLEQD 406
Query: 328 DCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRI 381
+ ++ T+ + E+ + Q EK+ R+ G ++ T +LVP++++
Sbjct: 407 KPAEQQTERKV---TIIGSPESQWKAQYLIFEKM-REEGYVAGTEDVRLTIEILVPSTQV 462
Query: 382 GCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL 428
G +IGKGG + E++R+T + I++ ++ P ++E++ V I G
Sbjct: 463 GRIIGKGGQNVRELQRVTGSVIKLSEQQATPP-SAEEETTVHIIGPF 508
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 76/151 (50%), Gaps = 24/151 (15%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSE--ERVVTVYSA 95
++T + Y+ P +G+IIG G ++ + + + ++I + P + ER VT+ +
Sbjct: 364 QETTFLYI-PNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIIGS 422
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAE-ELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E + G ED ++T ++LVPS Q+G +
Sbjct: 423 PES-------------QWKAQYLIFEKMREEGYVAGTEDV----RLTIEILVPSTQVGRI 465
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
IGKGGQ V+ ++ TG+ I++ + + P A
Sbjct: 466 IGKGGQNVRELQRVTGSVIKLSEQQATPPSA 496
>gi|426218399|ref|XP_004003434.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Ovis aries]
Length = 336
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 143/306 (46%), Gaps = 43/306 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL-LA 224
R TGAQ+++ D LP+ R+ V ISG + + + QI + + S+S ++
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLEVQSKSPPRGVS 179
Query: 225 SAISNSHSSSGSLVGPTAATPIVG---------------------IAPLMGPYGGYKG-D 262
++ +S+ + A I G PL + G D
Sbjct: 180 RVVAPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGTD 239
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
A + RS ++ D S + L P IG +IG+ G IN+IRQ SGA IK+ ++
Sbjct: 240 RAVPFVRSPWAC--LDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-AN 296
Query: 323 STEGDD 328
+TEG
Sbjct: 297 ATEGSS 302
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 32/170 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
E+R T A +++ + LP + + V ISG DA+IQ + ++
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQI 162
>gi|345485195|ref|XP_001603038.2| PREDICTED: far upstream element-binding protein 1-like isoform 1
[Nasonia vitripennis]
Length = 767
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 167/387 (43%), Gaps = 57/387 (14%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED----- 104
P + +G IIGRGGE + +L+ +T KI++ G ER T+ + D N ++
Sbjct: 101 PDKMVGLIIGRGGEQITRLQSETGCKIQMAAESGGMPERTCTLTGSRDAVNRAKELVQSI 160
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSD----GGHQVTAKLLVPSDQIGCVIGKGGQ 160
++ V P +D + + GH ++++P ++G +IGKGG+
Sbjct: 161 VNQRVKPGEDLIPGANPPYPGPASSASSSVTASILAGHPGFVEIMIPGPKVGLIIGKGGE 220
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA-------LCQIASRLH 213
++ ++ ++GA++ +++D ++ ++I+G+ V+ A + + +L+
Sbjct: 221 TIKQLQEKSGAKMVVIQD----GPGQEQEKPLRITGDPQKVEHAKQLVYELIAEKEMQLY 276
Query: 214 DNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
+ +R+ S + +S SG G+ YG ++G+ + +S
Sbjct: 277 NRGTRNFSSNNSFSQDGNSESGEDRRGN------GVTGRPSEYGSWEGNRPAGEGKVEFS 330
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLIT 332
P P G +IGKGG I +I Q++GA ++D + D D T
Sbjct: 331 YP--------------VPSNKCGIIIGKGGVTIKEINQQTGAHCELDRRNPGTDTDKFFT 376
Query: 333 V--------SSKEFFEDTLSATIEAVVRLQP--RCSE----KIERDSGLISFTTRLLVPT 378
+ +K F + L + + P R +E + R + T VPT
Sbjct: 377 IRGTPEQVEHAKRVFAEKLGGGMGSSSNGYPTGRPNEYGGWDVNRQGNKVEVT--YPVPT 434
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRI 405
++ G +IGKGG I ++ + T A+ +
Sbjct: 435 NKCGIIIGKGGETIKQINQQTGAHCEL 461
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 78/194 (40%), Gaps = 48/194 (24%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+ Y P K G IIG+GG +K++ T + + PG+ D
Sbjct: 329 FSYPVPSNKCGIIIGKGGVTIKEINQQTGAHCELDRRNPGT------------------D 370
Query: 105 GDKFV----SPAQDALFKVHDRVIAEELR-------------------GDEDSDGGHQVT 141
DKF +P Q K RV AE+L G + + G++V
Sbjct: 371 TDKFFTIRGTPEQVEHAK---RVFAEKLGGGMGSSSNGYPTGRPNEYGGWDVNRQGNKVE 427
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVV 201
VP+++ G +IGKGG+ ++ I +TGA + D P +++ I G V
Sbjct: 428 VTYPVPTNKCGIIIGKGGETIKQINQQTGAHCEL--DRRNP--GTETEKFFTIKGTPEQV 483
Query: 202 KKALCQIASRLHDN 215
+ A + +L +N
Sbjct: 484 EHAQRIFSEKLGNN 497
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 117/303 (38%), Gaps = 79/303 (26%)
Query: 144 LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKK 203
+ VP +G +IG+GG+ + ++SETG +I Q++ E+ + +
Sbjct: 98 IRVPDKMVGLIIGRGGEQITRLQSETGCKI-------------------QMAAESGGMPE 138
Query: 204 ALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDT 263
C + D +R++ L+ S I N G + P A P G A
Sbjct: 139 RTCTLTGS-RDAVNRAKELVQS-IVNQRVKPGEDLIPGANPPYPGPA------------- 183
Query: 264 AGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV--DS 321
S + S L+ + ++ P +G +IGKGG I Q++++SGA + V D
Sbjct: 184 ----SSASSSVTASILAGHPGFVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDG 239
Query: 322 SSTEGDDCL-IT----------------VSSKE----------------FFEDTLSATIE 348
E + L IT ++ KE F +D S + E
Sbjct: 240 PGQEQEKPLRITGDPQKVEHAKQLVYELIAEKEMQLYNRGTRNFSSNNSFSQDGNSESGE 299
Query: 349 ------AVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKAN 402
R S + R +G VP+++ G +IGKGG I E+ + T A+
Sbjct: 300 DRRGNGVTGRPSEYGSWEGNRPAGEGKVEFSYPVPSNKCGIIIGKGGVTIKEINQQTGAH 359
Query: 403 IRI 405
+
Sbjct: 360 CEL 362
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 84/179 (46%), Gaps = 29/179 (16%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV--DSSSTEGDDCLITVS------SKEFFEDTLSAT 346
+G +IG+GG I +++ E+G I++ +S C +T S +KE + ++
Sbjct: 105 VGLIIGRGGEQITRLQSETGCKIQMAAESGGMPERTCTLTGSRDAVNRAKELVQSIVNQR 164
Query: 347 IEAVVRLQPRCSEKIERD-------------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ L P + +G F +++P ++G +IGKGG I
Sbjct: 165 VKPGEDLIPGANPPYPGPASSASSSVTASILAGHPGFV-EIMIPGPKVGLIIGKGGETIK 223
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGD---LDLAKDALIQVMTRLRANLFDR 449
+++ + A + ++ ++ P E ++ ++I+GD ++ AK + +++ L++R
Sbjct: 224 QLQEKSGAKMVVI--QDGP--GQEQEKPLRITGDPQKVEHAKQLVYELIAEKEMQLYNR 278
>gi|320583120|gb|EFW97336.1| RNA binding protein, putative [Ogataea parapolymorpha DL-1]
Length = 404
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 144/338 (42%), Gaps = 53/338 (15%)
Query: 26 RRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS 85
R T DD P +R LC I + +I+G+GGE + +++ + +++ + E + G
Sbjct: 70 HRPTNDD-------PTYVHFRMLCSINETAAIVGKGGETINRIKEMSSARVNVSENLKGI 122
Query: 86 EERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLL 145
ERV+TV ++ +V+ A F + R I +E + Q+ KLL
Sbjct: 123 PERVITVRGPAE----------YVAKA----FGLITRAIMDEPFNQASTVESKQINLKLL 168
Query: 146 VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKAL 205
P IG +IGK G + I + A ++ D+ LP+ +D ++ I+G A + A
Sbjct: 169 FPHTIIGYIIGKRGARFREIEDNSAAALK-ASDQILPAS---TDRILHITGVADAIHIAT 224
Query: 206 CQIASRLHDNPSRSQHLLASAISN---------------SHSSSGS--------LVGPTA 242
+A + ++ QHL + N S + G+ + P
Sbjct: 225 YYVAQTVIEH---KQHLAKAVFYNPANCNQPSTPVGGNASRMAYGNGYPPQVMQVPAPIM 281
Query: 243 ATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKE-FSLRLVCPVANIGGVIGK 301
+P +G P+ PYG Y A + AP S +E + + P +IG VIGK
Sbjct: 282 QSPYMG-QPVQQPYGQYIPGAAAGAVAAPVPAPMQAQSGQEKINQDIYVPQMHIGLVIGK 340
Query: 302 GGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
GG + IR +G +KV+ + +T+ S F
Sbjct: 341 GGKNLKDIRTITGCYVKVNDEVPGATERKLTLMSTSPF 378
>gi|328723971|ref|XP_003247997.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Acyrthosiphon pisum]
Length = 559
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 186/428 (43%), Gaps = 71/428 (16%)
Query: 38 IGPEDTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYS 94
IG T + R L +G+IIGRGG ++Q+ T++++ + + GS E+ +T+Y
Sbjct: 141 IGNRQTEFPLRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNVGSLEKAITIYG 200
Query: 95 ASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGC 153
+ TNA R I E ++ + + V K+L ++ IG
Sbjct: 201 NPENCTNAC-------------------RKILEVMQQEATNTNKSDVILKILAHNNLIGR 241
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
+IGK G ++ I SET +I + + S + ++ + G + KA QI+++L
Sbjct: 242 IIGKEGNTIKRIMSETETKITVSSINDINS--FNYERIITVKGSIENMSKAEAQISAKLR 299
Query: 214 DNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRS--- 270
+ ++ L S + G + P A GI Y G G T+
Sbjct: 300 QS---FENDLQSMAPQTVMFPG--LHPMAMMSATGIT-----YPGRGGPTSYQQFAPAPY 349
Query: 271 ----------LYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
+ A D+ F L P + +G +IG G+ I + + SGA++KV
Sbjct: 350 PPMYPSTIPPINPALAADVQETAF---LFIPNSAVGAIIGTKGSNIRSMIRFSGASVKVA 406
Query: 321 SSSTE--------GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS--- 369
S+ E GD +S++ T+ T ++ + Q +K+ RD G +
Sbjct: 407 STENEKQGVVGNAGDANSAQQASRKV---TIVGTADSQWKAQGMIFDKL-RDEGFVPNNE 462
Query: 370 ---FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
T +LVP+S++G +IG+GGS + E++R+T + I+ LP + +ED V I G
Sbjct: 463 EVRLTVEILVPSSQVGRIIGRGGSNVRELQRVTGSIIK-LPTQGSTD-GTEDTTTVHIIG 520
Query: 427 DLDLAKDA 434
+ A
Sbjct: 521 HFLATQSA 528
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 10/165 (6%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFFED 341
EF LR++ +G +IG+GG+ I QI Q++ A + V G + IT+ E+
Sbjct: 147 EFPLRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNVGSLEKAITIYGNP--EN 204
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
+A + + +Q + + D L ++L + IG +IGK G+ I + T+
Sbjct: 205 CTNACRKILEVMQQEATNTNKSDVIL-----KILAHNNLIGRIIGKEGNTIKRIMSETET 259
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
I + ++ E ++ + G ++ A Q+ +LR +
Sbjct: 260 KITVSSINDINSFNYE--RIITVKGSIENMSKAEAQISAKLRQSF 302
>gi|410970839|ref|XP_003991884.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Felis catus]
Length = 542
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 186/417 (44%), Gaps = 62/417 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 136 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 195
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 196 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 237
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 238 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLREAFEND 295
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P AP P+ + G +
Sbjct: 296 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPTGPRGAPPAPPYHPFATHSG-----YFS 350
Query: 270 SLYSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
SLY P ++ + L P +G +IGK GA I Q+ + +GA+IK+ +
Sbjct: 351 SLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--AP 408
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPT 378
EG D VS + ++ EA + Q R K++ ++ + + VP+
Sbjct: 409 AEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPS 461
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
S G +IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 462 STAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 514
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 368 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 426
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 427 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 471
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 472 GKTVNELQNLTSAEVIVPRDQ 492
>gi|348582424|ref|XP_003476976.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Cavia porcellus]
Length = 532
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 183/413 (44%), Gaps = 54/413 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 126 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 185
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 186 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 227
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 228 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGAVEACASAEVEIMKKLREAFEND 285
Query: 217 SRSQHLLASAISNSHSSS--------GSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWS 268
+ H A+ I + S+ L P AP P+ + G + +
Sbjct: 286 MLAVHQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPTAPYH-PFATHSGYFSSLYP 344
Query: 269 RSLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG
Sbjct: 345 HHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGP 402
Query: 328 DCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIG 382
D VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 403 D----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAG 455
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 456 RVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 504
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 358 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 416
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 417 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 461
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 462 GKTVNELQNLTSAEVIVPRDQ 482
>gi|328709627|ref|XP_003244018.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Acyrthosiphon
pisum]
Length = 525
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 188/418 (44%), Gaps = 62/418 (14%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIVK+ R ++ +KI I + GS ER+VT+ S T A +
Sbjct: 22 KEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTI---SGSTEAIYKAFSLIC 75
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
KV + + + + + G +T +L+VP+ Q G +IGKGG ++ IR TG
Sbjct: 76 ------TKVEEFIEMQNGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIKEIREATG 129
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN-------PSRSQH-- 221
AQI++ D LP R+ V ++G + + + I + + ++ P R++
Sbjct: 130 AQIQVASDV-LPQSTERA---VTLTGTRDSITQCIFHICAVMVESPPKGVTIPYRAKPQM 185
Query: 222 ----LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD 277
+LA + + +S+GS G T +VG G ++ + P
Sbjct: 186 GAPVILAGGQAFTLASAGSAAGCDVGTMMVG---------------GGPYNAPMLMVPPS 230
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
++ SL L+ P+ + K +Q+ + +G + ++ G +
Sbjct: 231 PGAAA--SLGLIDPLDY---PLLKNAFGPSQLGKLTGNPLAGLAALGLGSL---GGPANS 282
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
F L+A + +R I SG T + VP IGC+IGKGG+ I E+R+
Sbjct: 283 FNPAALAALAGSQLRSN-GSGANINSRSGGGQQTHEMTVPNDLIGCIIGKGGTKIAEIRQ 341
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL-----RANLFDRE 450
++ A IRI E+ AS D + I+G+ D AL Q + + RA++ E
Sbjct: 342 ISGAMIRISNCEDREGSAS-TDRTITITGNPD--SVALAQYLINMSLEIQRASMLQSE 396
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 5/132 (3%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+DD S+ +LRL+ +G +IGK G I+ + R+ESGA I + S I+ S+
Sbjct: 6 KDD-SNISLTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTISGST 64
Query: 336 KEFFE--DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ ++ + +E + +Q + G T RL+VP S+ G LIGKGG+ I
Sbjct: 65 EAIYKAFSLICTKVEEFIEMQ--NGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIK 122
Query: 394 EMRRLTKANIRI 405
E+R T A I++
Sbjct: 123 EIREATGAQIQV 134
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV+ R E+GA+I I SC R +V ISG
Sbjct: 13 LTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG----SCPER---IVTISGSTE 65
Query: 200 VVKKALCQIASRLHD 214
+ KA I +++ +
Sbjct: 66 AIYKAFSLICTKVEE 80
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSAS 96
IG R + P + GS+IG+GG +K++R T ++I++ + +P S ER VT+
Sbjct: 94 IGKCGMTLRLIVPASQCGSLIGKGGNKIKEIREATGAQIQVASDVLPQSTERAVTLTGTR 153
Query: 97 D 97
D
Sbjct: 154 D 154
>gi|328723973|ref|XP_003247998.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 3 [Acyrthosiphon pisum]
gi|328723975|ref|XP_003247999.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 4 [Acyrthosiphon pisum]
Length = 553
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 185/428 (43%), Gaps = 77/428 (17%)
Query: 38 IGPEDTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYS 94
IG T + R L +G+IIGRGG ++Q+ T++++ + + GS E+ +T+Y
Sbjct: 141 IGNRQTEFPLRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNVGSLEKAITIYG 200
Query: 95 ASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGC 153
+ TNA R I E ++ + + V K+L ++ IG
Sbjct: 201 NPENCTNAC-------------------RKILEVMQQEATNTNKSDVILKILAHNNLIGR 241
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
+IGK G ++ I SET +I + + + ++ + G + KA QI+++L
Sbjct: 242 IIGKEGNTIKRIMSETETKITV--------SSFNYERIITVKGSIENMSKAEAQISAKLR 293
Query: 214 DNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRS--- 270
+ ++ L S + G + P A GI Y G G T+
Sbjct: 294 QS---FENDLQSMAPQTVMFPG--LHPMAMMSATGIT-----YPGRGGPTSYQQFAPAPY 343
Query: 271 ----------LYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
+ A D+ F L P + +G +IG G+ I + + SGA++KV
Sbjct: 344 PPMYPSTIPPINPALAADVQETAF---LFIPNSAVGAIIGTKGSNIRSMIRFSGASVKVA 400
Query: 321 SSSTE--------GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS--- 369
S+ E GD +S++ T+ T ++ + Q +K+ RD G +
Sbjct: 401 STENEKQGVVGNAGDANSAQQASRKV---TIVGTADSQWKAQGMIFDKL-RDEGFVPNNE 456
Query: 370 ---FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
T +LVP+S++G +IG+GGS + E++R+T + I+ LP + +ED V I G
Sbjct: 457 EVRLTVEILVPSSQVGRIIGRGGSNVRELQRVTGSIIK-LPTQGSTD-GTEDTTTVHIIG 514
Query: 427 DLDLAKDA 434
+ A
Sbjct: 515 HFLATQSA 522
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFFED 341
EF LR++ +G +IG+GG+ I QI Q++ A + V G + IT+ E+
Sbjct: 147 EFPLRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNVGSLEKAITIYGNP--EN 204
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
+A + + +Q + + D L ++L + IG +IGK G+ I + T+
Sbjct: 205 CTNACRKILEVMQQEATNTNKSDVIL-----KILAHNNLIGRIIGKEGNTIKRIMSETET 259
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
I + + + ++ + G ++ A Q+ +LR +
Sbjct: 260 KITVS--------SFNYERIITVKGSIENMSKAEAQISAKLRQSF 296
>gi|410970835|ref|XP_003991882.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Felis catus]
Length = 536
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 186/417 (44%), Gaps = 62/417 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 130 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 189
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 190 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 231
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 232 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLREAFEND 289
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P AP P+ + G +
Sbjct: 290 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPTGPRGAPPAPPYHPFATHSG-----YFS 344
Query: 270 SLYSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
SLY P ++ + L P +G +IGK GA I Q+ + +GA+IK+ +
Sbjct: 345 SLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--AP 402
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPT 378
EG D VS + ++ EA + Q R K++ ++ + + VP+
Sbjct: 403 AEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPS 455
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
S G +IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 456 STAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 508
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 362 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 420
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 421 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 465
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 466 GKTVNELQNLTSAEVIVPRDQ 486
>gi|189194345|ref|XP_001933511.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979075|gb|EDU45701.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 434
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 130/298 (43%), Gaps = 34/298 (11%)
Query: 56 SIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDA 115
+IIG+GGE V Q+R + +K + + G+ ER++TV D A
Sbjct: 139 TIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVD--------------AVSK 184
Query: 116 LFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
F + R + +E + +LL+P IG +IGK G ++ I+ + A++
Sbjct: 185 AFGLIVRTLNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAKLN- 243
Query: 176 LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN-------PSRSQHLLASAIS 228
D LP+ RS + + G A V A+ +A L + P+ SQ+ S ++
Sbjct: 244 ASDTLLPNSGERS---LIVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMA 300
Query: 229 NSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD---------L 279
+ G V P P +P GPYGG T + +
Sbjct: 301 ANVVPGGMSVQPYVPQPAGAGSPSRGPYGGPAAPTPYGAHPAAAPVAHGGAAPHAAVGAM 360
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
+ + ++ P +G +IGKGGA IN+IRQ SG+ IK++ + ++ L+T++ +
Sbjct: 361 PGQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTITGTQ 418
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IGKGG + QIR+ SGA V S + ++TVS + D +S +VR +
Sbjct: 140 IIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQV---DAVSKAFGLIVRTLNQE 196
Query: 358 SEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIR 404
+ S ++ RLL+P IG +IGK G I E++ + A +
Sbjct: 197 DLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAKLN 243
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI-LPKENLPKIASEDDEMVQISGDL 428
T ++ +P +G +IGKGG+ I E+R+L+ + I+I P +N ++ +V I+G
Sbjct: 365 LTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDN------SNERLVTITGTQ 418
Query: 429 DLAKDALIQVMTRL 442
+ + AL + +RL
Sbjct: 419 ECNQMALYMLYSRL 432
>gi|167614344|gb|ABZ89744.1| IGF-II mRNA-binding protein 2a [Danio rerio]
Length = 607
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 185/420 (44%), Gaps = 65/420 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+SK+ I + G+ E+ +T++S + +
Sbjct: 197 DFPLRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAAEKPITIHSTPEGCS 256
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A + D + E + D+ + K+L + +G +IGK G+
Sbjct: 257 T-------------ACHMIMDIMQKEAV----DTKVTEDIPLKILAHNSLVGRLIGKEGR 299
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR-- 218
++ I +T +I I + L + + + G +A +I +L +
Sbjct: 300 NLKKIEEDTETKITISSLQDL--TIYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDV 357
Query: 219 ----SQHLLASAISNSH---SSSGSLVGPTAATPIVGIAPL----MGPYGGYKGDTAGDW 267
Q L +S S S+G V P AA P GI P+ P+ G+ G
Sbjct: 358 AAINQQSNLIPGLSLSALGIFSTGLSVLPPAAGP-RGIPPVPPTGYNPFLGHSSQLGG-- 414
Query: 268 SRSLYSAP-------RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
LY P + + ++ + L P +G +IGK G I Q+ + +GA+IK+
Sbjct: 415 ---LYGVPPASGISHQHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI- 470
Query: 321 SSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLL 375
+ E D V+ + ++ EA + Q R K++ ++ + T +
Sbjct: 471 -APAESPD----VTQRMVI---ITGPPEAQFKAQGRIFGKLKEENFFTAKEEVKLETHIK 522
Query: 376 VPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEM-VQISGDLDLAKDA 434
VP+S G +IGKGG + E++ LT A + I+P++ P E+DE+ V+ISG ++ A
Sbjct: 523 VPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENDEVFVKISGHFFASQTA 578
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 35 QFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVY 93
Q PE V P + +G+IIG+ G+ +KQL + I+I P +R+V +
Sbjct: 427 QHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVII- 485
Query: 94 SASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGC 153
+ E G F ++ F + V ++ + VPS G
Sbjct: 486 TGPPEAQFKAQGRIFGKLKEENFFTAKEEV---------------KLETHIKVPSSAAGR 530
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISG 196
VIGKGG+ V +++ T A++ + +D+ +DE V+ISG
Sbjct: 531 VIGKGGKTVNELQNLTSAEVIVPRDQ----TPDENDEVFVKISG 570
>gi|26353480|dbj|BAC40370.1| unnamed protein product [Mus musculus]
Length = 579
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 198/422 (46%), Gaps = 67/422 (15%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP---LMGPYGGYKGDTAGDWSRSLY 272
S +L A+ I + ++ L PT+ P P L PY
Sbjct: 354 DIASMNLQANLIPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPY---------------- 397
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D +
Sbjct: 398 --PQFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVR 452
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGK 387
+ ++ EA + Q R KI+ ++ + + + VP+ G +IGK
Sbjct: 453 MV-------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGK 505
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLR 443
GG + E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++
Sbjct: 506 GGKTVNELQSLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVK 561
Query: 444 AN 445
+
Sbjct: 562 QH 563
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 42/186 (22%)
Query: 35 QFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTV- 92
QF +TV+ ++ P +G+IIG+ G+ +KQL + I+I P ++ R+V +
Sbjct: 399 QFEQSETETVHLFI-PALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIIT 457
Query: 93 ------YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+ A + FVSP ++ + H RV
Sbjct: 458 GPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRV----------------------- 494
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKAL 205
PS G VIGKGG+ V ++S + A++ + +D+ +D+ +V+I+G
Sbjct: 495 PSFAAGRVIGKGGKTVNELQSLSSAEVVVPRDQ----TPDENDQVVVKITGHFYA----- 545
Query: 206 CQIASR 211
CQ+A R
Sbjct: 546 CQVAQR 551
>gi|363808250|ref|NP_001242748.1| uncharacterized protein LOC100819415 [Glycine max]
gi|255637181|gb|ACU18921.1| unknown [Glycine max]
Length = 318
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVI-AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
+A E+ D + PA D L +VH +V+ + D S G V +LLV Q G +IGK
Sbjct: 2 VSAKEEPDCSIPPAVDVLLRVHKQVVNVDPHPADSASGAGRPVVTRLLVADTQAGSLIGK 61
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G +++ + TG IRIL EHLP ALR D +V+I GE+S V KA+ +A L
Sbjct: 62 QGSTIKSFQDATGCNIRILGSEHLPVFALRDDSVVEIQGESSGVHKAVELVAIHL 116
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 43/79 (54%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
TRLLV ++ G LIGK GS I + T NIRIL E+LP A DD +V+I G+
Sbjct: 45 VTRLLVADTQAGSLIGKQGSTIKSFQDATGCNIRILGSEHLPVFALRDDSVVEIQGESSG 104
Query: 431 AKDALIQVMTRLRANLFDR 449
A+ V LR L DR
Sbjct: 105 VHKAVELVAIHLRKFLVDR 123
>gi|413935392|gb|AFW69943.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 397
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 140/301 (46%), Gaps = 34/301 (11%)
Query: 31 DDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPG--SEER 88
D R ++ P +V+R + P K+G IIGR G+ +K+L +T++++R+ + G + R
Sbjct: 86 DARPRWPGWPGASVFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSR 145
Query: 89 VVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA------ 142
+V V SA +E A +SPA +A K+ + E D +SDG A
Sbjct: 146 IVLV-SAREEVEAE------LSPAMNAAIKIFKHINEIE---DINSDGTLMAPAPEISSV 195
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
+LLVP Q VIGK G +++I+ TG+ +RI+ ++ L S + +V+I+G + V
Sbjct: 196 RLLVPFAQALHVIGKQGVTIKSIQESTGSTVRIMDEDELLSHETMGERIVEINGASLEVL 255
Query: 203 KALCQIASRLHDN--PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP-LMGPYGGY 259
AL + L HL S P + + G P PY
Sbjct: 256 NALKLVLGLLRKFLVDHGVLHLFERKNPEVAQPQQSRGNPKGSRFLYGHDPSFHAPY--- 312
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
SR L S P D L +K + + P+A++G +IG G + IR SGA + +
Sbjct: 313 --------SRDL-SQPADSLITK-ITRTMQIPLADVGEIIGVRGENVELIRSVSGAVVVL 362
Query: 320 D 320
+
Sbjct: 363 E 363
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 12/181 (6%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDC---LITVSSKEFFEDT 342
RLV P +GG+IG+ G I ++ E+ A ++V + GD ++ VS++E E
Sbjct: 100 FRLVVPADKVGGIIGRRGDTIKRLCDETRARVRV-LDAPHGDGAFSRIVLVSAREEVEAE 158
Query: 343 LSATIEAVVRLQPRCSE--KIERDSGLIS-----FTTRLLVPTSRIGCLIGKGGSIITEM 395
LS + A +++ +E I D L++ + RLLVP ++ +IGK G I +
Sbjct: 159 LSPAMNAAIKIFKHINEIEDINSDGTLMAPAPEISSVRLLVPFAQALHVIGKQGVTIKSI 218
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVST 455
+ T + +RI+ ++ L + + +V+I+G +AL V+ LR L D G +
Sbjct: 219 QESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKLVLGLLRKFLVDH-GVLHL 277
Query: 456 F 456
F
Sbjct: 278 F 278
>gi|321455006|gb|EFX66153.1| hypothetical protein DAPPUDRAFT_2216 [Daphnia pulex]
Length = 388
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 198/437 (45%), Gaps = 79/437 (18%)
Query: 39 GPE---DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI--GETVPGSEERVVTVY 93
GP+ D R L +G+IIGR G ++Q+ T++++ + E V GS E+ +T+Y
Sbjct: 4 GPQRQPDFPLRVLVASEMVGAIIGRQGGTIRQITQQTRARVDVHRKENV-GSLEKAITIY 62
Query: 94 SASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIG 152
+ TNA R + E ++ + D+ +++ K+L ++ IG
Sbjct: 63 GNPENCTNAC-------------------RRVLEVMQQEADNTNKGEISLKILAHNNLIG 103
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+IGKGG ++ + ET +I + + S + + ++ I G
Sbjct: 104 RIIGKGGSTIKRVMLETETKITVSSLNDVSSFNM--ERVITIKGTI-------------- 147
Query: 213 HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL-------MGPYGGYKGDTAG 265
DN SR++ ++++ + S+ S + P + G+ P+ MG +G T
Sbjct: 148 -DNMSRAEGMISAKLRQSYESDLQAMAPQSMM-FPGLHPMAMMSTVGMGFSPSVRG-TPP 204
Query: 266 DWSRSLY---SAPRDDLSSK---EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+ +Y +AP E S L P + +G +IG G+ I I + SGA++K+
Sbjct: 205 AAAPGMYPPGAAPYAQAGPAGVGETSF-LYIPNSAVGAIIGTRGSHIRNIIRFSGASVKI 263
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL------ISFTTR 373
+S EG T + + T+ T EA + Q EK+ R+ G + T
Sbjct: 264 -TSLPEGT----TAEPQAERKVTIVGTPEAQWKAQYLIFEKM-REEGFMPAGEDVRLTVE 317
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
LLV +S++G +IGKGG + EM+R T + I+ LP++ ++ ++ V I G+ +
Sbjct: 318 LLVASSQVGRIIGKGGQNVREMQRTTSSVIK-LPEQGA---STGEETTVHIIGNFFAVQS 373
Query: 434 ALIQVMTRLRANLFDRE 450
A R+RA + ++
Sbjct: 374 A----QRRIRAMMSQQQ 386
>gi|395839829|ref|XP_003792778.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Otolemur garnettii]
Length = 575
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 184/414 (44%), Gaps = 63/414 (15%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
DH ++ + G + + I D R L P + +G+IIG+ G +K + T+S++ I
Sbjct: 173 DHSSREQGHGGSSQARQI----DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIH 228
Query: 80 -ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-G 137
+ G+ E+ VT+++ + T+ +A R+I E ++ + D
Sbjct: 229 RKENSGAAEKPVTIHATPEGTS-------------EAC-----RMILEIMQKEADETKLA 270
Query: 138 HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGE 197
++ K+L + +G +IGK G+ ++ I ETG +I I + L + + + G
Sbjct: 271 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGT 328
Query: 198 ASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGI----APLM 253
A +I +L + + +LA + +L+ P +GI ++
Sbjct: 329 VEACANAEIEIMKKLRE--AFENDMLAV------NQQANLI-PGLNLSALGIFSTGLSVL 379
Query: 254 GPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQES 313
P G +G P ++ + L P +G +IGK GA I Q+ + +
Sbjct: 380 PPPSGPRGAPPAAPYHPFAQYPEQEI------VNLFIPTQAVGAIIGKKGAHIKQLARFA 433
Query: 314 GAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----I 368
GA+IK+ + EG D VS + ++ EA + Q R K++ ++ +
Sbjct: 434 GASIKI--APAEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEV 484
Query: 369 SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+ VP+S G +IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 485 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 534
>gi|413935391|gb|AFW69942.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 468
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 140/301 (46%), Gaps = 34/301 (11%)
Query: 31 DDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPG--SEER 88
D R ++ P +V+R + P K+G IIGR G+ +K+L +T++++R+ + G + R
Sbjct: 86 DARPRWPGWPGASVFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSR 145
Query: 89 VVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA------ 142
+V V SA +E A +SPA +A K+ + E D +SDG A
Sbjct: 146 IVLV-SAREEVEAE------LSPAMNAAIKIFKHINEIE---DINSDGTLMAPAPEISSV 195
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
+LLVP Q VIGK G +++I+ TG+ +RI+ ++ L S + +V+I+G + V
Sbjct: 196 RLLVPFAQALHVIGKQGVTIKSIQESTGSTVRIMDEDELLSHETMGERIVEINGASLEVL 255
Query: 203 KALCQIASRLHDN--PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP-LMGPYGGY 259
AL + L HL S P + + G P PY
Sbjct: 256 NALKLVLGLLRKFLVDHGVLHLFERKNPEVAQPQQSRGNPKGSRFLYGHDPSFHAPY--- 312
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
SR L S P D L +K + + P+A++G +IG G + IR SGA + +
Sbjct: 313 --------SRDL-SQPADSLITK-ITRTMQIPLADVGEIIGVRGENVELIRSVSGAVVVL 362
Query: 320 D 320
+
Sbjct: 363 E 363
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 12/181 (6%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDC---LITVSSKEFFEDT 342
RLV P +GG+IG+ G I ++ E+ A ++V + GD ++ VS++E E
Sbjct: 100 FRLVVPADKVGGIIGRRGDTIKRLCDETRARVRV-LDAPHGDGAFSRIVLVSAREEVEAE 158
Query: 343 LSATIEAVVRLQPRCSE--KIERDSGLIS-----FTTRLLVPTSRIGCLIGKGGSIITEM 395
LS + A +++ +E I D L++ + RLLVP ++ +IGK G I +
Sbjct: 159 LSPAMNAAIKIFKHINEIEDINSDGTLMAPAPEISSVRLLVPFAQALHVIGKQGVTIKSI 218
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVST 455
+ T + +RI+ ++ L + + +V+I+G +AL V+ LR L D G +
Sbjct: 219 QESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKLVLGLLRKFLVDH-GVLHL 277
Query: 456 F 456
F
Sbjct: 278 F 278
>gi|195972875|ref|NP_001108030.2| insulin-like growth factor 2 mRNA-binding protein 2 [Danio rerio]
gi|124021198|gb|ABM88867.1| IGF2 mRNA-binding protein 2 [Danio rerio]
Length = 607
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 185/420 (44%), Gaps = 65/420 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+SK+ I + G+ E+ +T++S + +
Sbjct: 197 DFPLRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAAEKPITIHSTPEGCS 256
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A + D + E + D+ + K+L + +G +IGK G+
Sbjct: 257 T-------------ACHMIMDIMQKEAV----DTKVTEDIPLKILAHNSLVGRLIGKEGR 299
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR-- 218
++ I +T +I I + L + + + G +A +I +L +
Sbjct: 300 NLKKIEEDTETKITISSLQDL--TIYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDV 357
Query: 219 ----SQHLLASAISNSH---SSSGSLVGPTAATPIVGIAPL----MGPYGGYKGDTAGDW 267
Q L +S S S+G V P AA P GI P+ P+ G+ G
Sbjct: 358 AAINQQSNLIPGLSLSALGIFSTGLSVLPPAAGP-RGIPPVPPTGYNPFLGHSSQLGG-- 414
Query: 268 SRSLYSAP-------RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
LY P + + ++ + L P +G +IGK G I Q+ + +GA+IK+
Sbjct: 415 ---LYGVPPASGISHQHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI- 470
Query: 321 SSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLL 375
+ E D V+ + ++ EA + Q R K++ ++ + T +
Sbjct: 471 -APAESPD----VTQRMVI---ITGPPEAQFKAQGRIFGKLKEENFFTAKEEVKLETHIK 522
Query: 376 VPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEM-VQISGDLDLAKDA 434
VP+S G +IGKGG + E++ LT A + I+P++ P E+DE+ V+ISG ++ A
Sbjct: 523 VPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENDEVFVKISGHFFASQTA 578
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 35 QFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVY 93
Q PE V P + +G+IIG+ G+ +KQL + I+I P +R+V +
Sbjct: 427 QHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVII- 485
Query: 94 SASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGC 153
+ E G F ++ F + V ++ + VPS G
Sbjct: 486 TGPPEAQFKAQGRIFGKLKEENFFTAKEEV---------------KLETHIKVPSSAAGR 530
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISG 196
VIGKGG+ V +++ T A++ + +D+ +DE V+ISG
Sbjct: 531 VIGKGGKTVNELQNLTSAEVIVPRDQ----TPDENDEVFVKISG 570
>gi|74151175|dbj|BAE27710.1| unnamed protein product [Mus musculus]
Length = 579
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 197/422 (46%), Gaps = 67/422 (15%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP---LMGPYGGYKGDTAGDWSRSLY 272
S +L A I + ++ L PT+ P P L PY
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPY---------------- 397
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D +
Sbjct: 398 --PQFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVR 452
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGK 387
+ ++ EA + Q R KI+ ++ + + + VP+ G +IGK
Sbjct: 453 MV-------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGK 505
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLR 443
GG + E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++
Sbjct: 506 GGKTVNELQSLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVK 561
Query: 444 AN 445
+
Sbjct: 562 QH 563
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 42/186 (22%)
Query: 35 QFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTV- 92
QF +TV+ ++ P +G+IIG+ G+ +KQL + I+I P ++ R+V +
Sbjct: 399 QFEQSETETVHLFI-PALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIIT 457
Query: 93 ------YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+ A + FVSP ++ + H RV
Sbjct: 458 GPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRV----------------------- 494
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKAL 205
PS G VIGKGG+ V ++S + A++ + +D+ +D+ +V+I+G
Sbjct: 495 PSFAAGRVIGKGGKTVNELQSLSSAEVVVPRDQ----TPDENDQVVVKITGHFYA----- 545
Query: 206 CQIASR 211
CQ+A R
Sbjct: 546 CQVAQR 551
>gi|432931637|ref|XP_004081712.1| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Oryzias
latipes]
Length = 321
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 142/301 (47%), Gaps = 37/301 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDTI------ 70
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ +
Sbjct: 71 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 125
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL--- 222
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + +
Sbjct: 126 RESTGAQVQVAGD-MLPNSTERA---VTISGTPEAIIQCVKQICVVMLESPPKGATIPYR 181
Query: 223 ---LASAISNSHSSSGSLVG------PTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
++ + S + ++ G P T + +A P+ ++ +
Sbjct: 182 PKPASTPVIFSGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPF--------TPLGQTTPA 233
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
P D + + L P IG +IG+ G IN+IRQ SGA IK+ ++ + IT+
Sbjct: 234 FPGLDAAPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITI 293
Query: 334 S 334
+
Sbjct: 294 T 294
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 71/222 (31%)
Query: 133 DSDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R
Sbjct: 7 QSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER--- 59
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 60 IVTITGPTDTIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV--- 100
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
+LRLV P + G +IGKGG+ I ++R
Sbjct: 101 ----------------------------------TLRLVVPASQCGSLIGKGGSKIKEMR 126
Query: 311 QESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR 352
+ +GA ++V D L + + T+S T EA+++
Sbjct: 127 ESTGAQVQV------AGDMLPNSTERAV---TISGTPEAIIQ 159
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 34/188 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDTIFKAFA 75
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 76 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 122
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--E 450
EMR T A +++ + LP + + V ISG +A+IQ + ++ + + +
Sbjct: 123 KEMRESTGAQVQVA-GDMLP---NSTERAVTISG----TPEAIIQCVKQICVVMLESPPK 174
Query: 451 GAVSTFVP 458
GA + P
Sbjct: 175 GATIPYRP 182
>gi|241025456|ref|XP_002406183.1| poly(rc) binding protein, putative [Ixodes scapularis]
gi|215491885|gb|EEC01526.1| poly(rc) binding protein, putative [Ixodes scapularis]
Length = 398
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 141/322 (43%), Gaps = 90/322 (27%)
Query: 51 IRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFV 109
++++GSIIG+ G+ +K+ R ++ +KI I + GS ER+VTV +++
Sbjct: 1 MQEVGSIIGKKGDNIKKFREESGAKINISD---GSCPERIVTVTGSTE------------ 45
Query: 110 SPAQDALFKVHDRVIA--EELRGDEDSDGGH----QVTAKLLVPSDQIGCVIGKGGQIVQ 163
A+ K + EE+ S+G H VT +L+VP+ Q G +IGKGG ++
Sbjct: 46 -----AILKAFSLIARKFEEVSTSSHSNGSHLPKPPVTLRLIVPASQCGSLIGKGGSKIK 100
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLL 223
IR E A I++ E LP+ R+ V +SG A + K + QI + ++P
Sbjct: 101 EIR-EARASIQV-ASEMLPNSTERA---VTVSGTADAITKCIYQICCVMMESP------- 148
Query: 224 ASAISNSHSSSGSLVGPTAATPIVGIAPLMGP--YGGYKGDTAGDWSRSLYSAPRDDLSS 281
P AT P M P + G + T + Y+ P DL+
Sbjct: 149 ----------------PKGATIPYRPKPAMPPVIFAGGQAYTV----QGQYAIPHPDLTK 188
Query: 282 -KEFSLR----------------------------LVCPVANIGGVIGKGGAIINQIRQE 312
+ +L+ + P IG +IGKGG+ IN+IRQ
Sbjct: 189 LHQLALQHAPLLPGHSVGAINPQAAIATASTTTTEMTIPNDLIGCIIGKGGSKINEIRQL 248
Query: 313 SGAAIKVDSSSTEGDDCLITVS 334
SGA IK+ +S D +T+S
Sbjct: 249 SGATIKISNSEEGSKDRTVTIS 270
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 85/219 (38%), Gaps = 55/219 (25%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNA--- 101
R + P + GS+IG+GG +K++R + ++ I++ E +P S ER VTV +D
Sbjct: 80 RLIVPASQCGSLIGKGGSKIKEIR-EARASIQVASEMLPNSTERAVTVSGTADAITKCIY 138
Query: 102 ----------------------------FEDGDKFVSPAQDA-----LFKVHDRVI--AE 126
F G + Q A L K+H + A
Sbjct: 139 QICCVMMESPPKGATIPYRPKPAMPPVIFAGGQAYTVQGQYAIPHPDLTKLHQLALQHAP 198
Query: 127 ELRGDEDSDGGHQVTAKLL--------VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD 178
L G Q +P+D IGC+IGKGG + IR +GA I+I
Sbjct: 199 LLPGHSVGAINPQAAIATASTTTTEMTIPNDLIGCIIGKGGSKINEIRQLSGATIKISNS 258
Query: 179 EHLPSCALRSDELVQISG--EASVVKKALCQIASRLHDN 215
E D V ISG EA + + L + LH N
Sbjct: 259 EE-----GSKDRTVTISGTPEAINLAQYLINTSMELHKN 292
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 11/146 (7%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE--DTLSATIEAVVR 352
+G +IGK G I + R+ESGA I + S +T S++ + ++ E V
Sbjct: 4 VGSIIGKKGDNIKKFREESGAKINISDGSCPERIVTVTGSTEAILKAFSLIARKFEEVST 63
Query: 353 LQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLP 412
+ + T RL+VP S+ G LIGKGGS I E+R +A+I++ E LP
Sbjct: 64 SSHSNGSHLPKPP----VTLRLIVPASQCGSLIGKGGSKIKEIRE-ARASIQVA-SEMLP 117
Query: 413 KIASEDDEMVQISGDLDLAKDALIQV 438
+ + V +SG D + Q+
Sbjct: 118 ---NSTERAVTVSGTADAITKCIYQI 140
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 376 VPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD---LDLAK 432
+P IGC+IGKGGS I E+R+L+ A I+I E D V ISG ++LA+
Sbjct: 226 IPNDLIGCIIGKGGSKINEIRQLSGATIKISNSEE-----GSKDRTVTISGTPEAINLAQ 280
Query: 433 DALIQVMTRLRANL 446
LI L NL
Sbjct: 281 -YLINTSMELHKNL 293
>gi|147834901|emb|CAN63963.1| hypothetical protein VITISV_030144 [Vitis vinifera]
Length = 739
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 89/158 (56%), Gaps = 31/158 (19%)
Query: 285 SLRLVCPV---ANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFED 341
S R V PV A+IG VIG+GG+ I +R+ SGA ++VD + + D+CLITV+S E +D
Sbjct: 603 SARSVLPVLAAAHIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVDD 662
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
S +EAV+ L+ + +++ D ++ T RLL T+A
Sbjct: 663 LKSMAVEAVLLLRAKINDE---DDDIV--TIRLL----------------------RTRA 695
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVM 439
++RI K PK A +DE++++ G++ +DAL+Q++
Sbjct: 696 DVRIS-KSERPKCADANDELIEVVGEIGSVRDALVQII 732
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 39/155 (25%)
Query: 54 IGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQ 113
IG +IGRGG +K +R + + + + +T +E ++TV S E D S A
Sbjct: 616 IGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTST-------ESVDDLKSMAV 668
Query: 114 DALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQI 173
+A+ + ++ DED D VT +LL T A +
Sbjct: 669 EAVLLLRAKI------NDEDDD---IVTIRLL----------------------RTRADV 697
Query: 174 RILKDEHLPSCALRSDELVQISGEASVVKKALCQI 208
RI K E P CA +DEL+++ GE V+ AL QI
Sbjct: 698 RISKSER-PKCADANDELIEVVGEIGSVRDALVQI 731
>gi|225543383|ref|NP_076159.3| insulin-like growth factor 2 mRNA-binding protein 3 [Mus musculus]
gi|81916748|sp|Q9CPN8.1|IF2B3_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3;
Short=mIMP-3; AltName: Full=IGF-II mRNA-binding protein
3; AltName: Full=VICKZ family member 3
gi|11933384|dbj|BAB19755.1| igf2 mRNA-binding protein 3 [Mus musculus]
gi|12847973|dbj|BAB27779.1| unnamed protein product [Mus musculus]
gi|28175449|gb|AAH45138.1| Insulin-like growth factor 2 mRNA binding protein 3 [Mus musculus]
gi|29145081|gb|AAH49082.1| Insulin-like growth factor 2 mRNA binding protein 3 [Mus musculus]
gi|148666183|gb|EDK98599.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_b
[Mus musculus]
Length = 579
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 197/422 (46%), Gaps = 67/422 (15%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP---LMGPYGGYKGDTAGDWSRSLY 272
S +L A I + ++ L PT+ P P L PY
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPY---------------- 397
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D +
Sbjct: 398 --PQFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVR 452
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGK 387
+ ++ EA + Q R KI+ ++ + + + VP+ G +IGK
Sbjct: 453 MV-------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGK 505
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLR 443
GG + E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++
Sbjct: 506 GGKTVNELQSLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVK 561
Query: 444 AN 445
+
Sbjct: 562 QH 563
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 42/186 (22%)
Query: 35 QFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTV- 92
QF +TV+ ++ P +G+IIG+ G+ +KQL + I+I P ++ R+V +
Sbjct: 399 QFEQSETETVHLFI-PALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIIT 457
Query: 93 ------YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+ A + FVSP ++ + H RV
Sbjct: 458 GPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRV----------------------- 494
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKAL 205
PS G VIGKGG+ V ++S + A++ + +D+ +D+ +V+I+G
Sbjct: 495 PSFAAGRVIGKGGKTVNELQSLSSAEVVVPRDQ----TPDENDQVVVKITGHFYA----- 545
Query: 206 CQIASR 211
CQ+A R
Sbjct: 546 CQVAQR 551
>gi|339258170|ref|XP_003369271.1| putative KH domain protein [Trichinella spiralis]
gi|316966532|gb|EFV51093.1| putative KH domain protein [Trichinella spiralis]
Length = 640
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 159/362 (43%), Gaps = 91/362 (25%)
Query: 9 GKRSHSQTDYAD---HGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
GK + + Y D H KRR +G + GPE R L + G++IG+GGE +
Sbjct: 254 GKMNGMKRYYQDESLHYSRKRRRSGHE------GPE---LRLLIASKSAGAVIGKGGENI 304
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIA 125
K+LR + + I ++ + ERV+ + A+ V+ D + + R+
Sbjct: 305 KRLRSQYCASVNIPDS--STPERVLNISCAN------------VATLTDCVSDLIPRL-- 348
Query: 126 EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
D+ G + ++LV Q G +IG+ G ++ +R TGA IR+ + CA
Sbjct: 349 -----DDGKSGPQEAEVRMLVHQSQAGAIIGRAGFKIKELRDITGAGIRVYSE-----CA 398
Query: 186 -LRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAI----------------- 227
L ++ ++Q SG+ + A+ + + P + L A
Sbjct: 399 PLSTERVIQFSGDKEKIVNAIRHVKEICEETPIKGVERLYDANNYDMSYALDYGGYTTDR 458
Query: 228 ---SNS--------HSSSGSLVGPTAATP----IVGIAPLMGPYGGYKGDTAGDWSRSLY 272
SNS HSSS P A+TP + I+P+ G SLY
Sbjct: 459 NWRSNSTTRRSSGIHSSS-----PAASTPHFTGVNEISPMQA---------LGYSPMSLY 504
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
+ ++L + ++++ P G +IGKGG IN+IR+ESGA I VD + + D+ +IT
Sbjct: 505 A---ENLIA---TVQVTIPKELGGTIIGKGGERINRIREESGAQIVVDPPTPDSDERIIT 558
Query: 333 VS 334
+S
Sbjct: 559 IS 560
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 14/153 (9%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
LRL+ + G VIGKGG I ++R + A++ + SST I+ ++ D +S
Sbjct: 284 LRLLIASKSAGAVIGKGGENIKRLRSQYCASVNIPDSSTPERVLNISCANVATLTDCVSD 343
Query: 346 TIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
I PR + SG R+LV S+ G +IG+ G I E+R +T A IR+
Sbjct: 344 LI-------PRLDDG---KSGPQEAEVRMLVHQSQAGAIIGRAGFKIKELRDITGAGIRV 393
Query: 406 LPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
E P +++E ++Q SGD + +A+ V
Sbjct: 394 Y-SECAP-LSTE--RVIQFSGDKEKIVNAIRHV 422
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEAS 199
T ++ +P + G +IGKGG+ + IR E+GAQI + D P SDE ++ ISG S
Sbjct: 511 TVQVTIPKELGGTIIGKGGERINRIREESGAQIVV--DPPTPD----SDERIITISGTTS 564
Query: 200 VVK 202
+K
Sbjct: 565 QIK 567
>gi|146336943|gb|ABQ23585.1| putative KH-domain containing protein [Medicago truncatula]
Length = 334
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 135/282 (47%), Gaps = 31/282 (10%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI---GETVPGSEERVVTVYSASDET 99
T R+L GS+IG+GG + + + ++I++ E PG+ +R++ V A +E
Sbjct: 36 TYVRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNEFFPGTTDRIIMVSGAINEV 95
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+ + L K + EL ++D+D + +L+VP+ G +IGKGG
Sbjct: 96 ---------LRAVELILSK-----LLSELHSEDDNDVEPKTKVRLIVPNGSCGGIIGKGG 141
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+++ E+ A I+I ++ S ++D +V ++G + + I S+L ++P S
Sbjct: 142 ATIRSFIEESQAGIKISPQDN--SYYGQNDRIVTVTGTLDEQMRGIDLIVSKLAEDPHYS 199
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGP--YGGYKGDTAGDWSRSLYSAPRD 277
++S+ + SG+ V P + P + P Y G G ++ + ++
Sbjct: 200 H-----SMSSPFTYSGAYVSGYQGVPYTYVLPSVAPPAYNGVNYRPNGTGAK--FQNSKE 252
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D S+ S+ + +IG V+G+GG I+ I Q SGA IK+
Sbjct: 253 DRSN---SMTIGVADEHIGLVVGRGGRNISDISQTSGAKIKI 291
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 28/174 (16%)
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFED 341
K +R + + G VIGKGG+ I + +SGA I++ ++ EFF
Sbjct: 34 KPTYVRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNN-------------EFFPG 80
Query: 342 T------LSATIEAVVR-----LQPRCSEKIERDSGLISFTT--RLLVPTSRIGCLIGKG 388
T +S I V+R L SE D + T RL+VP G +IGKG
Sbjct: 81 TTDRIIMVSGAINEVLRAVELILSKLLSELHSEDDNDVEPKTKVRLIVPNGSCGGIIGKG 140
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
G+ I ++A I+I P++N ++D +V ++G LD + ++++L
Sbjct: 141 GATIRSFIEESQAGIKISPQDN--SYYGQNDRIVTVTGTLDEQMRGIDLIVSKL 192
>gi|351697348|gb|EHB00267.1| Poly(rC)-binding protein 3 [Heterocephalus glaber]
Length = 427
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 144/320 (45%), Gaps = 55/320 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 92 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 143
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 144 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 198
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLL-- 223
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + +
Sbjct: 199 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 254
Query: 224 --------------------ASAISNSHSSSGSLVGPTAATPIVGIAPL------MGPYG 257
AI + + L P+A + + L P G
Sbjct: 255 PKPASTPVIFAGGQAYTIQGQYAIPHPDPLAHGLYQPSAILQLTKLHQLAMQQTPFPPLG 314
Query: 258 ----GYKGD-----TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQ 308
+ G+ ++ + + +P D S + L P IG +IG+ G IN+
Sbjct: 315 QTNPAFPGEKLPLHSSEEAQNLMGQSPGLDASPPASTHELTIPNDLIGCIIGRQGTKINE 374
Query: 309 IRQESGAAIKVDSSSTEGDD 328
IRQ SGA IK+ +++TEG
Sbjct: 375 IRQMSGAQIKI-ANATEGSS 393
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 81 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 133
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 134 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 173
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 174 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 200
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 201 STGAQVQV 208
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 89 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 136
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 137 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 196
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 197 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 248
Query: 452 AVSTFVP 458
A + P
Sbjct: 249 ATIPYRP 255
>gi|115482006|ref|NP_001064596.1| Os10g0414700 [Oryza sativa Japonica Group]
gi|78708635|gb|ABB47610.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113639205|dbj|BAF26510.1| Os10g0414700 [Oryza sativa Japonica Group]
gi|215693240|dbj|BAG88622.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222612825|gb|EEE50957.1| hypothetical protein OsJ_31513 [Oryza sativa Japonica Group]
Length = 586
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 97/183 (53%), Gaps = 13/183 (7%)
Query: 30 GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERV 89
G++RD P +V+R L P K+G++IG GE +++L +TK+ +R+ + ER
Sbjct: 48 GENRDPG--WPGTSVFRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERA 105
Query: 90 VTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSD 149
V ++ A E D+ PA DAL +V++ +I ++ D + V A++L PS+
Sbjct: 106 VIIF-------AKEQPDEPKPPAIDALLRVYECIINDD---GLDVRYNNIVVARILTPSE 155
Query: 150 QIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA 209
Q +IG G ++ I+ + I ++ D LP AL D +++I G + V +AL +A
Sbjct: 156 QAASLIGDQGSVINYIKKASKTNIHVI-DGDLPPVALEDDMIIEIWGLPARVHQALELVA 214
Query: 210 SRL 212
L
Sbjct: 215 CHL 217
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 15/180 (8%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
R++ P +G VIG G + ++ +E+ A ++V + + + +KE ++
Sbjct: 61 FRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERAVIIFAKEQPDEPKPP 120
Query: 346 TIEAVVRLQPRCSEKIERDSGL-ISFTT----RLLVPTSRIGCLIGKGGSIITEMRRLTK 400
I+A++R+ E I D GL + + R+L P+ + LIG GS+I +++ +K
Sbjct: 121 AIDALLRVY----ECIINDDGLDVRYNNIVVARILTPSEQAASLIGDQGSVINYIKKASK 176
Query: 401 ANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
NI ++ +LP +A EDD +++I G AL V LR L R + +P+F
Sbjct: 177 TNIHVI-DGDLPPVALEDDMIIEIWGLPARVHQALELVACHLRKYLVHR-----SVIPLF 230
>gi|157114471|ref|XP_001652287.1| igf2 mRNA binding protein, putative [Aedes aegypti]
gi|108877277|gb|EAT41502.1| AAEL006876-PA [Aedes aegypti]
Length = 541
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 182/412 (44%), Gaps = 43/412 (10%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE-T 99
D R L +G+IIGR G ++Q+ ++++++ + + GS E+ +T+Y + T
Sbjct: 126 DFPLRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRKDNVGSLEKAITIYGNPENCT 185
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A + I E ++ + ++ ++ K+L ++ IG +IGK G
Sbjct: 186 SAC-------------------KRILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKSG 226
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
++ I +T +I + + S L + ++ + G + + QI+++L +
Sbjct: 227 NTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGSIDNMSRGESQISAKLRQSYEND 284
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAP-LMGPYGGYKGDTAGDWSRSLYSAPRDD 278
LA S + P A G G G Y G + +
Sbjct: 285 LQALAP-----QSIMFPGLHPMAMMSTAGNGMGFTGRTGMYPGTSYPMYQPPTVPGAPPG 339
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
S + + L P +G +IG G+ I I + SGA++K+ + E D L + ++
Sbjct: 340 SSDVQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSGASVKI--APLEADKPLEQQTERKV 397
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCLIGKGGSII 392
T+ T EA + Q EK+ R+ G +S T +LVP++++G +IGKGG +
Sbjct: 398 ---TIVGTPEAQWKAQYLIFEKM-REEGFVSGTDDVRLTVEILVPSAQVGRIIGKGGQNV 453
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRA 444
E++R+T + I+ LP E+ +++ V I G + A ++ T + A
Sbjct: 454 RELQRVTGSIIK-LP-EHTTNTPVDEETTVHIIGPFFSVQSAQRRIRTMMLA 503
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 29/184 (15%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 344 QETTYLYI-PNNAVGAIIGTKGSHIRNIIRFSGASVKIAPLEADKPLEQQTERKVTIVGT 402
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV--TAKLLVPSDQIGC 153
+ A +K +I E++R + G V T ++LVPS Q+G
Sbjct: 403 PE-----------------AQWKAQ-YLIFEKMREEGFVSGTDDVRLTVEILVPSAQVGR 444
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIAS-RL 212
+IGKGGQ V+ ++ TG+ I++ EH + + + V I G V+ A +I + L
Sbjct: 445 IIGKGGQNVRELQRVTGSIIKL--PEHTTNTPVDEETTVHIIGPFFSVQSAQRRIRTMML 502
Query: 213 HDNP 216
NP
Sbjct: 503 ATNP 506
>gi|431908994|gb|ELK12585.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Pteropus
alecto]
Length = 613
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 185/406 (45%), Gaps = 64/406 (15%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S+ ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 455
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 456 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 509
Query: 391 I-------ITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
+ E++ L+ A + ++P++ P E+D+ +V+I+G
Sbjct: 510 TASTSAKPVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHF 551
>gi|238836388|gb|ACR61402.1| IGF-II mRNA-binding protein 2a variant C [Danio rerio]
Length = 453
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 185/420 (44%), Gaps = 65/420 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+SK+ I + G+ E+ +T++S + +
Sbjct: 43 DFPLRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAAEKPITIHSTPEGCS 102
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A + D + E + D+ + K+L + +G +IGK G+
Sbjct: 103 T-------------ACHMIMDIMQKEAV----DTKVTEDIPLKILAHNSLVGRLIGKEGR 145
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR-- 218
++ I +T +I I + L + + + G +A +I +L +
Sbjct: 146 NLKKIEEDTETKITISSLQDL--TIYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDV 203
Query: 219 ----SQHLLASAISNSH---SSSGSLVGPTAATPIVGIAPL----MGPYGGYKGDTAGDW 267
Q L +S S S+G V P AA P GI P+ P+ G+ G
Sbjct: 204 AAINQQSNLIPGLSLSALGIFSTGLSVLPPAAGP-RGIPPVPPTGYNPFLGHSSQLGG-- 260
Query: 268 SRSLYSAP-------RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
LY P + + ++ + L P +G +IGK G I Q+ + +GA+IK+
Sbjct: 261 ---LYGVPPASGISHQHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI- 316
Query: 321 SSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLL 375
+ E D V+ + ++ EA + Q R K++ ++ + T +
Sbjct: 317 -APAESPD----VTQRMVI---ITGPPEAQFKAQGRIFGKLKEENFFTAKEEVKLETHIK 368
Query: 376 VPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEM-VQISGDLDLAKDA 434
VP+S G +IGKGG + E++ LT A + I+P++ P E+DE+ V+ISG ++ A
Sbjct: 369 VPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENDEVFVKISGHFFASQTA 424
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 35 QFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVY 93
Q PE V P + +G+IIG+ G+ +KQL + I+I P +R+V +
Sbjct: 273 QHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMV-II 331
Query: 94 SASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGC 153
+ E G F ++ F + V ++ + VPS G
Sbjct: 332 TGPPEAQFKAQGRIFGKLKEENFFTAKEEV---------------KLETHIKVPSSAAGR 376
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISG 196
VIGKGG+ V +++ T A++ + +D+ +DE V+ISG
Sbjct: 377 VIGKGGKTVNELQNLTSAEVIVPRDQ----TPDENDEVFVKISG 416
>gi|198465289|ref|XP_001353580.2| GA20351 [Drosophila pseudoobscura pseudoobscura]
gi|198150092|gb|EAL31093.2| GA20351 [Drosophila pseudoobscura pseudoobscura]
Length = 330
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 130/282 (46%), Gaps = 55/282 (19%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIV + R ++ +KI I + + P ER+VTV S TNA ++
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTV---SGTTNAIFSAFTLIT 86
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+ + D G Q+ +L+VP+ Q G +IGK G ++ IR TG
Sbjct: 87 KKFEEWCSQFN---------DAGKIGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA---------SRLHDNPSRSQH 221
I++ E LP+ R+ V +SG A + + + QI S + NP S
Sbjct: 138 CSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESCPRSTVAKNPLASLA 193
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSS 281
L A N S+ G + TAA +A L AG R+ +A R
Sbjct: 194 ALGLAGMNPASTGG--INHTAA-----LAAL-----------AGSQLRTANAANRAQQQQ 235
Query: 282 KEFSLRLVCPVAN--IGGVIGKGGAIINQIRQESGAAIKVDS 321
E + V+N IG +IGKGG I +IRQ SGA I++ +
Sbjct: 236 HEMT------VSNDLIGCIIGKGGTKIAEIRQISGAMIRISN 271
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 13/161 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S ++ ++ F
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIF- 79
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFT---TRLLVPTSRIGCLIGKGGSIITEMRR 397
SA + + CS+ D+G I T RL+VP S+ G LIGK GS I E+R+
Sbjct: 80 ---SAFTLITKKFEEWCSQF--NDAGKIGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
T +I++ E LP + + V +SG + + Q+
Sbjct: 135 TTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 128/348 (36%), Gaps = 106/348 (30%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV R E+GA+I I D P + +V +SG +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTN 76
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ A I +
Sbjct: 77 AIFSAFTLITKKFE---------------------------------------------- 90
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+W A + + + +RL+ P + G +IGK G+ I +IRQ +G +I+V
Sbjct: 91 ------EWCSQFNDAGK--IGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQV 142
Query: 320 DS----SSTE------GDDCLITVSSKEFFEDTLSATIEAVV--------------RLQP 355
S +STE G IT + L + + V + P
Sbjct: 143 ASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESCPRSTVAKNPLASLAALGLAGMNP 202
Query: 356 RCSEKIERDSGLISFT-----------------TRLLVPTSRIGCLIGKGGSIITEMRRL 398
+ I + L + + V IGC+IGKGG+ I E+R++
Sbjct: 203 ASTGGINHTAALAALAGSQLRTANAANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQI 262
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
+ A IRI E + D + ISG+ D AL Q + +R ++
Sbjct: 263 SGAMIRISNCEE--REGGNTDRTITISGNPDSV--ALAQYLINMRISM 306
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 85/206 (41%), Gaps = 34/206 (16%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSAS 96
IG R + P + GS+IG+ G +K++R T I++ E +P S ER VT+ ++
Sbjct: 102 IGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 161
Query: 97 DETN---------AFEDGDK-----------------FVSPAQDALFKVHDRVIA----E 126
++ E + ++PA H +A
Sbjct: 162 EQITQCIYQICLVMLESCPRSTVAKNPLASLAALGLAGMNPASTGGIN-HTAALAALAGS 220
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
+LR ++ Q ++ V +D IGC+IGKGG + IR +GA IRI E
Sbjct: 221 QLRTANAANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERE--GG 278
Query: 187 RSDELVQISGEASVVKKALCQIASRL 212
+D + ISG V A I R+
Sbjct: 279 NTDRTITISGNPDSVALAQYLINMRI 304
>gi|18858571|ref|NP_571566.1| insulin-like growth factor 2 mRNA-binding protein 3 [Danio rerio]
gi|82248267|sp|Q9PW80.1|IF2B3_DANRE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3; AltName:
Full=Decapentaplegic and Vg-related 1 RNA-binding
protein; AltName: Full=IGF-II mRNA-binding protein 3;
AltName: Full=VICKZ family member 3; AltName: Full=Vg1
RNA-binding protein; Short=Vg1-RBP
gi|5596632|gb|AAD45610.1|AF161270_1 Vg1 RNA binding protein [Danio rerio]
gi|28278436|gb|AAH45873.1| Insulin-like growth factor 2 mRNA binding protein 3 [Danio rerio]
gi|182889884|gb|AAI65768.1| Igf2bp3 protein [Danio rerio]
Length = 582
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 189/421 (44%), Gaps = 69/421 (16%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T SKI I + G+ E+ +TV+S + +
Sbjct: 194 DVPLRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITVHSTPEGCS 253
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDE-DSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+ R I E ++ + D+ ++ K+L ++ +G +IGK G
Sbjct: 254 S------------------ACRNIMEIMQKEAIDTKITEEIPLKILAHNNFVGRLIGKEG 295
Query: 160 QIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HD 214
+ ++ I +T +I I L+D L + + + G KA +I ++ ++
Sbjct: 296 RNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGTLDACAKAEEEIMKKVRESYE 351
Query: 215 NPSRSQHLLASAISNSHSSSGSLVGPTAAT----PIVGIAPLMGPYGGYKGDTAGDWSRS 270
N + HL ++ I + ++ L P AA+ P V P G GY+ A S +
Sbjct: 352 NDVAAMHLQSNLIPGLNLNALGLF-PGAASGGISPSVVSGPPPGAQAGYQSFGAQMESET 410
Query: 271 LYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCL 330
++ L P +G +IGK G I Q+ + +GA+IK+ + +G D
Sbjct: 411 VH---------------LFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APADGIDAK 453
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLI 385
+ +S EA + Q R K++ ++ + + VP+ G +I
Sbjct: 454 QRMV-------IISGPPEAQFKAQGRIFGKLKEENFFGPKEEVKLEAHIKVPSFAAGRVI 506
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL---DLAKDALIQVMTRL 442
GKGG + E++ LT A + ++P++ P D +V+I+G LA+ + ++++++
Sbjct: 507 GKGGKTVNELQNLTSAEV-VVPRDQTPD--ENDQVVVKITGHFYASQLAQRKIQEIISQV 563
Query: 443 R 443
R
Sbjct: 564 R 564
>gi|348518109|ref|XP_003446574.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 349
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 141/316 (44%), Gaps = 45/316 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R D+ ++I I E ER+VT+ +D
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREDSGARINISEG--NCPERIVTITGPTDAI------ 70
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ +
Sbjct: 71 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 125
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS-------R 218
R TGAQ+++ D LP+ R+ V ISG + + + QI L ++P R
Sbjct: 126 RESTGAQVQVAGD-MLPNSTERA---VTISGAPEAIIQCVKQICVVLLESPPKGATIPYR 181
Query: 219 SQHLLASAISNSHSSSGSLVGPTAAT--------PIVGIAPLMGPYGGYKGDTAGDWSRS 270
+ I + +G + A P+ + G Y D + +
Sbjct: 182 PKPASTPVIFSGGQVRADPLGASTANLSLLLQHQPLPAYT-IQGQYAIPHPDLSKLHQLA 240
Query: 271 LYSAPRD------------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIK 318
+ P D S++ + L P IG +IG+ G IN+IRQ SGA IK
Sbjct: 241 MQQTPFTPLGQTTPAFPGLDASNQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 300
Query: 319 VDSSSTEGDDCLITVS 334
+ ++ + IT++
Sbjct: 301 IANAMEGSSERQITIT 316
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R++SGA I + +EG+ C + T+
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINI----SEGN-CPERIV-------TI 63
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 64 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 123
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
EMR T A +++ + LP + + V ISG A +A+IQ + ++ L + +G
Sbjct: 124 EMRESTGAQVQVA-GDMLP---NSTERAVTISG----APEAIIQCVKQICVVLLESPPKG 175
Query: 452 AVSTFVP 458
A + P
Sbjct: 176 ATIPYRP 182
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 83/189 (43%), Gaps = 62/189 (32%)
Query: 133 DSDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
S+GG VT +LL+ ++G +IGK G+ V+ +R ++GA+I I + +C R
Sbjct: 7 QSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISEG----NCPER--- 59
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 60 IVTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV--- 100
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
+LRLV P + G +IGKGG+ I ++R
Sbjct: 101 ----------------------------------TLRLVVPASQCGSLIGKGGSKIKEMR 126
Query: 311 QESGAAIKV 319
+ +GA ++V
Sbjct: 127 ESTGAQVQV 135
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 135 DGGHQV-TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D +Q T +L +P+D IGC+IG+ G + IR +GAQI+I + S+ +
Sbjct: 260 DASNQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-----AMEGSSERQIT 314
Query: 194 ISGEASVVKKALCQIASRLHD 214
I+G + + A I +R D
Sbjct: 315 ITGTPANISLAQYLINARFRD 335
>gi|260829253|ref|XP_002609576.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
gi|229294938|gb|EEN65586.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
Length = 408
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 134/299 (44%), Gaps = 47/299 (15%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET-NAFED-GDKFV 109
+ +GSIIG+ G+ +K+ R ++ ++I I + S ER+VT+ +++ AF G KF
Sbjct: 29 KDVGSIIGKKGDTIKRFREESGARINISDG--SSPERIVTITGSTENILKAFNMIGKKF- 85
Query: 110 SPAQDALFKVHDRVIAEELRGDEDSDGGH--------QVTAKLLVPSDQIGCVIGKGGQI 161
+ED H VT +L+VP+ Q G +IGKGG
Sbjct: 86 ---------------------EEDMKAAHVNSSVPVPPVTLRLIVPASQCGSLIGKGGSK 124
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
++ IR TGA I++ D LP+ R+ V +SG + + + I + ++P +
Sbjct: 125 IKEIREVTGASIQVAGD-MLPNSTERA---VTVSGTPDAISQCVYHICCVMLESPPKGAT 180
Query: 222 L-LASAISNSHSSSGSLV-GPTAATPIVGIA----PLMGPYGGYKGDTAGDWSRSLYSAP 275
+ ++ S+SG +V T + +A P + P A + S P
Sbjct: 181 IPYKPRPASGTSTSGPVVFAGGQLTKLHQLALQQTPYITPGTTLPAALATQFGVQTASQP 240
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
+ S L P IG +IGKGG IN+IRQ SGA IK+ D +T++
Sbjct: 241 GNPSSQTH---ELTIPNELIGCIIGKGGCKINEIRQCSGATIKIAGMQEGSTDRQVTIT 296
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 79/160 (49%), Gaps = 29/160 (18%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS----- 335
S ++RL+ ++G +IGK G I + R+ESGA I + S+ IT S+
Sbjct: 17 SVTLTIRLIMQGKDVGSIIGKKGDTIKRFREESGARINISDGSSPERIVTITGSTENILK 76
Query: 336 ------KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGG 389
K+F ED +A + + V + P T RL+VP S+ G LIGKGG
Sbjct: 77 AFNMIGKKFEEDMKAAHVNSSVPVPP--------------VTLRLIVPASQCGSLIGKGG 122
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
S I E+R +T A+I++ + LP + + V +SG D
Sbjct: 123 SKIKEIREVTGASIQVA-GDMLP---NSTERAVTVSGTPD 158
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 74/176 (42%), Gaps = 46/176 (26%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDETN---- 100
R + P + GS+IG+GG +K++R T + I++ G+ +P S ER VTV D +
Sbjct: 106 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVAGDMLPNSTERAVTVSGTPDAISQCVY 165
Query: 101 -----AFEDGDKFVS------PAQDA------------LFKVHD---------------- 121
E K + PA L K+H
Sbjct: 166 HICCVMLESPPKGATIPYKPRPASGTSTSGPVVFAGGQLTKLHQLALQQTPYITPGTTLP 225
Query: 122 RVIAEELRGDEDSDGGH--QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
+A + S G+ T +L +P++ IGC+IGKGG + IR +GA I+I
Sbjct: 226 AALATQFGVQTASQPGNPSSQTHELTIPNELIGCIIGKGGCKINEIRQCSGATIKI 281
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 369 SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
S T L +P IGC+IGKGG I E+R+ + A I+I
Sbjct: 245 SQTHELTIPNELIGCIIGKGGCKINEIRQCSGATIKI 281
>gi|291400299|ref|XP_002716509.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2-like
isoform 1 [Oryctolagus cuniculus]
Length = 599
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 178/400 (44%), Gaps = 53/400 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL-----HD 214
+ ++ I ETG +I I + L + + + G A +I +L +D
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEAEIMKKLREAFEND 352
Query: 215 NPSRSQH------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWS 268
+ +Q L SA+ + L P AP P+ + G + +
Sbjct: 353 MLAVNQQANLIPGLNLSALGIFSTGLSMLPPPAGPRGAPPTAPYH-PFATHSGYFSSLYP 411
Query: 269 RSLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG
Sbjct: 412 HHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGP 469
Query: 328 DCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIG 382
D VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 470 D----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAG 522
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 523 RVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 558
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 425 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 483
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 484 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 528
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 529 GKTVNELQNLTSAEVIVPRDQ 549
>gi|357146019|ref|XP_003573848.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 470
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 153/326 (46%), Gaps = 31/326 (9%)
Query: 30 GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERV 89
G+ R ++ P +V+R + K+G +IGR GE +++L +T++++R+ + G +
Sbjct: 74 GEFRPRWPGFPGASVFRLVVAGDKVGGLIGRRGETIRRLCEETRARVRVLDPADGVAGQQ 133
Query: 90 VTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDS-----DGGHQVTAKL 144
+ + SA++ET A ++PA DA K+ V E+ G S +A+L
Sbjct: 134 IVLISATEETQAE------LAPAMDAAIKIFKHV--NEIEGINASVTFSASAPEICSARL 185
Query: 145 LVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
LVP +Q +IGK G ++++I+ TG+ IRI+ + L + + + +V+I G + A
Sbjct: 186 LVPKEQAAHLIGKQGIMIKSIQETTGSTIRIIDKDDLLNYRMVDERIVEILGASLKALNA 245
Query: 205 LCQI----------ASRLHDNPSRSQHLL-ASAISNSHSSSGSLVGPTAATPIVG----- 248
L + S LH ++Q + A IS + S P + ++
Sbjct: 246 LKSVLGLLRKFLVDHSVLHLFERKNQAIAHAQDISKENQVSNDYALPVSRDLLLSDGQSP 305
Query: 249 IAPLMGPYGGYKGD-TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
++P Y Y D + D S P + L K+ + + P+ +IG GG I
Sbjct: 306 LSPKGNRYLSYGRDPSVCDPYSSQIRHPTESL-IKKITQTMKIPLPQADEIIGVGGRNIA 364
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITV 333
IR SGA + ++ + ++ L+T+
Sbjct: 365 HIRSVSGAIVVLEETGDYLNEVLVTI 390
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 10/173 (5%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-DSSSTEGDDCLITVSSKEFFEDTLS 344
RLV +GG+IG+ G I ++ +E+ A ++V D + ++ +S+ E + L+
Sbjct: 89 FRLVVAGDKVGGLIGRRGETIRRLCEETRARVRVLDPADGVAGQQIVLISATEETQAELA 148
Query: 345 ATIEAVVRLQPRCSEKIERDSGLISFTT--------RLLVPTSRIGCLIGKGGSIITEMR 396
++A +++ +E IE + ++F+ RLLVP + LIGK G +I ++
Sbjct: 149 PAMDAAIKIFKHVNE-IEGINASVTFSASAPEICSARLLVPKEQAAHLIGKQGIMIKSIQ 207
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
T + IRI+ K++L D+ +V+I G A +AL V+ LR L D
Sbjct: 208 ETTGSTIRIIDKDDLLNYRMVDERIVEILGASLKALNALKSVLGLLRKFLVDH 260
>gi|296089737|emb|CBI39556.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 52/73 (71%)
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
L+ K G + E+ +T NI IL KENL ++AS+DDEMVQI G+L++A + L+Q+ RL+
Sbjct: 94 LLIKMGPFVYEVMSVTGVNISILSKENLSQVASKDDEMVQIIGELNVASNTLVQMTLRLK 153
Query: 444 ANLFDREGAVSTF 456
ANLF REG + F
Sbjct: 154 ANLFGREGVTTAF 166
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%)
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
K G V + S TG I IL E+L A + DE+VQI GE +V L Q+ RL N
Sbjct: 97 KMGPFVYEVMSVTGVNISILSKENLSQVASKDDEMVQIIGELNVASNTLVQMTLRLKAN 155
>gi|410911650|ref|XP_003969303.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Takifugu rubripes]
Length = 581
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 187/422 (44%), Gaps = 73/422 (17%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD-ET 99
D R L P + +G+IIG+ G+ ++ L T SKI I + G+ E+ +T++S + +
Sbjct: 194 DIPLRMLVPTQFVGAIIGKQGDTIRNLTKQTHSKIDIHRKENAGAAEKPITIHSTPEGSS 253
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDE-DSDGGHQVTAKLLVPSDQIGCVIGKG 158
NA R I E ++ + D+ ++ K+LV ++ +G +IGK
Sbjct: 254 NAC-------------------RTIMEIMQKEAIDTKFTEEIPLKILVHNNFVGRLIGKE 294
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +TG +I I + L + + + G +A ++ ++ +++
Sbjct: 295 GRNLKKIEQDTGTKITISSLQDL--TVYNPERTITVKGAIENCGRAEEEVMKKIREAYES 352
Query: 216 PSRSQHLLASAISNSHSSSGSLV--GPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
+ +L ++ I + ++ L G P + P G +GGY S
Sbjct: 353 DVAAMNLQSNLIPGLNLNALGLFPSGTPGMGPSMSSLPPPGAHGGY----------SFGG 402
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD----C 329
P + ++ L P +G +IGK G I Q+ +GA+IK+ + EG D
Sbjct: 403 NPESE------TVHLFIPTLAVGAIIGKQGQHIKQLSHFAGASIKI--APAEGMDPKHRM 454
Query: 330 LITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCL 384
+I V EA + Q R K++ ++ + + VP+ G +
Sbjct: 455 VIIVGPP-----------EAQFKAQCRIFGKLKEENFFGPKEEVKLEAHIKVPSFAAGRV 503
Query: 385 IGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL---DLAKDALIQVMTR 441
IGKGG + E++ LT A + ++P++ P +D +V+I G LA+ + +++ +
Sbjct: 504 IGKGGKTVNELQNLTCAEV-VVPRDQTPD--EKDQVIVKIIGHFFACQLAQRKIQEILAQ 560
Query: 442 LR 443
+R
Sbjct: 561 VR 562
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 39/180 (21%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS----EERVVTVYSA 95
PE P +G+IIG+ G+ +KQL + I+I P + R+V +
Sbjct: 404 PESETVHLFIPTLAVGAIIGKQGQHIKQLSHFAGASIKIA---PAEGMDPKHRMVII--- 457
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIA----EELRGDEDSDGGHQVTAKLLVPSDQI 151
V P +A FK R+ E G ++ ++ A + VPS
Sbjct: 458 -------------VGPP-EAQFKAQCRIFGKLKEENFFGPKEEV---KLEAHIKVPSFAA 500
Query: 152 GCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR 211
G VIGKGG+ V +++ T A++ + +D+ + + +V+I G CQ+A R
Sbjct: 501 GRVIGKGGKTVNELQNLTCAEVVVPRDQ---TPDEKDQVIVKIIGHFFA-----CQLAQR 552
>gi|403299426|ref|XP_003940488.1| PREDICTED: RNA-binding protein Nova-2 [Saimiri boliviensis
boliviensis]
Length = 508
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 134/300 (44%), Gaps = 51/300 (17%)
Query: 25 KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET--- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 207 KRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 258
Query: 82 VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQV 140
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 259 YPGTTERVCLVQGTAEALNAVHS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK 315
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 316 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQ 372
Query: 201 VKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYK 260
V KA+ I ++ ++P S L + S ++ GP A + G
Sbjct: 373 VHKAVSAIVQKVQEDPQSSSCL--------NISYANVAGPVANSNPTG------------ 412
Query: 261 GDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
S Y++P ++ P +G ++GKGG + + ++ +GA I++
Sbjct: 413 ---------SPYASPXXXXXXXXIAV----PENLVGAILGKGGKTLVEYQELTGARIQIS 459
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 216 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 275
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 276 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 333
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 334 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 385
>gi|193848519|gb|ACF22709.1| hypothetical protein-2 [Brachypodium distachyon]
Length = 429
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 164/333 (49%), Gaps = 40/333 (12%)
Query: 109 VSPAQDALFKVHD------RVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIV 162
+SPAQ+AL V D RV+A R E V+ +LV + + +G+G +
Sbjct: 114 LSPAQEALVSVVDVGGVLHRVVA---RAPE------FVSCLVLVEAAGLE-ALGRG--TL 161
Query: 163 QNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
+ I SET A++R+ L + PS E+++I+G+ + ++KA+ ++S L +
Sbjct: 162 EAIASETNAELRVTSLAEGATPSVH-SPKEVIEITGDRTTIRKAIVALSSYLQGD----- 215
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS 280
L A +++ S ++ + P ++ + P G + + P+D
Sbjct: 216 -LHACSLTTSVTTPSPMF-PWKSSEVP--EPNYGDLHSGVSTKCANINVPWIDCPQDVAG 271
Query: 281 S------KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
+ ++ S RL+C V GG+IGK G II E+GA+I V + + + +IT+S
Sbjct: 272 NVETENLQQISFRLLCHVNLAGGLIGKKGMIIKGFETETGASIDVGNPFSGCMERVITIS 331
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERD--SGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ E S A++ + R E++ER+ G + R+LVP S+ L+G GG+II
Sbjct: 332 ALES-PGKHSKVQSAILCIFDRM-EEVERNLMFGKPECSARVLVPKSQFSSLVGLGGAII 389
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQIS 425
EM + T A I IL + ++P AS + ++Q S
Sbjct: 390 KEMVKSTGARIEILDEMDVPACASNCERVLQAS 422
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 80/151 (52%), Gaps = 11/151 (7%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LC + G +IG+ G I+K +T + I +G G ERV+T+ +A E
Sbjct: 283 FRLLCHVNLAGGLIGKKGMIIKGFETETGASIDVGNPFSGCMERVITI-------SALES 335
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
K S Q A+ + DR+ EE+ + G + +A++LVP Q ++G GG I++
Sbjct: 336 PGKH-SKVQSAILCIFDRM--EEVERNL-MFGKPECSARVLVPKSQFSSLVGLGGAIIKE 391
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQIS 195
+ TGA+I IL + +P+CA + ++Q S
Sbjct: 392 MVKSTGARIEILDEMDVPACASNCERVLQAS 422
>gi|9957161|gb|AAG09238.1|AF176327_1 alphaCP-3 [Mus musculus]
Length = 339
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 144/307 (46%), Gaps = 42/307 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIFQCVKQICVVMLESPPKGATIPYR 179
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY-------GGYKGDT--- 263
+ + A + + ++ P T + +A P+ + G+
Sbjct: 180 PKPACTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 239
Query: 264 -AGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+ + +++L D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 240 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 298
Query: 322 SSTEGDD 328
++TEG
Sbjct: 299 NATEGSS 305
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 32/191 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 62 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+ Q + ++ + + +G
Sbjct: 122 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIFQCVKQICVVMLESPPKG 173
Query: 452 AVSTFVPVFLC 462
A + P C
Sbjct: 174 ATIPYRPKPAC 184
>gi|212723546|ref|NP_001131366.1| uncharacterized protein LOC100192689 [Zea mays]
gi|194691330|gb|ACF79749.1| unknown [Zea mays]
gi|413935393|gb|AFW69944.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 467
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 143/299 (47%), Gaps = 31/299 (10%)
Query: 31 DDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPG--SEER 88
D R ++ P +V+R + P K+G IIGR G+ +K+L +T++++R+ + G + R
Sbjct: 86 DARPRWPGWPGASVFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSR 145
Query: 89 VVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA------ 142
+V V SA +E A +SPA +A K+ + E D +SDG A
Sbjct: 146 IVLV-SAREEVEAE------LSPAMNAAIKIFKHINEIE---DINSDGTLMAPAPEISSV 195
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
+LLVP Q VIGK G +++I+ TG+ +RI+ ++ L S + +V+I+G + V
Sbjct: 196 RLLVPFAQALHVIGKQGVTIKSIQESTGSTVRIMDEDELLSHETMGERIVEINGASLEVL 255
Query: 203 KALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY-GGYKG 261
AL + L + L+ + + P A P P + G+
Sbjct: 256 NALKLVLGLLR------KFLVDHGVLHLFERK----NPEVAQPQSRGNPKGSRFLYGHDP 305
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
+SR L S P D L +K + + P+A++G +IG G + IR SGA + ++
Sbjct: 306 SFHAPYSRDL-SQPADSLITK-ITRTMQIPLADVGEIIGVRGENVELIRSVSGAVVVLE 362
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 12/181 (6%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDC---LITVSSKEFFEDT 342
RLV P +GG+IG+ G I ++ E+ A ++V + GD ++ VS++E E
Sbjct: 100 FRLVVPADKVGGIIGRRGDTIKRLCDETRARVRV-LDAPHGDGAFSRIVLVSAREEVEAE 158
Query: 343 LSATIEAVVRLQPRCSE--KIERDSGLIS-----FTTRLLVPTSRIGCLIGKGGSIITEM 395
LS + A +++ +E I D L++ + RLLVP ++ +IGK G I +
Sbjct: 159 LSPAMNAAIKIFKHINEIEDINSDGTLMAPAPEISSVRLLVPFAQALHVIGKQGVTIKSI 218
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVST 455
+ T + +RI+ ++ L + + +V+I+G +AL V+ LR L D G +
Sbjct: 219 QESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKLVLGLLRKFLVDH-GVLHL 277
Query: 456 F 456
F
Sbjct: 278 F 278
>gi|344306639|ref|XP_003421993.1| PREDICTED: poly(rC)-binding protein 3 [Loxodonta africana]
Length = 396
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 144/305 (47%), Gaps = 42/305 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 74 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 125
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 126 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 180
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 181 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 236
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY-------GGYKGDT--- 263
+ + A + + ++ P T + +A P+ + G+
Sbjct: 237 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 296
Query: 264 -AGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+ + +++L D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 297 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 355
Query: 322 SSTEG 326
++TEG
Sbjct: 356 NATEG 360
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 63 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 115
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 116 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 155
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 156 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 182
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 183 STGAQVQV 190
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 71 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 118
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 119 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 178
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 179 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 230
Query: 452 AVSTFVP 458
A + P
Sbjct: 231 ATIPYRP 237
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T +L +P+D IGC+IG+ G + IR +GAQI+I + S+ + I+G +
Sbjct: 320 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-----ATEGSSERQITITGSPAN 374
Query: 201 VKKALCQIASRL 212
+ A I +RL
Sbjct: 375 ISLAQYLINARL 386
>gi|449266969|gb|EMC77947.1| Insulin-like growth factor 2 mRNA-binding protein 2, partial
[Columba livia]
Length = 522
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 187/411 (45%), Gaps = 58/411 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNAFED 104
R L P + +G+IIG+ G +K L T+SK+ I + G+ E+ +T+++ + +
Sbjct: 118 RMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGCS---- 173
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
+A R+I + ++ + D + ++ K+L + +G +IGK G+ ++
Sbjct: 174 ---------EAC-----RMILDIMQKEADETKSAEEIPLKILAHNSLVGRLIGKEGRNLK 219
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP---- 216
I +TG +I I + L + + + G KA +I +L ++N
Sbjct: 220 KIEQDTGTKITISPLQDL--TIYNPERTITVKGSTEACSKAQVEIMKKLREAYENDVVAV 277
Query: 217 SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP- 275
++ +L+ N+ + + +TP A PY + +A + LY AP
Sbjct: 278 NQQANLIPGLNLNALGIFSTGLSMLPSTPGARGAAAATPYHPFASSSA--YLSGLYGAPP 335
Query: 276 ------RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDC 329
+ L +E + L P +G +IGK G I Q+ + +GA+IK+ + EG D
Sbjct: 336 GSAFPHQHPLPEQEV-VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI--APAEGPD- 391
Query: 330 LITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCL 384
+S+ ++ EA + Q R K++ ++ + + VP+ G +
Sbjct: 392 ----ASERMV--IITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIKVPSFAAGRV 445
Query: 385 IGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 446 IGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVKIIGHFFASQTA 492
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE V P + +G+IIG+ G+ +KQL + I+I P + ER+V + + E
Sbjct: 346 PEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVII-TGPPE 404
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 405 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIKVPSFAAGRVIGKG 449
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 450 GKTVNELQNLTSAEVIVPRDQ 470
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 77/182 (42%), Gaps = 11/182 (6%)
Query: 265 GDWSRSLYSAPRDDLSSK--EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
G SR S+P K EF LR++ P +G +IGK G I + +++ + + +
Sbjct: 94 GHSSRERGSSPGGSSQPKQLEFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRK 153
Query: 323 STEG-DDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRI 381
G + IT+ + T EA + ++ + ++L S +
Sbjct: 154 ENAGAAEKPITIHA------TPEGCSEACRMILDIMQKEADETKSAEEIPLKILAHNSLV 207
Query: 382 GCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTR 441
G LIGK G + ++ + T I I P ++L + + + G + A +++M +
Sbjct: 208 GRLIGKEGRNLKKIEQDTGTKITISPLQDL--TIYNPERTITVKGSTEACSKAQVEIMKK 265
Query: 442 LR 443
LR
Sbjct: 266 LR 267
>gi|149031922|gb|EDL86834.1| rCG50739, isoform CRA_c [Rattus norvegicus]
Length = 317
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 142/302 (47%), Gaps = 41/302 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIA------PLMGPYGGYKGDTAGDWSRSLY 272
+ SSS + T + +A P+ G+ G + Y
Sbjct: 173 GVTI---PYRPKPSSSPVIFAGGQLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGY 229
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
A D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ + D +T
Sbjct: 230 WAGLDA-SAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVT 288
Query: 333 VS 334
++
Sbjct: 289 IT 290
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|148672030|gb|EDL03977.1| poly(rC) binding protein 2, isoform CRA_d [Mus musculus]
Length = 316
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 142/308 (46%), Gaps = 54/308 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIA------PLMGPYGGYKG------DTAGD 266
+ SSS + T + +A P+ G+ G + G
Sbjct: 173 GVTI---PYRPKPSSSPVIFAGGQLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGY 229
Query: 267 WSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
W D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 230 WGL--------DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGS 281
Query: 327 DDCLITVS 334
D +T++
Sbjct: 282 TDRQVTIT 289
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|449509689|ref|XP_002192903.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Taeniopygia guttata]
Length = 531
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 184/413 (44%), Gaps = 71/413 (17%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K L T+SK+ I + G+ E+ +T+++ + +
Sbjct: 116 DFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGCS 175
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I + ++ + D + +V K+L + +G +IGK G
Sbjct: 176 -------------EAC-----RMILDIMQKEADETKSAEEVPLKILAHNSLVGRLIGKEG 217
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL-----HD 214
+ ++ I +TG +I I + L + + + G A +I +L +D
Sbjct: 218 RNLKKIEQDTGTKITISPLQDL--TIYNPERTITVKGSTEACSNAEVEIMKKLREAYEND 275
Query: 215 NPSRSQH-------------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
+ +Q + ++ +S S+ G+ G AATP A G +
Sbjct: 276 VVAVNQQANLIPGLNLSALGIFSTGLSMLPSTPGAR-GAAAATPYHPFA----QQSGRRR 330
Query: 262 DTAGDWSRSLYSAP-------RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
+ + SLY AP + L +E + L P +G +IGK G I Q+ + +G
Sbjct: 331 TGSSAYLSSLYGAPPAGAFPHQHPLPEQEV-VNLFIPTQAVGAIIGKKGQHIKQLARFAG 389
Query: 315 AAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----IS 369
A+IK+ + EG D +S+ ++ EA + Q R K++ ++ +
Sbjct: 390 ASIKI--APAEGPD-----ASERMV--IITGPPEAQFKAQGRIFGKLKEENFFNPKEEVK 440
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+ VP+ G +IGKGG + E++ LT A + I+P++ P E++E+V
Sbjct: 441 LEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVV 489
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE V P + +G+IIG+ G+ +KQL + I+I P + ER+V + + E
Sbjct: 356 PEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVII-TGPPE 414
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 415 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIKVPSFAAGRVIGKG 459
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 460 GKTVNELQNLTSAEVIVPRDQ 480
>gi|327260862|ref|XP_003215252.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 339
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 144/307 (46%), Gaps = 42/307 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 179
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG-------GYKGDT--- 263
+ + A + + ++ P T + +A P+ + G+
Sbjct: 180 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGEKLPL 239
Query: 264 -AGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+ + +++L D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 240 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 298
Query: 322 SSTEGDD 328
++TEG
Sbjct: 299 NATEGSS 305
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + +++SNS ++S V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-------IINSMSNSTATSKPPV------------- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 42/192 (21%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD--DCLITVS------- 334
++RL+ +G +IGK G + ++R+ESGA I + +EG+ + ++T++
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIF 69
Query: 335 ------SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKG 388
+ +F ED +++ + +P T RL+VP S+ G LIGKG
Sbjct: 70 KAFAMIAYKFEEDIINSMSNSTATSKP-------------PVTLRLVVPASQCGSLIGKG 116
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
GS I E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 117 GSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLE 168
Query: 449 R--EGAVSTFVP 458
+GA + P
Sbjct: 169 SPPKGATIPYRP 180
>gi|194306631|ref|NP_065389.2| poly(rC)-binding protein 3 isoform 1 [Homo sapiens]
gi|296439262|sp|P57721.2|PCBP3_HUMAN RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|119629729|gb|EAX09324.1| poly(rC) binding protein 3, isoform CRA_b [Homo sapiens]
Length = 371
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 144/307 (46%), Gaps = 42/307 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 211
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY-------GGYKGDT--- 263
+ + A + + ++ P T + +A P+ + G+
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 271
Query: 264 -AGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+ + +++L D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 272 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 330
Query: 322 SSTEGDD 328
++TEG
Sbjct: 331 NATEGSS 337
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 452 AVSTFVP 458
A + P
Sbjct: 206 ATIPYRP 212
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 89/234 (38%), Gaps = 72/234 (30%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET----- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 133 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVK 192
Query: 100 --------------------------------NAFEDGDKFVSPAQDALFKVHDRVI--- 124
A+ ++ P D L K+H +
Sbjct: 193 QICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQT 252
Query: 125 ------------------------AEELRGDEDS-DGGHQV-TAKLLVPSDQIGCVIGKG 158
A+ L G D T +L +P+D IGC+IG+
Sbjct: 253 PFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQ 312
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G + IR +GAQI+I + S+ + I+G + + A I +RL
Sbjct: 313 GTKINEIRQMSGAQIKIAN-----ATEGSSERQITITGTPANISLAQYLINARL 361
>gi|9957165|gb|AAG09240.1|AF176329_1 alphaCP-3 [Homo sapiens]
Length = 339
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 144/307 (46%), Gaps = 42/307 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 179
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY-------GGYKGDT--- 263
+ + A + + ++ P T + +A P+ + G+
Sbjct: 180 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 239
Query: 264 -AGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+ + +++L D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 240 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 298
Query: 322 SSTEGDD 328
++TEG
Sbjct: 299 NATEGSS 305
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 62 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 122 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 173
Query: 452 AVSTFVP 458
A + P
Sbjct: 174 ATIPYRP 180
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 89/234 (38%), Gaps = 72/234 (30%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET----- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 101 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVK 160
Query: 100 --------------------------------NAFEDGDKFVSPAQDALFKVHDRVI--- 124
A+ ++ P D L K+H +
Sbjct: 161 QICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQT 220
Query: 125 ------------------------AEELRGDEDS-DGGHQV-TAKLLVPSDQIGCVIGKG 158
A+ L G D T +L +P+D IGC+IG+
Sbjct: 221 PFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQ 280
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G + IR +GAQI+I + S+ + I+G + + A I +RL
Sbjct: 281 GTKINEIRQMSGAQIKIAN-----ATEGSSERQITITGTPANISLAQYLINARL 329
>gi|440901500|gb|ELR52431.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Bos grunniens
mutus]
Length = 600
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 191/427 (44%), Gaps = 72/427 (16%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAITPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S+ ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 455
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 456 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 509
Query: 391 I-------------ITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDL--AKDA 434
+ E++ L+ A + ++P++ P E+D+ +V+I+G A
Sbjct: 510 TAIPLNVISVYLLQVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQASPL 565
Query: 435 LIQVMTR 441
L+QV R
Sbjct: 566 LLQVAQR 572
>gi|354484186|ref|XP_003504271.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Cricetulus griseus]
Length = 487
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 173/400 (43%), Gaps = 72/400 (18%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
DH ++ ++G I D R L P + +G+IIG+ G +K + T+S++ I
Sbjct: 105 DHSSREQGHSGSSSQTRQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIH 161
Query: 80 -ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGG 137
+ G+ E+ VT+++ + T+ +A R+I E ++ + ED+
Sbjct: 162 RKENSGAAEKPVTIHATPEGTS-------------EAC-----RMILEIMQKEAEDTKLA 203
Query: 138 HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGE 197
+V K+L + +G +IGK G+ ++ I ETG +I I + L + + + G
Sbjct: 204 EEVPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGT 261
Query: 198 ASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG 257
A +I +L + + +LA NSHS G +
Sbjct: 262 IDACANAEMEIMKKLRE--AFENDMLAV---NSHS---------------------GYFP 295
Query: 258 GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAI 317
+S P + ++ L P +G +IGK GA I Q+ + +GA+I
Sbjct: 296 NMYPHHHFGPFPHHHSYPEQE------TVNLFIPTQAVGAIIGKKGAHIKQLARFAGASI 349
Query: 318 KVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTT 372
K+ + EG D VS + ++ EA + Q R K++ ++ +
Sbjct: 350 KI--APAEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEA 400
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLP 412
+ VP+S G +IGKGG + E++ LT A + I+P++ P
Sbjct: 401 HIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP 439
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 41/203 (20%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS---STEGDDCLITV 333
D ++E L+++ +G +IGK G + +I E+G I + S S + ITV
Sbjct: 199 DTKLAEEVPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITV 258
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERD-------SGLI----------------SF 370
T+ A A + + + E E D SG S+
Sbjct: 259 KG------TIDACANAEMEIMKKLREAFENDMLAVNSHSGYFPNMYPHHHFGPFPHHHSY 312
Query: 371 ----TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
T L +PT +G +IGK G+ I ++ R A+I+I P E P ++ + MV I+G
Sbjct: 313 PEQETVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG-PDVS---ERMVIITG 368
Query: 427 DLDLAKDALIQVMTRLR-ANLFD 448
+ A ++ +L+ N F+
Sbjct: 369 PPEAQFKAQGRIFGKLKEENFFN 391
>gi|326922311|ref|XP_003207393.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 313
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 137/292 (46%), Gaps = 38/292 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTD-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +IA + D + + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAF-AMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLHDNPS 217
G ++ IR TGAQ+++ D LP+ R+ V ISG + + + QI L
Sbjct: 117 GSKIKEIRESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLEAYTI 172
Query: 218 RSQHLLASA-ISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
+ Q+ + ++ H + + T TP+ P P ++ + + +
Sbjct: 173 QGQYAIPHPDLTKLHQLA---MQQTPFTPLGQTTPAF-PGEKLPLHSSEEAQNLMGQSSG 228
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
D S + L P IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 229 LDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-ANATEGSS 279
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I+NS S+S + T+ P+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------ITNSMSNSTA----TSKPPV----- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 30/169 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 62 TGPTDAIFKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
E+R T A +++ + LP + + V ISG DA+IQ + ++
Sbjct: 122 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQI 162
>gi|148699884|gb|EDL31831.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699885|gb|EDL31832.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699886|gb|EDL31833.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699889|gb|EDL31836.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699890|gb|EDL31837.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|149043678|gb|EDL97129.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043679|gb|EDL97130.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043680|gb|EDL97131.1| rCG61051, isoform CRA_b [Rattus norvegicus]
Length = 339
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 144/307 (46%), Gaps = 42/307 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 179
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY-------GGYKGDT--- 263
+ + A + + ++ P T + +A P+ + G+
Sbjct: 180 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 239
Query: 264 -AGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+ + +++L D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 240 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 298
Query: 322 SSTEGDD 328
++TEG
Sbjct: 299 NATEGSS 305
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 62 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 122 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 173
Query: 452 AVSTFVP 458
A + P
Sbjct: 174 ATIPYRP 180
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 89/234 (38%), Gaps = 72/234 (30%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET----- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 101 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVK 160
Query: 100 --------------------------------NAFEDGDKFVSPAQDALFKVHDRVI--- 124
A+ ++ P D L K+H +
Sbjct: 161 QICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQT 220
Query: 125 ------------------------AEELRGDEDS-DGGHQV-TAKLLVPSDQIGCVIGKG 158
A+ L G D T +L +P+D IGC+IG+
Sbjct: 221 PFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQ 280
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G + IR +GAQI+I + S+ + I+G + + A I +RL
Sbjct: 281 GTKINEIRQMSGAQIKIAN-----ATEGSSERQITITGTPANISLAQYLINARL 329
>gi|357615456|gb|EHJ69667.1| putative igf2 mRNA binding protein [Danaus plexippus]
Length = 599
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 184/400 (46%), Gaps = 63/400 (15%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L +G+IIGR G ++ + +++++ + + GS E+ +T+Y D
Sbjct: 136 PTDFPLRLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVHRKDNVGSLEKAITIYGNPDN 195
Query: 99 -TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
TNA + I E ++ + ++ ++ K+L ++ IG +IGK
Sbjct: 196 CTNAC-------------------KRILEVMQQEANNTNKGEICLKILAHNNLIGRIIGK 236
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GG ++ I ET +I + + S L + ++ + G + KA QI+++L +
Sbjct: 237 GGNTIKRIMQETDTKITVSSINDINSFNL--ERIITVKGTIENMAKAESQISAKLRQSYE 294
Query: 218 RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL--MGPYGGYKGDTAGDWSRSLYSAP 275
+LA S++ P G+ P+ M G+ G A AP
Sbjct: 295 NDLQVLAPQ---------SIMFP-------GLHPMAMMSTGRGFCG--APPPFPPPIYAP 336
Query: 276 --------RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
+ S+E + L P +G +IG G+ I I + S A++K+ + E D
Sbjct: 337 LAGQGGAQQGAGDSQE-TTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI--APLEQD 393
Query: 328 DCLI-TVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSR 380
+ +V++++ + T+ + EA + Q EK+ R+ G +S T ++V +S+
Sbjct: 394 KVIEGSVAAQQERKVTIVGSPEAQWKAQYLIFEKM-REEGFMSGSDDVRLTVAIVVASSQ 452
Query: 381 IGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE 420
+G +IGKGG + E++R+T + I+ LP++ P A+ +D
Sbjct: 453 VGRIIGKGGQNVRELQRVTGSLIK-LPEQPQPPTAAGNDH 491
>gi|348554794|ref|XP_003463210.1| PREDICTED: poly(rC)-binding protein 3-like [Cavia porcellus]
Length = 384
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 140/307 (45%), Gaps = 42/307 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 62 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 113
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 114 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 168
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 169 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 224
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSL 271
+ + A + + ++ P T + +A P+ G L
Sbjct: 225 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 284
Query: 272 YSAPRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+S+ D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 285 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 343
Query: 322 SSTEGDD 328
++TEG
Sbjct: 344 NATEGSS 350
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 51 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 103
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 104 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 143
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 144 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 170
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 171 STGAQVQV 178
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 59 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 106
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 107 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 166
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 167 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 218
Query: 452 AVSTFVP 458
A + P
Sbjct: 219 ATIPYRP 225
>gi|431909188|gb|ELK12778.1| RNA-binding protein Nova-2 [Pteropus alecto]
Length = 334
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 132/300 (44%), Gaps = 41/300 (13%)
Query: 25 KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET--- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 23 KRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 74
Query: 82 VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQV 140
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 75 YPGTTERVCLVQGTAEALNAVHS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK 131
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 132 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQ 188
Query: 201 VKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYK 260
V KA+ I ++ ++P S L S A + GP
Sbjct: 189 VHKAVSAIVQKVQEDPQSSSCLNIS-----------------------YANVAGPVANSN 225
Query: 261 GDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
A + +A + S + + + P +G ++GKGG + + ++ +GA I++
Sbjct: 226 PTAAAGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQIS 285
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 92 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 149
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 150 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 201
>gi|332872312|ref|XP_001157899.2| PREDICTED: poly(rC)-binding protein 3 isoform 8 [Pan troglodytes]
gi|397506692|ref|XP_003823855.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Pan paniscus]
gi|426393341|ref|XP_004062983.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 371
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 144/307 (46%), Gaps = 42/307 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 211
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY-------GGYKGDT--- 263
+ + A + + ++ P T + +A P+ + G+
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 271
Query: 264 -AGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+ + +++L D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 272 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 330
Query: 322 SSTEGDD 328
++TEG
Sbjct: 331 NATEGSS 337
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 452 AVSTFVP 458
A + P
Sbjct: 206 ATIPYRP 212
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 89/234 (38%), Gaps = 72/234 (30%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET----- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 133 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVK 192
Query: 100 --------------------------------NAFEDGDKFVSPAQDALFKVHDRVI--- 124
A+ ++ P D L K+H +
Sbjct: 193 QICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQT 252
Query: 125 ------------------------AEELRGDEDS-DGGHQV-TAKLLVPSDQIGCVIGKG 158
A+ L G D T +L +P+D IGC+IG+
Sbjct: 253 PFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQ 312
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G + IR +GAQI+I + S+ + I+G + + A I +RL
Sbjct: 313 GTKINEIRQMSGAQIKIAN-----ATEGSSERQITITGTPANISLAQYLINARL 361
>gi|380798665|gb|AFE71208.1| poly(rC)-binding protein 3 isoform 1, partial [Macaca mulatta]
Length = 370
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 144/307 (46%), Gaps = 42/307 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 48 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 99
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 100 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 154
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 155 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 210
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY-------GGYKGDT--- 263
+ + A + + ++ P T + +A P+ + G+
Sbjct: 211 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 270
Query: 264 -AGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+ + +++L D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 271 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 329
Query: 322 SSTEGDD 328
++TEG
Sbjct: 330 NATEGSS 336
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 37 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 89
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 90 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 129
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 130 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 156
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 157 STGAQVQV 164
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 45 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 92
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 93 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 152
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 153 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 204
Query: 452 AVSTFVP 458
A + P
Sbjct: 205 ATIPYRP 211
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T +L +P+D IGC+IG+ G + IR +GAQI+I + S+ + I+G +
Sbjct: 294 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-----ATEGSSERQITITGTPAN 348
Query: 201 VKKALCQIASRL 212
+ A I +RL
Sbjct: 349 ISLAQYLINARL 360
>gi|327265639|ref|XP_003217615.1| PREDICTED: poly(rC)-binding protein 4-like [Anolis carolinensis]
Length = 422
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 142/302 (47%), Gaps = 54/302 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ ++D
Sbjct: 31 RMLMHGKEVGSIIGKKGETVKRIREQSTARITISE---GSCPERITTITGSTD------- 80
Query: 105 GDKFVSPAQDALFKVHDRVI--AEELRGDEDSDGGH----QVTAKLLVPSDQIGCVIGKG 158
A+F+ + EE G +GG VT +L++P+ Q G +IGK
Sbjct: 81 ----------AVFRAVSMIAFKLEEDLGTGAINGGTVSKPPVTLRLVIPASQCGSLIGKA 130
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ V +SG + + + QI + + ++P +
Sbjct: 131 GAKIKEIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIIQCVRQICAVILESPPK 186
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR--------- 269
+ + + SL GP + G + + G YGG +
Sbjct: 187 GATI-------PYHPNLSL-GPVLLSANQGFS-MQGQYGGISQAEVAKLQQLSGHPVSFS 237
Query: 270 SLYSAPRD----DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE 325
SL P D +S+ S + P IG +IG+ G+ I++IRQ SGA IK+ + TE
Sbjct: 238 SLGQTPSIVAGLDTNSQNSSQEFLVPNDLIGCIIGRQGSKISEIRQMSGAHIKIG-NQTE 296
Query: 326 GD 327
G
Sbjct: 297 GS 298
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 92/187 (49%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
+LR++ +G +IGK G + +IR++S A I + S C ++ T+
Sbjct: 28 LTLRMLMHGKEVGSIIGKKGETVKRIREQSTARITISEGS-----CPERIT-------TI 75
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ + +AV R + K+E D +G I+ T RL++P S+ G LIGK G+ I
Sbjct: 76 TGSTDAVFRAVSMIAFKLEEDLGTGAINGGTVSKPPVTLRLVIPASQCGSLIGKAGAKIK 135
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V +SG DA+IQ + ++ A + + +G
Sbjct: 136 EIRETTGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIIQCVRQICAVILESPPKG 187
Query: 452 AVSTFVP 458
A + P
Sbjct: 188 ATIPYHP 194
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 66/207 (31%)
Query: 119 VHDRVIAEELR------GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQ 172
+H ++A R G E+++ +T ++L+ ++G +IGK G+ V+ IR ++ A+
Sbjct: 1 MHSYIMASPDRMSSSDNGLEETELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSTAR 60
Query: 173 IRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHS 232
I I + SC R + I+G V +A+ IA +L ++
Sbjct: 61 ITISEG----SCPER---ITTITGSTDAVFRAVSMIAFKLEED----------------L 97
Query: 233 SSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPV 292
+G++ G T + P V +LRLV P
Sbjct: 98 GTGAINGGTVSKPPV-------------------------------------TLRLVIPA 120
Query: 293 ANIGGVIGKGGAIINQIRQESGAAIKV 319
+ G +IGK GA I +IR+ +GA ++V
Sbjct: 121 SQCGSLIGKAGAKIKEIRETTGAQVQV 147
>gi|402860705|ref|XP_003894763.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Papio anubis]
Length = 542
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 186/412 (45%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 136 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 195
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 196 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 237
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L + + + G A +I +L +N
Sbjct: 238 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 295
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 296 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPH 355
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 356 HQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 413
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 414 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 466
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 467 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 514
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE V P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 368 PEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 426
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 427 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 471
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 472 GKTVNELQNLTSAEVIVPRDQ 492
>gi|332215037|ref|XP_003256643.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 6 [Nomascus leucogenys]
Length = 542
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 186/412 (45%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 136 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 195
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 196 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 237
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L + + + G A +I +L +N
Sbjct: 238 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 295
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 296 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPH 355
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 356 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 413
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 414 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 466
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 467 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 514
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 368 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 426
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 427 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 471
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 472 GKTVNELQNLTSAEVIVPRDQ 492
>gi|396578132|ref|NP_001257527.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform 1
[Rattus norvegicus]
gi|149019899|gb|EDL78047.1| similar to IGF-II mRNA-binding protein 2 (predicted) [Rattus
norvegicus]
Length = 592
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 181/399 (45%), Gaps = 51/399 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 186 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 245
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + +V K+L + +G +IGK G
Sbjct: 246 -------------EAC-----RMILEIMQKEADETKLAEEVPLKILAHNGFVGRLIGKEG 287
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 288 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTIEACASAEMEIMKKLREAFEND 345
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A +P P+ + G + +
Sbjct: 346 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPSPPYHPFATHSGYFSSLYPH 405
Query: 270 SLYSAPRDDLSSKEF-SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ S E ++ L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 406 HHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 463
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 464 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 516
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 517 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 551
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 418 PEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 476
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 477 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 521
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 522 GKTVNELQNLTSAEVIVPRDQ 542
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T L +PT +G +IGK G+ I ++ R A+I+I P E P ++ + MV I+G +
Sbjct: 422 TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG-PDVS---ERMVIITGPPEA 477
Query: 431 AKDALIQVMTRLR-ANLFD 448
A ++ +L+ N F+
Sbjct: 478 QFKAQGRIFGKLKEENFFN 496
>gi|354476790|ref|XP_003500606.1| PREDICTED: poly(rC)-binding protein 3 [Cricetulus griseus]
gi|149043674|gb|EDL97125.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043675|gb|EDL97126.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043676|gb|EDL97127.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043677|gb|EDL97128.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|344241934|gb|EGV98037.1| Poly(rC)-binding protein 3 [Cricetulus griseus]
Length = 371
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 144/307 (46%), Gaps = 42/307 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 211
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY-------GGYKGDT--- 263
+ + A + + ++ P T + +A P+ + G+
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 271
Query: 264 -AGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+ + +++L D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 272 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 330
Query: 322 SSTEGDD 328
++TEG
Sbjct: 331 NATEGSS 337
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 452 AVSTFVP 458
A + P
Sbjct: 206 ATIPYRP 212
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 89/234 (38%), Gaps = 72/234 (30%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET----- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 133 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVK 192
Query: 100 --------------------------------NAFEDGDKFVSPAQDALFKVHDRVI--- 124
A+ ++ P D L K+H +
Sbjct: 193 QICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQT 252
Query: 125 ------------------------AEELRGDEDS-DGGHQV-TAKLLVPSDQIGCVIGKG 158
A+ L G D T +L +P+D IGC+IG+
Sbjct: 253 PFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQ 312
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G + IR +GAQI+I + S+ + I+G + + A I +RL
Sbjct: 313 GTKINEIRQMSGAQIKIAN-----ATEGSSERQITITGTPANISLAQYLINARL 361
>gi|431838851|gb|ELK00780.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Pteropus
alecto]
Length = 820
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 187/412 (45%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 414 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 473
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 474 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 515
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 516 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 573
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A AP P+ + G + +
Sbjct: 574 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSLYPP 633
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+S P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 634 HQFSPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 691
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 692 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 744
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 745 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 792
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 646 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 704
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 705 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 749
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 750 GKTVNELQNLTSAEVIVPRDQ 770
>gi|403297203|ref|XP_003939468.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 371
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 144/307 (46%), Gaps = 42/307 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 211
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY-------GGYKGDT--- 263
+ + A + + ++ P T + +A P+ + G+
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 271
Query: 264 -AGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+ + +++L D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 272 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 330
Query: 322 SSTEGDD 328
++TEG
Sbjct: 331 NATEGSS 337
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 452 AVSTFVP 458
A + P
Sbjct: 206 ATIPYRP 212
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T +L +P+D IGC+IG+ G + IR +GAQI+I + S+ + I+G +
Sbjct: 295 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-----ATEGSSERQITITGTPAN 349
Query: 201 VKKALCQIASRL 212
+ A I +RL
Sbjct: 350 ISLAQYLINARL 361
>gi|440894425|gb|ELR46887.1| Poly(rC)-binding protein 3 [Bos grunniens mutus]
Length = 374
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 144/307 (46%), Gaps = 42/307 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 52 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 103
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 104 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 158
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 159 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 214
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY-------GGYKGDT--- 263
+ + A + + ++ P T + +A P+ + G+
Sbjct: 215 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 274
Query: 264 -AGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+ + +++L D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 275 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 333
Query: 322 SSTEGDD 328
++TEG
Sbjct: 334 NATEGSS 340
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 41 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 93
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 94 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 133
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 134 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 160
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 161 STGAQVQV 168
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 49 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 96
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 97 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 156
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 157 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 208
Query: 452 AVSTFVP 458
A + P
Sbjct: 209 ATIPYRP 215
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 89/234 (38%), Gaps = 72/234 (30%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET----- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 136 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVK 195
Query: 100 --------------------------------NAFEDGDKFVSPAQDALFKVHDRVI--- 124
A+ ++ P D L K+H +
Sbjct: 196 QICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQT 255
Query: 125 ------------------------AEELRGDEDS-DGGHQV-TAKLLVPSDQIGCVIGKG 158
A+ L G D T +L +P+D IGC+IG+
Sbjct: 256 PFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQ 315
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G + IR +GAQI+I + S+ + I+G + + A I +RL
Sbjct: 316 GTKINEIRQMSGAQIKIAN-----ATEGSSERQITITGTPANISLAQYLINARL 364
>gi|224153471|ref|XP_002337357.1| predicted protein [Populus trichocarpa]
gi|222838904|gb|EEE77255.1| predicted protein [Populus trichocarpa]
Length = 103
Score = 78.2 bits (191), Expect = 8e-12, Method: Composition-based stats.
Identities = 37/69 (53%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 372 TRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLA 431
TRLLVP+S++GC++G+G I EMRRL +A I + PK PK ASED+E+VQISG+ +A
Sbjct: 3 TRLLVPSSKVGCILGQGSQDINEMRRL-QAEICVYPKNEKPKCASEDEELVQISGNYGVA 61
Query: 432 KDALIQVMT 440
KD L+ + +
Sbjct: 62 KDVLVDIAS 70
Score = 56.6 bits (135), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
+LLVPS ++GC++G+G Q + +R A+I + P CA +ELVQISG V K
Sbjct: 4 RLLVPSSKVGCILGQGSQDINEMR-RLQAEICVYPKNEKPKCASEDEELVQISGNYGVAK 62
Query: 203 KALCQIAS 210
L IAS
Sbjct: 63 DVLVDIAS 70
>gi|171906586|ref|NP_067543.2| poly(rC)-binding protein 3 [Mus musculus]
gi|296439279|sp|P57722.3|PCBP3_MOUSE RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|26348076|dbj|BAC37686.1| unnamed protein product [Mus musculus]
gi|148699881|gb|EDL31828.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699882|gb|EDL31829.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699883|gb|EDL31830.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699888|gb|EDL31835.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
Length = 371
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 144/307 (46%), Gaps = 42/307 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 211
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY-------GGYKGDT--- 263
+ + A + + ++ P T + +A P+ + G+
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 271
Query: 264 -AGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+ + +++L D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 272 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 330
Query: 322 SSTEGDD 328
++TEG
Sbjct: 331 NATEGSS 337
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 452 AVSTFVP 458
A + P
Sbjct: 206 ATIPYRP 212
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T +L +P+D IGC+IG+ G + IR +GAQI+I + S+ + I+G +
Sbjct: 295 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-----ATEGSSERQITITGTPAN 349
Query: 201 VKKALCQIASRL 212
+ A I +RL
Sbjct: 350 ISLAQYLINARL 361
>gi|402860703|ref|XP_003894762.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Papio anubis]
Length = 536
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 185/412 (44%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 130 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 189
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 190 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 231
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 232 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 289
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 290 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPH 349
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 350 HQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 407
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 408 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 460
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 461 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 508
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE V P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 362 PEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 420
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 421 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 465
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 466 GKTVNELQNLTSAEVIVPRDQ 486
>gi|119629730|gb|EAX09325.1| poly(rC) binding protein 3, isoform CRA_c [Homo sapiens]
Length = 370
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 41/306 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL--- 222
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 211
Query: 223 -------LASAISNSHSSSGSLVGPTA--------ATPIVGIAPLMGPYGGYKGDT---- 263
+ A +++ G P A PL + G+
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLH 271
Query: 264 AGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
+ + +++L D S + L P IG +IG+ G IN+IRQ SGA IK+ ++
Sbjct: 272 SSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-AN 330
Query: 323 STEGDD 328
+TEG
Sbjct: 331 ATEGSS 336
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 452 AVSTFVP 458
A + P
Sbjct: 206 ATIPYRP 212
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T +L +P+D IGC+IG+ G + IR +GAQI+I + S+ + I+G +
Sbjct: 294 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-----ATEGSSERQITITGTPAN 348
Query: 201 VKKALCQIASRL 212
+ A I +RL
Sbjct: 349 ISLAQYLINARL 360
>gi|384947752|gb|AFI37481.1| poly(rC)-binding protein 3 isoform 1 [Macaca mulatta]
Length = 370
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 41/306 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL--- 222
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 211
Query: 223 -------LASAISNSHSSSGSLVGPTA--------ATPIVGIAPLMGPYGGYKGDT---- 263
+ A +++ G P A PL + G+
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLH 271
Query: 264 AGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
+ + +++L D S + L P IG +IG+ G IN+IRQ SGA IK+ ++
Sbjct: 272 SSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-AN 330
Query: 323 STEGDD 328
+TEG
Sbjct: 331 ATEGSS 336
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 452 AVSTFVP 458
A + P
Sbjct: 206 ATIPYRP 212
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T +L +P+D IGC+IG+ G + IR +GAQI+I + S+ + I+G +
Sbjct: 294 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-----ATEGSSERQITITGTPAN 348
Query: 201 VKKALCQIASRL 212
+ A I +RL
Sbjct: 349 ISLAQYLINARL 360
>gi|348507477|ref|XP_003441282.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 434
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 137/304 (45%), Gaps = 54/304 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E S ER+VT+ ++
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SSPERIVTITGPTE-------- 69
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGD-------EDSDGGHQVTAKLLVPSDQIGCVIGKG 158
+F+ +IA++ D + VT +L+ P Q G +IGKG
Sbjct: 70 ---------GIFRAFS-MIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKG 119
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP R+ V ISG + + + I S + ++P +
Sbjct: 120 GSKIKEIRETTGAQVQVAGD-MLPDSTERA---VTISGTPQAITQCVRHICSVMLESPPK 175
Query: 219 SQHLLASA---ISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTA----------- 264
+ + +H +++ P + I G Y D
Sbjct: 176 GATIPYRPKVIPAGTH----AVLAPQHSAQAFAIP---GQYAFAHQDLTKLHQLAMQHIP 228
Query: 265 -GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
+S + P D S+ S L P IG +IG+ G+ IN+IRQ SGA IK+ +S+
Sbjct: 229 LPSLGQSNPTFPGLDASAPTSSQELAIPNDFIGCIIGRQGSKINEIRQVSGAHIKI-ASA 287
Query: 324 TEGD 327
T+G
Sbjct: 288 TDGS 291
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----------TEGDDCLIT 332
+LRL+ +G +IGK G + ++R+ESGA I + S TEG +
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSSPERIVTITGPTEGIFRAFS 76
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ +++F ED +A + V +P T RL+ P S+ G LIGKGGS I
Sbjct: 77 MIAQKFEEDITAAMTNSNVTSKP-------------PVTLRLVFPGSQCGSLIGKGGSKI 123
Query: 393 TEMRRLTKANIRI 405
E+R T A +++
Sbjct: 124 KEIRETTGAQVQV 136
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
SDG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I S + +
Sbjct: 9 SDGSLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINI-------SEGSSPERI 61
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + +A IA + ++ + +A++NS+ +S V
Sbjct: 62 VTITGPTEGIFRAFSMIAQKFEED-------ITAAMTNSNVTSKPPV------------- 101
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 102 ---------------------------------TLRLVFPGSQCGSLIGKGGSKIKEIRE 128
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 129 TTGAQVQV 136
>gi|335289843|ref|XP_003127279.2| PREDICTED: RNA-binding protein Nova-2 [Sus scrofa]
Length = 492
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 109/231 (47%), Gaps = 24/231 (10%)
Query: 25 KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET--- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 23 KRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 74
Query: 82 VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQV 140
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 75 YPGTTERVCLVQGTAEALNAVHS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK 131
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 132 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQ 188
Query: 201 VKKALCQIASRLHDNPSRSQHL------LASAISNSHSSSGSLVGPTAATP 245
V KA+ I ++ ++P S L +A ++NS+ + P P
Sbjct: 189 VHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLP 239
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 92 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 149
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 150 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 201
>gi|109042328|ref|XP_001095336.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 5 [Macaca mulatta]
gi|402860699|ref|XP_003894760.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Papio anubis]
Length = 599
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 179/399 (44%), Gaps = 51/399 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 352
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 353 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPH 412
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 413 HQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 470
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 471 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 523
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 524 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 558
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE V P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 425 PEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 483
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 484 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 528
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 529 GKTVNELQNLTSAEVIVPRDQ 549
>gi|109065035|ref|XP_001099540.1| PREDICTED: poly(rC)-binding protein 3-like isoform 4 [Macaca
mulatta]
Length = 370
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 41/306 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL--- 222
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 211
Query: 223 -------LASAISNSHSSSGSLVGPTA--------ATPIVGIAPLMGPYGGYKGDT---- 263
+ A +++ G P A PL + G+
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLH 271
Query: 264 AGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
+ + +++L D S + L P IG +IG+ G IN+IRQ SGA IK+ ++
Sbjct: 272 SSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-AN 330
Query: 323 STEGDD 328
+TEG
Sbjct: 331 ATEGSS 336
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 452 AVSTFVP 458
A + P
Sbjct: 206 ATIPYRP 212
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T +L +P+D IGC+IG+ G + IR +GAQI+I + S+ + I+G +
Sbjct: 294 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-----ATEGSSERQITITGTPAN 348
Query: 201 VKKALCQIASRL 212
+ A I +RL
Sbjct: 349 ISLAQYLINARL 360
>gi|395854336|ref|XP_003799652.1| PREDICTED: RNA-binding protein Nova-2, partial [Otolemur garnettii]
Length = 487
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 109/231 (47%), Gaps = 24/231 (10%)
Query: 25 KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET--- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 18 KRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 69
Query: 82 VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQV 140
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 70 YPGTTERVCLVQGTAEALNAVHS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK 126
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 127 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQ 183
Query: 201 VKKALCQIASRLHDNPSRSQHL------LASAISNSHSSSGSLVGPTAATP 245
V KA+ I ++ ++P S L +A ++NS+ + P P
Sbjct: 184 VHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLP 234
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 27 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 86
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 87 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 144
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 145 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 196
>gi|332215029|ref|XP_003256639.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Nomascus leucogenys]
Length = 536
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 185/412 (44%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 130 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 189
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 190 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 231
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 232 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 289
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 290 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPH 349
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 350 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 407
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 408 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 460
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 461 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 508
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 362 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 420
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 421 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 465
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 466 GKTVNELQNLTSAEVIVPRDQ 486
>gi|15082311|gb|AAH12061.1| PCBP3 protein [Homo sapiens]
Length = 313
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 138/290 (47%), Gaps = 34/290 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLHDNPSRSQHLLA 224
R TGAQ+++ D LP+ R+ V ISG + + + QI L + Q+ +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIP 179
Query: 225 SA-ISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDT----AGDWSRSLYSAPRD-D 278
++ H + TP PL + G+ + + +++L D
Sbjct: 180 HPDLTKLHQLA------MQQTP---FPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLD 230
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
S + L P IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 231 ASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-ANATEGSS 279
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 40/174 (22%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD--DCLITVS------- 334
++RL+ +G +IGK G + ++R+ESGA I + +EG+ + ++T++
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIF 69
Query: 335 ------SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKG 388
+ +F ED +++ + +P T RL+VP S+ G LIGKG
Sbjct: 70 KAFAMIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKG 116
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
GS I E+R T A +++ + LP + + V ISG DA+IQ + ++
Sbjct: 117 GSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQI 162
>gi|350424346|ref|XP_003493765.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Bombus impatiens]
Length = 626
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 196/426 (46%), Gaps = 58/426 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE-T 99
D R L +G+IIGR G ++Q+ T++++ + + G+ E+ +T+Y + T
Sbjct: 186 DFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENCT 245
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
NA + K + Q + + S G +++ ++L ++ IG +IGKGG
Sbjct: 246 NACK---KIMEVTQQEAYGL--------------SKG--EISLRILAHNNLIGRIIGKGG 286
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
++ I +T +I + + + L + ++ + G + KA I+S+L ++N
Sbjct: 287 TTIKKIMQDTDTKITVSSINDINNFNL--ERIITVKGSIDNMSKAESMISSKLRQSYEND 344
Query: 217 SRS---QHLLASAISNSHSSSGSLVGPTAATP-IVGIAPLMGPYGGYKGDTAGDWSRSLY 272
++ Q L+ + S + +G ++ P + G P PY T+ + +
Sbjct: 345 LQAMAPQSLMFPGLHPMAMMSTAGMGYSSRGPGLYGTGPAPYPY-----QTSLPTQQGI- 398
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P D F L P ++G +IG G+ I I + SGA++K+ + E D
Sbjct: 399 --PIGDTQETAF---LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKI--APIEQDK---P 448
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCLIG 386
V + + T+ + E+ + Q EK+ R+ G + T +LVP++++G +IG
Sbjct: 449 VEQQNDRKVTIVGSPESQWKAQYLIFEKM-REEGFVGGTEDVRLTIEILVPSTQVGRIIG 507
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
KGG + E++R+T + I++ +++ A E + VQI G + A R+RA +
Sbjct: 508 KGGQNVRELQRVTGSIIKLSEQQSTSPSADE-EATVQIIGPFFSVQSA----QRRIRAMV 562
Query: 447 FDREGA 452
GA
Sbjct: 563 LQSSGA 568
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 29/172 (16%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T + Y+ P +G+IIG G ++ + + + ++I + V +R VT+
Sbjct: 404 QETAFLYI-PNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVG- 461
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---VTAKLLVPSDQIG 152
SP ++ +K +I E++R +E GG + +T ++LVPS Q+G
Sbjct: 462 --------------SP--ESQWKAQ-YLIFEKMR-EEGFVGGTEDVRLTIEILVPSTQVG 503
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
+IGKGGQ V+ ++ TG+ I+ L ++ S + + VQI G V+ A
Sbjct: 504 RIIGKGGQNVRELQRVTGSIIK-LSEQQSTSPSADEEATVQIIGPFFSVQSA 554
>gi|363735768|ref|XP_003641607.1| PREDICTED: poly(rC)-binding protein 3-like [Gallus gallus]
gi|449506326|ref|XP_002191682.2| PREDICTED: poly(rC)-binding protein 3 [Taeniopygia guttata]
Length = 339
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 139/315 (44%), Gaps = 58/315 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTD-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGD-------EDSDGGHQVTAKLLVPSDQIGCVIGKG 158
A+FK +IA + D + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFA-MIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 117 GSKIKEIRESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 172
Query: 219 SQHL----------LASAISNSHSSSGSLVGP---------------TAATPIVGIAPLM 253
+ + A +++ G P T TP+ P
Sbjct: 173 GATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAF 232
Query: 254 GPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQES 313
P ++ + + + D S + L P IG +IG+ G IN+IRQ S
Sbjct: 233 -PGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMS 291
Query: 314 GAAIKVDSSSTEGDD 328
GA IK+ +++TEG
Sbjct: 292 GAQIKI-ANATEGSS 305
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I+NS S+S + T+ P+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------ITNSMSNSTA----TSKPPV----- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 62 TGPTDAIFKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 122 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 173
Query: 452 AVSTFVP 458
A + P
Sbjct: 174 ATIPYRP 180
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 89/234 (38%), Gaps = 72/234 (30%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET----- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 101 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVK 160
Query: 100 --------------------------------NAFEDGDKFVSPAQDALFKVHDRVI--- 124
A+ ++ P D L K+H +
Sbjct: 161 QICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQT 220
Query: 125 ------------------------AEELRGDEDS-DGGHQV-TAKLLVPSDQIGCVIGKG 158
A+ L G D T +L +P+D IGC+IG+
Sbjct: 221 PFTPLGQTTPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQ 280
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G + IR +GAQI+I + S+ + I+G + + A I +RL
Sbjct: 281 GTKINEIRQMSGAQIKIAN-----ATEGSSERQITITGTPANISLAQYLINARL 329
>gi|224131210|ref|XP_002328482.1| predicted protein [Populus trichocarpa]
gi|222838197|gb|EEE76562.1| predicted protein [Populus trichocarpa]
Length = 346
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDED---SDGGHQVTAKLLVPSDQIGCVIG 156
+A E+ D + PA D L +VH R+I + L GD G +V+ +LLVP+ Q G +IG
Sbjct: 3 SAKEEPDSSLPPAMDGLLRVHKRII-DGLEGDSSHAPPSSGAKVSTRLLVPASQAGSLIG 61
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
K G V++I+ + +R+L E LP +L+ D +V++ GEA V KA+ IAS+L
Sbjct: 62 KQGGTVKSIQEASACIVRVLGAEDLPVFSLQDDRVVEVLGEAVGVHKAVELIASQL 117
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 11/134 (8%)
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCLIG 386
VS+KE + +L ++ ++R+ R + +E DS +TRLLVP S+ G LIG
Sbjct: 2 VSAKEEPDSSLPPAMDGLLRVHKRIIDGLEGDSSHAPPSSGAKVSTRLLVPASQAGSLIG 61
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
K G + ++ + +R+L E+LP + +DD +V++ G+ A+ + ++LR L
Sbjct: 62 KQGGTVKSIQEASACIVRVLGAEDLPVFSLQDDRVVEVLGEAVGVHKAVELIASQLRKFL 121
Query: 447 FDREGAVSTFVPVF 460
DR + +P+F
Sbjct: 122 VDR-----SIIPLF 130
>gi|119577801|gb|EAW57397.1| neuro-oncological ventral antigen 2 [Homo sapiens]
Length = 556
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 109/231 (47%), Gaps = 24/231 (10%)
Query: 25 KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET--- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 87 KRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 138
Query: 82 VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQV 140
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 139 YPGTTERVCLVQGTAEALNAVHS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK 195
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 196 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQ 252
Query: 201 VKKALCQIASRLHDNPSRSQHL------LASAISNSHSSSGSLVGPTAATP 245
V KA+ I ++ ++P S L +A ++NS+ + P P
Sbjct: 253 VHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLP 303
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 96 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 155
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 156 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 213
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 214 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 265
>gi|396578134|ref|NP_001257528.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform 2
[Rattus norvegicus]
Length = 524
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 180/399 (45%), Gaps = 51/399 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 118 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 177
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D +V K+L + +G +IGK G
Sbjct: 178 -------------EAC-----RMILEIMQKEADETKLAEEVPLKILAHNGFVGRLIGKEG 219
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 220 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTIEACASAEMEIMKKLREAFEND 277
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A +P P+ + G + +
Sbjct: 278 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPSPPYHPFATHSGYFSSLYPH 337
Query: 270 SLYSAPRDDLSSKEF-SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ S E ++ L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 338 HHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 395
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 396 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 448
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 449 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 483
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 350 PEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 408
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 409 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 453
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 454 GKTVNELQNLTSAEVIVPRDQ 474
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T L +PT +G +IGK G+ I ++ R A+I+I P E P ++ + MV I+G +
Sbjct: 354 TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG-PDVS---ERMVIITGPPEA 409
Query: 431 AKDALIQVMTRLR-ANLFD 448
A ++ +L+ N F+
Sbjct: 410 QFKAQGRIFGKLKEENFFN 428
>gi|392884376|gb|AFM91020.1| poly(rC) binding protein 3, isoform CRAb [Callorhinchus milii]
Length = 349
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 140/326 (42%), Gaps = 74/326 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R+++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMRVESGARINISEG--NCPERIVTITGPTD-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---------VTAKLLVPSDQIGCVIG 156
A+FK + + +ED + VT +L+VP+ Q G +IG
Sbjct: 67 ---------AIFKAFAMI---AFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIG 114
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KGG ++ IR TGAQ+++ D LP+ R+ V ISG + + + QI + ++P
Sbjct: 115 KGGSKIKEIRESTGAQVQVAGD-MLPNSTERA---VTISGMPDAIIQCVKQICVVMLESP 170
Query: 217 SRSQHL-----LASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYK-GDTAGDWSRS 270
+ + ASA + A P A L+ YK T+ W
Sbjct: 171 PKGATIPYRPKPASAPVIFAGGQAYTIQGQYAIPHPDDACLLS--AEYKTALTSTLWRSP 228
Query: 271 LYSAPRDDLSSKEF---SLR---------------------------LVCPVANIGGVIG 300
+ P L + SLR L P IG +IG
Sbjct: 229 QLAHPSSQLKEAAWRPESLRGKMELKNCNEESENWGMDANPQASTHELTIPNDLIGCIIG 288
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEG 326
+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 289 RQGTKINEIRQMSGAQIKI-ANATEG 313
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
++GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 TEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMRVESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I+NS ++S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAFKFEED-----------INNSMTNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R ESGA I + + IT + F+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMRVESGARINISEGNCPERIVTITGPTDAIFK--- 70
Query: 344 SATIEAVVRLQPRCSEKIERD------SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
A + + E I + T RL+VP S+ G LIGKGGS I E+R
Sbjct: 71 -----AFAMIAFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVST 455
T A +++ + LP + + V ISG DA+IQ + ++ + + +GA
Sbjct: 126 STGAQVQVA-GDMLP---NSTERAVTISG----MPDAIIQCVKQICVVMLESPPKGATIP 177
Query: 456 FVP 458
+ P
Sbjct: 178 YRP 180
>gi|2673961|gb|AAB88661.1| astrocytic NOVA-like RNA-binding protein [Homo sapiens]
Length = 498
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 109/231 (47%), Gaps = 24/231 (10%)
Query: 25 KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET--- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 29 KRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 80
Query: 82 VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQV 140
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 81 YPGTTERVCLVQGTAEALNAVHS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK 137
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 138 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQ 194
Query: 201 VKKALCQIASRLHDNPSRSQHL------LASAISNSHSSSGSLVGPTAATP 245
V KA+ I ++ ++P S L +A ++NS+ + P P
Sbjct: 195 VHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLP 245
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 38 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 97
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 98 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 155
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 156 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 207
>gi|329663502|ref|NP_001193038.1| RNA-binding protein Nova-2 [Bos taurus]
Length = 492
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 109/231 (47%), Gaps = 24/231 (10%)
Query: 25 KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET--- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 23 KRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 74
Query: 82 VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQV 140
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 75 YPGTTERVCLVQGTAEALNAVHS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK 131
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 132 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQ 188
Query: 201 VKKALCQIASRLHDNPSRSQHL------LASAISNSHSSSGSLVGPTAATP 245
V KA+ I ++ ++P S L +A ++NS+ + P P
Sbjct: 189 VHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLP 239
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 92 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 149
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 150 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 201
>gi|5902724|ref|NP_002507.1| RNA-binding protein Nova-2 [Homo sapiens]
gi|33516944|sp|Q9UNW9.1|NOVA2_HUMAN RecName: Full=RNA-binding protein Nova-2; AltName: Full=Astrocytic
NOVA1-like RNA-binding protein; AltName:
Full=Neuro-oncological ventral antigen 2
gi|3851553|gb|AAC72355.1| RNA-binding protein Nova-2 [Homo sapiens]
gi|195934809|gb|AAI68367.1| Neuro-oncological ventral antigen 2 [synthetic construct]
Length = 492
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 109/231 (47%), Gaps = 24/231 (10%)
Query: 25 KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET--- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 23 KRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 74
Query: 82 VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQV 140
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 75 YPGTTERVCLVQGTAEALNAVHS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK 131
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 132 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQ 188
Query: 201 VKKALCQIASRLHDNPSRSQHL------LASAISNSHSSSGSLVGPTAATP 245
V KA+ I ++ ++P S L +A ++NS+ + P P
Sbjct: 189 VHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLP 239
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 92 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 149
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 150 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 201
>gi|291415485|ref|XP_002723980.1| PREDICTED: neuro-oncological ventral antigen 2 [Oryctolagus
cuniculus]
Length = 492
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 109/231 (47%), Gaps = 24/231 (10%)
Query: 25 KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET--- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 23 KRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 74
Query: 82 VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQV 140
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 75 YPGTTERVCLVQGTAEALNAVHS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK 131
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 132 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQ 188
Query: 201 VKKALCQIASRLHDNPSRSQHL------LASAISNSHSSSGSLVGPTAATP 245
V KA+ I ++ ++P S L +A ++NS+ + P P
Sbjct: 189 VHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLP 239
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 92 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 149
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 150 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 201
>gi|291219869|ref|NP_001025048.2| neuro-oncological ventral antigen 2 [Mus musculus]
Length = 492
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 109/231 (47%), Gaps = 24/231 (10%)
Query: 25 KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET--- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 23 KRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 74
Query: 82 VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQV 140
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 75 YPGTTERVCLVQGTAEALNAVHS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK 131
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 132 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQ 188
Query: 201 VKKALCQIASRLHDNPSRSQHL------LASAISNSHSSSGSLVGPTAATP 245
V KA+ I ++ ++P S L +A ++NS+ + P P
Sbjct: 189 VHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLP 239
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 92 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 149
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 150 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 201
>gi|194306633|ref|NP_001123613.1| poly(rC)-binding protein 3 isoform 2 [Homo sapiens]
gi|119629728|gb|EAX09323.1| poly(rC) binding protein 3, isoform CRA_a [Homo sapiens]
Length = 345
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 138/290 (47%), Gaps = 34/290 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLHDNPSRSQHLLA 224
R TGAQ+++ D LP+ R+ V ISG + + + QI L + Q+ +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIP 211
Query: 225 SA-ISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDT----AGDWSRSLYSAPRD-D 278
++ H + TP PL + G+ + + +++L D
Sbjct: 212 HPDLTKLHQLA------MQQTP---FPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLD 262
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
S + L P IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 263 ASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-ANATEGSS 311
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 48/209 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET----- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 133 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVK 192
Query: 100 -------NAFEDGDKFVSPAQDALFKVHDRVI---------------------------A 125
A+ ++ P D L K+H + A
Sbjct: 193 QICVVMLEAYTIQGQYAIPHPD-LTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 251
Query: 126 EELRGDEDS-DGGHQV-TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPS 183
+ L G D T +L +P+D IGC+IG+ G + IR +GAQI+I +
Sbjct: 252 QNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-----A 306
Query: 184 CALRSDELVQISGEASVVKKALCQIASRL 212
S+ + I+G + + A I +RL
Sbjct: 307 TEGSSERQITITGTPANISLAQYLINARL 335
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 30/169 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
E+R T A +++ + LP + + V ISG DA+IQ + ++
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQI 194
>gi|26330216|dbj|BAC28838.1| unnamed protein product [Mus musculus]
Length = 370
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 41/306 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL--- 222
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 211
Query: 223 -------LASAISNSHSSSGSLVGPTA--------ATPIVGIAPLMGPYGGYKGDT---- 263
+ A +++ G P A PL + G+
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLH 271
Query: 264 AGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
+ + +++L D S + L P IG +IG+ G IN+IRQ SGA IK+ ++
Sbjct: 272 SSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-AN 330
Query: 323 STEGDD 328
+TEG
Sbjct: 331 ATEGSS 336
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 452 AVSTFVP 458
A + P
Sbjct: 206 ATIPYRP 212
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T +L +P+D IGC+IG+ G + IR +GAQI+I + S+ + I+G +
Sbjct: 294 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-----ATEGSSERQITITGTPAN 348
Query: 201 VKKALCQIASRL 212
+ A I +RL
Sbjct: 349 ISLAQYLINARL 360
>gi|397470081|ref|XP_003806662.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Pan paniscus]
gi|179479866|gb|ACB86625.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 542
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 186/412 (45%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 136 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 195
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 196 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 237
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L + + + G A +I +L +N
Sbjct: 238 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 295
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 296 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSSLYPH 355
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 356 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 413
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 414 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 466
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 467 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 514
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 368 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 426
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 427 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 471
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 472 GKTVNELQNLTSAEVIVPRDQ 492
>gi|170036665|ref|XP_001846183.1| igf2 mRNA binding protein [Culex quinquefasciatus]
gi|167879496|gb|EDS42879.1| igf2 mRNA binding protein [Culex quinquefasciatus]
Length = 520
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 177/399 (44%), Gaps = 49/399 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L +G+IIGR G ++Q+ ++++++ + + GS E+ +T+Y +
Sbjct: 125 DFPLRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRKDNVGSLEKAITIYGNPENCT 184
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
+ + I E ++ + ++ ++ K+L ++ IG +IGK G
Sbjct: 185 S------------------ACKRILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKSGN 226
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
++ I +T +I + + S L + ++ + G + + QI+++L +
Sbjct: 227 TIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGSIDNMSRGESQISAKLRQSYENDL 284
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR---- 276
LA S + P A G MG + G G G S +Y P
Sbjct: 285 QALAP-----QSIMFPGLHPMAMMSTAGNG--MG-FAGRSGMYPGS-SYPMYQPPTAPGV 335
Query: 277 -DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
S + + L P +G +IG G+ I I + SGA++K+ + E D L +
Sbjct: 336 PPGSSDVQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSGASVKI--APLEADKPLEQQTE 393
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCLIGKGG 389
++ T+ T EA + Q EK+ R+ G +S T +LVP++++G +IGKGG
Sbjct: 394 RKV---TIVGTPEAQWKAQYLIFEKM-REEGFVSGTDDVRLTVEILVPSAQVGRIIGKGG 449
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL 428
+ E++R+T + I+ LP E+ +++ V I G
Sbjct: 450 QNVRELQRVTGSIIK-LP-EHTAATPVDEETTVHIIGPF 486
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 28/163 (17%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 343 QETTYLYI-PNNAVGAIIGTKGSHIRNIIRFSGASVKIAPLEADKPLEQQTERKVTIVGT 401
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV--TAKLLVPSDQIGC 153
+ A +K +I E++R + G V T ++LVPS Q+G
Sbjct: 402 PE-----------------AQWKAQ-YLIFEKMREEGFVSGTDDVRLTVEILVPSAQVGR 443
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
+IGKGGQ V+ ++ TG+ I++ EH + + + V I G
Sbjct: 444 IIGKGGQNVRELQRVTGSIIKL--PEHTAATPVDEETTVHIIG 484
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%)
Query: 354 QPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPK 413
QP + + S + TT L +P + +G +IG GS I + R + A+++I P E
Sbjct: 328 QPPTAPGVPPGSSDVQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPLEADKP 387
Query: 414 IASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
+ + + V I G + A + ++R F
Sbjct: 388 LEQQTERKVTIVGTPEAQWKAQYLIFEKMREEGF 421
>gi|148223980|ref|NP_001082843.1| uncharacterized protein LOC557028 [Danio rerio]
gi|94732695|emb|CAK10813.1| novel protein similar to human IGF-II mRNA-binding protein 2
(IMP-2) [Danio rerio]
gi|167614340|gb|ABZ89742.1| IGF-II mRNA-binding protein 2b variant 1 [Danio rerio]
gi|167614342|gb|ABZ89743.1| IGF-II mRNA-binding protein 2b variant 2 [Danio rerio]
Length = 436
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 183/413 (44%), Gaps = 62/413 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNAFED 104
R L P + +G+IIG+ G +K + T+SK+ I + G+ E+ +T++S+ +
Sbjct: 32 RILVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGATEKAITIHSSKE------- 84
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
S A + ++ ++ D+ +V K+L + +G +IGK G+ ++
Sbjct: 85 ---GCSQACRMILEIMEKEA-------NDTKIVEEVPLKILAHNSLVGRLIGKEGRNLKK 134
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN--PSRS 219
I +TG +I I + L + + + G KA +I +L H+N S +
Sbjct: 135 IEQDTGTKITISALQDL--TVYNQERTISVRGGVEECCKAEGEIMKKLREAHENDVASVN 192
Query: 220 QHLLASAISNSHS----SSGSLVGPTAA-------TPIVGIAPLMGP--YGGYKGDTAGD 266
Q A N + SSG V P A+ TP +PL+GP GG G
Sbjct: 193 QQTNMMAGLNLSALGIFSSGMSVLPPASGLRGSLSTP-ANYSPLLGPSIMGGLYG-VPSS 250
Query: 267 WSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
+ SL A ++ + L P +G +IGK G I ++ +GA+IK+ + +
Sbjct: 251 GALSLQQA-----GGEQEVVYLFIPTPAVGALIGKKGQHIKELAHFAGASIKIAAPESPD 305
Query: 327 DDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRI 381
+ + + ++ EA + Q R K++ ++ + + VP++
Sbjct: 306 EPERMVI---------ITGPPEAQFKAQGRIYGKLKEENFFTAKEEVKLEAHIKVPSTAA 356
Query: 382 GCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
G +IGKGG + E++ LT A + I+P++ P DD V+I G ++ A
Sbjct: 357 GRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENDDVFVKIIGHFFASQTA 406
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSASD 97
G ++ VY ++ P +G++IG+ G+ +K+L + I+I P ER+V + +
Sbjct: 260 GEQEVVYLFI-PTPAVGALIGKKGQHIKELAHFAGASIKIAAPESPDEPERMV-IITGPP 317
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
E G + ++ F + V ++ A + VPS G VIGK
Sbjct: 318 EAQFKAQGRIYGKLKEENFFTAKEEV---------------KLEAHIKVPSTAAGRVIGK 362
Query: 158 GGQIVQNIRSETGAQIRILKDE 179
GG+ V +++ T A++ + +D+
Sbjct: 363 GGKTVNELQNLTSAEVIVPRDQ 384
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 13/165 (7%)
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG--DDCLITVSSKEFF 339
+E LR++ P +G +IGK G I I +++ + + + G + + SSKE
Sbjct: 27 QELPLRILVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGATEKAITIHSSKEGC 86
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGLI-SFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
+E + EK D+ ++ ++L S +G LIGK G + ++ +
Sbjct: 87 SQACRMILEIM--------EKEANDTKIVEEVPLKILAHNSLVGRLIGKEGRNLKKIEQD 138
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
T I I ++L + + + G ++ A ++M +LR
Sbjct: 139 TGTKITISALQDL--TVYNQERTISVRGGVEECCKAEGEIMKKLR 181
>gi|356535513|ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 136/282 (48%), Gaps = 30/282 (10%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSASDET 99
T R+L GS+IG+GG + + + ++I++ E PG+ +R++ V A +E
Sbjct: 36 TYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEI 95
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
Q A+ + ++++E L ++D+D + +L+VP+ G +IGKGG
Sbjct: 96 -------------QRAVELILSKLLSE-LHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGG 141
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+++ ++ A I+I ++ + ++D LV ++G +A+ I S+L ++P +
Sbjct: 142 ATIRSFIEDSQAGIKISPQDN--NYYGQNDRLVTLTGSFDEQMRAIELIVSKLSEDPHYA 199
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
Q ++++ S G P + P + P A ++ + + +
Sbjct: 200 Q-----SMNSPFSYPGVYFSGYQGVPYTYVLPSVAP----PAYNAVNYRPNGAAGGKLQN 250
Query: 280 SSKEFSLRLVCPVA--NIGGVIGKGGAIINQIRQESGAAIKV 319
S +E S L VA +IG V+G+GG I +I Q SGA IK+
Sbjct: 251 SKEERSNSLTMGVADEHIGLVVGRGGRNIMEISQASGARIKI 292
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
+P D K +R + + G VIGKGG+ I + +SGA I++ +
Sbjct: 26 SPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRN----------- 74
Query: 334 SSKEFFEDT------LSATIEAVVR-----LQPRCSEKIERDSGLISFTT--RLLVPTSR 380
EFF T +S I + R L SE D T RL+VP
Sbjct: 75 --HEFFPGTTDRIIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGS 132
Query: 381 IGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMT 440
G +IGKGG+ I ++A I+I P++N ++D +V ++G D A+ +++
Sbjct: 133 CGGIIGKGGATIRSFIEDSQAGIKISPQDN--NYYGQNDRLVTLTGSFDEQMRAIELIVS 190
Query: 441 RL 442
+L
Sbjct: 191 KL 192
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 66/213 (30%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVV 201
+ LV + G VIGKGG + + +S++GA+I++ ++ E P +D ++ +SG + +
Sbjct: 39 RFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGT---TDRIIMVSGAINEI 95
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
++A+ + +L+ +S HS
Sbjct: 96 QRAV--------------ELILSKLLSELHSED--------------------------- 114
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-- 319
D+ + + +RLV P + GG+IGKGGA I ++S A IK+
Sbjct: 115 ---------------DNDAEPKTKVRLVVPNGSCGGIIGKGGATIRSFIEDSQAGIKISP 159
Query: 320 -DSSSTEGDDCLITVSSKEFFEDTLSATIEAVV 351
D++ +D L+T++ F++ + A IE +V
Sbjct: 160 QDNNYYGQNDRLVTLTGS--FDEQMRA-IELIV 189
>gi|340722697|ref|XP_003399740.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 1 [Bombus terrestris]
Length = 627
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 198/429 (46%), Gaps = 58/429 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE-T 99
D R L +G+IIGR G ++Q+ T++++ + + G+ E+ +T+Y + T
Sbjct: 186 DFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENCT 245
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
NA + K + Q + + S G +++ ++L ++ IG +IGKGG
Sbjct: 246 NACK---KIMEVTQQEAYGL--------------SKG--EISLRILAHNNLIGRIIGKGG 286
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
++ I +T +I + + + L + ++ + G + KA I+S+L ++N
Sbjct: 287 TTIKKIMQDTDTKITVSSINDINNFNL--ERIITVKGSIDNMSKAESMISSKLRQSYEND 344
Query: 217 SRS---QHLLASAISNSHSSSGSLVGPTAATP-IVGIAPLMGPYGGYKGDTAGDWSRSLY 272
++ Q L+ + S + +G ++ P + G P PY T+ + +
Sbjct: 345 LQAMAPQSLMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPY-----QTSLPTQQGI- 398
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P D F L P ++G +IG G+ I I + SGA++K+ + E D +
Sbjct: 399 --PIGDTQETAF---LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKI--APIEQDKPVEQ 451
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCLIG 386
+ ++ T+ + E+ + Q EK+ R+ G + T +LVP++++G +IG
Sbjct: 452 QNDRKV---TIVGSPESQWKAQYLIFEKM-REEGFVGGTEDVRLTIEILVPSTQVGRIIG 507
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
KGG + E++R+T + I++ +++ A E + VQI G + A R+RA +
Sbjct: 508 KGGQNVRELQRVTGSIIKLSEQQSTSPSADE-EATVQIIGPFFSVQSA----QRRIRAMV 562
Query: 447 FDREGAVST 455
GA T
Sbjct: 563 LQSSGAPGT 571
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 29/172 (16%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T + Y+ P +G+IIG G ++ + + + ++I + V +R VT+
Sbjct: 404 QETAFLYI-PNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVG- 461
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---VTAKLLVPSDQIG 152
SP ++ +K +I E++R +E GG + +T ++LVPS Q+G
Sbjct: 462 --------------SP--ESQWKAQ-YLIFEKMR-EEGFVGGTEDVRLTIEILVPSTQVG 503
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
+IGKGGQ V+ ++ TG+ I+ L ++ S + + VQI G V+ A
Sbjct: 504 RIIGKGGQNVRELQRVTGSIIK-LSEQQSTSPSADEEATVQIIGPFFSVQSA 554
>gi|332215027|ref|XP_003256638.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Nomascus leucogenys]
Length = 599
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 180/399 (45%), Gaps = 51/399 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 352
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 353 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPH 412
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 413 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 470
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 471 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 523
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 524 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 558
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 425 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 483
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 484 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 528
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 529 GKTVNELQNLTSAEVIVPRDQ 549
>gi|148699887|gb|EDL31834.1| poly(rC) binding protein 3, isoform CRA_c [Mus musculus]
Length = 373
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 41/306 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 52 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 103
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 104 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 158
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL--- 222
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + +
Sbjct: 159 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 214
Query: 223 -------LASAISNSHSSSGSLVGPTA--------ATPIVGIAPLMGPYGGYKGDT---- 263
+ A +++ G P A PL + G+
Sbjct: 215 PKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLH 274
Query: 264 AGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
+ + +++L D S + L P IG +IG+ G IN+IRQ SGA IK+ ++
Sbjct: 275 SSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-AN 333
Query: 323 STEGDD 328
+TEG
Sbjct: 334 ATEGSS 339
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 41 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 93
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 94 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 133
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 134 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 160
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 161 STGAQVQV 168
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 49 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 96
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 97 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 156
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 157 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 208
Query: 452 AVSTFVP 458
A + P
Sbjct: 209 ATIPYRP 215
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T +L +P+D IGC+IG+ G + IR +GAQI+I + S+ + I+G +
Sbjct: 297 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-----ATEGSSERQITITGTPAN 351
Query: 201 VKKALCQIASRL 212
+ A I +RL
Sbjct: 352 ISLAQYLINARL 363
>gi|328787572|ref|XP_393878.3| PREDICTED: IGF-II mRNA-binding protein [Apis mellifera]
gi|380027404|ref|XP_003697415.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Apis florea]
Length = 626
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 195/426 (45%), Gaps = 58/426 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE-T 99
D R L +G+IIGR G ++Q+ T++++ + + G+ E+ +T+Y + T
Sbjct: 186 DFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENCT 245
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
NA + K + Q + + S G +++ ++L ++ IG +IGKGG
Sbjct: 246 NACK---KIMEVTQQEAYGL--------------SKG--EISLRILAHNNLIGRIIGKGG 286
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
++ I +T +I + + + L + ++ + G + KA I+++L ++N
Sbjct: 287 TTIKKIMQDTDTKITVSSINDINNFNL--ERIITVKGSIDNMSKAESMISNKLRQSYEND 344
Query: 217 SRS---QHLLASAISNSHSSSGSLVGPTAATP-IVGIAPLMGPYGGYKGDTAGDWSRSLY 272
++ Q L+ + S + +G ++ P + G P PY G
Sbjct: 345 LQAMAPQSLMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQASLPTQQG------- 397
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P D F L P ++G +IG G+ I I + SGA++K+ + E D +
Sbjct: 398 -IPIGDTQETAF---LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKI--APIEQDKPVDQ 451
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCLIG 386
+ ++ T+ + E+ + Q EK+ R+ G ++ T +LVP++++G +IG
Sbjct: 452 QNDRKV---TIVGSPESQWKAQYLIFEKM-REEGFVAGTEDVRLTIEILVPSTQVGRIIG 507
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
KGG + E++R+T + I++ +++ A E + VQI G + A R+RA +
Sbjct: 508 KGGQNVRELQRVTGSIIKLSEQQSTSPSADE-EATVQIIGPFFSVQSA----QRRIRAMV 562
Query: 447 FDREGA 452
GA
Sbjct: 563 LQSSGA 568
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 85/166 (51%), Gaps = 17/166 (10%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++T + Y+ P +G+IIG G ++ + + + ++I P +++ V D+ N
Sbjct: 404 QETAFLYI-PNTSVGAIIGSKGSHIRNIIRFSGASVKI---APIEQDKPV------DQQN 453
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV--TAKLLVPSDQIGCVIGKG 158
D + + ++ +K +I E++R + G V T ++LVPS Q+G +IGKG
Sbjct: 454 ---DRKVTIVGSPESQWKAQ-YLIFEKMREEGFVAGTEDVRLTIEILVPSTQVGRIIGKG 509
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
GQ V+ ++ TG+ I+ L ++ S + + VQI G V+ A
Sbjct: 510 GQNVRELQRVTGSIIK-LSEQQSTSPSADEEATVQIIGPFFSVQSA 554
>gi|71023653|ref|XP_762056.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
gi|46101621|gb|EAK86854.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
Length = 850
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 120/265 (45%), Gaps = 28/265 (10%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIG+ G+ + ++R + +++ I E +PG+ ER++TV D A
Sbjct: 561 IIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVSGPLD--------------AVSKA 606
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT + +VP+ ++G VIGK G ++ I+ +GA++
Sbjct: 607 FGLIVRRINDEPFDLASVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGARL-TA 665
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
+ LP ++ ++ ISG A V A+ + S L ++P R+ +N+ +
Sbjct: 666 GEAMLPGS---TERVLSISGVADAVHIAVYYVGSILLEHPDRN--------ANNLPYRPT 714
Query: 237 LVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
GP+ G P P GY AG + L + ++ P
Sbjct: 715 AGGPSTRAGAAGANPYAAPQQPFGYGAPAAGFGGAPAGAGGAPQLPPGSQTQQIFIPNDL 774
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
+G +IGKGG+ IN+IR S + IK+
Sbjct: 775 VGCIIGKGGSKINEIRSMSASHIKI 799
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 7/158 (4%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
+ + S+R + ++ +IGK G IN+IR +S A + + + ++TVS
Sbjct: 544 ATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVSGPL--- 600
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
D +S +VR + G S T R +VP SR+G +IGK GS I E++ +
Sbjct: 601 DAVSKAFGLIVRRINDEPFDLASVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASG 660
Query: 401 ANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
A R+ E + + + ++ ISG D A+ V
Sbjct: 661 A--RLTAGEAM--LPGSTERVLSISGVADAVHIAVYYV 694
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEAS 199
T ++ +P+D +GC+IGKGG + IRS + + I+I++ + +E LV I+G
Sbjct: 765 TQQIFIPNDLVGCIIGKGGSKINEIRSMSASHIKIMEPGAGIAAGGSGNERLVTITGPPP 824
Query: 200 VVKKALCQIASRLHDNPSR 218
++ A+ + RL R
Sbjct: 825 NIQMAVSLLYQRLEQEKMR 843
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 369 SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL-PKENLPKIASEDDEMVQISG- 426
S T ++ +P +GC+IGKGGS I E+R ++ ++I+I+ P + S ++ +V I+G
Sbjct: 763 SQTQQIFIPNDLVGCIIGKGGSKINEIRSMSASHIKIMEPGAGIAAGGSGNERLVTITGP 822
Query: 427 --DLDLAKDALIQVMTRLRANL 446
++ +A L Q + + + L
Sbjct: 823 PPNIQMAVSLLYQRLEQEKMRL 844
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 37 IIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSA 95
+ G + R++ P ++GS+IG+ G +K+++ + +++ GE +PGS ERV+++
Sbjct: 624 VPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGARLTAGEAMLPGSTERVLSISGV 683
Query: 96 SD 97
+D
Sbjct: 684 AD 685
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 130 GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSD 189
GD Q++ + L+ + +IGK G+ + IR ++ A++ I E +P +
Sbjct: 537 GDSSETQATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNI--SEIIPG---NPE 591
Query: 190 ELVQISGEASVVKKALCQIASRLHDNP 216
++ +SG V KA I R++D P
Sbjct: 592 RILTVSGPLDAVSKAFGLIVRRINDEP 618
>gi|426343191|ref|XP_004038198.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Gorilla gorilla gorilla]
Length = 376
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 175/389 (44%), Gaps = 73/389 (18%)
Query: 54 IGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNAFEDGDKFVSPA 112
+G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 25 VGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS------------ 72
Query: 113 QDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
+A R+I E ++ + D ++ K+L + +G +IGK G+ ++ I ETG
Sbjct: 73 -EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGT 126
Query: 172 QIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSH 231
+I I + L + + + G A +I +L + + +LA N+H
Sbjct: 127 KITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLRE--AFENDMLAV---NTH 179
Query: 232 SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCP 291
S S + P GP+ + +S P ++ + L P
Sbjct: 180 SGYFSSLYPHHQ---------FGPFPHH------------HSYPEQEI------VNLFIP 212
Query: 292 VANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVV 351
+G +IGK GA I Q+ + +GA+IK+ + EG D VS + ++ EA
Sbjct: 213 TQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI---ITGPPEAQF 263
Query: 352 RLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
+ Q R K++ ++ + + VP+S G +IGKGG + E++ LT A + I+
Sbjct: 264 KAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IV 322
Query: 407 PKENLPKIASEDDE-MVQISGDLDLAKDA 434
P++ P E++E +V+I G ++ A
Sbjct: 323 PRDQTP---DENEEVIVRIIGHFFASQTA 348
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 202 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 260
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 261 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 305
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 306 GKTVNELQNLTSAEVIVPRDQ 326
>gi|340722699|ref|XP_003399741.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Bombus terrestris]
Length = 577
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 198/429 (46%), Gaps = 58/429 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE-T 99
D R L +G+IIGR G ++Q+ T++++ + + G+ E+ +T+Y + T
Sbjct: 136 DFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENCT 195
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
NA + K + Q + + S G +++ ++L ++ IG +IGKGG
Sbjct: 196 NACK---KIMEVTQQEAYGL--------------SKG--EISLRILAHNNLIGRIIGKGG 236
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
++ I +T +I + + + L + ++ + G + KA I+S+L ++N
Sbjct: 237 TTIKKIMQDTDTKITVSSINDINNFNL--ERIITVKGSIDNMSKAESMISSKLRQSYEND 294
Query: 217 SRS---QHLLASAISNSHSSSGSLVGPTAATP-IVGIAPLMGPYGGYKGDTAGDWSRSLY 272
++ Q L+ + S + +G ++ P + G P PY T+ + +
Sbjct: 295 LQAMAPQSLMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPY-----QTSLPTQQGI- 348
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P D F L P ++G +IG G+ I I + SGA++K+ + E D +
Sbjct: 349 --PIGDTQETAF---LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKI--APIEQDKPVEQ 401
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCLIG 386
+ ++ T+ + E+ + Q EK+ R+ G + T +LVP++++G +IG
Sbjct: 402 QNDRKV---TIVGSPESQWKAQYLIFEKM-REEGFVGGTEDVRLTIEILVPSTQVGRIIG 457
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
KGG + E++R+T + I++ +++ A E + VQI G + A R+RA +
Sbjct: 458 KGGQNVRELQRVTGSIIKLSEQQSTSPSADE-EATVQIIGPFFSVQSA----QRRIRAMV 512
Query: 447 FDREGAVST 455
GA T
Sbjct: 513 LQSSGAPGT 521
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 29/172 (16%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T + Y+ P +G+IIG G ++ + + + ++I + V +R VT+
Sbjct: 354 QETAFLYI-PNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVG- 411
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---VTAKLLVPSDQIG 152
SP ++ +K +I E++R +E GG + +T ++LVPS Q+G
Sbjct: 412 --------------SP--ESQWKAQ-YLIFEKMR-EEGFVGGTEDVRLTIEILVPSTQVG 453
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
+IGKGGQ V+ ++ TG+ I+ L ++ S + + VQI G V+ A
Sbjct: 454 RIIGKGGQNVRELQRVTGSIIK-LSEQQSTSPSADEEATVQIIGPFFSVQSA 504
>gi|334350025|ref|XP_003342306.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
gi|444513888|gb|ELV10473.1| Poly(rC)-binding protein 2 [Tupaia chinensis]
Length = 307
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 144/307 (46%), Gaps = 50/307 (16%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIAPLMGPYGGYKGDTAGDW 267
S + A +++ G P T + +A + G+T +
Sbjct: 173 GVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTG--F 230
Query: 268 SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
S L D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 231 SAGL------DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGST 284
Query: 328 DCLITVS 334
D +T++
Sbjct: 285 DRQVTIT 291
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|355559801|gb|EHH16529.1| hypothetical protein EGK_11818, partial [Macaca mulatta]
Length = 542
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 184/412 (44%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 136 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 195
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 196 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 237
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 238 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 295
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 296 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPH 355
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 356 HQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 413
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ + + + VP+S G
Sbjct: 414 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEEKFFTPKEEVKLEAHIRVPSSTAGR 466
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 467 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 514
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE V P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 368 PEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 426
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 427 AQFKAQGRIFGKLKEEKFFTPKEEV---------------KLEAHIRVPSSTAGRVIGKG 471
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 472 GKTVNELQNLTSAEVIVPRDQ 492
>gi|397470077|ref|XP_003806660.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Pan paniscus]
gi|179479906|gb|ACB86626.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 536
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 185/412 (44%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 130 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 189
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 190 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 231
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 232 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 289
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 290 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSSLYPH 349
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 350 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 407
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 408 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 460
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 461 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 508
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 362 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 420
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 421 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 465
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 466 GKTVNELQNLTSAEVIVPRDQ 486
>gi|301759723|ref|XP_002915742.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Ailuropoda melanoleuca]
Length = 599
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 182/404 (45%), Gaps = 61/404 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLREAFEND 352
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A AP P+ + G +
Sbjct: 353 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSG-----YFS 407
Query: 270 SLYSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
SLY P ++ + L P +G +IGK GA I Q+ + +GA+IK+ +
Sbjct: 408 SLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--AP 465
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPT 378
EG D VS + ++ EA + Q R K++ ++ + + VP+
Sbjct: 466 AEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPS 518
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
S G +IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 519 STAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 558
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 425 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 483
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 484 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 528
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 529 GKTVNELQNLTSAEVIVPRDQ 549
>gi|363747267|ref|XP_423701.3| PREDICTED: poly(rC)-binding protein 2-like isoform 4 [Gallus
gallus]
Length = 307
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 144/307 (46%), Gaps = 50/307 (16%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIAPLMGPYGGYKGDTAGDW 267
S + A +++ G P T + +A + G+T +
Sbjct: 173 GVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTG--F 230
Query: 268 SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
S L D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 231 SAGL------DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGST 284
Query: 328 DCLITVS 334
D +T++
Sbjct: 285 DRQVTIT 291
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|426218395|ref|XP_004003432.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Ovis aries]
Length = 345
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 138/290 (47%), Gaps = 34/290 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLHDNPSRSQHLLA 224
R TGAQ+++ D LP+ R+ V ISG + + + QI L + Q+ +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIP 211
Query: 225 SA-ISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDT----AGDWSRSLYSAPRD-D 278
++ H + TP PL + G+ + + +++L D
Sbjct: 212 HPDLTKLHQLA------MQQTP---FPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLD 262
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
S + L P IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 263 ASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-ANATEGSS 311
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 48/209 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET----- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 133 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVK 192
Query: 100 -------NAFEDGDKFVSPAQDALFKVHDRVI---------------------------A 125
A+ ++ P D L K+H + A
Sbjct: 193 QICVVMLEAYTIQGQYAIPHPD-LTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 251
Query: 126 EELRGDEDS-DGGHQV-TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPS 183
+ L G D T +L +P+D IGC+IG+ G + IR +GAQI+I +
Sbjct: 252 QNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-----A 306
Query: 184 CALRSDELVQISGEASVVKKALCQIASRL 212
S+ + I+G + + A I +RL
Sbjct: 307 TEGSSERQITITGTPANISLAQYLINARL 335
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 30/169 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
E+R T A +++ + LP + + V ISG DA+IQ + ++
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQI 194
>gi|351705765|gb|EHB08684.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Heterocephalus
glaber]
Length = 546
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 185/406 (45%), Gaps = 65/406 (16%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 110 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 169
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 170 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 212
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 213 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSVETCAKAEEEIMKKIRESYEN 270
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 271 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 315
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 316 QFEQSETE-TVHLFIPAPSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 371
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 372 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 425
Query: 391 I-------ITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
+ E++ L+ A + ++P++ P E+D+ +V+I+G
Sbjct: 426 TASTSAKPVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHF 467
>gi|193083114|ref|NP_001122386.1| poly(rC)-binding protein 2 isoform g [Homo sapiens]
gi|73996231|ref|XP_857798.1| PREDICTED: poly(rC)-binding protein 2 isoform 15 [Canis lupus
familiaris]
gi|291389261|ref|XP_002711067.1| PREDICTED: poly(rC) binding protein 2-like isoform 4 [Oryctolagus
cuniculus]
gi|338726296|ref|XP_003365293.1| PREDICTED: poly(rC)-binding protein 2 [Equus caballus]
gi|426224374|ref|XP_004006346.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Ovis aries]
gi|119617117|gb|EAW96711.1| poly(rC) binding protein 2, isoform CRA_f [Homo sapiens]
Length = 318
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 144/307 (46%), Gaps = 50/307 (16%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIAPLMGPYGGYKGDTAGDW 267
S + A +++ G P T + +A + G+T +
Sbjct: 173 GVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTG--F 230
Query: 268 SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
S L D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 231 SAGL------DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGST 284
Query: 328 DCLITVS 334
D +T++
Sbjct: 285 DRQVTIT 291
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|350591798|ref|XP_003483335.1| PREDICTED: replication factor C (activator 1) 4, 37kDa [Sus scrofa]
Length = 578
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 187/417 (44%), Gaps = 62/417 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 172 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 231
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 232 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 273
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 274 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEIEIMKKLREAFEND 331
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A AP P+ + G +
Sbjct: 332 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSG-----YFS 386
Query: 270 SLYSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
SLY P ++ + L P +G +IGK GA I Q+ + +GA+IK+ +
Sbjct: 387 SLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--AP 444
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPT 378
EG D VS + ++ EA + Q R K++ ++ + + VP+
Sbjct: 445 AEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPS 497
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
S G +IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 498 STAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 550
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 404 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 462
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 463 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 507
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 508 GKTVNELQNLTSAEVIVPRDQ 528
>gi|164655395|ref|XP_001728827.1| hypothetical protein MGL_3994 [Malassezia globosa CBS 7966]
gi|159102713|gb|EDP41613.1| hypothetical protein MGL_3994 [Malassezia globosa CBS 7966]
Length = 382
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 130/281 (46%), Gaps = 33/281 (11%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P V R L IIG+ G + ++R + +++ I E++P + ER++TV A D
Sbjct: 82 PGPIVMRALIITSDASVIIGKQGRHINEIRELSNARLNISESIPSNPERILTVSGALD-- 139
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
A F + R I +E G + + ++P+ ++G +IG+ G
Sbjct: 140 ------------AVSKAFGLLVRRINDEPFDQPSLPGSRAASIRFIIPNSRMGAIIGRQG 187
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR- 218
++ I+ +GA++ + LP ++ ++ I+G A + A+ + + L ++P R
Sbjct: 188 SKIKEIQEASGARLHA-GETMLPGS---TERILSITGVADALHIAVYYVGATLLEHPDRG 243
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
S +L + + + + SLVG +PL P +A + ++L S
Sbjct: 244 SNNLPYRPAAVNRALTPSLVG----------SPLNSPSASMLALSATNSPKALASVLTPG 293
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
L +++ + P +G +IGKGG IN+IRQ S + IK+
Sbjct: 294 LQTQQ----IFIPNDLVGCIIGKGGQKINEIRQLSASHIKI 330
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 104/231 (45%), Gaps = 38/231 (16%)
Query: 26 RRYTGDDRDQ-FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VP 83
RR + DQ + G R++ P ++G+IIGR G +K+++ + +++ GET +P
Sbjct: 150 RRINDEPFDQPSLPGSRAASIRFIIPNSRMGAIIGRQGSKIKEIQEASGARLHAGETMLP 209
Query: 84 GSEERVVTVYSASDE---------TNAFEDGDKFVS--PAQDALFKVHDRVIAEELRGDE 132
GS ER++++ +D E D+ + P + A +R + L G
Sbjct: 210 GSTERILSITGVADALHIAVYYVGATLLEHPDRGSNNLPYRPAAV---NRALTPSLVGSP 266
Query: 133 DSDGGHQV---------------------TAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
+ + T ++ +P+D +GC+IGKGGQ + IR + +
Sbjct: 267 LNSPSASMLALSATNSPKALASVLTPGLQTQQIFIPNDLVGCIIGKGGQKINEIRQLSAS 326
Query: 172 QIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
I+I+ ++ + + S+ LV I+G ++ A+ + RL R H
Sbjct: 327 HIKIMERNAGIAAGGSGSERLVTITGPPPNIQMAVTLLYQRLEQEKMRLAH 377
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IGK G IN+IR+ S A + + S + ++TVS D +S +VR R
Sbjct: 99 IIGKQGRHINEIRELSNARLNISESIPSNPERILTVSGAL---DAVSKAFGLLVR---RI 152
Query: 358 S-EKIERDS--GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIR 404
+ E ++ S G + + R ++P SR+G +IG+ GS I E++ + A +
Sbjct: 153 NDEPFDQPSLPGSRAASIRFIIPNSRMGAIIGRQGSKIKEIQEASGARLH 202
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKE-NLPKIASEDDEMVQISG--- 426
T ++ +P +GC+IGKGG I E+R+L+ ++I+I+ + + S + +V I+G
Sbjct: 296 TQQIFIPNDLVGCIIGKGGQKINEIRQLSASHIKIMERNAGIAAGGSGSERLVTITGPPP 355
Query: 427 DLDLAKDALIQVMTRLRANLFDREGAV 453
++ +A L Q + + + L A+
Sbjct: 356 NIQMAVTLLYQRLEQEKMRLAHSSPAI 382
>gi|440899520|gb|ELR50813.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Bos grunniens
mutus]
Length = 597
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 182/404 (45%), Gaps = 61/404 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 191 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 250
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 251 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 292
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 293 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEIEIMKKLREAFEND 350
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A AP P+ + G +
Sbjct: 351 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSG-----YFS 405
Query: 270 SLYSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
SLY P ++ + L P +G +IGK GA I Q+ + +GA+IK+ +
Sbjct: 406 SLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--AP 463
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPT 378
EG D VS + ++ EA + Q R K++ ++ + + VP+
Sbjct: 464 AEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPS 516
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
S G +IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 517 STAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 556
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 423 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 481
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 482 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 526
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 527 GKTVNELQNLTSAEVIVPRDQ 547
>gi|269784927|ref|NP_001161615.1| NOVA-like protein [Saccoglossus kowalevskii]
gi|268054231|gb|ACY92602.1| NOVA-like protein [Saccoglossus kowalevskii]
Length = 516
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 122/256 (47%), Gaps = 50/256 (19%)
Query: 23 PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET- 81
P + G+D +++I+ + L P GS+IG+GG+ V QL+ +T + I++ ++
Sbjct: 33 PKRTNIGGNDDNKYIL-------KMLIPSAAAGSVIGKGGQTVVQLQRETGANIKLSKSN 85
Query: 82 --VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDS---DG 136
PG+ ERVV + + A + FV + KV D G+E + +
Sbjct: 86 DYYPGTSERVVLITGTVESLTAVGN---FV------IEKVRDSPQLAAKTGNESAVSQER 136
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
QV K+++P+ G +IGKGG ++ +TG++++I + + S+ ++ ISG
Sbjct: 137 ARQV--KIIIPNSTAGLIIGKGGATIKAFMEQTGSKLQISQKSEGVNL---SERVLTISG 191
Query: 197 EASVVKKALCQIASRLHDNPSR------SQHLLASAISNS------HSSSGSLV------ 238
E KKA+ + S++ ++P S ++ I+N+ + +G LV
Sbjct: 192 EGDANKKAMNAVISKVQEDPQSGSCNNISYAAVSGPIANASPTGSPFAEAGGLVNVKQPQ 251
Query: 239 -----GPTAATPIVGI 249
GPTA P +G+
Sbjct: 252 MSLHTGPTAGMPTMGV 267
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 23/175 (13%)
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFED 341
++ L+++ P A G VIGKGG + Q+++E+GA IK+ S +D S +
Sbjct: 44 NKYILKMLIPSAAAGSVIGKGGQTVVQLQRETGANIKLSKS----NDYYPGTSERVVL-- 97
Query: 342 TLSATIEAV----------VRLQPRCSEKIERDSGLISFTTR---LLVPTSRIGCLIGKG 388
++ T+E++ VR P+ + K +S + R +++P S G +IGKG
Sbjct: 98 -ITGTVESLTAVGNFVIEKVRDSPQLAAKTGNESAVSQERARQVKIIIPNSTAGLIIGKG 156
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ I T + ++I K ++ + ++ ISG+ D K A+ V+++++
Sbjct: 157 GATIKAFMEQTGSKLQISQKSEGVNLS---ERVLTISGEGDANKKAMNAVISKVQ 208
>gi|158293685|ref|XP_557579.3| AGAP004942-PA [Anopheles gambiae str. PEST]
gi|157016566|gb|EAL40201.3| AGAP004942-PA [Anopheles gambiae str. PEST]
Length = 382
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 141/318 (44%), Gaps = 73/318 (22%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSP 111
+++GSIIG+ GEIVK+ R ++ +KI I + ER+VTV S
Sbjct: 31 KEVGSIIGKKGEIVKRFREESGAKINISDC--SCPERIVTV-----------------SG 71
Query: 112 AQDALFKVHDRVIAE------ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
++ A++K + + + + + ++ G Q+ +L+VP+ Q G +IGKGG ++ I
Sbjct: 72 SRSAIYKAFTLITKKFEEWCSQFQDNANTQGKPQIPIRLIVPASQCGSLIGKGGSKIKEI 131
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL--- 222
R TG I++ E LP+ R+ V +SG A + + + I + ++P + +
Sbjct: 132 REITGCSIQV-ASEMLPNSTERA---VTLSGSAEAITQCIYHICCVMLESPPKGATIPYR 187
Query: 223 --------LASAISNSHSSSGSLVGPTAATPIVGIA--PL------------------MG 254
+ A +++ G+ P A + GIA PL +
Sbjct: 188 PKPQVNGPVIVANGQAYTIQGNYAVP--AQEVSGIAKNPLAGLAALGLAGAIPSNTGGLN 245
Query: 255 PYGGYKGDTAGDW-----------SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGG 303
P G Y A ++ S+ + R+ + S + P IG +IGKGG
Sbjct: 246 PTGKYSSPNALEYIPHAALAALAGSQLRTNNNRNVAPVQSQSHEMTVPNDLIGCIIGKGG 305
Query: 304 AIINQIRQESGAAIKVDS 321
I +IRQ SGA I++ +
Sbjct: 306 TKIAEIRQISGAMIRISN 323
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 12/158 (7%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS-SKEFFEDT 342
++RL+ +G +IGK G I+ + R+ESGA I + S + ++TVS S+
Sbjct: 22 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDCSC--PERIVTVSGSRSAIYKA 79
Query: 343 LSATIEAVVRLQPRCSEKIERDS--GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
+ + + + CS+ + + G RL+VP S+ G LIGKGGS I E+R +T
Sbjct: 80 FTLITK---KFEEWCSQFQDNANTQGKPQIPIRLIVPASQCGSLIGKGGSKIKEIREITG 136
Query: 401 ANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
+I++ E LP + + V +SG + + +
Sbjct: 137 CSIQVA-SEMLP---NSTERAVTLSGSAEAITQCIYHI 170
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 369 SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL 428
S + + VP IGC+IGKGG+ I E+R+++ A IRI E + + D + I+G+
Sbjct: 285 SQSHEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--RDSGNTDRTITITGNP 342
Query: 429 DLAKDALIQVMTRLRANL 446
D AL Q + +R ++
Sbjct: 343 DSV--ALAQYLINMRISM 358
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
D +T +L++ ++G +IGK G+IV+ R E+GA+I I D P + +V +
Sbjct: 17 DPAVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDCSCP------ERIVTV 69
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQ 220
SG S + KA I + + S+ Q
Sbjct: 70 SGSRSAIYKAFTLITKKFEEWCSQFQ 95
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
++ VP+D IGC+IGKGG + IR +GA IRI E S +D + I+G V
Sbjct: 289 EMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERDSG--NTDRTITITGNPDSVA 346
Query: 203 KALCQIASRL 212
A I R+
Sbjct: 347 LAQYLINMRI 356
>gi|4191610|gb|AAD09827.1| IGF-II mRNA-binding protein 2 [Homo sapiens]
gi|18204201|gb|AAH21290.1| Insulin-like growth factor 2 mRNA binding protein 2 [Homo sapiens]
gi|123982692|gb|ABM83087.1| insulin-like growth factor 2 mRNA binding protein 2 [synthetic
construct]
gi|157928388|gb|ABW03490.1| insulin-like growth factor 2 mRNA binding protein 2 [synthetic
construct]
Length = 598
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 179/399 (44%), Gaps = 51/399 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 192 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 251
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 252 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 293
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 294 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 351
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 352 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSSLYPH 411
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 412 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 469
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 470 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 522
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 523 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 557
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 424 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 482
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 483 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 527
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 528 GKTVNELQNLTSAEVIVPRDQ 548
>gi|345796405|ref|XP_535832.3| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2
isoform 2 [Canis lupus familiaris]
Length = 531
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 187/417 (44%), Gaps = 62/417 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 125 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 184
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 185 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 226
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 227 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLREAFEND 284
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A AP P+ + G +
Sbjct: 285 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSG-----YFS 339
Query: 270 SLYSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
SLY P ++ + L P +G +IGK GA I Q+ + +GA+IK+ +
Sbjct: 340 SLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--AP 397
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPT 378
EG D VS + ++ EA + Q R K++ ++ + + VP+
Sbjct: 398 AEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPS 450
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
S G +IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 451 STAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 503
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 357 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 415
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 416 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 460
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 461 GKTVNELQNLTSAEVIVPRDQ 481
>gi|327263854|ref|XP_003216732.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Anolis
carolinensis]
Length = 331
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 146/319 (45%), Gaps = 61/319 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIA------PLMGPYGGYKG 261
S + A +++ G P T + +A P+ G+ G
Sbjct: 173 GVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSG 232
Query: 262 ------DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGA 315
D G W+ D S++ S L P IG +IG+ GA IN+IRQ SGA
Sbjct: 233 VESSSPDEKGYWAGL-------DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGA 285
Query: 316 AIKVDSSSTEGDDCLITVS 334
IK+ + D +T++
Sbjct: 286 QIKIANPVEGSTDRQVTIT 304
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS +SS V
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNSTASSRPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LRLV P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|392337608|ref|XP_001075246.3| PREDICTED: RNA-binding protein Nova-2 [Rattus norvegicus]
Length = 560
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 24/232 (10%)
Query: 24 NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 107 TKRINTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 158
Query: 82 -VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQ 139
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 159 FYPGTTERVCLVQGTAEALNA---AHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRA 215
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 216 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPE 272
Query: 200 VVKKALCQIASRLHDNPSRSQHL------LASAISNSHSSSGSLVGPTAATP 245
V KA+ I ++ ++P S L +A ++NS+ + P P
Sbjct: 273 QVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLP 324
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 88/178 (49%), Gaps = 25/178 (14%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSK- 336
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 117 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 176
Query: 337 -----EFFEDTLSATIEAVVR------LQPRCSEKIERDSGLISFTTRLLVPTSRIGCLI 385
F + + +A+ + LQP+ + +R +L+VP S G +I
Sbjct: 177 LNAAHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 231
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
GKGG+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 232 GKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 286
>gi|281354032|gb|EFB29616.1| hypothetical protein PANDA_003725 [Ailuropoda melanoleuca]
Length = 434
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 181/404 (44%), Gaps = 61/404 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 58 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 117
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 118 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 159
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 160 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLREAFEND 217
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A AP P+ + G +
Sbjct: 218 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSG-----YFS 272
Query: 270 SLYSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
SLY P ++ + L P +G +IGK GA I Q+ + +GA+IK+ +
Sbjct: 273 SLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--AP 330
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPT 378
EG D VS + ++ EA + Q R K++ ++ + + VP+
Sbjct: 331 AEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPS 383
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
S G +IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 384 STAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 423
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 290 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 348
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 349 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 393
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 394 GKTVNELQNLTSAEVIVPRDQ 414
>gi|432906521|ref|XP_004077571.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 434
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 134/303 (44%), Gaps = 52/303 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E S ER+VT+ ++ F
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SSPERIVTITGPTE--GIFR-- 73
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F AQ K + + A + S VT +L+ P Q G +IGKGG ++ I
Sbjct: 74 -AFSMIAQ----KFEEDITAAMTNSNVTSKP--PVTLRLVFPGSQCGSLIGKGGSKIKEI 126
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLL-- 223
R TGAQ+++ D LP R+ V ISG + + + I S + ++P + +
Sbjct: 127 RETTGAQVQVAGD-MLPDSTERA---VTISGTPQAITQCVRHICSVMLESPPKGATIPYR 182
Query: 224 -------ASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
A A+ S+ + P G Y D ++ P
Sbjct: 183 PKILPAGAHAVLAPQHSAHAFAIP-------------GQYAFAHQDLTKLHQLAMQHIPL 229
Query: 277 DDL------------SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
L S+ + L P IG +IG+ G+ IN+IRQ SGA IK+ +S+T
Sbjct: 230 PSLGQSNPTFPGLDSSASTSTQELAIPNDLIGCIIGRQGSKINEIRQVSGAHIKI-ASAT 288
Query: 325 EGD 327
+G
Sbjct: 289 DGS 291
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----------TEGDDCLIT 332
+LRL+ +G +IGK G + ++R+ESGA I + S TEG +
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSSPERIVTITGPTEGIFRAFS 76
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ +++F ED +A + V +P T RL+ P S+ G LIGKGGS I
Sbjct: 77 MIAQKFEEDITAAMTNSNVTSKP-------------PVTLRLVFPGSQCGSLIGKGGSKI 123
Query: 393 TEMRRLTKANIRI 405
E+R T A +++
Sbjct: 124 KEIRETTGAQVQV 136
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
SDG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I S + +
Sbjct: 9 SDGSLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINI-------SEGSSPERI 61
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + +A IA + ++ + +A++NS+ +S V
Sbjct: 62 VTITGPTEGIFRAFSMIAQKFEED-------ITAAMTNSNVTSKPPV------------- 101
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 102 ---------------------------------TLRLVFPGSQCGSLIGKGGSKIKEIRE 128
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 129 TTGAQVQV 136
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 364 DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
DS + T L +P IGC+IG+ GS I E+R+++ A+I+I
Sbjct: 243 DSSASTSTQELAIPNDLIGCIIGRQGSKINEIRQVSGAHIKI 284
>gi|64085377|ref|NP_006539.3| insulin-like growth factor 2 mRNA-binding protein 2 isoform a [Homo
sapiens]
gi|224471831|sp|Q9Y6M1.2|IF2B2_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=Hepatocellular carcinoma autoantigen p62; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|119598617|gb|EAW78211.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_c
[Homo sapiens]
gi|158254760|dbj|BAF83353.1| unnamed protein product [Homo sapiens]
gi|410223074|gb|JAA08756.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410251296|gb|JAA13615.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410302886|gb|JAA30043.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410342487|gb|JAA40190.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
Length = 599
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 180/399 (45%), Gaps = 51/399 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 352
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 353 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSSLYPH 412
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 413 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 470
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 471 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 523
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 524 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 558
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 425 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 483
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 484 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 528
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 529 GKTVNELQNLTSAEVIVPRDQ 549
>gi|307110043|gb|EFN58280.1| hypothetical protein CHLNCDRAFT_142255 [Chlorella variabilis]
Length = 306
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 93/177 (52%), Gaps = 10/177 (5%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P +TVYR + + IIGRGG V+Q+ T +++ + PG+ E+VV V++++ E
Sbjct: 101 PRETVYRLVLDVVDTALIIGRGGNTVRQIEQTTGGRVKRLQEPPGAREQVVVVWNSAREL 160
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+ G + AQ+AL RV+ + E++ G ++A+LL+ Q V+
Sbjct: 161 PS--PGRMARNTAQEALVDCVRRVVFQ-----ENAPMGQPMSARLLISRTQEAGVMDNMN 213
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
IV G I + + + LP+CAL +D LV++SGE + A+ ++ L ++P
Sbjct: 214 AIVAE---NPGISIELKRAQELPACALDNDVLVELSGEKYSLLAAVEALSHVLREHP 267
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 16/195 (8%)
Query: 257 GGYKGDTAG---DWSRSLYSAPRDDLS-SKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
G Y+G AG D R + P S +E RLV V + +IG+GG + QI Q
Sbjct: 73 GSYQGTAAGYATDAKRQHVAPPLTPASVPRETVYRLVLDVVDTALIIGRGGNTVRQIEQT 132
Query: 313 SGAAIKVDSSSTEGDDCLITV--SSKEFFEDTLSA---TIEAVVRLQPRCSEKIERDSGL 367
+G +K + ++ V S++E A EA+V R + G
Sbjct: 133 TGGRVKRLQEPPGAREQVVVVWNSARELPSPGRMARNTAQEALVDCVRRVVFQENAPMGQ 192
Query: 368 ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD 427
+ RLL+ ++ ++ +I+ E ++ I + + LP A ++D +V++SG+
Sbjct: 193 -PMSARLLISRTQEAGVMDNMNAIVAENPGIS---IELKRAQELPACALDNDVLVELSGE 248
Query: 428 ---LDLAKDALIQVM 439
L A +AL V+
Sbjct: 249 KYSLLAAVEALSHVL 263
>gi|189237154|ref|XP_973939.2| PREDICTED: similar to igf2 mRNA binding protein, putative
[Tribolium castaneum]
Length = 1116
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 182/419 (43%), Gaps = 76/419 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE-T 99
D R L +G+IIGR G ++Q+ T++++ + + GS E+ +T+Y + T
Sbjct: 129 DFPLRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDNVGSLEKAITIYGNPENCT 188
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGG------HQVTAKLLVPSDQIGC 153
NA + R++ + +++ G +++ K+L ++ IG
Sbjct: 189 NACK------------------RILEVMQQEANNTNKGYAKKYYYEICLKILAHNNLIGR 230
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL- 212
+IGKGG ++ I ET +I + + S L + ++ + G + +A QI+++L
Sbjct: 231 IIGKGGNTIKRIMQETDTKITVSSINDINSFNL--ERIITVKGAIDNMSRAEAQISAKLR 288
Query: 213 --HDNPSRS---QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDW 267
++N ++ Q ++ + + + +G + G AP G Y GD
Sbjct: 289 QSYENDLQAMAPQTMMFPGLHPMAMMATAGIGYGSRGLYTGQAPYPGMYPAGAAQGGGDS 348
Query: 268 SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV------DS 321
+ Y L P +G +IG G+ I I + SGA++K+
Sbjct: 349 QETTY---------------LYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKP 393
Query: 322 SSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLL 375
T+ + + V S EA + Q EK+ R+ G ++ T ++
Sbjct: 394 QETQNERRVTIVGSP-----------EAQWKAQYLIFEKM-REEGFVAGSDDVRLTVEIM 441
Query: 376 VPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
VP+S++G +IGKGG + E++R+T + I++ + P+ ED+ V I G + A
Sbjct: 442 VPSSQVGRIIGKGGQNVRELQRVTGSVIKLPEQGASPQ---EDETTVHIIGPFFSVQSA 497
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 28/143 (19%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPG---SEERVVTVYS 94
++T Y Y+ P +G+IIG G ++ + + + ++I ET P +E RV V S
Sbjct: 349 QETTYLYI-PNNAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQETQNERRVTIVGS 407
Query: 95 ASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV--TAKLLVPSDQIG 152
+ A +I E++R + G V T +++VPS Q+G
Sbjct: 408 PEAQWKA-------------------QYLIFEKMREEGFVAGSDDVRLTVEIMVPSSQVG 448
Query: 153 CVIGKGGQIVQNIRSETGAQIRI 175
+IGKGGQ V+ ++ TG+ I++
Sbjct: 449 RIIGKGGQNVRELQRVTGSVIKL 471
>gi|332818640|ref|XP_001151234.2| PREDICTED: LOW QUALITY PROTEIN: insulin-like growth factor 2 mRNA
binding protein 2 isoform 7 [Pan troglodytes]
Length = 599
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 180/399 (45%), Gaps = 51/399 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 352
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 353 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSSLYPH 412
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 413 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 470
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 471 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 523
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 524 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 558
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 425 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 483
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 484 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 528
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 529 GKTVNELQNLTSAEVIVPRDQ 549
>gi|334350022|ref|XP_003342305.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
Length = 320
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 145/313 (46%), Gaps = 49/313 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIA------PLMGPYGGYKG 261
S + A +++ G P T + +A P+ G+ G
Sbjct: 173 GVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSG 232
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+ Y A D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 233 IESSSPEVKGYWAGLDA-SAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN 291
Query: 322 SSTEGDDCLITVS 334
D +T++
Sbjct: 292 PVEGSTDRQVTIT 304
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 86/218 (39%), Gaps = 64/218 (29%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY----------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 101 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVK 160
Query: 94 --------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRVIAEE- 127
S F G + Q A L K+H + +
Sbjct: 161 QICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSH 220
Query: 128 ---------LRGDEDS-----------DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIR 166
G E S D Q T+ +L +P+D IGC+IG+ G + IR
Sbjct: 221 FPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIR 280
Query: 167 SETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
+GAQI+I +D V I+G A+ + A
Sbjct: 281 QMSGAQIKIANP-----VEGSTDRQVTITGSAASISLA 313
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|300795407|ref|NP_001179433.1| insulin-like growth factor 2 mRNA-binding protein 2 [Bos taurus]
gi|296491332|tpg|DAA33395.1| TPA: insulin-like growth factor 2 mRNA binding protein 2 isoform 1
[Bos taurus]
Length = 599
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 182/404 (45%), Gaps = 61/404 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEIEIMKKLREAFEND 352
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A AP P+ + G +
Sbjct: 353 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSG-----YFS 407
Query: 270 SLYSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
SLY P ++ + L P +G +IGK GA I Q+ + +GA+IK+ +
Sbjct: 408 SLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--AP 465
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPT 378
EG D VS + ++ EA + Q R K++ ++ + + VP+
Sbjct: 466 AEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPS 518
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
S G +IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 519 STAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 558
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 425 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 483
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 484 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 528
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 529 GKTVNELQNLTSAEVIVPRDQ 549
>gi|281353861|gb|EFB29445.1| hypothetical protein PANDA_010268 [Ailuropoda melanoleuca]
Length = 596
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 197/436 (45%), Gaps = 78/436 (17%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 454
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 455 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 508
Query: 391 I-----------------ITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---D 429
+ E++ L+ A + ++P++ P E+D+ +V+I+G
Sbjct: 509 TASTSAKPVQWTCVYLVQVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQ 564
Query: 430 LAKDALIQVMTRLRAN 445
+A+ + +++T+++ +
Sbjct: 565 VAQRKIQEILTQVKQH 580
>gi|403270472|ref|XP_003927203.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Saimiri boliviensis boliviensis]
Length = 585
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 187/412 (45%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 179 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 238
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + E++ ++ K+L + +G +IGK G
Sbjct: 239 -------------EAC-----RMILEIMQKEAEETKLAEEIPLKILAHNGLVGRLIGKEG 280
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 281 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACACAEIEIMKKLREAFEND 338
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 339 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPH 398
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 399 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 456
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 457 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 509
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 510 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 557
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 411 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 469
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 470 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 514
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 515 GKTVNELQNLTSAEVIVPRDQ 535
>gi|242093092|ref|XP_002437036.1| hypothetical protein SORBIDRAFT_10g019330 [Sorghum bicolor]
gi|241915259|gb|EER88403.1| hypothetical protein SORBIDRAFT_10g019330 [Sorghum bicolor]
Length = 319
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 83/162 (51%), Gaps = 20/162 (12%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVV-TVYSASDETNAFE 103
+R LCP K G V ++R ++ + + + G R++ TV A E +
Sbjct: 91 FRILCPECKA---YGFPPGFVAKVRDESGAFVTVHPPFAGDYVRIIETVDGARREADG-- 145
Query: 104 DGDKFVSPAQDALFKVHDRVIAEEL-----------RGDEDSDGGHQVTAKLLVPSDQIG 152
SPAQ+AL VH R++ + RG + D G + T +L+VP +G
Sbjct: 146 -RPPMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDPRDRG-KTTTRLIVPKLHVG 203
Query: 153 CVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQ 193
C++GKGG+I++ +R ET IRIL +D+H P C S+E+VQ
Sbjct: 204 CLLGKGGKIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQ 245
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 75/162 (46%), Gaps = 29/162 (17%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI--TVSSKEFFED- 341
S R++CP G + ++R ESGA + V GD I TV D
Sbjct: 90 SFRILCPECKAYGF---PPGFVAKVRDESGAFVTVHPPFA-GDYVRIIETVDGARREADG 145
Query: 342 ---TLSATIEAVVRLQPRCSE----------------KIERDSGLISFTTRLLVPTSRIG 382
S EA++ + R E K RD G TTRL+VP +G
Sbjct: 146 RPPMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDPRDRG--KTTTRLIVPKLHVG 203
Query: 383 CLIGKGGSIITEMRRLTKANIRILPK-ENLPKIASEDDEMVQ 423
CL+GKGG II +MR TK +IRILP+ ++ P+ S +E+VQ
Sbjct: 204 CLLGKGGKIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQ 245
>gi|356576359|ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 136/282 (48%), Gaps = 30/282 (10%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSASDET 99
T R+L GS+IG+GG + + + ++I++ E PG+ +R++ V A +E
Sbjct: 36 TYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEI 95
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
Q A+ + ++++E L ++D+D + +L+VP+ G +IGKGG
Sbjct: 96 -------------QRAVELILSKLLSE-LHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGG 141
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+++ ++ A I+I ++ + ++D LV ++G +A+ I S+L ++P +
Sbjct: 142 VTIRSFIEDSQAGIKISPQDN--NYYGQNDRLVMLTGTFDEQMRAIELIVSKLAEDPHYA 199
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
Q ++++ S G P + P + P A ++ + + +
Sbjct: 200 Q-----SMNSPFSYPGVYFSGYQGVPYTYVLPSVAP----PAYNAVNYRPNGTAGGKLQN 250
Query: 280 SSKEFSLRLVCPVA--NIGGVIGKGGAIINQIRQESGAAIKV 319
S +E S L VA +IG V+G+GG I +I Q SGA IK+
Sbjct: 251 SKEERSNSLTMGVADEHIGLVVGRGGRNIMEISQVSGARIKI 292
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 28/178 (15%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
D K +R + + G VIGKGG+ I + +SGA I++ + E
Sbjct: 30 DSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRN-------------HE 76
Query: 338 FFEDT------LSATIEAVVR-----LQPRCSEKIERDSGLISFTT--RLLVPTSRIGCL 384
FF T +S I + R L SE D T RL+VP G +
Sbjct: 77 FFPGTTDRIIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGI 136
Query: 385 IGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
IGKGG I ++A I+I P++N ++D +V ++G D A+ ++++L
Sbjct: 137 IGKGGVTIRSFIEDSQAGIKISPQDN--NYYGQNDRLVMLTGTFDEQMRAIELIVSKL 192
>gi|345485197|ref|XP_003425215.1| PREDICTED: far upstream element-binding protein 1-like isoform 2
[Nasonia vitripennis]
Length = 751
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 163/380 (42%), Gaps = 57/380 (15%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED-----GDKFVSP 111
+IGRGGE + +L+ +T KI++ G ER T+ + D N ++ ++ V P
Sbjct: 92 VIGRGGEQITRLQSETGCKIQMAAESGGMPERTCTLTGSRDAVNRAKELVQSIVNQRVKP 151
Query: 112 AQDALFKVHDRVIAEELRGDEDSD----GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRS 167
+D + + GH ++++P ++G +IGKGG+ ++ ++
Sbjct: 152 GEDLIPGANPPYPGPASSASSSVTASILAGHPGFVEIMIPGPKVGLIIGKGGETIKQLQE 211
Query: 168 ETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA-------LCQIASRLHDNPSRSQ 220
++GA++ +++D ++ ++I+G+ V+ A + + +L++ +R+
Sbjct: 212 KSGAKMVVIQD----GPGQEQEKPLRITGDPQKVEHAKQLVYELIAEKEMQLYNRGTRNF 267
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS 280
S + +S SG G+ YG ++G+ + +S P
Sbjct: 268 SSNNSFSQDGNSESGEDRRGN------GVTGRPSEYGSWEGNRPAGEGKVEFSYP----- 316
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITV------ 333
P G +IGKGG I +I Q++GA ++D + D D T+
Sbjct: 317 ---------VPSNKCGIIIGKGGVTIKEINQQTGAHCELDRRNPGTDTDKFFTIRGTPEQ 367
Query: 334 --SSKEFFEDTLSATIEAVVRLQP--RCSE----KIERDSGLISFTTRLLVPTSRIGCLI 385
+K F + L + + P R +E + R + T VPT++ G +I
Sbjct: 368 VEHAKRVFAEKLGGGMGSSSNGYPTGRPNEYGGWDVNRQGNKVEVT--YPVPTNKCGIII 425
Query: 386 GKGGSIITEMRRLTKANIRI 405
GKGG I ++ + T A+ +
Sbjct: 426 GKGGETIKQINQQTGAHCEL 445
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 78/194 (40%), Gaps = 48/194 (24%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+ Y P K G IIG+GG +K++ T + + PG+ D
Sbjct: 313 FSYPVPSNKCGIIIGKGGVTIKEINQQTGAHCELDRRNPGT------------------D 354
Query: 105 GDKFV----SPAQDALFKVHDRVIAEELR-------------------GDEDSDGGHQVT 141
DKF +P Q K RV AE+L G + + G++V
Sbjct: 355 TDKFFTIRGTPEQVEHAK---RVFAEKLGGGMGSSSNGYPTGRPNEYGGWDVNRQGNKVE 411
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVV 201
VP+++ G +IGKGG+ ++ I +TGA + D P +++ I G V
Sbjct: 412 VTYPVPTNKCGIIIGKGGETIKQINQQTGAHCEL--DRRNP--GTETEKFFTIKGTPEQV 467
Query: 202 KKALCQIASRLHDN 215
+ A + +L +N
Sbjct: 468 EHAQRIFSEKLGNN 481
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 83/177 (46%), Gaps = 29/177 (16%)
Query: 297 GVIGKGGAIINQIRQESGAAIKV--DSSSTEGDDCLITVS------SKEFFEDTLSATIE 348
GVIG+GG I +++ E+G I++ +S C +T S +KE + ++ ++
Sbjct: 91 GVIGRGGEQITRLQSETGCKIQMAAESGGMPERTCTLTGSRDAVNRAKELVQSIVNQRVK 150
Query: 349 AVVRLQPRCSEKIERD-------------SGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
L P + +G F +++P ++G +IGKGG I ++
Sbjct: 151 PGEDLIPGANPPYPGPASSASSSVTASILAGHPGFV-EIMIPGPKVGLIIGKGGETIKQL 209
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGD---LDLAKDALIQVMTRLRANLFDR 449
+ + A + ++ ++ P E ++ ++I+GD ++ AK + +++ L++R
Sbjct: 210 QEKSGAKMVVI--QDGP--GQEQEKPLRITGDPQKVEHAKQLVYELIAEKEMQLYNR 262
>gi|41055221|ref|NP_957486.1| poly(rC)-binding protein 2 [Danio rerio]
gi|28279638|gb|AAH45508.1| Poly(rC) binding protein 2 [Danio rerio]
gi|37681899|gb|AAQ97827.1| poly(rC) binding protein 2 [Danio rerio]
gi|42744604|gb|AAH66603.1| Pcbp2 protein [Danio rerio]
Length = 318
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 143/310 (46%), Gaps = 56/310 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTT-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I E+L D S + VT +++VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFSMII-EKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGTPLSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIAPLMGPYG---GYKGDTA 264
S + A +++ G P T + +A P+ +G TA
Sbjct: 173 GVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPLAPSSQGFTA 232
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
G D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 233 GM-----------DASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE 281
Query: 325 EGDDCLITVS 334
D +T++
Sbjct: 282 GSSDRQVTIT 291
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S++SNS ++S V
Sbjct: 60 TLAGPTTAIFKAFSMIIEKLEED-------ISSSMSNSTATSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LR+V P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRIVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD-SGLIS---------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + EK+E D S +S T R++VP S+ G LIGKGG I
Sbjct: 62 AGPTTAIFKAFSMIIEKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|148833484|ref|NP_001092090.1| poly(rC)-binding protein 2 isoform c [Homo sapiens]
gi|157042772|ref|NP_001096636.1| poly(rC)-binding protein 2 isoform 3 [Mus musculus]
gi|73996241|ref|XP_857995.1| PREDICTED: poly(rC)-binding protein 2 isoform 20 [Canis lupus
familiaris]
gi|149714839|ref|XP_001504575.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Equus caballus]
gi|291389259|ref|XP_002711066.1| PREDICTED: poly(rC) binding protein 2-like isoform 3 [Oryctolagus
cuniculus]
gi|332206041|ref|XP_003252098.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Nomascus
leucogenys]
gi|348581075|ref|XP_003476303.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cavia porcellus]
gi|410964551|ref|XP_003988817.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Felis catus]
gi|426224372|ref|XP_004006345.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Ovis aries]
gi|426372755|ref|XP_004053283.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Gorilla gorilla
gorilla]
gi|51491472|dbj|BAD36897.1| poly(rC) binding protein 2 [Homo sapiens]
gi|119617112|gb|EAW96706.1| poly(rC) binding protein 2, isoform CRA_a [Homo sapiens]
gi|148672027|gb|EDL03974.1| poly(rC) binding protein 2, isoform CRA_a [Mus musculus]
gi|149031921|gb|EDL86833.1| rCG50739, isoform CRA_b [Rattus norvegicus]
Length = 331
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 145/313 (46%), Gaps = 49/313 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIA------PLMGPYGGYKG 261
S + A +++ G P T + +A P+ G+ G
Sbjct: 173 GVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSG 232
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+ Y A D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 233 IESSSPEVKGYWAGLDA-SAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN 291
Query: 322 SSTEGDDCLITVS 334
D +T++
Sbjct: 292 PVEGSTDRQVTIT 304
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 89/226 (39%), Gaps = 64/226 (28%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY----------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 101 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVK 160
Query: 94 --------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRVIAEE- 127
S F G + Q A L K+H + +
Sbjct: 161 QICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSH 220
Query: 128 ---------LRGDEDS-----------DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIR 166
G E S D Q T+ +L +P+D IGC+IG+ G + IR
Sbjct: 221 FPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIR 280
Query: 167 SETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+GAQI+I +D V I+G A+ + A I RL
Sbjct: 281 QMSGAQIKIANP-----VEGSTDRQVTITGSAASISLAQYLINVRL 321
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|296213265|ref|XP_002753197.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Callithrix
jacchus]
Length = 342
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 142/306 (46%), Gaps = 48/306 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVI---AEELRGDEDSDGGHQ---VTAKLLVPSDQIGCVIGKGG 159
A+FK +I E++R + VT L+VP+ Q G +IGKGG
Sbjct: 67 ---------AIFKAFAMIIDKLEEDIRSSMTNSTAASRPPVTLSLVVPASQCGSLIGKGG 117
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR- 218
++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 118 CKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQIFVVMLESPPKG 173
Query: 219 ---------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIAPLMGPYGGYKGDTAGDWS 268
S + A +++ G P T + +A + G+T +S
Sbjct: 174 VTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAIQQSHFPMTHGNTG--FS 231
Query: 269 RSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
L D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ + D
Sbjct: 232 AGL------DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTD 285
Query: 329 CLITVS 334
+T++
Sbjct: 286 RQVTIT 291
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 100/244 (40%), Gaps = 59/244 (24%)
Query: 48 LCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY------------- 93
+ P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQI 162
Query: 94 ------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRVIAEE--- 127
S F G + Q A L K+H I +
Sbjct: 163 FVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAIQQSHFP 222
Query: 128 -LRGDEDSDGGHQVTAK-----LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL 181
G+ G +A+ L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 223 MTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP--- 279
Query: 182 PSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPT 241
+D V I+G A+ + A I RL L+ + +S++++ S + P
Sbjct: 280 --VEGSTDRQVTITGSAASISLAQYLINVRL--------SLVTGGMGSSYNNADSSIIPF 329
Query: 242 AATP 245
+P
Sbjct: 330 CCSP 333
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 82/187 (43%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ + S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------IRSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +L LV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLSLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T L+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDIRSSMTNSTAASRPPVTLSLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|118792630|ref|XP_320427.3| AGAP012103-PA [Anopheles gambiae str. PEST]
gi|116116989|gb|EAA00333.3| AGAP012103-PA [Anopheles gambiae str. PEST]
Length = 494
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 180/413 (43%), Gaps = 46/413 (11%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L +G+IIGR G ++ + +++++ + + GS E+ +T+Y +
Sbjct: 64 DFPLRVLVQSEMVGAIIGRQGSTIRHITQQSRARVDVHRKDNVGSVEKAITIYGNPENCT 123
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
+ + I E ++ + +S ++ K+L ++ IG +IGK G
Sbjct: 124 ------------------MACKKILEVMQQEANSTNKGEICLKILAHNNLIGRIIGKSGN 165
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
++ I +T +I + + S L + ++ + G + K QI+++L +
Sbjct: 166 TIKRIMQDTDTKITVSSINDISSFNL--ERIITVKGSIENMSKGESQISAKLRQSYENDL 223
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTA---GDWSRSLYSAPRD 277
LA + + P A G MG G G TA G + +Y
Sbjct: 224 QALAP-----QTIMFPGLHPMAMMSTAGNG--MGFTGRTAGATASASGSGATGMYPGSNF 276
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
+ +E + L P +G +IG G I I + SGA++K+ + E D + ++
Sbjct: 277 PIEVQETTY-LYIPNNAVGAIIGTKGLHIRNIIRFSGASVKI--APLEADKPQEQQTERK 333
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCLIGKGGSI 391
T+ T EA + Q EK+ R+ G +S T + VP++++G +IGKGG
Sbjct: 334 V---TIIGTPEAQWKAQYLIFEKM-REEGFVSGTDDVRLTVEIFVPSAQVGRIIGKGGQN 389
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRA 444
+ E++R+T + I+ LP E+ +++ V I G + A ++ T + A
Sbjct: 390 VRELQRVTGSIIK-LP-EHTASAPVDEETTVHIIGPFFSVQSAQRRIRTMMLA 440
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 32/197 (16%)
Query: 28 YTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETV 82
Y G + F I ++T Y Y+ P +G+IIG G ++ + + + ++I +
Sbjct: 271 YPGSN---FPIEVQETTYLYI-PNNAVGAIIGTKGLHIRNIIRFSGASVKIAPLEADKPQ 326
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV-- 140
ER VT+ + A +K +I E++R + G V
Sbjct: 327 EQQTERKVTIIGTPE-----------------AQWKAQ-YLIFEKMREEGFVSGTDDVRL 368
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T ++ VPS Q+G +IGKGGQ V+ ++ TG+ I++ EH S + + V I G
Sbjct: 369 TVEIFVPSAQVGRIIGKGGQNVRELQRVTGSIIKL--PEHTASAPVDEETTVHIIGPFFS 426
Query: 201 VKKALCQIAS-RLHDNP 216
V+ A +I + L NP
Sbjct: 427 VQSAQRRIRTMMLATNP 443
>gi|363747265|ref|XP_003643961.1| PREDICTED: poly(rC)-binding protein 2-like isoform 3 [Gallus
gallus]
Length = 320
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 145/313 (46%), Gaps = 49/313 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIA------PLMGPYGGYKG 261
S + A +++ G P T + +A P+ G+ G
Sbjct: 173 GVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSG 232
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+ Y A D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 233 IESSSPEVKGYWAGLDA-SAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN 291
Query: 322 SSTEGDDCLITVS 334
D +T++
Sbjct: 292 PVEGSTDRQVTIT 304
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 86/218 (39%), Gaps = 64/218 (29%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY----------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 101 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVK 160
Query: 94 --------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRVIAEE- 127
S F G + Q A L K+H + +
Sbjct: 161 QICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSH 220
Query: 128 ---------LRGDEDS-----------DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIR 166
G E S D Q T+ +L +P+D IGC+IG+ G + IR
Sbjct: 221 FPMSHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIR 280
Query: 167 SETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
+GAQI+I +D V I+G A+ + A
Sbjct: 281 QMSGAQIKIANP-----VEGSTDRQVTITGSAASISLA 313
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|344282127|ref|XP_003412826.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Loxodonta africana]
Length = 599
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 187/417 (44%), Gaps = 62/417 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACATAEIEIMKKLREAFEND 352
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A AP P+ + G +
Sbjct: 353 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSG-----YFS 407
Query: 270 SLYSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
SLY P ++ + L P +G +IGK GA I Q+ + +GA+IK+ +
Sbjct: 408 SLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--AP 465
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPT 378
EG D VS + ++ EA + Q R K++ ++ + + VP+
Sbjct: 466 AEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPS 518
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
S G +IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 519 STAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 571
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 425 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 483
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 484 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 528
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 529 GKTVNELQNLTSAEVIVPRDQ 549
>gi|348503027|ref|XP_003439068.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 446
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 144/325 (44%), Gaps = 63/325 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R ++ +++ I E GS ER++T+ ++D + F
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKRIREESSARVNISE---GSCPERIITITGSTD--SVFRA 73
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
+K+ + + A G S VT +L++P+ Q G +IGKGG ++
Sbjct: 74 FTMIT-------YKLEEDLTALVANGTISSK--PPVTLRLVIPASQCGSLIGKGGAKIKE 124
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------ 218
IR TGAQI++ D LP+ R V ISG V + + I + + ++P +
Sbjct: 125 IRESTGAQIQVAGD-LLPNSTERG---VTISGNQDSVIQCVKLICTVILESPPKGATIPY 180
Query: 219 --SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
S A I+ + S P P+ +A GG A ++ Y P
Sbjct: 181 RPSPSPAALLIAGNQVFEASEFAP---HPLYSVA-----QGGLDLQQAYTL-QNQYGIPH 231
Query: 277 DDL---------------------------SSKEFSLRLVCPVANIGGVIGKGGAIINQI 309
+L S+ + S L+ P IG +IG+ G IN+I
Sbjct: 232 SELAKLHQLSVQQGLSPIAQPASAVIPGMDSNSQTSQELLIPNDLIGSIIGRQGTKINEI 291
Query: 310 RQESGAAIKVDSSSTEGDDCLITVS 334
RQ SGA IK+ S D +T++
Sbjct: 292 RQVSGAQIKIGSQLDGTSDRHVTIT 316
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 30/166 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
+LRL+ +G +IGK G + +IR+ES A + + S + +IT++
Sbjct: 16 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEGSC--PERIITIT--------- 64
Query: 344 SATIEAVVRLQPRCSEKIERD------SGLIS----FTTRLLVPTSRIGCLIGKGGSIIT 393
+ ++V R + K+E D +G IS T RL++P S+ G LIGKGG+ I
Sbjct: 65 -GSTDSVFRAFTMITYKLEEDLTALVANGTISSKPPVTLRLVIPASQCGSLIGKGGAKIK 123
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVM 439
E+R T A I++ + LP + + V ISG+ +D++IQ +
Sbjct: 124 EIRESTGAQIQVA-GDLLP---NSTERGVTISGN----QDSVIQCV 161
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
DGG VT +LL+ ++G +IGK G+ V+ IR E+ A++ I + SC R ++
Sbjct: 9 DGGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEG----SCPER---II 61
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
I+G V +A I +L ++ L + ++N G ++ P V
Sbjct: 62 TITGSTDSVFRAFTMITYKLEED-------LTALVAN---------GTISSKPPV----- 100
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LRLV P + G +IGKGGA I +IR+
Sbjct: 101 --------------------------------TLRLVIPASQCGSLIGKGGAKIKEIRES 128
Query: 313 SGAAIKV 319
+GA I+V
Sbjct: 129 TGAQIQV 135
>gi|313245372|emb|CBY40123.1| unnamed protein product [Oikopleura dioica]
Length = 412
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 182/402 (45%), Gaps = 57/402 (14%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSA 95
G DT + L P +G+IIG+GG V+Q+ S+ R+ PGS+ +V T+Y A
Sbjct: 34 GSPDTPLKMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRREGPGSD-KVATIYGA 92
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVI 155
+ A A + I E +R +E + ++ K+L + IG +I
Sbjct: 93 PEACGA-------------AAIR-----ILEIVRKEEKDN---ELPLKVLAHNALIGRLI 131
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH-- 213
G+ G+ +++++ +TG +I I L + D + I GE + +A QI +L
Sbjct: 132 GRDGRNLKHVQDKTGTRIAISSMHELSPYNM--DRTISIHGEVKGISEAEQQITEKLRQF 189
Query: 214 --DNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTA-GDWSRS 270
D + SQ L +++ + A P ++ Y+G + S+S
Sbjct: 190 ETDMAAMSQQSLYPGLNSQQMQMFPGLQSPTAPPAYNVS--------YQGSYFFKNVSQS 241
Query: 271 LYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCL 330
++ + ++ + ++ L+ P +G +IG G I I + +GA+I++ ++
Sbjct: 242 VFFSGNSSSNNTQETVTLLIPSGAVGAIIGSRGTHIRNISRIAGASIRIHVNADRDAKAR 301
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS----FTTRLLVPTSRIGCLIG 386
+T+ E+ + Q +K++++ + TT++ +P +G +IG
Sbjct: 302 VTIV----------GVPESQWKAQFCIFDKLKQEGWFGNEEGRLTTQITIPGKLVGRIIG 351
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL 428
KGG + E++R+T + + I P++ ++ + ++ V I+G
Sbjct: 352 KGGVNVRELQRITSSEVTI-PRQG--ELNTSEEIPVSITGTF 390
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 14/165 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE--GDDCLITVSSKEF 338
S + L+++ P + +G +IGKGG+ + QI Q + +VD E G D + T+
Sbjct: 35 SPDTPLKMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRREGPGSDKVATIYGAPE 94
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
+ I +VR K E+D+ L ++L + IG LIG+ G + ++
Sbjct: 95 ACGAAAIRILEIVR-------KEEKDNEL---PLKVLAHNALIGRLIGRDGRNLKHVQDK 144
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
T I I L D + I G++ +A Q+ +LR
Sbjct: 145 TGTRIAISSMHELSPY--NMDRTISIHGEVKGISEAEQQITEKLR 187
>gi|146422870|ref|XP_001487369.1| hypothetical protein PGUG_00746 [Meyerozyma guilliermondii ATCC
6260]
Length = 545
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 144/351 (41%), Gaps = 57/351 (16%)
Query: 3 GQRNSYG-KRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRG 61
G SYG +++ +A+H R + + + + P +R CP+++ +IG+
Sbjct: 161 GTTTSYGTSQAYDPVPFANHLDYTSRPMANHQAERELDPTYVSFRMYCPVKEASFVIGKR 220
Query: 62 GEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDA--LFKV 119
G+++ LR ++I++ E + +ER++ V PA++ F +
Sbjct: 221 GDMINHLREKANARIQVSENIKDVQERIILVK----------------GPAENVAKAFGL 264
Query: 120 HDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
R I EE + S Q K+L+P +G +IGKGG + I + A+++ ++
Sbjct: 265 ITRAILEEPEDEPASIMSRQYNLKVLIPHPMVGYIIGKGGSKFREIEENSAAKLK-AAEQ 323
Query: 180 HLPSCALRSDELVQISGEASVVKKALCQIASRL--HDNPSRSQHLLASAISNSHSSSGSL 237
LP+ +D ++ + G + A+ I+ + H + + ++ N+ + ++
Sbjct: 324 PLPNS---TDRVLSVLGVGDAIHIAIYYISQVIIEHKDILKKHKIVYYTPGNNQLMNNTM 380
Query: 238 ----------VGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR----------- 276
G PI G AP Y +A ++ P
Sbjct: 381 GLIPNNTYGNTGIIGNDPIQGGAPFQHNYQRQFQPSAPSHNQITTPVPTQLYTDEHGNTM 440
Query: 277 --DDLSS---------KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA 316
D ++S +FS + NIG VIGKGG I QIR+ SG +
Sbjct: 441 IGDVITSVPVPAGTGTDKFSEDVFVANTNIGSVIGKGGNNIKQIRESSGCS 491
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS-SK 336
+L S R+ CPV VIGK G +IN +R+++ A I+V + + + +I V
Sbjct: 196 ELDPTYVSFRMYCPVKEASFVIGKRGDMINHLREKANARIQVSENIKDVQERIILVKGPA 255
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS--FTTRLLVPTSRIGCLIGKGGSIITE 394
E A++ E + + ++S + ++L+P +G +IGKGGS E
Sbjct: 256 ENVAKAFGLITRAILE------EPEDEPASIMSRQYNLKVLIPHPMVGYIIGKGGSKFRE 309
Query: 395 MRRLTKANIR 404
+ + A ++
Sbjct: 310 IEENSAAKLK 319
>gi|313240346|emb|CBY32688.1| unnamed protein product [Oikopleura dioica]
Length = 568
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 169/378 (44%), Gaps = 52/378 (13%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSA 95
G DT + L P +G+IIG+GG V+Q+ S+ R+ PGS+ +V T+Y A
Sbjct: 190 GSPDTPLKMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRREGPGSD-KVATIYGA 248
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVI 155
+ A A ++ + V EE +++ K+L + IG +I
Sbjct: 249 PEACGA-------------AAIRILEIVRKEE--------KDNELPLKVLAHNALIGRLI 287
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH-- 213
G+ G+ +++++ +TG +I I L + D + I GE + +A QI +L
Sbjct: 288 GRDGRNLKHVQDKTGTRIAISSMHELSPYNM--DRTISIHGEVKGISEAEQQITEKLRQF 345
Query: 214 --DNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
D + SQ L +++ + P +P A + G Y + S+S+
Sbjct: 346 ETDMAAMSQQSLYPGLNSQQMQ----MFPGLQSPTAPPAYNVSYQGSY---FFKNVSQSV 398
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
+ + ++ + ++ L+ P +G +IG G I I + +GA+I++ ++ +
Sbjct: 399 FFSGNSSSNNTQETVTLLIPSGAVGAIIGSRGTHIRNISRIAGASIRIHVNADRDAKARV 458
Query: 332 TVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS----FTTRLLVPTSRIGCLIGK 387
T+ E+ + Q +K++++ + TT++ +P +G +IGK
Sbjct: 459 TIV----------GVPESQWKAQFCIFDKLKQEGWFGNEEGRLTTQITIPGKLVGRIIGK 508
Query: 388 GGSIITEMRRLTKANIRI 405
GG + E++R+T + + I
Sbjct: 509 GGVNVRELQRITSSEVTI 526
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 14/165 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE--GDDCLITVSSKEF 338
S + L+++ P + +G +IGKGG+ + QI Q + +VD E G D + T+
Sbjct: 191 SPDTPLKMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRREGPGSDKVATIYGAPE 250
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
+ I +VR K E+D+ L ++L + IG LIG+ G + ++
Sbjct: 251 ACGAAAIRILEIVR-------KEEKDNEL---PLKVLAHNALIGRLIGRDGRNLKHVQDK 300
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
T I I L D + I G++ +A Q+ +LR
Sbjct: 301 TGTRIAISSMHELSPYNM--DRTISIHGEVKGISEAEQQITEKLR 343
>gi|28317389|tpe|CAD29864.1| TPA: hnRNP-E2 b [Xenopus laevis]
Length = 319
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 140/303 (46%), Gaps = 41/303 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFSMII-DKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD- 277
+ SSS + A I G + P A S S +
Sbjct: 173 G---VTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGNT 229
Query: 278 ------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ + +D +
Sbjct: 230 GFSGGIDASAQATSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQV 289
Query: 332 TVS 334
T++
Sbjct: 290 TIT 292
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS +SS V
Sbjct: 60 TLAGPTNAIFKAFSMIIDKLEED-------ISSSMTNSTASSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LRLV P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|291240053|ref|XP_002739934.1| PREDICTED: far upstream element-binding protein-like [Saccoglossus
kowalevskii]
Length = 767
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/415 (20%), Positives = 164/415 (39%), Gaps = 77/415 (18%)
Query: 26 RRYTGD-DRDQFI-IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVP 83
RR+ G+ ++D+F G Y P + +G +IGRGGE + +L+ ++ KI+I +
Sbjct: 106 RRHLGNGNQDEFERPGQSSLSEEYAVPDKLVGLVIGRGGEQITRLQAESGCKIQIAQDSG 165
Query: 84 GSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGG---HQV 140
G +R+ T+ + A E + DR+I SDGG
Sbjct: 166 GLPDRMCTL---TGNPQAIERAKALI-----------DRIIERGQGPAVGSDGGLGDGNT 211
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T +L++PS+++G VIGKGG++++ ++ G ++ +++D + + SD+ +++SG+
Sbjct: 212 TIELMIPSNKVGLVIGKGGEMIKKLQERAGVKMVMIQDA---TTSGTSDKPLRVSGDPQK 268
Query: 201 VKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYK 260
K A + + D + + + + G +
Sbjct: 269 CKHARELVNELIGDKDNPGMEMFGERMDGGYDRERDDDRDFERR-------------GGR 315
Query: 261 GDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
GD Y ++ P +G VIG+GG +I +I+ E+GA I+
Sbjct: 316 GD---------YGPRMGGPPGGGGGFEMLVPRFAVGIVIGRGGDMIKKIQNETGARIQFR 366
Query: 321 SSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISF---------- 370
+ L +S +D + E + L +K E+
Sbjct: 367 PDDGHSPERLAVISGS---DDKIDHAREKIDELIDSARQKDEQRRQGGGRDRGFGPPPHR 423
Query: 371 --------------------TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+T VP+S+ G +IGKGG I + + A++ +
Sbjct: 424 EGGRGGGGGGFRGGPPDRMDSTTFTVPSSKCGLVIGKGGETIRNINMQSGAHVEL 478
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 90/173 (52%), Gaps = 13/173 (7%)
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
G+ ++ + P S+E+++ P +G VIG+GG I +++ ESG I++ S
Sbjct: 110 GNGNQDEFERPGQSSLSEEYAV----PDKLVGLVIGRGGEQITRLQAESGCKIQIAQDSG 165
Query: 325 EGDDCLITVSSKEFFEDTLSATIEAVV-RLQPRCSEKIERDSGLI--SFTTRLLVPTSRI 381
D + T++ + A I+ ++ R Q + D GL + T L++P++++
Sbjct: 166 GLPDRMCTLTGNPQAIERAKALIDRIIERGQ---GPAVGSDGGLGDGNTTIELMIPSNKV 222
Query: 382 GCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
G +IGKGG +I +++ +A ++++ ++ + D+ +++SGD K A
Sbjct: 223 GLVIGKGGEMIKKLQE--RAGVKMVMIQDA-TTSGTSDKPLRVSGDPQKCKHA 272
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 70/150 (46%), Gaps = 16/150 (10%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN-AFE 103
+ L P +G +IGRGG+++K+++ +T ++I+ S ER+ + + D+ + A E
Sbjct: 332 FEMLVPRFAVGIVIGRGGDMIKKIQNETGARIQFRPDDGHSPERLAVISGSDDKIDHARE 391
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV---------------TAKLLVPS 148
D+ + A+ + + G G + + VPS
Sbjct: 392 KIDELIDSARQKDEQRRQGGGRDRGFGPPPHREGGRGGGGGGFRGGPPDRMDSTTFTVPS 451
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKD 178
+ G VIGKGG+ ++NI ++GA + + ++
Sbjct: 452 SKCGLVIGKGGETIRNINMQSGAHVELSRN 481
>gi|395540426|ref|XP_003772156.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-B-like [Sarcophilus harrisii]
Length = 587
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 95/449 (21%), Positives = 191/449 (42%), Gaps = 79/449 (17%)
Query: 18 YADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIR 77
Y GP ++ G Q D R L P + +G+IIG+ G ++ + T+SKI
Sbjct: 175 YGHRGPQRQGSPGGAAGQN--HQNDIPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKID 232
Query: 78 IG-ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSD 135
I + G+ E+ +T++++ + + ++I E ++ + +D+
Sbjct: 233 IHRKENAGASEKPITIHASPEGCS------------------TACKIIMEIMQKEAQDTK 274
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ +G +IGK G+ ++ I +T +I I + L + + +
Sbjct: 275 FTDEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVK 332
Query: 196 GEASVVKKALCQIASRLHDN-------PSRSQHLLASAISNS-----HSSSGSLVGPTAA 243
G KA +I ++ ++ + HLL N+ S+SG T
Sbjct: 333 GSIETCGKAEEEIMKKIRESYESDLSAMNLQAHLLPGLNLNALGLFPASTSGIPSPSTLG 392
Query: 244 TPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGG 303
P A PYG ++ ++ L P +G +IGK G
Sbjct: 393 VPSAAAATNYLPYGQ---------------------QAETETVHLFIPAMAVGAIIGKMG 431
Query: 304 AIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIER 363
I Q+ + +GA+IK+ T + + ++ EA + Q R K++
Sbjct: 432 QHIKQLSRFAGASIKIAPPETPDAKERMVI---------ITGPPEAQFKAQGRIYGKLKE 482
Query: 364 DSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASED 418
++ + + VP+ G +IGKGG + E++ LT A + ++P++ +P E+
Sbjct: 483 ENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQIP---DEN 538
Query: 419 DE-MVQISGDL---DLAKDALIQVMTRLR 443
DE +V+I+G LA+ + +++ +++
Sbjct: 539 DEVIVKITGHFYACQLAQRKIQEILAQVK 567
>gi|126345445|ref|XP_001362564.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Monodelphis
domestica]
Length = 338
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 140/327 (42%), Gaps = 59/327 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVT 175
Query: 212 --LHDNPSRSQHLLAS----------AISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
PS S + A + S H++ + P P + + G Y
Sbjct: 176 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP 235
Query: 260 KGDTAGDWSRSLYSA--PRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
+ D ++ + P D S++ S L P IG +IG+ GA IN
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKIN 295
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITVS 334
+IRQ SGA IK+ + D +T++
Sbjct: 296 EIRQMSGAQIKIANPVEGSTDRQVTIT 322
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I +D V
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVT 320
Query: 194 ISGEASVVKKA 204
I+G A+ + A
Sbjct: 321 ITGSAASISLA 331
>gi|196016215|ref|XP_002117961.1| hypothetical protein TRIADDRAFT_61998 [Trichoplax adhaerens]
gi|190579434|gb|EDV19529.1| hypothetical protein TRIADDRAFT_61998 [Trichoplax adhaerens]
Length = 364
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 138/300 (46%), Gaps = 39/300 (13%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
++ G IIG+GG +K R + ++I I + GS ER+VTV D
Sbjct: 55 KEAGRIIGKGGAKIKSFREQSTARINISD---GSLPERIVTVNGPID------------- 98
Query: 111 PAQDALFKVHDRVIAEELRG-DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSET 169
A FK+ + + E+ R + S + LL+P +IGKGG V+ IR T
Sbjct: 99 -AVCKAFKLICQKLDEDFRIINNSSKSEPTIKFDLLIPVPHCRSIIGKGGGTVKEIREST 157
Query: 170 GAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP--------SRSQH 221
GAQ+ I + LP+ SD ++ I+G +S + K + +++ L + P + +
Sbjct: 158 GAQVSIASNV-LPN---SSDRVMTITGSSSAISKCIQRLSQLLSELPLGQHVPYQPKPPN 213
Query: 222 LLASAISNS--HSSSGSLVGPTAATPIVGI-----APLMGPYGGYKGDTAGDWSRSLYSA 274
+ +A N H + ++ GP P + P++ Y D +++ +SA
Sbjct: 214 VPPTAFQNGQVHELTFAVPGPFPIPPHAQLPYGPPVPVITQIAPYSVDIPSIVTQN-FSA 272
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
+ + + L P IG +IG+GG IN+IRQ SGA IK+ S + + +T+S
Sbjct: 273 MSNGGTFARSTQLLKIPHDLIGCIIGRGGVKINEIRQISGANIKIASPNGDTTGRQVTIS 332
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 58/193 (30%)
Query: 41 EDTV-YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
E T+ + L P+ SIIG+GG VK++R T +++ I V P S +RV+T+ +S
Sbjct: 125 EPTIKFDLLIPVPHCRSIIGKGGGTVKEIRESTGAQVSIASNVLPNSSDRVMTITGSSSA 184
Query: 99 TN-------------------------------AFEDGD----KFVSP------------ 111
+ AF++G F P
Sbjct: 185 ISKCIQRLSQLLSELPLGQHVPYQPKPPNVPPTAFQNGQVHELTFAVPGPFPIPPHAQLP 244
Query: 112 --------AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLL-VPSDQIGCVIGKGGQIV 162
Q A + V I + + G + +LL +P D IGC+IG+GG +
Sbjct: 245 YGPPVPVITQIAPYSVDIPSIVTQNFSAMSNGGTFARSTQLLKIPHDLIGCIIGRGGVKI 304
Query: 163 QNIRSETGAQIRI 175
IR +GA I+I
Sbjct: 305 NEIRQISGANIKI 317
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 25/159 (15%)
Query: 296 GGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQP 355
G +IGKGGA I R++S A I + S + ++TV+ I+AV +
Sbjct: 58 GRIIGKGGAKIKSFREQSTARINISDGSLP--ERIVTVN----------GPIDAVCKAFK 105
Query: 356 RCSEKIERDSGLISFTTR--------LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILP 407
+K++ D +I+ +++ LL+P +IGKGG + E+R T A + I
Sbjct: 106 LICQKLDEDFRIINNSSKSEPTIKFDLLIPVPHCRSIIGKGGGTVKEIRESTGAQVSI-- 163
Query: 408 KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
N+ + + D ++ I+G A IQ +++L + L
Sbjct: 164 ASNV--LPNSSDRVMTITGS-SSAISKCIQRLSQLLSEL 199
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 364 DSGLISFTTRLL-VPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+ G + +T+LL +P IGC+IG+GG I E+R+++ ANI+I
Sbjct: 275 NGGTFARSTQLLKIPHDLIGCIIGRGGVKINEIRQISGANIKI 317
>gi|387017714|gb|AFJ50975.1| Poly(rC)-binding protein 2-like [Crotalus adamanteus]
Length = 347
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 145/334 (43%), Gaps = 75/334 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWS 268
S + A SSGS P A + + L GP
Sbjct: 173 GVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGP------PQEAYTI 226
Query: 269 RSLYSAPRDDL----------------------------SSKEFSLRLVCPVANIGGVIG 300
+ Y+ P+ DL S++ S L P IG +IG
Sbjct: 227 QGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIG 286
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 287 RQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 320
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS +SS V
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNSTASSRPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LRLV P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I +D V
Sbjct: 264 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVT 318
Query: 194 ISGEASVVKKALCQIASRL 212
I+G A+ + A I RL
Sbjct: 319 ITGSAASISLAQYLINVRL 337
>gi|255559157|ref|XP_002520600.1| conserved hypothetical protein [Ricinus communis]
gi|223540199|gb|EEF41773.1| conserved hypothetical protein [Ricinus communis]
Length = 161
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 75/131 (57%), Gaps = 13/131 (9%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D VYR + P+ K+GSIIGR GE++KQ+ I+T+++IRI + P +R+V +
Sbjct: 24 PGDNVYRLIVPVAKVGSIIGRKGELIKQMCIETRARIRILDGPPSISDRIVLI------- 76
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA-----KLLVPSDQIGCV 154
+ E+ + +SPA DA+ +V RV G+ D+ G A +LLV S Q +
Sbjct: 77 SGKEEPEAALSPAIDAVLRVFKRVSGPSA-GEGDATGSAVAGAAFSSVRLLVASSQAINL 135
Query: 155 IGKGGQIVQNI 165
IGK G +++I
Sbjct: 136 IGKQGSTIKSI 146
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 67/131 (51%), Gaps = 11/131 (8%)
Query: 287 RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSAT 346
RL+ PVA +G +IG+ G +I Q+ E+ A I++ D ++ +S KE E LS
Sbjct: 30 RLIVPVAKVGSIIGRKGELIKQMCIETRARIRILDGPPSISDRIVLISGKEEPEAALSPA 89
Query: 347 IEAVVRLQPRCS--EKIERD------SGLISFTTRLLVPTSRIGCLIGKGGSIIT---EM 395
I+AV+R+ R S E D +G + RLLV +S+ LIGK GS I E
Sbjct: 90 IDAVLRVFKRVSGPSAGEGDATGSAVAGAAFSSVRLLVASSQAINLIGKQGSTIKSILES 149
Query: 396 RRLTKANIRIL 406
RR ++ I
Sbjct: 150 RRCASSSCYIF 160
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 11/76 (14%)
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD----- 427
RL+VP +++G +IG+ G +I +M T+A IRIL + P I+ D +V ISG
Sbjct: 30 RLIVPVAKVGSIIGRKGELIKQMCIETRARIRIL--DGPPSIS---DRIVLISGKEEPEA 84
Query: 428 -LDLAKDALIQVMTRL 442
L A DA+++V R+
Sbjct: 85 ALSPAIDAVLRVFKRV 100
>gi|308321889|gb|ADO28082.1| poly(rc)-binding protein 2 [Ictalurus furcatus]
Length = 318
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 144/310 (46%), Gaps = 56/310 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTT-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +++VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFSMII-DKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGTPLSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIAPLMGPY---GGYKGDTA 264
S + A +++ G P T + +A P+ +G TA
Sbjct: 173 GVTIPYRPKPSGSPVTFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPLAPSSQGFTA 232
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
G D +++ S L P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 233 G-----------MDATTQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE 281
Query: 325 EGDDCLITVS 334
+D +T++
Sbjct: 282 GSNDRQVTIT 291
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 85/214 (39%), Gaps = 51/214 (23%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSA-------- 95
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 100 LRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPLSIIECV 159
Query: 96 -----------------------SDETNAFEDGDKFVSPAQDA-----LFKVHDRVIAEE 127
S F G + Q A L K+H + +
Sbjct: 160 KQICVVMLESPPKGVTIPYRPKPSGSPVTFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQS 219
Query: 128 LRGDEDSDGGHQV---------TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD 178
S G + +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 220 PFPLAPSSQGFTAGMDATTQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP 279
Query: 179 EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+D V I+G + + A I +RL
Sbjct: 280 -----VEGSNDRQVTITGSPASISLAEYLINARL 308
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S++SNS ++S V
Sbjct: 60 TLAGPTTAIFKAFSMIIDKLEED-------ISSSMSNSTATSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LR+V P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRIVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD-SGLIS---------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S +S T R++VP S+ G LIGKGG I
Sbjct: 62 AGPTTAIFKAFSMIIDKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|387915508|gb|AFK11363.1| alphaCP-3 [Callorhinchus milii]
Length = 349
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 139/326 (42%), Gaps = 74/326 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTD-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---------VTAKLLVPSDQIGCVIG 156
A+FK + + +ED + VT +L+VP+ Q G +IG
Sbjct: 67 ---------AIFKAFAMI---AFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIG 114
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KGG ++ IR TGAQ+++ D LP+ R+ V ISG + + + QI + ++P
Sbjct: 115 KGGSKIKEIRESTGAQVQVAGD-MLPNSTERA---VTISGMPDAIIQCVKQICVVMLESP 170
Query: 217 SRSQHL-----LASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYK-GDTAGDWSRS 270
+ + ASA + A P A L+ YK T+ W
Sbjct: 171 PKGATIPYRPKPASAPVIFAGGQAYTIQGQCAIPHPDDACLLS--AEYKTALTSTLWRSP 228
Query: 271 LYSAPRDDLSSKEF---SLR---------------------------LVCPVANIGGVIG 300
+ P L + SLR L P IG +IG
Sbjct: 229 QLAHPSSQLKEAAWRPESLRGKMELKNCNEESENWGMDANPQASTHELTIPNDLIGCIIG 288
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEG 326
+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 289 RQGTKINEIRQMSGAQIKI-ANATEG 313
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
++GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 TEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I+NS ++S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAFKFEED-----------INNSMTNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 24/183 (13%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + + IT + F+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFK--- 70
Query: 344 SATIEAVVRLQPRCSEKIERD------SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
A + + E I + T RL+VP S+ G LIGKGGS I E+R
Sbjct: 71 -----AFAMIAFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVST 455
T A +++ + LP + + V ISG DA+IQ + ++ + + +GA
Sbjct: 126 STGAQVQVA-GDMLP---NSTERAVTISG----MPDAIIQCVKQICVVMLESPPKGATIP 177
Query: 456 FVP 458
+ P
Sbjct: 178 YRP 180
>gi|351698877|gb|EHB01796.1| Poly(rC)-binding protein 4 [Heterocephalus glaber]
Length = 443
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 154/339 (45%), Gaps = 49/339 (14%)
Query: 12 SHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTV---YRYLCPIRKIGSIIGRGGEIVKQL 68
+HSQ A P++ + ++ PE ++ R L +++GSIIG+ GE VK++
Sbjct: 27 THSQATVAPAPPDRMSSSDAGLEE---EPELSITLTLRMLMHGKEVGSIIGKKGETVKRI 83
Query: 69 RIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEE 127
R + ++I I E GS ER+ T+ + T A ++ FK+ + + A
Sbjct: 84 REQSSARITISE---GSCPERITTI---TGSTAAVFHAVSMIA------FKLDEDLCAAP 131
Query: 128 LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR 187
G S VT +L++P+ Q G +IGK G ++ IR TGAQ+++ D LP+ R
Sbjct: 132 ANGGSVSR--PPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGD-LLPNSTER 188
Query: 188 SDELVQISGEASVVKKALCQIASRLHDNPSRSQH------------LLASAISNSHSSSG 235
+ V +SG + + QI + + ++P + LL++ S
Sbjct: 189 A---VTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQY 245
Query: 236 SLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANI 295
V P T + ++ P+ S P D S++ S + P I
Sbjct: 246 GAVTPAEVTKLQQLSGHAVPFA------------SPSVVPGLDPSAQTSSQEFLVPNDLI 293
Query: 296 GGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
G VIG+ G+ I++IRQ SGA IK+ + + + +T++
Sbjct: 294 GCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 332
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 21/163 (12%)
Query: 260 KGDTAGDWSRS---LYSAPRDDLSSKE------------FSLRLVCPVANIGGVIGKGGA 304
+ A W+ S + AP D +SS + +LR++ +G +IGK G
Sbjct: 19 RASQATAWTHSQATVAPAPPDRMSSSDAGLEEEPELSITLTLRMLMHGKEVGSIIGKKGE 78
Query: 305 IINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE--DTLSATIEAVVRLQPRCSEKIE 362
+ +IR++S A I + S IT S+ F ++ ++ + P +
Sbjct: 79 TVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGSVS 138
Query: 363 RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
R T RL++P S+ G LIGK G+ I E+R T A +++
Sbjct: 139 RPP----VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 177
>gi|328702409|ref|XP_001943097.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Acyrthosiphon pisum]
gi|328702413|ref|XP_003241893.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 3
[Acyrthosiphon pisum]
Length = 426
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 95/181 (52%), Gaps = 8/181 (4%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+GP+D R L P + GSIIG+GG + +LR D + + + + PG E R++T+ S++D
Sbjct: 18 MGPDDIELRVLIPSKVAGSIIGKGGFNISRLRTDYNATVTVPD-CPGPE-RILTIISSND 75
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
NA + + + +D + +++ G V ++LV Q GC+IGK
Sbjct: 76 --NALKVLGEVMGNLEDGGSRFKRGGAGGGQGNNDNQGGETDVDVRMLVHQSQAGCIIGK 133
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GG V+ +R +TG++I+I + C + +D +VQI+G+ + + ++ L P
Sbjct: 134 GGLKVKELREKTGSRIKI----YTSCCPMSTDRVVQITGKPNTCSDCVREVLDLLKTAPV 189
Query: 218 R 218
+
Sbjct: 190 K 190
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 21/180 (11%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
R + + LR++ P G +IGKGG I+++R + A + V G + ++T+ S
Sbjct: 15 RPKMGPDDIELRVLIPSKVAGSIIGKGGFNISRLRTDYNATVTV--PDCPGPERILTIIS 72
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL------------ISFTTRLLVPTSRIGC 383
++ L E + L+ S + +R R+LV S+ GC
Sbjct: 73 SN--DNALKVLGEVMGNLEDGGS-RFKRGGAGGGQGNNDNQGGETDVDVRMLVHQSQAGC 129
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
+IGKGG + E+R T + I+I D +VQI+G + D + +V+ L+
Sbjct: 130 IIGKGGLKVKELREKTGSRIKIYTS----CCPMSTDRVVQITGKPNTCSDCVREVLDLLK 185
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 55 GSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTV 92
G+IIG+ G ++++R D+ + I IGE GS+ER++T+
Sbjct: 357 GAIIGKAGARIRRIRQDSGAGITIGEPTEGSDERIITI 394
>gi|328702411|ref|XP_003241892.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Acyrthosiphon pisum]
Length = 428
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 95/181 (52%), Gaps = 8/181 (4%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+GP+D R L P + GSIIG+GG + +LR D + + + + PG E R++T+ S++D
Sbjct: 20 MGPDDIELRVLIPSKVAGSIIGKGGFNISRLRTDYNATVTVPD-CPGPE-RILTIISSND 77
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
NA + + + +D + +++ G V ++LV Q GC+IGK
Sbjct: 78 --NALKVLGEVMGNLEDGGSRFKRGGAGGGQGNNDNQGGETDVDVRMLVHQSQAGCIIGK 135
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GG V+ +R +TG++I+I + C + +D +VQI+G+ + + ++ L P
Sbjct: 136 GGLKVKELREKTGSRIKI----YTSCCPMSTDRVVQITGKPNTCSDCVREVLDLLKTAPV 191
Query: 218 R 218
+
Sbjct: 192 K 192
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 21/180 (11%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
R + + LR++ P G +IGKGG I+++R + A + V G + ++T+ S
Sbjct: 17 RPKMGPDDIELRVLIPSKVAGSIIGKGGFNISRLRTDYNATVTV--PDCPGPERILTIIS 74
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL------------ISFTTRLLVPTSRIGC 383
++ L E + L+ S + +R R+LV S+ GC
Sbjct: 75 SN--DNALKVLGEVMGNLEDGGS-RFKRGGAGGGQGNNDNQGGETDVDVRMLVHQSQAGC 131
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
+IGKGG + E+R T + I+I D +VQI+G + D + +V+ L+
Sbjct: 132 IIGKGGLKVKELREKTGSRIKIYTS----CCPMSTDRVVQITGKPNTCSDCVREVLDLLK 187
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 55 GSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTV 92
G+IIG+ G ++++R D+ + I IGE GS+ER++T+
Sbjct: 359 GAIIGKAGARIRRIRQDSGAGITIGEPTEGSDERIITI 396
>gi|440907529|gb|ELR57670.1| RNA-binding protein Nova-2, partial [Bos grunniens mutus]
Length = 298
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 126/279 (45%), Gaps = 41/279 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 8 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 67
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 68 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 124
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P S
Sbjct: 125 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSC 181
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSS 281
L + S ++ GP A + P G A + ++ L
Sbjct: 182 L--------NISYANVAGPVANS---------NPTGLTAEKLAAESAKEL---------- 214
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
+ + P +G ++GKGG + + ++ +GA I++
Sbjct: 215 ----VEIAVPENLVGAILGKGGKTLVEYQELTGARIQIS 249
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 121/299 (40%), Gaps = 79/299 (26%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
K+L+PS G +IGKGGQ + ++ ETGA I++ K + LVQ G A +
Sbjct: 8 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ--GTAEALN 65
Query: 203 KALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD 262
IA ++ + P Q + + N ++ P D
Sbjct: 66 AVHSFIAEKVREIP---QAMTKPEVVN----------------------ILQPQTTMNPD 100
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
A +L+ P + G +IGKGGA + + ++SGA +++ S
Sbjct: 101 RAKQ-------------------AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL-SQ 140
Query: 323 STEG---DDCLITVSSK-EFFEDTLSATIEAVVRLQPRCS-------------------- 358
EG + ++TVS + E +SA ++ V + P+ S
Sbjct: 141 KPEGINLQERVVTVSGEPEQVHKAVSAIVQKV-QEDPQSSSCLNISYANVAGPVANSNPT 199
Query: 359 ----EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPK-ENLP 412
EK+ +S + VP + +G ++GKGG + E + LT A I+I K E LP
Sbjct: 200 GLTAEKLAAESA--KELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP 256
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 4 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 63
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 64 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 121
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 122 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 173
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPG--SEERVVTVYSASDETNAF- 102
+ + P G IIG+GG VK + + + +++ + G +ERVVTV ++ +
Sbjct: 106 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 165
Query: 103 --------EDGDK-------FVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
ED + + A + AE+L + + ++ VP
Sbjct: 166 SAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGLTAEKLAAESAKE-----LVEIAVP 220
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVVKKALC 206
+ +G ++GKGG+ + + TGA+I+I K E LP R V I+G + + A
Sbjct: 221 ENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRR---VTITGSPAATQAAQY 277
Query: 207 QIASRL 212
I+ R+
Sbjct: 278 LISQRV 283
>gi|354490193|ref|XP_003507244.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cricetulus
griseus]
Length = 331
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 144/313 (46%), Gaps = 49/313 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIA------PLMGPYGGYKG 261
S + A +++ G P T + +A P+ G+ G
Sbjct: 173 GVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSG 232
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+ Y A D S++ S L P IG +IG+ GA IN+IRQ SGA IK +
Sbjct: 233 IESSSPEVKGYWAGLDA-SAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTAN 291
Query: 322 SSTEGDDCLITVS 334
D +T++
Sbjct: 292 PVEGSTDRQVTIT 304
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 88/226 (38%), Gaps = 64/226 (28%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY----------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 101 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVK 160
Query: 94 --------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRVIAEE- 127
S F G + Q A L K+H + +
Sbjct: 161 QICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSH 220
Query: 128 ---------LRGDEDS-----------DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIR 166
G E S D Q T+ +L +P+D IGC+IG+ G + IR
Sbjct: 221 FPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIR 280
Query: 167 SETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+GAQI+ +D V I+G A+ + A I RL
Sbjct: 281 QMSGAQIKTANP-----VEGSTDRQVTITGSAASISLAQYLINVRL 321
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|12230430|sp|P57724.1|PCBP4_MOUSE RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|9957163|gb|AAG09239.1|AF176328_1 alphaCP-4 [Mus musculus]
Length = 403
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 144/312 (46%), Gaps = 46/312 (14%)
Query: 39 GPEDTV---YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYS 94
GPE ++ R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+
Sbjct: 11 GPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI-- 65
Query: 95 ASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ T A ++ FK+ + + A G S VT +L++P+ Q G +
Sbjct: 66 -TGSTAAVFHAVSMIA------FKLDEDLCAAPANGGSVSR--PPVTLRLVIPASQCGSL 116
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
IGK G ++ IR TGAQ+++ D LP+ R+ V +SG + + QI + + +
Sbjct: 117 IGKAGTKIKEIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILE 172
Query: 215 NPSRSQH------------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD 262
+P + LL++ S V P T + ++ P+
Sbjct: 173 SPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA----- 227
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
S P D S++ S + P IG VIG+ G+ I++IRQ SGA IK+ +
Sbjct: 228 -------SPSVVPGMDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ 280
Query: 323 STEGDDCLITVS 334
+ + +T++
Sbjct: 281 AEGAGERHVTIT 292
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRI 405
T A +++
Sbjct: 131 TGAQVQV 137
>gi|190344879|gb|EDK36648.2| hypothetical protein PGUG_00746 [Meyerozyma guilliermondii ATCC
6260]
Length = 545
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 146/356 (41%), Gaps = 58/356 (16%)
Query: 3 GQRNSYG-KRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRG 61
G SYG +++ +A+H R + + + P +R CP+++ +IG+
Sbjct: 161 GTTTSYGTSQAYDPVPFANHLDYTSRPMANHQAERESDPTYVSFRMYCPVKEASFVIGKR 220
Query: 62 GEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDA--LFKV 119
G+++ LR ++I++ E + +ER+++V PA++ F +
Sbjct: 221 GDMINHLREKANARIQVSENIKDVQERIISVK----------------GPAENVAKAFGL 264
Query: 120 HDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
R I EE + S Q K+L+P +G +IGKGG + I + A+++ ++
Sbjct: 265 ITRAILEEPEDEPASIMSRQYNLKVLIPHPMVGYIIGKGGSKFREIEENSAAKLK-AAEQ 323
Query: 180 HLPSCALRSDELVQISGEASVVKKALCQIASRL--HDNPSRSQHLLASAISNSHSSSGSL 237
LP+ +D ++ + G + A+ I+ + H + + ++ N+ + ++
Sbjct: 324 PLPNS---TDRVLSVLGVGDAIHIAIYYISQVIIEHKDILKKHKIVYYTPGNNQLMNNTM 380
Query: 238 ----------VGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS------- 280
G PI G AP Y +A ++ P +
Sbjct: 381 GLIPNNTYGNTGIIGNDPIQGGAPFQHNYQRQFQPSAPSHNQITTPVPTQSYTDEHGNTM 440
Query: 281 ---------------SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA-IKVD 320
+ +FS + NIG VIGKGG I QIR+ SG + +K++
Sbjct: 441 IGDVITSVPVPAGTGTDKFSEDVFVANTNIGSVIGKGGNNIKQIRESSGCSYVKIE 496
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS-SKEFFEDTL 343
S R+ CPV VIGK G +IN +R+++ A I+V + + + +I+V E
Sbjct: 203 SFRMYCPVKEASFVIGKRGDMINHLREKANARIQVSENIKDVQERIISVKGPAENVAKAF 262
Query: 344 SATIEAVVRLQPRCSEKIERDSGLIS--FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
A++ E + + ++S + ++L+P +G +IGKGGS E+ + A
Sbjct: 263 GLITRAILE------EPEDEPASIMSRQYNLKVLIPHPMVGYIIGKGGSKFREIEENSAA 316
Query: 402 NIR 404
++
Sbjct: 317 KLK 319
>gi|318054596|ref|NP_001188110.1| poly(rC)-binding protein 2 [Ictalurus punctatus]
gi|308322769|gb|ADO28522.1| poly(rc)-binding protein 2 [Ictalurus punctatus]
Length = 318
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 144/310 (46%), Gaps = 56/310 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTT-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +++VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFSMII-DKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGTPLSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIAPLMGPYG---GYKGDTA 264
S + A +++ G P T + +A P+ +G TA
Sbjct: 173 GVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPLAPSSQGFTA 232
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
G D +++ S L P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 233 GM-----------DATTQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE 281
Query: 325 EGDDCLITVS 334
+D +T++
Sbjct: 282 GSNDRQVTIT 291
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S++SNS ++S V
Sbjct: 60 TLAGPTTAIFKAFSMIIDKLEED-------ISSSMSNSTATSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LR+V P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRIVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD-SGLIS---------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S +S T R++VP S+ G LIGKGG I
Sbjct: 62 AGPTTAIFKAFSMIIDKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|313226221|emb|CBY21364.1| unnamed protein product [Oikopleura dioica]
Length = 545
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 167/378 (44%), Gaps = 61/378 (16%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSA 95
G DT + L P +G+IIG+GG V+Q+ S+ R+ PGS+ +V T+Y A
Sbjct: 176 GSPDTPLKMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRREGPGSD-KVATIYGA 234
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVI 155
+ A A ++ + V EE +++ K+L + IG +I
Sbjct: 235 PEACGA-------------AAIRILEIVRKEE--------KDNELPLKVLAHNALIGRLI 273
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH-- 213
G+ G+ +++++ +TG +I I L + D + I GE + +A QI +L
Sbjct: 274 GRDGRNLKHVQDKTGTRIAISSMHELSPYNM--DRTISIHGEVKGISEAEQQITEKLRQF 331
Query: 214 --DNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
D + SQ L +++ + A P ++ Y+G+++ +
Sbjct: 332 ETDMAAMSQQSLYPGLNSQQMQMFPGLQSPTAPPAYNVS--------YQGNSSSN----- 378
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
+ + ++ L+ P +G +IG G I I + +GA+I++ + E D
Sbjct: 379 ---------NTQETVTLLIPSGAVGAIIGSRGTHIRNISRIAGASIRIHALEGENADADR 429
Query: 332 TVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS----FTTRLLVPTSRIGCLIGK 387
++ T+ E+ + Q +K++++ + TT++ +P +G +IGK
Sbjct: 430 DAKARV----TIVGVPESQWKAQFCIFDKLKQEGWFGNEEGRLTTQITIPGKLVGRIIGK 485
Query: 388 GGSIITEMRRLTKANIRI 405
GG + E++R+T + + I
Sbjct: 486 GGVNVRELQRITSSEVTI 503
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 14/165 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE--GDDCLITVSSKEF 338
S + L+++ P + +G +IGKGG+ + QI Q + +VD E G D + T+
Sbjct: 177 SPDTPLKMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRREGPGSDKVATIYGAPE 236
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
+ I +VR K E+D+ L ++L + IG LIG+ G + ++
Sbjct: 237 ACGAAAIRILEIVR-------KEEKDNEL---PLKVLAHNALIGRLIGRDGRNLKHVQDK 286
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
T I I L D + I G++ +A Q+ +LR
Sbjct: 287 TGTRIAISSMHELSPYNM--DRTISIHGEVKGISEAEQQITEKLR 329
>gi|196001809|ref|XP_002110772.1| hypothetical protein TRIADDRAFT_54022 [Trichoplax adhaerens]
gi|190586723|gb|EDV26776.1| hypothetical protein TRIADDRAFT_54022 [Trichoplax adhaerens]
Length = 560
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 177/388 (45%), Gaps = 58/388 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG--ETVPGSEERVVTVYSASDE-TNAF 102
R L P +G+IIGR G ++ + T++++ + E++ GS E+ +T+ D T+A
Sbjct: 141 RILVPTEMVGAIIGREGNTIRSITQQTQARVDVHRRESL-GSAEKAITILGTPDSCTSAA 199
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH---QVTAKLLVPSDQIGCVIGKGG 159
K + Q L + ++ +L+ ++ GH + K+L ++ IG +IGK G
Sbjct: 200 LQIAKIM---QSELLSTNPQL---KLKVEQ----GHPIPNIPLKILAHNNLIGRLIGKNG 249
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN---- 215
++++I ++T ++I I K E L S S+ + + G +A ++++L
Sbjct: 250 NVIKSIMNQTNSKITISKLEDLKSGY--SERTITVIGTVENSSRAEALLSAKLRSYYKQD 307
Query: 216 -----PSRS------------QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGG 258
P R + L+++ ++S S SGSL+ A I+PL P
Sbjct: 308 MASMIPQRQGQSSANSNSNGSSYPLSNSTTSSVSDSGSLIDSAA------ISPLSIP--- 358
Query: 259 YKGDTAGDWSRSLYSAPRDDLSSKEF-SLRLVCPVANIGGVIGKGGAIINQIRQESGAAI 317
+G +S + D++ S E + + P+ VIG G + + Q SGA++
Sbjct: 359 --NSPSGLFSNNSVFLENDNVQSDEIETTAIYIPIQTFNYVIGARGNQLPALEQISGASL 416
Query: 318 KVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVP 377
++ S G + K S+ +A + + + E + L S T +LVP
Sbjct: 417 QLVQSMYSGAN-----ERKVVVNGNASSQWKAQLSIFNKVGEGLTPSEEL-SLRTEILVP 470
Query: 378 TSRIGCLIGKGGSIITEMRRLTKANIRI 405
+ +G +IGKGGS + +++ T A I I
Sbjct: 471 SPLVGRIIGKGGSTVRQLQSQTGAMIEI 498
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFFED 341
EF LR++ P +G +IG+ G I I Q++ A + V + G + IT+ +
Sbjct: 137 EFPLRILVPTEMVGAIIGREGNTIRSITQQTQARVDVHRRESLGSAEKAITILGTP--DS 194
Query: 342 TLSATIEAVVRLQ-------PRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITE 394
SA ++ +Q P+ K+E+ + + ++L + IG LIGK G++I
Sbjct: 195 CTSAALQIAKIMQSELLSTNPQLKLKVEQGHPIPNIPLKILAHNNLIGRLIGKNGNVIKS 254
Query: 395 MRRLTKANIRILPKENLPKIASE 417
+ T + I I E+L SE
Sbjct: 255 IMNQTNSKITISKLEDLKSGYSE 277
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 261 GDTAGDWSR--SLYSAPRDDLS-SKEFSLR--LVCPVANIGGVIGKGGAIINQIRQESGA 315
G+ + W S+++ + L+ S+E SLR ++ P +G +IGKGG+ + Q++ ++GA
Sbjct: 435 GNASSQWKAQLSIFNKVGEGLTPSEELSLRTEILVPSPLVGRIIGKGGSTVRQLQSQTGA 494
Query: 316 AIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR 352
I++ +GD + + I +++R
Sbjct: 495 MIEIPRGMADGDKVSVHIKGTFLASQAAQRRIRSIIR 531
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 351 VRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKEN 410
+R+ PR + R F R+LVPT +G +IG+ G+ I + + T+A + + +E+
Sbjct: 122 IRMSPR---NLTRTPSHCEFPLRILVPTEMVGAIIGREGNTIRSITQQTQARVDVHRRES 178
Query: 411 LPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
L ++ + I G D A +Q+ +++ L
Sbjct: 179 L----GSAEKAITILGTPDSCTSAALQIAKIMQSELL 211
>gi|213511793|ref|NP_001133381.1| poly(rC)-binding protein 2 [Salmo salar]
gi|209152662|gb|ACI33123.1| PolyrC-binding protein 2 [Salmo salar]
Length = 327
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 147/323 (45%), Gaps = 73/323 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTT-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I E+L D S + VT +++VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFSMII-EKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGTPQSIIECVKQICVVMLESPPK 172
Query: 219 SQHL----------------LASAISNSHS-----SSGSLVGPTAATPIVGIA----PL- 252
+ A A+ H+ SS + + P T + +A P
Sbjct: 173 GVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDSSSASISPQ-LTKLHQLAMQQSPFP 231
Query: 253 MGPYG-GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
MGP G++G D S++ S + P IG +IG+ G+ IN+IRQ
Sbjct: 232 MGPNNPGFQGGM--------------DASAQTSSHEMTIPNDLIGCIIGRQGSKINEIRQ 277
Query: 312 ESGAAIKVDSSSTEGDDCLITVS 334
SGA IK+ + D +T++
Sbjct: 278 MSGAQIKIANPVEGSADRQVTIT 300
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS ++S V
Sbjct: 60 TLAGPTTAIFKAFSMIIEKLEED-------ISSSMTNSTATSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LR+V P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRIVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + EK+E D S + + T R++VP S+ G LIGKGG I
Sbjct: 62 AGPTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|401880798|gb|EJT45110.1| telomere length regulating RNA binding protein, Pbp2p [Trichosporon
asahii var. asahii CBS 2479]
Length = 793
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 61/293 (20%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIGR G V ++R + +++ I E++PG+ ER++ V+ A D A
Sbjct: 102 IIGRAGAHVNEIREKSGARVTISESIPGNPERILNVFGALD--------------AVSKA 147
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT K ++P+ ++G VIG+GG ++ I+ +GA++
Sbjct: 148 FGLIVRRINDEPFDVASVPGSRAVTIKFIIPNSRMGSVIGRGGSKIKEIQDASGARLNA- 206
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
+ LP ++ ++ +SG A + A+ I + L + R+ HS G+
Sbjct: 207 SEVMLPGS---TERILSVSGVADAIHIAVYYIGTILLEYQERN--------PGPHSGIGT 255
Query: 237 L----VGPTAATP-IVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCP 291
G AA P G+AP G G ++ ++ P
Sbjct: 256 YRQQPQGMAAAQPSFTGVAP-----GAGGASAPGSQTQQIF-----------------IP 293
Query: 292 VANIGGVIGKGGAIINQIRQESGAAIKVDSSST--------EGDDCLITVSSK 336
+ +G +IGK G+ IN+IR +S I+V T D+ L+T++ +
Sbjct: 294 NSLVGAIIGKAGSKINEIRAQSQCQIRVTEPGTAPGPGQPVNPDERLVTITGQ 346
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 91/197 (46%), Gaps = 21/197 (10%)
Query: 37 IIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSA 95
+ G +++ P ++GS+IGRGG +K+++ + +++ E +PGS ER+++V
Sbjct: 165 VPGSRAVTIKFIIPNSRMGSVIGRGGSKIKEIQDASGARLNASEVMLPGSTERILSVSGV 224
Query: 96 SDE---------TNAFEDGDKFVSPAQD-ALFKVHDRVIA---EELRGDEDSDGGHQV-- 140
+D T E ++ P ++ + +A G GG
Sbjct: 225 ADAIHIAVYYIGTILLEYQERNPGPHSGIGTYRQQPQGMAAAQPSFTGVAPGAGGASAPG 284
Query: 141 --TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA--LRSDE-LVQIS 195
T ++ +P+ +G +IGK G + IR+++ QIR+ + P + DE LV I+
Sbjct: 285 SQTQQIFIPNSLVGAIIGKAGSKINEIRAQSQCQIRVTEPGTAPGPGQPVNPDERLVTIT 344
Query: 196 GEASVVKKALCQIASRL 212
G+ + A+ + RL
Sbjct: 345 GQPVNINIAVQMLYHRL 361
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
+++ S+R + + +IG+ GA +N+IR++SGA + + S + ++ V
Sbjct: 85 AQQISMRALIVTQDASVIIGRAGAHVNEIREKSGARVTISESIPGNPERILNVFGA---L 141
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
D +S +VR + G + T + ++P SR+G +IG+GGS I E++ +
Sbjct: 142 DAVSKAFGLIVRRINDEPFDVASVPGSRAVTIKFIIPNSRMGSVIGRGGSKIKEIQDASG 201
Query: 401 ANI 403
A +
Sbjct: 202 ARL 204
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 83/196 (42%), Gaps = 32/196 (16%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKE-- 337
S+ +++ + P + +G VIG+GG+ I +I+ SGA + G + +++VS
Sbjct: 168 SRAVTIKFIIPNSRMGSVIGRGGSKIKEIQDASGARLNASEVMLPGSTERILSVSGVADA 227
Query: 338 -----FFEDTLSATIE----------AVVRLQPRCSEKIERD-----------SGLISFT 371
++ T+ + R QP+ + S S T
Sbjct: 228 IHIAVYYIGTILLEYQERNPGPHSGIGTYRQQPQGMAAAQPSFTGVAPGAGGASAPGSQT 287
Query: 372 TRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLP---KIASEDDEMVQISGDL 428
++ +P S +G +IGK GS I E+R ++ IR+ P + + D+ +V I+G
Sbjct: 288 QQIFIPNSLVGAIIGKAGSKINEIRAQSQCQIRVTEPGTAPGPGQPVNPDERLVTITGQP 347
Query: 429 DLAKDALIQVMTRLRA 444
A+ + RL A
Sbjct: 348 VNINIAVQMLYHRLEA 363
>gi|406697218|gb|EKD00483.1| telomere length regulating RNA binding protein, Pbp2p [Trichosporon
asahii var. asahii CBS 8904]
Length = 793
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 61/293 (20%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIGR G V ++R + +++ I E++PG+ ER++ V+ A D A
Sbjct: 102 IIGRAGAHVNEIREKSGARVTISESIPGNPERILNVFGALD--------------AVSKA 147
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT K ++P+ ++G VIG+GG ++ I+ +GA++
Sbjct: 148 FGLIVRRINDEPFDVASVPGSRAVTIKFIIPNSRMGSVIGRGGSKIKEIQDASGARLNA- 206
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
+ LP ++ ++ +SG A + A+ I + L + R+ HS G+
Sbjct: 207 SEVMLPGS---TERILSVSGVADAIHIAVYYIGTILLEYQERN--------PGPHSGIGT 255
Query: 237 L----VGPTAATP-IVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCP 291
G AA P G+AP G G ++ ++ P
Sbjct: 256 YRQQPQGMAAAQPSFTGVAP-----GAGGASAPGSQTQQIF-----------------IP 293
Query: 292 VANIGGVIGKGGAIINQIRQESGAAIKVDSSST--------EGDDCLITVSSK 336
+ +G +IGK G+ IN+IR +S I+V T D+ L+T++ +
Sbjct: 294 NSLVGAIIGKAGSKINEIRAQSQCQIRVTEPGTAPGPGQPANPDERLVTITGQ 346
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 88/188 (46%), Gaps = 21/188 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSASDE------ 98
+++ P ++GS+IGRGG +K+++ + +++ E +PGS ER+++V +D
Sbjct: 174 KFIIPNSRMGSVIGRGGSKIKEIQDASGARLNASEVMLPGSTERILSVSGVADAIHIAVY 233
Query: 99 ---TNAFEDGDKFVSPAQD-ALFKVHDRVIA---EELRGDEDSDGGHQV----TAKLLVP 147
T E ++ P ++ + +A G GG T ++ +P
Sbjct: 234 YIGTILLEYQERNPGPHSGIGTYRQQPQGMAAAQPSFTGVAPGAGGASAPGSQTQQIFIP 293
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLP---SCALRSDELVQISGEASVVKKA 204
+ +G +IGK G + IR+++ QIR+ + P A + LV I+G+ + A
Sbjct: 294 NSLVGAIIGKAGSKINEIRAQSQCQIRVTEPGTAPGPGQPANPDERLVTITGQPVNINIA 353
Query: 205 LCQIASRL 212
+ + RL
Sbjct: 354 VQMLYHRL 361
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
+++ S+R + + +IG+ GA +N+IR++SGA + + S + ++ V
Sbjct: 85 AQQISMRALIVTQDASVIIGRAGAHVNEIREKSGARVTISESIPGNPERILNVFGA---L 141
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
D +S +VR + G + T + ++P SR+G +IG+GGS I E++ +
Sbjct: 142 DAVSKAFGLIVRRINDEPFDVASVPGSRAVTIKFIIPNSRMGSVIGRGGSKIKEIQDASG 201
Query: 401 ANI 403
A +
Sbjct: 202 ARL 204
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 32/196 (16%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKE-- 337
S+ +++ + P + +G VIG+GG+ I +I+ SGA + G + +++VS
Sbjct: 168 SRAVTIKFIIPNSRMGSVIGRGGSKIKEIQDASGARLNASEVMLPGSTERILSVSGVADA 227
Query: 338 -----FFEDTLSATIE----------AVVRLQPRCSEKIERD-----------SGLISFT 371
++ T+ + R QP+ + S S T
Sbjct: 228 IHIAVYYIGTILLEYQERNPGPHSGIGTYRQQPQGMAAAQPSFTGVAPGAGGASAPGSQT 287
Query: 372 TRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLP---KIASEDDEMVQISGDL 428
++ +P S +G +IGK GS I E+R ++ IR+ P + A+ D+ +V I+G
Sbjct: 288 QQIFIPNSLVGAIIGKAGSKINEIRAQSQCQIRVTEPGTAPGPGQPANPDERLVTITGQP 347
Query: 429 DLAKDALIQVMTRLRA 444
A+ + RL A
Sbjct: 348 VNINIAVQMLYHRLEA 363
>gi|348528761|ref|XP_003451884.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 317
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 140/311 (45%), Gaps = 59/311 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTT-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I E+L D S + VT +++VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFSMII-EKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGTPQSIIECVKQICVVMLESPPK 172
Query: 219 SQHLLASAISNSHSSSGSLV----GPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
I SGS V G A + G + + D ++ +
Sbjct: 173 -----GVTIPYRPKPSGSPVIFAGGQAYA--------VQGQHAIPQPDLTKLHQLAMQQS 219
Query: 275 PRD-----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
P D S++ S + P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 220 PFPIAPSNQGFTGMDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPV 279
Query: 324 TEGDDCLITVS 334
D +T++
Sbjct: 280 DGSTDRQVTIT 290
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 45/176 (25%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSA-------- 95
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 100 LRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPQSIIECV 159
Query: 96 -----------------------SDETNAFEDGDKFVSPAQDA-----LFKVHDRV---- 123
S F G + Q A L K+H
Sbjct: 160 KQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQS 219
Query: 124 ---IAEELRGDEDSDGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
IA +G D Q ++ ++ +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 220 PFPIAPSNQGFTGMDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 275
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS ++S V
Sbjct: 60 TLAGPTTAIFKAFSMIIEKLEED-------ISSSMTNSTATSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LR+V P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRIVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + EK+E D S + + T R++VP S+ G LIGKGG I
Sbjct: 62 AGPTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|126341837|ref|XP_001363414.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Monodelphis domestica]
Length = 586
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 175/407 (42%), Gaps = 74/407 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI I + G+ E+ +T++++ + +
Sbjct: 197 DVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGASEKPITIHASPEGCS 256
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
++I E ++ + +D+ ++ K+L ++ +G +IGK G
Sbjct: 257 ------------------TACKIIMEIMQKEAQDTKFTDEIPLKILAHNNFVGRLIGKEG 298
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN---- 215
+ ++ I +T +I I + L + + + G KA +I ++ ++
Sbjct: 299 RNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSIETCGKAEEEIMKKIRESYESD 356
Query: 216 ---PSRSQHLLASAISNS-----HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDW 267
+ HLL N+ S+SG T P A PYG
Sbjct: 357 LSAMNLQAHLLPGLNLNALGLFPASTSGIPSPSTLGVPSAAAATNYLPYGQ--------- 407
Query: 268 SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
++ ++ L P +G +IGK G I Q+ + +GA+IK+ T
Sbjct: 408 ------------QAETETVHLFIPAMAVGAIIGKMGQHIKQLSRFAGASIKIAPPETPDA 455
Query: 328 DCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIG 382
+ + ++ EA + Q R K++ ++ + ++ VP+ G
Sbjct: 456 KERMVI---------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAQIKVPSYAAG 506
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
+IGKGG + E++ LT A + ++P++ +P E+DE +V+I+G
Sbjct: 507 RVIGKGGKTVNELQNLTSAEV-VVPRDQIP---DENDEVIVKITGHF 549
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 36/176 (20%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSASDETN 100
+TV+ ++ P +G+IIG+ G+ +KQL + I+I P ++ER+V
Sbjct: 412 ETVHLFI-PAMAVGAIIGKMGQHIKQLSRFAGASIKIAPPETPDAKERMV---------- 460
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIA----EELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
++ +A FK R+ E G ++ ++ A++ VPS G VIG
Sbjct: 461 -------IITGPPEAQFKAQGRIYGKLKEENFFGPKEEV---KLEAQIKVPSYAAGRVIG 510
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKALCQIASR 211
KGG+ V +++ T A++ + +D+ +P +DE +V+I+G CQ+A R
Sbjct: 511 KGGKTVNELQNLTSAEVVVPRDQ-IPD---ENDEVIVKITGHFYA-----CQLAQR 557
>gi|427785521|gb|JAA58212.1| Putative igf-ii mrna-binding protein imp [Rhipicephalus pulchellus]
Length = 657
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 183/433 (42%), Gaps = 90/433 (20%)
Query: 54 IGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNAFEDGDKFVSPA 112
+G+IIGR G ++Q+ +++++ + + GS E+V+T+Y + S A
Sbjct: 217 VGAIIGRAGGTIRQITQQSRARVDVHRKENAGSLEKVITIYGNPEN----------CSTA 266
Query: 113 QDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQ 172
+ +V + + RGD V K+L ++ IG +IGK G ++ I +T +
Sbjct: 267 CQKILEVMQQEASNTNRGD--------VPLKILAHNNLIGRIIGKSGNTIKRIMEQTDTK 318
Query: 173 IRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS 230
I + L D AL + ++ I G+ + +C R++ L+++ + S
Sbjct: 319 ITVSSLHD----GSALHLERVITIKGKP----EGVC-----------RAEQLVSAKLRQS 359
Query: 231 HSSSGSLVGPTAATPIVGIAPL--MGPY-------------------------------- 256
+ S + + P + G+ P+ M Y
Sbjct: 360 YESDLAALAPQSLM-FPGLHPMAMMSAYPPPPPPHGPPARPPHYRGGGGGGPYPHPPAVG 418
Query: 257 GGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA 316
GGY G A Y +P +E + L P +G +IG GG+ I + SGA+
Sbjct: 419 GGYMGG-AVHGPMGGYMSPSHGGVEREL-VCLYIPNTAVGAIIGTGGSSIRDMIMLSGAS 476
Query: 317 IKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLI----SFTT 372
IKV + DD K T+ T E R Q K+ + + +
Sbjct: 477 IKV--AQPNKDDPADAHERKV----TIVGTPECQWRAQSMIFNKVCYEGCMGNPDGTLRV 530
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAK 432
+ VP++++G +IGKGG + E++RLT+A I+ LP+E+ + A+ ++ V I GD
Sbjct: 531 EIFVPSNQVGRIIGKGGQTVRELQRLTRALIK-LPEES--QNANTEETPVHILGDFFSTH 587
Query: 433 DALIQVMTRLRAN 445
A Q+ + N
Sbjct: 588 AAQRQIRALVNRN 600
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 65/133 (48%), Gaps = 21/133 (15%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET----VPGSEERVVTVYSASDETNAFEDG 105
P +G+IIG GG ++ + + + + I++ + + ER VT+ +
Sbjct: 451 PNTAVGAIIGTGGSSIRDMIMLSGASIKVAQPNKDDPADAHERKVTIVGTPECQWR---- 506
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
AQ +F ++V E G+ D + ++ VPS+Q+G +IGKGGQ V+ +
Sbjct: 507 ------AQSMIF---NKVCYEGCMGNPDGT----LRVEIFVPSNQVGRIIGKGGQTVREL 553
Query: 166 RSETGAQIRILKD 178
+ T A I++ ++
Sbjct: 554 QRLTRALIKLPEE 566
>gi|291393785|ref|XP_002713277.1| PREDICTED: poly(rC) binding protein 4 [Oryctolagus cuniculus]
Length = 403
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 140/297 (47%), Gaps = 33/297 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVFH 74
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 75 AVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLA 224
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P + +
Sbjct: 127 IRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATI-- 180
Query: 225 SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYK-----GDTAGDWSRSLYSA--PRD 277
S S L+ P+ G + P K G S S+ P
Sbjct: 181 -PYHPSLSLGTVLLSANQGFPVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPGT 239
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
SS+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T++
Sbjct: 240 QTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 292
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRI 405
T A +++
Sbjct: 131 TGAQVQV 137
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 126/315 (40%), Gaps = 86/315 (27%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHD----------NPSRSQHLLASAISNSHSSSGSLVGP 240
+ I+G + V A+ IA +L + N SR L I S GSL+G
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQC--GSLIG- 118
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWSRS----------------------LYSAPRDD 278
A T I I G GD + + L S P+
Sbjct: 119 KAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGA 178
Query: 279 LSSKEFSLRL--VCPVANIG-GVIGKGGAI----INQIRQESGAAIKVDSSST-EGDDCL 330
SL L V AN G V G+ GA+ + +++Q SG A+ S S G D
Sbjct: 179 TIPYHPSLSLGTVLLSANQGFPVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPG 238
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGS 390
SS+EF LVP IGC+IG+ GS
Sbjct: 239 TQTSSQEF------------------------------------LVPNDLIGCVIGRQGS 262
Query: 391 IITEMRRLTKANIRI 405
I+E+R+++ A+I+I
Sbjct: 263 KISEIRQMSGAHIKI 277
>gi|12837891|dbj|BAB23990.1| unnamed protein product [Mus musculus]
Length = 403
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 144/312 (46%), Gaps = 46/312 (14%)
Query: 39 GPEDTV---YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYS 94
GPE ++ R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+
Sbjct: 11 GPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI-- 65
Query: 95 ASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ T A ++ FK+ + + A G S VT +L++P+ Q G +
Sbjct: 66 -TGSTAAVFHAVSMIA------FKLDEDLCAAPANGGSVSR--PPVTLRLVIPASQCGSL 116
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
IGK G ++ IR TGAQ+++ D LP+ R+ V +SG + + QI + + +
Sbjct: 117 IGKAGTKIKEIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILE 172
Query: 215 NPSRSQH------------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD 262
+P + LL++ S V P T + ++ P+
Sbjct: 173 SPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA----- 227
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
S P D S++ S + P IG VIG+ G+ I++IRQ SGA IK+ +
Sbjct: 228 -------SPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ 280
Query: 323 STEGDDCLITVS 334
+ + +T++
Sbjct: 281 AEGAGERHVTIT 292
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRI 405
T A +++
Sbjct: 131 TGAQVQV 137
>gi|77736367|ref|NP_001029883.1| poly(rC)-binding protein 2 [Bos taurus]
gi|157057549|ref|NP_035172.2| poly(rC)-binding protein 2 isoform 2 [Mus musculus]
gi|291389257|ref|XP_002711065.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
gi|348581077|ref|XP_003476304.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cavia porcellus]
gi|426224370|ref|XP_004006344.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Ovis aries]
gi|74268197|gb|AAI03398.1| Poly(rC) binding protein 2 [Bos taurus]
gi|119617114|gb|EAW96708.1| poly(rC) binding protein 2, isoform CRA_c [Homo sapiens]
gi|148672028|gb|EDL03975.1| poly(rC) binding protein 2, isoform CRA_b [Mus musculus]
gi|149031923|gb|EDL86835.1| rCG50739, isoform CRA_d [Rattus norvegicus]
gi|296487920|tpg|DAA30033.1| TPA: poly(rC) binding protein 2 [Bos taurus]
Length = 349
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 140/327 (42%), Gaps = 59/327 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVT 175
Query: 212 --LHDNPSRSQHLLAS----------AISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
PS S + A + S H++ + P P + + G Y
Sbjct: 176 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP 235
Query: 260 KGDTAGDWSRSLYSA--PRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
+ D ++ + P D S++ S L P IG +IG+ GA IN
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKIN 295
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITVS 334
+IRQ SGA IK+ + D +T++
Sbjct: 296 EIRQMSGAQIKIANPVEGSTDRQVTIT 322
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I +D V
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVT 320
Query: 194 ISGEASVVKKALCQIASRL 212
I+G A+ + A I RL
Sbjct: 321 ITGSAASISLAQYLINVRL 339
>gi|227497228|ref|NP_067542.3| poly(rC)-binding protein 4 [Mus musculus]
gi|14715061|gb|AAH10694.1| Poly(rC) binding protein 4 [Mus musculus]
Length = 403
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 144/312 (46%), Gaps = 46/312 (14%)
Query: 39 GPEDTV---YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYS 94
GPE ++ R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+
Sbjct: 11 GPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI-- 65
Query: 95 ASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ T A ++ FK+ + + A G S VT +L++P+ Q G +
Sbjct: 66 -TGSTAAVFHAVSMIA------FKLDEDLCAAPANGGSVSR--PPVTLRLVIPASQCGSL 116
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
IGK G ++ IR TGAQ+++ D LP+ R+ V +SG + + QI + + +
Sbjct: 117 IGKAGTKIKEIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILE 172
Query: 215 NPSRSQH------------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD 262
+P + LL++ S V P T + ++ P+
Sbjct: 173 SPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA----- 227
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
S P D S++ S + P IG VIG+ G+ I++IRQ SGA IK+ +
Sbjct: 228 -------SPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ 280
Query: 323 STEGDDCLITVS 334
+ + +T++
Sbjct: 281 AEGAGERHVTIT 292
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRI 405
T A +++
Sbjct: 131 TGAQVQV 137
>gi|327267261|ref|XP_003218421.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Anolis carolinensis]
Length = 576
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 175/391 (44%), Gaps = 58/391 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K L T+SK+ I + G+ E+ +T+++ + +
Sbjct: 192 DFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGCS 251
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
+A + D + E E++ ++ K+L + +G +IGK G+
Sbjct: 252 -------------EACRMILDIMQKE----AEETKSAEEIPLKILAHNSLVGRLIGKEGR 294
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPS 217
++ I +TG +I I + L + + + G A +I ++L ++N
Sbjct: 295 NLKKIEQDTGTKITISPLQDL--TIYNPERTITVKGSIEACSNAEAEIMNKLREAYENDI 352
Query: 218 RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD 277
+ + A+ I + ++ + G++ M P G A + ++ P
Sbjct: 353 VTVNQQANLIPGLNLNALGIFS-------TGLS--MLPSGTGVRRPAVSTPYNPFAVPEQ 403
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-DSSSTEGDDCLITVSSK 336
++ + L P +G +IGK G I Q+ + +GA+IK+ + S E + ++ ++
Sbjct: 404 EV------VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPEASERMVIITGP 457
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSI 391
EA + Q R K++ ++ + + VP+S G +IGKGG
Sbjct: 458 P----------EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIKVPSSAAGRVIGKGGKT 507
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+ E++ LT A + I+P++ P E++E+V
Sbjct: 508 VNELQNLTSAEV-IVPRDQTP---DENEEVV 534
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSASDE 98
PE V P + +G+IIG+ G+ +KQL + I+I P + ER+V + + E
Sbjct: 401 PEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPEASERMVII-TGPPE 459
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 460 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIKVPSSAAGRVIGKG 504
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 505 GKTVNELQNLTSAEVIVPRDQ 525
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 71/162 (43%), Gaps = 9/162 (5%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG-DDCLITVSSKEFFED 341
+F LR++ P +G +IGK G I + +++ + + + G + IT+ +
Sbjct: 192 DFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHA------ 245
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
T EA + ++ E ++L S +G LIGK G + ++ + T
Sbjct: 246 TPEGCSEACRMILDIMQKEAEETKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQDTGT 305
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
I I P ++L + + + G ++ +A ++M +LR
Sbjct: 306 KITISPLQDL--TIYNPERTITVKGSIEACSNAEAEIMNKLR 345
>gi|317418810|emb|CBN80848.1| PolyrC-binding protein 2 [Dicentrarchus labrax]
Length = 306
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 140/311 (45%), Gaps = 59/311 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTT-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I E+L D S + VT +++VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFSMII-EKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGTPQSIIECVKQICVVMLESPPK 172
Query: 219 SQHLLASAISNSHSSSGSLV----GPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
I SGS V G A + G + + D ++ +
Sbjct: 173 -----GVTIPYRPKPSGSPVIFAGGQAYA--------VQGQHAIPQPDLTKLHQLAMQQS 219
Query: 275 PRD-----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
P D S++ S + P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 220 PFPIAPSNQGFTGIDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPV 279
Query: 324 TEGDDCLITVS 334
D +T++
Sbjct: 280 DGSTDRQVTIT 290
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS ++S V
Sbjct: 60 TLAGPTTAIFKAFSMIIEKLEED-------ISSSMTNSTATSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LR+V P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRIVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + EK+E D + T R++VP S+ G LIGKGG I
Sbjct: 62 AGPTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|343427422|emb|CBQ70949.1| related to PBP2-PAB1 binding protein [Sporisorium reilianum SRZ2]
Length = 416
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 28/265 (10%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIG+ G+ + ++R + +++ I E +PG+ ER++TV D A
Sbjct: 127 IIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVSGPLD--------------AVSKA 172
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT + +VP+ ++G VIGK G ++ I+ +GA++
Sbjct: 173 FGLIVRRINDEPFDQPSVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGARL-TA 231
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
+ LP R ++ ISG A V A+ + + L ++ R+ + L ++G
Sbjct: 232 GEAMLPGSTER---VLSISGVADAVHIAVYYVGTILLEHQDRNANNLP-----YRPTAG- 282
Query: 237 LVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
GP+ P G P P GY + L + ++ P
Sbjct: 283 --GPSTRPPAPGANPYAAPQQPFGYGAPAPPFGGAPAGAGGAPQLPPGSQTQQIFIPNDL 340
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
+G +IGKGG+ IN+IR S + IK+
Sbjct: 341 VGCIIGKGGSKINEIRSMSASHIKI 365
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 13/163 (7%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
+ S+R + ++ +IGK G IN+IR +S A + + + ++TVS D
Sbjct: 112 QISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVSGPL---DA 168
Query: 343 LSATIEAVVRLQPRCS-EKIERDS--GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
+S +VR R + E ++ S G S T R +VP SR+G +IGK GS I E++ +
Sbjct: 169 VSKAFGLIVR---RINDEPFDQPSVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEAS 225
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
A R+ E + + + ++ ISG D A+ V T L
Sbjct: 226 GA--RLTAGEAM--LPGSTERVLSISGVADAVHIAVYYVGTIL 264
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEAS 199
T ++ +P+D +GC+IGKGG + IRS + + I+I++ + +E LV I+G
Sbjct: 331 TQQIFIPNDLVGCIIGKGGSKINEIRSMSASHIKIMEPGAGIAAGGSGNERLVTITGPPP 390
Query: 200 VVKKALCQIASRLH 213
++ A+ + RL
Sbjct: 391 NIQMAVSLLYQRLE 404
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 369 SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL-PKENLPKIASEDDEMVQISG- 426
S T ++ +P +GC+IGKGGS I E+R ++ ++I+I+ P + S ++ +V I+G
Sbjct: 329 SQTQQIFIPNDLVGCIIGKGGSKINEIRSMSASHIKIMEPGAGIAAGGSGNERLVTITGP 388
Query: 427 --DLDLAKDALIQVMTRLRANL 446
++ +A L Q + + + L
Sbjct: 389 PPNIQMAVSLLYQRLEQEKMRL 410
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 26 RRYTGDDRDQ-FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-P 83
RR + DQ + G + R++ P ++GS+IG+ G +K+++ + +++ GE + P
Sbjct: 178 RRINDEPFDQPSVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGARLTAGEAMLP 237
Query: 84 GSEERVVTVYSASD 97
GS ERV+++ +D
Sbjct: 238 GSTERVLSISGVAD 251
>gi|426217760|ref|XP_004003120.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Ovis aries]
Length = 599
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 179/399 (44%), Gaps = 51/399 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN---- 215
+ ++ I ETG +I I + L + + + G A +I +L +
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 352
Query: 216 --PSRSQHLLASAISNS----HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ Q L ++ S S+ S++ P A AP P+ + G +
Sbjct: 353 MLAANQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSLCPP 412
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 413 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 470
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 471 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 523
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 524 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 558
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 425 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 483
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 484 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 528
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 529 GKTVNELQNLTSAEVIVPRDQ 549
>gi|126314788|ref|XP_001377551.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2,
partial [Monodelphis domestica]
Length = 504
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 186/417 (44%), Gaps = 59/417 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G +K L T+SK+ I + G+ E+ VT++++ +
Sbjct: 92 PPDFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGASEKPVTIHASPEG 151
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
++ + R++ + +++ +V K+L + +G +IGK
Sbjct: 152 SS-----------------EACRRILEIMQKEADETKAVEEVPLKILAHNSLVGRLIGKE 194
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +TG +I I + L + + + G A +I +L ++N
Sbjct: 195 GRNLKKIEQDTGTKITISPLQDL--TIYNPERTITVKGTIEACSSAEVEIMRKLREAYEN 252
Query: 216 PSRSQHLLASAISNSH------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + S I + S+G + P+AA P A P+ + +G
Sbjct: 253 DMLTVNQQGSLIPGLNLSALGIFSTGLSMLPSAAGPRGAAAASYNPFASHSAYLSG---- 308
Query: 270 SLYSAPRDDLSSKEFSL------RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
LY AP+ + + + L P +G +IGK G I Q+ + + A+IK+ +
Sbjct: 309 -LYGAPQIGVFPHQHPVPEQEVVYLFIPTQAVGAIIGKKGHHIKQLARFARASIKI--AP 365
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPT 378
EG D V + ++ EA + Q R K++ ++ + + VP+
Sbjct: 366 AEGPD----VGERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLKAHIRVPS 418
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
S G +IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 419 SAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVKIIGHFFASQTA 471
>gi|432857624|ref|XP_004068722.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 317
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 140/311 (45%), Gaps = 59/311 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTT-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I E+L D S + VT +++VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFSMII-EKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGTPQSIIECVKQICVVMLESPPK 172
Query: 219 SQHLLASAISNSHSSSGSLV----GPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
I SGS V G A + G + + D ++ +
Sbjct: 173 -----GVTIPYRPKPSGSPVIFAGGQAYA--------VQGQHAIPQPDLTKLHQLAMQQS 219
Query: 275 PRD-----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
P D S++ S + P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 220 PFPIAPSNQGFTGIDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPV 279
Query: 324 TEGDDCLITVS 334
D +T++
Sbjct: 280 DGSTDRQVTIT 290
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 45/176 (25%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSA-------- 95
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 100 LRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPQSIIECV 159
Query: 96 -----------------------SDETNAFEDGDKFVSPAQDA-----LFKVHDRV---- 123
S F G + Q A L K+H
Sbjct: 160 KQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQS 219
Query: 124 ---IAEELRGDEDSDGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
IA +G D Q ++ ++ +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 220 PFPIAPSNQGFTGIDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 275
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS ++S V
Sbjct: 60 TLAGPTTAIFKAFSMIIEKLEED-------ISSSMTNSTATSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LR+V P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRIVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + EK+E D S + + T R++VP S+ G LIGKGG I
Sbjct: 62 AGPTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|291327528|ref|NP_001167544.1| poly(rC)-binding protein 2 isoform 4 [Mus musculus]
gi|348581081|ref|XP_003476306.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cavia porcellus]
gi|74149644|dbj|BAE36444.1| unnamed protein product [Mus musculus]
gi|194378584|dbj|BAG63457.1| unnamed protein product [Homo sapiens]
gi|417398924|gb|JAA46495.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 322
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 138/310 (44%), Gaps = 52/310 (16%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 175
Query: 212 ------LHDNPSRSQHLLASAISNSHSSSGSLVGPTA-ATPIVGIAPLMGPYGGYKGDTA 264
PS S + A +++ G P T + +A + G+T
Sbjct: 176 KGVTIPYRPKPSSSPVIFAGG--QAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTG 233
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
+S L D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 234 --FSAGL------DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE 285
Query: 325 EGDDCLITVS 334
D +T++
Sbjct: 286 GSTDRQVTIT 295
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 87/217 (40%), Gaps = 55/217 (25%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY----------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 101 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVK 160
Query: 94 ------------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRVI 124
S F G + Q A L K+H +
Sbjct: 161 QICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAM 220
Query: 125 AEE----LRGDEDSDGGHQVTAK-----LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
+ G+ G +A+ L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 221 QQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 280
Query: 176 LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+D V I+G A+ + A I RL
Sbjct: 281 ANP-----VEGSTDRQVTITGSAASISLAQYLINVRL 312
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|426340771|ref|XP_004034301.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Gorilla gorilla
gorilla]
gi|426340773|ref|XP_004034302.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Gorilla gorilla
gorilla]
gi|426340775|ref|XP_004034303.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Gorilla gorilla
gorilla]
Length = 403
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 140/302 (46%), Gaps = 43/302 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVFH 74
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 75 AVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH--- 221
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 127 IRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIPY 182
Query: 222 ---------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLY 272
LL++ S V PT T + ++ P+ D
Sbjct: 183 HPSLSLGTVLLSANQGFSVQGQYGAVTPTEVTKLQQLSSHAVPFATPSVVPGLD------ 236
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T
Sbjct: 237 --PGTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVT 290
Query: 333 VS 334
++
Sbjct: 291 IT 292
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRI 405
T A +++
Sbjct: 131 TGAQVQV 137
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 129/298 (43%), Gaps = 52/298 (17%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHD----------NPSRSQHLLASAISNSHSSSGSLVGP 240
+ I+G + V A+ IA +L + N SR L I S GSL+G
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQC--GSLIG- 118
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWS-RSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
A T I I G GD + + R++ + D + +R +C
Sbjct: 119 KAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPD--AIILCVRQIC--------- 167
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE---DTLSATIEAVVRLQPR 356
A+I + GA I S + G + +S+ + F + T V +LQ
Sbjct: 168 ----AVILE-SPPKGATIPYHPSLSLGT---VLLSANQGFSVQGQYGAVTPTEVTKLQQL 219
Query: 357 CSEKIE---------RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
S + D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 220 SSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>gi|348537598|ref|XP_003456280.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 593
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 142/333 (42%), Gaps = 76/333 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R ++ ++I I E GS ER++T+ +D F
Sbjct: 131 RLLMHGKEVGSIIGKKGETVKRIREESSARINISE---GSCPERIITITGPTD--CVFRA 185
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
FK+ + ++A G S VT +L++P+ Q G +IGKGG ++
Sbjct: 186 FTMIT-------FKLEEDLMALVANGTVTSK--PPVTLRLVIPASQCGSLIGKGGSKIKE 236
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVV---KKALCQIASR---------L 212
IR TGAQ+++ D LP+ R V ISG + K +C +
Sbjct: 237 IRETTGAQVQVAGD-LLPNSTERE---VTISGSQDAIIQCVKLICTVILESPPKGATIPY 292
Query: 213 HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWS-RSL 271
+P+ LLA S GS P+ +A GG D ++ +S
Sbjct: 293 RPSPTPGTVLLAGNQVFEASDFGS-------HPLFSVA-----QGGV--DLQQTYAVQSH 338
Query: 272 YSAPRDDLS------------------------------SKEFSLRLVCPVANIGGVIGK 301
Y P +L+ S+ S L+ P IG +IG+
Sbjct: 339 YGIPHSELAKLHQLSMQQQGLAPISQSATQVLPGGVEANSQTTSQELLIPNDLIGSIIGR 398
Query: 302 GGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
G IN+IRQ SGA IK+ S D +T+S
Sbjct: 399 QGTKINEIRQVSGAQIKIGSQIDSTSDRHVTIS 431
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 32/165 (19%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS--------TEGDDCLI---T 332
+LRL+ +G +IGK G + +IR+ES A I + S T DC+ T
Sbjct: 128 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISEGSCPERIITITGPTDCVFRAFT 187
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + + ED ++ V +P T RL++P S+ G LIGKGGS I
Sbjct: 188 MITFKLEEDLMALVANGTVTSKP-------------PVTLRLVIPASQCGSLIGKGGSKI 234
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQ 437
E+R T A +++ + LP + + V ISG ++DA+IQ
Sbjct: 235 KEIRETTGAQVQVA-GDLLP---NSTEREVTISG----SQDAIIQ 271
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 60/187 (32%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
D G +T +LL+ ++G +IGK G+ V+ IR E+ A+I I + SC R ++
Sbjct: 121 DGAMGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISEG----SCPER---II 173
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
I+G V +A I +L ++ L + ++N G + P V
Sbjct: 174 TITGPTDCVFRAFTMITFKLEED-------LMALVAN---------GTVTSKPPV----- 212
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 213 --------------------------------TLRLVIPASQCGSLIGKGGSKIKEIRET 240
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 241 TGAQVQV 247
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 135 DGGHQVTAK-LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
+ Q T++ LL+P+D IG +IG+ G + IR +GAQI+I + S SD V
Sbjct: 375 EANSQTTSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKI--GSQIDST---SDRHVT 429
Query: 194 ISGEASVVKKALCQIASRLHDNPSRSQ 220
ISG + A I S L S +Q
Sbjct: 430 ISGTPIAINLAQYLITSCLETAKSTAQ 456
>gi|291394537|ref|XP_002713869.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Oryctolagus cuniculus]
Length = 517
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/420 (21%), Positives = 186/420 (44%), Gaps = 63/420 (15%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 131 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 190
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + +D+ ++ K+L ++ +G +IGK
Sbjct: 191 TSA----------ACKSILEIMHK-------EAQDTKFTEEIPLKILAHNNFVGRLIGKE 233
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 234 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSVETCAKAEEEIMKKIRESYEN 291
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I P + + L S + P
Sbjct: 292 DIASMNLQAHLI-----------------PGLNLNALGLFPPTPGMPPPTPGPPSAMAPP 334
Query: 276 RDDLSSKEF-SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
L E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 335 YPPLEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV 392
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGG 389
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 393 -------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGG 445
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 446 KTVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 501
>gi|296189557|ref|XP_002742821.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Callithrix
jacchus]
Length = 375
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 141/318 (44%), Gaps = 64/318 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I+I E ER++T+ + TNA
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIRKESGARIKILEG--NCPERIITL---TGPTNAIFKA 71
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ ++K+ + + + + S VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 72 FAMI------IYKLEEDINSSMTKSTAAS---RLVTLRLVVPATQCGSLIGKGGCKIKEI 122
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN---------- 215
R TGAQ+++ D LP+ R+ + I+G V K + QI + +
Sbjct: 123 RKSTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTKCVKQICLVMLETLSHSPQGKVK 178
Query: 216 -------PSRS-------QHLLASAISNSHSSSGSLVGPTAATPIVG---IAPL------ 252
PSRS Q + A H++ P A I G I+PL
Sbjct: 179 TILYQPMPSRSPVTCAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLNLAKLN 238
Query: 253 -----------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGK 301
M G+ G + Y A D +S + + L P IG +IG+
Sbjct: 239 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQITHELTIPNNLIGCIIGR 296
Query: 302 GGAIINQIRQESGAAIKV 319
G IN+IRQ SGA IK+
Sbjct: 297 QGTNINEIRQMSGAQIKI 314
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 5/123 (4%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA IK+ + +T + F+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIRKESGARIKILEGNCPERIITLTGPTNAIFK--- 70
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTT-RLLVPTSRIGCLIGKGGSIITEMRRLTKAN 402
A + +L+ + + + + T RL+VP ++ G LIGKGG I E+R+ T A
Sbjct: 71 -AFAMIIYKLEEDINSSMTKSTAASRLVTLRLVVPATQCGSLIGKGGCKIKEIRKSTGAQ 129
Query: 403 IRI 405
+++
Sbjct: 130 VQV 132
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 61/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I+IL+ +C R ++ ++G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIRKESGARIKILEG----NCPER---IITLTGPTN 66
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ I++S + S TAA+ +V
Sbjct: 67 AIFKAFAMIIYKLEED-----------INSSMTKS------TAASRLV------------ 97
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 98 -------------------------TLRLVVPATQCGSLIGKGGCKIKEIRKSTGAQVQV 132
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 127 ELRGDEDS-DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
E++G S D Q+T +L +P++ IGC+IG+ G + IR +GAQI+I
Sbjct: 265 EVKGYWASLDASTQITHELTIPNNLIGCIIGRQGTNINEIRQMSGAQIKIANP-----VE 319
Query: 186 LRSDELVQISGEASVVKKALCQIASRL 212
S V I+G A+ + A I +RL
Sbjct: 320 GSSGRQVTITGSAASISLAQYLIKARL 346
>gi|354490195|ref|XP_003507245.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cricetulus
griseus]
Length = 349
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 139/327 (42%), Gaps = 59/327 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVT 175
Query: 212 --LHDNPSRSQHLLAS----------AISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
PS S + A + S H++ + P P + + G Y
Sbjct: 176 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP 235
Query: 260 KGDTAGDWSRSLYSA--PRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
+ D ++ + P D S++ S L P IG +IG+ GA IN
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKIN 295
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITVS 334
+IRQ SGA IK + D +T++
Sbjct: 296 EIRQMSGAQIKTANPVEGSTDRQVTIT 322
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+ +D V
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANP-----VEGSTDRQVT 320
Query: 194 ISGEASVVKKALCQIASRL 212
I+G A+ + A I RL
Sbjct: 321 ITGSAASISLAQYLINVRL 339
>gi|354476373|ref|XP_003500399.1| PREDICTED: poly(rC)-binding protein 4 [Cricetulus griseus]
gi|344252773|gb|EGW08877.1| Poly(rC)-binding protein 4 [Cricetulus griseus]
Length = 403
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 139/302 (46%), Gaps = 43/302 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVFH 74
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 75 AVSMIA------FKLDEDLCAAPANGGSVSR--PPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH--- 221
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 127 IRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIPY 182
Query: 222 ---------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLY 272
LL++ S V P T + ++ P+ S
Sbjct: 183 HPSLSLGTVLLSTNQGFSVQGQYGAVAPAEVTKLQQLSGHAVPFA------------SPS 230
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P D S++ S + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T
Sbjct: 231 VVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVT 290
Query: 333 VS 334
++
Sbjct: 291 IT 292
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE--D 341
+LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R T A
Sbjct: 78 MIAFKLDEDLCAAPANGGSVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 402 NIRI 405
+++
Sbjct: 134 QVQV 137
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 60/189 (31%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L +A +N S
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPANGGS------------------ 96
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
+S +LRLV P + G +IGK G I +IR
Sbjct: 97 ----------------------------VSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QESGAAIKV 319
+ +GA ++V
Sbjct: 129 ETTGAQVQV 137
>gi|193083112|ref|NP_001122385.1| poly(rC)-binding protein 2 isoform f [Homo sapiens]
gi|66911068|gb|AAH97410.1| Pcbp2 protein [Rattus norvegicus]
gi|78395095|gb|AAI07689.1| PCBP2 protein [Homo sapiens]
gi|417399138|gb|JAA46599.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 335
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 141/314 (44%), Gaps = 47/314 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA-SRLHDNPS 217
G ++ IR TGAQ+++ D LP+ R+ + I K +C + L +P
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 175
Query: 218 R----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIA------PLMGPYGGYK 260
+ S + A +++ G P T + +A P+ G+
Sbjct: 176 KGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFS 235
Query: 261 GDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
G + Y A D S++ S L P IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 236 GIESSSPEVKGYWAGLDA-SAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA 294
Query: 321 SSSTEGDDCLITVS 334
+ D +T++
Sbjct: 295 NPVEGSTDRQVTIT 308
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 89/230 (38%), Gaps = 68/230 (29%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY----------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 101 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVK 160
Query: 94 ------------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRVI 124
S F G + Q A L K+H +
Sbjct: 161 QICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAM 220
Query: 125 AEE----------LRGDEDS-----------DGGHQVTA-KLLVPSDQIGCVIGKGGQIV 162
+ G E S D Q T+ +L +P+D IGC+IG+ G +
Sbjct: 221 QQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKI 280
Query: 163 QNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
IR +GAQI+I +D V I+G A+ + A I RL
Sbjct: 281 NEIRQMSGAQIKIANP-----VEGSTDRQVTITGSAASISLAQYLINVRL 325
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|302792551|ref|XP_002978041.1| hypothetical protein SELMODRAFT_108378 [Selaginella moellendorffii]
gi|300154062|gb|EFJ20698.1| hypothetical protein SELMODRAFT_108378 [Selaginella moellendorffii]
Length = 324
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 147/331 (44%), Gaps = 50/331 (15%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVY-S 94
G T R+L GS+IG+GG + + + ++I++ E PG+ +RV + S
Sbjct: 11 GETTTNLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSGS 70
Query: 95 ASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+D AF+ +I ++ D++ D + KLLVP G +
Sbjct: 71 LADVLTAFQ-------------------LIISKIIKDDNQDDTKSIQVKLLVPKTVCGAI 111
Query: 155 IGKGGQIVQNIRSETGAQIRI-LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
IGKGG ++ ++ A I++ +D+ LP D +V I G + KA+ I ++L
Sbjct: 112 IGKGGSNIKKFVEDSQASIKLSSQDQLLPGVI---DRIVTIGGNVDQIIKAVTLILTKLT 168
Query: 214 DNPSRSQHLLASAISNSHSSSGSLVGP-TAATPIVGIAPLMGPYGGYKGDTAGDWSRSLY 272
+ S ++ ++S LV P T TP + + Y G +
Sbjct: 169 EESSYTE-----------TTSTPLVYPGTGPTPFI----VRCVYHASPGLQNLRRNGPGP 213
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P + + S+ + P +IG ++G+ G + +++Q SGA IKV S GD
Sbjct: 214 PMPVAYVGALTSSVTIGIPDEHIGFILGRAGKTLQELQQSSGAKIKV---SDRGD----F 266
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIER 363
V+ E+ + T+ + EA+ Q ++K+++
Sbjct: 267 VTGTEYRKVTMIGSGEAIQAAQFLLTQKVQQ 297
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 24/167 (14%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT-- 342
+LR + G VIGKGG+ I+ + +SGA I++ + E+F T
Sbjct: 16 NLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRN-------------HEYFPGTSD 62
Query: 343 ----LSATIEAVVRLQPRCSEKIERDSG---LISFTTRLLVPTSRIGCLIGKGGSIITEM 395
LS ++ V+ KI +D S +LLVP + G +IGKGGS I +
Sbjct: 63 RVAVLSGSLADVLTAFQLIISKIIKDDNQDDTKSIQVKLLVPKTVCGAIIGKGGSNIKKF 122
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
++A+I++ ++ L + D +V I G++D A+ ++T+L
Sbjct: 123 VEDSQASIKLSSQDQL--LPGVIDRIVTIGGNVDQIIKAVTLILTKL 167
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCA 185
E E++ G + LV + G VIGKGG + + ++++GA+I++ ++ E+ P
Sbjct: 2 EFLFAENNAGETTTNLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGT- 60
Query: 186 LRSDELVQISGEASVVKKALCQIASRL 212
SD + +SG + V A I S++
Sbjct: 61 --SDRVAVLSGSLADVLTAFQLIISKI 85
>gi|432092458|gb|ELK25073.1| Poly(rC)-binding protein 4 [Myotis davidii]
Length = 403
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 141/302 (46%), Gaps = 43/302 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVFH 74
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ FK+ + + + G S VT +L++P+ Q G +IGK G ++
Sbjct: 75 AVSMIA------FKLDEDLCSAPANGGTVSR--PPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH--- 221
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 127 IRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIPY 182
Query: 222 ---------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLY 272
LL++ S S V P T + ++ P+G D
Sbjct: 183 HPSLSLGTVLLSANQGFSVQSQYGGVTPAEVTKLQQLSGHAVPFGSPSMVPGLD------ 236
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T
Sbjct: 237 --PGAQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVT 290
Query: 333 VS 334
++
Sbjct: 291 IT 292
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 8/125 (6%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
+LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH--- 74
Query: 344 SATIEAVVRLQPRCSEKIERDSGLIS---FTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
+ ++ A + CS + G +S T RL++P S+ G LIGK G+ I E+R T
Sbjct: 75 AVSMIAFKLDEDLCSAP--ANGGTVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTG 132
Query: 401 ANIRI 405
A +++
Sbjct: 133 AQVQV 137
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 79/189 (41%), Gaps = 60/189 (31%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L SA +N
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCSAPAN--------------------- 93
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
G SR +LRLV P + G +IGK G I +IR
Sbjct: 94 -------------GGTVSR------------PPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QESGAAIKV 319
+ +GA ++V
Sbjct: 129 ETTGAQVQV 137
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 364 DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 236 DPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>gi|432848574|ref|XP_004066413.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 349
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 138/316 (43%), Gaps = 45/316 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R D+ ++I I E ER+VT
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREDSGARINISEG--NCPERIVTXXXXXXXI------ 70
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ +
Sbjct: 71 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 125
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS-------R 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P R
Sbjct: 126 RESTGAQVQVAGD-MLPNSTERA---VTISGAPEAIIQCVKQICVVMLESPPKGATIPYR 181
Query: 219 SQHLLASAISNSHSSSGSLVGPTAAT--------PIVGIAPLMGPYGGYKGDTAGDWSRS 270
+ I + +G + A P+ + G Y D + +
Sbjct: 182 PKPASTPVIFSGGQVRADPLGASTANLSLLLQHQPLPAYT-IQGQYAIPHPDLSKLHQLA 240
Query: 271 LYSAPRD------------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIK 318
+ P D S++ + L P IG +IG+ G IN+IRQ SGA IK
Sbjct: 241 MQQTPFTPLGQTTPAFPGLDASNQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 300
Query: 319 VDSSSTEGDDCLITVS 334
+ ++ + IT++
Sbjct: 301 IANAMEGSSERQITIT 316
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 42/192 (21%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD--DCLITVS------- 334
++RL+ +G +IGK G + ++R++SGA I + +EG+ + ++T
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINI----SEGNCPERIVTXXXXXXXIF 71
Query: 335 ------SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKG 388
+ +F ED +++ + +P T RL+VP S+ G LIGKG
Sbjct: 72 KAFAMIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKG 118
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
GS I EMR T A +++ + LP + + V ISG A +A+IQ + ++ + +
Sbjct: 119 GSKIKEMRESTGAQVQVA-GDMLP---NSTERAVTISG----APEAIIQCVKQICVVMLE 170
Query: 449 R--EGAVSTFVP 458
+GA + P
Sbjct: 171 SPPKGATIPYRP 182
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 80/189 (42%), Gaps = 62/189 (32%)
Query: 133 DSDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
S+GG VT +LL+ ++G +IGK G+ V+ +R ++GA+I I + +C R
Sbjct: 7 QSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISEG----NCPER--- 59
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+V + KA IA + ++ I NS S+S P + P V
Sbjct: 60 IVTXXXXXXXIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV--- 100
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
+LRLV P + G +IGKGG+ I ++R
Sbjct: 101 ----------------------------------TLRLVVPASQCGSLIGKGGSKIKEMR 126
Query: 311 QESGAAIKV 319
+ +GA ++V
Sbjct: 127 ESTGAQVQV 135
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 135 DGGHQV-TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D +Q T +L +P+D IGC+IG+ G + IR +GAQI+I + S+ +
Sbjct: 260 DASNQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-----AMEGSSERQIT 314
Query: 194 ISGEASVVKKALCQIASRLHD 214
I+G + + A I +R D
Sbjct: 315 ITGTPANISLAQYLINARFRD 335
>gi|410920039|ref|XP_003973491.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 327
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 146/323 (45%), Gaps = 74/323 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTT-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +++VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFSMII-DKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G A + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGTAHSIIECVKQICVVMLESPPK 172
Query: 219 SQHL----------------LASAISNSHS-----SSGSLVGPTAATPIVGIAPLMGPYG 257
+ A A+ H+ SS + + P + + +A GP+
Sbjct: 173 GVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDSSSAAISPQLSK-LHQLAMQQGPFP 231
Query: 258 ------GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
G+ G D S++ S + P IG +IG+ GA I++IRQ
Sbjct: 232 MATCNQGFTG---------------MDASAQACSHEMTIPNDLIGCIIGRQGAKISEIRQ 276
Query: 312 ESGAAIKVDSSSTEGDDCLITVS 334
SGA IK+ + D +T++
Sbjct: 277 MSGAQIKIANPVDGSTDRQVTIT 299
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + + P + ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERII 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS ++S V
Sbjct: 60 TLAGPTTAIFKAFSMIIDKLEED-------ISSSMTNSTATSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LR+V P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRIVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T R++VP S+ G LIGKGG I
Sbjct: 62 AGPTTAIFKAFSMIIDKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|426243970|ref|XP_004015811.1| PREDICTED: RNA-binding protein Nova-2 [Ovis aries]
Length = 255
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 16/212 (7%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 17 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 76
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 77 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 133
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P S
Sbjct: 134 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSC 190
Query: 222 L------LASAISNSHSSSGSLVGPTAATPIV 247
L +A ++NS+ + P P V
Sbjct: 191 LNISYANVAGPVANSNPTGSPYASPADVLPAV 222
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 13 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 72
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 73 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 130
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 131 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 182
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 53/228 (23%)
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
EL G +G + + K+L+PS G +IGKGGQ + ++ ETGA I++ K +
Sbjct: 3 ELPGSSAEEGEYFL--KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 60
Query: 187 RSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPI 246
LVQ G A + IA ++ + P Q + + N
Sbjct: 61 ERVCLVQ--GTAEALNAVHSFIAEKVREIP---QAMTKPEVVN----------------- 98
Query: 247 VGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAII 306
++ P D A +L+ P + G +IGKGGA +
Sbjct: 99 -----ILQPQTTMNPDRAKQ-------------------AKLIVPNSTAGLIIGKGGATV 134
Query: 307 NQIRQESGAAIKVDSSSTEG---DDCLITVSSK-EFFEDTLSATIEAV 350
+ ++SGA +++ S EG + ++TVS + E +SA ++ V
Sbjct: 135 KAVMEQSGAWVQL-SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKV 181
>gi|67969673|dbj|BAE01185.1| unnamed protein product [Macaca fascicularis]
Length = 324
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 140/303 (46%), Gaps = 51/303 (16%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSP 111
+++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 4 KEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------------- 47
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKGGQIVQN 164
A+FK +I ++L D S + VT +L+VP+ Q G +IGKGG ++
Sbjct: 48 ---AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKE 103
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLA 224
IR TGAQ+++ D LP+ R+ + I+G + + + QI + + S+S
Sbjct: 104 IRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLETLSQSPPKGV 159
Query: 225 SAISNSHSSSGSLV--GPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA--PRD--- 277
+ SS ++ G A T + G Y + D ++ + P
Sbjct: 160 TIPYRPKPSSSPVIFAGGQAYT-------IQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 212
Query: 278 ------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ + D +
Sbjct: 213 TGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQV 272
Query: 332 TVS 334
T++
Sbjct: 273 TIT 275
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 74/179 (41%), Gaps = 49/179 (27%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY----------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 82 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVK 141
Query: 94 ------------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRVI 124
S F G + Q A L K+H +
Sbjct: 142 QICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAM 201
Query: 125 AEEL-------RGDEDSDGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
+ G D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 202 QQSHFPMTHGNTGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 260
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 22/121 (18%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ 354
+G +IGK G + ++R+ESGA I + +EG+ C + TL+ A+ +
Sbjct: 6 VGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITLAGPTNAIFKAF 53
Query: 355 PRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIR 404
+K+E D S + + T RL+VP S+ G LIGKGG I E+R T A ++
Sbjct: 54 AMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 113
Query: 405 I 405
+
Sbjct: 114 V 114
>gi|115497150|ref|NP_001068751.1| poly(rC)-binding protein 4 [Bos taurus]
gi|119390858|sp|Q0VCU0.1|PCBP4_BOVIN RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|111304931|gb|AAI20010.1| Poly(rC) binding protein 4 [Bos taurus]
gi|296474781|tpg|DAA16896.1| TPA: poly(rC)-binding protein 4 [Bos taurus]
Length = 403
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 139/302 (46%), Gaps = 43/302 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVFH 74
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 75 AVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH--- 221
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 127 IRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIPY 182
Query: 222 ---------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLY 272
LL++ S V P T + ++ P+ S
Sbjct: 183 HPSLSLGTVLLSTNQGFSVQGQYGTVTPAEVTKLQQLSGHAVPFA------------SPS 230
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P D S++ S + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T
Sbjct: 231 MVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVT 290
Query: 333 VS 334
++
Sbjct: 291 IT 292
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRI 405
T A +++
Sbjct: 131 TGAQVQV 137
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 60/189 (31%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L +A +N
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN--------------------- 93
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
G+ SR +LRLV P + G +IGK G I +IR
Sbjct: 94 -------------GGNVSR------------PPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QESGAAIKV 319
+ +GA ++V
Sbjct: 129 ETTGAQVQV 137
>gi|386771593|ref|NP_730700.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|442634089|ref|NP_001262197.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
gi|383292066|gb|AAN12194.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|440216174|gb|AGB94890.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
Length = 359
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 131/297 (44%), Gaps = 56/297 (18%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIV + R ++ +KI I + GS ER+VTV S TNA ++
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISD---GSCPERIVTV---SGTTNAIFSAFTLIT 86
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
EE D G Q+ +L+VP+ Q G +IGK G ++ IR TG
Sbjct: 87 KK------------FEEFN-DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 133
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL-------- 222
I++ E LP+ R+ V +SG A + + + QI + ++P R +
Sbjct: 134 CSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQV 189
Query: 223 ---LASAISNSHSSSGSLVGPT---AATP----IVGIAPLMGP--YGGYK----GDTAGD 266
+ A + + G+ PT A P M P GG AG
Sbjct: 190 TGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTALAALAGS 249
Query: 267 WSRSLYSAPRDDLSSKEFSLRLVCPVAN--IGGVIGKGGAIINQIRQESGAAIKVDS 321
R+ A R E + V+N IG +IGKGG I +IRQ SGA I++ +
Sbjct: 250 QLRTANPANRAQQQQHEMT------VSNDLIGCIIGKGGTKIAEIRQISGAMIRISN 300
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 17/161 (10%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S + ++TVS
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSC--PERIVTVSG----- 73
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFT---TRLLVPTSRIGCLIGKGGSIITEMRR 397
T +A A + + E D G + T RL+VP S+ G LIGK GS I E+R+
Sbjct: 74 -TTNAIFSAFTLITKKFEEF--NDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 130
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
T +I++ E LP + + V +SG + + Q+
Sbjct: 131 TTGCSIQVA-SEMLP---NSTERAVTLSGSAEQITQCIYQI 167
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
+LR ++ Q ++ V +D IGC+IGKGG + IR +GA IRI E
Sbjct: 250 QLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGG-- 307
Query: 187 RSDELVQISGEASVVKKALCQIASRL 212
+D + ISG V A I R+
Sbjct: 308 NTDRTITISGNPDSVALAQYLINMRI 333
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ V IGC+IGKGG+ I E+R+++ A IRI E + D + ISG+ D
Sbjct: 267 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSV-- 322
Query: 434 ALIQVMTRLRANL 446
AL Q + +R ++
Sbjct: 323 ALAQYLINMRISM 335
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV R E+GA+I I D P + +V +SG +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTN 76
Query: 200 VVKKALCQIASRLHD 214
+ A I + +
Sbjct: 77 AIFSAFTLITKKFEE 91
>gi|347300276|ref|NP_001231441.1| poly(rC) binding protein 2 [Sus scrofa]
gi|417399505|gb|JAA46755.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 353
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 140/331 (42%), Gaps = 63/331 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 175
Query: 212 ------LHDNPSRSQHLLAS----------AISNSHSSSGSLVGPTAATPIVGIAPLMGP 255
PS S + A + S H++ + P P + + G
Sbjct: 176 KGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ 235
Query: 256 YGGYKGDTAGDWSRSLYSA--PRD----------DLSSKEFSLRLVCPVANIGGVIGKGG 303
Y + D ++ + P D S++ S L P IG +IG+ G
Sbjct: 236 YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQG 295
Query: 304 AIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
A IN+IRQ SGA IK+ + D +T++
Sbjct: 296 AKINEIRQMSGAQIKIANPVEGSTDRQVTIT 326
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I +D V
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVT 324
Query: 194 ISGEASVVKKALCQIASRL 212
I+G A+ + A I RL
Sbjct: 325 ITGSAASISLAQYLINVRL 343
>gi|327263852|ref|XP_003216731.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Anolis
carolinensis]
Length = 360
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 150/343 (43%), Gaps = 80/343 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGP-------YGGY-- 259
S + A SSGS P A + + L GP G Y
Sbjct: 173 GVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAI 232
Query: 260 ---------------------KGDTAGDWSRSLYSAPRD-------DLSSKEFSLRLVCP 291
G+T +S S+P + D S++ S L P
Sbjct: 233 PQPDLTKLHQLAMQQSHFPMSHGNTG--FSGVESSSPDEKGYWAGLDASAQTTSHELTIP 290
Query: 292 VANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
IG +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 291 NDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 333
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS +SS V
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNSTASSRPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LRLV P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I +D V
Sbjct: 277 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVT 331
Query: 194 ISGEASVVKKALCQIASRL 212
I+G A+ + A I RL
Sbjct: 332 ITGSAASISLAQYLINVRL 350
>gi|194762728|ref|XP_001963486.1| GF20264 [Drosophila ananassae]
gi|190629145|gb|EDV44562.1| GF20264 [Drosophila ananassae]
Length = 590
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 199/454 (43%), Gaps = 82/454 (18%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 61 NQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 120
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y + TNA + I E ++ + S
Sbjct: 121 HRKENV-GSVEKSITIYGNPENCTNAC-------------------KRILEVMQQEALST 160
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 161 NKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVK 218
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-- 253
G L +N SR+++ +++ + S+ + + P + G+ P+
Sbjct: 219 G---------------LIENMSRAENQISTKLRQSYENDLQAMAPQSLM-FPGLHPMAMM 262
Query: 254 -GPYGGYKGDTAGDW----SRSLYSAPR--------DDLSSKEFSLRLVCPVANIGGVIG 300
P G +T+ + S ++ P +DL F L P +G +IG
Sbjct: 263 STPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTF---LYIPNNAVGAIIG 319
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
G+ I I + S A++K+ + + D L + ++ T+ T E + Q EK
Sbjct: 320 TKGSHIRSIMRFSNASLKI--APLDADKPLDQQTERKV---TIVGTPEGQWKAQYMIFEK 374
Query: 361 IERDSGL------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ R+ G + T LLV +S++G +IGKGG + E++R+T + I+ LP+ L
Sbjct: 375 M-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPP 432
Query: 415 ASEDDEM-VQISGDLDLAKDALIQVMTRLRANLF 447
+ D+E V I G + A R+RA +
Sbjct: 433 SGGDEETPVHIIGPFYSVQSA----QRRIRAMML 462
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T + Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 302 QETTFLYI-PNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 360
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E G +D ++T +LLV S Q+G +
Sbjct: 361 PEGQ-------------WKAQYMIFEKMREEGFMCGTDDV----RLTVELLVASSQVGRI 403
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLH 213
IGKGGQ V+ ++ TG+ I++ + P + V I G V+ A +I A L
Sbjct: 404 IGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSAQRRIRAMMLS 463
Query: 214 DNP 216
NP
Sbjct: 464 TNP 466
>gi|335299138|ref|XP_003358505.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Sus scrofa]
Length = 403
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 144/303 (47%), Gaps = 45/303 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVFH 74
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 75 AVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLA 224
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P + A
Sbjct: 127 IRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKG----A 178
Query: 225 SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGG-----------YKGDTAGDWSRSLYS 273
+ + S G+++ T G + + G YG G S S+
Sbjct: 179 TIPYHPSLSLGTVLLSTNQ----GFS-VQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVP 233
Query: 274 A--PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +
Sbjct: 234 GLDPGTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHV 289
Query: 332 TVS 334
T++
Sbjct: 290 TIT 292
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRI 405
T A +++
Sbjct: 131 TGAQVQV 137
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 126/295 (42%), Gaps = 46/295 (15%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHD----------NPSRSQHLLASAISNSHSSSGSLVGP 240
+ I+G + V A+ IA +L + N SR L I S GSL+G
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQC--GSLIG- 118
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWS-RSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
A T I I G GD + + R++ + D + +R +C
Sbjct: 119 KAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPD--AIILCVRQIC--------- 167
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ----- 354
A+I + GA I S + G L T + T V +LQ
Sbjct: 168 ----AVILE-SPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGAVTPAEVTKLQQLSGH 222
Query: 355 --PRCSEKIER--DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
P S + D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 223 AVPFASPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>gi|149641305|ref|XP_001512362.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 1 [Ornithorhynchus anatinus]
Length = 584
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 182/403 (45%), Gaps = 67/403 (16%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI I + G+ E+ +T++S + +
Sbjct: 196 DVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCS 255
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
++I E ++ + +D+ ++ K+L ++ +G +IGK G
Sbjct: 256 ------------------TACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEG 297
Query: 160 QIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HD 214
+ ++ I +T +I I L+D L + + + G KA +I ++ ++
Sbjct: 298 RNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGSIETCAKAEEEIMKKIRESYE 353
Query: 215 NPSRSQHLLASAISNSHSSSGSLVGPTAATP---IVGIAPLMGPYGGYKGDTAGDWSRSL 271
N + +L A I + ++ L P+++ VG+A + +
Sbjct: 354 NDIAAMNLQAHLIPGLNLNALGLFPPSSSGIPPPTVGVAS----------------AAAA 397
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
S P + ++ L P +G +IGK G I Q+ + +GA+IK+ + EG D +
Sbjct: 398 TSYPPFGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKL 455
Query: 332 TVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIG 386
V ++ EA + Q R K++ ++ + + VP+ G +IG
Sbjct: 456 RVV-------IITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIG 508
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
KGG + E++ LT A + ++P++ P E+D+ +V+I+G
Sbjct: 509 KGGKTVNELQNLTSAEV-VVPRDQTP---DENDQVVVKITGHF 547
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 35/178 (19%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P +G+IIG+ G+ +KQL + I+I P ++ RVV + +
Sbjct: 407 PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRVVIITGPPE- 465
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIA----EELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
A FK R+ E G ++ ++ A + VPS G V
Sbjct: 466 ----------------AQFKAQGRIYGKLKEENFFGPKEEV---KLEAHIKVPSYAAGRV 506
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKALCQIASR 211
IGKGG+ V +++ T A++ + +D+ +D+ +V+I+G CQ+A R
Sbjct: 507 IGKGGKTVNELQNLTSAEVVVPRDQ----TPDENDQVVVKITGHFYA-----CQLAQR 555
>gi|55742577|ref|NP_998282.1| poly(rC)-binding protein 4 [Danio rerio]
gi|33604078|gb|AAH56323.1| Zgc:65870 [Danio rerio]
gi|41946775|gb|AAH65955.1| Zgc:65870 [Danio rerio]
Length = 442
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 146/325 (44%), Gaps = 60/325 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R ++ ++I I E GS ER++T+ A++ F
Sbjct: 8 RLLMHGKEVGSIIGKKGETVKRIREESSARINISE---GSCPERIITITGATE--CVFRA 62
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
K+ + + A G S VT +L++P+ Q G +IGKGG ++
Sbjct: 63 FTMIT-------IKLEEDLAALVANGTVTSK--PPVTLRLVIPASQCGSLIGKGGSKIKE 113
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLL- 223
IR +TGAQ+++ D LP+ R V ISG + + + I + + ++P + +
Sbjct: 114 IREKTGAQVQVAGD-LLPNSTERG---VTISGSQDAIIQCVKLICTVILESPPKGATIPY 169
Query: 224 -ASAISNSHSSSGSLVGPT---AATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
S + +G+ V T A+ P+ +A GG A ++ Y P +L
Sbjct: 170 RPSPAPGAVLLAGNQVFETSEFASHPLFSVA-----QGGLDLQQAYTV-QNQYGIPHSEL 223
Query: 280 ------------------------------SSKEFSLRLVCPVANIGGVIGKGGAIINQI 309
SS+ S L+ P IG +IG+ G IN+I
Sbjct: 224 AKLHQLSMQQGLGPIAQATATQVLPAGIESSSQTASQELLIPNDLIGSIIGRQGTKINEI 283
Query: 310 RQESGAAIKVDSSSTEGDDCLITVS 334
RQ SGA IK+ S D +T++
Sbjct: 284 RQVSGAQIKIGSQLDSTSDRHVTIT 308
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 30/164 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
+LRL+ +G +IGK G + +IR+ES A I + S + +IT++
Sbjct: 5 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISEGSC--PERIITIT--------- 53
Query: 344 SATIEAVVRLQPRCSEKIERD-SGLIS---------FTTRLLVPTSRIGCLIGKGGSIIT 393
E V R + K+E D + L++ T RL++P S+ G LIGKGGS I
Sbjct: 54 -GATECVFRAFTMITIKLEEDLAALVANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIK 112
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQ 437
E+R T A +++ + LP + + V ISG ++DA+IQ
Sbjct: 113 EIREKTGAQVQVA-GDLLP---NSTERGVTISG----SQDAIIQ 148
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+ A+I I + SC R ++ I+G
Sbjct: 5 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISEG----SCPER---IITITGATE 57
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
V +A I +L ++ LA+ ++N G + P V
Sbjct: 58 CVFRAFTMITIKLEED-------LAALVAN---------GTVTSKPPV------------ 89
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+LRLV P + G +IGKGG+ I +IR+++GA ++V
Sbjct: 90 -------------------------TLRLVIPASQCGSLIGKGGSKIKEIREKTGAQVQV 124
>gi|26346528|dbj|BAC36915.1| unnamed protein product [Mus musculus]
Length = 403
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 143/312 (45%), Gaps = 46/312 (14%)
Query: 39 GPEDTV---YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYS 94
GPE ++ R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+
Sbjct: 11 GPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI-- 65
Query: 95 ASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ T A ++ FK+ + + A G S VT +L++P+ Q G +
Sbjct: 66 -TGSTAAVFHAVSMIA------FKLDEDLCAAPANGGSVSR--PPVTLRLVIPASQCGSL 116
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
IGK G ++ IR TGAQ+++ D LP+ R+ V +SG + + QI + +
Sbjct: 117 IGKAGTKIKEIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILG 172
Query: 215 NPSRSQH------------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD 262
+P + LL++ S V P T + ++ P+
Sbjct: 173 SPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA----- 227
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
S P D S++ S + P IG VIG+ G+ I++IRQ SGA IK+ +
Sbjct: 228 -------SPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ 280
Query: 323 STEGDDCLITVS 334
+ + +T++
Sbjct: 281 AEGAGERHVTIT 292
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRI 405
T A +++
Sbjct: 131 TGAQVQV 137
>gi|58259741|ref|XP_567283.1| cytoplasm protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134116752|ref|XP_773048.1| hypothetical protein CNBJ3240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255668|gb|EAL18401.1| hypothetical protein CNBJ3240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229333|gb|AAW45766.1| cytoplasm protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 357
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 143/337 (42%), Gaps = 66/337 (19%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
GP+ R L + IIGRGG V ++R + +++ + E++PG+ ER++ V D
Sbjct: 76 GPQQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSGPLD- 134
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
A F + R I +E G VT K ++P+ ++G VIGKG
Sbjct: 135 -------------AVAKAFGLIVRRINDEPFDVPSVPGSRAVTIKFIIPNSRMGSVIGKG 181
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ I+ +GA++ + LP R ++ +SG A V A+ I + L + R
Sbjct: 182 GSKIKEIQEASGARLN-ASEAMLPGSTER---VLSVSGVADAVHIAVYYIGTILLEYQDR 237
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
P+ AT G YK SR
Sbjct: 238 Y--------------------PSNAT------------GSYK----QSQSRGPPPNSNAP 261
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST--------EGDDCL 330
+ ++ P A +G +IG+GG+ IN+IR +S I+V T ++ L
Sbjct: 262 PPPGMQTQQIFIPNALVGAIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERL 321
Query: 331 ITVSSKEFFEDTLSATIEAVV-RLQPRCSEKIERDSG 366
+T++ + D ++A + + R++ ++ +E+++G
Sbjct: 322 VTITG---YPDNINAAVALLYSRVEAERAKLVEQNAG 355
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ D ++ S+R + + +IG+GGA +N+IR++S A + V S + ++ VS
Sbjct: 72 KPDPGPQQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSG 131
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
D ++ +VR + G + T + ++P SR+G +IGKGGS I E+
Sbjct: 132 P---LDAVAKAFGLIVRRINDEPFDVPSVPGSRAVTIKFIIPNSRMGSVIGKGGSKIKEI 188
Query: 396 RRLTKANI 403
+ + A +
Sbjct: 189 QEASGARL 196
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 21/185 (11%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSK--- 336
S+ +++ + P + +G VIGKGG+ I +I++ SGA + + G + +++VS
Sbjct: 160 SRAVTIKFIIPNSRMGSVIGKGGSKIKEIQEASGARLNASEAMLPGSTERVLSVSGVADA 219
Query: 337 -------------EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTR-LLVPTSRIG 382
E+ + S + + Q R T+ + +P + +G
Sbjct: 220 VHIAVYYIGTILLEYQDRYPSNATGSYKQSQSRGPPPNSNAPPPPGMQTQQIFIPNALVG 279
Query: 383 CLIGKGGSIITEMRRLTKANIRIL-PKENLP--KIASEDDEMVQISGDLDLAKDALIQVM 439
+IG+GGS I E+R + IR+ P +P A+ ++ +V I+G D A+ +
Sbjct: 280 AIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERLVTITGYPDNINAAVALLY 339
Query: 440 TRLRA 444
+R+ A
Sbjct: 340 SRVEA 344
>gi|402906002|ref|XP_003915796.1| PREDICTED: RNA-binding protein Nova-2 [Papio anubis]
Length = 618
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 162 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 221
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 222 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 278
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P S
Sbjct: 279 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSC 335
Query: 222 L------LASAISNSHSSSGSLVGPTAATP 245
L +A ++NS+ + P P
Sbjct: 336 LNISYANVAGPVANSNPTGSPYASPADVLP 365
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 89/179 (49%), Gaps = 19/179 (10%)
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITV 333
L E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+
Sbjct: 154 LEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG 213
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCL 384
+++ + + + I VR P+ K E + L TT +L+VP S G +
Sbjct: 214 TAEAL--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLI 271
Query: 385 IGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
IGKGG+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 272 IGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 327
>gi|209156062|gb|ACI34263.1| PolyrC-binding protein 2 [Salmo salar]
Length = 318
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 144/313 (46%), Gaps = 62/313 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTT-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I E+L D S + VT +++VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFSMII-EKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGTPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIA----PL-MGPYG-GYKG 261
S + A +++ G P T + +A P MGP G++G
Sbjct: 173 GVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPMGPNNPGFQG 232
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D S++ S + P IG +IG+ G+ IN+IRQ SGA IK+ +
Sbjct: 233 GM--------------DASAQTSSHEMTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIAN 278
Query: 322 SSTEGDDCLITVS 334
D +T++
Sbjct: 279 PVEGSADRQVTIT 291
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 51/214 (23%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSA-------- 95
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 100 LRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPQSIIECV 159
Query: 96 -----------------------SDETNAFEDGDKFVSPAQDA-----LFKVHDRVIAEE 127
S F G + Q A L K+H + +
Sbjct: 160 KQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQS 219
Query: 128 L----RGDEDSDGGHQVTAK-----LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD 178
+ GG +A+ + +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 220 PFPMGPNNPGFQGGMDASAQTSSHEMTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANP 279
Query: 179 EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+D V I+G A+ + A I +RL
Sbjct: 280 -----VEGSADRQVTITGSAASISLAEYLINARL 308
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS ++S V
Sbjct: 60 TLAGPTTAIFKAFSMIIEKLEED-------ISSSMTNSTATSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LR+V P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRIVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + EK+E D S + + T R++VP S+ G LIGKGG I
Sbjct: 62 AGPTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|223949173|gb|ACN28670.1| unknown [Zea mays]
gi|238010644|gb|ACR36357.1| unknown [Zea mays]
gi|413924015|gb|AFW63947.1| transcribed sequence 1087 protein [Zea mays]
Length = 344
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 147/343 (42%), Gaps = 41/343 (11%)
Query: 30 GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKI---RIGETVPGSE 86
GDD+++ T R+L G IIG+GG + + + ++I R E PG+
Sbjct: 34 GDDKEK------PTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSNEFFPGTN 87
Query: 87 ERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+R++ V DE A+ + ++++AE G+E ++ + +L+V
Sbjct: 88 DRIIMVSGLFDEV-------------MKAMELILEKLLAE---GEEFNEAEARPKVRLVV 131
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG----EASVVK 202
P+ G +IGKGG +++ E+ A I+I ++ + D LV I+G + + +
Sbjct: 132 PNSSCGGIIGKGGATIKSFIEESHAGIKISPQDN--NYVGLHDRLVTITGTFDNQMNAID 189
Query: 203 KALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD 262
L +++ +H P+ S + ++ S G VG A GP GY
Sbjct: 190 LILKKLSEDVHYPPNLSSPFPYAGLTFP-SYPGVPVGYMIPQVPYSNAVNYGPNNGY--- 245
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVA--NIGGVIGKGGAIINQIRQESGAAIKVD 320
G + + + P +S E L +A +IG V+G+ G I +I Q SGA IK+
Sbjct: 246 -GGRYQNNKPTTPMRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKI- 303
Query: 321 SSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIER 363
S GD T K T A A + R S ER
Sbjct: 304 --SDRGDYISGTSDRKVTITGTPEAIRTAESMIMQRVSASSER 344
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 10/168 (5%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS---TEGDDCLITVS 334
D K LR + G +IGKGG+ IN + +SGA I++ S+ +D +I VS
Sbjct: 35 DDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSNEFFPGTNDRIIMVS 94
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITE 394
F++ + A +E + L+ +E E + RL+VP S G +IGKGG+ I
Sbjct: 95 G--LFDEVMKA-MELI--LEKLLAEGEEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKS 149
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
+ A I+I P++N D +V I+G D +A+ ++ +L
Sbjct: 150 FIEESHAGIKISPQDN--NYVGLHDRLVTITGTFDNQMNAIDLILKKL 195
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILK-DEHLPSCALRSD 189
+E D + LV + GC+IGKGG + + +S++GA+I++ + +E P +D
Sbjct: 32 EEGDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSNEFFPGT---ND 88
Query: 190 ELVQISGEASVVKKALCQIASRL 212
++ +SG V KA+ I +L
Sbjct: 89 RIIMVSGLFDEVMKAMELILEKL 111
>gi|344266063|ref|XP_003405100.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Loxodonta
africana]
Length = 360
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 143/345 (41%), Gaps = 84/345 (24%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALC--------QIAS 210
G ++ IR TGAQ+++ D LP+ R+ + I K +C Q
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLEVSPQAPP 175
Query: 211 RLHDNPSRSQHLL---------ASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG---- 257
+L P R + + + + S H++ + P P + + G Y
Sbjct: 176 KLQCIPWRLKSSIYPQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQP 235
Query: 258 ----------------------GYKG------DTAGDWSRSLYSAPRDDLSSKEFSLRLV 289
G+ G + G W+ D S++ S L
Sbjct: 236 DLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGL-------DASAQTTSHELT 288
Query: 290 CPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
P IG +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 289 IPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 333
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I +D V
Sbjct: 277 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVT 331
Query: 194 ISGEASVVKKALCQIASRL 212
I+G A+ + A I RL
Sbjct: 332 ITGSAASISLAQYLINVRL 350
>gi|417399108|gb|JAA46584.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 333
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 135/299 (45%), Gaps = 48/299 (16%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA-SRLHDNPS 217
G ++ IR TGAQ+++ D LP+ R+ + I K +C + L +P
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 175
Query: 218 R----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIA------PLMGPYGGYK 260
+ S + A +++ G P T + +A P+ G+
Sbjct: 176 KGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFS 235
Query: 261 GDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
G + Y A D +S + + L P IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 236 GIESSSPEVKGYWASLD--ASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 292
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 90/229 (39%), Gaps = 67/229 (29%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY----------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 101 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVK 160
Query: 94 ------------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRVI 124
S F G + Q A L K+H +
Sbjct: 161 QICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAM 220
Query: 125 AE--------------------ELRGDEDS-DGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
+ E++G S D Q T +L +P++ IGC+IG+ G +
Sbjct: 221 QQSHFPMTHGNTGFSGIESSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANIN 280
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
IR +GAQI+I S V I+G A+ + A I +RL
Sbjct: 281 EIRQMSGAQIKIANP-----VEGSSGRQVTITGSAASISLAQYLINARL 324
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|297262518|ref|XP_001105618.2| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Macaca mulatta]
Length = 335
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 135/309 (43%), Gaps = 37/309 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ + TNA
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITL---AGPTNAIFKA 71
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ D L +V + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 72 FAMII---DKLEEVFSSSMTNSTAASRPP-----VTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR-------------L 212
R TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPY 182
Query: 213 HDNPSRSQHLLASAISNSHSSSGSLVGPTA-ATPIVGIA------PLMGPYGGYKGDTAG 265
PS S + A +++ G P T + +A P+ G+ G +
Sbjct: 183 RPKPSSSPVIFAGG--QAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESS 240
Query: 266 DWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE 325
Y A D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 241 SPEVKGYWAGLDA-SAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEG 299
Query: 326 GDDCLITVS 334
D +T++
Sbjct: 300 STDRQVTIT 308
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L + + +S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEE-------VFSSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 89/230 (38%), Gaps = 68/230 (29%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY----------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 101 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVK 160
Query: 94 ------------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRVI 124
S F G + Q A L K+H +
Sbjct: 161 QICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAM 220
Query: 125 AEE----------LRGDEDS-----------DGGHQVTA-KLLVPSDQIGCVIGKGGQIV 162
+ G E S D Q T+ +L +P+D IGC+IG+ G +
Sbjct: 221 QQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKI 280
Query: 163 QNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
IR +GAQI+I +D V I+G A+ + A I RL
Sbjct: 281 NEIRQMSGAQIKIANP-----VEGSTDRQVTITGSAASISLAQYLINVRL 325
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD--DCLITVSSKEFFED 341
++RL+ +G +IGK G + ++R+ESGA I + +EG+ + +IT++
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGNCPERIITLAGPT--NA 67
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGL--ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
A + +L+ S + + T RL+VP S+ G LIGKGG I E+R T
Sbjct: 68 IFKAFAMIIDKLEEVFSSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIREST 127
Query: 400 KANIRI 405
A +++
Sbjct: 128 GAQVQV 133
>gi|390474894|ref|XP_002758191.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Callithrix jacchus]
Length = 1052
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 185/412 (44%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 646 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 705
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 706 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 747
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 748 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACACAEIEIMKKLREAFEND 805
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 806 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPH 865
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 866 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 923
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 924 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 976
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 977 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 1024
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 878 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 936
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 937 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 981
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 982 GKTVNELQNLTSAEVIVPRDQ 1002
>gi|417398902|gb|JAA46484.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 320
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 134/293 (45%), Gaps = 49/293 (16%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA-SRLHDNPS 217
G ++ IR TGAQ+++ D LP+ R+ + I K +C + L +P
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 175
Query: 218 R----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIAPLMGPYGGYKGDTAGD 266
+ S + A +++ G P T + +A + G+T
Sbjct: 176 KGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTG-- 233
Query: 267 WSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+SA D +S + + L P IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 234 -----FSASLD--ASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 279
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 87/216 (40%), Gaps = 54/216 (25%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY----------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 101 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVK 160
Query: 94 ------------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRVI 124
S F G + Q A L K+H +
Sbjct: 161 QICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAM 220
Query: 125 AEE----LRGDE----DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
+ G+ D Q T +L +P++ IGC+IG+ G + IR +GAQI+I
Sbjct: 221 QQSHFPMTHGNTGFSASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA 280
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
S V I+G A+ + A I +RL
Sbjct: 281 NP-----VEGSSGRQVTITGSAASISLAQYLINARL 311
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + + P + ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERII 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|354490197|ref|XP_003507246.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cricetulus
griseus]
Length = 322
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 48/308 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA-SRLHDNPS 217
G ++ IR TGAQ+++ D LP+ R+ + I K +C + L +P
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 175
Query: 218 R----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIAPLMGPYGGYKGDTAGD 266
+ S + A +++ G P T + +A + G+T
Sbjct: 176 KGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTG-- 233
Query: 267 WSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
+S L D S++ S L P IG +IG+ GA IN+IRQ SGA IK +
Sbjct: 234 FSAGL------DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVEGS 287
Query: 327 DDCLITVS 334
D +T++
Sbjct: 288 TDRQVTIT 295
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 86/217 (39%), Gaps = 55/217 (25%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY----------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 101 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVK 160
Query: 94 ------------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRVI 124
S F G + Q A L K+H +
Sbjct: 161 QICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAM 220
Query: 125 AEE----LRGDEDSDGGHQVTAK-----LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
+ G+ G +A+ L +P+D IGC+IG+ G + IR +GAQI+
Sbjct: 221 QQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKT 280
Query: 176 LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+D V I+G A+ + A I RL
Sbjct: 281 ANP-----VEGSTDRQVTITGSAASISLAQYLINVRL 312
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|195439130|ref|XP_002067484.1| GK16164 [Drosophila willistoni]
gi|194163569|gb|EDW78470.1| GK16164 [Drosophila willistoni]
Length = 587
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 195/444 (43%), Gaps = 62/444 (13%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 61 NQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 120
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y + TNA + I E ++ + +S
Sbjct: 121 HRKENV-GSLEKSITIYGNPENCTNAC-------------------KRILEVMQQEANST 160
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 161 NKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVK 218
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA----- 250
G + +A QI+++L + ++ L + S G +TP G+
Sbjct: 219 GLIENMSRAENQISTKLRQS---YENDLQAMAPQSLMFPGLHPMAMMSTPGNGMVFNTSM 275
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
P G T + ++ +D+ + L P +G +IG G+ I I
Sbjct: 276 PFPSCQGFAMSKTPANVVPPVFP---NDMQETTY---LYIPNNAVGAIIGTKGSHIRSIM 329
Query: 311 QESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL--- 367
+ S A++K+ + + D L + ++ T+ T E + Q EK+ R+ G
Sbjct: 330 RFSNASLKI--APIDADKPLDQQTERKV---TIVGTPEGQWKAQYMIFEKM-REEGFMCG 383
Query: 368 ---ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEM-VQ 423
+ T LLV +S++G +IGKGG + E++R+T + I+ LP+ L + D+E V
Sbjct: 384 TDDVRLTIELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPPSGGDEETPVH 442
Query: 424 ISGDLDLAKDALIQVMTRLRANLF 447
I G + A R+RA +
Sbjct: 443 IIGPFYSVQSA----QRRIRAMML 462
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 25/210 (11%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 302 QETTYLYI-PNNAVGAIIGTKGSHIRSIMRFSNASLKIAPIDADKPLDQQTERKVTIVGT 360
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E G +D ++T +LLV S Q+G +
Sbjct: 361 PEGQ-------------WKAQYMIFEKMREEGFMCGTDDV----RLTIELLVASSQVGRI 403
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLH 213
IGKGGQ V+ ++ TG+ I++ + P + V I G V+ A +I A L
Sbjct: 404 IGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSAQRRIRAMMLS 463
Query: 214 DNPSRSQHLLASAISNSHSSSGSLVGPTAA 243
NP +A SL G AA
Sbjct: 464 TNPPPVTKKQKAAKEQQLQQQQSLAGAGAA 493
>gi|397521979|ref|XP_003846057.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 2 [Pan
paniscus]
Length = 465
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 141/346 (40%), Gaps = 85/346 (24%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLESPKGVTI 175
Query: 212 -LHDNPSRSQHLLAS----------AISNSHSSSGSLVGPTAATPIVGIAPLMGPYG--- 257
PS S + A + S H++ + P P + + G Y
Sbjct: 176 PYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQ 235
Query: 258 -----------------------GYKG------DTAGDWSRSLYSAPRDDLSSKEFSLRL 288
G+ G + G W+ D S++ S L
Sbjct: 236 PDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGL-------DASAQTTSHEL 288
Query: 289 VCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
P IG +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 289 TIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 334
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I +D V
Sbjct: 278 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVT 332
Query: 194 ISGEASVVKKALCQIASRLHDNPSRSQ 220
I+G A+ + A I L + SQ
Sbjct: 333 ITGSAASISLAQYLINVSLENAKPSSQ 359
>gi|195042483|ref|XP_001991440.1| GH12054 [Drosophila grimshawi]
gi|193901198|gb|EDW00065.1| GH12054 [Drosophila grimshawi]
Length = 611
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 199/454 (43%), Gaps = 82/454 (18%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 61 NQRRSIRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 120
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y D TNA + I E ++ + S
Sbjct: 121 HRKENV-GSLEKSITIYGNPDNCTNAC-------------------KRILEVMQQEALST 160
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 161 NKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSYNL--ERIITVK 218
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-- 253
G L +N SR+++ +++ + S+ + + P + G+ P+
Sbjct: 219 G---------------LIENMSRAENQISTKLRQSYENDLQAIAPQSLM-FPGLHPMAMM 262
Query: 254 -GPYGGYKGDTAGDW----SRSLYSAPR--------DDLSSKEFSLRLVCPVANIGGVIG 300
P G +T+ + S ++ P +D+ + L P +G +IG
Sbjct: 263 STPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPAFPNDMQETTY---LYIPNNAVGAIIG 319
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
G+ I I + S A++K+ + + D L + ++ T+ T E + Q EK
Sbjct: 320 TKGSHIRSIMRFSSASLKI--APLDADKPLDQQTERKV---TIVGTPEGQWKAQYMIFEK 374
Query: 361 IERDSGL------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ R+ G + T LLV +S++G +IGKGG + E++R+T + I+ LP+ L
Sbjct: 375 M-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPP 432
Query: 415 ASEDDEM-VQISGDLDLAKDALIQVMTRLRANLF 447
+ D+E V I G + A R+RA +
Sbjct: 433 SGGDEETPVHIIGQFYSVQSA----QRRIRAMML 462
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 25/183 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 302 QETTYLYI-PNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVGT 360
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E G +D ++T +LLV S Q+G +
Sbjct: 361 PEGQ-------------WKAQYMIFEKMREEGFMCGTDDV----RLTVELLVASSQVGRI 403
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLH 213
IGKGGQ V+ ++ TG+ I++ + P + V I G+ V+ A +I A L
Sbjct: 404 IGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGQFYSVQSAQRRIRAMMLS 463
Query: 214 DNP 216
NP
Sbjct: 464 TNP 466
>gi|410951299|ref|XP_003982335.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Felis catus]
Length = 403
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 139/298 (46%), Gaps = 35/298 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVFH 74
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 75 AVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS----- 219
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 127 IRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIPY 182
Query: 220 -QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA--PR 276
L + S + S+ G A + L G S S+ P
Sbjct: 183 HPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQ----QLSGHAVPFASPSMVPGLDPG 238
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
SS+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T++
Sbjct: 239 TQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 292
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRI 405
T A +++
Sbjct: 131 TGAQVQV 137
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 126/315 (40%), Gaps = 86/315 (27%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHD----------NPSRSQHLLASAISNSHSSSGSLVGP 240
+ I+G + V A+ IA +L + N SR L I S GSL+G
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQC--GSLIG- 118
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWSRS----------------------LYSAPRDD 278
A T I I G GD + + L S P+
Sbjct: 119 KAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGA 178
Query: 279 LSSKEFSLRL--VCPVANIG-GVIGKGGAI----INQIRQESGAAIKVDSSS-TEGDDCL 330
SL L V AN G V G+ GA+ + +++Q SG A+ S S G D
Sbjct: 179 TIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVPGLDPG 238
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGS 390
SS+EF LVP IGC+IG+ GS
Sbjct: 239 TQTSSQEF------------------------------------LVPNDLIGCVIGRQGS 262
Query: 391 IITEMRRLTKANIRI 405
I+E+R+++ A+I+I
Sbjct: 263 KISEIRQMSGAHIKI 277
>gi|344266065|ref|XP_003405101.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Loxodonta
africana]
Length = 293
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 138/297 (46%), Gaps = 55/297 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLE---- 168
Query: 219 SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD 277
+++ G P T + +A + G+T +S L
Sbjct: 169 -----------AYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTG--FSAGL------ 209
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 210 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 266
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 28/190 (14%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET---- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECV 159
Query: 100 --------NAFEDGDKFVSPAQDALFKVHDRVIAEE----LRGDEDSDGGHQVTAK---- 143
A+ ++ P D L K+H + + G+ G +A+
Sbjct: 160 KQICVVMLEAYTIQGQYAIPQPD-LTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSH 218
Query: 144 -LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
L +P+D IGC+IG+ G + IR +GAQI+I +D V I+G A+ +
Sbjct: 219 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVTITGSAASIS 273
Query: 203 KALCQIASRL 212
A I RL
Sbjct: 274 LAQYLINVRL 283
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 128/305 (41%), Gaps = 94/305 (30%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + + P + ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERII 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKVDS----SSTEGDDCL--ITVSSKEFFEDTLSATIEA-------------VVRL 353
+GA ++V +STE + I S E + +EA + +L
Sbjct: 127 TGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLEAYTIQGQYAIPQPDLTKL 186
Query: 354 QPRCSEKIE-------------RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
++ D+ + + L +P IGC+IG+ G+ I E+R+++
Sbjct: 187 HQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSG 246
Query: 401 ANIRI 405
A I+I
Sbjct: 247 AQIKI 251
>gi|354490712|ref|XP_003507500.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Cricetulus griseus]
Length = 731
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 191/422 (45%), Gaps = 67/422 (15%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 345 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKPITILSTPEG 404
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
+A + L +H +D+ +V K+L ++ +G +IGK
Sbjct: 405 ASAA---------CKSILEIMHKEA--------QDTKLTEEVPLKILAHNNFVGRLIGKE 447
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G +A +I ++ ++N
Sbjct: 448 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCARAEEEIMKKIRESYEN 505
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP---LMGPYGGYKGDTAGDWSRSLY 272
S +L A I + ++ L PT+ P P + PY
Sbjct: 506 DIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTMTPPY---------------- 549
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D +
Sbjct: 550 --PQFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVR 604
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGK 387
+ ++ EA + Q R KI+ ++ + + + VP+ G +IGK
Sbjct: 605 MV-------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGK 657
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLR 443
GG + E++ L+ A + ++P++ P E+++ +V+I+G +A+ + +++++++
Sbjct: 658 GGKTVNELQNLSSAEV-VVPRDQTP---DENNQVVVKITGHFYACQVAQRKIQEILSQVK 713
Query: 444 AN 445
+
Sbjct: 714 QH 715
>gi|432865686|ref|XP_004070563.1| PREDICTED: poly(rC)-binding protein 4-like [Oryzias latipes]
Length = 467
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 148/331 (44%), Gaps = 65/331 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R ++ +++ I E GS ER++T+ ++D + F
Sbjct: 30 RLLMHGKEVGSIIGKKGETVKRIREESSARVNISE---GSCPERIITITGSTD--SVFRA 84
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
+K+ + + A G S VT +L++P+ Q G +IGKGG ++
Sbjct: 85 FTMIT-------YKLEEDLTALVANGTISSK--PPVTLRLVIPASQCGSLIGKGGAKIKE 135
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISG-EASVVK--KALCQ-----------IAS 210
IR TGAQI++ D LP+ R V ISG + SV++ K +C I
Sbjct: 136 IRESTGAQIQVAGDL-LPNSTERG---VTISGNQDSVIQCVKLICTVILESPPKGATIPY 191
Query: 211 RLHDNPSR--------------SQHLL------------ASAISNSHSSSGSLVGPTAAT 244
R +P+ + H L A A+ N + S +
Sbjct: 192 RPTPSPAALLIAGNQVFEASDFAPHPLYSVTQGGLDLQQAYALQNQYGIPHSELAKLHQL 251
Query: 245 PIV-GIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGG 303
+ G++P+ P T L+ P S+ + S L+ P IG +IG+ G
Sbjct: 252 SVQQGLSPIAQP-----ASTIMPGKLLLHFLPSGMDSTSQTSQELLIPNDLIGSIIGRQG 306
Query: 304 AIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
IN+IRQ SGA IK+ S D +T++
Sbjct: 307 TKINEIRQVSGAQIKIGSQLDGTSDRHVTIT 337
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 30/164 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
+LRL+ +G +IGK G + +IR+ES A + + S + +IT++
Sbjct: 27 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEGSC--PERIITIT--------- 75
Query: 344 SATIEAVVRLQPRCSEKIERD------SGLIS----FTTRLLVPTSRIGCLIGKGGSIIT 393
+ ++V R + K+E D +G IS T RL++P S+ G LIGKGG+ I
Sbjct: 76 -GSTDSVFRAFTMITYKLEEDLTALVANGTISSKPPVTLRLVIPASQCGSLIGKGGAKIK 134
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQ 437
E+R T A I++ + LP + + V ISG+ +D++IQ
Sbjct: 135 EIRESTGAQIQVA-GDLLP---NSTERGVTISGN----QDSVIQ 170
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 84/203 (41%), Gaps = 62/203 (30%)
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F H + E+ GD G +T +LL+ ++G +IGK G+ V+ IR E+ A++ I
Sbjct: 6 FHSHITMNCEQDFGD--GGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNIS 63
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
+ SC R ++ I+G V +A I +L ++ L + ++N SS
Sbjct: 64 EG----SCPER---IITITGSTDSVFRAFTMITYKLEED-------LTALVANGTISSKP 109
Query: 237 LVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIG 296
V +LRLV P + G
Sbjct: 110 PV----------------------------------------------TLRLVIPASQCG 123
Query: 297 GVIGKGGAIINQIRQESGAAIKV 319
+IGKGGA I +IR+ +GA I+V
Sbjct: 124 SLIGKGGAKIKEIRESTGAQIQV 146
>gi|417399455|gb|JAA46731.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 351
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 135/317 (42%), Gaps = 66/317 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 175
Query: 212 ------LHDNPSRSQHLLAS----------AISNSHSSSGSLVGPTAATPIVGIAPLMGP 255
PS S + A + S H++ + P P + + G
Sbjct: 176 KGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ 235
Query: 256 YGGYKGDTAGDWSRSL-------------YSAPRDDLSSKEFSLRLVCPVANIGGVIGKG 302
Y + D ++ +SA D +S + + L P IG +IG+
Sbjct: 236 YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSASLD--ASTQTTHELTIPNNLIGCIIGRQ 293
Query: 303 GAIINQIRQESGAAIKV 319
GA IN+IRQ SGA IK+
Sbjct: 294 GANINEIRQMSGAQIKI 310
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
D Q T +L +P++ IGC+IG+ G + IR +GAQI+I S V I
Sbjct: 270 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANP-----VEGSSGRQVTI 324
Query: 195 SGEASVVKKALCQIASRL 212
+G A+ + A I +RL
Sbjct: 325 TGSAASISLAQYLINARL 342
>gi|405122865|gb|AFR97631.1| cytoplasmic protein [Cryptococcus neoformans var. grubii H99]
Length = 357
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 143/337 (42%), Gaps = 66/337 (19%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
GP+ R L + IIGRGG V ++R + +++ + E++PG+ ER++ V D
Sbjct: 76 GPQQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSGPLD- 134
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
A F + R I +E G VT K ++P+ ++G VIGKG
Sbjct: 135 -------------AVAKAFGLIVRRINDEPFDVPSVPGSRAVTIKFIIPNSRMGSVIGKG 181
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ I+ +GA++ + LP R ++ +SG A V A+ I + L + R
Sbjct: 182 GSKIKEIQEASGARLN-ASEAMLPGSTER---VLSVSGVADAVHIAVYYIGTILLEYQDR 237
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
P AT G YK SR +
Sbjct: 238 Y--------------------PANAT------------GSYK----QSQSRGPPANSNAP 261
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST--------EGDDCL 330
+ ++ P A +G +IG+GG+ IN+IR +S I+V T ++ L
Sbjct: 262 PPPGMQTQQIFIPNALVGAIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERL 321
Query: 331 ITVSSKEFFEDTLSATIEAVV-RLQPRCSEKIERDSG 366
+T++ + D ++A + + R++ ++ +E+++G
Sbjct: 322 VTITG---YPDNINAAVALLYSRVEAERAKLVEQNAG 355
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ D ++ S+R + + +IG+GGA +N+IR++S A + V S + ++ VS
Sbjct: 72 KPDPGPQQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSG 131
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
D ++ +VR + G + T + ++P SR+G +IGKGGS I E+
Sbjct: 132 P---LDAVAKAFGLIVRRINDEPFDVPSVPGSRAVTIKFIIPNSRMGSVIGKGGSKIKEI 188
Query: 396 RRLTKANI 403
+ + A +
Sbjct: 189 QEASGARL 196
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 87/185 (47%), Gaps = 21/185 (11%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKE-- 337
S+ +++ + P + +G VIGKGG+ I +I++ SGA + + G + +++VS
Sbjct: 160 SRAVTIKFIIPNSRMGSVIGKGGSKIKEIQEASGARLNASEAMLPGSTERVLSVSGVADA 219
Query: 338 -----FFEDTLSATIEAVVRLQPRCSEKIERDSGLISF----------TTRLLVPTSRIG 382
++ T+ + S K + G + T ++ +P + +G
Sbjct: 220 VHIAVYYIGTILLEYQDRYPANATGSYKQSQSRGPPANSNAPPPPGMQTQQIFIPNALVG 279
Query: 383 CLIGKGGSIITEMRRLTKANIRIL-PKENLP--KIASEDDEMVQISGDLDLAKDALIQVM 439
+IG+GGS I E+R + IR+ P +P A+ ++ +V I+G D A+ +
Sbjct: 280 AIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERLVTITGYPDNINAAVALLY 339
Query: 440 TRLRA 444
+R+ A
Sbjct: 340 SRVEA 344
>gi|45553235|ref|NP_996145.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|194876029|ref|XP_001973701.1| GG16232 [Drosophila erecta]
gi|195496648|ref|XP_002095782.1| GE22592 [Drosophila yakuba]
gi|16648354|gb|AAL25442.1| LD32520p [Drosophila melanogaster]
gi|45446078|gb|AAS65095.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|190655484|gb|EDV52727.1| GG16232 [Drosophila erecta]
gi|194181883|gb|EDW95494.1| GE22592 [Drosophila yakuba]
gi|220951950|gb|ACL88518.1| mub-PC [synthetic construct]
Length = 364
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 131/298 (43%), Gaps = 53/298 (17%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIV + R ++ +KI I + GS ER+VTV S TNA ++
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISD---GSCPERIVTV---SGTTNAIFSAFTLIT 86
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+ + D G Q+ +L+VP+ Q G +IGK G ++ IR TG
Sbjct: 87 KKFEEWCSQFN---------DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL-------- 222
I++ E LP+ R+ V +SG A + + + QI + ++P R +
Sbjct: 138 CSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQV 193
Query: 223 ---LASAISNSHSSSGSLVGPT---AATP----IVGIAPLMGP--YGGYK-----GDTAG 265
+ A + + G+ PT A P M P GG AG
Sbjct: 194 TGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAALAALAG 253
Query: 266 DWSRSLYSAPRDDLSSKEFSLRLVCPVAN--IGGVIGKGGAIINQIRQESGAAIKVDS 321
R+ A R E + V+N IG +IGKGG I +IRQ SGA I++ +
Sbjct: 254 SQLRTANPANRAQQQQHEMT------VSNDLIGCIIGKGGTKIAEIRQISGAMIRISN 305
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S ++ ++ F
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIF- 79
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFT---TRLLVPTSRIGCLIGKGGSIITEMRR 397
SA + + CS+ D G + T RL+VP S+ G LIGK GS I E+R+
Sbjct: 80 ---SAFTLITKKFEEWCSQF--NDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
T +I++ E LP + + V +SG + + Q+
Sbjct: 135 TTGCSIQVA-SEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
+LR ++ Q ++ V +D IGC+IGKGG + IR +GA IRI E
Sbjct: 255 QLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGG-- 312
Query: 187 RSDELVQISGEASVVKKALCQIASRL 212
+D + ISG V A I R+
Sbjct: 313 NTDRTITISGNPDSVALAQYLINMRI 338
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ V IGC+IGKGG+ I E+R+++ A IRI E + D + ISG+ D
Sbjct: 272 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSV-- 327
Query: 434 ALIQVMTRLRANL 446
AL Q + +R ++
Sbjct: 328 ALAQYLINMRISM 340
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV R E+GA+I I D P + +V +SG +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTN 76
Query: 200 VVKKALCQIASRLHD 214
+ A I + +
Sbjct: 77 AIFSAFTLITKKFEE 91
>gi|198469242|ref|XP_001354960.2| GA14212 [Drosophila pseudoobscura pseudoobscura]
gi|198146781|gb|EAL32016.2| GA14212 [Drosophila pseudoobscura pseudoobscura]
Length = 521
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 189/426 (44%), Gaps = 77/426 (18%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 61 NQRRSQRNQRNTYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 120
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y + TNA + I E ++ + S
Sbjct: 121 HRKENV-GSLEKSITIYGNPENCTNAC-------------------KRILEVMQQEALST 160
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 161 NKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVK 218
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-- 253
G L +N SR+++ +++ + S+ + + P + G+ P+
Sbjct: 219 G---------------LIENMSRAENQISTKLRQSYENDLQAMAPQSLM-FPGLHPMAMM 262
Query: 254 -GPYGGYKGDTAGDW----SRSLYSAPR--------DDLSSKEFSLRLVCPVANIGGVIG 300
P G +T+ + S ++ P +DL + L P +G +IG
Sbjct: 263 STPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTY---LYIPNNAVGAIIG 319
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
G+ I I + S A++K+ + + D L + ++ T+ T E + Q EK
Sbjct: 320 TKGSHIRSIMRFSNASLKI--APLDADKPLDQQTERKV---TIVGTPEGQWKAQYMIFEK 374
Query: 361 IERDSGL------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ R+ G + T LLV +S++G +IGKGG + E++R+T + I+ LP+ L
Sbjct: 375 M-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPP 432
Query: 415 ASEDDE 420
A D+E
Sbjct: 433 AGGDEE 438
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 302 QETTYLYI-PNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 360
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E G +D ++T +LLV S Q+G +
Sbjct: 361 PEG-------------QWKAQYMIFEKMREEGFMCGTDDV----RLTVELLVASSQVGRI 403
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
IGKGGQ V+ ++ TG+ I++ + P + V I G
Sbjct: 404 IGKGGQNVRELQRVTGSVIKLPEHALAPPAGGDEETPVHIIG 445
>gi|300798415|ref|NP_001178812.1| poly(rC)-binding protein 4 [Rattus norvegicus]
Length = 403
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 139/302 (46%), Gaps = 43/302 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVFH 74
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 75 AVSMIA------FKLDEDLCAAPANGGSVSR--PPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH--- 221
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 127 IRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIPY 182
Query: 222 ---------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLY 272
LL++ S V P T + ++ P+ S
Sbjct: 183 HPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA------------SPS 230
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P D S++ S + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T
Sbjct: 231 VVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVT 290
Query: 333 VS 334
++
Sbjct: 291 IT 292
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE--D 341
+LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R T A
Sbjct: 78 MIAFKLDEDLCAAPANGGSVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 402 NIRI 405
+++
Sbjct: 134 QVQV 137
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 60/189 (31%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L +A +N S
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPANGGS------------------ 96
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
+S +LRLV P + G +IGK G I +IR
Sbjct: 97 ----------------------------VSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QESGAAIKV 319
+ +GA ++V
Sbjct: 129 ETTGAQVQV 137
>gi|296477630|tpg|DAA19745.1| TPA: neuro-oncological ventral antigen 2-like [Bos taurus]
Length = 640
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 184 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 243
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 244 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 300
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P S
Sbjct: 301 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSC 357
Query: 222 L------LASAISNSHSSSGSLVGPTAATP 245
L +A ++NS+ + P P
Sbjct: 358 LNISYANVAGPVANSNPTGSPYASPADVLP 387
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 102/216 (47%), Gaps = 36/216 (16%)
Query: 259 YKGDTAGDWSR-----SLYSAP----------RDDLSSKE--FSLRLVCPVANIGGVIGK 301
+ G G WS+ LY P D++++E + L+++ P G +IGK
Sbjct: 139 FNGSEQGLWSQVGLKSQLYHFPGGTTQAVPDGYPDVANEEGEYFLKVLIPSYAAGSIIGK 198
Query: 302 GGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPR 356
GG I Q+++E+GA IK+ S T CL+ +++ + + + I VR P+
Sbjct: 199 GGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEAL--NAVHSFIAEKVREIPQ 256
Query: 357 CSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILP 407
K E + L TT +L+VP S G +IGKGG+ + + + A +++
Sbjct: 257 AMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQ 316
Query: 408 KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 317 K---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 349
>gi|432112571|gb|ELK35287.1| Poly(rC)-binding protein 2 [Myotis davidii]
Length = 453
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 139/327 (42%), Gaps = 59/327 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVT 175
Query: 212 --LHDNPSRSQHLLAS----------AISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
PS S + A + S H++ + P P + + G Y
Sbjct: 176 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP 235
Query: 260 KGDTAGDWSRSLYSA--PRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
+ D ++ + P D S++ S L P IG +IG+ GA IN
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKIN 295
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITVS 334
+I Q SGA IK+ + D +T++
Sbjct: 296 EIHQMSGAQIKIANPVEGSTDRQVTIT 322
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + I +GAQI+I +D V
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIHQMSGAQIKIANP-----VEGSTDRQVT 320
Query: 194 ISGEASVVKKALCQIASRLHDNPSRSQ 220
I+G A+ + A I L + SQ
Sbjct: 321 ITGSAASISLAQYLINVSLENAKPSSQ 347
>gi|148229563|ref|NP_001079932.1| insulin-like growth factor 2 mRNA-binding protein 3-B [Xenopus
laevis]
gi|82227771|sp|O57526.1|IF23B_XENLA RecName: Full=Insulin-like growth factor 2 mRNA-binding protein
3-B; Short=IGF2 mRNA-binding protein 3-B; Short=IMP-3-B;
AltName: Full=69 kDa RNA-binding protein B; AltName:
Full=B3.65 protein B; AltName: Full=IGF-II mRNA-binding
protein 3-B; AltName: Full=KH domain-containing
transcription factor B3-B; AltName: Full=RNA-binding
protein Vera-B; AltName: Full=Trans-acting factor B3-B;
AltName: Full=VICKZ family member 3-B; AltName:
Full=VLE-binding protein B; AltName: Full=Vg1
RNA-binding protein B; Short=Vg1 RBP-B; AltName:
Full=Vg1 localization element binding protein B;
AltName: Full=VgLE-binding and ER association protein B
gi|2801766|gb|AAB97457.1| KH domain-containing transcription factor B3 [Xenopus laevis]
gi|3172447|gb|AAC18597.1| Vg1 RNA binding protein variant A [Xenopus laevis]
gi|35505483|gb|AAH57700.1| MGC68429 protein [Xenopus laevis]
Length = 593
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 180/396 (45%), Gaps = 61/396 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNAFED 104
R L P + +G+IIG+ G ++ + T+SKI I + G+ E+ +T++S + +A
Sbjct: 208 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCSA--- 264
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++I E ++ + +D+ ++ K+L ++ +G +IGK G+ ++
Sbjct: 265 ---------------ACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLK 309
Query: 164 NIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPSR 218
I +T +I I L+D L + + + G KA ++ ++ ++N
Sbjct: 310 KIEQDTDTKITISPLQDLTL----YNPERTITVKGSIETCAKAEEEVMKKIRESYENDIA 365
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
+ +L A I + ++ L P+++ A + P + S P
Sbjct: 366 AMNLQAHLIPGLNLNALGLFPPSSSGMPPPSAGVSSP-------------TTSASYPPFG 412
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ ++ L P +G +IGK G I Q+ + +GA+IK+ + EG D + +
Sbjct: 413 QQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMV---- 466
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + + VP+ G +IGKGG +
Sbjct: 467 ---IITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVN 523
Query: 394 EMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
E++ LT A + ++P++ P E+D+ +V+I+G
Sbjct: 524 ELQNLTSAEV-VVPRDQTP---DENDQVVVKITGHF 555
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG-DDCLITVSSKEFFED 341
E LR++ P +G +IGK GA I I +++ + I + G + IT+ S +
Sbjct: 204 EVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHST---PE 260
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTT----RLLVPTSRIGCLIGKGGSIITEMRR 397
SA + ++ + +++++ FT ++L + +G LIGK G + ++ +
Sbjct: 261 GCSAACKIIMEI-------MQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 313
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
T I I P ++L + + + G ++ A +VM ++R
Sbjct: 314 DTDTKITISPLQDL--TLYNPERTITVKGSIETCAKAEEEVMKKIR 357
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 25/145 (17%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P +G+IIG+ G+ +KQL + I+I P ++ R+V + +
Sbjct: 415 PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPE- 473
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIA----EELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
A FK R+ E G ++ ++ A + VPS G V
Sbjct: 474 ----------------AQFKAQGRIYGKLKEENFFGPKEEV---KLEAHIKVPSYAAGRV 514
Query: 155 IGKGGQIVQNIRSETGAQIRILKDE 179
IGKGG+ V +++ T A++ + +D+
Sbjct: 515 IGKGGKTVNELQNLTSAEVVVPRDQ 539
>gi|62087230|dbj|BAD92062.1| poly(rC)-binding protein 2 isoform b variant [Homo sapiens]
Length = 373
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 144/339 (42%), Gaps = 71/339 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 29 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 78
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 79 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 128
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 129 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVT 187
Query: 212 --LHDNPSRSQHLLAS----------AISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
PS S + A + S H++ + P P + + G Y
Sbjct: 188 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP 247
Query: 260 KGD----------------TAGD--WSRSLYSAPRD------DLSSKEFSLRLVCPVANI 295
+ D T G+ +S S+P D S++ S L P I
Sbjct: 248 QPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLI 307
Query: 296 GGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
G +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 308 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 346
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 19 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 71
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 72 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 105
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 106 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 138
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 139 TGAQVQV 145
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 73
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 74 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 133
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 134 EIRESTGAQVQV 145
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 125 AEELRGDEDSDGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPS 183
+ E++G D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 280 SPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP----- 334
Query: 184 CALRSDELVQISGEASVVKKALCQIASRL 212
+D V I+G A+ + A I RL
Sbjct: 335 VEGSTDRQVTITGSAASISLAQYLINVRL 363
>gi|402225510|gb|EJU05571.1| hypothetical protein DACRYDRAFT_20011 [Dacryopinax sp. DJM-731 SS1]
Length = 413
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 121/281 (43%), Gaps = 40/281 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P++ R L + IIG+GG V ++R + ++I + E++PG+ ER++ V D
Sbjct: 119 PQNIHMRALIVTQDASIIIGKGGSHVNEIREKSGARITVSESIPGNPERILNVTGPLD-- 176
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
A F + R I +E G VT K ++P+ ++G +IGK G
Sbjct: 177 ------------AVAKAFGLIVRQINDEPFEQPSVPGSRAVTIKFIIPNSRMGTLIGKAG 224
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA-SRLHDNPSR 218
++ I+ +GA++ + LP R ++ +SG A + A + S L+ +PS
Sbjct: 225 SKIKEIQEASGAKLH-ASEGLLPGSTER---VLNVSGVADAIHIATYYVGNSLLNSHPS- 279
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
S++H+S P A+T Y +T A
Sbjct: 280 --------YSSTHASYKQQRRPMASTTY------------YPPNTPVSNYGYPGPAAAPA 319
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S + + P +G +IGKGGA IN+IR SG IK+
Sbjct: 320 PVSLQQTQNFYIPNDLVGSIIGKGGAKINEIRHVSGCQIKI 360
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETN--AF 102
+++ P ++G++IG+ G +K+++ + +K+ E +PGS ERV+ V +D + +
Sbjct: 208 KFIIPNSRMGTLIGKAGSKIKEIQEASGAKLHASEGLLPGSTERVLNVSGVADAIHIATY 267
Query: 103 EDGDKFVSP-----AQDALFKVHDRVIAEELRGDEDSDGGH---------------QVTA 142
G+ ++ + A +K R +A ++ + Q T
Sbjct: 268 YVGNSLLNSHPSYSSTHASYKQQRRPMASTTYYPPNTPVSNYGYPGPAAAPAPVSLQQTQ 327
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLP---SCALR----SDELVQIS 195
+P+D +G +IGKGG + IR +G QI+IL+ P S A++ ++ +V I+
Sbjct: 328 NFYIPNDLVGSIIGKGGAKINEIRHVSGCQIKILEPGQGPAPGSGAVQPMSETERMVTIT 387
Query: 196 GEASVVKKALCQIASRLHDNPSR 218
G + ++ A+ +ASR+ R
Sbjct: 388 GGIANIQMAVQLLASRIEQEKQR 410
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 7/109 (6%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IGKGG+ +N+IR++SGA I V S + ++ V+ D ++ +VR
Sbjct: 136 IIGKGGSHVNEIREKSGARITVSESIPGNPERILNVTGP---LDAVAKAFGLIVRQ--IN 190
Query: 358 SEKIERDS--GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIR 404
E E+ S G + T + ++P SR+G LIGK GS I E++ + A +
Sbjct: 191 DEPFEQPSVPGSRAVTIKFIIPNSRMGTLIGKAGSKIKEIQEASGAKLH 239
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 90/211 (42%), Gaps = 46/211 (21%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVS----- 334
S+ +++ + P + +G +IGK G+ I +I++ SGA + G + ++ VS
Sbjct: 202 SRAVTIKFIIPNSRMGTLIGKAGSKIKEIQEASGAKLHASEGLLPGSTERVLNVSGVADA 261
Query: 335 ---SKEFFEDTL------SATIEAVVRLQ--PRCSEKIERDSGLISF------------- 370
+ + ++L ++ A + Q P S + +S
Sbjct: 262 IHIATYYVGNSLLNSHPSYSSTHASYKQQRRPMASTTYYPPNTPVSNYGYPGPAAAPAPV 321
Query: 371 ----TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL-------PKENLPKIASEDD 419
T +P +G +IGKGG+ I E+R ++ I+IL P + SE +
Sbjct: 322 SLQQTQNFYIPNDLVGSIIGKGGAKINEIRHVSGCQIKILEPGQGPAPGSGAVQPMSETE 381
Query: 420 EMVQISGDLDLAKDALIQVMTRLRANLFDRE 450
MV I+G + A IQ+ +L A+ ++E
Sbjct: 382 RMVTITGGI-----ANIQMAVQLLASRIEQE 407
>gi|73985377|ref|XP_849987.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Canis lupus
familiaris]
gi|301767222|ref|XP_002919000.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Ailuropoda
melanoleuca]
Length = 403
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 139/298 (46%), Gaps = 35/298 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVFH 74
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 75 AVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS----- 219
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 127 IRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIPY 182
Query: 220 -QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA--PR 276
L + S + S+ G A + L G S S+ P
Sbjct: 183 HPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQ----QLSGHAVPFASPSMVPGLDPG 238
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
SS+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T++
Sbjct: 239 AQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 292
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRI 405
T A +++
Sbjct: 131 TGAQVQV 137
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 126/315 (40%), Gaps = 86/315 (27%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHD----------NPSRSQHLLASAISNSHSSSGSLVGP 240
+ I+G + V A+ IA +L + N SR L I S GSL+G
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQC--GSLIG- 118
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWSRS----------------------LYSAPRDD 278
A T I I G GD + + L S P+
Sbjct: 119 KAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGA 178
Query: 279 LSSKEFSLRL--VCPVANIG-GVIGKGGAI----INQIRQESGAAIKVDSSS-TEGDDCL 330
SL L V AN G V G+ GA+ + +++Q SG A+ S S G D
Sbjct: 179 TIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVPGLDPG 238
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGS 390
SS+EF LVP IGC+IG+ GS
Sbjct: 239 AQTSSQEF------------------------------------LVPNDLIGCVIGRQGS 262
Query: 391 IITEMRRLTKANIRI 405
I+E+R+++ A+I+I
Sbjct: 263 KISEIRQMSGAHIKI 277
>gi|495128|emb|CAA53546.1| mCBP [Mus musculus]
Length = 331
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 144/313 (46%), Gaps = 49/313 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIA------PLMGPYGGYKG 261
S + A +++ G P T + +A P+ G+ G
Sbjct: 173 GVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSG 232
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+ Y A D S++ S L P IG +I + GA IN+IRQ SGA IK+ +
Sbjct: 233 IESSSPEVKGYWAGLDA-SAQTTSHELTIPNDLIGCIIRRQGAKINEIRQMSGAQIKIAN 291
Query: 322 SSTEGDDCLITVS 334
D +T++
Sbjct: 292 PVEGSTDRQVTIT 304
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 88/226 (38%), Gaps = 64/226 (28%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY----------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 101 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVK 160
Query: 94 --------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRVIAEE- 127
S F G + Q A L K+H + +
Sbjct: 161 QICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSH 220
Query: 128 ---------LRGDEDS-----------DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIR 166
G E S D Q T+ +L +P+D IGC+I + G + IR
Sbjct: 221 FPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIRRQGAKINEIR 280
Query: 167 SETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+GAQI+I +D V I+G A+ + A I RL
Sbjct: 281 QMSGAQIKIANP-----VEGSTDRQVTITGSAASISLAQYLINVRL 321
>gi|148691147|gb|EDL23094.1| neuro-oncological ventral antigen 2 [Mus musculus]
Length = 411
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 7 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 66
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 67 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 123
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P S
Sbjct: 124 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSC 180
Query: 222 L------LASAISNSHSSSGSLVGPTAATP 245
L +A ++NS+ + P P
Sbjct: 181 LNISYANVAGPVANSNPTGSPYASPADVLP 210
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 3 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 62
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 63 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 120
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 121 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 172
>gi|348581993|ref|XP_003476761.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Cavia porcellus]
Length = 403
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 142/303 (46%), Gaps = 45/303 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVFH 74
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 75 AVSMIA------FKLDEDLCAAPANGGSVSR--PPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLA 224
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P + +
Sbjct: 127 IRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATI-- 180
Query: 225 SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGG-----------YKGDTAGDWSRSLYS 273
+ S SL G + G + + G YG G S S+
Sbjct: 181 -----PYHPSLSL-GTVLLSANQGFS-VQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVP 233
Query: 274 A--PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + I
Sbjct: 234 GLDPAAQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHI 289
Query: 332 TVS 334
T++
Sbjct: 290 TIT 292
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRI 405
T A +++
Sbjct: 131 TGAQVQV 137
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 60/189 (31%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L +A +N S
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPANGGS------------------ 96
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
+S +LRLV P + G +IGK G I +IR
Sbjct: 97 ----------------------------VSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QESGAAIKV 319
+ +GA ++V
Sbjct: 129 ETTGAQVQV 137
>gi|148226749|ref|NP_001081752.1| insulin-like growth factor 2 mRNA-binding protein 3-A [Xenopus
laevis]
gi|82227951|sp|O73932.1|IF23A_XENLA RecName: Full=Insulin-like growth factor 2 mRNA-binding protein
3-A; Short=IGF2 mRNA-binding protein 3-A; Short=IMP-3-A;
AltName: Full=69 kDa RNA-binding protein A; AltName:
Full=IGF-II mRNA-binding protein 3-A; AltName: Full=KH
domain-containing transcription factor B3-A; AltName:
Full=RNA-binding protein Vera-A; AltName:
Full=Trans-acting factor B3-A; AltName: Full=VICKZ
family member 3-A; AltName: Full=VLE-binding protein A;
AltName: Full=Vg1 RNA-binding protein A; Short=Vg1
RBP-A; AltName: Full=Vg1 localization element binding
protein A; AltName: Full=VgLE-binding and ER association
protein A
gi|3136158|gb|AAC41285.1| RNA binding protein Vera [Xenopus laevis]
gi|3172449|gb|AAC18598.1| Vg1 RNA binding protein variant D [Xenopus laevis]
gi|213623978|gb|AAI70477.1| Vg1 RNA binding protein Vera [Xenopus laevis]
gi|213623980|gb|AAI70479.1| Vg1 RNA binding protein Vera [Xenopus laevis]
gi|213625273|gb|AAI70224.1| Vg1 RNA binding protein Vera [Xenopus laevis]
gi|213626044|gb|AAI70196.1| Vg1 RNA binding protein Vera [Xenopus laevis]
Length = 594
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 175/396 (44%), Gaps = 61/396 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNAFED 104
R L P + +G+IIG+ G ++ + T+SKI I + G+ E+ +T++S + +A
Sbjct: 209 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCSA--- 265
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++I E ++ + +D+ ++ K+L ++ +G +IGK G+ ++
Sbjct: 266 ---------------ACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLK 310
Query: 164 NIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPSR 218
I +T +I I L+D L + + + G KA +I ++ ++N
Sbjct: 311 KIEQDTDTKITISPLQDLTL----YNPERTITVKGSIEPCAKAEEEIMKKIRESYENDIA 366
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
+ +L A I P +G+ P + S P
Sbjct: 367 AMNLQAHLI------------PGLNLNALGLFPSSSSGMPPPSVGVPSPTSSTSYPPFGQ 414
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
E ++ L P +G +IGK G I Q+ + +GA+IK+ + EG D + +
Sbjct: 415 QPESE-TVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMV---- 467
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP+ G +IGKGG +
Sbjct: 468 ---IITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIKVPSYAAGRVIGKGGKTVN 524
Query: 394 EMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
E++ LT A + ++P++ P E+DE +V+I+G
Sbjct: 525 ELQNLTSAEV-VVPRDQTP---DENDEVVVKITGHF 556
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG-DDCLITVSSKEFFED 341
E LR++ P +G +IGK GA I I +++ + I + G + IT+ S +
Sbjct: 205 EVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHST---PE 261
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTT----RLLVPTSRIGCLIGKGGSIITEMRR 397
SA + ++ + +++++ FT ++L + +G LIGK G + ++ +
Sbjct: 262 GCSAACKIIMEI-------MQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 314
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
T I I P ++L + + + G ++ A ++M ++R
Sbjct: 315 DTDTKITISPLQDL--TLYNPERTITVKGSIEPCAKAEEEIMKKIR 358
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 25/145 (17%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P +G+IIG+ G+ +KQL + I+I P ++ R+V
Sbjct: 416 PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMV-------- 467
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKL----LVPSDQIGCV 154
++ +A FK R+ + E++ G + KL VPS G V
Sbjct: 468 ---------IITGPPEAQFKAQGRIYG---KLKEENFFGPKEEVKLETHIKVPSYAAGRV 515
Query: 155 IGKGGQIVQNIRSETGAQIRILKDE 179
IGKGG+ V +++ T A++ + +D+
Sbjct: 516 IGKGGKTVNELQNLTSAEVVVPRDQ 540
>gi|145341361|ref|XP_001415781.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576004|gb|ABO94073.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 340
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 148/344 (43%), Gaps = 75/344 (21%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSASDETNAF 102
++L GS+IG+GG + + + T ++I++ E PG+ +RVV
Sbjct: 48 KFLISPSAAGSVIGKGGATINEFQALTGARIQLSRNREVFPGTNDRVV------------ 95
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIV 162
VS A+ +V +I + + E D Q L+VP+ GC+IGKGG +
Sbjct: 96 -----IVSGDLSAILQVLHLIITKLVADGEGIDRMGQPQVALVVPNSSCGCIIGKGGSKI 150
Query: 163 QNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS---- 217
++ ++ A I++ +D LP C +D + I+G V +A+ +A+ L ++P+
Sbjct: 151 RSFVEDSQADIKLSNQDRMLPGC---NDRTLTITGTIDCVLRAVALVATTLCEDPAYATL 207
Query: 218 ---RSQHLLASAIS-NSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
+S + + S +S ATP YG +G
Sbjct: 208 VHRQSTYSVQSPLSLQGGGGGRRSGEFNRATP--------RRYGAGQG------------ 247
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
RDD E S+ + P + IG V+G+GG I +++ SG IKV ++ DD
Sbjct: 248 GGRDD----ETSILVTIPDSLIGAVLGRGGRTIAEVQVASGCRIKV----SDRDD----- 294
Query: 334 SSKEFFEDT------LSATIEAVVRLQPRCSEKIERDSGLISFT 371
FFE T +S + E V ++K+ + +SF+
Sbjct: 295 ----FFEGTRNRKVVISGSAEGVQMANYLLTQKLSAITAQMSFS 334
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 33/204 (16%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
+AP DD S F+L+ + + G VIGKGGA IN+ + +GA I++ +
Sbjct: 37 AAPIDDGS---FTLKFLISPSAAGSVIGKGGATINEFQALTGARIQLSRN---------- 83
Query: 333 VSSKEFFEDT------LSATIEAVVRLQPRCSEKIERDSGLISFTTR----LLVPTSRIG 382
+E F T +S + A++++ K+ D I + L+VP S G
Sbjct: 84 ---REVFPGTNDRVVIVSGDLSAILQVLHLIITKLVADGEGIDRMGQPQVALVVPNSSCG 140
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
C+IGKGGS I ++A+I++ ++ + + +D + I+G +D A+ V T L
Sbjct: 141 CIIGKGGSKIRSFVEDSQADIKLSNQDRM--LPGCNDRTLTITGTIDCVLRAVALVATTL 198
Query: 443 -----RANLFDREGAVSTFVPVFL 461
A L R+ S P+ L
Sbjct: 199 CEDPAYATLVHRQSTYSVQSPLSL 222
>gi|397495989|ref|XP_003818826.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Pan paniscus]
gi|397495991|ref|XP_003818827.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pan paniscus]
Length = 403
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 139/302 (46%), Gaps = 43/302 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVFH 74
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 75 AVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH--- 221
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 127 IRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIPY 182
Query: 222 ---------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLY 272
LL++ S V P T + ++ P+ D
Sbjct: 183 HPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSMVPGLD------ 236
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T
Sbjct: 237 --PGTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVT 290
Query: 333 VS 334
++
Sbjct: 291 IT 292
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE--D 341
+LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R T A
Sbjct: 78 MIAFKLDEDLCAAPANGGNVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 402 NIRI 405
+++
Sbjct: 134 QVQV 137
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 129/298 (43%), Gaps = 52/298 (17%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHD----------NPSRSQHLLASAISNSHSSSGSLVGP 240
+ I+G + V A+ IA +L + N SR L I S GSL+G
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQC--GSLIG- 118
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWS-RSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
A T I I G GD + + R++ + D + +R +C
Sbjct: 119 KAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPD--AIILCVRQIC--------- 167
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE---DTLSATIEAVVRLQPR 356
A+I + GA I S + G + +S+ + F + T V +LQ
Sbjct: 168 ----AVILE-SPPKGATIPYHPSLSLGT---VLLSANQGFSVQGQYGAVTPAEVTKLQQL 219
Query: 357 CSEKIE---------RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
S + D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 220 SSHAVPFATPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>gi|332215035|ref|XP_003256642.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 5 [Nomascus leucogenys]
Length = 577
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 177/391 (45%), Gaps = 58/391 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 194 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 253
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 254 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 295
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 296 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 353
Query: 217 SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
+ + A+ I + S+ + G++ L P G A + Y P
Sbjct: 354 MLAVNQQANLIPGLNLSALGIFS-------TGLSVLSPPAGPRGAPPAAPYHPFAY--PE 404
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 405 QEI------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSER 452
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSI 391
++ EA + Q R K++ ++ + + VP+S G +IGKGG
Sbjct: 453 MVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKT 509
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+ E++ LT A + I+P++ P E++E++
Sbjct: 510 VNELQNLTSAEV-IVPRDQTP---DENEEVI 536
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 403 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 461
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 462 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 506
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 507 GKTVNELQNLTSAEVIVPRDQ 527
>gi|126345443|ref|XP_001362482.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Monodelphis
domestica]
gi|351706147|gb|EHB09066.1| Poly(rC)-binding protein 2 [Heterocephalus glaber]
gi|440900676|gb|ELR51755.1| Poly(rC)-binding protein 2, partial [Bos grunniens mutus]
Length = 351
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 144/340 (42%), Gaps = 72/340 (21%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVT 175
Query: 212 --LHDNPSRSQHLLAS----------AISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
PS S + A + S H++ + P P + + G Y
Sbjct: 176 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP 235
Query: 260 KGD----------------TAGD--WSRSLYSAPRD-------DLSSKEFSLRLVCPVAN 294
+ D T G+ +S S+P D S++ S L P
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDL 295
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
IG +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 296 IGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 335
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I +D V
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVT 333
Query: 194 ISGEASVVKKA 204
I+G A+ + A
Sbjct: 334 ITGSAASISLA 344
>gi|392344006|ref|XP_002728759.2| PREDICTED: RNA-binding protein Nova-2 [Rattus norvegicus]
Length = 576
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 23/233 (9%)
Query: 23 PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET- 81
P K T + ++ + + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 104 PEKLGVTHGEEGEYFL-------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSK 156
Query: 82 --VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGH 138
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 157 DFYPGTTERVCLVQGTAEALNA---AHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDR 213
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 214 AKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEP 270
Query: 199 SVVKKALCQIASRLHDNPSRSQHL------LASAISNSHSSSGSLVGPTAATP 245
V KA+ I ++ ++P S L +A ++NS+ + P P
Sbjct: 271 EQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLP 323
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 88/178 (49%), Gaps = 25/178 (14%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSK- 336
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 116 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 175
Query: 337 -----EFFEDTLSATIEAVVR------LQPRCSEKIERDSGLISFTTRLLVPTSRIGCLI 385
F + + +A+ + LQP+ + +R +L+VP S G +I
Sbjct: 176 LNAAHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 230
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
GKGG+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 231 GKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 285
>gi|327275209|ref|XP_003222366.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 461
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 37/183 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R ++ ++I I E GS ER+VT+ +D
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GSCPERIVTITGPTD------- 69
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---------VTAKLLVPSDQIGCVI 155
A+FK + L+ +ED + VT +L++P+ Q G +I
Sbjct: 70 ----------AIFKAFSMI---ALKFEEDINASMTNSTVTSKPPVTLRLVIPASQCGSLI 116
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG ++ IR TGAQ+++ D LP+ R+ V ISG + + + QI + ++
Sbjct: 117 GKGGSKIKEIRESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLES 172
Query: 216 PSR 218
P +
Sbjct: 173 PPK 175
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 32/170 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS--------TEGDDCLITVSS 335
++RL+ +G +IGK G + ++R+ESGA I + S T D + S
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFKAFS 76
Query: 336 K---EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+F ED ++ + V +P T RL++P S+ G LIGKGGS I
Sbjct: 77 MIALKFEEDINASMTNSTVTSKP-------------PVTLRLVIPASQCGSLIGKGGSKI 123
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
E+R T A +++ + LP + + V ISG DA+IQ + ++
Sbjct: 124 KEIRESTGAQVQVA-GDMLP---NSTERAVTISGT----PDAIIQCVKQI 165
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
++GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + SC R +
Sbjct: 9 TEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----SCPER---I 61
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + ++++NS +S V
Sbjct: 62 VTITGPTDAIFKAFSMIALKFEED-------INASMTNSTVTSKPPV------------- 101
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 102 ---------------------------------TLRLVIPASQCGSLIGKGGSKIKEIRE 128
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 129 STGAQVQV 136
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
+L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 286 ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKI 318
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
P D S+ S L P IG +IG+ G+ IN+IRQ SGA IK+ +++TEG
Sbjct: 274 PGLDASTPASSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKI-ANATEGS 325
>gi|242063550|ref|XP_002453064.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
gi|241932895|gb|EES06040.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
Length = 343
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 148/343 (43%), Gaps = 41/343 (11%)
Query: 30 GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSE 86
GDD+++ T R+L G IIG+GG + + + ++I++ E PG+
Sbjct: 33 GDDKEK------PTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTN 86
Query: 87 ERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+R++ V DE A+ + ++++AE G+E ++ + +L+V
Sbjct: 87 DRIIMVSGLFDEV-------------MKAMELILEKLLAE---GEEFNEAEARPKVRLVV 130
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG----EASVVK 202
P+ G +IGKGG +++ E+ A I+I ++ + D LV ++G + + +
Sbjct: 131 PNSSCGGIIGKGGATIKSFIEESHAGIKISPQDN--NYVGLHDRLVTVTGTFDNQMNAID 188
Query: 203 KALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD 262
L +++ +H P+ S + ++ + G VG A GP GY
Sbjct: 189 LILKKLSEDVHYPPNLSSPFPYAGLTFPN-YPGVPVGYMIPQVPYNNAVNYGPNNGY--- 244
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVA--NIGGVIGKGGAIINQIRQESGAAIKVD 320
G + + S P +S E L +A +IG V+G+ G I +I Q SGA IK+
Sbjct: 245 -GGRYQNNKPSTPMRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKI- 302
Query: 321 SSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIER 363
S GD T K T A A + R S ER
Sbjct: 303 --SDRGDFISGTSDRKVTITGTSEAIRTAESMIMQRVSASSER 343
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 10/168 (5%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS---TEGDDCLITVS 334
D K LR + G +IGKGG+ IN + +SGA I++ S +D +I VS
Sbjct: 34 DDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVS 93
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITE 394
F++ + A +E + L+ +E E + RL+VP S G +IGKGG+ I
Sbjct: 94 G--LFDEVMKA-MELI--LEKLLAEGEEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKS 148
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
+ A I+I P++N D +V ++G D +A+ ++ +L
Sbjct: 149 FIEESHAGIKISPQDN--NYVGLHDRLVTVTGTFDNQMNAIDLILKKL 194
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSD 189
+E D + LV + GC+IGKGG + + +S++GA+I++ + E P +D
Sbjct: 31 EEGDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGT---ND 87
Query: 190 ELVQISGEASVVKKALCQIASRL 212
++ +SG V KA+ I +L
Sbjct: 88 RIIMVSGLFDEVMKAMELILEKL 110
>gi|441656325|ref|XP_004093124.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2
[Nomascus leucogenys]
Length = 500
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 70 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 129
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 130 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 186
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P S
Sbjct: 187 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSC 243
Query: 222 L------LASAISNSHSSSGSLVGPTAATP 245
L +A ++NS+ + P P
Sbjct: 244 LNISYANVAGPVANSNPTGSPYASPADVLP 273
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 94/189 (49%), Gaps = 20/189 (10%)
Query: 269 RSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS----- 323
S Y+ P + L E+ L+++ P G +IGKGG I Q+++E+GA IK+ S
Sbjct: 53 HSYYNTP-NLLEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPG 111
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RL 374
T CL+ +++ + + + I VR P+ K E + L TT +L
Sbjct: 112 TTERVCLVQGTAEAL--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKL 169
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
+VP S G +IGKGG+ + + + A +++ K P+ + + +V +SG+ + A
Sbjct: 170 IVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKA 226
Query: 435 LIQVMTRLR 443
+ ++ +++
Sbjct: 227 VSAIVQKVQ 235
>gi|4235140|gb|AAD13116.1| RNA-binding protein Nova-2 [AA 29-492] [Homo sapiens]
Length = 464
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 8 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 67
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 68 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 124
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P S
Sbjct: 125 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSC 181
Query: 222 L------LASAISNSHSSSGSLVGPTAATP 245
L +A ++NS+ + P P
Sbjct: 182 LNISYANVAGPVANSNPTGSPYASPADVLP 211
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 4 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 63
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 64 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 121
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 122 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 173
>gi|363747261|ref|XP_003643959.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Gallus
gallus]
Length = 348
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 149/342 (43%), Gaps = 79/342 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGP-------YGGY-- 259
S + A SSGS P A + + L GP G Y
Sbjct: 173 GVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAI 232
Query: 260 ---------------------KGDTAGDWSRSLYSAPRD------DLSSKEFSLRLVCPV 292
G+T +S S+P D S++ S L P
Sbjct: 233 PQPDLTKLHQLAMQQSHFPMSHGNTG--FSGIESSSPEVKGYWGLDASAQTTSHELTIPN 290
Query: 293 ANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
IG +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 291 DLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 332
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 127 ELRGDEDSDGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
E++G D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 268 EVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VE 322
Query: 186 LRSDELVQISGEASVVKKA 204
+D V I+G A+ + A
Sbjct: 323 GSTDRQVTITGSAASISLA 341
>gi|149728835|ref|XP_001494599.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Equus
caballus]
Length = 403
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 142/303 (46%), Gaps = 45/303 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVFH 74
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 75 AVSMIA------FKLDEDLCAAPTNGGSVSR--PPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLA 224
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P + +
Sbjct: 127 IRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATI-- 180
Query: 225 SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGG-----------YKGDTAGDWSRSLYS 273
+ S SL G + G + + G YG G S S+
Sbjct: 181 -----PYHPSLSL-GTVLLSANQGFS-VQGQYGAVTSAEVTKLQQLSGHAVPFASPSMVP 233
Query: 274 A--PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +
Sbjct: 234 GLDPGAQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHV 289
Query: 332 TVS 334
T++
Sbjct: 290 TIT 292
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPTNGGSVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRI 405
T A +++
Sbjct: 131 TGAQVQV 137
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 60/189 (31%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L +A +N S
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPTNGGS------------------ 96
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
+S +LRLV P + G +IGK G I +IR
Sbjct: 97 ----------------------------VSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QESGAAIKV 319
+ +GA ++V
Sbjct: 129 ETTGAQVQV 137
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 364 DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 236 DPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>gi|395832731|ref|XP_003789409.1| PREDICTED: poly(rC)-binding protein 4 [Otolemur garnettii]
Length = 403
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 139/298 (46%), Gaps = 35/298 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVFH 74
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 75 AVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS----- 219
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 127 IRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIPY 182
Query: 220 -QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA--PR 276
L + S + S+ G A + L G S S+ P
Sbjct: 183 HPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQ----QLSGHAVPFASPSVVPGLDPG 238
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
SS+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T++
Sbjct: 239 TQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 292
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRI 405
T A +++
Sbjct: 131 TGAQVQV 137
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 126/315 (40%), Gaps = 86/315 (27%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHD----------NPSRSQHLLASAISNSHSSSGSLVGP 240
+ I+G + V A+ IA +L + N SR L I S GSL+G
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQC--GSLIG- 118
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWSRS----------------------LYSAPRDD 278
A T I I G GD + + L S P+
Sbjct: 119 KAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGA 178
Query: 279 LSSKEFSLRL--VCPVANIG-GVIGKGGAI----INQIRQESGAAIKVDSSST-EGDDCL 330
SL L V AN G V G+ GA+ + +++Q SG A+ S S G D
Sbjct: 179 TIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPG 238
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGS 390
SS+EF LVP IGC+IG+ GS
Sbjct: 239 TQTSSQEF------------------------------------LVPNDLIGCVIGRQGS 262
Query: 391 IITEMRRLTKANIRI 405
I+E+R+++ A+I+I
Sbjct: 263 KISEIRQMSGAHIKI 277
>gi|193083110|ref|NP_001122384.1| poly(rC)-binding protein 2 isoform e [Homo sapiens]
gi|291389255|ref|XP_002711064.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
gi|348581079|ref|XP_003476305.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cavia porcellus]
gi|184186908|gb|ACC69194.1| poly(rC) binding protein 2 [Mus musculus]
gi|208967068|dbj|BAG73548.1| poly(rC) binding protein 2 [synthetic construct]
Length = 361
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 144/339 (42%), Gaps = 71/339 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVT 175
Query: 212 --LHDNPSRSQHLLAS----------AISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
PS S + A + S H++ + P P + + G Y
Sbjct: 176 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP 235
Query: 260 KGD----------------TAGD--WSRSLYSAPRD------DLSSKEFSLRLVCPVANI 295
+ D T G+ +S S+P D S++ S L P I
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLI 295
Query: 296 GGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
G +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 296 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 334
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 127 ELRGDEDSDGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
E++G D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 270 EVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VE 324
Query: 186 LRSDELVQISGEASVVKKALCQIASRL 212
+D V I+G A+ + A I RL
Sbjct: 325 GSTDRQVTITGSAASISLAQYLINVRL 351
>gi|134026176|gb|AAI35317.1| LOC733863 protein [Xenopus (Silurana) tropicalis]
Length = 475
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 37/183 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R ++ ++I I E GS ER+VT+ +D
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GSCPERIVTITGPTD------- 69
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---------VTAKLLVPSDQIGCVI 155
A+FK + L+ +ED + VT +L+VP+ Q G +I
Sbjct: 70 ----------AIFKAFSMI---ALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLI 116
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG ++ IR TGAQ+++ D LP+ R+ V ISG + + + QI + ++
Sbjct: 117 GKGGSKIKEIRESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLES 172
Query: 216 PSR 218
P +
Sbjct: 173 PPK 175
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 32/170 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS--------TEGDDCLITVSS 335
++RL+ +G +IGK G + ++R+ESGA I + S T D + S
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFKAFS 76
Query: 336 K---EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+F ED ++ + V +P T RL+VP S+ G LIGKGGS I
Sbjct: 77 MIALKFEEDINASMTNSTVTSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 123
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
E+R T A +++ + LP + + V ISG DA+IQ + ++
Sbjct: 124 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQI 165
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + SC R +V
Sbjct: 10 EGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----SCPER---IV 62
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
I+G + KA IA + ++ + ++++NS +S V
Sbjct: 63 TITGPTDAIFKAFSMIALKFEED-------INASMTNSTVTSKPPV-------------- 101
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 102 --------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRES 129
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 130 TGAQVQV 136
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 123/291 (42%), Gaps = 70/291 (24%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDETNAFED 104
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+
Sbjct: 104 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTI------------ 151
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI-VQ 163
S DA+ + ++ L E G + + P G +I GGQ+ +
Sbjct: 152 -----SGTPDAIIQCVKQICVVML---ESPPKGATIPYR---PKPASGPIIFAGGQVRAE 200
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR----- 218
I + G + + + P+ A I G+ ++ + S H N +
Sbjct: 201 TILASAGNHTVLAQPQPAPAFA--------IQGQYAIPHPDV----SSAHANYTLLFLFI 248
Query: 219 --SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
QHLL S ++ H + + T TP+ G T + P
Sbjct: 249 CFGQHLL-STLTKLHQLA---MQHTPFTPL--------------GQTTPGF-------PG 283
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
D +S S L P IG +IG+ G+ IN+IRQ SGA IK+ ++S EG+
Sbjct: 284 LDATSPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANAS-EGN 333
>gi|390479167|ref|XP_002762342.2| PREDICTED: RNA-binding protein Nova-2-like [Callithrix jacchus]
Length = 608
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 22/213 (10%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 133 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 192
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEE----LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
F++ + + ++ + E L+ + AKL+VP+ G +IGKG
Sbjct: 193 HS---FIA---EKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 246
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P
Sbjct: 247 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQS 303
Query: 219 SQHL------LASAISNSHSSSGSLVGPTAATP 245
S L +A ++NS+ + P P
Sbjct: 304 SSCLNISYANVAGPVANSNPTGSPYASPADVLP 336
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 94/189 (49%), Gaps = 20/189 (10%)
Query: 269 RSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS----- 323
S Y+ P + L E+ L+++ P G +IGKGG I Q+++E+GA IK+ S
Sbjct: 116 HSYYNTP-NLLEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPG 174
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RL 374
T CL+ +++ + + + I VR P+ K E + L TT +L
Sbjct: 175 TTERVCLVQGTAEAL--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKL 232
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
+VP S G +IGKGG+ + + + A +++ K P+ + + +V +SG+ + A
Sbjct: 233 IVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKA 289
Query: 435 LIQVMTRLR 443
+ ++ +++
Sbjct: 290 VSAIVQKVQ 298
>gi|195481990|ref|XP_002101863.1| GE15370 [Drosophila yakuba]
gi|194189387|gb|EDX02971.1| GE15370 [Drosophila yakuba]
Length = 566
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 199/454 (43%), Gaps = 82/454 (18%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 55 NQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 114
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y + TNA + I E ++ + S
Sbjct: 115 HRKENV-GSLEKSITIYGNPENCTNAC-------------------KRILEVMQQEALST 154
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 155 NKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVK 212
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-- 253
G L +N SR+++ +++ + S+ + + P + G+ P+
Sbjct: 213 G---------------LIENMSRAENQISTKLRQSYENDLQAMAPQSLM-FPGLHPMAMM 256
Query: 254 -GPYGGYKGDTAGDW----SRSLYSAPR--------DDLSSKEFSLRLVCPVANIGGVIG 300
P G +T+ + S ++ P +DL + L P +G +IG
Sbjct: 257 STPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTY---LYIPNNAVGAIIG 313
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
G+ I I + S A++K+ + + D L + ++ T+ T E + Q EK
Sbjct: 314 TKGSHIRSIMRFSNASLKI--APLDADKPLDQQTERKV---TIVGTPEGQWKAQYMIFEK 368
Query: 361 IERDSGL------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ R+ G + T LLV +S++G +IGKGG + E++R+T + I+ LP+ L
Sbjct: 369 M-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPP 426
Query: 415 ASEDDEM-VQISGDLDLAKDALIQVMTRLRANLF 447
+ D+E V I G + A R+RA +
Sbjct: 427 SGGDEETPVHIIGPFYSVQSA----QRRIRAMML 456
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 296 QETTYLYI-PNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 354
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E G +D ++T +LLV S Q+G +
Sbjct: 355 PEG-------------QWKAQYMIFEKMREEGFMCGTDDV----RLTVELLVASSQVGRI 397
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLH 213
IGKGGQ V+ ++ TG+ I++ + P + V I G V+ A +I A L
Sbjct: 398 IGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSAQRRIRAMMLS 457
Query: 214 DNP 216
NP
Sbjct: 458 TNP 460
>gi|156388117|ref|XP_001634548.1| predicted protein [Nematostella vectensis]
gi|156221632|gb|EDO42485.1| predicted protein [Nematostella vectensis]
Length = 338
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 124/294 (42%), Gaps = 36/294 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
+ V + + + IGSIIG+ G +KQ R ++ + I I + + ER+V+V D
Sbjct: 26 NLVLKMIMQGKDIGSIIGKEGSTIKQFRQESNAHINISDG--STPERIVSVTGTKD---- 79
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
A F + + + +EL+ + S+ VT +L+VP Q G +IGKGG
Sbjct: 80 ----------AVVTAFALIGQKLEDELKSNSKSNTTPPVTLRLIVPGSQCGSIIGKGGAK 129
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
++ IR +GA + ++ E LP + R+ V +SG ++ + + + + P R H
Sbjct: 130 IKEIREVSGASV-VVAGEFLPGSSERA---VTLSGTPEALETCIDLLCGVMIEFPPRG-H 184
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG-------GYKGDTAGDWSRSLYSA 274
+ G GP G GPYG G+
Sbjct: 185 PMPYTPHKLQQQFG-FYGPPQG---FGYP---GPYGMPHAFPNGFMAGRGPYGGGRKGKG 237
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
P S + +G +IG+ G+ I IRQ SGA+IK+ S GDD
Sbjct: 238 PPPPQPGPITSHTMTILKGAVGSIIGQKGSYITGIRQMSGASIKIGDSEN-GDD 290
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 18/168 (10%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S L+++ +IG +IGK G+ I Q RQES A I + ST + +++V+
Sbjct: 24 SSNLVLKMIMQGKDIGSIIGKEGSTIKQFRQESNAHINISDGST--PERIVSVTG----- 76
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSG---LISFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
T A + A + + ++++ +S T RL+VP S+ G +IGKGG+ I E+R
Sbjct: 77 -TKDAVVTAFALIGQKLEDELKSNSKSNTTPPVTLRLIVPGSQCGSIIGKGGAKIKEIRE 135
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGD---LDLAKDALIQVMTRL 442
++ A++ ++ E LP + V +SG L+ D L VM
Sbjct: 136 VSGASV-VVAGEFLP---GSSERAVTLSGTPEALETCIDLLCGVMIEF 179
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 129/364 (35%), Gaps = 127/364 (34%)
Query: 137 GH--QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
GH + K+++ IG +IGK G ++ R E+ A I I D P + +V +
Sbjct: 22 GHSSNLVLKMIMQGKDIGSIIGKEGSTIKQFRQESNAHINI-SDGSTP------ERIVSV 74
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG 254
+G V A I +L D SNS S++ TP V
Sbjct: 75 TGTKDAVVTAFALIGQKLEDE----------LKSNSKSNT---------TPPV------- 108
Query: 255 PYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
+LRL+ P + G +IGKGGA I +IR+ SG
Sbjct: 109 ------------------------------TLRLIVPGSQCGSIIGKGGAKIKEIREVSG 138
Query: 315 AAIKVDSSSTEG-DDCLITVS-SKEFFEDTLSATIEAVVRLQPR------CSEKIERDSG 366
A++ V G + +T+S + E E + ++ PR K+++ G
Sbjct: 139 ASVVVAGEFLPGSSERAVTLSGTPEALETCIDLLCGVMIEFPPRGHPMPYTPHKLQQQFG 198
Query: 367 -----------------------------------------------LISFTTRLLVPTS 379
+ S T +L
Sbjct: 199 FYGPPQGFGYPGPYGMPHAFPNGFMAGRGPYGGGRKGKGPPPPQPGPITSHTMTIL--KG 256
Query: 380 RIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVM 439
+G +IG+ GS IT +R+++ A+I+I EN +D V I+G + A +
Sbjct: 257 AVGSIIGQKGSYITGIRQMSGASIKIGDSEN-----GDDKREVLITGTAEAVGLAQFLIN 311
Query: 440 TRLR 443
RLR
Sbjct: 312 ARLR 315
>gi|14670369|ref|NP_127501.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|14670373|ref|NP_127503.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|291575148|ref|NP_001167571.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|114587184|ref|XP_001170982.1| PREDICTED: poly(rC)-binding protein 4 isoform 12 [Pan troglodytes]
gi|114587188|ref|XP_001171026.1| PREDICTED: poly(rC)-binding protein 4 isoform 14 [Pan troglodytes]
gi|410037040|ref|XP_003950173.1| PREDICTED: poly(rC)-binding protein 4 [Pan troglodytes]
gi|12230429|sp|P57723.1|PCBP4_HUMAN RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|9957167|gb|AAG09241.1|AF176330_1 alphaCP-4 [Homo sapiens]
gi|10436225|dbj|BAB14761.1| unnamed protein product [Homo sapiens]
gi|12804299|gb|AAH03008.1| Poly(rC) binding protein 4 [Homo sapiens]
gi|13278756|gb|AAH04153.1| Poly(rC) binding protein 4 [Homo sapiens]
gi|119585571|gb|EAW65167.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585572|gb|EAW65168.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585573|gb|EAW65169.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585576|gb|EAW65172.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585577|gb|EAW65173.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|261861404|dbj|BAI47224.1| poly(rC) binding protein 4 [synthetic construct]
gi|410227440|gb|JAA10939.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410227442|gb|JAA10940.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410227444|gb|JAA10941.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262892|gb|JAA19412.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262894|gb|JAA19413.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262896|gb|JAA19414.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410301312|gb|JAA29256.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410301314|gb|JAA29257.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350315|gb|JAA41761.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350319|gb|JAA41763.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350321|gb|JAA41764.1| poly(rC) binding protein 4 [Pan troglodytes]
Length = 403
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 139/302 (46%), Gaps = 43/302 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVFH 74
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 75 AVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH--- 221
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 127 IRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIPY 182
Query: 222 ---------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLY 272
LL++ S V P T + ++ P+ D
Sbjct: 183 HPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLD------ 236
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T
Sbjct: 237 --PGTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVT 290
Query: 333 VS 334
++
Sbjct: 291 IT 292
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRI 405
T A +++
Sbjct: 131 TGAQVQV 137
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 129/298 (43%), Gaps = 52/298 (17%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHD----------NPSRSQHLLASAISNSHSSSGSLVGP 240
+ I+G + V A+ IA +L + N SR L I S GSL+G
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQC--GSLIG- 118
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWS-RSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
A T I I G GD + + R++ + D + +R +C
Sbjct: 119 KAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPD--AIILCVRQIC--------- 167
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE---DTLSATIEAVVRLQPR 356
A+I + GA I S + G + +S+ + F + T V +LQ
Sbjct: 168 ----AVILE-SPPKGATIPYHPSLSLGT---VLLSANQGFSVQGQYGAVTPAEVTKLQQL 219
Query: 357 CSEKIE---------RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
S + D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 220 SSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>gi|386780909|ref|NP_001247796.1| poly(rC)-binding protein 4 [Macaca mulatta]
gi|332216103|ref|XP_003257183.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|332216105|ref|XP_003257184.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|332216107|ref|XP_003257185.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|402859923|ref|XP_003894386.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Papio anubis]
gi|402859925|ref|XP_003894387.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Papio anubis]
gi|402859927|ref|XP_003894388.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Papio anubis]
gi|403291118|ref|XP_003936646.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403291120|ref|XP_003936647.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Saimiri
boliviensis boliviensis]
gi|355559585|gb|EHH16313.1| hypothetical protein EGK_11579 [Macaca mulatta]
gi|355746662|gb|EHH51276.1| hypothetical protein EGM_10621 [Macaca fascicularis]
gi|380788331|gb|AFE66041.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|380788333|gb|AFE66042.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|383414707|gb|AFH30567.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|384943104|gb|AFI35157.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
Length = 403
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 139/302 (46%), Gaps = 43/302 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVFH 74
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 75 AVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH--- 221
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 127 IRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIPY 182
Query: 222 ---------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLY 272
LL++ S V P T + ++ P+ D
Sbjct: 183 HPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLD------ 236
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T
Sbjct: 237 --PGTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVT 290
Query: 333 VS 334
++
Sbjct: 291 IT 292
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRI 405
T A +++
Sbjct: 131 TGAQVQV 137
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 129/298 (43%), Gaps = 52/298 (17%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHD----------NPSRSQHLLASAISNSHSSSGSLVGP 240
+ I+G + V A+ IA +L + N SR L I S GSL+G
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQC--GSLIG- 118
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWS-RSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
A T I I G GD + + R++ + D + +R +C
Sbjct: 119 KAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPD--AIILCVRQIC--------- 167
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE---DTLSATIEAVVRLQPR 356
A+I + GA I S + G + +S+ + F + T V +LQ
Sbjct: 168 ----AVILE-SPPKGATIPYHPSLSLGT---VLLSANQGFSVQGQYGAVTPAEVTKLQQL 219
Query: 357 CSEKIE---------RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
S + D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 220 SSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>gi|353237678|emb|CCA69645.1| related to PBP2-PAB1 binding protein [Piriformospora indica DSM
11827]
Length = 406
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 126/285 (44%), Gaps = 44/285 (15%)
Query: 40 PEDTVY-RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
P T++ R L + IIG+GG V ++R + +K+ + E++PG+ ER++ V A D
Sbjct: 103 PASTIHMRCLIVTQDASIIIGKGGSHVNEIREKSNAKVMVSESIPGNPERILNVSGALD- 161
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
A F + R I +E G G VT K ++P ++G VIGKG
Sbjct: 162 -------------AVSKAFGLIVRRINDEPMGP-SVPGSRAVTIKFIIPHSRMGSVIGKG 207
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ I+ +GA++ + LP R ++ ++G A + A I + L
Sbjct: 208 GAKIKEIQEASGARLN-ASEGMLPGSTER---ILSVTGVADAIHIATYYIGNILIQ---- 259
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDT--AGDWSRSLYSA-- 274
Q A+ S+ S P MG GG G G + + A
Sbjct: 260 -QQEAHGAVGLSYRQS---------RPPRAFNETMG--GGAPGQQYFPGQYQSPMMPAAV 307
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
P L +++ + P +G +IGKGGA IN+IRQ S + IK+
Sbjct: 308 PSGPLQTQQ----IYIPNDLVGCIIGKGGAKINEIRQTSQSQIKI 348
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 101/225 (44%), Gaps = 37/225 (16%)
Query: 26 RRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPG 84
RR + + G +++ P ++GS+IG+GG +K+++ + +++ E +PG
Sbjct: 172 RRINDEPMGPSVPGSRAVTIKFIIPHSRMGSVIGKGGAKIKEIQEASGARLNASEGMLPG 231
Query: 85 SEERVVTVYSASDETN--AFEDGDKFVSPAQDALFKV--------HDRVIAEEL----RG 130
S ER+++V +D + + G+ + Q+A V R E + G
Sbjct: 232 STERILSVTGVADAIHIATYYIGNILIQ-QQEAHGAVGLSYRQSRPPRAFNETMGGGAPG 290
Query: 131 DEDSDGGHQV-------------TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILK 177
+ G +Q T ++ +P+D +GC+IGKGG + IR + +QI+I++
Sbjct: 291 QQYFPGQYQSPMMPAAVPSGPLQTQQIYIPNDLVGCIIGKGGAKINEIRQTSQSQIKIME 350
Query: 178 DEHLPSCAL--------RSDELVQISGEASVVKKALCQIASRLHD 214
+ + LV I+G+ ++ A+ + RL +
Sbjct: 351 PGAVGVGVGGQQAGPPNEGERLVVITGQPHNIQMAVGMLYHRLEE 395
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 8/108 (7%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IGKGG+ +N+IR++S A + V S + ++ VS D +S +VR R
Sbjct: 121 IIGKGGSHVNEIREKSNAKVMVSESIPGNPERILNVSGA---LDAVSKAFGLIVR---RI 174
Query: 358 SEKIERDS--GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
+++ S G + T + ++P SR+G +IGKGG+ I E++ + A +
Sbjct: 175 NDEPMGPSVPGSRAVTIKFIIPHSRMGSVIGKGGAKIKEIQEASGARL 222
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 27/36 (75%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
T ++ +P +GC+IGKGG+ I E+R+ +++ I+I+
Sbjct: 314 TQQIYIPNDLVGCIIGKGGAKINEIRQTSQSQIKIM 349
>gi|296225349|ref|XP_002758447.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Callithrix
jacchus]
gi|296225353|ref|XP_002758449.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Callithrix
jacchus]
gi|297671175|ref|XP_002813714.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pongo abelii]
gi|297671177|ref|XP_002813715.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Pongo abelii]
gi|395733705|ref|XP_003776278.1| PREDICTED: poly(rC)-binding protein 4 [Pongo abelii]
Length = 403
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 139/302 (46%), Gaps = 43/302 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVFH 74
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 75 AVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH--- 221
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 127 IRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIPY 182
Query: 222 ---------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLY 272
LL++ S V P T + ++ P+ D
Sbjct: 183 HPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLD------ 236
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T
Sbjct: 237 --PGTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVT 290
Query: 333 VS 334
++
Sbjct: 291 IT 292
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRI 405
T A +++
Sbjct: 131 TGAQVQV 137
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 129/298 (43%), Gaps = 52/298 (17%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHD----------NPSRSQHLLASAISNSHSSSGSLVGP 240
+ I+G + V A+ IA +L + N SR L I S GSL+G
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQC--GSLIG- 118
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWS-RSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
A T I I G GD + + R++ + D + +R +C
Sbjct: 119 KAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPD--AIILCVRQIC--------- 167
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE---DTLSATIEAVVRLQPR 356
A+I + GA I S + G + +S+ + F + T V +LQ
Sbjct: 168 ----AVILE-SPPKGATIPYHPSLSLGT---VLLSANQGFSVQGQYGAVTPAEVTKLQQL 219
Query: 357 CSEKIE---------RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
S + D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 220 SSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>gi|225000564|gb|AAI72604.1| Neuro-oncological ventral antigen 2 [synthetic construct]
Length = 583
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 127 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 186
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 187 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 243
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P S
Sbjct: 244 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSC 300
Query: 222 L------LASAISNSHSSSGSLVGPTAATP 245
L +A ++NS+ + P P
Sbjct: 301 LNISYANVAGPVANSNPTGSPYASPADVLP 330
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 87/174 (50%), Gaps = 19/174 (10%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKEF 338
+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 124 YFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEAL 183
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKGG 389
+ + + I VR P+ K E + L TT +L+VP S G +IGKGG
Sbjct: 184 --NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 241
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 242 ATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 292
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 87/212 (41%), Gaps = 51/212 (24%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
K+L+PS G +IGKGGQ + ++ ETGA I++ K + LVQ G A +
Sbjct: 127 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ--GTAEALN 184
Query: 203 KALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD 262
IA ++ + P Q + + N ++ P D
Sbjct: 185 AVHSFIAEKVREIP---QAMTKPEVVN----------------------ILQPQTTMNPD 219
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
A +L+ P + G +IGKGGA + + ++SGA +++ S
Sbjct: 220 RAKQA-------------------KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL-SQ 259
Query: 323 STEGDDC---LITVSSK-EFFEDTLSATIEAV 350
EG + ++TVS + E +SA ++ V
Sbjct: 260 KPEGINLQERVVTVSGEPEQVHKAVSAIVQKV 291
>gi|363747263|ref|XP_003643960.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Gallus
gallus]
Length = 349
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 149/343 (43%), Gaps = 80/343 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGP-------YGGY-- 259
S + A SSGS P A + + L GP G Y
Sbjct: 173 GVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAI 232
Query: 260 ---------------------KGDTAGDWSRSLYSAPRD-------DLSSKEFSLRLVCP 291
G+T +S S+P D S++ S L P
Sbjct: 233 PQPDLTKLHQLAMQQSHFPMSHGNTG--FSGIESSSPEVKGYWAGLDASAQTTSHELTIP 290
Query: 292 VANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
IG +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 291 NDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 333
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I +D V
Sbjct: 277 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVT 331
Query: 194 ISGEASVVKKA 204
I+G A+ + A
Sbjct: 332 ITGSAASISLA 342
>gi|388579892|gb|EIM20211.1| hypothetical protein WALSEDRAFT_33458 [Wallemia sebi CBS 633.66]
Length = 349
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 135/306 (44%), Gaps = 59/306 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L R IIG+GG+ + ++R + K+ + ++P + ER++T D
Sbjct: 41 RSLIDTRDASIIIGKGGQNIAKIRETSGIKLVVSGSIPNNPERLLTATGQLD-------- 92
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
A F + R I +E G VT K +P+ ++G +IG+ G ++ I
Sbjct: 93 ------AVSKAFGLVVRTINDEDFNQPSLPGSKAVTLKFAIPNMKMGFIIGRAGAKIKEI 146
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN---PSRSQHL 222
+ +GA+I D LP+ ++ ++ I G A V A+ + L D PS+ +
Sbjct: 147 QEASGAKIST-SDYVLPNS---TERVLSIDGVADAVHIAIYHVGMILADQTAVPSKERGD 202
Query: 223 LASAISNSH---SSSGSLVG-----------PTAATPIVGIAP--LMG--PYGGYKGDTA 264
+ S+ SS GS PT A+ + G AP L G P+GGY
Sbjct: 203 RRRVQNQSYGDTSSYGSPAPYAAAPPVYGMLPTYASTVPGPAPAQLGGAPPFGGYP---- 258
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV----D 320
+ P + +S+ ++ P +GG+IGKGG+ INQIR S +IK+ +
Sbjct: 259 --------TLPVAETTSQ----KIYVPNNLVGGLIGKGGSKINQIRYTSQCSIKILEPGE 306
Query: 321 SSSTEG 326
TEG
Sbjct: 307 GEQTEG 312
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 12/142 (8%)
Query: 267 WSRSLYSAP---RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
+ R Y P +DD + ++R + + +IGKGG I +IR+ SG + V S
Sbjct: 20 YERPSYKRPHIVKDD--NPYLTVRSLIDTRDASIIIGKGGQNIAKIRETSGIKLVVSGSI 77
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDS--GLISFTTRLLVPTSRI 381
+ L+T + + D +S VVR E + S G + T + +P ++
Sbjct: 78 PNNPERLLTATGQ---LDAVSKAFGLVVRTI--NDEDFNQPSLPGSKAVTLKFAIPNMKM 132
Query: 382 GCLIGKGGSIITEMRRLTKANI 403
G +IG+ G+ I E++ + A I
Sbjct: 133 GFIIGRAGAKIKEIQEASGAKI 154
>gi|14141166|ref|NP_114366.1| poly(rC)-binding protein 2 isoform b [Homo sapiens]
gi|157041229|ref|NP_001096635.1| poly(rC)-binding protein 2 isoform 1 [Mus musculus]
gi|73996203|ref|XP_534789.2| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Canis lupus
familiaris]
gi|149714829|ref|XP_001504573.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Equus caballus]
gi|297692024|ref|XP_002823365.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pongo abelii]
gi|301775803|ref|XP_002923308.1| PREDICTED: poly(rC)-binding protein 2-like [Ailuropoda melanoleuca]
gi|332206039|ref|XP_003252097.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Nomascus
leucogenys]
gi|332839234|ref|XP_003313706.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pan troglodytes]
gi|395541533|ref|XP_003772697.1| PREDICTED: poly(rC)-binding protein 2 [Sarcophilus harrisii]
gi|403296804|ref|XP_003939285.1| PREDICTED: poly(rC)-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410964553|ref|XP_003988818.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Felis catus]
gi|426224368|ref|XP_004006343.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Ovis aries]
gi|426372753|ref|XP_004053282.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Gorilla gorilla
gorilla]
gi|2500577|sp|Q61990.1|PCBP2_MOUSE RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=CTBP; Short=CBP; AltName: Full=Putative
heterogeneous nuclear ribonucleoprotein X; Short=hnRNP X
gi|436894|gb|AAA03705.1| nucleic acid binding protein [Mus musculus]
gi|12654635|gb|AAH01155.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|13172240|gb|AAK14059.1| alpha-CP2 [Mus musculus]
gi|50925529|gb|AAH78909.1| Pcbp2 protein [Rattus norvegicus]
gi|119617113|gb|EAW96707.1| poly(rC) binding protein 2, isoform CRA_b [Homo sapiens]
gi|148672029|gb|EDL03976.1| poly(rC) binding protein 2, isoform CRA_c [Mus musculus]
gi|149031920|gb|EDL86832.1| rCG50739, isoform CRA_a [Rattus norvegicus]
gi|158257714|dbj|BAF84830.1| unnamed protein product [Homo sapiens]
Length = 362
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 141/347 (40%), Gaps = 86/347 (24%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVT 175
Query: 212 --LHDNPSRSQHLLAS----------AISNSHSSSGSLVGPTAATPIVGIAPLMGPYG-- 257
PS S + A + S H++ + P P + + G Y
Sbjct: 176 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP 235
Query: 258 ------------------------GYKG------DTAGDWSRSLYSAPRDDLSSKEFSLR 287
G+ G + G W+ D S++ S
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGL-------DASAQTTSHE 288
Query: 288 LVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
L P IG +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 289 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 335
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I +D V
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVT 333
Query: 194 ISGEASVVKKALCQIASRL 212
I+G A+ + A I RL
Sbjct: 334 ITGSAASISLAQYLINVRL 352
>gi|432881653|ref|XP_004073885.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-B-like isoform 1 [Oryzias latipes]
Length = 585
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 177/401 (44%), Gaps = 63/401 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T SKI I + G+ E+ +T++S + +
Sbjct: 194 DIPLRVLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITIHSTPEGCS 253
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A + + + E L D+ ++ K+L ++ +G +IGK G+
Sbjct: 254 -------------KACTTIMEIMQKEAL----DTKFTEEIPLKILAHNNFVGRLIGKEGR 296
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
++ I +TG +I I L+D L + + + G +A ++ ++ +++
Sbjct: 297 NLKKIEQDTGTKITISPLQDLTL----YNPERTITVKGSIEACSRAEEEVMKKVREAYES 352
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG---PYGGYKGDTAGDWSRSLY 272
+ +L ++ I + ++ L + TP G+ P M P G + G + S
Sbjct: 353 DMAAMNLQSNLIPGLNLNALGLF--PSGTP--GMGPSMSNFPPSGAHGGCS------SFG 402
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P + ++ L P +G +IGK G I Q+ +GA+IK+ + EG D
Sbjct: 403 GQPESE------TVHLFIPALAVGAIIGKQGQHIKQLSHFAGASIKI--APAEGMDAKQR 454
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGK 387
+ + EA + Q R K++ ++ + + VP+ G +IGK
Sbjct: 455 MV-------IIVGPPEAQFKAQCRIFGKLKEENFFGPKEEVKLEAHIKVPSFAAGRVIGK 507
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL 428
GG + E++ LT A + ++P++ P D +V+ISG
Sbjct: 508 GGKTVNELQNLTCAEV-VVPRDQTPD--ENDQVIVKISGHF 545
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 41/181 (22%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P +G+IIG+ G+ +KQL + I+I +++R+V +
Sbjct: 405 PESETVHLFIPALAVGAIIGKQGQHIKQLSHFAGASIKIAPAEGMDAKQRMVII------ 458
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIA----EELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
V P +A FK R+ E G ++ ++ A + VPS G V
Sbjct: 459 ----------VGPP-EAQFKAQCRIFGKLKEENFFGPKEEV---KLEAHIKVPSFAAGRV 504
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE----LVQISGEASVVKKALCQIAS 210
IGKGG+ V +++ T A++ + +D+ DE +V+ISG CQ+A
Sbjct: 505 IGKGGKTVNELQNLTCAEVVVPRDQ-------TPDENDQVIVKISGHFFA-----CQLAQ 552
Query: 211 R 211
R
Sbjct: 553 R 553
>gi|332856422|ref|XP_524310.3| PREDICTED: RNA-binding protein Nova-2 [Pan troglodytes]
Length = 607
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 22/213 (10%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 151 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 210
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEE----LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
F++ + + ++ + E L+ + AKL+VP+ G +IGKG
Sbjct: 211 HS---FIA---EKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 264
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P
Sbjct: 265 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQS 321
Query: 219 SQHL------LASAISNSHSSSGSLVGPTAATP 245
S L +A ++NS+ + P P
Sbjct: 322 SSCLNISYANVAGPVANSNPTGSPYASPADVLP 354
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS-----STEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 147 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 206
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 207 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 264
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 265 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 316
>gi|116787292|gb|ABK24450.1| unknown [Picea sitchensis]
Length = 357
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 158/357 (44%), Gaps = 55/357 (15%)
Query: 33 RDQFIIGPED------TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVP 83
RD I P + + R L GS+IG+GG V + + ++I++ E P
Sbjct: 30 RDGLIYEPSEDGSKTSSCLRLLVSNAAAGSVIGKGGATVSDFQTQSGARIQLSRNHEFFP 89
Query: 84 GSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA- 142
G+ +R++ V + +E + + ++ + L ED++ + T+
Sbjct: 90 GTTDRIILVTGSINE-----------------ILTAANLILQKLLSEAEDNNDVDEKTSQ 132
Query: 143 -KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASV 200
+L++P+ G +IGKGG +++ + A I++ +D+ LP SD LV I+G
Sbjct: 133 VRLVLPNSVCGGIIGKGGATIKSFVEHSQASIKLSSQDQILPGV---SDRLVTITGTLEQ 189
Query: 201 VKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGP--YGG 258
+A+ I S+L ++P+ +Q+ A S +G P TP+ P G YG
Sbjct: 190 QLRAIFLIVSKLAEDPNYAQYANAPLSYTGGSVAGIQGIPGGYTPVGYGLPNYGSSVYGV 249
Query: 259 YKGDTAGDWSRSLYSAPRDDL--------SSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
+ G + + A R L S S+++ P +G ++G+ G I I+
Sbjct: 250 NARNNKGLMAPLV--AMRSPLPIGVPLVASGALTSVKMAVPDDRVGVIVGRAGRTILDIQ 307
Query: 311 QESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR----LQPRCSEKIER 363
Q SGA IK+ S GD +S + T+S I+AV L+ R S +ER
Sbjct: 308 QVSGAKIKI---SDRGD----FISGTNDRQVTISGPIDAVQHARHMLEQRLSSDLER 357
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 18/196 (9%)
Query: 255 PYGGYKGDTAGDWSR-SLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQES 313
P GY + R L P +D S LRL+ A G VIGKGGA ++ + +S
Sbjct: 16 PASGYSTSPSRSPKRDGLIYEPSEDGSKTSSCLRLLVSNAAAGSVIGKGGATVSDFQTQS 75
Query: 314 GAAIKVDSS-----STEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIE-RDSGL 367
GA I++ + T L+T S E A + LQ SE + D
Sbjct: 76 GARIQLSRNHEFFPGTTDRIILVTGSINEILT-------AANLILQKLLSEAEDNNDVDE 128
Query: 368 ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKEN-LPKIASEDDEMVQISG 426
+ RL++P S G +IGKGG+ I ++A+I++ ++ LP ++ D +V I+G
Sbjct: 129 KTSQVRLVLPNSVCGGIIGKGGATIKSFVEHSQASIKLSSQDQILPGVS---DRLVTITG 185
Query: 427 DLDLAKDALIQVMTRL 442
L+ A+ ++++L
Sbjct: 186 TLEQQLRAIFLIVSKL 201
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
+ ++ VP R+G ++G+ G I ++++++ A I+I + + I+ +D V ISG +D
Sbjct: 282 SVKMAVPDDRVGVIVGRAGRTILDIQQVSGAKIKISDRGDF--ISGTNDRQVTISGPIDA 339
Query: 431 AKDALIQVMTRLRANL 446
+ A + RL ++L
Sbjct: 340 VQHARHMLEQRLSSDL 355
>gi|45384194|ref|NP_990402.1| insulin-like growth factor 2 mRNA-binding protein 1 [Gallus gallus]
gi|82227598|sp|O42254.1|IF2B1_CHICK RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=IGF-II mRNA-binding protein 1; AltName: Full=VICKZ
family member 1; AltName: Full=Zip code-binding protein
1; Short=ZBP-1; Short=Zipcode-binding protein 1
gi|2570921|gb|AAB82295.1| zipcode-binding protein [Gallus gallus]
Length = 576
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 165/382 (43%), Gaps = 55/382 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++++S +
Sbjct: 193 PVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGK 157
+A ++I E ++ + +D+ +V K+L ++ +G +IGK
Sbjct: 253 CSAA------------------CKMILEIMQKEAKDTKTADEVPLKILAHNNFVGRLIGK 294
Query: 158 GGQIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
G+ ++ + +T +I I L+D L + + + G KA +I ++ +
Sbjct: 295 EGRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGSIENCCKAEQEIMKKVRE- 349
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
++ +A+ SH G + P A P +G S + P
Sbjct: 350 --AYENDVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPPP-----SSVSGAAPYSSFMPP 402
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ ++ + P +G +IGK G I Q+ + + A+IK+ T + V
Sbjct: 403 EQE------TVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVV-- 454
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R K++ ++ + T + VP S G +IGKGG
Sbjct: 455 -------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGK 507
Query: 391 IITEMRRLTKANIRILPKENLP 412
+ E++ LT A + ++P++ P
Sbjct: 508 TVNELQNLTAAEV-VVPRDQTP 528
>gi|392558575|gb|EIW51762.1| hypothetical protein TRAVEDRAFT_156921 [Trametes versicolor
FP-101664 SS1]
Length = 378
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 124/266 (46%), Gaps = 27/266 (10%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIG+ G V ++R + +++ + E++PG+ ER++ V D A
Sbjct: 77 IIGKAGSHVNEIREKSGARVVVSESIPGNPERILNVSGPLD--------------AVSKA 122
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT K ++P+ ++G VIGKGG ++ I+ +GA++
Sbjct: 123 FGLIVRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQEASGARLN-A 181
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
+ LP R L+ +SG A + A I + L + R S+ S + S
Sbjct: 182 SETMLPGSTER---LLSVSGVADAIHIATYYIGNILIEANERMPTTNNSSYRPSSYQASS 238
Query: 237 LVGPTAATPIVGIAPLMGPY---GGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVA 293
P ++TP G P G GGY + ++ + +AP S+ + ++ P
Sbjct: 239 --APPSSTP-RGRPPYSGSSYVPGGYGQNP---YAPAAPAAPAPGPPSQLQTQQIYIPND 292
Query: 294 NIGGVIGKGGAIINQIRQESGAAIKV 319
+G +IGKGGA IN+IR S + IK+
Sbjct: 293 LVGCIIGKGGAKINEIRHMSASQIKI 318
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 96/215 (44%), Gaps = 48/215 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDETN--AF 102
+++ P ++GS+IG+GG +K+++ + +++ ET+ PGS ER+++V +D + +
Sbjct: 149 KFMIPNSRMGSVIGKGGTKIKEIQEASGARLNASETMLPGSTERLLSVSGVADAIHIATY 208
Query: 103 EDGDKFV-----------SPAQDALFKVHDRVIAEELRGDEDSDGGHQV----------- 140
G+ + S + + ++ + RG G V
Sbjct: 209 YIGNILIEANERMPTTNNSSYRPSSYQASSAPPSSTPRGRPPYSGSSYVPGGYGQNPYAP 268
Query: 141 ---------------TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILK-------- 177
T ++ +P+D +GC+IGKGG + IR + +QI+I++
Sbjct: 269 AAPAAPAPGPPSQLQTQQIYIPNDLVGCIIGKGGAKINEIRHMSASQIKIMEPGAVGVGL 328
Query: 178 DEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+ + LV I+G+ + ++ A+ + SRL
Sbjct: 329 NGAAAPAGSEGERLVVITGQPANIQMAVQLLYSRL 363
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 13/173 (7%)
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+GD + S + S+ + + +R + + +IGK G+ +N+IR++SGA + V
Sbjct: 39 QGDGSATTSGAPSSSGQPTPPAANIHMRCLIVTQDASIIIGKAGSHVNEIREKSGARVVV 98
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCS-EKIERDS--GLISFTTRLLV 376
S + ++ VS D +S +VR R + E ++ S G + T + ++
Sbjct: 99 SESIPGNPERILNVSGP---LDAVSKAFGLIVR---RINDEPFDKPSVPGSRAVTIKFMI 152
Query: 377 PTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
P SR+G +IGKGG+ I E++ + A R+ E + + + ++ +SG D
Sbjct: 153 PNSRMGSVIGKGGTKIKEIQEASGA--RLNASETM--LPGSTERLLSVSGVAD 201
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 26/36 (72%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
T ++ +P +GC+IGKGG+ I E+R ++ + I+I+
Sbjct: 284 TQQIYIPNDLVGCIIGKGGAKINEIRHMSASQIKIM 319
>gi|321258532|ref|XP_003193987.1| telomere length regulating RNA binding protein; Pbp2p [Cryptococcus
gattii WM276]
gi|317460457|gb|ADV22200.1| Telomere length regulating RNA binding protein, putative; Pbp2p
[Cryptococcus gattii WM276]
Length = 357
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 142/337 (42%), Gaps = 66/337 (19%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
GP+ R L + IIGRGG V ++R + +++ + E++PG+ ER++ V D
Sbjct: 76 GPQQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSGPLD- 134
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
A F + R I +E G VT K ++P+ ++G VIGKG
Sbjct: 135 -------------AVAKAFGLIVRRINDEPFDVPSVPGSRAVTIKFIIPNSRMGSVIGKG 181
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ I+ +GA++ + LP R ++ +SG A V A+ I + L + R
Sbjct: 182 GSKIKEIQEASGARLN-ASEAMLPGSTER---VLSVSGVADAVHIAVYYIGTILLEYQDR 237
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
P AT G Y+ SR
Sbjct: 238 Y--------------------PANAT------------GSYR----QSQSRGPPPNSNAP 261
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST--------EGDDCL 330
+ ++ P A +G +IG+GG+ IN+IR +S I+V T ++ L
Sbjct: 262 PPPGMQTQQIFIPNALVGAIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERL 321
Query: 331 ITVSSKEFFEDTLSATIEAVV-RLQPRCSEKIERDSG 366
+T++ + D ++A + + R++ ++ +E+++G
Sbjct: 322 VTITG---YPDNINAAVALLYSRVEAERAKLVEQNAG 355
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ D ++ S+R + + +IG+GGA +N+IR++S A + V S + ++ VS
Sbjct: 72 KPDPGPQQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSG 131
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
D ++ +VR + G + T + ++P SR+G +IGKGGS I E+
Sbjct: 132 P---LDAVAKAFGLIVRRINDEPFDVPSVPGSRAVTIKFIIPNSRMGSVIGKGGSKIKEI 188
Query: 396 RRLTKANI 403
+ + A +
Sbjct: 189 QEASGARL 196
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 21/185 (11%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKE-- 337
S+ +++ + P + +G VIGKGG+ I +I++ SGA + + G + +++VS
Sbjct: 160 SRAVTIKFIIPNSRMGSVIGKGGSKIKEIQEASGARLNASEAMLPGSTERVLSVSGVADA 219
Query: 338 -------------FFEDTLSATIEAVVRL-QPRCSEKIERDSGLISFTTR-LLVPTSRIG 382
++D A R Q R T+ + +P + +G
Sbjct: 220 VHIAVYYIGTILLEYQDRYPANATGSYRQSQSRGPPPNSNAPPPPGMQTQQIFIPNALVG 279
Query: 383 CLIGKGGSIITEMRRLTKANIRIL-PKENLP--KIASEDDEMVQISGDLDLAKDALIQVM 439
+IG+GGS I E+R + IR+ P +P A+ ++ +V I+G D A+ +
Sbjct: 280 AIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERLVTITGYPDNINAAVALLY 339
Query: 440 TRLRA 444
+R+ A
Sbjct: 340 SRVEA 344
>gi|195350752|ref|XP_002041902.1| GM11285 [Drosophila sechellia]
gi|194123707|gb|EDW45750.1| GM11285 [Drosophila sechellia]
Length = 566
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 189/426 (44%), Gaps = 77/426 (18%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 54 NQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 113
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y + TNA + I E ++ + S
Sbjct: 114 HRKENV-GSLEKSITIYGNPENCTNACKR-------------------ILEVMQQEAIST 153
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 154 NKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVK 211
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-- 253
G L +N SR+++ +++ + S+ + + P + G+ P+
Sbjct: 212 G---------------LIENMSRAENQISTKLRQSYENDLQAMAPQSLM-FPGLHPMAMM 255
Query: 254 -GPYGGYKGDTAGDW----SRSLYSAPR--------DDLSSKEFSLRLVCPVANIGGVIG 300
P G +T+ + S ++ P +DL + L P +G +IG
Sbjct: 256 STPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTY---LYIPNNAVGAIIG 312
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
G+ I I + S A++K+ + + D L + ++ T+ T E + Q EK
Sbjct: 313 TKGSHIRSIMRFSNASLKI--APLDADKPLDQQTERKV---TIVGTPEGQWKAQYMIFEK 367
Query: 361 IERDSGL------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ R+ G + T LLV +S++G +IGKGG + E++R+T + I+ LP+ L
Sbjct: 368 M-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPP 425
Query: 415 ASEDDE 420
+ D+E
Sbjct: 426 SGGDEE 431
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 295 QETTYLYI-PNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 353
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E G +D ++T +LLV S Q+G +
Sbjct: 354 PEG-------------QWKAQYMIFEKMREEGFMCGTDDV----RLTVELLVASSQVGRI 396
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLH 213
IGKGGQ V+ ++ TG+ I++ + P + V I G V+ A +I A L
Sbjct: 397 IGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLS 456
Query: 214 DNP 216
NP
Sbjct: 457 TNP 459
>gi|345785612|ref|XP_855043.2| PREDICTED: RNA-binding protein Nova-2 [Canis lupus familiaris]
Length = 597
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 141 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 200
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 201 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 257
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P S
Sbjct: 258 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSC 314
Query: 222 L------LASAISNSHSSSGSLVGPTAATP 245
L +A ++NS+ + P P
Sbjct: 315 LNISYANVAGPVANSNPTGSPYASPADVLP 344
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 137 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 196
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 197 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 254
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 255 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 306
>gi|348517827|ref|XP_003446434.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Oreochromis niloticus]
Length = 601
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/414 (20%), Positives = 185/414 (44%), Gaps = 60/414 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++++S + +
Sbjct: 199 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKPISIHSTPEGCS 258
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A A + D ++ +E + + +D +V K++ ++ +G +IGK G+
Sbjct: 259 A-------------ACRMILD-IMHQEAKDTKTAD---EVPLKIMAHNNFVGRLIGKEGR 301
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ I +T +I I L+D L + + + G +A +I ++ +
Sbjct: 302 NLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGSIEACCQAEVEIMKKVRE---A 354
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ +H G +G G+ G + AP +
Sbjct: 355 YENDIAAMNQQTHLIPGLNLGALGL-----FPSSSNMPPPPPGNAVGGTPYGCFGAPEQE 409
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
++ + P +G +IGK G I Q+ + +GA+IK+ + + + +
Sbjct: 410 ------TVHVYIPAQAVGAIIGKKGQHIKQLSRFAGASIKIAPAESPDSKMRMVI----- 458
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + + + G +IGKGG +
Sbjct: 459 ----VTGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIKMAAAAAGRVIGKGGKTVN 514
Query: 394 EMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLR 443
E++ LT A + ++P+E P E+D+ +V+I+G LA+ + ++T+++
Sbjct: 515 ELQNLTAAEV-VVPREQTP---DENDQVIVKINGHFYASQLAQRKIRDILTQVK 564
>gi|460771|emb|CAA55016.1| hnRNP-E1 [Homo sapiens]
Length = 356
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 144/325 (44%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 172
Query: 219 S----------QHLLAS--------------AISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + AS A+ H++ P A I G I+P
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAVGYPHATHDLEGPPLDAYSIQGQHTISP 232
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 233 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNL 290
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 291 IGCIIGRQGANINEIRQMSGAQIKI 315
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + +C R ++ ++G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG----NCPER---IITLTGPTN 66
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 67 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 93
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 94 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 62 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 127 ELRGDEDS-DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
E++G S D Q T +L +P++ IGC+IG+ G + IR +GAQI+I
Sbjct: 266 EVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANP-----VE 320
Query: 186 LRSDELVQISGEASVVKKALCQIASRL 212
S V I+G A+ + A I +RL
Sbjct: 321 GSSGRQVTITGSAASISLAQYLINARL 347
>gi|24641097|ref|NP_727451.1| IGF-II mRNA-binding protein, isoform D [Drosophila melanogaster]
gi|24641099|ref|NP_727452.1| IGF-II mRNA-binding protein, isoform E [Drosophila melanogaster]
gi|24641101|ref|NP_727453.1| IGF-II mRNA-binding protein, isoform F [Drosophila melanogaster]
gi|24641103|ref|NP_727454.1| IGF-II mRNA-binding protein, isoform G [Drosophila melanogaster]
gi|24641105|ref|NP_727455.1| IGF-II mRNA-binding protein, isoform H [Drosophila melanogaster]
gi|22832052|gb|AAN09269.1| IGF-II mRNA-binding protein, isoform D [Drosophila melanogaster]
gi|22832053|gb|AAN09270.1| IGF-II mRNA-binding protein, isoform E [Drosophila melanogaster]
gi|22832054|gb|AAN09271.1| IGF-II mRNA-binding protein, isoform F [Drosophila melanogaster]
gi|22832055|gb|AAN09272.1| IGF-II mRNA-binding protein, isoform G [Drosophila melanogaster]
gi|22832056|gb|AAN09273.1| IGF-II mRNA-binding protein, isoform H [Drosophila melanogaster]
Length = 573
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 189/426 (44%), Gaps = 77/426 (18%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 61 NQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 120
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y + TNA + I E ++ + S
Sbjct: 121 HRKENV-GSLEKSITIYGNPENCTNAC-------------------KRILEVMQQEAIST 160
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 161 NKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVK 218
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-- 253
G L +N SR+++ +++ + S+ + + P + G+ P+
Sbjct: 219 G---------------LIENMSRAENQISTKLRQSYENDLQAMAPQSLM-FPGLHPMAMM 262
Query: 254 -GPYGGYKGDTAGDW----SRSLYSAPR--------DDLSSKEFSLRLVCPVANIGGVIG 300
P G +T+ + S ++ P +DL + L P +G +IG
Sbjct: 263 STPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTY---LYIPNNAVGAIIG 319
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
G+ I I + S A++K+ + + D L + ++ T+ T E + Q EK
Sbjct: 320 TRGSHIRSIMRFSNASLKI--APLDADKPLDQQTERKV---TIVGTPEGQWKAQYMIFEK 374
Query: 361 IERDSGL------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ R+ G + T LLV +S++G +IGKGG + E++R+T + I+ LP+ L
Sbjct: 375 M-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPP 432
Query: 415 ASEDDE 420
+ D+E
Sbjct: 433 SGGDEE 438
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 302 QETTYLYI-PNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 360
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E G +D ++T +LLV S Q+G +
Sbjct: 361 PEG-------------QWKAQYMIFEKMREEGFMCGTDDV----RLTVELLVASSQVGRI 403
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLH 213
IGKGGQ V+ ++ TG+ I++ + P + V I G V+ A +I A L
Sbjct: 404 IGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLS 463
Query: 214 DNP 216
NP
Sbjct: 464 TNP 466
>gi|194889982|ref|XP_001977205.1| GG18899 [Drosophila erecta]
gi|190648854|gb|EDV46132.1| GG18899 [Drosophila erecta]
Length = 568
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 199/454 (43%), Gaps = 82/454 (18%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 55 NQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 114
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y + TNA + I E ++ + S
Sbjct: 115 HRKENV-GSLEKSITIYGNPENCTNACKR-------------------ILEVMQQEALST 154
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 155 NKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVK 212
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-- 253
G L +N SR+++ +++ + S+ + + P + G+ P+
Sbjct: 213 G---------------LIENMSRAENQISTKLRQSYENDLQAMAPQSLM-FPGLHPMAMM 256
Query: 254 -GPYGGYKGDTAGDW----SRSLYSAPR--------DDLSSKEFSLRLVCPVANIGGVIG 300
P G +T+ + S ++ P +DL + L P +G +IG
Sbjct: 257 STPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTY---LYIPNNAVGAIIG 313
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
G+ I I + S A++K+ + + D L + ++ T+ T E + Q EK
Sbjct: 314 TKGSHIRSIMRFSNASLKI--APLDADKPLDQQTERKV---TIVGTPEGQWKAQFMIFEK 368
Query: 361 IERDSGL------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ R+ G + T LLV +S++G +IGKGG + E++R+T + I+ LP+ L
Sbjct: 369 M-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPP 426
Query: 415 ASEDDEM-VQISGDLDLAKDALIQVMTRLRANLF 447
+ D+E V I G + A R+RA +
Sbjct: 427 SGGDEETPVHIIGPFYSVQSA----QRRIRAMML 456
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 296 QETTYLYI-PNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 354
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A F + +++ E G +D ++T +LLV S Q+G +
Sbjct: 355 PEG-------------QWKAQFMIFEKMREEGFMCGTDDV----RLTVELLVASSQVGRI 397
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLH 213
IGKGGQ V+ ++ TG+ I++ + P + V I G V+ A +I A L
Sbjct: 398 IGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSAQRRIRAMMLS 457
Query: 214 DNP 216
NP
Sbjct: 458 TNP 460
>gi|302766557|ref|XP_002966699.1| hypothetical protein SELMODRAFT_85231 [Selaginella moellendorffii]
gi|300166119|gb|EFJ32726.1| hypothetical protein SELMODRAFT_85231 [Selaginella moellendorffii]
Length = 324
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 146/347 (42%), Gaps = 82/347 (23%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVY-S 94
G T R+L GS+IG+GG + + + ++I++ E PG+ +RV + S
Sbjct: 11 GETTTNLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSGS 70
Query: 95 ASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+D AF+ +I ++ D++ D + KLLVP G +
Sbjct: 71 LADVLTAFQ-------------------LIISKIIKDDNQDDTKSIQVKLLVPKTVCGAI 111
Query: 155 IGKGGQIVQNIRSETGAQIRI-LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
IGKGG ++ ++ A I++ +D+ LP D +V I G + KA+ I ++L
Sbjct: 112 IGKGGSNIKKFVEDSQASIKLSSQDQLLPGVI---DRIVTIGGNVDQIIKAVTLILTKLT 168
Query: 214 DNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDW-SRSLY 272
+ S ++ T +TP+V Y G + R +Y
Sbjct: 169 EESSYTE--------------------TTSTPLV-----------YPGTRPTSFIVRCVY 197
Query: 273 SA----------------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA 316
A P + + S+ + P +IG ++G+ G + +++Q SGA
Sbjct: 198 HASPGLQNLRRNGPGPPMPVAYVGALTSSVTIGIPDEHIGFILGRAGKTLQELQQSSGAK 257
Query: 317 IKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIER 363
IKV S GD V+ E+ + T+ + EA+ Q ++K+++
Sbjct: 258 IKV---SDRGD----FVTGTEYRKVTMIGSGEAIQAAQFLLTQKVQQ 297
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 24/167 (14%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT-- 342
+LR + G VIGKGG+ I+ + +SGA I++ + E+F T
Sbjct: 16 NLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRN-------------HEYFPGTSD 62
Query: 343 ----LSATIEAVVRLQPRCSEKIERDSG---LISFTTRLLVPTSRIGCLIGKGGSIITEM 395
LS ++ V+ KI +D S +LLVP + G +IGKGGS I +
Sbjct: 63 RVAVLSGSLADVLTAFQLIISKIIKDDNQDDTKSIQVKLLVPKTVCGAIIGKGGSNIKKF 122
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
++A+I++ ++ L + D +V I G++D A+ ++T+L
Sbjct: 123 VEDSQASIKLSSQDQL--LPGVIDRIVTIGGNVDQIIKAVTLILTKL 167
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCA 185
E E++ G + LV + G VIGKGG + + ++++GA+I++ ++ E+ P
Sbjct: 2 EFLFAENNAGETTTNLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGT- 60
Query: 186 LRSDELVQISGEASVVKKALCQIASRL 212
SD + +SG + V A I S++
Sbjct: 61 --SDRVAVLSGSLADVLTAFQLIISKI 85
>gi|426227473|ref|XP_004007842.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 2 [Ovis aries]
Length = 441
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 151/326 (46%), Gaps = 42/326 (12%)
Query: 132 EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
E + ++ K+L ++ +G +IGK G+ ++ I +T +I I + L +
Sbjct: 130 EQARHTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPERT 187
Query: 192 VQISGEASVVKKALCQIASRL---HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVG 248
+ + G KA +I ++ ++N S +L A I + ++ L PT+ P
Sbjct: 188 ITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMP--- 244
Query: 249 IAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQ 308
T+G S P+ + S+ ++ L P ++G +IGK G I Q
Sbjct: 245 ------------PPTSGPPSAMTPPYPQFEQQSETETVHLFIPALSVGAIIGKQGQHIKQ 292
Query: 309 IRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL- 367
+ + +GA+IK+ + E D + + ++ EA + Q R KI+ ++ +
Sbjct: 293 LSRFAGASIKI--APAEAPDAKVRMV-------IITGPPEAQFKAQGRIYGKIKEENFVS 343
Query: 368 ----ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MV 422
+ + VP+ G +IGKGG + E++ L+ A + ++P++ P E+D+ +V
Sbjct: 344 PKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP---DENDQVVV 399
Query: 423 QISGDL---DLAKDALIQVMTRLRAN 445
+I+G +A+ + +++T+++ +
Sbjct: 400 KITGHFYACQVAQRKIQEILTQVKQH 425
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 42/179 (23%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTV-------Y 93
+TV+ ++ P +G+IIG+ G+ +KQL + I+I P ++ R+V + +
Sbjct: 268 ETVHLFI-PALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQF 326
Query: 94 SASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGC 153
A + FVSP ++ + H R VPS G
Sbjct: 327 KAQGRIYGKIKEENFVSPKEEVKLEAHIR-----------------------VPSFAAGR 363
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKALCQIASR 211
VIGKGG+ V +++ + A++ + +D+ +D+ +V+I+G CQ+A R
Sbjct: 364 VIGKGGKTVNELQNLSSAEVVVPRDQ----TPDENDQVVVKITGHFYA-----CQVAQR 413
>gi|30354044|gb|AAH51679.1| Insulin-like growth factor 2 mRNA binding protein 1 [Mus musculus]
Length = 577
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 175/391 (44%), Gaps = 55/391 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S +
Sbjct: 193 PVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
++ K+ ++ +E + + +DG V K+L ++ +G +IGK
Sbjct: 253 CSS--------------ACKMILEIMHKEAKDTKTADG---VPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
G+ ++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 296 GRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE-- 349
Query: 217 SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
++ +A+ SH G + AA + + P A +S S AP
Sbjct: 350 -AYENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPE 404
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
++ +++ P +G +IGK G I Q+ + + A+IK+ T + V
Sbjct: 405 QEM------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVV--- 455
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSI 391
++ EA + Q R K++ ++ + T + VP S G +IGKGG
Sbjct: 456 ------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKT 509
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+ E++ LT A + ++P++ P E+D+++
Sbjct: 510 VNELQNLTAAEV-VVPRDQTP---DENDQVI 536
>gi|17530887|ref|NP_511111.1| IGF-II mRNA-binding protein, isoform A [Drosophila melanogaster]
gi|24641108|ref|NP_727456.1| IGF-II mRNA-binding protein, isoform B [Drosophila melanogaster]
gi|24641110|ref|NP_727457.1| IGF-II mRNA-binding protein, isoform C [Drosophila melanogaster]
gi|7533029|gb|AAF63331.1|AF241237_1 IGF-II mRNA-binding protein [Drosophila melanogaster]
gi|17862978|gb|AAL39966.1| SD07045p [Drosophila melanogaster]
gi|22832057|gb|AAF47958.2| IGF-II mRNA-binding protein, isoform A [Drosophila melanogaster]
gi|22832058|gb|AAN09274.1| IGF-II mRNA-binding protein, isoform B [Drosophila melanogaster]
gi|22832059|gb|AAN09275.1| IGF-II mRNA-binding protein, isoform C [Drosophila melanogaster]
gi|220947510|gb|ACL86298.1| Imp-PA [synthetic construct]
gi|220956906|gb|ACL90996.1| Imp-PA [synthetic construct]
Length = 566
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 189/426 (44%), Gaps = 77/426 (18%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 54 NQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 113
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y + TNA + I E ++ + S
Sbjct: 114 HRKENV-GSLEKSITIYGNPENCTNACKR-------------------ILEVMQQEAIST 153
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 154 NKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVK 211
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-- 253
G L +N SR+++ +++ + S+ + + P + G+ P+
Sbjct: 212 G---------------LIENMSRAENQISTKLRQSYENDLQAMAPQSLM-FPGLHPMAMM 255
Query: 254 -GPYGGYKGDTAGDW----SRSLYSAPR--------DDLSSKEFSLRLVCPVANIGGVIG 300
P G +T+ + S ++ P +DL + L P +G +IG
Sbjct: 256 STPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTY---LYIPNNAVGAIIG 312
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
G+ I I + S A++K+ + + D L + ++ T+ T E + Q EK
Sbjct: 313 TRGSHIRSIMRFSNASLKI--APLDADKPLDQQTERKV---TIVGTPEGQWKAQYMIFEK 367
Query: 361 IERDSGL------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ R+ G + T LLV +S++G +IGKGG + E++R+T + I+ LP+ L
Sbjct: 368 M-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPP 425
Query: 415 ASEDDE 420
+ D+E
Sbjct: 426 SGGDEE 431
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 295 QETTYLYI-PNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 353
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E G +D ++T +LLV S Q+G +
Sbjct: 354 PEG-------------QWKAQYMIFEKMREEGFMCGTDDV----RLTVELLVASSQVGRI 396
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLH 213
IGKGGQ V+ ++ TG+ I++ + P + V I G V+ A +I A L
Sbjct: 397 IGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLS 456
Query: 214 DNP 216
NP
Sbjct: 457 TNP 459
>gi|410900025|ref|XP_003963497.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 318
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 139/312 (44%), Gaps = 60/312 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTT-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
++FK +I E+L D + + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------SIFKAFSMII-EKLEEDISTSMTNSTATSKPPVTIRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR GAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESAGAQVQVAGD-MLPNSTERA---ITIAGTPQSIIECVKQICVVMLESPPK 172
Query: 219 SQHLLASAISNSHSSSGSLV----GPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
I SGS V G A + G + + D ++ +
Sbjct: 173 -----GVTIPYRPKPSGSPVIFAGGQAYA--------VQGQHAIPQPDLTKLHQLAMQQS 219
Query: 275 PRD------------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
P D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 220 PFPIAHSNQGFQAGMDASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP 279
Query: 323 STEGDDCLITVS 334
D +T++
Sbjct: 280 VEGSTDRQVTIT 291
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++++++NS ++S V
Sbjct: 60 TLAGPTTSIFKAFSMIIEKLEED-------ISTSMTNSTATSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
++RLV P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TIRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 AGAQVQV 133
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + + + + F+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTSIFK-AF 72
Query: 344 SATIEAVVRLQPRCSEKIERDSGLIS--FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
S IE +L+ S + + T RL+VP S+ G LIGKGG I E+R A
Sbjct: 73 SMIIE---KLEEDISTSMTNSTATSKPPVTIRLVVPASQCGSLIGKGGCKIKEIRESAGA 129
Query: 402 NIRI 405
+++
Sbjct: 130 QVQV 133
>gi|326500580|dbj|BAK06379.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 471
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 144/335 (42%), Gaps = 70/335 (20%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P +V+R + K+G +IGR GE++K+L T++++R+ + G R+V + SA++ET
Sbjct: 91 PGASVFRLVVAGDKVGGLIGRRGEVIKRLCEVTRARVRVLDPTDGVSSRIVLI-SATEET 149
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDS-----DGGHQVTAKLLVPSDQIGCV 154
A ++PA DA ++ V ++ G G +A+LLVP Q +
Sbjct: 150 QAE------LAPAMDAAVRIFKHV--NDIEGINPDFTLPVSGPEICSARLLVPKAQGRHL 201
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI------ 208
IGK G +Q ++ TG IRI+ + L S + + +V+I G + V AL +
Sbjct: 202 IGKQGTTIQLMQESTGTTIRIIDKDELLSNQMVEERIVEIRGASLKVLNALKSVLGLLRR 261
Query: 209 ----ASRLH------------DNPSR------------SQHLLASAISNSHSSSGSLVGP 240
S LH N S+ +Q LL S + H+ +G
Sbjct: 262 FLVDHSVLHLFERKNEEVAEVQNSSKENQVTNDYALVVNQDLLLSDSRSHHNPNG----- 316
Query: 241 TAATPIVGIAPLMGPYGGYKGDTA--GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGV 298
G Y Y D + +SR + +S ++R+ P A +
Sbjct: 317 -------------GRYLSYGHDPSVCDPYSRDIRRPTVSLISKITQTMRIPLPQAE--EI 361
Query: 299 IGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
IG G I IR SGA + ++ + D+ L+++
Sbjct: 362 IGVRGQTIAHIRSVSGAMVVLEETGNYLDEVLVSI 396
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 7/170 (4%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RLV +GG+IG+ G +I ++ + + A ++V + ++ +S+ E + L+
Sbjct: 96 FRLVVAGDKVGGLIGRRGEVIKRLCEVTRARVRVLDPTDGVSSRIVLISATEETQAELAP 155
Query: 346 TIEAVVRLQPRCS--EKIERD-----SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++A VR+ + E I D SG + RLLVP ++ LIGK G+ I M+
Sbjct: 156 AMDAAVRIFKHVNDIEGINPDFTLPVSGPEICSARLLVPKAQGRHLIGKQGTTIQLMQES 215
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
T IRI+ K+ L ++ +V+I G +AL V+ LR L D
Sbjct: 216 TGTTIRIIDKDELLSNQMVEERIVEIRGASLKVLNALKSVLGLLRRFLVD 265
>gi|410899813|ref|XP_003963391.1| PREDICTED: poly(rC)-binding protein 4-like [Takifugu rubripes]
Length = 447
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 141/320 (44%), Gaps = 52/320 (16%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R ++ +++ I E GS ER++T+ ++D F
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKRIREESSARVNISE---GSCPERIITITGSTD--CVFRA 73
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
K+ + + A G + VT +L++P+ Q G +IGKGG ++
Sbjct: 74 FTMIT-------HKLEEDLAALVANGTISTK--PPVTLRLVIPASQCGSLIGKGGAKIKE 124
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLA 224
IR TGAQI++ D LP+ R V ISG V + + I + + ++P + +
Sbjct: 125 IRESTGAQIQVAGD-LLPNSTERG---VTISGNQDSVIQCVKLICTVILESPPKGATI-- 178
Query: 225 SAISNSHSSSGSLVGPT--------AATPIVGIA----------PLMGPYGGYKGDTAGD 266
S S + L+ A P+ +A L YG + A
Sbjct: 179 -PYRPSPSPAAVLIAGNQLFDASEFATHPMYSVAQGGLDLQQAYTLQNQYGIPHSELAKL 237
Query: 267 WSRSLYSA------------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
S+ P S+ + S L+ P IG +IG+ G IN+IRQ SG
Sbjct: 238 HQLSMQQGLNPIAQPASTVIPAGMDSNSQTSQELLIPNDLIGSIIGRQGTKINEIRQVSG 297
Query: 315 AAIKVDSSSTEGDDCLITVS 334
A IK+ S D +T++
Sbjct: 298 AQIKIGSQLDGTSDRHVTIT 317
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 30/166 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
+LRL+ +G +IGK G + +IR+ES A + + S + +IT++
Sbjct: 16 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEGSC--PERIITIT--------- 64
Query: 344 SATIEAVVRLQPRCSEKIERD------SGLIS----FTTRLLVPTSRIGCLIGKGGSIIT 393
+ + V R + K+E D +G IS T RL++P S+ G LIGKGG+ I
Sbjct: 65 -GSTDCVFRAFTMITHKLEEDLAALVANGTISTKPPVTLRLVIPASQCGSLIGKGGAKIK 123
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVM 439
E+R T A I++ + LP + + V ISG+ +D++IQ +
Sbjct: 124 EIRESTGAQIQVA-GDLLP---NSTERGVTISGN----QDSVIQCV 161
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 60/183 (32%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
G +T +LL+ ++G +IGK G+ V+ IR E+ A++ I + SC R ++ I+G
Sbjct: 13 GVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEG----SCPER---IITITG 65
Query: 197 EASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY 256
V +A I +L ++ LA+ ++N G + P V
Sbjct: 66 STDCVFRAFTMITHKLEED-------LAALVAN---------GTISTKPPV--------- 100
Query: 257 GGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA 316
+LRLV P + G +IGKGGA I +IR+ +GA
Sbjct: 101 ----------------------------TLRLVIPASQCGSLIGKGGAKIKEIRESTGAQ 132
Query: 317 IKV 319
I+V
Sbjct: 133 IQV 135
>gi|324505572|gb|ADY42393.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
Length = 415
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 138/323 (42%), Gaps = 43/323 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSE--ERVVTVYSASDETNAFE 103
R L P R G++IG+GGE +K+LR + + + T+P S+ ER+VT+ + D N
Sbjct: 108 RLLVPSRGAGAVIGKGGESIKRLRAECDATL----TIPDSQTPERIVTIVAEID--NVIR 161
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ + P D K D D++ + +LLV G +IG+GG ++
Sbjct: 162 CVNEII-PRLDECLKTRD--------SDDEGSARGESELRLLVHQSHAGAIIGRGGYRIK 212
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD----NPSRS 219
+R ET Q+++ C ++ ++QI G + + I + L + PSR
Sbjct: 213 ELREETSTQLKVYSQ----CCPQSTERVIQIIGVPEKIIACVILIINMLKEIPIKGPSRP 268
Query: 220 QHLLASAISNSHSSSG----------SLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + H G G + AP PYGG +G G S
Sbjct: 269 YESMFYDPNFVHEYGGFPPDRNYRGMGPRGGMYGGGLPPRAPRF-PYGG-RGMGMG-VSP 325
Query: 270 SLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDC 329
+ + + + ++ P G +IGKGG IN+IR+ESGA I V+ +
Sbjct: 326 FPPAPFGGPMQTTQVTI----PNELGGTIIGKGGERINRIREESGAHIVVEPQQPNSER- 380
Query: 330 LITVSSKEFFEDTLSATIEAVVR 352
+IT+S T ++ VR
Sbjct: 381 IITISGSHAQIQTAQYLLQQCVR 403
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
++ L++ ++ LRL+ P G VIGKGG I ++R E A + + S T + ++T+ +
Sbjct: 97 QEALAAGKYELRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDSQT--PERIVTIVA 154
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT--RLLVPTSRIGCLIGKGGSIIT 393
+ ++ + E + RL + D G + RLLV S G +IG+GG I
Sbjct: 155 E--IDNVIRCVNEIIPRLDECLKTRDSDDEGSARGESELRLLVHQSHAGAIIGRGGYRIK 212
Query: 394 EMRRLTKANIRI 405
E+R T +++
Sbjct: 213 ELREETSTQLKV 224
>gi|61557337|ref|NP_001013241.1| poly(rC)-binding protein 2 [Rattus norvegicus]
gi|193083108|ref|NP_001122383.1| poly(rC)-binding protein 2 isoform d [Homo sapiens]
gi|6707736|sp|Q15366.1|PCBP2_HUMAN RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E2; Short=hnRNP E2
gi|460773|emb|CAA55015.1| hnRNP-E2 [Homo sapiens]
gi|50926841|gb|AAH78906.1| Poly(rC) binding protein 2 [Rattus norvegicus]
gi|119617116|gb|EAW96710.1| poly(rC) binding protein 2, isoform CRA_e [Homo sapiens]
Length = 365
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 140/351 (39%), Gaps = 91/351 (25%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 175
Query: 212 ------LHDNPSRSQHLLAS----------AISNSHSSSGSLVGPTAATPIVGIAPLMGP 255
PS S + A + S H++ + P P + + G
Sbjct: 176 KGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ 235
Query: 256 YG--------------------------GYKG------DTAGDWSRSLYSAPRDDLSSKE 283
Y G+ G + G W D S++
Sbjct: 236 YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGL--------DASAQT 287
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
S L P IG +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 288 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 338
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 127 ELRGDEDSDGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
E++G D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 274 EVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VE 328
Query: 186 LRSDELVQISGEASVVKKALCQIASRL 212
+D V I+G A+ + A I RL
Sbjct: 329 GSTDRQVTITGSAASISLAQYLINVRL 355
>gi|449265657|gb|EMC76819.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 343
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 37/183 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R ++ ++I I E GS ER+VT+ +D
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GSCPERIVTITGPTD------- 69
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---------VTAKLLVPSDQIGCVI 155
A+FK + L+ +ED + VT +L+VP+ Q G +I
Sbjct: 70 ----------AIFKAFSMI---ALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLI 116
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG ++ IR TGAQ+++ D LP+ R+ V ISG + + + QI + ++
Sbjct: 117 GKGGSKIKEIRESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLES 172
Query: 216 PSR 218
P +
Sbjct: 173 PPK 175
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 34/188 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF---- 339
++RL+ +G +IGK G + ++R+ESGA I + S IT + F
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFKAFS 76
Query: 340 -------EDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
ED ++ + V +P T RL+VP S+ G LIGKGGS I
Sbjct: 77 MIALKFEEDINASMTNSTVTSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 123
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--E 450
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +
Sbjct: 124 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 175
Query: 451 GAVSTFVP 458
GA + P
Sbjct: 176 GATIPYRP 183
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
++GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + SC R +
Sbjct: 9 TEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----SCPER---I 61
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + ++++NS +S V
Sbjct: 62 VTITGPTDAIFKAFSMIALKFEED-------INASMTNSTVTSKPPV------------- 101
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 102 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 128
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 129 STGAQVQV 136
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
+L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 280 ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKI 312
>gi|384947380|gb|AFI37295.1| poly(rC)-binding protein 1 [Macaca mulatta]
Length = 358
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 152/341 (44%), Gaps = 78/341 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 172
Query: 219 S----------QHLLAS--------------AISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + AS A H++ P A I G I+P
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISP 232
Query: 252 L-----------------MGPYGGYKG-DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVA 293
L M G+ G D++ + ++ D S++ S L P
Sbjct: 233 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWAG--LDASAQTTSHELTIPND 290
Query: 294 NIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
IG +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 291 LIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 331
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + +C R ++ ++G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG----NCPER---IITLTGPTN 66
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 67 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 93
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 94 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 62 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I +D V
Sbjct: 275 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVT 329
Query: 194 ISGEASVVKKALCQIASRL 212
I+G A+ + A I RL
Sbjct: 330 ITGSAASISLAQYLINVRL 348
>gi|417410720|gb|JAA51826.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 440
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 143/311 (45%), Gaps = 46/311 (14%)
Query: 40 PEDTV---YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSA 95
PE +V R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+
Sbjct: 49 PELSVTLTLRMLMQGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI--- 102
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVI 155
+ T A ++ FK+ + + + G S VT +L++P+ Q G +I
Sbjct: 103 TGSTAAVFHAVSMIA------FKLDEDLCSAPANGGTVSR--PPVTLRLVIPASQCGSLI 154
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GK G ++ IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++
Sbjct: 155 GKAGTKIKEIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILES 210
Query: 216 PSRSQH------------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDT 263
P + LL++ S V P T + ++ P+
Sbjct: 211 PPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVP 270
Query: 264 AGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
D P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+ + +
Sbjct: 271 GLD--------PGAQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQA 318
Query: 324 TEGDDCLITVS 334
+ +T++
Sbjct: 319 EGAGERHVTIT 329
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 52 SVTLTLRMLMQGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 111
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLIS---FTTRLLVPTSRIGCLIGKGGSIITEMRR 397
+ ++ A + CS + G +S T RL++P S+ G LIGK G+ I E+R
Sbjct: 112 ---AVSMIAFKLDEDLCSAP--ANGGTVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 166
Query: 398 LTKANIRI 405
T A +++
Sbjct: 167 TTGAQVQV 174
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 60/189 (31%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 46 EEEPELSVTLTLRMLMQGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 98
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L SA +N
Sbjct: 99 ITTITGSTAAVFHAVSMIAFKLDED-------LCSAPAN--------------------- 130
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
GG +S +LRLV P + G +IGK G I +IR
Sbjct: 131 ------GG-------------------TVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 165
Query: 311 QESGAAIKV 319
+ +GA ++V
Sbjct: 166 ETTGAQVQV 174
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 364 DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 273 DPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 314
>gi|328709625|ref|XP_001951678.2| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Acyrthosiphon
pisum]
Length = 411
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 30/218 (13%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIVK+ R ++ +KI I + GS ER+VT+ S T A +
Sbjct: 22 KEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTI---SGSTEAIYKAFSLI- 74
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
KV + + + + + G +T +L+VP+ Q G +IGKGG ++ IR TG
Sbjct: 75 -----CTKVEEFIEMQNGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIKEIREATG 129
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------------ 218
AQI++ D LP R+ V ++G + + + I + + ++P +
Sbjct: 130 AQIQVASDV-LPQSTERA---VTLTGTRDSITQCIFHICAVMVESPPKGVTIPYRAKPQM 185
Query: 219 -SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGP 255
+ +LA + + +S+GS G T +VG P P
Sbjct: 186 GAPVILAGGQAFTLASAGSAAGCDVGTMMVGGGPYNAP 223
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 5/132 (3%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+DD S+ +LRL+ +G +IGK G I+ + R+ESGA I + S I+ S+
Sbjct: 6 KDD-SNISLTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTISGST 64
Query: 336 KEFFE--DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ ++ + +E + +Q + G T RL+VP S+ G LIGKGG+ I
Sbjct: 65 EAIYKAFSLICTKVEEFIEMQ--NGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIK 122
Query: 394 EMRRLTKANIRI 405
E+R T A I++
Sbjct: 123 EIREATGAQIQV 134
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 75/187 (40%), Gaps = 58/187 (31%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
D +T +L++ ++G +IGK G+IV+ R E+GA+I I D P + +V I
Sbjct: 8 DSNISLTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDGSCP------ERIVTI 60
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG 254
SG + KA I +++ + G T AT I
Sbjct: 61 SGSTEAIYKAFSLICTKVEEFIEMQN------------------GKTGATAI-------- 94
Query: 255 PYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
G +L RL+ P + G +IGKGG I +IR+ +G
Sbjct: 95 ----------GKCGMTL---------------RLIVPASQCGSLIGKGGNKIKEIREATG 129
Query: 315 AAIKVDS 321
A I+V S
Sbjct: 130 AQIQVAS 136
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
GG Q T ++ VP+D IGC+IGKGG + IR +GA IRI E A +D + I+
Sbjct: 310 GGGQQTHEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSA-STDRTITIT 368
Query: 196 GEASVVKKALCQIASRL 212
G V A I R+
Sbjct: 369 GNPDSVALAQYLINMRI 385
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + VP IGC+IGKGG+ I E+R+++ A IRI E+ AS D + I+G+ D
Sbjct: 315 THEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSAS-TDRTITITGNPD- 372
Query: 431 AKDALIQVMTRLRANL 446
AL Q + +R ++
Sbjct: 373 -SVALAQYLINMRISM 387
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSAS 96
IG R + P + GS+IG+GG +K++R T ++I++ + +P S ER VT+
Sbjct: 94 IGKCGMTLRLIVPASQCGSLIGKGGNKIKEIREATGAQIQVASDVLPQSTERAVTLTGTR 153
Query: 97 D 97
D
Sbjct: 154 D 154
>gi|354490191|ref|XP_003507243.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cricetulus
griseus]
gi|344239259|gb|EGV95362.1| Poly(rC)-binding protein 2 [Cricetulus griseus]
Length = 362
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 140/347 (40%), Gaps = 86/347 (24%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVT 175
Query: 212 --LHDNPSRSQHLLAS----------AISNSHSSSGSLVGPTAATPIVGIAPLMGPYG-- 257
PS S + A + S H++ + P P + + G Y
Sbjct: 176 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP 235
Query: 258 ------------------------GYKG------DTAGDWSRSLYSAPRDDLSSKEFSLR 287
G+ G + G W+ D S++ S
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGL-------DASAQTTSHE 288
Query: 288 LVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
L P IG +IG+ GA IN+IRQ SGA IK + D +T++
Sbjct: 289 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVEGSTDRQVTIT 335
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+ +D V
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANP-----VEGSTDRQVT 333
Query: 194 ISGEASVVKKALCQIASRL 212
I+G A+ + A I RL
Sbjct: 334 ITGSAASISLAQYLINVRL 352
>gi|417410200|gb|JAA51577.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 378
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 141/351 (40%), Gaps = 90/351 (25%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 29 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 78
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 79 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 128
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 129 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 187
Query: 212 ------LHDNPSRSQHLLAS----------AISNSHSSSGSLVGPTAATPIVGIAPLMGP 255
PS S + A + S H++ + P P + + G
Sbjct: 188 KGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ 247
Query: 256 YG--------------------------GYKG------DTAGDWSRSLYSAPRDDLSSKE 283
Y G+ G + G W+ D S++
Sbjct: 248 YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGL-------DASAQT 300
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
S L P IG +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 301 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 351
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 19 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 71
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 72 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 105
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 106 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 138
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 139 TGAQVQV 145
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 73
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 74 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 133
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 134 EIRESTGAQVQV 145
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I +D V
Sbjct: 295 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVT 349
Query: 194 ISGEASVVKKALCQIASRL 212
I+G A+ + A I RL
Sbjct: 350 ITGSAASISLAQYLINVRL 368
>gi|432866565|ref|XP_004070866.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 318
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 138/312 (44%), Gaps = 60/312 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTT-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGD-------EDSDGGHQVTAKLLVPSDQIGCVIGKG 158
++FK +I E+L D + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------SIFKAFSMII-EKLEEDISNSMTNSTATSKPPVTMRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR GAQ+++ D LP+ R+ + ++G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESAGAQVQVAGD-MLPNSTERA---ITVAGTPQSIIECVKQICIVMLESPPK 172
Query: 219 SQHLLASAISNSHSSSGSLV----GPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
I SGS V G A + G + + D ++ +
Sbjct: 173 -----GVTIPYRPKPSGSPVIFAGGQAYA--------VQGQHAIPQPDLTKLHQLAMQQS 219
Query: 275 PRD------------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
P D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 220 PFPIAHSNQGFQAGMDASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP 279
Query: 323 STEGDDCLITVS 334
D +T++
Sbjct: 280 VEGSTDRQVTIT 291
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 46/177 (25%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSA-------- 95
R + P + GS+IG+GG +K++R +++++ G+ +P S ER +TV
Sbjct: 100 MRLVVPASQCGSLIGKGGCKIKEIRESAGAQVQVAGDMLPNSTERAITVAGTPQSIIECV 159
Query: 96 -----------------------SDETNAFEDGDKFVSPAQDA-----LFKVHDRVIAEE 127
S F G + Q A L K+H + +
Sbjct: 160 KQICIVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQS 219
Query: 128 LRGDEDSDGGHQV---------TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
S+ G Q + +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 220 PFPIAHSNQGFQAGMDASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 276
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ISNS ++S + T+ P+
Sbjct: 60 TLAGPTTSIFKAFSMIIEKLEED-----------ISNSMTNSTA----TSKPPV------ 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
++RLV P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TMRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 AGAQVQV 133
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + + + + F+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTSIFK-AF 72
Query: 344 SATIEAVVRLQPRCSEKIERDSGLIS--FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
S IE +L+ S + + T RL+VP S+ G LIGKGG I E+R A
Sbjct: 73 SMIIE---KLEEDISNSMTNSTATSKPPVTMRLVVPASQCGSLIGKGGCKIKEIRESAGA 129
Query: 402 NIRI 405
+++
Sbjct: 130 QVQV 133
>gi|218189965|gb|EEC72392.1| hypothetical protein OsI_05673 [Oryza sativa Indica Group]
gi|222622089|gb|EEE56221.1| hypothetical protein OsJ_05205 [Oryza sativa Japonica Group]
Length = 442
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 91/172 (52%), Gaps = 9/172 (5%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P +V+R + K+G +IGR G+ +K+L DT++++R+ E + + + SA++E+
Sbjct: 94 PGASVFRLVVATDKVGGLIGRRGDTIKRLCEDTRARVRVLEAAAAAAANRIVLISATEES 153
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVI-AEELRGDEDSDGG--HQVTAKLLVPSDQIGCVIG 156
A + PA DA K+ + E++ D+ G + +AKLLVPS Q +IG
Sbjct: 154 QA------ELPPAMDAAIKIFMHINDIEKINCDDTLSGSAPEKCSAKLLVPSAQATHLIG 207
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI 208
K G +++I+ TGA ++I+ L S + + +V I G V AL +
Sbjct: 208 KQGVRIKSIQETTGATVKIIDKVELLSYDVVDERIVDIHGAPLKVLHALKSV 259
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-DSSSTEGDDCLITVSSKEFFEDTLS 344
RLV +GG+IG+ G I ++ +++ A ++V ++++ + ++ +S+ E + L
Sbjct: 99 FRLVVATDKVGGLIGRRGDTIKRLCEDTRARVRVLEAAAAAAANRIVLISATEESQAELP 158
Query: 345 ATIEAVVRLQPRCS--EKIERDSGLI-----SFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
++A +++ + EKI D L + +LLVP+++ LIGK G I ++
Sbjct: 159 PAMDAAIKIFMHINDIEKINCDDTLSGSAPEKCSAKLLVPSAQATHLIGKQGVRIKSIQE 218
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
T A ++I+ K L D+ +V I G AL V+ LR L D G + F
Sbjct: 219 TTGATVKIIDKVELLSYDVVDERIVDIHGAPLKVLHALKSVLGVLRKFLVD-HGVLHLF 276
>gi|1360003|emb|CAA66619.1| nuclear poly(C)-binding protein, splicevariant E [Mus musculus]
Length = 349
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 139/327 (42%), Gaps = 59/327 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVT 175
Query: 212 --LHDNPSRSQHLLAS----------AISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
PS S + A + S H++ + P P + + G Y
Sbjct: 176 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMSLNPDLEGPPLEAYTIQGQYAIP 235
Query: 260 KGDTAGDWSRSLYSA--PRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
+ D ++ + P D S++ S L P IG +I + GA IN
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIRRQGAKIN 295
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITVS 334
+IRQ SGA IK+ + D +T++
Sbjct: 296 EIRQMSGAQIKIANPVEGSTDRQVTIT 322
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+I + G + IR +GAQI+I +D V
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIRRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVT 320
Query: 194 ISGEASVVKKALCQIASRL 212
I+G A+ + A I RL
Sbjct: 321 ITGSAASISLAQYLINVRL 339
>gi|355746831|gb|EHH51445.1| hypothetical protein EGM_10814, partial [Macaca fascicularis]
Length = 542
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 181/412 (43%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+ G+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 136 DFPLRVLVPTQFVGANSGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 195
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+ + +G +IGK G
Sbjct: 196 -------------EAC-----RMILEIMQKEADETKLAEEIPLKIFAHNGLVGRLIGKEG 237
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 238 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 295
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 296 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPH 355
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 356 HQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 413
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
SK ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 414 V-----SKRMV--IITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 466
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 467 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 514
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE V P + +G+IIG+ G +KQL + I+I P +R+V + + E
Sbjct: 368 PEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSKRMVII-TGPPE 426
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 427 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 471
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 472 GKTVNELQNLTSAEVIVPRDQ 492
>gi|14141168|ref|NP_005007.2| poly(rC)-binding protein 2 isoform a [Homo sapiens]
gi|47940610|gb|AAH71942.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|119617115|gb|EAW96709.1| poly(rC) binding protein 2, isoform CRA_d [Homo sapiens]
Length = 366
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 141/351 (40%), Gaps = 90/351 (25%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 175
Query: 212 ------LHDNPSRSQHLLAS----------AISNSHSSSGSLVGPTAATPIVGIAPLMGP 255
PS S + A + S H++ + P P + + G
Sbjct: 176 KGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ 235
Query: 256 YG--------------------------GYKG------DTAGDWSRSLYSAPRDDLSSKE 283
Y G+ G + G W+ D S++
Sbjct: 236 YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGL-------DASAQT 288
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
S L P IG +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 289 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 339
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I +D V
Sbjct: 283 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVT 337
Query: 194 ISGEASVVKKALCQIASRL 212
I+G A+ + A I RL
Sbjct: 338 ITGSAASISLAQYLINVRL 356
>gi|195394077|ref|XP_002055672.1| GJ18657 [Drosophila virilis]
gi|194150182|gb|EDW65873.1| GJ18657 [Drosophila virilis]
Length = 650
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 189/426 (44%), Gaps = 77/426 (18%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 119 NQRRSIRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 178
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y + TNA + I E ++ + S
Sbjct: 179 HRKENV-GSLEKSITIYGNPENCTNAC-------------------KRILEVMQQEALST 218
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 219 NKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVK 276
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-- 253
G L +N SR+++ +++ + S+ + + P + G+ P+
Sbjct: 277 G---------------LIENMSRAENQISTKLRQSYENDLQAMAPQSLM-FPGLHPMAMM 320
Query: 254 -GPYGGYKGDTAGDW----SRSLYSAPR--------DDLSSKEFSLRLVCPVANIGGVIG 300
P G +T+ + S ++ P +D+ + L P +G +IG
Sbjct: 321 STPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPAFPNDMQETTY---LYIPNNAVGAIIG 377
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
G+ I I + S A++K+ + + D L + ++ T+ T E + Q EK
Sbjct: 378 TKGSHIRSIMRFSSASLKI--APLDADKPLDQQTERKV---TIVGTPEGQWKAQYMIFEK 432
Query: 361 IERDSGL------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ R+ G + T LLV +S++G +IGKGG + E++R+T + I+ LP+ L
Sbjct: 433 M-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPP 490
Query: 415 ASEDDE 420
+ D+E
Sbjct: 491 SGGDEE 496
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 360 QETTYLYI-PNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVGT 418
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E G +D ++T +LLV S Q+G +
Sbjct: 419 PEG-------------QWKAQYMIFEKMREEGFMCGTDDV----RLTVELLVASSQVGRI 461
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLH 213
IGKGGQ V+ ++ TG+ I++ + P + V I G V+ A +I A L
Sbjct: 462 IGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSAQRRIRAMMLS 521
Query: 214 DNP 216
NP
Sbjct: 522 TNP 524
>gi|116007842|ref|NP_001036619.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
gi|113194920|gb|ABI31266.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
Length = 539
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 133/304 (43%), Gaps = 53/304 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETNAFED 104
R + +++GSIIG+ GEIV + R ++ +KI I + + P ER+VTV S TNA
Sbjct: 27 RLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTV---SGTTNAIFS 80
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ + + D G Q+ +L+VP+ Q G +IGK G ++
Sbjct: 81 AFTLITKKFEEWCSQFN---------DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKE 131
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL-- 222
IR TG I++ E LP+ R+ V +SG A + + + QI + ++P R +
Sbjct: 132 IRQTTGCSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESPPRGATIPY 187
Query: 223 ---------LASAISNSHSSSGSLVGPT---AATP----IVGIAPLMGP--YGGYK---- 260
+ A + + G+ PT A P M P GG
Sbjct: 188 RPKPQVTGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAA 247
Query: 261 -GDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN--IGGVIGKGGAIINQIRQESGAAI 317
AG R+ A R E + V+N IG +IGKGG I +IRQ SGA I
Sbjct: 248 LAALAGSQLRTANPANRAQQQQHEMT------VSNDLIGCIIGKGGTKIAEIRQISGAMI 301
Query: 318 KVDS 321
++ +
Sbjct: 302 RISN 305
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S ++ ++ F
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIF- 79
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTT---RLLVPTSRIGCLIGKGGSIITEMRR 397
SA + + CS+ D G + T RL+VP S+ G LIGK GS I E+R+
Sbjct: 80 ---SAFTLITKKFEEWCSQF--NDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
T +I++ E LP + + V +SG + + Q+
Sbjct: 135 TTGCSIQVA-SEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ V IGC+IGKGG+ I E+R+++ A IRI E + D + ISG+ D
Sbjct: 272 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSVAL 329
Query: 434 A--LIQVMTRL-RANLFDR 449
A LI + L +ANL ++
Sbjct: 330 AQYLINMSVELQKANLLEQ 348
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
+LR ++ Q ++ V +D IGC+IGKGG + IR +GA IRI E
Sbjct: 255 QLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGG-- 312
Query: 187 RSDELVQISGEASVVKKALCQ 207
+D + ISG V AL Q
Sbjct: 313 NTDRTITISGNPDSV--ALAQ 331
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV R E+GA+I I D P + +V +SG +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTN 76
Query: 200 VVKKALCQIASRLHD 214
+ A I + +
Sbjct: 77 AIFSAFTLITKKFEE 91
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSAS 96
+G R + P + GS+IG+ G +K++R T I++ E +P S ER VT+ ++
Sbjct: 102 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 161
Query: 97 DE 98
++
Sbjct: 162 EQ 163
>gi|345780248|ref|XP_003431966.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Canis lupus familiaris]
Length = 441
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 149/319 (46%), Gaps = 42/319 (13%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
++ K+L ++ +G +IGK G+ ++ I +T +I I + L + + + G
Sbjct: 137 EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNV 194
Query: 199 SVVKKALCQIASRL---HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGP 255
KA +I ++ ++N S +L A I + ++ L PT+ P
Sbjct: 195 ETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMP---------- 244
Query: 256 YGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGA 315
T+G S P+ + + + ++ L P ++G +IGK G I Q+ + +GA
Sbjct: 245 -----PPTSGPPSAMTPPYPQFEQAPQTETVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 299
Query: 316 AIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISF 370
+IK+ + E D + + ++ EA + Q R KI+ ++ + +
Sbjct: 300 SIKI--APAEAPDAKVRMV-------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKL 350
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL- 428
+ VP+ G +IGKGG + E++ L+ A + ++P++ P E+D+ +V+I+G
Sbjct: 351 EAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFY 406
Query: 429 --DLAKDALIQVMTRLRAN 445
+A+ + +++T+++ +
Sbjct: 407 ACQVAQRKIQEILTQVKQH 425
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 41/186 (22%)
Query: 35 QFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTV- 92
QF P+ P +G+IIG+ G+ +KQL + I+I P ++ R+V +
Sbjct: 260 QFEQAPQTETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIIT 319
Query: 93 ------YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+ A + FVSP ++ + H R V
Sbjct: 320 GPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIR-----------------------V 356
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKAL 205
PS G VIGKGG+ V +++ + A++ + +D+ +D+ +V+I+G
Sbjct: 357 PSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQ----TPDENDQVVVKITGHFYA----- 407
Query: 206 CQIASR 211
CQ+A R
Sbjct: 408 CQVAQR 413
>gi|348502908|ref|XP_003439009.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 324
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 143/317 (45%), Gaps = 64/317 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTT-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
++FK +I E+L D + + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------SIFKAFSMII-EKLEEDISTSMTNSTATSKPPVTMRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR GAQ+++ D LP+ R+ + ++G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESAGAQVQVAGD-MLPNSTERA---ITVAGTPQSIIECVKQICIVMLESPPK 172
Query: 219 SQHL----------------LASAISNSHSSSGSLV--GPTAATPIVGIAPLMGPY---G 257
+ A A+ H+ V GP+ T + +A P+
Sbjct: 173 GVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDVSEGPS-LTKLHQLAMQQSPFPIAH 231
Query: 258 GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAI 317
+G AG D S++ S L P IG +IG+ GA IN+IRQ SGA I
Sbjct: 232 SNQGFQAG-----------MDASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQI 280
Query: 318 KVDSSSTEGDDCLITVS 334
K+ + D +T++
Sbjct: 281 KIANPVEGSTDRQVTIT 297
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 86/220 (39%), Gaps = 57/220 (25%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSA-------- 95
R + P + GS+IG+GG +K++R +++++ G+ +P S ER +TV
Sbjct: 100 MRLVVPASQCGSLIGKGGCKIKEIRESAGAQVQVAGDMLPNSTERAITVAGTPQSIIECV 159
Query: 96 -----------------------SDETNAFEDGDKFVSPAQDA-----------LFKVHD 121
S F G + Q A L K+H
Sbjct: 160 KQICIVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDVSEGPSLTKLHQ 219
Query: 122 RVIAEELRGDEDSDGGHQV---------TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQ 172
+ + S+ G Q + +L +P+D IGC+IG+ G + IR +GAQ
Sbjct: 220 LAMQQSPFPIAHSNQGFQAGMDASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQ 279
Query: 173 IRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
I+I +D V I+G + + A I +RL
Sbjct: 280 IKIANP-----VEGSTDRQVTITGSHASISLAEYLINARL 314
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++++++NS ++S V
Sbjct: 60 TLAGPTTSIFKAFSMIIEKLEED-------ISTSMTNSTATSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
++RLV P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TMRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 AGAQVQV 133
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + + + + F+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTSIFK-AF 72
Query: 344 SATIEAVVRLQPRCSEKIERDSGLIS--FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
S IE +L+ S + + T RL+VP S+ G LIGKGG I E+R A
Sbjct: 73 SMIIE---KLEEDISTSMTNSTATSKPPVTMRLVVPASQCGSLIGKGGCKIKEIRESAGA 129
Query: 402 NIRI 405
+++
Sbjct: 130 QVQV 133
>gi|327275834|ref|XP_003222677.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Anolis carolinensis]
Length = 576
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 174/393 (44%), Gaps = 77/393 (19%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++++S +
Sbjct: 193 PVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGK 157
+A ++I E ++ + +D+ +V K+L ++ +G +IGK
Sbjct: 253 CSAA------------------CKMILEIMQKEAKDTKTADEVPLKILAHNNFVGRLIGK 294
Query: 158 GGQIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL--- 212
G+ ++ + +T +I I L+D L + + + G +A +I ++
Sbjct: 295 EGRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGSIENCCRAEQEIMKKVREA 350
Query: 213 HDNP----SRSQHLLA----SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTA 264
++N S HL+ +A+ +SS ++ P ++ + G AP Y +
Sbjct: 351 YENDVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPPPSS--VSGAAP----YSSF----- 399
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
L ++ ++ + P +G +IGK G I Q+ + + A+IK+ + T
Sbjct: 400 --------------LPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPAET 445
Query: 325 EGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTS 379
+ + ++ EA + Q R K++ ++ + T + VP S
Sbjct: 446 PDSKVRMVI---------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPAS 496
Query: 380 RIGCLIGKGGSIITEMRRLTKANIRILPKENLP 412
G +IGKGG + E++ LT A + ++P++ P
Sbjct: 497 AAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP 528
>gi|417410186|gb|JAA51570.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 376
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 134/330 (40%), Gaps = 79/330 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 29 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 78
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 79 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 128
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 129 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 187
Query: 212 ------LHDNPSRSQHLLAS----------AISNSHSSSGSLVGPTAATPIVGIAPLMGP 255
PS S + A + S H++ + P P + + G
Sbjct: 188 KGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ 247
Query: 256 YG--------------------------GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLV 289
Y G+ G + Y A D +S + + L
Sbjct: 248 YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWASLD--ASTQTTHELT 305
Query: 290 CPVANIGGVIGKGGAIINQIRQESGAAIKV 319
P IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 306 IPNNLIGCIIGRQGANINEIRQMSGAQIKI 335
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 19 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 71
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 72 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 105
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 106 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 138
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 139 TGAQVQV 145
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 73
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 74 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 133
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 134 EIRESTGAQVQV 145
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 127 ELRGDEDS-DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
E++G S D Q T +L +P++ IGC+IG+ G + IR +GAQI+I
Sbjct: 286 EVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANP-----VE 340
Query: 186 LRSDELVQISGEASVVKKALCQIASRL 212
S V I+G A+ + A I +RL
Sbjct: 341 GSSGRQVTITGSAASISLAQYLINARL 367
>gi|67971394|dbj|BAE02039.1| unnamed protein product [Macaca fascicularis]
Length = 316
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 151/326 (46%), Gaps = 43/326 (13%)
Query: 132 EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
+D ++ K+L ++ +G +IGK G+ ++ I +T +I I + L +
Sbjct: 6 QDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPERT 63
Query: 192 VQISGEASVVKKALCQIASRL---HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVG 248
+ + G KA +I ++ ++N S +L A I + ++ L PT+ P
Sbjct: 64 ITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMP--- 120
Query: 249 IAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQ 308
T+G S P+ + S E ++ L P ++G +IGK G I Q
Sbjct: 121 ------------PPTSGPPSAMTPPYPQFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQ 167
Query: 309 IRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL- 367
+ + +GA+IK+ + E D + + ++ EA + Q R KI+ ++ +
Sbjct: 168 LSRFAGASIKI--APAEAPDAKVRMV-------IITGPPEAQFKAQGRIYGKIKEENFVS 218
Query: 368 ----ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MV 422
+ + VP+ G +IGKGG + E++ L+ A + ++P++ P E+D+ +V
Sbjct: 219 PKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP---DENDQVVV 274
Query: 423 QISGDL---DLAKDALIQVMTRLRAN 445
+I+G +A+ + +++T+++ +
Sbjct: 275 KITGHFYACQVAQRKIQEILTQVKQH 300
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 42/186 (22%)
Query: 35 QFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTV- 92
QF +TV+ ++ P +G+IIG+ G+ +KQL + I+I P ++ R+V +
Sbjct: 136 QFEQSETETVHLFI-PALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIIT 194
Query: 93 ------YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+ A + FVSP ++ + H R V
Sbjct: 195 GPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIR-----------------------V 231
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKAL 205
PS G VIGKGG+ V +++ + A++ + +D+ +D+ +V+I+G
Sbjct: 232 PSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQ----TPDENDQVVVKITGHFYA----- 282
Query: 206 CQIASR 211
CQ+A R
Sbjct: 283 CQVAQR 288
>gi|444513545|gb|ELV10391.1| Poly(rC)-binding protein 4 [Tupaia chinensis]
Length = 399
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 138/294 (46%), Gaps = 50/294 (17%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCAAPANGSNVSR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS-RSQH- 221
IR TGAQ+++ D LP+ R+ V +SG + + QI + + + S + Q+
Sbjct: 126 EIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILEGFSVQGQYG 181
Query: 222 -LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS 280
+ + ++ SG V P A+ +V P D S
Sbjct: 182 AVTPAEVTKLQQLSGHAV-PFASPSVV---------------------------PGLDPS 213
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
++ S + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T++
Sbjct: 214 TQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 267
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 126/304 (41%), Gaps = 89/304 (29%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L +A +N
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPANG-------------------- 94
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
++S +LRLV P + G +IGK G I +IR
Sbjct: 95 --------------------------SNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QESGAAIKVD----SSSTE------GDDCLITVSSKEFFEDTL----------SATIEAV 350
+ +GA ++V +STE G I + ++ L + T V
Sbjct: 129 ETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILEGFSVQGQYGAVTPAEV 188
Query: 351 VRLQ-------PRCSEKIER--DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
+LQ P S + D + + LVP IGC+IG+ GS I+E+R+++ A
Sbjct: 189 TKLQQLSGHAVPFASPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGA 248
Query: 402 NIRI 405
+I+I
Sbjct: 249 HIKI 252
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 14/170 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGSNVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
T A +++ + LP + + V +SG DA+I + ++ A + +
Sbjct: 131 TGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE 172
>gi|27503479|gb|AAH42440.1| Pcbp3 protein [Mus musculus]
Length = 249
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 62 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 122 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 173
Query: 452 AVSTFVP 458
A + P
Sbjct: 174 ATIPYRP 180
>gi|392573629|gb|EIW66768.1| hypothetical protein TREMEDRAFT_65168 [Tremella mesenterica DSM
1558]
Length = 350
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 132/297 (44%), Gaps = 46/297 (15%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
R L ++ G +IG+GG+ + +R T K + + VPG ++RV +V A D
Sbjct: 27 LRALVSTKEAGILIGKGGQTIADIRAKTNVKAGVSKVVPGVQDRVFSVSGAVDHVA---- 82
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDED---SDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
A F R++ E D G + +LL+ + +G VIG+ G
Sbjct: 83 ----------AAFAEVARLLLETPLSDSSLPPPPVGAFTSVRLLISHNLMGTVIGRSGAK 132
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
++ I+ E+GA++ + E LP ++ +V+I G +K A+ +I L ++ R+
Sbjct: 133 IKQIQDESGARM-VASKEMLPQS---TERVVEIQGSVEAIKTAVLEIGKCLMEDWERNTG 188
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVG---------IAPLMGPYGGYK------GDTAGD 266
+ + +G L G A + G +AP G +GG + +A
Sbjct: 189 TVLYH-PGAAGDAGVLAGGLGAQTVTGGLGGIRRSSVAPSFG-FGGERRMSGRPSISAPS 246
Query: 267 WSRSLYSAPR----DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+R + AP +L ++ S+ P +G +IG+GG I +IR+ SG+ I +
Sbjct: 247 ETRRVSDAPPMVNDPNLRTQNISI----PSDMVGCIIGRGGTKITEIRRLSGSRISI 299
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T + +PSD +GC+IG+GG + IR +G++I I K H + + + I G A
Sbjct: 265 TQNISIPSDMVGCIIGRGGTKITEIRRLSGSRISIAKAPHDET----GERMFTIVGTADA 320
Query: 201 VKKALCQIASRLHDNPSRSQHLLASAISNSH 231
++AL + S+L R +L + + H
Sbjct: 321 TERALMLLYSQLESEKER--RMLQAQMEQVH 349
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 268 SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
++ + S+P + SLR + G +IGKGG I IR ++ V
Sbjct: 9 TQEVSSSPNGHSDEPQLSLRALVSTKEAGILIGKGGQTIADIRAKTNVKAGVSKVVPGVQ 68
Query: 328 DCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLI-----SFTT-RLLVPTSRI 381
D + +VS D ++A V RL E DS L +FT+ RLL+ + +
Sbjct: 69 DRVFSVSGA---VDHVAAAFAEVARL---LLETPLSDSSLPPPPVGAFTSVRLLISHNLM 122
Query: 382 GCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
G +IG+ G+ I +++ + A + + KE LP+ + +V+I G ++ K A++++
Sbjct: 123 GTVIGRSGAKIKQIQDESGARM-VASKEMLPQ---STERVVEIQGSVEAIKTAVLEI 175
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 96/251 (38%), Gaps = 87/251 (34%)
Query: 134 SDGGH----QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSD 189
S GH Q++ + LV + + G +IGKGGQ + +IR++T + + K +P D
Sbjct: 15 SPNGHSDEPQLSLRALVSTKEAGILIGKGGQTIADIRAKTNVKAGVSK--VVPGV---QD 69
Query: 190 ELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGI 249
+ +SG V A ++A L + P +S+S SL P
Sbjct: 70 RVFSVSGAVDHVAAAFAEVARLLLETP----------LSDS-----SLPPP--------- 105
Query: 250 APLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQI 309
P G + S+RL+ +G VIG+ GA I QI
Sbjct: 106 -----PVGAFT------------------------SVRLLISHNLMGTVIGRSGAKIKQI 136
Query: 310 RQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIE----------AVVRLQPRCSE 359
+ ESGA + V+SKE + +E AV+ + E
Sbjct: 137 QDESGARM---------------VASKEMLPQSTERVVEIQGSVEAIKTAVLEIGKCLME 181
Query: 360 KIERDSGLISF 370
ER++G + +
Sbjct: 182 DWERNTGTVLY 192
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + +P+ +GC+IG+GG+ ITE+RRL+ + I I + + M I G D
Sbjct: 265 TQNISIPSDMVGCIIGRGGTKITEIRRLSGSRISIAKAPH----DETGERMFTIVGTADA 320
Query: 431 AKDALIQVMTRLRA 444
+ AL+ + ++L +
Sbjct: 321 TERALMLLYSQLES 334
>gi|410952458|ref|XP_003982897.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 3 [Felis catus]
Length = 441
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 149/319 (46%), Gaps = 42/319 (13%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
++ K+L ++ +G +IGK G+ ++ I +T +I I + L + + + G
Sbjct: 137 EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNV 194
Query: 199 SVVKKALCQIASRL---HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGP 255
KA +I ++ ++N S +L A I + ++ L PT+ P
Sbjct: 195 ETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMP---------- 244
Query: 256 YGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGA 315
T+G S P+ + + + ++ L P ++G +IGK G I Q+ + +GA
Sbjct: 245 -----PPTSGPPSAMTPPYPQFEQAPETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 299
Query: 316 AIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISF 370
+IK+ + E D + + ++ EA + Q R KI+ ++ + +
Sbjct: 300 SIKI--APAEAPDAKVRMV-------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKL 350
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL- 428
+ VP+ G +IGKGG + E++ L+ A + ++P++ P E+D+ +V+I+G
Sbjct: 351 EAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFY 406
Query: 429 --DLAKDALIQVMTRLRAN 445
+A+ + +++T+++ +
Sbjct: 407 ACQVAQRKIQEILTQVKQH 425
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 41/186 (22%)
Query: 35 QFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTV- 92
QF PE P +G+IIG+ G+ +KQL + I+I P ++ R+V +
Sbjct: 260 QFEQAPETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIIT 319
Query: 93 ------YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+ A + FVSP ++ + H R V
Sbjct: 320 GPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIR-----------------------V 356
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKAL 205
PS G VIGKGG+ V +++ + A++ + +D+ +D+ +V+I+G
Sbjct: 357 PSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQ----TPDENDQVVVKITGHFYA----- 407
Query: 206 CQIASR 211
CQ+A R
Sbjct: 408 CQVAQR 413
>gi|395751404|ref|XP_003780598.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2 [Pongo
abelii]
Length = 681
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVP---GSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I+ VP G+ ERV V ++ NA
Sbjct: 136 KELIPSYAAGSIIGKGGQTIVQLQKETGATIKXXXXVPWHTGTTERVCLVQGTAEALNAV 195
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 196 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 252
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P S
Sbjct: 253 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSC 309
Query: 222 L------LASAISNSHSSSGSLVGPTAATP 245
L +A ++NS+ + P P
Sbjct: 310 LNISYANVAGPVANSNPTGSPYASPADVLP 339
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 92/189 (48%), Gaps = 20/189 (10%)
Query: 269 RSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS-----SS 323
S Y+ P + L E+ L+ + P G +IGKGG I Q+++E+GA IK +
Sbjct: 119 HSYYNTP-NFLEEGEYFLKELIPSYAAGSIIGKGGQTIVQLQKETGATIKXXXXVPWHTG 177
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RL 374
T CL+ +++ + + + I VR P+ K E + L TT +L
Sbjct: 178 TTERVCLVQGTAEAL--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKL 235
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
+VP S G +IGKGG+ + + + A +++ K P+ + + +V +SG+ + A
Sbjct: 236 IVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKA 292
Query: 435 LIQVMTRLR 443
+ ++ +++
Sbjct: 293 VSAIVQKVQ 301
>gi|311252459|ref|XP_003125105.1| PREDICTED: poly(rC)-binding protein 1-like [Sus scrofa]
Length = 356
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 143/325 (44%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 172
Query: 219 S----------QHLLAS--------------AISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + AS A H++ P A I G I+P
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGTPLDAYSIQGQHTISP 232
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 233 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNL 290
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 291 IGCIIGRQGANINEIRQMSGAQIKI 315
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + + P + ++ ++G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERIITLTGPTN 66
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 67 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 93
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 94 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 62 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 127 ELRGDEDS-DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
E++G S D Q T +L +P++ IGC+IG+ G + IR +GAQI+I
Sbjct: 266 EVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANP-----VE 320
Query: 186 LRSDELVQISGEASVVKKALCQIASRL 212
S V I+G A+ + A I +RL
Sbjct: 321 GSSGRQVTITGSAASISLAQYLINARL 347
>gi|297735477|emb|CBI17917.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 150/343 (43%), Gaps = 53/343 (15%)
Query: 71 DTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIA-EELR 129
+T+++IR+ + G+ +R+V + + E+ + +SPA DA+ +V RV E
Sbjct: 4 ETRARIRVLDGAVGTSDRIVLI-------SGREEPEAPLSPAMDAVIRVFKRVTGLSESE 56
Query: 130 GDEDSDGGHQV---TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
GD + G V + +LLV S Q +IGK G ++++I+ TGA +R+L + +P A
Sbjct: 57 GDGKAYGAAGVAFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAA 116
Query: 187 RSDELVQISGEASVVKKALCQIASRLHD---------------NPSRSQHLLASAISNS- 230
+ +V++ GEA V+KAL + L N + SQ + ++
Sbjct: 117 ADERIVELQGEALKVQKALEAVVGHLRKFLVDHSVLPLFERTYNATISQDRQSDTWADKS 176
Query: 231 --HSSSGSLVGPTAATPI---------------VGIAPLMGPYGGYKGDTAGDWSRSLYS 273
H +S + +G + P G+ P+ G G G + R+
Sbjct: 177 LLHGTSQTGMGSDYSLPAKRESLYLDRETQMEHSGL-PMYGQEHGLSGIRSSGLGRA--G 233
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
AP + + + P++ +IG GGA I IR+ SGA + V S D+ + +
Sbjct: 234 AP----IVTQIAQTMQIPLSYAEDIIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEI 289
Query: 334 SSKEFFEDTLSATIEAVV--RLQPRCSEKIERDSGLISFTTRL 374
T I+ + +P S + DSGL S ++L
Sbjct: 290 KGTSSQVQTAQQLIQEFISNHKEPVPSSYGKMDSGLRSSYSQL 332
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 84/158 (53%), Gaps = 13/158 (8%)
Query: 311 QESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERD------ 364
+E+ A I+V + D ++ +S +E E LS ++AV+R+ R + E +
Sbjct: 3 EETRARIRVLDGAVGTSDRIVLISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGKAY 62
Query: 365 --SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+G+ + RLLV +++ LIGK GS+I ++ T A++R+L + +P A+ D+ +V
Sbjct: 63 GAAGVAFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIV 122
Query: 423 QISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
++ G+ + AL V+ LR L D + +P+F
Sbjct: 123 ELQGEALKVQKALEAVVGHLRKFLVDH-----SVLPLF 155
>gi|395333911|gb|EJF66288.1| hypothetical protein DICSQDRAFT_159257 [Dichomitus squalens
LYAD-421 SS1]
Length = 405
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 115/268 (42%), Gaps = 42/268 (15%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIG+GG V ++R + +++ + E++PG+ ER++ V D A
Sbjct: 115 IIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLD--------------AVSKA 160
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT K ++P+ ++G VIGKGG ++ I+ +GA++
Sbjct: 161 FGLIVRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDASGARLN-A 219
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR---SQHLLASAISNSHSS 233
+ LP R L+ +SG A + A I + L + R S H S S
Sbjct: 220 SEGMLPGSTER---LLSVSGVADAIHIATYYIGNILIEANERMPSSNHSTYRPTSQSRRP 276
Query: 234 S--GSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCP 291
GS P A A PY G P L +++ + P
Sbjct: 277 PYMGSSYVPGYAPAAAAAATAHNPYAG---------------GPPSQLQTQQ----IYIP 317
Query: 292 VANIGGVIGKGGAIINQIRQESGAAIKV 319
+G +IGKGGA IN+IR S + IK+
Sbjct: 318 NDLVGCIIGKGGAKINEIRHMSASQIKI 345
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 37 IIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSA 95
+ G +++ P ++GS+IG+GG +K+++ + +++ E +PGS ER+++V
Sbjct: 178 VPGSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDASGARLNASEGMLPGSTERLLSVSGV 237
Query: 96 SDET--------NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG----------- 136
+D N + ++ + + + ++ + G G
Sbjct: 238 ADAIHIATYYIGNILIEANERMPSSNHSTYRPTSQSRRPPYMGSSYVPGYAPAAAAAATA 297
Query: 137 ---------GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL------ 181
T ++ +P+D +GC+IGKGG + IR + +QI+I++ +
Sbjct: 298 HNPYAGGPPSQLQTQQIYIPNDLVGCIIGKGGAKINEIRHMSASQIKIMEPGAVGVGMNG 357
Query: 182 -PSCALRSDE-LVQISGEASVVKKALCQIASRL 212
P+ A E LV I+G+ + ++ A+ + SRL
Sbjct: 358 APAPAGSEGERLVVITGQPANIQMAVQLLYSRL 390
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 9/109 (8%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IGKGG+ +N+IR++SGA + V S + ++ VS D +S +VR R
Sbjct: 115 IIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGP---LDAVSKAFGLIVR---RI 168
Query: 358 S-EKIERDS--GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
+ E ++ S G + T + ++P SR+G +IGKGG+ I E++ + A +
Sbjct: 169 NDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDASGARL 217
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 59/221 (26%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVS----- 334
S+ +++ + P + +G VIGKGG I +I+ SGA + G + L++VS
Sbjct: 181 SRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDASGARLNASEGMLPGSTERLLSVSGVADA 240
Query: 335 ---SKEFFEDTLSATIEAVVRLQP------RCSEKIERDSGLISF--------------- 370
+ + + L IEA R+ R + + R + S
Sbjct: 241 IHIATYYIGNIL---IEANERMPSSNHSTYRPTSQSRRPPYMGSSYVPGYAPAAAAAATA 297
Query: 371 -------------TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPK-------EN 410
T ++ +P +GC+IGKGG+ I E+R ++ + I+I+
Sbjct: 298 HNPYAGGPPSQLQTQQIYIPNDLVGCIIGKGGAKINEIRHMSASQIKIMEPGAVGVGMNG 357
Query: 411 LPKIA-SEDDEMVQISGDLDLAKDALIQVMTRLRANLFDRE 450
P A SE + +V I+G + A IQ+ +L + ++E
Sbjct: 358 APAPAGSEGERLVVITG-----QPANIQMAVQLLYSRLEQE 393
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
+ + L+ + +IGKGG V IR ++GA R++ E +P R ++ +SG
Sbjct: 100 NIHMRCLIVTQDASIIIGKGGSHVNEIREKSGA--RVMVSESIPGNPER---ILNVSGPL 154
Query: 199 SVVKKALCQIASRLHDNP 216
V KA I R++D P
Sbjct: 155 DAVSKAFGLIVRRINDEP 172
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAK 432
R L+ T +IGKGGS + E+R K+ R++ E++P + ++ +SG LD
Sbjct: 104 RCLIVTQDASIIIGKGGSHVNEIRE--KSGARVMVSESIP---GNPERILNVSGPLDAVS 158
Query: 433 DALIQVMTRLRANLFDR 449
A ++ R+ FD+
Sbjct: 159 KAFGLIVRRINDEPFDK 175
>gi|25012807|gb|AAN71494.1| RE72930p [Drosophila melanogaster]
Length = 580
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 191/426 (44%), Gaps = 70/426 (16%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 61 NQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 120
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y + TNA + + +V + +G E S
Sbjct: 121 HRKENV-GSLEKSITIYGNPENCTNACKR-----------ILEVMQQEAISTNKG-ELSP 167
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 168 ECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVK 225
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-- 253
G L +N SR+++ +++ + S+ + + P + G+ P+
Sbjct: 226 G---------------LIENMSRAENQISTKLRQSYENDLQAIAPQSLM-FPGLHPMAMM 269
Query: 254 -GPYGGYKGDTAGDW----SRSLYSAPR--------DDLSSKEFSLRLVCPVANIGGVIG 300
P G +T+ + S ++ P +DL + L P +G +IG
Sbjct: 270 STPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTY---LYIPNNAVGAIIG 326
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
G+ I I + S A++K+ + + D L + ++ T+ T E + Q EK
Sbjct: 327 TRGSHIRSIMRFSNASLKI--APLDADKPLDQQTERKV---TIVGTPEGQWKAQYMIFEK 381
Query: 361 IERDSGL------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ R+ G + T LLV +S++G +IGKGG + E++R+T + I+ LP+ L
Sbjct: 382 M-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPP 439
Query: 415 ASEDDE 420
+ D+E
Sbjct: 440 SGGDEE 445
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 309 QETTYLYI-PNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 367
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E G +D ++T +LLV S Q+G +
Sbjct: 368 PEG-------------QWKAQYMIFEKMREEGFMCGTDDV----RLTVELLVASSQVGRI 410
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLH 213
IGKGGQ V+ ++ TG+ I++ + P + V I G V+ A +I A L
Sbjct: 411 IGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLS 470
Query: 214 DNP 216
NP
Sbjct: 471 TNP 473
>gi|332256670|ref|XP_003277439.1| PREDICTED: poly(rC)-binding protein 3 [Nomascus leucogenys]
Length = 393
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 204
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 452 AVSTFVP 458
A + P
Sbjct: 206 ATIPYRP 212
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T +L +P+D IGC+IG+ G + IR +GAQI+I + S+ + I+G +
Sbjct: 317 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-----ATEGSSERQITITGTPAN 371
Query: 201 VKKALCQIASRL 212
+ A I +RL
Sbjct: 372 ISLAQYLINARL 383
>gi|119629731|gb|EAX09326.1| poly(rC) binding protein 3, isoform CRA_d [Homo sapiens]
Length = 393
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 204
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 452 AVSTFVP 458
A + P
Sbjct: 206 ATIPYRP 212
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T +L +P+D IGC+IG+ G + IR +GAQI+I + S+ + I+G +
Sbjct: 317 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-----ATEGSSERQITITGTPAN 371
Query: 201 VKKALCQIASRL 212
+ A I +RL
Sbjct: 372 ISLAQYLINARL 383
>gi|355560220|gb|EHH16906.1| hypothetical protein EGK_13160 [Macaca mulatta]
Length = 361
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 62 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 122 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 173
Query: 452 AVSTFVP 458
A + P
Sbjct: 174 ATIPYRP 180
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T +L +P+D IGC+IG+ G + IR +GAQI+I + S+ + I+G +
Sbjct: 285 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-----ATEGSSERQITITGTPAN 339
Query: 201 VKKALCQIASRL 212
+ A I +RL
Sbjct: 340 ISLAQYLINARL 351
>gi|348524725|ref|XP_003449873.1| PREDICTED: RNA-binding protein Nova-1-like [Oreochromis niloticus]
Length = 503
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 20/213 (9%)
Query: 15 QTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKS 74
+T + G KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T +
Sbjct: 45 ETPAEEAGCTKRTNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGA 96
Query: 75 KIRIGET---VPGSEERVVTVYSASDETNAFED--GDKFVSPAQDALFKVHDRVIAEELR 129
I++ ++ PG+ ERV + + N + +K Q A ++ +
Sbjct: 97 TIKLSKSKDFYPGTTERVCLIQGTVEALNGVHNFIAEKVREMPQSAQKPEPVSILQPQTT 156
Query: 130 GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSD 189
+ D AKL+VP+ G +IGKGG V+ + ++GA +++ + P +
Sbjct: 157 VNPD----RVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQE 209
Query: 190 ELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
+V ISGE +KA+ I ++ ++P S L
Sbjct: 210 RVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCL 242
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 41/186 (22%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E+ L+++ P G +IGKGG I Q+++E+GA IK+ SK+F+ T
Sbjct: 64 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS-------------KSKDFYPGT 110
Query: 343 ------LSATIEAV----------VRLQPRCSEKIERDSGLISFTT---------RLLVP 377
+ T+EA+ VR P+ ++K E S L TT +L+VP
Sbjct: 111 TERVCLIQGTVEALNGVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVP 170
Query: 378 TSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQ 437
S G +IGKGG+ + + + A +++ K P+ + + +V ISG+ + + A+
Sbjct: 171 NSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTISGEPEQNRKAVEI 227
Query: 438 VMTRLR 443
++ +++
Sbjct: 228 IVQKIQ 233
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + ++A L E G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 390 ASNGYLNASSPLMASSLLATEKLADGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 449
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I+ R+
Sbjct: 450 RIQISKKGEFIPGTRNRK---VTITGSPAATQAAQYLISQRI 488
>gi|115495373|ref|NP_001069752.1| poly(rC)-binding protein 3 [Bos taurus]
gi|301767382|ref|XP_002919105.1| PREDICTED: poly(rC)-binding protein 3-like [Ailuropoda melanoleuca]
gi|359323604|ref|XP_848733.3| PREDICTED: poly(rC)-binding protein 3 [Canis lupus familiaris]
gi|109659150|gb|AAI18167.1| Poly(rC) binding protein 3 [Bos taurus]
gi|296490840|tpg|DAA32953.1| TPA: poly(rC) binding protein 3 [Bos taurus]
Length = 361
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 62 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 122 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 173
Query: 452 AVSTFVP 458
A + P
Sbjct: 174 ATIPYRP 180
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T +L +P+D IGC+IG+ G + IR +GAQI+I + S+ + I+G +
Sbjct: 285 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-----ATEGSSERQITITGTPAN 339
Query: 201 VKKALCQIASRL 212
+ A I +RL
Sbjct: 340 ISLAQYLINARL 351
>gi|28212254|ref|NP_783184.1| insulin-like growth factor 2 mRNA-binding protein 1 [Rattus
norvegicus]
gi|81866340|sp|Q8CGX0.1|IF2B1_RAT RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=B-actin zipcode-binding protein 1; Short=rZBP-1;
AltName: Full=IGF-II mRNA-binding protein 1; AltName:
Full=VICKZ family member 1
gi|27464838|gb|AAO16210.1| b-actin zipcode binding protein 1 [Rattus norvegicus]
gi|149053959|gb|EDM05776.1| insulin-like growth factor 2, binding protein 1 [Rattus norvegicus]
gi|171846741|gb|AAI61831.1| Insulin-like growth factor 2 mRNA binding protein 1 [Rattus
norvegicus]
Length = 577
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 173/394 (43%), Gaps = 65/394 (16%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
++ + +T +I I L+D L + + + G +A +I ++ ++N
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVREAYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG--PYGGYKGDTAGDWSRSLYS 273
+ L + I + ++ L +++ + + G PYG S
Sbjct: 354 DVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYG------------SFMQ 401
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
AP ++ +++ P +G +IGK G I Q+ + + A+IK+ T + V
Sbjct: 402 APEQEM------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVV 455
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKG 388
++ EA + Q R K++ ++ + T + VP S G +IGKG
Sbjct: 456 ---------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKG 506
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
G + E++ LT A + ++P++ P E+D+++
Sbjct: 507 GKTVNELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|426199945|gb|EKV49869.1| hypothetical protein AGABI2DRAFT_63586 [Agaricus bisporus var.
bisporus H97]
Length = 365
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 118/263 (44%), Gaps = 37/263 (14%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIG+GG V ++R + +++ + E++PG+ ER++ V D A
Sbjct: 78 IIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLD--------------AVSKA 123
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT K ++P+ ++G VIGKGG ++ I+ +GA++
Sbjct: 124 FGLIVRRINDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLN-A 182
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
+ LP R ++ ++G A + A I + L + +Q + S ++++ S
Sbjct: 183 SEGMLPGSTER---VLSVAGVADAIHIATYYIGTILIE----AQERMPSTSNSTYRPSSQ 235
Query: 237 LVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIG 296
PT GG G + Y P + + + ++ P +G
Sbjct: 236 PRRPT--------------QGGGSSYVPGYSHHAPYGPPHNPPQQLQ-TQQIYIPNDLVG 280
Query: 297 GVIGKGGAIINQIRQESGAAIKV 319
+IGKGG+ IN+IR S + IK+
Sbjct: 281 CIIGKGGSKINEIRHMSASQIKI 303
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 95/198 (47%), Gaps = 32/198 (16%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETN--AF 102
+++ P ++GS+IG+GG +K+++ + +K+ E +PGS ERV++V +D + +
Sbjct: 150 KFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVADAIHIATY 209
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGG---------HQV------------- 140
G + AQ+ + + + + GG H
Sbjct: 210 YIGTILIE-AQERMPSTSNSTYRPSSQPRRPTQGGGSSYVPGYSHHAPYGPPHNPPQQLQ 268
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL---PSCALRSDE---LVQI 194
T ++ +P+D +GC+IGKGG + IR + +QI+I++ P+ A E LV I
Sbjct: 269 TQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGATGLGPNGAPGGSEGERLVVI 328
Query: 195 SGEASVVKKALCQIASRL 212
+G+ + ++ A+ + RL
Sbjct: 329 TGQPANIQMAVQLLYHRL 346
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 261 GDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
G + G+ S + + P S +R + + +IGKGG+ +N+IR++SGA + V
Sbjct: 45 GSSYGEASTTASAVP----PSANIHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVS 100
Query: 321 SSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSR 380
S + ++ VS D +S +VR + G + T + ++P SR
Sbjct: 101 ESIPGNPERILNVSGP---LDAVSKAFGLIVRRINDEPFDVPSVPGSRAVTIKFMIPNSR 157
Query: 381 IGCLIGKGGSIITEMRRLTKANI 403
+G +IGKGGS I E++ + A +
Sbjct: 158 MGSVIGKGGSKIKEIQDASGAKL 180
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 52/214 (24%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSS---- 335
S+ +++ + P + +G VIGKGG+ I +I+ SGA + G + +++V+
Sbjct: 144 SRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVADA 203
Query: 336 ---KEFFEDTLSATIEAVVRLQPRCSEKIERDS---------GLISF------------- 370
++ T+ IEA R+ P S R S G S+
Sbjct: 204 IHIATYYIGTI--LIEAQERM-PSTSNSTYRPSSQPRRPTQGGGSSYVPGYSHHAPYGPP 260
Query: 371 --------TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPK------ENLPKIAS 416
T ++ +P +GC+IGKGGS I E+R ++ + I+I+ N S
Sbjct: 261 HNPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGATGLGPNGAPGGS 320
Query: 417 EDDEMVQISGDLDLAKDALIQVMTRLRANLFDRE 450
E + +V I+G + A IQ+ +L + ++E
Sbjct: 321 EGERLVVITG-----QPANIQMAVQLLYHRLEQE 349
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+ + L+ + +IGKGG V IR ++GA R++ E +P R ++ +SG
Sbjct: 64 IHMRCLIVTQDASIIIGKGGSHVNEIREKSGA--RVMVSESIPGNPER---ILNVSGPLD 118
Query: 200 VVKKALCQIASRLHDNP 216
V KA I R++D P
Sbjct: 119 AVSKAFGLIVRRINDEP 135
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAK 432
R L+ T +IGKGGS + E+R K+ R++ E++P + ++ +SG LD
Sbjct: 67 RCLIVTQDASIIIGKGGSHVNEIRE--KSGARVMVSESIP---GNPERILNVSGPLDAVS 121
Query: 433 DALIQVMTRLRANLFD 448
A ++ R+ FD
Sbjct: 122 KAFGLIVRRINDEPFD 137
>gi|409082121|gb|EKM82479.1| hypothetical protein AGABI1DRAFT_33710 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 365
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 118/263 (44%), Gaps = 37/263 (14%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIG+GG V ++R + +++ + E++PG+ ER++ V D A
Sbjct: 78 IIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLD--------------AVSKA 123
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT K ++P+ ++G VIGKGG ++ I+ +GA++
Sbjct: 124 FGLIVRRINDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLN-A 182
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
+ LP R ++ ++G A + A I + L + +Q + S ++++ S
Sbjct: 183 SEGMLPGSTER---VLSVAGVADAIHIATYYIGTILIE----AQERMPSTSNSTYRPSSQ 235
Query: 237 LVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIG 296
PT GG G + Y P + + + ++ P +G
Sbjct: 236 PRRPT--------------QGGGSSYVPGYSHHAPYGPPHNPPQQLQ-TQQIYIPNDLVG 280
Query: 297 GVIGKGGAIINQIRQESGAAIKV 319
+IGKGG+ IN+IR S + IK+
Sbjct: 281 CIIGKGGSKINEIRHMSASQIKI 303
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 95/198 (47%), Gaps = 32/198 (16%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETN--AF 102
+++ P ++GS+IG+GG +K+++ + +K+ E +PGS ERV++V +D + +
Sbjct: 150 KFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVADAIHIATY 209
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGG---------HQV------------- 140
G + AQ+ + + + + GG H
Sbjct: 210 YIGTILIE-AQERMPSTSNSTYRPSSQPRRPTQGGGSSYVPGYSHHAPYGPPHNPPQQLQ 268
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL---PSCALRSDE---LVQI 194
T ++ +P+D +GC+IGKGG + IR + +QI+I++ P+ A E LV I
Sbjct: 269 TQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGATGLGPNGAPGGSEGERLVVI 328
Query: 195 SGEASVVKKALCQIASRL 212
+G+ + ++ A+ + RL
Sbjct: 329 TGQPANIQMAVQLLYHRL 346
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 261 GDTAGD-WSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
GD AG + + +AP S+ +R + + +IGKGG+ +N+IR++SGA + V
Sbjct: 41 GDKAGSSYGEASTTAPAVPPSAN-IHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMV 99
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTS 379
S + ++ VS D +S +VR + G + T + ++P S
Sbjct: 100 SESIPGNPERILNVSGP---LDAVSKAFGLIVRRINDEPFDVPSVPGSRAVTIKFMIPNS 156
Query: 380 RIGCLIGKGGSIITEMRRLTKANI 403
R+G +IGKGGS I E++ + A +
Sbjct: 157 RMGSVIGKGGSKIKEIQDASGAKL 180
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 52/214 (24%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSS---- 335
S+ +++ + P + +G VIGKGG+ I +I+ SGA + G + +++V+
Sbjct: 144 SRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVADA 203
Query: 336 ---KEFFEDTLSATIEAVVRLQPRCSEKIERDS---------GLISF------------- 370
++ T+ IEA R+ P S R S G S+
Sbjct: 204 IHIATYYIGTI--LIEAQERM-PSTSNSTYRPSSQPRRPTQGGGSSYVPGYSHHAPYGPP 260
Query: 371 --------TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPK------ENLPKIAS 416
T ++ +P +GC+IGKGGS I E+R ++ + I+I+ N S
Sbjct: 261 HNPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGATGLGPNGAPGGS 320
Query: 417 EDDEMVQISGDLDLAKDALIQVMTRLRANLFDRE 450
E + +V I+G + A IQ+ +L + ++E
Sbjct: 321 EGERLVVITG-----QPANIQMAVQLLYHRLEQE 349
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+ + L+ + +IGKGG V IR ++GA R++ E +P R ++ +SG
Sbjct: 64 IHMRCLIVTQDASIIIGKGGSHVNEIREKSGA--RVMVSESIPGNPER---ILNVSGPLD 118
Query: 200 VVKKALCQIASRLHDNP 216
V KA I R++D P
Sbjct: 119 AVSKAFGLIVRRINDEP 135
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAK 432
R L+ T +IGKGGS + E+R K+ R++ E++P + ++ +SG LD
Sbjct: 67 RCLIVTQDASIIIGKGGSHVNEIRE--KSGARVMVSESIP---GNPERILNVSGPLDAVS 121
Query: 433 DALIQVMTRLRANLFD 448
A ++ R+ FD
Sbjct: 122 KAFGLIVRRINDEPFD 137
>gi|326934067|ref|XP_003213117.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Meleagris gallopavo]
Length = 553
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 165/382 (43%), Gaps = 55/382 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++++S +
Sbjct: 170 PVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPEG 229
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGK 157
+A ++I E ++ + +D+ +V K+L ++ +G +IGK
Sbjct: 230 CSAA------------------CKMILEIMQKEAKDTKTADEVPLKILAHNNFVGRLIGK 271
Query: 158 GGQIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
G+ ++ + +T +I I L+D L + + + G KA +I ++ +
Sbjct: 272 EGRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGSIENCCKAEQEIMKKVREA 327
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
++ +A+ SH G + P A P +G S + P
Sbjct: 328 ---YENDVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPPP-----SSVSGAAPYSSFMPP 379
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ ++ + P +G +IGK G I Q+ + + A+IK+ T + V
Sbjct: 380 EQE------TVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVV-- 431
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R K++ ++ + T + VP S G +IGKGG
Sbjct: 432 -------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGK 484
Query: 391 IITEMRRLTKANIRILPKENLP 412
+ E++ LT A + ++P++ P
Sbjct: 485 TVNELQNLTAAEV-VVPRDQTP 505
>gi|56566054|gb|AAV98363.1| poly(rC) binding protein 3 [Homo sapiens]
Length = 361
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 34/188 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--E 450
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 172
Query: 451 GAVSTFVP 458
GA + P
Sbjct: 173 GATIPYRP 180
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 285 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 319
>gi|222636947|gb|EEE67079.1| hypothetical protein OsJ_24052 [Oryza sativa Japonica Group]
Length = 544
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 131/289 (45%), Gaps = 42/289 (14%)
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
P S R V S+S E E +SPAQ+AL + D L G+ + G ++T
Sbjct: 54 PASPARRVEASSSSGE--PLE-----LSPAQEALVALLDSGWVVHLNGE--AWGAERMTC 104
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRS---DELVQISGEAS 199
+LV + ++ GKG I+ I +E+GA++R+ A + +E+V+I+G+ +
Sbjct: 105 LVLVEAGRLEAASGKG--ILWTIANESGAEVRVTPWGGEGGAAYAAQPPEEVVEITGDGT 162
Query: 200 VVKKALCQIASRLH-DNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGG 258
V++AL ++S L D P L S+ S +HS + L P P MG
Sbjct: 163 TVRRALVSVSSCLQGDGP------LGSSTS-AHSVNPILTQTFPKVP----EPEMG---S 208
Query: 259 YKGDTAGDWSRSLYSAPRDDLSS-----------KEFSLRLVCPVANIGGVIGKGGAIIN 307
D + + R+ S P D +FS RL+CPV GG+IGK G +I
Sbjct: 209 LYSDMSTE--RANTSIPHIDCPQGATGIEQTECVMQFSFRLLCPVTLAGGLIGKNGMVIK 266
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPR 356
I SGA++ V + ITVS+ E S AV+R+ R
Sbjct: 267 AIEVNSGASVDVGGPVHRCMERAITVSALEKPGQKFSMVENAVLRIFDR 315
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LCP+ G +IG+ G ++K + +++ + + +G V ER +TV +A E
Sbjct: 245 FRLLCPVTLAGGLIGKNGMVIKAIEVNSGASVDVGGPVHRCMERAITV-------SALEK 297
Query: 105 GDKFVSPAQDALFKVHDRV 123
+ S ++A+ ++ DR+
Sbjct: 298 PGQKFSMVENAVLRIFDRM 316
>gi|62858479|ref|NP_001017139.1| insulin-like growth factor 2 mRNA binding protein 3 [Xenopus
(Silurana) tropicalis]
gi|89272857|emb|CAJ82142.1| IGF-II mRNA-binding protein 3 (imp-3) [Xenopus (Silurana)
tropicalis]
Length = 594
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 174/396 (43%), Gaps = 61/396 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNAFED 104
R L P + +G+IIG+ G ++ + T+SKI I + G+ E+ +T++S + +A
Sbjct: 209 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCSA--- 265
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++I E ++ + +D+ ++ K+L ++ +G +IGK G+ ++
Sbjct: 266 ---------------ACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLK 310
Query: 164 NIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPSR 218
I +T +I I L+D L + + + G KA +I ++ ++N
Sbjct: 311 KIEQDTDTKITISPLQDLTL----YNPERTITVKGSIEACAKAEEEIMKKIRESYENDIA 366
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
+ +L A I P +G+ P + S P
Sbjct: 367 AMNLQAHLI------------PGLNLNALGLFPPSSSGMPPPSVGVPSPTTSTSYPPFGQ 414
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
E ++ L P +G +IGK G I Q+ + +GA+IK+ + EG D + +
Sbjct: 415 QPESE-TVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMV---- 467
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + + VP+ G +IGKGG +
Sbjct: 468 ---IITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVN 524
Query: 394 EMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
E++ LT A + ++P++ P E+D+ +V+I+G
Sbjct: 525 ELQNLTSAEV-VVPRDQTP---DENDQVVVKITGHF 556
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 25/145 (17%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P +G+IIG+ G+ +KQL + I+I P ++ R+V + +
Sbjct: 416 PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPE- 474
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIA----EELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
A FK R+ E G ++ ++ A + VPS G V
Sbjct: 475 ----------------AQFKAQGRIYGKLKEENFFGPKEEV---KLEAHIKVPSYAAGRV 515
Query: 155 IGKGGQIVQNIRSETGAQIRILKDE 179
IGKGG+ V +++ T A++ + +D+
Sbjct: 516 IGKGGKTVNELQNLTSAEVVVPRDQ 540
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG-DDCLITVSSKEFFED 341
E LR++ P +G +IGK GA I I +++ + I + G + IT+ S +
Sbjct: 205 EVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHST---PE 261
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTT----RLLVPTSRIGCLIGKGGSIITEMRR 397
SA + ++ + +++++ FT ++L + +G LIGK G + ++ +
Sbjct: 262 GCSAACKIIMEI-------MQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 314
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
T I I P ++L + + + G ++ A ++M ++R
Sbjct: 315 DTDTKITISPLQDL--TLYNPERTITVKGSIEACAKAEEEIMKKIR 358
>gi|390478281|ref|XP_002761548.2| PREDICTED: poly(rC)-binding protein 3 [Callithrix jacchus]
Length = 393
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 204
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 452 AVSTFVP 458
A + P
Sbjct: 206 ATIPYRP 212
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T +L +P+D IGC+IG+ G + IR +GAQI+I + S+ + I+G +
Sbjct: 317 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-----ATEGSSERQITITGTPAN 371
Query: 201 VKKALCQIASRL 212
+ A I +RL
Sbjct: 372 ISLAQYLINARL 383
>gi|410969851|ref|XP_003991405.1| PREDICTED: poly(rC)-binding protein 3 [Felis catus]
Length = 361
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 62 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 122 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 173
Query: 452 AVSTFVP 458
A + P
Sbjct: 174 ATIPYRP 180
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T +L +P+D IGC+IG+ G + IR +GAQI+I + S+ + I+G +
Sbjct: 285 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-----ATEGSSERQITITGTPAN 339
Query: 201 VKKALCQIASRL 212
+ A I +RL
Sbjct: 340 ISLAQYLINARL 351
>gi|345320820|ref|XP_001521752.2| PREDICTED: poly(rC)-binding protein 3-like [Ornithorhynchus
anatinus]
Length = 261
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + +++SNS ++S V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-------IINSMSNSTATSKPPV------------- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 34/188 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSTATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--E 450
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 172
Query: 451 GAVSTFVP 458
GA + P
Sbjct: 173 GATIPYRP 180
>gi|338720838|ref|XP_001488421.3| PREDICTED: poly(rC)-binding protein 3 [Equus caballus]
Length = 393
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 204
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 452 AVSTFVP 458
A + P
Sbjct: 206 ATIPYRP 212
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T +L +P+D IGC+IG+ G + IR +GAQI+I + S+ + I+G +
Sbjct: 317 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-----ATEGSSERQITITGTPAN 371
Query: 201 VKKALCQIASRL 212
+ A I +RL
Sbjct: 372 ISLAQYLINARL 383
>gi|395536909|ref|XP_003770451.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Sarcophilus
harrisii]
Length = 361
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + +++SNS ++S V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-------IINSMSNSTATSKPPV------------- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 42/192 (21%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD--DCLITVS------- 334
++RL+ +G +IGK G + ++R+ESGA I + +EG+ + ++T++
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIF 69
Query: 335 ------SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKG 388
+ +F ED +++ + +P T RL+VP S+ G LIGKG
Sbjct: 70 KAFAMIAYKFEEDIINSMSNSTATSKP-------------PVTLRLVVPASQCGSLIGKG 116
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
GS I E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 117 GSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLE 168
Query: 449 R--EGAVSTFVP 458
+GA + P
Sbjct: 169 SPPKGATIPYRP 180
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 285 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 319
>gi|351714348|gb|EHB17267.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 143/325 (44%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 16 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 65
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 66 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 115
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 116 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 171
Query: 219 S----------QHLLAS--------------AISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + AS A H++ P A I G I+P
Sbjct: 172 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISP 231
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 232 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNL 289
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 290 IGCIIGRQGANINEIRQMSGAQIKI 314
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + +C R ++ ++G +
Sbjct: 13 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG----NCPER---IITLTGPTN 65
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 66 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 92
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 93 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 132
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 13 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 60
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 61 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 120
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 121 EIRESTGAQVQV 132
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 127 ELRGDEDS-DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
E++G S D Q T +L +P++ IGC+IG+ G + IR +GAQI+I
Sbjct: 265 EVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANP-----VE 319
Query: 186 LRSDELVQISGEASVVKKALCQIASRL 212
S V I+G A+ + A I +RL
Sbjct: 320 GSSGRQVTITGSAASISLAQYLINARL 346
>gi|6754994|ref|NP_035995.1| poly(rC)-binding protein 1 [Mus musculus]
gi|62751650|ref|NP_001015565.1| poly(rC)-binding protein 1 [Bos taurus]
gi|126723096|ref|NP_001075593.1| poly(rC)-binding protein 1 [Oryctolagus cuniculus]
gi|222352151|ref|NP_006187.2| poly(rC)-binding protein 1 [Homo sapiens]
gi|379642963|ref|NP_001243850.1| poly(rC)-binding protein 1 [Equus caballus]
gi|114577924|ref|XP_515530.2| PREDICTED: poly(rC)-binding protein 1 isoform 3 [Pan troglodytes]
gi|296223628|ref|XP_002757702.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
gi|297667414|ref|XP_002811975.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Pongo abelii]
gi|301758216|ref|XP_002914950.1| PREDICTED: poly(rC)-binding protein 1-like [Ailuropoda melanoleuca]
gi|332226765|ref|XP_003262561.1| PREDICTED: poly(rC)-binding protein 1 [Nomascus leucogenys]
gi|348566575|ref|XP_003469077.1| PREDICTED: poly(rC)-binding protein 1-like [Cavia porcellus]
gi|354491739|ref|XP_003508012.1| PREDICTED: poly(rC)-binding protein 1-like [Cricetulus griseus]
gi|395731716|ref|XP_003775951.1| PREDICTED: poly(rC)-binding protein 1 isoform 2 [Pongo abelii]
gi|395841306|ref|XP_003793486.1| PREDICTED: poly(rC)-binding protein 1 [Otolemur garnettii]
gi|402891162|ref|XP_003908824.1| PREDICTED: poly(rC)-binding protein 1 [Papio anubis]
gi|410954989|ref|XP_003984141.1| PREDICTED: poly(rC)-binding protein 1 [Felis catus]
gi|426223390|ref|XP_004005858.1| PREDICTED: poly(rC)-binding protein 1 [Ovis aries]
gi|426335835|ref|XP_004029412.1| PREDICTED: poly(rC)-binding protein 1 [Gorilla gorilla gorilla]
gi|12230408|sp|O19048.1|PCBP1_RABIT RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42559420|sp|P60335.1|PCBP1_MOUSE RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42560548|sp|Q15365.2|PCBP1_HUMAN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1; AltName: Full=Nucleic acid-binding
protein SUB2.3
gi|75040221|sp|Q5E9A3.1|PCBP1_BOVIN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1
gi|2134737|pir||S58529 alpha-complex protein 1 - human
gi|5805273|gb|AAD51920.1|AF139894_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|5805275|gb|AAD51921.1|AF139895_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|1215671|gb|AAA91317.1| alpha-CP1 [Homo sapiens]
gi|2644966|emb|CAA05814.1| hnRNP-E1 protein [Oryctolagus cuniculus]
gi|13435897|gb|AAH04793.1| Poly(rC) binding protein 1 [Mus musculus]
gi|24980783|gb|AAH39742.1| Poly(rC) binding protein 1 [Homo sapiens]
gi|47124405|gb|AAH69915.1| Poly(rC) binding protein 1 [Mus musculus]
gi|59858399|gb|AAX09034.1| poly(rC) binding protein 1 [Bos taurus]
gi|62702265|gb|AAX93191.1| unknown [Homo sapiens]
gi|119620240|gb|EAW99834.1| poly(rC) binding protein 1 [Homo sapiens]
gi|148666767|gb|EDK99183.1| mCG130511 [Mus musculus]
gi|189054893|dbj|BAG36897.1| unnamed protein product [Homo sapiens]
gi|208968661|dbj|BAG74169.1| poly(rC) binding protein 1 [synthetic construct]
gi|281346699|gb|EFB22283.1| hypothetical protein PANDA_002891 [Ailuropoda melanoleuca]
gi|296482414|tpg|DAA24529.1| TPA: poly(rC)-binding protein 1 [Bos taurus]
gi|312151908|gb|ADQ32466.1| poly(rC) binding protein 1 [synthetic construct]
gi|344250809|gb|EGW06913.1| Poly(rC)-binding protein 1 [Cricetulus griseus]
gi|355565760|gb|EHH22189.1| hypothetical protein EGK_05412 [Macaca mulatta]
gi|355751386|gb|EHH55641.1| hypothetical protein EGM_04885 [Macaca fascicularis]
gi|380813262|gb|AFE78505.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|380813264|gb|AFE78506.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|383418769|gb|AFH32598.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384940310|gb|AFI33760.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384947378|gb|AFI37294.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|410262902|gb|JAA19417.1| poly(rC) binding protein 1 [Pan troglodytes]
gi|431912608|gb|ELK14626.1| Poly(rC)-binding protein 1 [Pteropus alecto]
gi|444723406|gb|ELW64063.1| Poly(rC)-binding protein 1 [Tupaia chinensis]
Length = 356
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 143/325 (44%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 172
Query: 219 S----------QHLLAS--------------AISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + AS A H++ P A I G I+P
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISP 232
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 233 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNL 290
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 291 IGCIIGRQGANINEIRQMSGAQIKI 315
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + +C R ++ ++G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG----NCPER---IITLTGPTN 66
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 67 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 93
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 94 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 62 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 127 ELRGDEDS-DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
E++G S D Q T +L +P++ IGC+IG+ G + IR +GAQI+I
Sbjct: 266 EVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANP-----VE 320
Query: 186 LRSDELVQISGEASVVKKALCQIASRL 212
S V I+G A+ + A I +RL
Sbjct: 321 GSSGRQVTITGSAASISLAQYLINARL 347
>gi|166796167|gb|AAI59042.1| igf2bp3 protein [Xenopus (Silurana) tropicalis]
Length = 559
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 174/396 (43%), Gaps = 61/396 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNAFED 104
R L P + +G+IIG+ G ++ + T+SKI I + G+ E+ +T++S + +A
Sbjct: 174 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCSAA-- 231
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++I E ++ + +D+ ++ K+L ++ +G +IGK G+ ++
Sbjct: 232 ----------------CKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLK 275
Query: 164 NIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPSR 218
I +T +I I L+D L + + + G KA +I ++ ++N
Sbjct: 276 KIEQDTDTKITISPLQDLTL----YNPERTITVKGSIEACAKAEEEIMKKIRESYENDIA 331
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
+ +L A I P +G+ P + S P
Sbjct: 332 AMNLQAHLI------------PGLNLNALGLFPPSSSGMPPPSVGVPSPTTSTSYPPFGQ 379
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
E ++ L P +G +IGK G I Q+ + +GA+IK+ + EG D + +
Sbjct: 380 QPESE-TVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMV---- 432
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + + VP+ G +IGKGG +
Sbjct: 433 ---IITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVN 489
Query: 394 EMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
E++ LT A + ++P++ P E+D+ +V+I+G
Sbjct: 490 ELQNLTSAEV-VVPRDQTP---DENDQVVVKITGHF 521
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 25/145 (17%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P +G+IIG+ G+ +KQL + I+I P ++ R+V
Sbjct: 381 PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMV-------- 432
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIA----EELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
++ +A FK R+ E G ++ ++ A + VPS G V
Sbjct: 433 ---------IITGPPEAQFKAQGRIYGKLKEENFFGPKEEV---KLEAHIKVPSYAAGRV 480
Query: 155 IGKGGQIVQNIRSETGAQIRILKDE 179
IGKGG+ V +++ T A++ + +D+
Sbjct: 481 IGKGGKTVNELQNLTSAEVVVPRDQ 505
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG-DDCLITVSSKEFFED 341
E LR++ P +G +IGK GA I I +++ + I + G + IT+ S +
Sbjct: 170 EVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHST---PE 226
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTT----RLLVPTSRIGCLIGKGGSIITEMRR 397
SA + ++ + +++++ FT ++L + +G LIGK G + ++ +
Sbjct: 227 GCSAACKIIMEI-------MQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 279
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
T I I P ++L + + + G ++ A ++M ++R
Sbjct: 280 DTDTKITISPLQDL--TLYNPERTITVKGSIEACAKAEEEIMKKIR 323
>gi|395752934|ref|XP_002830848.2| PREDICTED: poly(rC)-binding protein 3 [Pongo abelii]
Length = 432
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 88/168 (52%), Gaps = 17/168 (10%)
Query: 51 IRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVS 110
+ ++GSIIG+ GE VK++R ++ ++I I E ER+VT+ + T+A ++
Sbjct: 52 LWEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI---TGPTDAIFKAFAMIA 106
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+K + +I S VT +L+VP+ Q G +IGKGG ++ IR TG
Sbjct: 107 ------YKFEEDIINSMSNSPATSK--PPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 158
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
AQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 159 AQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 202
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 30/158 (18%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ 354
+G +IGK G + ++R+ESGA I + +EG+ C + T++ +A+ +
Sbjct: 55 VGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TITGPTDAIFKAF 102
Query: 355 PRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIR 404
+ K E D + T RL+VP S+ G LIGKGGS I E+R T A ++
Sbjct: 103 AMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 162
Query: 405 ILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
+ + LP + + V ISG DA+IQ + ++
Sbjct: 163 VA-GDMLP---NSTERAVTISGT----PDAIIQCVKQI 192
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 60/170 (35%)
Query: 150 QIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA 209
++G +IGK G+ V+ +R E+GA+I I + +C R +V I+G + KA IA
Sbjct: 54 EVGSIIGKKGETVKKMREESGARINISEG----NCPER---IVTITGPTDAIFKAFAMIA 106
Query: 210 SRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ ++ I NS S+S P + P V
Sbjct: 107 YKFEED-----------IINSMSNS-----PATSKPPV---------------------- 128
Query: 270 SLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+LRLV P + G +IGKGG+ I +IR+ +GA ++V
Sbjct: 129 ---------------TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 163
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASD 97
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 131 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 183
>gi|351712813|gb|EHB15732.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 143/325 (44%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 16 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 65
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 66 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 115
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 116 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 171
Query: 219 S----------QHLLAS--------------AISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + AS A H++ P A I G I+P
Sbjct: 172 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISP 231
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 232 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNL 289
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 290 IGCIIGRQGANINEIRQMSGAQIKI 314
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + +C R ++ ++G +
Sbjct: 13 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG----NCPER---IITLTGPTN 65
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 66 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 92
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 93 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 132
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 13 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 60
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 61 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 120
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 121 EIRESTGAQVQV 132
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 127 ELRGDEDS-DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
E++G S D Q T +L +P++ IGC+IG+ G + IR +GAQI+I
Sbjct: 265 EVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANP-----VE 319
Query: 186 LRSDELVQISGEASVVKKALCQIASRL 212
S + I+G A+ + A I +RL
Sbjct: 320 GSSGRQITITGSAASISLAQYLINARL 346
>gi|189234912|ref|XP_969611.2| PREDICTED: similar to AGAP004942-PA [Tribolium castaneum]
Length = 446
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 92/174 (52%), Gaps = 32/174 (18%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIVK+ R ++ +KI I + GS ER+VTV +++
Sbjct: 26 KEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTGSTN------------- 69
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQ------VTAKLLVPSDQIGCVIGKGGQIVQN 164
A+FK +I ++ +D + G +T +L+VP+ Q G +IGKGG ++
Sbjct: 70 ----AIFKAFT-LICKKFEEFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSKIKE 124
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
IR TGA I++ E LP+ R+ V ISG + + + I + + ++P +
Sbjct: 125 IREVTGASIQV-ASEMLPNSTERA---VTISGTGEAITQCIYHICTVMLESPPK 174
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 17/171 (9%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+D S+ ++RL+ +G +IGK G I+ + R+ESGA I + S +T S+
Sbjct: 10 NDDSNVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGSTN 69
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSG-----LISFTTRLLVPTSRIGCLIGKGGSI 391
F+ A + + E + +SG T RL+VP S+ G LIGKGGS
Sbjct: 70 AIFK--------AFTLICKKFEEFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSK 121
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
I E+R +T A+I++ E LP + + V ISG + + + T +
Sbjct: 122 IKEIREVTGASIQVA-SEMLP---NSTERAVTISGTGEAITQCIYHICTVM 168
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+ +Q T ++ VP++ IGC+IGKGG + IR +GA IRI + S +D +
Sbjct: 259 NQQNSNQQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDDRESGV--TDRTI 316
Query: 193 QISGEASVVKKALCQ 207
ISG V AL Q
Sbjct: 317 TISGNPDAV--ALAQ 329
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + VP IGC+IGKGG+ I E+R+++ A IRI ++ + + D + ISG+ D
Sbjct: 267 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDD--RESGVTDRTITISGNPDA 324
Query: 431 AKDALIQVMTRLRANL 446
AL Q + + L
Sbjct: 325 V--ALAQYLINMSVEL 338
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+ D +T +L++ ++G +IGK G+IV+ R E+GA+I I D P + +V
Sbjct: 10 NDDSNVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDGSCP------ERIV 62
Query: 193 QISGEASVVKKALCQIASRLHD 214
++G + + KA I + +
Sbjct: 63 TVTGSTNAIFKAFTLICKKFEE 84
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV 92
R + P + GS+IG+GG +K++R T + I++ E +P S ER VT+
Sbjct: 103 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTI 150
>gi|148229933|ref|NP_001086212.1| MGC84166 protein [Xenopus laevis]
gi|49256273|gb|AAH74333.1| MGC84166 protein [Xenopus laevis]
Length = 225
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + +++SNS ++S V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-------IINSMSNSTATSKPPV------------- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 34/188 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSTATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--E 450
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 172
Query: 451 GAVSTFVP 458
GA + P
Sbjct: 173 GATIPYRP 180
>gi|321468687|gb|EFX79671.1| hypothetical protein DAPPUDRAFT_225024 [Daphnia pulex]
Length = 573
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 41/220 (18%)
Query: 17 DYADHGPNKRRYTGD----DRDQFIIGPEDTVY-RYLCPIRKIGSIIGRGGEIVKQLRID 71
D +H KR GD DR + + ++Y + L P G+IIG+GGE + Q++ +
Sbjct: 25 DSPEHSERKRPLDGDSDLSDRKKSHFTGDGSIYLKVLVPSVAAGAIIGKGGETIAQVQKE 84
Query: 72 TKSKIRIGET---VPGSEERVVTVYSASDETNAF---------EDGDKFVSPAQDALFKV 119
++I++ + PG+ ERV + ++ + + D PA D
Sbjct: 85 VNARIKMSKANDFYPGTTERVCLIKGTTESVMSMLTFICEKIRDKPDPNAKPAMDF---- 140
Query: 120 HDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI---L 176
D + K+LVP+ G +IGKGG ++ I+ E+GA I+I
Sbjct: 141 -----------DSKTPAERDKQVKILVPNSTAGMIIGKGGSFIKQIKEESGAYIQISQKA 189
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KD+ L + + + G++ +KA C I S++ ++P
Sbjct: 190 KDQAL------QERCITVIGDSDCNRKACCMILSKIAEDP 223
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 35/199 (17%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKEFFE 340
L+++ P G +IGKGG I Q+++E A IK+ ++ T CLI +++
Sbjct: 58 LKVLVPSVAAGAIIGKGGETIAQVQKEVNARIKMSKANDFYPGTTERVCLIKGTTESVM- 116
Query: 341 DTLSATIEAVVRLQPRCSEK----------IERDSGLISFTTRLLVPTSRIGCLIGKGGS 390
++ I +R +P + K ERD + ++LVP S G +IGKGGS
Sbjct: 117 -SMLTFICEKIRDKPDPNAKPAMDFDSKTPAERDKQV-----KILVPNSTAGMIIGKGGS 170
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTR--------- 441
I +++ + A I+I K K + + + + GD D + A ++++
Sbjct: 171 FIKQIKEESGAYIQISQKA---KDQALQERCITVIGDSDCNRKACCMILSKIAEDPQSGS 227
Query: 442 -LRANLFDREGAVSTFVPV 459
L + + G V+ F P
Sbjct: 228 CLNVSYAEVTGPVANFNPT 246
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 73/185 (39%), Gaps = 52/185 (28%)
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILK-DEHLPSCALRSDELVQI 194
G + K+LVPS G +IGKGG+ + ++ E A+I++ K ++ P R + I
Sbjct: 52 GDGSIYLKVLVPSVAAGAIIGKGGETIAQVQKEVNARIKMSKANDFYPGTTER---VCLI 108
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG 254
G V L I ++ D P P
Sbjct: 109 KGTTESVMSMLTFICEKIRDKPD---------------------------------PNAK 135
Query: 255 PYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
P + T + ++ ++++ P + G +IGKGG+ I QI++ESG
Sbjct: 136 PAMDFDSKTPAE---------------RDKQVKILVPNSTAGMIIGKGGSFIKQIKEESG 180
Query: 315 AAIKV 319
A I++
Sbjct: 181 AYIQI 185
>gi|6753518|ref|NP_034081.1| insulin-like growth factor 2 mRNA-binding protein 1 [Mus musculus]
gi|81908461|sp|O88477.1|IF2B1_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=Coding region determinant-binding protein;
Short=CRD-BP; AltName: Full=IGF-II mRNA-binding protein
1; AltName: Full=VICKZ family member 1
gi|3273749|gb|AAC72743.1| coding region determinant binding protein [Mus musculus]
gi|12851514|dbj|BAB29071.1| unnamed protein product [Mus musculus]
gi|148684057|gb|EDL16004.1| insulin-like growth factor 2 mRNA binding protein 1 [Mus musculus]
Length = 577
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 172/391 (43%), Gaps = 55/391 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S +
Sbjct: 193 PVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
+ S + L +H +D+ +V K+L ++ +G +IGK
Sbjct: 253 CS---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
G+ ++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 296 GRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE-- 349
Query: 217 SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
++ +A+ SH G + AA + + P A +S S AP
Sbjct: 350 -AYENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPE 404
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
++ +++ P +G +IGK G I Q+ + + A+IK+ T + V
Sbjct: 405 QEM------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVV--- 455
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSI 391
++ EA + Q R K++ ++ + T + VP S G +IGKGG
Sbjct: 456 ------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKT 509
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+ E++ LT A + ++P++ P E+D+++
Sbjct: 510 VNELQNLTAAEV-VVPRDQTP---DENDQVI 536
>gi|195128219|ref|XP_002008562.1| GI13561 [Drosophila mojavensis]
gi|193920171|gb|EDW19038.1| GI13561 [Drosophila mojavensis]
Length = 362
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 132/297 (44%), Gaps = 53/297 (17%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIV + R ++ +KI I + GS ER+VTV S TNA ++
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISD---GSCPERIVTV---SGTTNAIFSAFTLIT 86
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+ + D G Q+ +L+VP+ Q G +IGK G ++ IR TG
Sbjct: 87 KKFEEWCSQFN---------DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL-------- 222
I++ E LP+ R+ V +SG A + + + QI + ++P R +
Sbjct: 138 CSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQV 193
Query: 223 ---LASAISNSHSSSGSLVGPT---AATP----IVGIAPLMGP--YGGYK----GDTAGD 266
+ A + + G+ PT A P M P GG AG
Sbjct: 194 TGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMTPASTGGINHTALAALAGS 253
Query: 267 WSRSLYSAPRDDLSSKEFSLRLVCPVAN--IGGVIGKGGAIINQIRQESGAAIKVDS 321
R+ +A R E + V+N IG +IGKGG I +IRQ SGA I++ +
Sbjct: 254 QLRT-ANANRAQQQQHEMT------VSNDLIGCIIGKGGTKIAEIRQISGAMIRISN 303
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S ++ ++ F
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIF- 79
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFT---TRLLVPTSRIGCLIGKGGSIITEMRR 397
SA + + CS+ D G + T RL+VP S+ G LIGK GS I E+R+
Sbjct: 80 ---SAFTLITKKFEEWCSQF--NDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
T +I++ E LP + + V +SG + + Q+
Sbjct: 135 TTGCSIQVA-SEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ V IGC+IGKGG+ I E+R+++ A IRI E + D + ISG+ D
Sbjct: 270 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSV-- 325
Query: 434 ALIQVMTRLRANL 446
AL Q + +R ++
Sbjct: 326 ALAQYLINMRISM 338
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV R E+GA+I I D P + +V +SG +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTN 76
Query: 200 VVKKALCQIASRLHD 214
+ A I + +
Sbjct: 77 AIFSAFTLITKKFEE 91
>gi|57093423|ref|XP_538537.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Canis lupus
familiaris]
Length = 356
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 143/325 (44%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 172
Query: 219 S----------QHLLAS--------------AISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + AS A H++ P A I G I+P
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRCGDAAGYPHATHDLEGPPLDAYSIQGQHTISP 232
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 233 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNL 290
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 291 IGCIIGRQGANINEIRQMSGAQIKI 315
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + +C R ++ ++G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG----NCPER---IITLTGPTN 66
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 67 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 93
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 94 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 62 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 127 ELRGDEDS-DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
E++G S D Q T +L +P++ IGC+IG+ G + IR +GAQI+I
Sbjct: 266 EVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANP-----VE 320
Query: 186 LRSDELVQISGEASVVKKALCQIASRL 212
S V I+G A+ + A I +RL
Sbjct: 321 GSSGRQVTITGSAASISLAQYLINARL 347
>gi|410355313|gb|JAA44260.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 143/325 (44%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 172
Query: 219 S----------QHLLAS--------------AISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + AS A H++ P A I G I+P
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISP 232
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 233 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNL 290
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 291 IGYIIGRQGANINEIRQMSGAQIKI 315
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + +C R ++ ++G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG----NCPER---IITLTGPTN 66
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 67 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 93
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 94 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 62 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|225707620|gb|ACO09656.1| PolyrC-binding protein 2 [Osmerus mordax]
Length = 318
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 139/312 (44%), Gaps = 60/312 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTT-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I E+L D S + VT +++VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFSMII-EKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLHDNPS 217
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI L +P
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGTPQSIIECVKQICVVMLEQSPP 172
Query: 218 RSQHLLASAISNSHSSSGSLV----GPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
+ I SGS V G A + G + + D ++
Sbjct: 173 K-----GVTIPYRPKPSGSPVIFAGGQAYA--------VQGQHAIPQPDLTKLHQLAMQQ 219
Query: 274 APRD-----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
+P D S++ S + P IG +IG+ G+ IN+IRQ SGA IK+ +
Sbjct: 220 SPFPIAPNNQGFTGMDASAQTSSHEMTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANP 279
Query: 323 STEGDDCLITVS 334
D +T++
Sbjct: 280 VDGSADRQVTIT 291
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 75/177 (42%), Gaps = 46/177 (25%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSA-------- 95
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 100 LRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPQSIIECV 159
Query: 96 ------------------------SDETNAFEDGDKFVSPAQDA-----LFKVHDRV--- 123
S F G + Q A L K+H
Sbjct: 160 KQICVVMLEQSPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQ 219
Query: 124 ----IAEELRGDEDSDGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
IA +G D Q ++ ++ +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 220 SPFPIAPNNQGFTGMDASAQTSSHEMTIPNDLIGCIIGRQGSKINEIRQMSGAQIKI 276
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS ++S V
Sbjct: 60 TLAGPTTAIFKAFSMIIEKLEED-------ISSSMTNSTATSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LR+V P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRIVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + EK+E D S + + T R++VP S+ G LIGKGG I
Sbjct: 62 AGPTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|417410101|gb|JAA51528.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 365
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 143/325 (44%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 26 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 75
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 76 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 125
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 126 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 181
Query: 219 S----------QHLLAS--------------AISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + AS A H++ P A I G I+P
Sbjct: 182 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISP 241
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 242 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNL 299
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 300 IGCIIGRQGANINEIRQMSGAQIKI 324
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + +C R ++ ++G +
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG----NCPER---IITLTGPTN 75
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 76 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 102
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 103 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 142
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 70
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 71 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 130
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 131 EIRESTGAQVQV 142
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 127 ELRGDEDS-DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
E++G S D Q T +L +P++ IGC+IG+ G + IR +GAQI+I
Sbjct: 275 EVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANP-----VE 329
Query: 186 LRSDELVQISGEASVVKKALCQIASRL 212
S V I+G A+ + A I +RL
Sbjct: 330 GSSGRQVTITGSAASISLAQYLINARL 356
>gi|125558153|gb|EAZ03689.1| hypothetical protein OsI_25823 [Oryza sativa Indica Group]
Length = 610
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 131/289 (45%), Gaps = 42/289 (14%)
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
P S R V S+S E E +SPAQ+AL + D L G+ + G ++T
Sbjct: 120 PASPARRVEASSSSGE--PLE-----LSPAQEALVALLDSGWVVHLNGE--AWGAERMTC 170
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRS---DELVQISGEAS 199
+LV + ++ GKG I+ I +E+GA++R+ A + +E+V+I+G+ +
Sbjct: 171 LVLVEAGRLEAASGKG--ILWTIANESGAEVRVTPWGGEGGAAYAAQPPEEVVEITGDGT 228
Query: 200 VVKKALCQIASRLH-DNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGG 258
V++AL ++S L D P L S+ S +HS + L P P MG
Sbjct: 229 TVRRALVSVSSCLQGDGP------LGSSTS-AHSVNPILTQTFPKVP----EPEMG---S 274
Query: 259 YKGDTAGDWSRSLYSAPRDDLSS-----------KEFSLRLVCPVANIGGVIGKGGAIIN 307
D + + R+ S P D +FS RL+CPV GG+IGK G +I
Sbjct: 275 LYSDMSTE--RANTSIPHIDCPQGATGIEQTECVMQFSFRLLCPVTLAGGLIGKNGMVIK 332
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPR 356
I SGA++ V + ITVS+ E S AV+R+ R
Sbjct: 333 AIEVNSGASVDVGGPVHRCMERAITVSALEKPGQKFSMVENAVLRIFDR 381
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LCP+ G +IG+ G ++K + +++ + + +G V ER +TV +A E
Sbjct: 311 FRLLCPVTLAGGLIGKNGMVIKAIEVNSGASVDVGGPVHRCMERAITV-------SALEK 363
Query: 105 GDKFVSPAQDALFKVHDRV 123
+ S ++A+ ++ DR+
Sbjct: 364 PGQKFSMVENAVLRIFDRM 382
>gi|431913482|gb|ELK15157.1| Poly(rC)-binding protein 4 [Pteropus alecto]
Length = 403
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 139/302 (46%), Gaps = 43/302 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVFH 74
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ FK+ + + + G S VT +L++P+ Q G +IGK G ++
Sbjct: 75 AVSMIA------FKLDEDLCSATANGGNISR--PPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH--- 221
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 127 IRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIPY 182
Query: 222 ---------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLY 272
LL++ S V P T + ++ P+ D
Sbjct: 183 HPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPGMVPGLD------ 236
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T
Sbjct: 237 --PGAQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVT 290
Query: 333 VS 334
++
Sbjct: 291 IT 292
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLIS---FTTRLLVPTSRIGCLIGKGGSIITEMRR 397
+ ++ A + CS + G IS T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 ---AVSMIAFKLDEDLCSAT--ANGGNISRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 398 LTKANIRI 405
T A +++
Sbjct: 130 TTGAQVQV 137
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R + I+G +
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER---ITTITGSTA 70
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
V A+ IA +L ++ L SA +N GG
Sbjct: 71 AVFHAVSMIAFKLDED-------LCSATAN---------------------------GG- 95
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
++S +LRLV P + G +IGK G I +IR+ +GA ++V
Sbjct: 96 ------------------NISRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
>gi|189528952|ref|XP_001923490.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Danio rerio]
Length = 496
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 25 KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET--- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 47 KRTNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 98
Query: 82 VPGSEERVVTVYSASDETNAFED--GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ 139
PG+ ERV + + N D +K Q A ++ + + D
Sbjct: 99 YPGTTERVCLIQGTVEALNNVHDFIAEKVREMPQSAQKTEPVSILQPQTTVNPD----RV 154
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V ISGE
Sbjct: 155 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PDGINLQERVVTISGEPE 211
Query: 200 VVKKALCQIASRLHDNPSRSQHL 222
+KA+ I ++ ++P S L
Sbjct: 212 QNRKAVEIIVQKIQEDPQSSSCL 234
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 41/186 (22%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E+ L+++ P G +IGKGG I Q+++E+GA IK+ SK+F+ T
Sbjct: 56 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS-------------KSKDFYPGT 102
Query: 343 ------LSATIEAV----------VRLQPRCSEKIERDSGLISFTT---------RLLVP 377
+ T+EA+ VR P+ ++K E S L TT +L+VP
Sbjct: 103 TERVCLIQGTVEALNNVHDFIAEKVREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLIVP 162
Query: 378 TSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQ 437
S G +IGKGG+ + + + A +++ K P + + +V ISG+ + + A+
Sbjct: 163 NSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PDGINLQERVVTISGEPEQNRKAVEI 219
Query: 438 VMTRLR 443
++ +++
Sbjct: 220 IVQKIQ 225
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + ++A L E G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 383 ATNGYLSAASPLVASSLLATEKLAEGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 442
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I+ R+
Sbjct: 443 RIQISKKGEFVPGTRNRK---VTITGSPAATQAAQYLISQRI 481
>gi|432895613|ref|XP_004076075.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Oryzias
latipes]
Length = 503
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 20/208 (9%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
+ G KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++
Sbjct: 50 EAGCTKRTNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 101
Query: 80 ET---VPGSEERVVTVYSASDETNAFED--GDKFVSPAQDALFKVHDRVIAEELRGDEDS 134
++ PG+ ERV + + N+ + +K Q A ++ + + D
Sbjct: 102 KSKDFYPGTTERVCLIQGTVEALNSVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPD- 160
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V I
Sbjct: 161 ---RVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTI 214
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHL 222
SGE +KA+ I ++ ++P S L
Sbjct: 215 SGEPEQNRKAVEIIVQKIQEDPQSSSCL 242
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 90/175 (51%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS-----STEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI + +
Sbjct: 64 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 123
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+++ I VR P+ ++K E S L TT +L+VP S G +IGKG
Sbjct: 124 L--NSVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKG 181
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V ISG+ + + A+ ++ +++
Sbjct: 182 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTISGEPEQNRKAVEIIVQKIQ 233
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + ++A L E G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 390 ASNGYLNASSPLMASSLLATEKLADGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 449
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I+ R+
Sbjct: 450 RIQISKKGEFIPGTRNRK---VTITGSPAATQAAQYLISQRI 488
>gi|392340090|ref|XP_002726454.2| PREDICTED: poly(rC)-binding protein 1, partial [Rattus norvegicus]
Length = 365
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 143/325 (44%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 26 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 75
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 76 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 125
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 126 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 181
Query: 219 S----------QHLLAS--------------AISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + AS A H++ P A I G I+P
Sbjct: 182 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISP 241
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 242 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNL 299
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 300 IGCIIGRQGANINEIRQMSGAQIKI 324
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + +C R ++ ++G +
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG----NCPER---IITLTGPTN 75
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 76 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 102
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 103 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 142
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 70
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 71 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 130
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 131 EIRESTGAQVQV 142
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 127 ELRGDEDS-DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
E++G S D Q T +L +P++ IGC+IG+ G + IR +GAQI+I
Sbjct: 275 EVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANP-----VE 329
Query: 186 LRSDELVQISGEASVVKKALCQIASRL 212
S V I+G A+ + A I +RL
Sbjct: 330 GSSGRQVTITGSAASISLAQYLINARL 356
>gi|332864859|ref|XP_001157309.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 1 [Pan troglodytes]
Length = 440
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 149/319 (46%), Gaps = 43/319 (13%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
++ K+L ++ +G +IGK G+ ++ I +T +I I + L + + + G
Sbjct: 137 EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNV 194
Query: 199 SVVKKALCQIASRL---HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGP 255
KA +I ++ ++N S +L A I + ++ L PT+ P
Sbjct: 195 ETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMP---------- 244
Query: 256 YGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGA 315
T+G S P+ + S E ++ L P ++G +IGK G I Q+ + +GA
Sbjct: 245 -----PPTSGPPSAMTPPYPQFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 298
Query: 316 AIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISF 370
+IK+ + E D + + ++ EA + Q R KI+ ++ + +
Sbjct: 299 SIKI--APAEAPDAKVRMV-------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKL 349
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL- 428
+ VP+ G +IGKGG + E++ L+ A + ++P++ P E+D+ +V+I+G
Sbjct: 350 EAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFY 405
Query: 429 --DLAKDALIQVMTRLRAN 445
+A+ + +++T+++ +
Sbjct: 406 ACQVAQRKIQEILTQVKQH 424
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 42/186 (22%)
Query: 35 QFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTV- 92
QF +TV+ ++ P +G+IIG+ G+ +KQL + I+I P ++ R+V +
Sbjct: 260 QFEQSETETVHLFI-PALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIIT 318
Query: 93 ------YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+ A + FVSP ++ + H R V
Sbjct: 319 GPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIR-----------------------V 355
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKAL 205
PS G VIGKGG+ V +++ + A++ + +D+ +D+ +V+I+G
Sbjct: 356 PSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQ----TPDENDQVVVKITGHFYA----- 406
Query: 206 CQIASR 211
CQ+A R
Sbjct: 407 CQVAQR 412
>gi|224113143|ref|XP_002316405.1| predicted protein [Populus trichocarpa]
gi|222865445|gb|EEF02576.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 127/284 (44%), Gaps = 35/284 (12%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSASDET 99
T R+L GS+IG+GG + + + ++I++ E PG+ +R++
Sbjct: 35 TYTRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDRII--------- 85
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAE---ELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
VS D + K + +IA+ E+ ++ + ++ +L+VP+ G +IG
Sbjct: 86 --------MVSGGIDDVLKAVELIIAKLLSEIPAEDGDEAEPRMRVRLVVPNSACGSIIG 137
Query: 157 KGGQIVQNIRSETGAQIRILK-DEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
KGG I+++ E+ A I+I D +D LV ++G A+ I S+L D+
Sbjct: 138 KGGSIIKSFIEESHAGIKISPLDTKFFGL---TDRLVTVTGTLEEQMHAIDLILSKLTDD 194
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
P SQ + A S +G + P + + + + +
Sbjct: 195 PHYSQTMHA-----PFSYAGVFFSGFDGIQYACVLPYVATAAYNSMNHGPNGAAVKFQHN 249
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+DD+++ S+ + +IG V+G+GG I +I Q SGA +K+
Sbjct: 250 KDDITN---SVTIGVADEHIGLVVGRGGRNIMEISQTSGARLKI 290
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 77/160 (48%), Gaps = 10/160 (6%)
Query: 287 RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE----GDDCLITVSSKEFFEDT 342
R + A G VIGKGGA I + +SGA I++ S + E D +I VS +D
Sbjct: 38 RFLVSNAAAGSVIGKGGATITDFQSQSGARIQL-SRNYEFFPGTSDRIIMVSGG--IDDV 94
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKAN 402
L A + +L + + D RL+VP S G +IGKGGSII + A
Sbjct: 95 LKAVELIIAKLLSEIPAE-DGDEAEPRMRVRLVVPNSACGSIIGKGGSIIKSFIEESHAG 153
Query: 403 IRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
I+I P + K D +V ++G L+ A+ ++++L
Sbjct: 154 IKISPLDT--KFFGLTDRLVTVTGTLEEQMHAIDLILSKL 191
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 79/196 (40%), Gaps = 63/196 (32%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVV 201
+ LV + G VIGKGG + + +S++GA+I++ ++ E P SD ++ +SG V
Sbjct: 38 RFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGT---SDRIIMVSGGIDDV 94
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
KA+ I IA L+ G
Sbjct: 95 LKAVELI----------------------------------------IAKLLSEIPAEDG 114
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D A PR +RLV P + G +IGKGG+II +ES A IK+
Sbjct: 115 DEA---------EPR-------MRVRLVVPNSACGSIIGKGGSIIKSFIEESHAGIKISP 158
Query: 322 SSTEG---DDCLITVS 334
T+ D L+TV+
Sbjct: 159 LDTKFFGLTDRLVTVT 174
>gi|126336339|ref|XP_001367908.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Monodelphis
domestica]
Length = 410
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 130/281 (46%), Gaps = 43/281 (15%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A ++
Sbjct: 27 KEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTGAVFHAVSMIA 80
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
FK+ + + G S VT +L++P+ Q G +IGK G ++ IR TG
Sbjct: 81 ------FKLDEDLCTGPPNGGSISK--PPVTLRLVIPASQCGSLIGKAGTKIKEIRETTG 132
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS 230
AQ+++ D LP+ R+ V +SG + + QI + + ++P + +
Sbjct: 133 AQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATI-------P 181
Query: 231 HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR------------SLYSAPRDD 278
+ S SL T ++ G Y T + S+ S P D
Sbjct: 182 YHPSLSL-----GTVLLSANQGFSVQGQYGTVTPAEVSKLQQLSGHPVPFASPSVVPGLD 236
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S++ S + P IG VIG+ G+ I++IRQ SGA IK+
Sbjct: 237 PSAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 14/128 (10%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
+LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 18 LTLRMIMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTGAVFH--- 74
Query: 344 SATIEAVVRLQPRCSEKI---ERDSGLIS---FTTRLLVPTSRIGCLIGKGGSIITEMRR 397
AV + + E + + G IS T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 -----AVSMIAFKLDEDLCTGPPNGGSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 398 LTKANIRI 405
T A +++
Sbjct: 130 TTGAQVQV 137
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 79/191 (41%), Gaps = 46/191 (24%)
Query: 29 TGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEE 87
TG I P T+ R + P + GS+IG+ G +K++R T +++++ G+ +P S E
Sbjct: 89 TGPPNGGSISKPPVTL-RLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTE 147
Query: 88 RVVTVYSASDE---------TNAFEDGDKFVS-PAQDAL------------FKVHDR--- 122
R VTV D E K + P +L F V +
Sbjct: 148 RAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGT 207
Query: 123 VIAEELRGDEDSDGGHQV------------------TAKLLVPSDQIGCVIGKGGQIVQN 164
V E+ + GH V + + LVP+D IGCVIG+ G +
Sbjct: 208 VTPAEVSKLQQLS-GHPVPFASPSVVPGLDPSAQTSSQEFLVPNDLIGCVIGRQGSKISE 266
Query: 165 IRSETGAQIRI 175
IR +GA I+I
Sbjct: 267 IRQMSGAHIKI 277
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 77/189 (40%), Gaps = 60/189 (31%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++++ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMIMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G V A+ IA +L ++ GP
Sbjct: 62 ITTITGSTGAVFHAVSMIAFKLDED--------------------LCTGP---------- 91
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
P GG +S +LRLV P + G +IGK G I +IR
Sbjct: 92 ----PNGG-------------------SISKPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QESGAAIKV 319
+ +GA ++V
Sbjct: 129 ETTGAQVQV 137
>gi|395851184|ref|XP_003798146.1| PREDICTED: poly(rC)-binding protein 3 [Otolemur garnettii]
Length = 361
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + ++ + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIVNS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IVNSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 62 TGPTDAIFKAFAMIAYKFEEDIVNSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 122 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 173
Query: 452 AVSTFVP 458
A + P
Sbjct: 174 ATIPYRP 180
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 285 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 319
>gi|386764191|ref|NP_001245616.1| IGF-II mRNA-binding protein, isoform L [Drosophila melanogaster]
gi|383293324|gb|AFH07330.1| IGF-II mRNA-binding protein, isoform L [Drosophila melanogaster]
Length = 638
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 191/426 (44%), Gaps = 70/426 (16%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 119 NQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 178
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y + TNA + + +V + +G E S
Sbjct: 179 HRKENV-GSLEKSITIYGNPENCTNACKR-----------ILEVMQQEAISTNKG-ELSP 225
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 226 ECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVK 283
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-- 253
G L +N SR+++ +++ + S+ + + P + G+ P+
Sbjct: 284 G---------------LIENMSRAENQISTKLRQSYENDLQAMAPQSLM-FPGLHPMAMM 327
Query: 254 -GPYGGYKGDTAGDW----SRSLYSAPR--------DDLSSKEFSLRLVCPVANIGGVIG 300
P G +T+ + S ++ P +DL + L P +G +IG
Sbjct: 328 STPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTY---LYIPNNAVGAIIG 384
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
G+ I I + S A++K+ + + D L + ++ T+ T E + Q EK
Sbjct: 385 TRGSHIRSIMRFSNASLKI--APLDADKPLDQQTERKV---TIVGTPEGQWKAQYMIFEK 439
Query: 361 IERDSGL------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ R+ G + T LLV +S++G +IGKGG + E++R+T + I+ LP+ L
Sbjct: 440 M-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPP 497
Query: 415 ASEDDE 420
+ D+E
Sbjct: 498 SGGDEE 503
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 367 QETTYLYI-PNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 425
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E G +D ++T +LLV S Q+G +
Sbjct: 426 PEG-------------QWKAQYMIFEKMREEGFMCGTDDV----RLTVELLVASSQVGRI 468
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLH 213
IGKGGQ V+ ++ TG+ I++ + P + V I G V+ A +I A L
Sbjct: 469 IGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLS 528
Query: 214 DNP 216
NP
Sbjct: 529 TNP 531
>gi|397521888|ref|XP_003831016.1| PREDICTED: poly(rC)-binding protein 1 [Pan paniscus]
Length = 455
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 143/325 (44%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 116 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 165
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 166 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 215
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 216 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 271
Query: 219 S----------QHLLAS--------------AISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + AS A H++ P A I G I+P
Sbjct: 272 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISP 331
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 332 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNL 389
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 390 IGCIIGRQGANINEIRQMSGAQIKI 414
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 60/189 (31%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
DE+++ +T +LL+ ++G +IGK G+ V+ IR E+GA+I I + +C R
Sbjct: 104 DEENELNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG----NCPER--- 156
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
++ ++G + + KA I +L ++ + S+++NS TAA
Sbjct: 157 IITLTGPTNAIFKAFAMIIDKLEED-------INSSMTNS----------TAA------- 192
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
S +LRLV P G +IGKGG I +IR
Sbjct: 193 -----------------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIR 223
Query: 311 QESGAAIKV 319
+ +GA ++V
Sbjct: 224 ESTGAQVQV 232
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 113 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 160
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 161 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 220
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 221 EIRESTGAQVQV 232
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 127 ELRGDEDS-DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
E++G S D Q T +L +P++ IGC+IG+ G + IR +GAQI+I
Sbjct: 365 EVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANP-----VE 419
Query: 186 LRSDELVQISGEASVVKKALCQIASRL 212
S V I+G A+ + A I +RL
Sbjct: 420 GSSGRQVTITGSAASISLAQYLINARL 446
>gi|348537887|ref|XP_003456424.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Oreochromis
niloticus]
Length = 496
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 25 KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET--- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 47 KRTNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 98
Query: 82 VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV- 140
PG+ ERV + + N D F++ + + + + + + +V
Sbjct: 99 YPGTTERVCLIQGTVEALNGVHD---FIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVK 155
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V ISGE
Sbjct: 156 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTISGEPEQ 212
Query: 201 VKKALCQIASRLHDNPSRSQHL 222
+KA+ I ++ ++P S L
Sbjct: 213 NRKAVEIIVQKIQEDPQSSSCL 234
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 41/186 (22%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E+ L+++ P G +IGKGG I Q+++E+GA IK+ SK+F+ T
Sbjct: 56 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS-------------KSKDFYPGT 102
Query: 343 ------LSATIEAV----------VRLQPRCSEKIERDSGLISFTT---------RLLVP 377
+ T+EA+ VR P+ ++K E S L TT +L+VP
Sbjct: 103 TERVCLIQGTVEALNGVHDFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVKQAKLIVP 162
Query: 378 TSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQ 437
S G +IGKGG+ + + + A +++ K P+ + + +V ISG+ + + A+
Sbjct: 163 NSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTISGEPEQNRKAVEI 219
Query: 438 VMTRLR 443
++ +++
Sbjct: 220 IVQKIQ 225
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + ++A L E G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 383 ATNGYLSAASPLVASSLLATEKLAEGAKEVVEIAVPENLVGAILGKGGKTLVEYQELTGA 442
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I+ R+
Sbjct: 443 RIQISKKGEFIPGTRNRK---VTITGSQAATQAAQYLISQRI 481
>gi|281360685|ref|NP_001162717.1| IGF-II mRNA-binding protein, isoform J [Drosophila melanogaster]
gi|272506050|gb|ACZ95252.1| IGF-II mRNA-binding protein, isoform J [Drosophila melanogaster]
gi|383873394|gb|AFH55503.1| FI20063p1 [Drosophila melanogaster]
Length = 580
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 191/426 (44%), Gaps = 70/426 (16%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 61 NQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 120
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y + TNA + + +V + +G E S
Sbjct: 121 HRKENV-GSLEKSITIYGNPENCTNACKR-----------ILEVMQQEAISTNKG-ELSP 167
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 168 ECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVK 225
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-- 253
G L +N SR+++ +++ + S+ + + P + G+ P+
Sbjct: 226 G---------------LIENMSRAENQISTKLRQSYENDLQAMAPQSLM-FPGLHPMAMM 269
Query: 254 -GPYGGYKGDTAGDW----SRSLYSAPR--------DDLSSKEFSLRLVCPVANIGGVIG 300
P G +T+ + S ++ P +DL + L P +G +IG
Sbjct: 270 STPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTY---LYIPNNAVGAIIG 326
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
G+ I I + S A++K+ + + D L + ++ T+ T E + Q EK
Sbjct: 327 TRGSHIRSIMRFSNASLKI--APLDADKPLDQQTERKV---TIVGTPEGQWKAQYMIFEK 381
Query: 361 IERDSGL------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ R+ G + T LLV +S++G +IGKGG + E++R+T + I+ LP+ L
Sbjct: 382 M-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPP 439
Query: 415 ASEDDE 420
+ D+E
Sbjct: 440 SGGDEE 445
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 309 QETTYLYI-PNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 367
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E G +D ++T +LLV S Q+G +
Sbjct: 368 PEG-------------QWKAQYMIFEKMREEGFMCGTDDV----RLTVELLVASSQVGRI 410
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLH 213
IGKGGQ V+ ++ TG+ I++ + P + V I G V+ A +I A L
Sbjct: 411 IGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLS 470
Query: 214 DNP 216
NP
Sbjct: 471 TNP 473
>gi|324518489|gb|ADY47116.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
gi|324519835|gb|ADY47493.1| Heterogeneous nuclear ribonucleoprotein K, partial [Ascaris suum]
Length = 361
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 133/305 (43%), Gaps = 43/305 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSE--ERVVTVYSASDETNAFE 103
R L P R G++IG+GGE +K+LR + + + T+P S+ ER+VT+ + D N
Sbjct: 41 RLLVPSRGAGAVIGKGGESIKRLRAECDATL----TIPDSQTPERIVTIVAEID--NVIR 94
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ + P D K D D++ + +LLV G +IG+GG ++
Sbjct: 95 CVNEII-PRLDECLKTRD--------SDDEGSARGESELRLLVHQSHAGAIIGRGGYRIK 145
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD----NPSRS 219
+R ET Q+++ C ++ ++QI G + + I + L + PSR
Sbjct: 146 ELREETSTQLKVYSQ----CCPQSTERVIQIIGVPEKIIACVILIINMLKEIPIKGPSRP 201
Query: 220 QHLLASAISNSHSSSG----------SLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + H G G + AP PYGG +G G S
Sbjct: 202 YESMFYDPNFVHEYGGFPPDRNYRGMGPRGGMYGGGLPPRAPRF-PYGG-RGMGMG-VSP 258
Query: 270 SLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDC 329
+ + + + ++ P G +IGKGG IN+IR+ESGA I V+ +
Sbjct: 259 FPPAPFGGPMQTTQVTI----PNELGGTIIGKGGERINRIREESGAHIVVEPQQPNSER- 313
Query: 330 LITVS 334
+IT+S
Sbjct: 314 IITIS 318
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
++ L++ ++ LRL+ P G VIGKGG I ++R E A + + S T + ++T+ +
Sbjct: 30 QEALAAGKYELRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDSQT--PERIVTIVA 87
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT--RLLVPTSRIGCLIGKGGSIIT 393
+ ++ + E + RL + D G + RLLV S G +IG+GG I
Sbjct: 88 E--IDNVIRCVNEIIPRLDECLKTRDSDDEGSARGESELRLLVHQSHAGAIIGRGGYRIK 145
Query: 394 EMRRLTKANIRI 405
E+R T +++
Sbjct: 146 ELREETSTQLKV 157
>gi|351713542|gb|EHB16461.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Heterocephalus
glaber]
Length = 577
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 173/390 (44%), Gaps = 57/390 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+ R+I E + + +D+ +V K+L ++ +G +IGK G
Sbjct: 255 SA------------------CRMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEG 296
Query: 160 QIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
+ ++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 297 RNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEITKKVRE--- 349
Query: 218 RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD 277
++ +A+ SH G + AA + + P A +S S AP
Sbjct: 350 AYENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVSGAAPYS-SFMQAPEQ 405
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
++ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 406 EM------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI---- 455
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSII 392
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 -----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTV 510
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D++V
Sbjct: 511 NELQNLTAAEV-VVPRDQTP---DENDQVV 536
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|390458234|ref|XP_003732080.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
Length = 349
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 146/325 (44%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ +++ + I+G V + + QI + + S+
Sbjct: 117 GCKIKEIRKSTGAQVQVAGD-MLPN---STEQAITIAGMPQSVTECVKQICLVMLETISQ 172
Query: 219 S----------QHLLASA----------ISNS----HSSSGSLVGPTAATPIVG---IAP 251
S Q + AS+ SN+ H++ P A I G I+P
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRYSNTAGYPHATHDLEGPPLDAYSIQGQHTISP 232
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 233 LHLANLNQVARQQSHFAMMHGGTGFAGIDSNSPEVKGYWASLD--ASTQTTHELTIPNNL 290
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ G IN+IRQ SGA IK+
Sbjct: 291 IGCIIGRQGTNINEIRQMSGAQIKI 315
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 62 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R+ T A +++
Sbjct: 122 EIRKSTGAQVQV 133
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + +C R ++ ++G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG----NCPER---IITLTGPTN 66
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 67 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 93
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 94 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRKSTGAQVQV 133
>gi|395532668|ref|XP_003768391.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Sarcophilus harrisii]
Length = 577
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 169/382 (44%), Gaps = 54/382 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S +
Sbjct: 193 PVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGK 157
++ ++I E ++ + +D+ +V K+L ++ +G +IGK
Sbjct: 253 CSSA------------------CKMILEIMQKEAKDTKTADEVPLKILAHNNFVGRLIGK 294
Query: 158 GGQIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
G+ ++ + +T +I I L+D L + + + G KA +I ++ +
Sbjct: 295 EGRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGSIENCCKAEQEIMKKVRE- 349
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
++ +A+ SH G + AA + + P A +S S AP
Sbjct: 350 --AYENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVSGAAPYS-SFMQAP 403
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
++ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 404 EQEM------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI-- 455
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R K++ ++ + T + VP S G +IGKGG
Sbjct: 456 -------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGK 508
Query: 391 IITEMRRLTKANIRILPKENLP 412
+ E++ LT A + ++P++ P
Sbjct: 509 TVNELQNLTAAEV-VVPRDQTP 529
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|410227970|gb|JAA11204.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 143/325 (44%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 172
Query: 219 S----------QHLLAS--------------AISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + AS A H++ P A I G I+P
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISP 232
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 233 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWAGLD--ASTQTTHELTIPNNL 290
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 291 IGCIIGRQGANINEIRQMSGAQIKI 315
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + +C R ++ ++G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG----NCPER---IITLTGPTN 66
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 67 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 93
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 94 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 62 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
D Q T +L +P++ IGC+IG+ G + IR +GAQI+I S V I
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANP-----VEGSSGRQVTI 329
Query: 195 SGEASVVKKALCQIASRL 212
+G A+ + A I +RL
Sbjct: 330 TGSAASISLAQYLINARL 347
>gi|402862114|ref|XP_003895414.1| PREDICTED: poly(rC)-binding protein 3-like, partial [Papio anubis]
Length = 327
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 204
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 30/169 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
E+R T A +++ + LP + + V ISG DA+IQ + ++
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQI 194
>gi|442634098|ref|NP_001262198.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
gi|440216175|gb|AGB94891.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
Length = 368
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 131/302 (43%), Gaps = 57/302 (18%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIV + R ++ +KI I + GS ER+VTV S TNA ++
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISD---GSCPERIVTV---SGTTNAIFSAFTLIT 86
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+ + D G Q+ +L+VP+ Q G +IGK G ++ IR TG
Sbjct: 87 KKFEEWCSQFN---------DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL-------- 222
I++ E LP+ R+ V +SG A + + + QI + ++P R +
Sbjct: 138 CSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQV 193
Query: 223 ---LASAISNSHSSSGSLVGPT---AATP----IVGIAPLMGP--YGGYK---------G 261
+ A + + G+ PT A P M P GG
Sbjct: 194 TGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTGSAPAALA 253
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN--IGGVIGKGGAIINQIRQESGAAIKV 319
AG R+ A R E + V+N IG +IGKGG I +IRQ SGA I++
Sbjct: 254 ALAGSQLRTANPANRAQQQQHEMT------VSNDLIGCIIGKGGTKIAEIRQISGAMIRI 307
Query: 320 DS 321
+
Sbjct: 308 SN 309
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S ++ ++ F
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIF- 79
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFT---TRLLVPTSRIGCLIGKGGSIITEMRR 397
SA + + CS+ D G + T RL+VP S+ G LIGK GS I E+R+
Sbjct: 80 ---SAFTLITKKFEEWCSQF--NDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
T +I++ E LP + + V +SG + + Q+
Sbjct: 135 TTGCSIQVA-SEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
+LR ++ Q ++ V +D IGC+IGKGG + IR +GA IRI E
Sbjct: 259 QLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERE--GG 316
Query: 187 RSDELVQISGEASVVKKALCQIASRL 212
+D + ISG V A I R+
Sbjct: 317 NTDRTITISGNPDSVALAQYLINMRI 342
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ V IGC+IGKGG+ I E+R+++ A IRI E + D + ISG+ D
Sbjct: 276 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSV-- 331
Query: 434 ALIQVMTRLRANL 446
AL Q + +R ++
Sbjct: 332 ALAQYLINMRISM 344
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV R E+GA+I I D P + +V +SG +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTN 76
Query: 200 VVKKALCQIASRLHD 214
+ A I + +
Sbjct: 77 AIFSAFTLITKKFEE 91
>gi|196009850|ref|XP_002114790.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
gi|190582852|gb|EDV22924.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
Length = 360
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 143/303 (47%), Gaps = 38/303 (12%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI---GETVPGSEERVVTVYSASD 97
+ V + L P GSIIG+GG+++ L+ D+K++IR+ +T PG++ERV+ + +
Sbjct: 20 DKVVLKLLIPNYAAGSIIGKGGDVINDLQNDSKTRIRLSHNNDTFPGTKERVIVI---TG 76
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEEL--RGDEDSDGGHQVTAKLLVPSDQIGCVI 155
++F+ L KV + A++ G D + Q+ K++VP+ G +I
Sbjct: 77 SIAGVRQVNRFI------LEKVSEEGKADKAIQYGVLDKNRNRQL--KMIVPNAAAGVII 128
Query: 156 GKGGQIVQNIRSETGAQIRILK-------DEHLPSCALRSDELVQISGEASVVKKALCQI 208
GKGG ++ I+ ++GA +++ + DE + + +E +++ ++ K L I
Sbjct: 129 GKGGSNIKEIQDKSGAHVQVSQKKAQYAIDERILTVTGEFNE--RLTAWELIIWKCLEDI 186
Query: 209 ASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYK-------G 261
+ + + S S A + HS+ G P+ A PY +
Sbjct: 187 NNLPNTSVSYSHVEPAGTLPALHSNYYG-GGNANDRPMDSSAASYDPYTSERYSPTQVTQ 245
Query: 262 DTAGDWSRSLYSAP---RDDLSSK--EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA 316
D D + S P R++ S E +++ P + IG ++GK G +I+ I+ SGA
Sbjct: 246 DAQADRQYGMQSYPPTARNNRPSSYGETVIKIPVPDSIIGAILGKRGKVISDIQNISGAH 305
Query: 317 IKV 319
I+V
Sbjct: 306 IQV 308
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+D+ S + L+L+ P G +IGKGG +IN ++ +S I++ + +D
Sbjct: 14 KDNSSGDKVVLKLLIPNYAAGSIIGKGGDVINDLQNDSKTRIRL----SHNNDTFPGTKE 69
Query: 336 KEFFEDTLSATIEAVVR-LQPRCSEKIERDSGLI--------SFTTRLLVPTSRIGCLIG 386
+ A + V R + + SE+ + D + + +++VP + G +IG
Sbjct: 70 RVIVITGSIAGVRQVNRFILEKVSEEGKADKAIQYGVLDKNRNRQLKMIVPNAAAGVIIG 129
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
KGGS I E++ + A++++ K+ I D+ ++ ++G+ +
Sbjct: 130 KGGSNIKEIQDKSGAHVQVSQKKAQYAI---DERILTVTGEFN 169
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/217 (19%), Positives = 91/217 (41%), Gaps = 59/217 (27%)
Query: 132 EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI-LKDEHLPSCALRSDE 190
+D+ G +V KLL+P+ G +IGKGG ++ ++++++ +IR+ ++ P R
Sbjct: 14 KDNSSGDKVVLKLLIPNYAAGSIIGKGGDVINDLQNDSKTRIRLSHNNDTFPGTKER--- 70
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
++ I+G + V++ I ++ + + + + + + ++ P AA
Sbjct: 71 VIVITGSIAGVRQVNRFILEKVSEEGKADKAIQYGVLDKNRNRQLKMIVPNAAA------ 124
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
G +IGKGG+ I +I+
Sbjct: 125 ---------------------------------------------GVIIGKGGSNIKEIQ 139
Query: 311 QESGAAIKVDSSSTEG--DDCLITVSSKEFFEDTLSA 345
+SGA ++V + D+ ++TV+ + F + L+A
Sbjct: 140 DKSGAHVQVSQKKAQYAIDERILTVTGE--FNERLTA 174
>gi|126308261|ref|XP_001367379.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Monodelphis domestica]
Length = 577
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 169/382 (44%), Gaps = 54/382 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S +
Sbjct: 193 PVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGK 157
++ ++I E ++ + +D+ +V K+L ++ +G +IGK
Sbjct: 253 CSSA------------------CKMILEIMQKEAKDTKTADEVPLKILAHNNFVGRLIGK 294
Query: 158 GGQIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
G+ ++ + +T +I I L+D L + + + G KA +I ++ +
Sbjct: 295 EGRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGSIENCCKAEQEIMKKVRE- 349
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
++ +A+ SH G + AA + + P A +S S AP
Sbjct: 350 --AYENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVSGAAPYS-SFMQAP 403
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
++ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 404 EQEM------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI-- 455
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R K++ ++ + T + VP S G +IGKGG
Sbjct: 456 -------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGK 508
Query: 391 IITEMRRLTKANIRILPKENLP 412
+ E++ LT A + ++P++ P
Sbjct: 509 TVNELQNLTAAEV-VVPRDQTP 529
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|393905262|gb|EJD73914.1| hypothetical protein LOAG_18700 [Loa loa]
Length = 228
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 89/172 (51%), Gaps = 22/172 (12%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ G+ +K +R + +KI I + GS ER+VT+ ++ N
Sbjct: 11 KEVGSIIGKRGDHIKLIRDQSGAKINISD---GSCPERIVTITGSTGTIN---------- 57
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
A + + + ++L+ +S +T +L+VP+ Q GC+IGKGG ++ IR TG
Sbjct: 58 ---KAFIMICAK-LQQDLQALPNSIPKPPITMRLIVPATQCGCIIGKGGSKIKEIREATG 113
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
A I++ E LPS R+ V ISG A + + I L + P++ L
Sbjct: 114 ASIQV-ASEMLPSSTERA---VTISGSADSIVDCMRNICQILLEAPAKGNTL 161
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 70/145 (48%), Gaps = 17/145 (11%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS----KEFFEDTLSATIEAV 350
+G +IGK G I IR +SGA I + S IT S+ K F + A ++
Sbjct: 13 VGSIIGKRGDHIKLIRDQSGAKINISDGSCPERIVTITGSTGTINKAFI--MICAKLQQD 70
Query: 351 VRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKEN 410
++ P K T RL+VP ++ GC+IGKGGS I E+R T A+I++ E
Sbjct: 71 LQALPNSIPKPP-------ITMRLIVPATQCGCIIGKGGSKIKEIREATGASIQVA-SEM 122
Query: 411 LPKIASEDDEMVQISGDLDLAKDAL 435
LP S + V ISG D D +
Sbjct: 123 LP---SSTERAVTISGSADSIVDCM 144
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS----SSTE 325
+ + ++RL+ P G +IGKGG+ I +IR+ +GA+I+V S SSTE
Sbjct: 76 NSIPKPPITMRLIVPATQCGCIIGKGGSKIKEIREATGASIQVASEMLPSSTE 128
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + G IIG+GG +K++R T + I++ E +P S ER VT+ ++D
Sbjct: 86 RLIVPATQCGCIIGKGGSKIKEIREATGASIQVASEMLPSSTERAVTISGSAD 138
>gi|195377361|ref|XP_002047459.1| GJ11921 [Drosophila virilis]
gi|194154617|gb|EDW69801.1| GJ11921 [Drosophila virilis]
Length = 589
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 132/297 (44%), Gaps = 53/297 (17%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIV + R ++ +KI I + GS ER+VTV S TNA ++
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISD---GSCPERIVTV---SGTTNAIFSAFTLIT 86
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+ + D G Q+ +L+VP+ Q G +IGK G ++ IR TG
Sbjct: 87 KKFEEWCSQFN---------DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL-------- 222
I++ E LP+ R+ V +SG A + + + QI + ++P R +
Sbjct: 138 CSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQV 193
Query: 223 ---LASAISNSHSSSGSLVGPT---AATP----IVGIAPLMGP--YGGYK----GDTAGD 266
+ A + + G+ PT A P M P GG AG
Sbjct: 194 TGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMTPASTGGINHTALAALAGS 253
Query: 267 WSRSLYSAPRDDLSSKEFSLRLVCPVAN--IGGVIGKGGAIINQIRQESGAAIKVDS 321
R+ +A R E + V+N IG +IGKGG I +IRQ SGA I++ +
Sbjct: 254 QLRT-ANANRAQQQQHEMT------VSNDLIGCIIGKGGTKIAEIRQISGAMIRISN 303
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S ++ ++ F
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIF- 79
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTT---RLLVPTSRIGCLIGKGGSIITEMRR 397
SA + + CS+ D G + T RL+VP S+ G LIGK GS I E+R+
Sbjct: 80 ---SAFTLITKKFEEWCSQF--NDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
T +I++ E LP + + V +SG + + Q+
Sbjct: 135 TTGCSIQVA-SEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ V IGC+IGKGG+ I E+R+++ A IRI E + D + ISG+ D
Sbjct: 270 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSVAL 327
Query: 434 A--LIQVMTRL-RANLFDR 449
A LI + L +ANL D+
Sbjct: 328 AQYLINMSVELQKANLQDQ 346
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSAS 96
+G R + P + GS+IG+ G +K++R T I++ E +P S ER VT+ ++
Sbjct: 102 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 161
Query: 97 DE 98
++
Sbjct: 162 EQ 163
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV R E+GA+I I D P + +V +SG +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTN 76
Query: 200 VVKKALCQIASRLHD 214
+ A I + +
Sbjct: 77 AIFSAFTLITKKFEE 91
>gi|390604812|gb|EIN14203.1| hypothetical protein PUNSTDRAFT_95868 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 330
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 142/330 (43%), Gaps = 54/330 (16%)
Query: 30 GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERV 89
G R GP+ R L + G IIG+GG+ V LR T K + + VPG +RV
Sbjct: 15 GRSRSGSPAGPDTLTLRALVSTKDAGVIIGKGGKNVADLRDQTGVKAGVSKVVPGVHDRV 74
Query: 90 VTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDS----DGGHQVTAKLL 145
+T +S + D + K + ++A+ + + S + +LL
Sbjct: 75 LT-----------------ISGSVDRVAKAYGLIVAQLVASNPTSPISASSSTHTSLRLL 117
Query: 146 VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKAL 205
+ + +G +IG+GG ++ I+ +GA++ KD LP R +V++ G +++A+
Sbjct: 118 ISHNLMGTIIGRGGTRIKAIQDNSGARMVASKD-MLPQSTER---VVEVHGSVEAIERAV 173
Query: 206 CQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVG----IAPLMGPYGGYKG 261
I L ++ R + L P A G + G YGG +
Sbjct: 174 DDIGKSLLEDWERGLGTV-------------LFHPGAGDERSGSSRRYSENRGSYGGSRQ 220
Query: 262 D-----TAGDWSRSLYSAPR-DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGA 315
+ G SR S+P+ +L ++ S+ P +G +IG+GG+ I +IR+ SG+
Sbjct: 221 SNGRPGSPGSPSRQAPSSPQPTNLRTQNISI----PSDMVGCIIGRGGSKITEIRRLSGS 276
Query: 316 AIKVDSSSTE--GDDCLITVSSKEFFEDTL 343
I + + + G+ V + E E L
Sbjct: 277 KISIAKAPHDETGERMFTIVGTPEANEKAL 306
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 52/218 (23%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSK-IRIGETVPGSEERVVTVYSASDETNA 101
T R L +G+IIGRGG +K ++ ++ ++ + + +P S ERVV V+ +
Sbjct: 112 TSLRLLISHNLMGTIIGRGGTRIKAIQDNSGARMVASKDMLPQSTERVVEVH------GS 165
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEEL----RGDEDSD------------GGHQV----- 140
E ++ V +L + +R + L GDE S GG +
Sbjct: 166 VEAIERAVDDIGKSLLEDWERGLGTVLFHPGAGDERSGSSRRYSENRGSYGGSRQSNGRP 225
Query: 141 --------------------TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
T + +PSD +GC+IG+GG + IR +G++I I K H
Sbjct: 226 GSPGSPSRQAPSSPQPTNLRTQNISIPSDMVGCIIGRGGSKITEIRRLSGSKISIAKAPH 285
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
+ + + I G +KAL + ++L R
Sbjct: 286 DET----GERMFTIVGTPEANEKALFLLYNQLESEKER 319
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
T + +P+ +GC+IG+GGS ITE+RRL+ + I I
Sbjct: 246 TQNISIPSDMVGCIIGRGGSKITEIRRLSGSKISI 280
>gi|432931639|ref|XP_004081713.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Oryzias
latipes]
Length = 343
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDTI------ 70
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ +
Sbjct: 71 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 125
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 126 RESTGAQVQVAGD-MLPNSTERA---VTISGTPEAIIQCVKQICVVMLESPPK 174
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 71/222 (31%)
Query: 133 DSDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R
Sbjct: 7 QSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER--- 59
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 60 IVTITGPTDTIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV--- 100
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
+LRLV P + G +IGKGG+ I ++R
Sbjct: 101 ----------------------------------TLRLVVPASQCGSLIGKGGSKIKEMR 126
Query: 311 QESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR 352
+ +GA ++V D L + + T+S T EA+++
Sbjct: 127 ESTGAQVQV------AGDMLPNSTERAV---TISGTPEAIIQ 159
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 34/188 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDTIFKAFA 75
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 76 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 122
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--E 450
EMR T A +++ + LP + + V ISG +A+IQ + ++ + + +
Sbjct: 123 KEMRESTGAQVQVA-GDMLP---NSTERAVTISG----TPEAIIQCVKQICVVMLESPPK 174
Query: 451 GAVSTFVP 458
GA + P
Sbjct: 175 GATIPYRP 182
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 267 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 301
>gi|386764188|ref|NP_001036268.2| IGF-II mRNA-binding protein, isoform K [Drosophila melanogaster]
gi|383293323|gb|ABI30974.2| IGF-II mRNA-binding protein, isoform K [Drosophila melanogaster]
Length = 631
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 191/426 (44%), Gaps = 70/426 (16%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 112 NQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 171
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y + TNA + + +V + +G E S
Sbjct: 172 HRKENV-GSLEKSITIYGNPENCTNACKR-----------ILEVMQQEAISTNKG-ELSP 218
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 219 ECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVK 276
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-- 253
G L +N SR+++ +++ + S+ + + P + G+ P+
Sbjct: 277 G---------------LIENMSRAENQISTKLRQSYENDLQAMAPQSLM-FPGLHPMAMM 320
Query: 254 -GPYGGYKGDTAGDW----SRSLYSAPR--------DDLSSKEFSLRLVCPVANIGGVIG 300
P G +T+ + S ++ P +DL + L P +G +IG
Sbjct: 321 STPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTY---LYIPNNAVGAIIG 377
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
G+ I I + S A++K+ + + D L + ++ T+ T E + Q EK
Sbjct: 378 TRGSHIRSIMRFSNASLKI--APLDADKPLDQQTERKV---TIVGTPEGQWKAQYMIFEK 432
Query: 361 IERDSGL------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ R+ G + T LLV +S++G +IGKGG + E++R+T + I+ LP+ L
Sbjct: 433 M-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPP 490
Query: 415 ASEDDE 420
+ D+E
Sbjct: 491 SGGDEE 496
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 360 QETTYLYI-PNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 418
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E G +D ++T +LLV S Q+G +
Sbjct: 419 PEG-------------QWKAQYMIFEKMREEGFMCGTDDV----RLTVELLVASSQVGRI 461
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLH 213
IGKGGQ V+ ++ TG+ I++ + P + V I G V+ A +I A L
Sbjct: 462 IGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLS 521
Query: 214 DNP 216
NP
Sbjct: 522 TNP 524
>gi|410914634|ref|XP_003970792.1| PREDICTED: RNA-binding protein Nova-1-like [Takifugu rubripes]
Length = 501
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 20/222 (9%)
Query: 6 NSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
N+ ++ +T + G KR TG++ + F+ + L P GSIIG+GG+ +
Sbjct: 34 NADSRKRPLETPEEEAGCTKRTNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTI 85
Query: 66 KQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAFED--GDKFVSPAQDALFKVH 120
QL+ +T + I++ ++ PG+ ERV + + N + +K Q A
Sbjct: 86 VQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGVHNFIAEKVREMPQSAQKPEP 145
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
++ + + D AK++VP+ G +IGKGG V+ + ++GA +++ +
Sbjct: 146 VSILQPQTTVNPD----RVKQAKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK-- 199
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
P + +V ISGE +KA+ I ++ ++P S L
Sbjct: 200 -PEGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCL 240
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 91/186 (48%), Gaps = 41/186 (22%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E+ L+++ P G +IGKGG I Q+++E+GA IK+ SK+F+ T
Sbjct: 62 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS-------------KSKDFYPGT 108
Query: 343 ------LSATIEAV----------VRLQPRCSEKIERDSGLISFTT---------RLLVP 377
+ T+EA+ VR P+ ++K E S L TT +++VP
Sbjct: 109 TERVCLIQGTVEALNGVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKIIVP 168
Query: 378 TSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQ 437
S G +IGKGG+ + + + A +++ K P+ + + +V ISG+ + + A+
Sbjct: 169 NSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTISGEPEQNRKAVEI 225
Query: 438 VMTRLR 443
++ +++
Sbjct: 226 IVQKIQ 231
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + ++A L E G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 388 ASNGYLNASSPLMASSLLATEKLADGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 447
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I+ R+
Sbjct: 448 RIQISKKGEFIPGTRNRK---VTITGSPAATQAAQYLISQRI 486
>gi|380806987|gb|AFE75369.1| RNA-binding protein Nova-2, partial [Macaca mulatta]
Length = 296
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 16/201 (7%)
Query: 55 GSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAFEDGDKFVSP 111
GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA F++
Sbjct: 1 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHS---FIAE 57
Query: 112 AQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+ + + + L+ + AKL+VP+ G +IGKGG V+ + ++G
Sbjct: 58 KVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSG 117
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL------LA 224
A +++ + P + +V +SGE V KA+ I ++ ++P S L +A
Sbjct: 118 AWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVA 174
Query: 225 SAISNSHSSSGSLVGPTAATP 245
++NS+ + P P
Sbjct: 175 GPVANSNPTGSPYASPADVLP 195
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 19/162 (11%)
Query: 296 GGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKEFFEDTLSATIEAV 350
G +IGKGG I Q+++E+GA IK+ S T CL+ +++ + + + I
Sbjct: 1 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEAL--NAVHSFIAEK 58
Query: 351 VRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
VR P+ K E + L TT +L+VP S G +IGKGG+ + + + A
Sbjct: 59 VREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGA 118
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
+++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 119 WVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 157
>gi|66472276|ref|NP_001018567.1| poly(rC) binding protein 3 [Danio rerio]
gi|63101380|gb|AAH95089.1| Poly(rC) binding protein 3 [Danio rerio]
gi|182890686|gb|AAI65090.1| Pcbp3 protein [Danio rerio]
Length = 241
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 70
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ +
Sbjct: 71 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 125
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 126 RESTGAQVQVAGD-MLPNSTERA---VTISGTPEAIIQCVKQICVVMLESPPK 174
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 71/222 (31%)
Query: 133 DSDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R
Sbjct: 7 QSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER--- 59
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 60 IVTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV--- 100
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
+LRLV P + G +IGKGG+ I ++R
Sbjct: 101 ----------------------------------TLRLVVPASQCGSLIGKGGSKIKEMR 126
Query: 311 QESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR 352
+ +GA ++V D L + + T+S T EA+++
Sbjct: 127 ESTGAQVQV------AGDMLPNSTERAV---TISGTPEAIIQ 159
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 34/188 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 75
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 76 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 122
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--E 450
EMR T A +++ + LP + + V ISG +A+IQ + ++ + + +
Sbjct: 123 KEMRESTGAQVQVA-GDMLP---NSTERAVTISG----TPEAIIQCVKQICVVMLESPPK 174
Query: 451 GAVSTFVP 458
GA + P
Sbjct: 175 GATIPYRP 182
>gi|241956872|ref|XP_002421156.1| RNA binding protein, putative [Candida dubliniensis CD36]
gi|223644499|emb|CAX41315.1| RNA binding protein, putative [Candida dubliniensis CD36]
Length = 533
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 121/335 (36%), Gaps = 87/335 (25%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R CP+++ +I+GR GE + LR +I + E + G ER+V V
Sbjct: 163 RMYCPVKEASTIVGRKGETINHLREKANVRITVSENLKGVPERIVAVK------------ 210
Query: 106 DKFVSPAQDA--LFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
PA++ F + RVI EE + S Q KLL+P IG +IGK G +
Sbjct: 211 ----GPAENVARAFGLITRVILEEPEDEPASITSQQYNLKLLIPHPMIGFIIGKQGLKFR 266
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL----------- 212
I + A+++ ++ LP +D ++ + G + A+ IA +
Sbjct: 267 EIEENSAAKLKAAENP-LPYS---TDRVLSVMGVGDAIHIAVYYIAQVMLEHKEVLKKNK 322
Query: 213 -------------HDN-----------------------------PSRSQH--------- 221
H N P SQH
Sbjct: 323 VVLYNPANYQPTDHQNLGGRQRHPPNNSYNNPMGYQAKLPPFSKPPHHSQHQQSPYNFSM 382
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVGIAPLMG--PYGGYKGDTAGDWSRSLYSAPRDDL 279
+ A+ H + P A +P VG+ P + P Y + + + P
Sbjct: 383 MFQPAVQPQHFGTPVTSNPNAISP-VGMQPSINVPPQNQYTDEFGNTIVGEVITTPPVQA 441
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
+++ + ++IG VIGKGG I IR+ S
Sbjct: 442 GQDKYNQDVFVANSSIGSVIGKGGNNIKHIRETSA 476
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 11/132 (8%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
RDD + LR+ CPV ++G+ G IN +R+++ I V + + ++ V
Sbjct: 154 RDDPTF--IQLRMYCPVKEASTIVGRKGETINHLREKANVRITVSENLKGVPERIVAVKG 211
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS---FTTRLLVPTSRIGCLIGKGGSII 392
+ ++ + R+ E+ E + I+ + +LL+P IG +IGK G
Sbjct: 212 P---AENVARAFGLITRV---ILEEPEDEPASITSQQYNLKLLIPHPMIGFIIGKQGLKF 265
Query: 393 TEMRRLTKANIR 404
E+ + A ++
Sbjct: 266 REIEENSAAKLK 277
>gi|221114013|ref|XP_002155770.1| PREDICTED: poly(rC)-binding protein 3-like [Hydra magnipapillata]
Length = 313
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 121/272 (44%), Gaps = 59/272 (21%)
Query: 55 GSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQD 114
G IIG+ G ++Q+R ++ + I + + ER++ + S E
Sbjct: 18 GGIIGKEGRNIRQMRDESGANINVSGST--GVERILNIKGTSSEV--------------- 60
Query: 115 ALFKVHDRVIAEELR---GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
K R++AE+L+ +++ VT +LLVP+ Q G +IGKGGQ ++ IR +GA
Sbjct: 61 ---KSAVRMVAEKLQEILSGSNNEYVPPVTLRLLVPNSQCGPLIGKGGQRIKEIREASGA 117
Query: 172 QIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSH 231
I I E LP + RS V ++G + + +I + P+R ++ N +
Sbjct: 118 TITI-PSETLPGSSERS---VTLAGSPEALGLCIAKIWDIFEEFPARQNNV--QYFPNMY 171
Query: 232 SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSK-EFSLRLVC 290
S +GP + + G G LS + E +RL
Sbjct: 172 PRS---MGPHQLSVMSGQLSFTG------------------------LSRRSEQKVRL-- 202
Query: 291 PVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
P IG +IGKGG IN+IRQ SGA + V+ S
Sbjct: 203 PSNVIGSLIGKGGCHINEIRQFSGATVHVEES 234
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 19/140 (13%)
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
++ ++ L + + GG+IGK G I Q+R ESGA I V S+ G + ++ +
Sbjct: 1 MAEEKLELHFIILSQDAGGIIGKEGRNIRQMRDESGANINVSGST--GVERILNIKG--- 55
Query: 339 FEDTLSATIEAVVRLQPRCSEKIE------RDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
S+ +++ VR+ +EK++ + + T RLLVP S+ G LIGKGG I
Sbjct: 56 ----TSSEVKSAVRM---VAEKLQEILSGSNNEYVPPVTLRLLVPNSQCGPLIGKGGQRI 108
Query: 393 TEMRRLTKANIRILPKENLP 412
E+R + A I I P E LP
Sbjct: 109 KEIREASGATITI-PSETLP 127
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 115/288 (39%), Gaps = 92/288 (31%)
Query: 144 LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKK 203
++ S G +IGK G+ ++ +R E+GA I + S + + ++ I G +S VK
Sbjct: 10 FIILSQDAGGIIGKEGRNIRQMRDESGANINV-------SGSTGVERILNIKGTSSEVKS 62
Query: 204 ALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDT 263
A+ +A +L Q +L+
Sbjct: 63 AVRMVAEKL-------QEILSG-------------------------------------- 77
Query: 264 AGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
S + Y P +LRL+ P + G +IGKGG I +IR+ SGA I + S +
Sbjct: 78 ----SNNEYVPP--------VTLRLLVPNSQCGPLIGKGGQRIKEIREASGATITIPSET 125
Query: 324 TEGDD---------------CLITVSSKEFFED--TLSATIEAVVRLQPRC--SEKIERD 364
G C+ + + FE+ ++ + PR ++
Sbjct: 126 LPGSSERSVTLAGSPEALGLCIAKI--WDIFEEFPARQNNVQYFPNMYPRSMGPHQLSVM 183
Query: 365 SGLISFT-------TRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
SG +SFT ++ +P++ IG LIGKGG I E+R+ + A + +
Sbjct: 184 SGQLSFTGLSRRSEQKVRLPSNVIGSLIGKGGCHINEIRQFSGATVHV 231
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 31/152 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDE-----T 99
R L P + G +IG+GG+ +K++R + + I I ET+PGS ER VT+ + +
Sbjct: 89 RLLVPNSQCGPLIGKGGQRIKEIREASGATITIPSETLPGSSERSVTLAGSPEALGLCIA 148
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA----------------K 143
++ ++F PA+ + + + G HQ++ K
Sbjct: 149 KIWDIFEEF--PARQNNVQYFPNMYPRSM-------GPHQLSVMSGQLSFTGLSRRSEQK 199
Query: 144 LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
+ +PS+ IG +IGKGG + IR +GA + +
Sbjct: 200 VRLPSNVIGSLIGKGGCHINEIRQFSGATVHV 231
>gi|124021196|gb|ABM88866.1| IGF2 mRNA-binding protein 1 [Danio rerio]
Length = 598
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 95/454 (20%), Positives = 194/454 (42%), Gaps = 73/454 (16%)
Query: 3 GQRNSYGKRSHSQTDYADHG-PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRG 61
G+R YG R S+ G P+K ++ D R L P + +G+IIG+
Sbjct: 170 GRRPGYGPRGTSRQMSPGSGIPSKHQHA------------DIPLRLLVPTQYVGAIIGKE 217
Query: 62 GEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
G ++ + T+SKI + + G+ E+ ++++S + +A
Sbjct: 218 GATIRNITKQTQSKIDVHRKENAGAAEKPISIHSTPEGCSAA------------------ 259
Query: 121 DRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
R+I E + + +D+ +V K+L ++ +G +IGK G+ ++ + +T +I I +
Sbjct: 260 CRMILEIMNQEAKDTKTADEVPLKVLAHNNFVGRLIGKEGRNLKKVEQDTDTKITISPLQ 319
Query: 180 HLPSCALRSDELVQISGEAS-VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLV 238
L V+ S EA + ++ + + +DN +A+ +H G +
Sbjct: 320 DLTLYNPERTITVKGSIEACCLAEQEIMKKVREAYDND------IAAMNQQTHLIPGLNL 373
Query: 239 GPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL-SSKEFSLRLVCPVANIGG 297
G +G + S+ P + +S++ ++ + P +G
Sbjct: 374 G------------AIGLFPPSSAMPPPALGNSVPGPPYGPMGASEQETVHVYIPAQAVGA 421
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IGK G I Q+ + +GA+IK+ + + + ++ EA + Q R
Sbjct: 422 LIGKKGQHIKQLSRFAGASIKIAPAEAPDSKMRMVI---------VTGPPEAQFKAQGRI 472
Query: 358 SEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLP 412
K++ ++ + T + V + G +IGKGG + E++ LT A + ++P+E P
Sbjct: 473 YGKLKEENFFGPKEEVKLETHIKVAAAAAGRVIGKGGKTVNELQNLTAAEV-VVPREQTP 531
Query: 413 KIASEDDEMVQISGDL---DLAKDALIQVMTRLR 443
D +V+I G LA+ + ++T+++
Sbjct: 532 D--EHDQVIVKIIGHFYASQLAQRKIRDILTQVK 563
>gi|432887611|ref|XP_004074938.1| PREDICTED: far upstream element-binding protein 3-like [Oryzias
latipes]
Length = 562
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 153/374 (40%), Gaps = 77/374 (20%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T + P + +G IIG+GGE + +++ ++ KI+I G +R T+ + +
Sbjct: 83 TTEDFKVPDKMVGFIIGKGGEQISRIQQESGCKIQIASDSGGMLDRPCTLTGSPEN---- 138
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
+ A+ L ++ ++ D D +G Q ++L+P++++G VIGKGG+
Sbjct: 139 ------IEQAKRLLSEIIEQCRYGPGFHNDMDGNGSIQ---QMLIPANKVGLVIGKGGET 189
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
++ ++ TG Q+ +++D+ +P+ A D+ ++I+G+ V++A + + D
Sbjct: 190 IKQLQERTGVQMMMIQDDPMPTGA---DKPLRITGDPLKVQQARELVVKLIRDKDQ---- 242
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSS 281
+ GS +G T+
Sbjct: 243 ---GDFRTGRAEFGSKMGGTS--------------------------------------- 260
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK-EFFE 340
L +V P +G +IG+ G +I +I+ ++G I+ D + V + E
Sbjct: 261 ----LDVVVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFKQDDGISPDRVAQVMGQPEHCH 316
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKGGSI 391
+ E V Q R + G + T VP + G +IGKGG
Sbjct: 317 HAVHLINELVQTAQERDGYGVMGRRGRVDCNTGGAGGLQEVTYAVPADKCGLVIGKGGET 376
Query: 392 ITEMRRLTKANIRI 405
I ++ ++A++ +
Sbjct: 377 IKNIKEQSRAHVEL 390
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 16/153 (10%)
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV--DSSSTEGDDCLITVSSK 336
L++++F + P +G +IGKGG I++I+QESG I++ DS C +T S +
Sbjct: 82 LTTEDFKV----PDKMVGFIIGKGGEQISRIQQESGCKIQIASDSGGMLDRPCTLTGSPE 137
Query: 337 --EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITE 394
E + LS IE Q R D ++L+P +++G +IGKGG I +
Sbjct: 138 NIEQAKRLLSEIIE-----QCRYGPGFHNDMDGNGSIQQMLIPANKVGLVIGKGGETIKQ 192
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMVQISGD 427
++ T + ++ + +P A D+ ++I+GD
Sbjct: 193 LQERTGVQMMMIQDDPMPTGA---DKPLRITGD 222
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 15/171 (8%)
Query: 48 LCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN-AFEDGD 106
+ P +G IIGR GE++K+++ D +I+ + S +RV V + + A +
Sbjct: 264 VVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFKQDDGISPDRVAQVMGQPEHCHHAVHLIN 323
Query: 107 KFVSPAQDALFKVHDRVIAEELRGDEDSDGG-----HQVTAKLLVPSDQIGCVIGKGGQI 161
+ V AQ+ D RG D + G +VT VP+D+ G VIGKGG+
Sbjct: 324 ELVQTAQE-----RDGYGVMGRRGRVDCNTGGAGGLQEVT--YAVPADKCGLVIGKGGET 376
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
++NI+ ++ A + + ++ P + + I G ++KA I R+
Sbjct: 377 IKNIKEQSRAHVELQRNP--PPSTDPNVRIFSIRGTPQQLEKARQLIDERI 425
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 110/280 (39%), Gaps = 74/280 (26%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
T VP +G +IGKGG+ + I+ E+G +I QI+ ++
Sbjct: 83 TTEDFKVPDKMVGFIIGKGGEQISRIQQESGCKI-------------------QIASDSG 123
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ C + +N +++ LL+ I GP G+
Sbjct: 124 GMLDRPCTLTGS-PENIEQAKRLLSEIIEQCR------YGP-----------------GF 159
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D G+ S +++ P +G VIGKGG I Q+++ +G + +
Sbjct: 160 HNDMDGNGSIQ----------------QMLIPANKVGLVIGKGGETIKQLQERTGVQMMM 203
Query: 320 --DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRL--- 374
D G D + ++ + E VV+L R ++ + +G F +++
Sbjct: 204 IQDDPMPTGADKPLRITGDPL---KVQQARELVVKL-IRDKDQGDFRTGRAEFGSKMGGT 259
Query: 375 ----LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKEN 410
+VP +G +IG+ G +I +++ A +RI K++
Sbjct: 260 SLDVVVPRFAVGIIIGRNGEMIKKIQ--NDAGVRIQFKQD 297
>gi|149036630|gb|EDL91248.1| similar to Pol(yrC)-binding protein 1 (Alpha-CP1) (hnRNP-E1)
(predicted) [Rattus norvegicus]
Length = 337
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 141/319 (44%), Gaps = 77/319 (24%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSP 111
+++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 4 KEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------------- 47
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKGGQIVQN 164
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKGG ++
Sbjct: 48 ---AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKE 103
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS----- 219
IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+S
Sbjct: 104 IRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 159
Query: 220 -----QHLLAS--------------AISNSHSSSGSLVGPTAATPIVG---IAPL----- 252
Q + AS A H++ P A I G I+PL
Sbjct: 160 MTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKL 219
Query: 253 ------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIG 300
M G+ G + Y A D +S + + L P IG +IG
Sbjct: 220 NQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNLIGCIIG 277
Query: 301 KGGAIINQIRQESGAAIKV 319
+ GA IN+IRQ SGA IK+
Sbjct: 278 RQGANINEIRQMSGAQIKI 296
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 22/121 (18%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ 354
+G +IGK G + +IR+ESGA I + +EG+ C + TL+ A+ +
Sbjct: 6 VGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITLTGPTNAIFKAF 53
Query: 355 PRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIR 404
+K+E D S + + T RL+VP ++ G LIGKGG I E+R T A ++
Sbjct: 54 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 113
Query: 405 I 405
+
Sbjct: 114 V 114
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 127 ELRGDEDS-DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
E++G S D Q T +L +P++ IGC+IG+ G + IR +GAQI+I
Sbjct: 247 EVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANP-----VE 301
Query: 186 LRSDELVQISGEASVVKKALCQIASRL 212
S V I+G A+ + A I +RL
Sbjct: 302 GSSGRQVTITGSAASISLAQYLINARL 328
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTV 92
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 82 RLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITI 129
>gi|115496720|ref|NP_001070027.1| insulin-like growth factor 2 mRNA-binding protein 1 [Danio rerio]
gi|123908308|sp|Q08CK7.1|IF2B1_DANRE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=IGF-II mRNA-binding protein 1; AltName: Full=VICKZ
family member 1
gi|115313169|gb|AAI24197.1| Insulin-like growth factor 2 mRNA binding protein 1 [Danio rerio]
gi|182891894|gb|AAI65463.1| Igf2bp1 protein [Danio rerio]
Length = 598
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 95/454 (20%), Positives = 194/454 (42%), Gaps = 73/454 (16%)
Query: 3 GQRNSYGKRSHSQTDYADHG-PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRG 61
G+R YG R S+ G P+K ++ D R L P + +G+IIG+
Sbjct: 170 GRRPGYGPRGTSRQMSPGSGIPSKHQHA------------DIPLRLLVPTQYVGAIIGKE 217
Query: 62 GEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
G ++ + T+SKI + + G+ E+ ++++S + +A
Sbjct: 218 GATIRNITKQTQSKIDVHRKENAGAAEKPISIHSTPEGCSAA------------------ 259
Query: 121 DRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
R+I E + + +D+ +V K+L ++ +G +IGK G+ ++ + +T +I I +
Sbjct: 260 CRMILEIMNQEAKDTKTADEVPLKVLAHNNFVGRLIGKEGRNLKKVEQDTDTKITISPLQ 319
Query: 180 HLPSCALRSDELVQISGEAS-VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLV 238
L V+ S EA + ++ + + +DN +A+ +H G +
Sbjct: 320 DLTLYNPERTITVKGSIEACCLAEQEIMKKVREAYDND------IAAMNQQTHLIPGLNL 373
Query: 239 GPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL-SSKEFSLRLVCPVANIGG 297
G +G + S+ P + +S++ ++ + P +G
Sbjct: 374 G------------AIGLFPPSSAMPPPALGNSVPGPPYGPMGASEQETVHVYIPAQAVGA 421
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IGK G I Q+ + +GA+IK+ + + + ++ EA + Q R
Sbjct: 422 LIGKKGQHIKQLSRFAGASIKIAPAEAPDSKMRMVI---------VTGPPEAQFKAQGRI 472
Query: 358 SEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLP 412
K++ ++ + T + V + G +IGKGG + E++ LT A + ++P+E P
Sbjct: 473 YGKLKEENFFGPKEEVKLETHIKVAAAAAGRVIGKGGKTVNELQNLTAAEV-VVPREQTP 531
Query: 413 KIASEDDEMVQISGDL---DLAKDALIQVMTRLR 443
D +V+I G LA+ + ++T+++
Sbjct: 532 D--EHDQVIVKIIGHFYASQLAQRKIRDILTQVK 563
>gi|270001418|gb|EEZ97865.1| hypothetical protein TcasGA2_TC000237 [Tribolium castaneum]
Length = 415
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 13/171 (7%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+D S+ ++RL+ +G +IGK G I+ + R+ESGA I + S +T S+
Sbjct: 8 NDDSNVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGSTN 67
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSG-----LISFTTRLLVPTSRIGCLIGKGGSI 391
F+ A + + CS+ + +SG T RL+VP S+ G LIGKGGS
Sbjct: 68 AIFK----AFTLICKKFEEWCSQFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSK 123
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
I E+R +T A+I++ E LP + + V ISG + + + T +
Sbjct: 124 IKEIREVTGASIQVA-SEMLP---NSTERAVTISGTGEAITQCIYHICTVM 170
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 34/177 (19%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIVK+ R ++ +KI I + GS ER+VTV +++
Sbjct: 24 KEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTGSTN------------- 67
Query: 111 PAQDALFKVHDRV---IAEELRGDEDSDGGHQ------VTAKLLVPSDQIGCVIGKGGQI 161
A+FK + E +D + G +T +L+VP+ Q G +IGKGG
Sbjct: 68 ----AIFKAFTLICKKFEEWCSQFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSK 123
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ IR TGA I++ E LP+ R+ V ISG + + + I + + ++P +
Sbjct: 124 IKEIREVTGASIQV-ASEMLPNSTERA---VTISGTGEAITQCIYHICTVMLESPPK 176
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 57/189 (30%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+ D +T +L++ ++G +IGK G+IV+ R E+GA+I I SC R +V
Sbjct: 8 NDDSNVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG----SCPER---IV 60
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I + + S+ Q + +S GS V
Sbjct: 61 TVTGSTNAIFKAFTLICKKFEEWCSQFQDI---------NSGGSGV-------------- 97
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
PR + +LRL+ P + G +IGKGG+ I +IR+
Sbjct: 98 ----------------------PRPPI-----TLRLIVPASQCGSLIGKGGSKIKEIREV 130
Query: 313 SGAAIKVDS 321
+GA+I+V S
Sbjct: 131 TGASIQVAS 139
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + VP IGC+IGKGG+ I E+R+++ A IRI ++ + + D + ISG+ D
Sbjct: 320 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDD--RESGVTDRTITISGNPDA 377
Query: 431 AKDALIQVMTRLRANL 446
AL Q + +R ++
Sbjct: 378 V--ALAQYLINMRISM 391
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 129 RGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRS 188
R ++S+ Q T ++ VP++ IGC+IGKGG + IR +GA IRI + S +
Sbjct: 311 RNQQNSN---QQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDDRESGV--T 365
Query: 189 DELVQISGEASVVKKALCQIASRL 212
D + ISG V A I R+
Sbjct: 366 DRTITISGNPDAVALAQYLINMRI 389
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV 92
R + P + GS+IG+GG +K++R T + I++ E +P S ER VT+
Sbjct: 105 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTI 152
>gi|403417714|emb|CCM04414.1| predicted protein [Fibroporia radiculosa]
Length = 420
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 122/266 (45%), Gaps = 44/266 (16%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIG+GG V ++R + +++ + E++PG+ ER++ V D A
Sbjct: 134 IIGKGGSHVNEIREKSSARVMVSESIPGNPERILNVSGPLD--------------AVSKA 179
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT K ++P+ ++G VIGKGG ++ I+ +GA++
Sbjct: 180 FGLIVRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARLN-A 238
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSH---SS 233
+ LP R ++ +SG A + A I + L + R L S ++S+ SS
Sbjct: 239 SEGMLPGSTER---VLSVSGVADAIHIATYYIGNILIEANER----LPSYNNSSYYRPSS 291
Query: 234 SGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVA 293
+ P ++ + G + Y G + G P L +++ + P
Sbjct: 292 NSRRPPPNGSSYVPGYS------NTYPGSSHG---------PPQQLQTQQ----IYIPND 332
Query: 294 NIGGVIGKGGAIINQIRQESGAAIKV 319
+G +IGKGG+ IN+IR S + IK+
Sbjct: 333 LVGCIIGKGGSKINEIRHMSASNIKI 358
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 95/207 (45%), Gaps = 31/207 (14%)
Query: 37 IIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSA 95
+ G +++ P ++GS+IG+GG +K+++ + +++ E +PGS ERV++V
Sbjct: 197 VPGSRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARLNASEGMLPGSTERVLSVSGV 256
Query: 96 SDETN---------AFEDGDKFVSPAQDALFKVHDRVIAEELRGDE-----------DSD 135
+D + E ++ S + ++ G S
Sbjct: 257 ADAIHIATYYIGNILIEANERLPSYNNSSYYRPSSNSRRPPPNGSSYVPGYSNTYPGSSH 316
Query: 136 GGHQ--VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL-------PSCAL 186
G Q T ++ +P+D +GC+IGKGG + IR + + I+I++ + P+ A
Sbjct: 317 GPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASNIKIMEPGAVGVGMNGAPAPAG 376
Query: 187 RSDE-LVQISGEASVVKKALCQIASRL 212
E LV I+G+ + ++ A+ + RL
Sbjct: 377 GEGERLVVITGQPANIQMAVQLLYHRL 403
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 40/163 (24%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVS----- 334
S+ +++ + P + +G VIGKGGA I +I+ SGA + G + +++VS
Sbjct: 200 SRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARLNASEGMLPGSTERVLSVSGVADA 259
Query: 335 ---SKEFFEDTLSATIEAVVRL---------QPRCSEKIERDSGLISF------------ 370
+ + + L IEA RL +P + + +G
Sbjct: 260 IHIATYYIGNIL---IEANERLPSYNNSSYYRPSSNSRRPPPNGSSYVPGYSNTYPGSSH 316
Query: 371 -------TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
T ++ +P +GC+IGKGGS I E+R ++ +NI+I+
Sbjct: 317 GPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASNIKIM 359
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 9/109 (8%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IGKGG+ +N+IR++S A + V S + ++ VS D +S +VR R
Sbjct: 134 IIGKGGSHVNEIREKSSARVMVSESIPGNPERILNVSGP---LDAVSKAFGLIVR---RI 187
Query: 358 S-EKIERDS--GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
+ E ++ S G + T + ++P SR+G +IGKGG+ I E++ + A +
Sbjct: 188 NDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARL 236
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAK 432
R L+ T +IGKGGS + E+R K++ R++ E++P + ++ +SG LD
Sbjct: 123 RCLIVTQDASIIIGKGGSHVNEIRE--KSSARVMVSESIP---GNPERILNVSGPLDAVS 177
Query: 433 DALIQVMTRLRANLFDR 449
A ++ R+ FD+
Sbjct: 178 KAFGLIVRRINDEPFDK 194
>gi|326430629|gb|EGD76199.1| hypothetical protein PTSG_00905 [Salpingoeca sp. ATCC 50818]
Length = 947
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 160/377 (42%), Gaps = 63/377 (16%)
Query: 54 IGSIIGRGGEIVKQLRIDTKSKIRIGETVP---GSEERVVTVYSASDETNAFEDGDKFVS 110
+G+IIGRGG ++QL +++++ + P RV S ++ AF
Sbjct: 197 VGAIIGRGGANIRQLSQVSRARVELERRDPHLGAVGRRVFIDGSLNNTVEAFR------- 249
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSET 169
A L +D EL G+E + ++T+ ++++P + +G +IG+ G ++ I +
Sbjct: 250 -ALVQLMADND----VELNGEEPVEAEDRITSIQMMIPGEMVGHLIGRAGASIKYITETS 304
Query: 170 GAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISN 229
GA I +L ++ + +V+I G + A + + + RS ++
Sbjct: 305 GAGIELLPLQY--PANMSPVRIVKIEGTPRQLTHAFALMLRKFSNAMRRSMEVMRGPPMM 362
Query: 230 SHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLV 289
P A P V P GP + AP + ++ +
Sbjct: 363 GMMQQQQQQMPGMAPPYV---PGYGP-------------GPMMMAPVEVITVR------- 399
Query: 290 CPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFED--TLSATI 347
P ++G +IG+GG+ I + +E+GA I++ +S GDD +E E + T
Sbjct: 400 VPAWSVGALIGRGGSNIKHMMEETGAEIRIQNS---GDDV------EEPLERDCVVRGTT 450
Query: 348 EAVVRLQPRCSEKIERDSGLIS-----------FTTRLLVPTSRIGCLIGKGGSIITEMR 396
E VR +++ + ++ F + VP +++G +IG+GG+ I +++
Sbjct: 451 EQQVRAHALIFRRMQDEQARLNIPPTDPRSNDLFPVVMEVPAAKVGRVIGRGGATIRDIQ 510
Query: 397 RLTKANIRILPKENLPK 413
+ T + + E P+
Sbjct: 511 QKTGVGVEVQQNEENPE 527
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 18/158 (11%)
Query: 259 YKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIK 318
+ G GD R+ PR D++ F ++LV + +G +IG+GGA I Q+ Q S A ++
Sbjct: 164 FTGIRFGDTRRA--RKPRPDMALP-FPVQLVVRPSLVGAIIGRGGANIRQLSQVSRARVE 220
Query: 319 VDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRL---------QPRCSEKIERDSGLIS 369
++ D L V + F + +L+ T+EA L + E +E + + S
Sbjct: 221 LERR----DPHLGAVGRRVFIDGSLNNTVEAFRALVQLMADNDVELNGEEPVEAEDRITS 276
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILP 407
++++P +G LIG+ G+ I + + A I +LP
Sbjct: 277 I--QMMIPGEMVGHLIGRAGASIKYITETSGAGIELLP 312
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 23/163 (14%)
Query: 49 CPIRKIGSIIGRGGEIVKQLRIDTKSKIRI---GETVPGSEERVVTVYSASDETNAFEDG 105
P +G++IGRGG +K + +T ++IRI G+ V ER V +++
Sbjct: 400 VPAWSVGALIGRGGSNIKHMMEETGAEIRIQNSGDDVEEPLERDCVVRGTTEQQ------ 453
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGD---EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIV 162
A +F+ R+ E+ R + D + VP+ ++G VIG+GG +
Sbjct: 454 ----VRAHALIFR---RMQDEQARLNIPPTDPRSNDLFPVVMEVPAAKVGRVIGRGGATI 506
Query: 163 QNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKAL 205
++I+ +TG + + ++E P ++ V + G V+ AL
Sbjct: 507 RDIQQKTGVGVEVQQNEENPE----ANAAVMLHGSYRSVQAAL 545
>gi|440907813|gb|ELR57910.1| Poly(rC)-binding protein 1 [Bos grunniens mutus]
Length = 356
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 143/325 (44%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 172
Query: 219 S----------QHLLAS--------------AISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + AS A H++ P A I G I+P
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISP 232
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 233 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNL 290
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ G+ IN+IRQ SGA IK+
Sbjct: 291 IGCIIGRQGSNINEIRQMSGAQIKI 315
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + +C R ++ ++G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG----NCPER---IITLTGPTN 66
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 67 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 93
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 94 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 62 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 127 ELRGDEDS-DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
E++G S D Q T +L +P++ IGC+IG+ G + IR +GAQI+I
Sbjct: 266 EVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGSNINEIRQMSGAQIKIANP-----VE 320
Query: 186 LRSDELVQISGEASVVKKALCQIASRL 212
S V I+G A+ + A I +RL
Sbjct: 321 GSSGRQVTITGSAASISLAQYLINARL 347
>gi|26336871|dbj|BAC32119.1| unnamed protein product [Mus musculus]
Length = 577
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 171/391 (43%), Gaps = 55/391 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S +
Sbjct: 193 PVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
+ S + L +H +D+ +V K+L ++ +G +IGK
Sbjct: 253 CS---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
G+ ++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 296 GRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE-- 349
Query: 217 SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
++ +A+ SH G + AA + + P A +S S AP
Sbjct: 350 -AYENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPE 404
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+ +++ P +G +IGK G I Q+ + + A+IK+ T + V
Sbjct: 405 QGM------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVV--- 455
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSI 391
++ EA + Q R K++ ++ + T + VP S G +IGKGG
Sbjct: 456 ------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKT 509
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+ E++ LT A + ++P++ P E+D+++
Sbjct: 510 VNELQNLTAAEV-VVPRDQTP---DENDQVI 536
>gi|383862495|ref|XP_003706719.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Megachile
rotundata]
Length = 560
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 90/171 (52%), Gaps = 23/171 (13%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIVK+ R ++ +KI I + GS ER+VTV ++ + F+
Sbjct: 27 KEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTGPTN--SIFKAFTLICK 81
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGG---HQVTAKLLVPSDQIGCVIGKGGQIVQNIRS 167
++ + HD S GG +T +L+VP+ Q G +IGKGG ++ IR
Sbjct: 82 KFEEWCSQFHDI----------QSGGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIRE 131
Query: 168 ETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
TGA I++ E LP+ R+ V ISG + + + + I + ++P +
Sbjct: 132 VTGASIQV-ASEMLPNSTERA---VTISGTSEAITQCIYHICCVMLESPPK 178
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 12/154 (7%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+D S ++RL+ +G +IGK G I+ + R+ESGA I + S +T +
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTN 70
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSG----LISFTTRLLVPTSRIGCLIGKGGSII 392
F+ A + + CS+ + SG T RL+VP S+ G LIGKGGS I
Sbjct: 71 SIFK----AFTLICKKFEEWCSQFHDIQSGGGVPRPPITLRLIVPASQCGSLIGKGGSKI 126
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
E+R +T A+I++ E LP + + V ISG
Sbjct: 127 KEIREVTGASIQVA-SEMLP---NSTERAVTISG 156
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 58/182 (31%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV+ R E+GA+I I SC R +V ++G +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG----SCPER---IVTVTGPTN 70
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I + + S + S G
Sbjct: 71 SIFKAFTLICKKFEE--------WCSQFHDIQSGGG------------------------ 98
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
PR ++ LRL+ P + G +IGKGG+ I +IR+ +GA+I+V
Sbjct: 99 --------------VPRPPIT-----LRLIVPASQCGSLIGKGGSKIKEIREVTGASIQV 139
Query: 320 DS 321
S
Sbjct: 140 AS 141
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T ++ VP++ IGC+IGKGG + IR +GA IRI E A +D + I+G
Sbjct: 367 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA--TDRTITITGNPDA 424
Query: 201 VKKA--LCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP----TAATPIVGIAPL 252
V A L ++ L +Q+ + ++G+ P T A+P+ PL
Sbjct: 425 VALAQYLISMSVELQKANLEAQNTQTPGSGTTPGATGASASPSNTTTTASPLASAIPL 482
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + VP IGC+IGKGG+ I E+R+++ A IRI E + D + I+G+ D
Sbjct: 367 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDA 424
Query: 431 AKDA--LIQVMTRL-RANL 446
A LI + L +ANL
Sbjct: 425 VALAQYLISMSVELQKANL 443
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + GS+IG+GG +K++R T + I++ E +P S ER VT+ S+
Sbjct: 107 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSE 159
>gi|383862493|ref|XP_003706718.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Megachile
rotundata]
Length = 466
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 90/171 (52%), Gaps = 23/171 (13%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIVK+ R ++ +KI I + GS ER+VTV ++ + F+
Sbjct: 27 KEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTGPTN--SIFKAFTLICK 81
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGG---HQVTAKLLVPSDQIGCVIGKGGQIVQNIRS 167
++ + HD S GG +T +L+VP+ Q G +IGKGG ++ IR
Sbjct: 82 KFEEWCSQFHDI----------QSGGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIRE 131
Query: 168 ETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
TGA I++ E LP+ R+ V ISG + + + + I + ++P +
Sbjct: 132 VTGASIQV-ASEMLPNSTERA---VTISGTSEAITQCIYHICCVMLESPPK 178
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 12/154 (7%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+D S ++RL+ +G +IGK G I+ + R+ESGA I + S +T +
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTN 70
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSG----LISFTTRLLVPTSRIGCLIGKGGSII 392
F+ A + + CS+ + SG T RL+VP S+ G LIGKGGS I
Sbjct: 71 SIFK----AFTLICKKFEEWCSQFHDIQSGGGVPRPPITLRLIVPASQCGSLIGKGGSKI 126
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
E+R +T A+I++ E LP + + V ISG
Sbjct: 127 KEIREVTGASIQVA-SEMLP---NSTERAVTISG 156
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 58/182 (31%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV+ R E+GA+I I SC R +V ++G +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG----SCPER---IVTVTGPTN 70
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I + + S + S G
Sbjct: 71 SIFKAFTLICKKFEE--------WCSQFHDIQSGGG------------------------ 98
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
PR + +LRL+ P + G +IGKGG+ I +IR+ +GA+I+V
Sbjct: 99 --------------VPRPPI-----TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQV 139
Query: 320 DS 321
S
Sbjct: 140 AS 141
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T ++ VP++ IGC+IGKGG + IR +GA IRI E A +D + I+G
Sbjct: 273 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA--TDRTITITGNPDA 330
Query: 201 VKKA--LCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP----TAATPIVGIAPL 252
V A L ++ L +Q+ + ++G+ P T A+P+ PL
Sbjct: 331 VALAQYLISMSVELQKANLEAQNTQTPGSGTTPGATGASASPSNTTTTASPLASAIPL 388
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + VP IGC+IGKGG+ I E+R+++ A IRI E + D + I+G+ D
Sbjct: 273 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDA 330
Query: 431 AKDALIQVMTRLRANL 446
AL Q + + L
Sbjct: 331 V--ALAQYLISMSVEL 344
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + GS+IG+GG +K++R T + I++ E +P S ER VT+ S+
Sbjct: 107 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSE 159
>gi|291402366|ref|XP_002717547.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 334
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 140/314 (44%), Gaps = 48/314 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK +R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVK-MREESGARINISEG--NCPERIITLAGPTN-------- 65
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 66 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 115
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA-SRLHDNPS 217
G ++ IR TGAQ+++ D LP+ R+ + I K +C + L +P
Sbjct: 116 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 174
Query: 218 R----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIA------PLMGPYGGYK 260
+ S + A +++ G P T + +A P+ G+
Sbjct: 175 KGVTIPYWPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFS 234
Query: 261 GDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
G + Y A D S++ S L P IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 235 GIESSSPEVKGYWAGLDA-SAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA 293
Query: 321 SSSTEGDDCLITVS 334
+ D +T++
Sbjct: 294 NPVEGSTDRQVTIT 307
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 89/230 (38%), Gaps = 68/230 (29%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY----------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 100 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVK 159
Query: 94 ------------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRVI 124
S F G + Q A L K+H +
Sbjct: 160 QICVVMLETLSQSPPKGVTIPYWPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAM 219
Query: 125 AEE----------LRGDEDS-----------DGGHQVTA-KLLVPSDQIGCVIGKGGQIV 162
+ G E S D Q T+ +L +P+D IGC+IG+ G +
Sbjct: 220 QQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKI 279
Query: 163 QNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
IR +GAQI+I +D V I+G A+ + A I RL
Sbjct: 280 NEIRQMSGAQIKIANP-----VEGSTDRQVTITGSAASISLAQYLINVRL 324
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 63/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVK-MREESGARINISEG----NCPER---II 58
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 59 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 92
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 93 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 125
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 126 TGAQVQV 132
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 23/132 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESV-KMREESGARINI----SEGN-CPERI-------ITL 60
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 61 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 120
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 121 EIRESTGAQVQV 132
>gi|242048332|ref|XP_002461912.1| hypothetical protein SORBIDRAFT_02g010550 [Sorghum bicolor]
gi|241925289|gb|EER98433.1| hypothetical protein SORBIDRAFT_02g010550 [Sorghum bicolor]
Length = 579
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 114/241 (47%), Gaps = 22/241 (9%)
Query: 109 VSPAQDALFKVHDRVIAEELRGDEDSDGGH---QVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+SPAQ+AL V D A G+E++ G +VT LLV +D++ G+G +++ I
Sbjct: 107 LSPAQEALVAVIDTQGALYCAGEEEARGKAPPGRVTCLLLVDADRLEASAGRG--VMERI 164
Query: 166 RSETGAQIRILKDEH--LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLL 223
E GA +R+ E LP +E+V+I+G+ + V+KAL ++S L + L
Sbjct: 165 ALEAGADVRVAMWEEGALPPRGQPPEEVVEITGDRTAVRKALVALSSCLQGD-------L 217
Query: 224 ASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL---- 279
S ++ + P A++ + G P MG S + P +
Sbjct: 218 PIGNSTAYDKKEGSILPWASSEVPG--PNMGTSCSEVSTEFAQGSVAKTHCPEGNTGYVQ 275
Query: 280 --SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
+ ++ S RL+ P GG+IGK G II I E+GA I V + T + +IT+ + E
Sbjct: 276 SKTLQQVSFRLLLPTYLAGGLIGKRGLIIKGIEDETGACIDVGAPVTGCKERVITICALE 335
Query: 338 F 338
Sbjct: 336 I 336
>gi|363543195|ref|NP_001241811.1| RNA-binding protein Nova-1 [Zea mays]
gi|195659123|gb|ACG49029.1| RNA-binding protein Nova-1 [Zea mays]
Length = 344
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 147/347 (42%), Gaps = 49/347 (14%)
Query: 30 GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSE 86
GDD+++ I R+L G IIG+GG + + + ++I++ E PG+
Sbjct: 33 GDDKEKPI------HLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTN 86
Query: 87 ERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+R++ V E A+ + ++++AE G+E ++ + +L+V
Sbjct: 87 DRIIMVSGLFGEV-------------MKAMELILEKLLAE---GEEFNEAEARPKVRLVV 130
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALC 206
P++ G +IGKGG +++ E+ A I+I ++ + D LV ++G A+
Sbjct: 131 PNNSCGGIIGKGGATIKSFIEESHAGIKISPQDN--NYVGLHDRLVTVTGTFDNQMNAID 188
Query: 207 QIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM--------GPYGG 258
I +L S H A+ +S+ +G P+ + P + GP G
Sbjct: 189 LILKKL----SEDVHYPAN-LSSPFPYAGLTFPSYPGVPVGYMIPQVPYNNAVNYGPNNG 243
Query: 259 YKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVA--NIGGVIGKGGAIINQIRQESGAA 316
Y G + + S P +S E L +A +IG V+G+ G I +I Q SGA
Sbjct: 244 Y----GGRYQNNKPSTPMRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEIIQASGAR 299
Query: 317 IKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIER 363
IK+ S GD T K T A A + R S ER
Sbjct: 300 IKI---SDRGDFISGTSDRKVTITGTSEAIRTAESMIMQRVSASSER 343
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 10/168 (5%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS---TEGDDCLITVS 334
D K LR + A+ G +IGKGG+ IN + +SGA I++ S +D +I VS
Sbjct: 34 DDKEKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVS 93
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITE 394
F + + A +E + L+ +E E + RL+VP + G +IGKGG+ I
Sbjct: 94 G--LFGEVMKA-MELI--LEKLLAEGEEFNEAEARPKVRLVVPNNSCGGIIGKGGATIKS 148
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
+ A I+I P++N D +V ++G D +A+ ++ +L
Sbjct: 149 FIEESHAGIKISPQDN--NYVGLHDRLVTVTGTFDNQMNAIDLILKKL 194
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSD 189
+E D + + LV + GC+IGKGG + + +S++GA+I++ + E P +D
Sbjct: 31 EEGDDKEKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGT---ND 87
Query: 190 ELVQISGEASVVKKALCQIASRL 212
++ +SG V KA+ I +L
Sbjct: 88 RIIMVSGLFGEVMKAMELILEKL 110
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 10/105 (9%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV---DSSSTEGDDCLITVSSKEFFEDT 342
+RLV P + GG+IGKGGA I +ES A IK+ D++ D L+TV+ F++
Sbjct: 126 VRLVVPNNSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTVTGT--FDNQ 183
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLIS-FTTRLLVPTSRIGCLIG 386
++A I+ +++ + SE + + L S F L S G +G
Sbjct: 184 MNA-IDLILK---KLSEDVHYPANLSSPFPYAGLTFPSYPGVPVG 224
>gi|449449385|ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
Length = 326
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 126/283 (44%), Gaps = 42/283 (14%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSASDET 99
T R+L GS+IG+GG + + + ++I++ E PG+ +R++ V + +E
Sbjct: 35 TYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSINE- 93
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAE---ELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
+ K + V+A+ EL +E D + +L+VP G +IG
Sbjct: 94 ----------------ILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG 137
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KGG +++ ++ A I+I ++ + +D LV +SG +A I S+L ++P
Sbjct: 138 KGGSTIKSFIEDSQAGIKISPQDN--NYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDP 195
Query: 217 SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
+Q + + PT+ + + G G ++ + S + R
Sbjct: 196 HYTQSM-----------NYPFSYPTSFNAMNYGSNGGGTGGRFQNNKPDTRSSEIVQEER 244
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
++ SL + +IG V+G+GG I +I Q SGA IK+
Sbjct: 245 NN------SLTIGVSDGHIGLVVGRGGRNILEISQASGARIKI 281
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 28/178 (15%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
D K +R + A G VIGKGG+ IN + +SGA I++ + E
Sbjct: 29 DNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRN-------------HE 75
Query: 338 FFEDT------LSATIEAVVRLQPRCSEKI-------ERDSGLISFTTRLLVPTSRIGCL 384
FF T +S +I +++ K+ E D RL+VP S G +
Sbjct: 76 FFPGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAI 135
Query: 385 IGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
IGKGGS I ++A I+I P++N + D +V +SG ++ A ++++L
Sbjct: 136 IGKGGSTIKSFIEDSQAGIKISPQDN--NYMASTDRLVTLSGTIEEQMRATDLIVSKL 191
>gi|47209955|emb|CAF90944.1| unnamed protein product [Tetraodon nigroviridis]
Length = 164
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 91/175 (52%), Gaps = 31/175 (17%)
Query: 51 IRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVS 110
++++GSIIG+ GE VK++R ++ ++I I E S ER+VT+ A++
Sbjct: 5 LQEVGSIIGKKGETVKKIREESGARINISEG--SSPERIVTITGATE------------- 49
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKGGQIVQ 163
A+F+ +IA++ D ++ + VT +L+ P Q G +IGKGG ++
Sbjct: 50 ----AIFRTFA-MIAQKFEEDINAAMSNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIK 104
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
IR TGAQ+++ D LP R+ V ISG + + + I S + ++P +
Sbjct: 105 EIRETTGAQVQVAGD-MLPDSTERA---VTISGTPQAITQCVRHICSVMLESPPK 155
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 22/121 (18%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ 354
+G +IGK G + +IR+ESGA I + +EG SS E T++ EA+ R
Sbjct: 8 VGSIIGKKGETVKKIREESGARINI----SEG-------SSPERI-VTITGATEAIFRTF 55
Query: 355 PRCSEKIERD-------SGLIS---FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIR 404
++K E D S + S T RL+ P S+ G LIGKGGS I E+R T A ++
Sbjct: 56 AMIAQKFEEDINAAMSNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQ 115
Query: 405 I 405
+
Sbjct: 116 V 116
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 60/171 (35%)
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI 208
++G +IGK G+ V+ IR E+GA+I I S + +V I+G + + I
Sbjct: 6 QEVGSIIGKKGETVKKIREESGARINI-------SEGSSPERIVTITGATEAIFRTFAMI 58
Query: 209 ASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWS 268
A + ++ + +A+SNS+ +S V
Sbjct: 59 AQKFEED-------INAAMSNSNVTSKPPV------------------------------ 81
Query: 269 RSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+LRLV P + G +IGKGG+ I +IR+ +GA ++V
Sbjct: 82 ----------------TLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQV 116
>gi|332023471|gb|EGI63714.1| Far upstream element-binding protein 1 [Acromyrmex echinatior]
Length = 731
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 166/395 (42%), Gaps = 91/395 (23%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFV 109
P + +G IIGRGGE + +L+ +T KI++ G ERV T+ + + N
Sbjct: 108 PDKMVGLIIGRGGEQITRLQTETGCKIQMAPESGGLPERVCTLTGSREAVNR-------- 159
Query: 110 SPAQDALFKVHDRVIAEELRGDED------SDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
A++ + + ++ E GD + GH ++++P ++G +IGKGG+ ++
Sbjct: 160 --AKELVLSIVNQRSRSEGIGDMNMSGSGSGMMGHPGFVEIMIPGPKVGLIIGKGGETIK 217
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLL 223
++ ++GA++ ++++ + ++ ++I+G+ V+ A Q+ L +
Sbjct: 218 QLQEKSGAKMVVIQE----GPSQEQEKPLRITGDPQKVEYAK-QLVYEL---------IA 263
Query: 224 ASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR--SLYSAPRDDLSS 281
I H G AT D G++S P +
Sbjct: 264 EKEIQMFHR------GGRGAT-----------------DRTGNYSNDSGFNHGP-----A 295
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD---DCLITVSSK-- 336
+ ++ P A +G VIGKGG +I +I+ ESGA ++ EG CL++ +
Sbjct: 296 NSDGVEVLVPRAAVGVVIGKGGDMIKKIQAESGAKVQFQQGREEGPGDRKCLLSGKHQAV 355
Query: 337 EFFEDTLSATIEAVVRLQ------------PRCS------------EKIERDSGLIS--F 370
E + I++V+R PR + R G +
Sbjct: 356 EQARQRIQELIDSVMRRDDGRNNMGGRGSGPRGNGFGGNRNPNEYGTWDRRQGGPMQDKI 415
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
T VP+S+ G +IGKGG I ++ + T A+ +
Sbjct: 416 ETTFTVPSSKCGIIIGKGGETIKQINQQTGAHCEL 450
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 137/319 (42%), Gaps = 70/319 (21%)
Query: 48 LCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEE-----------------RVV 90
+ P K+G IIG+GGE +KQL+ + +K+ + + P E+ ++V
Sbjct: 199 MIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQLV 258
Query: 91 TVYSASDETNAFEDG-----DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLL 145
A E F G D+ + + D+ F G +SDG ++L
Sbjct: 259 YELIAEKEIQMFHRGGRGATDRTGNYSNDSGFN----------HGPANSDG-----VEVL 303
Query: 146 VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVVKKA 204
VP +G VIGKGG +++ I++E+GA+++ + E P D +SG+ V++A
Sbjct: 304 VPRAAVGVVIGKGGDMIKKIQAESGAKVQFQQGREEGP-----GDRKCLLSGKHQAVEQA 358
Query: 205 LCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG-DT 263
+I Q L+ S + + ++ G G P +GG + +
Sbjct: 359 RQRI-----------QELIDSVMRRDDGRN-NMGG-------RGSGPRGNGFGGNRNPNE 399
Query: 264 AGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD--S 321
G W R P D F++ P + G +IGKGG I QI Q++GA ++D +
Sbjct: 400 YGTWDRRQ-GGPMQDKIETTFTV----PSSKCGIIIGKGGETIKQINQQTGAHCELDRRN 454
Query: 322 SSTEGDDCLITVSSKEFFE 340
S E + I + E E
Sbjct: 455 QSNENEKIFIIRGNPEQVE 473
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 129/277 (46%), Gaps = 37/277 (13%)
Query: 198 ASVVKKALCQIASRLHDNPSRSQH----LLASAISNSHSSSGSLVGPTAATPIVGIAPLM 253
A+ +++A QIA+++ NP +Q+ L + +S + A P++GI
Sbjct: 20 AAALQRAK-QIAAKI--NPGGAQNNQDSKLKRPLEDSSEPEAKKMASLVADPLIGI--RG 74
Query: 254 GPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQES 313
GP G GD++G +R S P + +++ + P +G +IG+GG I +++ E+
Sbjct: 75 GPAGNSIGDSSGQGARPPSSNPLCSMCNEDIRV----PDKMVGLIIGRGGEQITRLQTET 130
Query: 314 GAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI------------ 361
G I++ S + + T++ + + ++V + R SE I
Sbjct: 131 GCKIQMAPESGGLPERVCTLTGSREAVNRAKELVLSIVNQRSR-SEGIGDMNMSGSGSGM 189
Query: 362 ERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEM 421
G + +++P ++G +IGKGG I +++ + A + ++ + + E ++
Sbjct: 190 MGHPGFV----EIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQE----GPSQEQEKP 241
Query: 422 VQISGD---LDLAKDALIQVMTRLRANLFDREGAVST 455
++I+GD ++ AK + +++ +F R G +T
Sbjct: 242 LRITGDPQKVEYAKQLVYELIAEKEIQMFHRGGRGAT 278
>gi|326921878|ref|XP_003207181.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-like, partial [Meleagris gallopavo]
Length = 503
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 177/400 (44%), Gaps = 63/400 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI I + G+ E+ +T++S + +
Sbjct: 117 DVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCS 176
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
++I E ++ + +D+ ++ K+L ++ +G +IGK G
Sbjct: 177 ------------------TACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEG 218
Query: 160 QIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HD 214
+ ++ I +T +I I L+D L + + + G KA +I ++ ++
Sbjct: 219 RNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGSIETCAKAEEEIMKKIRESYE 274
Query: 215 NPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
N + +L A I + ++ L P+++ + G S +++
Sbjct: 275 NDIAAMNLQAHLIPGLNLNALGLFPPSSSGIPPPAVSVASAAAAASYPPFGPESETVH-- 332
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
L P +G +IGK G I Q+ + +GA+IK+ + EG D + +
Sbjct: 333 -------------LFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMV 377
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGG 389
++ EA + Q R K++ ++ + + VP+ G +IGKGG
Sbjct: 378 -------IITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGG 430
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
+ E++ LT A + ++P++ P E+D+ +V+I+G
Sbjct: 431 KTVNELQNLTSAEV-VVPRDQTP---DENDQVVVKITGHF 466
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 35/180 (19%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSAS 96
GPE P +G+IIG+ G+ +KQL + I+I P ++ R+V +
Sbjct: 324 FGPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPP 383
Query: 97 DETNAFEDGDKFVSPAQDALFKVHDRVIA----EELRGDEDSDGGHQVTAKLLVPSDQIG 152
+ A FK R+ E G ++ ++ A + VPS G
Sbjct: 384 E-----------------AQFKAQGRIYGKLKEENFFGPKEEV---KLEAHIKVPSYAAG 423
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKALCQIASR 211
VIGKGG+ V +++ T A++ + +D+ +D+ +V+I+G CQ+A R
Sbjct: 424 RVIGKGGKTVNELQNLTSAEVVVPRDQ----TPDENDQVVVKITGHFYA-----CQLAQR 474
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
G S + P+ D+ LR++ P +G +IGK GA I I +++ + I +
Sbjct: 104 GSPSATARQKPQSDVP-----LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKEN 158
Query: 325 EG-DDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGC 383
G + IT+ S T I +++ + + ++ E ++L + +G
Sbjct: 159 AGAAEKPITIHSTPEGCSTACKIIMEIMQKEAQDTKFTE------EIPLKILAHNNFVGR 212
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
LIGK G + ++ + T I I P ++L + + + G ++ A ++M ++R
Sbjct: 213 LIGKEGRNLKKIEQDTDTKITISPLQDL--TLYNPERTITVKGSIETCAKAEEEIMKKIR 270
>gi|147903491|ref|NP_001091320.1| poly(rC) binding protein 1 [Xenopus laevis]
gi|124481736|gb|AAI33216.1| LOC100037147 protein [Xenopus laevis]
Length = 221
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TG+Q+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGSQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + +++SNS ++S V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-------IINSMSNSTATSKPPV------------- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+G+ ++V
Sbjct: 126 STGSQVQV 133
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 34/188 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSTATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--E 450
E+R T + +++ + LP + + V ISG DA+IQ + ++ + + +
Sbjct: 121 KEIRESTGSQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 172
Query: 451 GAVSTFVP 458
GA + P
Sbjct: 173 GATIPYRP 180
>gi|242021846|ref|XP_002431354.1| polyrC binding protein, putative [Pediculus humanus corporis]
gi|212516622|gb|EEB18616.1| polyrC binding protein, putative [Pediculus humanus corporis]
Length = 234
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 30/174 (17%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSP 111
+++GSIIG+ GEIVK+ R ++ +KI I + ER+VTV ++
Sbjct: 24 KEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPTN-------------- 67
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKGGQIVQN 164
A+FK + + E GG +T +L+VP+ Q G +IGKGG ++
Sbjct: 68 ---AIFKAFSLICKKFEEFQELQSGGGSMGIPKPPITLRLIVPASQCGSLIGKGGSKIKE 124
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
IR TGA I++ E LP+ R+ V ISG + + + + I + ++P +
Sbjct: 125 IREVTGASIQV-ASEMLPNSTERA---VTISGTSEAITQCIYHICCVMLESPPK 174
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 77/150 (51%), Gaps = 19/150 (12%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G I+ + R+ESGA I + S + ++TV+
Sbjct: 15 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSC--PERIVTVTGP------T 66
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISF-------TTRLLVPTSRIGCLIGKGGSIITEMR 396
+A +A + + E E SG S T RL+VP S+ G LIGKGGS I E+R
Sbjct: 67 NAIFKAFSLICKKFEEFQELQSGGGSMGIPKPPITLRLIVPASQCGSLIGKGGSKIKEIR 126
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISG 426
+T A+I++ E LP + + V ISG
Sbjct: 127 EVTGASIQVA-SEMLP---NSTERAVTISG 152
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 59/189 (31%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+ D +T +L++ ++G +IGK G+IV+ R E+GA+I I D P + +V
Sbjct: 8 NDDPNITLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDGSCP------ERIV 60
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I + +
Sbjct: 61 TVTGPTNAIFKAFSLICKKFEE-------------------------------------- 82
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
++ +G S + P +LRL+ P + G +IGKGG+ I +IR+
Sbjct: 83 ------FQELQSGGGSMGIPKPP--------ITLRLIVPASQCGSLIGKGGSKIKEIREV 128
Query: 313 SGAAIKVDS 321
+GA+I+V S
Sbjct: 129 TGASIQVAS 137
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + GS+IG+GG +K++R T + I++ E +P S ER VT+ S+
Sbjct: 103 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSE 155
>gi|363737066|ref|XP_003641794.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Gallus gallus]
Length = 564
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 172/391 (43%), Gaps = 58/391 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K L T+SK+ I + G+ E+ +T+++ + +
Sbjct: 180 DFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGCS 239
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I + ++ + D + ++ K+L + +G +IGK G
Sbjct: 240 -------------EAC-----RMILDIMQKEADETKSAEEIPLKILAHNSLVGRLIGKEG 281
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I +TG +I I + L + + + G A +I +L ++N
Sbjct: 282 RNLKKIEQDTGTKITISPLQDL--TIYNPERTITVKGSTEACSNAEVEIMKKLREAYEND 339
Query: 217 SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
+ + A+ I + S+ + G++ M P A ++ P
Sbjct: 340 IVAVNQQANLIPGLNLSALGIFS-------TGLS--MLPSSAGARGAAAAAPYHPFALPE 390
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
++ + L P +G +IGK G I Q+ + +GA+IK+ + EG D +
Sbjct: 391 QEV------VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI--APAEGPDATERMV-- 440
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSI 391
++ EA + Q R K++ ++ + + VP+ G +IGKGG
Sbjct: 441 -----IITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIKVPSFAAGRVIGKGGKT 495
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+ E++ LT A + I+P++ P E++E++
Sbjct: 496 VNELQNLTSAEV-IVPRDQTP---DENEEVI 522
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE V P + +G+IIG+ G+ +KQL + I+I P + ER+V + + E
Sbjct: 389 PEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDATERMVII-TGPPE 447
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 448 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIKVPSFAAGRVIGKG 492
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 493 GKTVNELQNLTSAEVIVPRDQ 513
>gi|410910370|ref|XP_003968663.1| PREDICTED: RNA-binding protein Nova-1-like [Takifugu rubripes]
Length = 496
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 25 KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET--- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 47 KRTNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 98
Query: 82 VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV- 140
PG+ ERV + + N + F++ + + + + + + +V
Sbjct: 99 YPGTTERVCLIQGTVEALNGVHN---FIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVK 155
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V ISGE
Sbjct: 156 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTISGEPEQ 212
Query: 201 VKKALCQIASRLHDNPSRSQHL 222
+KA+ I ++ ++P S L
Sbjct: 213 NRKAVEIIVQKIQEDPQSSSCL 234
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 41/186 (22%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E+ L+++ P G +IGKGG I Q+++E+GA IK+ SK+F+ T
Sbjct: 56 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS-------------KSKDFYPGT 102
Query: 343 ------LSATIEAV----------VRLQPRCSEKIERDSGLISFTT---------RLLVP 377
+ T+EA+ VR P+ ++K E S L TT +L+VP
Sbjct: 103 TERVCLIQGTVEALNGVHNFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVKQAKLIVP 162
Query: 378 TSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQ 437
S G +IGKGG+ + + + A +++ K P+ + + +V ISG+ + + A+
Sbjct: 163 NSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTISGEPEQNRKAVEI 219
Query: 438 VMTRLR 443
++ +++
Sbjct: 220 IVQKIQ 225
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + ++A L E G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 383 ATNGYLSAASPLVASSLLATEKLAEGAKEVVEIAVPENLVGAILGKGGKTLVEYQELTGA 442
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I+ R+
Sbjct: 443 RIQISKKGEFIPGTRNRK---VTITGSQAATQAAQYLISQRI 481
>gi|7141072|gb|AAF37203.1|AF198254_1 mRNA-binding protein CRDBP [Homo sapiens]
Length = 577
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKTLAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH + G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLTPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|307199010|gb|EFN79734.1| Poly(rC)-binding protein 3 [Harpegnathos saltator]
Length = 469
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 12/168 (7%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIVK+ R ++ +KI I + GS ER+VTV ++ + F+
Sbjct: 24 KEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTGPTN--SIFKAFTLICK 78
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
++ + HD I G +T +L+VP+ Q G +IGKGG ++ IR TG
Sbjct: 79 KFEEWCSQFHD--IQGGGAGGGGGVSRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTG 136
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
A I++ E LP+ R+ V ISG + + + + I + ++P +
Sbjct: 137 ASIQV-ASEMLPNSTERA---VTISGTSEAITQCIYHICCVMLESPPK 180
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 17/159 (10%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+D S ++RL+ +G +IGK G I+ + R+ESGA I + S +T +
Sbjct: 8 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTN 67
Query: 337 EFFEDTLSATIEAVVRLQPRCSE------KIERDSGLIS---FTTRLLVPTSRIGCLIGK 387
F+ A + + CS+ G +S T RL+VP S+ G LIGK
Sbjct: 68 SIFK----AFTLICKKFEEWCSQFHDIQGGGAGGGGGVSRPPITLRLIVPASQCGSLIGK 123
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
GGS I E+R +T A+I++ E LP + + V ISG
Sbjct: 124 GGSKIKEIREVTGASIQVA-SEMLP---NSTERAVTISG 158
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + VP IGC+IGKGG+ I E+R+++ A IRI E + D + I+G+ D
Sbjct: 275 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDA 332
Query: 431 AKDALIQVMTRLRANL 446
AL Q + + L
Sbjct: 333 V--ALAQYLINMSVEL 346
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T ++ VP++ IGC+IGKGG + IR +GA IRI E A +D + I+G
Sbjct: 275 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA--TDRTITITGNPDA 332
Query: 201 VKKALCQ 207
V AL Q
Sbjct: 333 V--ALAQ 337
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + GS+IG+GG +K++R T + I++ E +P S ER VT+ S+
Sbjct: 109 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSE 161
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV+ R E+GA+I I SC R +V ++G +
Sbjct: 15 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG----SCPER---IVTVTGPTN 67
Query: 200 VVKKALCQIASRLHD 214
+ KA I + +
Sbjct: 68 SIFKAFTLICKKFEE 82
>gi|222623934|gb|EEE58066.1| hypothetical protein OsJ_08922 [Oryza sativa Japonica Group]
Length = 313
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 11/170 (6%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS---TEGDDCLIT 332
RDD K LR + G +IGKGG+ IN+ + +SGA I++ S +D +I
Sbjct: 4 RDD-KEKPTHLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIM 62
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
VS F++ + A +E + L+ +E E + RL+VP S G +IGKGGS I
Sbjct: 63 VSG--LFDEVIKA-MELI--LEKLLAEGEESNEAEARPKVRLVVPNSSCGGIIGKGGSTI 117
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
+ A I+I P++N D +V ++G LD A+ ++++L
Sbjct: 118 KSFIEDSHAGIKISPQDN--NFVGLHDRLVTVTGPLDHQMRAIYLILSKL 165
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 141/328 (42%), Gaps = 32/328 (9%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSASDET 99
T R+L G IIG+GG + + + + ++I++ E PG+ +R++ V DE
Sbjct: 11 THLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEV 70
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
A+ + ++++AE G+E ++ + +L+VP+ G +IGKGG
Sbjct: 71 -------------IKAMELILEKLLAE---GEESNEAEARPKVRLVVPNSSCGGIIGKGG 114
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL----HDN 215
+++ ++ A I+I ++ + D LV ++G +A+ I S+L H
Sbjct: 115 STIKSFIEDSHAGIKISPQDN--NFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYP 172
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
P+ S + + S G VG A GP GY G + + +P
Sbjct: 173 PNLSSPFPYAGLGFP-SYPGVPVGYMIPQVPYNNAVNYGP-NGYGGRYQNNKPSTPMRSP 230
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
++ + SL + +IG V+G+ G I +I Q SGA IK+ S GD T
Sbjct: 231 ANN--DAQDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKI---SDRGDFIAGTSER 285
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIER 363
K T A A + R + ER
Sbjct: 286 KVTITGTSEAIQAAESMIMQRVTASSER 313
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 92/231 (39%), Gaps = 71/231 (30%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVV 201
+ LV + GC+IGKGG + +S++GA+I++ + E P +D ++ +SG V
Sbjct: 14 RFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGT---NDRIIMVSGLFDEV 70
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
KA+ I + LLA
Sbjct: 71 IKAMELILEK----------LLAE------------------------------------ 84
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-- 319
G+ S + P+ +RLV P ++ GG+IGKGG+ I ++S A IK+
Sbjct: 85 ---GEESNEAEARPK---------VRLVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKISP 132
Query: 320 -DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS 369
D++ D L+TV+ L + A+ + + SE + L S
Sbjct: 133 QDNNFVGLHDRLVTVTGP------LDHQMRAIYLILSKLSEDVHYPPNLSS 177
>gi|57530702|ref|NP_001006359.1| insulin-like growth factor 2 mRNA-binding protein 3 [Gallus gallus]
gi|82082638|sp|Q5ZLP8.1|IF2B3_CHICK RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3; AltName:
Full=IGF-II mRNA-binding protein 3; AltName: Full=VICKZ
family member 3
gi|53128909|emb|CAG31345.1| hypothetical protein RCJMB04_5e15 [Gallus gallus]
Length = 584
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 176/400 (44%), Gaps = 61/400 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI I + G+ E+ +T++S + +
Sbjct: 196 DVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCS 255
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
++I E ++ + +D+ ++ K+L ++ +G +IGK G
Sbjct: 256 ------------------TACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEG 297
Query: 160 QIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HD 214
+ ++ I +T +I I L+D L + + + G KA +I ++ ++
Sbjct: 298 RNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGSIETCAKAEEEIMKKIRESYE 353
Query: 215 NPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
N + +L A I + ++ L P+++ + G S
Sbjct: 354 NDIAAMNLQAHLIPGLNLNALGLFPPSSSGIPPPAVSVASAAAAASYPPFGQQPESE--- 410
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
++ L P +G +IGK G I Q+ + +GA+IK+ + EG D + +
Sbjct: 411 ----------TVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMV 458
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGG 389
++ EA + Q R K++ ++ + + VP+ G +IGKGG
Sbjct: 459 -------IITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGG 511
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
+ E++ LT A + ++P++ P E+D+ +V+I+G
Sbjct: 512 KTVNELQNLTSAEV-VVPRDQTP---DENDQVVVKITGHF 547
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 35/178 (19%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P +G+IIG+ G+ +KQL + I+I P ++ R+V + +
Sbjct: 407 PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPE- 465
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIA----EELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
A FK R+ E G ++ ++ A + VPS G V
Sbjct: 466 ----------------AQFKAQGRIYGKLKEENFFGPKEEV---KLEAHIKVPSYAAGRV 506
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKALCQIASR 211
IGKGG+ V +++ T A++ + +D+ +D+ +V+I+G CQ+A R
Sbjct: 507 IGKGGKTVNELQNLTSAEVVVPRDQ----TPDENDQVVVKITGHFYA-----CQLAQR 555
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
G S + P+ D+ LR++ P +G +IGK GA I I +++ + I +
Sbjct: 183 GSPSATTRQKPQSDVP-----LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKEN 237
Query: 325 EG-DDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGC 383
G + IT+ S T I +++ + + ++ E ++L + +G
Sbjct: 238 AGAAEKPITIHSTPEGCSTACKIIMEIMQKEAQDTKFTE------EIPLKILAHNNFVGR 291
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
LIGK G + ++ + T I I P ++L E + + G ++ A ++M ++R
Sbjct: 292 LIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPE--RTITVKGSIETCAKAEEEIMKKIR 349
>gi|322796009|gb|EFZ18633.1| hypothetical protein SINV_09712 [Solenopsis invicta]
Length = 440
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 12/168 (7%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIVK+ R ++ +KI I + GS ER+VTV ++ + F+
Sbjct: 27 KEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTGPTN--SIFKAFTLICK 81
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
++ + HD I G +T +L+VP+ Q G +IGKGG ++ IR TG
Sbjct: 82 KFEEWCSQFHD--IQGGGAGGGGGVSRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTG 139
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
A I++ E LP+ R+ V ISG + + + + I + ++P +
Sbjct: 140 ASIQV-ASEMLPNSTERA---VTISGTSEAITQCIYHICCVMLESPPK 183
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 25/163 (15%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+D S ++RL+ +G +IGK G I+ + R+ESGA I + S +T +
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTN 70
Query: 337 EFFEDTLSATIEAVVRLQPRCSE-------------KIERDSGLISFTTRLLVPTSRIGC 383
F+ A + + CS+ + R T RL+VP S+ G
Sbjct: 71 SIFK----AFTLICKKFEEWCSQFHDIQGGGAGGGGGVSRPP----ITLRLIVPASQCGS 122
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
LIGKGGS I E+R +T A+I++ E LP + + V ISG
Sbjct: 123 LIGKGGSKIKEIREVTGASIQVA-SEMLP---NSTERAVTISG 161
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + VP IGC+IGKGG+ I E+R+++ A IRI E + D + I+G+ D
Sbjct: 372 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDA 429
Query: 431 AKDALIQVMTRLR 443
AL Q + +R
Sbjct: 430 V--ALAQYLINMR 440
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T ++ VP++ IGC+IGKGG + IR +GA IRI E A +D + I+G
Sbjct: 372 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA--TDRTITITGNPDA 429
Query: 201 VKKA 204
V A
Sbjct: 430 VALA 433
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + GS+IG+GG +K++R T + I++ E +P S ER VT+ S+
Sbjct: 112 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSE 164
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV+ R E+GA+I I SC R +V ++G +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG----SCPER---IVTVTGPTN 70
Query: 200 VVKKALCQIASRLHD 214
+ KA I + +
Sbjct: 71 SIFKAFTLICKKFEE 85
>gi|302564995|ref|NP_001180850.1| insulin-like growth factor 2 mRNA-binding protein 1 [Macaca
mulatta]
Length = 577
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|449492580|ref|XP_002192437.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Taeniopygia guttata]
Length = 584
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 176/400 (44%), Gaps = 61/400 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI I + G+ E+ +T++S + +
Sbjct: 196 DVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCS 255
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
++I E ++ + +D+ ++ K+L ++ +G +IGK G
Sbjct: 256 ------------------TACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEG 297
Query: 160 QIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HD 214
+ ++ I +T +I I L+D L + + + G KA +I ++ ++
Sbjct: 298 RNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGSIETCAKAEEEIMKKIRESYE 353
Query: 215 NPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
N + +L A I + ++ L P+++ + G S
Sbjct: 354 NDIAAMNLQAHLIPGLNLNALGLFPPSSSGIPPPAVSVASAAAAASYPPFGQQPESE--- 410
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
++ L P +G +IGK G I Q+ + +GA+IK+ + EG D + +
Sbjct: 411 ----------TVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMV 458
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGG 389
++ EA + Q R K++ ++ + + VP+ G +IGKGG
Sbjct: 459 -------IITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGG 511
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
+ E++ LT A + ++P++ P E+D+ +V+I+G
Sbjct: 512 KTVNELQNLTSAEV-VVPRDQTP---DENDQVVVKITGHF 547
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 35/178 (19%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P +G+IIG+ G+ +KQL + I+I P ++ R+V + +
Sbjct: 407 PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPE- 465
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIA----EELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
A FK R+ E G ++ ++ A + VPS G V
Sbjct: 466 ----------------AQFKAQGRIYGKLKEENFFGPKEEV---KLEAHIKVPSYAAGRV 506
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKALCQIASR 211
IGKGG+ V +++ T A++ + +D+ +D+ +V+I+G CQ+A R
Sbjct: 507 IGKGGKTVNELQNLTSAEVVVPRDQ----TPDENDQVVVKITGHFYA-----CQLAQR 555
>gi|335297826|ref|XP_003358128.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 1 [Sus scrofa]
Length = 577
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVREA--- 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|225429818|ref|XP_002280789.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
Length = 420
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 23/188 (12%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLS 344
+ RL+ P + +G +IG+ G II +I + +GA I V S DC++ +S+KE LS
Sbjct: 28 AFRLIVPGSAVGSIIGREGKIIKRISEGTGARIHVISLPAGTTDCIVLISAKEQPHLRLS 87
Query: 345 ATIEAVVRLQPR------------CSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+EAV+ + R CS+ E ++F LV S+ +IGK GS +
Sbjct: 88 PAMEAVIEVFKRVTGLYPIDGNGMCSKASEVKLSSVTF----LVGYSQALSIIGKEGSRV 143
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
+ + + IL + +P S D+ +++I G + A+ V+ LR L D
Sbjct: 144 RAIEESSGTTVGILSR--VPFYVSPDERIIKIQGQVLKVMAAMEAVLYHLRLYLVD---- 197
Query: 453 VSTFVPVF 460
S+ +P F
Sbjct: 198 -SSVIPAF 204
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 137/322 (42%), Gaps = 42/322 (13%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P +R + P +GSIIGR G+I+K++ T ++I + G+ + +V +
Sbjct: 24 PGQNAFRLIVPGSAVGSIIGREGKIIKRISEGTGARIHVISLPAGTTDCIVLI------- 76
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIA-EELRGDEDSDGGHQV---TAKLLVPSDQIGCVI 155
+A E +SPA +A+ +V RV + G+ +V + LV Q +I
Sbjct: 77 SAKEQPHLRLSPAMEAVIEVFKRVTGLYPIDGNGMCSKASEVKLSSVTFLVGYSQALSII 136
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH-- 213
GK G V+ I +G + IL +P + +++I G+ V A+ + L
Sbjct: 137 GKEGSRVRAIEESSGTTVGILS--RVPFYVSPDERIIKIQGQVLKVMAAMEAVLYHLRLY 194
Query: 214 --DN---PSRSQHLLA------SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD 262
D+ P+ S+ ++S HS+ G + + PL+G +
Sbjct: 195 LVDSSVIPAFSEKCKTGISQADQSLSLHHSTPAHQPGADSMYSL----PLLGHEAKVEAK 250
Query: 263 TAGDWSRSLYSAP---------RDDLSS--KEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+S SLY+ R D ++ + + R+ P + +IG G I+ IR+
Sbjct: 251 IPSSYS-SLYAQEPVLGGLPLRRSDRAAAPAQRTERIKIPFSAAKDIIGIAGETIDHIRR 309
Query: 312 ESGAAIKVDSSSTEGDDCLITV 333
SG+ I ++ + D+ ++ V
Sbjct: 310 TSGSIITIEEDRSLPDEYILEV 331
>gi|449270977|gb|EMC81613.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Columba livia]
Length = 584
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 176/400 (44%), Gaps = 61/400 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI I + G+ E+ +T++S + +
Sbjct: 196 DVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCS 255
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
++I E ++ + +D+ ++ K+L ++ +G +IGK G
Sbjct: 256 ------------------TACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEG 297
Query: 160 QIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HD 214
+ ++ I +T +I I L+D L + + + G KA +I ++ ++
Sbjct: 298 RNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGSIETCAKAEEEIMKKIRESYE 353
Query: 215 NPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
N + +L A I + ++ L P+++ + G S
Sbjct: 354 NDIAAMNLQAHLIPGLNLNALGLFPPSSSGIPPPAVSVASAAAAASYPPFGQQPESE--- 410
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
++ L P +G +IGK G I Q+ + +GA+IK+ + EG D + +
Sbjct: 411 ----------TVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMV 458
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGG 389
++ EA + Q R K++ ++ + + VP+ G +IGKGG
Sbjct: 459 -------IITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGG 511
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
+ E++ LT A + ++P++ P E+D+ +V+I+G
Sbjct: 512 KTVNELQNLTSAEV-VVPRDQTP---DENDQVVVKITGHF 547
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 35/178 (19%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P +G+IIG+ G+ +KQL + I+I P ++ R+V + +
Sbjct: 407 PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPE- 465
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIA----EELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
A FK R+ E G ++ ++ A + VPS G V
Sbjct: 466 ----------------AQFKAQGRIYGKLKEENFFGPKEEV---KLEAHIKVPSYAAGRV 506
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKALCQIASR 211
IGKGG+ V +++ T A++ + +D+ +D+ +V+I+G CQ+A R
Sbjct: 507 IGKGGKTVNELQNLTSAEVVVPRDQ----TPDENDQVVVKITGHFYA-----CQLAQR 555
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 81/189 (42%), Gaps = 14/189 (7%)
Query: 256 YGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGA 315
+G G S + P+ D+ LR++ P +G +IGK GA I I +++ +
Sbjct: 174 FGQRGAPRQGSPSATTRQKPQSDVP-----LRMLVPTQFVGAIIGKEGATIRNITKQTQS 228
Query: 316 AIKVDSSSTEG-DDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRL 374
I + G + IT+ S T I +++ + + ++ E ++
Sbjct: 229 KIDIHRKENAGAAEKPITIHSTPEGCSTACKIIMEIMQKEAQDTKFTE------EIPLKI 282
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
L + +G LIGK G + ++ + T I I P ++L E + + G ++ A
Sbjct: 283 LAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPE--RTITVKGSIETCAKA 340
Query: 435 LIQVMTRLR 443
++M ++R
Sbjct: 341 EEEIMKKIR 349
>gi|395826635|ref|XP_003786522.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Otolemur garnettii]
Length = 577
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|167535308|ref|XP_001749328.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772194|gb|EDQ85849.1| predicted protein [Monosiga brevicollis MX1]
Length = 689
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 160/382 (41%), Gaps = 83/382 (21%)
Query: 49 CPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET------------VPGSEERVVTVYSAS 96
P +G IIGRGGE + +L+ + S+I++ + VP S +R +
Sbjct: 102 VPGAHVGRIIGRGGETINRLQNQSGSRIQVAQDLGQPMRPCTLTGVPDSVQRAKVLIEEI 161
Query: 97 DETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGG----HQVTAKLLVPSDQIG 152
+ G P +A ++A D DG + T ++VP+++ G
Sbjct: 162 VREHMQPFGPGAGGPGGNASGPTTASLMASAYGTAPDGDGADPNANAETETMMVPAERAG 221
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+IG+GG+ + I++ +GA++++++++ P A R L+ + G+A +K+A +A L
Sbjct: 222 FLIGRGGETINMIQTRSGARLKMVQED--PHAAER---LLYMMGDAEAIKRARELVADLL 276
Query: 213 HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLY 272
+ PS Q A + S+
Sbjct: 277 AEKPSAPQE--APPMPTSY----------------------------------------- 293
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG---DDC 329
D +++ L++ P G VIG+GG I +I ++G I+ D + G +D
Sbjct: 294 -----DENNRHLRLKIEVPGVAAGRVIGRGGETIRRIEADTGCRIQFDQADGVGLGPNDA 348
Query: 330 LITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISF------TTRLLVPTSRIGC 383
I + +D + A +A+V + R +E+ D+G S T + +P R G
Sbjct: 349 RIATLTGN--QDAIEAAEQAIVGII-RDAERP--DAGPPSRRADSRPTDTIAIPAERAGF 403
Query: 384 LIGKGGSIITEMRRLTKANIRI 405
+IGKGG I ++ T ++ +
Sbjct: 404 IIGKGGETIRSIQDQTGVHLEL 425
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 118/297 (39%), Gaps = 47/297 (15%)
Query: 119 VHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD 178
+H V E L +D D VT ++ VP +G +IG+GG+ + +++++G++I++ +D
Sbjct: 76 IHHVVWNEPLE-LKDVDASSIVTVEMTVPGAHVGRIIGRGGETINRLQNQSGSRIQVAQD 134
Query: 179 EHLP--SCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
P C L +G V++A I + +H+ +
Sbjct: 135 LGQPMRPCTL--------TGVPDSVQRAKVLIEEIVR------EHMQPFGPGAGGPGGNA 180
Query: 237 LVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIG 296
TA+ LM G D GD + D ++ + ++ P G
Sbjct: 181 SGPTTAS--------LMASAYGTAPD--GDGA---------DPNANAETETMMVPAERAG 221
Query: 297 GVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV--------SSKEFFEDTLSATIE 348
+IG+GG IN I+ SGA +K+ + L+ + ++E D L+
Sbjct: 222 FLIGRGGETINMIQTRSGARLKMVQEDPHAAERLLYMMGDAEAIKRARELVADLLAEKPS 281
Query: 349 AVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
A P + E + L ++ VP G +IG+GG I + T I+
Sbjct: 282 APQEAPPMPTSYDENNRHL---RLKIEVPGVAAGRVIGRGGETIRRIEADTGCRIQF 335
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 48 LCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDK 107
+ P + G +IGRGGE + ++ + +++++ + P + ER++ + + A + +
Sbjct: 214 MVPAERAGFLIGRGGETINMIQTRSGARLKMVQEDPHAAERLLYMMG---DAEAIKRARE 270
Query: 108 FVSPAQDALF-KVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIR 166
V+ D L K A + D + H + K+ VP G VIG+GG+ ++ I
Sbjct: 271 LVA---DLLAEKPSAPQEAPPMPTSYDENNRH-LRLKIEVPGVAAGRVIGRGGETIRRIE 326
Query: 167 SETGAQIRI 175
++TG +I+
Sbjct: 327 ADTGCRIQF 335
>gi|452989355|gb|EME89110.1| hypothetical protein MYCFIDRAFT_71441 [Pseudocercospora fijiensis
CIRAD86]
Length = 360
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 133/294 (45%), Gaps = 45/294 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + ++ G IIG+ G+ V LR T + + + VPG +RV+TV A D
Sbjct: 44 RAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSKVVPGVHDRVLTVTGA---LTGISDA 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
V+ D+L K ++ + G+ ++ H + +LL+ +Q+G +IG+ G ++ I
Sbjct: 101 YGLVA---DSLVKGVPQMGMGGVVGNPNT---HPI--RLLISHNQMGTIIGRQGLKIKQI 152
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
+ +G ++ + + E LP R +V++ G V+KA+ +I L D+ R +
Sbjct: 153 QDASGVRM-VAQKEMLPQSTER---IVEVQGTPEGVQKAVWEIGKCLIDDEQRGYGTVL- 207
Query: 226 AISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYK-----GDTAGDWSRSLYSAPRD--- 277
+S + + G A P+ G G Y D G S S Y R+
Sbjct: 208 -----YSPAVRVQGGAPAPPLNGTGASYGAPRSYNRTGNGADFTGGQSPSSYPPRRNGPS 262
Query: 278 ------------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D+ ++ S+ P +G +IG+GG+ I++IR+ SGA I +
Sbjct: 263 DGGPPPRPEDGEDIQTQNISI----PADMVGCIIGRGGSKISEIRKSSGARISI 312
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
DG T + +P+D +GC+IG+GG + IR +GA+I I K H + + + I
Sbjct: 272 DGEDIQTQNISIPADMVGCIIGRGGSKISEIRKSSGARISIAKAPHDET----GERMFTI 327
Query: 195 SGEASVVKKALCQIASRLH-DNPSRSQHLLASA 226
+G + +KAL + L + RSQ A+A
Sbjct: 328 TGGPAANEKALYLLYENLEAEKMRRSQIPEATA 360
>gi|403279506|ref|XP_003931289.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Saimiri boliviensis boliviensis]
Length = 577
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|359482434|ref|XP_002270860.2| PREDICTED: tyrosine-sulfated glycopeptide receptor 1-like [Vitis
vinifera]
Length = 1280
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 178 DEHLPSCALRSDELVQISGEASVVK--KALCQIASRLHDNPSRSQHLLASAISNSHSSSG 235
+EH+ + +DE + V K L QIASRLHDNPSRSQHL + +SSSG
Sbjct: 117 EEHVITIYNSNDETNAFDDSDTFVSPAKILYQIASRLHDNPSRSQHLFVYVVPIGYSSSG 176
Query: 236 SLVGPTAATPIVGIAPLMG 254
SL+G T+ PI+G+APL+
Sbjct: 177 SLMGLTSGAPIMGLAPLIN 195
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 8/80 (10%)
Query: 51 IRKIGSII-GRGGEIVKQLRIDTKSKIR------IGETVPGSEERVVTVYSASDETNAFE 103
+R+I SII G +I K +ID +I I PG EE V+T+Y+++DETNAF+
Sbjct: 75 LRRIDSIIDGFKADISKAPKIDPTKEIASFTARVIIMDYPGWEEHVITIYNSNDETNAFD 134
Query: 104 DGDKFVSPAQDALFKVHDRV 123
D D FVSPA+ L+++ R+
Sbjct: 135 DSDTFVSPAK-ILYQIASRL 153
>gi|326925691|ref|XP_003209044.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Meleagris gallopavo]
Length = 502
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 172/391 (43%), Gaps = 58/391 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K L T+SK+ I + G+ E+ +T+++ + +
Sbjct: 118 DFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGCS 177
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I + ++ + D + ++ K+L + +G +IGK G
Sbjct: 178 -------------EAC-----RMILDIMQKEADETKSAEEIPLKILAHNSLVGRLIGKEG 219
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I +TG +I I + L + + + G A +I +L ++N
Sbjct: 220 RNLKKIEQDTGTKITISPLQDL--TIYNPERTITVKGSTEACSNAEVEIMKKLREAYEND 277
Query: 217 SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
+ + A+ I + S+ + G++ M P A ++ P
Sbjct: 278 IVAVNQQANLIPGLNLSALGIFS-------TGLS--MLPSSVGARGAAAAAPYHPFALPE 328
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
++ + L P +G +IGK G I Q+ + +GA+IK+ + EG D +
Sbjct: 329 QEV------VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI--APAEGPDATERMV-- 378
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSI 391
++ EA + Q R K++ ++ + + VP+ G +IGKGG
Sbjct: 379 -----IITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIKVPSFAAGRVIGKGGKT 433
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+ E++ LT A + I+P++ P E++E++
Sbjct: 434 VNELQNLTSAEV-IVPRDQTP---DENEEVI 460
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE V P + +G+IIG+ G+ +KQL + I+I P + ER+V + + E
Sbjct: 327 PEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDATERMV-IITGPPE 385
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 386 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIKVPSFAAGRVIGKG 430
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 431 GKTVNELQNLTSAEVIVPRDQ 451
>gi|195440454|ref|XP_002068057.1| GK10610 [Drosophila willistoni]
gi|194164142|gb|EDW79043.1| GK10610 [Drosophila willistoni]
Length = 363
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 132/295 (44%), Gaps = 48/295 (16%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIV + R ++ +KI I + GS ER+VTV S T+A ++
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISD---GSCPERIVTV---SGTTSAIFSAFTLIT 86
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+ + D G Q+ +L+VP+ Q G +IGK G ++ IR TG
Sbjct: 87 KKFEEWCSQFN---------DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL-------- 222
I++ E LP+ R+ V +SG A + + + QI + ++P R +
Sbjct: 138 CSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQV 193
Query: 223 ---LASAISNSHSSSGSLVGPT---AATP----IVGIAPLMGP--YGG--YKGDTAGDWS 268
+ A + + G+ PT A P M P GG + A
Sbjct: 194 TGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAALAALAG 253
Query: 269 RSLYSAPRDDLSSKEFSLRLVCPVAN--IGGVIGKGGAIINQIRQESGAAIKVDS 321
L +A + ++ + V+N IG +IGKGG I +IRQ SGA I++ +
Sbjct: 254 SQLRTANANRAQQQQHEMT----VSNDLIGCIIGKGGTKIAEIRQISGAMIRISN 304
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 88/179 (49%), Gaps = 18/179 (10%)
Query: 266 DWSRSLYSAP-RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
+ S S AP + + S ++RL+ +G +IGK G I+N+ R+ESGA I + S
Sbjct: 5 NTSSSAGGAPIKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSC 64
Query: 325 EGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIER--DSGLISFT---TRLLVPTS 379
+ ++TVS T SA A + + E + D G + T RL+VP S
Sbjct: 65 --PERIVTVSG------TTSAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPAS 116
Query: 380 RIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
+ G LIGK GS I E+R+ T +I++ E LP + + V +SG + + Q+
Sbjct: 117 QCGSLIGKSGSKIKEIRQTTGCSIQVA-SEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ V IGC+IGKGG+ I E+R+++ A IRI E + D + ISG+ D
Sbjct: 271 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSV-- 326
Query: 434 ALIQVMTRLRANL 446
AL Q + +R ++
Sbjct: 327 ALAQYLINMRISM 339
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV R E+GA+I I D P + +V +SG S
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTS 76
Query: 200 VVKKALCQIASRLHD 214
+ A I + +
Sbjct: 77 AIFSAFTLITKKFEE 91
>gi|348562599|ref|XP_003467097.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Cavia porcellus]
Length = 599
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 175/395 (44%), Gaps = 68/395 (17%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 218 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 277
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+ R+I E + + +D+ +V K+L ++ +G +IGK G
Sbjct: 278 SA------------------CRMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEG 319
Query: 160 QIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HD 214
+ ++ + +T +I I L+D L + + + G +A +I ++ ++
Sbjct: 320 RNLKKVEQDTDTKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVREAYE 375
Query: 215 NPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG--PYGGYKGDTAGDWSRSLY 272
N + L + I + ++ L +++ + + G PY S +
Sbjct: 376 NDVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPY-------------SSF 422
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
AP ++ +++ P +G +IGK G I Q+ + + A+IK+ T +
Sbjct: 423 MAPEQEM------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMV 476
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGK 387
+ ++ EA + Q R K++ ++ + T + VP S G +IGK
Sbjct: 477 I---------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGK 527
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
GG + E++ LT A + ++P++ P E+D+++
Sbjct: 528 GGKTVNELQNLTAAEV-VVPRDQTP---DENDQVI 558
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 31/151 (20%)
Query: 37 IIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV--- 92
+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 422 FMAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGP 481
Query: 93 ----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPS 148
+ A + F P ++ + H R VP+
Sbjct: 482 PEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VPA 518
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
G VIGKGG+ V +++ T A++ + +D+
Sbjct: 519 SAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 549
>gi|332019831|gb|EGI60292.1| Poly(rC)-binding protein 3 [Acromyrmex echinatior]
Length = 566
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 12/168 (7%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIVK+ R ++ +KI I + GS ER+VTV ++ + F+
Sbjct: 27 KEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTGPTN--SIFKAFTLICK 81
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
++ + HD + G +T +L+VP+ Q G +IGKGG ++ IR TG
Sbjct: 82 KFEEWCSQFHD--VPGSGAGGGGGVSRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTG 139
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
A I++ E LP+ R+ V ISG + + + + I + ++P +
Sbjct: 140 ASIQV-ASEMLPNSTERA---VTISGTSEAITQCIYHICCVMLESPPK 183
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 25/163 (15%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+D S ++RL+ +G +IGK G I+ + R+ESGA I + S +T +
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTN 70
Query: 337 EFFEDTLSATIEAVVRLQPRCSE-------------KIERDSGLISFTTRLLVPTSRIGC 383
F+ A + + CS+ + R T RL+VP S+ G
Sbjct: 71 SIFK----AFTLICKKFEEWCSQFHDVPGSGAGGGGGVSRPP----ITLRLIVPASQCGS 122
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
LIGKGGS I E+R +T A+I++ E LP + + V ISG
Sbjct: 123 LIGKGGSKIKEIREVTGASIQVA-SEMLP---NSTERAVTISG 161
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + VP IGC+IGKGG+ I E+R+++ A IRI E + D + I+G+ D
Sbjct: 372 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDA 429
Query: 431 AKDALIQVMTRLRANL 446
AL Q + + L
Sbjct: 430 V--ALAQYLINMSVEL 443
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T ++ VP++ IGC+IGKGG + IR +GA IRI E A +D + I+G
Sbjct: 372 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA--TDRTITITGNPDA 429
Query: 201 VKKALCQ 207
V AL Q
Sbjct: 430 V--ALAQ 434
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + GS+IG+GG +K++R T + I++ E +P S ER VT+ S+
Sbjct: 112 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSE 164
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV+ R E+GA+I I SC R +V ++G +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG----SCPER---IVTVTGPTN 70
Query: 200 VVKKALCQI-------ASRLHDNP 216
+ KA I S+ HD P
Sbjct: 71 SIFKAFTLICKKFEEWCSQFHDVP 94
>gi|149723930|ref|XP_001502310.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 1 [Equus caballus]
Length = 577
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|114666310|ref|XP_511944.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 2 [Pan troglodytes]
gi|397477448|ref|XP_003810082.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Pan paniscus]
Length = 577
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|380024759|ref|XP_003696159.1| PREDICTED: poly(rC)-binding protein 3-like [Apis florea]
Length = 560
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 92/171 (53%), Gaps = 23/171 (13%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIVK+ R ++ +KI I + GS ER+VTV ++ + F+
Sbjct: 27 KEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTGPTN--SIFKAFTLICK 81
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGG---HQVTAKLLVPSDQIGCVIGKGGQIVQNIRS 167
++ + HD ++G GG +T +L+VP+ Q G +IGKGG ++ IR
Sbjct: 82 KFEEWCSQFHD------IQGS----GGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIRE 131
Query: 168 ETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
TGA I++ D LP+ R+ V ISG + + + + I + ++P +
Sbjct: 132 VTGASIQVASDM-LPNSTERA---VTISGTSEAITQCIYHICCVMLESPPK 178
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+D S ++RL+ +G +IGK G I+ + R+ESGA I + S +T +
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTN 70
Query: 337 EFFEDTLSATIEAVVRLQPRCSE--KIERDSGLI--SFTTRLLVPTSRIGCLIGKGGSII 392
F+ A + + CS+ I+ G+ T RL+VP S+ G LIGKGGS I
Sbjct: 71 SIFK----AFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKI 126
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
E+R +T A+I++ + LP + + V ISG
Sbjct: 127 KEIREVTGASIQVA-SDMLP---NSTERAVTISG 156
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 67/213 (31%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV+ R E+GA+I I SC R +V ++G +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG----SCPER---IVTVTGPTN 70
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I + + S H GS GG
Sbjct: 71 SIFKAFTLICKKFEE-----------WCSQFHDIQGS--------------------GG- 98
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
PR + +LRL+ P + G +IGKGG+ I +IR+ +GA+I+V
Sbjct: 99 --------------VPRPPI-----TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQV 139
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR 352
S D L + + T+S T EA+ +
Sbjct: 140 AS------DMLPNSTERAV---TISGTSEAITQ 163
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + VP IGC+IGKGG+ I E+R+++ A IRI E + D + I+G+ D
Sbjct: 367 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDA 424
Query: 431 AKDA--LIQVMTRL-RANL 446
A LI + L +ANL
Sbjct: 425 VSLAQYLISMSVELQKANL 443
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T ++ VP++ IGC+IGKGG + IR +GA IRI E A +D + I+G
Sbjct: 367 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA--TDRTITITGNPDA 424
Query: 201 VKKA 204
V A
Sbjct: 425 VSLA 428
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + GS+IG+GG +K++R T + I++ + +P S ER VT+ S+
Sbjct: 107 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDMLPNSTERAVTISGTSE 159
>gi|300794399|ref|NP_001179383.1| insulin-like growth factor 2 mRNA-binding protein 1 [Bos taurus]
gi|296476533|tpg|DAA18648.1| TPA: insulin-like growth factor 2 mRNA binding protein 1-like [Bos
taurus]
Length = 577
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|440910511|gb|ELR60305.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Bos grunniens
mutus]
Length = 577
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|90652817|ref|NP_001035073.1| uncharacterized protein LOC664755 [Danio rerio]
gi|68533566|gb|AAH98540.1| Zgc:110045 [Danio rerio]
Length = 222
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 21/201 (10%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET-NAFED 104
R L +++GSIIG+ GE VK++R ++ ++I I + S ER+VT+ AS+ AF
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISDG--SSPERIVTITGASEVIFKAFAM 77
Query: 105 -GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
+KF +D L + + + VT +L+ P+ Q G +IGKGG ++
Sbjct: 78 IAEKF---EEDILASMINSTVTSR----------PPVTLRLVFPASQCGSLIGKGGSKIK 124
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLL 223
IR TGAQ+++ D LP R+ V ISG + + + I + + ++P + +
Sbjct: 125 EIRESTGAQVQVAGD-LLPDSTERA---VTISGTPHAITQCVKHICTVMLESPPKGATIP 180
Query: 224 ASAISNSHSSSGSLVGPTAAT 244
++ L P AAT
Sbjct: 181 YRPKPSAGGGHTVLTQPHAAT 201
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF---- 339
++RL+ +G +IGK G + ++R+ESGA I + S+ IT +S+ F
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISDGSSPERIVTITGASEVIFKAFA 76
Query: 340 -------EDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
ED L++ I + V +P T RL+ P S+ G LIGKGGS I
Sbjct: 77 MIAEKFEEDILASMINSTVTSRP-------------PVTLRLVFPASQCGSLIGKGGSKI 123
Query: 393 TEMRRLTKANIRI 405
E+R T A +++
Sbjct: 124 KEIRESTGAQVQV 136
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I D P + +
Sbjct: 9 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SDGSSP------ERI 61
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + V+ KA IA + ++ +LAS I+++ +
Sbjct: 62 VTITGASEVIFKAFAMIAEKFEED------ILASMINSTVT------------------- 96
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
S +LRLV P + G +IGKGG+ I +IR+
Sbjct: 97 ----------------------------SRPPVTLRLVFPASQCGSLIGKGGSKIKEIRE 128
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 129 STGAQVQV 136
>gi|344285913|ref|XP_003414704.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Loxodonta africana]
Length = 577
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|56237027|ref|NP_006537.3| insulin-like growth factor 2 mRNA-binding protein 1 isoform 1 [Homo
sapiens]
gi|296202548|ref|XP_002748506.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Callithrix jacchus]
gi|297715965|ref|XP_002834307.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Pongo abelii]
gi|332259442|ref|XP_003278798.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Nomascus leucogenys]
gi|354483617|ref|XP_003503989.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Cricetulus griseus]
gi|402899533|ref|XP_003912749.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Papio anubis]
gi|296434536|sp|Q9NZI8.2|IF2B1_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=Coding region determinant-binding protein;
Short=CRD-BP; AltName: Full=IGF-II mRNA-binding protein
1; AltName: Full=VICKZ family member 1; AltName:
Full=Zip code-binding protein 1; Short=ZBP-1;
Short=Zipcode-binding protein 1
gi|4191608|gb|AAD09826.1| IGF-II mRNA-binding protein 1 [Homo sapiens]
gi|157170258|gb|AAI52771.1| Insulin-like growth factor 2 mRNA binding protein 1 [synthetic
construct]
gi|162318726|gb|AAI56958.1| Insulin-like growth factor 2 mRNA binding protein 1 [synthetic
construct]
gi|168275834|dbj|BAG10637.1| insulin-like growth factor 2 mRNA-binding protein 1 [synthetic
construct]
gi|189053788|dbj|BAG36040.1| unnamed protein product [Homo sapiens]
gi|355568496|gb|EHH24777.1| hypothetical protein EGK_08493 [Macaca mulatta]
Length = 577
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|431890756|gb|ELK01635.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Pteropus
alecto]
Length = 577
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVAGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|386771588|ref|NP_001246874.1| mushroom-body expressed, isoform I [Drosophila melanogaster]
gi|383292064|gb|AFH04545.1| mushroom-body expressed, isoform I [Drosophila melanogaster]
Length = 539
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 135/309 (43%), Gaps = 63/309 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R + +++GSIIG+ GEIV + R ++ +KI I + GS ER+VTV
Sbjct: 27 RLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD---GSCPERIVTV------------ 71
Query: 105 GDKFVSPAQDALFKVHDRVIAE-ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
S +A+F + + E D G Q+ +L+VP+ Q G +IGK G ++
Sbjct: 72 -----SGTTNAIFSAFTLITKKFEEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIK 126
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL- 222
IR TG I++ E LP+ R+ V +SG A + + + QI + ++P R +
Sbjct: 127 EIRQTTGCSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESPPRGATIP 182
Query: 223 ----------LASAISNSHSSSGSLVGPT---AATP----IVGIAPLMGP--YGG--YKG 261
+ A + + G+ PT A P M P GG + G
Sbjct: 183 YRPKPQVTGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTG 242
Query: 262 D-------TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN--IGGVIGKGGAIINQIRQE 312
AG R+ A R E + V+N IG +IGKGG I +IRQ
Sbjct: 243 SAPAALAALAGSQLRTANPANRAQQQQHEMT------VSNDLIGCIIGKGGTKIAEIRQI 296
Query: 313 SGAAIKVDS 321
SGA I++ +
Sbjct: 297 SGAMIRISN 305
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 17/161 (10%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S + ++TVS
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSC--PERIVTVS------ 72
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTT---RLLVPTSRIGCLIGKGGSIITEMRR 397
T +A A + + E D G + T RL+VP S+ G LIGK GS I E+R+
Sbjct: 73 GTTNAIFSAFTLITKKFEEF--NDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 130
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
T +I++ E LP + + V +SG + + Q+
Sbjct: 131 TTGCSIQVA-SEMLP---NSTERAVTLSGSAEQITQCIYQI 167
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ V IGC+IGKGG+ I E+R+++ A IRI E + D + ISG+ D
Sbjct: 272 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSVAL 329
Query: 434 A--LIQVMTRL-RANLFDR 449
A LI + L +ANL ++
Sbjct: 330 AQYLINMSVELQKANLLEQ 348
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
+LR ++ Q ++ V +D IGC+IGKGG + IR +GA IRI E
Sbjct: 255 QLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGG-- 312
Query: 187 RSDELVQISGEASVVKKALCQ 207
+D + ISG V AL Q
Sbjct: 313 NTDRTITISGNPDSV--ALAQ 331
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV R E+GA+I I D P + +V +SG +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTN 76
Query: 200 VVKKALCQIASRLHD 214
+ A I + +
Sbjct: 77 AIFSAFTLITKKFEE 91
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSAS 96
+G R + P + GS+IG+ G +K++R T I++ E +P S ER VT+ ++
Sbjct: 98 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 157
Query: 97 DE 98
++
Sbjct: 158 EQ 159
>gi|73966275|ref|XP_548184.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 2 [Canis lupus familiaris]
gi|301762950|ref|XP_002916873.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Ailuropoda melanoleuca]
gi|410980809|ref|XP_003996768.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Felis catus]
gi|281344391|gb|EFB19975.1| hypothetical protein PANDA_005026 [Ailuropoda melanoleuca]
Length = 577
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|113677906|ref|NP_001038254.1| neuro-oncological ventral antigen 1 [Danio rerio]
gi|213624727|gb|AAI71499.1| Neuro-oncological ventral antigen 1 [Danio rerio]
gi|213627516|gb|AAI71495.1| Neuro-oncological ventral antigen 1 [Danio rerio]
Length = 495
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 108/231 (46%), Gaps = 24/231 (10%)
Query: 25 KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET--- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 47 KRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 98
Query: 82 VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVT 141
PG+ ERV + + N + F++ + + + + + + ++
Sbjct: 99 YPGTTERVCLIQGTVEALNGVHN---FIAEKVREMPQSSQKTEPVSILQPQTTVNPDRIK 155
Query: 142 -AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 156 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQ 212
Query: 201 VKKALCQIASRLHDNPSRSQHL------LASAISNSHSSSGSLVGPTAATP 245
+KA+ I ++ ++P S L + ++NS+ + T P
Sbjct: 213 NRKAVEIIVQKIQEDPQSSSCLNISYSNITGPVANSNPTGSPFANSTEVLP 263
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 41/186 (22%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E+ L+++ P G +IGKGG I Q+++E+GA IK+ SK+F+ T
Sbjct: 56 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS-------------KSKDFYPGT 102
Query: 343 ------LSATIEAV----------VRLQPRCSEKIERDSGLISFTT---------RLLVP 377
+ T+EA+ VR P+ S+K E S L TT +L+VP
Sbjct: 103 TERVCLIQGTVEALNGVHNFIAEKVREMPQSSQKTEPVSILQPQTTVNPDRIKQAKLIVP 162
Query: 378 TSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQ 437
S G +IGKGG+ + + + A +++ K P+ + + +V +SG+ + + A+
Sbjct: 163 NSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQNRKAVEI 219
Query: 438 VMTRLR 443
++ +++
Sbjct: 220 IVQKIQ 225
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 112 AQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
A + ++A L G E ++GG +V ++ VP + +G ++GKGG+ + + TG
Sbjct: 382 ASNGYLNPSSPLVASSLLGTEKLAEGGKEVV-EIAVPENLVGAILGKGGKTLVEYQELTG 440
Query: 171 AQIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
A+I+I K E +P R V I+G + + A I+ R+
Sbjct: 441 ARIQISKKGEFIPGTRNRK---VTITGSPAATQAAQYLISQRI 480
>gi|350405177|ref|XP_003487350.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus impatiens]
Length = 466
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 92/171 (53%), Gaps = 23/171 (13%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIVK+ R ++ +KI I + GS ER+VTV ++ + F+
Sbjct: 27 KEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTGPTN--SIFKAFTLICK 81
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGG---HQVTAKLLVPSDQIGCVIGKGGQIVQNIRS 167
++ + HD ++G GG +T +L+VP+ Q G +IGKGG ++ IR
Sbjct: 82 KFEEWCSQFHD------IQGS----GGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIRE 131
Query: 168 ETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
TGA I++ D LP+ R+ V ISG + + + + I + ++P +
Sbjct: 132 VTGASIQVASD-MLPNSTERA---VTISGTSEAITQCIYHICCVMLESPPK 178
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+D S ++RL+ +G +IGK G I+ + R+ESGA I + S +T +
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTN 70
Query: 337 EFFEDTLSATIEAVVRLQPRCSE--KIERDSGLI--SFTTRLLVPTSRIGCLIGKGGSII 392
F+ A + + CS+ I+ G+ T RL+VP S+ G LIGKGGS I
Sbjct: 71 SIFK----AFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKI 126
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
E+R +T A+I++ + LP + + V ISG
Sbjct: 127 KEIREVTGASIQVA-SDMLP---NSTERAVTISG 156
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 67/213 (31%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV+ R E+GA+I I SC R +V ++G +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG----SCPER---IVTVTGPTN 70
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I + + S H GS GG
Sbjct: 71 SIFKAFTLICKKFEE-----------WCSQFHDIQGS--------------------GG- 98
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
PR + +LRL+ P + G +IGKGG+ I +IR+ +GA+I+V
Sbjct: 99 --------------VPRPPI-----TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQV 139
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR 352
S D L + + T+S T EA+ +
Sbjct: 140 AS------DMLPNSTERAV---TISGTSEAITQ 163
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + VP IGC+IGKGG+ I E+R+++ A IRI E + D + I+G+ D
Sbjct: 273 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDA 330
Query: 431 AKDALIQVMTRLRANL 446
AL Q + + L
Sbjct: 331 V--ALAQYLISMSVEL 344
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T ++ VP++ IGC+IGKGG + IR +GA IRI E A +D + I+G
Sbjct: 273 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA--TDRTITITGNPDA 330
Query: 201 VKKALCQ 207
V AL Q
Sbjct: 331 V--ALAQ 335
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + GS+IG+GG +K++R T + I++ + +P S ER VT+ S+
Sbjct: 107 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDMLPNSTERAVTISGTSE 159
>gi|348558005|ref|XP_003464809.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Cavia porcellus]
Length = 483
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
+ G KR TG+D F+ + L P GSIIG+GG+ + QL+ +T + I++
Sbjct: 35 EAGSTKRTNTGEDGQYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 86
Query: 80 ET---VPGSEERVVTVYSASDETNAFED--GDKFVSPAQDALFKVHDRVIAEELRGDEDS 134
++ PG+ ERV + + NA +K Q+ ++ + + D
Sbjct: 87 KSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDR 146
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
QV K++VP+ G +IGKGG V+ I ++GA +++ P + +V +
Sbjct: 147 I--KQV--KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL---SQKPDGINLQERVVTV 199
Query: 195 SGEASVVKKALCQIASRLHDNP 216
SGE +KA+ I ++ ++P
Sbjct: 200 SGEPEQNRKAVELIIQKIQEDP 221
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
++ L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI + +
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + I +R P+ K E S L TT +++VP S G +IGKG
Sbjct: 109 L--NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKG 166
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P + + +V +SG+ + + A+ ++ +++
Sbjct: 167 GATVKAIMEQSGAWVQLSQK---PDGINLQERVVTVSGEPEQNRKAVELIIQKIQ 218
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + F + A + G E S G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 370 ATNGYFGAASPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 429
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I R+
Sbjct: 430 RIQISKKGEFVPGTRNRK---VTITGTPAATQAAQYLITQRI 468
>gi|363746094|ref|XP_003643523.1| PREDICTED: poly(rC)-binding protein 4-like, partial [Gallus gallus]
Length = 239
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 30/195 (15%)
Query: 27 RYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS- 85
R +G Q I R L ++IGSIIG+ GE VK++R + ++I I E GS
Sbjct: 6 RASGPREPQLSI---TLTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISE---GSC 59
Query: 86 EERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVI--AEELRGDEDSDGGHQVTAK 143
ER+ T+ ++D A+F+ + EE GD + G VT +
Sbjct: 60 PERITTITGSTD-----------------AVFRAVSMIAFKLEEDLGDGTAAGRTPVTLR 102
Query: 144 LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKK 203
L++P+ Q G +IGK G ++ IR +GAQ+++ D LP+ R+ V +SG + +
Sbjct: 103 LVIPASQCGSLIGKAGTKIREIRESSGAQVQVAGD-LLPNSTERA---VTVSGVPDTIIQ 158
Query: 204 ALCQIASRLHDNPSR 218
+ QI + + ++P +
Sbjct: 159 CVRQICAVILESPPK 173
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 94/194 (48%), Gaps = 28/194 (14%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
S PR+ S +LR++ IG +IGK G + +IR++S A I + S C
Sbjct: 8 SGPREPQLSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGS-----CPER 62
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERD------SGLISFTTRLLVPTSRIGCLIG 386
++ T++ + +AV R + K+E D +G T RL++P S+ G LIG
Sbjct: 63 IT-------TITGSTDAVFRAVSMIAFKLEEDLGDGTAAGRTPVTLRLVIPASQCGSLIG 115
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
K G+ I E+R + A +++ + LP + + V +SG D +IQ + ++ A +
Sbjct: 116 KAGTKIREIRESSGAQVQVA-GDLLP---NSTERAVTVSG----VPDTIIQCVRQICAVI 167
Query: 447 FDR--EGAVSTFVP 458
+ +GA + P
Sbjct: 168 LESPPKGATIPYHP 181
>gi|48716278|dbj|BAD22893.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
gi|48716520|dbj|BAD23125.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
Length = 343
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS---TEGDDCLITV 333
+D K LR + G +IGKGG+ IN+ + +SGA I++ S +D +I V
Sbjct: 34 EDDKEKPTHLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMV 93
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
S F++ + A +E + L+ +E E + RL+VP S G +IGKGGS I
Sbjct: 94 SG--LFDEVIKA-MELI--LEKLLAEGEESNEAEARPKVRLVVPNSSCGGIIGKGGSTIK 148
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
+ A I+I P++N D +V ++G LD A+ ++++L ++
Sbjct: 149 SFIEDSHAGIKISPQDN--NFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPNLS 206
Query: 454 STF 456
S F
Sbjct: 207 SPF 209
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 141/328 (42%), Gaps = 32/328 (9%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSASDET 99
T R+L G IIG+GG + + + + ++I++ E PG+ +R++ V DE
Sbjct: 41 THLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEV 100
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
A+ + ++++AE G+E ++ + +L+VP+ G +IGKGG
Sbjct: 101 -------------IKAMELILEKLLAE---GEESNEAEARPKVRLVVPNSSCGGIIGKGG 144
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL----HDN 215
+++ ++ A I+I ++ + D LV ++G +A+ I S+L H
Sbjct: 145 STIKSFIEDSHAGIKISPQDN--NFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYP 202
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
P+ S + + S G VG A GP GY G + + +P
Sbjct: 203 PNLSSPFPYAGLGFP-SYPGVPVGYMIPQVPYNNAVNYGP-NGYGGRYQNNKPSTPMRSP 260
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
++ + SL + +IG V+G+ G I +I Q SGA IK+ S GD T
Sbjct: 261 ANN--DAQDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKI---SDRGDFIAGTSER 315
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIER 363
K T A A + R + ER
Sbjct: 316 KVTITGTSEAIQAAESMIMQRVTASSER 343
>gi|194701786|gb|ACF84977.1| unknown [Zea mays]
Length = 344
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 146/347 (42%), Gaps = 49/347 (14%)
Query: 30 GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSE 86
GDD+++ I R+L G IIG+GG + + + ++I++ E PG+
Sbjct: 33 GDDKEKPI------HLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTN 86
Query: 87 ERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+R++ V E A+ + ++++AE G+E ++ + +L+V
Sbjct: 87 DRIIMVSGLFGEV-------------MKAMELILEKLLAE---GEEFNEAEARPKVRLVV 130
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALC 206
P+ G +IGKGG +++ E+ A I+I ++ + D LV ++G A+
Sbjct: 131 PNSSCGGIIGKGGATIKSFIEESHAGIKISPQDN--NYVGLHDRLVTVTGTFDNQMNAID 188
Query: 207 QIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM--------GPYGG 258
I +L S H A+ +S+ +G P+ + P + GP G
Sbjct: 189 LILKKL----SEDVHYPAN-LSSPFPYAGLTFPSYPGVPVGYMIPQVPYNNAVNYGPNNG 243
Query: 259 YKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVA--NIGGVIGKGGAIINQIRQESGAA 316
Y G + + S P +S E L +A +IG V+G+ G I +I Q SGA
Sbjct: 244 Y----GGRYQNNKPSTPMRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEIIQASGAR 299
Query: 317 IKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIER 363
IK+ S GD T K T A A + R S ER
Sbjct: 300 IKI---SDRGDFISGTSDRKVTITGTSEAIRTAESMIMQRVSASSER 343
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 10/168 (5%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS---TEGDDCLITVS 334
D K LR + A+ G +IGKGG+ IN + +SGA I++ S +D +I VS
Sbjct: 34 DDKEKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVS 93
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITE 394
F + + A +E + L+ +E E + RL+VP S G +IGKGG+ I
Sbjct: 94 G--LFGEVMKA-MELI--LEKLLAEGEEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKS 148
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
+ A I+I P++N D +V ++G D +A+ ++ +L
Sbjct: 149 FIEESHAGIKISPQDN--NYVGLHDRLVTVTGTFDNQMNAIDLILKKL 194
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSD 189
+E D + + LV + GC+IGKGG + + +S++GA+I++ + E P +D
Sbjct: 31 EEGDDKEKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGT---ND 87
Query: 190 ELVQISGEASVVKKALCQIASRL 212
++ +SG V KA+ I +L
Sbjct: 88 RIIMVSGLFGEVMKAMELILEKL 110
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 10/105 (9%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV---DSSSTEGDDCLITVSSKEFFEDT 342
+RLV P ++ GG+IGKGGA I +ES A IK+ D++ D L+TV+ F++
Sbjct: 126 VRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTVTGT--FDNQ 183
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLIS-FTTRLLVPTSRIGCLIG 386
++A I+ +++ + SE + + L S F L S G +G
Sbjct: 184 MNA-IDLILK---KLSEDVHYPANLSSPFPYAGLTFPSYPGVPVG 224
>gi|314122361|ref|NP_001186642.1| RNA-binding protein Nova-1 isoform 2 [Gallus gallus]
gi|114652477|ref|XP_001170656.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Pan troglodytes]
gi|224051380|ref|XP_002200538.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Taeniopygia
guttata]
gi|291403673|ref|XP_002718161.1| PREDICTED: neuro-oncological ventral antigen 1 isoform 2
[Oryctolagus cuniculus]
gi|296214718|ref|XP_002753742.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Callithrix
jacchus]
gi|297694851|ref|XP_002824681.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Pongo abelii]
gi|332223199|ref|XP_003260755.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Nomascus
leucogenys]
gi|344273489|ref|XP_003408554.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Loxodonta
africana]
gi|345804243|ref|XP_860979.2| PREDICTED: RNA-binding protein Nova-1 isoform 6 [Canis lupus
familiaris]
gi|395838272|ref|XP_003792041.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Otolemur
garnettii]
gi|410962022|ref|XP_003987576.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Felis catus]
gi|426376606|ref|XP_004055088.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Gorilla
gorilla gorilla]
gi|122064615|sp|Q2PFW9.1|NOVA1_MACFA RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1; AltName:
Full=Ventral neuron-specific protein 1
gi|84579135|dbj|BAE73001.1| hypothetical protein [Macaca fascicularis]
gi|90079349|dbj|BAE89354.1| unnamed protein product [Macaca fascicularis]
gi|380813128|gb|AFE78438.1| RNA-binding protein Nova-1 isoform 2 [Macaca mulatta]
Length = 483
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
+ G KR TG+D F+ + L P GSIIG+GG+ + QL+ +T + I++
Sbjct: 35 EAGSTKRTNTGEDGQYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 86
Query: 80 ET---VPGSEERVVTVYSASDETNAFED--GDKFVSPAQDALFKVHDRVIAEELRGDEDS 134
++ PG+ ERV + + NA +K Q+ ++ + + D
Sbjct: 87 KSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDR 146
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
QV K++VP+ G +IGKGG V+ I ++GA +++ P + +V +
Sbjct: 147 I--KQV--KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL---SQKPDGINLQERVVTV 199
Query: 195 SGEASVVKKALCQIASRLHDNP 216
SGE +KA+ I ++ ++P
Sbjct: 200 SGEPEQNRKAVELIIQKIQEDP 221
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
++ L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI + +
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + I +R P+ K E S L TT +++VP S G +IGKG
Sbjct: 109 L--NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKG 166
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P + + +V +SG+ + + A+ ++ +++
Sbjct: 167 GATVKAIMEQSGAWVQLSQK---PDGINLQERVVTVSGEPEQNRKAVELIIQKIQ 218
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + F + A + G E S G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 370 ATNGYFGAASPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 429
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I R+
Sbjct: 430 RIQISKKGEFVPGTRNRK---VTITGTPAATQAAQYLITQRI 468
>gi|340726176|ref|XP_003401437.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus terrestris]
Length = 466
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 92/171 (53%), Gaps = 23/171 (13%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIVK+ R ++ +KI I + GS ER+VTV ++ + F+
Sbjct: 27 KEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTGPTN--SIFKAFTLICK 81
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGG---HQVTAKLLVPSDQIGCVIGKGGQIVQNIRS 167
++ + HD ++G GG +T +L+VP+ Q G +IGKGG ++ IR
Sbjct: 82 KFEEWCSQFHD------IQGS----GGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIRE 131
Query: 168 ETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
TGA I++ D LP+ R+ V ISG + + + + I + ++P +
Sbjct: 132 VTGASIQVASD-MLPNSTERA---VTISGTSEAITQCIYHICCVMLESPPK 178
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+D S ++RL+ +G +IGK G I+ + R+ESGA I + S +T +
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTN 70
Query: 337 EFFEDTLSATIEAVVRLQPRCSE--KIERDSGLI--SFTTRLLVPTSRIGCLIGKGGSII 392
F+ A + + CS+ I+ G+ T RL+VP S+ G LIGKGGS I
Sbjct: 71 SIFK----AFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKI 126
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
E+R +T A+I++ + LP + + V ISG
Sbjct: 127 KEIREVTGASIQVA-SDMLP---NSTERAVTISG 156
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 67/213 (31%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV+ R E+GA+I I SC R +V ++G +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG----SCPER---IVTVTGPTN 70
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I + + S H GS GG
Sbjct: 71 SIFKAFTLICKKFEE-----------WCSQFHDIQGS--------------------GG- 98
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
PR + +LRL+ P + G +IGKGG+ I +IR+ +GA+I+V
Sbjct: 99 --------------VPRPPI-----TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQV 139
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR 352
S D L + + T+S T EA+ +
Sbjct: 140 AS------DMLPNSTERAV---TISGTSEAITQ 163
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+ G+ T ++ VP++ IGC+IGKGG + IR +GA IRI E A +D
Sbjct: 263 NRQQPAGNNQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA--TDR 320
Query: 191 LVQISGEASVVKKALCQ 207
+ I+G V AL Q
Sbjct: 321 TITITGNPDAV--ALAQ 335
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + VP IGC+IGKGG+ I E+R+++ A IRI E + D + I+G+ D
Sbjct: 273 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDA 330
Query: 431 AKDALIQVMTRLRANL 446
AL Q + + L
Sbjct: 331 V--ALAQYLISMSVEL 344
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + GS+IG+GG +K++R T + I++ + +P S ER VT+ S+
Sbjct: 107 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDMLPNSTERAVTISGTSE 159
>gi|324519086|gb|ADY47282.1| Poly(rC)-binding protein 3 [Ascaris suum]
Length = 342
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 22/178 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ G+ +K +R + +KI I + GS ER+VT+ D N
Sbjct: 26 RLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISD---GSCPERIVTITGNVDTINK--- 79
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
F + E+++ +S +T +L+VP+ Q G +IGKGG ++
Sbjct: 80 -----------AFSMICNKFQEDMQALPNSVPKPPITMRLIVPATQCGSLIGKGGSKIKE 128
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
IR TGA I++ E LPS R+ V ISG A + + I L + P + L
Sbjct: 129 IREATGASIQV-ASEMLPSSTERA---VTISGSADAIVLCMQHICHILLEAPPKGTTL 182
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G I IR SGA I + S + ++T++ DT+
Sbjct: 23 LTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISDGSCP--ERIVTITGNV---DTI 77
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
+ + + + T RL+VP ++ G LIGKGGS I E+R T A+I
Sbjct: 78 NKAFSMICNKFQEDMQALPNSVPKPPITMRLIVPATQCGSLIGKGGSKIKEIREATGASI 137
Query: 404 RILPKENLPKIASEDDEMVQISGDLD 429
++ E LP S + V ISG D
Sbjct: 138 QVA-SEMLP---SSTERAVTISGSAD 159
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 79/190 (41%), Gaps = 67/190 (35%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G +++IR +GA+I I SC R +V I+G
Sbjct: 23 LTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISDG----SCPER---IVTITGNVD 75
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I ++ ++ A+ N
Sbjct: 76 TINKAFSMICNKFQED--------MQALPN------------------------------ 97
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S P+ ++ +RL+ P G +IGKGG+ I +IR+ +GA+I+V
Sbjct: 98 -------------SVPKPPIT-----MRLIVPATQCGSLIGKGGSKIKEIREATGASIQV 139
Query: 320 DS----SSTE 325
S SSTE
Sbjct: 140 ASEMLPSSTE 149
>gi|242020720|ref|XP_002430800.1| predicted protein [Pediculus humanus corporis]
gi|212515997|gb|EEB18062.1| predicted protein [Pediculus humanus corporis]
Length = 515
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 173/392 (44%), Gaps = 52/392 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE-T 99
D R L +G+IIGR G ++Q+ T++++ + + GS E+ +T+Y D T
Sbjct: 113 DFPLRILVQSDMVGAIIGRQGTTIRQITQQTRARVDVHRKDNVGSLEKAITIYGNPDNCT 172
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
NA + I E ++ + + +++ K+L ++ IG +IGKGG
Sbjct: 173 NACKK-------------------ILEVMQAEASNTNKGEISLKILAHNNLIGRIIGKGG 213
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
++ I +T ++I + + S L + ++ + G + +A +I+++L +
Sbjct: 214 NTIKRIMQDTDSKITVSSINDINSFNL--ERIITVKGTIDNMSRAESEISAKLRQS---Y 268
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL------YS 273
++ L + + G +T +G + G +GG G A +
Sbjct: 269 ENDLQAMAPQTMMFPGLHPMAMMSTNNMGYSSRPGAFGGVYGSGAPIPYSPIYPPAGPQQ 328
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
P S+E + L P + +G +IG G I I + SGA++K+ +S E +
Sbjct: 329 GPSQGGDSQETTF-LFIPNSAVGAIIGTKGTHIRNIIRFSGASVKI--ASLEQEKGTEPP 385
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLI-------SFTTRLLVPTSRIGCLIG 386
+ ++ T+ T E+ + Q EK+ R+ G I T +LV G +IG
Sbjct: 386 AERKV---TIVGTPESQWKAQYLIFEKM-REEGFIGSGNDDVKLTVEILV-----GRIIG 436
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASED 418
KGG + E++ T + I+ LP++ A E+
Sbjct: 437 KGGQNVRELQHATGSIIK-LPEQGAAPPAQEE 467
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 10/170 (5%)
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITV 333
P +F LR++ +G +IG+ G I QI Q++ A + V G + IT+
Sbjct: 105 PAASARQTDFPLRILVQSDMVGAIIGRQGTTIRQITQQTRARVDVHRKDNVGSLEKAITI 164
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
D + + + L+ +E + G IS ++L + IG +IGKGG+ I
Sbjct: 165 YGN---PDNCTNACKKI--LEVMQAEASNTNKGEISL--KILAHNNLIGRIIGKGGNTIK 217
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
+ + T + I + ++ E ++ + G +D A ++ +LR
Sbjct: 218 RIMQDTDSKITVSSINDINSFNLE--RIITVKGTIDNMSRAESEISAKLR 265
>gi|119615102|gb|EAW94696.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_b
[Homo sapiens]
Length = 463
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 81 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 140
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 141 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 183
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 184 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVREA--- 236
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 237 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 292
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 293 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 341
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 342 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 397
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 398 ELQNLTAAEV-VVPRDQTP---DENDQVI 422
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 285 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 344
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 345 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 381
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 382 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 413
>gi|390597786|gb|EIN07185.1| hypothetical protein PUNSTDRAFT_53562 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 356
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 116/263 (44%), Gaps = 34/263 (12%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIG+GG V ++R + +++ + E++PG+ ER++ V D A
Sbjct: 68 IIGKGGAHVNEIRQKSGARVVVSESIPGNPERILNVSGPLD--------------AVSKA 113
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT K ++P+ ++G VIGKGG ++ I+ +GA++
Sbjct: 114 FGLIVRRINDEPFDSASVPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQEASGARLN-A 172
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
+ LP ++ ++ +SG A + A I + L + R H S+ S S
Sbjct: 173 SEGMLPGS---TERVLSVSGVADAIHIATYYIGNILIEANERQPHAANSSYRPSSYSRRP 229
Query: 237 LVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIG 296
T + V G Y TA + L +++ + P +G
Sbjct: 230 PYPATGGSSYV-----PGYTNPYPPPTAAALAHG-------QLQTQQIYI----PNDLVG 273
Query: 297 GVIGKGGAIINQIRQESGAAIKV 319
+IGKGGA IN+IR S + IK+
Sbjct: 274 CIIGKGGAKINEIRHMSASQIKI 296
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRL---Q 354
+IGKGGA +N+IRQ+SGA + V S + ++ VS D +S +VR +
Sbjct: 68 IIGKGGAHVNEIRQKSGARVVVSESIPGNPERILNVSGP---LDAVSKAFGLIVRRINDE 124
Query: 355 PRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
P S + G + T + ++P SR+G +IGKGGS I E++ + A +
Sbjct: 125 PFDSASV---PGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQEASGARL 170
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 95/208 (45%), Gaps = 48/208 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETNAFED 104
+++ P ++GS+IG+GG +K+++ + +++ E +PGS ERV++V +D A
Sbjct: 140 KFMIPNSRMGSVIGKGGSKIKEIQEASGARLNASEGMLPGSTERVLSVSGVAD---AIHI 196
Query: 105 GDKFVSPAQDALFKVHDR-----------------VIAEELRGDEDSDG----------- 136
++ + L + ++R G G
Sbjct: 197 ATYYIG---NILIEANERQPHAANSSYRPSSYSRRPPYPATGGSSYVPGYTNPYPPPTAA 253
Query: 137 ----GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD--------EHLPSC 184
G T ++ +P+D +GC+IGKGG + IR + +QI+I++ + P+
Sbjct: 254 ALAHGQLQTQQIYIPNDLVGCIIGKGGAKINEIRHMSASQIKIMEPGATGQAGADGAPAG 313
Query: 185 ALRSDELVQISGEASVVKKALCQIASRL 212
+ ++ LV I+G + ++ A+ + SRL
Sbjct: 314 S-ENERLVVITGAPANIQMAVQLLYSRL 340
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 63/235 (26%)
Query: 269 RSLYSAPRDDLS---SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE 325
R + P D S S+ +++ + P + +G VIGKGG+ I +I++ SGA +
Sbjct: 119 RRINDEPFDSASVPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQEASGARLNASEGMLP 178
Query: 326 GD-DCLITVS--------SKEFFEDTLSATIEAVVRLQPRCSEKIERD-----------S 365
G + +++VS + + + L IEA R QP + R +
Sbjct: 179 GSTERVLSVSGVADAIHIATYYIGNIL---IEANER-QPHAANSSYRPSSYSRRPPYPAT 234
Query: 366 GLISF----------------------TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
G S+ T ++ +P +GC+IGKGG+ I E+R ++ + I
Sbjct: 235 GGSSYVPGYTNPYPPPTAAALAHGQLQTQQIYIPNDLVGCIIGKGGAKINEIRHMSASQI 294
Query: 404 RILPK--------ENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDRE 450
+I+ + P SE++ +V I+G A IQ+ +L + ++E
Sbjct: 295 KIMEPGATGQAGADGAPA-GSENERLVVITG-----APANIQMAVQLLYSRLEQE 343
>gi|328778258|ref|XP_391921.3| PREDICTED: poly(rC)-binding protein 3-like [Apis mellifera]
Length = 466
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 92/171 (53%), Gaps = 23/171 (13%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIVK+ R ++ +KI I + GS ER+VTV ++ + F+
Sbjct: 27 KEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTGPTN--SIFKAFTLICK 81
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGG---HQVTAKLLVPSDQIGCVIGKGGQIVQNIRS 167
++ + HD ++G GG +T +L+VP+ Q G +IGKGG ++ IR
Sbjct: 82 KFEEWCSQFHD------IQGS----GGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIRE 131
Query: 168 ETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
TGA I++ D LP+ R+ V ISG + + + + I + ++P +
Sbjct: 132 VTGASIQVASD-MLPNSTERA---VTISGTSEAITQCIYHICCVMLESPPK 178
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+D S ++RL+ +G +IGK G I+ + R+ESGA I + S +T +
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTN 70
Query: 337 EFFEDTLSATIEAVVRLQPRCSE--KIERDSGLI--SFTTRLLVPTSRIGCLIGKGGSII 392
F+ A + + CS+ I+ G+ T RL+VP S+ G LIGKGGS I
Sbjct: 71 SIFK----AFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKI 126
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
E+R +T A+I++ + LP + + V ISG
Sbjct: 127 KEIREVTGASIQVA-SDMLP---NSTERAVTISG 156
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 67/213 (31%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV+ R E+GA+I I SC R +V ++G +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG----SCPER---IVTVTGPTN 70
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I + + S H GS GG
Sbjct: 71 SIFKAFTLICKKFEE-----------WCSQFHDIQGS--------------------GG- 98
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
PR + +LRL+ P + G +IGKGG+ I +IR+ +GA+I+V
Sbjct: 99 --------------VPRPPI-----TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQV 139
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR 352
S D L + + T+S T EA+ +
Sbjct: 140 AS------DMLPNSTERAV---TISGTSEAITQ 163
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + VP IGC+IGKGG+ I E+R+++ A IRI E + D + I+G+ D
Sbjct: 273 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDA 330
Query: 431 AKDA--LIQVMTRL-RANL 446
A LI + L +ANL
Sbjct: 331 VSLAQYLISMSVELQKANL 349
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T ++ VP++ IGC+IGKGG + IR +GA IRI E A +D + I+G
Sbjct: 273 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA--TDRTITITGNPDA 330
Query: 201 VKKA 204
V A
Sbjct: 331 VSLA 334
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + GS+IG+GG +K++R T + I++ + +P S ER VT+ S+
Sbjct: 107 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDMLPNSTERAVTISGTSE 159
>gi|68475799|ref|XP_718106.1| hypothetical protein CaO19.5771 [Candida albicans SC5314]
gi|68475932|ref|XP_718039.1| hypothetical protein CaO19.13193 [Candida albicans SC5314]
gi|46439785|gb|EAK99099.1| hypothetical protein CaO19.13193 [Candida albicans SC5314]
gi|46439861|gb|EAK99174.1| hypothetical protein CaO19.5771 [Candida albicans SC5314]
gi|238882982|gb|EEQ46620.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 529
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 132/360 (36%), Gaps = 57/360 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R CP+++ +I+GR GE + LR +I + E + G ER+V V
Sbjct: 163 RMYCPVKEASTIVGRKGETINHLREKANVRITVSENLKGVPERIVAVK------------ 210
Query: 106 DKFVSPAQDA--LFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
PA++ F + RVI EE + S Q KLL+P IG +IGK G +
Sbjct: 211 ----GPAENVARAFGLITRVILEEPEDEPASINSQQYNLKLLIPHPMIGFIIGKQGLKFR 266
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL--HDNPSRSQH 221
I + A+++ ++ + +D ++ + G + A+ IA + H +
Sbjct: 267 EIEENSAAKLKAAEN----ALPYSTDRVLSVMGVGDAIHIAVYYIAQVMLEHKEVLKKHK 322
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSS 281
++ +N + SL G P M GY+ P+ S
Sbjct: 323 VVLYNPANYQPTDQSLGGRQRQPPSNSYNNPM----GYQAKLP-----PFSKPPQHQQSP 373
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS--STEGDDCLITVSSKEFF 339
FS+ V Q G+ + + + S G + + + F
Sbjct: 374 YNFSMMFQPAVQ----------------PQHFGSPVTSNPNAVSPVGMQPSVNIPPQNQF 417
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
D TI V P +G + + V S IG +IGK G+ I +R +
Sbjct: 418 TDEFGNTIVGEVITTPPIQ------AGQDKYNQDVFVANSSIGSVIGKRGNNIKHIRETS 471
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 11/132 (8%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
RDD + LR+ CPV ++G+ G IN +R+++ I V + + ++ V
Sbjct: 154 RDDPTF--IQLRMYCPVKEASTIVGRKGETINHLREKANVRITVSENLKGVPERIVAVKG 211
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS---FTTRLLVPTSRIGCLIGKGGSII 392
+ ++ + R+ E+ E + I+ + +LL+P IG +IGK G
Sbjct: 212 P---AENVARAFGLITRV---ILEEPEDEPASINSQQYNLKLLIPHPMIGFIIGKQGLKF 265
Query: 393 TEMRRLTKANIR 404
E+ + A ++
Sbjct: 266 REIEENSAAKLK 277
>gi|426347646|ref|XP_004041460.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Gorilla gorilla gorilla]
Length = 525
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 172/394 (43%), Gaps = 65/394 (16%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 143 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 202
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 203 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 245
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
++ + +T +I I L+D L + + + G +A +I ++ ++N
Sbjct: 246 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVREAYEN 301
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG--PYGGYKGDTAGDWSRSLYS 273
+ L + I + ++ L +++ + + G PY S
Sbjct: 302 DVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYS------------SFMQ 349
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
AP ++ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 350 APEQEM------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI 403
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKG 388
++ EA + Q R K++ ++ + T + VP S G +IGKG
Sbjct: 404 ---------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKG 454
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
G + E++ LT A + ++P++ P E+D+++
Sbjct: 455 GKTVNELQNLTAAEV-VVPRDQTP---DENDQVI 484
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 347 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 406
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 407 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 443
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 444 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 475
>gi|332242553|ref|XP_003270449.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 2 [Nomascus leucogenys]
Length = 440
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 150/316 (47%), Gaps = 37/316 (11%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
++ K+L ++ +G +IGK G+ ++ I +T +I I + L + + + G
Sbjct: 137 EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSV 194
Query: 199 SVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGG 258
KA +I ++ ++ ++ +AS +H G + +G+ P P G
Sbjct: 195 ETCAKAEEEIMKKIRES---YENDIASMNVQTHLIPGLNLND------LGLFP---PTSG 242
Query: 259 YKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIK 318
T+G S P+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK
Sbjct: 243 MPPPTSGPPSAMTPPYPQFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIK 301
Query: 319 VDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTR 373
+ + E D + + ++ EA + Q R KI+ ++ + +
Sbjct: 302 I--APAEAPDAKVRMV-------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAH 352
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---D 429
+ VP+ G +IGKGG + E++ L+ A + ++P++ P E+D+ +V+I+G
Sbjct: 353 IRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQ 408
Query: 430 LAKDALIQVMTRLRAN 445
+A+ + +++T+++ +
Sbjct: 409 VAQRKIQEILTQVKQH 424
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 42/186 (22%)
Query: 35 QFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTV- 92
QF +TV+ ++ P +G+IIG+ G+ +KQL + I+I P ++ R+V +
Sbjct: 260 QFEQSETETVHLFI-PALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIIT 318
Query: 93 ------YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+ A + FVSP ++ + H R V
Sbjct: 319 GPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIR-----------------------V 355
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKAL 205
PS G VIGKGG+ V +++ + A++ + +D+ +D+ +V+I+G
Sbjct: 356 PSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQ----TPDENDQVVVKITGHFYA----- 406
Query: 206 CQIASR 211
CQ+A R
Sbjct: 407 CQVAQR 412
>gi|119615099|gb|EAW94693.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
gi|119615100|gb|EAW94694.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
gi|119615101|gb|EAW94695.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
Length = 441
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 59 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 118
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 119 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 161
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 162 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVREA--- 214
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 215 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 270
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 271 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 319
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 320 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 375
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 376 ELQNLTAAEV-VVPRDQTP---DENDQVI 400
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 263 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 322
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 323 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 359
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 360 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 391
>gi|115489418|ref|NP_001067196.1| Os12g0597600 [Oryza sativa Japonica Group]
gi|113649703|dbj|BAF30215.1| Os12g0597600, partial [Oryza sativa Japonica Group]
Length = 367
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 80/140 (57%), Gaps = 17/140 (12%)
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRC-------SEKIERDSGLISFTTRLLVPTSRI 381
C + +S+K+ + L ++ ++R+ R S++ +R +G + TRLLVP S+
Sbjct: 10 CPVMISAKDEPDAPLPPAVDGLLRVHKRITDGLDGESDQPQRAAGTVG-PTRLLVPASQA 68
Query: 382 GCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD-LDLAKDALIQVMT 440
G LIGK G+ I ++ +K +RIL E++P +A DD +V+I G+ LD+ K A+ + +
Sbjct: 69 GSLIGKQGATIKSIQDASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDVHK-AVELIAS 125
Query: 441 RLRANLFDREGAVSTFVPVF 460
LR L DR + +P+F
Sbjct: 126 HLRKFLVDR-----SVLPLF 140
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD---GGHQVTAKLLVPSDQIGCVIG 156
+A ++ D + PA D L +VH R I + L G+ D G +LLVP+ Q G +IG
Sbjct: 15 SAKDEPDAPLPPAVDGLLRVHKR-ITDGLDGESDQPQRAAGTVGPTRLLVPASQAGSLIG 73
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
K G +++I+ + +RIL E +P AL D +V+I GE V KA+ IAS L
Sbjct: 74 KQGATIKSIQDASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDVHKAVELIASHL 127
>gi|149051189|gb|EDM03362.1| neuro-oncological ventral antigen 1, isoform CRA_c [Rattus
norvegicus]
Length = 483
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
+ G KR TG+D F+ + L P GSIIG+GG+ + QL+ +T + I++
Sbjct: 35 EAGSTKRTNTGEDGQYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 86
Query: 80 ET---VPGSEERVVTVYSASDETNAFED--GDKFVSPAQDALFKVHDRVIAEELRGDEDS 134
++ PG+ ERV + + NA +K Q+ ++ + + D
Sbjct: 87 KSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDR 146
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
QV K++VP+ G +IGKGG V+ I ++GA +++ P + +V +
Sbjct: 147 I--KQV--KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL---SQKPDGINLQERVVTV 199
Query: 195 SGEASVVKKALCQIASRLHDNP 216
SGE +KA+ I ++ ++P
Sbjct: 200 SGEPEQNRKAVELIIQKIQEDP 221
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 41/186 (22%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
++ L+++ P G +IGKGG I Q+++E+GA IK+ SK+F+ T
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS-------------KSKDFYPGT 95
Query: 343 ------LSATIEAV----------VRLQPRCSEKIERDSGLISFTT---------RLLVP 377
+ TIEA+ +R P+ K E S L TT +++VP
Sbjct: 96 TERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVP 155
Query: 378 TSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQ 437
S G +IGKGG+ + + + A +++ K P + + +V +SG+ + + A+
Sbjct: 156 NSTAGLIIGKGGATVKAIMEQSGAWVQLSQK---PDGINLQERVVTVSGEPEQNRKAVEL 212
Query: 438 VMTRLR 443
++ +++
Sbjct: 213 IIQKIQ 218
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + F + A + G E S G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 370 ATNGYFGAASPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 429
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I R+
Sbjct: 430 RIQISKKGEFVPGTRNRK---VTITGTPAATQAAQYLITQRI 468
>gi|47226335|emb|CAG09303.1| unnamed protein product [Tetraodon nigroviridis]
Length = 760
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 145/325 (44%), Gaps = 43/325 (13%)
Query: 125 AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI--LKDEHLP 182
A E + ED + K++ ++ IG +IGK G+ ++ I ETG +I I L+D ++
Sbjct: 331 ANETKAMED------IPLKIIASNNYIGRLIGKQGRNLKKIEEETGTKITISSLQDLNI- 383
Query: 183 SCALRSDELVQISGEASVVKKALCQIASRL---HDNPSRSQHLLASAISNSH------SS 233
++ + + G A +I +L ++N + + S I + S
Sbjct: 384 ---YNNERTITVKGSLEACCNAEVEIMKKLREAYENDVAAINQQTSLIPGLNLNALGIFS 440
Query: 234 SGSLVGPTAATPIVGIAPL----MGPYGGYKGDTAGDWSRSLYSA-PRDDLSSKEFSLRL 288
S V P+AA P + P+ P+ G+ + + SA P + ++ L
Sbjct: 441 SALPVLPSAAGPRSTMPPVGPAGYNPFIGHSSHPSSLYGVPPASAIPHQHAAQEQEVAYL 500
Query: 289 VCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIE 348
P +G +IGK G I Q+ +GA+IK+ + + + ++ T E
Sbjct: 501 FIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAEKPDATERMVI---------ITGTPE 551
Query: 349 AVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
A + Q R K++ ++ + T + VP++ G +IGKGG + E++ LT A +
Sbjct: 552 AQFKAQGRIFGKLKEENIFTGKEEVRLETHIRVPSTAAGRVIGKGGKTVNELQSLTSAEV 611
Query: 404 RILPKENLPKIASEDDEMVQISGDL 428
I+P++ P +++ +V+I G
Sbjct: 612 -IVPRDQTPD--EKNEVVVKICGHF 633
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 26/178 (14%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSASDET 99
E V P + +G++IG+ G+ +KQL + I+I P + ER+V +
Sbjct: 494 EQEVAYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAEKPDATERMVIITGTP--- 550
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV--TAKLLVPSDQIGCVIGK 157
+A FK R+ +L+ + G +V + VPS G VIGK
Sbjct: 551 --------------EAQFKAQGRIFG-KLKEENIFTGKEEVRLETHIRVPSTAAGRVIGK 595
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGE--ASVVKKALCQIASRLH 213
GG+ V ++S T A++ + +D+ + +++ +V+I G AS V+K + R H
Sbjct: 596 GGKTVNELQSLTSAEVIVPRDQ---TPDEKNEVVVKICGHFFASQVRKKKKNPSLRPH 650
>gi|156102214|ref|XP_001616800.1| RNA-binding protein Nova-1 [Plasmodium vivax Sal-1]
gi|148805674|gb|EDL47073.1| RNA-binding protein Nova-1, putative [Plasmodium vivax]
Length = 335
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 130/280 (46%), Gaps = 40/280 (14%)
Query: 55 GSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAFEDGDKFVSP 111
GS+IG+ G I+ + T +++ T P ++ERV+ + ++ N
Sbjct: 30 GSVIGKNGSIITSIENKTGCSLKLSPTNSYFPNTQERVLVLCGKQEQIN----------- 78
Query: 112 AQDALFKVHDRV---IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSE 168
+AL + D++ + + ++ + + T +++VP + +IGKGGQ ++ ++
Sbjct: 79 --NALLIILDKIRQITTQNFQDKQNMNTSPKYTCRIVVPKSAVSAIIGKGGQQIKQLQDT 136
Query: 169 TGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAIS 228
TGA+I+I E L ++ ++ I G + ++ + + ++P+ L ++
Sbjct: 137 TGAKIQISSRED----GL-NERIISIIGPFESISDTAIKVTNSIQNDPN-----LKDLLN 186
Query: 229 NSHSSSGSLVGPTAATP-IVGIAPLMG-----PYGGYKGDTAGDWS--RSLYSAPRDDLS 280
+S ++ G ++ + V PL G YG ++ + D + SL RD +
Sbjct: 187 VIYSKDANMNGRSSLSQNFVNQVPLNGYVVPQQYGVFQHEQYMDVNMMNSLMRHSRDLFN 246
Query: 281 SK-EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
E S+++ P IG VIGK GA + I +GA I++
Sbjct: 247 LPCEISIQI--PDEFIGSVIGKNGARLTNIMNSTGAQIRI 284
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 97/229 (42%), Gaps = 53/229 (23%)
Query: 32 DRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVT 91
D+ P+ T R + P + +IIG+GG+ +KQL+ T +KI+I G ER+++
Sbjct: 98 DKQNMNTSPKYTC-RIVVPKSAVSAIIGKGGQQIKQLQDTTGAKIQISSREDGLNERIIS 156
Query: 92 VY----SASDE----TNAFEDG---------------------------------DKFVS 110
+ S SD TN+ ++ + +V
Sbjct: 157 IIGPFESISDTAIKVTNSIQNDPNLKDLLNVIYSKDANMNGRSSLSQNFVNQVPLNGYVV 216
Query: 111 PAQDALFKVHDR-----VIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
P Q +F+ H++ ++ +R D + +P + IG VIGK G + NI
Sbjct: 217 PQQYGVFQ-HEQYMDVNMMNSLMRHSRDL-FNLPCEISIQIPDEFIGSVIGKNGARLTNI 274
Query: 166 RSETGAQIRI-LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
+ TGAQIRI K E +P A D V+I G + V A + RL
Sbjct: 275 MNSTGAQIRISRKGELVPGTA---DRKVRIMGTVAAVHAAHVLLLQRLE 320
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Query: 296 GGVIGKGGAIINQIRQESGAAIKVDSSST----EGDDCLITVSSKEFFEDTLSATIEAVV 351
G VIGK G+II I ++G ++K+ +++ + L+ +E + L ++ +
Sbjct: 30 GSVIGKNGSIITSIENKTGCSLKLSPTNSYFPNTQERVLVLCGKQEQINNALLIILDKIR 89
Query: 352 RLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENL 411
++ + + + + +T R++VP S + +IGKGG I +++ T A I+I +E+
Sbjct: 90 QITTQNFQDKQNMNTSPKYTCRIVVPKSAVSAIIGKGGQQIKQLQDTTGAKIQISSRED- 148
Query: 412 PKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
++ ++ I G + D I+V ++
Sbjct: 149 ----GLNERIISIIGPFESISDTAIKVTNSIQ 176
>gi|324516472|gb|ADY46541.1| Poly(rC)-binding protein 3 [Ascaris suum]
Length = 360
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 22/178 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ G+ +K +R + +KI I + GS ER+VT+ D N
Sbjct: 26 RLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISD---GSCPERIVTITGNVDTINK--- 79
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
F + E+++ +S +T +L+VP+ Q G +IGKGG ++
Sbjct: 80 -----------AFSMICNKFQEDMQALPNSVPKPPITMRLIVPATQCGSLIGKGGSKIKE 128
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
IR TGA I++ E LPS R+ V ISG A + + I L + P + L
Sbjct: 129 IREATGASIQV-ASEMLPSSTERA---VTISGSADAIVLCMQHICHILLEAPPKGTTL 182
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G I IR SGA I + S + ++T++ DT+
Sbjct: 23 LTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISDGSCP--ERIVTITGNV---DTI 77
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
+ + + + T RL+VP ++ G LIGKGGS I E+R T A+I
Sbjct: 78 NKAFSMICNKFQEDMQALPNSVPKPPITMRLIVPATQCGSLIGKGGSKIKEIREATGASI 137
Query: 404 RILPKENLPKIASEDDEMVQISGDLD 429
++ E LP S + V ISG D
Sbjct: 138 QVA-SEMLP---SSTERAVTISGSAD 159
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 77/190 (40%), Gaps = 67/190 (35%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G +++IR +GA+I I SC R +V I+G
Sbjct: 23 LTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISDG----SCPER---IVTITGNVD 75
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I ++ ++ A+ NS
Sbjct: 76 TINKAFSMICNKFQED--------MQALPNS----------------------------- 98
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+ ++RL+ P G +IGKGG+ I +IR+ +GA+I+V
Sbjct: 99 -------------------VPKPPITMRLIVPATQCGSLIGKGGSKIKEIREATGASIQV 139
Query: 320 DS----SSTE 325
S SSTE
Sbjct: 140 ASEMLPSSTE 149
>gi|242024312|ref|XP_002432572.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
gi|212518032|gb|EEB19834.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
Length = 365
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 42/200 (21%)
Query: 22 GPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET 81
GP KR Y D ++ R L P + GSIIG+GG + +LR + + + + +
Sbjct: 12 GPQKR-YKNSDGNEI---------RLLIPSKVAGSIIGKGGHNISKLRTEHNASVTVPD- 60
Query: 82 VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVT 141
PG E R++TV + D D + RV++E L ED +
Sbjct: 61 CPGPE-RILTVAA---------DLDTML------------RVVSEILPNLEDV-----ID 93
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVV 201
++LV Q GC+IGKGG ++ +R +TGA+I+I + C +D +VQI+G+ ++
Sbjct: 94 IRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSN----CCPQSTDRIVQINGKGNLC 149
Query: 202 KKALCQIASRLHDNPSRSQH 221
A+ + L +P + +
Sbjct: 150 VDAIRECMELLKTSPIKGMN 169
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 21/159 (13%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
+RL+ P G +IGKGG I+++R E A++ V G + ++TV++ L
Sbjct: 25 IRLLIPSKVAGSIIGKGGHNISKLRTEHNASVTV--PDCPGPERILTVAAD------LDT 76
Query: 346 TIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+ V + P + I+ R+LV S+ GC+IGKGG I E+R T A I+I
Sbjct: 77 MLRVVSEILPNLEDVID---------IRMLVHQSQAGCIIGKGGLKIKELREKTGARIKI 127
Query: 406 LPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRA 444
D +VQI+G +L DA+ + M L+
Sbjct: 128 YSN----CCPQSTDRIVQINGKGNLCVDAIRECMELLKT 162
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
GG + + ++ +P D G +IGKGG ++ IR E+GA I I DE LP +D ++ IS
Sbjct: 287 GGEKNSTQVTIPKDLAGAIIGKGGSRIRKIRMESGAAITI--DEPLPGS---NDRIITIS 341
Query: 196 GEASVVKKALCQIASRL 212
G + ++ A + RL
Sbjct: 342 GTPNQIQMAQYLLQQRL 358
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
L ++ S ++ P G +IGKGG+ I +IR ESGAAI +D +D +IT+S
Sbjct: 286 LGGEKNSTQVTIPKDLAGAIIGKGGSRIRKIRMESGAAITIDEPLPGSNDRIITIS 341
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 37/61 (60%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+G E + P G+IIG+GG ++++R+++ + I I E +PGS +R++T+ +
Sbjct: 286 LGGEKNSTQVTIPKDLAGAIIGKGGSRIRKIRMESGAAITIDEPLPGSNDRIITISGTPN 345
Query: 98 E 98
+
Sbjct: 346 Q 346
>gi|291409713|ref|XP_002721143.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
Length = 340
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 139/319 (43%), Gaps = 52/319 (16%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKHICVVMLESPPKGVT 175
Query: 212 --LHDNPSRSQHLLA-------SAISNSHSSSGSLVGPTA-ATPIVGIA------PLMGP 255
PS S + A + +++ G P T + +A P+
Sbjct: 176 IPYRPKPSSSPVIFAGGQDRYSTGSDKAYTIQGQYAIPQPDLTKLHQLAVQQSHFPMTHG 235
Query: 256 YGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGA 315
G+ G + Y A D S++ S L P IG +IG GA IN+I Q SGA
Sbjct: 236 NTGFSGIESSSPEVKGYWAGLDA-SAQTTSHELTIPNDLIGCIIGCQGAKINEICQMSGA 294
Query: 316 AIKVDSSSTEGDDCLITVS 334
IK+ ++ D +T++
Sbjct: 295 LIKIANTVEGSTDRQVTIT 313
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
DGG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + + P + ++
Sbjct: 7 DGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERII 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS ++S LV
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNSTAASRPLV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LRLV P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|121710626|ref|XP_001272929.1| KH domain RNA-binding protein [Aspergillus clavatus NRRL 1]
gi|119401079|gb|EAW11503.1| KH domain RNA-binding protein [Aspergillus clavatus NRRL 1]
Length = 362
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 133/289 (46%), Gaps = 34/289 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + ++ G IIG+ G+ V LR +T K + + VPG +RV+TV T +
Sbjct: 47 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTV------TGPLQGT 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ + L + ++ + G +++G H V +LL+ +Q+G +IG+ G +++I
Sbjct: 101 ARAYALVAKGLLEGAPQM---GMGGIVNNNGTHPV--RLLISHNQMGTIIGRQGLKIKHI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH--LL 223
+ +G ++ + + E LP R +V++ G ++KA+ +I L D+ R L
Sbjct: 156 QDASGVRM-VAQKEMLPQSTER---IVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILY 211
Query: 224 ASAISNSHSSSGSLVGPTAATPIVGIAPLM----------GPYGGYKGDTAGDWSRSLYS 273
A+ S + S+ T A+ P G GY + D S Y
Sbjct: 212 NPAVRASVGTGSSINTNTTASNGYNSRPYNRTGNGADFSDGQSAGYSRRSNPDTSNRGYP 271
Query: 274 APRDD---LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+D + ++ S+ P +G +IG+GG+ I +IR+ SGA I +
Sbjct: 272 LVTEDGEEIQTQNISI----PADMVGCIIGRGGSKITEIRRSSGARISI 316
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
DG T + +P+D +GC+IG+GG + IR +GA+I I K H + + + I
Sbjct: 276 DGEEIQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKAPHDET----GERMFTI 331
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHL 222
G A +KAL + L +R L
Sbjct: 332 MGSAQANEKALYLLYENLEAEKTRRSQL 359
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
T + +P +GC+IG+GGS ITE+RR + A I I
Sbjct: 282 TQNISIPADMVGCIIGRGGSKITEIRRSSGARISI 316
>gi|451172115|ref|NP_001094011.1| RNA-binding protein Nova-1 [Rattus norvegicus]
Length = 482
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
+ G KR TG+D F+ + L P GSIIG+GG+ + QL+ +T + I++
Sbjct: 34 EAGSTKRTNTGEDGQYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 85
Query: 80 ET---VPGSEERVVTVYSASDETNAFED--GDKFVSPAQDALFKVHDRVIAEELRGDEDS 134
++ PG+ ERV + + NA +K Q+ ++ + + D
Sbjct: 86 KSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDR 145
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
QV K++VP+ G +IGKGG V+ I ++GA +++ P + +V +
Sbjct: 146 I--KQV--KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL---SQKPDGINLQERVVTV 198
Query: 195 SGEASVVKKALCQIASRLHDNP 216
SGE +KA+ I ++ ++P
Sbjct: 199 SGEPEQNRKAVELIIQKIQEDP 220
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 41/186 (22%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
++ L+++ P G +IGKGG I Q+++E+GA IK+ SK+F+ T
Sbjct: 48 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS-------------KSKDFYPGT 94
Query: 343 ------LSATIEAV----------VRLQPRCSEKIERDSGLISFTT---------RLLVP 377
+ TIEA+ +R P+ K E S L TT +++VP
Sbjct: 95 TERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVP 154
Query: 378 TSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQ 437
S G +IGKGG+ + + + A +++ K P + + +V +SG+ + + A+
Sbjct: 155 NSTAGLIIGKGGATVKAIMEQSGAWVQLSQK---PDGINLQERVVTVSGEPEQNRKAVEL 211
Query: 438 VMTRLR 443
++ +++
Sbjct: 212 IIQKIQ 217
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + F + A + G E S G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 369 ATNGYFGAASPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 428
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I R+
Sbjct: 429 RIQISKKGEFVPGTRNRK---VTITGTPAATQAAQYLITQRI 467
>gi|291409711|ref|XP_002721142.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
Length = 362
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 139/341 (40%), Gaps = 74/341 (21%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKHICVVMLESPPKGVT 175
Query: 212 --LHDNPSRSQHLLAS----------AISNSHSSSGSLVGPTAATPIVGIAPLMGPYG-- 257
PS S + A + S H++ + P P + + G Y
Sbjct: 176 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP 235
Query: 258 ------------------------GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVA 293
G+ G + Y A D S++ S L P
Sbjct: 236 QPDLTKLHQLAVQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDA-SAQTTSHELTIPND 294
Query: 294 NIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
IG +IG GA IN+I Q SGA IK+ ++ D +T++
Sbjct: 295 LIGCIIGCQGAKINEICQMSGALIKIANTVEGSTDRQVTIT 335
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
DGG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 DGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS ++S LV
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNSTAASRPLV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LRLV P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|33516919|sp|Q80WA4.1|NOVA1_RAT RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1
gi|30230625|gb|AAP20872.1| neuro-oncological ventral antigen 1-like protein [Rattus
norvegicus]
Length = 474
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
+ G KR TG+D F+ + L P GSIIG+GG+ + QL+ +T + I++
Sbjct: 34 EAGSTKRTNTGEDGQYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 85
Query: 80 ET---VPGSEERVVTVYSASDETNAFED--GDKFVSPAQDALFKVHDRVIAEELRGDEDS 134
++ PG+ ERV + + NA +K Q+ ++ + + D
Sbjct: 86 KSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDR 145
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
QV K++VP+ G +IGKGG V+ I ++GA +++ P + +V +
Sbjct: 146 I--KQV--KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL---SQKPDGINLQERVVTV 198
Query: 195 SGEASVVKKALCQIASRLHDNP 216
SGE +KA+ I ++ ++P
Sbjct: 199 SGEPEQNRKAVELIIQKIQEDP 220
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 41/186 (22%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
++ L+++ P G +IGKGG I Q+++E+GA IK+ SK+F+ T
Sbjct: 48 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS-------------KSKDFYPGT 94
Query: 343 ------LSATIEAV----------VRLQPRCSEKIERDSGLISFTT---------RLLVP 377
+ TIEA+ +R P+ K E S L TT +++VP
Sbjct: 95 TERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVP 154
Query: 378 TSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQ 437
S G +IGKGG+ + + + A +++ K P + + +V +SG+ + + A+
Sbjct: 155 NSTAGLIIGKGGATVKAIMEQSGAWVQLSQK---PDGINLQERVVTVSGEPEQNRKAVEL 211
Query: 438 VMTRLR 443
++ +++
Sbjct: 212 IIQKIQ 217
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + F + A + G E S G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 369 ATNGYFGAASPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 428
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I R+
Sbjct: 429 RIQISKKGEFVPGTRNRK---VTITGTPAATQAAQYLITQRI 467
>gi|326935820|ref|XP_003213964.1| PREDICTED: poly(rC)-binding protein 4-like, partial [Meleagris
gallopavo]
Length = 232
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 30/195 (15%)
Query: 27 RYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS- 85
R +G Q I R L ++IGSIIG+ GE VK++R + ++I I E GS
Sbjct: 6 RASGPREPQLSI---TLTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISE---GSC 59
Query: 86 EERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVI--AEELRGDEDSDGGHQVTAK 143
ER+ T+ ++D A+F+ + EE GD + G VT +
Sbjct: 60 PERITTITGSTD-----------------AVFRAVSMIAFKLEEDLGDGTAAGRTPVTLR 102
Query: 144 LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKK 203
L++P+ Q G +IGK G ++ IR +GAQ+++ D LP+ R+ V +SG + +
Sbjct: 103 LVIPASQCGSLIGKAGTKIREIRESSGAQVQVAGD-LLPNSTERA---VTVSGVPDTIIQ 158
Query: 204 ALCQIASRLHDNPSR 218
+ QI + + ++P +
Sbjct: 159 CVRQICAVILESPPK 173
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 94/194 (48%), Gaps = 28/194 (14%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
S PR+ S +LR++ IG +IGK G + +IR++S A I + S C
Sbjct: 8 SGPREPQLSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGS-----CPER 62
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERD------SGLISFTTRLLVPTSRIGCLIG 386
++ T++ + +AV R + K+E D +G T RL++P S+ G LIG
Sbjct: 63 IT-------TITGSTDAVFRAVSMIAFKLEEDLGDGTAAGRTPVTLRLVIPASQCGSLIG 115
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
K G+ I E+R + A +++ + LP + + V +SG D +IQ + ++ A +
Sbjct: 116 KAGTKIREIRESSGAQVQVA-GDLLP---NSTERAVTVSG----VPDTIIQCVRQICAVI 167
Query: 447 FDR--EGAVSTFVP 458
+ +GA + P
Sbjct: 168 LESPPKGATIPYHP 181
>gi|218184511|gb|EEC66938.1| hypothetical protein OsI_33565 [Oryza sativa Indica Group]
Length = 800
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 44/215 (20%)
Query: 30 GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERV 89
G++RD P +V+R L P K+G++IG GE +++L +TK+ +R+ + ER
Sbjct: 229 GENRDPG--WPGTSVFRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERA 286
Query: 90 VTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSD 149
V ++ A E D+ PA DAL +V++ I ++ D + V A++L PS+
Sbjct: 287 VIIF-------AKEQPDEPKPPAIDALLRVYECTINDD---GLDVRYNNIVVARILTPSE 336
Query: 150 QIGCVIGKGGQIVQNIRSETGAQIRIL--------------------------------K 177
Q +IG G ++ I+ + I ++
Sbjct: 337 QAASLIGDQGSVINYIKKASKTNIHVIGNFLTLMHLLEPLVPSIDKFDISGLQLSIYTDA 396
Query: 178 DEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
D LP AL D +++I G + V +AL +A L
Sbjct: 397 DGDLPPVALEDDMIIEIWGLPARVHQALELVACHL 431
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 88/212 (41%), Gaps = 46/212 (21%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
R++ P +G VIG G + ++ +E+ A ++V + + + +KE ++
Sbjct: 242 FRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERAVIIFAKEQPDEPKPP 301
Query: 346 TIEAVVRLQPRCSEKIERDSGL-ISFTT----RLLVPTSRIGCLIGKGGSIITEMRRLTK 400
I+A++R+ E D GL + + R+L P+ + LIG GS+I +++ +K
Sbjct: 302 AIDALLRVY----ECTINDDGLDVRYNNIVVARILTPSEQAASLIGDQGSVINYIKKASK 357
Query: 401 ANIRIL--------------------------------PKENLPKIASEDDEMVQISGDL 428
NI ++ +LP +A EDD +++I G
Sbjct: 358 TNIHVIGNFLTLMHLLEPLVPSIDKFDISGLQLSIYTDADGDLPPVALEDDMIIEIWGLP 417
Query: 429 DLAKDALIQVMTRLRANLFDREGAVSTFVPVF 460
AL V LR L R + +P+F
Sbjct: 418 ARVHQALELVACHLRKYLVHR-----SVIPLF 444
>gi|85838458|gb|ABC86135.1| nova [Paracentrotus lividus]
Length = 553
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 96/190 (50%), Gaps = 17/190 (8%)
Query: 33 RDQFIIGPED---TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSE 86
R GP D + + L P GSIIG+GG+ + QL+ DT + +++ + PG++
Sbjct: 61 RTNLGPGPVDDNKYILKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYPGTQ 120
Query: 87 ERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
ERV + + N FV ++ + AE + E + QV K++V
Sbjct: 121 ERVALLTGPVESLNNVA---VFVLEKIKESPQLGVKAGAETITSPERA---RQV--KIVV 172
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALC 206
P+ G +IGKGG ++++I ++G++++I + S+ ++ ISGE +KA+
Sbjct: 173 PNSTAGLIIGKGGAMIKSIMEQSGSRVQISQKSD---GITLSERVITISGEPENNRKAMS 229
Query: 207 QIASRLHDNP 216
I +++ ++P
Sbjct: 230 FIVNKIQEDP 239
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 94/193 (48%), Gaps = 38/193 (19%)
Query: 270 SLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDC 329
+L P DD ++ L+++ P G +IGKGG I Q+++++G +K+ ++
Sbjct: 63 NLGPGPVDD---NKYILKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKAN------ 113
Query: 330 LITVSSKEFFEDT------LSATIEAVVRLQPRCSEKIERD------SGLISFTT----- 372
+F+ T L+ +E++ + EKI+ +G + T+
Sbjct: 114 -------DFYPGTQERVALLTGPVESLNNVAVFVLEKIKESPQLGVKAGAETITSPERAR 166
Query: 373 --RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
+++VP S G +IGKGG++I + + + ++I K + ++ + ++ ISG+ +
Sbjct: 167 QVKIVVPNSTAGLIIGKGGAMIKSIMEQSGSRVQISQKSDGITLS---ERVITISGEPEN 223
Query: 431 AKDALIQVMTRLR 443
+ A+ ++ +++
Sbjct: 224 NRKAMSFIVNKIQ 236
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 376 VPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDAL 435
VP + +G ++GKGG + E + LT A I+I K + + V I+G + A++A
Sbjct: 476 VPETLVGAILGKGGKTLVEFQNLTGAKIQISKKNEY--VPGTRNRRVTITGPVTAAQNAH 533
Query: 436 IQVMTRL 442
+M RL
Sbjct: 534 FLIMQRL 540
>gi|366993026|ref|XP_003676278.1| hypothetical protein NCAS_0D03360 [Naumovozyma castellii CBS 4309]
gi|342302144|emb|CCC69917.1| hypothetical protein NCAS_0D03360 [Naumovozyma castellii CBS 4309]
Length = 445
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 142/336 (42%), Gaps = 61/336 (18%)
Query: 40 PEDTVY-RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
PED V+ R LC +++ ++G GE + +++ DT ++I + E + G ER++ V A D
Sbjct: 71 PEDNVHLRMLCSVKEASLVVGPKGESISKIKKDTSTRINVSENIRGVPERIIYVRGACDN 130
Query: 99 T-NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
NA+ + K + + +F+ + + G + VT LL+ IG +IGK
Sbjct: 131 VANAYLNIAKAIRKNEGIIFQGPEEDEKDREEGSQSKSSDELVTIHLLISHHLIGYIIGK 190
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HD 214
G ++ I + ++ D+ S +D ++ I+G ++KA I + H+
Sbjct: 191 HGSRLKEIEQTSSCKLYASPDQLFSS----NDRILTITGFPDAIQKATRCIGQTILDCHE 246
Query: 215 NPSRSQHLL------ASAISNSHSSSGS---------------------------LVGPT 241
+ S+ + + SA+SNS S G ++ PT
Sbjct: 247 STSKKRAIFYQPSIGYSALSNSSSYYGYNNQSQRFYQFNKYNSYRSRRAPRSPPVMMIPT 306
Query: 242 AATPI-VGIAPLMGPYGGYKGDTAGDWS--------------RSLYSAPRDDLSSKEFSL 286
PI V L P Y +T + + ++ S ++ S+ S+
Sbjct: 307 PVQPIQVTNQTLKQPV--YTAETVANATSFTPNFVLPNVRIVNTIISQSGNNQDSQLMSV 364
Query: 287 RLVCPVAN--IGGVIGKGGAIINQIRQESGAAIKVD 320
+ + +G +IG+ G IN I++ +G +I +D
Sbjct: 365 QREIYINEEFVGNIIGREGRNINSIKETTGCSIFID 400
>gi|359486525|ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
Length = 309
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 126/285 (44%), Gaps = 54/285 (18%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSASD 97
+ T R+L GS+IG+GG + + + ++I++ E PG+ +R++ + A++
Sbjct: 32 KSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISGATN 91
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAE---ELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
E + K + ++A+ E+ ++ + + +L+VP+ G +
Sbjct: 92 E-----------------IIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGI 134
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
IGKGG +++ ++ A I+I ++ + +D LV + G +A+ I S+L +
Sbjct: 135 IGKGGSTIKSFIEDSQASIKISPQDN--NYLGLTDRLVTLMGSLEEQMRAIDLILSKLTE 192
Query: 215 NPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
+P +Q + A S + + + GP A GG + D S S+
Sbjct: 193 DPHYTQFMNA-PFSYAAAYNSMNYGPNGA-------------GGKFQNNKEDRSNSVTIG 238
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D+ +IG V+G+GG I I Q SGA IK+
Sbjct: 239 VADE---------------HIGLVVGRGGRNIMDISQASGARIKI 268
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
+P D K +R + A G VIGKGG+ IN + +SGA I++
Sbjct: 24 SPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLS------------- 70
Query: 334 SSKEFFEDT------LSATIEAVVRLQPRCSEKI-------ERDSGLISFTTRLLVPTSR 380
+ EFF T +S +++ K+ + D RL+VP S
Sbjct: 71 RNHEFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSS 130
Query: 381 IGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMT 440
G +IGKGGS I ++A+I+I P++N D +V + G L+ A+ +++
Sbjct: 131 CGGIIGKGGSTIKSFIEDSQASIKISPQDN--NYLGLTDRLVTLMGSLEEQMRAIDLILS 188
Query: 441 RL 442
+L
Sbjct: 189 KL 190
>gi|255583738|ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
gi|223527642|gb|EEF29753.1| Far upstream element-binding protein, putative [Ricinus communis]
Length = 314
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 127/284 (44%), Gaps = 56/284 (19%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSASDET 99
T R+L GS+IG+GG + + + ++I++ E PG+ +R++
Sbjct: 36 TYVRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDRII--------- 86
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAE---ELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
+S D + K + V+A+ EL ++ D + +L+VP+ G +IG
Sbjct: 87 --------LISGILDDVLKGVELVLAKLLSELHTEDGDDVDPRTKVRLVVPNSSCGSIIG 138
Query: 157 KGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
KGG I+++ E+ A I+I +D + +D LV ++G +A+ I S+L+D+
Sbjct: 139 KGGSIIKSFIEESQAGIKISPQDNNFYGL---NDRLVTVTGTLEEQMRAIDLILSKLYDD 195
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
P Q + H+ V + Y + AG +
Sbjct: 196 PHYVQTM--------HAPFSYAVAYNSMN--------------YGANGAGGK----FQNN 229
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
++D ++ S+ + A+IG V+G+GG I +I Q SGA IK+
Sbjct: 230 KEDRTN---SVTIGVADAHIGLVVGRGGRNIMEISQVSGARIKI 270
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 14/163 (8%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE----GDDCLITVSSKEFFED 341
+R + A G VIGKGGA I + +SGA I++ S + E D +I +S +D
Sbjct: 38 VRFLVSNAAAGSVIGKGGATITDFQSQSGARIQL-SRNYEFFPGTSDRIILISG--ILDD 94
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTT--RLLVPTSRIGCLIGKGGSIITEMRRLT 399
L +E V L SE D + T RL+VP S G +IGKGGSII +
Sbjct: 95 VLKG-VELV--LAKLLSELHTEDGDDVDPRTKVRLVVPNSSCGSIIGKGGSIIKSFIEES 151
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
+A I+I P++N +D +V ++G L+ A+ ++++L
Sbjct: 152 QAGIKISPQDN--NFYGLNDRLVTVTGTLEEQMRAIDLILSKL 192
>gi|291234615|ref|XP_002737239.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1-like
[Saccoglossus kowalevskii]
Length = 655
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 181/439 (41%), Gaps = 62/439 (14%)
Query: 21 HGPNKRRYTGDDRDQFIIGPEDTVY-------RYLCPIRKIGSIIGRGGEIVKQLRIDTK 73
+GP R R++ G +Y R L P +G+IIG+ G ++ + TK
Sbjct: 199 YGPRGDRNKMSPRNESASGSRLYLYPSIDLPVRLLVPSSMVGAIIGKKGANIRLITQQTK 258
Query: 74 SKIRIGETVPGSE--ERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGD 131
+K+ I + + E+ + +Y +P Q + ++++ ++ +
Sbjct: 259 AKVDILRSKENASALEKAINIYG---------------TPLQCS--NTVEQIMETMVKEN 301
Query: 132 EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
E ++ ++ KLL + +G +IGKGG + I E+ ++ I + L +
Sbjct: 302 ESANPSIEIPLKLLAHNSLVGRLIGKGGTTLNKIMEESNTKVSISNLQEL--TIYNMERT 359
Query: 192 VQISGEASVVKKALCQIASRLHDN-----PSRSQHL-------LASAISNSHSSSGSLVG 239
+ I G + KA ++ +L D+ S +Q AS S +S G++
Sbjct: 360 ITIKGSLNDECKAEEMVSEKLRDSFRADMASLTQQYNLFPGLNHASVFSGLGNSPGAIFN 419
Query: 240 PTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
V A + GP Y +T L P + L P++ +G +I
Sbjct: 420 VAMHNSAVLYA-IFGP-AAYTVNT-----HHLLQPPSE-------ITYLFIPISAVGAII 465
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSE 359
G G I +I Q+S A ++V+ +E D+ + E A A + +
Sbjct: 466 GVKGQEIREISQKSSAKVRVEPPRSEDDE-----ERAVYIEGYPDAQWIAQWFIYHKILT 520
Query: 360 KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDD 419
+ G + + ++VP + +G +IGK GS I ++ LT A I + PK P +++
Sbjct: 521 DVCSGKGEVRLISEIMVPANMVGRIIGKRGSAIQDLELLTGAEIDV-PKNIKPN--DKNE 577
Query: 420 EMVQISGDLDLAKDALIQV 438
+V+I G ++ A Q+
Sbjct: 578 VVVRIKGHFFASQSAQRQI 596
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 98/207 (47%), Gaps = 29/207 (14%)
Query: 18 YADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIR 77
YA GP YT + ++ P + PI +G+IIG G+ ++++ + +K+R
Sbjct: 429 YAIFGPAA--YTVNT--HHLLQPPSEITYLFIPISAVGAIIGVKGQEIREISQKSSAKVR 484
Query: 78 IGETVPGSE---ERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDS 134
+ P SE ER V + + D A + ++ +++ + G
Sbjct: 485 V--EPPRSEDDEERAVYI-------EGYPDAQWI------AQWFIYHKILTDVCSGK--- 526
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
G ++ ++++VP++ +G +IGK G +Q++ TGA+I + K+ P+ +++ +V+I
Sbjct: 527 -GEVRLISEIMVPANMVGRIIGKRGSAIQDLELLTGAEIDVPKNIK-PND--KNEVVVRI 582
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQH 221
G + A QI L+ + Q+
Sbjct: 583 KGHFFASQSAQRQIRFMLYTAKAMMQY 609
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 19/177 (10%)
Query: 271 LYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG---D 327
LY P DL +RL+ P + +G +IGK GA I I Q++ A + + S +
Sbjct: 220 LYLYPSIDLP-----VRLLVPSSMVGAIIGKKGANIRLITQQTKAKVDILRSKENASALE 274
Query: 328 DCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGK 387
+ + +T+ +E +V+ + IE +LL S +G LIGK
Sbjct: 275 KAINIYGTPLQCSNTVEQIMETMVKENESANPSIE-------IPLKLLAHNSLVGRLIGK 327
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDALIQVMTRLR 443
GG+ + ++ + + I NL ++ + E + I G L+ A V +LR
Sbjct: 328 GGTTLNKIMEESNTKVSI---SNLQELTIYNMERTITIKGSLNDECKAEEMVSEKLR 381
>gi|335299140|ref|XP_003358506.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Sus scrofa]
Length = 360
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 120/286 (41%), Gaps = 71/286 (24%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L +A +N
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN--------------------- 93
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
G+ SR +LRLV P + G +IGK G I +IR
Sbjct: 94 -------------GGNVSR------------PPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QES--GAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ-------PRCSEKI 361
+ GA I S + G L T + T V +LQ P S +
Sbjct: 129 ESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSM 188
Query: 362 ER--DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 189 VPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 234
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 124/292 (42%), Gaps = 66/292 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVFH 74
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 75 AVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 165 IRSET--GAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
IR GA I L + L +++ + G+ V A ++ Q L
Sbjct: 127 IRESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGAVTPAEV----------TKLQQL 176
Query: 223 LASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSK 282
A+ + +P M P G P SS+
Sbjct: 177 SGHAVPFA-------------------SPSMVP--GLD--------------PGTQTSSQ 201
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T++
Sbjct: 202 EF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 249
>gi|56549651|ref|NP_006480.2| RNA-binding protein Nova-1 isoform 2 [Homo sapiens]
gi|119586394|gb|EAW65990.1| neuro-oncological ventral antigen 1, isoform CRA_a [Homo sapiens]
gi|119586396|gb|EAW65992.1| neuro-oncological ventral antigen 1, isoform CRA_a [Homo sapiens]
Length = 483
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
+ G KR TG+D F+ + L P GSIIG+GG+ + QL+ +T + I++
Sbjct: 35 EAGSTKRTNTGEDGQYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 86
Query: 80 ET---VPGSEERVVTVYSASDETNAFED--GDKFVSPAQDALFKVHDRVIAEELRGDEDS 134
++ PG+ ERV + + NA +K Q+ ++ + + D
Sbjct: 87 KSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDR 146
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
QV K++VP+ G +IGKGG V+ + ++GA +++ P + +V +
Sbjct: 147 I--KQV--KIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPDGINLQERVVTV 199
Query: 195 SGEASVVKKALCQIASRLHDNP 216
SGE +KA+ I ++ ++P
Sbjct: 200 SGEPEQNRKAVELIIQKIQEDP 221
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
++ L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI + +
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + I +R P+ K E S L TT +++VP S G +IGKG
Sbjct: 109 L--NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKG 166
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P + + +V +SG+ + + A+ ++ +++
Sbjct: 167 GATVKAVMEQSGAWVQLSQK---PDGINLQERVVTVSGEPEQNRKAVELIIQKIQ 218
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + F + A + G E S G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 370 ATNGYFGAASPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 429
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I R+
Sbjct: 430 RIQISKKGEFVPGTRNRK---VTITGTPAATQAAQYLITQRI 468
>gi|328783034|ref|XP_624673.3| PREDICTED: far upstream element-binding protein 1-like [Apis
mellifera]
Length = 735
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 138/321 (42%), Gaps = 76/321 (23%)
Query: 48 LCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEE-----------------RVV 90
+ P K+G IIG+GGE +KQL+ + +K+ + + P E+ ++V
Sbjct: 203 MIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQLV 262
Query: 91 TVYSASDETNAFEDG----DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
A E F G D+ + + D+ F G +DG ++LV
Sbjct: 263 YELIAEKEMQMFHRGSRGSDRSGNYSNDSNFN----------HGSGTTDG-----VEVLV 307
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVVKKAL 205
P +G VIGKGG +++ I++ETGA+++ + E P D +SG+ +A+
Sbjct: 308 PRAAVGVVIGKGGDMIKKIQAETGARVQFQQGREDGP-----GDRKCIVSGK----HQAV 358
Query: 206 CQIASRLHDNPSRSQHLLASAI--SNSHSSSGSLVGPTAATPIVGIAPLMGP--YGGYKG 261
Q+ R+ Q L+ S + + S+ G+ GP G + P YGG
Sbjct: 359 EQVRQRI-------QELIDSVMRRDDGRSNMGTRSGPRGN----GFSNNRNPNEYGG--- 404
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD- 320
W R P D F++ P + G +IGKGG I QI Q++GA ++D
Sbjct: 405 -----WDRRQ-GGPMQDKIETTFTV----PSSKCGIIIGKGGETIKQINQQTGAHCELDR 454
Query: 321 -SSSTEGDDCLITVSSKEFFE 340
+ S E + I + E E
Sbjct: 455 RNQSNENEKIFIIRGNPEQVE 475
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 166/401 (41%), Gaps = 108/401 (26%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFV 109
P +G IIGRGGE + +L+ +T KI++ + G ERV T+ + + N ++
Sbjct: 115 PDNMVGLIIGRGGEQITRLQSETGCKIQMA-SESGLPERVCTLTGSREAVNRAKE----- 168
Query: 110 SPAQDALFKVHDRVIAEELRGDEDSDGG---HQVTAKLLVPSDQIGCVIGKGGQIVQNIR 166
L V+ R E + S GG H ++++P ++G +IGKGG+ ++ ++
Sbjct: 169 ----LVLSIVNQRSRTEGIGDMSGSSGGMMGHPGFVEIMIPGPKVGLIIGKGGETIKQLQ 224
Query: 167 SETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASA 226
++GA++ ++++ + ++ ++I+G+ V+ A + + + + H
Sbjct: 225 EKSGAKMVVIQE----GPSQEQEKPLRITGDPQKVEYAKQLVYELIAEKEMQMFH----- 275
Query: 227 ISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSL 286
S GS D +G++S + + S +
Sbjct: 276 ----RGSRGS-------------------------DRSGNYSN---DSNFNHGSGTTDGV 303
Query: 287 RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD---DCLITVSSKEFFEDTL 343
++ P A +G VIGKGG +I +I+ E+GA ++ +G C++
Sbjct: 304 EVLVPRAAVGVVIGKGGDMIKKIQAETGARVQFQQGREDGPGDRKCIV------------ 351
Query: 344 SATIEAVVRLQPRCSEKIE----RDSGLISFTTR-------------------------- 373
S +AV +++ R E I+ RD G + TR
Sbjct: 352 SGKHQAVEQVRQRIQELIDSVMRRDDGRSNMGTRSGPRGNGFSNNRNPNEYGGWDRRQGG 411
Query: 374 ---------LLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
VP+S+ G +IGKGG I ++ + T A+ +
Sbjct: 412 PMQDKIETTFTVPSSKCGIIIGKGGETIKQINQQTGAHCEL 452
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/163 (19%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ 354
+G +IG+GG I +++ E+G I++ S S + S+E + + ++V +
Sbjct: 119 VGLIIGRGGEQITRLQSETGCKIQMASESGLPERVCTLTGSREAV-NRAKELVLSIVNQR 177
Query: 355 PRCSEKIERDSGLISFTTR-----LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKE 409
R + +++P ++G +IGKGG I +++ + A + ++ +
Sbjct: 178 SRTEGIGDMSGSSGGMMGHPGFVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQE- 236
Query: 410 NLPKIASEDDEMVQISGD---LDLAKDALIQVMTRLRANLFDR 449
+ E ++ ++I+GD ++ AK + +++ +F R
Sbjct: 237 ---GPSQEQEKPLRITGDPQKVEYAKQLVYELIAEKEMQMFHR 276
>gi|72084060|ref|XP_790705.1| PREDICTED: uncharacterized protein LOC585801 isoform 2
[Strongylocentrotus purpuratus]
Length = 557
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 94/178 (52%), Gaps = 18/178 (10%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETN 100
+ + L P GSIIG+GG+ + QL+ DT + +++ + PG++ERV + + N
Sbjct: 78 MLKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYPGTQERVALLTGPVESLN 137
Query: 101 --AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
A DK Q + + AE + E + QV K++VP+ G +IGKG
Sbjct: 138 NVAVFILDKIKESPQLGV-----KAGAETITSPERA---RQV--KIVVPNSTAGLIIGKG 187
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
G ++++I ++G++++I + S+ ++ ISGE+ +KA+ I +++ ++P
Sbjct: 188 GAMIKSIMEQSGSRVQISQKSD---GITLSERVITISGESDNNRKAMSFIVNKIQEDP 242
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 94/193 (48%), Gaps = 35/193 (18%)
Query: 270 SLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDC 329
+L S P + ++ L+++ P G +IGKGG I Q+++++G +K+ ++
Sbjct: 63 NLGSGPGGPIDDNKYMLKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKAN------ 116
Query: 330 LITVSSKEFFEDT------LSATIEAVVRLQPRCSEKIERD------SGLISFTT----- 372
+F+ T L+ +E++ + +KI+ +G + T+
Sbjct: 117 -------DFYPGTQERVALLTGPVESLNNVAVFILDKIKESPQLGVKAGAETITSPERAR 169
Query: 373 --RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
+++VP S G +IGKGG++I + + + ++I K + ++ + ++ ISG+ D
Sbjct: 170 QVKIVVPNSTAGLIIGKGGAMIKSIMEQSGSRVQISQKSDGITLS---ERVITISGESDN 226
Query: 431 AKDALIQVMTRLR 443
+ A+ ++ +++
Sbjct: 227 NRKAMSFIVNKIQ 239
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 376 VPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDAL 435
VP + +G ++GKGG + E + LT A I+I K + + V I+G + A++A
Sbjct: 480 VPETLVGAILGKGGKTLVEFQNLTGAKIQISKKNEY--VPGTRNRRVTITGPVTAAQNAH 537
Query: 436 IQVMTRL 442
+M RL
Sbjct: 538 FLIMQRL 544
>gi|148222190|ref|NP_001086143.1| neuro-oncological ventral antigen 1 [Xenopus laevis]
gi|49258011|gb|AAH74252.1| MGC84002 protein [Xenopus laevis]
Length = 484
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
+ G KR TG+D F+ + L P GSIIG+GG+ + QL+ +T + I++
Sbjct: 35 EAGSTKRTNTGEDGQFFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 86
Query: 80 ET---VPGSEERVVTVYSASDETNAFED--GDKFVSPAQDALFKVHDRVIAEELRGDEDS 134
++ PG+ ERV + + NA +K Q+ ++ + + D
Sbjct: 87 KSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDR 146
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
QV K++VP+ G +IGKGG V+ + ++GA +++ P + +V +
Sbjct: 147 I--KQV--KIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPDGINLQERVVTV 199
Query: 195 SGEASVVKKALCQIASRLHDNP 216
SGE +KA+ I ++ ++P
Sbjct: 200 SGEPEQNRKAVELIVQKIQEDP 221
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
+F L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI + +
Sbjct: 49 QFFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + I +R P+ K E S L TT +++VP S G +IGKG
Sbjct: 109 L--NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKG 166
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P + + +V +SG+ + + A+ ++ +++
Sbjct: 167 GATVKAVMEQSGAWVQLSQK---PDGINLQERVVTVSGEPEQNRKAVELIVQKIQ 218
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + F + A + G E S G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 371 ATNGYFGAASPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 430
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I R+
Sbjct: 431 RIQISKKGEFVPGTRNRK---VTITGTPAATQAAQYLITQRV 469
>gi|291575150|ref|NP_065151.2| poly(rC)-binding protein 4 isoform a [Homo sapiens]
gi|114587204|ref|XP_001170813.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pan troglodytes]
gi|16877720|gb|AAH17098.1| PCBP4 protein [Homo sapiens]
gi|119585570|gb|EAW65166.1| poly(rC) binding protein 4, isoform CRA_b [Homo sapiens]
Length = 360
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 123/289 (42%), Gaps = 77/289 (26%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L +A +N
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN--------------------- 93
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
G+ SR +LRLV P + G +IGK G I +IR
Sbjct: 94 -------------GGNVSR------------PPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QES--GAAIKVDSSSTEGDDCLITVSSKEFFE---DTLSATIEAVVRLQPRCSEKIE--- 362
+ GA I S + G + +S+ + F + T V +LQ S +
Sbjct: 129 ESPPKGATIPYHPSLSLGT---VLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFAT 185
Query: 363 ------RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 186 PSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 234
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 122/292 (41%), Gaps = 66/292 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVFH 74
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 75 AVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 165 IRSET--GAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
IR GA I L + L +++ + G+ V A ++ Q L
Sbjct: 127 IRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEV----------TKLQQL 176
Query: 223 LASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSK 282
+ A+ ATP V P D ++
Sbjct: 177 SSHAVP-------------FATPSV--------------------------VPGLDPGTQ 197
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
S + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T++
Sbjct: 198 TSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 249
>gi|383858339|ref|XP_003704659.1| PREDICTED: far upstream element-binding protein 1-like [Megachile
rotundata]
Length = 736
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 135/321 (42%), Gaps = 76/321 (23%)
Query: 48 LCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEE-----------------RVV 90
+ P K+G IIG+GGE +KQL+ + +K+ + + P E+ ++V
Sbjct: 203 MIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQLV 262
Query: 91 TVYSASDETNAFEDG----DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
A E F G D+ S + D+ F G +DG ++LV
Sbjct: 263 YELIAEKEMQMFHRGARGNDRSGSYSNDSSFN----------HGSGTTDG-----VEVLV 307
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVVKKAL 205
P +G VIGKGG +++ I++ETGA+++ + E P D +SG+ V+
Sbjct: 308 PRAAVGVVIGKGGDMIKKIQAETGARVQFQQGREDGP-----GDRKCILSGKHQAVE--- 359
Query: 206 CQIASRLHDNPSRSQHLLASAI--SNSHSSSGSLVGPTAATPIVGIAPLMGP--YGGYKG 261
Q+ R+ Q L+ S + + S G+ GP G P YGG
Sbjct: 360 -QVRQRI-------QELIDSVMRRDDGRSPMGTRSGPRGN----GFGNNRNPNEYGG--- 404
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD- 320
W R P D F++ P + G +IGKGG I QI Q++GA ++D
Sbjct: 405 -----WDRRQ-GGPMQDKIETTFTV----PSSKCGIIIGKGGETIKQINQQTGAHCELDR 454
Query: 321 -SSSTEGDDCLITVSSKEFFE 340
+ S E + I + E E
Sbjct: 455 RNQSNENEKIFIIRGNPEQVE 475
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 164/392 (41%), Gaps = 88/392 (22%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFV 109
P + +G IIGRGGE + +L+ +T KI++ G ERV T+ + + N
Sbjct: 113 PDKMVGLIIGRGGEQITRLQSETGCKIQMAPES-GLPERVCTLTGSREAVNR-------- 163
Query: 110 SPAQDALFKVHDRVIAEELRGDEDSDGG------HQVTAKLLVPSDQIGCVIGKGGQIVQ 163
A++ + + ++ E GD + G H ++++P ++G +IGKGG+ ++
Sbjct: 164 --AKELVLSIVNQRSRTEGIGDMNMSGSSGGMMGHPGFVEIMIPGPKVGLIIGKGGETIK 221
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLL 223
++ ++GA++ ++++ + ++ ++I+G+ V+ A + + + Q
Sbjct: 222 QLQEKSGAKMVVIQE----GPSQEQEKPLRITGDPQKVEYAKQLVYELIAE--KEMQMFH 275
Query: 224 ASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKE 283
A N S G Y D++ + S
Sbjct: 276 RGARGNDRS------------------------GSYSNDSS-----------FNHGSGTT 300
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD---DCLITVSSK--EF 338
+ ++ P A +G VIGKGG +I +I+ E+GA ++ +G C+++ + E
Sbjct: 301 DGVEVLVPRAAVGVVIGKGGDMIKKIQAETGARVQFQQGREDGPGDRKCILSGKHQAVEQ 360
Query: 339 FEDTLSATIEAVVR----LQPRCSEKIERDSGLIS---------------------FTTR 373
+ I++V+R P + R +G + T
Sbjct: 361 VRQRIQELIDSVMRRDDGRSPMGTRSGPRGNGFGNNRNPNEYGGWDRRQGGPMQDKIETT 420
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
VP+S+ G +IGKGG I ++ + T A+ +
Sbjct: 421 FTVPSSKCGIIIGKGGETIKQINQQTGAHCEL 452
>gi|70989127|ref|XP_749413.1| KH domain RNA-binding protein [Aspergillus fumigatus Af293]
gi|66847044|gb|EAL87375.1| KH domain RNA-binding protein [Aspergillus fumigatus Af293]
gi|159128828|gb|EDP53942.1| KH domain RNA-binding protein [Aspergillus fumigatus A1163]
Length = 355
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 134/293 (45%), Gaps = 43/293 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + ++ G IIG+ G+ V LR +T K + + VPG +RV+TV T +
Sbjct: 41 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTV------TGPLQGT 94
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ + L + ++ + G +++G H V +LL+ +Q+G +IG+ G +++I
Sbjct: 95 ARAYALVAKGLLEGAPQM---GMGGIVNNNGTHPV--RLLISHNQMGTIIGRQGLKIKHI 149
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH--LL 223
+ +G ++ + + E LP R +V++ G ++KA+ +I L D+ R L
Sbjct: 150 QDASGVRM-VAQKEMLPQSTER---IVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILY 205
Query: 224 ASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY--------------GGYKGDTAGDWSR 269
A+ S S S+ T VG PY GGY + D S
Sbjct: 206 NPAVRASVGGSTSM-----NTSSVGNGYSSRPYNRTGNGADFSDGQSGGYGRRSNPDTSN 260
Query: 270 SLYSAPRDD---LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
Y +D + ++ S+ P +G +IG+GG+ I +IR+ SGA I +
Sbjct: 261 RGYPLVTEDGEEIQTQNISI----PADMVGCIIGRGGSKITEIRRSSGARISI 309
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
DG T + +P+D +GC+IG+GG + IR +GA+I I K H + + + I
Sbjct: 269 DGEEIQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKAPHDET----GERMFTI 324
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHL 222
G A +KAL + L +R L
Sbjct: 325 MGSAQANEKALYLLYENLEAEKTRRSQL 352
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
T + +P +GC+IG+GGS ITE+RR + A I I
Sbjct: 275 TQNISIPADMVGCIIGRGGSKITEIRRSSGARISI 309
>gi|449281891|gb|EMC88850.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 330
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 136/314 (43%), Gaps = 54/314 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ K L +S RI + ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKVRMSFKSLPFSFQSGARINISEGNCPERIVTITGPTD-------- 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGD-------EDSDGGHQVTAKLLVPSDQIGCVIGKG 158
A+FK +IA + D + VT +L+VP+ Q G +IGKG
Sbjct: 69 ---------AIFKAFA-MIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKG 118
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 119 GSKIKEIRESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 174
Query: 219 ------------SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG-------GY 259
+ + A + + ++ P T + +A P+ +
Sbjct: 175 GATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAF 234
Query: 260 KGDT----AGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
G+ + + +++L D S + L P IG +IG+ G IN+IRQ SG
Sbjct: 235 PGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSG 294
Query: 315 AAIKVDSSSTEGDD 328
A IK+ +++TEG
Sbjct: 295 AQIKI-ANATEGSS 307
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T RL+VP S+ G LIGKGGS I E+R T A +++ + LP + + V ISG
Sbjct: 101 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISG---- 152
Query: 431 AKDALIQVMTRLRANLFDR--EGAVSTFVP 458
DA+IQ + ++ + + +GA + P
Sbjct: 153 TPDAIIQCVKQICVVMLESPPKGATIPYRP 182
>gi|426340777|ref|XP_004034304.1| PREDICTED: poly(rC)-binding protein 4 isoform 4 [Gorilla gorilla
gorilla]
Length = 360
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 123/289 (42%), Gaps = 77/289 (26%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L +A +N
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN--------------------- 93
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
G+ SR +LRLV P + G +IGK G I +IR
Sbjct: 94 -------------GGNVSR------------PPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QES--GAAIKVDSSSTEGDDCLITVSSKEFFE---DTLSATIEAVVRLQPRCSEKIE--- 362
+ GA I S + G + +S+ + F + T V +LQ S +
Sbjct: 129 ESPPKGATIPYHPSLSLGT---VLLSANQGFSVQGQYGAVTPTEVTKLQQLSSHAVPFAT 185
Query: 363 ------RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 186 PSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 234
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 121/292 (41%), Gaps = 66/292 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVFH 74
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 75 AVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 165 IRSET--GAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
IR GA I L + L +++ + G+ V ++ Q L
Sbjct: 127 IRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPTEV----------TKLQQL 176
Query: 223 LASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSK 282
+ A+ ATP V P D ++
Sbjct: 177 SSHAVP-------------FATPSV--------------------------VPGLDPGTQ 197
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
S + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T++
Sbjct: 198 TSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 249
>gi|255580721|ref|XP_002531182.1| conserved hypothetical protein [Ricinus communis]
gi|223529223|gb|EEF31197.1| conserved hypothetical protein [Ricinus communis]
Length = 122
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 54/84 (64%), Gaps = 7/84 (8%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D VYR + P+ K+GSIIGR GE++K++ ++T+++IRI + P +R+V +
Sbjct: 24 PRDNVYRLIVPVAKVGSIIGRKGELIKKMCVETRARIRILDGPPSISDRIVLI------- 76
Query: 100 NAFEDGDKFVSPAQDALFKVHDRV 123
+ E+ + +SPA DA+ +V RV
Sbjct: 77 SGKEEPEAALSPAMDAVLRVFKRV 100
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
T G W PRD++ RL+ PVA +G +IG+ G +I ++ E+ A I++
Sbjct: 15 QTEGKWP----GWPRDNV------YRLIVPVAKVGSIIGRKGELIKKMCVETRARIRILD 64
Query: 322 SSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCS 358
D ++ +S KE E LS ++AV+R+ R S
Sbjct: 65 GPPSISDRIVLISGKEEPEAALSPAMDAVLRVFKRVS 101
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 11/76 (14%)
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD----- 427
RL+VP +++G +IG+ G +I +M T+A IRIL + P I+ D +V ISG
Sbjct: 30 RLIVPVAKVGSIIGRKGELIKKMCVETRARIRIL--DGPPSIS---DRIVLISGKEEPEA 84
Query: 428 -LDLAKDALIQVMTRL 442
L A DA+++V R+
Sbjct: 85 ALSPAMDAVLRVFKRV 100
>gi|321475563|gb|EFX86525.1| hypothetical protein DAPPUDRAFT_307836 [Daphnia pulex]
Length = 364
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 95/183 (51%), Gaps = 38/183 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GEIVK+ R ++ ++I I + GS ER+VT+ +D
Sbjct: 21 RLLMAGKEVGSIIGKKGEIVKRFREESGARINISD---GSCPERIVTITGTTD------- 70
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH---------QVTAKLLVPSDQIGCVI 155
A+FK + +I ++L E+ GG +T +L++P+ Q G +I
Sbjct: 71 ----------AIFKAFN-LICKKL---EEEVGGPLAGTAIPRPPITLRLIMPASQCGSLI 116
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG ++ IR TGA + ++ E LP+ R+ V +SG + + + + I + ++
Sbjct: 117 GKGGSKIKEIREITGASV-VVASEMLPNSTERA---VTVSGTSDAITQCIYHICCVMLES 172
Query: 216 PSR 218
P +
Sbjct: 173 PPK 175
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 11/163 (6%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
D S ++RL+ +G +IGK G I+ + R+ESGA I + S IT ++
Sbjct: 12 DAPSVTLTIRLLMAGKEVGSIIGKKGEIVKRFREESGARINISDGSCPERIVTITGTTDA 71
Query: 338 FFE--DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
F+ + + +E V P I R T RL++P S+ G LIGKGGS I E+
Sbjct: 72 IFKAFNLICKKLEEEVG-GPLAGTAIPRPP----ITLRLIMPASQCGSLIGKGGSKIKEI 126
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
R +T A++ ++ E LP + + V +SG D + +
Sbjct: 127 REITGASV-VVASEMLP---NSTERAVTVSGTSDAITQCIYHI 165
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 61/182 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+IV+ R E+GA+I I D P + +V I+G
Sbjct: 18 LTIRLLMAGKEVGSIIGKKGEIVKRFREESGARINI-SDGSCP------ERIVTITGTTD 70
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L + + GP A T I
Sbjct: 71 AIFKAFNLICKKLEEE---------------------VGGPLAGTAI------------- 96
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
PR + +LRL+ P + G +IGKGG+ I +IR+ +GA++ V
Sbjct: 97 ---------------PRPPI-----TLRLIMPASQCGSLIGKGGSKIKEIREITGASVVV 136
Query: 320 DS 321
S
Sbjct: 137 AS 138
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
G Q + ++ VP++ IGC+IGKGG + IR +GA IRI E S S+ + I
Sbjct: 264 SGAPQQSQEMAVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEDRES---SSERTITI 320
Query: 195 SGEASVVKKALCQIASRL 212
+G A V A I +RL
Sbjct: 321 TGTAESVALAQYLINTRL 338
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 364 DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQ 423
SG + + VP IGC+IGKGG+ I E+R+++ A IRI N S + +
Sbjct: 263 QSGAPQQSQEMAVPNELIGCIIGKGGTKIAEIRQISGAMIRI---SNCEDRESSSERTIT 319
Query: 424 ISGDLDLAKDALIQVMTRL 442
I+G + A + TRL
Sbjct: 320 ITGTAESVALAQYLINTRL 338
>gi|291405848|ref|XP_002719162.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein
1-like, partial [Oryctolagus cuniculus]
Length = 570
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++++S + +
Sbjct: 188 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPEGCS 247
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 248 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 290
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 291 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE---A 343
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 344 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 399
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 400 V------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 448
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 449 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 504
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 505 ELQNLTAAEV-VVPRDQTP---DENDQVI 529
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE V + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 392 FMQAPEQEVVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 451
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 452 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 488
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 489 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 520
>gi|328781397|ref|XP_392536.4| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Apis
mellifera]
Length = 482
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 35/194 (18%)
Query: 23 PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
P+KR GDD R L P + GSIIG+GG+ + +LR K+ I + +
Sbjct: 73 PHKRYRQGDDE-----------LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPD-C 120
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
PG E RV+T+ S + +V + V+ L + G ++
Sbjct: 121 PGPE-RVLTISSD-----------------LPTVLQVLNEVVPN-LEENGSRHGSDEIDV 161
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
++LV Q GC+IGKGG ++ +R +TGA+I+I C +D L+ I G+ +
Sbjct: 162 RMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSH----CCPHSTDRLISICGKPTTCI 217
Query: 203 KALCQIASRLHDNP 216
+ + ++ + + +P
Sbjct: 218 ECIRELIATIKTSP 231
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
++P + LRL+ P G +IGKGG I ++R + A+I V G + ++T
Sbjct: 71 TSPHKRYRQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIV--PDCPGPERVLT 128
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+SS L ++ + + P E R G R+LV S+ GC+IGKGG I
Sbjct: 129 ISSD------LPTVLQVLNEVVPNLEENGSR-HGSDEIDVRMLVHQSQAGCIIGKGGLKI 181
Query: 393 TEMRRLTKANIRI 405
E+R T A I+I
Sbjct: 182 KELREKTGARIKI 194
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
+ T ++ +P D G +IGKGG ++ +RS++GA I I DE L + +D ++ I+G
Sbjct: 407 KTTTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI--DEPL---SGSNDRIITITGLP 461
Query: 199 SVVKKALCQIASRLHDN 215
S ++ A + +H+N
Sbjct: 462 SQIQMAQYLLQQSVHEN 478
>gi|119498177|ref|XP_001265846.1| KH domain RNA-binding protein [Neosartorya fischeri NRRL 181]
gi|119414010|gb|EAW23949.1| KH domain RNA-binding protein [Neosartorya fischeri NRRL 181]
Length = 360
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 134/293 (45%), Gaps = 43/293 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + ++ G IIG+ G+ V LR +T K + + VPG +RV+TV T +
Sbjct: 46 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTV------TGPLQGT 99
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ + L + ++ + G +++G H V +LL+ +Q+G +IG+ G +++I
Sbjct: 100 ARAYALVAKGLLEGAPQM---GMGGIVNNNGTHPV--RLLISHNQMGTIIGRQGLKIKHI 154
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH--LL 223
+ +G ++ + + E LP R +V++ G ++KA+ +I L D+ R L
Sbjct: 155 QDASGVRM-VAQKEMLPQSTER---IVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILY 210
Query: 224 ASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY--------------GGYKGDTAGDWSR 269
A+ S S S+ T VG PY GGY + D S
Sbjct: 211 NPAVRASVGGSTSM-----NTSSVGNGYNSRPYNRTGNGADFSDGQSGGYGRRSNPDTSN 265
Query: 270 SLYSAPRDD---LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
Y +D + ++ S+ P +G +IG+GG+ I +IR+ SGA I +
Sbjct: 266 RGYPLVTEDGEEIQTQNISI----PADMVGCIIGRGGSKITEIRRSSGARISI 314
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
DG T + +P+D +GC+IG+GG + IR +GA+I I K H + + + I
Sbjct: 274 DGEEIQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKAPHDET----GERMFTI 329
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHL 222
G A +KAL + L +R L
Sbjct: 330 MGSAQANEKALYLLYENLEAEKTRRSQL 357
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
T + +P +GC+IG+GGS ITE+RR + A I I
Sbjct: 280 TQNISIPADMVGCIIGRGGSKITEIRRSSGARISI 314
>gi|350412234|ref|XP_003489579.1| PREDICTED: far upstream element-binding protein 1-like [Bombus
impatiens]
Length = 736
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 161/389 (41%), Gaps = 83/389 (21%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFV 109
P +G IIGRGGE + +L+ +T KI++ G ER+ T+ + + N ++
Sbjct: 115 PDNMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLPERLCTLTGSREAVNRAKE----- 169
Query: 110 SPAQDALFKVHDRVIAEELRGDEDSDGG---HQVTAKLLVPSDQIGCVIGKGGQIVQNIR 166
L V+ R E + S GG H ++++P ++G +IGKGG+ ++ ++
Sbjct: 170 ----LVLSIVNQRSRTEGIGDMGGSSGGIMSHSGFVEIMIPGPKVGLIIGKGGETIKQLQ 225
Query: 167 SETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASA 226
++GA++ ++++ + ++ ++I+G+ V+ A + + + Q A
Sbjct: 226 EKSGAKMVVIQE----GPSQEQEKPLRITGDPQKVEYAKQLVYELIAE--KEMQMFHRGA 279
Query: 227 ISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSL 286
N S G+ + D S + S D +
Sbjct: 280 RGNDRS----------------------------GNYSNDSSFNHGSGTTD-------GV 304
Query: 287 RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD---DCLITVSSK--EFFED 341
++ P A +G VIGKGG +I +I+ E+GA ++ +G C+++ + E
Sbjct: 305 EVLVPRAAVGVVIGKGGDMIKKIQAETGARVQFQQGREDGPGDRKCIVSGKHQAVEQVRQ 364
Query: 342 TLSATIEAVVR----------------------LQPRCSEKIERDSG---LISFTTRLLV 376
+ I++V+R P +R G T V
Sbjct: 365 RIQELIDSVMRRDDGRSNIGARSGPRGNGFGNNRNPNEYGGWDRRQGGPMQDKIETMFTV 424
Query: 377 PTSRIGCLIGKGGSIITEMRRLTKANIRI 405
P+S+ G +IGKGG I ++ + T A+ +
Sbjct: 425 PSSKCGIIIGKGGETIKQINQQTGAHCEL 453
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 131/306 (42%), Gaps = 46/306 (15%)
Query: 48 LCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDK 107
+ P K+G IIG+GGE +KQL+ + +K+ + + P E+ + + +
Sbjct: 204 MIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQLV 263
Query: 108 FVSPAQDALFKVHDRVIAEELRGDEDSDG------GHQVTAKLLVPSDQIGCVIGKGGQI 161
+ A+ + H + G+ +D G ++LVP +G VIGKGG +
Sbjct: 264 YELIAEKEMQMFHRGARGNDRSGNYSNDSSFNHGSGTTDGVEVLVPRAAVGVVIGKGGDM 323
Query: 162 VQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
++ I++ETGA+++ + E P D +SG+ V+ Q+ R+ Q
Sbjct: 324 IKKIQAETGARVQFQQGREDGP-----GDRKCIVSGKHQAVE----QVRQRI-------Q 367
Query: 221 HLLASAI--SNSHSSSGSLVGPTAATPIVGIAPLMGP--YGGYKGDTAGDWSRSLYSAPR 276
L+ S + + S+ G+ GP G P YGG W R +
Sbjct: 368 ELIDSVMRRDDGRSNIGARSGPRGN----GFGNNRNPNEYGG--------WDRRQGGPMQ 415
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD--SSSTEGDDCLITVS 334
D + + P + G +IGKGG I QI Q++GA ++D + S E + I
Sbjct: 416 DKIET-----MFTVPSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQSNENEKIFIIRG 470
Query: 335 SKEFFE 340
+ E E
Sbjct: 471 NPEQVE 476
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 115/280 (41%), Gaps = 72/280 (25%)
Query: 144 LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKK 203
+ VP + +G +IG+GG+ + ++SETG +I++ P + L ++G V
Sbjct: 112 IRVPDNMVGLIIGRGGEQITRLQSETGCKIQMA-----PESGGLPERLCTLTGSREAV-- 164
Query: 204 ALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDT 263
+R++ L+ S ++ + G +G GG G
Sbjct: 165 -------------NRAKELVLSIVNQRSRTEG-----------------IGDMGGSSGGI 194
Query: 264 AGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV--DS 321
+S F + ++ P +G +IGKGG I Q++++SGA + V +
Sbjct: 195 ---------------MSHSGF-VEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEG 238
Query: 322 SSTE--------GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFT-- 371
S E GD + + + +E ++ R R +++ S SF
Sbjct: 239 PSQEQEKPLRITGDPQKVEYAKQLVYELIAEKEMQMFHRG-ARGNDRSGNYSNDSSFNHG 297
Query: 372 ------TRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+LVP + +G +IGKGG +I +++ T A ++
Sbjct: 298 SGTTDGVEVLVPRAAVGVVIGKGGDMIKKIQAETGARVQF 337
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 84/186 (45%), Gaps = 35/186 (18%)
Query: 291 PVANIGGV---------------IGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
P+ N+GG+ IG+GG I +++ E+G I++ S + L T++
Sbjct: 100 PIGNVGGICNEDIRVPDNMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLPERLCTLTG 159
Query: 336 KEFFEDTLSATIEAVVRLQPRC---------SEKIERDSGLISFTTRLLVPTSRIGCLIG 386
+ + ++V + R S I SG + +++P ++G +IG
Sbjct: 160 SREAVNRAKELVLSIVNQRSRTEGIGDMGGSSGGIMSHSGFV----EIMIPGPKVGLIIG 215
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD---LDLAKDALIQVMTRLR 443
KGG I +++ + A + ++ + + E ++ ++I+GD ++ AK + +++
Sbjct: 216 KGGETIKQLQEKSGAKMVVIQE----GPSQEQEKPLRITGDPQKVEYAKQLVYELIAEKE 271
Query: 444 ANLFDR 449
+F R
Sbjct: 272 MQMFHR 277
>gi|116192195|ref|XP_001221910.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88181728|gb|EAQ89196.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 375
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 132/292 (45%), Gaps = 36/292 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + ++ G IIG+GG+ V LR +T K + + V G +RV+T+ T E
Sbjct: 53 RAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVYDRVLTI------TGGCEAI 106
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ + AL + + + G S+G H + KLL+ +Q+G +IG+ G +++I
Sbjct: 107 SRAYAVVARALLEGAPTI---GMGGVVQSNGTHPI--KLLISHNQMGTIIGRQGLKIKHI 161
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
+ +G ++ + + E LP R +V++ G +++A+ +I L D+ R +
Sbjct: 162 QDVSGVRM-VAQKEMLPQSTER---IVEVQGTPEGIQRAIWEICKCLVDDWQRGAGTVLY 217
Query: 226 AISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR--------- 276
+G+ G T T V PYGG + G+ + PR
Sbjct: 218 NPVVRTQGAGAAPGVTGTTNFV---QDRAPYGGSRVTRTGNGADFSNGGPRPYNRRSDSD 274
Query: 277 --------DDLSSKEFSLRLVC-PVANIGGVIGKGGAIINQIRQESGAAIKV 319
D + +E + + P +G +IG+GG+ I++IR+ SGA I +
Sbjct: 275 AAARGPPTHDENGEEIQTQNISIPADMVGCIIGRGGSKISEIRKTSGARISI 326
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
D +G T + +P+D +GC+IG+GG + IR +GA+I I K H + + +
Sbjct: 284 DENGEEIQTQNISIPADMVGCIIGRGGSKISEIRKTSGARISIAKAPHDET----GERMF 339
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLA 224
I G A ++AL + L R Q A
Sbjct: 340 TIMGSAKANERALFLLYENLEAEKMRRQQQAA 371
>gi|443926268|gb|ELU44971.1| cytoplasmic protein [Rhizoctonia solani AG-1 IA]
Length = 389
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 117/270 (43%), Gaps = 35/270 (12%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIG+ G+ V ++R + +++ + E++PG+ ER++ V D A
Sbjct: 83 IIGKAGKHVNEIREKSGARVMVSESIPGNPERILNVSGPLD--------------AVSKS 128
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT K ++P ++G VIG+GG ++ I+ +GA++
Sbjct: 129 FGLIVRRINDEPFDTPSVPGSRAVTIKFIIPHSRMGSVIGRGGSKIKEIQDASGAKLN-A 187
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
+ LP R ++ +SG A + A + + L+ +A HSSS S
Sbjct: 188 SEGMLPGSTER---ILSVSGVADAIHIATYYVGNI----------LIEAAERQPHSSSTS 234
Query: 237 LVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIG 296
P+ + P P Y G + P +++ + P +G
Sbjct: 235 TYRPSGTS---SRGPRYAPTPTYSGYYGYPPPPAPAPYPPGPPQTQQ----IYIPNDLVG 287
Query: 297 GVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
+IGKGG+ IN+IR S + I++ +G
Sbjct: 288 CIIGKGGSKINEIRSLSASQIRIMEPGVQG 317
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 36/202 (17%)
Query: 37 IIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSA 95
+ G +++ P ++GS+IGRGG +K+++ + +K+ E +PGS ER+++V
Sbjct: 146 VPGSRAVTIKFIIPHSRMGSVIGRGGSKIKEIQDASGAKLNASEGMLPGSTERILSVSGV 205
Query: 96 SDETN--AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV------------- 140
+D + + G+ + A+ + H + S G
Sbjct: 206 ADAIHIATYYVGNILIEAAER---QPHSSSTSTYRPSGTSSRGPRYAPTPTYSGYYGYPP 262
Query: 141 -------------TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD--EHLPSCA 185
T ++ +P+D +GC+IGKGG + IRS + +QIRI++ + P A
Sbjct: 263 PPAPAPYPPGPPQTQQIYIPNDLVGCIIGKGGSKINEIRSLSASQIRIMEPGVQGPPGTA 322
Query: 186 L--RSDELVQISGEASVVKKAL 205
++ LV I+G+ ++ A+
Sbjct: 323 QGNPNERLVIITGQPQNIQMAV 344
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 50/214 (23%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVS----- 334
S+ +++ + P + +G VIG+GG+ I +I+ SGA + G + +++VS
Sbjct: 149 SRAVTIKFIIPHSRMGSVIGRGGSKIKEIQDASGAKLNASEGMLPGSTERILSVSGVADA 208
Query: 335 ---SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISF--------------------- 370
+ + + L IEA R S R SG S
Sbjct: 209 IHIATYYVGNIL---IEAAERQPHSSSTSTYRPSGTSSRGPRYAPTPTYSGYYGYPPPPA 265
Query: 371 ----------TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPK--ENLPKIA--S 416
T ++ +P +GC+IGKGGS I E+R L+ + IRI+ + P A +
Sbjct: 266 PAPYPPGPPQTQQIYIPNDLVGCIIGKGGSKINEIRSLSASQIRIMEPGVQGPPGTAQGN 325
Query: 417 EDDEMVQISG---DLDLAKDALIQVMTRLRANLF 447
++ +V I+G ++ +A + L V R NL
Sbjct: 326 PNERLVIITGQPQNIQMAVNLLYHVSFRDLLNLV 359
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 9/109 (8%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRL---Q 354
+IGK G +N+IR++SGA + V S + ++ VS D +S + +VR +
Sbjct: 83 IIGKAGKHVNEIREKSGARVMVSESIPGNPERILNVSGP---LDAVSKSFGLIVRRINDE 139
Query: 355 PRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
P + + G + T + ++P SR+G +IG+GGS I E++ + A +
Sbjct: 140 PFDTPSVP---GSRAVTIKFIIPHSRMGSVIGRGGSKIKEIQDASGAKL 185
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
D + Q+ + L+ + +IGK G+ V IR ++GA R++ E +P R
Sbjct: 60 DPPAPPAAQIHMRCLIVTQDASIIIGKAGKHVNEIREKSGA--RVMVSESIPGNPER--- 114
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISN-----SHSSSGSLVG 239
++ +SG V K+ I R++D P + + S HS GS++G
Sbjct: 115 ILNVSGPLDAVSKSFGLIVRRINDEPFDTPSVPGSRAVTIKFIIPHSRMGSVIG 168
>gi|260949329|ref|XP_002618961.1| hypothetical protein CLUG_00120 [Clavispora lusitaniae ATCC 42720]
gi|238846533|gb|EEQ35997.1| hypothetical protein CLUG_00120 [Clavispora lusitaniae ATCC 42720]
Length = 488
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 128/339 (37%), Gaps = 95/339 (28%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVY-SASDETNAFED 104
R CP+++ +++G+ GE + +R +I + E + ERV++V SA D A
Sbjct: 117 RMYCPVKEAAAVVGKKGEKITHIREKANVRIYVSENLKNVPERVISVKGSAEDVARA--- 173
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
F + R I EE + S Q KLLVP +G +IGK G +
Sbjct: 174 ------------FGLITRAILEEPEDEPASITSKQYNLKLLVPHPMVGYIIGKSGSKFRE 221
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL------------ 212
I + A+++ ++ LP +D ++ ++G + A+ I S +
Sbjct: 222 IEENSAAKLK-AAEQALP---YSTDRVLSVTGVGDAIHIAVYYICSVMLAHRDCLKKHKI 277
Query: 213 -HDNPS--RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL----MGPYGGYKGDTAG 265
+ NPS R Q A+ I N S+ A P + P+ MGP K D G
Sbjct: 278 IYYNPSNFRPQLPAANPIMNM-----SIAPQQNAVPYMTGNPMQMQQMGPGPNLK-DAHG 331
Query: 266 DWS----------------RSLYSAPRD-------------------------------- 277
+S R ++ P +
Sbjct: 332 SYSQVPKPYNFQMMFQPSARPQFNGPSNMPNTQIQIGAQNSFTDEHGNTIIGDVITQMPV 391
Query: 278 --DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
S +FS + +NIG VIGKGG I QIR+ SG
Sbjct: 392 QISSSPDKFSEDVFVANSNIGSVIGKGGNNIKQIRESSG 430
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 12/141 (8%)
Query: 268 SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
S+ + S +DD +S S+R+ CPV V+GK G I IR+++ I V +
Sbjct: 99 SKPISSHKKDDDAST-VSVRMYCPVKEAAAVVGKKGEKITHIREKANVRIYVSENLKNVP 157
Query: 328 DCLITVS-SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS---FTTRLLVPTSRIGC 383
+ +I+V S E A++ E+ E + I+ + +LLVP +G
Sbjct: 158 ERVISVKGSAEDVARAFGLITRAIL-------EEPEDEPASITSKQYNLKLLVPHPMVGY 210
Query: 384 LIGKGGSIITEMRRLTKANIR 404
+IGK GS E+ + A ++
Sbjct: 211 IIGKSGSKFREIEENSAAKLK 231
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
S T EA+ +P S K + D+ +S R+ P ++GK G IT +R KAN+
Sbjct: 90 SHTAEAIGSSKPISSHKKDDDASTVS--VRMYCPVKEAAAVVGKKGEKITHIRE--KANV 145
Query: 404 RILPKENLPKI 414
RI ENL +
Sbjct: 146 RIYVSENLKNV 156
>gi|296085941|emb|CBI31382.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 126/285 (44%), Gaps = 54/285 (18%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSASD 97
+ T R+L GS+IG+GG + + + ++I++ E PG+ +R++ + A++
Sbjct: 80 KSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISGATN 139
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAE---ELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
E + K + ++A+ E+ ++ + + +L+VP+ G +
Sbjct: 140 E-----------------IIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGI 182
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
IGKGG +++ ++ A I+I ++ + +D LV + G +A+ I S+L +
Sbjct: 183 IGKGGSTIKSFIEDSQASIKISPQDN--NYLGLTDRLVTLMGSLEEQMRAIDLILSKLTE 240
Query: 215 NPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
+P +Q + + S + + + GP A GG + D S S+
Sbjct: 241 DPHYTQ-FMNAPFSYAAAYNSMNYGPNGA-------------GGKFQNNKEDRSNSVTIG 286
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D+ +IG V+G+GG I I Q SGA IK+
Sbjct: 287 VADE---------------HIGLVVGRGGRNIMDISQASGARIKI 316
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
+P D K +R + A G VIGKGG+ IN + +SGA I++
Sbjct: 72 SPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLS------------- 118
Query: 334 SSKEFFEDT------LSATIEAVVRLQPRCSEKI-------ERDSGLISFTTRLLVPTSR 380
+ EFF T +S +++ K+ + D RL+VP S
Sbjct: 119 RNHEFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSS 178
Query: 381 IGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMT 440
G +IGKGGS I ++A+I+I P++N D +V + G L+ A+ +++
Sbjct: 179 CGGIIGKGGSTIKSFIEDSQASIKISPQDN--NYLGLTDRLVTLMGSLEEQMRAIDLILS 236
Query: 441 RL 442
+L
Sbjct: 237 KL 238
>gi|297810533|ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata]
gi|297318987|gb|EFH49409.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata]
Length = 334
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 133/284 (46%), Gaps = 35/284 (12%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSASDET 99
T R+L GS+IG+GG + + + + ++I++ E PG+ +R++ + + E
Sbjct: 35 THIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEV 94
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAK----LLVPSDQIGCVI 155
++ + L K+H + AE+ G++V + L+VP+ G +I
Sbjct: 95 ---------INGLELILDKLHSELHAED---------GNEVEPRRRIRLVVPNSSCGGII 136
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG +++ E+ A I+I ++ + SD LV +SG +A+ I ++L ++
Sbjct: 137 GKGGATIKSFIEESKAGIKISPLDN--TFYGLSDRLVTLSGTFEEQMRAIDLILAKLTED 194
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
SQ+ + + +S +G P P + G + A + S Y
Sbjct: 195 DHYSQN-----VHSPYSYAGLFYSGFHGPPYAYALPSVATAGYNSVNYAPNGSGGKYQNH 249
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+D+ S+ ++ + +IG V+G+GG I +I Q +GA IK+
Sbjct: 250 KDEAST---TVTIGVADEHIGLVLGRGGRNIMEITQITGARIKI 290
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 80/178 (44%), Gaps = 28/178 (15%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
D + K +R + A G VIGKGG+ I + + +SGA I++ + +E
Sbjct: 29 DSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRN-------------QE 75
Query: 338 FFEDT------LSATIEAVVR-----LQPRCSEKIERDSGLIS--FTTRLLVPTSRIGCL 384
FF T +S +I+ V+ L SE D + RL+VP S G +
Sbjct: 76 FFPGTTDRIIMISGSIKEVINGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGI 135
Query: 385 IGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
IGKGG+ I +KA I+I P +N D +V +SG + A+ ++ +L
Sbjct: 136 IGKGGATIKSFIEESKAGIKISPLDN--TFYGLSDRLVTLSGTFEEQMRAIDLILAKL 191
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
E E +A+ E + + P + E DS R LV + G +IGKGGS ITE +
Sbjct: 2 ESTESYAAASPEELAKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQ 61
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREG 451
K+ RI N D ++ ISG + + L ++ +L + L +G
Sbjct: 62 --AKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVINGLELILDKLHSELHAEDG 114
>gi|348537889|ref|XP_003456425.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Oreochromis
niloticus]
Length = 496
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 36/223 (16%)
Query: 25 KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET--- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 23 KRTNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 74
Query: 82 VPGSEERVVTVYSASDETNAFED--GDKF------------VSPAQDALFKVHDRV---- 123
PG+ ERV + + N D +K VS Q DRV
Sbjct: 75 YPGTTERVCLIQGTVEALNGVHDFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVKQTL 134
Query: 124 -IAEELRGDEDSD---GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
A ED++ +AKL+VP+ G +IGKGG V+ + ++GA +++ +
Sbjct: 135 PTACHTTPKEDANPEKSRRANSAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK- 193
Query: 180 HLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
P + +V ISGE +KA+ I ++ ++P S L
Sbjct: 194 --PEGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCL 234
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 32/183 (17%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL-PSCALRSDELVQISGEASVV 201
K+L+PS G +IGKGGQ + ++ ETGA I++ K + P R + I G +
Sbjct: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER---VCLIQGTVEAL 92
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
IA ++ + P +Q +I ++ V P + A
Sbjct: 93 NGVHDFIAEKVREMPQSTQKTEPVSILQPQTT----VNPDRVKQTLPTA----------- 137
Query: 262 DTAGDWSRSLYSAPRDDL----SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAI 317
++ P++D S + S +L+ P + G +IGKGGA + + ++SGA +
Sbjct: 138 ---------CHTTPKEDANPEKSRRANSAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWV 188
Query: 318 KVD 320
++
Sbjct: 189 QLS 191
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 65/210 (30%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S K+F+ T
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS-------------KDFYPGT 78
Query: 343 ------LSATIEAV----------VRLQPRCSEKIERDSGLISFTT-------------- 372
+ T+EA+ VR P+ ++K E S L TT
Sbjct: 79 TERVCLIQGTVEALNGVHDFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVKQTLPTAC 138
Query: 373 -------------------RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPK 413
+L+VP S G +IGKGG+ + + + A +++ K P+
Sbjct: 139 HTTPKEDANPEKSRRANSAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PE 195
Query: 414 IASEDDEMVQISGDLDLAKDALIQVMTRLR 443
+ + +V ISG+ + + A+ ++ +++
Sbjct: 196 GINLQERVVTISGEPEQNRKAVEIIVQKIQ 225
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + ++A L E G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 383 ATNGYLSAASPLVASSLLATEKLAEGAKEVVEIAVPENLVGAILGKGGKTLVEYQELTGA 442
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I+ R+
Sbjct: 443 RIQISKKGEFIPGTRNRK---VTITGSQAATQAAQYLISQRI 481
>gi|154319404|ref|XP_001559019.1| hypothetical protein BC1G_02183 [Botryotinia fuckeliana B05.10]
Length = 453
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 135/316 (42%), Gaps = 64/316 (20%)
Query: 56 SIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDA 115
++IG+GGE V +R + +K + + G+ ER++TV S DA
Sbjct: 139 TVIGKGGENVSLVRKLSGAKCTVSDYQKGAVERILTV-----------------SGVVDA 181
Query: 116 LFKVHDRVI----AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
+ K +I E L DS +LL+P IG +IGKGG ++ I+ +GA
Sbjct: 182 VAKAFGLIIRTLNNEPLEAPSDSTS-KTYPLRLLIPHILIGSIIGKGGVRIKEIQEASGA 240
Query: 172 QIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSH 231
++ D +LP L ++ + + G A V A + S L + ++ A S
Sbjct: 241 RLN-ASDSYLP---LSTERSLVVLGVADAVHIATYYVGSTLFEQ--LTERFGGPAASAYA 294
Query: 232 SSSGSLVGPTAATP---------------------IVG--IAPLMGPYGGY---KGDTAG 265
S SG GP P I G +P +G YGG + AG
Sbjct: 295 SRSG---GPAGVVPGAMPNHTVKDRHLTNSQLPLHITGGHASPAVGGYGGVGPQQPQQAG 351
Query: 266 DWSRSLYSA--PRDD-----LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIK 318
+ A P+ + + + ++ P +G +IGKGGA IN+IRQ SG+ IK
Sbjct: 352 HAVPQPHGATGPQGQPMPGAIPGQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIK 411
Query: 319 VDSSSTEGDDCLITVS 334
++ ++ L+T++
Sbjct: 412 INEPQDNSNERLVTIT 427
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 5/130 (3%)
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
P D+ S +R V A VIGKGG ++ +R+ SGA V + ++TVS
Sbjct: 119 PHDE--SGWIHVRSVITSAEAATVIGKGGENVSLVRKLSGAKCTVSDYQKGAVERILTVS 176
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITE 394
D ++ ++R + DS ++ RLL+P IG +IGKGG I E
Sbjct: 177 G---VVDAVAKAFGLIIRTLNNEPLEAPSDSTSKTYPLRLLIPHILIGSIIGKGGVRIKE 233
Query: 395 MRRLTKANIR 404
++ + A +
Sbjct: 234 IQEASGARLN 243
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
G +T ++ +P+D +G +IGKGG + IR +G+ I+I + + ++ LV I+G
Sbjct: 374 GQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDN-----SNERLVTITG 428
Query: 197 EASVVKKALCQIASRL 212
A + AL + SRL
Sbjct: 429 TAECNQMALYMLYSRL 444
>gi|340728851|ref|XP_003402727.1| PREDICTED: far upstream element-binding protein 1-like [Bombus
terrestris]
Length = 738
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 161/389 (41%), Gaps = 83/389 (21%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFV 109
P +G IIGRGGE + +L+ +T KI++ G ER+ T+ + + N ++
Sbjct: 115 PDNMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLPERLCTLTGSREAVNRAKE----- 169
Query: 110 SPAQDALFKVHDRVIAEELRGDEDSDGG---HQVTAKLLVPSDQIGCVIGKGGQIVQNIR 166
L V+ R E + S GG H ++++P ++G +IGKGG+ ++ ++
Sbjct: 170 ----LVLSIVNQRSRTEGIGDMGGSSGGLMSHSGFVEIMIPGPKVGLIIGKGGETIKQLQ 225
Query: 167 SETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASA 226
++GA++ ++++ + ++ ++I+G+ V+ A + + + Q A
Sbjct: 226 EKSGAKMVVIQE----GPSQEQEKPLRITGDPQKVEYAKQLVYELIAE--KEMQMFHRGA 279
Query: 227 ISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSL 286
N S G+ + D S + S D +
Sbjct: 280 RGNDRS----------------------------GNYSNDSSFNHGSGTTD-------GV 304
Query: 287 RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD---DCLITVSSK--EFFED 341
++ P A +G VIGKGG +I +I+ E+GA ++ +G C+++ + E
Sbjct: 305 EVLVPRAAVGVVIGKGGDMIKKIQAETGARVQFQQGREDGPGDRKCIVSGKHQAVEQVRQ 364
Query: 342 TLSATIEAVVR----------------------LQPRCSEKIERDSG---LISFTTRLLV 376
+ I++V+R P +R G T V
Sbjct: 365 RIQELIDSVMRRDDGRSNIGARSGPRGNGFGNNRNPNEYGGWDRRQGGPMQDKIETMFTV 424
Query: 377 PTSRIGCLIGKGGSIITEMRRLTKANIRI 405
P+S+ G +IGKGG I ++ + T A+ +
Sbjct: 425 PSSKCGIIIGKGGETIKQINQQTGAHCEL 453
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 131/306 (42%), Gaps = 46/306 (15%)
Query: 48 LCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDK 107
+ P K+G IIG+GGE +KQL+ + +K+ + + P E+ + + +
Sbjct: 204 MIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQLV 263
Query: 108 FVSPAQDALFKVHDRVIAEELRGDEDSDG------GHQVTAKLLVPSDQIGCVIGKGGQI 161
+ A+ + H + G+ +D G ++LVP +G VIGKGG +
Sbjct: 264 YELIAEKEMQMFHRGARGNDRSGNYSNDSSFNHGSGTTDGVEVLVPRAAVGVVIGKGGDM 323
Query: 162 VQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
++ I++ETGA+++ + E P D +SG+ V+ Q+ R+ Q
Sbjct: 324 IKKIQAETGARVQFQQGREDGP-----GDRKCIVSGKHQAVE----QVRQRI-------Q 367
Query: 221 HLLASAI--SNSHSSSGSLVGPTAATPIVGIAPLMGP--YGGYKGDTAGDWSRSLYSAPR 276
L+ S + + S+ G+ GP G P YGG W R +
Sbjct: 368 ELIDSVMRRDDGRSNIGARSGPRGN----GFGNNRNPNEYGG--------WDRRQGGPMQ 415
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD--SSSTEGDDCLITVS 334
D + + P + G +IGKGG I QI Q++GA ++D + S E + I
Sbjct: 416 DKIET-----MFTVPSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQSNENEKIFIIRG 470
Query: 335 SKEFFE 340
+ E E
Sbjct: 471 NPEQVE 476
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 112/280 (40%), Gaps = 72/280 (25%)
Query: 144 LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKK 203
+ VP + +G +IG+GG+ + ++SETG +I++ P + L ++G V +
Sbjct: 112 IRVPDNMVGLIIGRGGEQITRLQSETGCKIQMA-----PESGGLPERLCTLTGSREAVNR 166
Query: 204 ALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDT 263
A L +I N S + GI + G GG
Sbjct: 167 A----------------KELVLSIVNQRSRT------------EGIGDMGGSSGG----- 193
Query: 264 AGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV--DS 321
L S + ++ P +G +IGKGG I Q++++SGA + V +
Sbjct: 194 ---------------LMSHSGFVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEG 238
Query: 322 SSTE--------GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFT-- 371
S E GD + + + +E ++ R R +++ S SF
Sbjct: 239 PSQEQEKPLRITGDPQKVEYAKQLVYELIAEKEMQMFHRG-ARGNDRSGNYSNDSSFNHG 297
Query: 372 ------TRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+LVP + +G +IGKGG +I +++ T A ++
Sbjct: 298 SGTTDGVEVLVPRAAVGVVIGKGGDMIKKIQAETGARVQF 337
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 87/183 (47%), Gaps = 29/183 (15%)
Query: 291 PVANIGGV---------------IGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
P+ N+GG+ IG+GG I +++ E+G I++ S + L T++
Sbjct: 100 PIGNVGGICNEDIRVPDNMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLPERLCTLTG 159
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIE----RDSGLISFT--TRLLVPTSRIGCLIGKGG 389
+ + ++V + R +E I GL+S + +++P ++G +IGKGG
Sbjct: 160 SREAVNRAKELVLSIVNQRSR-TEGIGDMGGSSGGLMSHSGFVEIMIPGPKVGLIIGKGG 218
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD---LDLAKDALIQVMTRLRANL 446
I +++ + A + ++ + + E ++ ++I+GD ++ AK + +++ +
Sbjct: 219 ETIKQLQEKSGAKMVVIQE----GPSQEQEKPLRITGDPQKVEYAKQLVYELIAEKEMQM 274
Query: 447 FDR 449
F R
Sbjct: 275 FHR 277
>gi|33150676|gb|AAP97216.1|AF092441_1 CBP [Homo sapiens]
Length = 397
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 138/299 (46%), Gaps = 37/299 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSFLERITTI---TGSTAAVFH 74
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ FK+ + + A G S VT +L++P+ Q G +IG+ G ++
Sbjct: 75 AVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGQAGTKIKE 126
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLA 224
IR TGAQ+++ D P+ R+ V +SG + + QI + + ++P + +
Sbjct: 127 IRETTGAQVQVAGD-LFPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATI-- 180
Query: 225 SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA---------P 275
+ S SL G + G + + G YG + A P
Sbjct: 181 -----PYHPSLSL-GTVLLSANQGFS-VQGQYGAVTQREVTKLQQLSSHAVPFATPSVVP 233
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
D ++ S + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T++
Sbjct: 234 GLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 292
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 128/298 (42%), Gaps = 52/298 (17%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + L +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSFL-------ER 61
Query: 191 LVQISGEASVVKKALCQIASRLHD----------NPSRSQHLLASAISNSHSSSGSLVGP 240
+ I+G + V A+ IA +L + N SR L I S GSL+G
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQC--GSLIG- 118
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWS-RSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
A T I I G GD + + R++ + D + +R +C
Sbjct: 119 QAGTKIKEIRETTGAQVQVAGDLFPNSTERAVTVSGVPD--AIILCVRQIC--------- 167
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE---DTLSATIEAVVRLQPR 356
A+I + GA I S + G + +S+ + F + T V +LQ
Sbjct: 168 ----AVILE-SPPKGATIPYHPSLSLGT---VLLSANQGFSVQGQYGAVTQREVTKLQQL 219
Query: 357 CSEKIE---------RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
S + D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 220 SSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>gi|383849051|ref|XP_003700160.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Megachile rotundata]
Length = 460
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 35/194 (18%)
Query: 23 PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
P+KR GDD R L P + GSIIG+GG+ + +LR K+ I + +
Sbjct: 38 PHKRYRQGDDE-----------LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPD-C 85
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
PG E RV+T+ S + +V + V+ L + G ++
Sbjct: 86 PGPE-RVLTISSD-----------------LPTVLQVLNEVVPN-LEENGSRHGSDEIDV 126
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
++LV Q GC+IGKGG ++ +R +TGA+I+I C +D L+ I G+ S
Sbjct: 127 RMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSH----CCPHSTDRLISICGKPSTCI 182
Query: 203 KALCQIASRLHDNP 216
+ ++ + + +P
Sbjct: 183 DCIRELIATIKTSP 196
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
++P + LRL+ P G +IGKGG I ++R + A+I V G + ++T
Sbjct: 36 TSPHKRYRQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIV--PDCPGPERVLT 93
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+SS L ++ + + P E R G R+LV S+ GC+IGKGG I
Sbjct: 94 ISSD------LPTVLQVLNEVVPNLEENGSR-HGSDEIDVRMLVHQSQAGCIIGKGGLKI 146
Query: 393 TEMRRLTKANIRI 405
E+R T A I+I
Sbjct: 147 KELREKTGARIKI 159
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 52/87 (59%), Gaps = 5/87 (5%)
Query: 129 RGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRS 188
+G++ + G ++ + ++ +P D G +IGKGG ++ IRS++GA I I DE LP +
Sbjct: 375 QGNQGNMGSNKTSTQVTIPKDLAGAIIGKGGARIRKIRSDSGAGITI--DEPLPGS---N 429
Query: 189 DELVQISGEASVVKKALCQIASRLHDN 215
D ++ I+G S ++ A + +H+N
Sbjct: 430 DRIITITGLPSQIQMAQYLLQQSVHEN 456
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 29 TGDDR-DQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEE 87
TG+++ +Q +G T + P G+IIG+GG ++++R D+ + I I E +PGS +
Sbjct: 371 TGNNQGNQGNMGSNKTSTQVTIPKDLAGAIIGKGGARIRKIRSDSGAGITIDEPLPGSND 430
Query: 88 RVVTV 92
R++T+
Sbjct: 431 RIITI 435
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
++ S + S ++ P G +IGKGGA I +IR +SGA I +D +D +IT++
Sbjct: 380 NMGSNKTSTQVTIPKDLAGAIIGKGGARIRKIRSDSGAGITIDEPLPGSNDRIITIT 436
>gi|340718655|ref|XP_003397779.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Bombus
terrestris]
Length = 466
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 35/194 (18%)
Query: 23 PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
P+KR GDD R L P + GSIIG+GG+ + +LR K+ I + +
Sbjct: 52 PHKRYRQGDDE-----------LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPD-C 99
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
PG E RV+T+ S + +V + V+ L + G ++
Sbjct: 100 PGPE-RVLTISSD-----------------LPTVLQVLNEVVPN-LEENGSRHGSDEIDV 140
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
++LV Q GC+IGKGG ++ +R +TGA+I+I C +D L+ I G+ +
Sbjct: 141 RMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSH----CCPHSTDRLISICGKPNTCI 196
Query: 203 KALCQIASRLHDNP 216
+ + ++ + + +P
Sbjct: 197 ECIRELIATIKTSP 210
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
++P + LRL+ P G +IGKGG I ++R + A+I V G + ++T
Sbjct: 50 TSPHKRYRQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIV--PDCPGPERVLT 107
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+SS L ++ + + P E R G R+LV S+ GC+IGKGG I
Sbjct: 108 ISSD------LPTVLQVLNEVVPNLEENGSR-HGSDEIDVRMLVHQSQAGCIIGKGGLKI 160
Query: 393 TEMRRLTKANIRI 405
E+R T A I+I
Sbjct: 161 KELREKTGARIKI 173
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
+ T ++ +P D G +IGKGG ++ +RS++GA I I DE L + +D ++ I+G
Sbjct: 391 KTTTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI--DEPL---SGSNDRIITITGLP 445
Query: 199 SVVKKALCQIASRLHDN 215
S ++ A + +H+N
Sbjct: 446 SQIQMAQYLLQQSVHEN 462
>gi|194383878|dbj|BAG59297.1| unnamed protein product [Homo sapiens]
Length = 300
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 134/302 (44%), Gaps = 53/302 (17%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
++ K+L + +G +IGK G+ ++ I ETG +I I + L + + + G
Sbjct: 18 EIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTV 75
Query: 199 SVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGG 258
A +I +L + + +LA N+HS S + P GP+
Sbjct: 76 EACASAEIEIMKKLRE--AFENDMLAV---NTHSGYFSSLYPHHQ---------FGPFPH 121
Query: 259 YKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIK 318
+ +S P ++ + L P +G +IGK GA I Q+ + +GA+IK
Sbjct: 122 H------------HSYPEQEI------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIK 163
Query: 319 VDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTR 373
+ + EG D VS + ++ EA + Q R K++ ++ +
Sbjct: 164 I--APAEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAH 214
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAK 432
+ VP+S G +IGKGG + E++ LT A + I+P+ P E++E +V+I G ++
Sbjct: 215 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRGQTP---DENEEVIVRIIGHFFASQ 270
Query: 433 DA 434
A
Sbjct: 271 TA 272
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 17/135 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 126 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 184
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 185 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 229
Query: 159 GQIVQNIRSETGAQI 173
G+ V +++ T A++
Sbjct: 230 GKTVNELQNLTSAEV 244
>gi|452846671|gb|EME48603.1| hypothetical protein DOTSEDRAFT_67594 [Dothistroma septosporum
NZE10]
Length = 361
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 133/288 (46%), Gaps = 33/288 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + ++ G IIG+ G+ V LR T + + + VPG +RV+TV A D
Sbjct: 45 RAIVTSKEAGVIIGKAGQNVADLREKTGVRAGVSKVVPGVHDRVLTVTGA---LTGIADA 101
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
V+ D+L K ++ + G+ ++ H + +LL+ +Q+G +IG+ G ++ I
Sbjct: 102 YGLVA---DSLVKGAPQMGMGGVVGNPNT---HPI--RLLISHNQMGTIIGRQGLKIKQI 153
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH--LL 223
+ +G ++ + + E LP R +V++ G ++KA+ +I L D+ R L
Sbjct: 154 QDASGVRM-VAQKEMLPQSTER---IVEVQGTPDGIQKAVWEIGKCLVDDEQRGYGTVLY 209
Query: 224 ASAI-----SNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR-- 276
+ A+ + +G+ VGP A G + G +S P
Sbjct: 210 SPAVRVQGGGPPLNGTGAPVGPGAGYGAPRSYNRTGNGADFTGAAPAPYSPRRQEGPLPT 269
Query: 277 -----DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+D+ ++ S+ P +G +IG+GG+ I++IR+ SGA I +
Sbjct: 270 TNEDGEDIQTQNISI----PADMVGCIIGRGGSKISEIRKSSGARISI 313
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+ DG T + +P+D +GC+IG+GG + IR +GA+I I K H + + +
Sbjct: 271 NEDGEDIQTQNISIPADMVGCIIGRGGSKISEIRKSSGARISIAKAPHDET----GERMF 326
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASA 226
I+G ++ +KAL + L R + +A
Sbjct: 327 TITGGSAANEKALYLLYENLEAEKMRRSQIPEAA 360
>gi|402590061|gb|EJW83992.1| hypothetical protein WUBG_05097, partial [Wuchereria bancrofti]
Length = 210
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 53 KIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPA 112
++GSIIG+ G+ +K +R + +KI I + ER+VT+ + N
Sbjct: 1 EVGSIIGKRGDHIKLIRDQSGAKINISDG--SCPERIVTITGSIGTINKA---------- 48
Query: 113 QDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQ 172
F + + ++L+ +S +T +L+VP+ Q GC+IGKGG ++ IR TGA
Sbjct: 49 ----FGMICAKLQQDLQALPNSIPKPPITMRLIVPATQCGCIIGKGGTKIKEIREATGAS 104
Query: 173 IRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
I++ E LPS R+ V ISG A + + I L + P + L
Sbjct: 105 IQV-ASEMLPSSTERA---VTISGSADSIVDCMRNICQILLEAPPKGNTL 150
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 70/145 (48%), Gaps = 17/145 (11%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS----SKEFFEDTLSATIEAV 350
+G +IGK G I IR +SGA I + S IT S +K F + A ++
Sbjct: 2 VGSIIGKRGDHIKLIRDQSGAKINISDGSCPERIVTITGSIGTINKAF--GMICAKLQQD 59
Query: 351 VRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKEN 410
++ P K T RL+VP ++ GC+IGKGG+ I E+R T A+I++ E
Sbjct: 60 LQALPNSIPKPP-------ITMRLIVPATQCGCIIGKGGTKIKEIREATGASIQVA-SEM 111
Query: 411 LPKIASEDDEMVQISGDLDLAKDAL 435
LP S + V ISG D D +
Sbjct: 112 LP---SSTERAVTISGSADSIVDCM 133
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 246 IVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAI 305
IV I +G G + L + P + + ++RL+ P G +IGKGG
Sbjct: 35 IVTITGSIGTINKAFGMICAKLQQDLQALP-NSIPKPPITMRLIVPATQCGCIIGKGGTK 93
Query: 306 INQIRQESGAAIKVDS----SSTE 325
I +IR+ +GA+I+V S SSTE
Sbjct: 94 IKEIREATGASIQVASEMLPSSTE 117
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + G IIG+GG +K++R T + I++ E +P S ER VT+ ++D
Sbjct: 74 MRLIVPATQCGCIIGKGGTKIKEIREATGASIQVASEMLPSSTERAVTISGSAD 127
>gi|17737727|ref|NP_524208.1| mushroom-body expressed, isoform A [Drosophila melanogaster]
gi|1770212|emb|CAA67719.1| nucleic acid binding protein [Drosophila melanogaster]
gi|7296507|gb|AAF51792.1| mushroom-body expressed, isoform A [Drosophila melanogaster]
Length = 386
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 20/168 (11%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIV + R ++ +KI I + GS ER+VTV S TNA ++
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISD---GSCPERIVTV---SGTTNAIFSAFTLIT 86
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+ + D G Q+ +L+VP+ Q G +IGK G ++ IR TG
Sbjct: 87 KKFEEWCSQFN---------DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
I++ E LP+ R+ V +SG A + + + QI + ++P R
Sbjct: 138 CSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESPPR 181
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S ++ ++ F
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIF- 79
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFT---TRLLVPTSRIGCLIGKGGSIITEMRR 397
SA + + CS+ D G + T RL+VP S+ G LIGK GS I E+R+
Sbjct: 80 ---SAFTLITKKFEEWCSQF--NDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
T +I++ E LP + + V +SG + + Q+
Sbjct: 135 TTGCSIQVA-SEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
+LR ++ Q ++ V +D IGC+IGKGG + IR +GA IRI E
Sbjct: 277 QLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERE--GG 334
Query: 187 RSDELVQISGEASVVKKALCQIASRL 212
+D + ISG V A I R+
Sbjct: 335 NTDRTITISGNPDSVALAQYLINMRI 360
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ V IGC+IGKGG+ I E+R+++ A IRI E + D + ISG+ D
Sbjct: 294 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSV-- 349
Query: 434 ALIQVMTRLRANL 446
AL Q + +R ++
Sbjct: 350 ALAQYLINMRISM 362
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV R E+GA+I I D P + +V +SG +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTN 76
Query: 200 VVKKALCQIASRLHD 214
+ A I + +
Sbjct: 77 AIFSAFTLITKKFEE 91
>gi|451855342|gb|EMD68634.1| hypothetical protein COCSADRAFT_350318 [Cochliobolus sativus
ND90Pr]
Length = 488
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 133/344 (38%), Gaps = 80/344 (23%)
Query: 56 SIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDA 115
+IIG+GGE V Q+R + +K + + G+ ER++TV D A
Sbjct: 142 TIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVD--------------AVSK 187
Query: 116 LFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
F + R + +E + +LL+P IG +IGK G ++ I+ + A++
Sbjct: 188 AFGLIVRTLNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAKLN- 246
Query: 176 LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN-------PSRSQHLLASAIS 228
D LP+ RS + + G A V A+ +A L + P+ SQ+ S ++
Sbjct: 247 ASDTLLPNSGERS---LIVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMA 303
Query: 229 NSHSSSGSLVGPTAATPIVG---------------------------------------- 248
+ G V P P G
Sbjct: 304 ANVVPGGMSVQPYVPQPAGGQYSHPQNFRRQEPAQRTPAHGGYGAPHMHGQPPQQSPYGH 363
Query: 249 -------IAPLMGPYGGYKGDTA--------GDWSRSLYSAPRDDLSSKEFSLRLVCPVA 293
+P GPYGG T + AP + + + ++ P
Sbjct: 364 PNMPYGAASPSRGPYGGPAAPTPYGAHPAAAPVAHGAAPHAPVGAIPGQPLTQQIFIPND 423
Query: 294 NIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
+G +IGKGGA IN+IRQ SG+ IK++ + ++ L+T++ +
Sbjct: 424 MVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTITGTQ 467
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IGKGG + QIR+ SGA V S + ++TVS + D +S +VR +
Sbjct: 143 IIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQ---VDAVSKAFGLIVRTLNQE 199
Query: 358 SEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
+ S ++ RLL+P IG +IGK G I E++ + A +
Sbjct: 200 DLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAKL 245
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI-LPKENLPKIASEDDEMVQISGDL 428
T ++ +P +G +IGKGG+ I E+R+L+ + I+I P +N ++ +V I+G
Sbjct: 414 LTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDN------SNERLVTITGTQ 467
Query: 429 DLAKDALIQVMTRLRA 444
+ + AL + +RL +
Sbjct: 468 ECNQMALYMLYSRLES 483
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
G +T ++ +P+D +G +IGKGG + IR +G+ I+I + ++ LV I+G
Sbjct: 411 GQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINE-----PTDNSNERLVTITG 465
Query: 197 EASVVKKALCQIASRLHDNPSR 218
+ AL + SRL R
Sbjct: 466 TQECNQMALYMLYSRLESEKHR 487
>gi|409045569|gb|EKM55049.1| hypothetical protein PHACADRAFT_95060 [Phanerochaete carnosa
HHB-10118-sp]
Length = 409
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 120/264 (45%), Gaps = 38/264 (14%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIG+ G V ++R + +++ + E++PG+ ER++ V D A
Sbjct: 124 IIGKAGTHVNEIREKSGARVMVSESIPGNPERILNVSGPLD--------------AVSKA 169
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT K ++P+ ++G VIGKGG ++ I+ +GA++
Sbjct: 170 FGLIVRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARLN-A 228
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRL-HDNPSRSQHLLASAISNSHSSSG 235
+ LP R ++ +SG A + A I + L N + +S +S S S
Sbjct: 229 SEGMLPGSTER---VLSVSGVADAIHIATYYIGNILIEANERMPSYQNSSYRPSSTSRSR 285
Query: 236 SLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANI 295
+ ++ PI + L+ P+ G A ++ +Y +DL +
Sbjct: 286 APYQGSSYVPIGHASALLQPHAPPPG--AQLQTQQIYIP--NDL---------------V 326
Query: 296 GGVIGKGGAIINQIRQESGAAIKV 319
G +IGKGG+ IN+IR S + IK+
Sbjct: 327 GCIIGKGGSKINEIRHVSASQIKI 350
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 98/210 (46%), Gaps = 34/210 (16%)
Query: 37 IIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSA 95
+ G +++ P ++GS+IG+GG +K+++ + +++ E +PGS ERV++V
Sbjct: 187 VPGSRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARLNASEGMLPGSTERVLSVSGV 246
Query: 96 SDET--------NAFEDGDKFVSPAQDALFKVHDRVIAEE----------------LRGD 131
+D N + ++ + Q++ ++ + L+
Sbjct: 247 ADAIHIATYYIGNILIEANERMPSYQNSSYRPSSTSRSRAPYQGSSYVPIGHASALLQPH 306
Query: 132 EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD---------EHLP 182
G T ++ +P+D +GC+IGKGG + IR + +QI+I++ + P
Sbjct: 307 APPPGAQLQTQQIYIPNDLVGCIIGKGGSKINEIRHVSASQIKIMEPGAVGVGMNGQPAP 366
Query: 183 SCALRSDELVQISGEASVVKKALCQIASRL 212
+ A + LV I+G + ++ A+ + SRL
Sbjct: 367 AAAHEGERLVVITGAPNNIQIAVQLLYSRL 396
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 126/317 (39%), Gaps = 50/317 (15%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
+ L+ + +IGK G V IR ++GA R++ E +P R ++ +SG V
Sbjct: 113 RCLIVTQDASIIIGKAGTHVNEIREKSGA--RVMVSESIPGNPER---ILNVSGPLDAVS 167
Query: 203 KALCQIASRLHDNPSRSQHLLAS-------AISNSHSSSGSLVGPTAATPIVGIAPLMGP 255
KA I R++D P + S I NS GS++G
Sbjct: 168 KAFGLIVRRINDEPFDKPSVPGSRAVTIKFMIPNSR--MGSVIG---------------- 209
Query: 256 YGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGA 315
GG K D S + +A L S V V+ + I I I E+
Sbjct: 210 KGGAKIKEIQDASGARLNASEGMLPG---STERVLSVSGVADAIHIATYYIGNILIEANE 266
Query: 316 AIKVDSSSTEGDDCLITVSSKEFFEDTLSATI-EAVVRLQPRCSEKIERDSGLISFTTRL 374
+ +S+ T S+ ++ + I A LQP G T ++
Sbjct: 267 RMPSYQNSSYRPSS--TSRSRAPYQGSSYVPIGHASALLQPHAPPP-----GAQLQTQQI 319
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPK---------ENLPKIASEDDEMVQIS 425
+P +GC+IGKGGS I E+R ++ + I+I+ + P A E + +V I+
Sbjct: 320 YIPNDLVGCIIGKGGSKINEIRHVSASQIKIMEPGAVGVGMNGQPAPAAAHEGERLVVIT 379
Query: 426 GDLDLAKDALIQVMTRL 442
G + + A+ + +RL
Sbjct: 380 GAPNNIQIAVQLLYSRL 396
>gi|383863653|ref|XP_003707294.1| PREDICTED: RNA-binding protein Nova-2-like isoform 1 [Megachile
rotundata]
Length = 514
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 35/210 (16%)
Query: 19 ADHGPNKRRYTGDDRDQFIIGPEDTVY-RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIR 77
A++G KR + G G + T + + L P G+IIG+GG+ + QL+ DT +K++
Sbjct: 27 AENGATKRSHYGS-------GGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVK 79
Query: 78 IGET---VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDS 134
I ++ PG+ ERV + + + A D F+ D + + D L+ DS
Sbjct: 80 ISKSHDFYPGTTERVCLITGSLEAIMAVMD---FI---MDKIREKPDLT----LKTTVDS 129
Query: 135 DGGHQVT-----AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI---LKDEHLPSCAL 186
+ G K+LVP+ G +IGK G ++ I+ E+G+ ++I KD L
Sbjct: 130 ESGKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDVSL----- 184
Query: 187 RSDELVQISGEASVVKKALCQIASRLHDNP 216
+ + + GE + AL I +++ D+P
Sbjct: 185 -QERCITVIGEKENNRNALMMILAKVADDP 213
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 20/189 (10%)
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS-- 322
G RS Y + D + L+++ P G +IGKGG I Q+++++GA +K+ S
Sbjct: 30 GATKRSHYGSGGDG----TYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHD 85
Query: 323 ---STEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT------R 373
T CLIT S + + I +R +P + K DS T +
Sbjct: 86 FYPGTTERVCLITGSLEAIM--AVMDFIMDKIREKPDLTLKTTVDSESGKTTAERDKQVK 143
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+LVP S G +IGK G+ I +++ + + ++I K K S + + + G+ + ++
Sbjct: 144 ILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKA---KDVSLQERCITVIGEKENNRN 200
Query: 434 ALIQVMTRL 442
AL+ ++ ++
Sbjct: 201 ALMMILAKV 209
>gi|452004384|gb|EMD96840.1| hypothetical protein COCHEDRAFT_1220374 [Cochliobolus
heterostrophus C5]
Length = 489
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 133/345 (38%), Gaps = 81/345 (23%)
Query: 56 SIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDA 115
+IIG+GGE V Q+R + +K + + G+ ER++TV D A
Sbjct: 142 TIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVD--------------AVSK 187
Query: 116 LFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
F + R + +E + +LL+P IG +IGK G ++ I+ + A++
Sbjct: 188 AFGLIVRTLNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAKLN- 246
Query: 176 LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN-------PSRSQHLLASAIS 228
D LP+ RS + + G A V A+ +A L + P+ SQ+ S ++
Sbjct: 247 ASDTLLPNSGERS---LIVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMA 303
Query: 229 NSHSSSGSLVGPTAATPIVG---------------------------------------- 248
+ G V P P G
Sbjct: 304 ANVVPGGMSVQPYVPQPAGGQYSHPQNFRRQEPAQRTPAHGGGYGAPHMHGQPPQQSPYG 363
Query: 249 --------IAPLMGPYGGYKGDTA--------GDWSRSLYSAPRDDLSSKEFSLRLVCPV 292
+P GPYGG T + AP + + + ++ P
Sbjct: 364 HPNMPYGAASPSRGPYGGPAAPTPYGAHPAAAPVAHGAAPHAPVGSIPGQPLTQQIFIPN 423
Query: 293 ANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
+G +IGKGGA IN+IRQ SG+ IK++ + ++ L+T++ +
Sbjct: 424 DMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTITGTQ 468
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IGKGG + QIR+ SGA V S + ++TVS + D +S +VR +
Sbjct: 143 IIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQ---VDAVSKAFGLIVRTLNQE 199
Query: 358 SEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
+ S ++ RLL+P IG +IGK G I E++ + A +
Sbjct: 200 DLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAKL 245
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI-LPKENLPKIASEDDEMVQISGDL 428
T ++ +P +G +IGKGG+ I E+R+L+ + I+I P +N ++ +V I+G
Sbjct: 415 LTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDN------SNERLVTITGTQ 468
Query: 429 DLAKDALIQVMTRLRA 444
+ + AL + +RL +
Sbjct: 469 ECNQMALYMLYSRLES 484
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
G +T ++ +P+D +G +IGKGG + IR +G+ I+I + ++ LV I+G
Sbjct: 412 GQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINE-----PTDNSNERLVTITG 466
Query: 197 EASVVKKALCQIASRLHDNPSR 218
+ AL + SRL R
Sbjct: 467 TQECNQMALYMLYSRLESEKHR 488
>gi|30680512|ref|NP_850764.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
gi|332003360|gb|AED90743.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
Length = 334
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 133/284 (46%), Gaps = 35/284 (12%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSASDET 99
T R+L GS+IG+GG + + + + ++I++ E PG+ +R++ + + E
Sbjct: 35 THIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEV 94
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAK----LLVPSDQIGCVI 155
V+ + L K+H + AE+ G++V + L+VP+ G +I
Sbjct: 95 ---------VNGLELILDKLHSELHAED---------GNEVEPRRRIRLVVPNSSCGGII 136
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG +++ E+ A I+I ++ + SD LV +SG +A+ I ++L ++
Sbjct: 137 GKGGATIKSFIEESKAGIKISPLDN--TFYGLSDRLVTLSGTFEEQMRAIDLILAKLTED 194
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
SQ+ + + +S +G P P + G + A + S Y
Sbjct: 195 DHYSQN-----VHSPYSYAGLFYSGFHGPPYAYALPSVATAGYNSVNYAPNGSGGKYQNH 249
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+++ S+ ++ + +IG V+G+GG I +I Q +GA IK+
Sbjct: 250 KEEAST---TVTIGVADEHIGLVLGRGGRNIMEITQMTGARIKI 290
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 28/178 (15%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
D + K +R + A G VIGKGG+ I + + +SGA I++ + +E
Sbjct: 29 DSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRN-------------QE 75
Query: 338 FFEDT------LSATIEAVVR-----LQPRCSEKIERDSGLIS--FTTRLLVPTSRIGCL 384
FF T +S +I+ VV L SE D + RL+VP S G +
Sbjct: 76 FFPGTTDRIIMISGSIKEVVNGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGI 135
Query: 385 IGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
IGKGG+ I +KA I+I P +N D +V +SG + A+ ++ +L
Sbjct: 136 IGKGGATIKSFIEESKAGIKISPLDN--TFYGLSDRLVTLSGTFEEQMRAIDLILAKL 191
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
E E + + E + + P + E DS R LV + G +IGKGGS ITE +
Sbjct: 2 ESTESYAAGSPEELAKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQ 61
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREG 451
K+ RI N D ++ ISG + + L ++ +L + L +G
Sbjct: 62 --AKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDKLHSELHAEDG 114
>gi|320588068|gb|EFX00543.1| kh domain protein RNA-binding protein [Grosmannia clavigera kw1407]
Length = 375
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 138/298 (46%), Gaps = 43/298 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + ++ G IIG+GG+ V LR +T K + + V G +RV+T+ D +
Sbjct: 50 RAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCDAIS----- 104
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ A+ L V + L+G +G H + KLL+ +Q+G VIG+GG +++I
Sbjct: 105 KAYAVVARALLEGVPTMGMGGILQG----NGTHPI--KLLISHNQMGTVIGRGGLKIKHI 158
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR-SQHLLA 224
+ +G ++ KD LP R +V++ G ++KA+ +I L D+ R + +L
Sbjct: 159 QDVSGVRMVAQKD-ILPQSTER---IVEVQGTPEGIQKAVWEICKCLVDDWQRGTGTVLY 214
Query: 225 SAISNSHSSSGSL----VGPTAATPIVGIAPLMGPYGGYKGDTAG---DWSRSLYSAPRD 277
+ + + +S +L + PT+ G + YG + G D+S S P +
Sbjct: 215 NPVVRTQGTSPTLGSGSIAPTSNYNSGGRS----EYGNSRVTRTGNGADFSNGASSRPNN 270
Query: 278 DLSSKEFSLR----------------LVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S + + R + P +G +IG+ G+ I++IR+ SGA I +
Sbjct: 271 RRSDSDAAARGPPTHDEQGNEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISI 328
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 132 EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
D G T + +P+D +GC+IG+ G + IR +GA+I I K H + + +
Sbjct: 285 HDEQGNEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDET----GERM 340
Query: 192 VQISGEASVVKKALCQIASRL 212
I G A + AL + L
Sbjct: 341 FTIMGSAKANETALFLLYENL 361
>gi|74007267|ref|XP_548937.2| PREDICTED: poly(rC)-binding protein 1-like [Canis lupus familiaris]
Length = 362
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 156/370 (42%), Gaps = 75/370 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE K+ R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHRKEVGSIIGKKGESPKRFRKESGARINISEG--NCPERIITLTGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFVMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPAYQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 172
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
S I + S V G A GY DT L P D
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRWGYAAGYPHAAGYPHDT-----HYLEGPPLDA 227
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQI-RQESGAAIKVDSSSTEGDDCLITVSSKE 337
S + V P+ A +NQ+ RQ+S A+ + G D +S E
Sbjct: 228 YSIQ--GQHTVSPLDL---------AKLNQVARQQSHFAMMHGGTGFAGIDS----NSPE 272
Query: 338 F--FEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
+ +L A+ + T +P + IGC+IG+ G+ I E+
Sbjct: 273 VKGYWASLDASTQT---------------------THEFTIPNNLIGCIIGRQGANINEI 311
Query: 396 RRLTKANIRI 405
R+++ A I+I
Sbjct: 312 RQMSGAQIKI 321
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 60/187 (32%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+S+ +T +LL+ ++G +IGK G+ + R E+GA+I I + +C R ++
Sbjct: 7 ESELNATLTIRLLMHRKEVGSIIGKKGESPKRFRKESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ + S+++NS TAA
Sbjct: 60 TLTGPTNAIFKAFVMIIDKLEED-------INSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPAYQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + R+ESGA I + + +T + F+
Sbjct: 14 LTIRLLMHRKEVGSIIGKKGESPKRFRKESGARINISEGNCPERIITLTGPTNAIFK--- 70
Query: 344 SATIEAVVRLQPRCSEKIERDSGL--ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
A + + +L+ + + + T RL+VP + G LIGKGG I E+R T A
Sbjct: 71 -AFVMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAYQCGSLIGKGGCKIKEIRESTGA 129
Query: 402 NIRI 405
+++
Sbjct: 130 QVQV 133
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 127 ELRGDEDS-DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
E++G S D Q T + +P++ IGC+IG+ G + IR +GAQI+I
Sbjct: 272 EVKGYWASLDASTQTTHEFTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANP-----VE 326
Query: 186 LRSDELVQISGEASVVKKALCQIASRL 212
S V I+G A+ + A I +RL
Sbjct: 327 GSSGRQVTITGSAASISLAQYLINARL 353
>gi|345486914|ref|XP_001607400.2| PREDICTED: poly(rC)-binding protein 3-like [Nasonia vitripennis]
Length = 476
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 88/168 (52%), Gaps = 11/168 (6%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIVK+ R ++ +KI I + GS ER+VTV ++ F+
Sbjct: 29 KEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTGPTNSI--FKAFTLICK 83
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
++ + HD + G +T +L+VP+ Q G +IGKGG ++ IR TG
Sbjct: 84 KFEEWCSQFHD-IQGGGNAGGGGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTG 142
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
A I++ E LP+ R+ V ISG + + + + I + ++P +
Sbjct: 143 ASIQV-ASEMLPNSTERA---VTISGTSEAITQCIYHICCVMLESPPK 186
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 26/164 (15%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+D S ++RL+ +G +IGK G I+ + R+ESGA I + S +T +
Sbjct: 13 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTN 72
Query: 337 EFFEDTLSATIEAVVRLQPRCSE--------------KIERDSGLISFTTRLLVPTSRIG 382
F+ A + + CS+ + R T RL+VP S+ G
Sbjct: 73 SIFK----AFTLICKKFEEWCSQFHDIQGGGNAGGGGGVPRPP----ITLRLIVPASQCG 124
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
LIGKGGS I E+R +T A+I++ E LP + + V ISG
Sbjct: 125 SLIGKGGSKIKEIREVTGASIQVA-SEMLP---NSTERAVTISG 164
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + VP IGC+IGKGG+ I E+R+++ A IRI E + D + I+G+ D
Sbjct: 281 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGPTDRTITITGNPDS 338
Query: 431 AKDALIQVMTRLRANL 446
AL Q + + L
Sbjct: 339 V--ALAQYLINMSVEL 352
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + GS+IG+GG +K++R T + I++ E +P S ER VT+ S+
Sbjct: 115 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSE 167
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV+ R E+GA+I I SC R +V ++G +
Sbjct: 20 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG----SCPER---IVTVTGPTN 72
Query: 200 VVKKALCQIASRLHD 214
+ KA I + +
Sbjct: 73 SIFKAFTLICKKFEE 87
>gi|350409768|ref|XP_003488838.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Bombus
impatiens]
Length = 439
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 35/194 (18%)
Query: 23 PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
P+KR GDD R L P + GSIIG+GG+ + +LR K+ I + +
Sbjct: 66 PHKRYRQGDDE-----------LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPD-C 113
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
PG E RV+T+ S + +V + V+ L + G ++
Sbjct: 114 PGPE-RVLTISSD-----------------LPTVLQVLNEVVPN-LEENGSRHGSDEIDV 154
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
++LV Q GC+IGKGG ++ +R +TGA+I+I C +D L+ I G+ +
Sbjct: 155 RMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSH----CCPHSTDRLISICGKPNTCI 210
Query: 203 KALCQIASRLHDNP 216
+ + ++ + + +P
Sbjct: 211 ECIRELIATIKTSP 224
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
++P + LRL+ P G +IGKGG I ++R + A+I V G + ++T
Sbjct: 64 TSPHKRYRQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIV--PDCPGPERVLT 121
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+SS L ++ + + P E R G R+LV S+ GC+IGKGG I
Sbjct: 122 ISSD------LPTVLQVLNEVVPNLEENGSR-HGSDEIDVRMLVHQSQAGCIIGKGGLKI 174
Query: 393 TEMRRLTKANIRI 405
E+R T A I+I
Sbjct: 175 KELREKTGARIKI 187
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
+ T ++ +P D G +IGKGG ++ +RS++GA I I DE L + +D ++ I+G
Sbjct: 364 KTTTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI--DEPL---SGSNDRIITITGLP 418
Query: 199 SVVKKALCQIASRLHDN 215
S ++ A + +H+N
Sbjct: 419 SQIQMAQYLLQQSVHEN 435
>gi|160333253|ref|NP_001103813.1| P-element somatic inhibitor [Bombyx mori]
gi|159031799|dbj|BAF91871.1| Bombyx homolog of P-element somatic inhibitor [Bombyx mori]
Length = 703
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 164/395 (41%), Gaps = 81/395 (20%)
Query: 40 PEDTVYRYL-CPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
P+ ++ Y+ P R +G IIGRGGE + +L+ ++ KI++ G+ +R+ T+ + D
Sbjct: 98 PDQSINEYIRVPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTDGNPDRLCTLTGSRD- 156
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELR-----GDEDSDGGHQVTAKLLVPSDQIGC 153
A + + V + + R A + + G S G ++++P ++G
Sbjct: 157 --AIQRAKELV----NQIVNHRGRENAPQHQDPSEPGMNMSRPGPNAMEEIMIPGAKVGL 210
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
+IGK G+ ++ ++ +TGA++ +++D + ++ ++ISG+ + V+ A
Sbjct: 211 IIGKNGKTIKQLQEQTGAKMVVIQDGPNENSFKPQEKPLRISGDPAKVEHA--------- 261
Query: 214 DNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY-GGYKGDTAGDWSRSLY 272
+ L+ ++N PY GY G
Sbjct: 262 ------KQLVFELLANKDMQEPPR-----------------PYDDGYGG----------- 287
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-TEGDDCLI 331
S P + L++ S ++ P IG VIG G +I +I+ ++G ++ + E D L
Sbjct: 288 SDPGNGLATT--SAEVLVPKVAIGVVIGHKGKMIKKIQADTGCRVQFNQEHDEEPGDKLC 345
Query: 332 TVSSKEFFEDTLSATIEAVVRLQPRCSE-----------KIERDSGLISFTTR------- 373
+ K D IE ++ RC E + D G + + +
Sbjct: 346 YLQGKPHQLDQARQMIEDLISSVKRCEEDSRSRAVRGQGQQNGDRGGMEYGQQWPDRPEM 405
Query: 374 ---LLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+ + G +IG+GG II ++ + A+ +
Sbjct: 406 RVTFTIHGPKCGLVIGRGGEIIKQINAQSGAHCEL 440
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 82/185 (44%), Gaps = 16/185 (8%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
S P + L + + + P +G +IG+GG I +++ ESG I++ + D L T
Sbjct: 91 SGPTNLLPDQSINEYIRVPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTDGNPDRLCT 150
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGC 383
++ + +V + R + +D +++P +++G
Sbjct: 151 LTGSRDAIQRAKELVNQIVNHRGRENAPQHQDPSEPGMNMSRPGPNAMEEIMIPGAKVGL 210
Query: 384 LIGKGGSIITEMRRLTKANIRIL---PKENLPKIASEDDEMVQISGDLDLAKDALIQVMT 440
+IGK G I +++ T A + ++ P EN K ++ ++ISGD + A Q++
Sbjct: 211 IIGKNGKTIKQLQEQTGAKMVVIQDGPNENSFK---PQEKPLRISGDPAKVEHAK-QLVF 266
Query: 441 RLRAN 445
L AN
Sbjct: 267 ELLAN 271
>gi|195131533|ref|XP_002010205.1| GI15803 [Drosophila mojavensis]
gi|193908655|gb|EDW07522.1| GI15803 [Drosophila mojavensis]
Length = 596
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 175/391 (44%), Gaps = 72/391 (18%)
Query: 54 IGSIIGRGGEIVKQLRIDTKSKIRI--GETVPGSEERVVTVYSASDE-TNAFEDGDKFVS 110
+G+IIGR G ++ + +++++ + E V GS E+ +T+Y + TNA
Sbjct: 87 VGAIIGRQGTTIRTITQQSRARVDVHRKENV-GSLEKSITIYGNPENCTNAC-------- 137
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+ I E ++ + S ++ K+L ++ IG +IGK G ++ I +T
Sbjct: 138 -----------KRILEVMQQEALSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTD 186
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS 230
+I + + S L + ++ + G L +N SR+++ +++ + S
Sbjct: 187 TKITVSSINDINSFNL--ERIITVKG---------------LIENMSRAENQISTKLRQS 229
Query: 231 HSSSGSLVGPTAATPIVGIAPLM---GPYGGYKGDTAGDW----SRSLYSAPR------- 276
+ + + P + G+ P+ P G +T+ + S ++ P
Sbjct: 230 YENDLQAMAPQSLM-FPGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPAF 288
Query: 277 -DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+D+ F L P +G +IG G+ I I + S A++K+ + + D L +
Sbjct: 289 PNDMQETTF---LYIPNNAVGAIIGTKGSHIRSIMRFSSASLKI--APLDADKPLDQQTE 343
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL------ISFTTRLLVPTSRIGCLIGKGG 389
++ T+ T E + Q EK+ R+ G + T LLV +S++G +IGKGG
Sbjct: 344 RKV---TIVGTPEGQWKAQYMIFEKM-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGG 399
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDE 420
+ E++R+T + I+ LP+ L + D+E
Sbjct: 400 QNVRELQRVTGSVIK-LPEHALAPPSGGDEE 429
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T + Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 293 QETTFLYI-PNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVGT 351
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E G +D ++T +LLV S Q+G +
Sbjct: 352 PEG-------------QWKAQYMIFEKMREEGFMCGTDDV----RLTVELLVASSQVGRI 394
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLH 213
IGKGGQ V+ ++ TG+ I++ + P + V I G V+ A +I A L
Sbjct: 395 IGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSAQRRIRAMMLS 454
Query: 214 DNP 216
NP
Sbjct: 455 TNP 457
>gi|195022402|ref|XP_001985568.1| GH14429 [Drosophila grimshawi]
gi|193899050|gb|EDV97916.1| GH14429 [Drosophila grimshawi]
Length = 362
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 133/299 (44%), Gaps = 57/299 (19%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIV + R ++ +KI I + GS ER+VTV S T+A
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISD---GSCPERIVTV---SGTTSAI-------- 78
Query: 111 PAQDALFKVHDRVIAEELR--GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSE 168
A F + + E D G Q+ +L+VP+ Q G +IGK G ++ IR
Sbjct: 79 ---FAAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQN 135
Query: 169 TGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL------ 222
TG I++ E LP+ R+ V +SG A + + + QI + ++P R +
Sbjct: 136 TGCSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKP 191
Query: 223 -----LASAISNSHSSSGSLVGPT-------AATPIVGIAPLMGP--YGGYK----GDTA 264
+ A + + G+ PT A+ M P GG A
Sbjct: 192 QVTGPVILANGQAFTIQGNYAVPTQEVSKNPLASLAALGLAGMTPASTGGINHTALAALA 251
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVAN--IGGVIGKGGAIINQIRQESGAAIKVDS 321
G R+ +A R E + V+N IG +IGKGG I +IRQ SGA I++ +
Sbjct: 252 GSQLRT-ANANRAQQQQHEMT------VSNDLIGCIIGKGGTKIAEIRQISGAMIRISN 303
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 17/163 (10%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S + ++TVS
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSC--PERIVTVSG----- 73
Query: 341 DTLSATIEAVVRLQPRCSEKIER--DSGLISFT---TRLLVPTSRIGCLIGKGGSIITEM 395
T SA A + + E + D G + T RL+VP S+ G LIGK GS I E+
Sbjct: 74 -TTSAIFAAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEI 132
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
R+ T +I++ E LP + + V +SG + + Q+
Sbjct: 133 RQNTGCSIQVA-SEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ V IGC+IGKGG+ I E+R+++ A IRI E + D + ISG+ D
Sbjct: 270 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSV-- 325
Query: 434 ALIQVMTRLRANL 446
AL Q + +R ++
Sbjct: 326 ALAQYLINMRISM 338
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV R E+GA+I I D P + +V +SG S
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTS 76
Query: 200 VVKKALCQIASRLHD 214
+ A I + +
Sbjct: 77 AIFAAFTLITKKFEE 91
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSAS 96
+G R + P + GS+IG+ G +K++R +T I++ E +P S ER VT+ ++
Sbjct: 102 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQNTGCSIQVASEMLPNSTERAVTLSGSA 161
Query: 97 DE 98
++
Sbjct: 162 EQ 163
>gi|307108077|gb|EFN56318.1| hypothetical protein CHLNCDRAFT_57590 [Chlorella variabilis]
Length = 688
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 89/195 (45%), Gaps = 29/195 (14%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
V A+LLV S +G ++G+GG +++ + +GA +RIL LP+CA DE+V++ G
Sbjct: 197 VEARLLVDSSVVGFLVGRGGATIKDTMARSGAGVRILPKAELPACACLGDEVVRVVGSCE 256
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-GPYGG 258
AL +AS++ + R H + + G+L PLM G G
Sbjct: 257 AACAALRLLASQIKAHVLR--HGPPPPSPSYPGAPGAL------------PPLMLGQAGH 302
Query: 259 YKGDTA--------------GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGA 304
+ D A L P ++ E + RL+ P G +IGKGG
Sbjct: 303 HHPDVAFLHPSLAAAAFYPPPASPAGLPPPPAFSGAAVEVTFRLLAPTNRTGNIIGKGGE 362
Query: 305 IINQIRQESGAAIKV 319
+ ++R E+GA IKV
Sbjct: 363 HVRRVRTETGARIKV 377
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%)
Query: 369 SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL 428
S RLLV +S +G L+G+GG+ I + + A +RILPK LP A DE+V++ G
Sbjct: 196 SVEARLLVDSSVVGFLVGRGGATIKDTMARSGAGVRILPKAELPACACLGDEVVRVVGSC 255
Query: 429 DLAKDALIQVMTRLRANLF 447
+ A AL + ++++A++
Sbjct: 256 EAACAALRLLASQIKAHVL 274
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 34/47 (72%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEER 88
+ +R L P + G+IIG+GGE V+++R +T ++I++ + PGSEER
Sbjct: 341 EVTFRLLAPTNRTGNIIGKGGEHVRRVRTETGARIKVFDPAPGSEER 387
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 31/38 (81%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
+VT +LL P+++ G +IGKGG+ V+ +R+ETGA+I++
Sbjct: 341 EVTFRLLAPTNRTGNIIGKGGEHVRRVRTETGARIKVF 378
>gi|449450341|ref|XP_004142921.1| PREDICTED: uncharacterized protein LOC101216803 [Cucumis sativus]
gi|449494409|ref|XP_004159539.1| PREDICTED: uncharacterized LOC101216803 [Cucumis sativus]
Length = 694
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 116/232 (50%), Gaps = 30/232 (12%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV---PGSEERVVTVYSASDETNAFEDGD 106
P ++G IIG+GGE +K L++ + +KI++ + P S R+V + D+ +
Sbjct: 142 PNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSTTRMVELMGTPDQ---IAKAE 198
Query: 107 KFVSPAQDALFKVHDR---VIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
+ ++ D L + +++ L G S+ Q K +P++++G VIGKGG+ ++
Sbjct: 199 QLIN---DVLSEAESGGSGIVSRRLTGPSGSE---QFVMK--IPNNKVGLVIGKGGETIK 250
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLL 223
++++ TGA+I+++ HLP ++ +QI G + ++ A + + +N +R+
Sbjct: 251 SMQARTGARIQVIP-LHLPPGDTSTERTLQIDGSSEQIESAKQLVNEVISENRARN---- 305
Query: 224 ASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +S ++ G P ++ G P+ P GY G G YSAP
Sbjct: 306 -SGMSGGYNQQGYQARPPSSWGPPGAPPMQQPNYGY-GQQGG------YSAP 349
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 85/174 (48%), Gaps = 20/174 (11%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-------DSSSTEGDDCLIT----V 333
S ++ P +G +IGKGG I ++ +SGA I+V +S+T + + T
Sbjct: 136 SKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSTTRMVELMGTPDQIA 195
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+++ D LS + S ++ SG F + +P +++G +IGKGG I
Sbjct: 196 KAEQLINDVLSEAESGGSGI---VSRRLTGPSGSEQFV--MKIPNNKVGLVIGKGGETIK 250
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISG---DLDLAKDALIQVMTRLRA 444
M+ T A I+++P +LP + + +QI G ++ AK + +V++ RA
Sbjct: 251 SMQARTGARIQVIPL-HLPPGDTSTERTLQIDGSSEQIESAKQLVNEVISENRA 303
>gi|334188353|ref|NP_001190526.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332008916|gb|AED96299.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 198
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T YR LC K G +IG+ G I+K +R T + I + E VPG ER++ + SD
Sbjct: 68 TTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEI---SDNRRRD 124
Query: 103 EDGD-KFVSPAQDALFKVHDRVIAEE 127
DG SPAQ+ALF VHDR++ E
Sbjct: 125 PDGRMPSFSPAQEALFSVHDRILESE 150
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+ R++C A GGVIGK G II IRQ +GA I V
Sbjct: 69 TYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINV 103
>gi|255943089|ref|XP_002562313.1| Pc18g04820 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587046|emb|CAP94706.1| Pc18g04820 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 366
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 132/303 (43%), Gaps = 53/303 (17%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
D R + ++ G IIG+ G+ V LR +T K + + VPG +RV+TV T
Sbjct: 46 DLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTV------TGQ 99
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
+ + L + ++ + G ++G H V +LL+ +Q+G +IG+ G
Sbjct: 100 LRSLARAYAIVAKGLLEGAPQM---GMGGIVSNNGTHPV--RLLISHNQMGTIIGRQGLK 154
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
+++I+ +G ++ + + E LP R +V++ G ++KA+ +I L D+ R
Sbjct: 155 IKHIQDASGVRM-VAQKEMLPQSTER---IVEVQGTPEGIEKAIWEIGKCLLDDWQRGTG 210
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVGIAPLMG--PYG-GYKGDTA----------GDWS 268
+ L P + G PL P G GY+ +T+ D+S
Sbjct: 211 TV-------------LYNPAVRASLSGSQPLNNNPPAGNGYQNNTSSRQYNRTGNGADFS 257
Query: 269 RSLYSA-PRDDLSSKEFSL-----------RLVCPVANIGGVIGKGGAIINQIRQESGAA 316
Y+ D ++ + L + P +G +IG+GG I +IR+ SGA
Sbjct: 258 DGGYNRRSNSDAGNRGYPLVTEDGEEIQTQNISIPADMVGCIIGRGGTKITEIRRSSGAR 317
Query: 317 IKV 319
I +
Sbjct: 318 ISI 320
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
DG T + +P+D +GC+IG+GG + IR +GA+I I K H + + + I
Sbjct: 280 DGEEIQTQNISIPADMVGCIIGRGGTKITEIRRSSGARISIAKAPHDET----GERMFTI 335
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHL 222
G A +KAL + L +R L
Sbjct: 336 MGSAQANEKALYLLYENLEAEKTRRSQL 363
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
T + +P +GC+IG+GG+ ITE+RR + A I I
Sbjct: 286 TQNISIPADMVGCIIGRGGTKITEIRRSSGARISI 320
>gi|281366597|ref|NP_001163493.1| mushroom-body expressed, isoform E [Drosophila melanogaster]
gi|386771584|ref|NP_001246873.1| mushroom-body expressed, isoform F [Drosophila melanogaster]
gi|134085557|gb|ABO52837.1| IP17311p [Drosophila melanogaster]
gi|272455272|gb|ACZ94764.1| mushroom-body expressed, isoform E [Drosophila melanogaster]
gi|383292063|gb|AFH04544.1| mushroom-body expressed, isoform F [Drosophila melanogaster]
Length = 557
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 26/175 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETNAFED 104
R + +++GSIIG+ GEIV + R ++ +KI I + + P ER+VTV
Sbjct: 27 RLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTV------------ 71
Query: 105 GDKFVSPAQDALFKVHDRVIAE-ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
S +A+F + + E D G Q+ +L+VP+ Q G +IGK G ++
Sbjct: 72 -----SGTTNAIFSAFTLITKKFEEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIK 126
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
IR TG I++ E LP+ R+ V +SG A + + + QI + ++P R
Sbjct: 127 EIRQTTGCSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESPPR 177
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 17/161 (10%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S + ++TVS
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSC--PERIVTVSG----- 73
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTT---RLLVPTSRIGCLIGKGGSIITEMRR 397
T +A A + + E D G + T RL+VP S+ G LIGK GS I E+R+
Sbjct: 74 -TTNAIFSAFTLITKKFEEF--NDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 130
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
T +I++ E LP + + V +SG + + Q+
Sbjct: 131 TTGCSIQVA-SEMLP---NSTERAVTLSGSAEQITQCIYQI 167
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ V IGC+IGKGG+ I E+R+++ A IRI E + D + ISG+ D
Sbjct: 290 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSVAL 347
Query: 434 A--LIQVMTRL-RANLFDR 449
A LI + L +ANL ++
Sbjct: 348 AQYLINMSVELQKANLLEQ 366
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
+LR ++ Q ++ V +D IGC+IGKGG + IR +GA IRI E
Sbjct: 273 QLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGG-- 330
Query: 187 RSDELVQISGEASVVKKALCQ 207
+D + ISG V AL Q
Sbjct: 331 NTDRTITISGNPDSV--ALAQ 349
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV R E+GA+I I D P + +V +SG +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTN 76
Query: 200 VVKKALCQIASRLHD 214
+ A I + +
Sbjct: 77 AIFSAFTLITKKFEE 91
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSAS 96
+G R + P + GS+IG+ G +K++R T I++ E +P S ER VT+ ++
Sbjct: 98 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 157
Query: 97 DE 98
++
Sbjct: 158 EQ 159
>gi|386771595|ref|NP_001246876.1| mushroom-body expressed, isoform H [Drosophila melanogaster]
gi|383292067|gb|AFH04547.1| mushroom-body expressed, isoform H [Drosophila melanogaster]
Length = 433
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 20/168 (11%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIV + R ++ +KI I + GS ER+VTV S TNA ++
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISD---GSCPERIVTV---SGTTNAIFSAFTLIT 86
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+ + D G Q+ +L+VP+ Q G +IGK G ++ IR TG
Sbjct: 87 KKFEEWCSQFN---------DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
I++ E LP+ R+ V +SG A + + + QI + ++P R
Sbjct: 138 CSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESPPR 181
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S ++ ++ F
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIF- 79
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFT---TRLLVPTSRIGCLIGKGGSIITEMRR 397
SA + + CS+ D G + T RL+VP S+ G LIGK GS I E+R+
Sbjct: 80 ---SAFTLITKKFEEWCSQF--NDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
T +I++ E LP + + V +SG + + Q+
Sbjct: 135 TTGCSIQVA-SEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
+LR ++ Q ++ V +D IGC+IGKGG + IR +GA IRI E
Sbjct: 324 QLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGG-- 381
Query: 187 RSDELVQISGEASVVKKALCQIASRL 212
+D + ISG V A I R+
Sbjct: 382 NTDRTITISGNPDSVALAQYLINMRI 407
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ V IGC+IGKGG+ I E+R+++ A IRI E + D + ISG+ D
Sbjct: 341 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSV-- 396
Query: 434 ALIQVMTRLRANL 446
AL Q + +R ++
Sbjct: 397 ALAQYLINMRISM 409
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSAS 96
+G R + P + GS+IG+ G +K++R T I++ E +P S ER VT+ ++
Sbjct: 102 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 161
Query: 97 DE 98
++
Sbjct: 162 EQ 163
>gi|443685583|gb|ELT89137.1| hypothetical protein CAPTEDRAFT_171528 [Capitella teleta]
Length = 398
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 86/179 (48%), Gaps = 35/179 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSE--ERVVTVYSASDETNAFE 103
R L + G+IIG+GG +K+LR D + + TVP S ERV+TV ++ A E
Sbjct: 29 RILLQSKNAGAIIGKGGANIKRLRSDYNATV----TVPDSSGPERVLTV--GANLGTALE 82
Query: 104 ---DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
D V P+ + + D E+R L+ Q GCVIG+GG
Sbjct: 83 ILLD----VIPSLEDYKRFKDLEFECEMR--------------WLIHQSQAGCVIGRGGN 124
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKALCQIASRLHDNPSR 218
++ +R ETGAQI++ CA +S E +VQ++G+ VV +L I L P +
Sbjct: 125 KIKELRDETGAQIKVYS-----QCAPQSSERIVQLTGKPRVVVNSLATIFDLLQTAPPK 178
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
LR++ N G +IGKGGA I ++R + A + V SS G + ++TV + L
Sbjct: 28 LRILLQSKNAGAIIGKGGANIKRLRSDYNATVTVPDSS--GPERVLTVGA------NLGT 79
Query: 346 TIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+E ++ + P + R L+ S+ GC+IG+GG+ I E+R T A I++
Sbjct: 80 ALEILLDVIPSLEDYKRFKDLEFECEMRWLIHQSQAGCVIGRGGNKIKELRDETGAQIKV 139
Query: 406 LPKENLPKIASEDDE-MVQISGDLDLAKDALIQVMTRLR 443
+ A + E +VQ++G + ++L + L+
Sbjct: 140 -----YSQCAPQSSERIVQLTGKPRVVVNSLATIFDLLQ 173
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 296 GGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
G +IGKGG+ I QIRQESGA I +D D +IT++ +
Sbjct: 336 GAIIGKGGSRIRQIRQESGAGINIDEPMQGSQDRIITITGSQ 377
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 32/44 (72%)
Query: 55 GSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
G+IIG+GG ++Q+R ++ + I I E + GS++R++T+ + D+
Sbjct: 336 GAIIGKGGSRIRQIRQESGAGINIDEPMQGSQDRIITITGSQDQ 379
>gi|431921619|gb|ELK18971.1| Poly(rC)-binding protein 2 [Pteropus alecto]
Length = 446
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 131/314 (41%), Gaps = 59/314 (18%)
Query: 59 GRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFK 118
G+ GE VK++R ++ ++I I E ER++T+ ++ A+FK
Sbjct: 22 GKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-----------------AIFK 62
Query: 119 VHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
+I ++L D S + VT +L+VP+ Q G +IGKGG ++ IR TGA
Sbjct: 63 AFAMII-DKLEEDISSSMTNSTAASKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 121
Query: 172 QIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR---------LHDNPSRSQHL 222
Q+++ D LP+ R+ + I K +C + PS S +
Sbjct: 122 QVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVI 180
Query: 223 LAS----------AISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLY 272
A + S H++ + P P + + G Y + D ++
Sbjct: 181 FAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQ 240
Query: 273 SA--PRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
+ P D S++ S L P IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 241 QSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA 300
Query: 321 SSSTEGDDCLITVS 334
+ D +T++
Sbjct: 301 NPVEGSTDRQVTIT 314
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 22/116 (18%)
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSE 359
GK G + ++R+ESGA I + +EG+ C + TL+ A+ + +
Sbjct: 22 GKKGESVKKMREESGARINI----SEGN-CPERI-------ITLAGPTNAIFKAFAMIID 69
Query: 360 KIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
K+E D S + + T RL+VP S+ G LIGKGG I E+R T A +++
Sbjct: 70 KLEEDISSSMTNSTAASKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 125
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I +D V
Sbjct: 258 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVT 312
Query: 194 ISGEASVVKKALCQIASRLHDNPSRSQ 220
I+G A+ + A I L + SQ
Sbjct: 313 ITGSAASISLAQYLINVSLENAKPSSQ 339
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTV 92
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 93 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITI 140
>gi|327274617|ref|XP_003222073.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Anolis carolinensis]
Length = 584
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 182/404 (45%), Gaps = 77/404 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNAFED 104
R L P + +G+IIG+ G ++ + T+SKI I + G+ E+ +T++S + ++
Sbjct: 200 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCSS--- 256
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++I E ++ + +D+ ++ K+L ++ +G +IGK G+ ++
Sbjct: 257 ---------------ACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLK 301
Query: 164 NIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPSR 218
I +T +I I L+D L + + + G KA +I ++ ++N
Sbjct: 302 KIEQDTDTKITISPLQDLTL----YNPERTITVKGSIETCAKAEEEIMKKIRESYENDIA 357
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPI---VGIAPLMG-----PYGGYKGDTAGDWSRS 270
+ +L A I + ++ L P+++ VG+A P+G
Sbjct: 358 AMNLQAHLIPGLNLNALGLFPPSSSGIPPPSVGVASAASASSYPPFG------------- 404
Query: 271 LYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCL 330
P + ++ L P +G +IGK G I Q+ + +GA+IK+ + EG +
Sbjct: 405 --QQPESE------TVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPEAK 454
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLI 385
+ + ++ EA + Q R K++ ++ + + VP+ G +I
Sbjct: 455 LRMV-------IITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVI 507
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
GKGG + E++ LT A + ++P++ P E+D+ +V+I+G
Sbjct: 508 GKGGKTVNELQNLTSAEV-VVPRDQTP---DENDQVVVKITGHF 547
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 33/177 (18%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
PE P +G+IIG+ G+ +KQL + I+I G E ++ V
Sbjct: 407 PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIA-PAEGPEAKLRMV------- 458
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIA----EELRGDEDSDGGHQVTAKLLVPSDQIGCVI 155
++ +A FK R+ E G ++ ++ A + VPS G VI
Sbjct: 459 --------IITGPPEAQFKAQGRIYGKLKEENFFGPKEEV---KLEAHIKVPSYAAGRVI 507
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKALCQIASR 211
GKGG+ V +++ T A++ + +D+ +D+ +V+I+G CQ+A R
Sbjct: 508 GKGGKTVNELQNLTSAEVVVPRDQ----TPDENDQVVVKITGHFYA-----CQLAQR 555
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 73/165 (44%), Gaps = 15/165 (9%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E LR++ P +G +IGK GA I I +++ + I + G + K T
Sbjct: 196 EVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAG------AAEKPI---T 246
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLISFTT----RLLVPTSRIGCLIGKGGSIITEMRRL 398
+ +T E E +++++ FT ++L + +G LIGK G + ++ +
Sbjct: 247 IHSTPEGCSSACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQD 306
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
T I I P ++L + + + G ++ A ++M ++R
Sbjct: 307 TDTKITISPLQDL--TLYNPERTITVKGSIETCAKAEEEIMKKIR 349
>gi|326378263|gb|ADZ57231.1| neuro-oncological ventral antigen [Branchiostoma floridae]
Length = 511
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 99/187 (52%), Gaps = 23/187 (12%)
Query: 39 GPED--TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVY 93
GPED + + L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ER+V +
Sbjct: 60 GPEDGQLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVIT 119
Query: 94 SASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGC 153
+ D + + KF+ + + +E+ + +++ QV K++VP+ G
Sbjct: 120 GSED---SLKSVHKFLMEKISQAPQPPAKSPSEQ---NANNNRAKQV--KIVVPNSTAGL 171
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDE----HLPSCALRSDELVQISGEASVVKKALCQIA 209
+IGKGG ++ I +TG++++I + +LP + ++ I+GE KA I
Sbjct: 172 IIGKGGATIKFIMEQTGSRVQISQKATNGINLP------ERVITITGEPEQNDKACAFIV 225
Query: 210 SRLHDNP 216
+++ ++P
Sbjct: 226 NKIVEDP 232
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS----TEGDDCLITVSSKEFFED 341
L+++ P G +IGKGG I Q+++E+GA IK+ S+ + ++ S++ +
Sbjct: 68 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGSEDSLKS 127
Query: 342 TLSATIEAVVRL-QPRCSEKIERDSGLI-SFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
+E + + QP E+++ + +++VP S G +IGKGG+ I + T
Sbjct: 128 VHKFLMEKISQAPQPPAKSPSEQNANNNRAKQVKIVVPNSTAGLIIGKGGATIKFIMEQT 187
Query: 400 KANIRILPKE----NLPK 413
+ ++I K NLP+
Sbjct: 188 GSRVQISQKATNGINLPE 205
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 130 GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILK-DEHLPSCALRS 188
G ED Q+ K+L+PS G +IGKGGQ + ++ ETGA I++ K ++ P R
Sbjct: 60 GPEDG----QLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTER- 114
Query: 189 DELVQISGEASVVK---KALCQIASRLHDNPSRS 219
+V I+G +K K L + S+ P++S
Sbjct: 115 --IVVITGSEDSLKSVHKFLMEKISQAPQPPAKS 146
>gi|326378247|gb|ADZ57223.1| neuro-oncological ventral antigen [Branchiostoma lanceolatum]
Length = 508
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 99/187 (52%), Gaps = 23/187 (12%)
Query: 39 GPED--TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVY 93
GPED + + L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ER+V +
Sbjct: 60 GPEDGQLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVIT 119
Query: 94 SASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGC 153
+ D + + KF+ + + +E+ + +++ QV K++VP+ G
Sbjct: 120 GSED---SLKSVHKFLMEKIGQAPRPPAKSPSEQ---NANNNRAKQV--KIVVPNSTAGL 171
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDE----HLPSCALRSDELVQISGEASVVKKALCQIA 209
+IGKGG ++ I +TG++++I + +LP + ++ I+GE KA I
Sbjct: 172 IIGKGGATIKFIMEQTGSRVQISQKATSGINLP------ERVITITGEPEQNDKACAFIV 225
Query: 210 SRLHDNP 216
+++ ++P
Sbjct: 226 NKIVEDP 232
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 93/222 (41%), Gaps = 61/222 (27%)
Query: 130 GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILK-DEHLPSCALRS 188
G ED Q+ K+L+PS G +IGKGGQ + ++ ETGA I++ K ++ P +
Sbjct: 60 GPEDG----QLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGT---T 112
Query: 189 DELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVG 248
+ +V I+G +K + ++ P P A +P
Sbjct: 113 ERIVVITGSEDSLKSVHKFLMEKIGQAPR----------------------PPAKSP--- 147
Query: 249 IAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQ 308
+ ++ +++ +++V P + G +IGKGGA I
Sbjct: 148 -------------------------SEQNANNNRAKQVKIVVPNSTAGLIIGKGGATIKF 182
Query: 309 IRQESGAAIKVDSSSTEGDDC---LITVSSKEFFEDTLSATI 347
I +++G+ +++ +T G + +IT++ + D A I
Sbjct: 183 IMEQTGSRVQISQKATSGINLPERVITITGEPEQNDKACAFI 224
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 10/138 (7%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS----TEGDDCLITVSSKEFFED 341
L+++ P G +IGKGG I Q+++E+GA IK+ S+ + ++ S++ +
Sbjct: 68 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGSEDSLKS 127
Query: 342 TLSATIEAVVRL--QPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
+E + + P S + + + +++VP S G +IGKGG+ I + T
Sbjct: 128 VHKFLMEKIGQAPRPPAKSPSEQNANNNRAKQVKIVVPNSTAGLIIGKGGATIKFIMEQT 187
Query: 400 KANIRILPKE----NLPK 413
+ ++I K NLP+
Sbjct: 188 GSRVQISQKATSGINLPE 205
>gi|46125203|ref|XP_387155.1| hypothetical protein FG06979.1 [Gibberella zeae PH-1]
Length = 372
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 135/294 (45%), Gaps = 38/294 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + ++ G IIG+GG+ V LR +T K + + V G +RV+T+ D A
Sbjct: 50 RAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCD---AISRA 106
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
V+ A + + A + G S+G H + KLL+ +Q+G +IG+ G +++I
Sbjct: 107 YAIVARA------LLEGAPAMGMGGVVQSNGTHPI--KLLISHNQMGTIIGRQGLKIKHI 158
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR-SQHLLA 224
+ +G ++ + + E LP R +V++ G +++A+ +I L D+ R + +L
Sbjct: 159 QDASGVRM-VAQKEMLPQSTER---IVEVQGTPEGIQRAIWEICKCLVDDWQRGTGTVLY 214
Query: 225 SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGG----YKGDTAGDWSR----------- 269
+ + + SSG G T+ YGG + D+S
Sbjct: 215 NPVVRTQPSSG---GNTSGGAGFNQGSGRSDYGGSPRVMRTGNGADFSNGSSRPYNRRSD 271
Query: 270 ---SLYSAPRDDLSSKEFSLRLVC-PVANIGGVIGKGGAIINQIRQESGAAIKV 319
+L P D + +E + + P +G +IG+ G+ I++IR+ SGA I +
Sbjct: 272 SDAALRGPPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISI 325
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 128 LRG--DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
LRG D +G T + +P+D +GC+IG+ G + IR +GA+I I K H +
Sbjct: 276 LRGPPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDET-- 333
Query: 186 LRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
+ + I G A + AL + L R L
Sbjct: 334 --GERMFTIMGTAKANESALFLLYENLEAEKMRRSQL 368
>gi|449277028|gb|EMC85335.1| Insulin-like growth factor 2 mRNA-binding protein 1, partial
[Columba livia]
Length = 519
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 169/387 (43%), Gaps = 65/387 (16%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++++S +
Sbjct: 137 PVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPEG 196
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGK 157
+A ++I E ++ + +D+ +V K+L ++ +G +IGK
Sbjct: 197 CSAA------------------CKMILEIMQKEAKDTKTADEVPLKILAHNNFVGRLIGK 238
Query: 158 GGQIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL--- 212
G+ ++ + +T +I I L+D L + + + G +A +I ++
Sbjct: 239 EGRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGSIENCCRAEQEIMKKVREA 294
Query: 213 HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG--PYGGYKGDTAGDWSRS 270
++N + L + I + ++ L +++ + + G PY +
Sbjct: 295 YENDVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVSGAAPYSSF----------- 343
Query: 271 LYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCL 330
+ ++ ++ + P +G +IGK G I Q+ + + A+IK+ T
Sbjct: 344 --------MPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVR 395
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLI 385
+ V ++ EA + Q R K++ ++ + T + VP S G +I
Sbjct: 396 MVV---------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVI 446
Query: 386 GKGGSIITEMRRLTKANIRILPKENLP 412
GKGG + E++ LT A + ++P++ P
Sbjct: 447 GKGGKTVNELQNLTAAEV-VVPRDQTP 472
>gi|71997385|ref|NP_001023001.1| Protein ZK418.9, isoform b [Caenorhabditis elegans]
gi|373218579|emb|CCD61630.1| Protein ZK418.9, isoform b [Caenorhabditis elegans]
Length = 510
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 163/387 (42%), Gaps = 66/387 (17%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGD 106
Y P + +G +IG+GG S+IR+ + G V + N F +
Sbjct: 11 YPVPEKVVGLVIGKGG-----------SEIRLIQQTSGCR---VQMDPDHQSVNGFRNCT 56
Query: 107 KFVSPAQDALFK-VHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
P Q A+ + + +VI G + +VT ++L+P+D+IG VIGKGG+ ++ +
Sbjct: 57 IEGPPDQVAVARQMITQVINRNQTGAQPGAAPGEVTEEMLIPADKIGLVIGKGGETIRIV 116
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
+ ++G LR+ +VQ + A+ K L I S +++ L+ +
Sbjct: 117 QEQSG---------------LRNCNVVQETTTATGQPKPLRMIGSPAAIETAKA--LVHN 159
Query: 226 AISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFS 285
++N+ ++ P++ AP P G + G Y A +
Sbjct: 160 IMNNTQGNA----------PLLQRAPHQ-PSGQFGGG---------YGA-----QEAQAK 194
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAI--KVDSSSTEGDDCLITVSSKEFFEDTL 343
++ P + G +IGKGG +I ++ E+G I K D++ D + + +++
Sbjct: 195 GEVIVPRLSAGMIIGKGGEMIKRLAAETGTKIQFKPDTNPNSEDRIAVIMGTRDQIYRAT 254
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTTR----LLVPTSRIGCLIGKGGSIITEMRRLT 399
E V R +R S + + VP + G +IGKGG I ++ R T
Sbjct: 255 ERITEIVNRAIKNNGAPQDRGSAGTVLPGQSIFYMHVPAGKCGLVIGKGGENIKQIERET 314
Query: 400 KANIRILPKENLPKIASEDDEMVQISG 426
A + P + +ED+++ +I G
Sbjct: 315 GATCGLAPAA---EQKNEDEKVFEIKG 338
>gi|395839833|ref|XP_003792780.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 5 [Otolemur garnettii]
Length = 441
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 133/300 (44%), Gaps = 39/300 (13%)
Query: 132 EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
E++ ++ K+L + +G +IGK G+ ++ I ETG +I I + L +
Sbjct: 131 EEAKIAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNPERT 188
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGI-- 249
+ + G A +I +L + + +LA + +L+ P +GI
Sbjct: 189 ITVKGTVEACANAEIEIMKKLRE--AFENDMLAV------NQQANLI-PGLNLSALGIFS 239
Query: 250 --APLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
++ P G +G P ++ + L P +G +IGK GA I
Sbjct: 240 TGLSVLPPPSGPRGAPPAAPYHPFAQYPEQEI------VNLFIPTQAVGAIIGKKGAHIK 293
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL 367
Q+ + +GA+IK+ + EG D VS + ++ EA + Q R K++ ++
Sbjct: 294 QLARFAGASIKI--APAEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFF 344
Query: 368 -----ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+ + VP+S G +IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 345 NPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 400
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 17/145 (11%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYS 94
F PE + P + +G+IIG+ G +KQL + I+I P ER+V + +
Sbjct: 263 FAQYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-T 321
Query: 95 ASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
E G F ++ F + V ++ A + VPS G V
Sbjct: 322 GPPEAQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRV 366
Query: 155 IGKGGQIVQNIRSETGAQIRILKDE 179
IGKGG+ V +++ T A++ + +D+
Sbjct: 367 IGKGGKTVNELQNLTSAEVIVPRDQ 391
>gi|147818796|emb|CAN67284.1| hypothetical protein VITISV_021596 [Vitis vinifera]
Length = 332
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV---PGSEERVVTVYSA 95
G + T + P ++G IIG+GGE +K L++ + +KI++ + P S R+V +
Sbjct: 93 GYQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGT 152
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVI 155
D+ ++ ++ +++ L G G Q K VP++++G +I
Sbjct: 153 PDQ---IAKAEQLINDVLSEAEAGGSGIVSRRLTGQA---GSEQFVMK--VPNNKVGLII 204
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
GKGG+ ++N+++ TGA+I+++ HLP + VQI G + ++ A
Sbjct: 205 GKGGETIKNMQARTGARIQVIP-LHLPPGDTSMERTVQIDGTSEQIESA 252
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 17/153 (11%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD-------SSSTEGDDCLIT----V 333
S ++ P +G +IGKGG I ++ +SGA I+V +S T + + T
Sbjct: 98 SKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQIA 157
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+++ D LS EA S ++ +G F + VP +++G +IGKGG I
Sbjct: 158 KAEQLINDVLS---EAEAGGSGIVSRRLTGQAGSEQFVMK--VPNNKVGLIIGKGGETIK 212
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
M+ T A I+++P +LP + + VQI G
Sbjct: 213 NMQARTGARIQVIPL-HLPPGDTSMERTVQIDG 244
>gi|393220213|gb|EJD05699.1| hypothetical protein FOMMEDRAFT_79532 [Fomitiporia mediterranea
MF3/22]
Length = 281
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 93/188 (49%), Gaps = 20/188 (10%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASD 97
G +++ P ++GSIIG+ G +K+++ + +++ E +PGS ERV++V +D
Sbjct: 81 GSRAVTIKFMIPNSRMGSIIGKQGAKIKEIQDASGARLNASEGMLPGSTERVLSVAGVAD 140
Query: 98 ET--------NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSD 149
N + + + + ++ ++ +R L G G T ++ +P+D
Sbjct: 141 AIHIATYYVGNILIECQERMPSSTNSSYRPSNRAPRPPLSG-----GAQSYTQQIYIPND 195
Query: 150 QIGCVIGKGGQIVQNIRSETGAQIRILKDEHL------PSCALRSDELVQISGEASVVKK 203
+GC+IGKGG + IR + +QI+I++ P+ ++ LV I+G+ ++
Sbjct: 196 LVGCIIGKGGSKINEIRHMSASQIKIMEPGVTPPGMSGPAGGTENERLVIITGQPHNIQM 255
Query: 204 ALCQIASR 211
A+ + R
Sbjct: 256 AVQLLYHR 263
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 116/265 (43%), Gaps = 61/265 (23%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIGR G+ V ++R + +++ + E++PG+ ER++ V D A
Sbjct: 16 IIGRAGKHVNEIREKSGARVVVSESIPGNPERILNVSGPLD--------------AVSKA 61
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT K ++P+ ++G +IGK G ++ I+ +GA++
Sbjct: 62 FGLIVRRINDEPFDVPSVPGSRAVTIKFMIPNSRMGSIIGKQGAKIKEIQDASGARLN-A 120
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
+ LP ++ ++ ++G A + A + + L + Q + S+ ++S+ S
Sbjct: 121 SEGMLPGS---TERVLSVAGVADAIHIATYYVGNILIE----CQERMPSSTNSSYRPSN- 172
Query: 237 LVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS--SKEFSLRLVCPVAN 294
APR LS ++ ++ ++ P
Sbjct: 173 ------------------------------------RAPRPPLSGGAQSYTQQIYIPNDL 196
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
+G +IGKGG+ IN+IR S + IK+
Sbjct: 197 VGCIIGKGGSKINEIRHMSASQIKI 221
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 81/171 (47%), Gaps = 27/171 (15%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFF 339
S+ +++ + P + +G +IGK GA I +I+ SGA + G + +++V+
Sbjct: 82 SRAVTIKFMIPNSRMGSIIGKQGAKIKEIQDASGARLNASEGMLPGSTERVLSVAG---V 138
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDS-----------------GLISFTTRLLVPTSRIG 382
D + V + C E++ + G S+T ++ +P +G
Sbjct: 139 ADAIHIATYYVGNILIECQERMPSSTNSSYRPSNRAPRPPLSGGAQSYTQQIYIPNDLVG 198
Query: 383 CLIGKGGSIITEMRRLTKANIRIL------PKENLPKIASEDDEMVQISGD 427
C+IGKGGS I E+R ++ + I+I+ P + P +E++ +V I+G
Sbjct: 199 CIIGKGGSKINEIRHMSASQIKIMEPGVTPPGMSGPAGGTENERLVIITGQ 249
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IG+ G +N+IR++SGA + V S + ++ VS D +S +VR
Sbjct: 16 IIGRAGKHVNEIREKSGARVVVSESIPGNPERILNVSGP---LDAVSKAFGLIVRRINDE 72
Query: 358 SEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
+ G + T + ++P SR+G +IGK G+ I E++ + A +
Sbjct: 73 PFDVPSVPGSRAVTIKFMIPNSRMGSIIGKQGAKIKEIQDASGARL 118
>gi|71997383|ref|NP_001023000.1| Protein ZK418.9, isoform a [Caenorhabditis elegans]
gi|373218578|emb|CCD61629.1| Protein ZK418.9, isoform a [Caenorhabditis elegans]
Length = 557
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 163/387 (42%), Gaps = 66/387 (17%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGD 106
Y P + +G +IG+GG S+IR+ + G V + N F +
Sbjct: 58 YPVPEKVVGLVIGKGG-----------SEIRLIQQTSGCR---VQMDPDHQSVNGFRNCT 103
Query: 107 KFVSPAQDALFK-VHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
P Q A+ + + +VI G + +VT ++L+P+D+IG VIGKGG+ ++ +
Sbjct: 104 IEGPPDQVAVARQMITQVINRNQTGAQPGAAPGEVTEEMLIPADKIGLVIGKGGETIRIV 163
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
+ ++G LR+ +VQ + A+ K L I S +++ L+ +
Sbjct: 164 QEQSG---------------LRNCNVVQETTTATGQPKPLRMIGSPAAIETAKA--LVHN 206
Query: 226 AISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFS 285
++N+ ++ P++ AP P G + G Y A +
Sbjct: 207 IMNNTQGNA----------PLLQRAPHQ-PSGQFGGG---------YGA-----QEAQAK 241
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAI--KVDSSSTEGDDCLITVSSKEFFEDTL 343
++ P + G +IGKGG +I ++ E+G I K D++ D + + +++
Sbjct: 242 GEVIVPRLSAGMIIGKGGEMIKRLAAETGTKIQFKPDTNPNSEDRIAVIMGTRDQIYRAT 301
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTTR----LLVPTSRIGCLIGKGGSIITEMRRLT 399
E V R +R S + + VP + G +IGKGG I ++ R T
Sbjct: 302 ERITEIVNRAIKNNGAPQDRGSAGTVLPGQSIFYMHVPAGKCGLVIGKGGENIKQIERET 361
Query: 400 KANIRILPKENLPKIASEDDEMVQISG 426
A + P + +ED+++ +I G
Sbjct: 362 GATCGLAPAA---EQKNEDEKVFEIKG 385
>gi|326510613|dbj|BAJ87523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528939|dbj|BAJ97491.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 360
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 10/187 (5%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS---TEGDDC 329
+A +D K LR + G +IGKGG+ IN + +SGA I++ S +D
Sbjct: 38 AADHEDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDR 97
Query: 330 LITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGG 389
+I VS F++ + A +E V L+ SE E + RL+VP S G +IGKGG
Sbjct: 98 IIMVSG--LFDEVVKA-MELV--LEKLLSEGEESNEAEARPKFRLVVPNSSCGGIIGKGG 152
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+ I + A I+I P++N D +V I+G L+ A+ ++++L ++
Sbjct: 153 ATIKSFIEDSHAGIKISPQDN--NFVGLHDRLVTITGPLNSQMRAIHLILSKLSEDVHYP 210
Query: 450 EGAVSTF 456
S F
Sbjct: 211 PNLSSPF 217
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 144/319 (45%), Gaps = 50/319 (15%)
Query: 19 ADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
ADH P DD+++ T R+L G IIG+GG + + + ++I++
Sbjct: 33 ADHDPAADHE--DDKEK------PTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQL 84
Query: 79 G---ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E PG+ +R++ V DE A+ V +++++E G+E ++
Sbjct: 85 SRSHEFFPGTNDRIIMVSGLFDEV-------------VKAMELVLEKLLSE---GEESNE 128
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
+ +L+VP+ G +IGKGG +++ ++ A I+I ++ + D LV I+
Sbjct: 129 AEARPKFRLVVPNSSCGGIIGKGGATIKSFIEDSHAGIKISPQDN--NFVGLHDRLVTIT 186
Query: 196 GEASVVKKALCQIASRL----HDNPSRSQHLLASAIS-NSHSSS---GSLVGPTAATPIV 247
G + +A+ I S+L H P+ S + + S+ ++ G ++ P V
Sbjct: 187 GPLNSQMRAIHLILSKLSEDVHYPPNLSSPFPYAGLGFPSYPAAVPVGYMIPPVPYNNTV 246
Query: 248 GIAP--LMGPYGG-----YKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIG 300
P P GG Y+ + G RS P ++ + + ++ + +IG V+G
Sbjct: 247 NYGPNGYAAPGGGGGGGRYQNNKPGTPVRS----PANNDAQESHTIGVAD--EHIGAVVG 300
Query: 301 KGGAIINQIRQESGAAIKV 319
+ G I +I Q SGA IK+
Sbjct: 301 RAGRNITEIIQASGARIKI 319
>gi|357137683|ref|XP_003570429.1| PREDICTED: RNA-binding protein Nova-1-like [Brachypodium
distachyon]
Length = 349
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 145/339 (42%), Gaps = 42/339 (12%)
Query: 40 PED-----TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVT 91
PED T R+L G IIG+GG + + + ++I++ E PG+ +R++
Sbjct: 38 PEDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIM 97
Query: 92 VYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQI 151
V DE A+ V ++++AE G+E ++ + +L+VP+
Sbjct: 98 VSGLFDEV-------------IKAMELVLEKLLAE---GEEFNEAEARPKFRLVVPNSSC 141
Query: 152 GCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR 211
G +IGKGG ++ ++ A I+I ++ + D LV I+G + +A+ I S+
Sbjct: 142 GGIIGKGGATIKAFIEDSHAGIKISPQDN--NFVGLHDRLVTITGPFNNQMRAIYLILSK 199
Query: 212 L----HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGP--YGG-YKGDTA 264
L H P+ S + + + VG A GP YGG Y+ +
Sbjct: 200 LSEDVHYPPNLSSPFPYAGLGFPSYPAPVPVGYMIPQVPYNNAVNYGPNGYGGRYQNNKP 259
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
G RS P + + + ++ + +IG V+G+ G I +I Q SGA IK+ S
Sbjct: 260 GTPVRS----PATNDAQESHTIGVAD--EHIGAVVGRAGRNITEIIQASGARIKI---SD 310
Query: 325 EGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIER 363
GD T K T A A + R S ER
Sbjct: 311 RGDFIAGTSDRKVTITGTPEAIQAAESMIMQRVSASSER 349
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 11/185 (5%)
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS---TEGDDCLI 331
P DD K LR + G +IGKGG+ IN + +SGA I++ S +D +I
Sbjct: 38 PEDD-KEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRII 96
Query: 332 TVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSI 391
VS F++ + A +E V L+ +E E + RL+VP S G +IGKGG+
Sbjct: 97 MVSG--LFDEVIKA-MELV--LEKLLAEGEEFNEAEARPKFRLVVPNSSCGGIIGKGGAT 151
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREG 451
I + A I+I P++N D +V I+G + A+ ++++L ++
Sbjct: 152 IKAFIEDSHAGIKISPQDN--NFVGLHDRLVTITGPFNNQMRAIYLILSKLSEDVHYPPN 209
Query: 452 AVSTF 456
S F
Sbjct: 210 LSSPF 214
>gi|386771590|ref|NP_001246875.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
gi|383292065|gb|AFH04546.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
Length = 573
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 20/174 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R + +++GSIIG+ GEIV + R ++ +KI I + GS ER+VTV S TNA
Sbjct: 27 RLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD---GSCPERIVTV---SGTTNAIFS 80
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ + + D G Q+ +L+VP+ Q G +IGK G ++
Sbjct: 81 AFTLITKKFEEWCSQFN---------DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKE 131
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
IR TG I++ E LP+ R+ V +SG A + + + QI + ++P R
Sbjct: 132 IRQTTGCSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESPPR 181
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S ++ ++ F
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIF- 79
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTT---RLLVPTSRIGCLIGKGGSIITEMRR 397
SA + + CS+ D G + T RL+VP S+ G LIGK GS I E+R+
Sbjct: 80 ---SAFTLITKKFEEWCSQF--NDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
T +I++ E LP + + V +SG + + Q+
Sbjct: 135 TTGCSIQVA-SEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ V IGC+IGKGG+ I E+R+++ A IRI E + D + ISG+ D
Sbjct: 306 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSVAL 363
Query: 434 A--LIQVMTRL-RANLFDR 449
A LI + L +ANL ++
Sbjct: 364 AQYLINMSVELQKANLLEQ 382
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSAS 96
+G R + P + GS+IG+ G +K++R T I++ E +P S ER VT+ ++
Sbjct: 102 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 161
Query: 97 DE 98
++
Sbjct: 162 EQ 163
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV R E+GA+I I SC R +V +SG +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG----SCPER---IVTVSGTTN 76
Query: 200 VVKKALCQIASRLHD 214
+ A I + +
Sbjct: 77 AIFSAFTLITKKFEE 91
>gi|410951301|ref|XP_003982336.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Felis catus]
Length = 360
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 124/289 (42%), Gaps = 77/289 (26%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L +A +N
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN--------------------- 93
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
G+ SR +LRLV P + G +IGK G I +IR
Sbjct: 94 -------------GGNVSR------------PPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QES--GAAIKVDSSSTEGDDCLITVSSKEFFE---DTLSATIEAVVRLQ-------PRCS 358
+ GA I S + G + +S+ + F + T V +LQ P S
Sbjct: 129 ESPPKGATIPYHPSLSLGT---VLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFAS 185
Query: 359 EKIER--DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+ D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 186 PSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 234
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 124/292 (42%), Gaps = 66/292 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVFH 74
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 75 AVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 165 IRSET--GAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
IR GA I L + L +++ + G+ V A ++ Q L
Sbjct: 127 IRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEV----------TKLQQL 176
Query: 223 LASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSK 282
A+ + +P M P G P SS+
Sbjct: 177 SGHAVPFA-------------------SPSMVP--GLD--------------PGTQTSSQ 201
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T++
Sbjct: 202 EF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 249
>gi|301767224|ref|XP_002919001.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Ailuropoda
melanoleuca]
Length = 360
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 124/289 (42%), Gaps = 77/289 (26%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L +A +N
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN--------------------- 93
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
G+ SR +LRLV P + G +IGK G I +IR
Sbjct: 94 -------------GGNVSR------------PPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QES--GAAIKVDSSSTEGDDCLITVSSKEFFE---DTLSATIEAVVRLQ-------PRCS 358
+ GA I S + G + +S+ + F + T V +LQ P S
Sbjct: 129 ESPPKGATIPYHPSLSLGT---VLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFAS 185
Query: 359 EKIER--DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+ D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 186 PSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 234
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 123/292 (42%), Gaps = 66/292 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVFH 74
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 75 AVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 165 IRSET--GAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
IR GA I L + L +++ + G+ V A ++ Q L
Sbjct: 127 IRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEV----------TKLQQL 176
Query: 223 LASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSK 282
A+ + S + P A T SS+
Sbjct: 177 SGHAVPFASPSMVPGLDPGAQT-----------------------------------SSQ 201
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T++
Sbjct: 202 EF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 249
>gi|384248088|gb|EIE21573.1| hypothetical protein COCSUDRAFT_17393 [Coccomyxa subellipsoidea
C-169]
Length = 311
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 151/339 (44%), Gaps = 65/339 (19%)
Query: 34 DQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKI---RIGETVPGSEERVV 90
D+ G + + ++L GSIIG+GG + +L+ + +++ R E PG++ERV+
Sbjct: 33 DEGTAGEQKVIAKFLMSNAAAGSIIGKGGANISELQSQSGARLQLSRASEFFPGTQERVM 92
Query: 91 TVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDED--SDGGHQVTAKLLVPS 148
AS N L +H +I +++G++ + G +LLVP+
Sbjct: 93 L---ASGSVN-------------QVLTALH--LILTKIQGEQSMMARDGKSTQLRLLVPT 134
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI 208
G +IGKGG +++ ++ A I + + P D +V+I+G + +A+ +
Sbjct: 135 PLCGAIIGKGGATIRSFAEDSRAAITVSPQDKQPLGI--PDRVVRITGAQDQLLRAVALL 192
Query: 209 ASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWS 268
++L ++P+ ++ + S+ S GP + G +
Sbjct: 193 LTKLVESPNYTR------FTTSNVS-------------------YGPPPQHMG-----YQ 222
Query: 269 RSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ Y P+ + + + P A +G +IGKGG +I+Q++ G I++ ++ DD
Sbjct: 223 QKGYMQPQQQ---QRMEVTVPVPEARVGAIIGKGGEVISQLKSVIGVKIRI----SDRDD 275
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL 367
+ +++ T+S +AV Q +KI + + L
Sbjct: 276 FVPGTRNRKV---TISGAADAVQIAQVLIHQKINQAATL 311
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 143/371 (38%), Gaps = 111/371 (29%)
Query: 112 AQDALFKVHDRVIAE----ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRS 167
A+ A +V D AE E DE + G +V AK L+ + G +IGKGG + ++S
Sbjct: 10 AKLADLEVKDDAPAEVEEKEPGADEGTAGEQKVIAKFLMSNAAAGSIIGKGGANISELQS 69
Query: 168 ETGAQIRILK-DEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASA 226
++GA++++ + E P R ++ SG + V AL HL+ +
Sbjct: 70 QSGARLQLSRASEFFPGTQER---VMLASGSVNQVLTAL---------------HLILTK 111
Query: 227 ISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSL 286
I S +M RD S++ L
Sbjct: 112 IQGEQS-------------------MMA---------------------RDGKSTQ---L 128
Query: 287 RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-------------TEGDDCLI-- 331
RL+ P G +IGKGGA I ++S AAI V T D L+
Sbjct: 129 RLLVPTPLCGAIIGKGGATIRSFAEDSRAAITVSPQDKQPLGIPDRVVRITGAQDQLLRA 188
Query: 332 -------TVSSKEFFEDTLSAT----------IEAVVRLQPRCSEKIERDSGLISFTTRL 374
V S + T S + +QP+ +++E +
Sbjct: 189 VALLLTKLVESPNYTRFTTSNVSYGPPPQHMGYQQKGYMQPQQQQRME---------VTV 239
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
VP +R+G +IGKGG +I++++ + IRI +++ + + V ISG D + A
Sbjct: 240 PVPEARVGAIIGKGGEVISQLKSVIGVKIRISDRDDF--VPGTRNRKVTISGAADAVQIA 297
Query: 435 LIQVMTRLRAN 445
QV+ + N
Sbjct: 298 --QVLIHQKIN 306
>gi|169617928|ref|XP_001802378.1| hypothetical protein SNOG_12147 [Phaeosphaeria nodorum SN15]
gi|111059439|gb|EAT80559.1| hypothetical protein SNOG_12147 [Phaeosphaeria nodorum SN15]
Length = 485
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 136/345 (39%), Gaps = 81/345 (23%)
Query: 56 SIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDA 115
+IIG+GGE V Q+R + +K + + G+ ER++TV D A
Sbjct: 140 TIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVD--------------AVSK 185
Query: 116 LFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
F + R + +E + +LL+P IG +IGK G ++ I+ + A++
Sbjct: 186 AFGLIVRTLNQEDLEAPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAKLN- 244
Query: 176 LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN-------PSRSQHLLASAIS 228
D LP+ RS LV + G A V A+ +A L + P+ SQ+ S ++
Sbjct: 245 ASDTLLPNSGERS--LV-VLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMA 301
Query: 229 NSHSSSGSLVGPTAATPI-----------------------VGIAPLM--------GPYG 257
+ G V P P G AP M PYG
Sbjct: 302 ANVVPGGMSVQPYVPQPAGGQYQQPNNFRRQEPQRTPAHGGYGAAPHMQPGAPVHPSPYG 361
Query: 258 GYKGDT-AGDWSRSLYSAPRDD------------------------LSSKEFSLRLVCPV 292
+ AG R+ Y P + + + ++ P
Sbjct: 362 QPQMPYGAGSPGRAHYGGPPQQPGPYGAPQGAPVPHGGPPNQPPVSMPGQPLTQQIFIPN 421
Query: 293 ANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
+G +IGKGGA IN+IRQ SG+ IK++ + ++ L+T++ +
Sbjct: 422 DMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTITGTQ 466
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 8/143 (5%)
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
T+G R L + + D + LR + +IGKGG + QIR+ SGA V
Sbjct: 107 TSGANGRPLSHSQQVD-ETNWLHLRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVSDY 165
Query: 323 STEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS--FTTRLLVPTSR 380
S + ++TVS + D +S +VR E +E S S + RLL+P
Sbjct: 166 SRGAVERILTVSGQ---VDAVSKAFGLIVRT--LNQEDLEAPSTSTSKAYPMRLLIPHIL 220
Query: 381 IGCLIGKGGSIITEMRRLTKANI 403
IG +IGK G I E++ + A +
Sbjct: 221 IGSIIGKAGVRIREIQEASNAKL 243
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
G +T ++ +P+D +G +IGKGG + IR +G+ I+I + ++ LV I+G
Sbjct: 410 GQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINE-----PTDNSNERLVTITG 464
Query: 197 EASVVKKALCQIASRLHDNP 216
+ AL + SRL + P
Sbjct: 465 TQECNQMALYMLYSRLGEGP 484
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
T ++ +P +G +IGKGG+ I E+R+L+ + I+I N P S ++ +V I+G +
Sbjct: 413 LTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI----NEPTDNS-NERLVTITGTQE 467
Query: 430 LAKDALIQVMTRL 442
+ AL + +RL
Sbjct: 468 CNQMALYMLYSRL 480
>gi|426237799|ref|XP_004012845.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Ovis aries]
Length = 576
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 167/389 (42%), Gaps = 56/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
++ + +T +I I L L + E VK A+ +N R++
Sbjct: 298 NLKKVEQDTETKITI---SSLQDLTLYNPE------RTITVKGAI--------ENCCRAE 340
Query: 221 HLLASAISNSHSSS-GSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+ + ++ + ++ + P + +A + G + S +AP
Sbjct: 341 QEIMKKVREAYENDVAAMSLQSHLIPGLNLAAV-GLFPASSSAVPPPPSSVTGAAPYSSF 399
Query: 280 SSKEFSL-RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
E + ++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 400 MXPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 454
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 455 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 510
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 511 ELQNLTAAEV-VVPRDQTP---DENDQVI 535
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 31/151 (20%)
Query: 37 IIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV--- 92
+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMXPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGP 458
Query: 93 ----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPS 148
+ A + F P ++ + H R VP+
Sbjct: 459 PEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VPA 495
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 SAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 526
>gi|326674258|ref|XP_003200102.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Danio rerio]
Length = 517
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 12/182 (6%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV + + N
Sbjct: 81 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNNV 140
Query: 103 ED--GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
D +K Q A ++ + + D AKL+VP+ G +IGKGG
Sbjct: 141 HDFIAEKVREMPQSAQKTEPVSILQPQTTVNPD----RVKQAKLIVPNSTAGLIIGKGGA 196
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
V+ + ++GA +++ + P + +V ISGE +KA+ I ++ ++P S
Sbjct: 197 TVKAVMEQSGAWVQLSQK---PDGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSS 253
Query: 221 HL 222
L
Sbjct: 254 CL 255
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 89/177 (50%), Gaps = 23/177 (12%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLI--TVSS 335
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI TV +
Sbjct: 77 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 136
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIG 386
D ++ VR P+ ++K E S L TT +L+VP S G +IG
Sbjct: 137 LNNVHDFIAEK----VREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIG 192
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
KGG+ + + + A +++ K P + + +V ISG+ + + A+ ++ +++
Sbjct: 193 KGGATVKAVMEQSGAWVQLSQK---PDGINLQERVVTISGEPEQNRKAVEIIVQKIQ 246
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 13/139 (9%)
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
P S +R + + + T GD+ A +HD + ++ G + +
Sbjct: 30 PDSRKRPLETPTEASSTKRTNTGDRCNQAA------IHDPPFSSDIVGFHEEG---EYFL 80
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL-PSCALRSDELVQISGEASVV 201
K+L+PS G +IGKGGQ + ++ ETGA I++ K + P R + I G +
Sbjct: 81 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER---VCLIQGTVEAL 137
Query: 202 KKALCQIASRLHDNPSRSQ 220
IA ++ + P +Q
Sbjct: 138 NNVHDFIAEKVREMPQSAQ 156
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + ++A L E G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 404 ATNGYLSAASPLVASSLLATEKLAEGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 463
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I+ R+
Sbjct: 464 RIQISKKGEFVPGTRNRK---VTITGSPAATQAAQYLISQRI 502
>gi|255719726|ref|XP_002556143.1| KLTH0H06050p [Lachancea thermotolerans]
gi|238942109|emb|CAR30281.1| KLTH0H06050p [Lachancea thermotolerans CBS 6340]
Length = 392
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 128/306 (41%), Gaps = 54/306 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R LC +++ I+G GGE + +++ +T ++I + + + G ERV+ + ++
Sbjct: 59 RMLCLVKQASMIVGPGGEKISRMKEETNTRINVSDNIRGVPERVIFIRGRCEDV------ 112
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+F + R I E G E S+ +T +L+P +GCVIG+ G ++ I
Sbjct: 113 --------AKVFGMVVRAINGETDG-ESSEQSATLTLNILIPHHMMGCVIGRQGSRLREI 163
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVV--------------------KKAL 205
+ A++ + + LP + +D ++ +SG A + KK +
Sbjct: 164 EELSAAKL-MAGPQTLP---MSNDRILCVSGVADAIHIATYYVGQTILNHKATFASKKCI 219
Query: 206 CQIASRLHDNPSRS-----QHLLASAISNSHSSSGSLVGPTA------ATPIVGIAPLMG 254
+ S LH S QH + L +A A P V AP M
Sbjct: 220 FYLPSLLHSVLVNSYGVSLQHQQQHQYRPGENGKKRLHRYSASPDFGYAYPGVPSAPHMA 279
Query: 255 PYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
+ DT + AP+ L +E + +G VIGKGG IN I++ +G
Sbjct: 280 VHNVRVADTLAAATIPPALAPQLSLIQQEVYID----DNYVGNVIGKGGKHINSIKETTG 335
Query: 315 AAIKVD 320
+I++D
Sbjct: 336 CSIQID 341
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 75/172 (43%), Gaps = 42/172 (24%)
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
P ++++ LR++C V ++G GG I+++++E+ I V
Sbjct: 47 PGNEINKDYIHLRMLCLVKQASMIVGPGGEKISRMKEETNTRINVS-------------- 92
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLI-----------------SFTTRLLVP 377
D + E V+ ++ RC E + + G++ + T +L+P
Sbjct: 93 ------DNIRGVPERVIFIRGRC-EDVAKVFGMVVRAINGETDGESSEQSATLTLNILIP 145
Query: 378 TSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
+GC+IG+ GS + E+ L+ A + P + LP +D ++ +SG D
Sbjct: 146 HHMMGCVIGRQGSRLREIEELSAAKLMAGP-QTLPM---SNDRILCVSGVAD 193
>gi|356552330|ref|XP_003544521.1| PREDICTED: uncharacterized protein LOC100813135 [Glycine max]
Length = 670
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 97/181 (53%), Gaps = 23/181 (12%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV---PGSEERVVTVYSASDETNAFEDGD 106
P ++G IIG+GGE +K L++ + +KI++ + P S R V + + D A +
Sbjct: 129 PNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVELMGSPD---AIATAE 185
Query: 107 KFVSPAQDALFKVH---DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
K ++ + L + +IA + G SD + +K +P++++G VIGKGG+ ++
Sbjct: 186 KLIN---EVLAEAETGGSGIIARRVAGQAGSD---EYVSK--IPNNKVGLVIGKGGETIK 237
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVV---KKALCQIAS--RLHDNPSR 218
N+++ TGA+I+++ HLP ++ ++I G + K+ + Q+ S H NP+
Sbjct: 238 NMQASTGARIQVIP-LHLPPGDTSTERTLKIEGTPEQIESAKQMVNQVISGENRHRNPAM 296
Query: 219 S 219
S
Sbjct: 297 S 297
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLS 344
S ++ P +G +IGKGG I ++ +SGA I+V + + D T + +
Sbjct: 123 SKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQV-TRDMDADPNSATRTVELMGSPDAI 181
Query: 345 ATIEAVVRLQPRCSEKIERDSGLIS-----------FTTRLLVPTSRIGCLIGKGGSIIT 393
AT E ++ +E SG+I+ + ++ +P +++G +IGKGG I
Sbjct: 182 ATAEKLINE--VLAEAETGGSGIIARRVAGQAGSDEYVSK--IPNNKVGLVIGKGGETIK 237
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISG---DLDLAKDALIQVMT 440
M+ T A I+++P +LP + + ++I G ++ AK + QV++
Sbjct: 238 NMQASTGARIQVIPL-HLPPGDTSTERTLKIEGTPEQIESAKQMVNQVIS 286
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 42/59 (71%), Gaps = 4/59 (6%)
Query: 138 HQV---TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELV 192
HQV + K+ +P+ ++G +IGKGG+ ++ ++ ++GA+I++ +D + P+ A R+ EL+
Sbjct: 117 HQVGGASKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVELM 175
>gi|341896366|gb|EGT52301.1| hypothetical protein CAEBREN_06932 [Caenorhabditis brenneri]
Length = 538
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 166/402 (41%), Gaps = 116/402 (28%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN------ 100
Y P + +G +IG+GG ++ ++ + ++++ A D++N
Sbjct: 58 YPVPEKMVGLVIGKGGTEIRLIQQTSACRVQM---------------DADDQSNDGIRNC 102
Query: 101 AFEDGDKFVSPAQDALFKVHDR---VIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
E V+ A+ + +V +R ++ E DE VT +L+PSD+IG VIGK
Sbjct: 103 TIEGTPDQVAIAKQMITQVINRNQGIVPTESTDDE-------VTEDILIPSDKIGLVIGK 155
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GG+ ++ ++ ++G LR+ +VQ S A+ K L R+ P+
Sbjct: 156 GGETIRTVQEQSG---------------LRTCNVVQDSTSATGQPKPL-----RMSGTPT 195
Query: 218 --RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
+ L + I N+ + S++
Sbjct: 196 AVETAKALVTNIMNNIQGNISML------------------------------------- 218
Query: 276 RDDLSSKEFSLR--LVCPVANIGGVIGKGGAIINQIRQESGAAI--KVDSSSTEGDDCLI 331
+ L S + R ++ P + G +IGKGG +I ++ QE+G I K DS D +
Sbjct: 219 QKSLHSDAYPARGEVIVPRLSAGMIIGKGGEMIKRLAQETGTKIQFKPDSDPNSEDRIAV 278
Query: 332 TVSSKEFFEDTLSATIEAVVRLQPRCSEKIE---RDSGLISFTTRLL---VPTSRIGCLI 385
V S+ E + R R +E + +++G+ ++ VP S+ G +I
Sbjct: 279 IVGSR-----------EQIYRATERITEIVNKAIKNNGVNPNGQQIFYLHVPASKCGLVI 327
Query: 386 GKGGSIITEMRRLTKANIRIL-PKENLPKIASEDDEMVQISG 426
GKGG I ++ R T A + P E ++D+++ +I G
Sbjct: 328 GKGGENIKQIERDTGATCGLAGPAEQ----KNDDEKVFEIKG 365
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 24/122 (19%)
Query: 283 EFSLRLVCPVAN--IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD---DCLITVSSKE 337
E ++ + PV +G VIGKGG I I+Q S +++D+ D +C
Sbjct: 51 ELNIIDIYPVPEKMVGLVIGKGGTEIRLIQQTSACRVQMDADDQSNDGIRNC-------- 102
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLI-------SFTTRLLVPTSRIGCLIGKGGS 390
T+ T + V + ++ I R+ G++ T +L+P+ +IG +IGKGG
Sbjct: 103 ----TIEGTPDQVAIAKQMITQVINRNQGIVPTESTDDEVTEDILIPSDKIGLVIGKGGE 158
Query: 391 II 392
I
Sbjct: 159 TI 160
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 14/153 (9%)
Query: 32 DRDQFIIGPEDT----VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEE 87
+R+Q I+ E T L P KIG +IG+GGE ++ + +S +R V S
Sbjct: 123 NRNQGIVPTESTDDEVTEDILIPSDKIGLVIGKGGETIR--TVQEQSGLRTCNVVQDSTS 180
Query: 88 RV--VTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLL 145
S A E V+ + + + + ++ + L D + +++
Sbjct: 181 ATGQPKPLRMSGTPTAVETAKALVTNIMNNI-QGNISMLQKSLHSD-----AYPARGEVI 234
Query: 146 VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD 178
VP G +IGKGG++++ + ETG +I+ D
Sbjct: 235 VPRLSAGMIIGKGGEMIKRLAQETGTKIQFKPD 267
>gi|330914909|ref|XP_003296833.1| hypothetical protein PTT_07029 [Pyrenophora teres f. teres 0-1]
gi|311330863|gb|EFQ95085.1| hypothetical protein PTT_07029 [Pyrenophora teres f. teres 0-1]
Length = 485
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 133/345 (38%), Gaps = 81/345 (23%)
Query: 56 SIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDA 115
+IIG+GGE V Q+R + +K + + G+ ER++TV D A
Sbjct: 143 TIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVD--------------AVSK 188
Query: 116 LFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
F + R + +E + +LL+P IG +IGK G ++ I+ + A++
Sbjct: 189 AFGLIVRTLNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGIRIREIQEASNAKLN- 247
Query: 176 LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN-------PSRSQHLLASAIS 228
D LP+ RS + + G A V A+ +A L + P+ SQ+ S ++
Sbjct: 248 ASDTLLPNSGERS---LIVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMA 304
Query: 229 NSHSSSGSLVGPTAATP------------------------------IVGIAPLMGPYGG 258
+ G V P P + G P PYG
Sbjct: 305 ANVVPGGMSVQPYVPQPAGGQYSHPQNFRRQEPPQRTPAHGGYGAPHMHGQPPQQSPYGH 364
Query: 259 YKGDT-AGDWSRSLYSAPRDD-------------------------LSSKEFSLRLVCPV 292
AG SR Y P + + + ++ P
Sbjct: 365 PNMPYGAGSPSRGPYGGPAAPTPYGAHPAAAPVAHGGAAPHAAVGAMPGQPLTQQIFIPN 424
Query: 293 ANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
+G +IGKGGA IN+IRQ SG+ IK++ + ++ L+T++ +
Sbjct: 425 DMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTITGTQ 469
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IGKGG + QIR+ SGA V S + ++TVS + D +S +VR +
Sbjct: 144 IIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQ---VDAVSKAFGLIVRTLNQE 200
Query: 358 SEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
+ S ++ RLL+P IG +IGK G I E++ + A +
Sbjct: 201 DLETPSTSTSKAYPMRLLIPHILIGSIIGKAGIRIREIQEASNAKL 246
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI-LPKENLPKIASEDDEMVQISGDL 428
T ++ +P +G +IGKGG+ I E+R+L+ + I+I P +N ++ +V I+G
Sbjct: 416 LTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDN------SNERLVTITGTQ 469
Query: 429 DLAKDALIQVMTRL 442
+ + AL + +RL
Sbjct: 470 ECNQMALYMLYSRL 483
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
G +T ++ +P+D +G +IGKGG + IR +G+ I+I + ++ LV I+G
Sbjct: 413 GQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINE-----PTDNSNERLVTITG 467
Query: 197 EASVVKKALCQIASRL 212
+ AL + SRL
Sbjct: 468 TQECNQMALYMLYSRL 483
>gi|444727083|gb|ELW67590.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Tupaia
chinensis]
Length = 644
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 167/398 (41%), Gaps = 72/398 (18%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 261 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 320
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 321 TSA----------ACKSILEIMYKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 363
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 364 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 421
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ GI P T+G S P
Sbjct: 422 DIASMNLQAHLIPGLNLNALGLFPPTS-----GIPP----------PTSGPPSAMTPPYP 466
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK +
Sbjct: 467 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKAQGR------IYGKIKE 519
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
+ F +EA +R VP+ G +IGKGG +
Sbjct: 520 ENFVSPKEEVKLEAHIR-----------------------VPSFAAGRVIGKGGKTAS-- 554
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ +R +E++ ++A + L +AKD
Sbjct: 555 --TSAKPVRWYERESIERLAENSGAANAQNYRLCMAKD 590
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 19/167 (11%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG--DDCLITVSSKEFFE 340
+ LRL+ P +G +IGK GA I I +++ + I V G + + +S+ E
Sbjct: 263 DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPE--- 319
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTT----RLLVPTSRIGCLIGKGGSIITEMR 396
SA ++++ E + +++ I FT ++L + +G LIGK G + ++
Sbjct: 320 -GTSAACKSIL-------EIMYKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIE 371
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
+ T I I P + L E + + G+++ A ++M ++R
Sbjct: 372 QDTDTKITISPLQELTLYNPE--RTITVKGNVETCAKAEEEIMKKIR 416
>gi|170574714|ref|XP_001892930.1| KH domain containing protein [Brugia malayi]
gi|158601280|gb|EDP38236.1| KH domain containing protein [Brugia malayi]
Length = 614
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 153/372 (41%), Gaps = 79/372 (21%)
Query: 54 IGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQ 113
+G++IGRGGE + Q++ T ++++ G+ R T+ + D+ +
Sbjct: 82 LGNVIGRGGEQISQIQSQTNCRVQMSPESDGNNVRQCTLQGSKMSV------DRARAMIN 135
Query: 114 DALFKVHDRVI---AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+ + + +R A G G Q+T ++ +P + G VIGKGG+ ++NI+ +TG
Sbjct: 136 EVIARAGNRPPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTG 195
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS 230
++ ++++ + ++I+G+ V+ A + L SR H
Sbjct: 196 VKMVMIQENQESGGQPKP---LRITGDPEKVENARRMVEEILQ---SREDH--------- 240
Query: 231 HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVC 290
P + G G + G S PR
Sbjct: 241 -------------------PPGHFGFPGSFGMSGGQRSIGEVIVPR-------------- 267
Query: 291 PVANIGGVIGKGGAIINQIRQESGAAI--KVDSSSTEGDDCLITVSSKEFFEDTLSATIE 348
A++G +IGKGG I ++ ESGA I K D+ T + C + + T E
Sbjct: 268 --ASVGMIIGKGGETIKRLAAESGAKIQFKPDNDQTAQERCAV-----------IQGTAE 314
Query: 349 AVVRLQPRCSEKIERD---SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+ + SE +++ G F + VP+++ G +IGKGG I ++ + A++ +
Sbjct: 315 QIAKATQFISELVKKSGAAGGAEMF--YMHVPSNKTGLVIGKGGETIKQICAESGAHVEL 372
Query: 406 LPKENLPKIASE 417
+ P ASE
Sbjct: 373 --SRDPPPNASE 382
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 24/160 (15%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
DH P + G + G + ++ + P +G IIG+GGE +K+L ++ +KI+
Sbjct: 239 DHPPGHFGFPGSFG---MSGGQRSIGEVIVPRASVGMIIGKGGETIKRLAAESGAKIQFK 295
Query: 80 -ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH 138
+ ++ER + +++ +F+S EL + GG
Sbjct: 296 PDNDQTAQERCAVIQGTAEQ---IAKATQFIS----------------ELVKKSGAAGGA 336
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD 178
++ + VPS++ G VIGKGG+ ++ I +E+GA + + +D
Sbjct: 337 EMF-YMHVPSNKTGLVIGKGGETIKQICAESGAHVELSRD 375
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRL- 353
+G VIG+GG I+QI+ ++ +++ S + T+ + D A I V+
Sbjct: 82 LGNVIGRGGEQISQIQSQTNCRVQMSPESDGNNVRQCTLQGSKMSVDRARAMINEVIARA 141
Query: 354 --QPRCSEKIERDSGLISFTTR-----LLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
+P + D G+ T R + +P ++ G +IGKGG I ++ T + ++
Sbjct: 142 GNRPPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKM-VM 200
Query: 407 PKENLPKIASEDDEMVQISGDLDLAKDA 434
+EN + + + ++I+GD + ++A
Sbjct: 201 IQEN--QESGGQPKPLRITGDPEKVENA 226
>gi|449546975|gb|EMD37943.1| hypothetical protein CERSUDRAFT_82176 [Ceriporiopsis subvermispora
B]
Length = 433
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 112/263 (42%), Gaps = 18/263 (6%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIG+GG V ++R + +++ + E++PG+ ER++ V D A
Sbjct: 126 IIGKGGSHVNEIREQSGARVVVSESIPGNPERILNVSGPLD--------------AVSKA 171
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT K ++P+ ++G VIGKGG ++ I+ +GA++
Sbjct: 172 FGLIVRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDASGARLN-A 230
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
+ LP R ++ +SG A + A I + L + R S+ S S
Sbjct: 231 SEGMLPGSTER---VLSVSGVADAIHIATYYIGNILIEANERMPSYNNSSYRPSSYSRRP 287
Query: 237 LVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIG 296
G P + Y AP+ + + ++ P +G
Sbjct: 288 PYSGGGGGGGGGGGSSYVPGAAAGAGAGAGGYSNPYQAPQGGPPQQLQTQQIFIPNDLVG 347
Query: 297 GVIGKGGAIINQIRQESGAAIKV 319
+IGKGGA IN+IR S + IK+
Sbjct: 348 CIIGKGGAKINEIRHMSASQIKI 370
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 9/109 (8%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IGKGG+ +N+IR++SGA + V S + ++ VS D +S +VR R
Sbjct: 126 IIGKGGSHVNEIREQSGARVVVSESIPGNPERILNVSGP---LDAVSKAFGLIVR---RI 179
Query: 358 S-EKIERDS--GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
+ E ++ S G + T + ++P SR+G +IGKGG+ I E++ + A +
Sbjct: 180 NDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDASGARL 228
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-------EHLPSCALRSDE-LV 192
T ++ +P+D +GC+IGKGG + IR + +QI+I++ P+ A E LV
Sbjct: 336 TQQIFIPNDLVGCIIGKGGAKINEIRHMSASQIKIMEPGATAVGMNGAPAPAGGEGERLV 395
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSH 231
I+G+ + ++ A+ + RL + + L A SH
Sbjct: 396 VITGQPANIQMAVQLLYHRLEQ--EKQKQLRAQQTGASH 432
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 26/36 (72%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
T ++ +P +GC+IGKGG+ I E+R ++ + I+I+
Sbjct: 336 TQQIFIPNDLVGCIIGKGGAKINEIRHMSASQIKIM 371
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASD 97
+++ P ++GS+IG+GG +K+++ + +++ E +PGS ERV++V +D
Sbjct: 198 KFMIPNSRMGSVIGKGGTKIKEIQDASGARLNASEGMLPGSTERVLSVSGVAD 250
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+ + L+ + +IGKGG V IR ++GA R++ E +P R ++ +SG
Sbjct: 112 IHMRCLIVTQDASIIIGKGGSHVNEIREQSGA--RVVVSESIPGNPER---ILNVSGPLD 166
Query: 200 VVKKALCQIASRLHDNP 216
V KA I R++D P
Sbjct: 167 AVSKAFGLIVRRINDEP 183
>gi|154295229|ref|XP_001548051.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|347829292|emb|CCD44989.1| similar to KH domain RNA-binding protein [Botryotinia fuckeliana]
Length = 371
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 135/301 (44%), Gaps = 50/301 (16%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + ++ G IIG+GG+ V LR +T K + + V G +RV+T+ D +
Sbjct: 53 RAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTISGGCDSIS----- 107
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ S AL + ++ + G ++G H + KLL+ +Q+G +IG+ G +++I
Sbjct: 108 -RAYSIVAKALLEGAPQM---GMGGVVSNNGTHPI--KLLISHNQMGTIIGRQGLKIKHI 161
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS------ 219
+ +G ++ + + E LP R +V++ G ++KA+ +I L D+ +R
Sbjct: 162 QDASGVRM-VAQKEMLPQSTER---IVEVQGNPEGIQKAIWEICKCLVDDWARGTGTVLY 217
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD-- 277
++ + NS S VG T YG + G+ + SAPR
Sbjct: 218 NPMVRTQTGNSGGMSQGNVGGTGRE-----------YGSSRVMRTGNGADFSESAPRSYN 266
Query: 278 ---------------DLSSKEFSLRLVC-PVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D + +E + + P +G +IG+ G+ I++IR+ SGA I +
Sbjct: 267 RRSESDAAQRGPPTHDENGEELQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAK 326
Query: 322 S 322
S
Sbjct: 327 S 327
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
D +G T + +P+D +GC+IG+ G + IR +GA+I I K H
Sbjct: 282 DENGEELQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKSPH 329
>gi|67536752|ref|XP_662150.1| hypothetical protein AN4546.2 [Aspergillus nidulans FGSC A4]
gi|40741699|gb|EAA60889.1| hypothetical protein AN4546.2 [Aspergillus nidulans FGSC A4]
gi|259482624|tpe|CBF77283.1| TPA: KH domain RNA-binding protein (AFU_orthologue; AFUA_2G02780)
[Aspergillus nidulans FGSC A4]
Length = 542
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 132/287 (45%), Gaps = 32/287 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + ++ G IIG+ G+ V LR +T K + + VPG +RV+TV T A
Sbjct: 230 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTV------TGALSGT 283
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ + L + ++ + G ++G H + +LL+ +Q+G +IG+ G +++I
Sbjct: 284 ARAYALVAKGLLEGAPQM---GMGGIVSNNGTHPI--RLLISHNQMGTIIGRQGLKIKHI 338
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR-SQHLLA 224
+ +G ++ + + E LP ++ +V++ G ++KA+ +I L D+ R + +L
Sbjct: 339 QDASGVRM-VAQKEMLPQS---TERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTILY 394
Query: 225 SAISNSHSSSGSLVGPTAATPIVGIAP---------LMGPYGGYKGDTAGDWSRSLYSAP 275
+ S SGS+ + P GGY + D S Y
Sbjct: 395 NPAVRSSVGSGSIQHNGGNSDSYNSRPYNRTGNGADFSDQSGGYGRRSNPDTSNRGYPLV 454
Query: 276 RDD---LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+D + ++ S+ P +G +IG+GG I +IR+ SGA I +
Sbjct: 455 TEDGEEIQTQNISI----PADMVGCIIGRGGTKITEIRRSSGARISI 497
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
DG T + +P+D +GC+IG+GG + IR +GA+I I K H + + + I
Sbjct: 457 DGEEIQTQNISIPADMVGCIIGRGGTKITEIRRSSGARISIAKAPHDET----GERMFTI 512
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHL 222
G A +KAL + L +R L
Sbjct: 513 MGSAQANEKALYLLYENLEAEKTRRSQL 540
>gi|296081618|emb|CBI20623.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 91/172 (52%), Gaps = 18/172 (10%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV---PGSEERVVTVYSASDETNAFEDGD 106
P ++G IIG+GGE +K L++ + +KI++ + P S R+V + D+ +
Sbjct: 143 PNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQ---IAKAE 199
Query: 107 KFVSPAQDALFKVH---DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
+ ++ D L + +++ L G S+ Q K VP++++G +IGKGG+ ++
Sbjct: 200 QLIN---DVLSEAEAGGSGIVSRRLTGQAGSE---QFVMK--VPNNKVGLIIGKGGETIK 251
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
N+++ TGA+I+++ HLP + VQI G + ++ A + + +N
Sbjct: 252 NMQARTGARIQVIP-LHLPPGDTSMERTVQIDGTSEQIESAKQLVNEVISEN 302
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 20/173 (11%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-------DSSSTEGDDCLIT----V 333
S ++ P +G +IGKGG I ++ +SGA I+V +S T + + T
Sbjct: 137 SKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQIA 196
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+++ D LS EA S ++ +G F + VP +++G +IGKGG I
Sbjct: 197 KAEQLINDVLS---EAEAGGSGIVSRRLTGQAGSEQFV--MKVPNNKVGLIIGKGGETIK 251
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISG---DLDLAKDALIQVMTRLR 443
M+ T A I+++P +LP + + VQI G ++ AK + +V++ R
Sbjct: 252 NMQARTGARIQVIPL-HLPPGDTSMERTVQIDGTSEQIESAKQLVNEVISENR 303
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 83/185 (44%), Gaps = 55/185 (29%)
Query: 137 GHQVTAKLL-VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQI 194
G+Q T+K + +P+ ++G +IGKGG+ ++ ++ ++GA+I++ +D + P+ R LV++
Sbjct: 132 GYQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTR---LVEL 188
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG 254
G + KA + L+ +S + + +V
Sbjct: 189 MGTPDQIAKA---------------EQLINDVLSEAEAGGSGIV---------------- 217
Query: 255 PYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
SR L S++F +++ P +G +IGKGG I ++ +G
Sbjct: 218 -------------SRRL----TGQAGSEQFVMKV--PNNKVGLIIGKGGETIKNMQARTG 258
Query: 315 AAIKV 319
A I+V
Sbjct: 259 ARIQV 263
>gi|51472291|gb|AAU04539.1| neurological oncogenic ventral antigen protein [Danio rerio]
Length = 473
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 12/182 (6%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV + + N
Sbjct: 66 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNNV 125
Query: 103 ED--GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
D +K Q A ++ + + D AKL+VP+ G +IGKGG
Sbjct: 126 HDFIAEKVREMPQSAQKTEPVSILQPQTTVNPD----RVKQAKLVVPNSTAGLIIGKGGA 181
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
V+ + ++GA +++ + P + +V ISGE +KA+ I ++ ++P S
Sbjct: 182 TVKAVMEQSGAWVQLSQK---PDGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSS 238
Query: 221 HL 222
L
Sbjct: 239 CL 240
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 89/177 (50%), Gaps = 23/177 (12%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLI--TVSS 335
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI TV +
Sbjct: 62 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 121
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIG 386
D ++ VR P+ ++K E S L TT +L+VP S G +IG
Sbjct: 122 LNNVHDFIAEK----VREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLVVPNSTAGLIIG 177
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
KGG+ + + + A +++ K P + + +V ISG+ + + A+ ++ +++
Sbjct: 178 KGGATVKAVMEQSGAWVQLSQK---PDGINLQERVVTISGEPEQNRKAVEIIVQKIQ 231
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 13/139 (9%)
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
P S +R + + + T GD+ A +HD + ++ G + +
Sbjct: 15 PDSRKRPLETPTEASSTKRTNTGDRCNQAA------IHDPPFSSDIVGFHEEG---EYFL 65
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL-PSCALRSDELVQISGEASVV 201
K+L+PS G +IGKGGQ + ++ ETGA I++ K + P R + I G +
Sbjct: 66 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER---VCLIQGTVEAL 122
Query: 202 KKALCQIASRLHDNPSRSQ 220
IA ++ + P +Q
Sbjct: 123 NNVHDFIAEKVREMPQSAQ 141
>gi|169775165|ref|XP_001822050.1| RNA-binding protein rnc1 [Aspergillus oryzae RIB40]
gi|238496215|ref|XP_002379343.1| KH domain RNA-binding protein [Aspergillus flavus NRRL3357]
gi|83769913|dbj|BAE60048.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220694223|gb|EED50567.1| KH domain RNA-binding protein [Aspergillus flavus NRRL3357]
gi|391872927|gb|EIT82002.1| polyC-binding proteins alphaCP-1 [Aspergillus oryzae 3.042]
Length = 357
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 134/299 (44%), Gaps = 58/299 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + ++ G IIG+ G+ V LR +T K + + VPG +RV+TV T +
Sbjct: 46 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTV------TGPLQGT 99
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ + L + ++ + G ++G H V +LL+ +Q+G +IG+ G +++I
Sbjct: 100 ARAYALVAKGLLEGAPQM---GMGGVVSNNGTHPV--RLLISHNQMGTIIGRSGLKIKHI 154
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
+ +G ++ + + E LP R +V++ G ++KA+ +I L D+ R
Sbjct: 155 QDASGVRM-VAQKEMLPQSTER---IVEVQGTPEGIEKAVWEIGKCLIDDWQR------- 203
Query: 226 AISNSHSSSGSLVGPTAATPIVGIAPLMGPYG-GYK-------------GDTAGDWSRSL 271
+G+++ A VG AP+ G GY D +G + R
Sbjct: 204 -------GTGTILYNPAVRASVGTAPVNQNVGNGYSSRPYNRTGNGADFSDQSGGYGRR- 255
Query: 272 YSAPRDDLSSKEFSL-----------RLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S P D S++ + L + P +G +IG+ G+ I +IR+ SGA I +
Sbjct: 256 -SNP--DTSNRGYPLVTEDGEEIQTQNISIPADMVGCIIGRAGSKITEIRRSSGARISI 311
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
DG T + +P+D +GC+IG+ G + IR +GA+I I K H + + + I
Sbjct: 271 DGEEIQTQNISIPADMVGCIIGRAGSKITEIRRSSGARISIAKAPHDDT----GERMFTI 326
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHL 222
G A +KAL + L +R L
Sbjct: 327 MGSAQANEKALYLLYENLEAEKTRRSQL 354
>gi|50311087|ref|XP_455567.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644703|emb|CAG98275.1| KLLA0F10703p [Kluyveromyces lactis]
Length = 417
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 132/325 (40%), Gaps = 64/325 (19%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P R LC +++ ++G GE V +++ +T ++I + + + G ERV+ V +E
Sbjct: 64 PNYINLRMLCLMKQASKVVGGKGERVNRIKSETNTRINVSDNINGVMERVIFVRGKCEEV 123
Query: 100 -NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
AF K V R I E D+ ++ + LL+P +GC+IG+
Sbjct: 124 ARAF---GKIV------------RAINNE-SDDDSNERSLPLVVNLLIPHHFMGCIIGRQ 167
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G + I + A++ + + LP + +D ++ ++G A + A I + +N S+
Sbjct: 168 GSRLHEIEDLSAARL-MASPQQLP---MSNDRILSLTGVADAIHIATYYIGQTILENESK 223
Query: 219 SQHL---------LASAISNSHS-----SSGSLVGPTAATPIVGIAPLMGPYGGYKGDTA 264
++ + S + N++ S G+ P TP+V Y T
Sbjct: 224 LKNKKSVFYHPGPMHSVLVNNYQMYMIYSGGAPTNPQDITPMVAPHQEHHQYHPMDKKTM 283
Query: 265 GDWSRSLYSA----------PRDD-------------LSSKEFSLRLVCP----VAN--I 295
++ S P D L S LV P + N +
Sbjct: 284 NRRTKPPVSKYPIGPQQSLQPYTDMVDSCKHVKIISQLQQSPISPHLVLPQEVFIDNKFV 343
Query: 296 GGVIGKGGAIINQIRQESGAAIKVD 320
G VIGKGG I QI+Q +G IK++
Sbjct: 344 GNVIGKGGKNIQQIKQSTGCMIKIN 368
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 69/162 (42%), Gaps = 40/162 (24%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
+LR++C + V+G G +N+I+ E+ I V D +
Sbjct: 67 INLRMLCLMKQASKVVGGKGERVNRIKSETNTRINVS--------------------DNI 106
Query: 344 SATIEAVVRLQPRCSE------KIER----------DSGLISFTTRLLVPTSRIGCLIGK 387
+ +E V+ ++ +C E KI R + + LL+P +GC+IG+
Sbjct: 107 NGVMERVIFVRGKCEEVARAFGKIVRAINNESDDDSNERSLPLVVNLLIPHHFMGCIIGR 166
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
GS + E+ L+ A + P++ + +D ++ ++G D
Sbjct: 167 QGSRLHEIEDLSAARLMASPQQ----LPMSNDRILSLTGVAD 204
>gi|432895615|ref|XP_004076076.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Oryzias
latipes]
Length = 444
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 89/182 (48%), Gaps = 12/182 (6%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV + + N+
Sbjct: 9 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNSV 68
Query: 103 ED--GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
+ +K Q A ++ + + D AKL+VP+ G +IGKGG
Sbjct: 69 HNFIAEKVREMPQSAQKPEPVSILQPQTTVNPD----RVKQAKLIVPNSTAGLIIGKGGA 124
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
V+ + ++GA +++ + P + +V ISGE +KA+ I ++ ++P S
Sbjct: 125 TVKAVMEQSGAWVQLSQK---PEGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSS 181
Query: 221 HL 222
L
Sbjct: 182 CL 183
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 90/175 (51%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS-----STEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI + +
Sbjct: 5 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 64
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+++ I VR P+ ++K E S L TT +L+VP S G +IGKG
Sbjct: 65 L--NSVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKG 122
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V ISG+ + + A+ ++ +++
Sbjct: 123 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTISGEPEQNRKAVEIIVQKIQ 174
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + ++A L E G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 331 ASNGYLNASSPLMASSLLATEKLADGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 390
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I+ R+
Sbjct: 391 RIQISKKGEFIPGTRNRK---VTITGSPAATQAAQYLISQRI 429
>gi|338714774|ref|XP_003363150.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Equus
caballus]
Length = 360
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 122/287 (42%), Gaps = 73/287 (25%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L +A +N S
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPTNGGS------------------ 96
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
+S +LRLV P + G +IGK G I +IR
Sbjct: 97 ----------------------------VSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QES--GAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEA-VVRLQ-------PRCSEK 360
+ GA I S + G L++ + + A A V +LQ P S
Sbjct: 129 ESPPKGATIPYHPSLSLGT-VLLSANQGFSVQGQYGAVTSAEVTKLQQLSGHAVPFASPS 187
Query: 361 IER--DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+ D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 188 MVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 234
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 123/292 (42%), Gaps = 66/292 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVFH 74
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 75 AVSMIA------FKLDEDLCAAPTNGGSVSR--PPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 165 IRSET--GAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
IR GA I L + L +++ + G+ V A ++ Q L
Sbjct: 127 IRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTSAEV----------TKLQQL 176
Query: 223 LASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSK 282
A+ + S + P A T SS+
Sbjct: 177 SGHAVPFASPSMVPGLDPGAQT-----------------------------------SSQ 201
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T++
Sbjct: 202 EF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 249
>gi|383863655|ref|XP_003707295.1| PREDICTED: RNA-binding protein Nova-2-like isoform 2 [Megachile
rotundata]
Length = 535
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 27/222 (12%)
Query: 6 NSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
N KRSH + + KR D + G + L P G+IIG+GG+ +
Sbjct: 29 NGATKRSHYGSGKSLCYLRKRELERDTCNGVFHGDGTYHLKVLVPGVAAGAIIGKGGDTI 88
Query: 66 KQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDR 122
QL+ DT +K++I ++ PG+ ERV + + + A D F+ D + + D
Sbjct: 89 AQLQKDTGAKVKISKSHDFYPGTTERVCLITGSLEAIMAVMD---FI---MDKIREKPDL 142
Query: 123 VIAEELRGDEDSDGGHQVT-----AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI-- 175
L+ DS+ G K+LVP+ G +IGK G ++ I+ E+G+ ++I
Sbjct: 143 T----LKTTVDSESGKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQ 198
Query: 176 -LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KD L + + + GE + AL I +++ D+P
Sbjct: 199 KAKDVSL------QERCITVIGEKENNRNALMMILAKVADDP 234
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 16/170 (9%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS-----STEGDDCLITVSSKEF 338
+ L+++ P G +IGKGG I Q+++++GA +K+ S T CLIT S +
Sbjct: 66 YHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPGTTERVCLITGSLEAI 125
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT------RLLVPTSRIGCLIGKGGSII 392
+ I +R +P + K DS T ++LVP S G +IGK G+ I
Sbjct: 126 M--AVMDFIMDKIREKPDLTLKTTVDSESGKTTAERDKQVKILVPNSTAGMIIGKAGNYI 183
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
+++ + + ++I K K S + + + G+ + ++AL+ ++ ++
Sbjct: 184 KQIKEESGSYVQISQKA---KDVSLQERCITVIGEKENNRNALMMILAKV 230
>gi|256078995|ref|XP_002575777.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043992|emb|CCD81538.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 396
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA-------- 101
P R +G +IG+GGE + QL+ DT+ K++I + G+ ER VT+ + +
Sbjct: 106 PDRYVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQIDHAKQMIGDI 163
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
E K +P A + G T +++VP + G VIGK G+
Sbjct: 164 IERAGKNGTPTTPAY-----------------NSTGSITTIEMMVPGLKAGLVIGKNGET 206
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA----LCQIASRLHDNPS 217
++N++ E G ++ +++ + P+ D+ ++ISGE + V+KA L I SR D P
Sbjct: 207 IKNLQEENGVKMVLIQQSNNPTP---EDKPLRISGEPARVEKARQAVLVLINSR--DRPG 261
Query: 218 RSQH 221
S H
Sbjct: 262 GSMH 265
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 111/287 (38%), Gaps = 81/287 (28%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+ +S G VT + +P +G VIGKGG+ + ++++T +++I S A +
Sbjct: 90 NNNSVGSRVVTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQI-------SQAGTPER 142
Query: 191 LVQISGEASVV---KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIV 247
V ++G + K+ + I R N + + +++S+GS+
Sbjct: 143 TVTLTGTPQQIDHAKQMIGDIIERAGKN--------GTPTTPAYNSTGSIT--------- 185
Query: 248 GIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
++ ++ P G VIGK G I
Sbjct: 186 -------------------------------------TIEMMVPGLKAGLVIGKNGETIK 208
Query: 308 QIRQESGAA---IKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERD 364
+++E+G I+ ++ T D L E A + V + R +R
Sbjct: 209 NLQEENGVKMVLIQQSNNPTPEDKPLRISGEPARVEKARQAVL---VLINSR-----DRP 260
Query: 365 SGLISF------TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
G + + T++ VP + G +IGKGG I E+ R++ A++ I
Sbjct: 261 GGSMHYGYDGQETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEI 307
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T + P K G +IG+ GE +K L+ + K+ V + +++ T
Sbjct: 185 TTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKM-------------VLIQQSNNPTP-- 229
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH-------QVTAKLLVPSDQIGCVI 155
ED +S + K V+ L D GG Q T++ VP+++ G VI
Sbjct: 230 EDKPLRISGEPARVEKARQAVLV--LINSRDRPGGSMHYGYDGQETSQYAVPAEKAGLVI 287
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR 211
GKGG+ ++ I +GA + I K E P +++ + + G +++A+ I+ R
Sbjct: 288 GKGGESIKEICRVSGAHVEISK-EPPPDPSIK---IFNVRGNRQEIEQAIRMISER 339
>gi|147844462|emb|CAN82085.1| hypothetical protein VITISV_031054 [Vitis vinifera]
Length = 473
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 162/388 (41%), Gaps = 74/388 (19%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERV--------VT 91
P D V+R + P+ K+GSIIGR GE++K++ +T+++IR+ + G+ +R+
Sbjct: 75 PGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIGXMEKKMLSV 134
Query: 92 VYSASDE------TNAFEDGDKFVSPAQDALFKVHDRVIA-EELRGDEDSDGGHQVTA-- 142
+ D + E+ + +SPA DA+ +V RV E GD D QV
Sbjct: 135 LLKVVDNLLEKVLISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGLFD---QVNTGE 191
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
+ + + G QN+ + + ++ +L +P A + +V++ GEA V+
Sbjct: 192 HWCICASTVRSWFAHFGSKFQNLXAFS-XEVYLLXQNEVPFYAAADERIVELQGEALKVQ 250
Query: 203 KALCQIASRLHD---------------NPSRSQHLLASAISNS---HSSSGSLVGPTAAT 244
KAL + L N + SQ + ++ H +S + +G +
Sbjct: 251 KALEAVVGHLRKFLVDHSVLPLFERTYNATISQDRQSDTWADKSLLHGTSQTGMGSDYSL 310
Query: 245 PI---------------VGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLV 289
P G+ P+ G G G + R+ AP + + +
Sbjct: 311 PAKRESLYLDRETQMEHSGL-PMYGQEHGLSGIRSSGLGRA--GAP----IVTQIAQTMQ 363
Query: 290 CPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV---SSKEFFEDTLSAT 346
P++ +IG GGA I IR+ SGA + V S D+ + + SS+EF +
Sbjct: 364 IPLSYAEDIIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQEFISN----- 418
Query: 347 IEAVVRLQPRCSEKIERDSGLISFTTRL 374
+P S + DSGL S ++L
Sbjct: 419 -----HKEPVPSSYGKMDSGLRSSYSQL 441
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 86/200 (43%), Gaps = 31/200 (15%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCL--------------- 330
RL+ PV +G +IG+ G +I ++ +E+ A I+V + D +
Sbjct: 80 FRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIGXMEKKMLSVLLKVV 139
Query: 331 ------ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDS-GL---ISFTTRLLVPTSR 380
+ +S +E E LS ++AV+R+ R + E + GL ++ + S
Sbjct: 140 DNLLEKVLISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGLFDQVNTGEHWCICAST 199
Query: 381 IGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMT 440
+ GS + + + +L + +P A+ D+ +V++ G+ + AL V+
Sbjct: 200 VRSWFAHFGSKFQNLXAFS-XEVYLLXQNEVPFYAAADERIVELQGEALKVQKALEAVVG 258
Query: 441 RLRANLFDREGAVSTFVPVF 460
LR L D + +P+F
Sbjct: 259 HLRKFLVDH-----SVLPLF 273
>gi|449669385|ref|XP_002157937.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Hydra magnipapillata]
Length = 549
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 180/432 (41%), Gaps = 65/432 (15%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI----GETVPGS-EERVVTVYS 94
P+ R L P + ++G+GG + ++ +T +KI I G G +E +VT+
Sbjct: 135 PQQYPCRILVPSDMVKVLLGKGGCTITAMQTNTGTKIDIHRDKGPCYRGPCDETIVTIKG 194
Query: 95 ASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
D + F ++ L + E R D+D + KLL G +
Sbjct: 195 ---------DPESFSKAIREILSAFSNEY---EKR---DTDARKPIQLKLLAHDLLCGRI 239
Query: 155 IGKGGQIVQNIRSETGAQIRILKD-------EHLPSCALRSDELVQISGEASVVKKALCQ 207
IGKGG ++ + E+ I+ + + +P+ + + E V I+ E S+ A+C
Sbjct: 240 IGKGGNNLKQTKQESNVSKLIISNSIYEESSQMIPTGFVCTGERV-ITIEGSL--DAIC- 295
Query: 208 IASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPI-VGIAPLMGP--YGGYKGDTA 264
IA L R +++ A + +++ G G I G P M P YGGY DT
Sbjct: 296 IAESLISKKLR-EYMEKDARNQYNTNMGLYHGAAFGGQINYGYNPQMYPRMYGGYTVDTF 354
Query: 265 G--DWSRSL-------------YSAPRDDLSSKEFSLRLVC---PVANIGGVIGKGGAII 306
G + S+ Y+ P+ F C P +G +IG+ G I
Sbjct: 355 GYPAYPSSMNNYPGILGHGYLPYTPPQQVPYYSNFEPETTCILIPTKEVGAIIGRNGGYI 414
Query: 307 NQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSG 366
++++Q SGA I+V G+ + V + A + + + E ++
Sbjct: 415 SRMKQYSGAQIRVIKGDEGGESKVEIVGPPD-------CQWRASLCVFSKIKETMKVAYS 467
Query: 367 LISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
T +VP S +G +IGK G ++ +++ +A+I + PK+ +D V I+G
Sbjct: 468 EAQLKTEFIVPGSCVGRVIGKKGQVVQDIQDKAQADIEV-PKDK----QGANDVPVYITG 522
Query: 427 DLDLAKDALIQV 438
+ + A+ ++
Sbjct: 523 TFNGTQIAISRI 534
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 25/174 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
PE T L P +++G+IIGR G + +++ + ++IR+ + G E +V
Sbjct: 391 PETTCI--LIPTKEVGAIIGRNGGYISRMKQYSGAQIRVIKGDEGGESKV---------- 438
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+ V P D ++ V ++ + + Q+ + +VP +G VIGK G
Sbjct: 439 -------EIVGPP-DCQWRASLCVFSKIKETMKVAYSEAQLKTEFIVPGSCVGRVIGKKG 490
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
Q+VQ+I+ + A I + KD+ +D V I+G + + A+ +I +H
Sbjct: 491 QVVQDIQDKAQADIEVPKDKQGA-----NDVPVYITGTFNGTQIAISRIRDIVH 539
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
TT +L+PT +G +IG+ G I+ M++ + A IR++ K + V+I G D
Sbjct: 393 TTCILIPTKEVGAIIGRNGGYISRMKQYSGAQIRVI------KGDEGGESKVEIVGPPDC 446
Query: 431 AKDALIQVMTRLRANL 446
A + V ++++ +
Sbjct: 447 QWRASLCVFSKIKETM 462
>gi|340959534|gb|EGS20715.1| hypothetical protein CTHT_0025510 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 373
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 126/292 (43%), Gaps = 51/292 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L ++ G IIG+GG+ V LR +T K + + V G +RV+T+ D
Sbjct: 54 RALVSSKEAGVIIGKGGQNVANLREETGVKAGVSKVVQGVYDRVLTITGGCD-------- 105
Query: 106 DKFVSPAQDALFKVHDRVIAE-----ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A + V R + E + G +G H + KLL+ +Q+G +IG+ GQ
Sbjct: 106 ------AVSRAYAVVARALLEGAPAVSMGGVVQHNGTHPI--KLLISHNQMGTIIGRQGQ 157
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
++ I+ +G ++ + + E LP R +V++ G +++A+ +I L D+ R
Sbjct: 158 RIKYIQDVSGVRM-VAQKEMLPQSTER---IVEVQGTPEGIQRAVWEICKCLVDDWQRGT 213
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTA--GDWSRSL------- 271
+ P T + G G G+ A + SRS
Sbjct: 214 GTV-------------FYNPAVRTQVGGFHDRYGSRVLRTGNGADFSNGSRSYGRRSDSE 260
Query: 272 ---YSAPRDDLSSKEFSLRLVC-PVANIGGVIGKGGAIINQIRQESGAAIKV 319
P D + +E + + P +G +IG+GG+ I++IR+ SGA I +
Sbjct: 261 GGPRGPPTHDENGEEIQTQNISIPADMVGCIIGRGGSKISEIRKTSGARISI 312
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 88/212 (41%), Gaps = 51/212 (24%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI---GETVPGSEERVVTVYSASD--ETN 100
+ L ++G+IIGR G+ +K I S +R+ E +P S ER+V V + +
Sbjct: 140 KLLISHNQMGTIIGRQGQRIKY--IQDVSGVRMVAQKEMLPQSTERIVEVQGTPEGIQRA 197
Query: 101 AFE------------DGDKFVSPA-QDALFKVHDRVIAEELRGDE--------------- 132
+E G F +PA + + HDR + LR
Sbjct: 198 VWEICKCLVDDWQRGTGTVFYNPAVRTQVGGFHDRYGSRVLRTGNGADFSNGSRSYGRRS 257
Query: 133 DSDGGHQ------------VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
DS+GG + T + +P+D +GC+IG+GG + IR +GA+I I K H
Sbjct: 258 DSEGGPRGPPTHDENGEEIQTQNISIPADMVGCIIGRGGSKISEIRKTSGARISIAKAPH 317
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRL 212
+ + + I G A + AL + L
Sbjct: 318 DET----GERMFTIMGTAKANETALFLLYENL 345
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 13/109 (11%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
Q+T + LV S + G +IGKGGQ V N+R ETG + + K D ++ I+G
Sbjct: 50 QLTLRALVSSKEAGVIIGKGGQNVANLREETGVKAGVSK-----VVQGVYDRVLTITGGC 104
Query: 199 SVVKKALCQIA-SRLHDNPSRS-----QHLLASAISN--SHSSSGSLVG 239
V +A +A + L P+ S QH I SH+ G+++G
Sbjct: 105 DAVSRAYAVVARALLEGAPAVSMGGVVQHNGTHPIKLLISHNQMGTIIG 153
>gi|242785360|ref|XP_002480578.1| KH domain RNA-binding protein [Talaromyces stipitatus ATCC 10500]
gi|218720725|gb|EED20144.1| KH domain RNA-binding protein [Talaromyces stipitatus ATCC 10500]
Length = 367
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 130/287 (45%), Gaps = 29/287 (10%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + ++ G IIG+ G+ V LR +T K + + V G +RV+TV T A +
Sbjct: 51 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTV------TGALQGC 104
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ S L + +V + G ++G H + +LL+ +Q+G +IG+ G +++I
Sbjct: 105 ARAYSIVAKGLLEGAPQV---GMGGVVQNNGTHPI--RLLISHNQMGTIIGRQGLKIKHI 159
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH--LL 223
+ +G ++ + + E LP R +V++ G ++KA+ +I L D+ R L
Sbjct: 160 QDASGVRM-VAQKEMLPQSTER---IVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLY 215
Query: 224 ASAISNSHSSSGSL-----------VGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLY 272
A+ S SG L G + A P GGY +GD
Sbjct: 216 NPAVRVSIGGSGQLNHNGDRTGGSYGGGRSYNRTGNGADFSEPSGGYNRRGSGDNGNRNL 275
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
DD + + + P +G +IG+GG+ I++IR+ SGA I +
Sbjct: 276 PLVTDDGEEVQ-TQNISIPADMVGCIIGRGGSKISEIRRSSGARISI 321
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 134 SDGGHQV-TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+D G +V T + +P+D +GC+IG+GG + IR +GA+I I K H + + +
Sbjct: 279 TDDGEEVQTQNISIPADMVGCIIGRGGSKISEIRRSSGARISIAKAPHDET----GERMF 334
Query: 193 QISGEASVVKKALCQIASRLH-DNPSRSQH 221
I G A +KAL + L + RSQ
Sbjct: 335 TIMGSAQANEKALYLLYENLEAEKMRRSQQ 364
>gi|328702094|ref|XP_003241800.1| PREDICTED: hypothetical protein LOC100161431 isoform 2
[Acyrthosiphon pisum]
gi|328702096|ref|XP_001944651.2| PREDICTED: hypothetical protein LOC100161431 isoform 1
[Acyrthosiphon pisum]
Length = 657
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 25/190 (13%)
Query: 37 IIGPEDTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVT 91
+ G D +Y + L P G+IIG+GGE + QL+ +T +KI++ +T PG+ ERV
Sbjct: 188 VAGNSDGMYHMKILIPCITAGAIIGKGGETIAQLQTETNTKIKMSKTNDFYPGTTERVCI 247
Query: 92 VYSASDE--TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSD 149
+ +S E A + + DA +V + GD +D QV K+L+P+
Sbjct: 248 ISGSSSEHIMAALTFIMERIREKPDASNRVQN-------SGDAIADREKQV--KILIPNS 298
Query: 150 QIGCVIGKGGQIVQNIRSETGAQIRI---LKDEHLPSCALRSDELVQISGEASVVKKALC 206
G +IGK G ++ ++ ++G ++I KD L + + +SG KK
Sbjct: 299 TAGMIIGKAGAYIKQLKEDSGCFVQISQKAKDTTL------QERCITVSGNTEGNKKVCL 352
Query: 207 QIASRLHDNP 216
I +++ ++P
Sbjct: 353 CILNKIIEDP 362
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 90/194 (46%), Gaps = 22/194 (11%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKEF 338
+ ++++ P G +IGKGG I Q++ E+ IK+ ++ T C+I+ SS E
Sbjct: 196 YHMKILIPCITAGAIIGKGGETIAQLQTETNTKIKMSKTNDFYPGTTERVCIISGSSSEH 255
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGLIS---FTTRLLVPTSRIGCLIGKGGSIITEM 395
L+ +E +R +P S +++ I+ ++L+P S G +IGK G+ I ++
Sbjct: 256 IMAALTFIMER-IREKPDASNRVQNSGDAIADREKQVKILIPNSTAGMIIGKAGAYIKQL 314
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL----------RAN 445
+ + ++I K K + + + +SG+ + K + ++ ++ +
Sbjct: 315 KEDSGCFVQISQKA---KDTTLQERCITVSGNTEGNKKVCLCILNKIIEDPLSASCPNLS 371
Query: 446 LFDREGAVSTFVPV 459
D G V+ F P
Sbjct: 372 YADVNGPVANFNPT 385
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 104/254 (40%), Gaps = 75/254 (29%)
Query: 111 PAQDALFKVH-DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSET 169
P QD L + R + + G+ SDG + + K+L+P G +IGKGG+ + +++ET
Sbjct: 170 PLQDTLDGTNVKRTHSSSVAGN--SDGMYHM--KILIPCITAGAIIGKGGETIAQLQTET 225
Query: 170 GAQIRILK-DEHLPSCALRSDELVQISGEASV-VKKALCQIASRLHDNPSRSQHLLASAI 227
+I++ K ++ P ++ + ISG +S + AL I R+ + P S + S
Sbjct: 226 NTKIKMSKTNDFYPG---TTERVCIISGSSSEHIMAALTFIMERIREKPDASNRVQNSG- 281
Query: 228 SNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLR 287
D ++ +E ++
Sbjct: 282 -------------------------------------------------DAIADREKQVK 292
Query: 288 LVCPVANIGGVIGKGGAIINQIRQESGAAIKVD---------------SSSTEGDDCLIT 332
++ P + G +IGK GA I Q++++SG +++ S +TEG+ +
Sbjct: 293 ILIPNSTAGMIIGKAGAYIKQLKEDSGCFVQISQKAKDTTLQERCITVSGNTEGNKKVCL 352
Query: 333 VSSKEFFEDTLSAT 346
+ ED LSA+
Sbjct: 353 CILNKIIEDPLSAS 366
>gi|256078989|ref|XP_002575774.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043995|emb|CCD81541.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 530
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 36/185 (19%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA-------- 101
P R +G +IG+GGE + QL+ DT+ K++I + G+ ER VT+ + +
Sbjct: 106 PDRYVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQIDHAKQMIGDI 163
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
E K +P A + G T +++VP + G VIGK G+
Sbjct: 164 IERAGKNGTPTTPAY-----------------NSTGSITTIEMMVPGLKAGLVIGKNGET 206
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA----LCQIASRLHDNPS 217
++N++ E G ++ +++ + P+ D+ ++ISGE + V+KA L I SR D P
Sbjct: 207 IKNLQEENGVKMVLIQQSNNPTP---EDKPLRISGEPARVEKARQAVLVLINSR--DRPG 261
Query: 218 RSQHL 222
S H
Sbjct: 262 GSMHY 266
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 111/287 (38%), Gaps = 81/287 (28%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+ +S G VT + +P +G VIGKGG+ + ++++T +++I S A +
Sbjct: 90 NNNSVGSRVVTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQI-------SQAGTPER 142
Query: 191 LVQISGEASVV---KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIV 247
V ++G + K+ + I R N + + +++S+GS+
Sbjct: 143 TVTLTGTPQQIDHAKQMIGDIIERAGKN--------GTPTTPAYNSTGSIT--------- 185
Query: 248 GIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
++ ++ P G VIGK G I
Sbjct: 186 -------------------------------------TIEMMVPGLKAGLVIGKNGETIK 208
Query: 308 QIRQESGAA---IKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERD 364
+++E+G I+ ++ T D L E A + V + R +R
Sbjct: 209 NLQEENGVKMVLIQQSNNPTPEDKPLRISGEPARVEKARQAVL---VLINSR-----DRP 260
Query: 365 SGLISF------TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
G + + T++ VP + G +IGKGG I E+ R++ A++ I
Sbjct: 261 GGSMHYGYDGQETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEI 307
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI--GETVPGSEERVVTVYSASDETN 100
T + P K G +IG+ GE +K L+ + K+ + P E++ + + S E
Sbjct: 185 TTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPEDKPLRI---SGEPA 241
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E + V L DR G DG Q T++ VP+++ G VIGKGG+
Sbjct: 242 RVEKARQAVL----VLINSRDRPGGSMHYG---YDG--QETSQYAVPAEKAGLVIGKGGE 292
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR 211
++ I +GA + I K E P +++ + + G +++A+ I+ R
Sbjct: 293 SIKEICRVSGAHVEISK-EPPPDPSIK---IFNVRGNRQEIEQAIRMISER 339
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 80/181 (44%), Gaps = 17/181 (9%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS-- 334
+ + S+ + P +G VIGKGG I Q++ ++ +++ + T +T +
Sbjct: 92 NSVGSRVVTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQISQAGTPERTVTLTGTPQ 151
Query: 335 ----SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGS 390
+K+ D + + P + +G I+ T ++VP + G +IGK G
Sbjct: 152 QIDHAKQMIGDIIERAGKNGTPTTPAYN-----STGSIT-TIEMMVPGLKAGLVIGKNGE 205
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDRE 450
I ++ + ++ + N P + +D+ ++ISG+ + A V+ + N DR
Sbjct: 206 TIKNLQEENGVKMVLIQQSNNP---TPEDKPLRISGEPARVEKARQAVLVLI--NSRDRP 260
Query: 451 G 451
G
Sbjct: 261 G 261
>gi|449473856|ref|XP_004186185.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC) binding protein 4
[Taeniopygia guttata]
Length = 245
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 26/176 (14%)
Query: 40 PEDT------VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTV 92
PE+T R L ++IGSIIG+ GE VK++R + ++I I E + P ER+ T+
Sbjct: 14 PEETELSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSTARITISEGSCP---ERITTI 70
Query: 93 YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIG 152
++D F + + A FK+ + + A GD S G VT +L++P+ Q G
Sbjct: 71 TGSTDAV--------FRAVSMIA-FKLEEDLGAG---GDGVSAGRAPVTLRLVIPASQCG 118
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI 208
+IGK G ++ IR TGAQ+++ D LP+ R+ V +SG + + + QI
Sbjct: 119 SLIGKAGAKIREIRESTGAQVQVAGD-LLPNSTERA---VTVSGVPDTIIQCVRQI 170
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 13/122 (10%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
+LRLV P + G +IGK GA I +IR+ +GA ++V GD L+ S++ T+
Sbjct: 106 VTLRLVIPASQCGSLIGKAGAKIREIRESTGAQVQV-----AGD--LLPNSTERAV--TV 156
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
S + +++ C +I D S + LVP IGC+IG+ GS I+E+R+++ A+I
Sbjct: 157 SGVPDTIIQ----CVRQICLDPSSQSSSQEFLVPNDLIGCIIGRHGSKISEIRQMSGAHI 212
Query: 404 RI 405
+I
Sbjct: 213 KI 214
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 21/149 (14%)
Query: 266 DWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE 325
D + + +P + S +LR++ IG +IGK G + +IR++S A I + S
Sbjct: 5 DGASGVGGSPEETELSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSTARITISEGS-- 62
Query: 326 GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERD---------SGLISFTTRLLV 376
C ++ T++ + +AV R + K+E D +G T RL++
Sbjct: 63 ---CPERIT-------TITGSTDAVFRAVSMIAFKLEEDLGAGGDGVSAGRAPVTLRLVI 112
Query: 377 PTSRIGCLIGKGGSIITEMRRLTKANIRI 405
P S+ G LIGK G+ I E+R T A +++
Sbjct: 113 PASQCGSLIGKAGAKIREIRESTGAQVQV 141
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 26/147 (17%)
Query: 30 GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEER 88
G D G R + P + GS+IG+ G ++++R T +++++ G+ +P S ER
Sbjct: 93 GAGGDGVSAGRAPVTLRLVIPASQCGSLIGKAGAKIREIRESTGAQVQVAGDLLPNSTER 152
Query: 89 VVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPS 148
VTV S D + + ++ D S Q + LVP+
Sbjct: 153 AVTV-----------------SGVPDTIIQCVRQICL-----DPSSQSSSQ---EFLVPN 187
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRI 175
D IGC+IG+ G + IR +GA I+I
Sbjct: 188 DLIGCIIGRHGSKISEIRQMSGAHIKI 214
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 27/216 (12%)
Query: 132 EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
E+++ +T ++L+ +IG +IGK G+ V+ IR ++ A+I I + SC R +
Sbjct: 15 EETELSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSTARITISEG----SCPER---I 67
Query: 192 VQISGEASVVKKALCQIASRLH-------DNPSRSQHLLASAISNSHSSSGSLVGPTAAT 244
I+G V +A+ IA +L D S + + + S GSL+G A
Sbjct: 68 TTITGSTDAVFRAVSMIAFKLEEDLGAGGDGVSAGRAPVTLRLVIPASQCGSLIGKAGAK 127
Query: 245 ---------PIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD---DLSSKEFSLRLVCPV 292
V +A + P + T ++ R D SS+ S + P
Sbjct: 128 IREIRESTGAQVQVAGDLLPNSTERAVTVSGVPDTIIQCVRQICLDPSSQSSSQEFLVPN 187
Query: 293 ANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
IG +IG+ G+ I++IRQ SGA IK+ + TEG
Sbjct: 188 DLIGCIIGRHGSKISEIRQMSGAHIKI-GNQTEGSS 222
>gi|358368755|dbj|GAA85371.1| KH domain RNA-binding protein [Aspergillus kawachii IFO 4308]
Length = 360
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 133/292 (45%), Gaps = 40/292 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + ++ G IIG+ G+ V LR +T K + + VPG +RV+TV T
Sbjct: 46 RAIVSSKEAGIIIGKSGKNVADLRDETGVKAGVSKVVPGVHDRVLTV------TGPLNGT 99
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ + L + ++ + G ++G H V +LL+ +Q+G +IG+ G +++I
Sbjct: 100 ARAYALVAKGLLEGAPQM---GMGGIVSNNGTHPV--RLLISHNQMGTIIGRQGLKIKHI 154
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH--LL 223
+ +G ++ + + E LP R +V++ G ++KA+ +I L D+ R L
Sbjct: 155 QDASGVRM-VAQKEMLPQSTER---IVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILY 210
Query: 224 ASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY-----GGYKGDTAGDWSRSLYSAPRDD 278
A+ +S G+ + VG PY G D +G + R S P D
Sbjct: 211 NPAV---RASVGTTPSTSTMNQSVGNGYNSRPYNRTGNGADFSDQSGGYGRR--SNP--D 263
Query: 279 LSSKEFSL-----------RLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S++ + L + P +G +IG+GG+ I +IR+ SGA I +
Sbjct: 264 TSNRGYPLVTEDGEEIQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISI 315
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
DG T + +P+D +GC+IG+GG + IR +GA+I I K H + + + I
Sbjct: 275 DGEEIQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKAPHDET----GERMFTI 330
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHL 222
G A +KAL + L +R L
Sbjct: 331 MGSAQANEKALYLLYENLEAEKTRRSQL 358
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
T + +P +GC+IG+GGS ITE+RR + A I I
Sbjct: 281 TQNISIPADMVGCIIGRGGSKITEIRRSSGARISI 315
>gi|345495410|ref|XP_001602171.2| PREDICTED: hypothetical protein LOC100118119 [Nasonia vitripennis]
Length = 533
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 33 RDQFIIGPEDTVY-RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEER 88
R + G + T + + L P G+IIG+GGE + QL+ DT +++++ ++ PG+ ER
Sbjct: 34 RSHYGTGGDGTYHLKVLVPGVAAGAIIGKGGETIAQLQKDTGARVKMSKSHDFYPGTTER 93
Query: 89 VVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPS 148
V + + D A D F+ + + + G ++ QV K+LVP+
Sbjct: 94 VCLITGSVDAIMAVMD---FIMEKIREKPDLTTKTTVDFDSGKATAERDKQV--KILVPN 148
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRI---LKDEHLPSCALRSDELVQISGEASVVKKAL 205
G +IGK G ++ I+ E+G+ ++I KD L + + + GE + AL
Sbjct: 149 STAGMIIGKAGNYIKQIKEESGSYVQISQKAKDVSL------QERCITVIGEKENNRNAL 202
Query: 206 CQIASRLHDNP 216
I +++ D+P
Sbjct: 203 LMILAKVADDP 213
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 36/218 (16%)
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS-- 322
G RS Y D + L+++ P G +IGKGG I Q+++++GA +K+ S
Sbjct: 30 GATKRSHYGTGGDG----TYHLKVLVPGVAAGAIIGKGGETIAQLQKDTGARVKMSKSHD 85
Query: 323 ---STEGDDCLITVSSKEFFEDTLSATIEAV---VRLQPRCSEK--IERDSGLISF---- 370
T CLIT S D + A ++ + +R +P + K ++ DSG +
Sbjct: 86 FYPGTTERVCLITGSV-----DAIMAVMDFIMEKIREKPDLTTKTTVDFDSGKATAERDK 140
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
++LVP S G +IGK G+ I +++ + + ++I K K S + + + G+ +
Sbjct: 141 QVKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKA---KDVSLQERCITVIGEKEN 197
Query: 431 AKDALIQVMTR----------LRANLFDREGAVSTFVP 458
++AL+ ++ + L + D G V+ + P
Sbjct: 198 NRNALLMILAKVADDPQSGTCLNVSYADVSGPVANYNP 235
>gi|402594179|gb|EJW88105.1| KH domain-containing protein [Wuchereria bancrofti]
Length = 581
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 152/372 (40%), Gaps = 79/372 (21%)
Query: 54 IGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQ 113
+G++IGRGGE + Q++ T ++++ G+ R T+ + D+ +
Sbjct: 46 LGNVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQGSKMSV------DRARAMIN 99
Query: 114 DALFKVHDRVI---AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+ + + +R A G G Q+T ++ +P + G VIGKGG+ ++NI+ +TG
Sbjct: 100 EVIARAGNRPPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTG 159
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS 230
++ ++++ + ++I+G+ V+ A + L SR H
Sbjct: 160 VKMVMIQENQESGGQPKP---LRITGDPEKVENARRMVEEILQ---SREDH--------- 204
Query: 231 HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVC 290
P + G G + G S PR
Sbjct: 205 -------------------PPGHFGFPGSFGISGGQRSIGEVIVPR-------------- 231
Query: 291 PVANIGGVIGKGGAIINQIRQESGAAI--KVDSSSTEGDDCLITVSSKEFFEDTLSATIE 348
A++G +IGKGG I ++ ESGA I K D T + C + + T E
Sbjct: 232 --ASVGMIIGKGGETIKRLAAESGAKIQFKPDDDQTAQERCAV-----------IQGTAE 278
Query: 349 AVVRLQPRCSEKIERD---SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+ + SE +++ G F + VP+++ G +IGKGG I ++ + A++ +
Sbjct: 279 QIAKATQFISELVKKSGAAGGAEMF--YMHVPSNKTGLVIGKGGETIKQICAESGAHVEL 336
Query: 406 LPKENLPKIASE 417
+ P ASE
Sbjct: 337 --SRDPPPNASE 346
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 77/160 (48%), Gaps = 24/160 (15%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
DH P + G I G + ++ + P +G IIG+GGE +K+L ++ +KI+
Sbjct: 203 DHPPGHFGFPGSFG---ISGGQRSIGEVIVPRASVGMIIGKGGETIKRLAAESGAKIQFK 259
Query: 80 -ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH 138
+ ++ER + +++ +F+S EL + GG
Sbjct: 260 PDDDQTAQERCAVIQGTAEQ---IAKATQFIS----------------ELVKKSGAAGGA 300
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD 178
++ + VPS++ G VIGKGG+ ++ I +E+GA + + +D
Sbjct: 301 EMF-YMHVPSNKTGLVIGKGGETIKQICAESGAHVELSRD 339
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRL- 353
+G VIG+GG I+QI+ ++ +++ S + T+ + D A I V+
Sbjct: 46 LGNVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQGSKMSVDRARAMINEVIARA 105
Query: 354 --QPRCSEKIERDSGLISFTTR-----LLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
+P + D G+ T R + +P ++ G +IGKGG I ++ T + ++
Sbjct: 106 GNRPPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKM-VM 164
Query: 407 PKENLPKIASEDDEMVQISGDLDLAKDA 434
+EN + + + ++I+GD + ++A
Sbjct: 165 IQEN--QESGGQPKPLRITGDPEKVENA 190
>gi|351697928|gb|EHB00847.1| RNA-binding protein Nova-2 [Heterocephalus glaber]
Length = 320
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 10/171 (5%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 29 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 88
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 89 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 145
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
V+ + ++GA +++ + P + +V +SGE V KA+ I +L
Sbjct: 146 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKL 193
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 117/275 (42%), Gaps = 65/275 (23%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
K+L+PS G +IGKGGQ + ++ ETGA I++ K + LVQ G A +
Sbjct: 29 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ--GTAEALN 86
Query: 203 KALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD 262
IA ++ + P Q + + N ++ P D
Sbjct: 87 AVHSFIAEKVREIP---QAMTKPEVVN----------------------ILQPQTTMNPD 121
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
A +L+ P + G +IGKGGA + + ++SGA +++ S
Sbjct: 122 RAKQ-------------------AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL-SQ 161
Query: 323 STEG---DDCLITVSSK-EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPT 378
EG + ++TVS + E +SA ++ +L ++++ + VP
Sbjct: 162 KPEGINLQERVVTVSGEPEQVHKAVSAIVQ---KLAAESAKEL----------VEIAVPE 208
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPK-ENLP 412
+ +G ++GKGG + E + LT A I+I K E LP
Sbjct: 209 NLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP 243
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 88/177 (49%), Gaps = 19/177 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 25 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 84
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 85 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 142
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRAN 445
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +L A
Sbjct: 143 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKLAAE 196
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 33/185 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPG--SEERVVTVYSASDETNAFE 103
+ + P G IIG+GG VK + + + +++ + G +ERVVTV ++
Sbjct: 127 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQ----- 181
Query: 104 DGDKFVSPAQDALFKVHDRV--IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
VH V I ++L + + ++ VP + +G ++GKGG+
Sbjct: 182 ---------------VHKAVSAIVQKLAAESAKE-----LVEIAVPENLVGAILGKGGKT 221
Query: 162 VQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
+ + TGA+I+I K E LP R V I+G + + A I+ R+ Q
Sbjct: 222 LVEYQELTGARIQISKKGEFLPGTRNRR---VTITGSPAATQAAQYLISQRVTYEQGVFQ 278
Query: 221 HLLAS 225
LL S
Sbjct: 279 TLLFS 283
>gi|348521966|ref|XP_003448497.1| PREDICTED: far upstream element-binding protein 1 [Oreochromis
niloticus]
Length = 631
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 156/403 (38%), Gaps = 88/403 (21%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P T + P +G IIGRGGE + +L+ ++ KI+I G +R VT+ +
Sbjct: 85 PRSTSEEFKVPDGMVGFIIGRGGEQISRLQQESGCKIQIAPDSGGMPDRSVTLTGLPES- 143
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+ A+ L ++ ++ +DG +++VP+ + G VIGKGG
Sbjct: 144 ---------IQTAKRLLTEIVEK--GRPAPAFHHNDGPGMTVQEIMVPASKAGLVIGKGG 192
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ +++++ G ++ +++D + A D+ ++ISGE V++A + + D R
Sbjct: 193 ETIKSLQERAGVKMVMIQDGPQNTGA---DKPLRISGEPFKVQQAKEMVMELIRDQGFRE 249
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
Q G Y GD
Sbjct: 250 QR-----------------------------------GEYGSRIGGD------------- 261
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV------ 333
SL + P +G VIG+ G +I +I+ ++G I+ D + +
Sbjct: 262 -----SLDVPVPRFAVGIVIGRNGEMIKKIQNDTGVRIQFKPDDGTTPDRIAQIMGPPDQ 316
Query: 334 --SSKEFFEDTLSAT--------IEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGC 383
+ E D L + R + + + + GL FT VPT + G
Sbjct: 317 AQHAAEIISDLLRSVQAGGPPGHGGGRGRGRGQGNWNMGPPGGLQEFT--FTVPTMKTGL 374
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
+IGKGG I + + + A I + + N P A + +M + G
Sbjct: 375 IIGKGGETIKGISQQSGARIEL--QRNPPPNADPNIKMFTVRG 415
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 20/174 (11%)
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
+S+EF + P +G +IG+GG I++++QESG I++ S D +T++
Sbjct: 88 TSEEFKV----PDGMVGFIIGRGGEQISRLQQESGCKIQIAPDSGGMPDRSVTLTG---- 139
Query: 340 EDTLSATIEAVVRL------QPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
L +I+ RL + R + + G ++VP S+ G +IGKGG I
Sbjct: 140 ---LPESIQTAKRLLTEIVEKGRPAPAFHHNDGPGMTVQEIMVPASKAGLVIGKGGETIK 196
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
++ +A ++++ ++ P+ D + +ISG+ + A VM +R F
Sbjct: 197 SLQE--RAGVKMVMIQDGPQNTGADKPL-RISGEPFKVQQAKEMVMELIRDQGF 247
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 117/304 (38%), Gaps = 71/304 (23%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
GP TV + P K G +IG+GGE +K L+ K+ V +
Sbjct: 169 GPGMTVQEIMVPASKAGLVIGKGGETIKSLQERAGVKM-------------VMIQDGPQN 215
Query: 99 TNAFE----DGDKF-VSPAQDALFKVHDRVIAEELRGDEDSD-GGHQVTAKLLVPSDQIG 152
T A + G+ F V A++ + ++ E RG+ S GG + + VP +G
Sbjct: 216 TGADKPLRISGEPFKVQQAKEMVMELIRDQGFREQRGEYGSRIGGDSL--DVPVPRFAVG 273
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
VIG+ G++++ I+++TG +I+ D+ D + QI G
Sbjct: 274 IVIGRNGEMIKKIQNDTGVRIQFKPDD-----GTTPDRIAQIMGP--------------- 313
Query: 213 HDNPSRSQH---LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
P ++QH +++ + + + G MGP GG
Sbjct: 314 ---PDQAQHAAEIISDLLRSVQAGGPPGHGGGRGRGRGQGNWNMGPPGGL---------- 360
Query: 270 SLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDC 329
+EF+ P G +IGKGG I I Q+SGA I++ + D
Sbjct: 361 ------------QEFT--FTVPTMKTGLIIGKGGETIKGISQQSGARIELQRNPPPNADP 406
Query: 330 LITV 333
I +
Sbjct: 407 NIKM 410
>gi|256078997|ref|XP_002575778.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043991|emb|CCD81537.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 373
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA-------- 101
P R +G +IG+GGE + QL+ DT+ K++I + G+ ER VT+ + +
Sbjct: 106 PDRYVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQIDHAKQMIGDI 163
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
E K +P A + G T +++VP + G VIGK G+
Sbjct: 164 IERAGKNGTPTTPAY-----------------NSTGSITTIEMMVPGLKAGLVIGKNGET 206
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA----LCQIASRLHDNPS 217
++N++ E G ++ +++ + P+ D+ ++ISGE + V+KA L I SR D P
Sbjct: 207 IKNLQEENGVKMVLIQQSNNPTP---EDKPLRISGEPARVEKARQAVLVLINSR--DRPG 261
Query: 218 RSQH 221
S H
Sbjct: 262 GSMH 265
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 111/287 (38%), Gaps = 81/287 (28%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+ +S G VT + +P +G VIGKGG+ + ++++T +++I S A +
Sbjct: 90 NNNSVGSRVVTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQI-------SQAGTPER 142
Query: 191 LVQISGEASVV---KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIV 247
V ++G + K+ + I R N + + +++S+GS+
Sbjct: 143 TVTLTGTPQQIDHAKQMIGDIIERAGKN--------GTPTTPAYNSTGSIT--------- 185
Query: 248 GIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
++ ++ P G VIGK G I
Sbjct: 186 -------------------------------------TIEMMVPGLKAGLVIGKNGETIK 208
Query: 308 QIRQESGAA---IKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERD 364
+++E+G I+ ++ T D L E A + V + R +R
Sbjct: 209 NLQEENGVKMVLIQQSNNPTPEDKPLRISGEPARVEKARQAVL---VLINSR-----DRP 260
Query: 365 SGLISF------TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
G + + T++ VP + G +IGKGG I E+ R++ A++ I
Sbjct: 261 GGSMHYGYDGQETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEI 307
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T + P K G +IG+ GE +K L+ + K+ V + +++ T
Sbjct: 185 TTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKM-------------VLIQQSNNPTP-- 229
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH-------QVTAKLLVPSDQIGCVI 155
ED +S + K V+ L D GG Q T++ VP+++ G VI
Sbjct: 230 EDKPLRISGEPARVEKARQAVLV--LINSRDRPGGSMHYGYDGQETSQYAVPAEKAGLVI 287
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR 211
GKGG+ ++ I +GA + I K E P +++ + + G +++A+ I+ R
Sbjct: 288 GKGGESIKEICRVSGAHVEISK-EPPPDPSIK---IFNVRGNRQEIEQAIRMISER 339
>gi|313239007|emb|CBY13992.1| unnamed protein product [Oikopleura dioica]
Length = 386
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 36/189 (19%)
Query: 40 PEDTVY-RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
P D ++ R+L P + G+IIGRGG ++ LR + ++ I I E + ERV+ + S E
Sbjct: 92 PSDKIWCRFLIPSKVAGAIIGRGGATIRALREEYQAIINIPEAR--APERVLKICVNSRE 149
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRV--IAEELRGDEDSDGGH-------QVTAKLLVPSD 149
T +H V IAE L+ +E++ G H + ++LV S
Sbjct: 150 T-------------------LHTIVSQIAEILK-NENAKGSHNGRRKEGETELRILVQSS 189
Query: 150 QIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA 209
Q G +IG G V+N+R TG++I I + C S+ + I G + V K + I
Sbjct: 190 QAGAIIGTKGSTVKNLRETTGSRININPE----CCPNSSERVAAIMGPPATVVKCISMIY 245
Query: 210 SRLHDNPSR 218
L P++
Sbjct: 246 DILERVPAK 254
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 2/122 (1%)
Query: 287 RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSAT 346
R + P G +IG+GGA I +R+E A I + + I V+S+E +S
Sbjct: 99 RFLIPSKVAGAIIGRGGATIRALREEYQAIINIPEARAPERVLKICVNSRETLHTIVSQI 158
Query: 347 IEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
E + + S R G R+LV +S+ G +IG GS + +R T + I I
Sbjct: 159 AEILKNENAKGSHNGRRKEGETEL--RILVQSSQAGAIIGTKGSTVKNLRETTGSRININ 216
Query: 407 PK 408
P+
Sbjct: 217 PE 218
>gi|308798891|ref|XP_003074225.1| putative nucleic acid binding protein (ISS) [Ostreococcus tauri]
gi|116000397|emb|CAL50077.1| putative nucleic acid binding protein (ISS) [Ostreococcus tauri]
Length = 402
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 111/250 (44%), Gaps = 47/250 (18%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYS-----ASDE 98
V+R LC ++G +IGR G+ V+ + +T +++++ + ER V +++ +
Sbjct: 17 VFRVLCAETRVGGLIGRQGKRVRGIVTETGAQVKVLASTARCHERAVLIFAPRARDGPGD 76
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEE------------------------LRGDEDS 134
T A +G + V + R + E+ + G +
Sbjct: 77 TCAAREGARRV-----VRYLTRARAVTEDECDGARDESEDESDDDDDGRRGDGVGGQDLG 131
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSE-TGAQIRILKDEHLPSCALRSDELVQ 193
VT +LLVP+ Q G +IGKGG+ +Q +R GA + + + +P CA D +V+
Sbjct: 132 RSTAHVTLRLLVPAGQAGHLIGKGGENIQEVRKRANGAHVAVQEVGQVPPCATSEDRVVE 191
Query: 194 ISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSH-----SSSGSLVGPTAATPI-V 247
I G+ V+ A + L D +L+ S++ + + +G+ VG AT + +
Sbjct: 192 IHGKPKDVRVAADAVFESLKD------YLVDSSVLGHYQPTVAAPAGANVGDVGATAMGI 245
Query: 248 GIAPLMGPYG 257
G P+ P G
Sbjct: 246 GNHPMSAPMG 255
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 39/191 (20%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV---SSKEFFEDT 342
R++C +GG+IG+ G + I E+GA +KV +S+ + + + +++ DT
Sbjct: 18 FRVLCAETRVGGLIGRQGKRVRGIVTETGAQVKVLASTARCHERAVLIFAPRARDGPGDT 77
Query: 343 LSATIEA--VVRLQPRCSEKIE----------------------------RDSG--LISF 370
+A A VVR R E +D G
Sbjct: 78 CAAREGARRVVRYLTRARAVTEDECDGARDESEDESDDDDDGRRGDGVGGQDLGRSTAHV 137
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMR-RLTKANIRILPKENLPKIASEDDEMVQISG--- 426
T RLLVP + G LIGKGG I E+R R A++ + +P A+ +D +V+I G
Sbjct: 138 TLRLLVPAGQAGHLIGKGGENIQEVRKRANGAHVAVQEVGQVPPCATSEDRVVEIHGKPK 197
Query: 427 DLDLAKDALIQ 437
D+ +A DA+ +
Sbjct: 198 DVRVAADAVFE 208
>gi|313228809|emb|CBY17960.1| unnamed protein product [Oikopleura dioica]
Length = 471
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 32/213 (15%)
Query: 10 KRSHSQTDYADHGPNKRRYT----GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
KR H Q D KR G RD+ +G +R+L P + G++IG+GG +
Sbjct: 105 KRGHGQDSQGDF---KRSRPSGGYGQKRDEPGVG-----HRFLIPSKMAGAVIGKGGTTI 156
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIA 125
K LR D ++ + + ERV+ D VSP + + + +
Sbjct: 157 KSLRSDFACQLNVPDAQ--GPERVLRFVCE----------DSNVSPLIEKVGNLLRNDMV 204
Query: 126 EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
E R DSD + ++LV + G VIG G+ ++ +R +TG +I + +D
Sbjct: 205 ERNRAQADSD----IDMRMLVHQSKAGAVIGFKGETIKGLRDKTGCKINVYQD----PAP 256
Query: 186 LRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
SD L++++G+ + +I L+D P +
Sbjct: 257 HSSDRLIKVAGQPDKIATCFGEILLILNDIPPK 289
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 90/211 (42%), Gaps = 25/211 (11%)
Query: 258 GYKGDTAGDWSRSL----YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQES 313
G+ D+ GD+ RS Y RD+ R + P G VIGKGG I +R +
Sbjct: 107 GHGQDSQGDFKRSRPSGGYGQKRDEPG---VGHRFLIPSKMAGAVIGKGGTTIKSLRSD- 162
Query: 314 GAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLI--SFT 371
A +++ +G + ++ + + +S IE V L ++ +ER+
Sbjct: 163 -FACQLNVPDAQGPERVLRFVCE---DSNVSPLIEKVGNL--LRNDMVERNRAQADSDID 216
Query: 372 TRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL------PKENLPKIASEDDEMVQIS 425
R+LV S+ G +IG G I +R T I + + L K+A + D++
Sbjct: 217 MRMLVHQSKAGAVIGFKGETIKGLRDKTGCKINVYQDPAPHSSDRLIKVAGQPDKIATCF 276
Query: 426 GDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
G++ L L + + FD E A STF
Sbjct: 277 GEILL---ILNDIPPKGFVQEFDPENADSTF 304
>gi|414586732|tpg|DAA37303.1| TPA: hypothetical protein ZEAMMB73_623211 [Zea mays]
Length = 322
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 33/228 (14%)
Query: 48 LCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDK 107
L P +K+G+IIG GE V++L +T++ +RI E+ V ++ E D+
Sbjct: 2 LIPAQKVGAIIGHKGERVRRLCEETRACVRIIGGHLCEAEQAVIIFGR-------EQLDE 54
Query: 108 FVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRS 167
+ PA DAL +V+ + I + D + + ++L PS+Q +IG+ G ++ +I
Sbjct: 55 PLPPAMDALLRVYQQTINND---SLDVGPDNVIVRQILAPSEQAASLIGEHGVMINSIME 111
Query: 168 ETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAI 227
+ IR+L +E LPS ++ L I PS + L
Sbjct: 112 ASQTVIRVLGNE-LPS---------------DLIDTLLKWI-------PSNDEELRLRLS 148
Query: 228 SNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S S ++ + V A+ P+ AP +G + ++ G + ++Y P
Sbjct: 149 SRSTATPHASVAAFASAPVSHTAPWLGKFIAFEPFNVGGFDWAIYFYP 196
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 66/143 (46%), Gaps = 9/143 (6%)
Query: 288 LVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATI 347
++ P +G +IG G + ++ +E+ A +++ + + + +E ++ L +
Sbjct: 1 MLIPAQKVGAIIGHKGERVRRLCEETRACVRIIGGHLCEAEQAVIIFGREQLDEPLPPAM 60
Query: 348 EAVVRLQPRCSEKIERDSGLISFTTR-LLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
+A++R+ + D G + R +L P+ + LIG+ G +I + ++ IR+L
Sbjct: 61 DALLRVYQQTINNDSLDVGPDNVIVRQILAPSEQAASLIGEHGVMINSIMEASQTVIRVL 120
Query: 407 PKE--------NLPKIASEDDEM 421
E L I S D+E+
Sbjct: 121 GNELPSDLIDTLLKWIPSNDEEL 143
>gi|391348567|ref|XP_003748518.1| PREDICTED: poly(rC)-binding protein 3-like [Metaseiulus
occidentalis]
Length = 418
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 85/170 (50%), Gaps = 13/170 (7%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ G+ +K+ R D+ +KI I + T P ER+VTV + T +
Sbjct: 21 KEVGSIIGKKGDNIKKFREDSGAKINISDGTCP---ERIVTV---TGSTECILKAFSLIC 74
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDG--GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSE 168
+ + + L G + G VT +L+VP+ Q G +IGK G ++ IR
Sbjct: 75 AKFEEMSSLSGSPTESALNGQKVLPGQTPPPVTLRLIVPASQCGSLIGKAGSKIREIREI 134
Query: 169 TGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
TGA +++ E LP+ R+ V ++G A V K + QI + + P +
Sbjct: 135 TGASVQV-ASEMLPNSTERT---VTVAGTADAVTKCIYQICCVMLECPPK 180
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 12/169 (7%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
+ S ++R++ +G +IGK G I + R++SGA I + + +T S++
Sbjct: 6 NTPSVTLTVRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISDGTCPERIVTVTGSTEC 65
Query: 338 FFE--DTLSATIEAVVRLQPRCSE------KIERDSGLISFTTRLLVPTSRIGCLIGKGG 389
+ + A E + L +E K+ T RL+VP S+ G LIGK G
Sbjct: 66 ILKAFSLICAKFEEMSSLSGSPTESALNGQKVLPGQTPPPVTLRLIVPASQCGSLIGKAG 125
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
S I E+R +T A++++ E LP + + V ++G D + Q+
Sbjct: 126 SKIREIREITGASVQVA-SEMLP---NSTERTVTVAGTADAVTKCIYQI 170
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 50/182 (27%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T ++++ ++G +IGK G ++ R ++GA+I I D P + +V ++G
Sbjct: 12 LTVRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINI-SDGTCP------ERIVTVTGSTE 64
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I ++ + S S SA+ +G V P P V
Sbjct: 65 CILKAFSLICAKFEEMSSLSGSPTESAL------NGQKVLPGQTPPPV------------ 106
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+LRL+ P + G +IGK G+ I +IR+ +GA+++V
Sbjct: 107 -------------------------TLRLIVPASQCGSLIGKAGSKIREIREITGASVQV 141
Query: 320 DS 321
S
Sbjct: 142 AS 143
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 44/94 (46%), Gaps = 14/94 (14%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T ++ +P+D IGCVIGKGGQ + IR +GA I+I E + V ISG
Sbjct: 306 TQEMQIPNDLIGCVIGKGGQKINEIRQLSGATIKISSTEE-----GSKERCVSISGTPEA 360
Query: 201 VKKALCQI---------ASRLHDNPSRSQHLLAS 225
+ A I ASRL N R + AS
Sbjct: 361 INLAQYLINTRQVSLRKASRLQSNHRRDPSVSAS 394
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK-------EFFEDTLSATI 347
IG VIGKGG IN+IRQ SGA IK+ S+ + +++S ++ +T ++
Sbjct: 316 IGCVIGKGGQKINEIRQLSGATIKISSTEEGSKERCVSISGTPEAINLAQYLINTRQVSL 375
Query: 348 EAVVRLQ 354
RLQ
Sbjct: 376 RKASRLQ 382
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 369 SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL 428
S T + +P IGC+IGKGG I E+R+L+ A I+I E + V ISG
Sbjct: 304 SSTQEMQIPNDLIGCVIGKGGQKINEIRQLSGATIKISSTEE-----GSKERCVSISGTP 358
Query: 429 DLAKDALIQVMTR 441
+ A + TR
Sbjct: 359 EAINLAQYLINTR 371
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
P R + P + GS+IG+ G ++++R T + +++ E +P S ER VTV +D
Sbjct: 103 PPPVTLRLIVPASQCGSLIGKAGSKIREIREITGASVQVASEMLPNSTERTVTVAGTAD 161
>gi|242019024|ref|XP_002429966.1| polyrC binding protein, putative [Pediculus humanus corporis]
gi|212515021|gb|EEB17228.1| polyrC binding protein, putative [Pediculus humanus corporis]
Length = 319
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 18/190 (9%)
Query: 36 FIIGPEDTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVV 90
+G + VY + L P G+IIG+GGE + QL+ DT +++++ + P + ERV
Sbjct: 59 LFLGGDGIVYHLKILVPCIAAGAIIGKGGETIAQLQKDTGARMKMSKANDFYPCTTERVC 118
Query: 91 TVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDS----DGGHQVTAKLLV 146
V T + E +S D + + D D +S D QV K+L+
Sbjct: 119 LV------TGSVEAIMAVMSFIMDKIKEKPDLTSKAINTSDTESKLSADRSKQV--KILI 170
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALC 206
P+ G +IGKGG ++ ++ E+G+ I++ + + S L+ + V I GE KKA+
Sbjct: 171 PNSTAGMIIGKGGNYIKQMKEESGSYIQLSQKSNDASLQLQ-ERCVTIIGEMENNKKAIL 229
Query: 207 QIASRLHDNP 216
++ +++ ++P
Sbjct: 230 KLLAKVVEDP 239
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 95/207 (45%), Gaps = 45/207 (21%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKEF 338
+ L+++ P G +IGKGG I Q+++++GA +K+ ++ T CL+T
Sbjct: 68 YHLKILVPCIAAGAIIGKGGETIAQLQKDTGARMKMSKANDFYPCTTERVCLVT------ 121
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGLISFT-----------------TRLLVPTSRI 381
++EA++ + +KI+ L S ++L+P S
Sbjct: 122 ------GSVEAIMAVMSFIMDKIKEKPDLTSKAINTSDTESKLSADRSKQVKILIPNSTA 175
Query: 382 GCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTR 441
G +IGKGG+ I +M+ + + I++ K N + + + V I G+++ K A+++++ +
Sbjct: 176 GMIIGKGGNYIKQMKEESGSYIQLSQKSNDASLQLQ-ERCVTIIGEMENNKKAILKLLAK 234
Query: 442 ----------LRANLFDREGAVSTFVP 458
L + D G V+ F P
Sbjct: 235 VVEDPQSGSCLNVSYADIPGPVANFNP 261
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 78/183 (42%), Gaps = 48/183 (26%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
K+LVP G +IGKGG+ + ++ +TGA++++ K C ++ + ++G +
Sbjct: 71 KILVPCIAAGAIIGKGGETIAQLQKDTGARMKMSKANDFYPCT--TERVCLVTGSVEAIM 128
Query: 203 KALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD 262
+ I ++ + P L + AI+ S + S
Sbjct: 129 AVMSFIMDKIKEKP----DLTSKAINTSDTES---------------------------K 157
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
+ D S+ ++++ P + G +IGKGG I Q+++ESG+ I++
Sbjct: 158 LSADRSK---------------QVKILIPNSTAGMIIGKGGNYIKQMKEESGSYIQLSQK 202
Query: 323 STE 325
S +
Sbjct: 203 SND 205
>gi|390177062|ref|XP_003736268.1| GA30025, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388858892|gb|EIM52341.1| GA30025, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 714
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 46/229 (20%)
Query: 255 PYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
P G YK TA W + ++++ P G +IGKGG I +++++G
Sbjct: 225 PLGNYK--TASCWC----------YGETTYHMKILVPAVASGAIIGKGGETIASLQKDTG 272
Query: 315 AAIKVDSSS-----TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI-------- 361
A +K+ S T CLIT S++ + I +R +P + KI
Sbjct: 273 ARVKMSKSHDFYPGTTERVCLITGSTEAIM--VVLDFIMDKIREKPDLTTKIIDAESKQT 330
Query: 362 -ERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE 420
ERD + ++LVP S G +IGKGG+ I +++ + + ++I K PK S +
Sbjct: 331 QERDKQV-----KILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQK---PKDVSLQER 382
Query: 421 MVQISGDLDLAKDALIQVMTR----------LRANLFDREGAVSTFVPV 459
+ I GD + K+A ++++ L + D G V+ F P
Sbjct: 383 CITIIGDKENNKNACKMILSKIVEDPQSGTCLNVSYADVSGPVANFNPT 431
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 91/180 (50%), Gaps = 15/180 (8%)
Query: 42 DTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSAS 96
+T Y + L P G+IIG+GGE + L+ DT +++++ ++ PG+ ERV + ++
Sbjct: 239 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 298
Query: 97 DETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
+ D F+ + ++I E + ++ D QV K+LVP+ G +IG
Sbjct: 299 EAIMVVLD---FIMDKIREKPDLTTKIIDAESKQTQERD--KQV--KILVPNSTAGMIIG 351
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KGG ++ I+ ++G+ ++I + P + + I G+ K A I S++ ++P
Sbjct: 352 KGGAFIKQIKEDSGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIVEDP 408
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/214 (18%), Positives = 85/214 (39%), Gaps = 56/214 (26%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVV 201
K+LVP+ G +IGKGG+ + +++ +TGA++++ K + P R + I+G +
Sbjct: 245 KILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTER---VCLITGSTEAI 301
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
L I ++ + P
Sbjct: 302 MVVLDFIMDKIREKP--------------------------------------------- 316
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D + + A ++ ++++ P + G +IGKGGA I QI+++SG+ +++
Sbjct: 317 ----DLTTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQ 372
Query: 322 SSTE---GDDCLITVSSKEFFEDTLSATIEAVVR 352
+ + C+ + KE ++ + +V
Sbjct: 373 KPKDVSLQERCITIIGDKENNKNACKMILSKIVE 406
>gi|224116388|ref|XP_002317285.1| predicted protein [Populus trichocarpa]
gi|222860350|gb|EEE97897.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 73/113 (64%), Gaps = 7/113 (6%)
Query: 346 TIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+EA++ LQ + +++ + G RLLV + IGC+IGKGGS I E+R+ T A++RI
Sbjct: 2 AVEAILLLQGKINDEDDDTVG-----CRLLVLSKVIGCIIGKGGSTINEIRKRTNADVRI 56
Query: 406 LPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF-DREGAVSTFV 457
K P A +DE+V++ G++ +DAL+Q++ RLR ++ +++G +++ V
Sbjct: 57 -SKGAKPNCADSNDELVEVVGEVSSVRDALVQIVLRLRDDVLKEKDGGLNSLV 108
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
DED D V +LLV S IGC+IGKGG + IR T A +RI K P+CA +DE
Sbjct: 15 DEDDD---TVGCRLLVLSKVIGCIIGKGGSTINEIRKRTNADVRISKGAK-PNCADSNDE 70
Query: 191 LVQISGEASVVKKALCQIASRLHDN 215
LV++ GE S V+ AL QI RL D+
Sbjct: 71 LVEVVGEVSSVRDALVQIVLRLRDD 95
>gi|432101641|gb|ELK29690.1| RNA-binding protein Nova-2 [Myotis davidii]
Length = 294
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 10/171 (5%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 44 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 103
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 104 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 160
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
V+ + ++GA +++ + P + +V +SGE V KA+ I +L
Sbjct: 161 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKL 208
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 117/275 (42%), Gaps = 65/275 (23%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
K+L+PS G +IGKGGQ + ++ ETGA I++ K + LVQ G A +
Sbjct: 44 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ--GTAEALN 101
Query: 203 KALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD 262
IA ++ + P Q + + N ++ P D
Sbjct: 102 AVHSFIAEKVREIP---QAMTKPEVVN----------------------ILQPQTTMNPD 136
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
A +L+ P + G +IGKGGA + + ++SGA +++ S
Sbjct: 137 RAKQ-------------------AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL-SQ 176
Query: 323 STEG---DDCLITVSSK-EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPT 378
EG + ++TVS + E +SA ++ +L ++++ + VP
Sbjct: 177 KPEGINLQERVVTVSGEPEQVHKAVSAIVQ---KLAAESAKEL----------VEIAVPE 223
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPK-ENLP 412
+ +G ++GKGG + E + LT A I+I K E LP
Sbjct: 224 NLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP 258
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 88/176 (50%), Gaps = 19/176 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 40 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 99
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 100 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 157
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRA 444
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +L A
Sbjct: 158 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKLAA 210
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 30/142 (21%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPG--SEERVVTVYSASDETNAFE 103
+ + P G IIG+GG VK + + + +++ + G +ERVVTV ++
Sbjct: 142 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQ----- 196
Query: 104 DGDKFVSPAQDALFKVHDRV--IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
VH V I ++L + + ++ VP + +G ++GKGG+
Sbjct: 197 ---------------VHKAVSAIVQKLAAESAKE-----LVEIAVPENLVGAILGKGGKT 236
Query: 162 VQNIRSETGAQIRILKD-EHLP 182
+ + TGA+I+I K E LP
Sbjct: 237 LVEYQELTGARIQISKKGEFLP 258
>gi|257205944|emb|CAX82623.1| putative KH-type splicing regulatory protein [Schistosoma
japonicum]
Length = 513
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 22/189 (11%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
GP P R +G +IG+GGE + QL+ DT+ K++I + G+ ER VT+ +
Sbjct: 72 GPRVVTTETAIPDRFVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQ 129
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGK 157
+ A+ + + +R + G T +++VP + G VIGK
Sbjct: 130 ----------IDHAKQMIGDIIERAGKNGTPTTTTYNSTGSITTIEMMVPGLKAGLVIGK 179
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA----LCQIASRLH 213
G+ ++N++ E G ++ +++ + P+ D+ ++ISGE S V+KA L I SR
Sbjct: 180 NGETIKNLQEENGVKMVLIQQSNNPTP---EDKPLRISGEPSRVEKARQAVLVLINSR-- 234
Query: 214 DNPSRSQHL 222
D P S H
Sbjct: 235 DRPGGSIHY 243
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T + P K G +IG+ GE +K L+ + K+ V + +++ T
Sbjct: 162 TTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKM-------------VLIQQSNNPTP-- 206
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH-------QVTAKLLVPSDQIGCVI 155
ED +S + K V+ L D GG Q T++ VP+++ G VI
Sbjct: 207 EDKPLRISGEPSRVEKARQAVLV--LINSRDRPGGSIHYGYDGQETSQYAVPAEKAGLVI 264
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR 211
GKGG+ ++ I +GA + I K E P +++ + + G +++A+ I+ R
Sbjct: 265 GKGGESIKEICRVSGAHVEISK-EPPPDPSIK---IFNVRGNRQEIEQAIRMISER 316
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 17/130 (13%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAA---IKVDSSSTEGDDCLITVSSKEFFED 341
++ ++ P G VIGK G I +++E+G I+ ++ T D L E
Sbjct: 163 TIEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPEDKPLRISGEPSRVEK 222
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISF------TTRLLVPTSRIGCLIGKGGSIITEM 395
A + V + R +R G I + T++ VP + G +IGKGG I E+
Sbjct: 223 ARQAVL---VLINSR-----DRPGGSIHYGYDGQETSQYAVPAEKAGLVIGKGGESIKEI 274
Query: 396 RRLTKANIRI 405
R++ A++ I
Sbjct: 275 CRVSGAHVEI 284
>gi|449478185|ref|XP_002195336.2| PREDICTED: far upstream element-binding protein 3 [Taeniopygia
guttata]
Length = 558
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 88/158 (55%), Gaps = 15/158 (9%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGD 106
+ P + +G IIGRGGE + +++I++ KI+I G ER V + + E+
Sbjct: 119 FKVPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPERPC-VLTGTPES------- 170
Query: 107 KFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIR 166
+ A+ L ++ DR G + G+ ++L+P+ ++G VIGKGG+ ++ ++
Sbjct: 171 --IEQAKRLLGQIVDR--CRNGPGFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQ 226
Query: 167 SETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
TG ++ +++D LP+ A D+ ++I+G+A V++A
Sbjct: 227 ERTGVKMIMIQDGPLPTGA---DKPLRITGDAFKVQQA 261
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV--DSSSTEGDDCLITVSSKEF 338
++EF + P +G +IG+GG I++I+ ESG I++ DS C++T + E
Sbjct: 116 TEEFKV----PDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPERPCVLT-GTPES 170
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
E + V R R D S +L+P S++G +IGKGG I +++
Sbjct: 171 IEQAKRLLGQIVDRC--RNGPGFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQER 228
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR-ANLFDREGAVSTF 456
T + ++ LP A D+ ++I+GD + A V+ +R + D G S F
Sbjct: 229 TGVKMIMIQDGPLPTGA---DKPLRITGDAFKVQQAREMVLEIIREKDQADFRGVRSDF 284
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 122/291 (41%), Gaps = 59/291 (20%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T+ L P K+G +IG+GGE +KQL+ T K+ + + P + + +D+
Sbjct: 200 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGP--------LPTGADKPLRI 251
Query: 103 EDGDKF-VSPAQDALFKV---HDRVIAEELRGDEDSD-GGHQVTAKLLVPSDQIGCVIGK 157
GD F V A++ + ++ D+ +R D + GG + ++ VP +G VIG+
Sbjct: 252 -TGDAFKVQQAREMVLEIIREKDQADFRGVRSDFSARMGGGSI--EVSVPRYAVGIVIGR 308
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
G++++ I+++ G +I+ D+ + ++ + Q+ G L D
Sbjct: 309 NGEMIKKIQNDAGVRIQFKPDD-----GISTERVAQVMG---------------LPDRCQ 348
Query: 218 RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD 277
+ H+++ I + G G A +G GDWS ++
Sbjct: 349 HAAHIISELILTAQERDG--FGNLAIA-------------RGRGRGRGDWSVGTPGGVQE 393
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P G VIGKGG I I Q+SGA +++ + D
Sbjct: 394 --------ITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTD 436
>gi|257206622|emb|CAX82939.1| KH-type splicing regulatory protein (FUSE binding protein 2)
[Schistosoma japonicum]
Length = 535
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 22/189 (11%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
GP P R +G +IG+GGE + QL+ DT+ K++I + G+ ER VT+ +
Sbjct: 94 GPRVVTTETAIPDRFVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQ 151
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGK 157
+ A+ + + +R + G T +++VP + G VIGK
Sbjct: 152 ----------IDHAKQMIGDIIERAGKNGTPTTTTYNSTGSITTIEMMVPGLKAGLVIGK 201
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA----LCQIASRLH 213
G+ ++N++ E G ++ +++ + P+ D+ ++ISGE S V+KA L I SR
Sbjct: 202 NGETIKNLQEENGVKMVLIQQSNNPTP---EDKPLRISGEPSRVEKARQAVLVLINSR-- 256
Query: 214 DNPSRSQHL 222
D P S H
Sbjct: 257 DRPGGSIHY 265
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T + P K G +IG+ GE +K L+ + K+ V + +++ T
Sbjct: 184 TTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKM-------------VLIQQSNNPTP-- 228
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH-------QVTAKLLVPSDQIGCVI 155
ED +S + K V+ L D GG Q T++ VP+++ G VI
Sbjct: 229 EDKPLRISGEPSRVEKARQAVLV--LINSRDRPGGSIHYGYDGQETSQYAVPAEKAGLVI 286
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR 211
GKGG+ ++ I +GA + I K E P +++ + + G +++A+ I+ R
Sbjct: 287 GKGGESIKEICRVSGAHVEISK-EPPPDPSIK---IFNVRGNRQEIEQAIRMISER 338
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 17/130 (13%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAA---IKVDSSSTEGDDCLITVSSKEFFED 341
++ ++ P G VIGK G I +++E+G I+ ++ T D L E
Sbjct: 185 TIEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPEDKPLRISGEPSRVEK 244
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISF------TTRLLVPTSRIGCLIGKGGSIITEM 395
A + V + R +R G I + T++ VP + G +IGKGG I E+
Sbjct: 245 ARQAVL---VLINSR-----DRPGGSIHYGYDGQETSQYAVPAEKAGLVIGKGGESIKEI 296
Query: 396 RRLTKANIRI 405
R++ A++ I
Sbjct: 297 CRVSGAHVEI 306
>gi|393911660|gb|EJD76408.1| KH domain-containing protein [Loa loa]
Length = 635
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 154/377 (40%), Gaps = 81/377 (21%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFV 109
P +G +IGRGGE + Q++ T ++++ G+ R T+ + D+
Sbjct: 93 PDHCVGLVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQGSKMSV------DRAR 146
Query: 110 SPAQDALFKVHDRVIAE---ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIR 166
+ + + + +R G G Q+T ++ +P + G VIGKGG+ ++NI+
Sbjct: 147 AMINEVIARAGNRPPPNRTGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQ 206
Query: 167 SETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASA 226
+TG ++ ++ E+ S + ++I+G+ V+ A + L SR H
Sbjct: 207 EQTGVKM-VMIQENQESGG--QPKPLRITGDPEKVENARRMVEEILQ---SREDHPPG-- 258
Query: 227 ISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTA-GDWSRSLYSAPRDDLSSKEFS 285
+ G+ G G RS+
Sbjct: 259 -----------------------------HFGFPGSFGIGGGQRSIG------------- 276
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAI--KVDSSSTEGDDCLITVSSKEFFEDTL 343
++ P A++G +IGKGG I ++ ESGA I K D T + C + +
Sbjct: 277 -EVIVPRASVGMIIGKGGETIKRLAAESGAKIQFKPDDDQTTQERCAV-----------I 324
Query: 344 SATIEAVVRLQPRCSEKIERD---SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
T E + + SE +++ G F + VP+++ G +IGKGG I ++ +
Sbjct: 325 QGTAEQIAKATQFISELVKKSGAAGGAEMF--YMHVPSNKTGLVIGKGGETIKQICAESG 382
Query: 401 ANIRILPKENLPKIASE 417
A++ + + P ASE
Sbjct: 383 AHVEL--SRDPPPNASE 397
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 26/161 (16%)
Query: 20 DHGPNKRRYTGDDRDQFIIGP-EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
DH P + G F IG + ++ + P +G IIG+GGE +K+L ++ +KI+
Sbjct: 254 DHPPGHFGFPGS----FGIGGGQRSIGEVIVPRASVGMIIGKGGETIKRLAAESGAKIQF 309
Query: 79 G-ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGG 137
+ ++ER + +++ +F+S EL + GG
Sbjct: 310 KPDDDQTTQERCAVIQGTAEQ---IAKATQFIS----------------ELVKKSGAAGG 350
Query: 138 HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD 178
++ + VPS++ G VIGKGG+ ++ I +E+GA + + +D
Sbjct: 351 AEMF-YMHVPSNKTGLVIGKGGETIKQICAESGAHVELSRD 390
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRL- 353
+G VIG+GG I+QI+ ++ +++ S + T+ + D A I V+
Sbjct: 97 VGLVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQGSKMSVDRARAMINEVIARA 156
Query: 354 --QPRCSEKIERDSGLISFTTR-----LLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
+P + D G+ T R + +P ++ G +IGKGG I ++ T + ++
Sbjct: 157 GNRPPPNRTGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKM-VM 215
Query: 407 PKENLPKIASEDDEMVQISGDLDLAKDA 434
+EN + + + ++I+GD + ++A
Sbjct: 216 IQEN--QESGGQPKPLRITGDPEKVENA 241
>gi|256078999|ref|XP_002575779.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043990|emb|CCD81536.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 334
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA-------- 101
P R +G +IG+GGE + QL+ DT+ K++I + G+ ER VT+ + +
Sbjct: 106 PDRYVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQIDHAKQMIGDI 163
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
E K +P A + G T +++VP + G VIGK G+
Sbjct: 164 IERAGKNGTPTTPAY-----------------NSTGSITTIEMMVPGLKAGLVIGKNGET 206
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA----LCQIASRLHDNPS 217
++N++ E G ++ +++ + P+ D+ ++ISGE + V+KA L I SR D P
Sbjct: 207 IKNLQEENGVKMVLIQQSNNPTP---EDKPLRISGEPARVEKARQAVLVLINSR--DRPG 261
Query: 218 RSQH 221
S H
Sbjct: 262 GSMH 265
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 111/287 (38%), Gaps = 81/287 (28%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+ +S G VT + +P +G VIGKGG+ + ++++T +++I S A +
Sbjct: 90 NNNSVGSRVVTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQI-------SQAGTPER 142
Query: 191 LVQISGEASVV---KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIV 247
V ++G + K+ + I R N + + +++S+GS+
Sbjct: 143 TVTLTGTPQQIDHAKQMIGDIIERAGKN--------GTPTTPAYNSTGSIT--------- 185
Query: 248 GIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
++ ++ P G VIGK G I
Sbjct: 186 -------------------------------------TIEMMVPGLKAGLVIGKNGETIK 208
Query: 308 QIRQESGAA---IKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERD 364
+++E+G I+ ++ T D L E A + V + R +R
Sbjct: 209 NLQEENGVKMVLIQQSNNPTPEDKPLRISGEPARVEKARQAVL---VLINSR-----DRP 260
Query: 365 SGLISF------TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
G + + T++ VP + G +IGKGG I E+ R++ A++ I
Sbjct: 261 GGSMHYGYDGQETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEI 307
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 24/143 (16%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T + P K G +IG+ GE +K L+ + K+ V + +++ T
Sbjct: 185 TTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKM-------------VLIQQSNNPT--P 229
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH-------QVTAKLLVPSDQIGCVI 155
ED +S + K V+ L D GG Q T++ VP+++ G VI
Sbjct: 230 EDKPLRISGEPARVEKARQAVLV--LINSRDRPGGSMHYGYDGQETSQYAVPAEKAGLVI 287
Query: 156 GKGGQIVQNIRSETGAQIRILKD 178
GKGG+ ++ I +GA + I K+
Sbjct: 288 GKGGESIKEICRVSGAHVEISKE 310
>gi|226477992|emb|CAX72689.1| KH-type splicing regulatory protein (FUSE binding protein 2)
[Schistosoma japonicum]
Length = 535
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 22/189 (11%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
GP P R +G +IG+GGE + QL+ DT+ K++I + G+ ER VT+ +
Sbjct: 94 GPRVVTTETAIPDRFVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQ 151
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGK 157
+ A+ + + +R + G T +++VP + G VIGK
Sbjct: 152 ----------IDHAKQMIGDIIERAGKNGTPTTTTYNSTGSITTIEMMVPGLKAGLVIGK 201
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA----LCQIASRLH 213
G+ ++N++ E G ++ +++ + P+ D+ ++ISGE S V+KA L I SR
Sbjct: 202 NGETIKNLQEENGVKMVLIQQSNNPT---PEDKPLRISGEPSRVEKARQAVLVLINSR-- 256
Query: 214 DNPSRSQHL 222
D P S H
Sbjct: 257 DRPGGSIHY 265
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T + P K G +IG+ GE +K L+ + K+ V + +++ T
Sbjct: 184 TTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKM-------------VLIQQSNNPTP-- 228
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH-------QVTAKLLVPSDQIGCVI 155
ED +S + K V+ L D GG Q T++ VP+++ G VI
Sbjct: 229 EDKPLRISGEPSRVEKARQAVLV--LINSRDRPGGSIHYGYDGQETSQYAVPAEKAGLVI 286
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR 211
GKGG+ ++ I +GA + I K E P +++ + + G +++A+ I+ R
Sbjct: 287 GKGGESIKEICRVSGAHVEISK-EPPPDPSIK---IFNVRGNRQEIEQAIRMISER 338
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 17/130 (13%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAA---IKVDSSSTEGDDCLITVSSKEFFED 341
++ ++ P G VIGK G I +++E+G I+ ++ T D L E
Sbjct: 185 TIEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPEDKPLRISGEPSRVEK 244
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISF------TTRLLVPTSRIGCLIGKGGSIITEM 395
A + V + R +R G I + T++ VP + G +IGKGG I E+
Sbjct: 245 ARQAVL---VLINSR-----DRPGGSIHYGYDGQETSQYAVPAEKAGLVIGKGGESIKEI 296
Query: 396 RRLTKANIRI 405
R++ A++ I
Sbjct: 297 CRVSGAHVEI 306
>gi|146197849|dbj|BAF57636.1| hnRNP K protein [Dugesia japonica]
Length = 337
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 134/310 (43%), Gaps = 38/310 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R+L P + GS+IG+ GE ++ LR ++I I + ER++++ + D
Sbjct: 23 RFLIPSKAAGSVIGKSGENIRNLRRMFMARINISDN--SGPERILSLEA---------DL 71
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
D + L K+ + + +D + V ++LV +G +IG+GG + ++
Sbjct: 72 DTILEILTQCLEKMEGCIPLPRAGSGDCNDSINHVDLRMLVNQSLVGALIGRGGGRINDL 131
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
R + +R+LK + C +D +VQ+ G +V + +I + P R +
Sbjct: 132 REK--CDLRVLK-VYQTVCPDSTDRIVQLVGAIPLVIDCIGKIVDMCKETPVREPKVNYD 188
Query: 226 AISNSHSSSGSLVG--PTAATPIVGIAP---------LMGPYGGYKGDTAGDWSR----- 269
A + H+++ G A P + + YK + D+S
Sbjct: 189 AQNYDHAAANHYGGWAQNAIRPNNNLTTRSLGFSRPGFLKHQASYKNEHY-DYSYPNNYR 247
Query: 270 ----SLYSAPRDDLSSKEFS-LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
S ++ D+ + E +RL P +G +IG GG+ I Q+R +SGA I + S
Sbjct: 248 EMDTSFRNSHYDEQDNNEVQEIRL--PHKVVGAIIGPGGSRIQQVRMDSGAHITISSPDR 305
Query: 325 EGDDCLITVS 334
+ ++T+S
Sbjct: 306 NPQERVVTIS 315
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 27/166 (16%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
LR + P G VIGK G I +R+ A I + +S G + +++ L A
Sbjct: 22 LRFLIPSKAAGSVIGKSGENIRNLRRMFMARINISDNS--GPERILS----------LEA 69
Query: 346 TIEAVVRLQPRCSEKIER------------DSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ ++ + +C EK+E + + R+LV S +G LIG+GG I
Sbjct: 70 DLDTILEILTQCLEKMEGCIPLPRAGSGDCNDSINHVDLRMLVNQSLVGALIGRGGGRIN 129
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVM 439
++R K ++R+L K D +VQ+ G + L D + +++
Sbjct: 130 DLRE--KCDLRVL-KVYQTVCPDSTDRIVQLVGAIPLVIDCIGKIV 172
>gi|440634730|gb|ELR04649.1| hypothetical protein GMDG_06931 [Geomyces destructans 20631-21]
Length = 473
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 164/401 (40%), Gaps = 76/401 (18%)
Query: 56 SIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDA 115
++IG+GGE V +R + +K + + G+ ER++TV D A
Sbjct: 132 TVIGKGGENVTLIRKMSGAKCTVSDYQKGAVERILTVSGVVD--------------AAAK 177
Query: 116 LFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
F + R + E + +LLVP IG +IGKGG ++ I+ ++GA++
Sbjct: 178 AFGLIIRTLNGEPLDQPSTPQSRTYPLRLLVPHVLIGSIIGKGGVRIREIQEQSGARLN- 236
Query: 176 LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSG 235
D LP L ++ V + G A V A +AS L + ++ S + SG
Sbjct: 237 ASDACLP---LSTERSVVVLGVADAVHIATYYVASTLLEQ--LTERFGGPTASAYATRSG 291
Query: 236 SLVGPTAATP----IVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCP 291
GP P +V P P GG G D R +D+ S++ P
Sbjct: 292 ---GPAGVIPGGMQVVPYVPQ--PAGGNYGHP--DNVR------HNDIRSRQ------TP 332
Query: 292 VANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF-------FEDTLS 344
A G +G Q+ GA++ S G + ++ +
Sbjct: 333 AAQYGQPYAQGPG-----PQQGGASMHYGGSPAAGYGGVAPQQPQQVGHGGPASHAGPPA 387
Query: 345 ATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIR 404
++ VV QP T ++ +P +G +IGKGG+ I E+R+L+ + I+
Sbjct: 388 QPMQGVVPGQP--------------LTQQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIK 433
Query: 405 I-LPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRA 444
I P++N ++ +V I+G + + AL + +RL +
Sbjct: 434 INEPQDN------SNERLVTITGTAECNQMALYMLYSRLES 468
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
G +T ++ +P+D +G +IGKGG + IR +G+ I+I + + ++ LV I+G
Sbjct: 396 GQPLTQQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQD-----NSNERLVTITG 450
Query: 197 EASVVKKALCQIASRLHDNPSR 218
A + AL + SRL R
Sbjct: 451 TAECNQMALYMLYSRLESEKHR 472
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 9/143 (6%)
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
+ GD S S + D+ S +R V A VIGKGG + IR+ SGA V
Sbjct: 100 STGDQSSSGNALQHDE--SSWIHIRAVISSAEAATVIGKGGENVTLIRKMSGAKCTVSDY 157
Query: 323 STEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS--FTTRLLVPTSR 380
+ ++TVS D + ++R E +++ S S + RLLVP
Sbjct: 158 QKGAVERILTVSG---VVDAAAKAFGLIIRT--LNGEPLDQPSTPQSRTYPLRLLVPHVL 212
Query: 381 IGCLIGKGGSIITEMRRLTKANI 403
IG +IGKGG I E++ + A +
Sbjct: 213 IGSIIGKGGVRIREIQEQSGARL 235
>gi|307211366|gb|EFN87498.1| Far upstream element-binding protein 1 [Harpegnathos saltator]
Length = 751
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 161/391 (41%), Gaps = 85/391 (21%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFV 109
P + +G IIGRGGE + +L+ +T KI++ G ERV T+ + + N ++
Sbjct: 110 PDKMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLPERVCTLTGSREAVNRAKE----- 164
Query: 110 SPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA-----KLLVPSDQIGCVIGKGGQIVQN 164
L V+ R +E + GG + ++++P ++G +IGKGG+ ++
Sbjct: 165 ----LVLSIVNQRSRSEGIGDMNMGGGGGGMMGHPGFVEIMIPGPKVGLIIGKGGETIKQ 220
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLA 224
++ ++GA++ ++++ + ++ ++I+G+ V+ A + L+
Sbjct: 221 LQEKSGAKMVVIQE----GPSQEQEKPLRITGDPQKVEHA---------------KQLVY 261
Query: 225 SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEF 284
I+ G + P G Y D P ++
Sbjct: 262 ELIAEKEMQMFHRGGRGSERP-----------GNYTNDNG------FNHGPANN-----D 299
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD---DCLITVSSK--EFF 339
+ ++ P A +G VIGKGG +I +I+ ESGA ++ +G CL++ + E
Sbjct: 300 GVEVLVPRAAVGVVIGKGGDMIKKIQAESGAKVQFQQGREDGPGDRKCLLSGKHQAVEQA 359
Query: 340 EDTLSATIEAVVR----------------------LQPRCSEKIERDSG---LISFTTRL 374
+ I++V+R P +R G T
Sbjct: 360 RQRIQELIDSVMRRDDGRNNMGGRGGPRGNGFGGSRNPNEYGSWDRRQGGPMQDKIETTF 419
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
VP+S+ G +IGKGG I ++ + T A+ +
Sbjct: 420 TVPSSKCGIIIGKGGETIKQINQQTGAHCEL 450
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 130/305 (42%), Gaps = 44/305 (14%)
Query: 48 LCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSE-ERVVTVYSASDETNAFEDGD 106
+ P K+G IIG+GGE +KQL+ + +K+ + + P E E+ + + + + E
Sbjct: 201 MIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRI---TGDPQKVEHAK 257
Query: 107 KFVSP--AQDALFKVHDRVIAEELRGDEDSDGG------HQVTAKLLVPSDQIGCVIGKG 158
+ V A+ + H E G+ +D G + ++LVP +G VIGKG
Sbjct: 258 QLVYELIAEKEMQMFHRGGRGSERPGNYTNDNGFNHGPANNDGVEVLVPRAAVGVVIGKG 317
Query: 159 GQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
G +++ I++E+GA+++ + E P D +SG+ V++A +I
Sbjct: 318 GDMIKKIQAESGAKVQFQQGREDGP-----GDRKCLLSGKHQAVEQARQRI--------- 363
Query: 218 RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD 277
Q L+ S + + G + Y G W R P
Sbjct: 364 --QELIDSVMRRDDGRNNMGGRGGPRGNGFGGSRNPNEY--------GSWDRR-QGGPMQ 412
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD--SSSTEGDDCLITVSS 335
D F++ P + G +IGKGG I QI Q++GA ++D + S E + I +
Sbjct: 413 DKIETTFTV----PSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQSNENEKIFIIRGN 468
Query: 336 KEFFE 340
E E
Sbjct: 469 PEQVE 473
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 124/274 (45%), Gaps = 37/274 (13%)
Query: 198 ASVVKKALCQIASRLHDNPSRSQH----LLASAISNSHSSSGSLVGPTAATPIVGIAPLM 253
A+ +++A QIA+++ NP+ +Q+ L + +S + A P++GI
Sbjct: 20 AAALQRAK-QIAAKI--NPAGAQNNQDSKLKRPLEDSSEPEAKKMAALVADPLIGI---- 72
Query: 254 GPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVC------PVANIGGVIGKGGAIIN 307
GG +++ S S S P+ S+ + +C P +G +IG+GG I
Sbjct: 73 --RGGPGANSSIGDSGSQSSRPQTSSSN----VGGICNEDIRVPDKMVGLIIGRGGEQIT 126
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL 367
+++ E+G I++ S + + T++ + + ++V + R + + G
Sbjct: 127 RLQSETGCKIQMAPESGGLPERVCTLTGSREAVNRAKELVLSIVNQRSRSEGIGDMNMGG 186
Query: 368 ISFT-------TRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE 420
+++P ++G +IGKGG I +++ + A + ++ + + E ++
Sbjct: 187 GGGGMMGHPGFVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQE----GPSQEQEK 242
Query: 421 MVQISGD---LDLAKDALIQVMTRLRANLFDREG 451
++I+GD ++ AK + +++ +F R G
Sbjct: 243 PLRITGDPQKVEHAKQLVYELIAEKEMQMFHRGG 276
>gi|302916853|ref|XP_003052237.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733176|gb|EEU46524.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 373
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 136/293 (46%), Gaps = 36/293 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + ++ G IIG+GG+ V LR +T K + + V G +RV+T+ D A
Sbjct: 51 RAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCD---AISRA 107
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
V+ A + + A + G S+G H + KLL+ +Q+G +IG+ G +++I
Sbjct: 108 YAIVARA------LLEGAPAMGMGGIVQSNGTHPI--KLLISHNQMGTIIGRQGLKIKHI 159
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR-SQHLLA 224
+ +G ++ + + E LP R +V++ G +++A+ +I L D+ R + +L
Sbjct: 160 QDASGVRM-VAQKEMLPQSTER---IVEVQGTPEGIQRAVWEICKCLVDDWQRGTGTVLY 215
Query: 225 SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG-------GYKGDTAGDWSR-------- 269
+ + + +S + VG A G YG G D + SR
Sbjct: 216 NPVVRTQPASSTSVGSGGAGYSQGSG--RSEYGSPRVMRTGNGADFSNGSSRPYNRRSDS 273
Query: 270 --SLYSAPRDDLSSKEFSLRLVC-PVANIGGVIGKGGAIINQIRQESGAAIKV 319
++ P D + +E + + P +G +IG+ G+ I++IR+ SGA I +
Sbjct: 274 DAAIRGPPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISI 326
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
D +G T + +P+D +GC+IG+ G + IR +GA+I I K H + + +
Sbjct: 284 DENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDET----GERMF 339
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHL 222
I G A + AL + L R L
Sbjct: 340 TIMGTAKANESALFLLYENLEAEKMRRSQL 369
>gi|302692864|ref|XP_003036111.1| hypothetical protein SCHCODRAFT_74754 [Schizophyllum commune H4-8]
gi|300109807|gb|EFJ01209.1| hypothetical protein SCHCODRAFT_74754 [Schizophyllum commune H4-8]
Length = 282
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 95/191 (49%), Gaps = 16/191 (8%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASD 97
G +++ P ++GS+IG+GG +K+++ + +++ E +PGS ERV++V +D
Sbjct: 81 GSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGARLNASEGMLPGSTERVLSVAGVAD 140
Query: 98 ET--------NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSD 149
N + + + +A ++ + + + T ++ +P+D
Sbjct: 141 AIHIATYYVGNILIEAQERMPSTANASYRPGNPT-RRPITNAPYPGSTYVQTQQIYIPND 199
Query: 150 QIGCVIGKGGQIVQNIRSETGAQIRILKD----EHLPSCALRS--DELVQISGEASVVKK 203
+GC+IGKGG + IR + +QI+I++ +P+ A S + LV I+G+ + ++
Sbjct: 200 LVGCIIGKGGSKINEIRHMSASQIKIMEPGAVATGMPAGAAGSEGERLVVITGQPANIQM 259
Query: 204 ALCQIASRLHD 214
A+ + RL
Sbjct: 260 AVQMLYHRLEQ 270
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 53/263 (20%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIGR G V ++R + +++ + E++PG+ ER++ V D A
Sbjct: 16 IIGRAGAHVNEIREKSGARVVVSESIPGNPERILNVSGPLD--------------AVSKA 61
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT K ++P+ ++G VIGKGG ++ I+ +GA++
Sbjct: 62 FGLIVRRINDEPFDVPSLPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGARLN-A 120
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
+ LP ++ ++ ++G A + A + + L + +Q + S + S+
Sbjct: 121 SEGMLPGS---TERVLSVAGVADAIHIATYYVGNILIE----AQERMPSTANASYRPGNP 173
Query: 237 LVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIG 296
P P Y G T ++ +Y +DL +G
Sbjct: 174 TRRPITNAP-------------YPGSTY-VQTQQIYIP--NDL---------------VG 202
Query: 297 GVIGKGGAIINQIRQESGAAIKV 319
+IGKGG+ IN+IR S + IK+
Sbjct: 203 CIIGKGGSKINEIRHMSASQIKI 225
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 32/196 (16%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-----------DC 329
S+ +++ + P + +G VIGKGG+ I +I+ SGA + G D
Sbjct: 82 SRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGARLNASEGMLPGSTERVLSVAGVADA 141
Query: 330 L---------ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSR 380
+ I + ++E T +A+ + + S + T ++ +P
Sbjct: 142 IHIATYYVGNILIEAQERMPSTANASYRPGNPTRRPITNAPYPGSTYVQ-TQQIYIPNDL 200
Query: 381 IGCLIGKGGSIITEMRRLTKANIRILP----KENLPKIA--SEDDEMVQISGDLDLAKDA 434
+GC+IGKGGS I E+R ++ + I+I+ +P A SE + +V I+G + A
Sbjct: 201 VGCIIGKGGSKINEIRHMSASQIKIMEPGAVATGMPAGAAGSEGERLVVITG-----QPA 255
Query: 435 LIQVMTRLRANLFDRE 450
IQ+ ++ + ++E
Sbjct: 256 NIQMAVQMLYHRLEQE 271
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IG+ GA +N+IR++SGA + V S + ++ VS D +S +VR
Sbjct: 16 IIGRAGAHVNEIREKSGARVVVSESIPGNPERILNVSGPL---DAVSKAFGLIVRRINDE 72
Query: 358 SEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
+ G + T + ++P SR+G +IGKGGS I E++ + A +
Sbjct: 73 PFDVPSLPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGARL 118
>gi|50545305|ref|XP_500190.1| YALI0A18161p [Yarrowia lipolytica]
gi|49646055|emb|CAG84122.1| YALI0A18161p [Yarrowia lipolytica CLIB122]
Length = 385
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 156/342 (45%), Gaps = 42/342 (12%)
Query: 30 GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERV 89
GDD Q ++ R L ++ G IIG+ G V LR K K + ++V G +R+
Sbjct: 61 GDDTTQLVL-------RALVSTKEAGVIIGKDGATVAGLRDAAKVKAGVTKSVAGIPDRI 113
Query: 90 VTVYSASDETNAFEDGDKFVSPAQDALFK--VHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
++V + + + + A AL V+ G + + T +LL+P
Sbjct: 114 LSVAGTAAGVS------RAIGLAAAALVAHPPSGYVLNLVPPGPQGT-----TTVRLLIP 162
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH-LPSCALRSDELVQISGEASVVKKALC 206
++G ++GKGG ++ I+++ G +RI+ +H LP S+ +V+I GE ++ A+
Sbjct: 163 HQRMGSILGKGGVRIKAIQAKYG--VRIVASKHRLPHS---SERIVEIQGEPLALQTAVY 217
Query: 207 QIASRLHDNPSRSQHLLASAISNSHSSSGSLV--GPTAATPIVGIAPLMGPY--GGYKGD 262
+ L + +S + A N S GS+ V A G + GG D
Sbjct: 218 TVVQCLLEEKDKS---ILVAYYNPRSLEGSMTLREDPEDKEYVSFAGYRGRHQDGGSDTD 274
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLR-LVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
T + + S + + LSS + ++ + P + G +IG+ G I ++R+ SGAAI + S
Sbjct: 275 TDREATVSDHGGDAEALSSSDACVQSTIIPASFAGYIIGRRGDNIRELRKRSGAAISI-S 333
Query: 322 SSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIER 363
S E + L+ S+ +A A+ LQ + E+ ER
Sbjct: 334 SEYERERTLLMRGSE-------AAVALAMSMLQQQMDEERER 368
>gi|195037250|ref|XP_001990077.1| GH18435 [Drosophila grimshawi]
gi|193894273|gb|EDV93139.1| GH18435 [Drosophila grimshawi]
Length = 569
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 34/199 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS-----STEGDDCLITVSSKEF 338
F ++++ P G +IGKGG I +++++GA +K+ S T CLIT S +
Sbjct: 66 FHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEGI 125
Query: 339 FEDTLSATIEAVVRLQPRCSEKI---------ERDSGLISFTTRLLVPTSRIGCLIGKGG 389
T+ I +R +P + KI ERD + ++LVP S G +IGKGG
Sbjct: 126 M--TVVDFIMDKIREKPDLTTKIIDAESKQAQERDKQV-----KILVPNSTAGMIIGKGG 178
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTR-------- 441
+ I +++ + + ++I K PK S + + I GD + K+A ++++
Sbjct: 179 AFIKQIKEESGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSG 235
Query: 442 --LRANLFDREGAVSTFVP 458
L + D G V+ F P
Sbjct: 236 TCLNVSYADVNGPVANFNP 254
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 92/183 (50%), Gaps = 21/183 (11%)
Query: 42 DTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSAS 96
DT + + L P G+IIG+GGE + L+ DT +++++ ++ PG+ ERV +
Sbjct: 63 DTTFHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLI---- 118
Query: 97 DETNAFEDGDKFVSPAQDALFKVHD---RVIAEELRGDEDSDGGHQVTAKLLVPSDQIGC 153
T + E V D + + D ++I E + ++ D QV K+LVP+ G
Sbjct: 119 --TGSVEGIMTVVDFIMDKIREKPDLTTKIIDAESKQAQERD--KQV--KILVPNSTAGM 172
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
+IGKGG ++ I+ E+G+ ++I + P + + I G+ K A I S++
Sbjct: 173 IIGKGGAFIKQIKEESGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIV 229
Query: 214 DNP 216
++P
Sbjct: 230 EDP 232
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/214 (18%), Positives = 85/214 (39%), Gaps = 56/214 (26%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVV 201
K+LVP+ G +IGKGG+ + +++ +TGA++++ K + P R + I+G +
Sbjct: 69 KILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTER---VCLITGSVEGI 125
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
+ I ++ + P
Sbjct: 126 MTVVDFIMDKIREKP--------------------------------------------- 140
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D + + A ++ ++++ P + G +IGKGGA I QI++ESG+ +++
Sbjct: 141 ----DLTTKIIDAESKQAQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQ 196
Query: 322 SSTE---GDDCLITVSSKEFFEDTLSATIEAVVR 352
+ + C+ + KE ++ + +V
Sbjct: 197 KPKDVSLQERCITIIGDKENNKNACKMILSKIVE 230
>gi|256078993|ref|XP_002575776.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043993|emb|CCD81539.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 356
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA-------- 101
P R +G +IG+GGE + QL+ DT+ K++I + G+ ER VT+ + +
Sbjct: 106 PDRYVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQIDHAKQMIGDI 163
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
E K +P A + G T +++VP + G VIGK G+
Sbjct: 164 IERAGKNGTPTTPAY-----------------NSTGSITTIEMMVPGLKAGLVIGKNGET 206
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA----LCQIASRLHDNPS 217
++N++ E G ++ +++ + P+ D+ ++ISGE + V+KA L I SR D P
Sbjct: 207 IKNLQEENGVKMVLIQQSNNPTP---EDKPLRISGEPARVEKARQAVLVLINSR--DRPG 261
Query: 218 RSQH 221
S H
Sbjct: 262 GSMH 265
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 111/287 (38%), Gaps = 81/287 (28%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+ +S G VT + +P +G VIGKGG+ + ++++T +++I S A +
Sbjct: 90 NNNSVGSRVVTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQI-------SQAGTPER 142
Query: 191 LVQISGEASVV---KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIV 247
V ++G + K+ + I R N + + +++S+GS+
Sbjct: 143 TVTLTGTPQQIDHAKQMIGDIIERAGKN--------GTPTTPAYNSTGSIT--------- 185
Query: 248 GIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
++ ++ P G VIGK G I
Sbjct: 186 -------------------------------------TIEMMVPGLKAGLVIGKNGETIK 208
Query: 308 QIRQESGAA---IKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERD 364
+++E+G I+ ++ T D L E A + V + R +R
Sbjct: 209 NLQEENGVKMVLIQQSNNPTPEDKPLRISGEPARVEKARQAVL---VLINSR-----DRP 260
Query: 365 SGLISF------TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
G + + T++ VP + G +IGKGG I E+ R++ A++ I
Sbjct: 261 GGSMHYGYDGQETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEI 307
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 24/143 (16%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T + P K G +IG+ GE +K L+ + K+ V + +++ T
Sbjct: 185 TTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKM-------------VLIQQSNNPT--P 229
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH-------QVTAKLLVPSDQIGCVI 155
ED +S + K V+ L D GG Q T++ VP+++ G VI
Sbjct: 230 EDKPLRISGEPARVEKARQAVLV--LINSRDRPGGSMHYGYDGQETSQYAVPAEKAGLVI 287
Query: 156 GKGGQIVQNIRSETGAQIRILKD 178
GKGG+ ++ I +GA + I K+
Sbjct: 288 GKGGESIKEICRVSGAHVEISKE 310
>gi|345566886|gb|EGX49826.1| hypothetical protein AOL_s00076g710 [Arthrobotrys oligospora ATCC
24927]
Length = 379
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 145/331 (43%), Gaps = 57/331 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + ++ G IIG+ G+ V LR +T K + + VPG +RV+TV D
Sbjct: 52 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGNLDGV-----A 106
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ AQ + + + G H V +LL+ +Q+G +IG+ G +++I
Sbjct: 107 KAYAMVAQTLVDSPPGAIPTTPM-------GTHPV--RLLISHNQMGTIIGRQGLKIKHI 157
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR-SQHLLA 224
+ +G ++ + + E LP R +V++ G A +++A+ +I L D+ R + +L
Sbjct: 158 QDVSGVRM-VAQKEMLPQSTER---IVEVQGSADGIRQAIWEIGKCLVDDWQRGTGTILY 213
Query: 225 SAISNSHSSSGSLVGPTAATPIVGIAPLMGPY----------GGYKGDTAGDWSRSLYSA 274
+ S++S G+ P+ + G A GP G + D+S S
Sbjct: 214 NPAVRSNTSHGTGSSPSVIS--NGGAGTSGPTDRFTNERPNRGPVRTGNGTDFSEPSPSF 271
Query: 275 PR--------------------DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
PR ++L ++ S+ P +G +IG+GG+ I++IR+ SG
Sbjct: 272 PRRGHSDSTSRASAPAPNTENGEELQTQNISI----PADMVGCIIGRGGSKISEIRKSSG 327
Query: 315 AAIKVDSSSTE--GDDCLITVSSKEFFEDTL 343
A I + + + G+ V S + E L
Sbjct: 328 ARISIAKAPHDDTGERMFTIVGSPQSNEKAL 358
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 125 AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSC 184
E +R DED +T + +V S + G +IGK G+ V ++R ETG + + K +P
Sbjct: 35 GEPVRTDEDY-AQSPLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSK--VVPGV 91
Query: 185 ALRSDELVQISGEASVVKKALCQIASRLHDNP 216
D ++ ++G V KA +A L D+P
Sbjct: 92 ---HDRVLTVTGNLDGVAKAYAMVAQTLVDSP 120
>gi|108862918|gb|ABG22073.1| FLK, putative, expressed [Oryza sativa Japonica Group]
gi|215694782|dbj|BAG89973.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 355
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 78/136 (57%), Gaps = 17/136 (12%)
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRC-------SEKIERDSGLISFTTRLLVPTSRIGCLI 385
+S+K+ + L ++ ++R+ R S++ +R +G + TRLLVP S+ G LI
Sbjct: 2 ISAKDEPDAPLPPAVDGLLRVHKRITDGLDGESDQPQRAAGTVG-PTRLLVPASQAGSLI 60
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD-LDLAKDALIQVMTRLRA 444
GK G+ I ++ +K +RIL E++P +A DD +V+I G+ LD+ K A+ + + LR
Sbjct: 61 GKQGATIKSIQDASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDVHK-AVELIASHLRK 117
Query: 445 NLFDREGAVSTFVPVF 460
L DR + +P+F
Sbjct: 118 FLVDR-----SVLPLF 128
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD---GGHQVTAKLLVPSDQIGCVIG 156
+A ++ D + PA D L +VH R I + L G+ D G +LLVP+ Q G +IG
Sbjct: 3 SAKDEPDAPLPPAVDGLLRVHKR-ITDGLDGESDQPQRAAGTVGPTRLLVPASQAGSLIG 61
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
K G +++I+ + +RIL E +P AL D +V+I GE V KA+ IAS L
Sbjct: 62 KQGATIKSIQDASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDVHKAVELIASHL 115
>gi|195107855|ref|XP_001998509.1| GI24011 [Drosophila mojavensis]
gi|193915103|gb|EDW13970.1| GI24011 [Drosophila mojavensis]
Length = 574
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 34/199 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS-----STEGDDCLITVSSKEF 338
F ++++ P G +IGKGG I +++++GA +K+ S T CLIT S +
Sbjct: 66 FHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEGI 125
Query: 339 FEDTLSATIEAVVRLQPRCSEKI---------ERDSGLISFTTRLLVPTSRIGCLIGKGG 389
T+ I +R +P + KI ERD + ++LVP S G +IGKGG
Sbjct: 126 M--TVVDFIMDKIREKPDLTTKIIDAESKQAQERDKQV-----KILVPNSTAGMIIGKGG 178
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTR-------- 441
+ I +++ + + ++I K PK S + + I GD + K+A ++++
Sbjct: 179 AFIKQIKEESGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSG 235
Query: 442 --LRANLFDREGAVSTFVP 458
L + D G V+ F P
Sbjct: 236 TCLNVSYADVNGPVANFNP 254
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 92/183 (50%), Gaps = 21/183 (11%)
Query: 42 DTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSAS 96
DT + + L P G+IIG+GGE + L+ DT +++++ ++ PG+ ERV +
Sbjct: 63 DTTFHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLI---- 118
Query: 97 DETNAFEDGDKFVSPAQDALFKVHD---RVIAEELRGDEDSDGGHQVTAKLLVPSDQIGC 153
T + E V D + + D ++I E + ++ D QV K+LVP+ G
Sbjct: 119 --TGSVEGIMTVVDFIMDKIREKPDLTTKIIDAESKQAQERD--KQV--KILVPNSTAGM 172
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
+IGKGG ++ I+ E+G+ ++I + P + + I G+ K A I S++
Sbjct: 173 IIGKGGAFIKQIKEESGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIV 229
Query: 214 DNP 216
++P
Sbjct: 230 EDP 232
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/214 (18%), Positives = 85/214 (39%), Gaps = 56/214 (26%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVV 201
K+LVP+ G +IGKGG+ + +++ +TGA++++ K + P R + I+G +
Sbjct: 69 KILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTER---VCLITGSVEGI 125
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
+ I ++ + P
Sbjct: 126 MTVVDFIMDKIREKP--------------------------------------------- 140
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D + + A ++ ++++ P + G +IGKGGA I QI++ESG+ +++
Sbjct: 141 ----DLTTKIIDAESKQAQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQ 196
Query: 322 SSTE---GDDCLITVSSKEFFEDTLSATIEAVVR 352
+ + C+ + KE ++ + +V
Sbjct: 197 KPKDVSLQERCITIIGDKENNKNACKMILSKIVE 230
>gi|326930374|ref|XP_003211322.1| PREDICTED: far upstream element-binding protein 3-like [Meleagris
gallopavo]
Length = 554
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 88/158 (55%), Gaps = 15/158 (9%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGD 106
+ P + +G IIGRGGE + +++I++ KI+I G ER V + + E+
Sbjct: 68 FKVPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPERPC-VLTGTPES------- 119
Query: 107 KFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIR 166
+ A+ L ++ DR G + G+ ++L+P+ ++G VIGKGG+ ++ ++
Sbjct: 120 --IEQAKRLLGQIVDR--CRNGPGFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQ 175
Query: 167 SETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
TG ++ +++D +P+ A D+ ++I+G+A V++A
Sbjct: 176 ERTGVKMIMIQDGPMPTGA---DKPLRITGDAFKVQQA 210
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 8/156 (5%)
Query: 290 CPVANIGGVIGKGGAIINQIRQESGAAIKV--DSSSTEGDDCLITVSSKEFFEDTLSATI 347
P +G +IG+GG I++I+ ESG I++ DS C++T + E E
Sbjct: 70 VPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPERPCVLT-GTPESIEQAKRLLG 128
Query: 348 EAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILP 407
+ V R R D S +L+P S++G +IGKGG I +++ T + ++
Sbjct: 129 QIVDRC--RNGPGFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQ 186
Query: 408 KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
+P A D+ ++I+GD + A V+ +R
Sbjct: 187 DGPMPTGA---DKPLRITGDAFKVQQAREMVLEIIR 219
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 121/291 (41%), Gaps = 59/291 (20%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T+ L P K+G +IG+GGE +KQL+ T K+ + + P + + +D+
Sbjct: 149 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGP--------MPTGADKPLRI 200
Query: 103 EDGDKF-VSPAQDALFKV---HDRVIAEELRGDEDSD-GGHQVTAKLLVPSDQIGCVIGK 157
GD F V A++ + ++ D+ +R D S GG + ++ VP +G VIG+
Sbjct: 201 -TGDAFKVQQAREMVLEIIREKDQADFRGVRNDFSSRMGGGSI--EVSVPRFAVGIVIGR 257
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
G++++ I+++ G +I+ D+ + + + Q+ G L D
Sbjct: 258 NGEMIKKIQNDAGVRIQFKPDD-----GISPERVAQVMG---------------LPDRCQ 297
Query: 218 RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD 277
+ H+++ I + G G A +G GDWS ++
Sbjct: 298 HAAHIISELILTAQERDG--FGSLAVA-------------RGRGRGRGDWSVGTPGGMQE 342
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P G VIGKGG I I Q+SGA +++ + D
Sbjct: 343 --------ITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTD 385
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 64/145 (44%), Gaps = 13/145 (8%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV--DSSSTEGDDCLITV 333
+D+ ++ P + +G VIGKGG I Q+++ +G + + D G D + +
Sbjct: 141 HNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPMPTGADKPLRI 200
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRL-------LVPTSRIGCLIG 386
+ F + ++R + + + R+ F++R+ VP +G +IG
Sbjct: 201 TGDAFKVQQAREMVLEIIREKDQADFRGVRN----DFSSRMGGGSIEVSVPRFAVGIVIG 256
Query: 387 KGGSIITEMRRLTKANIRILPKENL 411
+ G +I +++ I+ P + +
Sbjct: 257 RNGEMIKKIQNDAGVRIQFKPDDGI 281
>gi|393911661|gb|EJD76409.1| KH domain-containing protein, variant [Loa loa]
Length = 582
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 154/377 (40%), Gaps = 81/377 (21%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFV 109
P +G +IGRGGE + Q++ T ++++ G+ R T+ + D+
Sbjct: 40 PDHCVGLVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQGSKMSV------DRAR 93
Query: 110 SPAQDALFKVHDRVIAE---ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIR 166
+ + + + +R G G Q+T ++ +P + G VIGKGG+ ++NI+
Sbjct: 94 AMINEVIARAGNRPPPNRTGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQ 153
Query: 167 SETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASA 226
+TG ++ ++ E+ S + ++I+G+ V+ A + L SR H
Sbjct: 154 EQTGVKM-VMIQENQESGG--QPKPLRITGDPEKVENARRMVEEILQ---SREDHPPG-- 205
Query: 227 ISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTA-GDWSRSLYSAPRDDLSSKEFS 285
+ G+ G G RS+
Sbjct: 206 -----------------------------HFGFPGSFGIGGGQRSIG------------- 223
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAI--KVDSSSTEGDDCLITVSSKEFFEDTL 343
++ P A++G +IGKGG I ++ ESGA I K D T + C + +
Sbjct: 224 -EVIVPRASVGMIIGKGGETIKRLAAESGAKIQFKPDDDQTTQERCAV-----------I 271
Query: 344 SATIEAVVRLQPRCSEKIERD---SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
T E + + SE +++ G F + VP+++ G +IGKGG I ++ +
Sbjct: 272 QGTAEQIAKATQFISELVKKSGAAGGAEMF--YMHVPSNKTGLVIGKGGETIKQICAESG 329
Query: 401 ANIRILPKENLPKIASE 417
A++ + + P ASE
Sbjct: 330 AHVEL--SRDPPPNASE 344
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 77/160 (48%), Gaps = 24/160 (15%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
DH P + G I G + ++ + P +G IIG+GGE +K+L ++ +KI+
Sbjct: 201 DHPPGHFGFPGSFG---IGGGQRSIGEVIVPRASVGMIIGKGGETIKRLAAESGAKIQFK 257
Query: 80 -ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH 138
+ ++ER + +++ +F+S EL + GG
Sbjct: 258 PDDDQTTQERCAVIQGTAEQ---IAKATQFIS----------------ELVKKSGAAGGA 298
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD 178
++ + VPS++ G VIGKGG+ ++ I +E+GA + + +D
Sbjct: 299 EMF-YMHVPSNKTGLVIGKGGETIKQICAESGAHVELSRD 337
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRL- 353
+G VIG+GG I+QI+ ++ +++ S + T+ + D A I V+
Sbjct: 44 VGLVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQGSKMSVDRARAMINEVIARA 103
Query: 354 --QPRCSEKIERDSGLISFTTR-----LLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
+P + D G+ T R + +P ++ G +IGKGG I ++ T + ++
Sbjct: 104 GNRPPPNRTGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKM-VM 162
Query: 407 PKENLPKIASEDDEMVQISGDLDLAKDA 434
+EN + + + ++I+GD + ++A
Sbjct: 163 IQEN--QESGGQPKPLRITGDPEKVENA 188
>gi|189238821|ref|XP_968538.2| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein k
[Tribolium castaneum]
gi|270010156|gb|EFA06604.1| hypothetical protein TcasGA2_TC009519 [Tribolium castaneum]
Length = 414
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 24/175 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
D R L P + GSIIG+GG+ + +LR K+ I + + PG E R++T+ S
Sbjct: 20 DEEVRLLIPSKVAGSIIGKGGQNITKLRSQYKASITVPD-CPGPE-RMLTLSS------- 70
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
D D + D + + EE G + G+++ ++++ Q GCVIGK G
Sbjct: 71 --DLDTICNIVTDVVPNL------EENGGRVN---GNELDLRMMIHQSQAGCVIGKAGYK 119
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
++ +R +TGA+I+I + +D ++QI GE S ++ +I + + NP
Sbjct: 120 IKELREKTGARIKIFSN----VAPQSTDRIIQIVGEPSKCVDSIREIITLIKSNP 170
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
+RL+ P G +IGKGG I ++R + A+I V G + ++T+SS DT+
Sbjct: 23 VRLLIPSKVAGSIIGKGGQNITKLRSQYKASITV--PDCPGPERMLTLSSDL---DTICN 77
Query: 346 TIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+ VV P E R +G R+++ S+ GC+IGK G I E+R T A I+I
Sbjct: 78 IVTDVV---PNLEENGGRVNGN-ELDLRMMIHQSQAGCVIGKAGYKIKELREKTGARIKI 133
Query: 406 LPKENLPKIASED-DEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVP 458
+A + D ++QI G+ D++ +++T +++N +G V+ + P
Sbjct: 134 -----FSNVAPQSTDRIIQIVGEPSKCVDSIREIITLIKSNPI--KGIVNPYDP 180
>gi|41053065|dbj|BAD08009.1| putative KH domain protein [Oryza sativa Japonica Group]
Length = 458
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 13/182 (7%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV----------PGSEERV 89
P +V+R + K+G +IGR G+ +K+L DT++++R+ E S + +
Sbjct: 94 PGASVFRLVVATDKVGGLIGRRGDTIKRLCEDTRARVRVLEAAAAAAANRIVDSDSNDFI 153
Query: 90 VTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVI-AEELRGDEDSDGG--HQVTAKLLV 146
V +A E+ + PA DA K+ + E++ D+ G + +AKLLV
Sbjct: 154 AKVTFEMVLISATEESQAELPPAMDAAIKIFMHINDIEKINCDDTLSGSAPEKCSAKLLV 213
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALC 206
PS Q +IGK G +++I+ TGA ++I+ L S + + +V I G V AL
Sbjct: 214 PSAQATHLIGKQGVRIKSIQETTGATVKIIDKVELLSYDVVDERIVDIHGAPLKVLHALK 273
Query: 207 QI 208
+
Sbjct: 274 SV 275
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 25/195 (12%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-DSSSTEGDDCLITVSSKEF-----F 339
RLV +GG+IG+ G I ++ +++ A ++V ++++ + ++ S +F F
Sbjct: 99 FRLVVATDKVGGLIGRRGDTIKRLCEDTRARVRVLEAAAAAAANRIVDSDSNDFIAKVTF 158
Query: 340 EDTL-SATIEAVVRLQPRCS------------EKIERDSGLI-----SFTTRLLVPTSRI 381
E L SAT E+ L P EKI D L + +LLVP+++
Sbjct: 159 EMVLISATEESQAELPPAMDAAIKIFMHINDIEKINCDDTLSGSAPEKCSAKLLVPSAQA 218
Query: 382 GCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTR 441
LIGK G I ++ T A ++I+ K L D+ +V I G AL V+
Sbjct: 219 THLIGKQGVRIKSIQETTGATVKIIDKVELLSYDVVDERIVDIHGAPLKVLHALKSVLGV 278
Query: 442 LRANLFDREGAVSTF 456
LR L D G + F
Sbjct: 279 LRKFLVD-HGVLHLF 292
>gi|195388678|ref|XP_002053006.1| GJ23641 [Drosophila virilis]
gi|194151092|gb|EDW66526.1| GJ23641 [Drosophila virilis]
Length = 574
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 34/199 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS-----STEGDDCLITVSSKEF 338
F ++++ P G +IGKGG I +++++GA +K+ S T CLIT S +
Sbjct: 66 FHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEGI 125
Query: 339 FEDTLSATIEAVVRLQPRCSEKI---------ERDSGLISFTTRLLVPTSRIGCLIGKGG 389
T+ I +R +P + KI ERD + ++LVP S G +IGKGG
Sbjct: 126 M--TVVDFIMDKIREKPDLTTKIIDAESKQAQERDKQV-----KILVPNSTAGMIIGKGG 178
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTR-------- 441
+ I +++ + + ++I K PK S + + I GD + K+A ++++
Sbjct: 179 AFIKQIKEESGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSG 235
Query: 442 --LRANLFDREGAVSTFVP 458
L + D G V+ F P
Sbjct: 236 TCLNVSYADVNGPVANFNP 254
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 92/183 (50%), Gaps = 21/183 (11%)
Query: 42 DTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSAS 96
DT + + L P G+IIG+GGE + L+ DT +++++ ++ PG+ ERV +
Sbjct: 63 DTTFHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLI---- 118
Query: 97 DETNAFEDGDKFVSPAQDALFKVHD---RVIAEELRGDEDSDGGHQVTAKLLVPSDQIGC 153
T + E V D + + D ++I E + ++ D QV K+LVP+ G
Sbjct: 119 --TGSVEGIMTVVDFIMDKIREKPDLTTKIIDAESKQAQERD--KQV--KILVPNSTAGM 172
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
+IGKGG ++ I+ E+G+ ++I + P + + I G+ K A I S++
Sbjct: 173 IIGKGGAFIKQIKEESGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIV 229
Query: 214 DNP 216
++P
Sbjct: 230 EDP 232
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 40/214 (18%), Positives = 85/214 (39%), Gaps = 56/214 (26%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVV 201
K+LVP+ G +IGKGG+ + +++ +TGA++++ K + P R + I+G +
Sbjct: 69 KILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTER---VCLITGSVEGI 125
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
+ I ++ + P
Sbjct: 126 MTVVDFIMDKIREKP--------------------------------------------- 140
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D + + A ++ ++++ P + G +IGKGGA I QI++ESG+ +++
Sbjct: 141 ----DLTTKIIDAESKQAQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQ 196
Query: 322 SSTE---GDDCLITVSSKEFFEDTLSATIEAVVR 352
+ + C+ + KE ++ + +V
Sbjct: 197 KPKDVSLQERCITIIGDKENNKNACKMILSKIVE 230
>gi|405977635|gb|EKC42074.1| Poly(rC)-binding protein 3 [Crassostrea gigas]
Length = 439
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 88/168 (52%), Gaps = 23/168 (13%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ G+ +K+ R D+ +KI I + GS ER+VTV ++ +
Sbjct: 21 KEVGSIIGKKGDNIKKFREDSGAKINISD---GSCPERIVTVTGTTECIHKA-------- 69
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
F + + E+L+ + + VT +L+VP+ Q G +IGKGG ++ IR TG
Sbjct: 70 ------FTMICKKFEEDLQ-NTPTVPKPPVTLRLVVPASQCGSLIGKGGSKIKEIRETTG 122
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
A I++ E LP+ R+ V +SG A + + I S + ++P +
Sbjct: 123 ASIQV-ASEMLPNSTERA---VTVSGTADAITLCIQNICSIMLESPPK 166
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 76/165 (46%), Gaps = 32/165 (19%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS--------TEGD 327
D + ++R++ +G +IGK G I + R++SGA I + S T
Sbjct: 4 NDSVPVSLLTVRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISDGSCPERIVTVTGTT 63
Query: 328 DCL---ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCL 384
+C+ T+ K+F ED ++ P + T RL+VP S+ G L
Sbjct: 64 ECIHKAFTMICKKFEED---------LQNTPTVPKP--------PVTLRLVVPASQCGSL 106
Query: 385 IGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
IGKGGS I E+R T A+I++ E LP + + V +SG D
Sbjct: 107 IGKGGSKIKEIRETTGASIQVA-SEMLP---NSTERAVTVSGTAD 147
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 14/125 (11%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
++ +P+D IGC+IG+GGQ + IR +GA I+I E D V I+G +
Sbjct: 273 EMAIPNDLIGCIIGRGGQKINEIRQMSGAMIKISNAEE-----GAPDRKVTITGTPETIG 327
Query: 203 KA--LCQIASRLHD----NPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY 256
A L + LH +PS S +++ S + P + + + P++ Y
Sbjct: 328 LAQYLINTSMELHKTLTLDPSSSTQNTTPTLTSVQSQHAPMAIPISQ---LAMKPMIVGY 384
Query: 257 GGYKG 261
G G
Sbjct: 385 NGLNG 389
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 26 RRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPG 84
+++ D ++ + R + P + GS+IG+GG +K++R T + I++ E +P
Sbjct: 75 KKFEEDLQNTPTVPKPPVTLRLVVPASQCGSLIGKGGSKIKEIRETTGASIQVASEMLPN 134
Query: 85 SEERVVTVYSASD 97
S ER VTV +D
Sbjct: 135 STERAVTVSGTAD 147
>gi|170573376|ref|XP_001892446.1| KH domain containing protein [Brugia malayi]
gi|158602012|gb|EDP38733.1| KH domain containing protein [Brugia malayi]
Length = 579
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 152/376 (40%), Gaps = 79/376 (21%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFV 109
P +G +IGRGGE + Q++ T ++++ G+ R T+ + D+
Sbjct: 40 PDHCVGLVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQGSKMSV------DRAR 93
Query: 110 SPAQDALFKVHDRVI---AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIR 166
+ + + + +R A G G Q+T ++ +P + G VIGKGG+ ++NI+
Sbjct: 94 AMINEVIARAGNRPPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQ 153
Query: 167 SETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASA 226
+TG ++ ++++ + ++I+G+ V+ A + L SR H
Sbjct: 154 EQTGVKMVMIQENQESGGQPKP---LRITGDPEKVENARRMVEEILQ---SREDH----- 202
Query: 227 ISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSL 286
P + G G + G S PR
Sbjct: 203 -----------------------PPGHFGFPGSFGISGGQRSIGEVIVPR---------- 229
Query: 287 RLVCPVANIGGVIGKGGAIINQIRQESGAAI--KVDSSSTEGDDCLITVSSKEFFEDTLS 344
A++G +IGKGG I ++ ESGA I K D T + C + +
Sbjct: 230 ------ASVGMIIGKGGETIKRLAAESGAKIQFKPDDDQTAQERCAV-----------IQ 272
Query: 345 ATIEAVVRLQPRCSEKIERD---SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
T E + + SE +++ G F + VP+++ G +IGKGG I ++ + A
Sbjct: 273 GTAEQIAKATQFISELVKKSGAAGGAEMF--YMHVPSNKTGLVIGKGGETIKQICAESGA 330
Query: 402 NIRILPKENLPKIASE 417
++ + + P ASE
Sbjct: 331 HVEL--SRDPPPNASE 344
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 77/160 (48%), Gaps = 24/160 (15%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
DH P + G I G + ++ + P +G IIG+GGE +K+L ++ +KI+
Sbjct: 201 DHPPGHFGFPGSFG---ISGGQRSIGEVIVPRASVGMIIGKGGETIKRLAAESGAKIQFK 257
Query: 80 -ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH 138
+ ++ER + +++ +F+S EL + GG
Sbjct: 258 PDDDQTAQERCAVIQGTAEQ---IAKATQFIS----------------ELVKKSGAAGGA 298
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD 178
++ + VPS++ G VIGKGG+ ++ I +E+GA + + +D
Sbjct: 299 EMF-YMHVPSNKTGLVIGKGGETIKQICAESGAHVELSRD 337
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRL- 353
+G VIG+GG I+QI+ ++ +++ S + T+ + D A I V+
Sbjct: 44 VGLVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQGSKMSVDRARAMINEVIARA 103
Query: 354 --QPRCSEKIERDSGLISFTTR-----LLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
+P + D G+ T R + +P ++ G +IGKGG I ++ T + ++
Sbjct: 104 GNRPPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKM-VM 162
Query: 407 PKENLPKIASEDDEMVQISGDLDLAKDA 434
+EN + + + ++I+GD + ++A
Sbjct: 163 IQEN--QESGGQPKPLRITGDPEKVENA 188
>gi|225429462|ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259454 [Vitis vinifera]
Length = 690
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 87/161 (54%), Gaps = 18/161 (11%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV---PGSEERVVTVYSASDETNAFEDGD 106
P ++G IIG+GGE +K L++ + +KI++ + P S R+V + D+ +
Sbjct: 143 PNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQ---IAKAE 199
Query: 107 KFVSPAQDALFKVH---DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
+ ++ D L + +++ L G S+ Q K VP++++G +IGKGG+ ++
Sbjct: 200 QLIN---DVLSEAEAGGSGIVSRRLTGQAGSE---QFVMK--VPNNKVGLIIGKGGETIK 251
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
N+++ TGA+I+++ HLP + VQI G + ++ A
Sbjct: 252 NMQARTGARIQVIP-LHLPPGDTSMERTVQIDGTSEQIESA 291
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 20/173 (11%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-------DSSSTEGDDCLIT----V 333
S ++ P +G +IGKGG I ++ +SGA I+V +S T + + T
Sbjct: 137 SKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQIA 196
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+++ D LS EA S ++ +G F + VP +++G +IGKGG I
Sbjct: 197 KAEQLINDVLS---EAEAGGSGIVSRRLTGQAGSEQFV--MKVPNNKVGLIIGKGGETIK 251
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISG---DLDLAKDALIQVMTRLR 443
M+ T A I+++P +LP + + VQI G ++ AK + +V++ R
Sbjct: 252 NMQARTGARIQVIPL-HLPPGDTSMERTVQIDGTSEQIESAKQLVNEVISENR 303
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 83/185 (44%), Gaps = 55/185 (29%)
Query: 137 GHQVTAKLL-VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQI 194
G+Q T+K + +P+ ++G +IGKGG+ ++ ++ ++GA+I++ +D + P+ R LV++
Sbjct: 132 GYQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTR---LVEL 188
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG 254
G + KA + L+ +S + + +V
Sbjct: 189 MGTPDQIAKA---------------EQLINDVLSEAEAGGSGIV---------------- 217
Query: 255 PYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
SR L S++F +++ P +G +IGKGG I ++ +G
Sbjct: 218 -------------SRRL----TGQAGSEQFVMKV--PNNKVGLIIGKGGETIKNMQARTG 258
Query: 315 AAIKV 319
A I+V
Sbjct: 259 ARIQV 263
>gi|76157738|gb|AAX28573.2| SJCHGC01935 protein [Schistosoma japonicum]
Length = 263
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 84/167 (50%), Gaps = 16/167 (9%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
GP P R +G +IG+GGE + QL+ DT+ K++I + G+ ER VT+ +
Sbjct: 94 GPRVVTTETAIPDRFVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQ 151
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGK 157
+ A+ + + +R + G T +++VP + G VIGK
Sbjct: 152 ----------IDHAKQMIGDIIERAGKNGTPTTTTYNSTGSITTIEMMVPGLKAGLVIGK 201
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
G+ ++N++ E G ++ +++ + P+ D+ ++ISGE S V+KA
Sbjct: 202 NGETIKNLQEENGVKMVLIQQSNNPTP---EDKPLRISGEPSRVEKA 245
>gi|444519891|gb|ELV12903.1| Poly(rC)-binding protein 3 [Tupaia chinensis]
Length = 300
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 122/274 (44%), Gaps = 36/274 (13%)
Query: 67 QLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAE 126
+L + KS RI + ER+VT+ +D F + A A +K + +I
Sbjct: 17 RLLMHGKSGARINISEGNCPERIVTITGPTDAI--------FKAFAMIA-YKFEEDIINS 67
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
+ + VT +L+VP+ Q G +IGKGG ++ IR TGAQ+++ D LP+
Sbjct: 68 --MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGD-MLPNSTE 124
Query: 187 RSDELVQISGEASVVKKALCQIASRLHDNPSR------------SQHLLASAISNSHSSS 234
R+ V ISG + + + QI + ++P + + + A + +
Sbjct: 125 RA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQ 181
Query: 235 GSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
++ P T + +A P+ G T + P D S + L P
Sbjct: 182 YAIPHPDQLTKLHQLAMQQTPFPPL-GQTNPAF-------PGLDASPPASTHELTIPNDL 233
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 234 IGCIIGRQGTKINEIRQMSGAQIKI-ANATEGSS 266
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 56/216 (25%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET----- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 82 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVK 141
Query: 100 --------------------------------NAFEDGDKFVSPAQDALFKVHDRVIAE- 126
A+ ++ P D L K+H + +
Sbjct: 142 QICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQT 201
Query: 127 ----------ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
G + S T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 202 PFPPLGQTNPAFPGLDASPPAS--THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 259
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+ S+ + I+G + + A I +RL
Sbjct: 260 N-----ATEGSSERQITITGTPANISLAQYLINARL 290
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T RL+VP S+ G LIGKGGS I E+R T A +++ + LP + + V ISG
Sbjct: 80 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISG---- 131
Query: 431 AKDALIQVMTRLRANLFDR--EGAVSTFVP 458
DA+IQ + ++ + + +GA + P
Sbjct: 132 TPDAIIQCVKQICVVMLESPPKGATIPYRP 161
>gi|160773967|gb|AAI55088.1| Igf2bp2 protein [Danio rerio]
Length = 261
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 35/218 (16%)
Query: 233 SSGSLVGPTAATPIVGIAPL----MGPYGGYKGDTAGDWSRSLYSAP------RDDLSSK 282
S+G V P AA P GI P+ P+ G+ G LY P +++
Sbjct: 34 STGLSVLPPAAGP-RGIPPVPPTGYNPFLGHSSQLGG-----LYGVPPASGISHQHTATE 87
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
+ + L P +G +IGK G I Q+ + +GA+IK+ + + + +
Sbjct: 88 QEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVI--------- 138
Query: 343 LSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
++ EA + Q R K++ ++ + T + VP+S G +IGKGG + E++
Sbjct: 139 ITGPPEAQFKAQGRIFGKLKEENFFTAKEEVKLETHIKVPSSAAGRVIGKGGRTVNELQN 198
Query: 398 LTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
LT A + I+P++ P E+DE V+ISG ++ A
Sbjct: 199 LTSAEV-IVPRDQTP---DENDEVFVKISGHFFASQTA 232
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 23/159 (14%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSASDET 99
++ VY ++ P + +G+IIG+ G+ +KQL + I+I P +R+V + + E
Sbjct: 88 QEVVYLFI-PTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVII-TGPPEA 145
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
G F ++ F + V ++ + VPS G VIGKGG
Sbjct: 146 QFKAQGRIFGKLKEENFFTAKEEV---------------KLETHIKVPSSAAGRVIGKGG 190
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGE 197
+ V +++ T A++ + +D+ +DE V+ISG
Sbjct: 191 RTVNELQNLTSAEVIVPRDQ----TPDENDEVFVKISGH 225
>gi|74141926|dbj|BAE41029.1| unnamed protein product [Mus musculus]
Length = 278
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 92/180 (51%), Gaps = 31/180 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|57525224|ref|NP_001006199.1| far upstream element-binding protein 3 [Gallus gallus]
gi|53127676|emb|CAG31167.1| hypothetical protein RCJMB04_2o21 [Gallus gallus]
Length = 539
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 88/158 (55%), Gaps = 15/158 (9%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGD 106
+ P + +G IIGRGGE + +++I++ KI+I G ER V + + E+
Sbjct: 100 FKVPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPERPC-VLTGTPES------- 151
Query: 107 KFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIR 166
+ A+ L ++ DR G + G+ ++L+P+ ++G VIGKGG+ ++ ++
Sbjct: 152 --IEQAKRLLGQIVDR--CRNGPGFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQ 207
Query: 167 SETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
TG ++ +++D +P+ A D+ ++I+G+A V++A
Sbjct: 208 ERTGVKMIMIQDGPMPTGA---DKPLRITGDAFKVQQA 242
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 8/156 (5%)
Query: 290 CPVANIGGVIGKGGAIINQIRQESGAAIKV--DSSSTEGDDCLITVSSKEFFEDTLSATI 347
P +G +IG+GG I++I+ ESG I++ DS C++T + E E
Sbjct: 102 VPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPERPCVLT-GTPESIEQAKRLLG 160
Query: 348 EAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILP 407
+ V R R D S +L+P S++G +IGKGG I +++ T + ++
Sbjct: 161 QIVDRC--RNGPGFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQ 218
Query: 408 KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
+P A D+ ++I+GD + A V+ +R
Sbjct: 219 DGPMPTGA---DKPLRITGDAFKVQQAREMVLEIIR 251
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 121/291 (41%), Gaps = 59/291 (20%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T+ L P K+G +IG+GGE +KQL+ T K+ + + P + + +D+
Sbjct: 181 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGP--------MPTGADKPLRI 232
Query: 103 EDGDKF-VSPAQDALFKV---HDRVIAEELRGDEDSD-GGHQVTAKLLVPSDQIGCVIGK 157
GD F V A++ + ++ D+ +R D S GG + ++ VP +G VIG+
Sbjct: 233 -TGDAFKVQQAREMVLEIIREKDQADFRGVRNDFSSRMGGGSI--EVSVPRFAVGIVIGR 289
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
G++++ I+++ G +I+ D+ + + + Q+ G L D
Sbjct: 290 NGEMIKKIQNDAGVRIQFKPDD-----GISPERVAQVMG---------------LPDRCQ 329
Query: 218 RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD 277
+ H+++ I + G G A +G GDWS ++
Sbjct: 330 HAAHIISELILTAQERDG--FGSLAVA-------------RGRGRGRGDWSVGTPGGMQE 374
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P G VIGKGG I I Q+SGA +++ + D
Sbjct: 375 --------ITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTD 417
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 64/145 (44%), Gaps = 13/145 (8%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV--DSSSTEGDDCLITV 333
+D+ ++ P + +G VIGKGG I Q+++ +G + + D G D + +
Sbjct: 173 HNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPMPTGADKPLRI 232
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRL-------LVPTSRIGCLIG 386
+ F + ++R + + + R+ F++R+ VP +G +IG
Sbjct: 233 TGDAFKVQQAREMVLEIIREKDQADFRGVRN----DFSSRMGGGSIEVSVPRFAVGIVIG 288
Query: 387 KGGSIITEMRRLTKANIRILPKENL 411
+ G +I +++ I+ P + +
Sbjct: 289 RNGEMIKKIQNDAGVRIQFKPDDGI 313
>gi|393909303|gb|EJD75396.1| hypothetical protein LOAG_17442 [Loa loa]
Length = 585
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 120/272 (44%), Gaps = 55/272 (20%)
Query: 22 GP-NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG- 79
GP K+ + D D + + L P +G++IG+GGE ++ L+ ++ ++++
Sbjct: 40 GPATKKAHVSDTEDNIV------QVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSK 93
Query: 80 --ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGG 137
E PG+ ER+ V K S + KV D VI E++R D++
Sbjct: 94 NQEVYPGTNERICLVKG------------KIAS-----VLKVSD-VILEKIREKVDNNTP 135
Query: 138 HQV----------TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR 187
+ KL+VP+ G VIGK G ++ IR +TGA I++ +
Sbjct: 136 SDIFDHKGMERKNEMKLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAKVS 195
Query: 188 SDELVQISGEA-SVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPI 246
+ ++ I+ E V+ AL ++ ++ +P QH +A+ + S G P
Sbjct: 196 QERIITIAAEQDEVLMDALQRVLEKVAADP---QHAMATIPDHKDDSFG---------PA 243
Query: 247 VGIAPLMGPYGGYKGDTAG--DWSRSLYSAPR 276
G+ L G GG +G T D+S +AP+
Sbjct: 244 SGL--LHGIGGGVQGQTIQPFDFSNRSQNAPQ 273
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 87/175 (49%), Gaps = 23/175 (13%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKEFFE 340
++++ P A +G +IGKGG + ++ ESG +++ + T CL+ +
Sbjct: 58 VKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLV--------K 109
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISF---------TTRLLVPTSRIGCLIGKGGSI 391
+++ ++ + + EK++ ++ F +L+VP + G +IGK G+
Sbjct: 110 GKIASVLKVSDVILEKIREKVDNNTPSDIFDHKGMERKNEMKLVVPNTSAGMVIGKSGAR 169
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD-LAKDALIQVMTRLRAN 445
I E+R T ANI++ PK + + ++ I+ + D + DAL +V+ ++ A+
Sbjct: 170 IKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEVLMDALQRVLEKVAAD 224
>gi|194903195|ref|XP_001980824.1| GG16798 [Drosophila erecta]
gi|190652527|gb|EDV49782.1| GG16798 [Drosophila erecta]
Length = 572
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 46/205 (22%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS-----STEGDDCLITVSSK-- 336
+ ++++ P G +IGKGG I +++++GA +K+ S T CLIT S++
Sbjct: 66 YHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAI 125
Query: 337 ----EFFEDTLSATIEAVVRLQPRCSEKI---------ERDSGLISFTTRLLVPTSRIGC 383
EF D +R +P + KI ERD + ++LVP S G
Sbjct: 126 MVVLEFIMDK--------IREKPDLTNKIVDAESKQTQERDKQV-----KILVPNSTAGM 172
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTR-- 441
+IGKGG+ I +++ + + ++I K PK S + + I GD + K+A ++++
Sbjct: 173 IIGKGGAFIKQIKEESGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIV 229
Query: 442 --------LRANLFDREGAVSTFVP 458
L + D G V+ F P
Sbjct: 230 EDPQSGTCLNVSYADVSGPVANFNP 254
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 92/180 (51%), Gaps = 15/180 (8%)
Query: 42 DTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSAS 96
+T Y + L P G+IIG+GGE + L+ DT +++++ ++ PG+ ERV + +
Sbjct: 63 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLI---T 119
Query: 97 DETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
T A +F+ + ++++ E + ++ D QV K+LVP+ G +IG
Sbjct: 120 GSTEAIMVVLEFIMDKIREKPDLTNKIVDAESKQTQERD--KQV--KILVPNSTAGMIIG 175
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KGG ++ I+ E+G+ ++I + P + + I G+ K A I S++ ++P
Sbjct: 176 KGGAFIKQIKEESGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIVEDP 232
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 85/214 (39%), Gaps = 56/214 (26%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVV 201
K+LVP+ G +IGKGG+ + +++ +TGA++++ K + P R + I+G +
Sbjct: 69 KILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTER---VCLITGSTEAI 125
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
L I ++ + P
Sbjct: 126 MVVLEFIMDKIREKP--------------------------------------------- 140
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D + + A ++ ++++ P + G +IGKGGA I QI++ESG+ +++
Sbjct: 141 ----DLTNKIVDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQ 196
Query: 322 SSTE---GDDCLITVSSKEFFEDTLSATIEAVVR 352
+ + C+ + KE ++ + +V
Sbjct: 197 KPKDVSLQERCITIIGDKENNKNACKMILSKIVE 230
>gi|195499424|ref|XP_002096942.1| GE25952 [Drosophila yakuba]
gi|194183043|gb|EDW96654.1| GE25952 [Drosophila yakuba]
Length = 572
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 46/205 (22%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS-----STEGDDCLITVSSK-- 336
+ ++++ P G +IGKGG I +++++GA +K+ S T CLIT S++
Sbjct: 66 YHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAI 125
Query: 337 ----EFFEDTLSATIEAVVRLQPRCSEKI---------ERDSGLISFTTRLLVPTSRIGC 383
EF D +R +P + KI ERD + ++LVP S G
Sbjct: 126 MVVLEFIMDK--------IREKPDLTNKIVDVESKQTQERDKQV-----KILVPNSTAGM 172
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTR-- 441
+IGKGG+ I +++ + + ++I K PK S + + I GD + K+A ++++
Sbjct: 173 IIGKGGAFIKQIKEESGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIV 229
Query: 442 --------LRANLFDREGAVSTFVP 458
L + D G V+ F P
Sbjct: 230 EDPQSGTCLNVSYADVSGPVANFNP 254
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 92/180 (51%), Gaps = 15/180 (8%)
Query: 42 DTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSAS 96
+T Y + L P G+IIG+GGE + L+ DT +++++ ++ PG+ ERV + +
Sbjct: 63 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLI---T 119
Query: 97 DETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
T A +F+ + ++++ E + ++ D QV K+LVP+ G +IG
Sbjct: 120 GSTEAIMVVLEFIMDKIREKPDLTNKIVDVESKQTQERD--KQV--KILVPNSTAGMIIG 175
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KGG ++ I+ E+G+ ++I + P + + I G+ K A I S++ ++P
Sbjct: 176 KGGAFIKQIKEESGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIVEDP 232
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/214 (18%), Positives = 84/214 (39%), Gaps = 56/214 (26%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVV 201
K+LVP+ G +IGKGG+ + +++ +TGA++++ K + P R + I+G +
Sbjct: 69 KILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTER---VCLITGSTEAI 125
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
L I ++ + P
Sbjct: 126 MVVLEFIMDKIREKP--------------------------------------------- 140
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D + + ++ ++++ P + G +IGKGGA I QI++ESG+ +++
Sbjct: 141 ----DLTNKIVDVESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQ 196
Query: 322 SSTE---GDDCLITVSSKEFFEDTLSATIEAVVR 352
+ + C+ + KE ++ + +V
Sbjct: 197 KPKDVSLQERCITIIGDKENNKNACKMILSKIVE 230
>gi|385302954|gb|EIF47057.1| rna binding protein [Dekkera bruxellensis AWRI1499]
Length = 339
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 139/341 (40%), Gaps = 69/341 (20%)
Query: 6 NSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
N++ + SH + + +K + IG YR L R+ G+IIGR G+ +
Sbjct: 10 NNFTEESHEAQENVEPXEDK---------EVDIGKTLITYRVLVSRREAGAIIGRNGDNI 60
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSASD--------------ETNA---FEDGDKF 108
++R D K + + V G +R++ V D E NA + +K
Sbjct: 61 TRIRNDNNVKAGVSKVVEGCIDRILIVTGMVDNVPNALVSIAKSVAEANAETVRQANEKG 120
Query: 109 VSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSE 168
P ++ + G D + + +LL+P+ Q+G +IGKGG ++ I+
Sbjct: 121 TDPTSLITYEYFPLKPLTQRPGPNDPEYAETLFLRLLIPNVQMGTLIGKGGSRIKGIQES 180
Query: 169 TGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAIS 228
++ + +L + R LV++ G V+KAL +I S+ LL
Sbjct: 181 CDVKM-VASKGYLENSTER---LVELLGREENVRKALAEI----------SRCLLCDF-- 224
Query: 229 NSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSS-KEFSLR 287
+ + + P+ + P Y R++ ++ KE +
Sbjct: 225 -QGAVTATFYTPSTSMP-------------------------SYRRRRENRTTGKELIRK 258
Query: 288 LVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P IG +IG+ G+ I ++R+ S AI ++S S +G +
Sbjct: 259 ISFPNEYIGALIGRRGSRIQEVRRSSNCAIAIESDSQBGSE 299
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 122/320 (38%), Gaps = 57/320 (17%)
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-VTAKLLVPSDQIGCVIGKGGQIVQ 163
G+ F + +A V E D++ D G +T ++LV + G +IG+ G +
Sbjct: 9 GNNFTEESHEAQENV-------EPXEDKEVDIGKTLITYRVLVSRREAGAIIGRNGDNIT 61
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLL 223
IR++ + + K + C D ++ ++G V AL IA + +
Sbjct: 62 RIRNDNNVKAGVSK--VVEGCI---DRILIVTGMVDNVPNALVSIAKSVAE--------- 107
Query: 224 ASAISNSHSSSGSLVGPTAATPIVGIAPL-MGPYGGYKGDTAGDWSRSLYSAPRDDLSSK 282
+N+ + + T T ++ + P G +++ +L+
Sbjct: 108 ----ANAETVRQANEKGTDPTSLITYEYFPLKPLTQRPGPNDPEYAETLF---------- 153
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEF--- 338
LRL+ P +G +IGKGG+ I I++ + E + L+ + +E
Sbjct: 154 ---LRLLIPNVQMGTLIGKGGSRIKGIQESCDVKMVASKGYLENSTERLVELLGREENVR 210
Query: 339 -------------FEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLI 385
F+ ++AT P + E + ++ P IG LI
Sbjct: 211 KALAEISRCLLCDFQGAVTATFYTPSTSMPSYRRRRENRTTGKELIRKISFPNEYIGALI 270
Query: 386 GKGGSIITEMRRLTKANIRI 405
G+ GS I E+RR + I I
Sbjct: 271 GRRGSRIQEVRRSSNCAIAI 290
>gi|322707130|gb|EFY98709.1| KH domain RNA-binding protein [Metarhizium anisopliae ARSEF 23]
Length = 368
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 134/287 (46%), Gaps = 28/287 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + ++ G IIG+GG+ V LR +T K + + V G +RV+T+ + E +A
Sbjct: 50 RAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTI---TGECDAISRA 106
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
V+ A + + A + G S+G H + KLL+ +Q+G +IG+ G +++I
Sbjct: 107 YAIVARA------LLEGAPAMGMGGIVQSNGTHPI--KLLISHNQMGTIIGRQGLKIKHI 158
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR-SQHLLA 224
+ +G ++ + + E LP R +V++ G +++A+ +I L D+ R + +L
Sbjct: 159 QDVSGVRM-VAQKEMLPQSTER---IVEVQGTPDGIQRAVWEICKCLVDDWQRGTGTVLY 214
Query: 225 SAISNSHSSSGSL---VGPTAATPIVGIAPLMGPYGGYKGDTAG--------DWSRSLYS 273
+ + + + SGSL G +M G G D +
Sbjct: 215 NPVVRTQAGSGSLGSNYNNGGGRSDYGSPRVMRTGNGADFSNGGVRPFSRRSDSDAASRG 274
Query: 274 APRDDLSSKEFSLRLVC-PVANIGGVIGKGGAIINQIRQESGAAIKV 319
P D + +E + + P +G +IG+ G+ I++IR+ SGA I +
Sbjct: 275 PPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISI 321
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
D +G T + +P+D +GC+IG+ G + IR +GA+I I K H + + +
Sbjct: 279 DENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDET----GERMF 334
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHL 222
I G A + AL + L R L
Sbjct: 335 TIMGTAKANESALFLLYENLEAEKMRRSQL 364
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 11/77 (14%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQI---RILKDEHLPSCALRSDELVQIS 195
Q+T + +V S + G +IGKGG+ V ++R ETG + ++++ H D ++ I+
Sbjct: 46 QLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVH--------DRVLTIT 97
Query: 196 GEASVVKKALCQIASRL 212
GE + +A +A L
Sbjct: 98 GECDAISRAYAIVARAL 114
>gi|198458337|ref|XP_002138531.1| GA24337 [Drosophila pseudoobscura pseudoobscura]
gi|198136305|gb|EDY69089.1| GA24337 [Drosophila pseudoobscura pseudoobscura]
Length = 505
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 31/193 (16%)
Query: 274 APRDDLSSK--EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
P+D ++ E ++R++ P + G VIGKGG I ++R + AA+ VD S +G + I
Sbjct: 11 GPQDQKRNRRNEDTVRILIPSSIAGAVIGKGGQHIQKMRTQYKAAVSVDDS--QGPERTI 68
Query: 332 TVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSI 391
+S+ + AT+E + + E+ E F RLL+ S GC+IGKGG
Sbjct: 69 QISAD------IEATLEIITEMLKYFEERDE------DFDVRLLIHQSLAGCVIGKGGQK 116
Query: 392 ITEMR-----RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
I E+R R K + P+ D +VQ G +A+ +V+T R
Sbjct: 117 IKEIRDRIGCRFLKVFSNVAPQST--------DRVVQTVGKQAQVIEAVREVITLTRDTP 168
Query: 447 FDREGAVSTFVPV 459
+GA+ + P+
Sbjct: 169 I--KGAIHNYDPM 179
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 29/176 (16%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
EDTV R L P G++IG+GG+ ++++R K+ + + ++ ER + + ++D
Sbjct: 22 EDTV-RILIPSSIAGAVIGKGGQHIQKMRTQYKAAVSVDDSQ--GPERTIQI--SADIEA 76
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E +I E L+ E+ D V +LL+ GCVIGKGGQ
Sbjct: 77 TLE-------------------IITEMLKYFEERDEDFDV--RLLIHQSLAGCVIGKGGQ 115
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
++ IR G + + P +D +VQ G+ + V +A+ ++ + D P
Sbjct: 116 KIKEIRDRIGCRFLKVFSNVAPQS---TDRVVQTVGKQAQVIEAVREVITLTRDTP 168
>gi|195445981|ref|XP_002070572.1| GK10958 [Drosophila willistoni]
gi|194166657|gb|EDW81558.1| GK10958 [Drosophila willistoni]
Length = 578
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 34/199 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS-----STEGDDCLITVSSKEF 338
+ ++++ P G +IGKGG I +++++GA +K+ S T CLIT S++
Sbjct: 66 YHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEGI 125
Query: 339 FEDTLSATIEAVVRLQPRCSEKI---------ERDSGLISFTTRLLVPTSRIGCLIGKGG 389
T+ I +R +P + KI ERD + ++LVP S G +IGKGG
Sbjct: 126 M--TVLDFIMDKIREKPDLTTKIIDAESKQTQERDKQV-----KILVPNSTAGMIIGKGG 178
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTR-------- 441
+ I +++ + + ++I K PK S + + I GD + K+A ++++
Sbjct: 179 AFIKQIKEESGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSG 235
Query: 442 --LRANLFDREGAVSTFVP 458
L + D G V+ F P
Sbjct: 236 TCLNVSYADVSGPVANFNP 254
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 91/180 (50%), Gaps = 15/180 (8%)
Query: 42 DTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSAS 96
D+ Y + L P G+IIG+GGE + L+ DT +++++ ++ PG+ ERV + ++
Sbjct: 63 DSTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 122
Query: 97 DETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
+ D F+ + ++I E + ++ D QV K+LVP+ G +IG
Sbjct: 123 EGIMTVLD---FIMDKIREKPDLTTKIIDAESKQTQERD--KQV--KILVPNSTAGMIIG 175
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KGG ++ I+ E+G+ ++I + P + + I G+ K A I S++ ++P
Sbjct: 176 KGGAFIKQIKEESGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIVEDP 232
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 85/214 (39%), Gaps = 56/214 (26%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVV 201
K+LVP+ G +IGKGG+ + +++ +TGA++++ K + P R + I+G +
Sbjct: 69 KILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTER---VCLITGSTEGI 125
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
L I ++ + P
Sbjct: 126 MTVLDFIMDKIREKP--------------------------------------------- 140
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D + + A ++ ++++ P + G +IGKGGA I QI++ESG+ +++
Sbjct: 141 ----DLTTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQ 196
Query: 322 SSTE---GDDCLITVSSKEFFEDTLSATIEAVVR 352
+ + C+ + KE ++ + +V
Sbjct: 197 KPKDVSLQERCITIIGDKENNKNACKMILSKIVE 230
>gi|171687621|ref|XP_001908751.1| hypothetical protein [Podospora anserina S mat+]
gi|170943772|emb|CAP69424.1| unnamed protein product [Podospora anserina S mat+]
Length = 500
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 159/389 (40%), Gaps = 45/389 (11%)
Query: 56 SIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDA 115
+IIG+GGE V ++R + +K + + G+ ER++TV D A
Sbjct: 148 TIIGKGGENVSKIRQSSGAKCTVSDYQKGAVERILTVSGVVD--------------AAAK 193
Query: 116 LFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
F + R + E + + +LL+P IG +IGKGG ++ I+ +GA++
Sbjct: 194 AFGLIIRTLNNEPLSEPSNQHSKTYPLRLLIPHVLIGSIIGKGGSRIKEIQEASGARLN- 252
Query: 176 LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSG 235
D LP+ + RS LV ++G A V A + S L + ++ +A S + SG
Sbjct: 253 ASDSCLPASSERS--LV-VTGVADAVHIATYYVGSTLLEQ--LNERFGGAAASAYATRSG 307
Query: 236 SLVGPTAATPIVGIAPLMG-PYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
GP A T + + P + P GG G R Y+ R D + P
Sbjct: 308 ---GPAAVTGGMTVVPYVPQPAGGNFGQ------RDHYNNRRPDPRAHHM------PPQA 352
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ 354
GG G G A+ + + + + + +
Sbjct: 353 YGGAPQYGAY---PQAAHPGPAVPMHFAGAQAAGGYGPAAPHMPPHAGHAGHVGPQPHTG 409
Query: 355 PRCSEKIERDSGLISFTTR-LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPK 413
P + T+ + +P +G +IGKGG I E+R+++ + I+I N P+
Sbjct: 410 PHGPQAAGSGGAAGGPMTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKI----NEPQ 465
Query: 414 IASEDDEMVQISGDLDLAKDALIQVMTRL 442
S ++ +V I+G + K AL + TRL
Sbjct: 466 DNS-NERLVTITGTDECNKMALYMLYTRL 493
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 12/211 (5%)
Query: 246 IVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAI 305
+V AP P DTA +++ A D ++ +R V +IGKGG
Sbjct: 98 VVPDAPETKPTTSTTVDTASSEAQANPPAESRDETAW-IHIRAVISSPEAATIIGKGGEN 156
Query: 306 INQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDS 365
+++IRQ SGA V + ++TVS D + ++R +E + S
Sbjct: 157 VSKIRQSSGAKCTVSDYQKGAVERILTVSG---VVDAAAKAFGLIIRT--LNNEPLSEPS 211
Query: 366 GLIS--FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQ 423
S + RLL+P IG +IGKGGS I E++ + A + LP AS + +V
Sbjct: 212 NQHSKTYPLRLLIPHVLIGSIIGKGGSRIKEIQEASGARLNAS-DSCLP--ASSERSLV- 267
Query: 424 ISGDLDLAKDALIQVMTRLRANLFDREGAVS 454
++G D A V + L L +R G +
Sbjct: 268 VTGVADAVHIATYYVGSTLLEQLNERFGGAA 298
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T ++ +P+D +G +IGKGGQ + IR +G+ I+I + + ++ LV I+G
Sbjct: 426 MTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD-----NSNERLVTITGTDE 480
Query: 200 VVKKALCQIASRLHDNPSR 218
K AL + +RL + R
Sbjct: 481 CNKMALYMLYTRLENEKHR 499
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 13/80 (16%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFV 109
P +G+IIG+GG+ + ++R + S I+I E S ER+VT+ + +DE N
Sbjct: 433 PNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTI-TGTDECNKM------- 484
Query: 110 SPAQDALFKVHDRVIAEELR 129
AL+ ++ R+ E+ R
Sbjct: 485 -----ALYMLYTRLENEKHR 499
>gi|307213191|gb|EFN88688.1| RNA-binding protein Nova-1 [Harpegnathos saltator]
Length = 514
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 99/205 (48%), Gaps = 25/205 (12%)
Query: 19 ADHGPNKRRYTGDDRDQFIIGPEDTVY-RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIR 77
A++G KR + G G + T + + L P G+IIG+GG+ + QL+ DT ++++
Sbjct: 27 AENGATKRSHYGS-------GGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVK 79
Query: 78 IGET---VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDS 134
+ ++ PG+ ERV + + + A D F+ + + + G +
Sbjct: 80 MSKSHDFYPGTTERVCLITGSVEAIMAVMD---FIMEKIREKPDLTSKTTVDFDSGKATA 136
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI---LKDEHLPSCALRSDEL 191
+ QV K+LVP+ G +IGK G ++ I+ E+G+ ++I KD L +
Sbjct: 137 ERDKQV--KILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDLSL------QERC 188
Query: 192 VQISGEASVVKKALCQIASRLHDNP 216
+ + GE + AL I +++ D+P
Sbjct: 189 ITVIGEKENNRNALLMILAKVADDP 213
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 50/226 (22%)
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS-- 322
G RS Y + D + L+++ P G +IGKGG I Q+++++GA +K+ S
Sbjct: 30 GATKRSHYGSGGDG----TYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHD 85
Query: 323 ---STEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT------- 372
T CLIT ++EA++ + EKI L S TT
Sbjct: 86 FYPGTTERVCLIT------------GSVEAIMAVMDFIMEKIREKPDLTSKTTVDFDSGK 133
Query: 373 ---------RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQ 423
++LVP S G +IGK G+ I +++ + + ++I K K S + +
Sbjct: 134 ATAERDKQVKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKA---KDLSLQERCIT 190
Query: 424 ISGDLDLAKDALIQVMTR----------LRANLFDREGAVSTFVPV 459
+ G+ + ++AL+ ++ + L + D G V+ + P
Sbjct: 191 VIGEKENNRNALLMILAKVADDPQSGTCLNVSYADVSGPVANYNPT 236
>gi|195486812|ref|XP_002091665.1| GE12124 [Drosophila yakuba]
gi|194177766|gb|EDW91377.1| GE12124 [Drosophila yakuba]
Length = 497
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 29/183 (15%)
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFED 341
E ++R++ P + G VIGKGG I ++R + A + VD S +G + I +S+
Sbjct: 21 NEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDS--QGPERTIQISAD----- 73
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMR----- 396
+ +T+E + + E+ E F RLL+ S GC+IGKGG I E+R
Sbjct: 74 -IESTLEIITEMLKYFEERDE------DFDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGC 126
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
R K + P+ D +VQ G DA+ +V+T R +GA+ +
Sbjct: 127 RFLKVFSNVAPQST--------DRVVQTVGKQSQVIDAVREVITLTRDTPI--KGAIHNY 176
Query: 457 VPV 459
P+
Sbjct: 177 DPM 179
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 29/176 (16%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+TV R L P G++IG+GG+ ++++R K+ + + ++ ER + + ++D +
Sbjct: 22 EETV-RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDS--QGPERTIQI--SADIES 76
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E +I E L+ E+ D V +LL+ GCVIGKGGQ
Sbjct: 77 TLE-------------------IITEMLKYFEERDEDFDV--RLLIHQSLAGCVIGKGGQ 115
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
++ IR G + + P +D +VQ G+ S V A+ ++ + D P
Sbjct: 116 KIKEIRDRIGCRFLKVFSNVAPQS---TDRVVQTVGKQSQVIDAVREVITLTRDTP 168
>gi|403256748|ref|XP_003921014.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3 [Saimiri boliviensis boliviensis]
Length = 611
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 133/296 (44%), Gaps = 55/296 (18%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGD 106
+ P + +G IIGRGGE + +++ ++ KI+I G ER V + + E+
Sbjct: 184 FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPC-VLTGTPES------- 235
Query: 107 KFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ A+ L ++ DR D DS+ ++L+P+ ++G VIG+GG+ ++ +
Sbjct: 236 --IEQAKRLLGQIVDRCRNGPGFHNDIDSN---STIQEILIPASKVGLVIGRGGETIKQL 290
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEA---SVVKKAL-----CQIASRLHDNPS 217
+ TG ++ +++D LP+ A D+ ++I+G+ V KK + A+++ P
Sbjct: 291 QERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQVGKKPWHDGISPERAAQVMGPPD 347
Query: 218 RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY-----KGDTAGDWSRSLY 272
R QH A+ I N ++ A +GG +G GDWS
Sbjct: 348 RCQH--AAHIINE---------------LILTAQERDGFGGLAVARGRGRGRGDWSVGAP 390
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
++ + P G VIGKGG I I Q+SGA +++ + D
Sbjct: 391 GGVQE--------ITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSD 438
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 12/149 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV--DSSSTEGDDCLITVSSKEF 338
++EF + P +G +IG+GG I++I+ ESG I++ +SS C++T + E
Sbjct: 181 TEEFKV----PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT-GTPES 235
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
E + V R R D S +L+P S++G +IG+GG I +++
Sbjct: 236 IEQAKRLLGQIVDRC--RNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQER 293
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGD 427
T + ++ LP A D+ ++I+GD
Sbjct: 294 TGVKMVMIQDGPLPTGA---DKPLRITGD 319
>gi|312079928|ref|XP_003142383.1| hypothetical protein LOAG_06799 [Loa loa]
Length = 440
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 120/272 (44%), Gaps = 55/272 (20%)
Query: 22 GP-NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG- 79
GP K+ + D D + + L P +G++IG+GGE ++ L+ ++ ++++
Sbjct: 18 GPATKKAHVSDTEDNIV------QVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSK 71
Query: 80 --ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGG 137
E PG+ ER+ V K S + KV D VI E++R D++
Sbjct: 72 NQEVYPGTNERICLVKG------------KIAS-----VLKVSD-VILEKIREKVDNNTP 113
Query: 138 HQV----------TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR 187
+ KL+VP+ G VIGK G ++ IR +TGA I++ +
Sbjct: 114 SDIFDHKGMERKNEMKLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAKVS 173
Query: 188 SDELVQISGEA-SVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPI 246
+ ++ I+ E V+ AL ++ ++ +P QH +A+ + S G P
Sbjct: 174 QERIITIAAEQDEVLMDALQRVLEKVAADP---QHAMATIPDHKDDSFG---------PA 221
Query: 247 VGIAPLMGPYGGYKGDTAG--DWSRSLYSAPR 276
G+ L G GG +G T D+S +AP+
Sbjct: 222 SGL--LHGIGGGVQGQTIQPFDFSNRSQNAPQ 251
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 87/175 (49%), Gaps = 23/175 (13%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKEFFE 340
++++ P A +G +IGKGG + ++ ESG +++ + T CL+ +
Sbjct: 36 VKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLV--------K 87
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISF---------TTRLLVPTSRIGCLIGKGGSI 391
+++ ++ + + EK++ ++ F +L+VP + G +IGK G+
Sbjct: 88 GKIASVLKVSDVILEKIREKVDNNTPSDIFDHKGMERKNEMKLVVPNTSAGMVIGKSGAR 147
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD-LAKDALIQVMTRLRAN 445
I E+R T ANI++ PK + + ++ I+ + D + DAL +V+ ++ A+
Sbjct: 148 IKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEVLMDALQRVLEKVAAD 202
>gi|356564071|ref|XP_003550280.1| PREDICTED: uncharacterized protein LOC100782717 [Glycine max]
Length = 672
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 88/161 (54%), Gaps = 18/161 (11%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV---PGSEERVVTVYSASDETNAFEDGD 106
P ++G IIG+GGE +K L++ + +KI++ + P S R V + + D A +
Sbjct: 131 PNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVELMGSPD---AIATAE 187
Query: 107 KFVSPAQDALFKVH---DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
K ++ + L + ++A + G SD + +K +P++++G VIGKGG+ ++
Sbjct: 188 KLIN---EVLAEAETGGSGIVARRVAGQAGSD---EYVSK--IPNNKVGLVIGKGGETIK 239
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
N+++ TGA+I+++ HLP ++ ++I G ++ A
Sbjct: 240 NMQASTGARIQVIP-LHLPPGDTSTERTLKIEGTPEQIESA 279
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 28/174 (16%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV------DSSSTE------GDDCLIT 332
S ++ P +G +IGKGG I ++ +SGA I+V D +S G I
Sbjct: 125 SKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVELMGSPDAIA 184
Query: 333 VSSK---EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGG 389
+ K E + + V R ++ +G + ++ +P +++G +IGKGG
Sbjct: 185 TAEKLINEVLAEAETGGSGIVAR-------RVAGQAGSDEYVSK--IPNNKVGLVIGKGG 235
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG---DLDLAKDALIQVMT 440
I M+ T A I+++P +LP + + ++I G ++ AK + QV++
Sbjct: 236 ETIKNMQASTGARIQVIPL-HLPPGDTSTERTLKIEGTPEQIESAKQMVNQVIS 288
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELV 192
G + K+ +P+ ++G +IGKGG+ ++ ++ ++GA+I++ +D + P+ A R+ EL+
Sbjct: 121 GGGASKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVELM 177
>gi|260064185|gb|ACX30053.1| MIP13670p [Drosophila melanogaster]
Length = 346
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 34/200 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKEF 338
+ ++++ P G +IGKGG I +++++GA +K+ S T CLIT S++
Sbjct: 146 YHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAI 205
Query: 339 FEDTLSATIEAVVRLQPRCSEKI---------ERDSGLISFTTRLLVPTSRIGCLIGKGG 389
+ I +R +P + KI ERD + ++LVP S G +IGKGG
Sbjct: 206 M--VVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQV-----KILVPNSTAGMIIGKGG 258
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTR-------- 441
+ I +++ + + ++I K P S + + I GD + K+A ++++
Sbjct: 259 AFIKQIKEESGSYVQISQK---PTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSG 315
Query: 442 --LRANLFDREGAVSTFVPV 459
L + D G V+ F P
Sbjct: 316 TCLNVSYADVSGPVANFNPT 335
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 93/180 (51%), Gaps = 15/180 (8%)
Query: 42 DTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSAS 96
+T Y + L P G+IIG+GGE + L+ DT +++++ ++ PG+ ERV + +
Sbjct: 143 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLI---T 199
Query: 97 DETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
T A +F+ + ++++ + + ++ D QV K+LVP+ G +IG
Sbjct: 200 GSTEAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERD--KQV--KILVPNSTAGMIIG 255
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KGG ++ I+ E+G+ ++I + P+ + + I G+ K A I S++ ++P
Sbjct: 256 KGGAFIKQIKEESGSYVQISQK---PTDVSLQERCITIIGDKENNKNACKMILSKIVEDP 312
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/214 (18%), Positives = 85/214 (39%), Gaps = 56/214 (26%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVV 201
K+LVP+ G +IGKGG+ + +++ +TGA++++ K + P R + I+G +
Sbjct: 149 KILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTER---VCLITGSTEAI 205
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
+ I ++ + P
Sbjct: 206 MVVMEFIMDKIREKP--------------------------------------------- 220
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D + + ++ ++++ P + G +IGKGGA I QI++ESG+ +++
Sbjct: 221 ----DLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQ 276
Query: 322 SSTE---GDDCLITVSSKEFFEDTLSATIEAVVR 352
T+ + C+ + KE ++ + +V
Sbjct: 277 KPTDVSLQERCITIIGDKENNKNACKMILSKIVE 310
>gi|145238284|ref|XP_001391789.1| RNA-binding protein rnc1 [Aspergillus niger CBS 513.88]
gi|134076273|emb|CAL00757.1| unnamed protein product [Aspergillus niger]
gi|350635790|gb|EHA24151.1| hypothetical protein ASPNIDRAFT_209528 [Aspergillus niger ATCC
1015]
Length = 360
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 133/292 (45%), Gaps = 40/292 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + ++ G IIG+ G+ V LR +T K + + VPG +RV+TV T
Sbjct: 46 RAIVSSKEAGIIIGKSGKNVADLRDETGVKAGVSKVVPGVHDRVLTV------TGPLNGT 99
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ + L + ++ + G ++G H V +LL+ +Q+G +IG+ G +++I
Sbjct: 100 ARAYALVAKGLLEGAPQM---GMGGIVSNNGTHPV--RLLISHNQMGTIIGRQGLKIKHI 154
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH--LL 223
+ +G ++ + + E LP R +V++ G ++KA+ +I L D+ R L
Sbjct: 155 QDASGVRM-VAQKEMLPQSTER---IVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILY 210
Query: 224 ASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY-----GGYKGDTAGDWSRSLYSAPRDD 278
A+ +S G+ + VG PY G D +G + R S P D
Sbjct: 211 NPAV---RASVGTTTSTSTMNQSVGNGYNSRPYNRTGNGADFSDQSGGYGRR--SNP--D 263
Query: 279 LSSKEFSL-----------RLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S++ + L + P +G +IG+GG+ I +IR+ SGA I +
Sbjct: 264 TSNRGYPLVTEDGEEIQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISI 315
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
DG T + +P+D +GC+IG+GG + IR +GA+I I K H + + + I
Sbjct: 275 DGEEIQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKAPHDET----GERMFTI 330
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHL 222
G A +KAL + L +R L
Sbjct: 331 MGSAQANEKALYLLYENLEAEKTRRSQL 358
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
T + +P +GC+IG+GGS ITE+RR + A I I
Sbjct: 281 TQNISIPADMVGCIIGRGGSKITEIRRSSGARISI 315
>gi|194384644|dbj|BAG59482.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 92/180 (51%), Gaps = 31/180 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|195330414|ref|XP_002031899.1| GM23807 [Drosophila sechellia]
gi|194120842|gb|EDW42885.1| GM23807 [Drosophila sechellia]
Length = 572
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 46/205 (22%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS-----STEGDDCLITVSSK-- 336
+ ++++ P G +IGKGG I +++++GA +K+ S T CLIT S++
Sbjct: 66 YHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAI 125
Query: 337 ----EFFEDTLSATIEAVVRLQPRCSEKI---------ERDSGLISFTTRLLVPTSRIGC 383
EF D +R +P + KI ERD + ++LVP S G
Sbjct: 126 MVVMEFIMDK--------IREKPDLTNKIVDVESKQTQERDRQV-----KILVPNSTAGM 172
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTR-- 441
+IGKGG+ I +++ + + ++I K PK S + + I GD + K+A ++++
Sbjct: 173 IIGKGGAFIKQIKEESGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIV 229
Query: 442 --------LRANLFDREGAVSTFVP 458
L + D G V+ F P
Sbjct: 230 EDPQSGTCLNVSYADVSGPVANFNP 254
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 92/180 (51%), Gaps = 15/180 (8%)
Query: 42 DTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSAS 96
DT Y + L P G+IIG+GGE + L+ DT +++++ ++ PG+ ERV + +
Sbjct: 63 DTTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLI---T 119
Query: 97 DETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
T A +F+ + ++++ E + ++ D QV K+LVP+ G +IG
Sbjct: 120 GSTEAIMVVMEFIMDKIREKPDLTNKIVDVESKQTQERD--RQV--KILVPNSTAGMIIG 175
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KGG ++ I+ E+G+ ++I + P + + I G+ K A I S++ ++P
Sbjct: 176 KGGAFIKQIKEESGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIVEDP 232
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/214 (18%), Positives = 84/214 (39%), Gaps = 56/214 (26%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVV 201
K+LVP+ G +IGKGG+ + +++ +TGA++++ K + P R + I+G +
Sbjct: 69 KILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTER---VCLITGSTEAI 125
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
+ I ++ + P
Sbjct: 126 MVVMEFIMDKIREKP--------------------------------------------- 140
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D + + ++ ++++ P + G +IGKGGA I QI++ESG+ +++
Sbjct: 141 ----DLTNKIVDVESKQTQERDRQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQ 196
Query: 322 SSTE---GDDCLITVSSKEFFEDTLSATIEAVVR 352
+ + C+ + KE ++ + +V
Sbjct: 197 KPKDVSLQERCITIIGDKENNKNACKMILSKIVE 230
>gi|339242773|ref|XP_003377312.1| poly(rC)-binding protein 3 [Trichinella spiralis]
gi|316973900|gb|EFV57443.1| poly(rC)-binding protein 3 [Trichinella spiralis]
Length = 410
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 259 YKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIK 318
Y +T GD S+ L S S ++RL+ +G +IGK A IN I
Sbjct: 15 YSSNTMGDTSQPLLSNSTPPNLSLVQTIRLLMQGKEVGSIIGKSMAKINISDGTCPERIV 74
Query: 319 VDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPT 378
+ S + D + K+F ED ++I T RL+VP
Sbjct: 75 TITGSVQAIDTAFKMICKKFEED----------------QQQIPDSVPKPPITFRLIVPA 118
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
++ GCLIG+GGS I ++R T A+I++ E LP + + V +SG +A+IQ
Sbjct: 119 TQCGCLIGRGGSKIKDIREATGASIQVA-SEMLP---NSTERAVTLSG----TAEAIIQC 170
Query: 439 MTRLRANLFDR--EGAVSTFVPV----FLC 462
M ++ L + +GA+ + P+ FLC
Sbjct: 171 MNQICLILLESPPKGAIVPYRPIPSIPFLC 200
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 33/168 (19%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ + +KI I + T P ER+VT+ +
Sbjct: 49 KEVGSIIGK-----------SMAKINISDGTCP---ERIVTITGSVQ------------- 81
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
A D FK+ + E+ + DS +T +L+VP+ Q GC+IG+GG +++IR TG
Sbjct: 82 -AIDTAFKMICKKFEEDQQQIPDSVPKPPITFRLIVPATQCGCLIGRGGSKIKDIREATG 140
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
A I++ E LP+ R+ V +SG A + + + QI L ++P +
Sbjct: 141 ASIQV-ASEMLPNSTERA---VTLSGTAEAIIQCMNQICLILLESPPK 184
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV 92
+R + P + G +IGRGG +K +R T + I++ E +P S ER VT+
Sbjct: 112 FRLIVPATQCGCLIGRGGSKIKDIREATGASIQVASEMLPNSTERAVTL 160
>gi|392347468|ref|XP_003749842.1| PREDICTED: poly(rC)-binding protein 1 [Rattus norvegicus]
Length = 516
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 86/170 (50%), Gaps = 28/170 (16%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 177 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 226
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 227 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 276
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI 208
G ++ IR TGAQ+++ D LP+ R+ + + + K +C +
Sbjct: 277 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGVPQSVTECVKQICLV 325
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + +C R ++ ++G +
Sbjct: 174 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG----NCPER---IITLTGPTN 226
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 227 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 253
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 254 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 293
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 174 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 221
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D + T RL+VP ++ G LIGKGG I
Sbjct: 222 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 281
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 282 EIRESTGAQVQV 293
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 125 AEELRGDEDS-DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPS 183
+ E++G S D Q T +L +P++ IGC+IG+ G + IR +GAQI+I
Sbjct: 424 SPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANP----- 478
Query: 184 CALRSDELVQISGEASVVKKALCQIASRL 212
S V I+G A+ + A I +RL
Sbjct: 479 VEGSSGRQVTITGSAASISLAQYLINARL 507
>gi|47214279|emb|CAG01336.1| unnamed protein product [Tetraodon nigroviridis]
Length = 408
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 136/323 (42%), Gaps = 56/323 (17%)
Query: 62 GEIVKQLRIDTKSKI--RIGETVPGSEERVVTVYSAS------DETNAFEDGDKFVSPAQ 113
GE VK++R D ++ + +P + R++ + S E N E P
Sbjct: 59 GETVKKMREDVGGRVSTWLSGRLPLPDARLLLSFQQSGARINISEGNCPERIVTITGPT- 117
Query: 114 DALFKVHDRVIAEELRGD-------EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIR 166
DA+FK +IA + D + VT +L+VP+ Q G +IGKGG ++ +R
Sbjct: 118 DAIFKAFA-MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMR 176
Query: 167 SETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL---- 222
TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + +
Sbjct: 177 ESTGAQVQVAGD-MLPNSTERA---VTISGTPEAIIQCVKQICVVMLESPPKGATIPYRP 232
Query: 223 --LASAISNSHSSSGSLVG------PTAATPIVGIAPLMGPY-----------GGYKGDT 263
++ + S + ++ G P + + +A P+ G Y
Sbjct: 233 KPASTPVIFSGGQAYTIQGQYAIPHPDQLSKLHQLAMQQPPFTPLGQTTPAFPGTYPPTW 292
Query: 264 AGDWSRSLYS-APRDDLSSKEFSL-----------RLVCPVANIGGVIGKGGAIINQIRQ 311
W + L S P D SS + L P IG +IG+ G IN+IRQ
Sbjct: 293 RPRWPQLLLSFVPADARSSSSVTAALDAGNQASTHELTIPNDLIGCIIGRQGTKINEIRQ 352
Query: 312 ESGAAIKVDSSSTEGDDCLITVS 334
SGA IK+ ++ + IT++
Sbjct: 353 MSGAQIKIANAMEGSSERQITIT 375
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 135 DGGHQV-TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D G+Q T +L +P+D IGC+IG+ G + IR +GAQI+I + S+ +
Sbjct: 319 DAGNQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-----AMEGSSERQIT 373
Query: 194 ISGEASVVKKALCQIASRLHD 214
I+G + + A I +R D
Sbjct: 374 ITGTPANISLAQYLINARFRD 394
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T RL+VP S+ G LIGKGGS I EMR T A +++ + LP + + V ISG
Sbjct: 151 TLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVA-GDMLP---NSTERAVTISG---- 202
Query: 431 AKDALIQVMTRL 442
+A+IQ + ++
Sbjct: 203 TPEAIIQCVKQI 214
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTV 92
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+
Sbjct: 153 RLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTI 200
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
S +LRLV P + G +IGKGG+ I ++R+ +GA ++V D L + +
Sbjct: 146 SKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV------AGDMLPNSTERAV- 198
Query: 340 EDTLSATIEAVVR 352
T+S T EA+++
Sbjct: 199 --TISGTPEAIIQ 209
>gi|413949911|gb|AFW82560.1| hypothetical protein ZEAMMB73_842471 [Zea mays]
Length = 418
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 33/224 (14%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSP 111
+K+G+IIG GE VK+L +T++ +RI + E+ V ++ E D+ + P
Sbjct: 116 KKVGAIIGHKGERVKRLCEETRACVRIIGGHLCAAEQAVIIFGR-------EQLDEPLPP 168
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A DAL +V+ + I + D + + ++L PS+Q +IG+ G ++ +I +
Sbjct: 169 AMDALLRVYQQTINND---SLDVGPDNVIVRQILAPSEQAASLIGEHGVMINSIMEASQT 225
Query: 172 QIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSH 231
IR+L +E LPS ++ L I PS + L S S
Sbjct: 226 DIRVLGNE-LPS---------------DLIDTLLKWI-------PSNDEELRLRLSSRST 262
Query: 232 SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
++ + V A+ P+ AP +G + ++ G + ++Y P
Sbjct: 263 ATPHASVAAFASAPVSHTAPWLGKFIAFEPFNVGGFDWAIYFYP 306
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 65/137 (47%), Gaps = 11/137 (8%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ 354
+G +IG G + ++ +E+ A +++ + + + +E ++ L ++A++R+
Sbjct: 118 VGAIIGHKGERVKRLCEETRACVRIIGGHLCAAEQAVIIFGREQLDEPLPPAMDALLRVY 177
Query: 355 PRCSEKIERDSGLISFTTR-LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPK 413
+ D G + R +L P+ + LIG+ G +I + ++ +IR+L E LP
Sbjct: 178 QQTINNDSLDVGPDNVIVRQILAPSEQAASLIGEHGVMINSIMEASQTDIRVLGNE-LPS 236
Query: 414 ---------IASEDDEM 421
I S D+E+
Sbjct: 237 DLIDTLLKWIPSNDEEL 253
>gi|405976740|gb|EKC41236.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Crassostrea
gigas]
Length = 416
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 164/392 (41%), Gaps = 56/392 (14%)
Query: 54 IGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQ 113
+G+IIG+ G+ + + ++++++ I S + +VT+ + + S A
Sbjct: 19 VGAIIGKQGQTIHNITSESRARVDIHRRDGLSTDTLVTIKGSPEN----------CSKAC 68
Query: 114 DALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQI 173
+ K+ + + S + K++ P+ G +IGK G ++++ +TG I
Sbjct: 69 KEIMKI--------VESEAQSLNKGEPPLKIICPNSLCGRIIGKQGNVIKSFMEQTGTHI 120
Query: 174 RILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSS 233
+ + + + D ++ I+G KA ++ ++ + N ++
Sbjct: 121 VVSSATDMNNFFV--DRVITITGSPENTSKAEALVSEKM-------RKCFEQDAQNYNTQ 171
Query: 234 SGSLVGPTAATPIVGIAPLM--GPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCP 291
G G ++ PY Y+ G + P+ DL L P
Sbjct: 172 MGMFGGMPPMPNMMPPYNFQRGPPYPPYQMQGDGFYY-GQGGPPQQDLEV----TYLYIP 226
Query: 292 VANIGGVIGKGGAIINQIRQESGAAIKVDS----SSTEGD---DCLITVSSKEFFEDTLS 344
+ +G IG G+ I +I + SGA IK+++ S GD D E + ++
Sbjct: 227 ESTVGACIGSKGSNIKEIMRLSGARIKIENPQMQSGKNGDMNGDRKGPTPPLEERKVIIT 286
Query: 345 ATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
T EA + Q +KI+ + G + + +LVP S IG +IGKGG + EM+R++
Sbjct: 287 GTAEAQWKAQFYVFDKIKTEGGFQRIEEVHLRSEVLVPRSMIGRIIGKGGQNVREMQRVS 346
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDLDLA 431
A +++ P +N Q GD+++A
Sbjct: 347 GAIVKV-PDQN---------SQTQSDGDMEVA 368
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 85/206 (41%), Gaps = 48/206 (23%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI------------------GETVP 83
+ Y Y+ P +G+ IG G +K++ + ++I+I G T P
Sbjct: 219 EVTYLYI-PESTVGACIGSKGSNIKEIMRLSGARIKIENPQMQSGKNGDMNGDRKGPTPP 277
Query: 84 GSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---- 139
E +V+ +A + A F V D++ ++GG Q
Sbjct: 278 LEERKVIITGTAEAQWKA--------------QFYVFDKI---------KTEGGFQRIEE 314
Query: 140 --VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGE 197
+ +++LVP IG +IGKGGQ V+ ++ +GA +++ + V I G
Sbjct: 315 VHLRSEVLVPRSMIGRIIGKGGQNVREMQRVSGAIVKVPDQNSQTQSDGDMEVAVSIIGH 374
Query: 198 ASVVKKALCQIASRLHDNPSRSQHLL 223
++ A+ +I S ++ P + L+
Sbjct: 375 FYAMQPAIRRIRSLVNPRPQQGPVLM 400
>gi|194881635|ref|XP_001974928.1| GG22043 [Drosophila erecta]
gi|190658115|gb|EDV55328.1| GG22043 [Drosophila erecta]
Length = 498
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 31/193 (16%)
Query: 274 APRDDLSSK--EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
P+D ++ E ++R++ P + G VIGKGG I ++R + A + VD S +G + I
Sbjct: 11 GPQDQKRNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDS--QGPERTI 68
Query: 332 TVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSI 391
+S+ + +T+E + + E+ E F RLL+ S GC+IGKGG
Sbjct: 69 QISAD------IESTLEIITEMLKYFEERDE------DFDVRLLIHQSLAGCVIGKGGQK 116
Query: 392 ITEMR-----RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
I E+R R K + P+ D +VQ G DA+ +V+T R
Sbjct: 117 IKEIRDRIGCRFLKVFSNVAPQST--------DRVVQTVGKQSQVIDAVREVITLTRDTP 168
Query: 447 FDREGAVSTFVPV 459
+GA+ + P+
Sbjct: 169 I--KGAIHNYDPM 179
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 29/176 (16%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+TV R L P G++IG+GG+ ++++R K+ + + ++ ER + + ++D +
Sbjct: 22 EETV-RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDS--QGPERTIQI--SADIES 76
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E +I E L+ E+ D V +LL+ GCVIGKGGQ
Sbjct: 77 TLE-------------------IITEMLKYFEERDEDFDV--RLLIHQSLAGCVIGKGGQ 115
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
++ IR G + + P +D +VQ G+ S V A+ ++ + D P
Sbjct: 116 KIKEIRDRIGCRFLKVFSNVAPQS---TDRVVQTVGKQSQVIDAVREVITLTRDTP 168
>gi|242022794|ref|XP_002431823.1| far upstream fuse binding protein, putative [Pediculus humanus
corporis]
gi|212517155|gb|EEB19085.1| far upstream fuse binding protein, putative [Pediculus humanus
corporis]
Length = 708
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 161/405 (39%), Gaps = 101/405 (24%)
Query: 48 LCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDK 107
+ P + +G IIGRGGE + +L+ ++ KI++ E G+ ER T+ + N
Sbjct: 50 MVPDKIVGLIIGRGGEQITRLQFESGCKIQM-ERSRGTVERQCTLTGTREAINR------ 102
Query: 108 FVSPAQDALFKVHDRVIAEE----------------------LRGDEDSDGGHQVTAKLL 145
A++ + + +I E +++S Q A+++
Sbjct: 103 ----AREMVMNIVSTLIRNENFGSGGSGNNNNNGNDSFSHPPFHQNQNSVPQGQAFAEIM 158
Query: 146 VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKAL 205
+P ++G VIGKGG+ +++++ TGA++ +++D S + ++ ++I+G V A
Sbjct: 159 IPGPKVGLVIGKGGETIKHLQDTTGARMVVVQD----SNSQDYEKPLRITGTQQQVDHAK 214
Query: 206 CQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAG 265
+ + D S A + +S+G GP
Sbjct: 215 DLVYQMIADKDVGSGDRRNRADRSHFNSAGPPSGPNN----------------------- 251
Query: 266 DWSRSLYSAPRDDLSSKEFS-LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
+S D+ S + ++ P A +G VIGKGG +I +I+ +GA ++ +
Sbjct: 252 ------FSNEFDNNSQPGGGVIEILVPRAAVGVVIGKGGEMIKKIQSSTGAKLQFEQGRD 305
Query: 325 E--GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK---------------------- 360
+ GD I E ED IE + +Q R +
Sbjct: 306 DGPGDRKCILTGKPEQCEDAREKVIELIDSVQRRDDRREPGRTGRNDRNDRDRRGQSAGD 365
Query: 361 IERDSGLIS-FTTR---------LLVPTSRIGCLIGKGGSIITEM 395
+R +G + +R VP +R G +IGKGG I ++
Sbjct: 366 FDRQAGRNERWNSRDRSERNEITFAVPANRAGFVIGKGGEKIKQI 410
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 31/199 (15%)
Query: 2 AGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRG 61
+G R + RSH + GPN D+ Q P V L P +G +IG+G
Sbjct: 228 SGDRRNRADRSHFNSAGPPSGPNNFSNEFDNNSQ----PGGGVIEILVPRAAVGVVIGKG 283
Query: 62 GEIVKQLRIDTKSKIRIGETV---PGSEERVVTVYSASDE---------TNAFEDGDKFV 109
GE++K+++ T +K++ + PG + ++T E ++ + D
Sbjct: 284 GEMIKKIQSSTGAKLQFEQGRDDGPGDRKCILTGKPEQCEDAREKVIELIDSVQRRDDRR 343
Query: 110 SPAQDALFKVHDRVIAEELRGDEDSDGG-------------HQVTAKLLVPSDQIGCVIG 156
P + +DR + GD D G +++T VP+++ G VIG
Sbjct: 344 EPGRTGRNDRNDRDRRGQSAGDFDRQAGRNERWNSRDRSERNEIT--FAVPANRAGFVIG 401
Query: 157 KGGQIVQNIRSETGAQIRI 175
KGG+ ++ I ++ GA I
Sbjct: 402 KGGEKIKQINAQCGAYCEI 420
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.135 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,225,155,644
Number of Sequences: 23463169
Number of extensions: 312503632
Number of successful extensions: 828674
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1748
Number of HSP's successfully gapped in prelim test: 1343
Number of HSP's that attempted gapping in prelim test: 799106
Number of HSP's gapped (non-prelim): 20214
length of query: 462
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 316
effective length of database: 8,933,572,693
effective search space: 2823008970988
effective search space used: 2823008970988
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 79 (35.0 bits)