Query 012478
Match_columns 462
No_of_seqs 232 out of 1628
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 10:13:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012478.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012478hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3eoo_A Methylisocitrate lyase; 100.0 4.1E-75 1.4E-79 581.0 32.0 289 73-365 6-296 (298)
2 3fa4_A 2,3-dimethylmalate lyas 100.0 1E-74 3.5E-79 578.8 34.2 289 75-364 3-293 (302)
3 3lye_A Oxaloacetate acetyl hyd 100.0 1.2E-74 4.1E-79 579.6 33.4 288 74-363 9-300 (307)
4 3ih1_A Methylisocitrate lyase; 100.0 3.3E-72 1.1E-76 561.6 32.0 284 74-364 14-299 (305)
5 1zlp_A PSR132, petal death pro 100.0 1.6E-71 5.5E-76 559.3 31.7 296 62-362 13-311 (318)
6 1xg4_A Probable methylisocitra 100.0 1.2E-70 4E-75 548.3 31.7 283 76-362 4-289 (295)
7 2hjp_A Phosphonopyruvate hydro 100.0 9.2E-70 3.2E-74 540.7 32.2 281 75-362 1-289 (290)
8 3b8i_A PA4872 oxaloacetate dec 100.0 7.7E-70 2.6E-74 540.5 31.0 277 76-364 8-285 (287)
9 3eol_A Isocitrate lyase; seatt 100.0 5.5E-71 1.9E-75 572.2 23.6 282 47-331 10-368 (433)
10 3lg3_A Isocitrate lyase; conse 100.0 1.4E-70 4.9E-75 568.4 25.8 291 37-330 1-372 (435)
11 3i4e_A Isocitrate lyase; struc 100.0 1.3E-69 4.5E-74 562.2 25.8 289 40-331 6-373 (439)
12 1s2w_A Phosphoenolpyruvate pho 100.0 2.2E-68 7.4E-73 531.9 28.5 282 75-363 5-293 (295)
13 1f8m_A Isocitrate lyase, ICL; 100.0 1.6E-68 5.5E-73 554.0 26.8 284 45-331 11-369 (429)
14 2ze3_A DFA0005; organic waste 100.0 5.2E-61 1.8E-65 474.6 27.4 260 76-350 5-274 (275)
15 2qiw_A PEP phosphonomutase; st 100.0 1E-57 3.6E-62 446.7 27.0 241 76-331 7-253 (255)
16 1dqu_A Isocitrate lyase; beta 100.0 1.6E-60 5.5E-65 504.2 7.4 278 45-331 15-353 (538)
17 3vav_A 3-methyl-2-oxobutanoate 100.0 6.1E-40 2.1E-44 323.9 15.7 233 76-336 16-271 (275)
18 1m3u_A 3-methyl-2-oxobutanoate 100.0 6.6E-37 2.2E-41 300.9 19.4 231 77-336 5-259 (264)
19 1o66_A 3-methyl-2-oxobutanoate 100.0 1.2E-35 4E-40 293.3 20.6 231 77-337 5-260 (275)
20 1oy0_A Ketopantoate hydroxymet 100.0 1.4E-34 4.8E-39 286.5 24.1 232 76-337 21-278 (281)
21 2p10_A MLL9387 protein; putati 98.4 5.6E-05 1.9E-09 75.1 22.0 226 78-330 17-280 (286)
22 1h5y_A HISF; histidine biosynt 98.0 0.0001 3.5E-09 68.5 14.9 174 101-316 38-233 (253)
23 1thf_D HISF protein; thermophI 97.9 0.00021 7.3E-09 67.4 14.2 190 102-332 36-245 (253)
24 3igs_A N-acetylmannosamine-6-p 97.7 0.0024 8E-08 61.1 19.4 187 74-315 3-215 (232)
25 2ekc_A AQ_1548, tryptophan syn 97.7 0.005 1.7E-07 59.6 21.6 210 79-329 6-257 (262)
26 3q58_A N-acetylmannosamine-6-p 97.7 0.0018 6.3E-08 61.8 17.9 185 76-315 5-215 (229)
27 1ka9_F Imidazole glycerol phos 97.7 0.0004 1.4E-08 65.5 13.0 176 101-316 36-231 (252)
28 2yxg_A DHDPS, dihydrodipicolin 97.6 0.00078 2.7E-08 66.2 14.7 122 163-302 19-150 (289)
29 2ehh_A DHDPS, dihydrodipicolin 97.6 0.00081 2.8E-08 66.2 14.8 122 163-302 19-150 (294)
30 3a5f_A Dihydrodipicolinate syn 97.6 0.00032 1.1E-08 69.0 11.6 125 159-302 17-151 (291)
31 3cpr_A Dihydrodipicolinate syn 97.6 0.00054 1.9E-08 67.9 12.9 122 163-302 35-166 (304)
32 2tps_A Protein (thiamin phosph 97.6 0.009 3.1E-07 55.2 20.4 155 101-315 36-205 (227)
33 3m5v_A DHDPS, dihydrodipicolin 97.6 0.00046 1.6E-08 68.3 12.2 123 163-302 26-158 (301)
34 3l21_A DHDPS, dihydrodipicolin 97.6 0.00062 2.1E-08 67.6 13.1 122 163-302 34-165 (304)
35 2ojp_A DHDPS, dihydrodipicolin 97.6 0.00048 1.6E-08 67.8 12.3 122 163-302 20-151 (292)
36 3flu_A DHDPS, dihydrodipicolin 97.6 0.00051 1.8E-08 67.8 12.3 122 163-302 26-157 (297)
37 1xky_A Dihydrodipicolinate syn 97.6 0.00054 1.8E-08 67.9 12.3 122 163-302 31-162 (301)
38 3qfe_A Putative dihydrodipicol 97.5 0.00074 2.5E-08 67.5 13.1 126 159-302 26-164 (318)
39 2qjg_A Putative aldolase MJ040 97.5 0.0062 2.1E-07 58.2 18.8 173 101-315 50-242 (273)
40 2wkj_A N-acetylneuraminate lya 97.5 0.00058 2E-08 67.7 11.9 123 163-302 30-162 (303)
41 1o5k_A DHDPS, dihydrodipicolin 97.5 0.00052 1.8E-08 68.1 11.5 122 163-302 31-162 (306)
42 2r8w_A AGR_C_1641P; APC7498, d 97.5 0.0007 2.4E-08 68.1 12.5 122 163-302 53-184 (332)
43 3eb2_A Putative dihydrodipicol 97.5 0.00051 1.7E-08 68.0 11.2 122 163-302 23-154 (300)
44 3b4u_A Dihydrodipicolinate syn 97.5 0.0011 3.7E-08 65.4 13.5 123 163-302 22-157 (294)
45 3daq_A DHDPS, dihydrodipicolin 97.5 0.00039 1.3E-08 68.5 10.2 123 163-302 21-152 (292)
46 3tak_A DHDPS, dihydrodipicolin 97.5 0.0007 2.4E-08 66.6 11.9 123 163-302 20-151 (291)
47 1f6k_A N-acetylneuraminate lya 97.5 0.00056 1.9E-08 67.3 11.1 122 163-302 22-154 (293)
48 3tdn_A FLR symmetric alpha-bet 97.5 0.00029 9.9E-09 66.8 8.7 174 101-315 40-234 (247)
49 3na8_A Putative dihydrodipicol 97.5 0.00054 1.8E-08 68.4 11.0 123 163-302 43-174 (315)
50 1jub_A Dihydroorotate dehydrog 97.5 0.0077 2.6E-07 58.9 19.0 207 90-315 15-276 (311)
51 3fkr_A L-2-keto-3-deoxyarabona 97.5 0.0012 4.1E-08 65.7 13.3 122 163-302 27-160 (309)
52 2v9d_A YAGE; dihydrodipicolini 97.5 0.00065 2.2E-08 68.7 11.5 122 163-302 50-181 (343)
53 2rfg_A Dihydrodipicolinate syn 97.5 0.00047 1.6E-08 68.2 10.3 122 163-302 19-150 (297)
54 3qze_A DHDPS, dihydrodipicolin 97.5 0.0007 2.4E-08 67.5 11.5 123 163-302 42-173 (314)
55 2vc6_A MOSA, dihydrodipicolina 97.4 0.0012 4.2E-08 64.9 12.9 122 163-302 19-150 (292)
56 1yxy_A Putative N-acetylmannos 97.4 0.01 3.5E-07 55.5 18.6 165 101-315 41-220 (234)
57 3d0c_A Dihydrodipicolinate syn 97.4 0.0016 5.6E-08 64.8 13.7 121 160-302 28-157 (314)
58 3si9_A DHDPS, dihydrodipicolin 97.4 0.00083 2.8E-08 67.1 11.6 104 163-281 41-152 (315)
59 2w6r_A Imidazole glycerol phos 97.4 0.0011 3.9E-08 63.0 12.0 180 101-317 35-236 (266)
60 3s5o_A 4-hydroxy-2-oxoglutarat 97.4 0.00059 2E-08 67.8 10.3 122 163-302 33-166 (307)
61 2e6f_A Dihydroorotate dehydrog 97.4 0.012 4.1E-07 57.6 19.3 204 91-315 18-278 (314)
62 1qop_A Tryptophan synthase alp 97.4 0.022 7.5E-07 55.1 20.7 196 78-317 5-241 (268)
63 2nuw_A 2-keto-3-deoxygluconate 97.4 0.00099 3.4E-08 65.5 11.3 119 163-302 18-147 (288)
64 2r91_A 2-keto-3-deoxy-(6-phosp 97.4 0.0027 9.3E-08 62.2 14.4 118 163-301 17-145 (286)
65 3e96_A Dihydrodipicolinate syn 97.4 0.0013 4.3E-08 65.6 11.9 122 159-302 27-157 (316)
66 1vzw_A Phosphoribosyl isomeras 97.3 0.0022 7.4E-08 60.4 12.7 175 101-316 37-228 (244)
67 4dpp_A DHDPS 2, dihydrodipicol 97.3 0.0033 1.1E-07 64.3 14.9 123 163-302 78-207 (360)
68 4adt_A Pyridoxine biosynthetic 97.3 0.013 4.4E-07 58.4 18.7 186 80-315 15-243 (297)
69 2y88_A Phosphoribosyl isomeras 97.3 0.0032 1.1E-07 59.0 13.5 174 101-315 36-230 (244)
70 3vnd_A TSA, tryptophan synthas 97.3 0.038 1.3E-06 54.2 21.6 199 78-317 6-242 (267)
71 1w3i_A EDA, 2-keto-3-deoxy glu 97.3 0.003 1E-07 62.2 13.7 118 163-301 18-146 (293)
72 1rd5_A Tryptophan synthase alp 97.2 0.015 5.2E-07 55.6 17.4 202 78-317 6-237 (262)
73 3dz1_A Dihydrodipicolinate syn 97.2 0.0018 6.1E-08 64.4 10.8 123 163-302 27-158 (313)
74 3h5d_A DHDPS, dihydrodipicolin 97.2 0.0015 5.3E-08 65.0 10.3 122 163-302 26-158 (311)
75 3nav_A Tryptophan synthase alp 97.2 0.052 1.8E-06 53.3 21.0 199 78-317 8-244 (271)
76 1gte_A Dihydropyrimidine dehyd 97.2 0.021 7E-07 65.0 20.6 205 96-315 554-821 (1025)
77 1xi3_A Thiamine phosphate pyro 97.1 0.052 1.8E-06 49.4 19.3 151 101-315 31-195 (215)
78 1y0e_A Putative N-acetylmannos 97.1 0.011 3.8E-07 54.6 14.6 165 101-315 28-209 (223)
79 1qo2_A Molecule: N-((5-phospho 97.0 0.0042 1.5E-07 58.4 11.5 173 101-316 35-229 (241)
80 3f4w_A Putative hexulose 6 pho 97.0 0.028 9.5E-07 51.5 16.3 143 140-316 42-193 (211)
81 1ujp_A Tryptophan synthase alp 97.0 0.051 1.8E-06 53.1 19.0 196 80-317 6-236 (271)
82 2r14_A Morphinone reductase; H 97.0 0.019 6.5E-07 58.6 16.4 140 165-315 166-333 (377)
83 1vyr_A Pentaerythritol tetrani 96.9 0.022 7.4E-07 57.8 16.4 140 165-315 161-328 (364)
84 1z41_A YQJM, probable NADH-dep 96.9 0.045 1.5E-06 54.6 18.5 196 109-315 52-312 (338)
85 1p0k_A Isopentenyl-diphosphate 96.9 0.062 2.1E-06 53.6 19.3 186 98-317 75-287 (349)
86 1zco_A 2-dehydro-3-deoxyphosph 96.9 0.015 5.2E-07 56.7 14.2 140 75-216 73-257 (262)
87 2f6u_A GGGPS, (S)-3-O-geranylg 96.9 0.0015 5.3E-08 63.0 6.8 180 102-321 26-229 (234)
88 3b0p_A TRNA-dihydrouridine syn 96.8 0.011 3.9E-07 59.4 12.9 197 95-315 13-230 (350)
89 2hmc_A AGR_L_411P, dihydrodipi 96.8 0.01 3.6E-07 60.0 12.5 119 163-302 45-174 (344)
90 2nwr_A 2-dehydro-3-deoxyphosph 96.8 0.0062 2.1E-07 59.9 10.3 140 76-218 62-257 (267)
91 2v82_A 2-dehydro-3-deoxy-6-pho 96.7 0.05 1.7E-06 50.0 15.7 155 102-316 25-182 (212)
92 2fiq_A Putative tagatose 6-pho 96.7 0.27 9.4E-06 51.2 22.6 228 85-326 8-297 (420)
93 1viz_A PCRB protein homolog; s 96.7 0.0095 3.3E-07 57.7 10.8 187 102-330 26-229 (240)
94 1mdl_A Mandelate racemase; iso 96.7 0.051 1.7E-06 54.2 16.4 136 150-315 133-275 (359)
95 2z6i_A Trans-2-enoyl-ACP reduc 96.6 0.096 3.3E-06 52.0 18.2 182 80-316 4-197 (332)
96 2yzr_A Pyridoxal biosynthesis 96.6 0.067 2.3E-06 54.2 16.9 89 80-183 11-101 (330)
97 1f76_A Dihydroorotate dehydrog 96.6 0.17 5.9E-06 49.9 19.6 200 101-315 70-323 (336)
98 3sz8_A 2-dehydro-3-deoxyphosph 96.6 0.021 7E-07 56.8 12.7 141 76-218 78-276 (285)
99 2gou_A Oxidoreductase, FMN-bin 96.6 0.049 1.7E-06 55.3 15.6 140 165-315 161-327 (365)
100 2nv1_A Pyridoxal biosynthesis 96.5 0.12 4.1E-06 50.7 18.0 178 91-315 24-243 (305)
101 1ps9_A 2,4-dienoyl-COA reducta 96.5 0.069 2.4E-06 57.5 17.5 198 108-315 49-315 (671)
102 2zad_A Muconate cycloisomerase 96.5 0.026 8.8E-07 56.1 13.0 124 160-311 136-266 (345)
103 2p8b_A Mandelate racemase/muco 96.5 0.053 1.8E-06 54.2 15.3 127 160-315 138-272 (369)
104 1gvf_A Tagatose-bisphosphate a 96.5 0.55 1.9E-05 46.5 22.2 209 78-326 7-248 (286)
105 2rdx_A Mandelate racemase/muco 96.5 0.038 1.3E-06 55.7 14.1 124 160-313 142-270 (379)
106 3hgj_A Chromate reductase; TIM 96.5 0.036 1.2E-06 55.7 13.8 138 168-315 155-323 (349)
107 4ef8_A Dihydroorotate dehydrog 96.4 0.097 3.3E-06 53.2 16.9 165 133-316 109-312 (354)
108 3ru6_A Orotidine 5'-phosphate 96.4 0.071 2.4E-06 53.3 15.4 197 91-329 28-251 (303)
109 1tkk_A Similar to chloromucona 96.4 0.054 1.8E-06 54.2 14.5 129 160-314 137-272 (366)
110 1to3_A Putative aldolase YIHT; 96.3 0.1 3.6E-06 51.8 16.0 134 169-316 112-260 (304)
111 1vr6_A Phospho-2-dehydro-3-deo 96.3 0.023 8E-07 57.8 11.4 145 76-222 157-346 (350)
112 1wv2_A Thiazole moeity, thiazo 96.2 0.084 2.9E-06 52.0 14.4 173 19-219 64-240 (265)
113 1z41_A YQJM, probable NADH-dep 96.2 0.07 2.4E-06 53.3 14.2 159 100-276 148-325 (338)
114 3o63_A Probable thiamine-phosp 96.2 0.22 7.6E-06 47.9 17.1 134 133-315 76-224 (243)
115 3tsm_A IGPS, indole-3-glycerol 96.2 0.15 5.2E-06 50.1 16.2 171 96-317 78-256 (272)
116 3m47_A Orotidine 5'-phosphate 96.2 0.13 4.4E-06 48.9 15.1 188 90-316 15-208 (228)
117 2oz8_A MLL7089 protein; struct 96.1 0.12 3.9E-06 52.5 15.5 131 151-310 133-273 (389)
118 2ovl_A Putative racemase; stru 96.1 0.13 4.3E-06 51.7 15.5 133 151-313 134-275 (371)
119 3q94_A Fructose-bisphosphate a 96.1 1 3.5E-05 44.6 21.8 209 78-326 10-252 (288)
120 1icp_A OPR1, 12-oxophytodienoa 96.1 0.082 2.8E-06 53.9 14.2 140 165-315 167-335 (376)
121 2ps2_A Putative mandelate race 96.0 0.086 2.9E-06 52.8 14.1 132 151-314 136-273 (371)
122 3tfx_A Orotidine 5'-phosphate 96.0 0.14 4.7E-06 50.1 15.0 199 89-329 6-237 (259)
123 1geq_A Tryptophan synthase alp 96.0 0.085 2.9E-06 49.5 13.1 148 133-316 63-226 (248)
124 3nvt_A 3-deoxy-D-arabino-heptu 96.0 0.04 1.4E-06 56.7 11.7 140 76-217 193-377 (385)
125 2pcq_A Putative dihydrodipicol 96.0 0.0054 1.8E-07 60.1 5.0 118 163-302 17-142 (283)
126 3zwt_A Dihydroorotate dehydrog 96.0 0.32 1.1E-05 49.6 18.1 167 134-315 124-332 (367)
127 3sr7_A Isopentenyl-diphosphate 96.0 0.045 1.5E-06 55.9 11.8 86 94-186 151-238 (365)
128 3r0u_A Enzyme of enolase super 96.0 0.3 1E-05 49.6 17.8 128 159-313 138-272 (379)
129 2zbt_A Pyridoxal biosynthesis 96.0 0.41 1.4E-05 46.4 18.1 77 95-182 27-104 (297)
130 2qde_A Mandelate racemase/muco 96.0 0.052 1.8E-06 55.1 12.1 125 160-313 142-273 (397)
131 1jvn_A Glutamine, bifunctional 96.0 0.057 2E-06 57.7 13.0 192 101-315 285-531 (555)
132 1rvk_A Isomerase/lactonizing e 95.9 0.44 1.5E-05 47.8 18.8 131 162-314 148-286 (382)
133 1ep3_A Dihydroorotate dehydrog 95.9 0.15 5E-06 49.3 14.6 161 134-315 80-275 (311)
134 3bo9_A Putative nitroalkan dio 95.9 0.35 1.2E-05 48.0 17.5 200 75-329 13-228 (326)
135 3bjs_A Mandelate racemase/muco 95.9 0.069 2.3E-06 55.1 12.6 134 150-311 171-312 (428)
136 3gr7_A NADPH dehydrogenase; fl 95.8 0.12 4E-06 52.0 13.6 138 167-315 146-312 (340)
137 1o66_A 3-methyl-2-oxobutanoate 95.8 0.067 2.3E-06 52.9 11.6 136 169-312 28-183 (275)
138 3o07_A Pyridoxine biosynthesis 95.7 0.42 1.4E-05 47.6 17.1 80 92-182 14-94 (291)
139 3txv_A Probable tagatose 6-pho 95.7 0.68 2.3E-05 48.6 19.4 263 90-366 22-343 (450)
140 3iwp_A Copper homeostasis prot 95.7 1.9 6.5E-05 42.8 21.8 183 90-309 40-237 (287)
141 1m3u_A 3-methyl-2-oxobutanoate 95.6 0.083 2.8E-06 52.0 11.6 106 169-281 28-134 (264)
142 4e5t_A Mandelate racemase / mu 95.6 0.17 5.7E-06 51.8 14.4 116 159-282 147-264 (404)
143 3ozy_A Putative mandelate race 95.6 0.14 4.9E-06 52.0 13.7 132 151-312 139-279 (389)
144 1jub_A Dihydroorotate dehydrog 95.6 0.043 1.5E-06 53.6 9.4 83 100-187 110-194 (311)
145 3qja_A IGPS, indole-3-glycerol 95.6 0.11 3.9E-06 50.7 12.4 180 97-330 72-260 (272)
146 1vs1_A 3-deoxy-7-phosphoheptul 95.6 0.054 1.9E-06 53.3 10.2 139 76-216 89-272 (276)
147 3l5l_A Xenobiotic reductase A; 95.6 0.089 3.1E-06 53.2 12.0 139 168-315 161-330 (363)
148 2pp0_A L-talarate/galactarate 95.6 0.29 1E-05 49.7 15.8 123 163-313 175-304 (398)
149 2og9_A Mandelate racemase/muco 95.6 0.34 1.2E-05 49.1 16.2 123 163-313 162-291 (393)
150 3vav_A 3-methyl-2-oxobutanoate 95.6 0.093 3.2E-06 51.9 11.6 106 170-282 41-147 (275)
151 1nu5_A Chloromuconate cycloiso 95.5 0.11 3.9E-06 51.9 12.5 127 160-314 139-273 (370)
152 3khj_A Inosine-5-monophosphate 95.5 0.17 5.8E-06 51.4 13.6 146 132-315 77-241 (361)
153 3pm6_A Putative fructose-bisph 95.5 1.6 5.4E-05 43.8 20.2 214 75-325 13-266 (306)
154 3fs2_A 2-dehydro-3-deoxyphosph 95.4 0.035 1.2E-06 55.5 8.0 140 76-217 99-294 (298)
155 2qkf_A 3-deoxy-D-manno-octulos 95.3 0.053 1.8E-06 53.4 9.1 139 77-217 74-270 (280)
156 3gr7_A NADPH dehydrogenase; fl 95.3 0.25 8.6E-06 49.6 14.1 158 100-276 148-325 (340)
157 1o60_A 2-dehydro-3-deoxyphosph 95.3 0.04 1.4E-06 54.7 8.2 141 76-218 76-274 (292)
158 2hxt_A L-fuconate dehydratase; 95.2 0.35 1.2E-05 49.8 15.3 136 150-313 184-327 (441)
159 1y0e_A Putative N-acetylmannos 95.2 0.2 6.9E-06 46.0 12.1 86 88-184 118-203 (223)
160 2nli_A Lactate oxidase; flavoe 95.2 0.67 2.3E-05 47.0 17.0 105 244-362 241-359 (368)
161 1xm3_A Thiazole biosynthesis p 95.2 0.23 7.7E-06 48.0 12.9 184 91-315 16-212 (264)
162 2pgw_A Muconate cycloisomerase 95.2 0.67 2.3E-05 46.6 16.8 127 162-318 146-279 (384)
163 3stp_A Galactonate dehydratase 95.1 0.73 2.5E-05 47.4 17.1 146 150-320 167-321 (412)
164 2qgy_A Enolase from the enviro 95.1 0.3 1E-05 49.4 14.1 123 162-312 148-277 (391)
165 1ypf_A GMP reductase; GUAC, pu 95.1 0.68 2.3E-05 46.1 16.3 132 149-314 93-243 (336)
166 3gd6_A Muconate cycloisomerase 95.0 0.13 4.4E-06 52.3 11.2 126 162-315 141-273 (391)
167 3sjn_A Mandelate racemase/muco 95.0 0.13 4.4E-06 52.0 11.0 99 165-282 148-250 (374)
168 3i65_A Dihydroorotate dehydrog 95.0 0.71 2.4E-05 48.0 16.6 168 134-316 158-380 (415)
169 2e6f_A Dihydroorotate dehydrog 94.9 0.065 2.2E-06 52.4 8.4 82 101-187 111-197 (314)
170 1ydn_A Hydroxymethylglutaryl-C 94.9 0.12 4.1E-06 50.4 10.3 154 102-274 32-192 (295)
171 3vkj_A Isopentenyl-diphosphate 94.9 0.72 2.5E-05 47.0 16.2 81 97-186 135-219 (368)
172 1h7n_A 5-aminolaevulinic acid 94.9 0.8 2.7E-05 46.4 16.1 158 106-285 79-289 (342)
173 1f76_A Dihydroorotate dehydrog 94.9 0.27 9.3E-06 48.5 12.7 126 135-273 187-334 (336)
174 4fo4_A Inosine 5'-monophosphat 94.8 0.55 1.9E-05 47.9 15.1 148 133-314 79-244 (366)
175 4dwd_A Mandelate racemase/muco 94.8 1.1 3.8E-05 45.6 17.4 141 151-313 126-274 (393)
176 3tml_A 2-dehydro-3-deoxyphosph 94.8 0.059 2E-06 53.5 7.7 141 76-218 75-277 (288)
177 2czd_A Orotidine 5'-phosphate 94.8 0.62 2.1E-05 42.9 14.2 142 145-316 46-191 (208)
178 3eez_A Putative mandelate race 94.8 0.14 4.8E-06 51.8 10.6 126 160-315 142-272 (378)
179 1wv2_A Thiazole moeity, thiazo 94.8 0.98 3.3E-05 44.4 16.0 129 160-315 82-221 (265)
180 3igs_A N-acetylmannosamine-6-p 94.8 0.2 6.9E-06 47.6 11.1 105 80-215 120-227 (232)
181 4e4u_A Mandalate racemase/muco 94.7 0.48 1.6E-05 48.6 14.6 112 161-282 142-257 (412)
182 3r2g_A Inosine 5'-monophosphat 94.6 0.41 1.4E-05 48.9 13.6 167 95-315 52-233 (361)
183 2qdd_A Mandelate racemase/muco 94.6 0.22 7.5E-06 50.1 11.5 133 151-315 135-272 (378)
184 3l5a_A NADH/flavin oxidoreduct 94.6 0.38 1.3E-05 49.8 13.5 154 168-332 173-363 (419)
185 2h6r_A Triosephosphate isomera 94.6 0.4 1.4E-05 45.0 12.6 140 143-316 46-205 (219)
186 3hgj_A Chromate reductase; TIM 94.6 0.91 3.1E-05 45.5 15.9 158 100-276 156-336 (349)
187 3sgz_A Hydroxyacid oxidase 2; 94.6 0.73 2.5E-05 46.9 15.3 100 244-357 229-342 (352)
188 2nql_A AGR_PAT_674P, isomerase 94.5 0.2 6.9E-06 50.6 11.1 132 151-313 153-292 (388)
189 2gjl_A Hypothetical protein PA 94.5 0.83 2.9E-05 44.9 15.3 183 80-316 7-207 (328)
190 3ffs_A Inosine-5-monophosphate 94.5 0.32 1.1E-05 50.3 12.5 98 78-184 173-274 (400)
191 3kru_A NADH:flavin oxidoreduct 94.4 1.2 4.1E-05 44.9 16.3 151 100-272 147-321 (343)
192 2htm_A Thiazole biosynthesis p 94.4 0.16 5.5E-06 50.0 9.6 114 79-219 115-231 (268)
193 2gdq_A YITF; mandelate racemas 94.4 0.2 7E-06 50.5 10.7 132 151-312 124-268 (382)
194 1tzz_A Hypothetical protein L1 94.3 0.34 1.2E-05 48.9 12.3 122 163-312 165-297 (392)
195 4ab4_A Xenobiotic reductase B; 94.3 0.25 8.6E-06 50.2 11.1 149 168-332 156-325 (362)
196 3b0p_A TRNA-dihydrouridine syn 94.3 0.26 8.9E-06 49.5 11.1 88 101-188 75-167 (350)
197 3toy_A Mandelate racemase/muco 94.2 0.71 2.4E-05 46.8 14.3 132 151-312 157-296 (383)
198 3qw3_A Orotidine-5-phosphate d 94.2 2.4 8.1E-05 41.1 17.3 138 149-315 75-233 (255)
199 3aty_A Tcoye, prostaglandin F2 94.2 0.5 1.7E-05 48.2 13.1 137 167-315 176-341 (379)
200 2ftp_A Hydroxymethylglutaryl-C 94.1 0.91 3.1E-05 44.5 14.5 188 102-312 36-237 (302)
201 1twd_A Copper homeostasis prot 94.1 4.7 0.00016 39.4 21.8 177 94-308 6-196 (256)
202 3rcy_A Mandelate racemase/muco 94.1 1.1 3.8E-05 46.3 15.7 137 161-314 144-288 (433)
203 3q58_A N-acetylmannosamine-6-p 94.1 0.22 7.7E-06 47.3 9.7 87 80-184 120-209 (229)
204 1yad_A Regulatory protein TENI 94.1 3.5 0.00012 37.8 19.3 132 133-315 53-197 (221)
205 3jva_A Dipeptide epimerase; en 94.1 2.1 7.1E-05 42.7 17.2 130 160-318 136-272 (354)
206 1dqu_A Isocitrate lyase; beta 94.1 0.2 6.7E-06 53.8 10.1 87 237-330 373-477 (538)
207 3kru_A NADH:flavin oxidoreduct 94.1 0.55 1.9E-05 47.3 13.0 137 168-315 146-312 (343)
208 2hsa_B 12-oxophytodienoate red 94.0 1.1 3.6E-05 46.2 15.3 140 165-315 171-353 (402)
209 3iwp_A Copper homeostasis prot 94.0 0.17 5.7E-06 50.4 8.9 129 170-312 51-188 (287)
210 4fo4_A Inosine 5'-monophosphat 94.0 0.2 6.8E-06 51.1 9.8 99 80-185 139-240 (366)
211 1rvg_A Fructose-1,6-bisphospha 94.0 5.6 0.00019 39.7 23.8 210 79-326 7-269 (305)
212 2qq6_A Mandelate racemase/muco 93.9 0.46 1.6E-05 48.3 12.3 133 163-313 149-294 (410)
213 1tv5_A Dhodehase, dihydroorota 93.9 4.2 0.00015 42.4 19.7 198 105-315 111-407 (443)
214 2nzl_A Hydroxyacid oxidase 1; 93.9 2.3 7.8E-05 43.5 17.5 83 243-329 263-359 (392)
215 2poz_A Putative dehydratase; o 93.8 0.5 1.7E-05 47.7 12.3 127 163-311 137-281 (392)
216 1gox_A (S)-2-hydroxy-acid oxid 93.8 3 0.0001 42.1 18.0 102 244-359 237-352 (370)
217 3khj_A Inosine-5-monophosphate 93.8 0.25 8.4E-06 50.2 10.0 98 80-184 136-235 (361)
218 4ef8_A Dihydroorotate dehydrog 93.8 0.31 1.1E-05 49.5 10.6 142 101-260 144-306 (354)
219 1pv8_A Delta-aminolevulinic ac 93.8 0.93 3.2E-05 45.8 13.8 157 106-285 69-278 (330)
220 2cw6_A Hydroxymethylglutaryl-C 93.8 3.4 0.00012 40.2 17.8 140 98-259 82-231 (298)
221 3gka_A N-ethylmaleimide reduct 93.8 0.28 9.7E-06 49.8 10.4 138 167-315 163-321 (361)
222 1vhn_A Putative flavin oxidore 93.7 0.18 6.1E-06 49.7 8.6 149 101-274 76-229 (318)
223 3rr1_A GALD, putative D-galact 93.7 2 6.7E-05 44.0 16.5 141 150-312 114-261 (405)
224 1mzh_A Deoxyribose-phosphate a 93.6 0.75 2.6E-05 43.3 12.4 138 155-309 60-203 (225)
225 2ze3_A DFA0005; organic waste 93.6 0.3 1E-05 48.0 9.9 85 171-262 29-114 (275)
226 3ik4_A Mandelate racemase/muco 93.6 0.8 2.7E-05 46.1 13.2 127 160-313 140-273 (365)
227 2nli_A Lactate oxidase; flavoe 93.6 0.21 7.2E-06 50.7 8.9 82 88-184 229-312 (368)
228 1wa3_A 2-keto-3-deoxy-6-phosph 93.5 1.2 4.2E-05 40.3 13.2 63 248-315 119-183 (205)
229 1w8s_A FBP aldolase, fructose- 93.5 4.9 0.00017 38.7 18.1 132 169-316 96-237 (263)
230 1jcn_A Inosine monophosphate d 93.5 0.42 1.4E-05 50.2 11.3 99 81-186 287-388 (514)
231 3vzx_A Heptaprenylglyceryl pho 93.5 1.1 3.9E-05 42.9 13.4 184 105-329 27-226 (228)
232 2o56_A Putative mandelate race 93.5 1.1 3.7E-05 45.4 14.1 134 163-312 152-298 (407)
233 3mqt_A Mandelate racemase/muco 93.4 0.94 3.2E-05 46.0 13.6 99 166-282 155-257 (394)
234 2gl5_A Putative dehydratase pr 93.4 0.87 3E-05 46.1 13.3 136 163-312 150-301 (410)
235 1oy0_A Ketopantoate hydroxymet 93.4 0.37 1.3E-05 47.8 10.1 106 169-281 45-153 (281)
236 3ajx_A 3-hexulose-6-phosphate 93.4 1.1 3.6E-05 40.7 12.5 139 141-316 43-192 (207)
237 1eep_A Inosine 5'-monophosphat 93.4 0.25 8.5E-06 50.3 9.2 85 88-184 194-284 (404)
238 4e8g_A Enolase, mandelate race 93.3 2.3 7.7E-05 43.3 16.2 126 160-314 161-292 (391)
239 3l5l_A Xenobiotic reductase A; 93.3 1.2 4.1E-05 44.9 14.1 159 100-276 162-343 (363)
240 3sgz_A Hydroxyacid oxidase 2; 93.3 0.25 8.7E-06 50.3 9.1 82 88-184 217-300 (352)
241 1vrd_A Inosine-5'-monophosphat 93.3 0.26 8.8E-06 51.3 9.4 90 88-184 278-368 (494)
242 2ox4_A Putative mandelate race 93.3 0.89 3E-05 45.9 13.1 140 163-318 146-298 (403)
243 3ffs_A Inosine-5-monophosphate 93.3 1.2 4E-05 46.1 14.1 134 93-261 140-276 (400)
244 2hzg_A Mandelate racemase/muco 93.2 0.58 2E-05 47.4 11.6 137 150-314 133-281 (401)
245 1jcn_A Inosine monophosphate d 93.2 1.1 3.6E-05 47.1 13.9 64 100-184 258-323 (514)
246 1ypf_A GMP reductase; GUAC, pu 93.2 0.23 8E-06 49.5 8.5 93 80-185 139-239 (336)
247 3oa3_A Aldolase; structural ge 93.0 1.2 4.2E-05 44.2 13.1 139 153-309 114-262 (288)
248 1vhn_A Putative flavin oxidore 92.9 0.24 8.1E-06 48.9 7.9 192 95-315 14-218 (318)
249 3tj4_A Mandelate racemase; eno 92.9 4.3 0.00015 40.7 17.3 122 163-312 151-280 (372)
250 3iv3_A Tagatose 1,6-diphosphat 92.9 1.7 5.7E-05 44.0 14.2 150 95-259 109-279 (332)
251 4avf_A Inosine-5'-monophosphat 92.8 0.4 1.4E-05 50.4 10.0 120 166-314 229-365 (490)
252 1vc4_A Indole-3-glycerol phosp 92.8 1.5 5.1E-05 42.2 13.3 167 97-316 65-242 (254)
253 2c6q_A GMP reductase 2; TIM ba 92.8 0.3 1E-05 49.3 8.7 98 80-184 151-251 (351)
254 3ble_A Citramalate synthase fr 92.8 0.8 2.7E-05 45.8 11.8 166 80-273 26-205 (337)
255 2nx9_A Oxaloacetate decarboxyl 92.8 3.8 0.00013 43.0 17.3 151 101-274 35-195 (464)
256 2ftp_A Hydroxymethylglutaryl-C 92.8 5.7 0.0002 38.8 17.6 136 98-258 85-233 (302)
257 2cw6_A Hydroxymethylglutaryl-C 92.8 0.35 1.2E-05 47.3 8.9 153 102-274 33-193 (298)
258 3ugv_A Enolase; enzyme functio 92.8 4 0.00014 41.4 17.0 126 162-315 170-305 (390)
259 4fxs_A Inosine-5'-monophosphat 92.7 0.25 8.7E-06 52.0 8.3 120 166-314 231-367 (496)
260 4dbe_A Orotidine 5'-phosphate 92.7 1.8 6.1E-05 41.0 13.4 140 149-316 51-193 (222)
261 3n9r_A Fructose-bisphosphate a 92.7 9 0.00031 38.3 22.3 212 79-327 7-272 (307)
262 3r12_A Deoxyribose-phosphate a 92.6 2.6 8.7E-05 41.3 14.7 140 152-308 98-243 (260)
263 3fv9_G Mandelate racemase/muco 92.6 1.7 5.8E-05 44.0 14.0 139 150-314 134-277 (386)
264 3go2_A Putative L-alanine-DL-g 92.6 2.2 7.5E-05 43.5 14.9 138 161-312 141-294 (409)
265 3i4k_A Muconate lactonizing en 92.6 1.3 4.5E-05 44.7 13.1 126 160-313 145-278 (383)
266 3t6c_A RSPA, putative MAND fam 92.5 3.2 0.00011 42.9 16.3 145 151-313 145-324 (440)
267 3zwt_A Dihydroorotate dehydrog 92.5 0.68 2.3E-05 47.1 10.9 99 149-260 219-327 (367)
268 3bw2_A 2-nitropropane dioxygen 92.5 1.3 4.5E-05 44.3 13.0 110 168-315 112-242 (369)
269 2bdq_A Copper homeostasis prot 92.5 4 0.00014 39.1 15.6 181 94-308 6-205 (224)
270 3mkc_A Racemase; metabolic pro 92.4 1.7 5.7E-05 44.2 13.7 123 166-313 160-290 (394)
271 3oix_A Putative dihydroorotate 92.3 5.6 0.00019 40.1 17.2 162 133-315 110-309 (345)
272 3ddm_A Putative mandelate race 92.3 1.1 3.8E-05 45.5 12.2 128 151-311 147-282 (392)
273 1rqb_A Transcarboxylase 5S sub 92.3 5.1 0.00017 42.9 17.7 203 100-329 51-273 (539)
274 3rmj_A 2-isopropylmalate synth 92.2 1.7 5.8E-05 44.2 13.4 150 102-273 40-193 (370)
275 3q45_A Mandelate racemase/muco 92.2 1 3.6E-05 45.2 11.7 124 160-312 137-267 (368)
276 2ztj_A Homocitrate synthase; ( 92.2 4.8 0.00016 40.9 16.8 146 102-274 31-181 (382)
277 3ro6_B Putative chloromuconate 92.2 0.65 2.2E-05 46.4 10.2 126 160-314 137-270 (356)
278 4h2h_A Mandelate racemase/muco 92.2 1.4 4.8E-05 44.3 12.7 101 160-281 147-248 (376)
279 3tr2_A Orotidine 5'-phosphate 92.2 4.6 0.00016 38.6 15.7 185 90-316 11-222 (239)
280 1ydo_A HMG-COA lyase; TIM-barr 92.2 6.6 0.00023 38.7 17.3 138 98-257 83-230 (307)
281 1ub3_A Aldolase protein; schif 92.1 1.2 4.1E-05 42.3 11.4 138 153-307 59-202 (220)
282 1lt8_A Betaine-homocysteine me 92.1 2.9 9.8E-05 43.2 15.1 145 163-311 52-217 (406)
283 3vc5_A Mandelate racemase/muco 92.1 1.6 5.5E-05 45.3 13.3 99 162-283 187-287 (441)
284 2htm_A Thiazole biosynthesis p 92.0 3.5 0.00012 40.6 14.8 196 90-326 15-228 (268)
285 4djd_D C/Fe-SP, corrinoid/iron 92.0 1 3.5E-05 45.4 11.3 66 106-180 91-156 (323)
286 1vrd_A Inosine-5'-monophosphat 92.0 1.1 3.7E-05 46.6 12.0 125 100-260 240-369 (494)
287 1h1y_A D-ribulose-5-phosphate 91.9 2 6.9E-05 40.0 12.7 169 103-316 26-207 (228)
288 1vhc_A Putative KHG/KDPG aldol 91.9 1.1 3.8E-05 42.5 10.9 173 81-315 10-190 (224)
289 4avf_A Inosine-5'-monophosphat 91.9 0.64 2.2E-05 48.9 10.1 88 90-184 272-360 (490)
290 1xm3_A Thiazole biosynthesis p 91.9 0.68 2.3E-05 44.6 9.6 92 78-185 116-207 (264)
291 1rd5_A Tryptophan synthase alp 91.9 1.4 4.9E-05 41.8 11.7 96 151-263 21-128 (262)
292 3nl6_A Thiamine biosynthetic b 91.8 6.2 0.00021 42.1 17.7 140 127-315 46-214 (540)
293 1ydo_A HMG-COA lyase; TIM-barr 91.8 1.1 3.9E-05 44.2 11.3 174 80-274 13-194 (307)
294 1nvm_A HOA, 4-hydroxy-2-oxoval 91.8 2.1 7.1E-05 42.8 13.3 143 102-273 36-185 (345)
295 3ldv_A Orotidine 5'-phosphate 91.8 3 0.0001 40.5 14.0 188 88-316 28-240 (255)
296 2yw3_A 4-hydroxy-2-oxoglutarat 91.7 2 6.8E-05 39.9 12.3 108 169-315 74-184 (207)
297 1ps9_A 2,4-dienoyl-COA reducta 91.7 1.8 6.1E-05 46.5 13.6 156 100-274 145-326 (671)
298 1eix_A Orotidine 5'-monophosph 91.7 7.5 0.00026 36.8 16.6 146 143-316 59-227 (245)
299 3tqv_A Nicotinate-nucleotide p 91.7 0.75 2.6E-05 45.6 9.8 77 222-312 196-272 (287)
300 1n7k_A Deoxyribose-phosphate a 91.7 5.2 0.00018 38.4 15.4 134 154-307 77-218 (234)
301 3glc_A Aldolase LSRF; TIM barr 91.6 7.6 0.00026 38.4 17.0 145 150-315 105-262 (295)
302 2agk_A 1-(5-phosphoribosyl)-5- 91.6 0.13 4.4E-06 49.8 4.2 172 101-313 43-239 (260)
303 3qw4_B UMP synthase; N-termina 91.6 3 0.0001 43.5 14.8 151 150-328 77-252 (453)
304 2nzl_A Hydroxyacid oxidase 1; 91.6 0.72 2.5E-05 47.3 9.9 90 80-184 243-335 (392)
305 3ceu_A Thiamine phosphate pyro 91.6 3.9 0.00013 37.6 14.1 144 103-314 20-176 (210)
306 3s5s_A Mandelate racemase/muco 91.5 4.6 0.00016 40.9 15.7 127 160-313 141-274 (389)
307 3gka_A N-ethylmaleimide reduct 91.5 3 0.0001 42.3 14.3 146 100-276 165-334 (361)
308 3ngj_A Deoxyribose-phosphate a 91.5 3.1 0.00011 40.2 13.7 142 152-309 82-228 (239)
309 1eep_A Inosine 5'-monophosphat 91.5 3.2 0.00011 42.1 14.5 119 167-314 154-289 (404)
310 1kbi_A Cytochrome B2, L-LCR; f 91.4 0.48 1.6E-05 50.3 8.6 85 88-184 343-431 (511)
311 3dg3_A Muconate cycloisomerase 91.4 1.2 4.1E-05 44.7 11.1 126 160-313 136-269 (367)
312 3vdg_A Probable glucarate dehy 91.4 1.9 6.5E-05 44.9 13.0 121 162-309 192-315 (445)
313 3usb_A Inosine-5'-monophosphat 91.3 0.56 1.9E-05 49.6 8.9 85 90-184 299-387 (511)
314 1o5k_A DHDPS, dihydrodipicolin 91.3 3.4 0.00012 40.6 14.1 170 63-274 50-235 (306)
315 1dbt_A Orotidine 5'-phosphate 91.2 6.8 0.00023 36.9 15.6 140 150-316 54-220 (239)
316 3my9_A Muconate cycloisomerase 91.2 2.8 9.4E-05 42.2 13.6 126 160-313 143-275 (377)
317 1o94_A Tmadh, trimethylamine d 91.2 3.7 0.00013 44.8 15.5 139 166-315 150-326 (729)
318 1vyr_A Pentaerythritol tetrani 91.1 3.4 0.00012 41.6 14.3 152 100-275 165-340 (364)
319 4ab4_A Xenobiotic reductase B; 91.1 3 0.0001 42.2 13.8 147 100-276 157-326 (362)
320 2gjl_A Hypothetical protein PA 91.1 1.4 4.7E-05 43.4 11.0 94 78-185 108-201 (328)
321 3ndo_A Deoxyribose-phosphate a 91.1 5.2 0.00018 38.4 14.7 170 107-308 40-217 (231)
322 4fxs_A Inosine-5'-monophosphat 91.0 0.7 2.4E-05 48.7 9.3 89 89-184 273-362 (496)
323 1gte_A Dihydropyrimidine dehyd 91.0 1.4 4.7E-05 50.2 12.3 78 101-184 653-734 (1025)
324 1l6s_A Porphobilinogen synthas 91.0 4.9 0.00017 40.5 14.7 168 92-285 48-271 (323)
325 3bw2_A 2-nitropropane dioxygen 90.9 0.97 3.3E-05 45.3 10.0 97 78-185 135-237 (369)
326 1to3_A Putative aldolase YIHT; 90.9 1.3 4.6E-05 43.7 10.8 133 99-259 111-253 (304)
327 1twd_A Copper homeostasis prot 90.9 0.77 2.6E-05 44.9 8.8 127 171-311 14-149 (256)
328 3jr2_A Hexulose-6-phosphate sy 90.9 5.6 0.00019 36.7 14.4 143 140-317 48-201 (218)
329 4a35_A Mitochondrial enolase s 90.8 4 0.00014 42.3 14.7 133 150-312 187-331 (441)
330 3r4e_A Mandelate racemase/muco 90.8 5 0.00017 41.0 15.3 152 150-313 132-304 (418)
331 1mzh_A Deoxyribose-phosphate a 90.8 4 0.00014 38.3 13.5 127 100-259 74-203 (225)
332 3va8_A Probable dehydratase; e 90.7 0.9 3.1E-05 47.3 9.8 121 162-309 190-313 (445)
333 3l0g_A Nicotinate-nucleotide p 90.7 0.99 3.4E-05 45.1 9.6 87 211-311 194-280 (300)
334 1ydn_A Hydroxymethylglutaryl-C 90.7 6.9 0.00024 37.8 15.5 159 78-259 61-230 (295)
335 3k30_A Histamine dehydrogenase 90.7 4 0.00014 44.0 15.1 140 165-315 156-329 (690)
336 1yad_A Regulatory protein TENI 90.6 0.49 1.7E-05 43.6 6.9 94 77-187 100-194 (221)
337 4af0_A Inosine-5'-monophosphat 90.6 0.82 2.8E-05 49.2 9.4 89 90-185 324-413 (556)
338 2vc6_A MOSA, dihydrodipicolina 90.6 5.6 0.00019 38.7 14.8 167 63-274 38-220 (292)
339 4h1z_A Enolase Q92ZS5; dehydra 90.6 1.8 6.1E-05 44.3 11.7 97 163-281 188-287 (412)
340 2v82_A 2-dehydro-3-deoxy-6-pho 90.6 1.3 4.3E-05 40.5 9.6 76 90-188 102-179 (212)
341 2ehh_A DHDPS, dihydrodipicolin 90.5 4.2 0.00015 39.6 13.9 167 63-274 38-220 (294)
342 1eye_A DHPS 1, dihydropteroate 90.5 2.5 8.6E-05 41.5 12.2 103 161-281 25-128 (280)
343 3qz6_A HPCH/HPAI aldolase; str 90.5 3.1 0.00011 40.2 12.7 82 170-275 29-110 (261)
344 2gou_A Oxidoreductase, FMN-bin 90.5 6.7 0.00023 39.5 15.7 153 100-276 165-340 (365)
345 3vcn_A Mannonate dehydratase; 90.5 1.9 6.5E-05 44.3 11.9 151 151-313 140-311 (425)
346 1p0k_A Isopentenyl-diphosphate 90.5 1.4 4.8E-05 43.8 10.5 87 88-184 178-279 (349)
347 1me8_A Inosine-5'-monophosphat 90.5 1.2 4E-05 46.9 10.5 89 89-184 285-380 (503)
348 1tqj_A Ribulose-phosphate 3-ep 90.5 0.94 3.2E-05 42.7 8.8 178 103-330 24-219 (230)
349 4hnl_A Mandelate racemase/muco 90.4 0.82 2.8E-05 46.7 9.0 146 151-310 143-302 (421)
350 1p4c_A L(+)-mandelate dehydrog 90.3 0.41 1.4E-05 48.7 6.6 90 80-184 216-306 (380)
351 1i4n_A Indole-3-glycerol phosp 90.0 4.8 0.00017 38.9 13.6 138 141-316 92-236 (251)
352 3p3b_A Mandelate racemase/muco 90.0 1.1 3.9E-05 45.2 9.5 125 165-309 150-284 (392)
353 3bo9_A Putative nitroalkan dio 89.9 1.3 4.5E-05 43.8 9.8 92 78-185 114-205 (326)
354 1w1z_A Delta-aminolevulinic ac 89.6 5.6 0.00019 40.1 13.9 168 92-285 54-278 (328)
355 1qwg_A PSL synthase;, (2R)-pho 89.6 1.9 6.5E-05 42.1 10.3 118 136-276 54-198 (251)
356 1ep3_A Dihydroorotate dehydrog 89.6 1.5 5E-05 42.2 9.6 91 88-184 164-269 (311)
357 1aj0_A DHPS, dihydropteroate s 89.5 4.2 0.00014 40.0 12.9 103 161-281 34-137 (282)
358 2vp8_A Dihydropteroate synthas 89.5 2.2 7.4E-05 42.9 11.0 103 161-281 61-164 (318)
359 2pge_A MENC; OSBS, NYSGXRC, PS 89.5 1.9 6.5E-05 43.3 10.7 128 160-312 159-293 (377)
360 3ewb_X 2-isopropylmalate synth 89.4 7.7 0.00026 38.0 14.8 150 102-273 33-186 (293)
361 2ozt_A TLR1174 protein; struct 89.4 3.7 0.00013 40.5 12.6 101 163-282 116-220 (332)
362 3noy_A 4-hydroxy-3-methylbut-2 89.3 5.1 0.00018 41.0 13.6 145 103-287 53-214 (366)
363 1vcf_A Isopentenyl-diphosphate 89.3 0.9 3.1E-05 44.9 8.1 96 79-184 172-284 (332)
364 3rmj_A 2-isopropylmalate synth 89.3 2.2 7.5E-05 43.4 11.1 109 132-257 120-233 (370)
365 3fcp_A L-Ala-D/L-Glu epimerase 89.3 2.1 7.3E-05 43.1 10.9 125 160-312 144-276 (381)
366 1yxy_A Putative N-acetylmannos 89.2 1.4 4.9E-05 40.8 8.9 80 89-184 133-214 (234)
367 3usb_A Inosine-5'-monophosphat 89.2 1 3.5E-05 47.6 8.9 118 166-313 256-391 (511)
368 1mxs_A KDPG aldolase; 2-keto-3 89.2 4.3 0.00015 38.4 12.3 175 80-316 18-200 (225)
369 2qr6_A IMP dehydrogenase/GMP r 89.1 6.4 0.00022 39.7 14.3 131 102-261 171-307 (393)
370 3dgb_A Muconate cycloisomerase 89.1 9.7 0.00033 38.3 15.7 126 160-313 145-278 (382)
371 1qpo_A Quinolinate acid phosph 89.1 0.92 3.1E-05 44.8 7.8 89 211-311 181-270 (284)
372 1w5q_A Delta-aminolevulinic ac 89.0 9.2 0.00032 38.7 15.0 170 92-285 56-285 (337)
373 4hb7_A Dihydropteroate synthas 89.0 3.6 0.00012 40.5 11.9 102 161-281 26-129 (270)
374 1wbh_A KHG/KDPG aldolase; lyas 89.0 8.5 0.00029 35.9 14.1 174 81-316 9-190 (214)
375 3v3w_A Starvation sensing prot 89.0 12 0.00042 38.3 16.5 150 150-313 138-310 (424)
376 3tji_A Mandelate racemase/muco 89.0 4 0.00014 42.0 12.8 148 150-312 143-305 (422)
377 2ekc_A AQ_1548, tryptophan syn 89.0 4.8 0.00017 38.5 12.7 111 150-273 19-141 (262)
378 1n8f_A DAHP synthetase; (beta/ 89.0 5.7 0.00019 40.5 13.7 70 149-218 256-348 (350)
379 1sjd_A N-acylamino acid racema 88.9 1.4 4.9E-05 43.8 9.2 119 162-312 140-265 (368)
380 2r14_A Morphinone reductase; H 88.8 5.1 0.00017 40.7 13.4 153 100-275 170-345 (377)
381 4dye_A Isomerase; enolase fami 88.8 7.9 0.00027 39.4 14.9 124 164-314 169-295 (398)
382 1gox_A (S)-2-hydroxy-acid oxid 88.8 2 6.7E-05 43.4 10.2 90 80-184 216-308 (370)
383 3i65_A Dihydroorotate dehydrog 88.8 2.3 7.8E-05 44.2 10.8 98 150-260 268-374 (415)
384 3ewb_X 2-isopropylmalate synth 88.8 3.3 0.00011 40.6 11.5 109 132-257 113-226 (293)
385 3i6e_A Muconate cycloisomerase 88.5 8.3 0.00028 38.9 14.7 125 160-313 145-276 (385)
386 1q6o_A Humps, 3-keto-L-gulonat 88.5 8.9 0.0003 35.2 13.8 137 142-316 47-197 (216)
387 3u9i_A Mandelate racemase/muco 88.5 1.1 3.7E-05 45.7 8.1 135 160-313 162-303 (393)
388 1icp_A OPR1, 12-oxophytodienoa 88.5 3.3 0.00011 42.0 11.7 155 100-276 171-348 (376)
389 3dip_A Enolase; structural gen 88.5 5.4 0.00019 40.7 13.4 104 168-282 161-270 (410)
390 1zlp_A PSR132, petal death pro 88.5 0.84 2.9E-05 45.9 7.2 85 171-261 52-137 (318)
391 3fa4_A 2,3-dimethylmalate lyas 88.4 6.1 0.00021 39.3 13.3 132 101-263 100-242 (302)
392 3r2g_A Inosine 5'-monophosphat 88.4 1 3.5E-05 45.9 7.8 82 89-184 141-227 (361)
393 1vqt_A Orotidine 5'-phosphate 88.2 1.9 6.6E-05 40.4 9.1 130 150-316 58-198 (213)
394 3o63_A Probable thiamine-phosp 88.1 0.79 2.7E-05 44.0 6.5 97 76-187 123-221 (243)
395 1tx2_A DHPS, dihydropteroate s 88.0 2.8 9.7E-05 41.5 10.6 131 164-314 62-209 (297)
396 1rpx_A Protein (ribulose-phosp 88.0 2.2 7.5E-05 39.4 9.3 166 102-316 29-213 (230)
397 1xg4_A Probable methylisocitra 87.9 1.2 4.2E-05 44.1 7.9 131 171-312 30-189 (295)
398 2r91_A 2-keto-3-deoxy-(6-phosp 87.9 7.6 0.00026 37.6 13.4 160 63-274 36-211 (286)
399 3n3m_A Orotidine 5'-phosphate 87.8 1.3 4.4E-05 45.0 8.1 143 149-316 148-318 (342)
400 1q7z_A 5-methyltetrahydrofolat 87.7 2.6 8.8E-05 45.3 10.8 126 134-274 210-378 (566)
401 3sr7_A Isopentenyl-diphosphate 87.7 1 3.5E-05 45.9 7.3 86 88-184 206-306 (365)
402 2zbt_A Pyridoxal biosynthesis 87.6 1.6 5.6E-05 42.1 8.5 92 89-186 125-239 (297)
403 1xi3_A Thiamine phosphate pyro 87.6 0.86 2.9E-05 41.2 6.1 94 78-187 99-192 (215)
404 3sbf_A Mandelate racemase / mu 87.6 4.2 0.00014 41.3 11.8 145 150-312 122-284 (401)
405 4e38_A Keto-hydroxyglutarate-a 87.6 1.7 5.9E-05 41.7 8.5 125 143-312 29-157 (232)
406 3ve9_A Orotidine-5'-phosphate 87.5 8.1 0.00028 36.3 13.0 155 143-329 43-201 (215)
407 2isw_A Putative fructose-1,6-b 87.5 25 0.00087 35.3 23.4 212 78-326 7-271 (323)
408 3iv3_A Tagatose 1,6-diphosphat 87.4 7 0.00024 39.4 13.2 142 169-321 114-291 (332)
409 2dqw_A Dihydropteroate synthas 87.4 1.1 3.9E-05 44.4 7.3 102 161-281 48-150 (294)
410 2qiw_A PEP phosphonomutase; st 87.4 1.8 6E-05 42.1 8.5 136 93-262 87-238 (255)
411 3eeg_A 2-isopropylmalate synth 87.4 3.7 0.00013 40.9 11.1 152 102-275 34-189 (325)
412 3elf_A Fructose-bisphosphate a 87.3 27 0.00092 35.4 21.3 222 80-327 12-293 (349)
413 1dos_A Aldolase class II; lyas 87.3 27 0.00094 35.5 18.9 229 78-327 18-305 (358)
414 3qm3_A Fructose-bisphosphate a 87.3 28 0.00094 35.5 20.9 233 76-328 19-305 (357)
415 1zfj_A Inosine monophosphate d 87.2 2.8 9.4E-05 43.4 10.4 90 88-184 274-364 (491)
416 3w01_A Heptaprenylglyceryl pho 87.2 5.9 0.0002 38.2 11.9 171 105-315 32-219 (235)
417 1qop_A Tryptophan synthase alp 87.1 7.7 0.00026 37.1 12.8 115 150-275 19-146 (268)
418 1xky_A Dihydrodipicolinate syn 86.9 2.9 9.8E-05 41.1 9.8 151 63-259 50-215 (301)
419 3ivs_A Homocitrate synthase, m 86.8 3 0.0001 43.3 10.4 133 102-257 116-252 (423)
420 3eoo_A Methylisocitrate lyase; 86.8 1.4 4.7E-05 43.9 7.5 130 171-312 35-193 (298)
421 2hsa_B 12-oxophytodienoate red 86.8 18 0.00061 37.0 16.1 160 100-276 175-366 (402)
422 3bg3_A Pyruvate carboxylase, m 86.8 13 0.00043 41.2 15.8 148 102-273 131-297 (718)
423 2bdq_A Copper homeostasis prot 86.8 2.1 7.2E-05 41.1 8.5 125 175-310 18-153 (224)
424 3ble_A Citramalate synthase fr 86.8 3.4 0.00012 41.2 10.4 136 101-258 101-243 (337)
425 3mzn_A Glucarate dehydratase; 86.8 4.3 0.00015 42.1 11.6 98 163-283 182-287 (450)
426 2chr_A Chloromuconate cycloiso 86.5 7.5 0.00026 38.5 12.8 101 160-281 139-243 (370)
427 3o07_A Pyridoxine biosynthesis 86.5 2.3 7.9E-05 42.3 8.8 115 89-218 115-252 (291)
428 2h9a_B CO dehydrogenase/acetyl 86.4 6.8 0.00023 39.0 12.3 124 104-262 82-210 (310)
429 1nvm_A HOA, 4-hydroxy-2-oxoval 86.3 20 0.00068 35.6 15.8 147 77-257 69-223 (345)
430 1w3i_A EDA, 2-keto-3-deoxy glu 86.3 8.2 0.00028 37.6 12.7 161 63-274 37-212 (293)
431 1zfj_A Inosine monophosphate d 86.2 9.8 0.00033 39.2 13.9 127 100-261 236-366 (491)
432 2qjg_A Putative aldolase MJ040 86.1 5.7 0.0002 37.5 11.2 64 103-184 173-236 (273)
433 3gnn_A Nicotinate-nucleotide p 86.1 2.9 9.9E-05 41.7 9.4 62 246-312 222-283 (298)
434 1kbi_A Cytochrome B2, L-LCR; f 85.9 16 0.00055 38.6 15.6 104 244-361 355-477 (511)
435 3ivs_A Homocitrate synthase, m 85.8 5.6 0.00019 41.3 11.7 147 102-274 67-217 (423)
436 3oix_A Putative dihydroorotate 85.6 2.5 8.7E-05 42.6 8.9 143 101-260 146-304 (345)
437 3tcs_A Racemase, putative; PSI 85.6 10 0.00035 38.4 13.5 128 163-312 146-282 (388)
438 2ffc_A Orotidine 5-monophospha 85.5 22 0.00075 36.1 15.7 146 142-315 154-329 (353)
439 4e4f_A Mannonate dehydratase; 85.5 6.9 0.00024 40.2 12.3 151 150-312 138-311 (426)
440 3p0w_A Mandelate racemase/muco 85.2 4.4 0.00015 42.4 10.8 99 162-283 199-305 (470)
441 3vnd_A TSA, tryptophan synthas 85.2 22 0.00077 34.4 15.1 164 151-331 18-204 (267)
442 3cyj_A Mandelate racemase/muco 85.1 8.4 0.00029 38.4 12.4 133 150-312 131-272 (372)
443 2fli_A Ribulose-phosphate 3-ep 85.0 2.8 9.6E-05 38.1 8.2 167 102-316 22-204 (220)
444 3qz6_A HPCH/HPAI aldolase; str 84.8 28 0.00097 33.3 22.0 205 80-330 5-255 (261)
445 1o4u_A Type II quinolic acid p 84.7 1.6 5.3E-05 43.2 6.7 87 211-312 179-270 (285)
446 2v9d_A YAGE; dihydrodipicolini 84.6 5.9 0.0002 39.7 11.0 131 102-274 119-254 (343)
447 1lt8_A Betaine-homocysteine me 84.4 9.2 0.00031 39.5 12.5 145 107-274 65-230 (406)
448 2y5s_A DHPS, dihydropteroate s 84.3 4.2 0.00014 40.3 9.6 100 163-281 44-144 (294)
449 3tha_A Tryptophan synthase alp 84.2 3.6 0.00012 39.9 8.9 166 105-316 37-233 (252)
450 1chr_A Chloromuconate cycloiso 84.2 6 0.0002 39.5 10.9 124 160-311 139-270 (370)
451 3l5a_A NADH/flavin oxidoreduct 84.2 7.2 0.00025 40.2 11.7 180 100-307 174-384 (419)
452 2wqp_A Polysialic acid capsule 84.2 15 0.0005 37.3 13.7 137 78-222 93-272 (349)
453 3lye_A Oxaloacetate acetyl hyd 84.1 13 0.00044 37.1 13.1 135 101-262 108-249 (307)
454 3tdn_A FLR symmetric alpha-bet 84.1 1.8 6.2E-05 40.5 6.6 70 241-315 36-113 (247)
455 3exr_A RMPD (hexulose-6-phosph 84.1 27 0.00093 32.5 15.1 181 91-316 9-202 (221)
456 4hpn_A Putative uncharacterize 84.1 12 0.0004 37.3 12.9 95 165-281 146-243 (378)
457 2hjp_A Phosphonopyruvate hydro 84.1 1.8 6.2E-05 42.8 6.8 84 171-262 28-112 (290)
458 3obk_A Delta-aminolevulinic ac 84.0 11 0.00039 38.2 12.6 170 92-285 63-292 (356)
459 3ovp_A Ribulose-phosphate 3-ep 83.9 16 0.00054 34.4 13.1 165 103-315 24-202 (228)
460 3vkj_A Isopentenyl-diphosphate 83.8 2.1 7E-05 43.6 7.3 97 78-184 176-295 (368)
461 2z6i_A Trans-2-enoyl-ACP reduc 83.8 3.6 0.00012 40.6 9.0 89 81-185 103-191 (332)
462 3ih1_A Methylisocitrate lyase; 83.8 3.2 0.00011 41.4 8.5 128 170-312 41-197 (305)
463 2tps_A Protein (thiamin phosph 83.8 1.8 6.3E-05 39.5 6.4 94 78-187 107-202 (227)
464 2agk_A 1-(5-phosphoribosyl)-5- 83.8 1.2 4.2E-05 42.9 5.4 68 241-315 39-108 (260)
465 3qja_A IGPS, indole-3-glycerol 83.7 3.7 0.00013 40.0 8.8 87 80-184 153-241 (272)
466 2yzr_A Pyridoxal biosynthesis 83.7 2.3 7.8E-05 43.0 7.5 85 150-259 17-102 (330)
467 2bmb_A Folic acid synthesis pr 83.5 12 0.00043 40.1 13.4 107 163-284 247-363 (545)
468 3paj_A Nicotinate-nucleotide p 83.3 2.7 9.1E-05 42.4 7.7 87 211-311 218-304 (320)
469 3aty_A Tcoye, prostaglandin F2 83.1 16 0.00055 37.1 13.6 151 100-276 178-354 (379)
470 2opj_A O-succinylbenzoate-COA 83.1 9.7 0.00033 37.7 11.7 101 161-283 78-179 (327)
471 1vli_A Spore coat polysacchari 83.1 18 0.0006 37.3 13.9 135 76-218 101-280 (385)
472 3nav_A Tryptophan synthase alp 83.0 25 0.00087 34.1 14.5 163 151-330 20-205 (271)
473 3gnn_A Nicotinate-nucleotide p 83.0 3.6 0.00012 41.0 8.5 142 78-262 135-283 (298)
474 2qr6_A IMP dehydrogenase/GMP r 83.0 2.3 7.9E-05 42.9 7.3 90 88-186 211-307 (393)
475 3ngj_A Deoxyribose-phosphate a 83.0 4.2 0.00014 39.3 8.7 100 135-259 126-228 (239)
476 2fds_A Orotidine-monophosphate 82.9 5.4 0.00018 40.6 9.9 108 149-277 150-279 (352)
477 3fok_A Uncharacterized protein 82.8 14 0.00047 37.1 12.6 147 170-332 133-298 (307)
478 2w6r_A Imidazole glycerol phos 82.6 1.7 5.8E-05 40.9 5.8 69 241-314 31-107 (266)
479 2uva_G Fatty acid synthase bet 82.6 29 0.00099 42.8 17.6 191 80-316 575-801 (2060)
480 4a29_A Engineered retro-aldol 82.6 38 0.0013 33.1 15.6 149 143-333 97-251 (258)
481 3pfr_A Mandelate racemase/muco 82.5 5.4 0.00018 41.5 10.0 98 163-283 185-290 (455)
482 2cu0_A Inosine-5'-monophosphat 82.4 1.7 6E-05 45.2 6.3 82 91-184 271-356 (486)
483 1h5y_A HISF; histidine biosynt 82.4 3.6 0.00012 37.6 7.8 69 102-186 160-228 (253)
484 1p4c_A L(+)-mandelate dehydrog 82.4 1.8 6.1E-05 44.0 6.2 70 243-317 236-314 (380)
485 2yr1_A 3-dehydroquinate dehydr 82.1 37 0.0013 32.6 15.9 118 134-272 61-189 (257)
486 1u83_A Phosphosulfolactate syn 82.0 3.1 0.00011 41.1 7.5 117 110-263 66-195 (276)
487 1s2w_A Phosphoenolpyruvate pho 81.5 8.7 0.0003 38.0 10.6 133 101-261 99-239 (295)
488 3b8i_A PA4872 oxaloacetate dec 81.4 5.6 0.00019 39.3 9.2 129 101-261 102-235 (287)
489 3daq_A DHDPS, dihydrodipicolin 81.4 7.6 0.00026 37.8 10.1 170 107-312 34-209 (292)
490 3i4e_A Isocitrate lyase; struc 81.2 34 0.0011 35.9 15.3 144 101-261 172-353 (439)
491 1thf_D HISF protein; thermophI 81.2 2 6.7E-05 40.1 5.6 70 241-315 31-108 (253)
492 3mwc_A Mandelate racemase/muco 81.1 9 0.00031 38.9 10.9 119 164-314 164-289 (400)
493 3qfw_A Ribulose-1,5-bisphospha 81.1 41 0.0014 34.5 15.7 130 140-281 120-252 (378)
494 3dz1_A Dihydrodipicolinate syn 80.6 8.1 0.00028 38.0 10.1 192 106-332 39-237 (313)
495 3qze_A DHDPS, dihydrodipicolin 80.6 8.1 0.00028 38.1 10.1 170 106-312 54-229 (314)
496 3tsm_A IGPS, indole-3-glycerol 80.5 4.1 0.00014 39.9 7.8 86 224-315 58-154 (272)
497 3eb2_A Putative dihydrodipicol 80.5 17 0.00057 35.6 12.2 172 59-274 38-223 (300)
498 3inp_A D-ribulose-phosphate 3- 80.4 4.8 0.00016 38.8 8.1 179 90-315 28-228 (246)
499 2yyu_A Orotidine 5'-phosphate 80.4 39 0.0013 31.8 16.0 149 143-316 49-221 (246)
500 2y88_A Phosphoribosyl isomeras 80.4 2.4 8E-05 39.3 5.8 69 241-315 32-108 (244)
No 1
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=100.00 E-value=4.1e-75 Score=580.99 Aligned_cols=289 Identities=31% Similarity=0.492 Sum_probs=274.2
Q ss_pred ccCchHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCc
Q 012478 73 ACLSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIP 152 (462)
Q Consensus 73 ~a~~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iP 152 (462)
..++++++||++|++++++++|||||++||++++++|||+||+||++++++++|+||++.+|++||++|+++|++++++|
T Consensus 6 ~~~~~~~~lr~l~~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~~P 85 (298)
T 3eoo_A 6 QLISAGAKFRAAVAAEQPLQVVGAITAYAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATNLP 85 (298)
T ss_dssp -CCCHHHHHHHHHHHSSSEEEEECSSHHHHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCCSC
T ss_pred ccccHHHHHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcCCe
Confidence 35678999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecc
Q 012478 153 VIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTD 232 (462)
Q Consensus 153 VIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTD 232 (462)
||+|+|+|||+++++.+++++|+++||+|||||||++||+|||++||+|+|.+||++||+||++|++ ++||+|+||||
T Consensus 86 viaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~--~~~~~I~ARTD 163 (298)
T 3eoo_A 86 LLVDIDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDART--DETFVIMARTD 163 (298)
T ss_dssp EEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCS--STTSEEEEEEC
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhcc--CCCeEEEEeeh
Confidence 9999999999999999999999999999999999999999999999999999999999999999986 68999999999
Q ss_pred hhhcccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccch
Q 012478 233 SRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLS 312 (462)
Q Consensus 233 A~~~~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ 312 (462)
++...++||+|+|+++|++||||+||+|++++.+++++|++.++ +|+++|++++ |++|.++.+||+++||++|+||++
T Consensus 164 a~~~~gldeai~Ra~ay~~AGAD~if~~~~~~~ee~~~~~~~~~-~Pl~~n~~~~-g~tp~~~~~eL~~lGv~~v~~~~~ 241 (298)
T 3eoo_A 164 AAAAEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEAVK-VPILANLTEF-GSTPLFTLDELKGANVDIALYCCG 241 (298)
T ss_dssp THHHHHHHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHHC-SCBEEECCTT-SSSCCCCHHHHHHTTCCEEEECSH
T ss_pred hhhhcCHHHHHHHHHhhHhcCCCEEEeCCCCCHHHHHHHHHHcC-CCeEEEeccC-CCCCCCCHHHHHHcCCeEEEEchH
Confidence 99888999999999999999999999999999999999999997 7999999997 789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHc-CCCC-CCCCCCCHHHHHHhcCcccHHHHHHhhcccc
Q 012478 313 LIGVSVRAMQDALTAIKG-GRIP-SPGSMPSFQEIKETLGFNTYYEEEKRYATSM 365 (462)
Q Consensus 313 ll~aa~~Am~~~l~~l~~-g~~~-~~~~~~s~~e~~~lvg~~~~~~~e~~y~~~~ 365 (462)
++++++.||+++++.|++ |+.. ..+.|++|+|+++++||++|++++++|...+
T Consensus 242 ~~raa~~a~~~~~~~i~~~g~~~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~ 296 (298)
T 3eoo_A 242 AYRAMNKAALNFYETVRRDGTQKAAVPTMQTRAQLYDYLGYYAYEEKLDQLFNQG 296 (298)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSSGGGGGGSCCHHHHHHHTTHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCccchhhcCCCHHHHHHHcCHHHHHHHHHHHhccc
Confidence 999999999999999986 4443 4567889999999999999999999997543
No 2
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=100.00 E-value=1e-74 Score=578.80 Aligned_cols=289 Identities=35% Similarity=0.562 Sum_probs=265.4
Q ss_pred CchHHHHHHHHhCCC-ceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhc-CCc
Q 012478 75 LSPAKSLRQILELPG-VHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV-SIP 152 (462)
Q Consensus 75 ~~~a~~LR~ll~~~~-~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~-~iP 152 (462)
++++++||++|++++ ++++|||||++||++++++||++||+||++++++++|+||++.+|++||++|+++|++++ ++|
T Consensus 3 ~~~~~~Lr~ll~~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~~P 82 (302)
T 3fa4_A 3 VTAATSLRRALENPDSFIVAPGVYDGLSARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTP 82 (302)
T ss_dssp CCHHHHHHHHHHSTTCCEEEEEECSHHHHHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSC
T ss_pred CCHHHHHHHHHhCCCCeEEEecCcCHHHHHHHHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccCCC
Confidence 467899999999875 689999999999999999999999999999988889999999999999999999999986 899
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecc
Q 012478 153 VIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTD 232 (462)
Q Consensus 153 VIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTD 232 (462)
||+|+|+|||+++|+.+++++|+++||+|||||||++||||||+.||+|+|.+|+++||+||++|+++.++||+|+||||
T Consensus 83 viaD~d~Gyg~~~~v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTD 162 (302)
T 3fa4_A 83 VIADADTGYGGPIMVARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTD 162 (302)
T ss_dssp EEEECTTTTSSHHHHHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEEC
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999987789999999999
Q ss_pred hhhcccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccch
Q 012478 233 SRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLS 312 (462)
Q Consensus 233 A~~~~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ 312 (462)
++...++||||+|+++|.+||||+||+|++.+.+++++|++.++++|+++||+++ |++|.++.+||+++||++|+||++
T Consensus 163 a~~~~gldeAi~Ra~ay~eAGAD~ifi~g~~~~~ei~~~~~~~~~~Pl~~n~~~~-g~~p~~~~~eL~~lGv~~v~~~~~ 241 (302)
T 3fa4_A 163 SLQTHGYEESVARLRAARDAGADVGFLEGITSREMARQVIQDLAGWPLLLNMVEH-GATPSISAAEAKEMGFRIIIFPFA 241 (302)
T ss_dssp CHHHHCHHHHHHHHHHHHTTTCSEEEETTCCCHHHHHHHHHHTTTSCEEEECCTT-SSSCCCCHHHHHHHTCSEEEETTT
T ss_pred ccccCCHHHHHHHHHHHHHcCCCEEeecCCCCHHHHHHHHHHhcCCceeEEEecC-CCCCCCCHHHHHHcCCCEEEEchH
Confidence 9988899999999999999999999999999999999999999768999999986 779999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHhcCcccHHHHHHhhccc
Q 012478 313 LIGVSVRAMQDALTAIKGGRIPSPGSMPSFQEIKETLGFNTYYEEEKRYATS 364 (462)
Q Consensus 313 ll~aa~~Am~~~l~~l~~g~~~~~~~~~s~~e~~~lvg~~~~~~~e~~y~~~ 364 (462)
++++++.||++++++|++++....+.|++++|+++++||++|+++|++|...
T Consensus 242 ~~raa~~A~~~~~~~i~~~g~~~~~~~~~~~el~~~~g~~~~~~~~~~~~~~ 293 (302)
T 3fa4_A 242 ALGPAVAAMREAMEKLKRDGIPGLDKEMTPQMLFRVCGLDESMKVDAQAGGA 293 (302)
T ss_dssp THHHHHHHHHHHHHHHHHHSSCCCCTTCCHHHHHHHTTHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcccCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 9999999999999999874433347788999999999999999999999743
No 3
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=100.00 E-value=1.2e-74 Score=579.61 Aligned_cols=288 Identities=33% Similarity=0.532 Sum_probs=265.4
Q ss_pred cCchHHHHHHHHhCC-CceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcC--
Q 012478 74 CLSPAKSLRQILELP-GVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVS-- 150 (462)
Q Consensus 74 a~~~a~~LR~ll~~~-~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~-- 150 (462)
.+.++++||++|+++ +++++|||||++||++++++||++||+||++++++++|+||++.+|++||++|+++|+++++
T Consensus 9 ~~~~a~~lr~ll~~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~~ 88 (307)
T 3lye_A 9 PFSGAKKLRHLLENTDELIVCPGVYDGLSARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPFG 88 (307)
T ss_dssp TTCHHHHHHHHHHHCCCCEEEEEECSHHHHHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTTS
T ss_pred chhHHHHHHHHHhCCCCeEEEecCcCHHHHHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCCC
Confidence 567899999999875 68999999999999999999999999999999888899999999999999999999999875
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEe
Q 012478 151 IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVAR 230 (462)
Q Consensus 151 iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiAR 230 (462)
+|||+|+|+|||+++|+.+++++|+++||+|||||||++||+|||++||+|+|.+||++||+||++|+++.|+||+|+||
T Consensus 89 ~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~AR 168 (307)
T 3lye_A 89 PPLIADMDTGYGGPIMVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIAR 168 (307)
T ss_dssp CCEEEECTTCSSSHHHHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CcEEEECCCCCCCHHHHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999887899999999
Q ss_pred cchhhcccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEecc
Q 012478 231 TDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYP 310 (462)
Q Consensus 231 TDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp 310 (462)
||++...++||+|+|+++|.+||||+||+|++++.+++++|++.++.+|+++||+++ |++|.++.+||+++||++|+||
T Consensus 169 TDa~~~~gldeAi~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~~~~~Pv~~n~~~~-g~~p~~t~~eL~~lGv~~v~~~ 247 (307)
T 3lye_A 169 TDALQSLGYEECIERLRAARDEGADVGLLEGFRSKEQAAAAVAALAPWPLLLNSVEN-GHSPLITVEEAKAMGFRIMIFS 247 (307)
T ss_dssp ECCHHHHCHHHHHHHHHHHHHTTCSEEEECCCSCHHHHHHHHHHHTTSCBEEEEETT-SSSCCCCHHHHHHHTCSEEEEE
T ss_pred chhhhccCHHHHHHHHHHHHHCCCCEEEecCCCCHHHHHHHHHHccCCceeEEeecC-CCCCCCCHHHHHHcCCeEEEEC
Confidence 999988899999999999999999999999999999999999998768999999997 7799999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHhcCcccHHHHHHhhcc
Q 012478 311 LSLIGVSVRAMQDALTAIKG-GRIPSPGSMPSFQEIKETLGFNTYYEEEKRYAT 363 (462)
Q Consensus 311 ~~ll~aa~~Am~~~l~~l~~-g~~~~~~~~~s~~e~~~lvg~~~~~~~e~~y~~ 363 (462)
++++++++.||++++++|++ |+... +.|++++|+++++||++|+++|++|..
T Consensus 248 ~~~~raa~~a~~~~~~~l~~~g~~~~-~~~~~~~el~~~~g~~~~~~~~~~~~~ 300 (307)
T 3lye_A 248 FATLAPAYAAIRETLVRLRDHGVVGT-PDGITPVRLFEVCGLQDAMEVDNGAGG 300 (307)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHSCCCC-CTTCCHHHHHHHTTHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCc-cccCCHHHHHHhcChHHHHHHHHHhCc
Confidence 99999999999999999986 44433 778899999999999999999999974
No 4
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=100.00 E-value=3.3e-72 Score=561.57 Aligned_cols=284 Identities=34% Similarity=0.562 Sum_probs=269.9
Q ss_pred cCchHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcE
Q 012478 74 CLSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPV 153 (462)
Q Consensus 74 a~~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPV 153 (462)
++.++++||++|++++++++|||||++||++++++|||+||+||+++++ ++|+||++.+|++||++|+++|++++++||
T Consensus 14 ~~~~a~~lr~l~~~~~~i~~~~ayD~~sA~l~e~aG~dai~vs~~s~a~-~~G~pD~~~vt~~em~~~~~~I~r~~~~pv 92 (305)
T 3ih1_A 14 QEELANRFRALVEANEILQIPGAHDAMAALVARNTGFLALYLSGAAYTA-SKGLPDLGIVTSTEVAERARDLVRATDLPV 92 (305)
T ss_dssp HHHHHHHHHHHHHSSSCEEEEBCSSHHHHHHHHHTTCSCEEECHHHHHH-HHTCCSSSCSCHHHHHHHHHHHHHHHCCCE
T ss_pred hHHHHHHHHHHHhCCCcEEEecCcCHHHHHHHHHcCCCEEEECcHHHHH-hCCCCCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 3577899999999999999999999999999999999999999999987 479999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecch
Q 012478 154 IGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDS 233 (462)
Q Consensus 154 IaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA 233 (462)
|+|+|+|||+++|+.+++++|+++||+|||||||.+||+|||++||+|+|.+|+++||+|+++| +++|+|+||||+
T Consensus 93 iaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A----~~~~~I~ARtda 168 (305)
T 3ih1_A 93 LVDIDTGFGGVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV----APSLYIVARTDA 168 (305)
T ss_dssp EEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH----CTTSEEEEEECC
T ss_pred EEECCCCCCCHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc----CCCeEEEEeecc
Confidence 9999999999999999999999999999999999999999999999999999999999999999 579999999999
Q ss_pred hhcccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchH
Q 012478 234 RQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSL 313 (462)
Q Consensus 234 ~~~~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~l 313 (462)
++..+++++|+||++|++||||+||+|++++.+++++|++.++ +|+++||+++ |++|.++.+||+++||++|+||+++
T Consensus 169 ~~~~g~~~ai~Ra~ay~eAGAD~i~~e~~~~~~~~~~i~~~~~-~P~~~n~~~~-g~tp~~~~~eL~~lGv~~v~~~~~~ 246 (305)
T 3ih1_A 169 RGVEGLDEAIERANAYVKAGADAIFPEALQSEEEFRLFNSKVN-APLLANMTEF-GKTPYYSAEEFANMGFQMVIYPVTS 246 (305)
T ss_dssp HHHHCHHHHHHHHHHHHHHTCSEEEETTCCSHHHHHHHHHHSC-SCBEEECCTT-SSSCCCCHHHHHHTTCSEEEECSHH
T ss_pred ccccCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHcC-CCEEEeecCC-CCCCCCCHHHHHHcCCCEEEEchHH
Confidence 9888999999999999999999999999999999999999998 6999999986 7899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHc-CCCC-CCCCCCCHHHHHHhcCcccHHHHHHhhccc
Q 012478 314 IGVSVRAMQDALTAIKG-GRIP-SPGSMPSFQEIKETLGFNTYYEEEKRYATS 364 (462)
Q Consensus 314 l~aa~~Am~~~l~~l~~-g~~~-~~~~~~s~~e~~~lvg~~~~~~~e~~y~~~ 364 (462)
+++++.||++++++|++ |+.. ..+.+++|+|+++++||++|+++|++|.+.
T Consensus 247 ~raa~~a~~~~~~~i~~~g~~~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~ 299 (305)
T 3ih1_A 247 LRVAAKAYENVFTLIKETGSQKDALSNMQTRSELYETISYHDFEELDTGIAKT 299 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCGGGGGGSCCHHHHHHHTTHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHhcCCcccchhcCCCHHHHHHHcChHHHHHHHHhhccc
Confidence 99999999999999986 4443 467788999999999999999999999754
No 5
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=100.00 E-value=1.6e-71 Score=559.29 Aligned_cols=296 Identities=39% Similarity=0.634 Sum_probs=268.5
Q ss_pred ccccCCCccccccCchHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHH
Q 012478 62 RVYRKNSTGVEACLSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQ 141 (462)
Q Consensus 62 R~y~rgs~~~~~a~~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~ 141 (462)
|+...|+.... +..++++||++|++++++++|||||++||++++++|||+||+||++++++++|+||++.+|++||++|
T Consensus 13 ~~~~~~~~~~~-~~~~~~~lr~l~~~~~~i~~~~ayD~~sA~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~ 91 (318)
T 1zlp_A 13 EVATQGSYTAV-STGRKTTMHRLIEEHGSVLMPGVQDALSAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEA 91 (318)
T ss_dssp ----------------CCHHHHHHHHSSSEEEEEECSHHHHHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHH
T ss_pred eeecccccccc-chhHHHHHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHH
Confidence 44444444433 34557789999999999999999999999999999999999999999877899999999999999999
Q ss_pred HHHHHhhc-CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHh
Q 012478 142 GQLITQAV-SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKE 220 (462)
Q Consensus 142 ~~~I~ra~-~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~ 220 (462)
+++|++++ ++|||+|+|+|||+++|+.+++++|+++||+|||||||.+||+|||++||+|+|++|+++||+|+++|++.
T Consensus 92 ~~~I~r~~~~~PviaD~d~Gyg~~~~v~~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~ 171 (318)
T 1zlp_A 92 TRRITAAAPNLCVVVDGDTGGGGPLNVQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGD 171 (318)
T ss_dssp HHHHHHHSSSSEEEEECTTCSSSHHHHHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhhccCCCEEEeCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhccc
Confidence 99999999 89999999999999999999999999999999999999999999999999999999999999999999974
Q ss_pred hCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHH
Q 012478 221 SGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE 300 (462)
Q Consensus 221 ~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~ 300 (462)
++|+|+||||+.+..+++++|+||++|++||||+||+|++++.+++++|++.++ +|+++|++++ |++|.++.+||+
T Consensus 172 --~~~~I~ARtda~a~~gl~~ai~Ra~Ay~eAGAd~i~~e~~~~~e~~~~i~~~l~-~P~lan~~~~-g~~~~~~~~eL~ 247 (318)
T 1zlp_A 172 --SDFFLVARTDARAPHGLEEGIRRANLYKEAGADATFVEAPANVDELKEVSAKTK-GLRIANMIEG-GKTPLHTPEEFK 247 (318)
T ss_dssp --SCCEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHSC-SEEEEEECTT-SSSCCCCHHHHH
T ss_pred --CCcEEEEeeHHhhhcCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhcC-CCEEEEeccC-CCCCCCCHHHHH
Confidence 799999999999888999999999999999999999999999999999999998 7999999996 788999999999
Q ss_pred hcCCCEEeccchHHHHHHHHHHHHHHHHHc-CCCC-CCCCCCCHHHHHHhcCcccHHHHHHhhc
Q 012478 301 ELGFKLVAYPLSLIGVSVRAMQDALTAIKG-GRIP-SPGSMPSFQEIKETLGFNTYYEEEKRYA 362 (462)
Q Consensus 301 ~lGv~~V~yp~~ll~aa~~Am~~~l~~l~~-g~~~-~~~~~~s~~e~~~lvg~~~~~~~e~~y~ 362 (462)
++||++|+||++++++++.||+++++.|++ |+.. ..+.+++++|+++++||++|+++|++|.
T Consensus 248 ~lGv~~v~~~~~~~raa~~a~~~~~~~l~~~g~~~~~~~~~~~~~el~~l~~~~~~~~~~~~~~ 311 (318)
T 1zlp_A 248 EMGFHLIAHSLTAVYATARALVNIMKILKEKGTTRDDLDQMATFSEFNELISLESWYEMESKFK 311 (318)
T ss_dssp HHTCCEEEECSHHHHHHHHHHHHHHHHHHHHSCSTTCGGGSCCHHHHHHHHTHHHHHHHHHHTC
T ss_pred HcCCeEEEEchHHHHHHHHHHHHHHHHHHHcCCcccccccCCCHHHHHHhcCHHHHHHHHHHhc
Confidence 999999999999999999999999999987 5543 3567899999999999999999999993
No 6
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=100.00 E-value=1.2e-70 Score=548.25 Aligned_cols=283 Identities=34% Similarity=0.531 Sum_probs=268.2
Q ss_pred chHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEE
Q 012478 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIG 155 (462)
Q Consensus 76 ~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIa 155 (462)
+++++||++|++++++++|||||++||++++++|||+||+||++++++++|+||++.+|++||++|+++|++++++|||+
T Consensus 4 ~~~~~lr~l~~~~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~Pvia 83 (295)
T 1xg4_A 4 SPGKAFRAALTKENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLV 83 (295)
T ss_dssp CHHHHHHHHHHHSSSEEEEECSSHHHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEE
T ss_pred hHHHHHHHHHhCCCcEEEecCcCHHHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEe
Confidence 46889999999999999999999999999999999999999999987789999999999999999999999999999999
Q ss_pred eCCCCCC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchh
Q 012478 156 DGDNGYG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSR 234 (462)
Q Consensus 156 D~DtGyG-~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~ 234 (462)
|+|+||| +++|+.+++++|+++||+|||||||.+||+|||.+||+|+|++++++||+|+++|+. +++|+|+||||+.
T Consensus 84 D~d~Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~--~~~~~i~aRtda~ 161 (295)
T 1xg4_A 84 DADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKT--DPDFVIMARTDAL 161 (295)
T ss_dssp ECTTCSSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCS--STTSEEEEEECCH
T ss_pred cCCcccCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhcc--CCCcEEEEecHHh
Confidence 9999999 899999999999999999999999999999999999999999999999999999987 5799999999998
Q ss_pred hcccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHH
Q 012478 235 QALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLI 314 (462)
Q Consensus 235 ~~~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll 314 (462)
...+++++|+||++|++||||+||+|++++.+++++|++.++ +|+++|++++ |++|.++.+||+++||++|+||++++
T Consensus 162 ~~~gl~~ai~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~-iP~~~N~~~~-g~~p~~~~~eL~~~G~~~v~~~~~~~ 239 (295)
T 1xg4_A 162 AVEGLDAAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQ-VPILANITEF-GATPLFTTDELRSAHVAMALYPLSAF 239 (295)
T ss_dssp HHHCHHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHC-SCBEEECCSS-SSSCCCCHHHHHHTTCSEEEESSHHH
T ss_pred hhcCHHHHHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHcC-CCEEEEeccc-CCCCCCCHHHHHHcCCCEEEEChHHH
Confidence 888999999999999999999999999999999999999997 7999999986 67999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHc-CCCC-CCCCCCCHHHHHHhcCcccHHHHHHhhc
Q 012478 315 GVSVRAMQDALTAIKG-GRIP-SPGSMPSFQEIKETLGFNTYYEEEKRYA 362 (462)
Q Consensus 315 ~aa~~Am~~~l~~l~~-g~~~-~~~~~~s~~e~~~lvg~~~~~~~e~~y~ 362 (462)
++++.||+++++.|++ |+.. ..+.|++++|+++++||++|+++|++|.
T Consensus 240 ~aa~~a~~~~~~~i~~~g~~~~~~~~~~~~~e~~~l~~~~~~~~~~~~~~ 289 (295)
T 1xg4_A 240 RAMNRAAEHVYNVLRQEGTQKSVIDTMQTRNELYESINYYQYEEKLDNLF 289 (295)
T ss_dssp HHHHHHHHHHHHHHHHHSSSGGGGGGSCCHHHHHHHTTHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHhCCcccccccCCCHHHHHHHcCHHHHHHHHHHHh
Confidence 9999999999999987 5443 3567889999999999999999999997
No 7
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=100.00 E-value=9.2e-70 Score=540.66 Aligned_cols=281 Identities=32% Similarity=0.492 Sum_probs=260.8
Q ss_pred CchHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEE
Q 012478 75 LSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVI 154 (462)
Q Consensus 75 ~~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVI 154 (462)
|+++++||++|++++++++|||||++||++++++|||+||+||++++++ +|+||++.+|++||++|+++|++++++|||
T Consensus 1 m~~~~~lr~l~~~~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~-~G~pD~~~vt~~em~~~~~~I~~~~~~Pvi 79 (290)
T 2hjp_A 1 MTKNQALRAALDSGRLFTAMAAHNPLVAKLAEQAGFGGIWGSGFELSAS-YAVPDANILSMSTHLEMMRAIASTVSIPLI 79 (290)
T ss_dssp CCHHHHHHHHHHHCCCEEEEECSSHHHHHHHHHHTCSEEEECHHHHHHH-TTSCTTTCSCHHHHHHHHHHHHTTCSSCEE
T ss_pred CChHHHHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEEChHHHHHh-CCCCCCCCCCHHHHHHHHHHHHhcCCCCEE
Confidence 4678899999999999999999999999999999999999999999877 999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCC--CCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecc
Q 012478 155 GDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTR--GRKVVSREEAVMRIKAAVDARKESGSDIVIVARTD 232 (462)
Q Consensus 155 aD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~--gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTD 232 (462)
+|+|+|||+++|+.+++++|+++||+|||||||.+||+|||++ ||+|+|++|+++||+|+++++.. ++|+|+||||
T Consensus 80 aD~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~--~~~~i~aRtd 157 (290)
T 2hjp_A 80 ADIDTGFGNAVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARAD--RDFVVIARVE 157 (290)
T ss_dssp EECTTTTSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSS--TTSEEEEEEC
T ss_pred EECCCCCCCHHHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhccc--CCcEEEEeeh
Confidence 9999999999999999999999999999999999999999999 99999999999999999999875 6899999999
Q ss_pred hh-hcccHHHHHHHHHHhHhcCCcEEEecC-CCCHHHHHHHHHhCCC-CceeeeeeecCCCCCCCCHHHHHhcC-CCEEe
Q 012478 233 SR-QALSLEESLRRSRAFADAGADVLFIDA-LASKEEMKAFCEISPL-VPKMANMLEGGGKTPILNPLELEELG-FKLVA 308 (462)
Q Consensus 233 A~-~~~gldeAI~RakAy~eAGAD~Ifie~-~~s~eei~~i~~~v~~-vP~~~N~l~~~g~tP~ls~~eL~~lG-v~~V~ 308 (462)
+. +..+++++|+||++|++||||+||+|+ +++.+++++|++.++. +|+++|++++ |.++.+||+++| |++|+
T Consensus 158 a~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~~vP~i~n~~~~----~~~~~~eL~~lG~v~~v~ 233 (290)
T 2hjp_A 158 ALIAGLGQQEAVRRGQAYEEAGADAILIHSRQKTPDEILAFVKSWPGKVPLVLVPTAY----PQLTEADIAALSKVGIVI 233 (290)
T ss_dssp TTTTTCCHHHHHHHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHCCCSSCEEECGGGC----TTSCHHHHHTCTTEEEEE
T ss_pred HhhccccHHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcCCCCCEEEeccCC----CCCCHHHHHhcCCeeEEE
Confidence 98 678999999999999999999999999 9998999999999974 7888888764 678999999999 99999
Q ss_pred ccchHHHHHHHHHHHHHHHHHc-CCCC-CCCCCCCHHHHHHhcCcccHHHHHHhhc
Q 012478 309 YPLSLIGVSVRAMQDALTAIKG-GRIP-SPGSMPSFQEIKETLGFNTYYEEEKRYA 362 (462)
Q Consensus 309 yp~~ll~aa~~Am~~~l~~l~~-g~~~-~~~~~~s~~e~~~lvg~~~~~~~e~~y~ 362 (462)
||++++++++.||+++++.|++ |+.. ..+.+++++|+++++|+++|+++|++|.
T Consensus 234 ~~~~~~raa~~a~~~~~~~i~~~g~~~~~~~~~~~~~e~~~l~~~~~~~~~~~~~~ 289 (290)
T 2hjp_A 234 YGNHAIRAAVGAVREVFARIRRDGGIREVDAALPSVKEIIELQGDERMRAVEARYL 289 (290)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHHHTSSTTTTTTSCCHHHHHHHTTHHHHHHHHHHHC
T ss_pred echHHHHHHHHHHHHHHHHHHHcCCcccccccCCCHHHHHHHcCHHHHHHHHHhhc
Confidence 9999999999999999999987 5543 4567899999999999999999999995
No 8
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=100.00 E-value=7.7e-70 Score=540.55 Aligned_cols=277 Identities=26% Similarity=0.416 Sum_probs=261.5
Q ss_pred chHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEE
Q 012478 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIG 155 (462)
Q Consensus 76 ~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIa 155 (462)
.++++||++|++++++++|||||++||++++++|||+||+||++++++++|+||++.+|++||++|+++|++++++|||+
T Consensus 8 ~~~~~lr~l~~~~~~i~~~~a~D~~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~Pvia 87 (287)
T 3b8i_A 8 ELRAMFRALLDSSRCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIA 87 (287)
T ss_dssp HHHHHHHHHHHSSCCEECEECCSHHHHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEE
T ss_pred HHHHHHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEE
Confidence 56789999999999999999999999999999999999999999987789999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhh
Q 012478 156 DGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQ 235 (462)
Q Consensus 156 D~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~ 235 (462)
|+|+|||+++|+.+++++|+++||+|||||||.+||||||..|| |+|.+|+++||+|+++|+. +++|+|+||||+ +
T Consensus 88 D~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~gk-l~~~~e~~~~I~aa~~a~~--~~~~~i~aRtda-a 163 (287)
T 3b8i_A 88 DADHGYGNALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTD-LICVEEGVGKIRAALEARV--DPALTIIARTNA-E 163 (287)
T ss_dssp ECTTCSSSHHHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTTC-BCCHHHHHHHHHHHHHHCC--STTSEEEEEEET-T
T ss_pred ECCCCCCCHHHHHHHHHHHHHhCCeEEEEcCCCCccccCCCCCC-ccCHHHHHHHHHHHHHcCC--CCCcEEEEechh-h
Confidence 99999999999999999999999999999999999999999999 9999999999999999987 479999999999 8
Q ss_pred cccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012478 236 ALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 236 ~~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
..+++++|+||++|++||||+||+|++++.+++++|++.++ +|+. ++++ |++|.++.+||+++||++|+||+++++
T Consensus 164 ~~gl~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~-~P~i--i~~~-g~~~~~~~~eL~~lGv~~v~~~~~~~r 239 (287)
T 3b8i_A 164 LIDVDAVIQRTLAYQEAGADGICLVGVRDFAHLEAIAEHLH-IPLM--LVTY-GNPQLRDDARLARLGVRVVVNGHAAYF 239 (287)
T ss_dssp TSCHHHHHHHHHHHHHTTCSEEEEECCCSHHHHHHHHTTCC-SCEE--EECT-TCGGGCCHHHHHHTTEEEEECCCHHHH
T ss_pred hcCHHHHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHhCC-CCEE--EeCC-CCCCCCCHHHHHHcCCcEEEEChHHHH
Confidence 88999999999999999999999999999999999999986 5654 7775 788999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHhcCcccHHHHHHhhccc
Q 012478 316 VSVRAMQDALTAIKG-GRIPSPGSMPSFQEIKETLGFNTYYEEEKRYATS 364 (462)
Q Consensus 316 aa~~Am~~~l~~l~~-g~~~~~~~~~s~~e~~~lvg~~~~~~~e~~y~~~ 364 (462)
++++| ++++|++ |+.. .+.+++++|+++++|+++|+++|++|...
T Consensus 240 aa~~a---~~~~l~~~g~~~-~~~~~~~~el~~l~~~~~~~~~~~~~~~~ 285 (287)
T 3b8i_A 240 AAIKA---TYDCLREERGAV-ASDLTASELSKKYTFPEEYQAWARDYMEV 285 (287)
T ss_dssp HHHHH---HHHHHHHHHTCC-CCCSCHHHHHHHTTCHHHHHHHHHHHHSC
T ss_pred HHHHH---HHHHHHHcCCCC-cccCCCHHHHHHHhCHHHHHHHHHHhhcc
Confidence 99999 8888986 5555 67889999999999999999999999753
No 9
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=100.00 E-value=5.5e-71 Score=572.16 Aligned_cols=282 Identities=22% Similarity=0.342 Sum_probs=235.7
Q ss_pred hhhcccCCCCceeeccccc-------CCCccccc--cCchHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEecc
Q 012478 47 LLLNTATNPGTINRTRVYR-------KNSTGVEA--CLSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSG 117 (462)
Q Consensus 47 ~~~~~~~~Pr~~~~~R~y~-------rgs~~~~~--a~~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG 117 (462)
-+++||++|||+|++|+|+ |||++++| ++.++++||+||++++++++|||||++||++++++||++||+||
T Consensus 10 ~~~~w~~~~r~~~~~r~yta~~v~~~rgs~~~~~~~~~~~a~~lr~Ll~~~~~l~~~ga~D~~sA~~~~~aGf~Aiy~SG 89 (433)
T 3eol_A 10 SLIPSAPKGRFDGIERAHTAEDVKRLRGSVEIKYSLAEMGANRLWKLIHEEDFVNALGALSGNQAMQMVRAGLKAIYLSG 89 (433)
T ss_dssp TTSTTCCTTTTTTCCCSSCHHHHHHHHCSCCCCCHHHHHHHHHHHHHHHHSSCEEEEBCSSHHHHHHHHHTTCCCEEEC-
T ss_pred eehhcccCccccCCcCCCCHHHHHHhcCCCccCCchHHHHHHHHHHHhccCCCEEeCCCCcHHHHHHHHHhCCCEEEech
Confidence 3689999999999999998 99999999 67889999999999999999999999999999999999999999
Q ss_pred HHHHhh----hccCCCCCCCCHHHHHHHHHHHHhhc-------------------CCcEEEeCCCCCCCHHHHHHHHHHH
Q 012478 118 FSISAA----RLALPDTGFISYGEMVDQGQLITQAV-------------------SIPVIGDGDNGYGNAMNVKRTVKGY 174 (462)
Q Consensus 118 ~avSas----~lG~PD~g~vsl~Eml~~~~~I~ra~-------------------~iPVIaD~DtGyG~~~nv~rtVk~l 174 (462)
|++|++ .+|+||.++++++||++++++|++++ .+|||||+|+|||++.||+++||+|
T Consensus 90 ~~vAa~~~~~~~G~PD~~~~~~~ev~~~v~rI~~a~~~~d~~~~~~~~~~~~~d~~lPIiaD~DtGfG~~~nv~rtVk~~ 169 (433)
T 3eol_A 90 WQVAADANTASAMYPDQSLYPANAGPELAKRINRTLQRADQIETAEGKGLSVDTWFAPIVADAEAGFGDPLDAFEIMKAY 169 (433)
T ss_dssp ----------------------CHHHHHHHHHHHHHHHHHHHHHHTTSCCSSSCSCCCEEEECC---CCHHHHHHHHHHH
T ss_pred HHHHhccchhcCCCCCCccCCHHHHHHHHHHHHHHHHHhhhhhhhhcccccccCCCCCeEEECCCCCCCcHHHHHHHHHH
Confidence 999874 58999999999999999999999875 6999999999999999999999999
Q ss_pred HHhCccEEEeCCCCC-CCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhc-----------------
Q 012478 175 IKAGFAGIILEDQVS-PKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA----------------- 236 (462)
Q Consensus 175 ~~AGaaGI~IEDq~~-PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~----------------- 236 (462)
+++||+|||||||+. ||||||++||+|+|.+||++||+||++|++.+|+||+|+||||++++
T Consensus 170 ~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~g~d~vIiARTDA~~a~l~~s~~d~rd~~fl~g 249 (433)
T 3eol_A 170 IEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMGTPTLIVARTDAEAAKLLTSDIDERDQPFVDY 249 (433)
T ss_dssp HHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCSTTTGGGBCS
T ss_pred HHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCEEEEEEcCCccccccccCcccccccceec
Confidence 999999999999996 99999999999999999999999999999988899999999999653
Q ss_pred -------------ccHHHHHHHHHHhHhcCCcEEEecCC-CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCC-------
Q 012478 237 -------------LSLEESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMANMLEGGGKTPILN------- 295 (462)
Q Consensus 237 -------------~gldeAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls------- 295 (462)
.++|+||+||++|++ |||+||+|.. ++.+++++|++.++. |.|+|++.. +.+|.++
T Consensus 250 ~g~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~If~e~~~~~~eei~~f~~~v~~-~~P~~~L~~-~~sPsfnw~~~~~~ 326 (433)
T 3eol_A 250 EAGRTAEGFYQVKNGIEPCIARAIAYAP-YCDLIWMETSKPDLAQARRFAEAVHK-AHPGKLLAY-NCSPSFNWKKNLDD 326 (433)
T ss_dssp SSCBCTTCCEEBCCSHHHHHHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHH-HSTTCCEEE-ECCSSSCHHHHSCH
T ss_pred cCcccccccccccCCHHHHHHHHHHHHh-cCCEEEEeCCCCCHHHHHHHHHHhcc-cCCCccccc-CCCCCCcccccCCh
Confidence 689999999999999 9999999875 799999999998752 456888876 5688887
Q ss_pred ------HHHHHhcCCCEEeccchHHHHHHHHHHHHHHHHHcC
Q 012478 296 ------PLELEELGFKLVAYPLSLIGVSVRAMQDALTAIKGG 331 (462)
Q Consensus 296 ------~~eL~~lGv~~V~yp~~ll~aa~~Am~~~l~~l~~g 331 (462)
.+||+++||++++||++++++++.||.++++.|++.
T Consensus 327 ~~~~~f~~eLa~lGv~~v~~~~a~~raa~~A~~~~a~~i~~~ 368 (433)
T 3eol_A 327 ATIAKFQRELGAMGYKFQFITLAGFHQLNYGMFELARGYKDR 368 (433)
T ss_dssp HHHHHHHHHHHHHTEEEEEETTHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhHHHHHHHHcCCeEEEeCcHHHHHHHHHHHHHHHHHHHc
Confidence 799999999999999999999999999999999863
No 10
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=100.00 E-value=1.4e-70 Score=568.42 Aligned_cols=291 Identities=26% Similarity=0.357 Sum_probs=272.1
Q ss_pred eeeeccchhhhhhcccCCCCceeeccccc-------CCCccccc--cCchHHHHHHHHhC---CCceEecccCChHHHHH
Q 012478 37 ISFNKTNTNTLLLNTATNPGTINRTRVYR-------KNSTGVEA--CLSPAKSLRQILEL---PGVHQGPACFDALSAKL 104 (462)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~Pr~~~~~R~y~-------rgs~~~~~--a~~~a~~LR~ll~~---~~~iv~p~ayDalSArl 104 (462)
|+.+|+++.+.+++||++|||+|++|+|+ |||++++| +..++++||+||++ ++++.+|||||++||++
T Consensus 1 ~~~~~~~~~~~~~~~w~~~r~~~~~r~yta~~v~~~rgs~~~~~~~a~~~a~~Lr~ll~~~~~~~~~~~~Ga~d~~sA~~ 80 (435)
T 3lg3_A 1 MTISRTQQIQQLEQEWTSPRWKNITRPYSAEDVIKLRGSVNPECTFAQNGAKKLWELLHGGSRKGYINCLGALTGGQALQ 80 (435)
T ss_dssp CCCCHHHHHHHHHHHTTSGGGTTCCCSSCHHHHHHTTCSCCCCCHHHHHHHHHHHHHHTTTSSSSSEEEEBCCSHHHHHH
T ss_pred CCcchHHHHHHHHHhhcChhhcCCCCCCCHHHHHHhCCCCCCcCchHHHHHHHHHHHHHhhccCCcEEeCCCCcHHHHHH
Confidence 57788889999999999999999999998 99999999 56789999999998 88999999999999999
Q ss_pred HHHhCCcEEEeccHHHHh----hhccCCCCCCCCHHHHHHHHHHHHhhc---C-------------------CcEEEeCC
Q 012478 105 VEKSGFSFCFTSGFSISA----ARLALPDTGFISYGEMVDQGQLITQAV---S-------------------IPVIGDGD 158 (462)
Q Consensus 105 ~e~aGfdaI~vSG~avSa----s~lG~PD~g~vsl~Eml~~~~~I~ra~---~-------------------iPVIaD~D 158 (462)
++++||++||+|||++|+ +.+|+||.++++++||++++++|++++ + +||+||+|
T Consensus 81 ~~~aGf~Aiy~SG~~vAa~~~~s~~G~PD~gl~~~~ev~~~v~rI~~a~~~~d~~~~~~~~~~~~~~~~d~~lPviaD~D 160 (435)
T 3lg3_A 81 QAKAGVEAIYMSGWQVAADANTASSMYPDQSLYPVDSVPAVVKRINNSFRRADQIQWSNNIEPGSKGYTDYFLPIVADAE 160 (435)
T ss_dssp HHHHTCCSEEECHHHHHHHCCTTCSCCCSSSCSCTTHHHHHHHHHHHHHHHHHHHHHHTTCCTTSTTCCCCCCCEEEECT
T ss_pred HHHcCCCEEEechHHHhcccchhccCCCCcCcCcHHHHHHHHHHHHHHHHhhhhhhhhccccccccccccCCCCeEEECC
Confidence 999999999999999997 368999999999999999999998864 2 99999999
Q ss_pred CCCCCHHHHHHHHHHHHHhCccEEEeCCCCC-CCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhc-
Q 012478 159 NGYGNAMNVKRTVKGYIKAGFAGIILEDQVS-PKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA- 236 (462)
Q Consensus 159 tGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~-PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~- 236 (462)
+|||++.|++++|++|+++||+|||||||+. ||||||++||+|+|.+||++||+||++|++.+|+||+|+||||++++
T Consensus 161 tGyG~~~~v~~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~~~~d~~IiARTDa~aa~ 240 (435)
T 3lg3_A 161 AGFGGVLNAFELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLAADVLGVPTLLIARTDADAAD 240 (435)
T ss_dssp TCSSSHHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCC
T ss_pred CCCCCcHHHHHHHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCCcccc
Confidence 9999999999999999999999999999996 99999999999999999999999999999888899999999998653
Q ss_pred ---------------------------ccHHHHHHHHHHhHhcCCcEEEecCC-CCHHHHHHHHHhCCCCceeeeeeecC
Q 012478 237 ---------------------------LSLEESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMANMLEGG 288 (462)
Q Consensus 237 ---------------------------~gldeAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N~l~~~ 288 (462)
.++|+||+||++|++ |||+||+|.. ++.+++++|++.++. |.|.|++..
T Consensus 241 l~~s~~d~rD~~fi~G~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~if~E~~~~~~~ei~~f~~~v~~-~~P~~~La~- 317 (435)
T 3lg3_A 241 LLTSDCDPYDREFITGDRTAEGFFRTRAGIEQAISRGLAYAP-YADLVWCETSTPDLALAKRFADAVHA-QFPGKLLAY- 317 (435)
T ss_dssp EESCCCCGGGGGGEEEEECTTCCEEECCSHHHHHHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHH-HSTTCEEEE-
T ss_pred ccccccccccchhhcccccccccccccCCHHHHHHHHHHHHc-cCCEEEecCCCCCHHHHHHHHHHhcc-ccCCeEEEe-
Confidence 689999999999999 9999999764 799999999998763 467888886
Q ss_pred CCCCCCC-------------HHHHHhcCCCEEeccchHHHHHHHHHHHHHHHHHc
Q 012478 289 GKTPILN-------------PLELEELGFKLVAYPLSLIGVSVRAMQDALTAIKG 330 (462)
Q Consensus 289 g~tP~ls-------------~~eL~~lGv~~V~yp~~ll~aa~~Am~~~l~~l~~ 330 (462)
+.+|.++ .+||+++||++++||+++++++..||.+.++.+++
T Consensus 318 ~~sPsfnw~~~~~d~~~~~f~~eLa~lG~~~v~~~la~~raa~~a~~~~a~~~~~ 372 (435)
T 3lg3_A 318 NCSPSFNWKKNLTDQQIASFQDELSAMGYKYQFITLAGIHSMWFNMFDLAHAYAQ 372 (435)
T ss_dssp ECCSSSCHHHHSCHHHHHHHHHHHHHTTEEEEEETTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCccccccCCHHHHHHHHHHHHHcCCcEEEeCcHHHHHHHHHHHHHHHHHHh
Confidence 6789887 89999999999999999999999999999999987
No 11
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=100.00 E-value=1.3e-69 Score=562.18 Aligned_cols=289 Identities=25% Similarity=0.335 Sum_probs=268.7
Q ss_pred eccchhhhhhccc-CCCCceeeccccc-------CCCccccc--cCchHHHHHHHHhCCCceEecccCChHHHHHHHHhC
Q 012478 40 NKTNTNTLLLNTA-TNPGTINRTRVYR-------KNSTGVEA--CLSPAKSLRQILELPGVHQGPACFDALSAKLVEKSG 109 (462)
Q Consensus 40 ~~~~~~~~~~~~~-~~Pr~~~~~R~y~-------rgs~~~~~--a~~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aG 109 (462)
+|+++.+.+++|| ++|||++|+|+|+ ||+++++| ++.++++||++|++++++++|||||++||++++++|
T Consensus 6 ~~~~~~~~~~~~w~~~~r~~~i~r~Yta~~v~~lrg~~~~~~~~a~~~a~~Lr~ll~~~~~l~~~Ga~D~~sA~~~~~aG 85 (439)
T 3i4e_A 6 SRQQQAQELQKQWETDPRWKGIKRAFTAEDVVRLRGSIQQEHTLAKRGAEKLWTLINNEPFVNALGALTGNQAMQQVKAG 85 (439)
T ss_dssp CHHHHHHHHHHHHHHCGGGTTCCCSSCHHHHHHHHCSSCCCCHHHHHHHHHHHHHHHHSSCEEEEBCCSHHHHHHHHHHT
T ss_pred chHHHHHHHHHHhhcCCCcCCccCCCCHHHHHHHcCCCcccCchHHHHHHHHHHHHhcCCCEEeCCCCCHHHHHHHHHhC
Confidence 5677777788888 9999999999998 99999999 678899999999999999999999999999999999
Q ss_pred CcEEEeccHHHHh----hhccCCCCCCCCHHHHHHHHHHHHhh--------------------cC--CcEEEeCCCCCCC
Q 012478 110 FSFCFTSGFSISA----ARLALPDTGFISYGEMVDQGQLITQA--------------------VS--IPVIGDGDNGYGN 163 (462)
Q Consensus 110 fdaI~vSG~avSa----s~lG~PD~g~vsl~Eml~~~~~I~ra--------------------~~--iPVIaD~DtGyG~ 163 (462)
|++||+|||++|+ +.+|+||.++++++||++.+++|+++ ++ +|||||+|+|||+
T Consensus 86 f~Aiy~SG~~vAa~~~~s~~G~PD~~~~~~~ev~~~v~rI~~a~~~ad~i~~~~~~~~~~~~~~d~~~PviaD~dtGfG~ 165 (439)
T 3i4e_A 86 LKAIYLSGWQVAGDANVAGEMYPDQSLYPANSVPLVVKRINNTLTRADQIQWSEGKNPGDEGYVDFFAPIVADAEAGFGG 165 (439)
T ss_dssp CSCEEECHHHHHHHTCTTCCCCCSSSCSCTTHHHHHHHHHHHHHHHHHHHHHHTTCCTTSTTCCCCCCCEEEECTTTTSS
T ss_pred CCEEEechHHHhcccccccCCCCCcccCCHHHHHHHHHHHHHHHHHhHhhhhhhccccccccccCCCCCeEEECCCCCCc
Confidence 9999999999997 36899999999999999999999886 34 9999999999999
Q ss_pred HHHHHHHHHHHHHhCccEEEeCCCCC-CCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhc------
Q 012478 164 AMNVKRTVKGYIKAGFAGIILEDQVS-PKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA------ 236 (462)
Q Consensus 164 ~~nv~rtVk~l~~AGaaGI~IEDq~~-PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~------ 236 (462)
+.|++++|++|+++||+|||||||+. ||||||++||+|+|.+|+++||+||++|++.+|+||+|+||||++++
T Consensus 166 ~~~v~~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~d~~IiARTDa~~a~l~~s~ 245 (439)
T 3i4e_A 166 VLNAFELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMGTPTVLVARTDAEAADLITSD 245 (439)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCC
T ss_pred cHHHHHHHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCcccccccccc
Confidence 99999999999999999999999995 99999999999999999999999999999888999999999999753
Q ss_pred ----------------------ccHHHHHHHHHHhHhcCCcEEEecC-CCCHHHHHHHHHhCCCCceeeeeeecCCCCCC
Q 012478 237 ----------------------LSLEESLRRSRAFADAGADVLFIDA-LASKEEMKAFCEISPLVPKMANMLEGGGKTPI 293 (462)
Q Consensus 237 ----------------------~gldeAI~RakAy~eAGAD~Ifie~-~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ 293 (462)
.++|+||+||++|++ |||+||+|. +++.+++++|++.++. |.|+|++.. +++|.
T Consensus 246 ~d~~d~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~-GAD~if~E~~~~~~eei~~f~~~v~~-~~P~~~l~~-~~sPs 322 (439)
T 3i4e_A 246 IDDNDKPYLTGERTVEGFFRTKPGLEQAISRGLAYAP-YADLIWCETGKPDLEYAKKFAEAIHK-QFPGKLLSY-NCSPS 322 (439)
T ss_dssp CCTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHTT-TCSEEEECCSSCCHHHHHHHHHHHHH-HSTTCEEEE-ECCSS
T ss_pred cccccchhhcccCcccccccccCCHHHHHHHHHHHHh-hCCEEEecCCCCCHHHHHHHHHHhcc-cCCceEEee-CCCCC
Confidence 579999999999999 999999975 6899999999998763 466788876 67898
Q ss_pred CC-------------HHHHHhcCCCEEeccchHHHHHHHHHHHHHHHHHcC
Q 012478 294 LN-------------PLELEELGFKLVAYPLSLIGVSVRAMQDALTAIKGG 331 (462)
Q Consensus 294 ls-------------~~eL~~lGv~~V~yp~~ll~aa~~Am~~~l~~l~~g 331 (462)
++ .+||+++||++++||++++++++.||.+.++.|++.
T Consensus 323 fnw~~~~~~~~~~~f~~eL~~lGv~~v~~~la~~raa~~A~~~~a~~i~~~ 373 (439)
T 3i4e_A 323 FNWKKNLDDATIAKFQKELGAMGYKFQFITLAGFHALNYSMFNLAHGYART 373 (439)
T ss_dssp SCHHHHSCHHHHHTHHHHHHHHTCCEEEETTHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCcccCCHHHHHHHHHHHHHcCCeEEEeChHHHHHHHHHHHHHHHHHHHh
Confidence 88 889999999999999999999999999999999863
No 12
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=100.00 E-value=2.2e-68 Score=531.87 Aligned_cols=282 Identities=26% Similarity=0.398 Sum_probs=231.5
Q ss_pred CchHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEE
Q 012478 75 LSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVI 154 (462)
Q Consensus 75 ~~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVI 154 (462)
+.++++||++|++++++++|||||++||++++++|||+||+||+++++ ++|+||++.+|++||++|+++|++++++|||
T Consensus 5 ~~~~~~lr~l~~~~~~i~~~~a~D~~sA~~~~~aG~~ai~vsg~~~a~-~lG~pD~~~vt~~em~~~~~~I~~~~~~Pvi 83 (295)
T 1s2w_A 5 VKKTTQLKQMLNSKDLEFIMEAHNGLSARIVQEAGFKGIWGSGLSVSA-QLGVRDSNEASWTQVVEVLEFMSDASDVPIL 83 (295)
T ss_dssp CCHHHHHHHHHHSSSCEEEEEECSHHHHHHHHHHTCSCEEECCHHHHH-TC---------CHHHHHHHHHHHHTCSSCEE
T ss_pred hhHHHHHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEeChHHHHH-hCCCCCCCCCCHHHHHHHHHHHHhcCCCCEE
Confidence 567889999999999999999999999999999999999999999986 6999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCC--CcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecc
Q 012478 155 GDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRG--RKVVSREEAVMRIKAAVDARKESGSDIVIVARTD 232 (462)
Q Consensus 155 aD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~g--k~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTD 232 (462)
+|+|+|||++.++.+++++|+++||+|||||||.+||+|||++| |+|+|++|+++||+|+++|+. +++|+|+||||
T Consensus 84 aD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~--~~~~~i~aRtd 161 (295)
T 1s2w_A 84 LDADTGYGNFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQT--DPDFCIVARVE 161 (295)
T ss_dssp EECCSSCSSHHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCS--STTCEEEEEEC
T ss_pred ecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcc--cCCcEEEEeeh
Confidence 99999999999999999999999999999999999999999986 999999999999999999986 47999999999
Q ss_pred hh-hcccHHHHHHHHHHhHhcCCcEEEecC-CCCHHHHHHHHHhCCC-CceeeeeeecCCCCCCCCHHHHHhcCCCEEec
Q 012478 233 SR-QALSLEESLRRSRAFADAGADVLFIDA-LASKEEMKAFCEISPL-VPKMANMLEGGGKTPILNPLELEELGFKLVAY 309 (462)
Q Consensus 233 A~-~~~gldeAI~RakAy~eAGAD~Ifie~-~~s~eei~~i~~~v~~-vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~y 309 (462)
+. +..+++++|+||++|++||||+||+|+ +++.+++++|++.++. +|+++|+.++ + ..+.+||+++||++|+|
T Consensus 162 a~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~~~P~i~~~~~~-~---~~~~~eL~~lGv~~v~~ 237 (295)
T 1s2w_A 162 AFIAGWGLDEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWNNQGPVVIVPTKY-Y---KTPTDHFRDMGVSMVIW 237 (295)
T ss_dssp TTTTTCCHHHHHHHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHTTCSCEEECCSTT-T---TSCHHHHHHHTCCEEEE
T ss_pred HHhccccHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcCCCCCEEEeCCCC-C---CCCHHHHHHcCCcEEEE
Confidence 98 678899999999999999999999997 7888999999999863 6888886654 2 34799999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHc-CCCC-CCCCCCCHHHHHHhcCcccHHHHHHhhcc
Q 012478 310 PLSLIGVSVRAMQDALTAIKG-GRIP-SPGSMPSFQEIKETLGFNTYYEEEKRYAT 363 (462)
Q Consensus 310 p~~ll~aa~~Am~~~l~~l~~-g~~~-~~~~~~s~~e~~~lvg~~~~~~~e~~y~~ 363 (462)
|++++++++.||+++++.|++ |+.. ..+.+++++|+++++||++|+++|++|.+
T Consensus 238 ~~~~~raa~~a~~~~~~~i~~~g~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 293 (295)
T 1s2w_A 238 ANHNLRASVSAIQQTTKQIYDDQSLVNVEDKIVSVKEIFRLQRDDELVQAEDKYLP 293 (295)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHSSSTTTGGGSCCHHHHHHC---------------
T ss_pred ChHHHHHHHHHHHHHHHHHHHcCCccchhhcCCCHHHHHHhcCHHHHHHHHHhhcc
Confidence 999999999999999999986 5443 35678899999999999999999999964
No 13
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=100.00 E-value=1.6e-68 Score=553.97 Aligned_cols=284 Identities=25% Similarity=0.339 Sum_probs=261.4
Q ss_pred hhhhhcccC-CCCceeeccccc-------CCCccccc--cCchHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEE
Q 012478 45 NTLLLNTAT-NPGTINRTRVYR-------KNSTGVEA--CLSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCF 114 (462)
Q Consensus 45 ~~~~~~~~~-~Pr~~~~~R~y~-------rgs~~~~~--a~~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~ 114 (462)
.+.+++||. +|||++|+|+|+ |||+.+.| +...+++||++|++++++++|||||++||++++++||++||
T Consensus 11 ~~~~~~~w~~~~r~~~i~r~yt~~~v~~lr~s~~~~~~~~~~~a~~lr~lL~~~~~~~~~ga~d~~sA~~~~~aGf~Aiy 90 (429)
T 1f8m_A 11 AEQIQQEWDTNPRWKDVTRTYSAEDVVALQGSVVEEHTLARRGAEVLWEQLHDLEWVNALGALTGNMAVQQVRAGLKAIY 90 (429)
T ss_dssp HHHHHHHHHHCGGGTTCCCSSCHHHHHHHSTTCCCCCHHHHHHHHHHHHHHHHSSCEEEEBCCSHHHHHHHHHTTCSCEE
T ss_pred HHHHHHHhccCCCcCceeCCCCHHHHHHHhCCccccCchHHHHHHHHHHHHhcCCceecCCCCCHHHHHHHHHcCCCEEE
Confidence 345666666 999999999998 99999998 67889999999999999999999999999999999999999
Q ss_pred eccHHHHh----hhccCCCCCCCCHHHHHHHHHHHHhhc----------------C--CcEEEeCCCCCCCHHHHHHHHH
Q 012478 115 TSGFSISA----ARLALPDTGFISYGEMVDQGQLITQAV----------------S--IPVIGDGDNGYGNAMNVKRTVK 172 (462)
Q Consensus 115 vSG~avSa----s~lG~PD~g~vsl~Eml~~~~~I~ra~----------------~--iPVIaD~DtGyG~~~nv~rtVk 172 (462)
+|||++|+ +.+|+||.++++++||++++++|++++ + +|||||+|+|||++.||+++||
T Consensus 91 ~SG~~vAa~~~~s~~G~PD~~~~~~~ev~~~v~~I~~a~~~~d~~~~~~~~~~~~d~~~PIiaD~DtGfG~~~nv~~tvk 170 (429)
T 1f8m_A 91 LSGWQVAGDANLSGHTYPDQSLYPANSVPQVVRRINNALQRADQIAKIEGDTSVENWLAPIVADGEAGFGGALNVYELQK 170 (429)
T ss_dssp ECHHHHHHHCCTTCCCCCSSSCSCTTHHHHHHHHHHHHHHHHHHHHHHHTCCSCSCSSCCEEEECTTTTSSHHHHHHHHH
T ss_pred echHHHhcccccccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHhhccCccccCCCCEEEECCCCCCCcHHHHHHHH
Confidence 99999997 478999999999999999999999986 4 9999999999999999999999
Q ss_pred HHHHhCccEEEeCCCC-CCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhc---------------
Q 012478 173 GYIKAGFAGIILEDQV-SPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA--------------- 236 (462)
Q Consensus 173 ~l~~AGaaGI~IEDq~-~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~--------------- 236 (462)
+|+++||+|||||||+ .||||||++||+|+|.+||++||+||++|++++|+||+|+||||++++
T Consensus 171 ~~i~AGaaGi~IEDq~~~~KkCGH~~gk~lvp~~e~v~rI~AAr~A~~~~g~d~vIiARTDa~~a~li~s~~d~~d~~fl 250 (429)
T 1f8m_A 171 ALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADVPTVVIARTDAEAATLITSDVDERDQPFI 250 (429)
T ss_dssp HHHHTTCSEEEEECBCGGGCCCTTSSCCEECCHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTTCCEESCCCSTTTGGGE
T ss_pred HHHHcCCEEEEEecCCCccccccCCCCCeeeCHHHHHHHHHHHHHHHHhcCCCEEEEEEechhhhccccccccccccccc
Confidence 9999999999999999 699999999999999999999999999999988999999999999763
Q ss_pred -------------ccHHHHHHHHHHhHhcCCcEEEecC-CCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCC-------
Q 012478 237 -------------LSLEESLRRSRAFADAGADVLFIDA-LASKEEMKAFCEISPLVPKMANMLEGGGKTPILN------- 295 (462)
Q Consensus 237 -------------~gldeAI~RakAy~eAGAD~Ifie~-~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls------- 295 (462)
.++|+||+||++|++ |||+||+|+ +++.+++++|++.++. ..|.|++.. +.+|.++
T Consensus 251 ~g~~~~eg~y~~~~gld~AI~Ra~AYa~-gAD~if~e~~~~~~eei~~f~~~v~~-~~P~~~La~-n~sPsf~w~~~~~~ 327 (429)
T 1f8m_A 251 TGERTREGFYRTKNGIEPCIARAKAYAP-FADLIWMETGTPDLEAARQFSEAVKA-EYPDQMLAY-NCSPSFNWKKHLDD 327 (429)
T ss_dssp EEEECTTSCEEECCSHHHHHHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHT-TCTTCEEEE-ECCTTSCHHHHCCH
T ss_pred cCCCCcccccccccCHHHHHHHHHHHHh-cCCEEEeCCCCCCHHHHHHHHHHhcc-cCCCceeec-CCCCCCCcccccch
Confidence 689999999999999 999999995 8999999999998763 123455554 4588899
Q ss_pred ------HHHHHhcCCCEEeccchHHHHHHHHHHHHHHHHHcC
Q 012478 296 ------PLELEELGFKLVAYPLSLIGVSVRAMQDALTAIKGG 331 (462)
Q Consensus 296 ------~~eL~~lGv~~V~yp~~ll~aa~~Am~~~l~~l~~g 331 (462)
.+||+++||++++||++++++++.||.++++.|++.
T Consensus 328 ~~~~~f~~eL~~lG~~~v~~~l~~~raa~~a~~~~a~~~~~~ 369 (429)
T 1f8m_A 328 ATIAKFQKELAAMGFKFQFITLAGFHALNYSMFDLAYGYAQN 369 (429)
T ss_dssp HHHHHHHHHHHHHTEEEEEETTHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHhHHHHHHHHcCCeEEEECcHHHHHHHHHHHHHHHHHHHc
Confidence 799999999999999999999999999999999873
No 14
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=100.00 E-value=5.2e-61 Score=474.59 Aligned_cols=260 Identities=28% Similarity=0.376 Sum_probs=237.0
Q ss_pred chHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEE
Q 012478 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIG 155 (462)
Q Consensus 76 ~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIa 155 (462)
.++++||++|++ + +++|||||++||++++++|||+||+||+++++ ++|+||++.+|++||++|+++|++++++|||+
T Consensus 5 ~~~~~lr~l~~~-~-i~~~~a~D~~sA~~~~~aG~~ai~vsg~s~a~-~~G~pD~~~vt~~em~~~~~~I~~~~~~pvia 81 (275)
T 2ze3_A 5 DHARSFHALHQT-G-FLLPNAWDVASARLLEAAGFTAIGTTSAGIAH-ARGRTDGQTLTRDEMGREVEAIVRAVAIPVNA 81 (275)
T ss_dssp HHHHHHHHHHHH-C-EEECEESSHHHHHHHHHHTCSCEEECHHHHHH-HSCCCSSSSSCHHHHHHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHhhC-C-eeEecccCHHHHHHHHHcCCCEEEECcHHHHH-hCCCCCCCCCCHHHHHHHHHHHHhhcCCCEEe
Confidence 467899999986 6 99999999999999999999999999999986 69999999999999999999999999999999
Q ss_pred eCCCCCC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchh
Q 012478 156 DGDNGYG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSR 234 (462)
Q Consensus 156 D~DtGyG-~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~ 234 (462)
|+|+||| +++|+.+++++|+++||+|||||||.+ | .||+|+|.+|+++||+|++++++++|.+|+|+||||++
T Consensus 82 D~d~Gyg~~~~~~~~~v~~l~~aGaagv~iED~~~-----~-~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~ 155 (275)
T 2ze3_A 82 DIEAGYGHAPEDVRRTVEHFAALGVAGVNLEDATG-----L-TPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTF 155 (275)
T ss_dssp ECTTCSSSSHHHHHHHHHHHHHTTCSEEEEECBCS-----S-SSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTT
T ss_pred ecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCcC-----C-CCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhh
Confidence 9999999 689999999999999999999999974 5 67999999999999999999999888999999999997
Q ss_pred hc-------ccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEE
Q 012478 235 QA-------LSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLV 307 (462)
Q Consensus 235 ~~-------~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V 307 (462)
.. .+++++|+||++|++||||+||+|++++.+++++|++.++ +| +|++.+ +|.++.+||+++||++|
T Consensus 156 ~~~~g~~~~~~~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~-~P--~n~~~~---~~~~~~~eL~~lGv~~v 229 (275)
T 2ze3_A 156 LKGHGATDEERLAETVRRGQAYADAGADGIFVPLALQSQDIRALADALR-VP--LNVMAF---PGSPVPRALLDAGAARV 229 (275)
T ss_dssp TTTCSSSHHHHHHHHHHHHHHHHHTTCSEEECTTCCCHHHHHHHHHHCS-SC--EEEECC---TTSCCHHHHHHTTCSEE
T ss_pred hccccccchhhHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhcC-CC--EEEecC---CCCCCHHHHHHcCCcEE
Confidence 54 3799999999999999999999999999999999999986 56 577754 46789999999999999
Q ss_pred eccchHHHHHHHHHHHHHHHHHcCCCCCCCC--CCCHHHHHHhcC
Q 012478 308 AYPLSLIGVSVRAMQDALTAIKGGRIPSPGS--MPSFQEIKETLG 350 (462)
Q Consensus 308 ~yp~~ll~aa~~Am~~~l~~l~~g~~~~~~~--~~s~~e~~~lvg 350 (462)
+||++++++++.||++++++|++.+...... |++|+|+++++|
T Consensus 230 ~~~~~~~raa~~a~~~~~~~i~~~g~~~~~~~~~~~~~e~~~l~~ 274 (275)
T 2ze3_A 230 SFGQSLMLATLGLVQRMAAELHAAEQSPLMDSYFLGFGEGHDLFH 274 (275)
T ss_dssp ECTTHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHCHHHHHHHH
T ss_pred EEChHHHHHHHHHHHHHHHHHHHhCCcccccccCCCHHHHHHHhc
Confidence 9999999999999999999998633433333 378899988875
No 15
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=100.00 E-value=1e-57 Score=446.68 Aligned_cols=241 Identities=26% Similarity=0.313 Sum_probs=222.1
Q ss_pred chHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEE
Q 012478 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIG 155 (462)
Q Consensus 76 ~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIa 155 (462)
.++++||++|++++++++|||||++||++++++|||+||+||+++++ ++|+||++.+|++||++|+++|++++++|||+
T Consensus 7 ~~~~~lr~l~~~~~~i~~~~ayD~~sA~~~~~aG~dai~vg~~s~a~-~~G~pD~~~vt~~em~~~~~~I~r~~~~pvia 85 (255)
T 2qiw_A 7 SLATKFASDHESGKLLVLPTVWDTWSAGLVEEAGFSGLTIGSHPVAD-ATGSSDGENMNFADYMAVVKKITSAVSIPVSV 85 (255)
T ss_dssp HHHHHHHHHHHTCCCEECCEESSHHHHHHHHHTTCSCEEECHHHHHH-HTTCCTTTCSCHHHHHHHHHHHHHHCSSCEEE
T ss_pred hHHHHHHHHHhCCCcEEEecCcCHHHHHHHHHcCCCEEEEChHHHHH-hCCCCCCCCcCHHHHHHHHHHHHhcCCCCEEe
Confidence 46788999999999999999999999999999999999999988886 69999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhh
Q 012478 156 DGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQ 235 (462)
Q Consensus 156 D~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~ 235 (462)
|+|+|||+.. .+++++|+++||+|||||||. |..+|+|+|.+|+++||+|++++++++|.+|+|+||||++.
T Consensus 86 D~~~Gyg~~~--~~~~~~l~~aGa~gv~iEd~~------~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~ 157 (255)
T 2qiw_A 86 DVESGYGLSP--ADLIAQILEAGAVGINVEDVV------HSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVK 157 (255)
T ss_dssp ECTTCTTCCH--HHHHHHHHHTTCCEEEECSEE------GGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHH
T ss_pred ccCCCcCcHH--HHHHHHHHHcCCcEEEECCCC------CCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhh
Confidence 9999999765 999999999999999999996 77889999999999999999999998889999999999962
Q ss_pred ------cccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEec
Q 012478 236 ------ALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAY 309 (462)
Q Consensus 236 ------~~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~y 309 (462)
.++++++|+||++|++||||+||+|++++.+++++|++.++ +|+.+++.++ ++||.++.+||+++||++|||
T Consensus 158 ~g~~~~~~~~~~ai~ra~a~~eAGAd~i~~e~~~~~~~~~~i~~~~~-~P~n~~~~~~-~~~p~~~~~eL~~lGv~~v~~ 235 (255)
T 2qiw_A 158 LGADVFEDPMVEAIKRIKLMEQAGARSVYPVGLSTAEQVERLVDAVS-VPVNITAHPV-DGHGAGDLATLAGLGVRRVTF 235 (255)
T ss_dssp HCTTTSSSHHHHHHHHHHHHHHHTCSEEEECCCCSHHHHHHHHTTCS-SCBEEECBTT-TBBTTBCHHHHHHTTCCEEEC
T ss_pred ccCCcchHHHHHHHHHHHHHHHcCCcEEEEcCCCCHHHHHHHHHhCC-CCEEEEecCC-CCCCCCCHHHHHHcCCCEEEE
Confidence 24699999999999999999999999999999999999987 5654333333 568999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHcC
Q 012478 310 PLSLIGVSVRAMQDALTAIKGG 331 (462)
Q Consensus 310 p~~ll~aa~~Am~~~l~~l~~g 331 (462)
|++ ++.||++++++|+++
T Consensus 236 ~~~----a~~a~~~~~~~i~~~ 253 (255)
T 2qiw_A 236 GPL----WQKWLAATSAQQLKG 253 (255)
T ss_dssp TTH----HHHHHHHHHHHHHGG
T ss_pred HHH----HHHHHHHHHHHHHhc
Confidence 999 999999999999874
No 16
>1dqu_A Isocitrate lyase; beta barrel; 2.80A {Emericella nidulans} SCOP: c.1.12.7
Probab=100.00 E-value=1.6e-60 Score=504.22 Aligned_cols=278 Identities=23% Similarity=0.259 Sum_probs=246.6
Q ss_pred hhhhhcccCCCCceeeccccc-------CCCccccc-cCchHHHHHHHHh----CCCceEecccCChHHHHHHHHhCCcE
Q 012478 45 NTLLLNTATNPGTINRTRVYR-------KNSTGVEA-CLSPAKSLRQILE----LPGVHQGPACFDALSAKLVEKSGFSF 112 (462)
Q Consensus 45 ~~~~~~~~~~Pr~~~~~R~y~-------rgs~~~~~-a~~~a~~LR~ll~----~~~~iv~p~ayDalSArl~e~aGfda 112 (462)
.+.+++||.+|||++|+|||+ |||++++| ++..+++||++|+ .++++++|||||++||++++ .||++
T Consensus 15 ~~~~~~~w~~~R~~~i~rpYta~~v~~~rGs~~~~~~~~~~a~kL~~~lr~l~~~~~~l~~pga~D~~sA~~~~-~gf~A 93 (538)
T 1dqu_A 15 VAAVKNWWKDSRWRYTKRPFTAEQIVAKRGNLKIEYPSNVQAKKLWGILERNFKNKEASFTYGCLDPTMVTQMA-KYLDT 93 (538)
T ss_dssp HHHHHHHHTSGGGGGCCCSSCHHHHHHHCCSSCCCCTHHHHHHHHHHHHHHHHHHTCCEEEEBCCSHHHHHHHH-HHCSC
T ss_pred HHHHHHHhcCccccCccCCCCHHHHHHHcCCCCCccchhHHHHHHHHHHHHhhccCCcEEecCCCCHHHHHHHH-hcCCe
Confidence 345789999999999999999 99999999 5555666655554 68899999999999999998 79999
Q ss_pred EEeccHHHHhhh----ccCCCCCCCCHHHHHHHHHHHHhh-------------------------cC--CcEEEeCCCCC
Q 012478 113 CFTSGFSISAAR----LALPDTGFISYGEMVDQGQLITQA-------------------------VS--IPVIGDGDNGY 161 (462)
Q Consensus 113 I~vSG~avSas~----lG~PD~g~vsl~Eml~~~~~I~ra-------------------------~~--iPVIaD~DtGy 161 (462)
||+|||++|++. +|+||.++++++||++++++|+++ ++ +|||||+|+||
T Consensus 94 iy~SG~~vAas~~~~~~G~PD~~~~~~~ev~~~v~~I~~a~~~~D~~q~~~r~~~~~~~~~~~~~~d~~lPIiaD~DtGf 173 (538)
T 1dqu_A 94 VYVSGWQSSSTASSTDEPSPDLADYPMNTVPNKVNHLWMAQLFHDRKQREERMTTPKDQRHKVANVDYLRPIIADADTGH 173 (538)
T ss_dssp EEECHHHHHHHCCTTCCCCSSCSCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHSSCHHHHTTSCCCCCCCCEEEECTTCS
T ss_pred eecccHHHHhhcccccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHhhhhccchhhhccccccCcCCceEEecCCcC
Confidence 999999998653 499999999999999999999988 77 99999999999
Q ss_pred CCHHHHHHHHHHHHHhCccEEEeCCCCC-CCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHH
Q 012478 162 GNAMNVKRTVKGYIKAGFAGIILEDQVS-PKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (462)
Q Consensus 162 G~~~nv~rtVk~l~~AGaaGI~IEDq~~-PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gld 240 (462)
|+++||+++||.|+++||+|||||||+. ||||||++||+|+|.+||++||+||++|++.+|+||+|+||||++.+.+++
T Consensus 174 G~~~nv~~tvk~~ieAGaAGihIEDQ~~~~KkCGH~~GK~Lvp~ee~v~rI~AAr~A~d~~g~d~vIiARTDA~~~~~l~ 253 (538)
T 1dqu_A 174 GGLTAVMKLTKLFVERGAAGIHIEDQAPGTKKCGHMAGKVLVPISEHINRLVAIRAQADIMGTDLLAIARTDSEAATLIT 253 (538)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEECSBCTTCC------CEEECCHHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGEEEES
T ss_pred CchHHHHHHHHHHHHcCCeEEEeeccCCCCCCcCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEeccccccCHH
Confidence 9999999999999999999999999995 999999999999999999999999999999889999999999999999999
Q ss_pred HHHH-HHHHhH--------hcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHh--cCC--
Q 012478 241 ESLR-RSRAFA--------DAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE--LGF-- 304 (462)
Q Consensus 241 eAI~-RakAy~--------eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~--lGv-- 304 (462)
++|+ |+++|. +||||+ |+++. .+.+++.+|++++. .++|++. .|....++|.+ .|+
T Consensus 254 ~aI~~R~~ay~~G~~~~~~~AGAD~-~~~~~~~G~~~~ei~~~~~~~~---~~~nl~~----~~e~~~~~l~~~~~g~~~ 325 (538)
T 1dqu_A 254 STIDHRDHPFIIGSTNPDIQPLNDL-MVMAEQAGKNGAELQAIEDEWL---AKAGLKL----FNDAVVDAINNSPLPNKK 325 (538)
T ss_dssp CTTCGGGGGGEEEECCTTSCCHHHH-HHHHHHSCCCSHHHHHHHHHHH---HHSCEEC----SHHHHHHHHHTSSCSCHH
T ss_pred HHHHHHHHHHHhcCCCCCCccchHH-HHHHHhcCCCHHHHHHHHHHhc---CCCceEe----cchHHHHHHHhcccCccH
Confidence 9999 999999 999999 88864 67799999999864 4567764 45667899988 888
Q ss_pred -CEEeccchHHHHHHHHHHHHHHHHHcC
Q 012478 305 -KLVAYPLSLIGVSVRAMQDALTAIKGG 331 (462)
Q Consensus 305 -~~V~yp~~ll~aa~~Am~~~l~~l~~g 331 (462)
++++|.+++.++++.+|+..++.|.+.
T Consensus 326 ~~~~~y~~~~~r~s~~~~r~~A~~i~g~ 353 (538)
T 1dqu_A 326 AAIEKYLTQSKGKSNLEARAIAKEIAGT 353 (538)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHhccccHHHHHHHHHHHcCC
Confidence 999999999999999999999999754
No 17
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=100.00 E-value=6.1e-40 Score=323.93 Aligned_cols=233 Identities=16% Similarity=0.239 Sum_probs=179.8
Q ss_pred chHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEec-cHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcC-CcE
Q 012478 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVS-IPV 153 (462)
Q Consensus 76 ~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vS-G~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~-iPV 153 (462)
....+||+++++++++++|||||+.||++++++|||+|+++ |++ ++++|+||++.+|++||++|+++|+++++ +||
T Consensus 16 ~t~~~lr~~~~~g~~i~m~tayDa~sA~l~e~aG~d~ilvGdSl~--~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~v 93 (275)
T 3vav_A 16 VTVPKLQAMREAGEKIAMLTCYDASFAALLDRANVDVQLIGDSLG--NVLQGQTTTLPVTLDDIAYHTACVARAQPRALI 93 (275)
T ss_dssp CCHHHHHHHHHHTCCEEEEECCSHHHHHHHHHTTCSEEEECTTHH--HHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEE
T ss_pred cCHHHHHHHHHCCCcEEEEeCcCHHHHHHHHHcCCCEEEECcHHH--HHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCE
Confidence 34678999999999999999999999999999999999887 544 45799999999999999999999999995 999
Q ss_pred EEeCCCC-CCCHHHHHHHHHHHHHhCccEEEeCCCCCC------------CCCCCCCCCcccCHHHHHHHHHHHHHHHHh
Q 012478 154 IGDGDNG-YGNAMNVKRTVKGYIKAGFAGIILEDQVSP------------KGCGHTRGRKVVSREEAVMRIKAAVDARKE 220 (462)
Q Consensus 154 IaD~DtG-yG~~~nv~rtVk~l~~AGaaGI~IEDq~~P------------KrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~ 220 (462)
++|+|+| |++++++.+++++++++||+|||||||..+ |+|||++ ++|+.+. .
T Consensus 94 vaD~pfgsY~s~~~a~~~a~rl~kaGa~aVklEdg~~~~~~i~~l~~~GIpv~gHlg---ltPq~~~------------~ 158 (275)
T 3vav_A 94 VADLPFGTYGTPADAFASAVKLMRAGAQMVKFEGGEWLAETVRFLVERAVPVCAHVG---LTPQSVH------------A 158 (275)
T ss_dssp EEECCTTSCSSHHHHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHTTCCEEEEEE---SCGGGHH------------H
T ss_pred EEecCCCCCCCHHHHHHHHHHHHHcCCCEEEECCchhHHHHHHHHHHCCCCEEEecC---CCceEEe------------c
Confidence 9999996 999999999999999999999999999887 9999987 4555421 1
Q ss_pred hCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCC-C--CCCHH
Q 012478 221 SGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKT-P--ILNPL 297 (462)
Q Consensus 221 ~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~t-P--~ls~~ 297 (462)
+ ++|+|++|||+.+ +++|+||++|++||||+||+|++++. ++++|++.++ +|++ -+.. |.. . .|=..
T Consensus 159 ~-gg~~vqgrt~~~a----~~~i~rA~a~~eAGA~~ivlE~vp~~-~a~~It~~l~-iP~i--gIGa-G~~cdgQvLv~~ 228 (275)
T 3vav_A 159 F-GGFKVQGKTEAGA----AQLLRDARAVEEAGAQLIVLEAVPTL-VAAEVTRELS-IPTI--GIGA-GAECSGQVLVLH 228 (275)
T ss_dssp H-C---CCCCSHHHH----HHHHHHHHHHHHHTCSEEEEESCCHH-HHHHHHHHCS-SCEE--EESS-CSCSSEEEECHH
T ss_pred c-CCeEEEcCCHHHH----HHHHHHHHHHHHcCCCEEEecCCCHH-HHHHHHHhCC-CCEE--EEcc-CCCCCceeeeHh
Confidence 2 4899999999864 89999999999999999999999985 9999999986 5653 2321 211 0 12233
Q ss_pred HHHhcC--C--CEEe-ccchHHHHHHHHHHHHHHHHHcCCCCCC
Q 012478 298 ELEELG--F--KLVA-YPLSLIGVSVRAMQDALTAIKGGRIPSP 336 (462)
Q Consensus 298 eL~~lG--v--~~V~-yp~~ll~aa~~Am~~~l~~l~~g~~~~~ 336 (462)
|+--+. + +.|= |.. +-.....|+++..++.++|.+|.+
T Consensus 229 D~lG~~~~~~pkf~k~y~~-~~~~~~~a~~~y~~~V~~~~fP~~ 271 (275)
T 3vav_A 229 DMLGVFPGKRPRFVKDFMQ-GQPSIFAAVEAYVRAVKDGSFPGP 271 (275)
T ss_dssp HHTTCSCSCCCTTCCCCCT-TCSSHHHHHHHHHHHHHHTCSSCG
T ss_pred hhcCCCCCCCCCcchhhhh-hHHHHHHHHHHHHHHHhcCCCCCC
Confidence 432221 1 0000 111 112246677777777787776543
No 18
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=100.00 E-value=6.6e-37 Score=300.89 Aligned_cols=231 Identities=15% Similarity=0.164 Sum_probs=179.6
Q ss_pred hHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEec-cHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcC-CcEE
Q 012478 77 PAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVS-IPVI 154 (462)
Q Consensus 77 ~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vS-G~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~-iPVI 154 (462)
..++||+++++++++++|||||+.||++++++|||+|+++ |++ ++++|+||++.+|++||++|+++|+|+++ .||+
T Consensus 5 t~~~lr~~k~~g~~i~~~tayD~~sA~l~e~aG~d~ilvGdsl~--~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vv 82 (264)
T 1m3u_A 5 TISLLQKYKQEKKRFATITAYDYSFAKLFADEGLNVMLVGDSLG--MTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLL 82 (264)
T ss_dssp CHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHTCCEEEECTTHH--HHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEE
T ss_pred CHHHHHHHHHCCCcEEEEeCcCHHHHHHHHHcCCCEEEECHHHH--HHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEE
Confidence 4678999999999999999999999999999999999997 444 45799999999999999999999999998 5789
Q ss_pred EeCCCC-CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHH--------------H
Q 012478 155 GDGDNG-YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDAR--------------K 219 (462)
Q Consensus 155 aD~DtG-yG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar--------------~ 219 (462)
+|+++| |+++.++.+++++|+++||+|||||||. |++++|+++++++ .
T Consensus 83 aD~pfgsy~~~~~a~~~a~rl~kaGa~aVklEgg~-----------------e~~~~I~al~~agipV~gHiGLtPq~v~ 145 (264)
T 1m3u_A 83 ADLPFMAYATPEQAFENAATVMRAGANMVKIEGGE-----------------WLVETVQMLTERAVPVCGHLGLTPQSVN 145 (264)
T ss_dssp EECCTTSSSSHHHHHHHHHHHHHTTCSEEECCCSG-----------------GGHHHHHHHHHTTCCEEEEEESCGGGHH
T ss_pred EECCCCCcCCHHHHHHHHHHHHHcCCCEEEECCcH-----------------HHHHHHHHHHHCCCCeEeeecCCceeec
Confidence 999995 8888999999999999999999999982 6788888888875 2
Q ss_pred hhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCC--CCCHH
Q 012478 220 ESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTP--ILNPL 297 (462)
Q Consensus 220 ~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP--~ls~~ 297 (462)
.+ ++|+|++|||+.+ +++|+||++|++||||+||+|++++ +++++|+++++ +|+ +-+..+..+. .|=..
T Consensus 146 ~~-ggf~v~grt~~~a----~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it~~l~-iP~--igIGag~~~dgQvLV~~ 216 (264)
T 1m3u_A 146 IF-GGYKVQGRGDEAG----DQLLSDALALEAAGAQLLVLECVPV-ELAKRITEALA-IPV--IGIGAGNVTDGQILVMH 216 (264)
T ss_dssp HH-TSSCCCCCSHHHH----HHHHHHHHHHHHHTCCEEEEESCCH-HHHHHHHHHCS-SCE--EEESSCTTSSEEEECHH
T ss_pred cc-CCeEEEeCCHHHH----HHHHHHHHHHHHCCCcEEEEecCCH-HHHHHHHHhCC-CCE--EEeCCCCCCCcceeeHH
Confidence 23 4899999999864 8999999999999999999999985 79999999986 554 3332211110 12233
Q ss_pred HHHhcC--C--CEEe-ccchHHHHHHHHHHHHHHHHHcCCCCCC
Q 012478 298 ELEELG--F--KLVA-YPLSLIGVSVRAMQDALTAIKGGRIPSP 336 (462)
Q Consensus 298 eL~~lG--v--~~V~-yp~~ll~aa~~Am~~~l~~l~~g~~~~~ 336 (462)
|+--+. + +.+= |. .+-.....|+++..++.++|.+|.+
T Consensus 217 D~lG~~~~~~pkf~k~y~-~~~~~~~~a~~~y~~~V~~~~fP~~ 259 (264)
T 1m3u_A 217 DAFGITGGHIPKFAKNFL-AETGDIRAAVRQYMAEVESGVYPGE 259 (264)
T ss_dssp HHTTCSCSSCCTTCCCSS-TTTSSHHHHHHHHHHHHHHTCSSCG
T ss_pred hhcCCCCCCCCCcchhhh-hhHHHHHHHHHHHHHHHhcCCCCCc
Confidence 332221 1 1111 11 0112245666677777777776643
No 19
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=100.00 E-value=1.2e-35 Score=293.30 Aligned_cols=231 Identities=15% Similarity=0.160 Sum_probs=169.9
Q ss_pred hHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEec-cHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcC-CcEE
Q 012478 77 PAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVS-IPVI 154 (462)
Q Consensus 77 ~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vS-G~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~-iPVI 154 (462)
..++||+++++++++++|||||+.||++++++|||+|+++ |+++ +++|+||+..+|++||++|+++|+|+++ .||+
T Consensus 5 t~~~lr~~k~~g~~i~~~tayDa~sA~l~e~aG~d~ilvGdSl~~--~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vv 82 (275)
T 1o66_A 5 TVNTLQKMKAAGEKIAMLTAYESSFAALMDDAGVEMLLVGDSLGM--AVQGRKSTLPVSLRDMCYHTECVARGAKNAMIV 82 (275)
T ss_dssp CHHHHHHHHHHTCCEEEEECCSHHHHHHHHHTTCCEEEECTTHHH--HTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEE
T ss_pred CHHHHHHHHhCCCcEEEEeCcCHHHHHHHHHcCCCEEEECHHHHH--HHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEE
Confidence 4678999999999999999999999999999999999987 5554 4799999999999999999999999998 5688
Q ss_pred EeCCCC-CC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHH-------------
Q 012478 155 GDGDNG-YG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARK------------- 219 (462)
Q Consensus 155 aD~DtG-yG-~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~------------- 219 (462)
+|+++| |+ ++.++.+++++|+++||+||||||| +|++++|+++++++.
T Consensus 83 aD~pfgsy~~s~~~a~~na~rl~kaGa~aVklEdg-----------------~e~~~~I~al~~agIpV~gHiGLtPQs~ 145 (275)
T 1o66_A 83 SDLPFGAYQQSKEQAFAAAAELMAAGAHMVKLEGG-----------------VWMAETTEFLQMRGIPVCAHIGLTPQSV 145 (275)
T ss_dssp EECCTTSSSSCHHHHHHHHHHHHHTTCSEEEEECS-----------------GGGHHHHHHHHHTTCCEEEEEESCGGGT
T ss_pred EECCCCCccCCHHHHHHHHHHHHHcCCcEEEECCc-----------------HHHHHHHHHHHHcCCCeEeeeccCceee
Confidence 999995 86 7899999999999999999999998 278999999998852
Q ss_pred -hhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCC--CCCH
Q 012478 220 -ESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTP--ILNP 296 (462)
Q Consensus 220 -~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP--~ls~ 296 (462)
.+ ++|+|++|| +. .+++|+||++|++||||+||+|++++ +++++|+++++ +|+ +-+..+..+. .|=.
T Consensus 146 ~~~-ggf~v~grt-~~----a~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it~~l~-iP~--igIGaG~~~dgQvLV~ 215 (275)
T 1o66_A 146 FAF-GGYKVQGRG-GK----AQALLNDAKAHDDAGAAVVLMECVLA-ELAKKVTETVS-CPT--IGIGAGADCDGQVLVM 215 (275)
T ss_dssp TC-------------C----HHHHHHHHHHHHHTTCSEEEEESCCH-HHHHHHHHHCS-SCE--EEESSCSCSSEEEECH
T ss_pred ccc-CCeEEEeCh-HH----HHHHHHHHHHHHHcCCcEEEEecCCH-HHHHHHHHhCC-CCE--EEECCCCCCCcceeeH
Confidence 12 479999999 43 38999999999999999999999985 79999999986 553 4442211110 1223
Q ss_pred HHHHhcC--C--CEEe-ccchHHHHHHHHHHHHHHHHHcCCCCCCC
Q 012478 297 LELEELG--F--KLVA-YPLSLIGVSVRAMQDALTAIKGGRIPSPG 337 (462)
Q Consensus 297 ~eL~~lG--v--~~V~-yp~~ll~aa~~Am~~~l~~l~~g~~~~~~ 337 (462)
.|+--+. + +.|= |. .+-.....|+++..++.++|.+|.+.
T Consensus 216 ~D~lG~~~~~~pkf~k~y~-~~~~~~~~a~~~y~~~V~~~~fP~~~ 260 (275)
T 1o66_A 216 HDMLGIFPGKTAKFVKNFM-QGHDSVQAAVRAYVAEVKAKTFPAAE 260 (275)
T ss_dssp HHHTTCSSSSCCTTCCCSS-TTCSSHHHHHHHHHHHHHHTCSSCGG
T ss_pred HhhcCCCCCCCCCchhhhh-hHHHHHHHHHHHHHHHHhcCCCCCcc
Confidence 3432221 1 1110 11 01122556667777777777766543
No 20
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=100.00 E-value=1.4e-34 Score=286.46 Aligned_cols=232 Identities=16% Similarity=0.185 Sum_probs=171.5
Q ss_pred chHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEec-cHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcC-CcE
Q 012478 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVS-IPV 153 (462)
Q Consensus 76 ~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vS-G~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~-iPV 153 (462)
...++||+++++++++++|||||+.||++++++|||+|+++ |+++ +++|+||++.+|++||++|+++|+|+++ .+|
T Consensus 21 ~t~~~lr~~k~~g~~i~~~tayDa~sA~l~e~aG~d~ilvGdSl~~--~~lG~~dt~~vTldemi~h~~aV~r~~~~~~v 98 (281)
T 1oy0_A 21 IRTHHLQRWKADGHKWAMLTAYDYSTARIFDEAGIPVLLVGDSAAN--VVYGYDTTVPISIDELIPLVRGVVRGAPHALV 98 (281)
T ss_dssp CCHHHHHHHHHHTCCEEEEECCSHHHHHHHHTTTCCEEEECTTHHH--HTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEE
T ss_pred cCHHHHHHHHhCCCcEEEEeCcCHHHHHHHHHcCCCEEEECHHHHH--HHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeE
Confidence 35779999999999999999999999999999999999987 5554 5799999999999999999999999998 557
Q ss_pred EEeCCCC-CC-CHHHHHHHHHH-HHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHH-----------
Q 012478 154 IGDGDNG-YG-NAMNVKRTVKG-YIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARK----------- 219 (462)
Q Consensus 154 IaD~DtG-yG-~~~nv~rtVk~-l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~----------- 219 (462)
++|+++| |+ ++.++.+++.+ +.++||+|||||||. |++++|+++++++.
T Consensus 99 vaD~pfgsy~~s~~~a~~na~rl~~eaGa~aVklEdg~-----------------e~~~~I~al~~agIpV~gHiGLtPq 161 (281)
T 1oy0_A 99 VADLPFGSYEAGPTAALAAATRFLKDGGAHAVKLEGGE-----------------RVAEQIACLTAAGIPVMAHIGFTPQ 161 (281)
T ss_dssp EEECCTTSSTTCHHHHHHHHHHHHHTTCCSEEEEEBSG-----------------GGHHHHHHHHHHTCCEEEEEECCC-
T ss_pred EEECCCCcccCCHHHHHHHHHHHHHHhCCeEEEECCcH-----------------HHHHHHHHHHHCCCCEEeeecCCcc
Confidence 7999995 87 68888776544 445999999999982 67889999988851
Q ss_pred ---hhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCC--CC
Q 012478 220 ---ESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTP--IL 294 (462)
Q Consensus 220 ---~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP--~l 294 (462)
.+ ++|+|++||| .+ +++|+||++|++||||+||+|++++ +++++|+++++ +|+ +-+..+..+. .|
T Consensus 162 sv~~~-ggf~v~grt~-~a----~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it~~l~-iP~--igIGaG~~~dgQvL 231 (281)
T 1oy0_A 162 SVNTL-GGFRVQGRGD-AA----EQTIADAIAVAEAGAFAVVMEMVPA-ELATQITGKLT-IPT--VGIGAGPNCDGQVL 231 (281)
T ss_dssp --------------CH-HH----HHHHHHHHHHHHHTCSEEEEESCCH-HHHHHHHHHCS-SCE--EEESSCSCSSEEEE
T ss_pred eeccc-CCeEEEeCcH-HH----HHHHHHHHHHHHcCCcEEEEecCCH-HHHHHHHHhCC-CCE--EEeCCCCCCCccee
Confidence 22 4799999998 43 8999999999999999999999985 79999999986 554 3342211111 12
Q ss_pred CHHHHHhcC--C--CEEe-ccchHHHHHHHHHHHHHHHHHcCCCCCCC
Q 012478 295 NPLELEELG--F--KLVA-YPLSLIGVSVRAMQDALTAIKGGRIPSPG 337 (462)
Q Consensus 295 s~~eL~~lG--v--~~V~-yp~~ll~aa~~Am~~~l~~l~~g~~~~~~ 337 (462)
=..|+--+. + +.|= |. .+-.....|+++..++.++|.+|.+.
T Consensus 232 V~~D~lG~~~~~~pkf~k~y~-~~~~~~~~a~~~y~~~V~~~~fP~~~ 278 (281)
T 1oy0_A 232 VWQDMAGFSGAKTARFVKRYA-DVGGELRRAAMQYAQEVAGGVFPADE 278 (281)
T ss_dssp CHHHHTTCSCSCCCTTCCCCC-CHHHHHHHHHHHHHHHHHTTCSSCSC
T ss_pred eHhhhcCCCCCCCCCchhhhh-hhHHHHHHHHHHHHHHHhcCCCCCcc
Confidence 344443332 1 1111 11 13444667888888888888877543
No 21
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=98.37 E-value=5.6e-05 Score=75.10 Aligned_cols=226 Identities=22% Similarity=0.265 Sum_probs=139.5
Q ss_pred HHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCC-CCCCHH---H-HHHHHHHHHhhc-CC
Q 012478 78 AKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDT-GFISYG---E-MVDQGQLITQAV-SI 151 (462)
Q Consensus 78 a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~-g~vsl~---E-ml~~~~~I~ra~-~i 151 (462)
-++|++.++++++++.-++--++||+.+|+.|.|.|.+=..+-- -+.|.+.. +++++. | +++.++.|.-.+ ++
T Consensus 17 l~~l~~~i~~~~~iig~gaGtGlsAk~~e~gGaDlii~ynsGrf-R~~G~~slag~lpygnaN~iv~e~~~evlp~v~~i 95 (286)
T 2p10_A 17 VDRFQKKIRAGEPIIGGGAGTGLSAKSEEAGDIDLIVIYNSGRY-RMAGRGSLAGLLAYGNANQIVVDMAREVLPVVRHT 95 (286)
T ss_dssp HHHHHHHHHTTCCEEEEEESSHHHHHHHHHTTCSEEEECHHHHH-HHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGCSSS
T ss_pred HHHHHHHHhcCCceEEEecccchhhHHHHhCCCCEEEEeccchh-hhcCccchhhhccccCHHHHHHHHHHhhhccCCCC
Confidence 45788888899999999999999999999999998888644432 24577775 566653 3 455566666555 69
Q ss_pred cEEEeCCCC--CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCC-------cccCHHHHHHHHHHHHHHHHhhC
Q 012478 152 PVIGDGDNG--YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGR-------KVVSREEAVMRIKAAVDARKESG 222 (462)
Q Consensus 152 PVIaD~DtG--yG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk-------~Lvp~ee~~~kI~AA~~Ar~~~g 222 (462)
||++=++.- |.+ .-+..+.+.++|++|+ +. +| ..|..+|+ .=+..++-++-|+.| ++ +
T Consensus 96 PV~Agv~~~DP~~~---~g~~Le~lk~~Gf~Gv-~N---~p-tvglidG~fr~~LEE~gm~~~~eve~I~~A---~~-~- 162 (286)
T 2p10_A 96 PVLAGVNGTDPFMV---MSTFLRELKEIGFAGV-QN---FP-TVGLIDGLFRQNLEETGMSYAQEVEMIAEA---HK-L- 162 (286)
T ss_dssp CEEEEECTTCTTCC---HHHHHHHHHHHTCCEE-EE---CS-CGGGCCHHHHHHHHHTTCCHHHHHHHHHHH---HH-T-
T ss_pred CEEEEECCcCCCcC---HHHHHHHHHHhCCceE-EE---CC-CcccccchhhhhHhhcCCCHHHHHHHHHHH---HH-C-
Confidence 999876653 233 3344478888999999 43 22 12333331 112233334444333 32 2
Q ss_pred CCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCC---------C---CHHH----HHHHHHhCCCC-ceeeeee
Q 012478 223 SDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---------A---SKEE----MKAFCEISPLV-PKMANML 285 (462)
Q Consensus 223 ~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~---------~---s~ee----i~~i~~~v~~v-P~~~N~l 285 (462)
|++=++=++. .+.++++.+||+|+|.+|-. . +.++ ++++++.+..+ |-.+ ++
T Consensus 163 -gL~Ti~~v~~---------~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvi-vL 231 (286)
T 2p10_A 163 -DLLTTPYVFS---------PEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDII-IL 231 (286)
T ss_dssp -TCEECCEECS---------HHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCE-EE
T ss_pred -CCeEEEecCC---------HHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcE-EE
Confidence 4544443333 33688999999999999854 1 4444 33333322111 3322 23
Q ss_pred ecCCCCCCCCHHHH---Hhc--CCCEEeccchHHHHH-HHHHHHHHHHHHc
Q 012478 286 EGGGKTPILNPLEL---EEL--GFKLVAYPLSLIGVS-VRAMQDALTAIKG 330 (462)
Q Consensus 286 ~~~g~tP~ls~~eL---~~l--Gv~~V~yp~~ll~aa-~~Am~~~l~~l~~ 330 (462)
.++| |.-+++|. -++ |..=++-+++..++- -+++.+..+++|.
T Consensus 232 c~gG--pIstpeDv~~~l~~t~G~~G~~gASsier~p~e~ai~~~~~~fk~ 280 (286)
T 2p10_A 232 SHGG--PIANPEDARFILDSCQGCHGFYGASSMERLPAEEAIRSQTLAFKA 280 (286)
T ss_dssp EEST--TCCSHHHHHHHHHHCTTCCEEEESHHHHHHHHHHHHHHHHHHHHT
T ss_pred ecCC--CCCCHHHHHHHHhcCCCccEEEeehhhhcCCHHHHHHHHHHHHHh
Confidence 3332 34455554 455 888888888888775 5667777777775
No 22
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.03 E-value=0.0001 Score=68.55 Aligned_cols=174 Identities=16% Similarity=0.207 Sum_probs=105.7
Q ss_pred HHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012478 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (462)
Q Consensus 101 SArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaa 180 (462)
.|+.++++|++++.++.... .+ ......++.++.|++.+++||++.. |..++.. ++.+.++||+
T Consensus 38 ~a~~~~~~G~d~i~v~~~~~----~~------~~~~~~~~~i~~i~~~~~ipvi~~g--~i~~~~~----~~~~~~~Gad 101 (253)
T 1h5y_A 38 MAVRYEEEGADEIAILDITA----AP------EGRATFIDSVKRVAEAVSIPVLVGG--GVRSLED----ATTLFRAGAD 101 (253)
T ss_dssp HHHHHHHTTCSCEEEEECCC----CT------TTHHHHHHHHHHHHHHCSSCEEEES--SCCSHHH----HHHHHHHTCS
T ss_pred HHHHHHHcCCCEEEEEeCCc----cc------cCCcccHHHHHHHHHhcCCCEEEEC--CCCCHHH----HHHHHHcCCC
Confidence 56788899999998874210 11 1234566778888888899999853 3445433 4567779999
Q ss_pred EEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCC--------------eEEEEecchhhcccHHHHHHHH
Q 012478 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSD--------------IVIVARTDSRQALSLEESLRRS 246 (462)
Q Consensus 181 GI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d--------------~vIiARTDA~~~~gldeAI~Ra 246 (462)
+|+|-... +..++ .+.++ ++. .+.+ +.+..|.... ......++++
T Consensus 102 ~V~i~~~~------------~~~~~-~~~~~---~~~---~g~~~i~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~e~~ 160 (253)
T 1h5y_A 102 KVSVNTAA------------VRNPQ-LVALL---ARE---FGSQSTVVAIDAKWNGEYYEVYVKGGRE--ATGLDAVKWA 160 (253)
T ss_dssp EEEESHHH------------HHCTH-HHHHH---HHH---HCGGGEEEEEEEEECSSSEEEEETTTTE--EEEEEHHHHH
T ss_pred EEEEChHH------------hhCcH-HHHHH---HHH---cCCCcEEEEEEeecCCCcEEEEEeCCee--cCCCCHHHHH
Confidence 99996532 11112 22222 111 1222 1222221100 0012346678
Q ss_pred HHhHhcCCcEEEecCCC--------CHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012478 247 RAFADAGADVLFIDALA--------SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316 (462)
Q Consensus 247 kAy~eAGAD~Ifie~~~--------s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~a 316 (462)
+.+.++|||.|++..+. +.+.++++.+.++ +|+.++ +|-+..-+..++.+.|+.-|+.+..++..
T Consensus 161 ~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~~~-~pvia~----GGi~~~~~~~~~~~~Ga~~v~vgsal~~~ 233 (253)
T 1h5y_A 161 KEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADSVR-IPVIAS----GGAGRVEHFYEAAAAGADAVLAASLFHFR 233 (253)
T ss_dssp HHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHHCS-SCEEEE----SCCCSHHHHHHHHHTTCSEEEESHHHHTT
T ss_pred HHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHhcC-CCEEEe----CCCCCHHHHHHHHHcCCcHHHHHHHHHcC
Confidence 88999999999885432 5678888888764 676543 35432235567778899999999887654
No 23
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=97.87 E-value=0.00021 Score=67.44 Aligned_cols=190 Identities=15% Similarity=0.164 Sum_probs=110.4
Q ss_pred HHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccE
Q 012478 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAG 181 (462)
Q Consensus 102 Arl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaG 181 (462)
|+.++++|++.+.+.... .........++.++.|++.+++||++.. |.-++.. ++.+.++||++
T Consensus 36 a~~~~~~Gad~i~v~d~~----------~~~~~~~~~~~~i~~i~~~~~ipvi~~g--gI~~~~~----~~~~~~~Gad~ 99 (253)
T 1thf_D 36 GKFYSEIGIDELVFLDIT----------ASVEKRKTMLELVEKVAEQIDIPFTVGG--GIHDFET----ASELILRGADK 99 (253)
T ss_dssp HHHHHHTTCCEEEEEESS----------CSSSHHHHHHHHHHHHHTTCCSCEEEES--SCCSHHH----HHHHHHTTCSE
T ss_pred HHHHHHcCCCEEEEECCc----------hhhcCCcccHHHHHHHHHhCCCCEEEeC--CCCCHHH----HHHHHHcCCCE
Confidence 678889999999887421 1111334566778888888899999862 3344433 56677899999
Q ss_pred EEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCC---eEEEEec-ch---hhcccHH-----HHHHHHHHh
Q 012478 182 IILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSD---IVIVART-DS---RQALSLE-----ESLRRSRAF 249 (462)
Q Consensus 182 I~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d---~vIiART-DA---~~~~gld-----eAI~RakAy 249 (462)
|+|-... +-.++ .+.++ .+. .|.+ +-+-.++ +. ...++.. ..++.++.+
T Consensus 100 V~lg~~~------------l~~p~-~~~~~---~~~---~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~ 160 (253)
T 1thf_D 100 VSINTAA------------VENPS-LITQI---AQT---FGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEV 160 (253)
T ss_dssp EEESHHH------------HHCTH-HHHHH---HHH---HCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHH
T ss_pred EEEChHH------------HhChH-HHHHH---HHH---cCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHH
Confidence 9984332 11112 22222 221 1222 1222221 00 0001111 246678888
Q ss_pred HhcCCcEEEecCC--------CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHHHHHHHH
Q 012478 250 ADAGADVLFIDAL--------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVSVRAM 321 (462)
Q Consensus 250 ~eAGAD~Ifie~~--------~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~aa~~Am 321 (462)
.++|++.|++... .+.+.++++.+.++ +|+.++ +|-...-+..++.+.|+.-|+.+..++..-. -.
T Consensus 161 ~~~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~~~~-ipvia~----GGI~~~~d~~~~~~~Gadgv~vGsal~~~~~-~~ 234 (253)
T 1thf_D 161 EKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTT-LPIIAS----GGAGKMEHFLEAFLAGADAALAASVFHFREI-DV 234 (253)
T ss_dssp HHTTCSEEEEEETTTTTSCSCCCHHHHHHHGGGCC-SCEEEE----SCCCSHHHHHHHHHTTCSEEEESHHHHTTCS-CH
T ss_pred HHCCCCEEEEEeccCCCCCCCCCHHHHHHHHHhcC-CCEEEE----CCCCCHHHHHHHHHcCChHHHHHHHHHcCCC-CH
Confidence 8999999998643 24678888887664 666543 3432112456677889999999988776421 13
Q ss_pred HHHHHHHHcCC
Q 012478 322 QDALTAIKGGR 332 (462)
Q Consensus 322 ~~~l~~l~~g~ 332 (462)
.++.+.+++.+
T Consensus 235 ~~~~~~l~~~g 245 (253)
T 1thf_D 235 RELKEYLKKHG 245 (253)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHcC
Confidence 44445555433
No 24
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=97.75 E-value=0.0024 Score=61.12 Aligned_cols=187 Identities=21% Similarity=0.202 Sum_probs=113.8
Q ss_pred cCchHHHHHHHH-hCCCceEecccCC----------hHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHH
Q 012478 74 CLSPAKSLRQIL-ELPGVHQGPACFD----------ALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQG 142 (462)
Q Consensus 74 a~~~a~~LR~ll-~~~~~iv~p~ayD----------alSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~ 142 (462)
+|..-+.+.+.+ .+++.++-.=+++ .-.|+.++++|..+|-+++ .+..
T Consensus 3 ~~~~~~~~~~~~~~~~~livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~~---------------------~~~i 61 (232)
T 3igs_A 3 AMSLLEQLDKNIAASGGLIVSCQPVPGSPLDKPEIVAAMALAAEQAGAVAVRIEG---------------------IDNL 61 (232)
T ss_dssp CCCHHHHHHHHHHHHCCEEEECCCCTTCTTCSHHHHHHHHHHHHHTTCSEEEEES---------------------HHHH
T ss_pred hHHHHHHHHHHhhhcCCEEEEEeCCCCCCCCCcchHHHHHHHHHHCCCeEEEECC---------------------HHHH
Confidence 345555666666 2345666555666 5667888888998876522 3456
Q ss_pred HHHHhhcCCcEEEeCCCCCCCH----HHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHH
Q 012478 143 QLITQAVSIPVIGDGDNGYGNA----MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDAR 218 (462)
Q Consensus 143 ~~I~ra~~iPVIaD~DtGyG~~----~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar 218 (462)
+.|.+.+++||+...-..||+. ..-.+.++.+.++||+.|.+ |.. +.+. + -..++++++++.
T Consensus 62 ~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l-~~~----~~~~---p-~~l~~~i~~~~~----- 127 (232)
T 3igs_A 62 RMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAV-DGT----ARQR---P-VAVEALLARIHH----- 127 (232)
T ss_dssp HHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEE-ECC----SSCC---S-SCHHHHHHHHHH-----
T ss_pred HHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEE-Ccc----ccCC---H-HHHHHHHHHHHH-----
Confidence 8888889999997554444431 01233466778999999988 432 1111 1 133455544432
Q ss_pred HhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEe--cC--------CCCHHHHHHHHHhCCCCceeeeeeecC
Q 012478 219 KESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFI--DA--------LASKEEMKAFCEISPLVPKMANMLEGG 288 (462)
Q Consensus 219 ~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifi--e~--------~~s~eei~~i~~~v~~vP~~~N~l~~~ 288 (462)
. +..+.+-.. ..+ .++...++|||.|.+ .+ .++.+.++++.+. .+|+.. + +
T Consensus 128 --~--g~~v~~~v~-----t~e----ea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~--~ipvIA---~-G 188 (232)
T 3igs_A 128 --H--HLLTMADCS-----SVD----DGLACQRLGADIIGTTMSGYTTPDTPEEPDLPLVKALHDA--GCRVIA---E-G 188 (232)
T ss_dssp --T--TCEEEEECC-----SHH----HHHHHHHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHT--TCCEEE---E-S
T ss_pred --C--CCEEEEeCC-----CHH----HHHHHHhCCCCEEEEcCccCCCCCCCCCCCHHHHHHHHhc--CCcEEE---E-C
Confidence 1 345554322 223 456778999999953 22 2466788888875 467653 2 3
Q ss_pred CC-CCCCCHHHHHhcCCCEEeccchHHH
Q 012478 289 GK-TPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 289 g~-tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
|- +| -...++.++|+.-|..+..+++
T Consensus 189 GI~t~-~d~~~~~~~GadgV~VGsal~~ 215 (232)
T 3igs_A 189 RYNSP-ALAAEAIRYGAWAVTVGSAITR 215 (232)
T ss_dssp CCCSH-HHHHHHHHTTCSEEEECHHHHC
T ss_pred CCCCH-HHHHHHHHcCCCEEEEehHhcC
Confidence 42 22 2356677889999999977775
No 25
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=97.73 E-value=0.005 Score=59.58 Aligned_cols=210 Identities=17% Similarity=0.188 Sum_probs=120.7
Q ss_pred HHHHHHHhCCCc----eEecccCChH----HHHHHHHhCCcEEEecc-HH--------HHh-hhccCCCCCCCCHHHHHH
Q 012478 79 KSLRQILELPGV----HQGPACFDAL----SAKLVEKSGFSFCFTSG-FS--------ISA-ARLALPDTGFISYGEMVD 140 (462)
Q Consensus 79 ~~LR~ll~~~~~----iv~p~ayDal----SArl~e~aGfdaI~vSG-~a--------vSa-s~lG~PD~g~vsl~Eml~ 140 (462)
+.|.++.+++++ ++++|-.|.- -++.++++|+|+|-++- +. +-. +...+ . .-++++.+++
T Consensus 6 ~~f~~~~~~~~~~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al-~-~G~~~~~~~~ 83 (262)
T 2ekc_A 6 DKFTELKEKREKALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVAL-K-NGIRFEDVLE 83 (262)
T ss_dssp HHHHHHHHHTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHH-H-TTCCHHHHHH
T ss_pred HHHHHHHhcCCceEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHH-H-cCCCHHHHHH
Confidence 456665554443 2345666643 35667788999999862 21 000 00000 0 1268889999
Q ss_pred HHHHHHhhc-CCcEEEeCCCCCCCHHH---HHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHH
Q 012478 141 QGQLITQAV-SIPVIGDGDNGYGNAMN---VKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVD 216 (462)
Q Consensus 141 ~~~~I~ra~-~iPVIaD~DtGyG~~~n---v~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~ 216 (462)
.++.|.+.+ ++|+++ .||-|+.. +.+-++...++|++|+.+=|- |.+|...-++++++
T Consensus 84 ~v~~ir~~~~~~Pi~~---m~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl---------------~~ee~~~~~~~~~~ 145 (262)
T 2ekc_A 84 LSETLRKEFPDIPFLL---MTYYNPIFRIGLEKFCRLSREKGIDGFIVPDL---------------PPEEAEELKAVMKK 145 (262)
T ss_dssp HHHHHHHHCTTSCEEE---ECCHHHHHHHCHHHHHHHHHHTTCCEEECTTC---------------CHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCCCEEE---EecCcHHHHhhHHHHHHHHHHcCCCEEEECCC---------------CHHHHHHHHHHHHH
Confidence 999999888 899999 36766532 356688888999999999553 23554444444333
Q ss_pred HHHhhCCC-eEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCC--------C-----HHHHHHHHHhCCCCceee
Q 012478 217 ARKESGSD-IVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALA--------S-----KEEMKAFCEISPLVPKMA 282 (462)
Q Consensus 217 Ar~~~g~d-~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~--------s-----~eei~~i~~~v~~vP~~~ 282 (462)
.|-+ ..+++-+.. .+|.+.+.+.+...++..++. . .+.++++.+.. .+|+.+
T Consensus 146 ----~gl~~i~l~~p~t~---------~~rl~~ia~~a~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~-~~pv~v 211 (262)
T 2ekc_A 146 ----YVLSFVPLGAPTST---------RKRIKLICEAADEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELC-DKPVVV 211 (262)
T ss_dssp ----TTCEECCEECTTCC---------HHHHHHHHHHCSSCEEEESSCC---------CHHHHHHHHHHHHHC-CSCEEE
T ss_pred ----cCCcEEEEeCCCCC---------HHHHHHHHHhCCCCEEEEecCCccCCCCCcCcccHHHHHHHHHhhc-CCCEEE
Confidence 2333 333443321 235666666666556554322 1 14556665655 356543
Q ss_pred eeeecCCCCCCCCHHHHHh--cCCCEEeccchHHHHH----HHHHHHHHHHHH
Q 012478 283 NMLEGGGKTPILNPLELEE--LGFKLVAYPLSLIGVS----VRAMQDALTAIK 329 (462)
Q Consensus 283 N~l~~~g~tP~ls~~eL~~--lGv~~V~yp~~ll~aa----~~Am~~~l~~l~ 329 (462)
+.|-. +.+++.+ .|..-|+.|+.+.... ...+++..+.++
T Consensus 212 ----G~GI~---t~e~~~~~~~gADgvIVGSai~~~~~~~~~~~~~~~~~~~~ 257 (262)
T 2ekc_A 212 ----GFGVS---KKEHAREIGSFADGVVVGSALVKLAGQKKIEDLGNLVKELK 257 (262)
T ss_dssp ----ESSCC---SHHHHHHHHTTSSEEEECHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ----eCCCC---CHHHHHHHHcCCCEEEECHHHHhhhhhhhHHHHHHHHHHHH
Confidence 33421 3555554 4799999999888763 234444444444
No 26
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=97.70 E-value=0.0018 Score=61.81 Aligned_cols=185 Identities=16% Similarity=0.148 Sum_probs=112.5
Q ss_pred chHHHHHHHH-hCCCceEecccCC----------hHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHH
Q 012478 76 SPAKSLRQIL-ELPGVHQGPACFD----------ALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQL 144 (462)
Q Consensus 76 ~~a~~LR~ll-~~~~~iv~p~ayD----------alSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~ 144 (462)
..-+.+.+.+ .+++.++-.=+++ .-.|+.++++|..+|-+++ .+..+.
T Consensus 5 ~~~~~~~~~~~~~~~livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~~---------------------~~~i~~ 63 (229)
T 3q58_A 5 SLLARLEQSVHENGGLIVSCQPVPGSPMDKPEIVAAMAQAAASAGAVAVRIEG---------------------IENLRT 63 (229)
T ss_dssp HHHHHHHHHHHHHCCEEEECCCCTTSTTCSHHHHHHHHHHHHHTTCSEEEEES---------------------HHHHHH
T ss_pred HHHHHHHHHhhhcCCEEEEEeCCCCCCCCCcchHHHHHHHHHHCCCcEEEECC---------------------HHHHHH
Confidence 3445566666 2345666555566 5667888888998876522 345688
Q ss_pred HHhhcCCcEEEeCCCCCCCH----HHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHh
Q 012478 145 ITQAVSIPVIGDGDNGYGNA----MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKE 220 (462)
Q Consensus 145 I~ra~~iPVIaD~DtGyG~~----~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~ 220 (462)
|.+.+++||+...-..|++. ....+.++.+.++||+.|.+ |.. +.+. + -...+++++++.
T Consensus 64 ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l-~~~----~~~~---p-~~l~~~i~~~~~------- 127 (229)
T 3q58_A 64 VRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAF-DAS----FRSR---P-VDIDSLLTRIRL------- 127 (229)
T ss_dssp HGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEE-ECC----SSCC---S-SCHHHHHHHHHH-------
T ss_pred HHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEE-Ccc----ccCC---h-HHHHHHHHHHHH-------
Confidence 88899999996554333320 01234466788999999988 432 1111 1 134455555432
Q ss_pred hCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEe--cC--------CCCHHHHHHHHHhCCCCceeeeeeecCCC
Q 012478 221 SGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFI--DA--------LASKEEMKAFCEISPLVPKMANMLEGGGK 290 (462)
Q Consensus 221 ~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifi--e~--------~~s~eei~~i~~~v~~vP~~~N~l~~~g~ 290 (462)
. +..+.+-+. ..+ .++...++|||.|.+ .+ .++.+.++++.+. .+|+..+ +|-
T Consensus 128 ~--g~~v~~~v~-----t~e----ea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~--~ipvIA~----GGI 190 (229)
T 3q58_A 128 H--GLLAMADCS-----TVN----EGISCHQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSHA--GCRVIAE----GRY 190 (229)
T ss_dssp T--TCEEEEECS-----SHH----HHHHHHHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHTT--TCCEEEE----SSC
T ss_pred C--CCEEEEecC-----CHH----HHHHHHhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHHc--CCCEEEE----CCC
Confidence 1 455555332 233 456778999999953 22 2466788888775 4666532 342
Q ss_pred -CCCCCHHHHHhcCCCEEeccchHHH
Q 012478 291 -TPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 291 -tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
+| -...++.++|+.-|..+..+++
T Consensus 191 ~t~-~d~~~~~~~GadgV~VGsai~~ 215 (229)
T 3q58_A 191 NTP-ALAANAIEHGAWAVTVGSAITR 215 (229)
T ss_dssp CSH-HHHHHHHHTTCSEEEECHHHHC
T ss_pred CCH-HHHHHHHHcCCCEEEEchHhcC
Confidence 22 2346677889999999977765
No 27
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=97.69 E-value=0.0004 Score=65.47 Aligned_cols=176 Identities=15% Similarity=0.131 Sum_probs=105.0
Q ss_pred HHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012478 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (462)
Q Consensus 101 SArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaa 180 (462)
.|+.++++|++++.++... .........++.++.|++.+++||++. .|+-+.. .++.+.++||+
T Consensus 36 ~a~~~~~~Gad~i~v~d~~----------~~~~~~~~~~~~i~~i~~~~~iPvi~~--Ggi~~~~----~~~~~~~~Gad 99 (252)
T 1ka9_F 36 AARAYDEAGADELVFLDIS----------ATHEERAILLDVVARVAERVFIPLTVG--GGVRSLE----DARKLLLSGAD 99 (252)
T ss_dssp HHHHHHHHTCSCEEEEECC----------SSTTCHHHHHHHHHHHHTTCCSCEEEE--SSCCSHH----HHHHHHHHTCS
T ss_pred HHHHHHHcCCCEEEEEcCC----------ccccCccccHHHHHHHHHhCCCCEEEE--CCcCCHH----HHHHHHHcCCC
Confidence 4577788999999887321 111234456777889999899999996 2333443 45566678999
Q ss_pred EEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeE---EEEecc----hhhcccH-----HHHHHHHHH
Q 012478 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIV---IVARTD----SRQALSL-----EESLRRSRA 248 (462)
Q Consensus 181 GI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~v---IiARTD----A~~~~gl-----deAI~RakA 248 (462)
+|+|-... +-.+ +.+.++.. .. +.+.+ +-.+++ .....+. ...+++++.
T Consensus 100 ~V~lg~~~------------l~~p-~~~~~~~~---~~---~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~ 160 (252)
T 1ka9_F 100 KVSVNSAA------------VRRP-ELIRELAD---HF---GAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVK 160 (252)
T ss_dssp EEEECHHH------------HHCT-HHHHHHHH---HH---CGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHH
T ss_pred EEEEChHH------------HhCc-HHHHHHHH---Hc---CCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHH
Confidence 99995432 1111 22333322 21 21211 111211 0001111 124667888
Q ss_pred hHhcCCcEEEecCC--------CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012478 249 FADAGADVLFIDAL--------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316 (462)
Q Consensus 249 y~eAGAD~Ifie~~--------~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~a 316 (462)
+.++||+.|++... .+.+.++++.+.++ +|+.++ +|-...-...++.+.|+.-|+.+..++..
T Consensus 161 ~~~~G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~~~-ipvia~----GGI~~~~d~~~~~~~Gadgv~vgsal~~~ 231 (252)
T 1ka9_F 161 GVELGAGEILLTSMDRDGTKEGYDLRLTRMVAEAVG-VPVIAS----GGAGRMEHFLEAFQAGAEAALAASVFHFG 231 (252)
T ss_dssp HHHHTCCEEEEEETTTTTTCSCCCHHHHHHHHHHCS-SCEEEE----SCCCSHHHHHHHHHTTCSEEEESHHHHTT
T ss_pred HHHcCCCEEEEecccCCCCcCCCCHHHHHHHHHHcC-CCEEEe----CCCCCHHHHHHHHHCCCHHHHHHHHHHcC
Confidence 88999999998643 24778889888775 676543 34321124566777899999998877754
No 28
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=97.64 E-value=0.00078 Score=66.21 Aligned_cols=122 Identities=24% Similarity=0.314 Sum_probs=88.0
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++|+.+ ||+++.-...+.+|..+-++.++++.. ...-|++=+-+ .+.+|+
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~--------~GttGE~~~Ls~~Er~~v~~~~~~~~~---gr~pviaGvg~---~~t~~a 84 (289)
T 2yxg_A 19 DFDGLEENINFLIENGVSGIVA--------VGTTGESPTLSHEEHKKVIEKVVDVVN---GRVQVIAGAGS---NCTEEA 84 (289)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEE--------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEeCCC---CCHHHH
Confidence 5677889999999999999988 677777778899999998888887754 35666666543 457899
Q ss_pred HHHHHHhHhcCCcEEEecCC----CCHHHHH----HHHHhCCCCceee-eeeecCCCC-CCCCHHHHHhc
Q 012478 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKMA-NMLEGGGKT-PILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~~-N~l~~~g~t-P~ls~~eL~~l 302 (462)
|+.++..+++|||++++-.+ ++.+++. ++++..+ +|+++ |+- +.| -.++++.+.+|
T Consensus 85 i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~-lPiilYn~P---~~tg~~l~~~~~~~L 150 (289)
T 2yxg_A 85 IELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESIN-LPIVLYNVP---SRTAVNLEPKTVKLL 150 (289)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS-SCEEEEECH---HHHSCCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeCc---cccCcCCCHHHHHHH
Confidence 99999999999999987433 4555555 4455554 57543 432 111 24677666555
No 29
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=97.64 E-value=0.00081 Score=66.23 Aligned_cols=122 Identities=17% Similarity=0.224 Sum_probs=88.1
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++|+.+ ||+++.-...+.+|..+-+++++++.. ...-|++=+-+ .+.+|+
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~--------~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~---~~t~~a 84 (294)
T 2ehh_A 19 DYEALGNLIEFHVDNGTDAILV--------CGTTGESPTLTFEEHEKVIEFAVKRAA---GRIKVIAGTGG---NATHEA 84 (294)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEE--------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEECCC---SCHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecCC---CCHHHH
Confidence 5677889999999999999998 677777778899999988888887754 35666666543 457899
Q ss_pred HHHHHHhHhcCCcEEEecCC----CCHHHHH----HHHHhCCCCceee-eeeecCCCC-CCCCHHHHHhc
Q 012478 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKMA-NMLEGGGKT-PILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~~-N~l~~~g~t-P~ls~~eL~~l 302 (462)
|+.++..+++|||++++-.+ ++.+++. ++++..+ +|+++ |+- +.| -.++++.+.+|
T Consensus 85 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~P---~~tg~~l~~~~~~~L 150 (294)
T 2ehh_A 85 VHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVD-IPIIIYNIP---SRTCVEISVDTMFKL 150 (294)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC-SCEEEEECH---HHHSCCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeCC---cccCcCCCHHHHHHH
Confidence 99999999999999987443 4555555 4455554 57543 432 111 14677766655
No 30
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=97.62 E-value=0.00032 Score=69.00 Aligned_cols=125 Identities=23% Similarity=0.296 Sum_probs=89.7
Q ss_pred CCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhccc
Q 012478 159 NGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS 238 (462)
Q Consensus 159 tGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~g 238 (462)
+| =|.....+.++.+++.|++||.+ ||+++.-...+.+|..+-+++++++.. ...-|++=+-+ .+
T Consensus 17 dg-iD~~~l~~lv~~li~~Gv~gl~~--------~GttGE~~~Ls~~Er~~v~~~~~~~~~---gr~pvi~Gvg~---~~ 81 (291)
T 3a5f_A 17 TG-VDFDKLSELIEWHIKSKTDAIIV--------CGTTGEATTMTETERKETIKFVIDKVN---KRIPVIAGTGS---NN 81 (291)
T ss_dssp SS-BCHHHHHHHHHHHHHTTCCEEEE--------SSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCC---SS
T ss_pred CC-cCHHHHHHHHHHHHHcCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEeCCc---cc
Confidence 35 67778889999999999999998 667776678899999998988887754 34555655533 45
Q ss_pred HHHHHHHHHHhHhcCCcEEEecCC----CCHHHHHHHHH----hCCCCcee-eeeeecCCCC-CCCCHHHHHhc
Q 012478 239 LEESLRRSRAFADAGADVLFIDAL----ASKEEMKAFCE----ISPLVPKM-ANMLEGGGKT-PILNPLELEEL 302 (462)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifie~~----~s~eei~~i~~----~v~~vP~~-~N~l~~~g~t-P~ls~~eL~~l 302 (462)
.+|+|+.++..+++|||++++-.+ ++.+++.+..+ ..+ +|++ .|+ |+.| -.++++.+.+|
T Consensus 82 t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~-lPiilYn~---P~~tg~~l~~~~~~~L 151 (291)
T 3a5f_A 82 TAASIAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAVS-TPIIIYNV---PGRTGLNITPGTLKEL 151 (291)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGCC-SCEEEEEC---HHHHSCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeC---ccccCCCCCHHHHHHH
Confidence 789999999999999999987443 46677665544 343 5654 343 2211 24788777776
No 31
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=97.60 E-value=0.00054 Score=67.92 Aligned_cols=122 Identities=19% Similarity=0.255 Sum_probs=88.8
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++||.+ ||+++.-...+.+|..+-++.++++.. ...-|++=+-+ .+.+|+
T Consensus 35 D~~~l~~lv~~li~~Gv~gl~v--------~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~---~st~~a 100 (304)
T 3cpr_A 35 DIAAGREVAAYLVDKGLDSLVL--------AGTTGESPTTTAAEKLELLKAVREEVG---DRAKLIAGVGT---NNTRTS 100 (304)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE--------SSTTTTTTTSCHHHHHHHHHHHHHHHT---TTSEEEEECCC---SCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEecCCC---CCHHHH
Confidence 5677889999999999999998 677777778899999988988887753 35666666543 467999
Q ss_pred HHHHHHhHhcCCcEEEecCC----CCHHHHH----HHHHhCCCCcee-eeeeecCCCC-CCCCHHHHHhc
Q 012478 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKM-ANMLEGGGKT-PILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~-~N~l~~~g~t-P~ls~~eL~~l 302 (462)
|+.++..+++|||++++-.+ ++.+++. ++++..+ +|++ .|+- +.| -.++++.+.+|
T Consensus 101 i~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~-lPiilYn~P---~~tg~~l~~~~~~~L 166 (304)
T 3cpr_A 101 VELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATE-VPICLYDIP---GRSGIPIESDTMRRL 166 (304)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC-SCEEEEECH---HHHSSCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeCc---cccCcCCCHHHHHHH
Confidence 99999999999999887433 4555554 4555554 5754 3532 111 24777777776
No 32
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=97.60 E-value=0.009 Score=55.18 Aligned_cols=155 Identities=15% Similarity=0.161 Sum_probs=95.7
Q ss_pred HHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCH---HHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHh
Q 012478 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISY---GEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKA 177 (462)
Q Consensus 101 SArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl---~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~A 177 (462)
.++.+.++|+++|.+. .+|.....+ .+++..++.+++..++||+++- .++.+.++
T Consensus 36 ~~~~~~~~G~~~i~l~----------~~~~~~~~~~~~~~~~~~l~~~~~~~~v~v~v~~------------~~~~a~~~ 93 (227)
T 2tps_A 36 VVQKALKGGATLYQFR----------EKGGDALTGEARIKFAEKAQAACREAGVPFIVND------------DVELALNL 93 (227)
T ss_dssp HHHHHHHHTCSEEEEC----------CCSTTCCCHHHHHHHHHHHHHHHHHHTCCEEEES------------CHHHHHHH
T ss_pred HHHHHHHCCCCEEEEe----------cCCCCHhHHHHHHHHHHHHHHHHHHcCCeEEEcC------------HHHHHHHc
Confidence 3667778899988654 233333455 6777777888777789999961 13466789
Q ss_pred CccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEE
Q 012478 178 GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVL 257 (462)
Q Consensus 178 GaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~I 257 (462)
|+++||+.+.. .+. .++ ++..+. ++++-+ ....+| ++.+.++|||.|
T Consensus 94 gad~v~l~~~~-------------~~~----~~~------~~~~g~--~~~~~s----~~t~~e----~~~a~~~g~d~v 140 (227)
T 2tps_A 94 KADGIHIGQED-------------ANA----KEV------RAAIGD--MILGVS----AHTMSE----VKQAEEDGADYV 140 (227)
T ss_dssp TCSEEEECTTS-------------SCH----HHH------HHHHTT--SEEEEE----ECSHHH----HHHHHHHTCSEE
T ss_pred CCCEEEECCCc-------------cCH----HHH------HHhcCC--cEEEEe----cCCHHH----HHHHHhCCCCEE
Confidence 99999995532 011 111 111243 333321 123344 344557899999
Q ss_pred Ee----cC--------CCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012478 258 FI----DA--------LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 258 fi----e~--------~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
++ +. ....+.++++.+.++.+|++ ..||-+| -+..++.+.|+..|..+..++.
T Consensus 141 ~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~~~pvi----a~GGI~~-~nv~~~~~~Ga~gv~vgs~i~~ 205 (227)
T 2tps_A 141 GLGPIYPTETKKDTRAVQGVSLIEAVRRQGISIPIV----GIGGITI-DNAAPVIQAGADGVSMISAISQ 205 (227)
T ss_dssp EECCSSCCCSSSSCCCCCTTHHHHHHHHTTCCCCEE----EESSCCT-TTSHHHHHTTCSEEEESHHHHT
T ss_pred EECCCcCCCCCCCCCCccCHHHHHHHHHhCCCCCEE----EEcCCCH-HHHHHHHHcCCCEEEEhHHhhc
Confidence 85 31 12457788887765424543 2345553 4678888999999999988774
No 33
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=97.59 E-value=0.00046 Score=68.31 Aligned_cols=123 Identities=20% Similarity=0.263 Sum_probs=86.5
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCC-CeEEEEecchhhcccHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGS-DIVIVARTDSRQALSLEE 241 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~-d~vIiARTDA~~~~glde 241 (462)
|.....+.++.+++.|++||.+ ||+++.-...+.+|..+-+++++++.. . ..-|++=+-+ .+.++
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~v--------~GttGE~~~Ls~~Er~~v~~~~~~~~~---g~rvpviaGvg~---~~t~~ 91 (301)
T 3m5v_A 26 DEQSYARLIKRQIENGIDAVVP--------VGTTGESATLTHEEHRTCIEIAVETCK---GTKVKVLAGAGS---NATHE 91 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEC--------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEEECCC---SSHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC---CCCCeEEEeCCC---CCHHH
Confidence 5677889999999999999988 677777778899999888888888764 4 5666765533 46799
Q ss_pred HHHHHHHhHhcCCcEEEecCC----CCHHHHH----HHHHhCCCCcee-eeeeecCCCCCCCCHHHHHhc
Q 012478 242 SLRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKM-ANMLEGGGKTPILNPLELEEL 302 (462)
Q Consensus 242 AI~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~-~N~l~~~g~tP~ls~~eL~~l 302 (462)
+|+.++.++++|||++++-.+ ++.+++. ++++.++ +|++ .|+-..-| -.++++.+.+|
T Consensus 92 ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~P~~tg--~~l~~~~~~~L 158 (301)
T 3m5v_A 92 AVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVD-IPVLLYNVPGRTG--CEISTDTIIKL 158 (301)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS-SCEEEEECHHHHS--CCCCHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCC-CCEEEEeCchhhC--cCCCHHHHHHH
Confidence 999999999999999987543 4555544 4445554 5653 34311001 24566554444
No 34
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=97.59 E-value=0.00062 Score=67.60 Aligned_cols=122 Identities=17% Similarity=0.345 Sum_probs=87.1
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++||.+ ||.++.-...+.+|..+-+++++++.. ...-|++-+-+ .+.+|+
T Consensus 34 D~~~l~~lv~~li~~Gv~gi~v--------~GttGE~~~Lt~~Er~~v~~~~~~~~~---grvpviaGvg~---~~t~~a 99 (304)
T 3l21_A 34 DTATAARLANHLVDQGCDGLVV--------SGTTGESPTTTDGEKIELLRAVLEAVG---DRARVIAGAGT---YDTAHS 99 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEE--------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TTSEEEEECCC---SCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEe--------CccccchhhCCHHHHHHHHHHHHHHhC---CCCeEEEeCCC---CCHHHH
Confidence 5678889999999999999988 666676678899999888888888764 45666665533 467999
Q ss_pred HHHHHHhHhcCCcEEEecCC----CCHHHHH----HHHHhCCCCcee-eeeeecCCCC-CCCCHHHHHhc
Q 012478 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKM-ANMLEGGGKT-PILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~-~N~l~~~g~t-P~ls~~eL~~l 302 (462)
|+.++.++++|||++++-.+ ++.+++. ++++.++ +|++ .|+ |+.| -.++++.+.+|
T Consensus 100 i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~---P~~tg~~l~~~~~~~L 165 (304)
T 3l21_A 100 IRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATE-LPMLLYDI---PGRSAVPIEPDTIRAL 165 (304)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSCS-SCEEEEEC---HHHHSSCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeC---ccccCCCCCHHHHHHH
Confidence 99999999999999987543 3555554 4444553 5653 343 1111 24676666655
No 35
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=97.59 E-value=0.00048 Score=67.79 Aligned_cols=122 Identities=19% Similarity=0.258 Sum_probs=86.9
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++||.+ ||+++.-...+.+|..+-+++++++.. ...-|++=+-+ .+.+|+
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~--------~GttGE~~~Ls~~Er~~v~~~~~~~~~---gr~pviaGvg~---~~t~~a 85 (292)
T 2ojp_A 20 CRASLKKLIDYHVASGTSAIVS--------VGTTGESATLNHDEHADVVMMTLDLAD---GRIPVIAGTGA---NATAEA 85 (292)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEE--------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccchhhCCHHHHHHHHHHHHHHhC---CCCcEEEecCC---ccHHHH
Confidence 5677889999999999999988 677777778899999999998887754 34555555533 357899
Q ss_pred HHHHHHhHhcCCcEEEecCC----CCHHHHHHH----HHhCCCCceee-eeeecCCCC-CCCCHHHHHhc
Q 012478 243 LRRSRAFADAGADVLFIDAL----ASKEEMKAF----CEISPLVPKMA-NMLEGGGKT-PILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~~i----~~~v~~vP~~~-N~l~~~g~t-P~ls~~eL~~l 302 (462)
|+.++..+++|||++++-.+ ++.+++.+. ++..+ +|+++ |+- +.| -.++++.+.+|
T Consensus 86 i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~-lPiilYn~P---~~tg~~l~~~~~~~L 151 (292)
T 2ojp_A 86 ISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTD-LPQILYNVP---SRTGCDLLPETVGRL 151 (292)
T ss_dssp HHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTCS-SCEEEECCH---HHHSCCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeCc---chhccCCCHHHHHHH
Confidence 99999999999999887443 465665544 44443 56543 431 111 24677766665
No 36
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=97.58 E-value=0.00051 Score=67.81 Aligned_cols=122 Identities=24% Similarity=0.282 Sum_probs=87.2
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++||.+ ||+++.-...+.+|..+-+++++++.. ...-|++-+-+ .+.+|+
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~~--------~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~---~~t~~a 91 (297)
T 3flu_A 26 HYEQLRDLIDWHIENGTDGIVA--------VGTTGESATLSVEEHTAVIEAVVKHVA---KRVPVIAGTGA---NNTVEA 91 (297)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE--------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEe--------CccccCcccCCHHHHHHHHHHHHHHhC---CCCcEEEeCCC---cCHHHH
Confidence 5678889999999999999998 667776778899999888888888764 35656665433 467999
Q ss_pred HHHHHHhHhcCCcEEEecCC----CCHHHHH----HHHHhCCCCcee-eeeeecCCCC-CCCCHHHHHhc
Q 012478 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKM-ANMLEGGGKT-PILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~-~N~l~~~g~t-P~ls~~eL~~l 302 (462)
|+.++.++++|||++++-.+ ++.+++. ++++..+ +|++ .|+= +.| -.++++.+.+|
T Consensus 92 i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~-lPiilYn~P---~~tg~~l~~~~~~~L 157 (297)
T 3flu_A 92 IALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATS-IPMIIYNVP---GRTVVSMTNDTILRL 157 (297)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC-SCEEEEECH---HHHSSCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC-CCEEEEECC---chhccCCCHHHHHHH
Confidence 99999999999999887543 4555544 4445554 5653 3431 111 24677776665
No 37
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=97.56 E-value=0.00054 Score=67.85 Aligned_cols=122 Identities=23% Similarity=0.325 Sum_probs=87.4
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++||.+ ||+++.-...+.+|..+-+++++++.. ...-|++=+-+ .+.+|+
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v--------~GtTGE~~~Ls~eEr~~v~~~~~~~~~---grvpViaGvg~---~~t~~a 96 (301)
T 1xky_A 31 DFAKTTKLVNYLIDNGTTAIVV--------GGTTGESPTLTSEEKVALYRHVVSVVD---KRVPVIAGTGS---NNTHAS 96 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE--------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCC---SCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC---CCceEEeCCCC---CCHHHH
Confidence 5677889999999999999988 667776778899999999998887754 35556655533 457899
Q ss_pred HHHHHHhHhcCCcEEEecCC----CCHHHHH----HHHHhCCCCceee-eeeecCCCC-CCCCHHHHHhc
Q 012478 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKMA-NMLEGGGKT-PILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~~-N~l~~~g~t-P~ls~~eL~~l 302 (462)
|+.++..+++|||++++-.+ ++.+++. ++++..+ +|+++ |+= +.| -.++++.+.+|
T Consensus 97 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~P---~~tg~~l~~~~~~~L 162 (301)
T 1xky_A 97 IDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTP-LPVMLYNVP---GRSIVQISVDTVVRL 162 (301)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCS-SCEEEEECH---HHHSSCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeCc---cccCCCCCHHHHHHH
Confidence 99999999999999887443 4556555 4445554 57543 432 111 24677776665
No 38
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=97.55 E-value=0.00074 Score=67.50 Aligned_cols=126 Identities=21% Similarity=0.236 Sum_probs=87.0
Q ss_pred CCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhccc
Q 012478 159 NGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS 238 (462)
Q Consensus 159 tGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~g 238 (462)
+|-=|.....+.++.+++.|++||.+ ||+++.-...+.+|..+-++.++++.. ...-|++-+- ..+
T Consensus 26 dg~iD~~~l~~lv~~li~~Gv~gl~v--------~GtTGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg---~~~ 91 (318)
T 3qfe_A 26 TDTLDLASQERYYAYLARSGLTGLVI--------LGTNAEAFLLTREERAQLIATARKAVG---PDFPIMAGVG---AHS 91 (318)
T ss_dssp TTEECHHHHHHHHHHHHTTTCSEEEE--------SSGGGTGGGSCHHHHHHHHHHHHHHHC---TTSCEEEECC---CSS
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEe--------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEeCC---CCC
Confidence 34335678889999999999999998 666676678899999888888888763 4566666553 346
Q ss_pred HHHHHHHHHHhHhcCCcEEEecCC------CCHHHHH----HHHHhCCCCcee-eeeeecCCCC--CCCCHHHHHhc
Q 012478 239 LEESLRRSRAFADAGADVLFIDAL------ASKEEMK----AFCEISPLVPKM-ANMLEGGGKT--PILNPLELEEL 302 (462)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifie~~------~s~eei~----~i~~~v~~vP~~-~N~l~~~g~t--P~ls~~eL~~l 302 (462)
.+|+|+.++.++++|||++++-.+ .+.+++. ++++.++ +|++ .|+ |+.| -.++++.+.+|
T Consensus 92 t~~ai~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~-lPiilYn~---P~~t~g~~l~~~~~~~L 164 (318)
T 3qfe_A 92 TRQVLEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSP-LPVVIYNF---PGVCNGIDLDSDMITTI 164 (318)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHCS-SCEEEEEC---CC----CCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCC-CCEEEEeC---CcccCCCCCCHHHHHHH
Confidence 799999999999999999887543 2445544 4455554 5653 333 3322 24566554443
No 39
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=97.52 E-value=0.0062 Score=58.25 Aligned_cols=173 Identities=16% Similarity=0.120 Sum_probs=107.0
Q ss_pred HHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCC-----CHHHHHHHHHHHH
Q 012478 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYG-----NAMNVKRTVKGYI 175 (462)
Q Consensus 101 SArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG-----~~~nv~rtVk~l~ 175 (462)
-++.+++.|+++|.+.. ++... .... ...++|+++..+.|.. ......+.++..+
T Consensus 50 ~~~~~~~~g~~~i~~~~-~~~~~---~~~~----------------~~~~~~~~v~~~~~~~~~~d~~~~~~~~~v~~a~ 109 (273)
T 2qjg_A 50 TVNDVAEGGANAVLLHK-GIVRH---GHRG----------------YGKDVGLIIHLSGGTAISPNPLKKVIVTTVEEAI 109 (273)
T ss_dssp HHHHHHHHTCSEEEECH-HHHHS---CCCS----------------SSCCCEEEEECEECCTTSSSTTCCEECSCHHHHH
T ss_pred HHHHHHhcCCCEEEeCH-HHHHH---HHHh----------------hcCCCCEEEEEcCCCcCCCCcccchHHHHHHHHH
Confidence 34566788999998764 22110 0000 0125889988887741 0111245567888
Q ss_pred HhCccEE--EeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhc-----ccHHHHHHHH-H
Q 012478 176 KAGFAGI--ILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA-----LSLEESLRRS-R 247 (462)
Q Consensus 176 ~AGaaGI--~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~-----~gldeAI~Ra-k 247 (462)
++|+..| ++-+.. . +.+++.+.++.++++.+..|..+++. +.+... .+.+ .++.+ +
T Consensus 110 ~~Ga~~v~~~l~~~~-----~--------~~~~~~~~~~~v~~~~~~~g~~viv~--~~~~G~~l~~~~~~~-~~~~~a~ 173 (273)
T 2qjg_A 110 RMGADAVSIHVNVGS-----D--------EDWEAYRDLGMIAETCEYWGMPLIAM--MYPRGKHIQNERDPE-LVAHAAR 173 (273)
T ss_dssp HTTCSEEEEEEEETS-----T--------THHHHHHHHHHHHHHHHHHTCCEEEE--EEECSTTCSCTTCHH-HHHHHHH
T ss_pred HcCCCEEEEEEecCC-----C--------CHHHHHHHHHHHHHHHHHcCCCEEEE--eCCCCcccCCCCCHh-HHHHHHH
Confidence 8999999 543431 1 45677777777777776666666553 221111 1222 34444 8
Q ss_pred HhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCC-------HHHHHhcCCCEEeccchHHH
Q 012478 248 AFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILN-------PLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 248 Ay~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls-------~~eL~~lGv~~V~yp~~ll~ 315 (462)
...++|||.|.+.-..+.+.++++++.++ +|+.+ . ||-.+ -+ ..++.+.|+.-|..+..++.
T Consensus 174 ~a~~~Gad~i~~~~~~~~~~l~~i~~~~~-ipvva---~-GGi~~-~~~~~~~~~~~~~~~~Ga~gv~vg~~i~~ 242 (273)
T 2qjg_A 174 LGAELGADIVKTSYTGDIDSFRDVVKGCP-APVVV---A-GGPKT-NTDEEFLQMIKDAMEAGAAGVAVGRNIFQ 242 (273)
T ss_dssp HHHHTTCSEEEECCCSSHHHHHHHHHHCS-SCEEE---E-CCSCC-SSHHHHHHHHHHHHHHTCSEEECCHHHHT
T ss_pred HHHHcCCCEEEECCCCCHHHHHHHHHhCC-CCEEE---E-eCCCC-CCHHHHHHHHHHHHHcCCcEEEeeHHhhC
Confidence 88899999998875567889999998775 56543 2 34332 14 55566899999999887764
No 40
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=97.52 E-value=0.00058 Score=67.70 Aligned_cols=123 Identities=21% Similarity=0.199 Sum_probs=87.8
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++||.+ ||.++.-...+.+|..+-++.++++.. ...-|++=+-+ .+.+++
T Consensus 30 D~~~l~~lv~~li~~Gv~Gl~v--------~GtTGE~~~Ls~eEr~~v~~~~~~~~~---grvpViaGvg~---~~t~~a 95 (303)
T 2wkj_A 30 DKASLRRLVQFNIQQGIDGLYV--------GGSTGEAFVQSLSEREQVLEIVAEEAK---GKIKLIAHVGC---VSTAES 95 (303)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEE--------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TTSEEEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CeeccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecCC---CCHHHH
Confidence 5677889999999999999998 666776678899999888888887753 45666665533 467899
Q ss_pred HHHHHHhHhcCCcEEEecCC----CCHHHHH----HHHHhCCCCcee-eeeeecCCCC-CCCCHHHHHhc
Q 012478 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKM-ANMLEGGGKT-PILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~-~N~l~~~g~t-P~ls~~eL~~l 302 (462)
|+.++..+++|||++++-.+ ++.+++. ++++..+.+|++ .|+= +.| -.++++.+.+|
T Consensus 96 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~~lPiilYn~P---~~tg~~l~~~~~~~L 162 (303)
T 2wkj_A 96 QQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIP---ALSGVKLTLDQINTL 162 (303)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHTTCCEEEEECH---HHHCCCCCHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCCCCCEEEEeCc---cccCCCCCHHHHHHH
Confidence 99999999999999887433 4556555 444554435653 3431 111 14677766665
No 41
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=97.52 E-value=0.00052 Score=68.09 Aligned_cols=122 Identities=16% Similarity=0.242 Sum_probs=86.6
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++||.+ ||+++.-...+.+|..+-+++++++.. ...-|++=+-+ .+.+|+
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v--------~GtTGE~~~Ls~eEr~~vi~~~~~~~~---grvpViaGvg~---~st~~a 96 (306)
T 1o5k_A 31 DLESYERLVRYQLENGVNALIV--------LGTTGESPTVNEDEREKLVSRTLEIVD---GKIPVIVGAGT---NSTEKT 96 (306)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE--------SSGGGTGGGCCHHHHHHHHHHHHHHHT---TSSCEEEECCC---SCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEe--------CccccchhhCCHHHHHHHHHHHHHHhC---CCCeEEEcCCC---ccHHHH
Confidence 6677889999999999999998 666676678899999988888887754 35555655533 457899
Q ss_pred HHHHHHhHhcCCcEEEecCC----CCHHHHHHH----HHhCCCCcee-eeeeecCCCC-CCCCHHHHHhc
Q 012478 243 LRRSRAFADAGADVLFIDAL----ASKEEMKAF----CEISPLVPKM-ANMLEGGGKT-PILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~~i----~~~v~~vP~~-~N~l~~~g~t-P~ls~~eL~~l 302 (462)
|+.++.++++|||++++-.+ ++.+++.+. ++..+ +|++ .|+- +.| -.++++.+.+|
T Consensus 97 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~P---~~tg~~l~~~~~~~L 162 (306)
T 1o5k_A 97 LKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTD-LGIVVYNVP---GRTGVNVLPETAARI 162 (306)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCS-SCEEEEECH---HHHSCCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC-CCEEEEeCc---cccCcCCCHHHHHHH
Confidence 99999999999999987443 465666544 44443 5654 3431 111 14677766555
No 42
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=97.51 E-value=0.0007 Score=68.09 Aligned_cols=122 Identities=20% Similarity=0.196 Sum_probs=88.0
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++||.+ ||+++.-..++.+|..+-+++++++.. ...-|++=+-+ .+.+|+
T Consensus 53 D~~~l~~lv~~li~~Gv~Gl~v--------~GtTGE~~~Ls~eEr~~vi~~~ve~~~---grvpViaGvg~---~st~ea 118 (332)
T 2r8w_A 53 DIEAFSALIARLDAAEVDSVGI--------LGSTGIYMYLTREERRRAIEAAATILR---GRRTLMAGIGA---LRTDEA 118 (332)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEE--------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEEECC---SSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecCC---CCHHHH
Confidence 5677889999999999999988 677777778899999999998888754 35666665433 457899
Q ss_pred HHHHHHhHhcCCcEEEecCC----CCHHHHH----HHHHhCCCCceee-eeeecCCCC-CCCCHHHHHhc
Q 012478 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKMA-NMLEGGGKT-PILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~~-N~l~~~g~t-P~ls~~eL~~l 302 (462)
|+.++.++++|||++++-.+ ++.+++. ++++..+ +|+++ |+= +.| -.++++.+.+|
T Consensus 119 i~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~-lPiilYn~P---~~tg~~l~~e~~~~L 184 (332)
T 2r8w_A 119 VALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATA-LPLAIYNNP---TTTRFTFSDELLVRL 184 (332)
T ss_dssp HHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCS-SCEEEECCH---HHHCCCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeCc---cccCcCCCHHHHHHH
Confidence 99999999999999987543 3555554 4455554 56543 431 111 14677766665
No 43
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=97.50 E-value=0.00051 Score=68.01 Aligned_cols=122 Identities=16% Similarity=0.222 Sum_probs=86.0
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++||.+ ||.++.-...+.+|..+-+++++++.. ..+-|++=+- ..+.+|+
T Consensus 23 D~~~l~~lv~~li~~Gv~gl~v--------~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg---~~~t~~a 88 (300)
T 3eb2_A 23 RADVMGRLCDDLIQAGVHGLTP--------LGSTGEFAYLGTAQREAVVRATIEAAQ---RRVPVVAGVA---STSVADA 88 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSCBBT--------TSGGGTGGGCCHHHHHHHHHHHHHHHT---TSSCBEEEEE---ESSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccCccccCHHHHHHHHHHHHHHhC---CCCcEEEeCC---CCCHHHH
Confidence 5678889999999999999977 666776678899999988888888753 3454555443 2457899
Q ss_pred HHHHHHhHhcCCcEEEecCC----CCHHHHHH----HHHhCCCCcee-eeeeecCCCC-CCCCHHHHHhc
Q 012478 243 LRRSRAFADAGADVLFIDAL----ASKEEMKA----FCEISPLVPKM-ANMLEGGGKT-PILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~~----i~~~v~~vP~~-~N~l~~~g~t-P~ls~~eL~~l 302 (462)
|+.++.++++|||++++-.+ ++.+++.+ +++.++ +|++ .|+ |+.| -.++++.+.+|
T Consensus 89 i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~-lPiilYn~---P~~tg~~l~~~~~~~L 154 (300)
T 3eb2_A 89 VAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAVE-IPVVIYTN---PQFQRSDLTLDVIARL 154 (300)
T ss_dssp HHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCS-SCEEEEEC---TTTCSSCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCC-CCEEEEEC---ccccCCCCCHHHHHHH
Confidence 99999999999999887433 45555544 445555 5653 332 3333 24677666655
No 44
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=97.50 E-value=0.0011 Score=65.39 Aligned_cols=123 Identities=17% Similarity=0.125 Sum_probs=86.7
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++||.+ ||+++.-...+.+|..+-++.++++.. ...-|++=+-+ .+.+|+
T Consensus 22 D~~~l~~lv~~li~~Gv~gl~~--------~GttGE~~~Ls~~Er~~v~~~~~~~~~---gr~pviaGvg~---~~t~~a 87 (294)
T 3b4u_A 22 DIDAMIAHARRCLSNGCDSVTL--------FGTTGEGCSVGSRERQAILSSFIAAGI---APSRIVTGVLV---DSIEDA 87 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEE--------SSTTTTGGGSCHHHHHHHHHHHHHTTC---CGGGEEEEECC---SSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEeCCC---ccHHHH
Confidence 5677889999999999999988 677776678899999888888887753 34445555433 357899
Q ss_pred HHHHHHhHhcCCcEEEecCC-----CCHHHHH----HHHHhCC--CCceee-eeeecCCCC-CCCCHHHHHhc
Q 012478 243 LRRSRAFADAGADVLFIDAL-----ASKEEMK----AFCEISP--LVPKMA-NMLEGGGKT-PILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~-----~s~eei~----~i~~~v~--~vP~~~-N~l~~~g~t-P~ls~~eL~~l 302 (462)
|+.++..+++|||++++-.+ ++.+++. ++++..| .+|+++ |+= +.| -.++++.+.+|
T Consensus 88 i~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P---~~tg~~l~~~~~~~L 157 (294)
T 3b4u_A 88 ADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIP---SVTMVTLSVELVGRL 157 (294)
T ss_dssp HHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECH---HHHSCCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECc---chhCcCCCHHHHHHH
Confidence 99999999999999987532 3555555 4555663 467643 531 111 14677665555
No 45
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=97.49 E-value=0.00039 Score=68.51 Aligned_cols=123 Identities=19% Similarity=0.259 Sum_probs=85.7
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++||.+ ||+++.-...+.+|..+-+++++++.. ..+-|++-+- ..+.+|+
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v--------~GttGE~~~Lt~~Er~~v~~~~~~~~~---grvpviaGvg---~~~t~~a 86 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIV--------NGTTAESPTLTTDEKELILKTVIDLVD---KRVPVIAGTG---TNDTEKS 86 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE--------SSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECC---CSCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccccccCCHHHHHHHHHHHHHHhC---CCCcEEEeCC---cccHHHH
Confidence 5667888999999999999998 667776678899999888888888763 4565666543 2467999
Q ss_pred HHHHHHhHhcCCcEEEecCC----CCHHHHHH----HHHhCCCCcee-eeeeecCCCCCCCCHHHHHhc
Q 012478 243 LRRSRAFADAGADVLFIDAL----ASKEEMKA----FCEISPLVPKM-ANMLEGGGKTPILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~~----i~~~v~~vP~~-~N~l~~~g~tP~ls~~eL~~l 302 (462)
|+.++.++++|||++++-.+ ++.+++.+ +++..+ +|++ .|+=...| -.++++.+.+|
T Consensus 87 i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~-lPiilYn~P~~tg--~~l~~~~~~~L 152 (292)
T 3daq_A 87 IQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVK-LPVVLYNVPSRTN--MTIEPETVEIL 152 (292)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHC-SCEEEEECHHHHS--CCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC-CCEEEEecccccC--CCCCHHHHHHH
Confidence 99999999999999887543 45555544 444443 5653 34211101 14666655554
No 46
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=97.49 E-value=0.0007 Score=66.59 Aligned_cols=123 Identities=24% Similarity=0.268 Sum_probs=86.9
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++|+.+ ||.++.-...+.+|..+-+++++++.. ...-|++-+-+ .+.+|+
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~--------~GttGE~~~Ls~~Er~~v~~~~~~~~~---gr~pviaGvg~---~~t~~a 85 (291)
T 3tak_A 20 DWKSLEKLVEWHIEQGTNSIVA--------VGTTGEASTLSMEEHTQVIKEIIRVAN---KRIPIIAGTGA---NSTREA 85 (291)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEE--------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEE--------CccccccccCCHHHHHHHHHHHHHHhC---CCCeEEEeCCC---CCHHHH
Confidence 5677889999999999999988 666666677889999988888888764 35656665433 467999
Q ss_pred HHHHHHhHhcCCcEEEecCC----CCHHHHH----HHHHhCCCCcee-eeeeecCCCCCCCCHHHHHhc
Q 012478 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKM-ANMLEGGGKTPILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~-~N~l~~~g~tP~ls~~eL~~l 302 (462)
|+.++.++++|||++++-.+ ++.+++. ++++..+ +|++ .|+=...| -.++++.+.+|
T Consensus 86 i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~-lPiilYn~P~~tg--~~l~~~~~~~L 151 (291)
T 3tak_A 86 IELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVE-LPLILYNVPGRTG--VDLSNDTAVRL 151 (291)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC-SCEEEEECHHHHS--CCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEecccccC--CCCCHHHHHHH
Confidence 99999999999999987543 4555544 4445554 5653 34311001 24677777665
No 47
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=97.48 E-value=0.00056 Score=67.35 Aligned_cols=122 Identities=20% Similarity=0.220 Sum_probs=87.9
Q ss_pred CHHHHHHHHHHHHH-hCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHH
Q 012478 163 NAMNVKRTVKGYIK-AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEE 241 (462)
Q Consensus 163 ~~~nv~rtVk~l~~-AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~glde 241 (462)
|.....+.++.+++ .|++||.+ ||+++.-...+.+|..+-++.++++.. ...-|++=+-+ .+.+|
T Consensus 22 D~~~l~~lv~~li~~~Gv~gl~~--------~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~---~~t~~ 87 (293)
T 1f6k_A 22 NEKGLRQIIRHNIDKMKVDGLYV--------GGSTGENFMLSTEEKKEIFRIAKDEAK---DQIALIAQVGS---VNLKE 87 (293)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEE--------SSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEECCC---SCHHH
T ss_pred CHHHHHHHHHHHHhhCCCcEEEe--------CccccchhhCCHHHHHHHHHHHHHHhC---CCCeEEEecCC---CCHHH
Confidence 56778899999999 99999988 666676678899999988888887754 45666666533 45799
Q ss_pred HHHHHHHhHhcCCcEEEecCC----CCHHHHH----HHHHhCCCCcee-eeeeecCCCC-CCCCHHHHHhc
Q 012478 242 SLRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKM-ANMLEGGGKT-PILNPLELEEL 302 (462)
Q Consensus 242 AI~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~-~N~l~~~g~t-P~ls~~eL~~l 302 (462)
+|+.++..+++|||++++-.+ ++.+++. ++++..+ +|++ .|+ |+.| -.++++.+.+|
T Consensus 88 ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~-lPiilYn~---P~~tg~~l~~~~~~~L 154 (293)
T 1f6k_A 88 AVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETG-SNMIVYSI---PFLTGVNMGIEQFGEL 154 (293)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHC-CCEEEEEC---HHHHCCCCCHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC-CCEEEEEC---ccccCcCCCHHHHHHH
Confidence 999999999999999987443 4555555 4455554 4654 343 1112 14677766665
No 48
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=97.47 E-value=0.00029 Score=66.83 Aligned_cols=174 Identities=17% Similarity=0.182 Sum_probs=49.9
Q ss_pred HHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012478 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (462)
Q Consensus 101 SArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaa 180 (462)
-|+.++++|++.|.++...-+ ..+. .. .++.++.|++.+++||++.. |..++.. ++.+.++||+
T Consensus 40 ~a~~~~~~G~~~i~v~d~~~~--~~~~----~~----~~~~i~~i~~~~~ipvi~~G--gi~~~~~----~~~~l~~Gad 103 (247)
T 3tdn_A 40 WVVEVEKRGAGEILLTSIDRD--GTKS----GY----DTEMIRFVRPLTTLPIIASG--GAGKMEH----FLEAFLRGAD 103 (247)
T ss_dssp HHHHHHHTTCSEEEEEETTTT--TCSS----CC----CHHHHHHHGGGCCSCEEEES--CCCSHHH----HHHHHHTTCS
T ss_pred HHHHHHHcCCCEEEEEecCcc--cCCC----cc----cHHHHHHHHHhCCCCEEEeC--CCCCHHH----HHHHHHcCCC
Confidence 467788899999998764211 1111 11 24567888888999999973 3445544 3455678999
Q ss_pred EEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchh--------hccc-----HHHHHHHHH
Q 012478 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSR--------QALS-----LEESLRRSR 247 (462)
Q Consensus 181 GI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~--------~~~g-----ldeAI~Rak 247 (462)
+|+|-... +-++ +++.++.. ..|++.++++- |.. ...+ -.++++.++
T Consensus 104 ~V~ig~~~------------l~dp-~~~~~~~~------~~g~~~iv~~l-d~~~~~~~~~v~~~g~~~~~~~~~~~~a~ 163 (247)
T 3tdn_A 104 KVSINTAA------------VENP-SLITQIAQ------TFGSQAVVVAI-DAKRVDGEFMVFTYSGKKNTGILLRDWVV 163 (247)
T ss_dssp EECCSHHH------------HHCT-HHHHHHHH------HHC--------------------------------------
T ss_pred eeehhhHH------------hhCh-HHHHHHHH------HhCCCcEEEEE-EeccCCCCEEEEECCCcccCCCCHHHHHH
Confidence 99884321 1111 12222221 11222222111 110 0011 124567888
Q ss_pred HhHhcCCcEEEecCCC--------CHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012478 248 AFADAGADVLFIDALA--------SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 248 Ay~eAGAD~Ifie~~~--------s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
.+.++|++.|++.... +.+.++++.+.++ +|+.+ .+|-.-.-...++.++|+.-|+.+..++.
T Consensus 164 ~~~~~G~~~i~~t~~~~~g~~~g~~~~~~~~i~~~~~-iPvia----~GGI~~~~d~~~~~~~Gad~v~vg~al~~ 234 (247)
T 3tdn_A 164 EVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTT-LPIIA----SGGAGKMEHFLEAFLRGADKVSINTAAVE 234 (247)
T ss_dssp ----------------------------------------------------------------------------
T ss_pred HHHhcCCCEEEEecccCCCCcCCCCHHHHHHHHHhCC-CCEEE----ECCCCCHHHHHHHHHcCCcHhhccHHHHc
Confidence 9999999999987642 2345566666553 56543 23432122467778889888887765543
No 49
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=97.47 E-value=0.00054 Score=68.40 Aligned_cols=123 Identities=16% Similarity=0.190 Sum_probs=86.8
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++||.+ ||.++.-...+.+|..+-+++++++.. ...-|++=+- ....+|+
T Consensus 43 D~~~l~~lv~~li~~Gv~Gi~v--------~GtTGE~~~Ls~~Er~~v~~~~v~~~~---grvpViaGvg---~~~t~~a 108 (315)
T 3na8_A 43 DLPALGRSIERLIDGGVHAIAP--------LGSTGEGAYLSDPEWDEVVDFTLKTVA---HRVPTIVSVS---DLTTAKT 108 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEC--------SSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSCBEEECC---CSSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecC---CCCHHHH
Confidence 5678889999999999999988 666666678899999988888888754 3455555443 3467999
Q ss_pred HHHHHHhHhcCCcEEEecCC----CCHHHHHH----HHHhCCCCcee-eeeeecCCCCCCCCHHHHHhc
Q 012478 243 LRRSRAFADAGADVLFIDAL----ASKEEMKA----FCEISPLVPKM-ANMLEGGGKTPILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~~----i~~~v~~vP~~-~N~l~~~g~tP~ls~~eL~~l 302 (462)
|+.++.++++|||++++-.+ ++.+++.+ +++.++ +|++ .|+ +.... -.++++.+.+|
T Consensus 109 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~-P~~tg-~~l~~~~~~~L 174 (315)
T 3na8_A 109 VRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIG-VPVMLYNN-PGTSG-IDMSVELILRI 174 (315)
T ss_dssp HHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCS-SCEEEEEC-HHHHS-CCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC-CcEEEEeC-cchhC-cCCCHHHHHHH
Confidence 99999999999999988543 45555544 445554 5653 343 11011 14677666666
No 50
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=97.46 E-value=0.0077 Score=58.88 Aligned_cols=207 Identities=11% Similarity=0.014 Sum_probs=121.7
Q ss_pred ceEecccC--ChHHHHHHHHhCCcEEEeccHHHHhhhccCCCC---------------CCCCHHHHHHHHHHHHhhc--C
Q 012478 90 VHQGPACF--DALSAKLVEKSGFSFCFTSGFSISAARLALPDT---------------GFISYGEMVDQGQLITQAV--S 150 (462)
Q Consensus 90 ~iv~p~ay--DalSArl~e~aGfdaI~vSG~avSas~lG~PD~---------------g~vsl~Eml~~~~~I~ra~--~ 150 (462)
.+.++|.+ |+-..+.+.+.||-++.+.+...- ...|.|-. ..-..+.+++..+...+.. +
T Consensus 15 v~~Aag~~~~~~~~~~~~~~~G~g~i~~~~v~~~-~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~~~~~ 93 (311)
T 1jub_A 15 FMNASGVHCMTIEDLEELKASQAGAYITKSSTLE-KREGNPLPRYVDLELGSINSMGLPNLGFDYYLDYVLKNQKENAQE 93 (311)
T ss_dssp EEECTTSSCSSHHHHHHHHHSSCSCCBCCCBCSS-CBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHHHHHTCSS
T ss_pred cEECCCCCCCCHHHHHHHHHCCCCEEEeCccCCc-ccCCCCCCcEEecccceeecCCCCCccHHHHHHHHHHHHHhcCCC
Confidence 34556664 566667788889887766653321 11233221 1122566666665544344 7
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHhCcc-EEEeCCCCCCCCCCCCC-CCccc-CHHHHHHHHHHHHHHHHhhCCCeEE
Q 012478 151 IPVIGDGDNGYGNAMNVKRTVKGYIKAGFA-GIILEDQVSPKGCGHTR-GRKVV-SREEAVMRIKAAVDARKESGSDIVI 227 (462)
Q Consensus 151 iPVIaD~DtGyG~~~nv~rtVk~l~~AGaa-GI~IEDq~~PKrCGH~~-gk~Lv-p~ee~~~kI~AA~~Ar~~~g~d~vI 227 (462)
.|+++-+= | .+.....+.++.+.++|++ +|.|-=. |-+.. +..+- +.+...+-|++++++. +.++++
T Consensus 94 ~p~~~~i~-g-~~~~~~~~~a~~~~~~g~d~~iein~~-----~P~~~g~~~~g~~~e~~~~iv~~vr~~~---~~Pv~v 163 (311)
T 1jub_A 94 GPIFFSIA-G-MSAAENIAMLKKIQESDFSGITELNLS-----CPNVPGEPQLAYDFEATEKLLKEVFTFF---TKPLGV 163 (311)
T ss_dssp SCCEEEEC-C-SSHHHHHHHHHHHHHSCCCSEEEEESC-----CCCSSSCCCGGGCHHHHHHHHHHHTTTC---CSCEEE
T ss_pred CCEEEEcC-C-CCHHHHHHHHHHHHhcCCCeEEEEecc-----CCCCCCcccccCCHHHHHHHHHHHHHhc---CCCEEE
Confidence 89888762 2 2467888999999999999 8877432 32321 22332 5555555555554442 234444
Q ss_pred EEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCC--------------------------------CHHHHHHHHHhC
Q 012478 228 VARTDSRQALSLEESLRRSRAFADAGADVLFIDALA--------------------------------SKEEMKAFCEIS 275 (462)
Q Consensus 228 iARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~--------------------------------s~eei~~i~~~v 275 (462)
--+.+ .+.++..+-|+.+.++|+|.|.+.... +.+.++++.+.+
T Consensus 164 Ki~~~----~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~ 239 (311)
T 1jub_A 164 KLPPY----FDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRL 239 (311)
T ss_dssp EECCC----CSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTS
T ss_pred EECCC----CCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhc
Confidence 43433 244566677999999999999775421 135667777776
Q ss_pred C-CCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012478 276 P-LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 276 ~-~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
+ .+|+..+ ||-.-.-+..++-++|.+.|..+..++.
T Consensus 240 ~~~ipvi~~----GGI~~~~da~~~l~~GAd~V~vg~~~l~ 276 (311)
T 1jub_A 240 KPEIQIIGT----GGIETGQDAFEHLLCGATMLQIGTALHK 276 (311)
T ss_dssp CTTSEEEEE----SSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred CCCCCEEEE----CCCCCHHHHHHHHHcCCCEEEEchHHHh
Confidence 3 3666543 3422112344444689999999888775
No 51
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=97.46 E-value=0.0012 Score=65.69 Aligned_cols=122 Identities=16% Similarity=0.223 Sum_probs=86.9
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++||.+ ||.++.-...+.+|..+-+++++++.. ...-|++-+-+ .+.+|+
T Consensus 27 D~~~l~~lv~~li~~Gv~gl~v--------~GtTGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~---~~t~~a 92 (309)
T 3fkr_A 27 DLASQKRAVDFMIDAGSDGLCI--------LANFSEQFAITDDERDVLTRTILEHVA---GRVPVIVTTSH---YSTQVC 92 (309)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEE--------SSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccCcccCCHHHHHHHHHHHHHHhC---CCCcEEEecCC---chHHHH
Confidence 5678889999999999999998 666676678899999999998888763 45666666533 467899
Q ss_pred HHHHHHhHhcCCcEEEecCC-------CCHHHHH----HHHHhCCCCcee-eeeeecCCCCCCCCHHHHHhc
Q 012478 243 LRRSRAFADAGADVLFIDAL-------ASKEEMK----AFCEISPLVPKM-ANMLEGGGKTPILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~-------~s~eei~----~i~~~v~~vP~~-~N~l~~~g~tP~ls~~eL~~l 302 (462)
|+.++..+++|||++++-.+ ++.+++. ++++.++ +|++ .|+ ...| -.++++.+.+|
T Consensus 93 i~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~-lPiilYn~-P~tg--~~l~~~~~~~L 160 (309)
T 3fkr_A 93 AARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIA-IPIMVQDA-PASG--TALSAPFLARM 160 (309)
T ss_dssp HHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCS-SCEEEEEC-GGGC--CCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcC-CCEEEEeC-CCCC--CCCCHHHHHHH
Confidence 99999999999999987432 3555554 4445554 5753 453 2212 24676655554
No 52
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=97.46 E-value=0.00065 Score=68.71 Aligned_cols=122 Identities=20% Similarity=0.258 Sum_probs=87.2
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++||.+ ||+++.-..++.+|..+-+++++++.. ...-|++=+-+ .+.+|+
T Consensus 50 D~~~l~~lv~~li~~Gv~Gl~v--------~GtTGE~~~Ls~eEr~~vi~~~ve~~~---grvpViaGvg~---~st~ea 115 (343)
T 2v9d_A 50 DKPGTAALIDDLIKAGVDGLFF--------LGSGGEFSQLGAEERKAIARFAIDHVD---RRVPVLIGTGG---TNARET 115 (343)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEE--------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCS---SCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEe--------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecCC---CCHHHH
Confidence 5678889999999999999988 677777778899999999998887754 35556655533 457899
Q ss_pred HHHHHHhHhcCCcEEEecCC----CCHHHHH----HHHHhCCCCcee-eeeeecCCCC-CCCCHHHHHhc
Q 012478 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKM-ANMLEGGGKT-PILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~-~N~l~~~g~t-P~ls~~eL~~l 302 (462)
|+.++.++++|||++++-.+ ++.+++. ++++.++ +|++ .|+- +.| -.++++.+.+|
T Consensus 116 i~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~-lPiilYn~P---~~tg~~l~~e~~~~L 181 (343)
T 2v9d_A 116 IELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVT-LPVMLYNFP---ALTGQDLTPALVKTL 181 (343)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTCS-SCEEEEECH---HHHSSCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeCc---hhcCcCCCHHHHHHH
Confidence 99999999999999887433 4556655 4445554 5754 3432 111 14677666555
No 53
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=97.46 E-value=0.00047 Score=68.18 Aligned_cols=122 Identities=20% Similarity=0.261 Sum_probs=86.9
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++||.+ ||+++.-...+.+|..+-++.++++.. ...-|++=+-+ .+.+|+
T Consensus 19 D~~~l~~lv~~li~~Gv~gi~v--------~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~---~~t~~a 84 (297)
T 2rfg_A 19 DEKALAGLVDWQIKHGAHGLVP--------VGTTGESPTLTEEEHKRVVALVAEQAQ---GRVPVIAGAGS---NNPVEA 84 (297)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEC--------SSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSCBEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccchhhCCHHHHHHHHHHHHHHhC---CCCeEEEccCC---CCHHHH
Confidence 5677889999999999999988 666776678899999988888887754 34555555433 457899
Q ss_pred HHHHHHhHhcCCcEEEecCC----CCHHHHH----HHHHhCCCCceee-eeeecCCCC-CCCCHHHHHhc
Q 012478 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKMA-NMLEGGGKT-PILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~~-N~l~~~g~t-P~ls~~eL~~l 302 (462)
|+.++..+++|||++++-.+ ++.+++. ++++..+ +|+++ |+- +.| -.++++.+.+|
T Consensus 85 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~P---~~tg~~l~~~~~~~L 150 (297)
T 2rfg_A 85 VRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAID-IPIIVYNIP---PRAVVDIKPETMARL 150 (297)
T ss_dssp HHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCS-SCEEEEECH---HHHSCCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeCc---cccCCCCCHHHHHHH
Confidence 99999999999999987543 4555555 4455554 57543 432 111 14677766665
No 54
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=97.45 E-value=0.0007 Score=67.54 Aligned_cols=123 Identities=23% Similarity=0.276 Sum_probs=86.0
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++||.+ ||.++.-...+.+|..+-++.++++.. ...-|++=+-+ .+.+|+
T Consensus 42 D~~~l~~lv~~li~~Gv~Gl~v--------~GtTGE~~~Ls~~Er~~v~~~~v~~~~---grvpViaGvg~---~st~ea 107 (314)
T 3qze_A 42 DWDSLAKLVDFHLQEGTNAIVA--------VGTTGESATLDVEEHIQVIRRVVDQVK---GRIPVIAGTGA---NSTREA 107 (314)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEE--------SSGGGTGGGCCHHHHHHHHHHHHHHHT---TSSCEEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEeCCC---cCHHHH
Confidence 5678889999999999999988 566666678899999888888888764 35556655433 467999
Q ss_pred HHHHHHhHhcCCcEEEecCC----CCHHHHH----HHHHhCCCCcee-eeeeecCCCCCCCCHHHHHhc
Q 012478 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKM-ANMLEGGGKTPILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~-~N~l~~~g~tP~ls~~eL~~l 302 (462)
|+.++.++++|||++++-.+ ++.+++. ++++.++ +|++ .|+=..-| -.++++.+.+|
T Consensus 108 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~P~~tg--~~l~~~~~~~L 173 (314)
T 3qze_A 108 VALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVA-IPQILYNVPGRTS--CDMLPETVERL 173 (314)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSC-SCEEEEECHHHHS--CCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeCccccC--CCCCHHHHHHH
Confidence 99999999999999987543 4555544 4445554 5653 34311001 24676666554
No 55
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=97.43 E-value=0.0012 Score=64.88 Aligned_cols=122 Identities=21% Similarity=0.327 Sum_probs=86.2
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++||.+ ||+++.-...+.+|..+-+++++++.. ...-|++=+-+ .+.+++
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~--------~GttGE~~~Ls~~Er~~v~~~~~~~~~---gr~pviaGvg~---~~t~~a 84 (292)
T 2vc6_A 19 DEVALHDLVEWQIEEGSFGLVP--------CGTTGESPTLSKSEHEQVVEITIKTAN---GRVPVIAGAGS---NSTAEA 84 (292)
T ss_dssp CHHHHHHHHHHHHHTTCSEEET--------TSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSCBEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecCC---ccHHHH
Confidence 5677889999999999999987 677776678899999999998887754 34545555432 357899
Q ss_pred HHHHHHhHhcCCcEEEecCC----CCHHHHH----HHHHhCCCCceee-eeeecCCCC-CCCCHHHHHhc
Q 012478 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKMA-NMLEGGGKT-PILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~~-N~l~~~g~t-P~ls~~eL~~l 302 (462)
|+.++..+++|||++++-.+ ++.+++. ++++..+ +|+++ |+= +.| -.++++.+.+|
T Consensus 85 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~-lPiilYn~P---~~tg~~l~~~~~~~L 150 (292)
T 2vc6_A 85 IAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAAST-IPIIVYNIP---GRSAIEIHVETLARI 150 (292)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS-SCEEEEECH---HHHSCCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCC-CCEEEEeCc---cccCcCCCHHHHHHH
Confidence 99999999999999987543 3555555 4556664 57543 431 111 14666655554
No 56
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=97.43 E-value=0.01 Score=55.50 Aligned_cols=165 Identities=15% Similarity=0.161 Sum_probs=97.1
Q ss_pred HHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEE----eCCCCCCCHHHHHHHHHHHHH
Q 012478 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIG----DGDNGYGNAMNVKRTVKGYIK 176 (462)
Q Consensus 101 SArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIa----D~DtGyG~~~nv~rtVk~l~~ 176 (462)
.|+.++++|++++.+.+ .+.++.|.+.+++|++. |.+.+.--..+-.+.++.+.+
T Consensus 41 ~a~~~~~~G~~~i~~~~---------------------~~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~ 99 (234)
T 1yxy_A 41 MAKAAQEAGAVGIRANS---------------------VRDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAA 99 (234)
T ss_dssp HHHHHHHHTCSEEEEES---------------------HHHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHT
T ss_pred HHHHHHHCCCcEeecCC---------------------HHHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHHHHH
Confidence 46667788999886531 13467777778999963 443321000112345678889
Q ss_pred hCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcE
Q 012478 177 AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADV 256 (462)
Q Consensus 177 AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~ 256 (462)
+||+.|++.-.. +.+..+. ...+.+++++. . .++..|...... .+ .++.+.++|||.
T Consensus 100 ~Gad~V~l~~~~----~~~~~~~---~~~~~i~~i~~---~----~~~~~v~~~~~t-----~~----ea~~a~~~Gad~ 156 (234)
T 1yxy_A 100 LNIAVIAMDCTK----RDRHDGL---DIASFIRQVKE---K----YPNQLLMADIST-----FD----EGLVAHQAGIDF 156 (234)
T ss_dssp TTCSEEEEECCS----SCCTTCC---CHHHHHHHHHH---H----CTTCEEEEECSS-----HH----HHHHHHHTTCSE
T ss_pred cCCCEEEEcccc----cCCCCCc---cHHHHHHHHHH---h----CCCCeEEEeCCC-----HH----HHHHHHHcCCCE
Confidence 999999984432 1111111 12344444432 2 135556655432 23 377888999999
Q ss_pred E--EecCC---------CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012478 257 L--FIDAL---------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 257 I--fie~~---------~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
| .+.+. .+.+.++++.+. .+|+.+ .||-.-.-+..++.++|+..|..+..++.
T Consensus 157 i~~~v~g~~~~~~~~~~~~~~~i~~~~~~--~ipvia----~GGI~s~~~~~~~~~~Gad~v~vGsal~~ 220 (234)
T 1yxy_A 157 VGTTLSGYTPYSRQEAGPDVALIEALCKA--GIAVIA----EGKIHSPEEAKKINDLGVAGIVVGGAITR 220 (234)
T ss_dssp EECTTTTSSTTSCCSSSCCHHHHHHHHHT--TCCEEE----ESCCCSHHHHHHHHTTCCSEEEECHHHHC
T ss_pred EeeeccccCCCCcCCCCCCHHHHHHHHhC--CCCEEE----ECCCCCHHHHHHHHHCCCCEEEEchHHhC
Confidence 9 33332 235678888775 356543 23432112457788889999999998776
No 57
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=97.42 E-value=0.0016 Score=64.84 Aligned_cols=121 Identities=17% Similarity=0.177 Sum_probs=88.3
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccH
Q 012478 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (462)
Q Consensus 160 GyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gl 239 (462)
|-=|.....+.++.+++.|++||.+ ||.++.-..++.+|..+-+++++++.. ...-|++=+-+ +.
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v--------~GtTGE~~~Ls~eEr~~vi~~~~~~~~---grvpViaGvg~----st 92 (314)
T 3d0c_A 28 REIDWKGLDDNVEFLLQNGIEVIVP--------NGNTGEFYALTIEEAKQVATRVTELVN---GRATVVAGIGY----SV 92 (314)
T ss_dssp CCBCHHHHHHHHHHHHHTTCSEECT--------TSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEEECS----SH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEE--------CcccCChhhCCHHHHHHHHHHHHHHhC---CCCeEEecCCc----CH
Confidence 4336678889999999999999977 677776678899999998988887754 45666665533 46
Q ss_pred HHHHHHHHHhHhcCCcEEEecCC----CCHHHHH----HHHHhCCCCce-eeeeeecCCCCCCCCHHHHHhc
Q 012478 240 EESLRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPK-MANMLEGGGKTPILNPLELEEL 302 (462)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~-~~N~l~~~g~tP~ls~~eL~~l 302 (462)
+++|+.++..+++|||++++-.+ ++.+++. ++++.++ +|+ +.| .. | - ++++.+.+|
T Consensus 93 ~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn--~t-g--~-l~~~~~~~L 157 (314)
T 3d0c_A 93 DTAIELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALD-APSIIYF--KD-A--H-LSDDVIKEL 157 (314)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSS-SCEEEEE--CC-T--T-SCTHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC-CCEEEEe--CC-C--C-cCHHHHHHH
Confidence 89999999999999999987543 4555554 4556665 675 446 11 2 2 676666665
No 58
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=97.42 E-value=0.00083 Score=67.09 Aligned_cols=104 Identities=19% Similarity=0.259 Sum_probs=78.0
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++||.+ ||.++.-...+.+|..+-++.++++.. ...-|++=+-+ .+.+++
T Consensus 41 D~~~l~~li~~li~~Gv~Gl~v--------~GtTGE~~~Ls~~Er~~v~~~~v~~~~---grvpViaGvg~---~st~~a 106 (315)
T 3si9_A 41 DEKAFCNFVEWQITQGINGVSP--------VGTTGESPTLTHEEHKRIIELCVEQVA---KRVPVVAGAGS---NSTSEA 106 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEC--------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCBEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEe--------CccccCccccCHHHHHHHHHHHHHHhC---CCCcEEEeCCC---CCHHHH
Confidence 5678889999999999999987 666776778899999888888888764 35555554432 467999
Q ss_pred HHHHHHhHhcCCcEEEecCC----CCHHHHH----HHHHhCCCCcee
Q 012478 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKM 281 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~ 281 (462)
|+.++.++++|||++++-.+ ++.+++. ++++.++ +|++
T Consensus 107 i~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~-lPii 152 (315)
T 3si9_A 107 VELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAIS-IPII 152 (315)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS-SCEE
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCC-CCEE
Confidence 99999999999999987543 4555544 4445554 5653
No 59
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.41 E-value=0.0011 Score=62.95 Aligned_cols=180 Identities=16% Similarity=0.130 Sum_probs=99.2
Q ss_pred HHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012478 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (462)
Q Consensus 101 SArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaa 180 (462)
-|+.++++|+++|.++.... .-.+. + ..++.++.|++.+++||++. .|+.+..++ +.+.++||+
T Consensus 35 ~a~~~~~~Ga~~i~v~d~~~--~~~~~---g-----~~~~~i~~i~~~~~iPvi~~--ggi~~~~~i----~~~~~~Gad 98 (266)
T 2w6r_A 35 WVVEVEKRGAGEILLTSIDR--DGTKS---G-----YDTEMIRFVRPLTTLPIIAS--GGAGKMEHF----LEAFLAGAD 98 (266)
T ss_dssp HHHHHHHHTCSEEEEEETTT--SSCSS---C-----CCHHHHHHHGGGCCSCEEEE--SCCCSTHHH----HHHHHHTCS
T ss_pred HHHHHHHCCCCEEEEEecCc--ccCCC---c-----ccHHHHHHHHHhcCCCEEEE--CCCCCHHHH----HHHHHcCCc
Confidence 46778889999999975321 11111 1 13456677888889999996 334454443 455568999
Q ss_pred EEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhC--CCeEEEEec----ch---hhcccHH-----HHHHHH
Q 012478 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESG--SDIVIVART----DS---RQALSLE-----ESLRRS 246 (462)
Q Consensus 181 GI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g--~d~vIiART----DA---~~~~gld-----eAI~Ra 246 (462)
||+|-.... .+ -++++++ +.+.+. .+ .+.++++=. +. ....+.+ ...+++
T Consensus 99 ~v~lg~~~~-------~~--~~~~~~~----~~~~~~---~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~ 162 (266)
T 2w6r_A 99 KALAASVFH-------FR--EIDMREL----KEYLKK---HGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWV 162 (266)
T ss_dssp EEECCCCC---------------CHHH----HHHCC-------CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHH
T ss_pred HhhhhHHHH-------hC--CCCHHHH----HHHHHH---cCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHH
Confidence 999954321 00 0012222 222111 12 122222211 10 0011111 245677
Q ss_pred HHhHhcCCcEEEecCC--------CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHHHH
Q 012478 247 RAFADAGADVLFIDAL--------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVS 317 (462)
Q Consensus 247 kAy~eAGAD~Ifie~~--------~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~aa 317 (462)
+.+.++|++.|++... .+.+.++++.+.++ +|+.++ +|-...-...++.+.|+.-|+.+..++...
T Consensus 163 ~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~~-ipvia~----GGI~~~ed~~~~~~~Gadgv~vgsal~~~~ 236 (266)
T 2w6r_A 163 VEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTT-LPIIAS----GGAGKMEHFLEAFLAGADAALAASVFHFRE 236 (266)
T ss_dssp HHHHHTTCSEEEEEETTTTTTCSCCCHHHHHHHGGGCC-SCEEEE----SCCCSHHHHHHHHHHTCSEEEESTTTC---
T ss_pred HHHHHcCCCEEEEEeecCCCCcCCCCHHHHHHHHHHcC-CCEEEe----CCCCCHHHHHHHHHcCCHHHHccHHHHcCC
Confidence 8888999999998542 24678888888764 676543 343211245666778999999998877654
No 60
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=97.41 E-value=0.00059 Score=67.78 Aligned_cols=122 Identities=15% Similarity=0.205 Sum_probs=86.7
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++||.+ ||+++.-...+.+|..+-+++++++.. ....|++-+-+ ...+|+
T Consensus 33 D~~~l~~lv~~li~~Gv~Gl~v--------~GtTGE~~~Ls~~Er~~v~~~~~~~~~---gr~pviaGvg~---~~t~~a 98 (307)
T 3s5o_A 33 DYGKLEENLHKLGTFPFRGFVV--------QGSNGEFPFLTSSERLEVVSRVRQAMP---KNRLLLAGSGC---ESTQAT 98 (307)
T ss_dssp CHHHHHHHHHHHTTSCCSEEEE--------SSGGGTGGGSCHHHHHHHHHHHHHTSC---TTSEEEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccchhhCCHHHHHHHHHHHHHHcC---CCCcEEEecCC---CCHHHH
Confidence 5677888999999999999998 667776678899999888888887753 46777776533 467999
Q ss_pred HHHHHHhHhcCCcEEEecCC------CCHHHHH----HHHHhCCCCcee-eeeeecCCCC-CCCCHHHHHhc
Q 012478 243 LRRSRAFADAGADVLFIDAL------ASKEEMK----AFCEISPLVPKM-ANMLEGGGKT-PILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~------~s~eei~----~i~~~v~~vP~~-~N~l~~~g~t-P~ls~~eL~~l 302 (462)
|+.++..+++|||++++-.+ .+.+++. ++++..+ +|++ .|+ + +.| -.++++.+.+|
T Consensus 99 i~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~-lPiilYn~-P--~~tg~~l~~~~~~~L 166 (307)
T 3s5o_A 99 VEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSP-IPVVLYSV-P--ANTGLDLPVDAVVTL 166 (307)
T ss_dssp HHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCS-SCEEEEEC-H--HHHSCCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcC-CCEEEEeC-C--cccCCCCCHHHHHHH
Confidence 99999999999999987432 3555554 4445554 5653 343 1 111 14677666655
No 61
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=97.39 E-value=0.012 Score=57.63 Aligned_cols=204 Identities=10% Similarity=0.033 Sum_probs=121.7
Q ss_pred eEecccC--ChHHHHHHHHhCCcEEEeccHHHHh-----------------hhccCCCCCCCCHHHHHHHHHHHHhhcCC
Q 012478 91 HQGPACF--DALSAKLVEKSGFSFCFTSGFSISA-----------------ARLALPDTGFISYGEMVDQGQLITQAVSI 151 (462)
Q Consensus 91 iv~p~ay--DalSArl~e~aGfdaI~vSG~avSa-----------------s~lG~PD~g~vsl~Eml~~~~~I~ra~~i 151 (462)
+..+|.+ |.-..+.+++.||-++.+.+...-. ...|+++. ..+.+++..+......+.
T Consensus 18 ~~Aag~~~~~~~~~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~---g~~~~~~~~~~~~~~~~~ 94 (314)
T 2e6f_A 18 MNAAGVLCSTEEDLRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNL---GFDFYLKYASDLHDYSKK 94 (314)
T ss_dssp EECTTSSCSSHHHHHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBS---CHHHHHHHHHHTCCTTTC
T ss_pred EECCCCCCCCHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCc---CHHHHHHHHHHHhhcCCC
Confidence 4455553 3555567788899888765432211 01234332 245555554432222468
Q ss_pred cEEEeCCCCCCCHHHHHHHHHHHHHhCcc---EEEeCCCCCCCCCCCCC-CCccc-CHHHHHHHHHHHHHHHHhhCCCeE
Q 012478 152 PVIGDGDNGYGNAMNVKRTVKGYIKAGFA---GIILEDQVSPKGCGHTR-GRKVV-SREEAVMRIKAAVDARKESGSDIV 226 (462)
Q Consensus 152 PVIaD~DtGyG~~~nv~rtVk~l~~AGaa---GI~IEDq~~PKrCGH~~-gk~Lv-p~ee~~~kI~AA~~Ar~~~g~d~v 226 (462)
|+++-+= | .+.....+.++.+.++|++ +|.|-=. |-+.. +..+- +.+...+-|++++++. +.+++
T Consensus 95 p~~~~i~-g-~~~~~~~~~a~~~~~~g~d~~~~iein~~-----~P~~~g~~~~g~~~~~~~~ii~~vr~~~---~~Pv~ 164 (314)
T 2e6f_A 95 PLFLSIS-G-LSVEENVAMVRRLAPVAQEKGVLLELNLS-----CPNVPGKPQVAYDFEAMRTYLQQVSLAY---GLPFG 164 (314)
T ss_dssp CEEEEEC-C-SSHHHHHHHHHHHHHHHHHHCCEEEEECC-----CCCSTTCCCGGGSHHHHHHHHHHHHHHH---CSCEE
T ss_pred cEEEEeC-C-CCHHHHHHHHHHHHHhCCCcCceEEEEcC-----CCCCCCchhhcCCHHHHHHHHHHHHHhc---CCCEE
Confidence 9888762 2 2567888999999999999 8888432 22221 22232 5565566666666553 24566
Q ss_pred EEEecchhhcccHHHHHHHHHHhHhcC-CcEEEecCCC--------------------------------CHHHHHHHHH
Q 012478 227 IVARTDSRQALSLEESLRRSRAFADAG-ADVLFIDALA--------------------------------SKEEMKAFCE 273 (462)
Q Consensus 227 IiARTDA~~~~gldeAI~RakAy~eAG-AD~Ifie~~~--------------------------------s~eei~~i~~ 273 (462)
+--+.+- +.++..+-|+.+.++| +|.|.+.... +.+.++++.+
T Consensus 165 vK~~~~~----~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~ 240 (314)
T 2e6f_A 165 VKMPPYF----DIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYR 240 (314)
T ss_dssp EEECCCC----CHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHH
T ss_pred EEECCCC----CHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHH
Confidence 6555542 4456666688999999 9999765421 1467777777
Q ss_pred hCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012478 274 ISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 274 ~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
.++.+|+..| ||-.-.-+..++-++|.+.|..+..++.
T Consensus 241 ~~~~ipvi~~----GGI~~~~da~~~l~~GAd~V~ig~~~l~ 278 (314)
T 2e6f_A 241 RCPDKLVFGC----GGVYSGEDAFLHILAGASMVQVGTALQE 278 (314)
T ss_dssp HCTTSEEEEE----SSCCSHHHHHHHHHHTCSSEEECHHHHH
T ss_pred hcCCCCEEEE----CCCCCHHHHHHHHHcCCCEEEEchhhHh
Confidence 7744676544 3422112345544679999999887775
No 62
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=97.37 E-value=0.022 Score=55.11 Aligned_cols=196 Identities=14% Similarity=0.089 Sum_probs=113.7
Q ss_pred HHHHHHHHhCCCce----EecccCChH----HHHHHHHhCCcEEEecc-HHHHhhhccCCCC------------CCCCHH
Q 012478 78 AKSLRQILELPGVH----QGPACFDAL----SAKLVEKSGFSFCFTSG-FSISAARLALPDT------------GFISYG 136 (462)
Q Consensus 78 a~~LR~ll~~~~~i----v~p~ayDal----SArl~e~aGfdaI~vSG-~avSas~lG~PD~------------g~vsl~ 136 (462)
.+.|.++.+++++. +++|-.|.- -++.++++|+|+|-++- +. -.+-|. .-++++
T Consensus 5 ~~~f~~~~~~~~~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~s-----dp~~DG~~i~~a~~~al~~G~~~~ 79 (268)
T 1qop_A 5 ENLFAQLNDRREGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFS-----DPLADGPTIQNANLRAFAAGVTPA 79 (268)
T ss_dssp HHHHHHHHHTTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCS-----CCTTCCHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHhcCCceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECCCCC-----CccCCCHHHHHHHHHHHHcCCCHH
Confidence 34566666555543 344444433 25667788999999863 11 000011 125788
Q ss_pred HHHHHHHHHHhh-cCCcEEEeCCCCCCCHH---HHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHH
Q 012478 137 EMVDQGQLITQA-VSIPVIGDGDNGYGNAM---NVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIK 212 (462)
Q Consensus 137 Eml~~~~~I~ra-~~iPVIaD~DtGyG~~~---nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~ 212 (462)
.+++.++.|.+. +++||++ .+|-|+. ...+-++.+.++|++||.+=|-. .++...-++
T Consensus 80 ~~~~~v~~ir~~~~~~Pv~l---m~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~---------------~e~~~~~~~ 141 (268)
T 1qop_A 80 QCFEMLAIIREKHPTIPIGL---LMYANLVFNNGIDAFYARCEQVGVDSVLVADVP---------------VEESAPFRQ 141 (268)
T ss_dssp HHHHHHHHHHHHCSSSCEEE---EECHHHHHTTCHHHHHHHHHHHTCCEEEETTCC---------------GGGCHHHHH
T ss_pred HHHHHHHHHHhcCCCCCEEE---EEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCC---------------HHHHHHHHH
Confidence 889999999988 7899987 2444431 23567888999999999996642 122222223
Q ss_pred HHHHHHHhhCCC-eEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCC------------CHHHHHHHHHhCCCCc
Q 012478 213 AAVDARKESGSD-IVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALA------------SKEEMKAFCEISPLVP 279 (462)
Q Consensus 213 AA~~Ar~~~g~d-~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~------------s~eei~~i~~~v~~vP 279 (462)
++++ .|.+ .++++-+.. .+|.+.+.+.+.+.+++-++. ..+.++++.+... +|
T Consensus 142 ~~~~----~g~~~i~l~~p~t~---------~~~i~~i~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~~-~p 207 (268)
T 1qop_A 142 AALR----HNIAPIFICPPNAD---------DDLLRQVASYGRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYHA-AP 207 (268)
T ss_dssp HHHH----TTCEEECEECTTCC---------HHHHHHHHHHCCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHTTC-CC
T ss_pred HHHH----cCCcEEEEECCCCC---------HHHHHHHHhhCCCcEEEEecCCcCCCccCCCchHHHHHHHHHhccC-Cc
Confidence 3322 2333 233333321 236666666666566553211 2467777776553 56
Q ss_pred eeeeeeecCCCCCCCCHHHHH---hcCCCEEeccchHHHHH
Q 012478 280 KMANMLEGGGKTPILNPLELE---ELGFKLVAYPLSLIGVS 317 (462)
Q Consensus 280 ~~~N~l~~~g~tP~ls~~eL~---~lGv~~V~yp~~ll~aa 317 (462)
+.+ . +|-. +.++.. +.|...|+.|+.+.+..
T Consensus 208 i~v---g-gGI~---t~e~~~~~~~agAD~vVVGSai~~~~ 241 (268)
T 1qop_A 208 ALQ---G-FGIS---SPEQVSAAVRAGAAGAISGSAIVKII 241 (268)
T ss_dssp EEE---E-SSCC---SHHHHHHHHHTTCSEEEECHHHHHHH
T ss_pred EEE---E-CCCC---CHHHHHHHHHcCCCEEEEChHHhhhH
Confidence 442 3 3421 355554 47999999999887653
No 63
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=97.37 E-value=0.00099 Score=65.49 Aligned_cols=119 Identities=18% Similarity=0.192 Sum_probs=86.4
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++||.+ ||+++.-...+.+|..+-+++++++.. + |++=+-+ .+.+|+
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~v--------~GtTGE~~~Ls~eEr~~v~~~~~~~~~----g--ViaGvg~---~~t~~a 80 (288)
T 2nuw_A 18 NVDALKTHAKNLLEKGIDAIFV--------NGTTGLGPALSKDEKRQNLNALYDVTH----K--LIFQVGS---LNLNDV 80 (288)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE--------TSTTTTGGGSCHHHHHHHHHHHTTTCS----C--EEEECCC---SCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC----C--eEEeeCC---CCHHHH
Confidence 5677889999999999999998 677776678899988888888876642 3 4454432 467899
Q ss_pred HHHHHHhHhcCCcEEEecCC-----CCHHHHH----HHHHhCCCCceee-eeeecCCCC-CCCCHHHHHhc
Q 012478 243 LRRSRAFADAGADVLFIDAL-----ASKEEMK----AFCEISPLVPKMA-NMLEGGGKT-PILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~-----~s~eei~----~i~~~v~~vP~~~-N~l~~~g~t-P~ls~~eL~~l 302 (462)
|+.++..+++|||++++-.+ ++.+++. ++++..+ +|+++ |+= +.| -.++++.+.+|
T Consensus 81 i~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~-lPiilYn~P---~~tg~~l~~~~~~~L 147 (288)
T 2nuw_A 81 MELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARISS-HSLYIYNYP---AATGYDIPPSILKSL 147 (288)
T ss_dssp HHHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHCC-SCEEEEECH---HHHSCCCCHHHHTTT
T ss_pred HHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcC-CCEEEEECc---hHhCcCCCHHHHhcc
Confidence 99999999999999987432 3555555 4455554 57543 431 112 25789999998
No 64
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=97.37 E-value=0.0027 Score=62.23 Aligned_cols=118 Identities=17% Similarity=0.230 Sum_probs=85.2
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++||.+ ||+++.-...+.+|..+-++.++++.. + |++=+-+ .+.+|+
T Consensus 17 D~~~l~~lv~~li~~Gv~gl~v--------~GttGE~~~Ls~~Er~~v~~~~~~~~~----g--vi~Gvg~---~~t~~a 79 (286)
T 2r91_A 17 DPELFANHVKNITSKGVDVVFV--------AGTTGLGPALSLQEKMELTDAATSAAR----R--VIVQVAS---LNADEA 79 (286)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE--------TSTTTTGGGSCHHHHHHHHHHHHHHCS----S--EEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC----C--EEEeeCC---CCHHHH
Confidence 5677889999999999999998 677777778899999888888887753 3 5555432 457899
Q ss_pred HHHHHHhHhcCCcEEEecCC-----CCHHHHH----HHHHhCCCCcee-eeeeecCCCC-CCCCHHHHHh
Q 012478 243 LRRSRAFADAGADVLFIDAL-----ASKEEMK----AFCEISPLVPKM-ANMLEGGGKT-PILNPLELEE 301 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~-----~s~eei~----~i~~~v~~vP~~-~N~l~~~g~t-P~ls~~eL~~ 301 (462)
|+.++..+++|||++++-.+ ++.+++. ++++..+ +|++ .|+ |+.| -.++++.+.+
T Consensus 80 i~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~-lPiilYn~---P~~tg~~l~~~~~~~ 145 (286)
T 2r91_A 80 IALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVS-IPVFLYNY---PAAVGRDVDARAAKE 145 (286)
T ss_dssp HHHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCS-SCEEEEEC---HHHHSSCCCHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeC---hhhcCCCCCHHHHHh
Confidence 99999999999999987433 3555555 4455554 5754 343 1112 1478888776
No 65
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=97.35 E-value=0.0013 Score=65.64 Aligned_cols=122 Identities=22% Similarity=0.263 Sum_probs=87.9
Q ss_pred CCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhccc
Q 012478 159 NGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS 238 (462)
Q Consensus 159 tGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~g 238 (462)
+|-=|.....+.++.+++.|++||.+ ||.++.-...+.+|..+-+++++++.. ...-|++=+- . .
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~Gl~v--------~GtTGE~~~Ls~eEr~~v~~~~v~~~~---grvpViaGvg---~-~ 91 (316)
T 3e96_A 27 DGSIDWHHYKETVDRIVDNGIDVIVP--------CGNTSEFYALSLEEAKEEVRRTVEYVH---GRALVVAGIG---Y-A 91 (316)
T ss_dssp TCCBCHHHHHHHHHHHHTTTCCEECT--------TSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEEEC---S-S
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEe--------CccccCcccCCHHHHHHHHHHHHHHhC---CCCcEEEEeC---c-C
Confidence 34336678889999999999999987 677776678899999888888888764 4566666663 2 6
Q ss_pred HHHHHHHHHHhHhcCCcEEEecCC----CCHHHHH----HHHHhCCCCce-eeeeeecCCCCCCCCHHHHHhc
Q 012478 239 LEESLRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPK-MANMLEGGGKTPILNPLELEEL 302 (462)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~-~~N~l~~~g~tP~ls~~eL~~l 302 (462)
.+|+|+.++.++++|||++++-.+ ++.+++. ++++.++ +|+ +.|. + +.++++.+.+|
T Consensus 92 t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~--g----~~l~~~~~~~L 157 (316)
T 3e96_A 92 TSTAIELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEALD-FPSLVYFK--D----PEISDRVLVDL 157 (316)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHHT-SCEEEEEC--C----TTSCTHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCC-CCEEEEeC--C----CCCCHHHHHHH
Confidence 799999999999999999987533 3555554 4445554 565 3453 1 24566655555
No 66
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=97.33 E-value=0.0022 Score=60.36 Aligned_cols=175 Identities=15% Similarity=0.163 Sum_probs=101.0
Q ss_pred HHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012478 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (462)
Q Consensus 101 SArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaa 180 (462)
.|+.++++|++.+.+...--. .. +..+. ..++.|++.+++||++.. |.-++.. ++.+.++||+
T Consensus 37 ~a~~~~~~Gad~i~v~~~d~~--~~-----~~~~~----~~i~~i~~~~~ipv~v~g--gI~~~~~----~~~~l~~Gad 99 (244)
T 1vzw_A 37 AALAWQRSGAEWLHLVDLDAA--FG-----TGDNR----ALIAEVAQAMDIKVELSG--GIRDDDT----LAAALATGCT 99 (244)
T ss_dssp HHHHHHHTTCSEEEEEEHHHH--HT-----SCCCH----HHHHHHHHHCSSEEEEES--SCCSHHH----HHHHHHTTCS
T ss_pred HHHHHHHcCCCEEEEecCchh--hc-----CCChH----HHHHHHHHhcCCcEEEEC--CcCCHHH----HHHHHHcCCC
Confidence 357888899999999864322 11 22344 445667777899998852 3334433 6677789999
Q ss_pred EEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeE--EEEecchhhcccHH----HHHHHHHHhHhcCC
Q 012478 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIV--IVARTDSRQALSLE----ESLRRSRAFADAGA 254 (462)
Q Consensus 181 GI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~v--IiARTDA~~~~gld----eAI~RakAy~eAGA 254 (462)
+|++--.. +-.++.+.+.++ . .|.... +-.+......++.+ ..++-++.+.++|+
T Consensus 100 ~V~lg~~~------------l~~p~~~~~~~~----~---~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~ 160 (244)
T 1vzw_A 100 RVNLGTAA------------LETPEWVAKVIA----E---HGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGC 160 (244)
T ss_dssp EEEECHHH------------HHCHHHHHHHHH----H---HGGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTC
T ss_pred EEEECchH------------hhCHHHHHHHHH----H---cCCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCC
Confidence 99982211 112222222222 1 121121 22220000011110 34556777888999
Q ss_pred cEEEecCC--------CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhc---CCCEEeccchHHHH
Q 012478 255 DVLFIDAL--------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEEL---GFKLVAYPLSLIGV 316 (462)
Q Consensus 255 D~Ifie~~--------~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~l---Gv~~V~yp~~ll~a 316 (462)
|.|++... .+.+.++++.+.+. +|+.++ ||-...-+..++.++ |+.-|..+..++..
T Consensus 161 ~~i~~~~~~~~~~~~g~~~~~~~~i~~~~~-ipvia~----GGI~~~~d~~~~~~~~~~Gadgv~vG~al~~~ 228 (244)
T 1vzw_A 161 ARYVVTDIAKDGTLQGPNLELLKNVCAATD-RPVVAS----GGVSSLDDLRAIAGLVPAGVEGAIVGKALYAK 228 (244)
T ss_dssp CCEEEEEC-------CCCHHHHHHHHHTCS-SCEEEE----SCCCSHHHHHHHHTTGGGTEEEEEECHHHHTT
T ss_pred CEEEEeccCcccccCCCCHHHHHHHHHhcC-CCEEEE----CCCCCHHHHHHHHhhccCCCceeeeeHHHHcC
Confidence 99988653 35678888888764 676543 343321356778888 99999998876653
No 67
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=97.33 E-value=0.0033 Score=64.26 Aligned_cols=123 Identities=21% Similarity=0.231 Sum_probs=88.5
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
+.....+.++.+++.|++||.+ ||.++.-...+.+|..+-+++++++.. ...-|++=+- ..+.+|+
T Consensus 78 D~~al~~lv~~li~~Gv~Gl~v--------~GTTGE~~~Ls~eEr~~vi~~~ve~~~---grvpViaGvg---~~st~ea 143 (360)
T 4dpp_A 78 DLEAYDDLVNIQIQNGAEGVIV--------GGTTGEGQLMSWDEHIMLIGHTVNCFG---GSIKVIGNTG---SNSTREA 143 (360)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE--------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TTSEEEEECC---CSSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEe--------cccccChhhCCHHHHHHHHHHHHHHhC---CCCeEEEecC---CCCHHHH
Confidence 5678889999999999999998 666776678899999888888887753 4566676553 3467999
Q ss_pred HHHHHHhHhcCCcEEEecCC----CCHHHHHHHHHhCCC-Cce-eeeeeecCCCC-CCCCHHHHHhc
Q 012478 243 LRRSRAFADAGADVLFIDAL----ASKEEMKAFCEISPL-VPK-MANMLEGGGKT-PILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~~i~~~v~~-vP~-~~N~l~~~g~t-P~ls~~eL~~l 302 (462)
|+.++.++++|||++++-.+ ++.+++.+..+.+.. .|+ +.|+ |+.| -.++++.+.+|
T Consensus 144 i~la~~A~~~Gadavlvv~PyY~k~sq~gl~~hf~~IA~a~PiilYNi---P~rTg~~ls~e~l~~L 207 (360)
T 4dpp_A 144 IHATEQGFAVGMHAALHINPYYGKTSIEGLIAHFQSVLHMGPTIIYNV---PGRTGQDIPPRAIFKL 207 (360)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHTTGGGSCEEEEEC---HHHHSCCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCEEEEeC---CcccCCCCCHHHHHHH
Confidence 99999999999999987543 466777666554421 354 3343 1111 24677776666
No 68
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=97.32 E-value=0.013 Score=58.40 Aligned_cols=186 Identities=16% Similarity=0.106 Sum_probs=103.4
Q ss_pred HHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEecc---HHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEe
Q 012478 80 SLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSG---FSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGD 156 (462)
Q Consensus 80 ~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG---~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD 156 (462)
-|-++++.+ +.+..-+.-.|++.+++|.++|-+=- .-..+ ..| +-....++.+++|++.+++||++.
T Consensus 15 ~~~~~~kgg---v~~d~~~~e~A~~ye~~GA~~lsvLe~~~~Di~~-~~g------~~R~~~~~~i~~i~~~v~iPvl~k 84 (297)
T 4adt_A 15 GWCEMLKGG---VIMDVKNVEQAKIAEKAGAIGVMILENIPSELRN-TDG------VARSVDPLKIEEIRKCISINVLAK 84 (297)
T ss_dssp HHHHTTTTC---EEEEESSHHHHHHHHHHTCSEEEECCCCC------CCC------CCCCCCHHHHHHHHTTCCSEEEEE
T ss_pred hHHHHhcCC---cccCCCcHHHHHHHHHcCCCEEEEecCCCCcchh-cCC------cccCCCHHHHHHHHHhcCCCEEEe
Confidence 355555432 45677788899999999999865431 11111 112 111123456677888899999998
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhc
Q 012478 157 GDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA 236 (462)
Q Consensus 157 ~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~ 236 (462)
.-.|| ..-++.++++||++|..-+...|+ +++..++ + ...+..+++-++
T Consensus 85 ~~i~~------ide~qil~aaGAD~Id~s~~~~~~--------------~li~~i~---~--~~~g~~vvv~v~------ 133 (297)
T 4adt_A 85 VRIGH------FVEAQILEELKVDMLDESEVLTMA--------------DEYNHIN---K--HKFKTPFVCGCT------ 133 (297)
T ss_dssp EETTC------HHHHHHHHHTTCSEEEEETTSCCS--------------CSSCCCC---G--GGCSSCEEEEES------
T ss_pred ccCCc------HHHHHHHHHcCCCEEEcCCCCCHH--------------HHHHHHH---h--cCCCCeEEEEeC------
Confidence 64455 445567778999999322211111 1111110 0 001223333222
Q ss_pred ccHHHHHHHHHHhHhcCCcEEEecCC---------------------------------------CCHHHHHHHHHhCCC
Q 012478 237 LSLEESLRRSRAFADAGADVLFIDAL---------------------------------------ASKEEMKAFCEISPL 277 (462)
Q Consensus 237 ~gldeAI~RakAy~eAGAD~Ifie~~---------------------------------------~s~eei~~i~~~v~~ 277 (462)
.++|+.++ .++|||+|.+.+. .+.+.++++.+.++
T Consensus 134 -~~~Ea~~a----~~~Gad~I~v~g~~gTG~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~~~- 207 (297)
T 4adt_A 134 -NLGEALRR----ISEGASMIRTKGEAGTGNIIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLTRKLKR- 207 (297)
T ss_dssp -SHHHHHHH----HHHTCSEEEECCCTTSCCCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHHHTS-
T ss_pred -CHHHHHHH----HhCCCCEEEECCCcCCCchHHHHHHHHHhhhhhhhhccccccccccccccCCCCHHHHHHHHHhcC-
Confidence 23444333 4578888877632 23455667777654
Q ss_pred CceeeeeeecCCC-CCCCCHHHHHhcCCCEEeccchHHH
Q 012478 278 VPKMANMLEGGGK-TPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 278 vP~~~N~l~~~g~-tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
+|+. .+.++ |- +| -+..++.++|+.-|..+..+++
T Consensus 208 iPVi-vvA~G-GI~t~-~dv~~~~~~GAdgVlVGsai~~ 243 (297)
T 4adt_A 208 LPVV-NFAAG-GIATP-ADAAMCMQLGMDGVFVGSGIFE 243 (297)
T ss_dssp CSSE-EEEES-CCCSH-HHHHHHHHTTCSCEEESHHHHT
T ss_pred CCeE-EEecC-CCCCH-HHHHHHHHcCCCEEEEhHHHHc
Confidence 4542 23444 42 33 2456678899999999998884
No 69
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=97.30 E-value=0.0032 Score=59.00 Aligned_cols=174 Identities=9% Similarity=0.129 Sum_probs=100.1
Q ss_pred HHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012478 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (462)
Q Consensus 101 SArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaa 180 (462)
.|+.++++|++.+.+...--. .. +..+. ..++.|++.+++||++. .|.-++.. ++.+.++||+
T Consensus 36 ~a~~~~~~Gad~i~v~~~d~~--~~-----~~~~~----~~i~~i~~~~~ipv~v~--ggi~~~~~----~~~~l~~Gad 98 (244)
T 2y88_A 36 AALGWQRDGAEWIHLVDLDAA--FG-----RGSNH----ELLAEVVGKLDVQVELS--GGIRDDES----LAAALATGCA 98 (244)
T ss_dssp HHHHHHHTTCSEEEEEEHHHH--TT-----SCCCH----HHHHHHHHHCSSEEEEE--SSCCSHHH----HHHHHHTTCS
T ss_pred HHHHHHHcCCCEEEEEcCccc--cc-----CCChH----HHHHHHHHhcCCcEEEE--CCCCCHHH----HHHHHHcCCC
Confidence 357788899999999864321 11 22344 45566777789999885 23334433 6677789999
Q ss_pred EEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeE--EEEec---c-hhhcccH----HHHHHHHHHhH
Q 012478 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIV--IVART---D-SRQALSL----EESLRRSRAFA 250 (462)
Q Consensus 181 GI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~v--IiART---D-A~~~~gl----deAI~RakAy~ 250 (462)
+|++--.. +-.++.+ .+ +.+. .|...+ +-.+. + .....+. ++.++-++.+.
T Consensus 99 ~V~lg~~~------------l~~p~~~-~~---~~~~---~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~ 159 (244)
T 2y88_A 99 RVNVGTAA------------LENPQWC-AR---VIGE---HGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLD 159 (244)
T ss_dssp EEEECHHH------------HHCHHHH-HH---HHHH---HGGGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHH
T ss_pred EEEECchH------------hhChHHH-HH---HHHH---cCCCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHH
Confidence 99982211 1122222 22 2221 111111 11220 0 0000011 03456677888
Q ss_pred hcCCcEEEecCC--------CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhc---CCCEEeccchHHH
Q 012478 251 DAGADVLFIDAL--------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEEL---GFKLVAYPLSLIG 315 (462)
Q Consensus 251 eAGAD~Ifie~~--------~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~l---Gv~~V~yp~~ll~ 315 (462)
++|+|.|++... .+.+.++++.+.+. +|+.+| ||-...-+..++.++ |+.-|..+..++.
T Consensus 160 ~~G~~~i~~~~~~~~~~~~g~~~~~~~~l~~~~~-ipvia~----GGI~~~~d~~~~~~~~~~Gad~v~vG~al~~ 230 (244)
T 2y88_A 160 SEGCSRFVVTDITKDGTLGGPNLDLLAGVADRTD-APVIAS----GGVSSLDDLRAIATLTHRGVEGAIVGKALYA 230 (244)
T ss_dssp HTTCCCEEEEETTTTTTTSCCCHHHHHHHHTTCS-SCEEEE----SCCCSHHHHHHHHTTGGGTEEEEEECHHHHT
T ss_pred hCCCCEEEEEecCCccccCCCCHHHHHHHHHhCC-CCEEEE----CCCCCHHHHHHHHhhccCCCCEEEEcHHHHC
Confidence 899999998652 35678888887654 676544 343221245778888 9999999877665
No 70
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=97.30 E-value=0.038 Score=54.16 Aligned_cols=199 Identities=15% Similarity=0.133 Sum_probs=117.4
Q ss_pred HHHHHHHHhCCCceEec--ccCCh--H-H---HHHHHHhCCcEEEec-cH--------HHHhhh-ccCCCCCCCCHHHHH
Q 012478 78 AKSLRQILELPGVHQGP--ACFDA--L-S---AKLVEKSGFSFCFTS-GF--------SISAAR-LALPDTGFISYGEMV 139 (462)
Q Consensus 78 a~~LR~ll~~~~~iv~p--~ayDa--l-S---Arl~e~aGfdaI~vS-G~--------avSas~-lG~PD~g~vsl~Eml 139 (462)
.+.|.++.+++++..+| .+-|+ - + .+.++++|+|.|=++ -+ -+-.+. .-+ . .-++++.++
T Consensus 6 ~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL-~-~G~~~~~~~ 83 (267)
T 3vnd_A 6 QAKFAALKAQDKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSL-A-AGTTSSDCF 83 (267)
T ss_dssp HHHHHHHHHHTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHH-H-TTCCHHHHH
T ss_pred HHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHH-H-cCCCHHHHH
Confidence 34677766666543322 44454 2 2 355678899999887 11 111111 000 0 127888999
Q ss_pred HHHHHHHhh-cCCcEEEeCCCCCCCHH---HHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHH
Q 012478 140 DQGQLITQA-VSIPVIGDGDNGYGNAM---NVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAV 215 (462)
Q Consensus 140 ~~~~~I~ra-~~iPVIaD~DtGyG~~~---nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~ 215 (462)
+.++.+.+. +++||+.= +|-|+. .+.+-++.+.++|++|+.+=|-. .||..+-+++++
T Consensus 84 ~~v~~ir~~~~~~Pivlm---~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp---------------~ee~~~~~~~~~ 145 (267)
T 3vnd_A 84 DIITKVRAQHPDMPIGLL---LYANLVFANGIDEFYTKAQAAGVDSVLIADVP---------------VEESAPFSKAAK 145 (267)
T ss_dssp HHHHHHHHHCTTCCEEEE---ECHHHHHHHCHHHHHHHHHHHTCCEEEETTSC---------------GGGCHHHHHHHH
T ss_pred HHHHHHHhcCCCCCEEEE---ecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCC---------------HhhHHHHHHHHH
Confidence 999999877 78998874 787762 34667899999999999997742 233333333333
Q ss_pred HHHHhhCCCeE-EEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCC------CC------HHHHHHHHHhCCCCceee
Q 012478 216 DARKESGSDIV-IVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL------AS------KEEMKAFCEISPLVPKMA 282 (462)
Q Consensus 216 ~Ar~~~g~d~v-IiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~------~s------~eei~~i~~~v~~vP~~~ 282 (462)
+. |.+.+ +++=|.. .+|.+.+.+.+-+.|+..++ .+ .+.++++.+... +|+.+
T Consensus 146 ~~----gl~~i~liaP~t~---------~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~-~pv~v 211 (267)
T 3vnd_A 146 AH----GIAPIFIAPPNAD---------ADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFNA-PPPLL 211 (267)
T ss_dssp HT----TCEEECEECTTCC---------HHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTTTC-CCEEE
T ss_pred Hc----CCeEEEEECCCCC---------HHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhcC-CCEEE
Confidence 32 44433 4433322 35888888888777777432 11 233444444332 45542
Q ss_pred eeeecCCCCCCCCHHHHH---hcCCCEEeccchHHHHH
Q 012478 283 NMLEGGGKTPILNPLELE---ELGFKLVAYPLSLIGVS 317 (462)
Q Consensus 283 N~l~~~g~tP~ls~~eL~---~lGv~~V~yp~~ll~aa 317 (462)
++|- -+.++.+ +.|..-|+.|+.+.+..
T Consensus 212 ----GfGI---~~~e~~~~~~~~gADgvVVGSaiv~~i 242 (267)
T 3vnd_A 212 ----GFGI---AEPEQVRAAIKAGAAGAISGSAVVKII 242 (267)
T ss_dssp ----CSSC---CSHHHHHHHHHTTCSEEEECHHHHHHH
T ss_pred ----ECCc---CCHHHHHHHHHcCCCEEEECHHHHHHH
Confidence 3232 1455554 78999999999877644
No 71
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=97.28 E-value=0.003 Score=62.16 Aligned_cols=118 Identities=22% Similarity=0.297 Sum_probs=84.6
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++||.+ ||+++.-...+.+|..+-++.++++.. + |++=+-+ .+.+|+
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~~--------~GttGE~~~Ls~eEr~~v~~~~~~~~~----g--viaGvg~---~~t~~a 80 (293)
T 1w3i_A 18 DKEKLKIHAENLIRKGIDKLFV--------NGTTGLGPSLSPEEKLENLKAVYDVTN----K--IIFQVGG---LNLDDA 80 (293)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE--------SSTTTTGGGSCHHHHHHHHHHHHTTCS----C--EEEECCC---SCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHcC----C--EEEecCC---CCHHHH
Confidence 5677889999999999999998 677776678899998888888877643 3 5555432 457899
Q ss_pred HHHHHHhHhcCCcEEEecCC-----CCHHHHH----HHHHhCCCCceee-eeeecCCCC-CCCCHHHHHh
Q 012478 243 LRRSRAFADAGADVLFIDAL-----ASKEEMK----AFCEISPLVPKMA-NMLEGGGKT-PILNPLELEE 301 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~-----~s~eei~----~i~~~v~~vP~~~-N~l~~~g~t-P~ls~~eL~~ 301 (462)
|+.++.++++|||++++-.+ ++.+++. ++++..+ +|+++ |+= +.| -.++++.+.+
T Consensus 81 i~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~-lPiilYn~P---~~tg~~l~~~~~~~ 146 (293)
T 1w3i_A 81 IRLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVSP-HPVYLYNYP---TATGKDIDAKVAKE 146 (293)
T ss_dssp HHHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHCS-SCEEEEECH---HHHSCCCCHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhCC-CCEEEEECc---hhhCcCCCHHHHHh
Confidence 99999999999999877432 3555555 4455554 57543 431 112 1478888877
No 72
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=97.22 E-value=0.015 Score=55.58 Aligned_cols=202 Identities=14% Similarity=0.159 Sum_probs=110.0
Q ss_pred HHHHHHHHhCCCce----EecccCChH----HHHHHHHhCCcEEEecc-HH--------H-HhhhccCCCCCCCCHHHHH
Q 012478 78 AKSLRQILELPGVH----QGPACFDAL----SAKLVEKSGFSFCFTSG-FS--------I-SAARLALPDTGFISYGEMV 139 (462)
Q Consensus 78 a~~LR~ll~~~~~i----v~p~ayDal----SArl~e~aGfdaI~vSG-~a--------v-Sas~lG~PD~g~vsl~Eml 139 (462)
.+.|.++.+++++. +++|-.|.- -++.++++|+|+|-++. +. + .++...+ . ..++.++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al-~-~g~~~~~~~ 83 (262)
T 1rd5_A 6 SDTMAALMAKGKTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARAL-A-SGTTMDAVL 83 (262)
T ss_dssp HHHHHHHHHTTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHH-T-TTCCHHHHH
T ss_pred HHHHHHHHhcCCceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHH-H-cCCCHHHHH
Confidence 45666666555542 233333222 25666788999998852 11 0 0000000 1 226889999
Q ss_pred HHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHH
Q 012478 140 DQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARK 219 (462)
Q Consensus 140 ~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~ 219 (462)
+.++.|.+.+++||++- +|-|+.. ...++.+.++|++||++-|... ++..+-+..+++
T Consensus 84 ~~i~~ir~~~~~Pv~~m---~~~~~~~-~~~~~~a~~aGadgv~v~d~~~---------------~~~~~~~~~~~~--- 141 (262)
T 1rd5_A 84 EMLREVTPELSCPVVLL---SYYKPIM-FRSLAKMKEAGVHGLIVPDLPY---------------VAAHSLWSEAKN--- 141 (262)
T ss_dssp HHHHHHGGGCSSCEEEE---CCSHHHH-SCCTHHHHHTTCCEEECTTCBT---------------TTHHHHHHHHHH---
T ss_pred HHHHHHHhcCCCCEEEE---ecCcHHH-HHHHHHHHHcCCCEEEEcCCCh---------------hhHHHHHHHHHH---
Confidence 99999998889999883 2444321 1123348889999999977531 122222222222
Q ss_pred hhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCC---C---------CHHHHHHHHHhCCCCceeeeeeec
Q 012478 220 ESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---A---------SKEEMKAFCEISPLVPKMANMLEG 287 (462)
Q Consensus 220 ~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~---~---------s~eei~~i~~~v~~vP~~~N~l~~ 287 (462)
.|-+.++. .+... . .+|.+++.+.+.+.+++.++ . ..+.++++.+..+ +|+.+ +
T Consensus 142 -~g~~~i~~-~a~~t---~----~e~~~~~~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~~~-~pI~v----g 207 (262)
T 1rd5_A 142 -NNLELVLL-TTPAI---P----EDRMKEITKASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVTN-KPVAV----G 207 (262)
T ss_dssp -TTCEECEE-ECTTS---C----HHHHHHHHHHCCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHHCS-SCEEE----E
T ss_pred -cCCceEEE-ECCCC---C----HHHHHHHHhcCCCeEEEecCCCCCCCCcCCCchHHHHHHHHHhhcC-CeEEE----E
Confidence 23333222 22211 1 23566666667766665332 1 1235666666553 56542 3
Q ss_pred CCCCCCCCHHHHHhcCCCEEeccchHHHHH
Q 012478 288 GGKTPILNPLELEELGFKLVAYPLSLIGVS 317 (462)
Q Consensus 288 ~g~tP~ls~~eL~~lGv~~V~yp~~ll~aa 317 (462)
+|-.-.-+..++.++|.+.|+.++.++...
T Consensus 208 GGI~~~e~~~~~~~~GAdgvvVGSai~~~~ 237 (262)
T 1rd5_A 208 FGISKPEHVKQIAQWGADGVIIGSAMVRQL 237 (262)
T ss_dssp SCCCSHHHHHHHHHTTCSEEEECHHHHHHH
T ss_pred CCcCCHHHHHHHHHcCCCEEEEChHHHhHH
Confidence 343211245667778999999999877654
No 73
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=97.18 E-value=0.0018 Score=64.44 Aligned_cols=123 Identities=16% Similarity=0.209 Sum_probs=85.0
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++||.+ ||.++.-...+.+|..+-+++++++. ...-|++=+- ..+.+++
T Consensus 27 D~~~l~~lv~~li~~Gv~Gl~v--------~GtTGE~~~Lt~~Er~~v~~~~v~~~----grvpViaGvg---~~~t~~a 91 (313)
T 3dz1_A 27 DDVSIDRLTDFYAEVGCEGVTV--------LGILGEAPKLDAAEAEAVATRFIKRA----KSMQVIVGVS---APGFAAM 91 (313)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEE--------STGGGTGGGSCHHHHHHHHHHHHHHC----TTSEEEEECC---CSSHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEe--------CccCcChhhCCHHHHHHHHHHHHHHc----CCCcEEEecC---CCCHHHH
Confidence 5678889999999999999988 66666667888999888888888775 2566666553 3467999
Q ss_pred HHHHHHhHhcCCcEEEecCC---CCHHHHH----HHHHhCC-CCcee-eeeeecCCCCCCCCHHHHHhc
Q 012478 243 LRRSRAFADAGADVLFIDAL---ASKEEMK----AFCEISP-LVPKM-ANMLEGGGKTPILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~---~s~eei~----~i~~~v~-~vP~~-~N~l~~~g~tP~ls~~eL~~l 302 (462)
|+.++.++++|||++++-.+ ++.+++. ++++.++ .+|++ .|+=...| -.++++.+.+|
T Consensus 92 i~la~~A~~~Gadavlv~~P~~~~s~~~l~~~f~~va~a~~~~lPiilYn~P~~tg--~~l~~~~~~~L 158 (313)
T 3dz1_A 92 RRLARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQATEAIGDDVPWVLQDYPLTLS--VVMTPKVIRQI 158 (313)
T ss_dssp HHHHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHHHCTTSCEEEEECHHHHC--CCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHhCCCCCcEEEEeCccccC--cCCCHHHHHHH
Confidence 99999999999999987432 3555544 4445554 25653 34311101 14666655544
No 74
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=97.17 E-value=0.0015 Score=64.99 Aligned_cols=122 Identities=18% Similarity=0.248 Sum_probs=84.7
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++||.+ ||+++.-...+.+|..+-+++++++.. ...-|++-+- ..+.+|+
T Consensus 26 D~~~l~~lv~~li~~Gv~Gl~v--------~GtTGE~~~Ls~~Er~~v~~~~~~~~~---grvpViaGvg---~~~t~~a 91 (311)
T 3h5d_A 26 NFDAIPALIEHLLAHHTDGILL--------AGTTAESPTLTHDEELELFAAVQKVVN---GRVPLIAGVG---TNDTRDS 91 (311)
T ss_dssp CTTHHHHHHHHHHHTTCCCEEE--------SSTTTTGGGSCHHHHHHHHHHHHHHSC---SSSCEEEECC---CSSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEeCC---CcCHHHH
Confidence 4467888899999999999998 677777778899999888888887753 4565666543 3467899
Q ss_pred HHHHHHhHhcCC-cEEEecCC----CCHHHHHHH----HHhCCCCcee-eeeeecCCCC-CCCCHHHHHhc
Q 012478 243 LRRSRAFADAGA-DVLFIDAL----ASKEEMKAF----CEISPLVPKM-ANMLEGGGKT-PILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGA-D~Ifie~~----~s~eei~~i----~~~v~~vP~~-~N~l~~~g~t-P~ls~~eL~~l 302 (462)
|+.++.++++|| |++++-.+ ++.+++.+. ++..+ +|++ .|+ + +.| -.++++.+.+|
T Consensus 92 i~la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~-P--~~tg~~l~~~~~~~L 158 (311)
T 3h5d_A 92 IEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADASD-LPIIIYNI-P--GRVVVELTPETMLRL 158 (311)
T ss_dssp HHHHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSCS-SCEEEEEC-H--HHHSSCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhCC-CCEEEEec-c--cccCCCCCHHHHHHH
Confidence 999999999997 99877543 455555444 44443 5654 343 1 111 14666665554
No 75
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=97.17 E-value=0.052 Score=53.28 Aligned_cols=199 Identities=16% Similarity=0.099 Sum_probs=119.4
Q ss_pred HHHHHHHHhCCCceEe--cccCCh---HH---HHHHHHhCCcEEEec-cH--H------HHh-hhccCCCCCCCCHHHHH
Q 012478 78 AKSLRQILELPGVHQG--PACFDA---LS---AKLVEKSGFSFCFTS-GF--S------ISA-ARLALPDTGFISYGEMV 139 (462)
Q Consensus 78 a~~LR~ll~~~~~iv~--p~ayDa---lS---Arl~e~aGfdaI~vS-G~--a------vSa-s~lG~PD~g~vsl~Eml 139 (462)
.+.|.++.+++++..+ ..+-|+ .+ ++.++++|+|+|=++ -+ - +-. +..-+ . .-+++++.+
T Consensus 8 ~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL-~-~G~~~~~~~ 85 (271)
T 3nav_A 8 QALFQRLSAAQQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRAL-A-AKTTPDICF 85 (271)
T ss_dssp HHHHHHHHHTTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHH-H-TTCCHHHHH
T ss_pred HHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHH-H-cCCCHHHHH
Confidence 4567777777664322 244553 23 344567899999887 22 1 100 00001 0 127888999
Q ss_pred HHHHHHHhh-cCCcEEEeCCCCCCCHH---HHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHH
Q 012478 140 DQGQLITQA-VSIPVIGDGDNGYGNAM---NVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAV 215 (462)
Q Consensus 140 ~~~~~I~ra-~~iPVIaD~DtGyG~~~---nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~ 215 (462)
+.++.+.+. .++||++= ||-|+. .+.+-++.+.++|++|+.+=|-. .||..+-++++.
T Consensus 86 ~~v~~~r~~~~~~Pivlm---~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp---------------~ee~~~~~~~~~ 147 (271)
T 3nav_A 86 ELIAQIRARNPETPIGLL---MYANLVYARGIDDFYQRCQKAGVDSVLIADVP---------------TNESQPFVAAAE 147 (271)
T ss_dssp HHHHHHHHHCTTSCEEEE---ECHHHHHHTCHHHHHHHHHHHTCCEEEETTSC---------------GGGCHHHHHHHH
T ss_pred HHHHHHHhcCCCCCEEEE---ecCcHHHHHhHHHHHHHHHHCCCCEEEECCCC---------------HHHHHHHHHHHH
Confidence 999999876 78999874 777762 24667899999999999997742 244333333332
Q ss_pred HHHHhhCCCe-EEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCC------CC------HHHHHHHHHhCCCCceee
Q 012478 216 DARKESGSDI-VIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL------AS------KEEMKAFCEISPLVPKMA 282 (462)
Q Consensus 216 ~Ar~~~g~d~-vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~------~s------~eei~~i~~~v~~vP~~~ 282 (462)
+ .|.++ ++++=|.. .+|.+...+.+.+.|+.-+. .+ .+.++++.+..+ +|+.+
T Consensus 148 ~----~gl~~I~lvap~t~---------~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~-~Pv~v 213 (271)
T 3nav_A 148 K----FGIQPIFIAPPTAS---------DETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQFDA-PPALL 213 (271)
T ss_dssp H----TTCEEEEEECTTCC---------HHHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHHTTC-CCEEE
T ss_pred H----cCCeEEEEECCCCC---------HHHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHHhcC-CCEEE
Confidence 2 24444 34544332 25888888888888887332 11 233455544443 56543
Q ss_pred eeeecCCCCCCCCHHHHH---hcCCCEEeccchHHHHH
Q 012478 283 NMLEGGGKTPILNPLELE---ELGFKLVAYPLSLIGVS 317 (462)
Q Consensus 283 N~l~~~g~tP~ls~~eL~---~lGv~~V~yp~~ll~aa 317 (462)
.+ |- -++++.+ +.|..-|+.|+.+.+..
T Consensus 214 ---Gf-GI---st~e~~~~~~~~gADgvIVGSAiv~~i 244 (271)
T 3nav_A 214 ---GF-GI---SEPAQVKQAIEAGAAGAISGSAVVKII 244 (271)
T ss_dssp ---CS-SC---CSHHHHHHHHHTTCSEEEESHHHHHHH
T ss_pred ---EC-CC---CCHHHHHHHHHcCCCEEEECHHHHHHH
Confidence 22 32 1456555 78999999999887654
No 76
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.16 E-value=0.021 Score=65.05 Aligned_cols=205 Identities=14% Similarity=0.089 Sum_probs=121.5
Q ss_pred cCChHHHHHHHHhCCcEEEeccHHHHhhhccCCC----------------C---------CCCCHHHHHHHHHHHHhhc-
Q 012478 96 CFDALSAKLVEKSGFSFCFTSGFSISAARLALPD----------------T---------GFISYGEMVDQGQLITQAV- 149 (462)
Q Consensus 96 ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD----------------~---------g~vsl~Eml~~~~~I~ra~- 149 (462)
.++.-.++.+..+|+-++.+.++......+|.|. . ..-+++.+....+.+.+..
T Consensus 554 ~~~~~~~~~~~~~g~G~vv~~t~~~~~~~~gn~~pr~~~~~~~g~~~~~~~~~~~n~e~~~~~~~~~~~~~i~~~~~~~~ 633 (1025)
T 1gte_A 554 TTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFP 633 (1025)
T ss_dssp GSSHHHHHHHHHHTCSEEECCCBCCGGGCCCCCSSCEEECCTTCSCCSSCCSCEEECCCSCSSCHHHHHHHHHHHHHHCT
T ss_pred CCCHHHHHHHHHCCcCeEEeceecccccccCCCCccEEeccccccccCCchhheeeeccccchhHHHHHHHHHHHHhcCC
Confidence 4455667777888998887665442211112221 0 1124556666666666554
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCC-CCCcc-cCHHHHHHHHHHHHHHHHhhCCCeEE
Q 012478 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHT-RGRKV-VSREEAVMRIKAAVDARKESGSDIVI 227 (462)
Q Consensus 150 ~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~-~gk~L-vp~ee~~~kI~AA~~Ar~~~g~d~vI 227 (462)
+.|+++-.=.| .+.....+.+++++++|+++|.|-=.. |...+.. .|-.+ ...+...+-|++++++. +..+++
T Consensus 634 ~~~~i~~i~~g-~~~~~~~~~a~~~~~~g~d~iein~~~-P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~---~~Pv~v 708 (1025)
T 1gte_A 634 DNIVIASIMCS-YNKNDWMELSRKAEASGADALELNLSC-PHGMGERGMGLACGQDPELVRNICRWVRQAV---QIPFFA 708 (1025)
T ss_dssp TSEEEEEECCC-SCHHHHHHHHHHHHHTTCSEEEEECCC-BCCCC-----SBGGGCHHHHHHHHHHHHHHC---SSCEEE
T ss_pred CCCeEEEecCC-CCHHHHHHHHHHHHhcCCCEEEEECCC-CCCCCCCCcccccccCHHHHHHHHHHHHHhh---CCceEE
Confidence 68888876444 257788888999999999999995432 2211110 11122 35555566666665543 234555
Q ss_pred EEecchhhcccHHHHHHHHHHhHhcCCcEEEe----------------------cCC---------CC----HHHHHHHH
Q 012478 228 VARTDSRQALSLEESLRRSRAFADAGADVLFI----------------------DAL---------AS----KEEMKAFC 272 (462)
Q Consensus 228 iARTDA~~~~gldeAI~RakAy~eAGAD~Ifi----------------------e~~---------~s----~eei~~i~ 272 (462)
--+.|. ++..+-++++.++|||+|.+ ++. .. .+.+.++.
T Consensus 709 K~~~~~------~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~ 782 (1025)
T 1gte_A 709 KLTPNV------TDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIA 782 (1025)
T ss_dssp EECSCS------SCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHH
T ss_pred EeCCCh------HHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHH
Confidence 444432 24555688889999999988 221 01 25677888
Q ss_pred HhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012478 273 EISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 273 ~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
+.++.+|++.| ||-.-.-+..++-++|...|..+..++.
T Consensus 783 ~~~~~ipvi~~----GGI~s~~da~~~l~~Ga~~v~vg~~~l~ 821 (1025)
T 1gte_A 783 RALPGFPILAT----GGIDSAESGLQFLHSGASVLQVCSAVQN 821 (1025)
T ss_dssp HHSTTCCEEEE----SSCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHcCCCCEEEe----cCcCCHHHHHHHHHcCCCEEEEeecccc
Confidence 88755776644 3432222344555589999998887665
No 77
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=97.12 E-value=0.052 Score=49.36 Aligned_cols=151 Identities=21% Similarity=0.216 Sum_probs=90.3
Q ss_pred HHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHH---HHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHh
Q 012478 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQ---GQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKA 177 (462)
Q Consensus 101 SArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~---~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~A 177 (462)
.++.+.++|+++|-+. .|+ .+..++.+. ++.+++..++||+++- .++.+.++
T Consensus 31 ~~~~~~~~G~~~i~l~----------~~~---~~~~~~~~~~~~l~~~~~~~~v~v~v~~------------~~~~a~~~ 85 (215)
T 1xi3_A 31 SVREALEGGATAIQMR----------IKN---APTREMYEIGKTLRQLTREYDALFFVDD------------RVDVALAV 85 (215)
T ss_dssp HHHHHHHTTCSEEEEC----------CCS---CCHHHHHHHHHHHHHHHHHTTCEEEEES------------CHHHHHHH
T ss_pred HHHHHHHCCCCEEEEC----------CCC---CCHHHHHHHHHHHHHHHHHcCCeEEEcC------------hHHHHHHc
Confidence 3566778899988654 222 345444444 4444555678999861 23567789
Q ss_pred CccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEE
Q 012478 178 GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVL 257 (462)
Q Consensus 178 GaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~I 257 (462)
|+++|+++.... +.+ .+.++ . .+.++...+ ...+|+ ..+.++|+|.|
T Consensus 86 gad~v~l~~~~~-------------~~~-~~~~~---~-------~~~~~~v~~-----~t~~e~----~~~~~~g~d~i 132 (215)
T 1xi3_A 86 DADGVQLGPEDM-------------PIE-VAKEI---A-------PNLIIGASV-----YSLEEA----LEAEKKGADYL 132 (215)
T ss_dssp TCSEEEECTTSC-------------CHH-HHHHH---C-------TTSEEEEEE-----SSHHHH----HHHHHHTCSEE
T ss_pred CCCEEEECCccC-------------CHH-HHHHh---C-------CCCEEEEec-----CCHHHH----HHHHhcCCCEE
Confidence 999999975321 222 22222 1 133333222 223442 33567899999
Q ss_pred EecCC-----------CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012478 258 FIDAL-----------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 258 fie~~-----------~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
++..+ .+.+.++++.+.++ +|+++ .||-+| -+..++.++|+..|..+..++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~-~pvia----~GGI~~-~nv~~~~~~Ga~gv~vgs~i~~ 195 (215)
T 1xi3_A 133 GAGSVFPTKTKEDARVIGLEGLRKIVESVK-IPVVA----IGGINK-DNAREVLKTGVDGIAVISAVMG 195 (215)
T ss_dssp EEECSSCC----CCCCCHHHHHHHHHHHCS-SCEEE----ESSCCT-TTHHHHHTTTCSEEEESHHHHT
T ss_pred EEcCCccCCCCCCCCCcCHHHHHHHHHhCC-CCEEE----ECCcCH-HHHHHHHHcCCCEEEEhHHHhC
Confidence 87431 23567777777653 55432 245553 4788899999999999987765
No 78
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=97.09 E-value=0.011 Score=54.64 Aligned_cols=165 Identities=18% Similarity=0.157 Sum_probs=94.6
Q ss_pred HHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCC---CC-HHHHHHHHHHHHH
Q 012478 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGY---GN-AMNVKRTVKGYIK 176 (462)
Q Consensus 101 SArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGy---G~-~~nv~rtVk~l~~ 176 (462)
.|+.++++|++.+-+. + .+.++.|++.+++|++.+.-..| +- ...-.+.++.+.+
T Consensus 28 ~a~~~~~~Ga~~i~~~-----------------~----~~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~ 86 (223)
T 1y0e_A 28 MALAAYEGGAVGIRAN-----------------T----KEDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIE 86 (223)
T ss_dssp HHHHHHHHTCSEEEEE-----------------S----HHHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHH
T ss_pred HHHHHHHCCCeeeccC-----------------C----HHHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHh
Confidence 3456677899988542 1 24467777888999987543322 10 0012344667888
Q ss_pred hCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcE
Q 012478 177 AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADV 256 (462)
Q Consensus 177 AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~ 256 (462)
+|++.|+|--... + .+-.+..+++++++.. . +++.+..... ..+| ++.+.++|+|.
T Consensus 87 ~Gad~v~l~~~~~-----~---~p~~~~~~~i~~~~~~------~-~~~~v~~~~~-----t~~e----~~~~~~~G~d~ 142 (223)
T 1y0e_A 87 SQCEVIALDATLQ-----Q---RPKETLDELVSYIRTH------A-PNVEIMADIA-----TVEE----AKNAARLGFDY 142 (223)
T ss_dssp HTCSEEEEECSCS-----C---CSSSCHHHHHHHHHHH------C-TTSEEEEECS-----SHHH----HHHHHHTTCSE
T ss_pred CCCCEEEEeeecc-----c---CcccCHHHHHHHHHHh------C-CCceEEecCC-----CHHH----HHHHHHcCCCE
Confidence 9999999843210 0 0102334555554432 2 3555554332 2343 45578999999
Q ss_pred EEecC--C-----------CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012478 257 LFIDA--L-----------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 257 Ifie~--~-----------~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
|.+-. . ...+.++++.+.+. +|+.+ .||-.-.-+..++.++|+..|..+..++.
T Consensus 143 i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~-ipvia----~GGI~~~~~~~~~~~~Gad~v~vG~al~~ 209 (223)
T 1y0e_A 143 IGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVD-AKVIA----EGNVITPDMYKRVMDLGVHCSVVGGAITR 209 (223)
T ss_dssp EECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCC-SEEEE----ESSCCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred EEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCC-CCEEE----ecCCCCHHHHHHHHHcCCCEEEEChHHcC
Confidence 97521 1 12346677777664 56543 23431112457788889999999987665
No 79
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=97.04 E-value=0.0042 Score=58.45 Aligned_cols=173 Identities=12% Similarity=0.097 Sum_probs=100.7
Q ss_pred HHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012478 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (462)
Q Consensus 101 SArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaa 180 (462)
.|+.++++|+++|.++....+ ..+.+ ..++.++.|+ .+++||++.. |.-+... ++.+.++||+
T Consensus 35 ~a~~~~~~Gad~i~v~d~~~~--~~~~~--------~~~~~i~~i~-~~~ipvi~~G--gi~~~~~----~~~~~~~Gad 97 (241)
T 1qo2_A 35 LVEKLIEEGFTLIHVVDLSNA--IENSG--------ENLPVLEKLS-EFAEHIQIGG--GIRSLDY----AEKLRKLGYR 97 (241)
T ss_dssp HHHHHHHTTCCCEEEEEHHHH--HHCCC--------TTHHHHHHGG-GGGGGEEEES--SCCSHHH----HHHHHHTTCC
T ss_pred HHHHHHHcCCCEEEEeccccc--ccCCc--------hhHHHHHHHH-hcCCcEEEEC--CCCCHHH----HHHHHHCCCC
Confidence 467788899999999864322 11111 1145566777 6789999974 3444443 3455668999
Q ss_pred EEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEE---EecchhhcccHH-----HHHHHHHHhHhc
Q 012478 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV---ARTDSRQALSLE-----ESLRRSRAFADA 252 (462)
Q Consensus 181 GI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIi---ARTDA~~~~gld-----eAI~RakAy~eA 252 (462)
+|++-... +-.+ +.+.++ +..+ +.+++ .|.......+.+ ...++++.+.++
T Consensus 98 ~V~lg~~~------------l~~p-~~~~~~-------~~~g-~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~ 156 (241)
T 1qo2_A 98 RQIVSSKV------------LEDP-SFLKSL-------REID-VEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEY 156 (241)
T ss_dssp EEEECHHH------------HHCT-THHHHH-------HTTT-CEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHTT
T ss_pred EEEECchH------------hhCh-HHHHHH-------HHcC-CcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHhC
Confidence 99984432 1111 122222 1123 33333 221001111111 346678888899
Q ss_pred CCcEEEecCC--------CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhc-----C-CCEEeccchHHHH
Q 012478 253 GADVLFIDAL--------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEEL-----G-FKLVAYPLSLIGV 316 (462)
Q Consensus 253 GAD~Ifie~~--------~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~l-----G-v~~V~yp~~ll~a 316 (462)
|++.|++... .+.+.++++.+.++ +|+.++ +|-...-...++.++ | +.-|+.+..++..
T Consensus 157 G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~~-iPvia~----GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal~~~ 229 (241)
T 1qo2_A 157 GLEEIVHTEIEKDGTLQEHDFSLTKKIAIEAE-VKVLAA----GGISSENSLKTAQKVHTETNGLLKGVIVGRAFLEG 229 (241)
T ss_dssp TCCEEEEEETTHHHHTCCCCHHHHHHHHHHHT-CEEEEE----SSCCSHHHHHHHHHHHHHTTTSEEEEEECHHHHTT
T ss_pred CCCEEEEEeecccccCCcCCHHHHHHHHHhcC-CcEEEE----CCCCCHHHHHHHHhcccccCCeEeEEEeeHHHHcC
Confidence 9999998653 35678888888764 566543 343211245667777 9 9999998876643
No 80
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=97.00 E-value=0.028 Score=51.47 Aligned_cols=143 Identities=16% Similarity=0.190 Sum_probs=86.8
Q ss_pred HHHHHHHhh-cCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHH
Q 012478 140 DQGQLITQA-VSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDAR 218 (462)
Q Consensus 140 ~~~~~I~ra-~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar 218 (462)
+.++.|.+. .++||.+|.=.-++. ...++.+.++||++|.+=+.. . ++... .++++.
T Consensus 42 ~~i~~ir~~~~~~~i~~~~~~~~~~----~~~~~~~~~~Gad~v~v~~~~--------------~-~~~~~---~~~~~~ 99 (211)
T 3f4w_A 42 NAIKAIKEKYPHKEVLADAKIMDGG----HFESQLLFDAGADYVTVLGVT--------------D-VLTIQ---SCIRAA 99 (211)
T ss_dssp HHHHHHHHHCTTSEEEEEEEECSCH----HHHHHHHHHTTCSEEEEETTS--------------C-HHHHH---HHHHHH
T ss_pred HHHHHHHHhCCCCEEEEEEEeccch----HHHHHHHHhcCCCEEEEeCCC--------------C-hhHHH---HHHHHH
Confidence 455666665 579987664433332 123788899999999994431 1 22222 222222
Q ss_pred HhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecC--------CCCHHHHHHHHHhCCCCceeeeeeecCCC
Q 012478 219 KESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDA--------LASKEEMKAFCEISPLVPKMANMLEGGGK 290 (462)
Q Consensus 219 ~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~--------~~s~eei~~i~~~v~~vP~~~N~l~~~g~ 290 (462)
++.|...++ . .... ++.+++++.+.++|+|.|.+.. ....+.++++.+.++.+|+. ..+|-
T Consensus 100 ~~~g~~~~v-~---~~~~---~t~~~~~~~~~~~g~d~i~v~~g~~g~~~~~~~~~~i~~l~~~~~~~~i~----~~gGI 168 (211)
T 3f4w_A 100 KEAGKQVVV-D---MICV---DDLPARVRLLEEAGADMLAVHTGTDQQAAGRKPIDDLITMLKVRRKARIA----VAGGI 168 (211)
T ss_dssp HHHTCEEEE-E---CTTC---SSHHHHHHHHHHHTCCEEEEECCHHHHHTTCCSHHHHHHHHHHCSSCEEE----EESSC
T ss_pred HHcCCeEEE-E---ecCC---CCHHHHHHHHHHcCCCEEEEcCCCcccccCCCCHHHHHHHHHHcCCCcEE----EECCC
Confidence 323433332 1 1111 1235688899999999988741 12567888888876544442 23454
Q ss_pred CCCCCHHHHHhcCCCEEeccchHHHH
Q 012478 291 TPILNPLELEELGFKLVAYPLSLIGV 316 (462)
Q Consensus 291 tP~ls~~eL~~lGv~~V~yp~~ll~a 316 (462)
+| -+..++.++|+..++.+..++.+
T Consensus 169 ~~-~~~~~~~~~Gad~vvvGsai~~~ 193 (211)
T 3f4w_A 169 SS-QTVKDYALLGPDVVIVGSAITHA 193 (211)
T ss_dssp CT-TTHHHHHTTCCSEEEECHHHHTC
T ss_pred CH-HHHHHHHHcCCCEEEECHHHcCC
Confidence 43 47889999999999999887753
No 81
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=96.99 E-value=0.051 Score=53.12 Aligned_cols=196 Identities=14% Similarity=0.093 Sum_probs=115.2
Q ss_pred HHHHHHhCCCc----eEecccCChH----HHHHHHHhCCcEEEecc-HH---------HHhhhccCCCCCCCCHHHHHHH
Q 012478 80 SLRQILELPGV----HQGPACFDAL----SAKLVEKSGFSFCFTSG-FS---------ISAARLALPDTGFISYGEMVDQ 141 (462)
Q Consensus 80 ~LR~ll~~~~~----iv~p~ayDal----SArl~e~aGfdaI~vSG-~a---------vSas~lG~PD~g~vsl~Eml~~ 141 (462)
.|.++.+++++ ++++|--|.- -++.++++ +|+|-++. +. ..++..-+ . .-++++.+++.
T Consensus 6 ~f~~~~~~~~~~li~~i~~GdP~~~~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al-~-~G~~~~~~~~~ 82 (271)
T 1ujp_A 6 AFAKARSEGRAALIPYLTAGFPSREGFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELAL-R-KGMSVQGALEL 82 (271)
T ss_dssp HHHHHHHTTBCEEEEEEETTSSCHHHHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHH-H-TTCCHHHHHHH
T ss_pred HHHHHHHcCCceEEEEecCCCCChHHHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHH-H-cCCCHHHHHHH
Confidence 56666655553 3445555543 22445567 99998872 21 00000000 0 11789999999
Q ss_pred HHHHHhhcCCcEEEeCCCCCCCHH---HHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHH
Q 012478 142 GQLITQAVSIPVIGDGDNGYGNAM---NVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDAR 218 (462)
Q Consensus 142 ~~~I~ra~~iPVIaD~DtGyG~~~---nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar 218 (462)
++.|.+..++||++ + +|-|+. .+.+-++.+.++|++|+.+=|-. .+|..+-++++++.
T Consensus 83 v~~ir~~~~~Pii~-m--~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~---------------~ee~~~~~~~~~~~- 143 (271)
T 1ujp_A 83 VREVRALTEKPLFL-M--TYLNPVLAWGPERFFGLFKQAGATGVILPDLP---------------PDEDPGLVRLAQEI- 143 (271)
T ss_dssp HHHHHHHCCSCEEE-E--CCHHHHHHHCHHHHHHHHHHHTCCEEECTTCC---------------GGGCHHHHHHHHHH-
T ss_pred HHHHHhcCCCCEEE-E--ecCcHHHHhhHHHHHHHHHHcCCCEEEecCCC---------------HHHHHHHHHHHHHc-
Confidence 99999888899999 3 776642 34566888899999999986642 13333333333322
Q ss_pred HhhCCC-eEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCC------C------CHHHHHHHHHhCCCCceeeeee
Q 012478 219 KESGSD-IVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL------A------SKEEMKAFCEISPLVPKMANML 285 (462)
Q Consensus 219 ~~~g~d-~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~------~------s~eei~~i~~~v~~vP~~~N~l 285 (462)
|-+ +.+++-|.. .+|.+++.+.+...+|+.++ . ..+.++++.+.. .+|+.+
T Consensus 144 ---gl~~i~liap~s~---------~eri~~ia~~~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~-~~Pv~v--- 207 (271)
T 1ujp_A 144 ---GLETVFLLAPTST---------DARIATVVRHATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKART-ALPVAV--- 207 (271)
T ss_dssp ---TCEEECEECTTCC---------HHHHHHHHTTCCSCEEEECC------------CCHHHHHHHHTTC-CSCEEE---
T ss_pred ---CCceEEEeCCCCC---------HHHHHHHHHhCCCCEEEEecCcccCCCCCCCccHHHHHHHHHhhc-CCCEEE---
Confidence 322 344544432 24777777777777766422 1 135666666654 356542
Q ss_pred ecCCCCCCCCHHHHHh-cCCCEEeccchHHHHH
Q 012478 286 EGGGKTPILNPLELEE-LGFKLVAYPLSLIGVS 317 (462)
Q Consensus 286 ~~~g~tP~ls~~eL~~-lGv~~V~yp~~ll~aa 317 (462)
.+ |-. +.++.++ .|..-|+.|+.+.+..
T Consensus 208 Gf-GI~---t~e~a~~~~~ADgVIVGSAi~~~~ 236 (271)
T 1ujp_A 208 GF-GVS---GKATAAQAAVADGVVVGSALVRAL 236 (271)
T ss_dssp ES-CCC---SHHHHHHHTTSSEEEECHHHHHHH
T ss_pred Ec-CCC---CHHHHHHhcCCCEEEEChHHhccc
Confidence 33 421 3554444 7899999999877654
No 82
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=96.97 E-value=0.019 Score=58.64 Aligned_cols=140 Identities=9% Similarity=0.053 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHhCccEEEeCCCC--------CC---CCCCCCCCCcccC-HHHHHHHHHHHHHHHHhhCCCeEEEEecc
Q 012478 165 MNVKRTVKGYIKAGFAGIILEDQV--------SP---KGCGHTRGRKVVS-REEAVMRIKAAVDARKESGSDIVIVARTD 232 (462)
Q Consensus 165 ~nv~rtVk~l~~AGaaGI~IEDq~--------~P---KrCGH~~gk~Lvp-~ee~~~kI~AA~~Ar~~~g~d~vIiARTD 232 (462)
....+.++..+++|++||.|-... .| ||...-+|- +.. .+-..+.|++++++. |++ .|..|.-
T Consensus 166 ~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGs-lenR~r~~~eiv~aVr~av---g~~-~v~vrls 240 (377)
T 2r14_A 166 EDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGS-IENRARFPLEVVDAVAEVF---GPE-RVGIRLT 240 (377)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSS-HHHHHHHHHHHHHHHHHHH---CGG-GEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcc-hhhchHHHHHHHHHHHHHc---CCC-cEEEEec
Confidence 355677788889999999996542 12 333222332 211 122344455555443 444 4555632
Q ss_pred hh-------hcccHHHHHHHHHHhHhcCCcEEEecCCC--------CHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHH
Q 012478 233 SR-------QALSLEESLRRSRAFADAGADVLFIDALA--------SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPL 297 (462)
Q Consensus 233 A~-------~~~gldeAI~RakAy~eAGAD~Ifie~~~--------s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~ 297 (462)
.. ....++++++-+++++++|+|.|-+..-. ..+.++++.+.++ +|++.| ++-+| -..+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~-iPvi~~----Ggi~~-~~a~ 314 (377)
T 2r14_A 241 PFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFK-GGLIYC----GNYDA-GRAQ 314 (377)
T ss_dssp TTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCC-SEEEEE----SSCCH-HHHH
T ss_pred cccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCC-CCEEEE----CCCCH-HHHH
Confidence 21 12347889999999999999999875421 2345677777775 576654 23221 1234
Q ss_pred HHHhcC-CCEEeccchHHH
Q 012478 298 ELEELG-FKLVAYPLSLIG 315 (462)
Q Consensus 298 eL~~lG-v~~V~yp~~ll~ 315 (462)
++-+-| +..|.++-.++.
T Consensus 315 ~~l~~g~aD~V~igR~~l~ 333 (377)
T 2r14_A 315 ARLDDNTADAVAFGRPFIA 333 (377)
T ss_dssp HHHHTTSCSEEEESHHHHH
T ss_pred HHHHCCCceEEeecHHHHh
Confidence 444555 889988776554
No 83
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=96.94 E-value=0.022 Score=57.84 Aligned_cols=140 Identities=19% Similarity=0.169 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHhCccEEEeCCCC--------CC---CCCCCCCCCcccC-HHHHHHHHHHHHHHHHhhCCCeEEEEecc
Q 012478 165 MNVKRTVKGYIKAGFAGIILEDQV--------SP---KGCGHTRGRKVVS-REEAVMRIKAAVDARKESGSDIVIVARTD 232 (462)
Q Consensus 165 ~nv~rtVk~l~~AGaaGI~IEDq~--------~P---KrCGH~~gk~Lvp-~ee~~~kI~AA~~Ar~~~g~d~vIiARTD 232 (462)
....+.++..+++|++||.|-... .| ||...-+|- +.. .+-..+.|++++++. |++ .|..|.-
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGs-lenr~r~~~eiv~avr~~v---g~~-~v~vrls 235 (364)
T 1vyr_A 161 NDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGS-VENRARLVLEVVDAVCNEW---SAD-RIGIRVS 235 (364)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSS-HHHHTHHHHHHHHHHHHHS---CGG-GEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcc-hhcChhhHHHHHHHHHHhc---CCC-cEEEEEc
Confidence 355667778889999999995531 12 232222231 211 122334445554443 444 4444433
Q ss_pred hh---h-----cccHHHHHHHHHHhHhcCCcEEEecCC-------CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHH
Q 012478 233 SR---Q-----ALSLEESLRRSRAFADAGADVLFIDAL-------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPL 297 (462)
Q Consensus 233 A~---~-----~~gldeAI~RakAy~eAGAD~Ifie~~-------~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~ 297 (462)
.. . ...++++++-+++++++|+|.|-+... ...+.++++.+.++ +|++.| ++-++ -..+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~~-iPvi~~----Ggit~-~~a~ 309 (364)
T 1vyr_A 236 PIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFH-GVIIGA----GAYTA-EKAE 309 (364)
T ss_dssp CSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCC-SEEEEE----SSCCH-HHHH
T ss_pred cccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHCC-CCEEEE----CCcCH-HHHH
Confidence 21 1 225778999999999999999987652 13456777878776 676654 23221 1234
Q ss_pred HHHhcC-CCEEeccchHHH
Q 012478 298 ELEELG-FKLVAYPLSLIG 315 (462)
Q Consensus 298 eL~~lG-v~~V~yp~~ll~ 315 (462)
++-+.| +..|.++-.++.
T Consensus 310 ~~l~~g~aD~V~~gR~~l~ 328 (364)
T 1vyr_A 310 DLIGKGLIDAVAFGRDYIA 328 (364)
T ss_dssp HHHHTTSCSEEEESHHHHH
T ss_pred HHHHCCCccEEEECHHHHh
Confidence 455556 899988876554
No 84
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=96.94 E-value=0.045 Score=54.65 Aligned_cols=196 Identities=12% Similarity=0.029 Sum_probs=110.5
Q ss_pred CCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhh---cCCcEEEeCCC---------------------CCCCH
Q 012478 109 GFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQA---VSIPVIGDGDN---------------------GYGNA 164 (462)
Q Consensus 109 GfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra---~~iPVIaD~Dt---------------------GyG~~ 164 (462)
|+-.|.+.+..++....++|..-.+--++.+...+.++++ .+.++++=+=. ++..+
T Consensus 52 G~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~~~~~~~vh~~g~~i~~QL~h~Gr~~~~~~~~~~pS~~~~~~~~~~p 131 (338)
T 1z41_A 52 QVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKLTEQVKEQGSKIGIQLAHAGRKAELEGDIFAPSAIAFDEQSATP 131 (338)
T ss_dssp TCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHHHHHHHHHHTTCEEEEEEECCGGGCCCSSCCEESSSCCSSTTSCCC
T ss_pred CCCEEEeCCeeccccccCCCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCcccCCCCCCcCCCCCCCCCCCCCC
Confidence 7877777665554333556654333334555555555432 23455544322 11222
Q ss_pred ------------HHHHHHHHHHHHhCccEEEeCCCC-----------CCCCCCCCCCCccc-CHHHHHHHHHHHHHHHHh
Q 012478 165 ------------MNVKRTVKGYIKAGFAGIILEDQV-----------SPKGCGHTRGRKVV-SREEAVMRIKAAVDARKE 220 (462)
Q Consensus 165 ------------~nv~rtVk~l~~AGaaGI~IEDq~-----------~PKrCGH~~gk~Lv-p~ee~~~kI~AA~~Ar~~ 220 (462)
....+.++.++++|++||.|--.. ..||...-+|- +. ..+-..+.|+|++++.
T Consensus 132 ~~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGs-lenr~r~~~eiv~avr~~v-- 208 (338)
T 1z41_A 132 VEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGS-PENRYRFLREIIDEVKQVW-- 208 (338)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSS-HHHHHHHHHHHHHHHHHHC--
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcc-hhhhHHHHHHHHHHHHHHc--
Confidence 345566788889999999996542 12333333332 21 1223445555555543
Q ss_pred hCCCeEEEEecchh----hcccHHHHHHHHHHhHhcCCcEEEecCC----------C--CHHHHHHHHHhCCCCceeeee
Q 012478 221 SGSDIVIVARTDSR----QALSLEESLRRSRAFADAGADVLFIDAL----------A--SKEEMKAFCEISPLVPKMANM 284 (462)
Q Consensus 221 ~g~d~vIiARTDA~----~~~gldeAI~RakAy~eAGAD~Ifie~~----------~--s~eei~~i~~~v~~vP~~~N~ 284 (462)
++-|..|.... .....+++++-++++.++|+|.|-+... + ..+.++++.+.+. +|++.|
T Consensus 209 ---~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~-iPVi~~- 283 (338)
T 1z41_A 209 ---DGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQAD-MATGAV- 283 (338)
T ss_dssp ---CSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHC-CEEEEC-
T ss_pred ---CCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCC-CCEEEE-
Confidence 45555564321 1235788999999999999999976431 1 2456777777764 576543
Q ss_pred eecCCCCCCCCHHHHHhcC-CCEEeccchHHH
Q 012478 285 LEGGGKTPILNPLELEELG-FKLVAYPLSLIG 315 (462)
Q Consensus 285 l~~~g~tP~ls~~eL~~lG-v~~V~yp~~ll~ 315 (462)
|+-.-.-..+++-+.| +..|.++-.++.
T Consensus 284 ---Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~ 312 (338)
T 1z41_A 284 ---GMITDGSMAEEILQNGRADLIFIGRELLR 312 (338)
T ss_dssp ---SSCCSHHHHHHHHHTTSCSEEEECHHHHH
T ss_pred ---CCCCCHHHHHHHHHcCCceEEeecHHHHh
Confidence 2321112345566677 999999876654
No 85
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=96.91 E-value=0.062 Score=53.60 Aligned_cols=186 Identities=15% Similarity=0.130 Sum_probs=97.2
Q ss_pred ChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHh
Q 012478 98 DALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKA 177 (462)
Q Consensus 98 DalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~A 177 (462)
|...|+.+.++|+.. .+|... + .+++. ......+..+. ...+.|+++-...||. +..+. +.+.++
T Consensus 75 ~~~~a~aa~~~G~~~-~~~~~~-~----~l~~~---~~~~~~~~~~~--~~~~~pv~~~i~~~~~-~~~~~---~~~~~~ 139 (349)
T 1p0k_A 75 NKSLARAASQAGIPL-AVGSQM-S----ALKDP---SERLSYEIVRK--ENPNGLIFANLGSEAT-AAQAK---EAVEMI 139 (349)
T ss_dssp HHHHHHHHHHHTCCE-ECCCCT-T----TTTCH---HHHHHHHHHHH--HCSSSCEEEEEETTCC-HHHHH---HHHHHT
T ss_pred HHHHHHHHHHcCCcE-Eeccch-h----cccCc---ccccceehhhh--hCCCceeEEeecCCCC-HHHHH---HHHHhc
Confidence 567789999999864 334321 1 12331 11111121111 2357999998877764 33333 345568
Q ss_pred CccEEEeCCCCCCCCCCCCCCCc-ccCHHHHHHHHHHHHHHHHhhCCCeEEEEe-cchhhcccHHHHHHHHHHhHhcCCc
Q 012478 178 GFAGIILEDQVSPKGCGHTRGRK-VVSREEAVMRIKAAVDARKESGSDIVIVAR-TDSRQALSLEESLRRSRAFADAGAD 255 (462)
Q Consensus 178 GaaGI~IEDq~~PKrCGH~~gk~-Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiAR-TDA~~~~gldeAI~RakAy~eAGAD 255 (462)
|+++|.|--.. |.......+.+ +-. ..+.|++++++. +.++++... .+ .. .+.++...++|||
T Consensus 140 gad~i~i~~~~-~~~~~~~~~~~~~~~---~~~~i~~vr~~~---~~Pv~vK~~~~~----~~----~~~a~~a~~~Gad 204 (349)
T 1p0k_A 140 GANALQIHLNV-IQEIVMPEGDRSFSG---ALKRIEQICSRV---SVPVIVKEVGFG----MS----KASAGKLYEAGAA 204 (349)
T ss_dssp TCSEEEEEECT-TTTC--------CTT---HHHHHHHHHHHC---SSCEEEEEESSC----CC----HHHHHHHHHHTCS
T ss_pred CCCeEEecccc-hhhhcCCCCCcchHH---HHHHHHHHHHHc---CCCEEEEecCCC----CC----HHHHHHHHHcCCC
Confidence 99997654321 21111111111 111 234444444432 345555442 11 11 2346788899999
Q ss_pred EEEecC-------------------------CCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEecc
Q 012478 256 VLFIDA-------------------------LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYP 310 (462)
Q Consensus 256 ~Ifie~-------------------------~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp 310 (462)
+|.+.. +++.+.+.++.+.++.+|++.+ +|-.-.-+..++-++|.+.|..+
T Consensus 205 ~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~----GGI~~~~d~~k~l~~GAd~V~iG 280 (349)
T 1p0k_A 205 AVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIAS----GGLQDALDVAKAIALGASCTGMA 280 (349)
T ss_dssp EEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEE----SSCCSHHHHHHHHHTTCSEEEEC
T ss_pred EEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEE----CCCCCHHHHHHHHHcCCCEEEEc
Confidence 998831 2334556777776644665433 34221123444455899999999
Q ss_pred chHHHHH
Q 012478 311 LSLIGVS 317 (462)
Q Consensus 311 ~~ll~aa 317 (462)
..++...
T Consensus 281 ~~~l~~~ 287 (349)
T 1p0k_A 281 GHFLKAL 287 (349)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9888763
No 86
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=96.89 E-value=0.015 Score=56.70 Aligned_cols=140 Identities=16% Similarity=0.170 Sum_probs=100.0
Q ss_pred CchHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhh-------hccCCC---CCC-CCHHHHHHHHH
Q 012478 75 LSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAA-------RLALPD---TGF-ISYGEMVDQGQ 143 (462)
Q Consensus 75 ~~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas-------~lG~PD---~g~-vsl~Eml~~~~ 143 (462)
...-+.|++..++-+..++-.+||..++..+++. ++.+.+++.-+-+. .+|.|= +|. .+++|+++.+.
T Consensus 73 ~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~-vd~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~Av~ 151 (262)
T 1zco_A 73 EKALRWMREAADEYGLVTVTEVMDTRHVELVAKY-SDILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAE 151 (262)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHHH-CSEEEECGGGTTCHHHHHHHTTSSSCEEEECCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHHhh-CCEEEECcccccCHHHHHHHHhcCCcEEEecCCCCCHHHHHHHHH
Confidence 3445677887777778888899999999999999 99999997554331 246663 344 38999988776
Q ss_pred HHHh----------------------------------hcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCC
Q 012478 144 LITQ----------------------------------AVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVS 189 (462)
Q Consensus 144 ~I~r----------------------------------a~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~ 189 (462)
.+.. ..++|||+|.+++-|...-+....+.....||.|+.||--..
T Consensus 152 ~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H~~ 231 (262)
T 1zco_A 152 YIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGRRSLVIPLAKAAYAIGADGIMVEVHPE 231 (262)
T ss_dssp HHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCSGGGHHHHHHHHHHTTCSEEEEEBCSS
T ss_pred HHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCccchHHHHHHHHHHcCCCEEEEEecCC
Confidence 6532 247899999999877643333445556689999999998755
Q ss_pred CCCCCCCCCCcccCHHHHHHHHHHHHH
Q 012478 190 PKGCGHTRGRKVVSREEAVMRIKAAVD 216 (462)
Q Consensus 190 PKrCGH~~gk~Lvp~ee~~~kI~AA~~ 216 (462)
|.+--. +|+.-++++|+.+-++.++.
T Consensus 232 ~d~al~-D~~~sl~p~~~~~l~~~i~~ 257 (262)
T 1zco_A 232 PEKALS-DSQQQLTFDDFLQLLKELEA 257 (262)
T ss_dssp GGGCSS-CTTTCBCHHHHHHHHHHHHH
T ss_pred ccccCC-hhhcCCCHHHHHHHHHHHHH
Confidence 433211 56666788888776666654
No 87
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=96.86 E-value=0.0015 Score=63.02 Aligned_cols=180 Identities=11% Similarity=0.125 Sum_probs=106.8
Q ss_pred HHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCC-CHHHHHHHHHHHHHhCcc
Q 012478 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYG-NAMNVKRTVKGYIKAGFA 180 (462)
Q Consensus 102 Arl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG-~~~nv~rtVk~l~~AGaa 180 (462)
.+.+.++|.|+|-+++ ...++++.+++.+++|.+ .++||+. .+|. |+. ++|++
T Consensus 26 ~~~l~~~GaD~IelG~------------S~g~t~~~~~~~v~~ir~-~~~Pivl---~~y~~n~i----------~~gvD 79 (234)
T 2f6u_A 26 IKAVADSGTDAVMISG------------TQNVTYEKARTLIEKVSQ-YGLPIVV---EPSDPSNV----------VYDVD 79 (234)
T ss_dssp HHHHHTTTCSEEEECC------------CTTCCHHHHHHHHHHHTT-SCCCEEE---CCSSCCCC----------CCCSS
T ss_pred HHHHHHcCCCEEEECC------------CCCCCHHHHHHHHHHhcC-CCCCEEE---ecCCcchh----------hcCCC
Confidence 3567789999999998 144889999999999988 8899998 6666 432 78999
Q ss_pred EEEeCCCCCCCCCCCCCCCcccCHHHHHHHH----HHHHHHHHhhC-CCeE-----EEEecch--h-h--cccHHHHHHH
Q 012478 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRI----KAAVDARKESG-SDIV-----IVARTDS--R-Q--ALSLEESLRR 245 (462)
Q Consensus 181 GI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI----~AA~~Ar~~~g-~d~v-----IiARTDA--~-~--~~gldeAI~R 245 (462)
|+.|=|=. +-.. ..++- ..+++-. +++.+....++ .+++ |++=+-. + . ....+ -+|
T Consensus 80 g~iipdLp-~ee~-----~~~~~-g~~~~~~~~~~~~~~~~g~~~~~l~~I~~gYil~~P~~~~~rl~~g~~~~~--~e~ 150 (234)
T 2f6u_A 80 YLFVPTVL-NSAD-----GDWIT-GKHAQWVRMHYENLQKFTEIIESEFIQIEGYIVLNPDSAVARVTKALCNID--KEL 150 (234)
T ss_dssp EEEEEEET-TBSB-----GGGTT-HHHHHHHHTTGGGHHHHHHHHHSTTEEEEEEEECCTTSHHHHHTTBCCCCC--HHH
T ss_pred EEEEcccC-CCCC-----HHHHh-hhHHHHHHhhhhhHHHcCCcccceeeeecceEEECCCCceEEeecCCCCCC--HHH
Confidence 99997743 1111 11110 1111111 11111110000 2322 3322210 0 0 00112 279
Q ss_pred HHHhHhcCC-----cEEEecC---CCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHHHH
Q 012478 246 SRAFADAGA-----DVLFIDA---LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVS 317 (462)
Q Consensus 246 akAy~eAGA-----D~Ifie~---~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~aa 317 (462)
+++|.++|+ -.|++++ ....+.++++.+....+|+. +.+|=++| =..+++.+ |+..|+.++.+...-
T Consensus 151 ~~~~a~~g~~~l~~~~Vyl~~~G~~~~~~~i~~i~~~~~~~Pv~---vGgGI~s~-e~a~~~~~-gAd~VIVGSa~v~~~ 225 (234)
T 2f6u_A 151 AASYALVGEKLFNLPIIYIEYSGTYGNPELVAEVKKVLDKARLF---YGGGIDSR-EKAREMLR-YADTIIVGNVIYEKG 225 (234)
T ss_dssp HHHHHHHHHHTTCCSEEEEECTTSCCCHHHHHHHHHHCSSSEEE---EESCCCSH-HHHHHHHH-HSSEEEECHHHHHHC
T ss_pred HHHHHHhhhhhcCCCEEEEeCCCCcchHHHHHHHHHhCCCCCEE---EEecCCCH-HHHHHHHh-CCCEEEEChHHHhCH
Confidence 999999999 8888887 23577889998877335643 33322222 23456666 999999999777654
Q ss_pred HHHH
Q 012478 318 VRAM 321 (462)
Q Consensus 318 ~~Am 321 (462)
-.|+
T Consensus 226 ~~~~ 229 (234)
T 2f6u_A 226 IDAF 229 (234)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 88
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=96.80 E-value=0.011 Score=59.44 Aligned_cols=197 Identities=14% Similarity=0.069 Sum_probs=115.5
Q ss_pred ccCChHHHHHHHHhCC-cEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHh--hcCCcEEEeCCCCCCCHHHHHHHH
Q 012478 95 ACFDALSAKLVEKSGF-SFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQ--AVSIPVIGDGDNGYGNAMNVKRTV 171 (462)
Q Consensus 95 ~ayDalSArl~e~aGf-daI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~r--a~~iPVIaD~DtGyG~~~nv~rtV 171 (462)
|+=|.....++.+.|- ..+++...... .+-+.|. +.+.+ ..+.|+++=+= | .++....+.+
T Consensus 13 g~td~~~r~~~r~~Gg~gli~te~~~~~--~~~~~~~------------~~~~~~~~~~~p~~vQL~-g-~~p~~~~~aA 76 (350)
T 3b0p_A 13 DRTDRHFRFLVRQVSLGVRLYTEMTVDQ--AVLRGNR------------ERLLAFRPEEHPIALQLA-G-SDPKSLAEAA 76 (350)
T ss_dssp TTSSHHHHHHHHHHCSSSBEECCCEEHH--HHHHSCH------------HHHHCCCGGGCSEEEEEE-C-SCHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCCEEEeCCEEec--hhhcCCH------------HHHhccCCCCCeEEEEeC-C-CCHHHHHHHH
Confidence 5667777777777775 55554432221 1111111 12322 23578777663 2 2577888899
Q ss_pred HHHHHhCccEEEeCCCCC-CCCC-CCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHh
Q 012478 172 KGYIKAGFAGIILEDQVS-PKGC-GHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAF 249 (462)
Q Consensus 172 k~l~~AGaaGI~IEDq~~-PKrC-GH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy 249 (462)
+.+.++|+++|.|--... ++.+ +..++--+-..+...+-|++++++. +..+.+.-|.........+++++-++.+
T Consensus 77 ~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v---~~PV~vKiR~g~~~~~~~~~~~~~a~~l 153 (350)
T 3b0p_A 77 RIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV---RVPVTVKMRLGLEGKETYRGLAQSVEAM 153 (350)
T ss_dssp HHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC---SSCEEEEEESCBTTCCCHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh---CCceEEEEecCcCccccHHHHHHHHHHH
Confidence 999999999999976521 1111 1112222234444555555555443 3344444464332223456788889999
Q ss_pred HhcCCcEEEecCCC----------------CHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchH
Q 012478 250 ADAGADVLFIDALA----------------SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSL 313 (462)
Q Consensus 250 ~eAGAD~Ifie~~~----------------s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~l 313 (462)
.++|+|.|.+++.. +.+.++++.+.++.+|+.+| ||-.-.-..+++-+ |+..|.++..+
T Consensus 154 ~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVian----GgI~s~eda~~~l~-GaD~V~iGRa~ 228 (350)
T 3b0p_A 154 AEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTN----GGIRSLEEALFHLK-RVDGVMLGRAV 228 (350)
T ss_dssp HHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEE----SSCCSHHHHHHHHT-TSSEEEECHHH
T ss_pred HHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEE----CCcCCHHHHHHHHh-CCCEEEECHHH
Confidence 99999999998632 45678888888855787765 34211112344445 99999998876
Q ss_pred HH
Q 012478 314 IG 315 (462)
Q Consensus 314 l~ 315 (462)
+.
T Consensus 229 l~ 230 (350)
T 3b0p_A 229 YE 230 (350)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 89
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=96.78 E-value=0.01 Score=59.98 Aligned_cols=119 Identities=15% Similarity=0.190 Sum_probs=82.1
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++.|++||.+ ||+++.-..++.+|..+-+++ .+. ...-|++=+-+ ...+|+
T Consensus 45 D~~~l~~lv~~li~~Gv~Gl~v--------~GtTGE~~~Ls~eEr~~vi~~--~~~----grvpViaGvg~---~st~ea 107 (344)
T 2hmc_A 45 DFDALVRKGKELIADGMSAVVY--------CGSMGDWPLLTDEQRMEGVER--LVK----AGIPVIVGTGA---VNTASA 107 (344)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEE--------SSGGGTGGGSCHHHHHHHHHH--HHH----TTCCEEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEe--------CccCcChhhCCHHHHHHHHHH--HhC----CCCcEEEecCC---CCHHHH
Confidence 5677889999999999999988 666676677888888777776 221 24555555533 357899
Q ss_pred HHHHHHhHhcCCcEEEecCC-----CCHHHHH----HHHH-hCCCCcee-eeeeecCCCCCCCCHHHHHhc
Q 012478 243 LRRSRAFADAGADVLFIDAL-----ASKEEMK----AFCE-ISPLVPKM-ANMLEGGGKTPILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~-----~s~eei~----~i~~-~v~~vP~~-~N~l~~~g~tP~ls~~eL~~l 302 (462)
|+.++.++++|||++++-.+ ++.+++. ++++ ..+ +|++ .|+- ..| -.++++.+.+|
T Consensus 108 i~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~~-lPiilYn~P-~tg--~~l~~e~~~~L 174 (344)
T 2hmc_A 108 VAHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAPE-IPAVIYNSP-YYG--FATRADLFFAL 174 (344)
T ss_dssp HHHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHSTT-SCEEEEEBG-GGT--BCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCCC-CcEEEEecC-ccC--CCcCHHHHHHH
Confidence 99999999999999987432 3555555 4455 443 5754 3542 111 24777777776
No 90
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=96.76 E-value=0.0062 Score=59.88 Aligned_cols=140 Identities=14% Similarity=0.156 Sum_probs=88.6
Q ss_pred chHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHH-------hhhccCCC---CCC-CCHHHHHHHHHH
Q 012478 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSIS-------AARLALPD---TGF-ISYGEMVDQGQL 144 (462)
Q Consensus 76 ~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avS-------as~lG~PD---~g~-vsl~Eml~~~~~ 144 (462)
..-+.|+++.++-+..++-.+||..++..+++ ..|.+.+++..+- .+.+|.|= +|. .+++||...+..
T Consensus 62 ~GL~~l~~~~~e~Glp~~te~~d~~~~~~l~~-~vd~~~IgA~~~rn~~ll~~~a~~~~PV~lK~G~~~t~~e~~~Av~~ 140 (267)
T 2nwr_A 62 YGVKALRKVKEEFGLKITTDIHESWQAEPVAE-VADIIQIPAFLCRQTDLLLAAAKTGRAVNVKKGQFLAPWDTKNVVEK 140 (267)
T ss_dssp HHHHHHHHHHHHHCCEEEEECSSGGGHHHHHT-TCSEEEECGGGTTCHHHHHHHHTTTSEEEEECCTTCCGGGGHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEecCCHHhHHHHHh-cCCEEEECcccccCHHHHHHHHcCCCcEEEeCCCCCCHHHHHHHHHH
Confidence 33456777766667888889999999999988 6999999983322 12345553 244 688888887776
Q ss_pred HHhh-------------------------------cCCcEEEeCCCC------CCC-----HHHHHHHHHHHHHhCccEE
Q 012478 145 ITQA-------------------------------VSIPVIGDGDNG------YGN-----AMNVKRTVKGYIKAGFAGI 182 (462)
Q Consensus 145 I~ra-------------------------------~~iPVIaD~DtG------yG~-----~~nv~rtVk~l~~AGaaGI 182 (462)
|... .+ |||+|.-++ |++ ..-+....+..+.+||+|+
T Consensus 141 i~~~GN~~i~L~~rG~~~~y~~~~~dl~~i~~lk~~~-pVivD~sH~~q~p~G~s~hs~g~~~~~~~ia~aava~Ga~G~ 219 (267)
T 2nwr_A 141 LKFGGAKEIYLTERGTTFGYNNLVVDFRSLPIMKQWA-KVIYDATHSVQLPGGLGDKSGGMREFIFPLIRAAVAVGCDGV 219 (267)
T ss_dssp HHHTTCSSEEEEECCEECSSSCEECCTTHHHHHTTTS-EEEEETTGGGCCTTC------CCGGGHHHHHHHHHHHCCSEE
T ss_pred HHHcCCCeEEEEECCCCCCCCccccCHHHHHHHHHcC-CEEEcCCcccccCCCcCcCCCCchhHHHHHHHHHHHcCCCEE
Confidence 6421 13 999997665 432 2224455566678999999
Q ss_pred EeCCCCCCCCCCCCCCCcccCHHH---HHHHHHHHHHHH
Q 012478 183 ILEDQVSPKGCGHTRGRKVVSREE---AVMRIKAAVDAR 218 (462)
Q Consensus 183 ~IEDq~~PKrCGH~~gk~Lvp~ee---~~~kI~AA~~Ar 218 (462)
.||--..|.+-- .+|+.-+++++ +++.|+++..+.
T Consensus 220 mIE~H~~pd~al-~Dg~qsl~p~~l~~l~~~i~~~~~~~ 257 (267)
T 2nwr_A 220 FMETHPEPEKAL-SDASTQLPLSQLEGIIEAILEIREVA 257 (267)
T ss_dssp EEEEESCGGGCS-SCTTTCEEGGGHHHHHHHHHHHHHHH
T ss_pred EEEecCCcccCC-CccccCCCHHHHHHHHHHHHHHHHHh
Confidence 999765442211 14444445444 455555444443
No 91
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=96.72 E-value=0.05 Score=49.97 Aligned_cols=155 Identities=16% Similarity=0.101 Sum_probs=91.3
Q ss_pred HHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccE
Q 012478 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAG 181 (462)
Q Consensus 102 Arl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaG 181 (462)
++.+++.|++.|-+.-. |. +.+..++.+++..++|+++-..+-+ +. ..++.+.++||++
T Consensus 25 ~~~~~~~G~~~i~l~~~----------~~------~~~~~i~~i~~~~~~~l~vg~g~~~-~~----~~i~~a~~~Gad~ 83 (212)
T 2v82_A 25 VGAVIDAGFDAVEIPLN----------SP------QWEQSIPAIVDAYGDKALIGAGTVL-KP----EQVDALARMGCQL 83 (212)
T ss_dssp HHHHHHHTCCEEEEETT----------ST------THHHHHHHHHHHHTTTSEEEEECCC-SH----HHHHHHHHTTCCE
T ss_pred HHHHHHCCCCEEEEeCC----------Ch------hHHHHHHHHHHhCCCCeEEEecccc-CH----HHHHHHHHcCCCE
Confidence 45566789998876421 11 1134566677767788777322111 22 2467888999999
Q ss_pred EEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecC
Q 012478 182 IILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDA 261 (462)
Q Consensus 182 I~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~ 261 (462)
|++... . .+.+ ++++..|.++ +++ ....+|+ ....++|+|.|.+..
T Consensus 84 V~~~~~---------~-------~~~~-------~~~~~~g~~~-~~g------~~t~~e~----~~a~~~G~d~v~v~~ 129 (212)
T 2v82_A 84 IVTPNI---------H-------SEVI-------RRAVGYGMTV-CPG------CATATEA----FTALEAGAQALKIFP 129 (212)
T ss_dssp EECSSC---------C-------HHHH-------HHHHHTTCEE-ECE------ECSHHHH----HHHHHTTCSEEEETT
T ss_pred EEeCCC---------C-------HHHH-------HHHHHcCCCE-Eee------cCCHHHH----HHHHHCCCCEEEEec
Confidence 985331 1 1222 1223334333 333 2234443 445679999998631
Q ss_pred --CCCHHHHHHHHHhCC-CCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012478 262 --LASKEEMKAFCEISP-LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316 (462)
Q Consensus 262 --~~s~eei~~i~~~v~-~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~a 316 (462)
....+.++++.+.++ .+|+ +..||-+ .-+..++.+.|+..|..+..++..
T Consensus 130 t~~~g~~~~~~l~~~~~~~ipv----ia~GGI~-~~~i~~~~~~Ga~gv~vGsai~~~ 182 (212)
T 2v82_A 130 SSAFGPQYIKALKAVLPSDIAV----FAVGGVT-PENLAQWIDAGCAGAGLGSDLYRA 182 (212)
T ss_dssp HHHHCHHHHHHHHTTSCTTCEE----EEESSCC-TTTHHHHHHHTCSEEEECTTTCCT
T ss_pred CCCCCHHHHHHHHHhccCCCeE----EEeCCCC-HHHHHHHHHcCCCEEEEChHHhCC
Confidence 124577788877654 2343 2334555 357899999999999999877653
No 92
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=96.69 E-value=0.27 Score=51.21 Aligned_cols=228 Identities=16% Similarity=0.125 Sum_probs=132.0
Q ss_pred HhCCC--ceEecccCChHHHHHHH----HhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCc---EEE
Q 012478 85 LELPG--VHQGPACFDALSAKLVE----KSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIP---VIG 155 (462)
Q Consensus 85 l~~~~--~iv~p~ayDalSArl~e----~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iP---VIa 155 (462)
.+++. .+...|+++...++.+- +.+.+.|+-.+-....-.-|| ...++.++...++.+++..++| |+.
T Consensus 8 ~~~~~a~av~afn~~n~e~i~Ail~aAee~~sPVIi~~s~~~v~~~gGY---~g~~~~~~~~~v~~~A~~~~vP~~~VaL 84 (420)
T 2fiq_A 8 HKAGEHIGICSVCSAHPLVIEAALAFDRNSTRKVLIEATSNQVNQFGGY---TGMTPADFREFVFAIADKVGFARERIIL 84 (420)
T ss_dssp HHTTCCBCEEEECCCCHHHHHHHHHHTTTSCCCEEEEEETTTBSTTCTT---TTBCHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred HHcCCceEEEEeccCCHHHHHHHHHHHHHcCCCEEEEcChhhhhhccCC---CCCCHHHHHHHHHHHHHHcCcCcceEEE
Confidence 44555 35577888988876653 457888876543211001123 1234799999999999988999 999
Q ss_pred eCCCCCCC------H----HHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcc-cCHHHHHHHHHHHHHHHHhh---
Q 012478 156 DGDNGYGN------A----MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKV-VSREEAVMRIKAAVDARKES--- 221 (462)
Q Consensus 156 D~DtGyG~------~----~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~L-vp~ee~~~kI~AA~~Ar~~~--- 221 (462)
=.|+|.-. + ..+.+.++.++++|...|+|.... -|- +.++ .+.+..+.|-+.+++.+...
T Consensus 85 HlDHg~~~~w~~~~~~~am~~a~e~i~~aI~aGFtSVMiD~S~---~~~---~~~~pl~eNi~~~rt~elv~~Ah~~~~~ 158 (420)
T 2fiq_A 85 GGDHLGPNCWQQENVDAAMEKSVELVKAYVRAGFSKIHLDASM---SCA---GDPIPLAPETVAERAAVLCFAAESVATD 158 (420)
T ss_dssp EEEEESSGGGTTSBHHHHHHHHHHHHHHHHHTTCCEEEECCCS---CCB---TCCSSCCHHHHHHHHHHHHHHHHHHCCH
T ss_pred ECCCCCCccccccchhhhhhhHHHHHHHHHHhCCCEEEECCCC---CCC---CCCCCccHHHHHHHHHHHHHHHHHHccc
Confidence 99998332 2 245577899999999999994332 121 1121 22222222122222222211
Q ss_pred -C-CCeEEEEecc---------hh---hcccHHHHHHHHH----HhHhcCCcE-------EEe-----------cCCCCH
Q 012478 222 -G-SDIVIVARTD---------SR---QALSLEESLRRSR----AFADAGADV-------LFI-----------DALASK 265 (462)
Q Consensus 222 -g-~d~vIiARTD---------A~---~~~gldeAI~Rak----Ay~eAGAD~-------Ifi-----------e~~~s~ 265 (462)
+ .++-.++-|+ .. .-.+.+||.+=.+ +|.+.|.|+ +.+ +.+ +.
T Consensus 159 ~~eaElG~vgG~Ev~v~~~~~~~~~~~~~T~PeeA~~Fve~~~~~~~~tGvd~~~~~vi~LAV~iGt~HG~y~~~~l-d~ 237 (420)
T 2fiq_A 159 CQREQLSYVIGTEVPVPGGEASAIQSVHITHVEDAANTLRTHQKAFIARGLTEALTRVIAIVVQPGVEFDHSNIIHY-QP 237 (420)
T ss_dssp HHHHHCEEEEECSSCC----------CCCCCHHHHHHHHHHHHHHHHTTTCHHHHHTEEEEECCCSCEECSSCEECC-CG
T ss_pred CCcccceEEeeeecCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHhhCCCcccccceEEEEeCCccCCCCCCCCc-CH
Confidence 0 1222223333 01 1234566666555 666899999 442 222 44
Q ss_pred HHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHH---hcCCCEEeccchHHHHHHHHHHHHHH
Q 012478 266 EEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE---ELGFKLVAYPLSLIGVSVRAMQDALT 326 (462)
Q Consensus 266 eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~---~lGv~~V~yp~~ll~aa~~Am~~~l~ 326 (462)
+.+++|.+.++ +|.+ +++..| +..++.++|+ ++|+..+-+++.+..+...|+.....
T Consensus 238 e~l~~I~~~v~-~P~L--Vle~HG-gSg~~~e~l~~~v~~Gi~kiNV~t~l~~a~~~al~~l~~ 297 (420)
T 2fiq_A 238 QEAQALAQWIE-NTRM--VYEAHS-TDYQTRTAYWELVRDHFAILKVGPALTFALREAIFALAQ 297 (420)
T ss_dssp GGGHHHHHHHT-TSSC--EEEESC-CTTCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcC-CCCE--EEecCC-CCCCCHHHHHHHHHcCCCEEEECHHHHHHHHHHHHHHHH
Confidence 67777777765 4623 242223 2345665555 46999999999988887777766653
No 93
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=96.67 E-value=0.0095 Score=57.65 Aligned_cols=187 Identities=14% Similarity=0.160 Sum_probs=106.7
Q ss_pred HHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCC-CHHHHHHHHHHHHHhCcc
Q 012478 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYG-NAMNVKRTVKGYIKAGFA 180 (462)
Q Consensus 102 Arl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG-~~~nv~rtVk~l~~AGaa 180 (462)
.+.+.++|.|+|-+++. .-++++.+++.+++|.+ .++|||. .+|. |+. .+|++
T Consensus 26 ~~~l~~~GaD~ielG~S------------~Gvt~~~~~~~v~~ir~-~~~Pivl---m~y~~n~i----------~~G~d 79 (240)
T 1viz_A 26 LEILCESGTDAVIIGGS------------DGVTEDNVLRMMSKVRR-FLVPCVL---EVSAIEAI----------VPGFD 79 (240)
T ss_dssp HHHHHTSCCSEEEECC----------------CHHHHHHHHHHHTT-SSSCEEE---ECSCGGGC----------CSCCS
T ss_pred HHHHHHcCCCEEEECCC------------CCCCHHHHHHHHHHhhC-cCCCEEE---ecCccccc----------cCCCC
Confidence 35677889999999981 44788999999999988 8999998 5555 322 78999
Q ss_pred EEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhC-CCeE-----EEEecch--hh-cccHHHHHHHHHHhHh
Q 012478 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESG-SDIV-----IVARTDS--RQ-ALSLEESLRRSRAFAD 251 (462)
Q Consensus 181 GI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g-~d~v-----IiARTDA--~~-~~gldeAI~RakAy~e 251 (462)
|+.+=|=.. -. ...++ ... -+.++.+....+. .+.+ +++=+.. +. ....+.--+|+++|.+
T Consensus 80 g~iiPdLp~-ee-----~~~~~-~g~---~~~a~~~~g~~~~~l~~i~~gy~l~~P~~~~~rl~~~d~~~~~~~~~~~a~ 149 (240)
T 1viz_A 80 LYFIPSVLN-SK-----NADWI-VGM---HQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYAR 149 (240)
T ss_dssp EEEEEEETT-BS-----SGGGT-THH---HHHHHHHCHHHHHHSCEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHH
T ss_pred EEEEcccCc-cc-----Chhhh-cch---hHHHHHHcCCCCcceeeeecccEEECCCCceEEeeccCCCCCHHHHHHHHH
Confidence 999977421 00 00110 000 0122222110000 1222 3332211 10 0000011348999999
Q ss_pred cCC----cEEEecC---CCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHHHHHHHHHHH
Q 012478 252 AGA----DVLFIDA---LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVSVRAMQDA 324 (462)
Q Consensus 252 AGA----D~Ifie~---~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~aa~~Am~~~ 324 (462)
+|. -.|++++ ....+.++++.+....+|+. +.+|=++| =..+++.+ |+..|+.++.+...--..+++
T Consensus 150 ~g~~~~~~~VYl~s~G~~~~~~~i~~i~~~~~~~Pv~---vGgGI~t~-e~a~~~~~-gAd~VIVGSa~v~~~~~~~~~- 223 (240)
T 1viz_A 150 VSELLQLPIFYLEYSGVLGDIEAVKKTKAVLETSTLF---YGGGIKDA-ETAKQYAE-HADVIVVGNAVYEDFDRALKT- 223 (240)
T ss_dssp HHHHTTCSEEEEECTTSCCCHHHHHHHHHTCSSSEEE---EESSCCSH-HHHHHHHT-TCSEEEECTHHHHCHHHHHTH-
T ss_pred hCcccCCCEEEEeCCCccChHHHHHHHHHhcCCCCEE---EEeccCCH-HHHHHHHh-CCCEEEEChHHHhCHHHHHHH-
Confidence 986 6788887 23577888888876235643 33322222 13455666 999999999887654334545
Q ss_pred HHHHHc
Q 012478 325 LTAIKG 330 (462)
Q Consensus 325 l~~l~~ 330 (462)
.+++++
T Consensus 224 v~~~~~ 229 (240)
T 1viz_A 224 VAAVKG 229 (240)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 556664
No 94
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=96.67 E-value=0.051 Score=54.21 Aligned_cols=136 Identities=18% Similarity=0.236 Sum_probs=94.8
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEE
Q 012478 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA 229 (462)
Q Consensus 150 ~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiA 229 (462)
.+|+.+= .|++++....+.++++.++|..+|+| ++||. +.+..+++|++++++. |+++.|
T Consensus 133 ~vp~~~~--~g~~~~~~~~~~a~~~~~~Gf~~iKi-------k~g~~------~~~~~~e~v~avr~a~---g~~~~l-- 192 (359)
T 1mdl_A 133 PVQAYDS--HSLDGVKLATERAVTAAELGFRAVKT-------RIGYP------ALDQDLAVVRSIRQAV---GDDFGI-- 192 (359)
T ss_dssp CEEEEEE--CCSCHHHHHHHHHHHHHHTTCSEEEE-------ECCCS------SHHHHHHHHHHHHHHH---CSSSEE--
T ss_pred Ceeeeee--cCCCCHHHHHHHHHHHHHcCCCEEEE-------ecCCC------CHHHHHHHHHHHHHHh---CCCCEE--
Confidence 4676553 45666777888888999999999999 24551 3466788888887774 567766
Q ss_pred ecchhhcccHHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHh---c-
Q 012478 230 RTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE---L- 302 (462)
Q Consensus 230 RTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~---l- 302 (462)
+.|+.....++++++-++++.+.|.+. +|-+ .+.+.++++.+.++ +|+..+ +. ..+.+++.+ .
T Consensus 193 ~vDan~~~~~~~a~~~~~~l~~~~i~~--iE~P~~~~~~~~~~~l~~~~~-iPI~~d-----e~--~~~~~~~~~~i~~~ 262 (359)
T 1mdl_A 193 MVDYNQSLDVPAAIKRSQALQQEGVTW--IEEPTLQHDYEGHQRIQSKLN-VPVQMG-----EN--WLGPEEMFKALSIG 262 (359)
T ss_dssp EEECTTCSCHHHHHHHHHHHHHHTCSC--EECCSCTTCHHHHHHHHHTCS-SCEEEC-----TT--CCSHHHHHHHHHTT
T ss_pred EEECCCCCCHHHHHHHHHHHHHhCCCe--EECCCChhhHHHHHHHHHhCC-CCEEeC-----CC--CCCHHHHHHHHHcC
Confidence 457777778999999999999999885 4543 36778888888775 676533 22 235555544 3
Q ss_pred CCCEEeccchHHH
Q 012478 303 GFKLVAYPLSLIG 315 (462)
Q Consensus 303 Gv~~V~yp~~ll~ 315 (462)
+++.|..-..-..
T Consensus 263 ~~d~v~ik~~~~G 275 (359)
T 1mdl_A 263 ACRLAMPDAMKIG 275 (359)
T ss_dssp CCSEECCBTTTTT
T ss_pred CCCEEeecchhhC
Confidence 4787777555433
No 95
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=96.65 E-value=0.096 Score=51.99 Aligned_cols=182 Identities=15% Similarity=0.102 Sum_probs=110.1
Q ss_pred HHHHHHhCCCceE-ec--ccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEe
Q 012478 80 SLRQILELPGVHQ-GP--ACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGD 156 (462)
Q Consensus 80 ~LR~ll~~~~~iv-~p--~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD 156 (462)
+|.+++.-.-+++ .| +.-+.-.+..+.++|.-.+..++ .++.+++.+.++.+.+.++.|+.+.
T Consensus 4 ~~~~~l~~~~Pii~apM~g~s~~~la~av~~aG~lG~i~~~--------------~~~~~~~~~~i~~i~~~~~~p~gvn 69 (332)
T 2z6i_A 4 RITELLKIDYPIFQGGMAWVADGDLAGAVSKAGGLGIIGGG--------------NAPKEVVKANIDKIKSLTDKPFGVN 69 (332)
T ss_dssp HHHHHHTCSSSEEECCCTTTCCHHHHHHHHHHTSBEEEECT--------------TCCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred hhhHHhCCCCCEEeCCCCCCCcHHHHHHHHhCCCcEEeCCC--------------CCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 4666664333443 33 55666667777788752222211 2467777777777776666777655
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhc
Q 012478 157 GDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA 236 (462)
Q Consensus 157 ~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~ 236 (462)
.=. .++ ...+.++.+.++|+++|.+-.. + | .+++++++. .++.|+.+.+.
T Consensus 70 l~~--~~~-~~~~~~~~a~~~g~d~V~~~~g-------~-------p-~~~i~~l~~---------~g~~v~~~v~~--- 119 (332)
T 2z6i_A 70 IML--LSP-FVEDIVDLVIEEGVKVVTTGAG-------N-------P-SKYMERFHE---------AGIIVIPVVPS--- 119 (332)
T ss_dssp ECT--TST-THHHHHHHHHHTTCSEEEECSS-------C-------G-GGTHHHHHH---------TTCEEEEEESS---
T ss_pred ecC--CCC-CHHHHHHHHHHCCCCEEEECCC-------C-------h-HHHHHHHHH---------cCCeEEEEeCC---
Confidence 311 122 2445677888899999998442 2 1 234444432 14666666533
Q ss_pred ccHHHHHHHHHHhHhcCCcEEEecCC---------CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEE
Q 012478 237 LSLEESLRRSRAFADAGADVLFIDAL---------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLV 307 (462)
Q Consensus 237 ~gldeAI~RakAy~eAGAD~Ifie~~---------~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V 307 (462)
++.++.+.++|||.|.+.+. .+.+.++++.+.+. +|++++ ||-...-...++-++|...|
T Consensus 120 ------~~~a~~~~~~GaD~i~v~g~~~GG~~g~~~~~~ll~~i~~~~~-iPViaa----GGI~~~~~~~~al~~GAdgV 188 (332)
T 2z6i_A 120 ------VALAKRMEKIGADAVIAEGMEAGGHIGKLTTMTLVRQVATAIS-IPVIAA----GGIADGEGAAAGFMLGAEAV 188 (332)
T ss_dssp ------HHHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCS-SCEEEE----SSCCSHHHHHHHHHTTCSEE
T ss_pred ------HHHHHHHHHcCCCEEEEECCCCCCCCCCccHHHHHHHHHHhcC-CCEEEE----CCCCCHHHHHHHHHcCCCEE
Confidence 33567788999999999653 23466777777764 675432 34321123456667899999
Q ss_pred eccchHHHH
Q 012478 308 AYPLSLIGV 316 (462)
Q Consensus 308 ~yp~~ll~a 316 (462)
..+..++..
T Consensus 189 ~vGs~~l~~ 197 (332)
T 2z6i_A 189 QVGTRFVVA 197 (332)
T ss_dssp EECHHHHTB
T ss_pred EecHHHhcC
Confidence 999887764
No 96
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=96.63 E-value=0.067 Score=54.18 Aligned_cols=89 Identities=19% Similarity=0.118 Sum_probs=54.8
Q ss_pred HHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEec-cH-HHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeC
Q 012478 80 SLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTS-GF-SISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDG 157 (462)
Q Consensus 80 ~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vS-G~-avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~ 157 (462)
.|-++++ ++.+ + .|-.+-.|+++|++|+.+|..= -. ...-...|. ..+.-. +.++.|.+++++||++=.
T Consensus 11 ~~~~~~k-gGvI-~-d~~~~e~A~~ae~aGA~aI~~l~~v~~d~~~~~G~---arm~~p---~~i~~I~~av~iPV~~K~ 81 (330)
T 2yzr_A 11 GFAKMVK-HGVV-M-DVTNVEQAQIAEEAGAVAVMALERVPADIRAAGGV---ARMSDP---ALIEEIMDAVSIPVMAKC 81 (330)
T ss_dssp HHHHTTT-TSEE-E-EESSHHHHHHHHHHTCSEEEECSSCHHHHC--CCC---CCCCCH---HHHHHHHHHCSSCEEEEE
T ss_pred HHHHHcc-CCce-e-eCCHHHHHHHHHHcCCCEEEecCCccccccCCcch---hhcCCH---HHHHHHHHhcCCCeEEEE
Confidence 4555543 4444 4 6777889999999999998321 00 110000111 122222 345566678999999998
Q ss_pred CCCCCCHHHHHHHHHHHHHhCccEEE
Q 012478 158 DNGYGNAMNVKRTVKGYIKAGFAGII 183 (462)
Q Consensus 158 DtGyG~~~nv~rtVk~l~~AGaaGI~ 183 (462)
=-|| ..-++.++.+||+.|-
T Consensus 82 rig~------~~e~qilea~GaD~Id 101 (330)
T 2yzr_A 82 RIGH------TTEALVLEAIGVDMID 101 (330)
T ss_dssp ETTC------HHHHHHHHHTTCSEEE
T ss_pred eecc------hHHHHHHHHcCCCEEe
Confidence 8898 3345667779999995
No 97
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=96.59 E-value=0.17 Score=49.93 Aligned_cols=200 Identities=13% Similarity=0.058 Sum_probs=110.9
Q ss_pred HHHHHHHhCCcEEEeccHHHHhhhccCCC---------CCC--------CCHHHHHHHHHHHHhhcCCcEEEeCCCCC--
Q 012478 101 SAKLVEKSGFSFCFTSGFSISAARLALPD---------TGF--------ISYGEMVDQGQLITQAVSIPVIGDGDNGY-- 161 (462)
Q Consensus 101 SArl~e~aGfdaI~vSG~avSas~lG~PD---------~g~--------vsl~Eml~~~~~I~ra~~iPVIaD~DtGy-- 161 (462)
.++.+.+.|+-.+.+++..+. ...|.|. .+. -.++++++.++.. ..+.|+++-.-...
T Consensus 70 ~~~~~a~~G~g~i~~~~~~~~-~~~g~~~pr~~~~~~d~~~in~~g~~~~g~~~~~~~~~~~--~~~~~~~v~i~~~~~~ 146 (336)
T 1f76_A 70 CIDALGAMGFGSIEIGTVTPR-PQPGNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVKKA--HYDGVLGINIGKNKDT 146 (336)
T ss_dssp CHHHHHHTTCSEEEEEEECSS-CBCCSCSCCEEEETTTTEEEECCCCCBCCHHHHHHHHHHC--CCCSEEEEEECCCTTS
T ss_pred HHHHHHHcCccEEEeCCCCCC-CCCCCCCcceeeccccceeeecCCCCCcCHHHHHHHHHhc--ccCCcEEEEecCCCCC
Confidence 567788999998877654321 1112211 111 1245555544432 12467877651110
Q ss_pred ---CCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCC-cccCHHHHHHHHHHHHHHHHhh----CCCeEEEEecch
Q 012478 162 ---GNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGR-KVVSREEAVMRIKAAVDARKES----GSDIVIVARTDS 233 (462)
Q Consensus 162 ---G~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk-~Lvp~ee~~~kI~AA~~Ar~~~----g~d~vIiARTDA 233 (462)
.......+.++++.+ |+++|-|-=. |.++.|. .+-..+...+-|++++++..++ |.++-|+.|.-.
T Consensus 147 ~i~~~~~~~~~aa~~~~~-g~d~iein~~-----sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~ 220 (336)
T 1f76_A 147 PVEQGKDDYLICMEKIYA-YAGYIAINIS-----SPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAP 220 (336)
T ss_dssp CGGGTHHHHHHHHHHHGG-GCSEEEEECC-----CSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCS
T ss_pred cccccHHHHHHHHHHHhc-cCCEEEEEcc-----CCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecC
Confidence 014566666776655 9999866432 3333322 2334444455555555554221 335555556422
Q ss_pred hhcccHHHHHHHHHHhHhcCCcEEEecCCC--------------------------CHHHHHHHHHhCC-CCceeeeeee
Q 012478 234 RQALSLEESLRRSRAFADAGADVLFIDALA--------------------------SKEEMKAFCEISP-LVPKMANMLE 286 (462)
Q Consensus 234 ~~~~gldeAI~RakAy~eAGAD~Ifie~~~--------------------------s~eei~~i~~~v~-~vP~~~N~l~ 286 (462)
....++..+-|+..+++|+|+|.+.+-. +.+.++++.+.++ .+|+..+
T Consensus 221 --~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~--- 295 (336)
T 1f76_A 221 --DLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGV--- 295 (336)
T ss_dssp --CCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEE---
T ss_pred --CCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEE---
Confidence 1345677888999999999999875320 1256667777664 3676543
Q ss_pred cCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012478 287 GGGKTPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 287 ~~g~tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
||-.-.-+..+.-++|.+.|..+..++.
T Consensus 296 -GGI~~~~da~~~l~~GAd~V~igr~~l~ 323 (336)
T 1f76_A 296 -GGIDSVIAAREKIAAGASLVQIYSGFIF 323 (336)
T ss_dssp -SSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred -CCCCCHHHHHHHHHCCCCEEEeeHHHHh
Confidence 3422222455566689999988877664
No 98
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=96.58 E-value=0.021 Score=56.79 Aligned_cols=141 Identities=19% Similarity=0.169 Sum_probs=94.6
Q ss_pred chHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHh-------hhccCCC---CCC-CCHHHHHHHHHH
Q 012478 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISA-------ARLALPD---TGF-ISYGEMVDQGQL 144 (462)
Q Consensus 76 ~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSa-------s~lG~PD---~g~-vsl~Eml~~~~~ 144 (462)
..-+.|++..++-+..++-.+||..+...+++. .|.+.+++..+-. +.+|.|= ++. .+++||...++.
T Consensus 78 ~GL~~L~~~~~e~Glp~~Tev~d~~~v~~l~~~-vd~lqIgA~~~~n~~LLr~va~~gkPVilK~G~~~t~~ei~~ave~ 156 (285)
T 3sz8_A 78 EGLKIFAEVKARFGVPVITDVHEAEQAAPVAEI-ADVLQVPAFLARQTDLVVAIAKAGKPVNVKKPQFMSPTQLKHVVSK 156 (285)
T ss_dssp HHHHHHHHHHHHHCCCEEEECCSGGGHHHHHTT-CSEEEECGGGTTCHHHHHHHHHTSSCEEEECCTTSCGGGTHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHh-CCEEEECccccCCHHHHHHHHccCCcEEEeCCCCCCHHHHHHHHHH
Confidence 345567777777778888999999999999998 9999999843211 2457763 355 688999887776
Q ss_pred HHh--------------------------------hc-CCcEEEeCCCCC-----------CCHHHHHHHHHHHHHhCcc
Q 012478 145 ITQ--------------------------------AV-SIPVIGDGDNGY-----------GNAMNVKRTVKGYIKAGFA 180 (462)
Q Consensus 145 I~r--------------------------------a~-~iPVIaD~DtGy-----------G~~~nv~rtVk~l~~AGaa 180 (462)
|.. .+ ++||++|.++.- |...-+....+..+.+||+
T Consensus 157 i~~~Gn~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~ 236 (285)
T 3sz8_A 157 CGEVGNDRVMLCERGSSFGYDNLVVDMLGFRQMAETTGGCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIA 236 (285)
T ss_dssp HHHTTCCCEEEEECCEECSSSCEECCTTHHHHHHHHTTSCCEEEETTTTCC---------------HHHHHHHHHHHCCS
T ss_pred HHHcCCCcEEEEeCCCCCCCCcCccCHHHHHHHHHhCCCCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCC
Confidence 643 24 599999999872 4444556666777889999
Q ss_pred EEEeCCCCCCCCCCCCCCCcccCHH---HHHHHHHHHHHHH
Q 012478 181 GIILEDQVSPKGCGHTRGRKVVSRE---EAVMRIKAAVDAR 218 (462)
Q Consensus 181 GI~IEDq~~PKrCGH~~gk~Lvp~e---e~~~kI~AA~~Ar 218 (462)
|+.||=-..|.+- -.+++.-++++ ++++.|+++.++.
T Consensus 237 gl~IE~H~~pd~a-l~D~~~sl~p~el~~lv~~i~~i~~~l 276 (285)
T 3sz8_A 237 GLFLEAHPDPDRA-RCDGPSALPLHQLEGLLSQMKAIDDLV 276 (285)
T ss_dssp EEEEEEESCGGGC-SCSSCCCEEGGGHHHHHHHHHHHHHHH
T ss_pred EEEEEeccChhcc-CCchhhccCHHHHHHHHHHHHHHHHHh
Confidence 9999987655321 11444444444 4555555554443
No 99
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=96.56 E-value=0.049 Score=55.28 Aligned_cols=140 Identities=15% Similarity=0.117 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHhCccEEEeCCCC--------C---CCCCCCCCCCcccC-HHHHHHHHHHHHHHHHhhCCCeEEEEecc
Q 012478 165 MNVKRTVKGYIKAGFAGIILEDQV--------S---PKGCGHTRGRKVVS-REEAVMRIKAAVDARKESGSDIVIVARTD 232 (462)
Q Consensus 165 ~nv~rtVk~l~~AGaaGI~IEDq~--------~---PKrCGH~~gk~Lvp-~ee~~~kI~AA~~Ar~~~g~d~vIiARTD 232 (462)
....+.++..+++|++||.|--.. . .||...-+|. +.. .+-..+-|++++++. |.+ .|..|.-
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGs-lenr~r~~~eiv~avr~~v---g~~-pv~vris 235 (365)
T 2gou_A 161 ADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGS-LENRLRFLDEVVAALVDAI---GAE-RVGVRLA 235 (365)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSS-HHHHTHHHHHHHHHHHHHH---CGG-GEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcc-hhhhHHHHHHHHHHHHHHc---CCC-cEEEEEc
Confidence 345566777789999999995431 0 2333222332 211 112334455554443 444 3444432
Q ss_pred hh-------hcccHHHHHHHHHHhHhcCCcEEEecCC-----C--CHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHH
Q 012478 233 SR-------QALSLEESLRRSRAFADAGADVLFIDAL-----A--SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE 298 (462)
Q Consensus 233 A~-------~~~gldeAI~RakAy~eAGAD~Ifie~~-----~--s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~e 298 (462)
.. ....++++++-+++++++|+|.|-+... + ..+.++++.+.++ +|++.| ++-+| -..++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~~-iPvi~~----Ggi~~-~~a~~ 309 (365)
T 2gou_A 236 PLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAYQ-GVLIYA----GRYNA-EKAEQ 309 (365)
T ss_dssp SSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCC-SEEEEE----SSCCH-HHHHH
T ss_pred cccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHCC-CcEEEe----CCCCH-HHHHH
Confidence 21 1235788999999999999999987653 1 2456777878776 576644 23222 12345
Q ss_pred HHhcC-CCEEeccchHHH
Q 012478 299 LEELG-FKLVAYPLSLIG 315 (462)
Q Consensus 299 L~~lG-v~~V~yp~~ll~ 315 (462)
+-+.| +..|.++-.++.
T Consensus 310 ~l~~g~aD~V~igR~~i~ 327 (365)
T 2gou_A 310 AINDGLADMIGFGRPFIA 327 (365)
T ss_dssp HHHTTSCSEEECCHHHHH
T ss_pred HHHCCCcceehhcHHHHh
Confidence 55556 899988776554
No 100
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=96.54 E-value=0.12 Score=50.66 Aligned_cols=178 Identities=20% Similarity=0.157 Sum_probs=96.3
Q ss_pred eEecccCChHHHHHHHHhCCcEE-EeccHHH-HhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHH
Q 012478 91 HQGPACFDALSAKLVEKSGFSFC-FTSGFSI-SAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVK 168 (462)
Q Consensus 91 iv~p~ayDalSArl~e~aGfdaI-~vSG~av-Sas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~ 168 (462)
+++ ++--.-.|+.++++|+++| .+.-... .....|. ..+.. .+.++.|++.+++||++..-.|| .
T Consensus 24 ~i~-~~~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~---~~~~~---~~~i~~I~~~~~iPv~~k~r~g~------~ 90 (305)
T 2nv1_A 24 VIM-DVINAEQAKIAEEAGAVAVMALERVPADIRAAGGV---ARMAD---PTIVEEVMNAVSIPVMAKARIGH------I 90 (305)
T ss_dssp EEE-EESSHHHHHHHHHTTCSEEEECCC-------CCCC---CCCCC---HHHHHHHHHHCSSCEEEEECTTC------H
T ss_pred eee-cCCHHHHHHHHHHcCCCEEEEcCCCcchhhhccCc---ccCCC---HHHHHHHHHhCCCCEEecccccc------h
Confidence 444 5444566888999999999 5531000 0000110 11222 33455667778999998777776 3
Q ss_pred HHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHH
Q 012478 169 RTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRA 248 (462)
Q Consensus 169 rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakA 248 (462)
..++.+.++||++|..-+...|.... .++. ....|..+++-.++ ++|+.+ +
T Consensus 91 ~~~~~~~a~GAd~V~~~~~l~~~~~~-----~~i~--------------~~~~g~~v~~~~~~-------~~e~~~---a 141 (305)
T 2nv1_A 91 VEARVLEAMGVDYIDESEVLTPADEE-----FHLN--------------KNEYTVPFVCGCRD-------LGEATR---R 141 (305)
T ss_dssp HHHHHHHHHTCSEEEECTTSCCSCSS-----CCCC--------------GGGCSSCEEEEESS-------HHHHHH---H
T ss_pred HHHHHHHHCCCCEEEEeccCCHHHHH-----HHHH--------------HhccCCcEEEEeCC-------HHHHHH---H
Confidence 44566777999999732221121110 0111 01123344443332 344332 2
Q ss_pred hHhcCCcEEEecC---------------------------------------CCCHHHHHHHHHhCCCCceeeeeeecCC
Q 012478 249 FADAGADVLFIDA---------------------------------------LASKEEMKAFCEISPLVPKMANMLEGGG 289 (462)
Q Consensus 249 y~eAGAD~Ifie~---------------------------------------~~s~eei~~i~~~v~~vP~~~N~l~~~g 289 (462)
.++|||+|.+.+ ..+.+.++++.+... +|+. ++..+ |
T Consensus 142 -~~~Gad~V~~~G~~g~g~~~~~~~h~rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~~~-iPvi-~~a~G-G 217 (305)
T 2nv1_A 142 -IAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDGK-LPVV-NFAAG-G 217 (305)
T ss_dssp -HHTTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHTS-CSSC-EEBCS-C
T ss_pred -HHCCCCEEEeccccCccchHHHHhhhhhhhccchhhccccchhhhcccccccccHHHHHHHHHhcC-CCEE-EEecc-C
Confidence 378888887731 234566777776553 5643 22333 4
Q ss_pred C-CCCCCHHHHHhcCCCEEeccchHHH
Q 012478 290 K-TPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 290 ~-tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
- ++ -+..++.++|+.-|..+..++.
T Consensus 218 I~~~-~d~~~~~~~GadgV~vGsai~~ 243 (305)
T 2nv1_A 218 VATP-ADAALMMQLGADGVFVGSGIFK 243 (305)
T ss_dssp CCSH-HHHHHHHHTTCSCEEECGGGGG
T ss_pred CCCH-HHHHHHHHcCCCEEEEcHHHHc
Confidence 3 32 2456777889999999998874
No 101
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.53 E-value=0.069 Score=57.54 Aligned_cols=198 Identities=14% Similarity=0.156 Sum_probs=112.5
Q ss_pred hCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhh---cCCcEEEeCCCC--------------------CCCH
Q 012478 108 SGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQA---VSIPVIGDGDNG--------------------YGNA 164 (462)
Q Consensus 108 aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra---~~iPVIaD~DtG--------------------yG~~ 164 (462)
-|+-.|.+.+..++....++|..-.+.-++.+..-+.++++ .+.++++=+=++ ...+
T Consensus 49 gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~ps~~~~~~~~~~p 128 (671)
T 1ps9_A 49 HGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQEGGKIALQILHTGRYSYQPHLVAPSALQAPINRFVP 128 (671)
T ss_dssp TTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHHHHHHHHHTTCCEEEEECCCGGGSBSTTCEESSSCCCTTCSSCC
T ss_pred CCCCEEEecccccCccccCCCCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeccCCcccCCCCCcCCCCcccccCCCCC
Confidence 37877777665544333456654333334555555555543 245555443221 1112
Q ss_pred ------------HHHHHHHHHHHHhCccEEEeCCCC-----------CCCCCCCCCCCccc-CHHHHHHHHHHHHHHHHh
Q 012478 165 ------------MNVKRTVKGYIKAGFAGIILEDQV-----------SPKGCGHTRGRKVV-SREEAVMRIKAAVDARKE 220 (462)
Q Consensus 165 ------------~nv~rtVk~l~~AGaaGI~IEDq~-----------~PKrCGH~~gk~Lv-p~ee~~~kI~AA~~Ar~~ 220 (462)
....+.++..+++|++||.|-..- ..||...-+|- +- ..+-..+.|+|++++
T Consensus 129 ~~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs-~~~r~r~~~eiv~avr~~--- 204 (671)
T 1ps9_A 129 HELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGD-YRNRMRFAVEVVRAVRER--- 204 (671)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSS-HHHHHHHHHHHHHHHHHH---
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCc-HHHHHHHHHHHHHHHHHH---
Confidence 345566788889999999996531 12333222332 21 122344455555544
Q ss_pred hCCCeEEEEecchh----hcccHHHHHHHHHHhHhcCCcEEEec-----CC-C----------CHHHHHHHHHhCCCCce
Q 012478 221 SGSDIVIVARTDSR----QALSLEESLRRSRAFADAGADVLFID-----AL-A----------SKEEMKAFCEISPLVPK 280 (462)
Q Consensus 221 ~g~d~vIiARTDA~----~~~gldeAI~RakAy~eAGAD~Ifie-----~~-~----------s~eei~~i~~~v~~vP~ 280 (462)
.|+++.|.-|.... ....++++++-+++++++|+|.|-+. .. + ..+.++++.+.+. +|+
T Consensus 205 vG~~~~v~vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-iPv 283 (671)
T 1ps9_A 205 VGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVS-LPL 283 (671)
T ss_dssp HCSSSEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCS-SCE
T ss_pred cCCCceEEEEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcC-ceE
Confidence 36788888776542 13457899999999999999999662 11 1 1345666666664 676
Q ss_pred eeeeeecCCC-CCCCCHHHHHhcC-CCEEeccchHHH
Q 012478 281 MANMLEGGGK-TPILNPLELEELG-FKLVAYPLSLIG 315 (462)
Q Consensus 281 ~~N~l~~~g~-tP~ls~~eL~~lG-v~~V~yp~~ll~ 315 (462)
+.| ++- +| -..+++-+.| +..|.++-.++.
T Consensus 284 i~~----Ggi~~~-~~a~~~l~~g~aD~V~~gR~~l~ 315 (671)
T 1ps9_A 284 VTT----NRINDP-QVADDILSRGDADMVSMARPFLA 315 (671)
T ss_dssp EEC----SSCCSH-HHHHHHHHTTSCSEEEESTHHHH
T ss_pred EEe----CCCCCH-HHHHHHHHcCCCCEEEeCHHHHh
Confidence 543 232 22 1345555566 999999887664
No 102
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=96.50 E-value=0.026 Score=56.14 Aligned_cols=124 Identities=18% Similarity=0.221 Sum_probs=88.2
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccH
Q 012478 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (462)
Q Consensus 160 GyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gl 239 (462)
|++++....+.++++.+.|..+++| ++|| +.++-+++|+|++++ |+++.| |-|+.....+
T Consensus 136 ~~~~~~~~~~~a~~~~~~Gf~~iKi-------k~g~-------~~~~d~~~v~avr~~----g~~~~l--~vDan~~~~~ 195 (345)
T 2zad_A 136 GIDTVENRVKEAKKIFEEGFRVIKI-------KVGE-------NLKEDIEAVEEIAKV----TRGAKY--IVDANMGYTQ 195 (345)
T ss_dssp CSCCHHHHHHHHHHHHHTTCSEEEE-------ECCS-------CHHHHHHHHHHHHHH----STTCEE--EEECTTCSCH
T ss_pred cCCCHHHHHHHHHHHHHcCcCEEEE-------eecC-------CHHHHHHHHHHHHhh----CCCCeE--EEECCCCCCH
Confidence 4567878888889999999999998 2455 456678888888776 456666 5688777889
Q ss_pred HHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHh---cC-CCEEeccc
Q 012478 240 EESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE---LG-FKLVAYPL 311 (462)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~---lG-v~~V~yp~ 311 (462)
+++++-++++.+.|.+..|+|-+ .+.+.++++.+.++ +|+..+ +. ..+.+++.+ .| ++.|..=.
T Consensus 196 ~~a~~~~~~l~~~~i~~~~iE~P~~~~~~~~~~~l~~~~~-ipia~d-----E~--~~~~~~~~~~i~~~~~d~v~ik~ 266 (345)
T 2zad_A 196 KEAVEFARAVYQKGIDIAVYEQPVRREDIEGLKFVRFHSP-FPVAAD-----ES--ARTKFDVMRLVKEEAVDYVNIKL 266 (345)
T ss_dssp HHHHHHHHHHHHTTCCCSEEECCSCTTCHHHHHHHHHHSS-SCEEES-----TT--CCSHHHHHHHHHHTCCSEEEECH
T ss_pred HHHHHHHHHHHhcCCCeeeeeCCCCcccHHHHHHHHHhCC-CCEEEe-----CC--cCCHHHHHHHHHhCCCCEEEEec
Confidence 99999999999998873366654 35678888888775 676532 22 235555444 35 66666533
No 103
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=96.49 E-value=0.053 Score=54.24 Aligned_cols=127 Identities=21% Similarity=0.299 Sum_probs=90.1
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccH
Q 012478 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (462)
Q Consensus 160 GyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gl 239 (462)
|.+++....+.++++.++|..+|+| ++|| +.++.+++|++++++. |+++.| |-|+.....+
T Consensus 138 ~~~~~~~~~~~a~~~~~~Gf~~iKi-------k~g~-------~~~~~~e~v~avr~a~---g~~~~l--~vDan~~~~~ 198 (369)
T 2p8b_A 138 SIADPENMAEEAASMIQKGYQSFKM-------KVGT-------NVKEDVKRIEAVRERV---GNDIAI--RVDVNQGWKN 198 (369)
T ss_dssp CSCCHHHHHHHHHHHHHTTCCEEEE-------ECCS-------CHHHHHHHHHHHHHHH---CTTSEE--EEECTTTTBS
T ss_pred cCCChHHHHHHHHHHHHcCcCEEEE-------EeCC-------CHHHHHHHHHHHHHHh---CCCCeE--EEECCCCCCH
Confidence 4467878888889999999999998 2454 3577788888888774 567766 6777777778
Q ss_pred HHHH-HHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHH---hc-CCCEEeccc
Q 012478 240 EESL-RRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE---EL-GFKLVAYPL 311 (462)
Q Consensus 240 deAI-~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~---~l-Gv~~V~yp~ 311 (462)
++++ +-++++.+.|.+. +|-+ .+.+.++++.+.++ +|+..+ +. ..+.+++. +. .++.|..-.
T Consensus 199 ~~a~~~~~~~l~~~~i~~--iEqP~~~~d~~~~~~l~~~~~-iPI~~d-----E~--~~~~~~~~~~i~~~~~d~v~ik~ 268 (369)
T 2p8b_A 199 SANTLTALRSLGHLNIDW--IEQPVIADDIDAMAHIRSKTD-LPLMID-----EG--LKSSREMRQIIKLEAADKVNIKL 268 (369)
T ss_dssp HHHHHHHHHTSTTSCCSC--EECCBCTTCHHHHHHHHHTCC-SCEEES-----TT--CCSHHHHHHHHHHTCCSEEEECH
T ss_pred HHHHHHHHHHHHhCCCcE--EECCCCcccHHHHHHHHHhCC-CCEEeC-----CC--CCCHHHHHHHHHhCCCCEEEeec
Confidence 9999 9999999998874 5543 35678888888775 676543 22 23554444 33 477777755
Q ss_pred hHHH
Q 012478 312 SLIG 315 (462)
Q Consensus 312 ~ll~ 315 (462)
.-..
T Consensus 269 ~~~G 272 (369)
T 2p8b_A 269 MKCG 272 (369)
T ss_dssp HHHT
T ss_pred chhC
Confidence 5443
No 104
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=96.48 E-value=0.55 Score=46.54 Aligned_cols=209 Identities=15% Similarity=0.132 Sum_probs=139.5
Q ss_pred HHHHHHHHhCCCceEecccCChHHHHH----HHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcE
Q 012478 78 AKSLRQILELPGVHQGPACFDALSAKL----VEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPV 153 (462)
Q Consensus 78 a~~LR~ll~~~~~iv~p~ayDalSArl----~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPV 153 (462)
.+-|+...+.+--+-+.|+++.-+++. +|+.+.+.|+-.+-+.. ...| ++.+...++.+++..++||
T Consensus 7 ~~ll~~A~~~~yAv~AfNv~n~e~~~avl~AAe~~~sPvIlq~s~~~~-~y~g--------~~~~~~~v~~~a~~~~VPV 77 (286)
T 1gvf_A 7 KYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTF-KHIA--------LEEIYALCSAYSTTYNMPL 77 (286)
T ss_dssp HHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHHTCCCEEEECTTHH-HHSC--------HHHHHHHHHHHHHHTTSCB
T ss_pred HHHHHHHHHCCCEEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChhHH-hhcC--------HHHHHHHHHHHHHhCCCcE
Confidence 345666666666788889999888754 45668887776643322 1223 6778888888888899999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEE-----
Q 012478 154 IGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV----- 228 (462)
Q Consensus 154 IaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIi----- 228 (462)
..=.|+|. + .+.+++.+++|...|.| |.. | .|.||=+++-+..++.....| .-|=
T Consensus 78 alHlDHg~-~----~e~i~~ai~~GFtSVMi-DgS------~------lp~eeNi~~Tk~vv~~ah~~g--vsVEaElG~ 137 (286)
T 1gvf_A 78 ALHLDHHE-S----LDDIRRKVHAGVRSAMI-DGS------H------FPFAENVKLVKSVVDFCHSQD--CSVEAELGR 137 (286)
T ss_dssp EEEEEEEC-C----HHHHHHHHHTTCCEEEE-CCT------T------SCHHHHHHHHHHHHHHHHHTT--CEEEEEESC
T ss_pred EEEcCCCC-C----HHHHHHHHHcCCCeEEE-CCC------C------CCHHHHHHHHHHHHHHHHHcC--CEEEEEEee
Confidence 99999984 3 45566778899999999 442 3 356777777777776665432 1111
Q ss_pred -Ee-cchh-------hcccHHHHHHHHHHhH-hcCCcEEEec-----CC------CCHHHHHHHHHhCCCCceeeeeeec
Q 012478 229 -AR-TDSR-------QALSLEESLRRSRAFA-DAGADVLFID-----AL------ASKEEMKAFCEISPLVPKMANMLEG 287 (462)
Q Consensus 229 -AR-TDA~-------~~~gldeAI~RakAy~-eAGAD~Ifie-----~~------~s~eei~~i~~~v~~vP~~~N~l~~ 287 (462)
+- -|.. .-.+.+ .|+.|. +.|+|++-+- |. -+.+.++++.+.++ +|+ ++.|
T Consensus 138 vgg~ed~~~~~~~~~~~T~Pe----ea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~~~-vpL---VlHG 209 (286)
T 1gvf_A 138 LGGVEDDMSVDAESAFLTDPQ----EAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVD-VPL---VLHG 209 (286)
T ss_dssp CC-----------CCSSCCHH----HHHHHHHHHCCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHHCC-SCE---EECC
T ss_pred ccCcccCcccccccccCCCHH----HHHHHHHHHCCCEEEeecCccccCcCCCCccCHHHHHHHHHhcC-CCE---EEEC
Confidence 11 1110 002233 355555 6999988652 32 25688999998876 665 3454
Q ss_pred CCCCCCCCHHHHH---hcCCCEEeccchHHHHHHHHHHHHHH
Q 012478 288 GGKTPILNPLELE---ELGFKLVAYPLSLIGVSVRAMQDALT 326 (462)
Q Consensus 288 ~g~tP~ls~~eL~---~lGv~~V~yp~~ll~aa~~Am~~~l~ 326 (462)
+. .++.++++ ++|+.-|-+..-+..+...++++.+.
T Consensus 210 gS---G~~~e~i~~ai~~Gv~KiNi~Tdl~~a~~~~~r~~~~ 248 (286)
T 1gvf_A 210 AS---DVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFA 248 (286)
T ss_dssp CT---TCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHH
T ss_pred CC---CCCHHHHHHHHHCCCeEEEEChHHHHHHHHHHHHHHH
Confidence 32 34666655 67999999999999999999888864
No 105
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=96.46 E-value=0.038 Score=55.69 Aligned_cols=124 Identities=15% Similarity=0.198 Sum_probs=88.6
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccH
Q 012478 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (462)
Q Consensus 160 GyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gl 239 (462)
|.+++....+.++++.++|..+|+| ++|| +.++.+++|++++++. |+++.|. .|+.....+
T Consensus 142 ~~~~~~~~~~~a~~~~~~Gf~~iKi-------k~g~-------~~~~~~e~v~avr~a~---g~d~~l~--vDan~~~~~ 202 (379)
T 2rdx_A 142 PQRSEAETRAELARHRAAGYRQFQI-------KVGA-------DWQSDIDRIRACLPLL---EPGEKAM--ADANQGWRV 202 (379)
T ss_dssp CCSCSHHHHHHHHHHHHTTCCEEEE-------ECCS-------CHHHHHHHHHHHGGGS---CTTCEEE--EECTTCSCH
T ss_pred cCCCHHHHHHHHHHHHHcCCCEEEE-------eccC-------CHHHHHHHHHHHHHhc---CCCCEEE--EECCCCCCH
Confidence 3456777888889999999999999 3566 4567788888887663 5677663 477677789
Q ss_pred HHHHHHHHHhHhcCCcEEEecCC-CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhc----CCCEEeccchH
Q 012478 240 EESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEEL----GFKLVAYPLSL 313 (462)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~l----Gv~~V~yp~~l 313 (462)
+++++-++++.+.|. |+|-+ ++.+.++++.+.++ +|+..+ +. ..+.++++++ .++.|..-...
T Consensus 203 ~~a~~~~~~l~~~~i---~iE~P~~~~~~~~~l~~~~~-iPI~~d-----e~--i~~~~~~~~~i~~~~~d~v~ik~~~ 270 (379)
T 2rdx_A 203 DNAIRLARATRDLDY---ILEQPCRSYEECQQVRRVAD-QPMKLD-----EC--VTGLHMAQRIVADRGAEICCLKISN 270 (379)
T ss_dssp HHHHHHHHHTTTSCC---EEECCSSSHHHHHHHHTTCC-SCEEEC-----TT--CCSHHHHHHHHHHTCCSEEEEETTT
T ss_pred HHHHHHHHHHHhCCe---EEeCCcCCHHHHHHHHhhCC-CCEEEe-----CC--cCCHHHHHHHHHcCCCCEEEEeccc
Confidence 999999999999986 56543 47788889988775 676543 22 2355555543 47888775543
No 106
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=96.45 E-value=0.036 Score=55.73 Aligned_cols=138 Identities=20% Similarity=0.187 Sum_probs=83.6
Q ss_pred HHHHHHHHHhCccEEEeCCCCC--------C---CCCCCCCCCcccC-HHHHHHHHHHHHHHHHhhCCCeEEEEecchh-
Q 012478 168 KRTVKGYIKAGFAGIILEDQVS--------P---KGCGHTRGRKVVS-REEAVMRIKAAVDARKESGSDIVIVARTDSR- 234 (462)
Q Consensus 168 ~rtVk~l~~AGaaGI~IEDq~~--------P---KrCGH~~gk~Lvp-~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~- 234 (462)
.+.+++..++|++||.|-..-. | +|+..-+| .+-. ..-..+.|+|++++ .|+++.|.-|....
T Consensus 155 ~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGG-slenR~r~~~eiv~aVR~a---vG~d~pV~vRls~~~ 230 (349)
T 3hgj_A 155 VEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGG-SLENRMRFPLQVAQAVREV---VPRELPLFVRVSATD 230 (349)
T ss_dssp HHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHHH---SCTTSCEEEEEESCC
T ss_pred HHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCc-CHHHHHHHHHHHHHHHHHH---hcCCceEEEEecccc
Confidence 3445667789999999966421 2 33332233 1211 12234444555444 46788777786552
Q ss_pred ---hcccHHHHHHHHHHhHhcCCcEEEecC--C-----------CCHHHHHHHHHhCCCCceeeeeeecCCC-CCCCCHH
Q 012478 235 ---QALSLEESLRRSRAFADAGADVLFIDA--L-----------ASKEEMKAFCEISPLVPKMANMLEGGGK-TPILNPL 297 (462)
Q Consensus 235 ---~~~gldeAI~RakAy~eAGAD~Ifie~--~-----------~s~eei~~i~~~v~~vP~~~N~l~~~g~-tP~ls~~ 297 (462)
....++++++-++.+.++|+|.|-+.. . ...+.++++.+.++ +|++.| ++- +| -..+
T Consensus 231 ~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~-iPVi~~----Ggi~t~-e~a~ 304 (349)
T 3hgj_A 231 WGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVG-LRTGAV----GLITTP-EQAE 304 (349)
T ss_dssp CSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHC-CEEEEC----SSCCCH-HHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcC-ceEEEE----CCCCCH-HHHH
Confidence 134578999999999999999987752 0 13456777777664 566543 231 11 1345
Q ss_pred HHHhcC-CCEEeccchHHH
Q 012478 298 ELEELG-FKLVAYPLSLIG 315 (462)
Q Consensus 298 eL~~lG-v~~V~yp~~ll~ 315 (462)
++-+.| +..|.++-.++.
T Consensus 305 ~~l~~G~aD~V~iGR~~la 323 (349)
T 3hgj_A 305 TLLQAGSADLVLLGRVLLR 323 (349)
T ss_dssp HHHHTTSCSEEEESTHHHH
T ss_pred HHHHCCCceEEEecHHHHh
Confidence 555667 899999876654
No 107
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=96.43 E-value=0.097 Score=53.20 Aligned_cols=165 Identities=10% Similarity=-0.008 Sum_probs=103.6
Q ss_pred CCHHHHHHHHHHHHhhcCCcEEEeCCCCCC-CHHHHHHHHHHHH---HhCccEEEeCCCCCCCCCCCCC-CCcc-cCHHH
Q 012478 133 ISYGEMVDQGQLITQAVSIPVIGDGDNGYG-NAMNVKRTVKGYI---KAGFAGIILEDQVSPKGCGHTR-GRKV-VSREE 206 (462)
Q Consensus 133 vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG-~~~nv~rtVk~l~---~AGaaGI~IEDq~~PKrCGH~~-gk~L-vp~ee 206 (462)
..++.++++.+...+..+.||++-+ +| ++....+.++++. ++|+++|.|-=. |-+.. +..+ .+.+.
T Consensus 109 ~G~~~~~~~l~~~~~~~~~pvivsI---~G~~~~d~~~~a~~l~~~~~~g~d~ielNis-----CPn~~gg~~l~~~~e~ 180 (354)
T 4ef8_A 109 NGFDFYLAYAAEQHDYGKKPLFLSM---SGLSMRENVEMCKRLAAVATEKGVILELNLS-----CPNVPGKPQVAYDFDA 180 (354)
T ss_dssp CCHHHHHHHHHHTCCTTTCCEEEEE---CCSSHHHHHHHHHHHHHHHHHHCCEEEEECS-----SCCSTTSCCGGGSHHH
T ss_pred cCHHHHHHHHHHHhhcCCCcEEEEe---ccCCHHHHHHHHHHHhhhhhcCCCEEEEeCC-----CCCCCCchhhccCHHH
Confidence 4577888777665444578999876 34 5667777777777 689999988654 33322 2334 35566
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcC-CcEEEe----------c--CC-----------
Q 012478 207 AVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAG-ADVLFI----------D--AL----------- 262 (462)
Q Consensus 207 ~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAG-AD~Ifi----------e--~~----------- 262 (462)
..+-+++++++. +.++.|--|-+- +.++..+-+..+.++| ||.|.+ + .-
T Consensus 181 ~~~il~av~~~~---~~PV~vKi~p~~----d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~g 253 (354)
T 4ef8_A 181 MRQCLTAVSEVY---PHSFGVKMPPYF----DFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFG 253 (354)
T ss_dssp HHHHHHHHHHHC---CSCEEEEECCCC----SHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEE
T ss_pred HHHHHHHHHHhh---CCCeEEEecCCC----CHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccC
Confidence 655666665553 346777767653 3455556677788998 999864 1 10
Q ss_pred ---------CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012478 263 ---------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316 (462)
Q Consensus 263 ---------~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~a 316 (462)
.+.+.+.++.+.++.+|+..| ||-.-.-+..+.-++|.+.|-.+..++.-
T Consensus 254 GlSG~~i~p~a~~~i~~v~~~~~~ipII~~----GGI~s~~da~~~l~aGAd~V~vgra~l~~ 312 (354)
T 4ef8_A 254 GLGGRYVLPTALANINAFYRRCPGKLIFGC----GGVYTGEDAFLHVLAGASMVQVGTALQEE 312 (354)
T ss_dssp EEEGGGGHHHHHHHHHHHHHHCTTSEEEEE----SCCCSHHHHHHHHHHTEEEEEECHHHHHH
T ss_pred CCCCCCCchHHHHHHHHHHHhCCCCCEEEE----CCcCCHHHHHHHHHcCCCEEEEhHHHHHh
Confidence 124567777777655676544 34221123445556799999988877654
No 108
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=96.41 E-value=0.071 Score=53.35 Aligned_cols=197 Identities=13% Similarity=0.073 Sum_probs=113.7
Q ss_pred eEecccCChHHH-HHHHHhCC--cEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCC-HHH
Q 012478 91 HQGPACFDALSA-KLVEKSGF--SFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGN-AMN 166 (462)
Q Consensus 91 iv~p~ayDalSA-rl~e~aGf--daI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~-~~n 166 (462)
+++.-.-|.-.| .++++.|- .++=+ |..+-. ..|. ..++.+.+..+.+|++|.=.+ + +..
T Consensus 28 iVALD~~~~~eal~l~~~l~~~v~~vKV-G~~lf~-~~G~------------~~V~~Lk~~~g~~IflDlKl~--DIpnT 91 (303)
T 3ru6_A 28 CVALDLSTKEECLQLAKELKNLDIWLKV-GLRAYL-RDGF------------KFIEELKKVDDFKIFLDLKFH--DIPNT 91 (303)
T ss_dssp EEECCCSSHHHHHHHHHHTTTSSCEEEE-CHHHHH-HHTH------------HHHHHHHHHCCCEEEEEEEEC--SCHHH
T ss_pred EEEeCCCCHHHHHHHHHHhCCCccEEEe-CHHHHH-HhCH------------HHHHHHHHhhCCCEEEEeeec--cCchh
Confidence 455555566555 45566552 33333 444321 2342 123444444478999998874 4 334
Q ss_pred HHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEE---ec--chh-----hc
Q 012478 167 VKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA---RT--DSR-----QA 236 (462)
Q Consensus 167 v~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiA---RT--DA~-----~~ 236 (462)
+.+.++.+.++||+.+.+--.. | .+-|++++++.++.+....++| -| +.. ..
T Consensus 92 v~~av~~~a~lGaD~vTVHa~~---------G---------~~~m~aa~e~a~~~~~~~~llaVtvLTS~s~~~l~~l~~ 153 (303)
T 3ru6_A 92 MADACEEVSKLGVDMINIHASA---------G---------KIAIQEVMTRLSKFSKRPLVLAVSALTSFDEENFFSIYR 153 (303)
T ss_dssp HHHHHHHHHTTTCSEEEEEGGG---------C---------HHHHHHHHHHHTTSSSCCEEEEECSCTTCCHHHHHHHHS
T ss_pred HHHHHHHHHhcCCCEEEEeccC---------C---------HHHHHHHHHHHHhcCCCceEEEEEEecCCCHHHHHHHHc
Confidence 5667788889999999883321 1 2245566666554333333333 33 211 11
Q ss_pred ccH-HHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCC----------CCHHHHHhcCCC
Q 012478 237 LSL-EESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPI----------LNPLELEELGFK 305 (462)
Q Consensus 237 ~gl-deAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~----------ls~~eL~~lGv~ 305 (462)
.++ +.++++|+...++|.|.++... .|++.+.+..+ +.++-+++ |-.|. .++++..+.|.+
T Consensus 154 ~~~~e~V~~lA~~a~~~G~dGvV~s~----~E~~~IR~~~~--~~fl~VTP--GIr~qG~~~~DQ~Rv~t~~~a~~aGAd 225 (303)
T 3ru6_A 154 QKIEEAVINFSKISYENGLDGMVCSV----FESKKIKEHTS--SNFLTLTP--GIRPFGETNDDQKRVANLAMARENLSD 225 (303)
T ss_dssp SCHHHHHHHHHHHHHHTTCSEEECCT----TTHHHHHHHSC--TTSEEEEC--CCCTTC--------CCSHHHHHHTTCS
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEECH----HHHHHHHHhCC--CccEEECC--CcCcccCCcccccccCCHHHHHHcCCC
Confidence 223 4467889999999999987632 24556656554 22332333 33332 488999999999
Q ss_pred EEeccchHHHHH--HHHHHHHHHHHH
Q 012478 306 LVAYPLSLIGVS--VRAMQDALTAIK 329 (462)
Q Consensus 306 ~V~yp~~ll~aa--~~Am~~~l~~l~ 329 (462)
.++.|...+.+. ..+++.....|.
T Consensus 226 ~iVvGr~I~~a~dp~~a~~~i~~~i~ 251 (303)
T 3ru6_A 226 YIVVGRPIYKNENPRAVCEKILNKIH 251 (303)
T ss_dssp EEEECHHHHTSSCHHHHHHHHHHHHC
T ss_pred EEEEChHHhCCCCHHHHHHHHHHHHH
Confidence 999998887652 344444444553
No 109
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=96.37 E-value=0.054 Score=54.16 Aligned_cols=129 Identities=19% Similarity=0.332 Sum_probs=91.8
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccH
Q 012478 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (462)
Q Consensus 160 GyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gl 239 (462)
|.+++....+.++++.+.|..+++|- +||. +.++.+++|++++++. |+++.| +.|+.....+
T Consensus 137 ~~~~~~~~~~~a~~~~~~Gf~~iKik-------~g~~------~~~~d~~~v~avr~a~---g~~~~l--~vDan~~~~~ 198 (366)
T 1tkk_A 137 SVNSPEEMAADAENYLKQGFQTLKIK-------VGKD------DIATDIARIQEIRKRV---GSAVKL--RLDANQGWRP 198 (366)
T ss_dssp CSCCHHHHHHHHHHHHHHTCCEEEEE-------CCSS------CHHHHHHHHHHHHHHH---CSSSEE--EEECTTCSCH
T ss_pred cCCCHHHHHHHHHHHHHcCCCeEEEE-------eCCC------CHHHHHHHHHHHHHHh---CCCCeE--EEECCCCCCH
Confidence 44678788888888999999999982 4541 3567788898888774 567766 5677777789
Q ss_pred HHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHh---cC-CCEEeccch
Q 012478 240 EESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE---LG-FKLVAYPLS 312 (462)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~---lG-v~~V~yp~~ 312 (462)
+++++-++++.+.|.+..|+|-+ .+.+.++++.+.++ +|+..+ +. ..+.+++.+ .| ++.|..-..
T Consensus 199 ~~a~~~~~~l~~~~~~i~~iEqP~~~~d~~~~~~l~~~~~-ipIa~d-----E~--~~~~~~~~~~i~~~~~d~v~ik~~ 270 (366)
T 1tkk_A 199 KEAVTAIRKMEDAGLGIELVEQPVHKDDLAGLKKVTDATD-TPIMAD-----ES--VFTPRQAFEVLQTRSADLINIKLM 270 (366)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCSCTTCHHHHHHHHHHCS-SCEEEC-----TT--CCSHHHHHHHHHHTCCSEEEECHH
T ss_pred HHHHHHHHHHhhcCCCceEEECCCCcccHHHHHHHHhhCC-CCEEEc-----CC--CCCHHHHHHHHHhCCCCEEEeehh
Confidence 99999999999966667788864 36778888988875 676543 21 235555444 34 777777554
Q ss_pred HH
Q 012478 313 LI 314 (462)
Q Consensus 313 ll 314 (462)
-.
T Consensus 271 ~~ 272 (366)
T 1tkk_A 271 KA 272 (366)
T ss_dssp HH
T ss_pred hh
Confidence 43
No 110
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=96.31 E-value=0.1 Score=51.76 Aligned_cols=134 Identities=12% Similarity=0.106 Sum_probs=86.9
Q ss_pred HHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEE--ecchhhc-ccH-HHHHH
Q 012478 169 RTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA--RTDSRQA-LSL-EESLR 244 (462)
Q Consensus 169 rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiA--RTDA~~~-~gl-deAI~ 244 (462)
..++...++||++|++=--. +. -.|..++.+.|+.+++..++.|..+++.- |-..... .+- +-..+
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~------~~----d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~ 181 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLW------RS----DEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIID 181 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEE------CT----TSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHH
T ss_pred hhHHHHHHcCCCEEEEEEEc------CC----CccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHH
Confidence 44677788999999942211 00 01237788888888888887776776653 2222211 122 33444
Q ss_pred HHHHhHhcCCcEEEecCC----CCHHHHHHHHHh----CCCCceeeeeeecCCCCCCC---CHHHHHhcCCCEEeccchH
Q 012478 245 RSRAFADAGADVLFIDAL----ASKEEMKAFCEI----SPLVPKMANMLEGGGKTPIL---NPLELEELGFKLVAYPLSL 313 (462)
Q Consensus 245 RakAy~eAGAD~Ifie~~----~s~eei~~i~~~----v~~vP~~~N~l~~~g~tP~l---s~~eL~~lGv~~V~yp~~l 313 (462)
+++.+.+.|||.+-++.+ .+.++++++++. .+ +|. + ++.+ |.++.. ...+..+.|++-++++-..
T Consensus 182 aa~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~-~P~-V-v~aG-G~~~~~~~~~~~~a~~aGa~Gv~vGRaI 257 (304)
T 1to3_A 182 AAKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHIN-MPW-V-ILSS-GVDEKLFPRAVRVAMEAGASGFLAGRAV 257 (304)
T ss_dssp HHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCC-SCE-E-ECCT-TSCTTTHHHHHHHHHHTTCCEEEESHHH
T ss_pred HHHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCC-CCe-E-EEec-CCCHHHHHHHHHHHHHcCCeEEEEehHH
Confidence 589999999999988764 477888888887 43 451 1 2333 443321 2677888999999999988
Q ss_pred HHH
Q 012478 314 IGV 316 (462)
Q Consensus 314 l~a 316 (462)
+.+
T Consensus 258 ~q~ 260 (304)
T 1to3_A 258 WSS 260 (304)
T ss_dssp HGG
T ss_pred hCc
Confidence 866
No 111
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=96.29 E-value=0.023 Score=57.84 Aligned_cols=145 Identities=16% Similarity=0.149 Sum_probs=100.8
Q ss_pred chHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhh-------hccCCC---CCC-CCHHHHHHHHHH
Q 012478 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAA-------RLALPD---TGF-ISYGEMVDQGQL 144 (462)
Q Consensus 76 ~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas-------~lG~PD---~g~-vsl~Eml~~~~~ 144 (462)
..-+.|++..++-+..++-.+||..++..+++. .+++.+++.-+-+. .+|.|= +|. .|++|+...++.
T Consensus 157 egl~~l~~~~~e~Gl~~~te~~d~~~~~~l~~~-vd~lkIgAr~~~n~~LL~~va~~~kPVilk~G~~~tl~ei~~Ave~ 235 (350)
T 1vr6_A 157 KGLEYLREAADKYGMYVVTEALGEDDLPKVAEY-ADIIQIGARNAQNFRLLSKAGSYNKPVLLKRGFMNTIEEFLLSAEY 235 (350)
T ss_dssp HHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHH-CSEEEECGGGTTCHHHHHHHHTTCSCEEEECCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHh-CCEEEECcccccCHHHHHHHHccCCcEEEcCCCCCCHHHHHHHHHH
Confidence 344567777777778888899999999999999 99999997655432 346663 355 488999888776
Q ss_pred HHh----------------------------------hcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCC
Q 012478 145 ITQ----------------------------------AVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSP 190 (462)
Q Consensus 145 I~r----------------------------------a~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~P 190 (462)
|.. .+++||++|.+.+-|...-+.......+.+||.|+.||--..|
T Consensus 236 i~~~GN~~viLceRG~~typ~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H~~p 315 (350)
T 1vr6_A 236 IANSGNTKIILCERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVHPEP 315 (350)
T ss_dssp HHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHHCSGGGHHHHHHHHHHHTCSEEEEEBCSCG
T ss_pred HHHCCCCeEEEEeCCCCCCCCcChhhhhHHHHHHHHHhhCCCEEEeCCCCCcccchHHHHHHHHHHhCCCEEEEEecCCc
Confidence 642 1378999999997675332333333346689999999987654
Q ss_pred CCCCCCCCCcccCHHHHHHHHHHHHHHHHhhC
Q 012478 191 KGCGHTRGRKVVSREEAVMRIKAAVDARKESG 222 (462)
Q Consensus 191 KrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g 222 (462)
.+-- .+|+.-++++++.+-++.++.....+|
T Consensus 316 d~al-~D~~~sL~p~e~~~lv~~ir~i~~alg 346 (350)
T 1vr6_A 316 EKAL-SDGKQSLDFELFKELVQEMKKLADALG 346 (350)
T ss_dssp GGCS-SCGGGCBCHHHHHHHHHHHHHHHHHHT
T ss_pred ccCC-CchhhcCCHHHHHHHHHHHHHHHHHhC
Confidence 3221 266777788887777766666555444
No 112
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=96.21 E-value=0.084 Score=51.96 Aligned_cols=173 Identities=13% Similarity=0.144 Sum_probs=98.9
Q ss_pred ccccCCCCCccceeecceeeeeccchh--hhhhcc-cCCCCceeecccccCCCccccccCchHHHHHHHHhCCCceEec-
Q 012478 19 LFHSNSRPSSFLGINNNTISFNKTNTN--TLLLNT-ATNPGTINRTRVYRKNSTGVEACLSPAKSLRQILELPGVHQGP- 94 (462)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~Pr~~~~~R~y~rgs~~~~~a~~~a~~LR~ll~~~~~iv~p- 94 (462)
+|-..-++..+-+++|-+=-.+-+..- ..+.+. +...+|-.+.-..-+-.+-.+- ...-+..+++. +.+..++|
T Consensus 64 ~~~~~i~~~~~~~lpNTag~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~-~~tv~aa~~L~-~~Gf~Vlpy 141 (265)
T 1wv2_A 64 NLLDVIPPDRYTILPNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNV-VETLKAAEQLV-KDGFDVMVY 141 (265)
T ss_dssp ------CTTTSEEEEECTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCH-HHHHHHHHHHH-TTTCEEEEE
T ss_pred hHHhhhhhcCCEECCcCCCCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCH-HHHHHHHHHHH-HCCCEEEEE
Confidence 344444566788888876544433322 233444 6677787664332111111110 11223444444 55688887
Q ss_pred ccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHH
Q 012478 95 ACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGY 174 (462)
Q Consensus 95 ~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l 174 (462)
++=|...|+.++++|.+++.--|.-+- +-.|+ .+ .+.++.|.+..++|||+ |.|.+.+.+++ ..
T Consensus 142 ~~dd~~~akrl~~~G~~aVmPlg~pIG-sG~Gi-----~~----~~lI~~I~e~~~vPVI~--eGGI~TPsDAa----~A 205 (265)
T 1wv2_A 142 TSDDPIIARQLAEIGCIAVMPLAGLIG-SGLGI-----CN----PYNLRIILEEAKVPVLV--DAGVGTASDAA----IA 205 (265)
T ss_dssp ECSCHHHHHHHHHSCCSEEEECSSSTT-CCCCC-----SC----HHHHHHHHHHCSSCBEE--ESCCCSHHHHH----HH
T ss_pred eCCCHHHHHHHHHhCCCEEEeCCccCC-CCCCc-----CC----HHHHHHHHhcCCCCEEE--eCCCCCHHHHH----HH
Confidence 888999999999999999976342221 11222 23 23446777778899999 56788887776 44
Q ss_pred HHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHH
Q 012478 175 IKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARK 219 (462)
Q Consensus 175 ~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~ 219 (462)
.+.||+||.+--.. |..+ ++..++..++.+++|.+
T Consensus 206 meLGAdgVlVgSAI------~~a~----dP~~ma~af~~Av~aGr 240 (265)
T 1wv2_A 206 MELGCEAVLMNTAI------AHAK----DPVMMAEAMKHAIVAGR 240 (265)
T ss_dssp HHHTCSEEEESHHH------HTSS----SHHHHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEChHH------hCCC----CHHHHHHHHHHHHHHHH
Confidence 46799999984432 1111 23456666666665543
No 113
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=96.20 E-value=0.07 Score=53.26 Aligned_cols=159 Identities=14% Similarity=0.018 Sum_probs=90.6
Q ss_pred HHHHHHHHhCCcEEEec---cHHHHhhh---cc-CCCCCCCCHH----HHHHHHHHHHhhcCCcEEEeCCCC-C---C-C
Q 012478 100 LSAKLVEKSGFSFCFTS---GFSISAAR---LA-LPDTGFISYG----EMVDQGQLITQAVSIPVIGDGDNG-Y---G-N 163 (462)
Q Consensus 100 lSArl~e~aGfdaI~vS---G~avSas~---lG-~PD~g~vsl~----Eml~~~~~I~ra~~iPVIaD~DtG-y---G-~ 163 (462)
-.|+.+.++|||+|=+- |+-+.-.. .. .-|.---+++ -+++.++.|+++++.||.+.+--. | | +
T Consensus 148 ~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~g~~ 227 (338)
T 1z41_A 148 QAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKGLD 227 (338)
T ss_dssp HHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSCC
T ss_pred HHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCCCCC
Confidence 45788889999999765 33322100 00 1121112343 245667777777799999886431 1 2 3
Q ss_pred HHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHH
Q 012478 164 AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESL 243 (462)
Q Consensus 164 ~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI 243 (462)
..+..+.++.++++|++.|++-+..... .....+ +-.. -+++.+|+... +..++.+++-.. .
T Consensus 228 ~~~~~~~a~~l~~~Gvd~i~v~~~~~~~-~~~~~~-~~~~-~~~~~~ir~~~------~iPVi~~Ggi~s---------~ 289 (338)
T 1z41_A 228 IADHIGFAKWMKEQGVDLIDCSSGALVH-ADINVF-PGYQ-VSFAEKIREQA------DMATGAVGMITD---------G 289 (338)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCSSC-CCCCCC-TTTT-HHHHHHHHHHH------CCEEEECSSCCS---------H
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCcccc-CCCCCC-ccch-HHHHHHHHHHC------CCCEEEECCCCC---------H
Confidence 5678889999999999999997653100 000001 1011 23444544332 234444444321 2
Q ss_pred HHHHHhHhcC-CcEEEec--CCCCHHHHHHHHHhCC
Q 012478 244 RRSRAFADAG-ADVLFID--ALASKEEMKAFCEISP 276 (462)
Q Consensus 244 ~RakAy~eAG-AD~Ifie--~~~s~eei~~i~~~v~ 276 (462)
+.+..+.++| ||+|.+- .+.+++..+++.+..+
T Consensus 290 ~~a~~~l~~G~aD~V~iGR~~i~nPdl~~ki~~~~~ 325 (338)
T 1z41_A 290 SMAEEILQNGRADLIFIGRELLRDPFFARTAAKQLN 325 (338)
T ss_dssp HHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHTT
T ss_pred HHHHHHHHcCCceEEeecHHHHhCchHHHHHHcCCC
Confidence 3566677788 9999883 3456677777776653
No 114
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=96.19 E-value=0.22 Score=47.91 Aligned_cols=134 Identities=13% Similarity=0.079 Sum_probs=80.1
Q ss_pred CCHHHHHH---HHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHH
Q 012478 133 ISYGEMVD---QGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVM 209 (462)
Q Consensus 133 vsl~Eml~---~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~ 209 (462)
++..|+++ .++.+++..++|+|++- .. . ...++||+||||.... .|..+
T Consensus 76 l~~~~~~~~a~~l~~l~~~~~~~liInd-----~~-~------lA~~~gAdGVHLg~~d-------------l~~~~--- 127 (243)
T 3o63_A 76 LQARDELAACEILADAAHRYGALFAVND-----RA-D------IARAAGADVLHLGQRD-------------LPVNV--- 127 (243)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCEEEEES-----CH-H------HHHHHTCSEEEECTTS-------------SCHHH---
T ss_pred CCHHHHHHHHHHHHHHHHhhCCEEEEeC-----HH-H------HHHHhCCCEEEecCCc-------------CCHHH---
Confidence 45555554 45566777789999971 11 2 2446799999996543 12221
Q ss_pred HHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCC-----------CCHHHHHHHHHhCC-C
Q 012478 210 RIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL-----------ASKEEMKAFCEISP-L 277 (462)
Q Consensus 210 kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~-----------~s~eei~~i~~~v~-~ 277 (462)
++..++++.. ++.+ .+..+| +....++|||.|++-.+ ...+.++++++..+ .
T Consensus 128 -------~r~~~~~~~~-iG~S----~ht~~E----a~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~ 191 (243)
T 3o63_A 128 -------ARQILAPDTL-IGRS----THDPDQ----VAAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDD 191 (243)
T ss_dssp -------HHHHSCTTCE-EEEE----ECSHHH----HHHHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---C
T ss_pred -------HHHhhCCCCE-EEEe----CCCHHH----HHHHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCC
Confidence 1222344444 4443 234455 33345689999988432 23566777776532 3
Q ss_pred CceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012478 278 VPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 278 vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
+|+. .-||-++ -+..++.+.|+.-|..+..++.
T Consensus 192 iPvv----AiGGI~~-~ni~~~~~aGa~gvav~sai~~ 224 (243)
T 3o63_A 192 KPWF----AIGGINA-QRLPAVLDAGARRIVVVRAITS 224 (243)
T ss_dssp CCEE----EESSCCT-TTHHHHHHTTCCCEEESHHHHT
T ss_pred CCEE----EecCCCH-HHHHHHHHcCCCEEEEeHHHhC
Confidence 4532 2235544 4789999999999999887774
No 115
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=96.19 E-value=0.15 Score=50.07 Aligned_cols=171 Identities=20% Similarity=0.086 Sum_probs=101.1
Q ss_pred cCChH-HHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHH
Q 012478 96 CFDAL-SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGY 174 (462)
Q Consensus 96 ayDal-SArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l 174 (462)
-+|+. .|+..+++|+++|-+ +-.|+.-.=+++ ..+.|++.+++||+.- |+ .-++.+++ +.
T Consensus 78 ~~dp~~~A~~y~~~GA~~IsV---------ltd~~~f~Gs~~----~L~~ir~~v~lPVl~K-df-i~d~~qi~----ea 138 (272)
T 3tsm_A 78 DFDPPALAKAYEEGGAACLSV---------LTDTPSFQGAPE----FLTAARQACSLPALRK-DF-LFDPYQVY----EA 138 (272)
T ss_dssp SCCHHHHHHHHHHTTCSEEEE---------ECCSTTTCCCHH----HHHHHHHTSSSCEEEE-SC-CCSTHHHH----HH
T ss_pred CCCHHHHHHHHHHCCCCEEEE---------eccccccCCCHH----HHHHHHHhcCCCEEEC-Cc-cCCHHHHH----HH
Confidence 45665 688899999999843 222221111333 3466777889999853 22 22444444 55
Q ss_pred HHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCC
Q 012478 175 IKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGA 254 (462)
Q Consensus 175 ~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGA 254 (462)
..+||++|.| +.. .++.+++ +...+..+++|-+.++-..| .+| +....++|+
T Consensus 139 ~~~GAD~VlL-i~a------------~L~~~~l----~~l~~~a~~lGl~~lvevh~-------~eE----l~~A~~~ga 190 (272)
T 3tsm_A 139 RSWGADCILI-IMA------------SVDDDLA----KELEDTAFALGMDALIEVHD-------EAE----MERALKLSS 190 (272)
T ss_dssp HHTTCSEEEE-ETT------------TSCHHHH----HHHHHHHHHTTCEEEEEECS-------HHH----HHHHTTSCC
T ss_pred HHcCCCEEEE-ccc------------ccCHHHH----HHHHHHHHHcCCeEEEEeCC-------HHH----HHHHHhcCC
Confidence 6899999999 332 2343333 33333344455444444433 233 344558999
Q ss_pred cEEEecCC------CCHHHHHHHHHhCCC-CceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHHHH
Q 012478 255 DVLFIDAL------ASKEEMKAFCEISPL-VPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVS 317 (462)
Q Consensus 255 D~Ifie~~------~s~eei~~i~~~v~~-vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~aa 317 (462)
|.|=+... .+.+...++++.+|. +|+ +.++|-.+| =...++.++|+.-|+.|..++++.
T Consensus 191 ~iIGinnr~l~t~~~dl~~~~~L~~~ip~~~~v---IaesGI~t~-edv~~l~~~Ga~gvLVG~almr~~ 256 (272)
T 3tsm_A 191 RLLGVNNRNLRSFEVNLAVSERLAKMAPSDRLL---VGESGIFTH-EDCLRLEKSGIGTFLIGESLMRQH 256 (272)
T ss_dssp SEEEEECBCTTTCCBCTHHHHHHHHHSCTTSEE---EEESSCCSH-HHHHHHHTTTCCEEEECHHHHTSS
T ss_pred CEEEECCCCCccCCCChHHHHHHHHhCCCCCcE---EEECCCCCH-HHHHHHHHcCCCEEEEcHHHcCCc
Confidence 99977632 246778888888762 332 345432222 134567788999999999988753
No 116
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=96.16 E-value=0.13 Score=48.91 Aligned_cols=188 Identities=12% Similarity=0.107 Sum_probs=109.8
Q ss_pred ceEecccCChHHH-HHHHHhC--CcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHH
Q 012478 90 VHQGPACFDALSA-KLVEKSG--FSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMN 166 (462)
Q Consensus 90 ~iv~p~ayDalSA-rl~e~aG--fdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~n 166 (462)
.+++.-..|.-.| +++++.| .+.+=++ ..+-. ..|.+ .+ +.+.+..+.+|+.|.=.+ --+..
T Consensus 15 lilAlD~~~~~~a~~~v~~~~~~v~~~Kvg-~~lf~-~~G~~---------~v---~~l~~~~g~~v~lD~Kl~-DipnT 79 (228)
T 3m47_A 15 LILAMDLMNRDDALRVTGEVREYIDTVKIG-YPLVL-SEGMD---------II---AEFRKRFGCRIIADFKVA-DIPET 79 (228)
T ss_dssp EEEECCCCSHHHHHHHHHTTTTTCSEEEEE-HHHHH-HHCTH---------HH---HHHHHHHCCEEEEEEEEC-SCHHH
T ss_pred eEEEeCCCCHHHHHHHHHHcCCcccEEEEc-HHHHH-hcCHH---------HH---HHHHhcCCCeEEEEEeec-ccHhH
Confidence 3455565665555 5667776 5666664 33321 23431 22 233332468899998876 22455
Q ss_pred HHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcc-cHHH-HHH
Q 012478 167 VKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQAL-SLEE-SLR 244 (462)
Q Consensus 167 v~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~-glde-AI~ 244 (462)
+.+.++.+.++||+.|.+--.. | .+ -+++++++.++.|..+++...++..... .+++ +.+
T Consensus 80 v~~~~~~~~~~gad~vtvh~~~---------G------~~---~l~~~~~~~~~~g~~v~vLt~~s~~~~~~~~~~~~~~ 141 (228)
T 3m47_A 80 NEKICRATFKAGADAIIVHGFP---------G------AD---SVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADE 141 (228)
T ss_dssp HHHHHHHHHHTTCSEEEEESTT---------C------HH---HHHHHHHHHHHHTCEEEEECCCCSGGGGTTHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEeccC---------C------HH---HHHHHHHHHHhcCCCeEEEEeCCCccHHHHHHHHHHH
Confidence 7788899999999998873221 1 12 3444555544445567777887765322 2233 344
Q ss_pred HHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCC-CCCHHHHHhcCCCEEeccchHHHH
Q 012478 245 RSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTP-ILNPLELEELGFKLVAYPLSLIGV 316 (462)
Q Consensus 245 RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP-~ls~~eL~~lGv~~V~yp~~ll~a 316 (462)
.++...++|.|.+++.+ +..++++++.+..+. ..++ +.. |-.+ .-++ +..+.|.+.++.|...+.+
T Consensus 142 ~a~~a~~~G~~GvV~~a-t~~~e~~~ir~~~~~-~~~i-v~P--GI~~~g~~p-~~~~aGad~iVvGr~I~~a 208 (228)
T 3m47_A 142 IARMGVDLGVKNYVGPS-TRPERLSRLREIIGQ-DSFL-ISP--GVGAQGGDP-GETLRFADAIIVGRSIYLA 208 (228)
T ss_dssp HHHHHHHTTCCEEECCS-SCHHHHHHHHHHHCS-SSEE-EEC--C----------CGGGTCSEEEECHHHHTS
T ss_pred HHHHHHHhCCcEEEECC-CChHHHHHHHHhcCC-CCEE-Eec--CcCcCCCCH-hHHHcCCCEEEECHHHhCC
Confidence 57777899999988755 556788888876652 0122 332 2111 1145 7778999999999776653
No 117
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=96.12 E-value=0.12 Score=52.47 Aligned_cols=131 Identities=10% Similarity=0.130 Sum_probs=91.5
Q ss_pred CcEEEeCCCCCC--CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEE
Q 012478 151 IPVIGDGDNGYG--NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV 228 (462)
Q Consensus 151 iPVIaD~DtGyG--~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIi 228 (462)
+|+.+- .|+. ++....+.++++.++|..+|+|- +||. +.++.+++|++++++. |+++.|.
T Consensus 133 vp~y~~--~~~~~~~~~~~~~~a~~~~~~Gf~~vKik-------~g~~------~~~~~~e~v~avR~a~---G~~~~l~ 194 (389)
T 2oz8_A 133 VKAYAS--GLDFHLDDDAFVSLFSHAASIGYSAFKIK-------VGHR------DFDRDLRRLELLKTCV---PAGSKVM 194 (389)
T ss_dssp EEEEEE--CCBTTCCHHHHHHHHHHHHHTTCCEEEEE-------CCCS------SHHHHHHHHHHHHTTS---CTTCEEE
T ss_pred eEEEEe--CCCcCCCHHHHHHHHHHHHHhCCCEEEEc-------cCCC------CHHHHHHHHHHHHHhh---CCCCeEE
Confidence 555443 2433 67788888889999999999982 4551 3456678888887663 5677665
Q ss_pred EecchhhcccHHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhC-CCCceeeeeeecCCCCCCCCHHHHHh---
Q 012478 229 ARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEIS-PLVPKMANMLEGGGKTPILNPLELEE--- 301 (462)
Q Consensus 229 ARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v-~~vP~~~N~l~~~g~tP~ls~~eL~~--- 301 (462)
.|+.....++++++-++++.++|.++.|+|-+ .+.+.++++.+.+ + +|+..+ +. . +.+++.+
T Consensus 195 --vDan~~~~~~~a~~~~~~l~~~g~~i~~iEqP~~~~~~~~~~~l~~~~~~-iPIa~d-----E~--~-~~~~~~~~i~ 263 (389)
T 2oz8_A 195 --IDPNEAWTSKEALTKLVAIREAGHDLLWVEDPILRHDHDGLRTLRHAVTW-TQINSG-----EY--L-DLQGKRLLLE 263 (389)
T ss_dssp --EECTTCBCHHHHHHHHHHHHHTTCCCSEEESCBCTTCHHHHHHHHHHCCS-SEEEEC-----TT--C-CHHHHHHHHH
T ss_pred --EECCCCCCHHHHHHHHHHHHhcCCCceEEeCCCCCcCHHHHHHHHhhCCC-CCEEeC-----CC--C-CHHHHHHHHH
Confidence 37767778999999999999977777788764 2678888998887 4 665532 22 2 5555444
Q ss_pred cC-CCEEecc
Q 012478 302 LG-FKLVAYP 310 (462)
Q Consensus 302 lG-v~~V~yp 310 (462)
.| ++.|...
T Consensus 264 ~~~~d~v~ik 273 (389)
T 2oz8_A 264 AHAADILNVH 273 (389)
T ss_dssp TTCCSEEEEC
T ss_pred cCCCCEEEEC
Confidence 45 7777776
No 118
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=96.10 E-value=0.13 Score=51.73 Aligned_cols=133 Identities=16% Similarity=0.207 Sum_probs=92.0
Q ss_pred CcEEEeCCCCCC--CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEE
Q 012478 151 IPVIGDGDNGYG--NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV 228 (462)
Q Consensus 151 iPVIaD~DtGyG--~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIi 228 (462)
+|+.+- .|++ ++....+.++++.++|..+|+|- +||. +.++.+++|++++++. |+++.|
T Consensus 134 v~~y~~--~~~~~~~~e~~~~~a~~~~~~Gf~~iKik-------~g~~------~~~~~~e~v~avr~a~---G~d~~l- 194 (371)
T 2ovl_A 134 VPVYAG--GIDLELPVADLKTQADRFLAGGFRAIKMK-------VGRP------DLKEDVDRVSALREHL---GDSFPL- 194 (371)
T ss_dssp EEEEEE--CCBTTSCHHHHHHHHHHHHHTTCSCEEEE-------CCCS------SHHHHHHHHHHHHHHH---CTTSCE-
T ss_pred eeEEEe--CCCcCCCHHHHHHHHHHHHHcCCCEEEEC-------CCCC------CHHHHHHHHHHHHHHh---CCCCeE-
Confidence 565442 3442 67778888899999999999982 4552 3567788888888774 566655
Q ss_pred EecchhhcccHHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhc---
Q 012478 229 ARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEEL--- 302 (462)
Q Consensus 229 ARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~l--- 302 (462)
+.|+.....++++++-++++.+.|.+. +|-+ .+.+.++++.+.++ +|+..+ +. ..+.++++++
T Consensus 195 -~vDan~~~~~~~a~~~~~~l~~~~i~~--iEqP~~~~d~~~~~~l~~~~~-iPI~~d-----E~--~~~~~~~~~~i~~ 263 (371)
T 2ovl_A 195 -MVDANMKWTVDGAIRAARALAPFDLHW--IEEPTIPDDLVGNARIVRESG-HTIAGG-----EN--LHTLYDFHNAVRA 263 (371)
T ss_dssp -EEECTTCSCHHHHHHHHHHHGGGCCSE--EECCSCTTCHHHHHHHHHHHC-SCEEEC-----TT--CCSHHHHHHHHHH
T ss_pred -EEECCCCCCHHHHHHHHHHHHhcCCCE--EECCCCcccHHHHHHHHhhCC-CCEEeC-----CC--CCCHHHHHHHHHc
Confidence 457777778999999999999999885 4543 36778888888775 676543 21 2355555543
Q ss_pred -CCCEEeccchH
Q 012478 303 -GFKLVAYPLSL 313 (462)
Q Consensus 303 -Gv~~V~yp~~l 313 (462)
+++.|..-..-
T Consensus 264 ~~~d~v~ik~~~ 275 (371)
T 2ovl_A 264 GSLTLPEPDVSN 275 (371)
T ss_dssp TCCSEECCCTTT
T ss_pred CCCCEEeeCccc
Confidence 47777775443
No 119
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=96.09 E-value=1 Score=44.62 Aligned_cols=209 Identities=18% Similarity=0.186 Sum_probs=138.7
Q ss_pred HHHHHHHHhCCCceEecccCChHHHHH----HHHhCCcEEEeccHHHHhhh-ccCCCCCCCCHHHHHHHHHHHHh--hcC
Q 012478 78 AKSLRQILELPGVHQGPACFDALSAKL----VEKSGFSFCFTSGFSISAAR-LALPDTGFISYGEMVDQGQLITQ--AVS 150 (462)
Q Consensus 78 a~~LR~ll~~~~~iv~p~ayDalSArl----~e~aGfdaI~vSG~avSas~-lG~PD~g~vsl~Eml~~~~~I~r--a~~ 150 (462)
.+-|....+.+--+-+.|+++.-+++. +|+.+.+.|+-.+-+.. .. .| ++.+...++.+++ ..+
T Consensus 10 ~~ll~~A~~~~yAV~AfNv~n~e~~~avi~AAee~~sPvIlq~s~~~~-~~~~g--------~~~~~~~v~~~A~~~~~~ 80 (288)
T 3q94_A 10 KEMLNKALEGKYAVGQFNMNNLEWTQAILAAAEEEKSPVILGVSEGAA-RHMTG--------FKTVVAMVKALIEEMNIT 80 (288)
T ss_dssp HHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTTCCEEEEEEHHHH-HHTSC--------HHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHCCcEEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChhhh-hhcCC--------HHHHHHHHHHHHHhcCCC
Confidence 445666666666688899999888765 46678998886543322 12 23 3445667778888 788
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEE--
Q 012478 151 IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV-- 228 (462)
Q Consensus 151 iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIi-- 228 (462)
+||..=.|+|. + .+.+++.+++|...|.| |.. | .|.||=+++-+.+++.+...| .-|=
T Consensus 81 VPValHlDHg~-~----~e~i~~ai~~GFtSVMi-DgS------~------~p~eeNi~~Tk~vv~~ah~~g--vsVEaE 140 (288)
T 3q94_A 81 VPVAIHLDHGS-S----FEKCKEAIDAGFTSVMI-DAS------H------HPFEENVETTKKVVEYAHARN--VSVEAE 140 (288)
T ss_dssp SCEEEEEEEEC-S----HHHHHHHHHHTCSEEEE-CCT------T------SCHHHHHHHHHHHHHHHHTTT--CEEEEE
T ss_pred CcEEEECCCCC-C----HHHHHHHHHcCCCeEEE-eCC------C------CCHHHHHHHHHHHHHHHHHcC--CeEEEE
Confidence 99999999984 3 34566777899999999 543 3 467887777777777766432 2221
Q ss_pred -Eec----chhh-----cccHHHHHHHHHHhH-hcCCcEEEe-----cCC------CCHHHHHHHHHhCCCCceeeeeee
Q 012478 229 -ART----DSRQ-----ALSLEESLRRSRAFA-DAGADVLFI-----DAL------ASKEEMKAFCEISPLVPKMANMLE 286 (462)
Q Consensus 229 -ART----DA~~-----~~gldeAI~RakAy~-eAGAD~Ifi-----e~~------~s~eei~~i~~~v~~vP~~~N~l~ 286 (462)
+++ |... -.+.+| |+.|. +.|+|++-+ +|. -+.+.+++|.+.++ +|+. +.
T Consensus 141 lG~vgG~Ed~~~~~~~~yT~Pee----a~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v~-vpLV---lH 212 (288)
T 3q94_A 141 LGTVGGQEDDVIAEGVIYADPAE----CKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFTG-VPLV---LH 212 (288)
T ss_dssp ESBCBCSCSSCGGGGCBCCCHHH----HHHHHHHHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHHC-SCEE---EC
T ss_pred eeeeccccCCcCCccccCCCHHH----HHHHHHHHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhcC-CCEE---Ee
Confidence 111 1100 123344 55555 699998864 232 25788899988876 6653 45
Q ss_pred cCCCCCCCCHHHH---HhcCCCEEeccchHHHHHHHHHHHHHH
Q 012478 287 GGGKTPILNPLEL---EELGFKLVAYPLSLIGVSVRAMQDALT 326 (462)
Q Consensus 287 ~~g~tP~ls~~eL---~~lGv~~V~yp~~ll~aa~~Am~~~l~ 326 (462)
|+. .++.+++ -++|+.-|-+..-+..+...++++.+.
T Consensus 213 GgS---G~~~e~i~~ai~~Gv~KiNi~Tdl~~a~~~~~r~~~~ 252 (288)
T 3q94_A 213 GGT---GIPTADIEKAISLGTSKINVNTENQIEFTKAVREVLN 252 (288)
T ss_dssp CCT---TCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHH
T ss_pred CCC---CCCHHHHHHHHHcCCeEEEEChHHHHHHHHHHHHHHH
Confidence 432 3455554 467999999999999999999888765
No 120
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=96.08 E-value=0.082 Score=53.86 Aligned_cols=140 Identities=15% Similarity=0.109 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHhCccEEEeCCCC-----------CCCCCCCCCCCccc-CHHHHHHHHHHHHHHHHhhCCCeEEEEecc
Q 012478 165 MNVKRTVKGYIKAGFAGIILEDQV-----------SPKGCGHTRGRKVV-SREEAVMRIKAAVDARKESGSDIVIVARTD 232 (462)
Q Consensus 165 ~nv~rtVk~l~~AGaaGI~IEDq~-----------~PKrCGH~~gk~Lv-p~ee~~~kI~AA~~Ar~~~g~d~vIiARTD 232 (462)
....+.++..+++|++||.|-..- ..||...-+|- +- ...-..+.|+|++++. |++ .|..|.-
T Consensus 167 ~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGs-lenR~r~~~eiv~aVr~av---g~~-~V~vrls 241 (376)
T 1icp_A 167 NEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGS-LENRCRFALEIVEAVANEI---GSD-RVGIRIS 241 (376)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSS-HHHHHHHHHHHHHHHHHHH---CGG-GEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCcc-HHHhHHHHHHHHHHHHHHh---cCC-ceEEEec
Confidence 356677888889999999996541 01233222332 21 1223444555555553 444 3444643
Q ss_pred hh-------hcccHHHHHHHHHHhHhcCCcEEEecCCC---------CHHHHHHHHHhCCCCceeeeeeecCCCCCCCCH
Q 012478 233 SR-------QALSLEESLRRSRAFADAGADVLFIDALA---------SKEEMKAFCEISPLVPKMANMLEGGGKTPILNP 296 (462)
Q Consensus 233 A~-------~~~gldeAI~RakAy~eAGAD~Ifie~~~---------s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~ 296 (462)
.. ....++++++-+++++++|+|.|-+.+.. ..+.++++.+.++ +|++.| ++-++ -..
T Consensus 242 ~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~-iPvi~~----G~i~~-~~a 315 (376)
T 1icp_A 242 PFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYK-GTFIVA----GGYDR-EDG 315 (376)
T ss_dssp TTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCC-SCEEEE----SSCCH-HHH
T ss_pred cccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcC-CCEEEe----CCCCH-HHH
Confidence 21 12356789999999999999999775421 1123556667765 576544 23222 123
Q ss_pred HHHHhcC-CCEEeccchHHH
Q 012478 297 LELEELG-FKLVAYPLSLIG 315 (462)
Q Consensus 297 ~eL~~lG-v~~V~yp~~ll~ 315 (462)
+++-+-| +..|.++-.++.
T Consensus 316 ~~~l~~g~aD~V~~gR~~l~ 335 (376)
T 1icp_A 316 NRALIEDRADLVAYGRLFIS 335 (376)
T ss_dssp HHHHHTTSCSEEEESHHHHH
T ss_pred HHHHHCCCCcEEeecHHHHh
Confidence 4444445 888888766554
No 121
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=96.05 E-value=0.086 Score=52.84 Aligned_cols=132 Identities=19% Similarity=0.238 Sum_probs=92.0
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEe
Q 012478 151 IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVAR 230 (462)
Q Consensus 151 iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiAR 230 (462)
+|+.+=. |.+++....+.++++.++|..+++| ++|| +.++.+++|++++++ .|+++.| |
T Consensus 136 vp~~~~~--~~~~~~~~~~~a~~~~~~Gf~~iKi-------k~g~-------~~~~~~e~v~avr~a---~g~~~~l--~ 194 (371)
T 2ps2_A 136 LPLISSI--YVGEPEDMRARVAKYRAKGYKGQSV-------KISG-------EPVTDAKRITAALAN---QQPDEFF--I 194 (371)
T ss_dssp EEBEEEE--CSCCHHHHHHHHHHHHTTTCCEEEE-------ECCS-------CHHHHHHHHHHHTTT---CCTTCEE--E
T ss_pred eEEEEEe--CCCCHHHHHHHHHHHHHhChheEEe-------ecCC-------CHHHHHHHHHHHHHh---cCCCCEE--E
Confidence 5554322 3457888888889999999999998 2454 356677888887766 3567766 6
Q ss_pred cchhhcccHHHHHHHHHHh-HhcCCcEEEecCC-CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhc----CC
Q 012478 231 TDSRQALSLEESLRRSRAF-ADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEEL----GF 304 (462)
Q Consensus 231 TDA~~~~gldeAI~RakAy-~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~l----Gv 304 (462)
.|+.....++++++-++++ .+.|. |+|-+ ++.+.++++.+.++ +|+..+ +. ..+.++++++ .+
T Consensus 195 vDan~~~~~~~a~~~~~~l~~~~~i---~iE~P~~~~~~~~~l~~~~~-iPI~~d-----E~--~~~~~~~~~~i~~~~~ 263 (371)
T 2ps2_A 195 VDANGKLSVETALRLLRLLPHGLDF---ALEAPCATWRECISLRRKTD-IPIIYD-----EL--ATNEMSIVKILADDAA 263 (371)
T ss_dssp EECTTBCCHHHHHHHHHHSCTTCCC---EEECCBSSHHHHHHHHTTCC-SCEEES-----TT--CCSHHHHHHHHHHTCC
T ss_pred EECCCCcCHHHHHHHHHHHHhhcCC---cCcCCcCCHHHHHHHHhhCC-CCEEeC-----CC--cCCHHHHHHHHHhCCC
Confidence 6777777899999999999 98876 66653 47788889988775 676533 22 2355555543 47
Q ss_pred CEEeccchHH
Q 012478 305 KLVAYPLSLI 314 (462)
Q Consensus 305 ~~V~yp~~ll 314 (462)
+.|..-..-.
T Consensus 264 d~v~ik~~~~ 273 (371)
T 2ps2_A 264 EGIDLKISKA 273 (371)
T ss_dssp SEEEEEHHHH
T ss_pred CEEEechhhc
Confidence 7777755443
No 122
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=96.04 E-value=0.14 Score=50.05 Aligned_cols=199 Identities=18% Similarity=0.148 Sum_probs=110.6
Q ss_pred CceEecccCChHHH-HHHHHhCCc--EEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCH-
Q 012478 89 GVHQGPACFDALSA-KLVEKSGFS--FCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNA- 164 (462)
Q Consensus 89 ~~iv~p~ayDalSA-rl~e~aGfd--aI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~- 164 (462)
..+++.-.-|.-.| .++++.+=. .++=-|+.+-. ..|. +. ++.+.+ .+.+|++|+=.+ +.
T Consensus 6 ~LivALD~~~~~~al~l~~~l~~~v~~~~KvG~~l~~-~~G~---------~~---v~~Lk~-~g~~VflDlK~~--DIp 69 (259)
T 3tfx_A 6 PVIVALDLDNEEQLNKILSKLGDPHDVFVKVGMELFY-NAGI---------DV---IKKLTQ-QGYKIFLDLKMH--DIP 69 (259)
T ss_dssp CEEEECCCSCHHHHHHHHHTTCCGGGCEEEECHHHHH-HHCH---------HH---HHHHHH-TTCEEEEEEEEC--SCH
T ss_pred CeEEEeCCCCHHHHHHHHHHhCcccceEEEeCHHHHH-hcCH---------HH---HHHHHH-CCCcEEEEeccc--ccc
Confidence 34555566666666 444555421 22222544432 2343 12 233333 279999998874 53
Q ss_pred HHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhh---C---CCeEEEEecchhh---
Q 012478 165 MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKES---G---SDIVIVARTDSRQ--- 235 (462)
Q Consensus 165 ~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~---g---~d~vIiARTDA~~--- 235 (462)
..+...++.+.+.|++.+.+--.. | .+-|++++++.++. | +.++.+.-.-+..
T Consensus 70 nTv~~a~~~~~~~gad~vTVh~~~---------G---------~~~~~aa~~~~~~~~~~g~~~~~li~Vt~lTS~~~~~ 131 (259)
T 3tfx_A 70 NTVYNGAKALAKLGITFTTVHALG---------G---------SQMIKSAKDGLIAGTPAGHSVPKLLAVTELTSISDDV 131 (259)
T ss_dssp HHHHHHHHHHHTTTCSEEEEEGGG---------C---------HHHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHH
T ss_pred hHHHHHHHHHHhcCCCEEEEcCCC---------C---------HHHHHHHHHHHHHhcccCCCCceEEEEEEeCCCCHHH
Confidence 345667788889999999983321 1 22455566554421 2 2244343322211
Q ss_pred -------cccH-HHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCC----------CCHH
Q 012478 236 -------ALSL-EESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPI----------LNPL 297 (462)
Q Consensus 236 -------~~gl-deAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~----------ls~~ 297 (462)
...+ +.++++|+...++|+|.++.. .+|++.+.+..+ |.++-+++ |-.|. .|++
T Consensus 132 l~~~~g~~~~~~e~v~~~A~~a~~~G~dGvV~s----~~e~~~ir~~~~--~~f~~vtP--GIr~~g~~~gDQ~Rv~T~~ 203 (259)
T 3tfx_A 132 LRNEQNCRLPMAEQVLSLAKMAKHSGADGVICS----PLEVKKLHENIG--DDFLYVTP--GIRPAGNAKDDQSRVATPK 203 (259)
T ss_dssp HHHTSCBSSCHHHHHHHHHHHHHHTTCCEEECC----GGGHHHHHHHHC--SSSEEEEC--CCCCC-----------CHH
T ss_pred HHHHhCCCCCHHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHhhcC--CccEEEcC--CcCCCCCCcCCccccCCHH
Confidence 1133 356688999999999999864 245555555443 22222332 32232 4689
Q ss_pred HHHhcCCCEEeccchHHHHH--HHHHHHHHHHHH
Q 012478 298 ELEELGFKLVAYPLSLIGVS--VRAMQDALTAIK 329 (462)
Q Consensus 298 eL~~lGv~~V~yp~~ll~aa--~~Am~~~l~~l~ 329 (462)
+..+.|.+.++.|...+.+. ..+++...+.+.
T Consensus 204 ~a~~aGad~iVvGr~I~~a~dp~~a~~~i~~~~~ 237 (259)
T 3tfx_A 204 MAKEWGSSAIVVGRPITLASDPKAAYEAIKKEFN 237 (259)
T ss_dssp HHHHTTCSEEEECHHHHTSSSHHHHHHHHHHHHT
T ss_pred HHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHH
Confidence 99999999999998877652 334444444454
No 123
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=96.03 E-value=0.085 Score=49.50 Aligned_cols=148 Identities=19% Similarity=0.207 Sum_probs=84.3
Q ss_pred CCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHH---HHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHH
Q 012478 133 ISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAM---NVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVM 209 (462)
Q Consensus 133 vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~---nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~ 209 (462)
++++...+.++.|.+.+++||.+ .+|-++. ...+.++.+.++||++|++-|-. .-..+++.+
T Consensus 63 ~~~~~~~~~i~~i~~~~~~pv~~---~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~------------~~~~~~~~~ 127 (248)
T 1geq_A 63 FKLREAFWIVKEFRRHSSTPIVL---MTYYNPIYRAGVRNFLAEAKASGVDGILVVDLP------------VFHAKEFTE 127 (248)
T ss_dssp CCHHHHHHHHHHHHTTCCCCEEE---EECHHHHHHHCHHHHHHHHHHHTCCEEEETTCC------------GGGHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCEEE---EeccchhhhcCHHHHHHHHHHCCCCEEEECCCC------------hhhHHHHHH
Confidence 46778888999999888899876 1232331 12567889999999999996542 111222222
Q ss_pred HHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCc-EEEecCCC------------CHHHHHHHHHhCC
Q 012478 210 RIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGAD-VLFIDALA------------SKEEMKAFCEISP 276 (462)
Q Consensus 210 kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD-~Ifie~~~------------s~eei~~i~~~v~ 276 (462)
. + ++.|.++++..-.. ...| +++++.+. +| .|++-.++ ..+.++++.+.+.
T Consensus 128 ~---~----~~~g~~~~~~i~~~-----t~~e---~~~~~~~~-~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~~ 191 (248)
T 1geq_A 128 I---A----REEGIKTVFLAAPN-----TPDE---RLKVIDDM-TTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRICR 191 (248)
T ss_dssp H---H----HHHTCEEEEEECTT-----CCHH---HHHHHHHH-CSSEEEEECCC-------CCCHHHHHHHHHHHHHCS
T ss_pred H---H----HHhCCCeEEEECCC-----CHHH---HHHHHHhc-CCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhcC
Confidence 2 2 22344444433211 1123 33444433 56 55442211 1245667776653
Q ss_pred CCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012478 277 LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316 (462)
Q Consensus 277 ~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~a 316 (462)
+|+. .++|-+..-+..++.+.|+..|+.+..++..
T Consensus 192 -~pi~----~~GGI~~~e~i~~~~~~Gad~vivGsai~~~ 226 (248)
T 1geq_A 192 -NKVA----VGFGVSKREHVVSLLKEGANGVVVGSALVKI 226 (248)
T ss_dssp -SCEE----EESCCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred -CCEE----EEeecCCHHHHHHHHHcCCCEEEEcHHHHhh
Confidence 4543 3345432235677778899999999887765
No 124
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=96.02 E-value=0.04 Score=56.73 Aligned_cols=140 Identities=13% Similarity=0.126 Sum_probs=101.5
Q ss_pred chHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHh-------hhccCCC---CCC-CCHHHHHHHHHH
Q 012478 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISA-------ARLALPD---TGF-ISYGEMVDQGQL 144 (462)
Q Consensus 76 ~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSa-------s~lG~PD---~g~-vsl~Eml~~~~~ 144 (462)
..-+.|++..++-+..++-.+||..++..+++. ++++.+++.-+.. +.+|.|= +|. .+++|+...++.
T Consensus 193 egl~~L~~~~~~~Gl~~~te~~d~~~~~~l~~~-vd~lkIgs~~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~ 271 (385)
T 3nvt_A 193 EGLKILKRVSDEYGLGVISEIVTPADIEVALDY-VDVIQIGARNMQNFELLKAAGRVDKPILLKRGLSATIEEFIGAAEY 271 (385)
T ss_dssp HHHHHHHHHHHHHTCEEEEECCSGGGHHHHTTT-CSEEEECGGGTTCHHHHHHHHTSSSCEEEECCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEecCCHHHHHHHHhh-CCEEEECcccccCHHHHHHHHccCCcEEEecCCCCCHHHHHHHHHH
Confidence 344567776666778888999999999999988 9999999765422 2457663 466 889999988877
Q ss_pred HHh----------------------------------hcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCC
Q 012478 145 ITQ----------------------------------AVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSP 190 (462)
Q Consensus 145 I~r----------------------------------a~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~P 190 (462)
|.. .+++||++|.-.|.|...-+....+..+.+||+|+.||=-..|
T Consensus 272 i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~H~~p 351 (385)
T 3nvt_A 272 IMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVHPDP 351 (385)
T ss_dssp HHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEBCSCG
T ss_pred HHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEecCCh
Confidence 742 1468999998877776555556667777899999999976655
Q ss_pred CCCCCCCCCcccCHHHHHHHHHHHHHH
Q 012478 191 KGCGHTRGRKVVSREEAVMRIKAAVDA 217 (462)
Q Consensus 191 KrCGH~~gk~Lvp~ee~~~kI~AA~~A 217 (462)
.+-- .+++.-++++++.+-++.++..
T Consensus 352 d~a~-~D~~~sl~p~el~~lv~~i~~i 377 (385)
T 3nvt_A 352 AVAL-SDSAQQMDIPEFEEFWNAILAS 377 (385)
T ss_dssp GGCS-SCTTTSBCHHHHHHHHHHHHHH
T ss_pred hhcC-CcccccCCHHHHHHHHHHHHHH
Confidence 4433 4556667777766665555543
No 125
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=96.02 E-value=0.0054 Score=60.10 Aligned_cols=118 Identities=14% Similarity=0.096 Sum_probs=78.1
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
|.....+.++.+++. ++||.+ ||+++.-...+.+|..+-++++++ ..-|++=+- ..+.+|+
T Consensus 17 D~~~l~~lv~~li~~-v~gl~v--------~GttGE~~~Ls~~Er~~v~~~~~~-------rvpviaGvg---~~~t~~a 77 (283)
T 2pcq_A 17 DEEAFRELAQALEPL-VDGLLV--------YGSNGEGVHLTPEERARGLRALRP-------RKPFLVGLM---EETLPQA 77 (283)
T ss_dssp CHHHHHHHHHHHGGG-SSCCEE--------TCTTTTGGGSCHHHHHHHHHTCCC-------SSCCEEEEC---CSSHHHH
T ss_pred CHHHHHHHHHHHHhh-CCEEEE--------CCcCcCchhcCHHHHHHHHHHHHh-------CCcEEEeCC---CCCHHHH
Confidence 567788999999999 999987 777777778888888777776665 122333332 2357899
Q ss_pred HHHHHHhHhcCCcEEEecCC----C-CHHHHHHHHHhCC-CCcee-eeeeecCCCC-CCCCHHHHHhc
Q 012478 243 LRRSRAFADAGADVLFIDAL----A-SKEEMKAFCEISP-LVPKM-ANMLEGGGKT-PILNPLELEEL 302 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~-s~eei~~i~~~v~-~vP~~-~N~l~~~g~t-P~ls~~eL~~l 302 (462)
|+.++..+++|||++++-.+ + +.+++.+..+.+. .+|++ .|+= +.| -.++++.+.+|
T Consensus 78 i~la~~A~~~Gadavlv~~P~y~~~~~~~~l~~~f~~va~~lPiilYn~P---~~tg~~l~~~~~~~L 142 (283)
T 2pcq_A 78 EGALLEAKAAGAMALLATPPRYYHGSLGAGLLRYYEALAEKMPLFLYHVP---QNTKVDLPLEAVEAL 142 (283)
T ss_dssp HHHHHHHHHHTCSEEEECCCCTTGGGTTTHHHHHHHHHHHHSCEEEEECH---HHHCCCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEecCCcCCCCCCHHHHHHHHHHHhcCCCEEEEeCc---cccCcCCCHHHHHHH
Confidence 99999999999999987443 2 4344443332211 24653 3532 111 24677777776
No 126
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=95.99 E-value=0.32 Score=49.55 Aligned_cols=167 Identities=14% Similarity=0.133 Sum_probs=98.2
Q ss_pred CHHHHHHHHHH-HH-----hhcCCcEEEeCCCCC---C-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCC-Cccc
Q 012478 134 SYGEMVDQGQL-IT-----QAVSIPVIGDGDNGY---G-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRG-RKVV 202 (462)
Q Consensus 134 sl~Eml~~~~~-I~-----ra~~iPVIaD~DtGy---G-~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~g-k~Lv 202 (462)
..+.++++.+. .. +..+.||++-+ .|- . ++....+.++.+.. ++++|-|-=. |-+..| ..+.
T Consensus 124 G~~~~~~~l~~~~~~~~~~~~~~~pv~vni-ggn~~t~~~~~dy~~~~~~~~~-~ad~ielNis-----CPn~~G~~~l~ 196 (367)
T 3zwt_A 124 GLSVVEHRLRARQQKQAKLTEDGLPLGVNL-GKNKTSVDAAEDYAEGVRVLGP-LADYLVVNVS-----SPNTAGLRSLQ 196 (367)
T ss_dssp CHHHHHHHHHTTHHHHHHHHHTTCCEEEEE-CCCTTCSCHHHHHHHHHHHHGG-GCSEEEEECC-----CTTSTTGGGGG
T ss_pred cHHHHHHHHHHHhhhccccccCCceEEEEE-ecCCCCCcCHHHHHHHHHHHhh-hCCEEEEECC-----CCCCCCccccC
Confidence 45666665543 21 12368999987 221 1 23455566666653 6888877554 434333 2344
Q ss_pred CHHHHHHHHHHHHHHHHh----hCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCC---------------
Q 012478 203 SREEAVMRIKAAVDARKE----SGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALA--------------- 263 (462)
Q Consensus 203 p~ee~~~kI~AA~~Ar~~----~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~--------------- 263 (462)
..+.+.+-+++++++++. ...++.|--|-|- ..++..+-|++.+++|||.|.+....
T Consensus 197 ~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~----~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~ 272 (367)
T 3zwt_A 197 GKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDL----TSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSET 272 (367)
T ss_dssp SHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCC----CHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSS
T ss_pred CHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCC----CHHHHHHHHHHHHHcCCCEEEEeCCCccccccccccccccc
Confidence 555555555666665432 1234444444332 34677888999999999999986421
Q ss_pred -----------CHHHHHHHHHhCC-CCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012478 264 -----------SKEEMKAFCEISP-LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 264 -----------s~eei~~i~~~v~-~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
+.+.++++.+.++ .+|+..| ||-.-.-+..++-++|...|..+..++.
T Consensus 273 gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~----GGI~s~~da~~~l~~GAd~V~vgra~l~ 332 (367)
T 3zwt_A 273 GGLSGKPLRDLSTQTIREMYALTQGRVPIIGV----GGVSSGQDALEKIRAGASLVQLYTALTF 332 (367)
T ss_dssp SEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEE----SSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred CCcCCcccchhHHHHHHHHHHHcCCCceEEEE----CCCCCHHHHHHHHHcCCCEEEECHHHHh
Confidence 1367888888885 3676544 3422112344555689999998888754
No 127
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=95.99 E-value=0.045 Score=55.92 Aligned_cols=86 Identities=14% Similarity=0.146 Sum_probs=61.2
Q ss_pred cccCChH--HHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHH
Q 012478 94 PACFDAL--SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTV 171 (462)
Q Consensus 94 p~ayDal--SArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtV 171 (462)
.|++... -.++++.+|+|++.+---.+- -+..|. +..++...++.++.|++.+++||++.. .|||.. .+.+
T Consensus 151 ig~~~~~e~~~~~ve~~~adal~ihln~~q--e~~~p~-Gd~~~~~~~~~I~~l~~~~~~PVivK~-vg~g~s---~e~A 223 (365)
T 3sr7_A 151 IGLDKPYQAGLQAVRDLQPLFLQVHINLMQ--ELLMPE-GEREFRSWKKHLSDYAKKLQLPFILKE-VGFGMD---VKTI 223 (365)
T ss_dssp EETTSCHHHHHHHHHHHCCSCEEEEECHHH--HHTSSS-SCCCCHHHHHHHHHHHHHCCSCEEEEE-CSSCCC---HHHH
T ss_pred eCCCCCHHHHHHHHHhcCCCEEEEeccccc--cccCCC-CCCcHHHHHHHHHHHHHhhCCCEEEEE-CCCCCC---HHHH
Confidence 3555444 368889999999988832221 134443 445666777888899888999999994 688753 3456
Q ss_pred HHHHHhCccEEEeCC
Q 012478 172 KGYIKAGFAGIILED 186 (462)
Q Consensus 172 k~l~~AGaaGI~IED 186 (462)
+.++++||++|.+-.
T Consensus 224 ~~l~~aGad~I~V~g 238 (365)
T 3sr7_A 224 QTAIDLGVKTVDISG 238 (365)
T ss_dssp HHHHHHTCCEEECCC
T ss_pred HHHHHcCCCEEEEeC
Confidence 778899999999844
No 128
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=95.97 E-value=0.3 Score=49.62 Aligned_cols=128 Identities=16% Similarity=0.236 Sum_probs=92.0
Q ss_pred CCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhccc
Q 012478 159 NGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS 238 (462)
Q Consensus 159 tGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~g 238 (462)
.|+++++.+.+.++.+.+.|...+||-- |. +.++-+++|+|++++. |+++.+ +.|+.....
T Consensus 138 ~g~~~~e~~~~~a~~~~~~Gf~~~KlK~-------g~-------~~~~d~~~v~avR~a~---g~~~~L--~vDaN~~w~ 198 (379)
T 3r0u_A 138 ISCGNVAETIQNIQNGVEANFTAIKVKT-------GA-------DFNRDIQLLKALDNEF---SKNIKF--RFDANQGWN 198 (379)
T ss_dssp ECCCCHHHHHHHHHHHHHTTCCEEEEEC-------SS-------CHHHHHHHHHHHHHHC---CTTSEE--EEECTTCCC
T ss_pred ecCCCHHHHHHHHHHHHHcCCCEEeeec-------CC-------CHHHHHHHHHHHHHhc---CCCCeE--EEeCCCCcC
Confidence 4677888888888999899999999932 21 4567788999888774 556544 348888888
Q ss_pred HHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHH---HHHhcC-CCEEeccc
Q 012478 239 LEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPL---ELEELG-FKLVAYPL 311 (462)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~---eL~~lG-v~~V~yp~ 311 (462)
+++|++-++++.+.|.+..|+|-+ .+.+.++++.+..+ +|+..+-. ..+.. ++-+.| ++.+..-.
T Consensus 199 ~~~A~~~~~~l~~~~~~l~~iEeP~~~~d~~~~~~l~~~~~-iPIa~dE~-------~~~~~~~~~~i~~~a~d~v~~k~ 270 (379)
T 3r0u_A 199 LAQTKQFIEEINKYSLNVEIIEQPVKYYDIKAMAEITKFSN-IPVVADES-------VFDAKDAERVIDEQACNMINIKL 270 (379)
T ss_dssp HHHHHHHHHHHHTSCCCEEEEECCSCTTCHHHHHHHHHHCS-SCEEESTT-------CSSHHHHHHHHHTTCCSEEEECH
T ss_pred HHHHHHHHHHHhhcCCCcEEEECCCCcccHHHHHHHHhcCC-CCEEeCCc-------cCCHHHHHHHHHcCCCCEEEECc
Confidence 999999999999977788899865 25788899988876 67765422 23444 444555 56665544
Q ss_pred hH
Q 012478 312 SL 313 (462)
Q Consensus 312 ~l 313 (462)
.-
T Consensus 271 ~~ 272 (379)
T 3r0u_A 271 AK 272 (379)
T ss_dssp HH
T ss_pred cc
Confidence 43
No 129
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=95.96 E-value=0.41 Score=46.39 Aligned_cols=77 Identities=18% Similarity=0.060 Sum_probs=47.7
Q ss_pred ccCChHHHHHHHHhCCcEEEec-cHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHH
Q 012478 95 ACFDALSAKLVEKSGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKG 173 (462)
Q Consensus 95 ~ayDalSArl~e~aGfdaI~vS-G~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~ 173 (462)
.+--.-.|+.++++|++++-+- +........| + ......++.++.|++.+++|++++...|+ .+.++.
T Consensus 27 ~~~~~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~----G-~~~~~~~~~i~~i~~~~~~Pvi~~~~~~~------~~~~~~ 95 (297)
T 2zbt_A 27 DVTTPEQAVIAEEAGAVAVMALERVPADIRAQG----G-VARMSDPKIIKEIMAAVSIPVMAKVRIGH------FVEAMI 95 (297)
T ss_dssp EESSHHHHHHHHHHTCSEEEECSSCHHHHHHTT----C-CCCCCCHHHHHHHHTTCSSCEEEEEETTC------HHHHHH
T ss_pred eechHHHHHHHHHCCCcEEEeccccchHHHhhc----C-CccCCCHHHHHHHHHhcCCCeEEEeccCC------HHHHHH
Confidence 3334667788889999999762 1111000111 1 11111234566788888999998776653 455778
Q ss_pred HHHhCccEE
Q 012478 174 YIKAGFAGI 182 (462)
Q Consensus 174 l~~AGaaGI 182 (462)
++++||++|
T Consensus 96 ~~~aGad~v 104 (297)
T 2zbt_A 96 LEAIGVDFI 104 (297)
T ss_dssp HHHTTCSEE
T ss_pred HHHCCCCEE
Confidence 889999999
No 130
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=95.96 E-value=0.052 Score=55.10 Aligned_cols=125 Identities=17% Similarity=0.176 Sum_probs=88.0
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccH
Q 012478 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (462)
Q Consensus 160 GyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gl 239 (462)
|.++++...+.++++.++|..+|+| ++|+ +.++.+++|++++++. |+++.| |.|+.....+
T Consensus 142 g~~~~e~~~~~a~~~~~~Gf~~vKi-------k~g~-------~~~~~~e~v~avR~a~---g~d~~l--~vDan~~~~~ 202 (397)
T 2qde_A 142 GAGEPEAVAEEALAVLREGFHFVKL-------KAGG-------PLKADIAMVAEVRRAV---GDDVDL--FIDINGAWTY 202 (397)
T ss_dssp CCSCHHHHHHHHHHHHHHTCSCEEE-------ECCS-------CHHHHHHHHHHHHHHH---CTTSCE--EEECTTCCCH
T ss_pred CCCCHHHHHHHHHHHHHhhhhheee-------cccC-------CHHHHHHHHHHHHHhh---CCCCEE--EEECCCCCCH
Confidence 4467788888888999999999998 2343 4466788888887774 567666 6777777789
Q ss_pred HHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHH---hcC-CCEEeccch
Q 012478 240 EESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE---ELG-FKLVAYPLS 312 (462)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~---~lG-v~~V~yp~~ 312 (462)
+++++-++++.+.|.+ |+|-+ .+.+.++++.+.++ +|+..+ +. ..+.+++. +.| ++.|..-..
T Consensus 203 ~~a~~~~~~l~~~~i~--~iEqP~~~~~~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~~~d~v~ik~~ 272 (397)
T 2qde_A 203 DQALTTIRALEKYNLS--KIEQPLPAWDLDGMARLRGKVA-TPIYAD-----ES--AQELHDLLAIINKGAADGLMIKTQ 272 (397)
T ss_dssp HHHHHHHHHHGGGCCS--CEECCSCTTCHHHHHHHHTTCS-SCEEES-----TT--CCSHHHHHHHHHHTCCSEEEECHH
T ss_pred HHHHHHHHHHHhCCCC--EEECCCChhhHHHHHHHHhhCC-CCEEEe-----CC--cCCHHHHHHHHHcCCCCEEEEecc
Confidence 9999999999999887 45543 36778888888765 676532 22 23444444 334 777777444
Q ss_pred H
Q 012478 313 L 313 (462)
Q Consensus 313 l 313 (462)
-
T Consensus 273 ~ 273 (397)
T 2qde_A 273 K 273 (397)
T ss_dssp H
T ss_pred c
Confidence 3
No 131
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=95.96 E-value=0.057 Score=57.70 Aligned_cols=192 Identities=13% Similarity=0.069 Sum_probs=107.1
Q ss_pred HHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCC-CCCC----HHHHHHHHHHHH
Q 012478 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDN-GYGN----AMNVKRTVKGYI 175 (462)
Q Consensus 101 SArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~Dt-GyG~----~~nv~rtVk~l~ 175 (462)
.|+..+++|++.+++.-+.- +.-| |- .-..+++.+++|++.+++||+++.-- -+-+ ..-..+.++.+.
T Consensus 285 ~A~~~~~~Ga~~l~~~dl~~--~~~~-~~----~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l 357 (555)
T 1jvn_A 285 LAQKYYQQGADEVTFLNITS--FRDC-PL----KDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYF 357 (555)
T ss_dssp HHHHHHHTTCSEEEEEEEC-----CC-CG----GGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEeCCc--cccc-cC----CCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHH
Confidence 56777788999998773221 1111 11 12246677788888889999977321 0100 112567788999
Q ss_pred HhCccEEEeCCCCCCC-----CCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEE---Eecc---------------
Q 012478 176 KAGFAGIILEDQVSPK-----GCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV---ARTD--------------- 232 (462)
Q Consensus 176 ~AGaaGI~IEDq~~PK-----rCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIi---ARTD--------------- 232 (462)
++||+-|.|--....+ ..++ ++ . -.+++++|... .|.+.+++ +|..
T Consensus 358 ~aGad~V~igt~~~~~~~~~~~~~~--~~--~-~~~~i~~~~~~------~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~ 426 (555)
T 1jvn_A 358 RSGADKVSIGTDAVYAAEKYYELGN--RG--D-GTSPIETISKA------YGAQAVVISVDPKRVYVNSQADTKNKVFET 426 (555)
T ss_dssp HHTCSEEEECHHHHHHHHHHHHTTS--CC--C-SCSHHHHHHHH------HCGGGEEEEECEEEEEESSGGGCSSCCEEC
T ss_pred HcCCCEEEECCHHhhCchhhccccc--cc--c-CHHHHHHHHHH------hCCCcEEEEEEccccccccccccccccccc
Confidence 9999999884332110 0111 00 0 01233343222 12122222 2210
Q ss_pred ------h-------hhcccHH-----HHHHHHHHhHhcCCcEEEecCC--------CCHHHHHHHHHhCCCCceeeeeee
Q 012478 233 ------S-------RQALSLE-----ESLRRSRAFADAGADVLFIDAL--------ASKEEMKAFCEISPLVPKMANMLE 286 (462)
Q Consensus 233 ------A-------~~~~gld-----eAI~RakAy~eAGAD~Ifie~~--------~s~eei~~i~~~v~~vP~~~N~l~ 286 (462)
. ....+.+ .+++-++.++++||+.|.+.++ .+.+.++++.+.++ +|+.+|
T Consensus 427 ~~~~~~g~~~~~~~v~~~Gw~~~~~~~~~e~a~~~~~~Ga~~il~t~~~~dG~~~G~d~~li~~l~~~~~-iPVIas--- 502 (555)
T 1jvn_A 427 EYPGPNGEKYCWYQCTIKGGRESRDLGVWELTRACEALGAGEILLNCIDKDGSNSGYDLELIEHVKDAVK-IPVIAS--- 502 (555)
T ss_dssp SSCCTTCCCEEEEEEEETTTTEEEEEEHHHHHHHHHHTTCCEEEECCGGGTTTCSCCCHHHHHHHHHHCS-SCEEEC---
T ss_pred cccCCCCCcceeEEEEEecCccCCCCCHHHHHHHHHHcCCCEEEEeCCCCCCCCCCCCHHHHHHHHHhCC-ccEEEE---
Confidence 0 0011221 2577899999999999998654 46889999998875 676544
Q ss_pred cCCCCCCCCHHHHHh-cCCCEEeccchHHH
Q 012478 287 GGGKTPILNPLELEE-LGFKLVAYPLSLIG 315 (462)
Q Consensus 287 ~~g~tP~ls~~eL~~-lGv~~V~yp~~ll~ 315 (462)
||-.-.-.+.++.+ .|+.-|+.+..++.
T Consensus 503 -GGi~s~~d~~~~~~~~G~~gvivg~a~~~ 531 (555)
T 1jvn_A 503 -SGAGVPEHFEEAFLKTRADACLGAGMFHR 531 (555)
T ss_dssp -SCCCSHHHHHHHHHHSCCSEEEESHHHHT
T ss_pred -CCCCCHHHHHHHHHhcCChHHHHHHHHHc
Confidence 34221113445555 79999998876544
No 132
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=95.95 E-value=0.44 Score=47.78 Aligned_cols=131 Identities=18% Similarity=0.181 Sum_probs=89.4
Q ss_pred CCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHH
Q 012478 162 GNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEE 241 (462)
Q Consensus 162 G~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~glde 241 (462)
+++....+.++++.++|..+|+|- +||......-+.++.+++|++++++. |+++.|. .|+.....+++
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik-------~g~~~~~~~~~~~~~~e~v~avr~a~---g~d~~l~--vDan~~~~~~~ 215 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLH-------TWMPPVSWAPDVKMDLKACAAVREAV---GPDIRLM--IDAFHWYSRTD 215 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEE-------CCCTTSTTCCCHHHHHHHHHHHHHHH---CTTSEEE--EECCTTCCHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEc-------CCcCccccccchHHHHHHHHHHHHHh---CCCCeEE--EECCCCCCHHH
Confidence 467788888899999999999983 34421111125677788898888774 5677665 36666678899
Q ss_pred HHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCC-HHHHHh---cC-CCEEeccchH
Q 012478 242 SLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILN-PLELEE---LG-FKLVAYPLSL 313 (462)
Q Consensus 242 AI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls-~~eL~~---lG-v~~V~yp~~l 313 (462)
+++-++++.+.|.+. +|-+ .+.+.++++.+.++ +|+..+ +. ..+ .+++.+ .| ++.|..-..-
T Consensus 216 a~~~~~~l~~~~i~~--iE~P~~~~~~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~~i~~~~~d~v~ik~~~ 285 (382)
T 1rvk_A 216 ALALGRGLEKLGFDW--IEEPMDEQSLSSYKWLSDNLD-IPVVGP-----ES--AAGKHWHRAEWIKAGACDILRTGVND 285 (382)
T ss_dssp HHHHHHHHHTTTCSE--EECCSCTTCHHHHHHHHHHCS-SCEEEC-----SS--CSSHHHHHHHHHHTTCCSEEEECHHH
T ss_pred HHHHHHHHHhcCCCE--EeCCCChhhHHHHHHHHhhCC-CCEEEe-----CC--ccCcHHHHHHHHHcCCCCEEeeCchh
Confidence 999999999998874 5543 36788899988875 676533 22 235 555443 44 7777775544
Q ss_pred H
Q 012478 314 I 314 (462)
Q Consensus 314 l 314 (462)
.
T Consensus 286 ~ 286 (382)
T 1rvk_A 286 V 286 (382)
T ss_dssp H
T ss_pred c
Confidence 3
No 133
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=95.92 E-value=0.15 Score=49.30 Aligned_cols=161 Identities=16% Similarity=0.196 Sum_probs=90.4
Q ss_pred CHHHHHHH-HHHHHh-hcCCcEEEeCCCCCCCHHHHHHHHHHHHH-hCccEEEeCCCCCCCCCCCC--CCCc-ccCHHHH
Q 012478 134 SYGEMVDQ-GQLITQ-AVSIPVIGDGDNGYGNAMNVKRTVKGYIK-AGFAGIILEDQVSPKGCGHT--RGRK-VVSREEA 207 (462)
Q Consensus 134 sl~Eml~~-~~~I~r-a~~iPVIaD~DtGyG~~~nv~rtVk~l~~-AGaaGI~IEDq~~PKrCGH~--~gk~-Lvp~ee~ 207 (462)
+.+++++. .+.+.+ ..+.|+++-.=. +++....+.++.+.+ +|+++|.|.=. |.+. ++-. ..+.+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~p~~v~l~~--~~~~~~~~~a~~~~~~~g~d~iei~~~-----~p~~~~g~~~~g~~~~~~ 152 (311)
T 1ep3_A 80 GLEVIMTEKLPWLNENFPELPIIANVAG--SEEADYVAVCAKIGDAANVKAIELNIS-----CPNVKHGGQAFGTDPEVA 152 (311)
T ss_dssp CHHHHHHTHHHHHHHHCTTSCEEEEECC--SSHHHHHHHHHHHTTSTTEEEEEEECC-----SEEGGGTTEEGGGCHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCcEEEEEcC--CCHHHHHHHHHHHhccCCCCEEEEeCC-----CCCCCCchhhhcCCHHHH
Confidence 45565543 334444 337899887631 246778888888887 99999977321 2221 0111 1244444
Q ss_pred HHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecC--------C-C---------------
Q 012478 208 VMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDA--------L-A--------------- 263 (462)
Q Consensus 208 ~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~--------~-~--------------- 263 (462)
.+-|++++++. ++-|+.|.-. ++++..+-++.+.++|+|.|.+.+ . .
T Consensus 153 ~eii~~v~~~~-----~~pv~vk~~~----~~~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~ 223 (311)
T 1ep3_A 153 AALVKACKAVS-----KVPLYVKLSP----NVTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGP 223 (311)
T ss_dssp HHHHHHHHHHC-----SSCEEEEECS----CSSCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESG
T ss_pred HHHHHHHHHhc-----CCCEEEEECC----ChHHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCc
Confidence 55555555442 2333434321 111223347788899999998832 1 0
Q ss_pred -----CHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012478 264 -----SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 264 -----s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
..+.++++.+.+. +|+..+ ||-.-.-+..++-++|...|.++..++.
T Consensus 224 ~~~~~~~~~i~~i~~~~~-ipvia~----GGI~~~~d~~~~l~~GAd~V~vg~~~l~ 275 (311)
T 1ep3_A 224 AIKPVALKLIHQVAQDVD-IPIIGM----GGVANAQDVLEMYMAGASAVAVGTANFA 275 (311)
T ss_dssp GGHHHHHHHHHHHHTTCS-SCEEEC----SSCCSHHHHHHHHHHTCSEEEECTHHHH
T ss_pred cchHHHHHHHHHHHHhcC-CCEEEE----CCcCCHHHHHHHHHcCCCEEEECHHHHc
Confidence 0255666666653 565533 3432112455666689999999988775
No 134
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=95.89 E-value=0.35 Score=48.01 Aligned_cols=200 Identities=14% Similarity=0.091 Sum_probs=120.6
Q ss_pred CchHHHHHHHHhCCCceE-e--cccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCC
Q 012478 75 LSPAKSLRQILELPGVHQ-G--PACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSI 151 (462)
Q Consensus 75 ~~~a~~LR~ll~~~~~iv-~--p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~i 151 (462)
|.-..+|.+++.-.-|++ . .|.-+.-.|..+.++|.-.+... ..++.+++.+.++.+.+.++.
T Consensus 13 ~~~~t~~~~~l~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~--------------~~~~~~~l~~~i~~i~~~~~~ 78 (326)
T 3bo9_A 13 MTVRTRVTDLLEIEHPILMGGMAWAGTPTLAAAVSEAGGLGIIGS--------------GAMKPDDLRKAISELRQKTDK 78 (326)
T ss_dssp CCCCCHHHHHHTCSSSEEECCCTTTSCHHHHHHHHHTTSBEEEEC--------------TTCCHHHHHHHHHHHHTTCSS
T ss_pred eeecchhHHhcCCCCCEEECCCCCCCCHHHHHHHHhCCCcEEeCC--------------CCCCHHHHHHHHHHHHHhcCC
Confidence 333456777776444543 3 36667778888888885333321 235788888888888777777
Q ss_pred cEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 012478 152 PVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVART 231 (462)
Q Consensus 152 PVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiART 231 (462)
|+.+..=. .++ +..+.++.+.++|++.|++--. . | .+++++++. .+..|+...
T Consensus 79 p~gVnl~~--~~~-~~~~~~~~~~~~g~d~V~l~~g-------~-------p-~~~~~~l~~---------~g~~v~~~v 131 (326)
T 3bo9_A 79 PFGVNIIL--VSP-WADDLVKVCIEEKVPVVTFGAG-------N-------P-TKYIRELKE---------NGTKVIPVV 131 (326)
T ss_dssp CEEEEEET--TST-THHHHHHHHHHTTCSEEEEESS-------C-------C-HHHHHHHHH---------TTCEEEEEE
T ss_pred CEEEEEec--cCC-CHHHHHHHHHHCCCCEEEECCC-------C-------c-HHHHHHHHH---------cCCcEEEEc
Confidence 87665311 121 2355667788899999998221 1 2 345555432 134444332
Q ss_pred chhhcccHHHHHHHHHHhHhcCCcEEEecC---------CCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhc
Q 012478 232 DSRQALSLEESLRRSRAFADAGADVLFIDA---------LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEEL 302 (462)
Q Consensus 232 DA~~~~gldeAI~RakAy~eAGAD~Ifie~---------~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~l 302 (462)
...+ .++.+.++|||.|.+++ ..+.+.+.++.+.+. +|+++ . ||-.-.-+..++.++
T Consensus 132 -----~s~~----~a~~a~~~GaD~i~v~g~~~GG~~G~~~~~~ll~~i~~~~~-iPvia---a-GGI~~~~dv~~al~~ 197 (326)
T 3bo9_A 132 -----ASDS----LARMVERAGADAVIAEGMESGGHIGEVTTFVLVNKVSRSVN-IPVIA---A-GGIADGRGMAAAFAL 197 (326)
T ss_dssp -----SSHH----HHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCS-SCEEE---E-SSCCSHHHHHHHHHH
T ss_pred -----CCHH----HHHHHHHcCCCEEEEECCCCCccCCCccHHHHHHHHHHHcC-CCEEE---E-CCCCCHHHHHHHHHh
Confidence 1223 45667789999999965 234567778877764 56543 2 343211244566678
Q ss_pred CCCEEeccchHHHH----HHHHHHHHHHHHH
Q 012478 303 GFKLVAYPLSLIGV----SVRAMQDALTAIK 329 (462)
Q Consensus 303 Gv~~V~yp~~ll~a----a~~Am~~~l~~l~ 329 (462)
|..-|..+..++.+ +..+.++++....
T Consensus 198 GA~gV~vGs~~~~~~e~~~~~~~k~~~~~~~ 228 (326)
T 3bo9_A 198 GAEAVQMGTRFVASVESDVHPVYKEKIVKAS 228 (326)
T ss_dssp TCSEEEESHHHHTBSSCCSCHHHHHHHHHCC
T ss_pred CCCEEEechHHHcCccccccHHHHHHHHhcc
Confidence 99999999887765 3455566654443
No 135
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=95.85 E-value=0.069 Score=55.07 Aligned_cols=134 Identities=19% Similarity=0.319 Sum_probs=89.9
Q ss_pred CCcEEEeCCCCCCCH-HHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEE
Q 012478 150 SIPVIGDGDNGYGNA-MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV 228 (462)
Q Consensus 150 ~iPVIaD~DtGyG~~-~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIi 228 (462)
.+|+.+-.-+..+++ +...+.++++.++|..+|+| ++|| +.++.+++|++++++. |+++.|
T Consensus 171 ~vp~~~sg~~~~~~~~e~~~~~a~~~~~~Gf~~vKi-------k~g~-------~~~~d~e~v~avR~av---G~d~~l- 232 (428)
T 3bjs_A 171 RIPAYAGGIALGYQPKESLAEEAQEYIARGYKALKL-------RIGD-------AARVDIERVRHVRKVL---GDEVDI- 232 (428)
T ss_dssp CEEEEEESSCSCSCCHHHHHHHHHHHHHHTCSEEEE-------ECCS-------CHHHHHHHHHHHHHHH---CTTSEE-
T ss_pred ceeeeeeccccCCChHHHHHHHHHHHHHCCCCEEEE-------CCCC-------CHHHHHHHHHHHHHhc---CCCCEE-
Confidence 466655311112467 77888888999999999999 2465 4567788888887774 567766
Q ss_pred EecchhhcccHHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHH---hc
Q 012478 229 ARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE---EL 302 (462)
Q Consensus 229 ARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~---~l 302 (462)
+.|+.....++++++-++++.+.|.+ |+|-+ .+.+.++++.+.++.+|+..+ +. ..+.++++ +.
T Consensus 233 -~vDan~~~~~~eai~~~~~L~~~~i~--~iEqP~~~~d~~~~~~l~~~~~~iPIa~d-----E~--~~~~~~~~~~i~~ 302 (428)
T 3bjs_A 233 -LTDANTAYTMADARRVLPVLAEIQAG--WLEEPFACNDFASYREVAKITPLVPIAAG-----EN--HYTRFEFGQMLDA 302 (428)
T ss_dssp -EEECTTCCCHHHHHHHHHHHHHTTCS--CEECCSCTTCHHHHHHHTTTCSSSCEEEC-----TT--CCSHHHHHHHHTT
T ss_pred -EEECCCCCCHHHHHHHHHHHHhcCCC--EEECCCCccCHHHHHHHHHhCCCCcEEcC-----CC--cCCHHHHHHHHHh
Confidence 45887777899999999999999887 45543 356788888776532465432 22 23454444 44
Q ss_pred C-CCEEeccc
Q 012478 303 G-FKLVAYPL 311 (462)
Q Consensus 303 G-v~~V~yp~ 311 (462)
| ++.|..-.
T Consensus 303 ~~~d~v~ik~ 312 (428)
T 3bjs_A 303 GAVQVWQPDL 312 (428)
T ss_dssp CCEEEECCBT
T ss_pred CCCCEEEeCc
Confidence 5 56665533
No 136
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=95.78 E-value=0.12 Score=51.96 Aligned_cols=138 Identities=17% Similarity=0.135 Sum_probs=81.2
Q ss_pred HHHHHHHHHHhCccEEEeCCCC-----------CCCCCCCCCCCcccCH-HHHHHHHHHHHHHHHhhCCCeEEEEecchh
Q 012478 167 VKRTVKGYIKAGFAGIILEDQV-----------SPKGCGHTRGRKVVSR-EEAVMRIKAAVDARKESGSDIVIVARTDSR 234 (462)
Q Consensus 167 v~rtVk~l~~AGaaGI~IEDq~-----------~PKrCGH~~gk~Lvp~-ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~ 234 (462)
..+.++...++|++||.|--.- ..||...-+|- +-.. .-..+-|+|++++. ++.|..|....
T Consensus 146 f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGs-lenR~r~~~eiv~avr~~v-----~~pv~vRls~~ 219 (340)
T 3gr7_A 146 FQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGS-PENRYRFLGEVIDAVREVW-----DGPLFVRISAS 219 (340)
T ss_dssp HHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSS-HHHHHHHHHHHHHHHHHHC-----CSCEEEEEESC
T ss_pred HHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCC-HHHHHHHHHHHHHHHHHhc-----CCceEEEeccc
Confidence 3445566778999999997552 12344333332 2211 22344444544442 45556565432
Q ss_pred ----hcccHHHHHHHHHHhHhcCCcEEEecC-C-----------CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHH
Q 012478 235 ----QALSLEESLRRSRAFADAGADVLFIDA-L-----------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE 298 (462)
Q Consensus 235 ----~~~gldeAI~RakAy~eAGAD~Ifie~-~-----------~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~e 298 (462)
....+++.++-++.++++|+|.|-+.. . ...+.++++.+.+. +|+..| |+-+-.-..++
T Consensus 220 ~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~-iPVi~~----GgI~s~e~a~~ 294 (340)
T 3gr7_A 220 DYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREAD-IPTGAV----GLITSGWQAEE 294 (340)
T ss_dssp CCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTT-CCEEEE----SSCCCHHHHHH
T ss_pred cccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcC-CcEEee----CCCCCHHHHHH
Confidence 123468899999999999999998752 1 13456777878775 676644 23211012355
Q ss_pred HHhcC-CCEEeccchHHH
Q 012478 299 LEELG-FKLVAYPLSLIG 315 (462)
Q Consensus 299 L~~lG-v~~V~yp~~ll~ 315 (462)
+-+.| +..|.++-.++.
T Consensus 295 ~L~~G~aD~V~iGR~~la 312 (340)
T 3gr7_A 295 ILQNGRADLVFLGRELLR 312 (340)
T ss_dssp HHHTTSCSEEEECHHHHH
T ss_pred HHHCCCeeEEEecHHHHh
Confidence 55567 999999876553
No 137
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=95.77 E-value=0.067 Score=52.88 Aligned_cols=136 Identities=15% Similarity=0.114 Sum_probs=86.9
Q ss_pred HHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhh-cccHHHHHHHHH
Q 012478 169 RTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQ-ALSLEESLRRSR 247 (462)
Q Consensus 169 rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~-~~gldeAI~Rak 247 (462)
-..+.++++|+.+|-.-|...--..||.+. ..++.+||+...++++++.. ..+|++=+.--. ..+.+++++-+.
T Consensus 28 ~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt-~~vTldemi~h~~aV~r~~~----~~~vvaD~pfgsy~~s~~~a~~na~ 102 (275)
T 1o66_A 28 SFAALMDDAGVEMLLVGDSLGMAVQGRKST-LPVSLRDMCYHTECVARGAK----NAMIVSDLPFGAYQQSKEQAFAAAA 102 (275)
T ss_dssp HHHHHHHHTTCCEEEECTTHHHHTTCCSSS-TTCCHHHHHHHHHHHHHHCS----SSEEEEECCTTSSSSCHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECHHHHHHHcCCCCC-CCCCHHHHHHHHHHHHhhCC----CCeEEEECCCCCccCCHHHHHHHHH
Confidence 345678889999998766543234566543 46899999999999887753 234445444211 235799999999
Q ss_pred HhHhcCCcEEEecCC-CCHHHHHHHHHhCCCCcee---------eeeeec---CCCCCCC------CHHHHHhcCCCEEe
Q 012478 248 AFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKM---------ANMLEG---GGKTPIL------NPLELEELGFKLVA 308 (462)
Q Consensus 248 Ay~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~---------~N~l~~---~g~tP~l------s~~eL~~lGv~~V~ 308 (462)
.+.++||++|-+|+- .-.+.++.++++ ++|++ +|.+.+ .|++ .- ....|+++|...+.
T Consensus 103 rl~kaGa~aVklEdg~e~~~~I~al~~a--gIpV~gHiGLtPQs~~~~ggf~v~grt-~~a~~~i~rA~a~~eAGA~~iv 179 (275)
T 1o66_A 103 ELMAAGAHMVKLEGGVWMAETTEFLQMR--GIPVCAHIGLTPQSVFAFGGYKVQGRG-GKAQALLNDAKAHDDAGAAVVL 179 (275)
T ss_dssp HHHHTTCSEEEEECSGGGHHHHHHHHHT--TCCEEEEEESCGGGTTC------------CHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHcCCcEEEECCcHHHHHHHHHHHHc--CCCeEeeeccCceeecccCCeEEEeCh-HHHHHHHHHHHHHHHcCCcEEE
Confidence 999999999999985 234667777664 35655 232211 1222 11 23467788888777
Q ss_pred ccch
Q 012478 309 YPLS 312 (462)
Q Consensus 309 yp~~ 312 (462)
....
T Consensus 180 lE~v 183 (275)
T 1o66_A 180 MECV 183 (275)
T ss_dssp EESC
T ss_pred EecC
Confidence 7553
No 138
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=95.75 E-value=0.42 Score=47.56 Aligned_cols=80 Identities=18% Similarity=0.035 Sum_probs=55.4
Q ss_pred EecccCChHHHHHHHHhCCcEEEec-cHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHH
Q 012478 92 QGPACFDALSAKLVEKSGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRT 170 (462)
Q Consensus 92 v~p~ayDalSArl~e~aGfdaI~vS-G~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rt 170 (462)
+++-+-++-.|+++|++|+-++.+- +.-.---..| | +..-.=+.+++.|.+++++||++=.--|+ ..-
T Consensus 14 vimdv~~~eqa~iae~aGa~av~~l~~~p~d~r~~g----G-v~Rm~dp~~I~~I~~aVsIPVm~k~righ------~~E 82 (291)
T 3o07_A 14 VIMDVVTPEQAKIAEKSGACAVMALESIPADMRKSG----K-VCRMSDPKMIKDIMNSVSIPVMAKVRIGH------FVE 82 (291)
T ss_dssp EEEEESSHHHHHHHHHHTCSEEEECSSCHHHHHTTT----C-CCCCCCHHHHHHHHTTCSSCEEEEEETTC------HHH
T ss_pred eeeecCCHHHHHHHHHhCchhhhhccCCCchhhhcC----C-ccccCCHHHHHHHHHhCCCCeEEEEecCc------HHH
Confidence 5567788899999999999998765 2221000111 2 21111245678888999999999888887 555
Q ss_pred HHHHHHhCccEE
Q 012478 171 VKGYIKAGFAGI 182 (462)
Q Consensus 171 Vk~l~~AGaaGI 182 (462)
++.++++||+-|
T Consensus 83 Aqilea~GaD~I 94 (291)
T 3o07_A 83 AQIIEALEVDYI 94 (291)
T ss_dssp HHHHHHTTCSEE
T ss_pred HHHHHHcCCCEE
Confidence 678888999988
No 139
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=95.71 E-value=0.68 Score=48.65 Aligned_cols=263 Identities=15% Similarity=0.154 Sum_probs=144.3
Q ss_pred ceEecccCChHHHHHH----HHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCc---EEEeCCCCCC
Q 012478 90 VHQGPACFDALSAKLV----EKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIP---VIGDGDNGYG 162 (462)
Q Consensus 90 ~iv~p~ayDalSArl~----e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iP---VIaD~DtGyG 162 (462)
.+...|+.+...++.+ ++.+.+.|+-.+-......-|| ..++..++...++.++...++| |+.=.|.|--
T Consensus 22 gi~av~~~n~e~i~Ail~aAee~~sPVIIe~t~~qv~~~gGY---tG~~p~~f~~~V~~~A~~~~vPv~pV~LhlDHg~~ 98 (450)
T 3txv_A 22 GIPSICSAHPLVIEAAMLRAHREKAPVLIEATCNQVNQDGGY---TGMTPEDFTRFVGAIADRIEFPREKILLGGDHLGP 98 (450)
T ss_dssp CEEEECCCCHHHHHHHHHHHHHSCSCEEEEEETTTSCTTCTT---TTCCHHHHHHHHHHHHHHTTCCGGGEEEEEEEESS
T ss_pred EEEEeCcCCHHHHHHHHHHHHHhCCCEEEEcChhhHhhcCCC---CCCCHHHHHHHHHHHHHHcCcCcccEEEECCCCCC
Confidence 3566777788777654 5568888876542221111133 1255688889999999888888 6999999832
Q ss_pred ------CH----HHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHh----hC-CCe-E
Q 012478 163 ------NA----MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKE----SG-SDI-V 226 (462)
Q Consensus 163 ------~~----~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~----~g-~d~-v 226 (462)
++ .+..+.++.+++||...|+|.....|- ....-++.+..++|-+..++.+.+ .| .++ .
T Consensus 99 ~~w~~~~~~~am~~a~e~i~~aI~AGFtSVMiD~S~~p~-----eeNi~lt~evva~rtaeL~~~A~~~~~~~g~~e~~y 173 (450)
T 3txv_A 99 NPWKHLPADEAMAKAEAMITAYAKAGFTKLHLDTSMGCA-----GEPTALPDATTAARAARLAAVAEDAVGGRGGVLPVY 173 (450)
T ss_dssp GGGTTSCHHHHHHHHHHHHHHHHTTTCCEEEECCCBCCS-----SSCSBCCHHHHHHHHHHHHHHHHHTC------CCEE
T ss_pred cccccccHHHHHHHHHHHHHHHHHcCCCEEEECCCCCch-----hhccchhHHHHHHHHHHHHHHHHHHHhhcCCCCceE
Confidence 12 256677899999999999994443211 111223445454554444444432 12 223 3
Q ss_pred EEEecch-h-----------hcccHHH---HHHH-HHHhHhcCCc-------EEEe-cCCC---------CHHHHHHHHH
Q 012478 227 IVARTDS-R-----------QALSLEE---SLRR-SRAFADAGAD-------VLFI-DALA---------SKEEMKAFCE 273 (462)
Q Consensus 227 IiARTDA-~-----------~~~glde---AI~R-akAy~eAGAD-------~Ifi-e~~~---------s~eei~~i~~ 273 (462)
+++ |+. . .....++ .|+. ..++.+.|.| ++.+ +|+. +.+.++++.+
T Consensus 174 viG-tEvpvpGGa~~~~~~~~~T~PeeA~~fv~~~~~~f~~~gld~~w~~v~~lvVqpGt~f~~~~v~~y~~e~~~~L~~ 252 (450)
T 3txv_A 174 IIG-TEVPIPGGALEELDTLEVTAPEAAIETVRVHRAAFEEAGAAGAFSRVVGAVVQPGVEFGNENVIAYDRARAEKLSA 252 (450)
T ss_dssp EEE-CC-------------CCCCCHHHHHHHHHHHHHHHHHHTCHHHHTTEEEEECCCSCEECSSCEECCCTTTTSHHHH
T ss_pred Eee-eecCCCCccccccccCCCCCHHHHHHHHHHHHHHHHHhCcccccCceeEEEecCCcccCCCCCCCCCHHHHHHHHH
Confidence 444 322 1 1123344 3433 3457778887 5544 2321 1345666666
Q ss_pred hCCCCceeeeeeecCCCCCCCCHHHHH---hcCCCEEeccchHHHHHHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHhcC
Q 012478 274 ISPLVPKMANMLEGGGKTPILNPLELE---ELGFKLVAYPLSLIGVSVRAMQDALTAIKGGRIPSPGSMPSFQEIKETLG 350 (462)
Q Consensus 274 ~v~~vP~~~N~l~~~g~tP~ls~~eL~---~lGv~~V~yp~~ll~aa~~Am~~~l~~l~~g~~~~~~~~~s~~e~~~lvg 350 (462)
.+..+|.+ ++++ +.|...+.+.|+ +.||+.+-+++.+..+...|+.. |..|.+.-.+. ...-.+.+..+-+=
T Consensus 253 ~v~~~P~L--Vlhg-hStDy~~~e~l~~~V~~GiaklNVgp~Lt~a~reAl~a-L~~ie~~l~~~-~~~s~l~~~l~~~m 327 (450)
T 3txv_A 253 TLGQLHGM--VFEA-HSTDYQTPDALRELVADGFAILKVGPGLTFALREALYG-LDQIAAFLFPA-ARERTLAEVTEAVM 327 (450)
T ss_dssp GGGTSTTC--EEEE-SCCTTCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHH-HHHHHHHHCTT-SCSSCHHHHHHHHH
T ss_pred HhccCCCE--EEec-CCCCCCCHHHHHHHHHcCCcEEEEChHHHHHHHHHHHH-HHHHHHHHccc-CCcccHHHHHHHHH
Confidence 66445622 4565 556666765555 56999999999988766555532 23332211111 12234666554444
Q ss_pred cccHHHHHHhhccccc
Q 012478 351 FNTYYEEEKRYATSMR 366 (462)
Q Consensus 351 ~~~~~~~e~~y~~~~~ 366 (462)
+++=...++.|..+..
T Consensus 328 ~~~p~~W~k~y~g~~~ 343 (450)
T 3txv_A 328 REEPANWAKYYHGSAE 343 (450)
T ss_dssp HHCTHHHHTTCCSSHH
T ss_pred HhCchhhhhhcCCCHH
Confidence 4433334455554443
No 140
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=95.69 E-value=1.9 Score=42.82 Aligned_cols=183 Identities=18% Similarity=0.176 Sum_probs=108.1
Q ss_pred ceEecccCChHHHHHHHHhCCcEEEecc-HHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEE-----eCCCCCCC
Q 012478 90 VHQGPACFDALSAKLVEKSGFSFCFTSG-FSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIG-----DGDNGYGN 163 (462)
Q Consensus 90 ~iv~p~ayDalSArl~e~aGfdaI~vSG-~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIa-----D~DtGyG~ 163 (462)
.+.=.+|.+.-+|..++++|++-|=+-+ +. -.|+.+--.++.. +.+.+++||.+ +.|+=|.+
T Consensus 40 ~~lEvc~~s~~~a~~A~~gGAdRIELc~~l~---------~GGlTPS~g~i~~---a~~~~~ipV~vMIRPRgGdF~Ys~ 107 (287)
T 3iwp_A 40 FLMEVCVDSVESAVNAERGGADRIELCSGLS---------EGGTTPSMGVLQV---VKQSVQIPVFVMIRPRGGDFLYSD 107 (287)
T ss_dssp SEEEEEESSHHHHHHHHHHTCSEEEECBCGG---------GTCBCCCHHHHHH---HHTTCCSCEEEECCSSSSCSCCCH
T ss_pred ceEEEEeCCHHHHHHHHHhCCCEEEECCCCC---------CCCCCCCHHHHHH---HHHhcCCCeEEEEecCCCCcccCH
Confidence 4445689999999999999999887653 22 1222222233333 34456788775 56666775
Q ss_pred H--HHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEec-chhhcccHH
Q 012478 164 A--MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVART-DSRQALSLE 240 (462)
Q Consensus 164 ~--~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiART-DA~~~~gld 240 (462)
. ....+-++.+.++||+||.+= ...+ -|+ ++.+-+. ...++... .++ ..=|- |.. .+..
T Consensus 108 ~E~~~M~~dI~~~~~~GAdGvVfG-~L~~--dg~------iD~~~~~----~Li~~a~~--l~v-TFHRAFD~~--~d~~ 169 (287)
T 3iwp_A 108 REIEVMKADIRLAKLYGADGLVFG-ALTE--DGH------IDKELCM----SLMAICRP--LPV-TFHRAFDMV--HDPM 169 (287)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEC-CBCT--TSC------BCHHHHH----HHHHHHTT--SCE-EECGGGGGC--SCHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEe-eeCC--CCC------cCHHHHH----HHHHHcCC--CcE-EEECchhcc--CCHH
Confidence 4 244466999999999999993 2111 122 3444333 33333321 222 23343 321 2346
Q ss_pred HHHHHHHHhHhcCCcEEEecCC-----CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHh-cCCCEEec
Q 012478 241 ESLRRSRAFADAGADVLFIDAL-----ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE-LGFKLVAY 309 (462)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~~-----~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~-lGv~~V~y 309 (462)
+|++....| |.|-|+..+- ...+.++++.+...+ -+.++.++|-++ -...+|.+ .|++-+-.
T Consensus 170 ~Ale~Li~l---GvdrILTSG~~~~a~~Gl~~Lk~Lv~~a~~---rI~ImaGGGV~~-~Ni~~l~~~tG~~~~H~ 237 (287)
T 3iwp_A 170 AALETLLTL---GFERVLTSGCDSSALEGLPLIKRLIEQAKG---RIVVMPGGGITD-RNLQRILEGSGATEFHC 237 (287)
T ss_dssp HHHHHHHHH---TCSEEEECTTSSSTTTTHHHHHHHHHHHTT---SSEEEECTTCCT-TTHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHc---CCCEEECCCCCCChHHhHHHHHHHHHHhCC---CCEEEECCCcCH-HHHHHHHHhhCCCEEeE
Confidence 677766555 9999998763 346777887775432 133556666554 36677655 88876644
No 141
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=95.64 E-value=0.083 Score=51.95 Aligned_cols=106 Identities=16% Similarity=0.189 Sum_probs=75.2
Q ss_pred HHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHH
Q 012478 169 RTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRA 248 (462)
Q Consensus 169 rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakA 248 (462)
-..+.++++|+.+|-+-|...--..||.+. ..++.+||+...++++++.. ..+|++=+.--.-.+.+++++-+..
T Consensus 28 ~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt-~~vtldemi~h~~aV~r~~~----~~~vvaD~pfgsy~~~~~a~~~a~r 102 (264)
T 1m3u_A 28 SFAKLFADEGLNVMLVGDSLGMTVQGHDST-LPVTVADIAYHTAAVRRGAP----NCLLLADLPFMAYATPEQAFENAAT 102 (264)
T ss_dssp HHHHHHHHHTCCEEEECTTHHHHTTCCSSS-TTCCHHHHHHHHHHHHHHCT----TSEEEEECCTTSSSSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECHHHHHHHcCCCCC-CCcCHHHHHHHHHHHHhhCC----CCcEEEECCCCCcCCHHHHHHHHHH
Confidence 345678889999999966543234577543 46899999999999887753 2344455543222278999999999
Q ss_pred hHhcCCcEEEecCCC-CHHHHHHHHHhCCCCcee
Q 012478 249 FADAGADVLFIDALA-SKEEMKAFCEISPLVPKM 281 (462)
Q Consensus 249 y~eAGAD~Ifie~~~-s~eei~~i~~~v~~vP~~ 281 (462)
+.++||++|-+|+-. -.+.++.+++. ++|++
T Consensus 103 l~kaGa~aVklEgg~e~~~~I~al~~a--gipV~ 134 (264)
T 1m3u_A 103 VMRAGANMVKIEGGEWLVETVQMLTER--AVPVC 134 (264)
T ss_dssp HHHTTCSEEECCCSGGGHHHHHHHHHT--TCCEE
T ss_pred HHHcCCCEEEECCcHHHHHHHHHHHHC--CCCeE
Confidence 999999999999852 34667777664 35655
No 142
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=95.63 E-value=0.17 Score=51.80 Aligned_cols=116 Identities=12% Similarity=0.099 Sum_probs=78.6
Q ss_pred CCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCc-ccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcc
Q 012478 159 NGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRK-VVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQAL 237 (462)
Q Consensus 159 tGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~-Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~ 237 (462)
.++.+++.+.+.++++.+.|..++||--.. ...||.+... .-+.++-+++|+|++++. |+++.|.. |+....
T Consensus 147 ~~~~~~e~~~~~a~~~~~~G~~~~KlK~g~--~~~~~~g~~~~~~~~~~d~~~v~avR~a~---G~d~~l~v--Dan~~~ 219 (404)
T 4e5t_A 147 NVYNDADMAAEAAAKAVDQGFTAVKFDPAG--AYTIYDGHQPSLEDLERSEAFCKQIRAAV---GTKADLLF--GTHGQF 219 (404)
T ss_dssp CTTTCHHHHHHHHHHHHHHTCSEEEECCSC--CCBTTCSBCCCHHHHHHHHHHHHHHHHHH---GGGSEEEE--CCCSCB
T ss_pred ccCCCHHHHHHHHHHHHHcCCCEEeeCCCC--CCcccccccccHHHHHHHHHHHHHHHHHc---CCCCeEEE--eCCCCc
Confidence 356678888899999999999999994221 1112211111 112566788888888775 45665543 676777
Q ss_pred cHHHHHHHHHHhHhcCCcEEEecCC-CCHHHHHHHHHhCCCCceee
Q 012478 238 SLEESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMA 282 (462)
Q Consensus 238 gldeAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~ 282 (462)
.+++|++-++++.+.|.+.|==+.. .+.+.++++.+.++ +|+..
T Consensus 220 ~~~~A~~~~~~l~~~~i~~iEeP~~~~~~~~~~~l~~~~~-iPIa~ 264 (404)
T 4e5t_A 220 TVSGAKRLARRLEAYDPLWFEEPIPPEKPEDMAEVARYTS-IPVAT 264 (404)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHCS-SCEEE
T ss_pred CHHHHHHHHHHHhhcCCcEEECCCCcccHHHHHHHHhhCC-CCEEe
Confidence 8999999999999998765432222 26788999998875 67654
No 143
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=95.60 E-value=0.14 Score=51.97 Aligned_cols=132 Identities=15% Similarity=0.224 Sum_probs=90.7
Q ss_pred CcEEEeCCCC-CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEE
Q 012478 151 IPVIGDGDNG-YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA 229 (462)
Q Consensus 151 iPVIaD~DtG-yG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiA 229 (462)
+|+-+-.- | .++++.+.+.++.+.+.|...+||- .|+ +.++-+++|++++++. |+++.|
T Consensus 139 v~~y~~~~-~~~~~~e~~~~~a~~~~~~G~~~iKiK-------vG~-------~~~~d~~~v~avR~a~---g~d~~l-- 198 (389)
T 3ozy_A 139 VRAYASSI-YWDLTPDQAADELAGWVEQGFTAAKLK-------VGR-------APRKDAANLRAMRQRV---GADVEI-- 198 (389)
T ss_dssp EEEEEEEE-CSSCCHHHHHHHHHHHHHTTCSEEEEE-------CCS-------CHHHHHHHHHHHHHHH---CTTSEE--
T ss_pred eeeEEecC-CCCCCHHHHHHHHHHHHHCCCCEEeec-------cCC-------CHHHHHHHHHHHHHHc---CCCceE--
Confidence 55544320 4 3568888999999999999999993 233 4677888999888774 567766
Q ss_pred ecchhhcccHHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHH-HhCCCCceeeeeeecCCCCCCCCHHHHH---hc
Q 012478 230 RTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFC-EISPLVPKMANMLEGGGKTPILNPLELE---EL 302 (462)
Q Consensus 230 RTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~-~~v~~vP~~~N~l~~~g~tP~ls~~eL~---~l 302 (462)
+.|+......++|++-++++.+.|.+.| |-+ .+.+.++++. +.++ +|+..+ +. ..+.+++. +.
T Consensus 199 ~vDan~~~~~~~A~~~~~~l~~~~i~~i--EqP~~~~d~~~~~~l~~~~~~-iPIa~d-----E~--i~~~~~~~~~i~~ 268 (389)
T 3ozy_A 199 LVDANQSLGRHDALAMLRILDEAGCYWF--EEPLSIDDIEGHRILRAQGTP-VRIATG-----EN--LYTRNAFNDYIRN 268 (389)
T ss_dssp EEECTTCCCHHHHHHHHHHHHHTTCSEE--ESCSCTTCHHHHHHHHTTCCS-SEEEEC-----TT--CCHHHHHHHHHHT
T ss_pred EEECCCCcCHHHHHHHHHHHHhcCCCEE--ECCCCcccHHHHHHHHhcCCC-CCEEeC-----CC--CCCHHHHHHHHHc
Confidence 3577777789999999999999987655 433 2677888888 7665 666533 21 23444443 33
Q ss_pred C-CCEEeccch
Q 012478 303 G-FKLVAYPLS 312 (462)
Q Consensus 303 G-v~~V~yp~~ 312 (462)
| ++.|..-..
T Consensus 269 ~~~d~v~ik~~ 279 (389)
T 3ozy_A 269 DAIDVLQADAS 279 (389)
T ss_dssp TCCSEECCCTT
T ss_pred CCCCEEEeCcc
Confidence 5 666666444
No 144
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=95.60 E-value=0.043 Score=53.57 Aligned_cols=83 Identities=7% Similarity=-0.042 Sum_probs=57.4
Q ss_pred HHHHHHHHhCCc-EEEec-cHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHh
Q 012478 100 LSAKLVEKSGFS-FCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKA 177 (462)
Q Consensus 100 lSArl~e~aGfd-aI~vS-G~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~A 177 (462)
-.|+.++++||| +|-+. |.-. . -|..+. .-+.+.+.+.++.|.+.+++||++=+-.++ +..++.+.++.++++
T Consensus 110 ~~a~~~~~~g~d~~iein~~~P~--~-~g~~~~-g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~~-~~~~~~~~a~~~~~~ 184 (311)
T 1jub_A 110 AMLKKIQESDFSGITELNLSCPN--V-PGEPQL-AYDFEATEKLLKEVFTFFTKPLGVKLPPYF-DLVHFDIMAEILNQF 184 (311)
T ss_dssp HHHHHHHHSCCCSEEEEESCCCC--S-SSCCCG-GGCHHHHHHHHHHHTTTCCSCEEEEECCCC-SHHHHHHHHHHHTTS
T ss_pred HHHHHHHhcCCCeEEEEeccCCC--C-CCcccc-cCCHHHHHHHHHHHHHhcCCCEEEEECCCC-CHHHHHHHHHHHHHc
Confidence 345677788999 88775 2111 1 122221 125666777788888888999999765544 556777888999999
Q ss_pred CccEEEeCCC
Q 012478 178 GFAGIILEDQ 187 (462)
Q Consensus 178 GaaGI~IEDq 187 (462)
|+++|.+-+.
T Consensus 185 G~d~i~v~~~ 194 (311)
T 1jub_A 185 PLTYVNSVNS 194 (311)
T ss_dssp CCCEEEECCC
T ss_pred CCcEEEecCC
Confidence 9999998764
No 145
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=95.60 E-value=0.11 Score=50.72 Aligned_cols=180 Identities=17% Similarity=0.173 Sum_probs=102.3
Q ss_pred CChH-HHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHH
Q 012478 97 FDAL-SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYI 175 (462)
Q Consensus 97 yDal-SArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~ 175 (462)
+|+. .|+..++.|+++|-+-- .++ -+.--++..+.|++.+++||+.- |++ =++.++ ....
T Consensus 72 ~~p~~~A~~y~~~GA~~isvlt---------d~~----~f~Gs~~~l~~ir~~v~lPvl~k-dfi-id~~qv----~~A~ 132 (272)
T 3qja_A 72 ADPAKLAQAYQDGGARIVSVVT---------EQR----RFQGSLDDLDAVRASVSIPVLRK-DFV-VQPYQI----HEAR 132 (272)
T ss_dssp -CHHHHHHHHHHTTCSEEEEEC---------CGG----GHHHHHHHHHHHHHHCSSCEEEE-SCC-CSHHHH----HHHH
T ss_pred CCHHHHHHHHHHcCCCEEEEec---------Chh----hcCCCHHHHHHHHHhCCCCEEEC-ccc-cCHHHH----HHHH
Confidence 3443 67888889999885431 000 01111235666777789999853 322 244334 4555
Q ss_pred HhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCc
Q 012478 176 KAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGAD 255 (462)
Q Consensus 176 ~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD 255 (462)
++||+||+|=+.. ++.+++.+-++ ..+++|.+.++-.. ..+| +++|. ++|||
T Consensus 133 ~~GAD~VlLi~a~-------------l~~~~l~~l~~----~a~~lGl~~lvev~-------t~ee-~~~A~---~~Gad 184 (272)
T 3qja_A 133 AHGADMLLLIVAA-------------LEQSVLVSMLD----RTESLGMTALVEVH-------TEQE-ADRAL---KAGAK 184 (272)
T ss_dssp HTTCSEEEEEGGG-------------SCHHHHHHHHH----HHHHTTCEEEEEES-------SHHH-HHHHH---HHTCS
T ss_pred HcCCCEEEEeccc-------------CCHHHHHHHHH----HHHHCCCcEEEEcC-------CHHH-HHHHH---HCCCC
Confidence 7999999994432 23343332233 23334555544332 3344 34443 67999
Q ss_pred EEEecCC------CCHHHHHHHHHhCC-CCceeeeeeecCCCC-CCCCHHHHHhcCCCEEeccchHHHHHHHHHHHHHHH
Q 012478 256 VLFIDAL------ASKEEMKAFCEISP-LVPKMANMLEGGGKT-PILNPLELEELGFKLVAYPLSLIGVSVRAMQDALTA 327 (462)
Q Consensus 256 ~Ifie~~------~s~eei~~i~~~v~-~vP~~~N~l~~~g~t-P~ls~~eL~~lGv~~V~yp~~ll~aa~~Am~~~l~~ 327 (462)
.|-+... .+.+.++++.+.+| .+|+. .++ |-. | -+..++.++|+.-|+.+..++++. -...+++.
T Consensus 185 ~IGv~~r~l~~~~~dl~~~~~l~~~v~~~~pvV---aeg-GI~t~-edv~~l~~~GadgvlVGsal~~a~--dp~~~~~~ 257 (272)
T 3qja_A 185 VIGVNARDLMTLDVDRDCFARIAPGLPSSVIRI---AES-GVRGT-ADLLAYAGAGADAVLVGEGLVTSG--DPRAAVAD 257 (272)
T ss_dssp EEEEESBCTTTCCBCTTHHHHHGGGSCTTSEEE---EES-CCCSH-HHHHHHHHTTCSEEEECHHHHTCS--CHHHHHHH
T ss_pred EEEECCCcccccccCHHHHHHHHHhCcccCEEE---EEC-CCCCH-HHHHHHHHcCCCEEEEcHHHhCCC--CHHHHHHH
Confidence 9988642 24567778877765 23432 343 422 2 135667889999999999887653 23445555
Q ss_pred HHc
Q 012478 328 IKG 330 (462)
Q Consensus 328 l~~ 330 (462)
|.+
T Consensus 258 l~~ 260 (272)
T 3qja_A 258 LVT 260 (272)
T ss_dssp HHT
T ss_pred HHh
Confidence 554
No 146
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=95.60 E-value=0.054 Score=53.33 Aligned_cols=139 Identities=19% Similarity=0.205 Sum_probs=98.1
Q ss_pred chHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHh-------hhccCCC---CCC-CCHHHHHHHHHH
Q 012478 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISA-------ARLALPD---TGF-ISYGEMVDQGQL 144 (462)
Q Consensus 76 ~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSa-------s~lG~PD---~g~-vsl~Eml~~~~~ 144 (462)
..-+.|++..++-+..++-.+||..++..+++. .+++.+++.-+-. +.+|.|= +|. .+++|+...+..
T Consensus 89 ~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~-vd~~kIgs~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~ei~~Ave~ 167 (276)
T 1vs1_A 89 EGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRY-ADMLQIGARNMQNFPLLREVGRSGKPVLLKRGFGNTVEELLAAAEY 167 (276)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHH-CSEEEECGGGTTCHHHHHHHHHHTCCEEEECCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHh-CCeEEECcccccCHHHHHHHHccCCeEEEcCCCCCCHHHHHHHHHH
Confidence 344567777777778888899999999999999 9999999765433 1346663 355 488999887776
Q ss_pred HHh----------------------------------hcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCC
Q 012478 145 ITQ----------------------------------AVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSP 190 (462)
Q Consensus 145 I~r----------------------------------a~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~P 190 (462)
|.. ..++||++|.+++-|...-+.......+.+||.|+.||--..|
T Consensus 168 i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~~lpVi~dssH~~g~~~~~~~~~~aAva~Ga~Gl~IE~H~~~ 247 (276)
T 1vs1_A 168 ILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEATHLPVIVDPSHPAGRRSLVPALAKAGLAAGADGLIVEVHPNP 247 (276)
T ss_dssp HHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHBSSCEEECCHHHHCSGGGHHHHHHHHHHTTCSEEEEEBCSSG
T ss_pred HHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHhCCCEEEeCCCCCCccchHHHHHHHHHHcCCCEEEEEecCCc
Confidence 632 2478999999998675332333333346689999999987655
Q ss_pred CCCCCCCCCcccCHHHHHHHHHHHHH
Q 012478 191 KGCGHTRGRKVVSREEAVMRIKAAVD 216 (462)
Q Consensus 191 KrCGH~~gk~Lvp~ee~~~kI~AA~~ 216 (462)
.+-- .+|+.-++++|+.+-++.++.
T Consensus 248 d~a~-~D~~~sl~p~~~~~lv~~i~~ 272 (276)
T 1vs1_A 248 EEAL-SDAKQQLTPGEFARLMGELRW 272 (276)
T ss_dssp GGCS-SCGGGCBCHHHHHHHHHHHHH
T ss_pred ccCC-CchhcCCCHHHHHHHHHHHHH
Confidence 3322 166777788888776666554
No 147
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=95.58 E-value=0.089 Score=53.18 Aligned_cols=139 Identities=18% Similarity=0.120 Sum_probs=81.6
Q ss_pred HHHHHHHHHhCccEEEeCCCC--------C---CCCCCCCCCCcccCH-HHHHHHHHHHHHHHHhhCCCeEEEEecchh-
Q 012478 168 KRTVKGYIKAGFAGIILEDQV--------S---PKGCGHTRGRKVVSR-EEAVMRIKAAVDARKESGSDIVIVARTDSR- 234 (462)
Q Consensus 168 ~rtVk~l~~AGaaGI~IEDq~--------~---PKrCGH~~gk~Lvp~-ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~- 234 (462)
.+.+++.++||++||.|-..- . .+|+..-+| .+-.. .-..+-|+|++++ .|+++.|.-|....
T Consensus 161 ~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGG-slenR~r~~~eiv~aVr~a---vg~d~pV~vRis~~~ 236 (363)
T 3l5l_A 161 VDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGG-SFDNRSRFLLETLAAVREV---WPENLPLTARFGVLE 236 (363)
T ss_dssp HHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHTT---SCTTSCEEEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCc-CHHHHHHHHHHHHHHHHHH---cCCCceEEEEecchh
Confidence 344566678999999997541 1 244433333 22111 1223344444433 36688777776442
Q ss_pred -h--c-ccHHHHHHHHHHhHhcCCcEEEecCC-------------CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHH
Q 012478 235 -Q--A-LSLEESLRRSRAFADAGADVLFIDAL-------------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPL 297 (462)
Q Consensus 235 -~--~-~gldeAI~RakAy~eAGAD~Ifie~~-------------~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~ 297 (462)
. . ..++++++-++.+.++|+|.|-+..- ...+.++++.+.+. +|++.| ++-+-.-..+
T Consensus 237 ~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~-iPVi~~----GgI~s~e~a~ 311 (363)
T 3l5l_A 237 YDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAK-LPVTSA----WGFGTPQLAE 311 (363)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHT-CCEEEC----SSTTSHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcC-CcEEEe----CCCCCHHHHH
Confidence 1 1 35789999999999999999876531 13455677777664 676543 2321011244
Q ss_pred HHHhcC-CCEEeccchHHH
Q 012478 298 ELEELG-FKLVAYPLSLIG 315 (462)
Q Consensus 298 eL~~lG-v~~V~yp~~ll~ 315 (462)
++-+.| +.+|.++-.++.
T Consensus 312 ~~l~~G~aD~V~iGR~~la 330 (363)
T 3l5l_A 312 AALQANQLDLVSVGRAHLA 330 (363)
T ss_dssp HHHHTTSCSEEECCHHHHH
T ss_pred HHHHCCCccEEEecHHHHh
Confidence 555667 899998876554
No 148
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=95.56 E-value=0.29 Score=49.71 Aligned_cols=123 Identities=19% Similarity=0.180 Sum_probs=86.6
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
++....+.++++.++|..+|+| ++||. +.++.+++|++++++. |+++.| +.|+.....++++
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKi-------k~g~~------~~~~d~e~v~avR~av---G~d~~l--~vDan~~~~~~~a 236 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKL-------KVGQP------NCAEDIRRLTAVREAL---GDEFPL--MVDANQQWDRETA 236 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEE-------ECCCS------CHHHHHHHHHHHHHHH---CSSSCE--EEECTTCSCHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEE-------ecCCC------CHHHHHHHHHHHHHHc---CCCCeE--EEECCCCCCHHHH
Confidence 6778888888999999999999 23441 3566788888887774 566655 4477777789999
Q ss_pred HHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHh---cC-CCEEeccchH
Q 012478 243 LRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE---LG-FKLVAYPLSL 313 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~---lG-v~~V~yp~~l 313 (462)
++-++++.+.|.+ |+|-+ .+.+.++++.+.++ +|+..+ +. ..+.+++++ .| ++.|..-..-
T Consensus 237 i~~~~~l~~~~i~--~iEqP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~~~d~v~ik~~~ 304 (398)
T 2pp0_A 237 IRMGRKMEQFNLI--WIEEPLDAYDIEGHAQLAAALD-TPIATG-----EM--LTSFREHEQLILGNASDFVQPDAPR 304 (398)
T ss_dssp HHHHHHHGGGTCS--CEECCSCTTCHHHHHHHHHHCS-SCEEEC-----TT--CCSHHHHHHHHHTTCCSEECCCHHH
T ss_pred HHHHHHHHHcCCc--eeeCCCChhhHHHHHHHHhhCC-CCEEec-----CC--cCCHHHHHHHHHcCCCCEEEeCccc
Confidence 9999999999887 45643 36788889988875 676533 21 235555544 45 7777664443
No 149
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=95.56 E-value=0.34 Score=49.10 Aligned_cols=123 Identities=15% Similarity=0.134 Sum_probs=86.8
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
++....+.++++.++|..+|+| ++||. +.++.+++|++++++. |+++.| +.|+.....++++
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKi-------k~g~~------~~~~~~e~v~avR~av---g~d~~l--~vDan~~~~~~~a 223 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKL-------KVGQP------DGALDIARVTAVRKHL---GDAVPL--MVDANQQWDRPTA 223 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEE-------ECCCS------CHHHHHHHHHHHHHHH---CTTSCE--EEECTTCCCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE-------ecCCC------CHHHHHHHHHHHHHHc---CCCCEE--EEECCCCCCHHHH
Confidence 6778888889999999999999 24542 3566788888888774 566655 3377677789999
Q ss_pred HHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHh---cC-CCEEeccchH
Q 012478 243 LRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE---LG-FKLVAYPLSL 313 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~---lG-v~~V~yp~~l 313 (462)
++-++++.+.|.+. +|-+ .+.+.++++.+.++ +|+..+ +. ..+.+++++ .| ++.|..-..-
T Consensus 224 ~~~~~~l~~~~i~~--iE~P~~~~~~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~~~d~v~ik~~~ 291 (393)
T 2og9_A 224 QRMCRIFEPFNLVW--IEEPLDAYDHEGHAALALQFD-TPIATG-----EM--LTSAAEHGDLIRHRAADYLMPDAPR 291 (393)
T ss_dssp HHHHHHHGGGCCSC--EECCSCTTCHHHHHHHHHHCS-SCEEEC-----TT--CCSHHHHHHHHHTTCCSEECCCHHH
T ss_pred HHHHHHHHhhCCCE--EECCCCcccHHHHHHHHHhCC-CCEEeC-----CC--cCCHHHHHHHHHCCCCCEEeeCccc
Confidence 99999999999874 4543 36788889988875 676532 22 235555444 45 7777664443
No 150
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=95.56 E-value=0.093 Score=51.88 Aligned_cols=106 Identities=16% Similarity=0.111 Sum_probs=77.8
Q ss_pred HHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHh
Q 012478 170 TVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAF 249 (462)
Q Consensus 170 tVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy 249 (462)
..+.++++|++.|..-|...--..||.+. ..++.+||+...++++.+. +..+|++=-+--.=.+.+++++-+..+
T Consensus 41 sA~l~e~aG~d~ilvGdSl~~~~lG~~dt-~~vtldem~~h~~aV~r~~----~~~~vvaD~pfgsY~s~~~a~~~a~rl 115 (275)
T 3vav_A 41 FAALLDRANVDVQLIGDSLGNVLQGQTTT-LPVTLDDIAYHTACVARAQ----PRALIVADLPFGTYGTPADAFASAVKL 115 (275)
T ss_dssp HHHHHHHTTCSEEEECTTHHHHTTCCSSS-TTCCHHHHHHHHHHHHHTC----CSSEEEEECCTTSCSSHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECcHHHHHHcCCCCC-CccCHHHHHHHHHHHHhcC----CCCCEEEecCCCCCCCHHHHHHHHHHH
Confidence 44678899999998777653334566543 3689999999999988764 246677666642115779999999999
Q ss_pred HhcCCcEEEecCC-CCHHHHHHHHHhCCCCceee
Q 012478 250 ADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMA 282 (462)
Q Consensus 250 ~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~ 282 (462)
.++||++|-+|+- .-.+.++++++. ++|++-
T Consensus 116 ~kaGa~aVklEdg~~~~~~i~~l~~~--GIpv~g 147 (275)
T 3vav_A 116 MRAGAQMVKFEGGEWLAETVRFLVER--AVPVCA 147 (275)
T ss_dssp HHTTCSEEEEECCGGGHHHHHHHHHT--TCCEEE
T ss_pred HHcCCCEEEECCchhHHHHHHHHHHC--CCCEEE
Confidence 9999999999974 335678888775 466664
No 151
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=95.54 E-value=0.11 Score=51.89 Aligned_cols=127 Identities=13% Similarity=0.165 Sum_probs=87.8
Q ss_pred CCCCHHHHHHHHHHHHH-hCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhccc
Q 012478 160 GYGNAMNVKRTVKGYIK-AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS 238 (462)
Q Consensus 160 GyG~~~nv~rtVk~l~~-AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~g 238 (462)
|.+++....+.++++.+ +|..+++| ++||. +.++.+++|++++++. |+++.| |-|+.....
T Consensus 139 ~~~~~e~~~~~a~~~~~~~Gf~~iKi-------k~g~~------~~~~~~e~v~avr~a~---g~~~~l--~vDan~~~~ 200 (370)
T 1nu5_A 139 ASGDTARDIDSALEMIETRRHNRFKV-------KLGAR------TPAQDLEHIRSIVKAV---GDRASV--RVDVNQGWD 200 (370)
T ss_dssp CSSCHHHHHHHHHHHHHTTSCSEEEE-------ECSSS------CHHHHHHHHHHHHHHH---GGGCEE--EEECTTCCC
T ss_pred cCCCHHHHHHHHHHHHHhCCccEEEE-------ecCCC------ChHHHHHHHHHHHHhc---CCCCEE--EEECCCCCC
Confidence 34577778888888888 99999998 24552 3466788888888774 345554 556766778
Q ss_pred HHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHH---HhcC-CCEEeccc
Q 012478 239 LEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLEL---EELG-FKLVAYPL 311 (462)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL---~~lG-v~~V~yp~ 311 (462)
.+++++-++++.+.|.+ |+|-+ .+.+.++++.+.++ +|+..+ +. ..+.+++ -+.| ++.|..-.
T Consensus 201 ~~~a~~~~~~l~~~~i~--~iEqP~~~~~~~~~~~l~~~~~-ipIa~d-----E~--~~~~~~~~~~i~~~~~d~v~ik~ 270 (370)
T 1nu5_A 201 EQTASIWIPRLEEAGVE--LVEQPVPRANFGALRRLTEQNG-VAILAD-----ES--LSSLSSAFELARDHAVDAFSLKL 270 (370)
T ss_dssp HHHHHHHHHHHHHHTCC--EEECCSCTTCHHHHHHHHHHCS-SEEEES-----TT--CCSHHHHHHHHHTTCCSEEEECH
T ss_pred HHHHHHHHHHHHhcCcc--eEeCCCCcccHHHHHHHHHhCC-CCEEeC-----CC--CCCHHHHHHHHHhCCCCEEEEch
Confidence 99999999999999877 45643 46788889988875 665533 21 2344444 3445 77777754
Q ss_pred hHH
Q 012478 312 SLI 314 (462)
Q Consensus 312 ~ll 314 (462)
.-.
T Consensus 271 ~~~ 273 (370)
T 1nu5_A 271 CNM 273 (370)
T ss_dssp HHH
T ss_pred hhc
Confidence 433
No 152
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=95.47 E-value=0.17 Score=51.41 Aligned_cols=146 Identities=15% Similarity=0.165 Sum_probs=87.7
Q ss_pred CCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHH
Q 012478 132 FISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRI 211 (462)
Q Consensus 132 ~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI 211 (462)
.++.++..+.++.+.....+|+.+-.-. .. .+.++.++++|++.|+|. .. .||. +.+.+.|
T Consensus 77 ~~s~e~~~~~I~~vk~~~~~pvga~ig~--~~----~e~a~~l~eaGad~I~ld-~a----~G~~--------~~~~~~i 137 (361)
T 3khj_A 77 NMDMESQVNEVLKVKNSGGLRVGAAIGV--NE----IERAKLLVEAGVDVIVLD-SA----HGHS--------LNIIRTL 137 (361)
T ss_dssp SSCHHHHHHHHHHHHHTTCCCCEEEECT--TC----HHHHHHHHHTTCSEEEEC-CS----CCSB--------HHHHHHH
T ss_pred CCCHHHHHHHHHHHHhccCceEEEEeCC--CH----HHHHHHHHHcCcCeEEEe-CC----CCCc--------HHHHHHH
Confidence 3678888888888887777888776522 22 566788899999999984 21 1321 3445555
Q ss_pred HHHHHHHHhhCCCeEEEE-ecchhhcccHHHHHHHHHHhHhcCCcEEEec---------------CCCCHHHHHHHH---
Q 012478 212 KAAVDARKESGSDIVIVA-RTDSRQALSLEESLRRSRAFADAGADVLFID---------------ALASKEEMKAFC--- 272 (462)
Q Consensus 212 ~AA~~Ar~~~g~d~vIiA-RTDA~~~~gldeAI~RakAy~eAGAD~Ifie---------------~~~s~eei~~i~--- 272 (462)
+.+++.. +..|++ -.. . .+.++.+.++|||.|.+- +.++.+.+.++.
T Consensus 138 ~~i~~~~-----~~~Vivg~v~-----t----~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~ 203 (361)
T 3khj_A 138 KEIKSKM-----NIDVIVGNVV-----T----EEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVA 203 (361)
T ss_dssp HHHHHHC-----CCEEEEEEEC-----S----HHHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHH
T ss_pred HHHHHhc-----CCcEEEccCC-----C----HHHHHHHHHcCcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHH
Confidence 5555442 333333 221 2 335788889999999981 123344444443
Q ss_pred HhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012478 273 EISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 273 ~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
+.+. +|+++ .||-.-.-+..++-++|...|..+..++.
T Consensus 204 ~~~~-iPVIA----~GGI~~~~di~kala~GAd~V~vGs~~~~ 241 (361)
T 3khj_A 204 SKFG-IPIIA----DGGIRYSGDIGKALAVGASSVMIGSILAG 241 (361)
T ss_dssp HHHT-CCEEE----ESCCCSHHHHHHHHHHTCSEEEESTTTTT
T ss_pred hhcC-CeEEE----ECCCCCHHHHHHHHHcCCCEEEEChhhhc
Confidence 3333 56543 33432112345566789999888765443
No 153
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=95.46 E-value=1.6 Score=43.76 Aligned_cols=214 Identities=17% Similarity=0.081 Sum_probs=134.5
Q ss_pred CchHHHHHHHHhCCCceEecccCChHHHHH----HHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcC
Q 012478 75 LSPAKSLRQILELPGVHQGPACFDALSAKL----VEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVS 150 (462)
Q Consensus 75 ~~~a~~LR~ll~~~~~iv~p~ayDalSArl----~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~ 150 (462)
+...+-|....+.+--+-+.|+++.-+++. +|+.+.+.|+-.+-+.. ...|. .++..++.+++..+
T Consensus 13 n~~~~ll~~A~~~~yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~-~y~g~---------~~~~~~~~~A~~~~ 82 (306)
T 3pm6_A 13 NRALPLLTFARTHSFAIPAICVYNLEGILAIIRAAEHKRSPAMILLFPWAI-QYADS---------LLVRTAASACRAAS 82 (306)
T ss_dssp CSSHHHHHHHHHTTCCEEEEECSSHHHHHHHHHHHHHTTCCEEEEECHHHH-HHHTT---------HHHHHHHHHHHHCS
T ss_pred cHHHHHHHHHHHCCcEEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhHH-hhccH---------HHHHHHHHHHHHCC
Confidence 344556666666666788899999888764 46678998886543322 22332 35566777778889
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHh--------CccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhC
Q 012478 151 IPVIGDGDNGYGNAMNVKRTVKGYIKA--------GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESG 222 (462)
Q Consensus 151 iPVIaD~DtGyG~~~nv~rtVk~l~~A--------GaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g 222 (462)
+||+.=.|.|. +. ..+++.+++ |...|.| |.. | .|.||=+++-+..++.....|
T Consensus 83 VPVaLHlDHg~-~~----e~i~~ai~~~~~~~~~~GFtSVMi-DgS------~------~p~eENi~~Tk~vv~~ah~~g 144 (306)
T 3pm6_A 83 VPITLHLDHAQ-DP----EIIKRAADLSRSETHEPGFDSIMV-DMS------H------FSKEENLRLTRELVAYCNARG 144 (306)
T ss_dssp SCEEEEEEEEC-CH----HHHHHHHHTC------CCCSEEEE-CCT------T------SCHHHHHHHHHHHHHHHHTTT
T ss_pred CCEEEEcCCCC-CH----HHHHHHHHhhhhccCCCCCCEEEE-eCC------C------CCHHHHHHHHHHHHHHHHHcC
Confidence 99999999984 33 345666677 9999999 542 2 367777777777776665322
Q ss_pred CCeEEE-------Eecchh--------hcccHHHHHHHHHHhHhcCCcEEEe-----cCC-------CCHHHHHHHHHhC
Q 012478 223 SDIVIV-------ARTDSR--------QALSLEESLRRSRAFADAGADVLFI-----DAL-------ASKEEMKAFCEIS 275 (462)
Q Consensus 223 ~d~vIi-------ARTDA~--------~~~gldeAI~RakAy~eAGAD~Ifi-----e~~-------~s~eei~~i~~~v 275 (462)
.-|= +--|.. .-...+| |+.|.+.|+|++-+ ++. -+.+.++++.+.+
T Consensus 145 --vsVEaElG~igG~Edgv~~~~~~~~~yT~Pee----a~~Fv~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v 218 (306)
T 3pm6_A 145 --IATEAEPGRIEGGEDGVQDTVDLEGVLTTPEE----SEEFVATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAV 218 (306)
T ss_dssp --CEEEECSSBCCCCBTTBCCCTTCCCBCCCHHH----HHHHHTTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHH
T ss_pred --CeEEEEeeeeccccCCccccccccccCCCHHH----HHHHHHcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHh
Confidence 1111 111110 0123444 55577899998753 222 1567888888877
Q ss_pred C-CCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHHHHHHHHHHHH
Q 012478 276 P-LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVSVRAMQDAL 325 (462)
Q Consensus 276 ~-~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~aa~~Am~~~l 325 (462)
+ .+|+ ++.|+...|.-.+.+.-++|+.-|-+...+..+...++++.+
T Consensus 219 ~~~vpL---VlHGgSG~p~e~i~~ai~~GV~KiNi~Tdl~~a~~~~~r~~~ 266 (306)
T 3pm6_A 219 GERVGL---VLHGADPFTKEIFEKCIERGVAKVNVNRAVNNEYVKVMREKA 266 (306)
T ss_dssp TTTSEE---EECSCTTCCHHHHHHHHHTTEEEEEESHHHHHHHHHHHHHHT
T ss_pred CCCCCE---EeeCCCCCCHHHHHHHHHcCCeEEEeChHHHHHHHHHHHHHh
Confidence 3 3554 345433333223344556799999999988888777776653
No 154
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=95.37 E-value=0.035 Score=55.47 Aligned_cols=140 Identities=16% Similarity=0.168 Sum_probs=93.3
Q ss_pred chHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHh-------hhccCCC---CCC-CCHHHHHHHHHH
Q 012478 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISA-------ARLALPD---TGF-ISYGEMVDQGQL 144 (462)
Q Consensus 76 ~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSa-------s~lG~PD---~g~-vsl~Eml~~~~~ 144 (462)
..-+.|++..++-+..++-.+||..++..+++. .|.+.+++..+-. +.+|.|= ++. .+++||...++.
T Consensus 99 ~GL~~L~~~~~e~GLpv~Tev~D~~~v~~l~~~-vd~lkIgA~~~~n~~LLr~va~~gkPVilK~Gms~t~~ei~~ave~ 177 (298)
T 3fs2_A 99 KALEVFSDLKKEYGFPVLTDIHTEEQCAAVAPV-VDVLQIPAFLCRQTDLLIAAARTGRVVNVKKGQFLAPWDMKNVLAK 177 (298)
T ss_dssp HHHHHHHHHHHHHCCCEEEECCSHHHHHHHTTT-CSEEEECGGGTTCHHHHHHHHHTTSEEEEECCTTCCGGGHHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhh-CCEEEECccccCCHHHHHHHHccCCcEEEeCCCCCCHHHHHHHHHH
Confidence 345567777777778888899999999999888 9999999843211 2356653 355 688999888776
Q ss_pred HHhh-------------------------------cCCcEEEeCCCC-----------CCCHHHHHHHHHHHHHhCccEE
Q 012478 145 ITQA-------------------------------VSIPVIGDGDNG-----------YGNAMNVKRTVKGYIKAGFAGI 182 (462)
Q Consensus 145 I~ra-------------------------------~~iPVIaD~DtG-----------yG~~~nv~rtVk~l~~AGaaGI 182 (462)
|... +++||++|.+.. -|...-+....+..+.+||+|+
T Consensus 178 i~~~Gn~~iiL~erg~~y~~~~~~vdl~~i~~lk~~~~PV~~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvAlGAdGl 257 (298)
T 3fs2_A 178 ITESGNPNVLATERGVSFGYNTLVSDMRALPIMAGLGAPVIFDATHSVQQPGGQGGSTGGQREFVETLARAAVAVGVAGF 257 (298)
T ss_dssp HHTTTCCCEEEEECCEECSSSCEECCTTHHHHHHTTTSCEEEEHHHHTCCCC--------CGGGHHHHHHHHHHHCCSEE
T ss_pred HHHcCCCeEEEEECCCCCCCCCCccCHHHHHHHHHcCCcEEEcCCCccccCCcccCCCCCchhhHHHHHHHHHHcCCCEE
Confidence 6421 468999997764 2333445566677778999999
Q ss_pred EeCCCCCCCCCCCCCCCcccCHH---HHHHHHHHHHHH
Q 012478 183 ILEDQVSPKGCGHTRGRKVVSRE---EAVMRIKAAVDA 217 (462)
Q Consensus 183 ~IEDq~~PKrCGH~~gk~Lvp~e---e~~~kI~AA~~A 217 (462)
.||=-..|.+-= .+++.-++++ ++++.|+++..+
T Consensus 258 ~IE~H~tpd~al-~D~~~sl~p~el~~lv~~ir~i~~a 294 (298)
T 3fs2_A 258 FIETHEDPDNAP-SDGPNMVPIDKMPALLEKLMAFDRI 294 (298)
T ss_dssp EEEEESSGGGCS-SSGGGCEEGGGHHHHHHHHHHHHHH
T ss_pred EEEecCChhccC-CchhhcCCHHHHHHHHHHHHHHHHH
Confidence 999765553211 1455444444 455555554443
No 155
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=95.32 E-value=0.053 Score=53.42 Aligned_cols=139 Identities=17% Similarity=0.147 Sum_probs=84.6
Q ss_pred hHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHh-------hhccCCC---CCC-CCHHHHHHHHHHH
Q 012478 77 PAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISA-------ARLALPD---TGF-ISYGEMVDQGQLI 145 (462)
Q Consensus 77 ~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSa-------s~lG~PD---~g~-vsl~Eml~~~~~I 145 (462)
.-+.|++..++-+..++-.+||..++..+++. .|++.+++..+-. +.+|.|= +|. .+++|+...+..|
T Consensus 74 gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~-~d~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~A~~~i 152 (280)
T 2qkf_A 74 GLKIFEKVKAEFGIPVITDVHEPHQCQPVAEV-CDVIQLPAFLARQTDLVVAMAKTGNVVNIKKPQFLSPSQMKNIVEKF 152 (280)
T ss_dssp HHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH-CSEEEECGGGTTBHHHHHHHHHTCCEEEEECCTTSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEecCCHHHHHHHHhh-CCEEEECcccccCHHHHHHHHcCCCcEEEECCCCCCHHHHHHHHHHH
Confidence 34567777666677788899999999999999 9999999844321 2345553 344 4888888877665
Q ss_pred Hh--------------------------------hc-CCcEEEeCCCC-----------CCCHHHHHHHHHHHHHhCccE
Q 012478 146 TQ--------------------------------AV-SIPVIGDGDNG-----------YGNAMNVKRTVKGYIKAGFAG 181 (462)
Q Consensus 146 ~r--------------------------------a~-~iPVIaD~DtG-----------yG~~~nv~rtVk~l~~AGaaG 181 (462)
.. .. ++||++|.+++ -|...-+....+..+.+||+|
T Consensus 153 ~~~Gn~~i~L~~rg~~~~~~~~~~dl~~i~~lk~~~~~~pV~~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aava~Ga~G 232 (280)
T 2qkf_A 153 HEAGNGKLILCERGSSFGYDNLVVDMLGFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQALDLALAGMATRLAG 232 (280)
T ss_dssp HHTTCCCEEEEECCEECSTTCEECCTTHHHHHHHHTTTCCEEEEHHHHCC----------CHHHHHHHHHHHHHTTCCSE
T ss_pred HHcCCCeEEEEECCCCCCCCccccCHHHHHHHHHhCCCCCEEEECCCCccccCccccccCCchhhHHHHHHHHHHcCCCE
Confidence 32 23 68999998887 343334455566667899999
Q ss_pred EEeCCCCCCCCCCCCCCCcccCHHH---HHHHHHHHHHH
Q 012478 182 IILEDQVSPKGCGHTRGRKVVSREE---AVMRIKAAVDA 217 (462)
Q Consensus 182 I~IEDq~~PKrCGH~~gk~Lvp~ee---~~~kI~AA~~A 217 (462)
+.||--..|.+-- .+|+.-++++| +++.|+++..+
T Consensus 233 ~~IE~H~~~d~al-~D~~~sl~p~~l~~lv~~i~~~~~~ 270 (280)
T 2qkf_A 233 LFLESHPDPKLAK-CDGPSALPLHLLEDFLIRIKALDDL 270 (280)
T ss_dssp EEEEC-----------------CCHHHHHHHHHHHHHHH
T ss_pred EEEeecCCcccCC-CccccCCCHHHHHHHHHHHHHHHHH
Confidence 9999765432211 14444444444 44444444444
No 156
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=95.31 E-value=0.25 Score=49.55 Aligned_cols=158 Identities=15% Similarity=0.039 Sum_probs=93.2
Q ss_pred HHHHHHHHhCCcEEEec---cHHHHhhh----ccCCCCCCCCHHH----HHHHHHHHHhhcCCcEEEeCCCC-C---C-C
Q 012478 100 LSAKLVEKSGFSFCFTS---GFSISAAR----LALPDTGFISYGE----MVDQGQLITQAVSIPVIGDGDNG-Y---G-N 163 (462)
Q Consensus 100 lSArl~e~aGfdaI~vS---G~avSas~----lG~PD~g~vsl~E----ml~~~~~I~ra~~iPVIaD~DtG-y---G-~ 163 (462)
-.|+.++++|||+|=+= |+-+.-.. .-..|.---+++. +++.++.|.++++.||.+-+--. | | +
T Consensus 148 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~ 227 (340)
T 3gr7_A 148 NGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLT 227 (340)
T ss_dssp HHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCC
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCC
Confidence 45788889999999876 33332111 1112321124543 35566777777789988755432 1 2 2
Q ss_pred HHHHHHHHHHHHHhCccEEEeCCCC-CCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 164 AMNVKRTVKGYIKAGFAGIILEDQV-SPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 164 ~~nv~rtVk~l~~AGaaGI~IEDq~-~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
..+..+.++.++++|++.|++-+.. .+.... .+ +-.. -+++.+|+.++ +..++.+++-..
T Consensus 228 ~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~--~~-~~~~-~~~~~~ik~~~------~iPVi~~GgI~s--------- 288 (340)
T 3gr7_A 228 AKDYVPYAKRMKEQGVDLVDVSSGAIVPARMN--VY-PGYQ-VPFAELIRREA------DIPTGAVGLITS--------- 288 (340)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEECCCSSCCCCC--CC-TTTT-HHHHHHHHHHT------TCCEEEESSCCC---------
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCccCCCCC--CC-cccc-HHHHHHHHHHc------CCcEEeeCCCCC---------
Confidence 4577888999999999999996532 111000 01 1011 23455554432 345666665422
Q ss_pred HHHHHHhHhcC-CcEEEec--CCCCHHHHHHHHHhCC
Q 012478 243 LRRSRAFADAG-ADVLFID--ALASKEEMKAFCEISP 276 (462)
Q Consensus 243 I~RakAy~eAG-AD~Ifie--~~~s~eei~~i~~~v~ 276 (462)
.+.+..+.++| ||+|.+- .+.+++..+++.+.++
T Consensus 289 ~e~a~~~L~~G~aD~V~iGR~~lanPdl~~ki~~~l~ 325 (340)
T 3gr7_A 289 GWQAEEILQNGRADLVFLGRELLRNPYWPYAAARELG 325 (340)
T ss_dssp HHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHTT
T ss_pred HHHHHHHHHCCCeeEEEecHHHHhCchHHHHHHHHCC
Confidence 23566777788 9999883 3456678888888764
No 157
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=95.30 E-value=0.04 Score=54.68 Aligned_cols=141 Identities=19% Similarity=0.191 Sum_probs=90.0
Q ss_pred chHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHH-------HhhhccCCC---CCC-CCHHHHHHHHHH
Q 012478 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSI-------SAARLALPD---TGF-ISYGEMVDQGQL 144 (462)
Q Consensus 76 ~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~av-------Sas~lG~PD---~g~-vsl~Eml~~~~~ 144 (462)
..-+.|++..++-+..++-.+||..++..+++ ..+++.++++.+ ..+.+|.|= +|. .+++|+...++.
T Consensus 76 ~gl~~l~~~~~~~Glp~~te~~d~~~~~~l~~-~vd~~kIgA~~~~n~~Ll~~~a~~~kPV~lk~G~~~t~~ei~~Av~~ 154 (292)
T 1o60_A 76 EGLKIFQELKDTFGVKIITDVHEIYQCQPVAD-VVDIIQLPAFLARQTDLVEAMAKTGAVINVKKPQFLSPSQMGNIVEK 154 (292)
T ss_dssp HHHHHHHHHHHHHCCEEEEECCSGGGHHHHHT-TCSEEEECGGGTTCHHHHHHHHHTTCEEEEECCTTSCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEecCCHHHHHHHHh-cCCEEEECcccccCHHHHHHHHcCCCcEEEeCCCCCCHHHHHHHHHH
Confidence 33456777766677888889999999999988 799999998332 222356553 344 488888887766
Q ss_pred HHh--------------------------------hc-CCcEEEeCCCC-----------CCCHHHHHHHHHHHHHhCcc
Q 012478 145 ITQ--------------------------------AV-SIPVIGDGDNG-----------YGNAMNVKRTVKGYIKAGFA 180 (462)
Q Consensus 145 I~r--------------------------------a~-~iPVIaD~DtG-----------yG~~~nv~rtVk~l~~AGaa 180 (462)
|.. .. ++||++|.+.+ -|...-+....+..+.+||.
T Consensus 155 i~~~Gn~~i~L~~rg~~~~y~~~~~dl~~i~~lk~~~~~~pV~~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAva~Ga~ 234 (292)
T 1o60_A 155 IEECGNDKIILCDRGTNFGYDNLIVDMLGFSVMKKASKGSPVIFDVTHSLQCRDPFGAASSGRRAQVTELARSGLAVGIA 234 (292)
T ss_dssp HHHTTCCCEEEEECCEECSTTCEECCTTHHHHHHHHTTSCCEEEEHHHHCC------------CTTHHHHHHHHHHHCCS
T ss_pred HHHcCCCeEEEEECCCCCCCCccccCHHHHHHHHhhCCCCCEEEECCCcccccCccccCCCCChhHHHHHHHHHHHcCCC
Confidence 532 23 68999999877 23211234445566679999
Q ss_pred EEEeCCCCCCCCCCCCCCCcccCHHH---HHHHHHHHHHHH
Q 012478 181 GIILEDQVSPKGCGHTRGRKVVSREE---AVMRIKAAVDAR 218 (462)
Q Consensus 181 GI~IEDq~~PKrCGH~~gk~Lvp~ee---~~~kI~AA~~Ar 218 (462)
|+.||--..|.+-= .+|+.-++++| +++.|+.+..+.
T Consensus 235 Gl~IE~H~~~d~al-~Dg~~sl~p~~l~~lv~~ir~i~~a~ 274 (292)
T 1o60_A 235 GLFLEAHPNPNQAK-CDGPSALPLSALEGFVSQMKAIDDLV 274 (292)
T ss_dssp EEEEEEESSGGGCS-SCCTTCEEGGGHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCcccCC-chhhcCCCHHHHHHHHHHHHHHHHHh
Confidence 99999765442211 14444444444 455555544443
No 158
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=95.24 E-value=0.35 Score=49.76 Aligned_cols=136 Identities=19% Similarity=0.256 Sum_probs=91.2
Q ss_pred CCcEEEeCCCCCC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEE
Q 012478 150 SIPVIGDGDNGYG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV 228 (462)
Q Consensus 150 ~iPVIaD~DtGyG-~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIi 228 (462)
.+|+..-.-.+++ ++....+.++++.++|..+|+|- +| + +.++-+++|++++++. |+++.|
T Consensus 184 ~vp~y~~~~g~~~~~~e~~~~~a~~~~~~Gf~~vKik-------~g---~----~~~~d~e~v~avR~a~---G~d~~l- 245 (441)
T 2hxt_A 184 GYPAYTTSPGWLGYSDEKLVRLAKEAVADGFRTIKLK-------VG---A----NVQDDIRRCRLARAAI---GPDIAM- 245 (441)
T ss_dssp CEEEEEEEEECTTSCHHHHHHHHHHHHHTTCSEEEEE-------CC---S----CHHHHHHHHHHHHHHH---CSSSEE-
T ss_pred CcceeEecccccCCCHHHHHHHHHHHHHcCCCEEEEc-------cC---C----CHHHHHHHHHHHHHhc---CCCCeE-
Confidence 4665443211223 57778888889999999999982 22 1 3567788888888774 677766
Q ss_pred EecchhhcccHHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHh---c
Q 012478 229 ARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE---L 302 (462)
Q Consensus 229 ARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~---l 302 (462)
+-|+.....++++++-++++.+.|.+ |+|-+ .+.+.++++.+.+..+|+..+ +. ..+.+++.+ .
T Consensus 246 -~vDan~~~~~~~a~~~~~~l~~~~i~--~iEqP~~~~d~~~~~~l~~~~~~iPIa~d-----E~--~~~~~~~~~~i~~ 315 (441)
T 2hxt_A 246 -AVDANQRWDVGPAIDWMRQLAEFDIA--WIEEPTSPDDVLGHAAIRQGITPVPVSTG-----EH--TQNRVVFKQLLQA 315 (441)
T ss_dssp -EEECTTCCCHHHHHHHHHTTGGGCCS--CEECCSCTTCHHHHHHHHHHHTTSCEEEC-----TT--CCSHHHHHHHHHH
T ss_pred -EEECCCCCCHHHHHHHHHHHHhcCCC--eeeCCCCHHHHHHHHHHHhhCCCCCEEEe-----CC--cCCHHHHHHHHHc
Confidence 45777777899999999999999887 55653 356788888887633666532 21 235555543 4
Q ss_pred C-CCEEeccchH
Q 012478 303 G-FKLVAYPLSL 313 (462)
Q Consensus 303 G-v~~V~yp~~l 313 (462)
| ++.|..-..-
T Consensus 316 ~~~d~v~ik~~~ 327 (441)
T 2hxt_A 316 GAVDLIQIDAAR 327 (441)
T ss_dssp TCCSEECCCTTT
T ss_pred CCCCEEEeCcce
Confidence 4 7777664443
No 159
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=95.19 E-value=0.2 Score=46.05 Aligned_cols=86 Identities=17% Similarity=0.115 Sum_probs=58.4
Q ss_pred CCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHH
Q 012478 88 PGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNV 167 (462)
Q Consensus 88 ~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv 167 (462)
++..+++++++...++.++++|++.|.++..+... +.++.. +...-++.++.+.+.+++||+++. |..+..++
T Consensus 118 ~~~~v~~~~~t~~e~~~~~~~G~d~i~~~~~g~t~---~~~~~~--~~~~~~~~~~~~~~~~~ipvia~G--GI~~~~~~ 190 (223)
T 1y0e_A 118 PNVEIMADIATVEEAKNAARLGFDYIGTTLHGYTS---YTQGQL--LYQNDFQFLKDVLQSVDAKVIAEG--NVITPDMY 190 (223)
T ss_dssp TTSEEEEECSSHHHHHHHHHTTCSEEECTTTTSST---TSTTCC--TTHHHHHHHHHHHHHCCSEEEEES--SCCSHHHH
T ss_pred CCceEEecCCCHHHHHHHHHcCCCEEEeCCCcCcC---CCCCCC--CCcccHHHHHHHHhhCCCCEEEec--CCCCHHHH
Confidence 36777889999999999999999998765322110 111211 123345677788888899999984 34455444
Q ss_pred HHHHHHHHHhCccEEEe
Q 012478 168 KRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 168 ~rtVk~l~~AGaaGI~I 184 (462)
+++.++||++|.+
T Consensus 191 ----~~~~~~Gad~v~v 203 (223)
T 1y0e_A 191 ----KRVMDLGVHCSVV 203 (223)
T ss_dssp ----HHHHHTTCSEEEE
T ss_pred ----HHHHHcCCCEEEE
Confidence 4566789999988
No 160
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=95.18 E-value=0.67 Score=47.01 Aligned_cols=105 Identities=12% Similarity=0.061 Sum_probs=68.2
Q ss_pred HHHHHhHhcCCcEEEecC---------CCCHHHHHHHHHhCC-CCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchH
Q 012478 244 RRSRAFADAGADVLFIDA---------LASKEEMKAFCEISP-LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSL 313 (462)
Q Consensus 244 ~RakAy~eAGAD~Ifie~---------~~s~eei~~i~~~v~-~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~l 313 (462)
+.++...++|||+|.+.+ +.+.+.+.++.+.++ .+|++++ ||-.-..+....-++|.+.|..+..+
T Consensus 241 e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~----GGI~~g~D~~kalalGAd~V~iGr~~ 316 (368)
T 2nli_A 241 EDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFD----SGVRRGEHVAKALASGADVVALGRPV 316 (368)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEEC----SSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred HHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEE----CCCCCHHHHHHHHHcCCCEEEECHHH
Confidence 457888999999999932 345677888887764 3666543 34322234455556999999999887
Q ss_pred HHHH----HHHHHHHHHHHHcCCCCCCCCCCCHHHHHHhcCcccHHHHHHhhc
Q 012478 314 IGVS----VRAMQDALTAIKGGRIPSPGSMPSFQEIKETLGFNTYYEEEKRYA 362 (462)
Q Consensus 314 l~aa----~~Am~~~l~~l~~g~~~~~~~~~s~~e~~~lvg~~~~~~~e~~y~ 362 (462)
+.+. ..++.+.++.|++. ++....+.|.....++.+...
T Consensus 317 l~~~~~~G~~gv~~~l~~l~~e----------l~~~m~~~G~~~i~~l~~~~l 359 (368)
T 2nli_A 317 LFGLALGGWQGAYSVLDYFQKD----------LTRVMQLTGSQNVEDLKGLDL 359 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHTCSSHHHHHTCCE
T ss_pred HHHHHhcChHHHHHHHHHHHHH----------HHHHHHHhCCcCHHHhccccE
Confidence 7763 23444555555543 456666777777777665544
No 161
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=95.18 E-value=0.23 Score=48.04 Aligned_cols=184 Identities=17% Similarity=0.173 Sum_probs=97.0
Q ss_pred eEecccCCh--HHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHH
Q 012478 91 HQGPACFDA--LSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVK 168 (462)
Q Consensus 91 iv~p~ayDa--lSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~ 168 (462)
++..+-|.- .+.+.++++|.|++-++- - . -|....+++.+++.++. ...+++... .||.+....+
T Consensus 16 ~~~t~g~p~~~~~~~~l~~~Gad~ielg~-p----r---~~~~g~~~~~~~~~l~~----~~~~~~pn~-~~~~~~~~~~ 82 (264)
T 1xm3_A 16 LLGTGKYPSFDIQKEAVAVSESDILTFAV-R----R---MNIFEASQPNFLEQLDL----SKYTLLPNT-AGASTAEEAV 82 (264)
T ss_dssp EEECSCSSCHHHHHHHHHHHTCSEEEEET-T----S---STTC-------CTTCCG----GGSEEEEEC-TTCSSHHHHH
T ss_pred EEEecCCCCHHHHHHHHHHcCCeEEEEcc-c----c---cccCCCCHHHHHHHHHh----cCCeEcCCc-cccCCHHHHH
Confidence 444444422 345677888999997662 1 1 12112445555554432 346666555 3677777777
Q ss_pred HHHHHHHHhCccE-EEeCCCCCCCCCCCCCCCc-ccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHH
Q 012478 169 RTVKGYIKAGFAG-IILEDQVSPKGCGHTRGRK-VVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRS 246 (462)
Q Consensus 169 rtVk~l~~AGaaG-I~IEDq~~PKrCGH~~gk~-Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~Ra 246 (462)
+.++.+.++|.++ |++|--. .... +-..++.+ +++++.. ++++.++.-+- .. .+|+
T Consensus 83 ~f~~~a~~agg~~~i~l~i~~--------d~~~~~~e~~~~~---~~a~~~~---~~g~~vi~~~~----~~----~~~a 140 (264)
T 1xm3_A 83 RIARLAKASGLCDMIKVEVIG--------CSRSLLPDPVETL---KASEQLL---EEGFIVLPYTS----DD----VVLA 140 (264)
T ss_dssp HHHHHHHHTTCCSSEEECCBC--------CTTTCCBCHHHHH---HHHHHHH---HTTCCEEEEEC----SC----HHHH
T ss_pred HHHHHHHHcCCCCeEEEeecC--------CCcccccchHHHH---HHHHHHH---CCCeEEEEEcC----CC----HHHH
Confidence 7778888876554 4443211 1011 11223333 3333332 23444432211 01 2368
Q ss_pred HHhHhcCCcEEEecC--------CCCHHHHHHHHHhCCCCceeeeeeecCCC-CCCCCHHHHHhcCCCEEeccchHHH
Q 012478 247 RAFADAGADVLFIDA--------LASKEEMKAFCEISPLVPKMANMLEGGGK-TPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 247 kAy~eAGAD~Ifie~--------~~s~eei~~i~~~v~~vP~~~N~l~~~g~-tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
++..++|+|.|+.-+ +.+.+.++++.+.. .+|+. +.+ |- +| -+..++.++|++-|+.+..++.
T Consensus 141 ~~~~~~gad~v~~~~~~~Gt~~~~~~~~~l~~i~~~~-~iPvi---v~g-GI~t~-eda~~~~~~GAdgViVGSAi~~ 212 (264)
T 1xm3_A 141 RKLEELGVHAIMPGASPIGSGQGILNPLNLSFIIEQA-KVPVI---VDA-GIGSP-KDAAYAMELGADGVLLNTAVSG 212 (264)
T ss_dssp HHHHHHTCSCBEECSSSTTCCCCCSCHHHHHHHHHHC-SSCBE---EES-CCCSH-HHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHhCCCEEEECCcccCCCCCCCCHHHHHHHHhcC-CCCEE---EEe-CCCCH-HHHHHHHHcCCCEEEEcHHHhC
Confidence 888899999985511 23467777777754 35654 233 42 22 2457778899999999998764
No 162
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=95.16 E-value=0.67 Score=46.62 Aligned_cols=127 Identities=15% Similarity=0.140 Sum_probs=88.6
Q ss_pred CCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHH
Q 012478 162 GNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEE 241 (462)
Q Consensus 162 G~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~glde 241 (462)
+++....+.++++.++|..+|+|- +|. +.+..+++|++++++. | ++.| |.|+.....+++
T Consensus 146 ~~~e~~~~~a~~~~~~Gf~~iKik-------~g~-------~~~~~~e~v~avr~a~---g-d~~l--~vD~n~~~~~~~ 205 (384)
T 2pgw_A 146 ETAEELARDAAVGHAQGERVFYLK-------VGR-------GEKLDLEITAAVRGEI---G-DARL--RLDANEGWSVHD 205 (384)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEE-------CCS-------CHHHHHHHHHHHHTTS---T-TCEE--EEECTTCCCHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEC-------cCC-------CHHHHHHHHHHHHHHc---C-CcEE--EEecCCCCCHHH
Confidence 467778888899999999999992 232 4567788888887763 4 6654 458877778999
Q ss_pred HHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHH---hcC-CCEEeccchHH
Q 012478 242 SLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE---ELG-FKLVAYPLSLI 314 (462)
Q Consensus 242 AI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~---~lG-v~~V~yp~~ll 314 (462)
+++-++++.+.|.+.| |-+ .+.+.++++.+.++ +|+..+ +. ..+.+++. +.| ++.|..-..-.
T Consensus 206 a~~~~~~l~~~~i~~i--EqP~~~~~~~~~~~l~~~~~-iPI~~d-----e~--i~~~~~~~~~i~~~~~d~v~ik~~~~ 275 (384)
T 2pgw_A 206 AINMCRKLEKYDIEFI--EQPTVSWSIPAMAHVREKVG-IPIVAD-----QA--AFTLYDVYEICRQRAADMICIGPREI 275 (384)
T ss_dssp HHHHHHHHGGGCCSEE--ECCSCTTCHHHHHHHHHHCS-SCEEES-----TT--CCSHHHHHHHHHTTCCSEEEECHHHH
T ss_pred HHHHHHHHHhcCCCEE--eCCCChhhHHHHHHHHhhCC-CCEEEe-----CC--cCCHHHHHHHHHcCCCCEEEEcchhh
Confidence 9999999999998854 433 36788889988875 676543 22 23554444 344 78887755544
Q ss_pred HHHH
Q 012478 315 GVSV 318 (462)
Q Consensus 315 ~aa~ 318 (462)
.-..
T Consensus 276 GGit 279 (384)
T 2pgw_A 276 GGIQ 279 (384)
T ss_dssp TSHH
T ss_pred CCHH
Confidence 3333
No 163
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=95.10 E-value=0.73 Score=47.36 Aligned_cols=146 Identities=16% Similarity=0.181 Sum_probs=94.6
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCC--CCcccCHHHHHHHHHHHHHHHHhhCCCeEE
Q 012478 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTR--GRKVVSREEAVMRIKAAVDARKESGSDIVI 227 (462)
Q Consensus 150 ~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~--gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vI 227 (462)
.+|+-+-. .+.++++...+.++++.+.|..+++|- +||.. |. -..++-+++|+|++++. |+++.|
T Consensus 167 ~v~~y~s~-~~~~~~e~~~~~a~~~~~~Gf~~iKik-------~g~gp~dg~--~~~~~die~v~avReav---G~d~~L 233 (412)
T 3stp_A 167 RIPVYYSK-LYAGSIEAMQKEAEEAMKGGYKAFKSR-------FGYGPKDGM--PGMRENLKRVEAVREVI---GYDNDL 233 (412)
T ss_dssp SEEEEEEC-CCSCCHHHHHHHHHHHHTTTCSEEEEE-------CCCCGGGHH--HHHHHHHHHHHHHHHHH---CSSSEE
T ss_pred eEEEEEEe-cCCCCHHHHHHHHHHHHHcCCCEEEEe-------cccCccccc--chHHHHHHHHHHHHHHc---CCCCeE
Confidence 36766532 112467888888999999999999993 34421 10 12356778888887774 667766
Q ss_pred EEecchhhcccHHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHH---HHHh
Q 012478 228 VARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPL---ELEE 301 (462)
Q Consensus 228 iARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~---eL~~ 301 (462)
.. |+.....+++|++-++++.+.|.+.| |-+ .+.+.++++.+.++ +|+..+ +. ..+.. ++-+
T Consensus 234 ~v--DaN~~~~~~~Ai~~~~~Le~~~i~~i--EeP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~li~ 301 (412)
T 3stp_A 234 ML--ECYMGWNLDYAKRMLPKLAPYEPRWL--EEPVIADDVAGYAELNAMNI-VPISGG-----EH--EFSVIGCAELIN 301 (412)
T ss_dssp EE--ECTTCSCHHHHHHHHHHHGGGCCSEE--ECCSCTTCHHHHHHHHHTCS-SCEEEC-----TT--CCSHHHHHHHHH
T ss_pred EE--ECCCCCCHHHHHHHHHHHHhcCCCEE--ECCCCcccHHHHHHHHhCCC-CCEEeC-----CC--CCCHHHHHHHHH
Confidence 54 67777789999999999999987754 433 26788889988765 676533 21 23444 4455
Q ss_pred cC-CCEEeccchHHHHHHHH
Q 012478 302 LG-FKLVAYPLSLIGVSVRA 320 (462)
Q Consensus 302 lG-v~~V~yp~~ll~aa~~A 320 (462)
.| +..|..-..-..-...+
T Consensus 302 ~~a~D~v~ik~~~~GGit~a 321 (412)
T 3stp_A 302 RKAVSVLQYDTNRVGGITAA 321 (412)
T ss_dssp TTCCSEECCCHHHHTHHHHH
T ss_pred cCCCCEEecChhhcCCHHHH
Confidence 56 66666644444333333
No 164
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=95.09 E-value=0.3 Score=49.42 Aligned_cols=123 Identities=9% Similarity=0.073 Sum_probs=85.1
Q ss_pred CCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHH
Q 012478 162 GNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEE 241 (462)
Q Consensus 162 G~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~glde 241 (462)
+++....+.++++.++|..+|+|- +||. +.++.+++|++++++. |+++.|. .|+.....+++
T Consensus 148 ~~~~~~~~~a~~~~~~Gf~~vKik-------~g~~------~~~~~~e~v~avR~a~---G~d~~l~--vDan~~~~~~~ 209 (391)
T 2qgy_A 148 KDTNDYLRQIEKFYGKKYGGIKIY-------PMLD------SLSISIQFVEKVREIV---GDELPLM--LDLAVPEDLDQ 209 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSCEEEC-------CCCS------SHHHHHHHHHHHHHHH---CSSSCEE--EECCCCSCHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEc-------cCCC------hHHHHHHHHHHHHHHh---CCCCEEE--EEcCCCCCHHH
Confidence 357788888899999999999982 3431 1467788888888764 5666554 36666678899
Q ss_pred HHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHH---HHhcC-CCEEeccch
Q 012478 242 SLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELG-FKLVAYPLS 312 (462)
Q Consensus 242 AI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~e---L~~lG-v~~V~yp~~ 312 (462)
+++-++++.+.|.+. +|-+ .+.+.++++.+.++ +|+..+ +. ..+.++ +-+.| ++.|..-..
T Consensus 210 a~~~~~~l~~~~i~~--iEqP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~~~d~v~ik~~ 277 (391)
T 2qgy_A 210 TKSFLKEVSSFNPYW--IEEPVDGENISLLTEIKNTFN-MKVVTG-----EK--QSGLVHFRELISRNAADIFNPDIS 277 (391)
T ss_dssp HHHHHHHHGGGCCSE--EECSSCTTCHHHHHHHHHHCS-SCEEEC-----TT--CCSHHHHHHHHHTTCCSEECCBTT
T ss_pred HHHHHHHHHhcCCCe--EeCCCChhhHHHHHHHHhhCC-CCEEEc-----CC--cCCHHHHHHHHHcCCCCEEEECcc
Confidence 999999999999885 4543 36778889988875 676533 21 224444 33445 677766443
No 165
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=95.06 E-value=0.68 Score=46.09 Aligned_cols=132 Identities=14% Similarity=0.114 Sum_probs=81.0
Q ss_pred cCCcEEEeCCCCCCCHHHHHHHHHHHHHhC--ccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeE
Q 012478 149 VSIPVIGDGDNGYGNAMNVKRTVKGYIKAG--FAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIV 226 (462)
Q Consensus 149 ~~iPVIaD~DtGyG~~~nv~rtVk~l~~AG--aaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~v 226 (462)
.+.|+.+|. |+ ..+..+.++.+.++| +..|.|.- . +|+ .....+.|++++++. ++.+
T Consensus 93 ~g~~v~v~~--g~--~~~~~~~a~~~~~~g~~~~~i~i~~-~----~G~--------~~~~~~~i~~lr~~~----~~~~ 151 (336)
T 1ypf_A 93 RGLIASISV--GV--KEDEYEFVQQLAAEHLTPEYITIDI-A----HGH--------SNAVINMIQHIKKHL----PESF 151 (336)
T ss_dssp TTCCCEEEE--CC--SHHHHHHHHHHHHTTCCCSEEEEEC-S----SCC--------SHHHHHHHHHHHHHC----TTSE
T ss_pred cCCeEEEeC--CC--CHHHHHHHHHHHhcCCCCCEEEEEC-C----CCC--------cHHHHHHHHHHHHhC----CCCE
Confidence 467999993 43 234456678889999 99987732 1 121 123345555555543 2334
Q ss_pred EEEecchhhcccHHHHHHHHHHhHhcCCcEEEec--C-------------CC--CHHHHHHHHHhCCCCceeeeeeecCC
Q 012478 227 IVARTDSRQALSLEESLRRSRAFADAGADVLFID--A-------------LA--SKEEMKAFCEISPLVPKMANMLEGGG 289 (462)
Q Consensus 227 IiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie--~-------------~~--s~eei~~i~~~v~~vP~~~N~l~~~g 289 (462)
|+.-+ ... .+.|++++++|||.|.+- + .+ +.+.+.++++.+. +|++++ ||
T Consensus 152 vi~G~----v~s----~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~~-ipVIa~----GG 218 (336)
T 1ypf_A 152 VIAGN----VGT----PEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAAS-KPIIAD----GG 218 (336)
T ss_dssp EEEEE----ECS----HHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTCS-SCEEEE----SC
T ss_pred EEECC----cCC----HHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHcC-CcEEEe----CC
Confidence 44221 111 346888999999999992 1 11 4567777777763 676543 34
Q ss_pred CCCCCCHHHHHhcCCCEEeccchHH
Q 012478 290 KTPILNPLELEELGFKLVAYPLSLI 314 (462)
Q Consensus 290 ~tP~ls~~eL~~lGv~~V~yp~~ll 314 (462)
-.-.-+..+.-++|.+.|..+..++
T Consensus 219 I~~g~Dv~kalalGAdaV~iGr~~l 243 (336)
T 1ypf_A 219 IRTNGDVAKSIRFGATMVMIGSLFA 243 (336)
T ss_dssp CCSTHHHHHHHHTTCSEEEESGGGT
T ss_pred CCCHHHHHHHHHcCCCEEEeChhhh
Confidence 3323455666679999999998877
No 166
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=95.05 E-value=0.13 Score=52.35 Aligned_cols=126 Identities=13% Similarity=0.153 Sum_probs=88.5
Q ss_pred CCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHH
Q 012478 162 GNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEE 241 (462)
Q Consensus 162 G~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~glde 241 (462)
++++.+.+.++++.+.|...+||- +|+ +.++-+++|+|++++. |+++.|.- .|+......++
T Consensus 141 ~~~e~~~~~a~~~~~~G~~~~KiK-------vG~-------~~~~d~~~v~avR~a~---g~~~~l~~-vDan~~~~~~~ 202 (391)
T 3gd6_A 141 EEVESNLDVVRQKLEQGFDVFRLY-------VGK-------NLDADEEFLSRVKEEF---GSRVRIKS-YDFSHLLNWKD 202 (391)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEE-------CSS-------CHHHHHHHHHHHHHHH---GGGCEEEE-EECTTCSCHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEe-------eCC-------CHHHHHHHHHHHHHHc---CCCCcEEE-ecCCCCcCHHH
Confidence 356788888899999999999992 343 3567788999988775 45554431 47777788999
Q ss_pred HHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHH---HHhcC-CCEEeccchHH
Q 012478 242 SLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELG-FKLVAYPLSLI 314 (462)
Q Consensus 242 AI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~e---L~~lG-v~~V~yp~~ll 314 (462)
|++-++++.+.|.++.|+|-+ .+.+.++++.+.++ +|+ + |. ..+.++ +-+.| ++.|..-..-.
T Consensus 203 A~~~~~~l~~~~i~~~~iEqP~~~~d~~~~~~l~~~~~-iPI--d--E~-----~~~~~~~~~~~~~~~~d~v~~k~~~~ 272 (391)
T 3gd6_A 203 AHRAIKRLTKYDLGLEMIESPAPRNDFDGLYQLRLKTD-YPI--S--EH-----VWSFKQQQEMIKKDAIDIFNISPVFI 272 (391)
T ss_dssp HHHHHHHHTTCCSSCCEEECCSCTTCHHHHHHHHHHCS-SCE--E--EE-----CCCHHHHHHHHHHTCCSEEEECHHHH
T ss_pred HHHHHHHHHhcCCCcceecCCCChhhHHHHHHHHHHcC-CCc--C--CC-----CCCHHHHHHHHHcCCCCEEEECchhc
Confidence 999999999999866777764 26788889988875 565 2 21 234544 44445 67776655443
Q ss_pred H
Q 012478 315 G 315 (462)
Q Consensus 315 ~ 315 (462)
.
T Consensus 273 G 273 (391)
T 3gd6_A 273 G 273 (391)
T ss_dssp T
T ss_pred C
Confidence 3
No 167
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=94.99 E-value=0.13 Score=51.95 Aligned_cols=99 Identities=13% Similarity=0.143 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhccc-HHHHH
Q 012478 165 MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS-LEESL 243 (462)
Q Consensus 165 ~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~g-ldeAI 243 (462)
+.+.+.++++.+.|..+++|- .||.++ +.++-+++|+|++++. |+++.|.. |+..... +++|+
T Consensus 148 e~~~~~a~~~~~~Gf~~iKlk-------~g~~g~----~~~~d~~~v~avR~a~---g~~~~l~v--Dan~~~~d~~~A~ 211 (374)
T 3sjn_A 148 EDNVAIVQGLKDQGFSSIKFG-------GGVMGD----DPDTDYAIVKAVREAA---GPEMEVQI--DLASKWHTCGHSA 211 (374)
T ss_dssp GGGHHHHHHHHTTTCSEEEEE-------CTTTTS----CHHHHHHHHHHHHHHH---CSSSEEEE--ECTTTTCSHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEec-------cCCCCC----CHHHHHHHHHHHHHHh---CCCCeEEE--ECCCCCCCHHHHH
Confidence 778888889999999999992 455432 3577788999888774 56776654 6767777 99999
Q ss_pred HHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceee
Q 012478 244 RRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMA 282 (462)
Q Consensus 244 ~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~ 282 (462)
+-++++.+.|.+.| |-+ .+.+.++++.+.++ +|+..
T Consensus 212 ~~~~~l~~~~i~~i--EqP~~~~~~~~~~~l~~~~~-iPIa~ 250 (374)
T 3sjn_A 212 MMAKRLEEFNLNWI--EEPVLADSLISYEKLSRQVS-QKIAG 250 (374)
T ss_dssp HHHHHSGGGCCSEE--ECSSCTTCHHHHHHHHHHCS-SEEEE
T ss_pred HHHHHhhhcCceEE--ECCCCcccHHHHHHHHhhCC-CCEEe
Confidence 99999999987654 543 26788899988875 67654
No 168
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=94.97 E-value=0.71 Score=48.01 Aligned_cols=168 Identities=14% Similarity=0.075 Sum_probs=95.3
Q ss_pred CHHHHHHHHHHHHhh-------cCCcEEEeCCCCCC---C-HHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCc-c
Q 012478 134 SYGEMVDQGQLITQA-------VSIPVIGDGDNGYG---N-AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRK-V 201 (462)
Q Consensus 134 sl~Eml~~~~~I~ra-------~~iPVIaD~DtGyG---~-~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~-L 201 (462)
..+.++++.+...+. ...||++-+ .|.- + .....+.++++.+. ++.|-|-=. |-+..|.. +
T Consensus 158 G~d~~~~~l~~~~~~~~~~~~~~~~~vgvnI-g~nk~t~~~~~Dy~~~a~~l~~~-ad~ieiNiS-----cPNt~Gl~~l 230 (415)
T 3i65_A 158 GCDKVTENLILFRKRQEEDKLLSKHIVGVSI-GKNKDTVNIVDDLKYCINKIGRY-ADYIAINVS-----SPNTPGLRDN 230 (415)
T ss_dssp CHHHHHHHHHHHHHHHTTCGGGTTCEEEEEE-CCCTTCSCHHHHHHHHHHHHGGG-CSEEEEECC-----CCC-------
T ss_pred hHHHHHHHHHHHHhhccccccccCceEEEEe-ccccCccccHHHHHHHHHHHHhh-CCEEEEECC-----CCCCCCcccc
Confidence 467777777654432 146787877 2211 1 35666777777664 777766443 44444432 3
Q ss_pred cCHHHHHHHHHHHHHHHHhh-----------------CCC-eEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCC
Q 012478 202 VSREEAVMRIKAAVDARKES-----------------GSD-IVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALA 263 (462)
Q Consensus 202 vp~ee~~~kI~AA~~Ar~~~-----------------g~d-~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~ 263 (462)
...+.+.+-+++++++++++ ... ++|--+-|- ..++..+-|++.+++|||.|.+....
T Consensus 231 q~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd~----~~~~i~~iA~~a~~aGaDgIiv~Ntt 306 (415)
T 3i65_A 231 QEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDL----NQEQKKEIADVLLETNIDGMIISNTT 306 (415)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCC----CHHHHHHHHHHHHHHTCSEEEECCCB
T ss_pred cCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCCC----CHHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 34444444555555543210 234 445445442 23467778999999999999987521
Q ss_pred ------------------------CHHHHHHHHHhCC-CCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012478 264 ------------------------SKEEMKAFCEISP-LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316 (462)
Q Consensus 264 ------------------------s~eei~~i~~~v~-~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~a 316 (462)
+.+.++++.+.++ .+|+..+ ||-.-.-+..+.-++|.+.|..+..++.-
T Consensus 307 ~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~----GGI~s~eDa~e~l~aGAd~VqIgra~l~~ 380 (415)
T 3i65_A 307 TQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIAS----GGIFSGLDALEKIEAGASVCQLYSCLVFN 380 (415)
T ss_dssp SCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEC----SSCCSHHHHHHHHHHTEEEEEESHHHHHH
T ss_pred cccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEE----CCCCCHHHHHHHHHcCCCEEEEcHHHHhc
Confidence 1256778888774 3676533 34322223455666899999988887654
No 169
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=94.94 E-value=0.065 Score=52.36 Aligned_cols=82 Identities=6% Similarity=-0.053 Sum_probs=56.2
Q ss_pred HHHHHHHhCCc---EEEec-cHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHH
Q 012478 101 SAKLVEKSGFS---FCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIK 176 (462)
Q Consensus 101 SArl~e~aGfd---aI~vS-G~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~ 176 (462)
.|+.++++||| +|-+. +.-. ..|..+. ..+.+.+.+.++.|.+.+++||++=+-.++ +..++.+.++.+++
T Consensus 111 ~a~~~~~~g~d~~~~iein~~~P~---~~g~~~~-g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~~-~~~~~~~~a~~~~~ 185 (314)
T 2e6f_A 111 MVRRLAPVAQEKGVLLELNLSCPN---VPGKPQV-AYDFEAMRTYLQQVSLAYGLPFGVKMPPYF-DIAHFDTAAAVLNE 185 (314)
T ss_dssp HHHHHHHHHHHHCCEEEEECCCCC---STTCCCG-GGSHHHHHHHHHHHHHHHCSCEEEEECCCC-CHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCcCceEEEEcCCCC---CCCchhh-cCCHHHHHHHHHHHHHhcCCCEEEEECCCC-CHHHHHHHHHHHHh
Confidence 45667788999 77775 2111 1122221 125566677778887778999999876554 56677788899999
Q ss_pred hC-ccEEEeCCC
Q 012478 177 AG-FAGIILEDQ 187 (462)
Q Consensus 177 AG-aaGI~IEDq 187 (462)
+| +++|.+-+.
T Consensus 186 aG~~d~i~v~~~ 197 (314)
T 2e6f_A 186 FPLVKFVTCVNS 197 (314)
T ss_dssp CTTEEEEEECCC
T ss_pred cCCceEEEEeCC
Confidence 99 999987663
No 170
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=94.94 E-value=0.12 Score=50.37 Aligned_cols=154 Identities=12% Similarity=0.094 Sum_probs=93.4
Q ss_pred HHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccE
Q 012478 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAG 181 (462)
Q Consensus 102 Arl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaG 181 (462)
++.++++|++.|-++++..+ -=.|-. .+-.+.++.+.+..++|+.+=.. + .+.+++..++|+..
T Consensus 32 ~~~L~~~Gv~~IE~g~~~~~---~~~p~~-----~~~~e~~~~i~~~~~~~v~~l~~----n----~~~i~~a~~~G~~~ 95 (295)
T 1ydn_A 32 INRLSDCGYARIEATSFVSP---KWVPQL-----ADSREVMAGIRRADGVRYSVLVP----N----MKGYEAAAAAHADE 95 (295)
T ss_dssp HHHHTTTTCSEEEEEECSCT---TTCGGG-----TTHHHHHHHSCCCSSSEEEEECS----S----HHHHHHHHHTTCSE
T ss_pred HHHHHHcCcCEEEEccCcCc---cccccc-----cCHHHHHHHHHhCCCCEEEEEeC----C----HHHHHHHHHCCCCE
Confidence 45667889999998864311 001211 12234445555444677766552 3 35567788899999
Q ss_pred EEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEE-EEec-c--hhhcccHHHHHHHHHHhHhcCCcEE
Q 012478 182 IILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVI-VART-D--SRQALSLEESLRRSRAFADAGADVL 257 (462)
Q Consensus 182 I~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vI-iART-D--A~~~~gldeAI~RakAy~eAGAD~I 257 (462)
|+|-+..++ .|...+--.+.+|.+++++.+++..++.|..... +.-+ + .......+++++-+++..++|||.|
T Consensus 96 V~i~~~~S~---~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i 172 (295)
T 1ydn_A 96 IAVFISASE---GFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEV 172 (295)
T ss_dssp EEEEEESCH---HHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEE
T ss_pred EEEEEecCH---HHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 999654321 1222112246788899988888777765533210 1111 0 0122357889999999999999999
Q ss_pred Eec---CCCCHHHHHHHHHh
Q 012478 258 FID---ALASKEEMKAFCEI 274 (462)
Q Consensus 258 fie---~~~s~eei~~i~~~ 274 (462)
.+. |..+++++.++.+.
T Consensus 173 ~l~Dt~G~~~P~~~~~lv~~ 192 (295)
T 1ydn_A 173 SLGDTIGRGTPDTVAAMLDA 192 (295)
T ss_dssp EEEETTSCCCHHHHHHHHHH
T ss_pred EecCCCCCcCHHHHHHHHHH
Confidence 874 45566666666554
No 171
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=94.89 E-value=0.72 Score=46.97 Aligned_cols=81 Identities=14% Similarity=0.097 Sum_probs=53.9
Q ss_pred CChHHH-HHHHHhCCcEEEec--cHHHHhhhccCCCCCCCCHH-HHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHH
Q 012478 97 FDALSA-KLVEKSGFSFCFTS--GFSISAARLALPDTGFISYG-EMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVK 172 (462)
Q Consensus 97 yDalSA-rl~e~aGfdaI~vS--G~avSas~lG~PD~g~vsl~-Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk 172 (462)
|+.-.+ +.++.++.+++.+- ...-. . .|.. .-.+. ..++.++.|++.+++||++-. .|+|-. .+.++
T Consensus 135 ~~~~~~~~av~~~~a~al~Ihln~~~~~--~--~p~g-~~~~~~~~~~~i~~i~~~~~vPVivK~-vG~g~s---~~~A~ 205 (368)
T 3vkj_A 135 YGLKEFQDAIQMIEADAIAVHLNPAQEV--F--QPEG-EPEYQIYALEKLRDISKELSVPIIVKE-SGNGIS---METAK 205 (368)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECCHHHHH--H--SSSC-CCBCBTHHHHHHHHHHTTCSSCEEEEC-SSSCCC---HHHHH
T ss_pred CCHHHHHHHHHHhcCCCeEEEecchhhh--h--CCCC-CchhhHHHHHHHHHHHHHcCCCEEEEe-CCCCCC---HHHHH
Confidence 776665 55776777777765 22221 1 1321 11222 466778888888999999997 777743 35577
Q ss_pred HHHHhCccEEEeCC
Q 012478 173 GYIKAGFAGIILED 186 (462)
Q Consensus 173 ~l~~AGaaGI~IED 186 (462)
.++++||++|.+-.
T Consensus 206 ~l~~aGad~I~V~g 219 (368)
T 3vkj_A 206 LLYSYGIKNFDTSG 219 (368)
T ss_dssp HHHHTTCCEEECCC
T ss_pred HHHhCCCCEEEEeC
Confidence 88999999999854
No 172
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=94.87 E-value=0.8 Score=46.42 Aligned_cols=158 Identities=18% Similarity=0.181 Sum_probs=101.0
Q ss_pred HHhCCcEEEeccHHHHhhhccCCCC-CCCCHH---HHHHHHHHHHhhc-CCcEEEeC---------------CCCCC-CH
Q 012478 106 EKSGFSFCFTSGFSISAARLALPDT-GFISYG---EMVDQGQLITQAV-SIPVIGDG---------------DNGYG-NA 164 (462)
Q Consensus 106 e~aGfdaI~vSG~avSas~lG~PD~-g~vsl~---Eml~~~~~I~ra~-~iPVIaD~---------------DtGyG-~~ 164 (462)
.+.|.+++.+=|.--. .|..|. +.-.++ =+...++.|.+.. ++-||.|. ++|+= |.
T Consensus 79 ~~lGi~~v~LFgv~~~---~~~KD~~gs~A~~~~g~v~rair~iK~~~pdl~VitDvcLc~YT~HGHcGil~~~g~V~ND 155 (342)
T 1h7n_A 79 VAKGLRSVILFGVPLI---PGTKDPVGTAADDPAGPVIQGIKFIREYFPELYIICDVCLCEYTSHGHCGVLYDDGTINRE 155 (342)
T ss_dssp HHTTCCEEEEEEECCS---TTCCBTTCGGGGCTTSHHHHHHHHHHHHCTTSEEEEEECSTTTBTTCCSSCBCTTSSBCHH
T ss_pred HHCCCCEEEEecccCc---cCCCCccccccCCCCChHHHHHHHHHHHCCCeEEEEeeecccccCCCceeEECCCCcCccH
Confidence 3569999887543100 011221 222222 2455677777665 47788885 34432 33
Q ss_pred HHHH---HHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCC--CeEEEEec--------
Q 012478 165 MNVK---RTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGS--DIVIVART-------- 231 (462)
Q Consensus 165 ~nv~---rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~--d~vIiART-------- 231 (462)
..+. +..-.+.+|||+.|-=-|- |+| ||.|++++.++.|- +.-|.+-+
T Consensus 156 ~Tl~~Lak~Als~A~AGAdiVAPSdM--------MDG-----------rV~aIR~aLd~~G~~~~v~ImsYsaKyASafY 216 (342)
T 1h7n_A 156 RSVSRLAAVAVNYAKAGAHCVAPSDM--------IDG-----------RIRDIKRGLINANLAHKTFVLSYAAKFSGNLY 216 (342)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEECCC--------CTT-----------HHHHHHHHHHHTTCTTTCEEEEEEEEBCSSCC
T ss_pred HHHHHHHHHHHHHHHcCCCeeecccc--------ccc-----------HHHHHHHHHHHCCCccCceEeechHHHhHHhh
Confidence 3333 3344556899999877664 443 66777777665443 56888776
Q ss_pred ----chhhc--------------ccHHHHHHHHHHhHhcCCcEEEe-cCCCCHHHHHHHHHhCCCCceeeeee
Q 012478 232 ----DSRQA--------------LSLEESLRRSRAFADAGADVLFI-DALASKEEMKAFCEISPLVPKMANML 285 (462)
Q Consensus 232 ----DA~~~--------------~gldeAI~RakAy~eAGAD~Ifi-e~~~s~eei~~i~~~v~~vP~~~N~l 285 (462)
||... ..-+||++.+..=.+-|||+|+| ++++-.+.++++.+.+|.+|+.+=.+
T Consensus 217 GPFRdAa~Sap~~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKPal~YLDIi~~vk~~~p~~P~aaYqV 289 (342)
T 1h7n_A 217 GPFRDAACSAPSNGDRKCYQLPPAGRGLARRALERDMSEGADGIIVKPSTFYLDIMRDASEICKDLPICAYHV 289 (342)
T ss_dssp HHHHHHHTCCCSSSCSTTTSBCTTCHHHHHHHHHHHHHTTCSEEEEESSGGGHHHHHHHHHHTTTSCEEEEEC
T ss_pred HHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCCeEEEecCccHHHHHHHHHHhccCCCeEEEEc
Confidence 33211 12689999999999999999999 88999999999999997788754333
No 173
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=94.86 E-value=0.27 Score=48.50 Aligned_cols=126 Identities=13% Similarity=0.139 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHhhc---------CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCC----------CCCC
Q 012478 135 YGEMVDQGQLITQAV---------SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPK----------GCGH 195 (462)
Q Consensus 135 l~Eml~~~~~I~ra~---------~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PK----------rCGH 195 (462)
...+.+.++.|.+.+ ++||++=+-.++ +.+++.+.++.++++|+++|++-...... ..|.
T Consensus 187 ~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~-~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg 265 (336)
T 1f76_A 187 GEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDL-SEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGG 265 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCC-CHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSE
T ss_pred HHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCC-CHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCC
Confidence 333444455555544 799999876543 34567888899999999999997653100 0111
Q ss_pred CCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecC--CC-CHHHHHHHH
Q 012478 196 TRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDA--LA-SKEEMKAFC 272 (462)
Q Consensus 196 ~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~--~~-s~eei~~i~ 272 (462)
..|+++.|. ...-++.++++. +.++-|++=-.-.. .+ .+..+.++|||+|.+-. +. +++.++++.
T Consensus 266 ~~g~~~~~~--~~~~i~~i~~~~---~~~ipVi~~GGI~~---~~----da~~~l~~GAd~V~igr~~l~~~P~~~~~i~ 333 (336)
T 1f76_A 266 LSGRPLQLK--STEIIRRLSLEL---NGRLPIIGVGGIDS---VI----AAREKIAAGASLVQIYSGFIFKGPPLIKEIV 333 (336)
T ss_dssp EEEGGGHHH--HHHHHHHHHHHH---TTSSCEEEESSCCS---HH----HHHHHHHHTCSEEEESHHHHHHCHHHHHHHH
T ss_pred cCCchhHHH--HHHHHHHHHHHh---CCCCCEEEECCCCC---HH----HHHHHHHCCCCEEEeeHHHHhcCcHHHHHHH
Confidence 123333322 223333333332 22344444322221 12 35555668999999843 22 566666665
Q ss_pred H
Q 012478 273 E 273 (462)
Q Consensus 273 ~ 273 (462)
+
T Consensus 334 ~ 334 (336)
T 1f76_A 334 T 334 (336)
T ss_dssp H
T ss_pred h
Confidence 4
No 174
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=94.81 E-value=0.55 Score=47.89 Aligned_cols=148 Identities=17% Similarity=0.206 Sum_probs=86.3
Q ss_pred CCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHH
Q 012478 133 ISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIK 212 (462)
Q Consensus 133 vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~ 212 (462)
++.++..+.++.+.+...++|-+- .|... ...+.++.++++|++.|+|. .. .||. ++..+.|+
T Consensus 79 ~s~e~~~~~i~~vk~~~~l~vga~--vg~~~--~~~~~~~~lieaGvd~I~id-ta----~G~~--------~~~~~~I~ 141 (366)
T 4fo4_A 79 MSIEQQAAQVHQVKISGGLRVGAA--VGAAP--GNEERVKALVEAGVDVLLID-SS----HGHS--------EGVLQRIR 141 (366)
T ss_dssp SCHHHHHHHHHHHHTTTSCCCEEE--CCSCT--TCHHHHHHHHHTTCSEEEEE-CS----CTTS--------HHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCceeEEEE--eccCh--hHHHHHHHHHhCCCCEEEEe-CC----CCCC--------HHHHHHHH
Confidence 578888888888776543444332 33321 24556788899999999983 21 1231 34556666
Q ss_pred HHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEe---cC------------CCCHHHHHHHHH---h
Q 012478 213 AAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFI---DA------------LASKEEMKAFCE---I 274 (462)
Q Consensus 213 AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifi---e~------------~~s~eei~~i~~---~ 274 (462)
.+++.. ++..|++-+-. . .+.++.+.++|||.|.+ ++ .+..+.+.++.+ .
T Consensus 142 ~ik~~~----p~v~Vi~G~v~----t----~e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~ 209 (366)
T 4fo4_A 142 ETRAAY----PHLEIIGGNVA----T----AEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANE 209 (366)
T ss_dssp HHHHHC----TTCEEEEEEEC----S----HHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGG
T ss_pred HHHHhc----CCCceEeeeeC----C----HHHHHHHHHcCCCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHhh
Confidence 665542 45655543211 1 33577888999999998 21 233344555443 3
Q ss_pred CCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHH
Q 012478 275 SPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLI 314 (462)
Q Consensus 275 v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll 314 (462)
+. +|+++ .||-.-.-...+.-++|...|..+..++
T Consensus 210 ~~-iPVIA----~GGI~~~~di~kala~GAd~V~vGs~f~ 244 (366)
T 4fo4_A 210 YG-IPVIA----DGGIRFSGDISKAIAAGASCVMVGSMFA 244 (366)
T ss_dssp GT-CCEEE----ESCCCSHHHHHHHHHTTCSEEEESTTTT
T ss_pred cC-CeEEE----eCCCCCHHHHHHHHHcCCCEEEEChHhh
Confidence 32 56543 3343111245666778999888876544
No 175
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=94.80 E-value=1.1 Score=45.60 Aligned_cols=141 Identities=18% Similarity=0.156 Sum_probs=92.8
Q ss_pred CcEEEeCCCC-CCCHHHHHHHH-HHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEE
Q 012478 151 IPVIGDGDNG-YGNAMNVKRTV-KGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV 228 (462)
Q Consensus 151 iPVIaD~DtG-yG~~~nv~rtV-k~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIi 228 (462)
+|+-+-...+ +.+++.+.+.+ +.+.+.|...+||-=+ ........+.++-+++|+|++++. |+++.|.
T Consensus 126 v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG-------~~~~~~~~~~~~d~~~v~avR~a~---g~~~~l~ 195 (393)
T 4dwd_A 126 LPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWD-------GDRTRCDVDIPGDIAKARAVRELL---GPDAVIG 195 (393)
T ss_dssp EEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECC-------CCTTCCSCCHHHHHHHHHHHHHHH---CTTCCEE
T ss_pred eeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccC-------CCCcccccCHHHHHHHHHHHHHHh---CCCCeEE
Confidence 6666543222 35678888888 8999999999999432 211111235677888999888774 5566554
Q ss_pred EecchhhcccHHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHH---HHhc
Q 012478 229 ARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEEL 302 (462)
Q Consensus 229 ARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~e---L~~l 302 (462)
. |+......++|++-++++.+.|.+.| |-+ .+.+.++++.+..+ +|+..+ .. ..+..+ +-+.
T Consensus 196 v--DaN~~~~~~~A~~~~~~L~~~~i~~i--EqP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~ 263 (393)
T 4dwd_A 196 F--DANNGYSVGGAIRVGRALEDLGYSWF--EEPVQHYHVGAMGEVAQRLD-ITVSAG-----EQ--TYTLQALKDLILS 263 (393)
T ss_dssp E--ECTTCCCHHHHHHHHHHHHHTTCSEE--ECCSCTTCHHHHHHHHHHCS-SEEEBC-----TT--CCSHHHHHHHHHH
T ss_pred E--ECCCCCCHHHHHHHHHHHHhhCCCEE--ECCCCcccHHHHHHHHhhCC-CCEEec-----CC--cCCHHHHHHHHHc
Confidence 3 67777789999999999999987644 543 36788899988875 666533 21 234544 4445
Q ss_pred CCCEEeccchH
Q 012478 303 GFKLVAYPLSL 313 (462)
Q Consensus 303 Gv~~V~yp~~l 313 (462)
|++.|..-..-
T Consensus 264 ~~d~v~~k~~~ 274 (393)
T 4dwd_A 264 GVRMVQPDIVK 274 (393)
T ss_dssp TCCEECCCTTT
T ss_pred CCCEEEeCccc
Confidence 77666664443
No 176
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=94.79 E-value=0.059 Score=53.55 Aligned_cols=141 Identities=16% Similarity=0.168 Sum_probs=93.7
Q ss_pred chHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHh-------hhccCCC---CCC-CCHHHHHHHHHH
Q 012478 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISA-------ARLALPD---TGF-ISYGEMVDQGQL 144 (462)
Q Consensus 76 ~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSa-------s~lG~PD---~g~-vsl~Eml~~~~~ 144 (462)
..-+.|++..++-+..++-.+||..++..+++. .|.+.++++.+-. +.+|.|= ++. .+++||...++.
T Consensus 75 ~GL~~L~~~~~e~Glp~~tev~d~~~v~~l~~~-vd~lkIgA~~~~n~~LLr~~a~~gkPVilK~G~~~t~~e~~~ave~ 153 (288)
T 3tml_A 75 EGLRILSEVKRQLGLPVLTDVHSIDEIEQVASV-VDVLQTPAFLCRQTDFIHACARSGKPVNIKKGQFLAPHDMKNVIDK 153 (288)
T ss_dssp HHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH-CSEEEECGGGTTCHHHHHHHHTSSSCEEEECCTTCCTTHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHh-CCEEEECcccccCHHHHHHHHccCCcEEEeCCCCCCHHHHHHHHHH
Confidence 344567777777778888999999999999998 9999999843211 2456663 355 688888776665
Q ss_pred HHh-------------------------------------hcCCcEEEeCCCC-----------CCCHHHHHHHHHHHHH
Q 012478 145 ITQ-------------------------------------AVSIPVIGDGDNG-----------YGNAMNVKRTVKGYIK 176 (462)
Q Consensus 145 I~r-------------------------------------a~~iPVIaD~DtG-----------yG~~~nv~rtVk~l~~ 176 (462)
|.. .+++||++|.++. -|...-|....+..+.
T Consensus 154 i~~~Gn~~~~~~~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA 233 (288)
T 3tml_A 154 ARDAAREAGLSEDRFMACERGVSFGYNNLVSDMRSLAIMRETNAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVA 233 (288)
T ss_dssp HHHHHHTTTCCSCCEEEEECCEECSSSCEECCHHHHHHGGGGSSCEEEEHHHHTCCCC--------CTTHHHHHHHHHHH
T ss_pred HHHcCCCccCCCCcEEEEeCCCCCCCCcCcCCHHHHHHHHhcCCcEEEcCCcccccCCcccCCCCCchhhHHHHHHHHHH
Confidence 531 1358999997774 2433445566677778
Q ss_pred hCccEEEeCCCCCCCCCCCCCCCcccCH---HHHHHHHHHHHHHH
Q 012478 177 AGFAGIILEDQVSPKGCGHTRGRKVVSR---EEAVMRIKAAVDAR 218 (462)
Q Consensus 177 AGaaGI~IEDq~~PKrCGH~~gk~Lvp~---ee~~~kI~AA~~Ar 218 (462)
+||+|+.||=-..|.+-= .+++.-+++ +++++.|+++..+.
T Consensus 234 ~GadGl~iE~H~~pd~al-~D~~~sl~p~el~~lv~~ir~i~~al 277 (288)
T 3tml_A 234 TGVAGLFMETHPNPAEAK-SDGPNAVPLNRMGALLETLVTLDQAV 277 (288)
T ss_dssp HCCSEEEEEEESSGGGCS-SCGGGCEEGGGHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeeccChhhcC-CchhhcCCHHHHHHHHHHHHHHHHHh
Confidence 999999999876553211 145544444 44555555555544
No 177
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=94.79 E-value=0.62 Score=42.90 Aligned_cols=142 Identities=13% Similarity=0.100 Sum_probs=92.4
Q ss_pred HHhhcCCcEEEeCCCCCCC-HHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCC
Q 012478 145 ITQAVSIPVIGDGDNGYGN-AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGS 223 (462)
Q Consensus 145 I~ra~~iPVIaD~DtGyG~-~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~ 223 (462)
+.+..+.+++.|.=.+ + +.++.+.++.+.++||+.|.+--.. | .++ |+.++++ +
T Consensus 46 lr~~~~~~v~~D~kl~--DI~~t~~~~v~~~~~~Gad~vtvh~~~---------g------~~~---i~~~~~~----~- 100 (208)
T 2czd_A 46 LKEETGVEIIADLKLA--DIPNTNRLIARKVFGAGADYVIVHTFV---------G------RDS---VMAVKEL----G- 100 (208)
T ss_dssp HHHHHCCEEEEEEEEC--SCHHHHHHHHHHHHHTTCSEEEEESTT---------C------HHH---HHHHHTT----S-
T ss_pred HHHcCCCEEEEEeeeC--chHHHHHHHHHHHHhcCCCEEEEeccC---------C------HHH---HHHHHHh----C-
Confidence 4333368899998775 4 3556778899999999988762221 1 123 4444433 2
Q ss_pred CeEEEEecchhhcc-c-HHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCC-CCCHHHHH
Q 012478 224 DIVIVARTDSRQAL-S-LEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTP-ILNPLELE 300 (462)
Q Consensus 224 d~vIiARTDA~~~~-g-ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP-~ls~~eL~ 300 (462)
+..++..|...... . .+.....++...+.|+|.+.+-. ...++++++.+..+..+ + ++.+ |-.+ .-++.++.
T Consensus 101 gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~-~~~~~i~~lr~~~~~~~-~--iv~g-GI~~~g~~~~~~~ 175 (208)
T 2czd_A 101 EIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPG-TRPERIGYIRDRLKEGI-K--ILAP-GIGAQGGKAKDAV 175 (208)
T ss_dssp EEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCC-SSTHHHHHHHHHSCTTC-E--EEEC-CCCSSTTHHHHHH
T ss_pred CcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECC-CChHHHHHHHHhCCCCe-E--EEEC-CCCCCCCCHHHHH
Confidence 68888888764321 1 34455667778899999986643 33577888877764212 2 2333 4443 33678999
Q ss_pred hcCCCEEeccchHHHH
Q 012478 301 ELGFKLVAYPLSLIGV 316 (462)
Q Consensus 301 ~lGv~~V~yp~~ll~a 316 (462)
++|.+.++.+...+.+
T Consensus 176 ~aGad~vvvGr~I~~a 191 (208)
T 2czd_A 176 KAGADYIIVGRAIYNA 191 (208)
T ss_dssp HHTCSEEEECHHHHTS
T ss_pred HcCCCEEEEChHHhcC
Confidence 9999999999887764
No 178
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=94.78 E-value=0.14 Score=51.85 Aligned_cols=126 Identities=16% Similarity=0.294 Sum_probs=89.0
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccH
Q 012478 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (462)
Q Consensus 160 GyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gl 239 (462)
|.++++.+.+.++.+.+.|...+||- +|. +.++-+++|+|++++. |+++.| +-|+......
T Consensus 142 ~~~~~e~~~~~a~~~~~~G~~~iKiK-------~G~-------~~~~d~~~v~avR~a~---g~~~~l--~vDan~~~~~ 202 (378)
T 3eez_A 142 GAKSVEETRAVIDRYRQRGYVAHSVK-------IGG-------DVERDIARIRDVEDIR---EPGEIV--LYDVNRGWTR 202 (378)
T ss_dssp CSCCHHHHHHHHHHHHHTTCCEEEEE-------CCS-------CHHHHHHHHHHHTTSC---CTTCEE--EEECTTCCCH
T ss_pred cCCCHHHHHHHHHHHHhCCCCEEEec-------cCC-------CHHHHHHHHHHHHHHc---CCCceE--EEECCCCCCH
Confidence 44578888888999999999999993 332 4567788888877663 567666 4577777889
Q ss_pred HHHHHHHHHhHhcCCcEEEecCC-CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHH---HHhcC-CCEEeccchHH
Q 012478 240 EESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELG-FKLVAYPLSLI 314 (462)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~e---L~~lG-v~~V~yp~~ll 314 (462)
++|++-++++.+.|. |+|-+ ++.+.++++.+.++ +|+..+ +. ..+..+ +-+.| ++.|..-..-.
T Consensus 203 ~~a~~~~~~l~~~~i---~iEqP~~~~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~l~~~~~d~v~ik~~~~ 271 (378)
T 3eez_A 203 QQALRVMRATEDLHV---MFEQPGETLDDIAAIRPLHS-APVSVD-----EC--LVTLQDAARVARDGLAEVFGIKLNRV 271 (378)
T ss_dssp HHHHHHHHHTGGGTC---CEECCSSSHHHHHHTGGGCC-CCEEEC-----TT--CCSHHHHHHHHHTTCCSEEEEEHHHH
T ss_pred HHHHHHHHHhccCCe---EEecCCCCHHHHHHHHhhCC-CCEEEC-----CC--CCCHHHHHHHHHcCCCCEEEeCchhc
Confidence 999999999999874 66654 57788888888775 676543 21 234444 44445 77776655544
Q ss_pred H
Q 012478 315 G 315 (462)
Q Consensus 315 ~ 315 (462)
.
T Consensus 272 G 272 (378)
T 3eez_A 272 G 272 (378)
T ss_dssp T
T ss_pred C
Confidence 3
No 179
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=94.76 E-value=0.98 Score=44.44 Aligned_cols=129 Identities=20% Similarity=0.220 Sum_probs=85.4
Q ss_pred CCCCHHHHHHHHHHHHH--hCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEE-ecchhhc
Q 012478 160 GYGNAMNVKRTVKGYIK--AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA-RTDSRQA 236 (462)
Q Consensus 160 GyG~~~nv~rtVk~l~~--AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiA-RTDA~~~ 236 (462)
|--++..+.++.+..-+ .|-.=||||=-. ..+-+.| +..+.++++....+ .+|.++- =+|.
T Consensus 82 g~~ta~eAv~~a~lare~~~~~~~iKlEv~~--------d~~~llp--D~~~tv~aa~~L~~---~Gf~Vlpy~~dd--- 145 (265)
T 1wv2_A 82 GCYDAVEAVRTCRLARELLDGHNLVKLEVLA--------DQKTLFP--NVVETLKAAEQLVK---DGFDVMVYTSDD--- 145 (265)
T ss_dssp TCCSHHHHHHHHHHHHTTTTSCCEEEECCBS--------CTTTCCB--CHHHHHHHHHHHHT---TTCEEEEEECSC---
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCeEEEEeec--------CccccCc--CHHHHHHHHHHHHH---CCCEEEEEeCCC---
Confidence 43467777777766655 377889998642 2233443 23445556655544 3688774 4554
Q ss_pred ccHHHHHHHHHHhHhcCCcEEEecC--------CCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEe
Q 012478 237 LSLEESLRRSRAFADAGADVLFIDA--------LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVA 308 (462)
Q Consensus 237 ~gldeAI~RakAy~eAGAD~Ifie~--------~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~ 308 (462)
+.-|++++++|+++|++++ +.+.+.++.+.+... +|+++ +++=.+| -......++|+.-|.
T Consensus 146 ------~~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~-vPVI~---eGGI~TP-sDAa~AmeLGAdgVl 214 (265)
T 1wv2_A 146 ------PIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEAK-VPVLV---DAGVGTA-SDAAIAMELGCEAVL 214 (265)
T ss_dssp ------HHHHHHHHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHHHCS-SCBEE---ESCCCSH-HHHHHHHHHTCSEEE
T ss_pred ------HHHHHHHHHhCCCEEEeCCccCCCCCCcCCHHHHHHHHhcCC-CCEEE---eCCCCCH-HHHHHHHHcCCCEEE
Confidence 3469999999999999854 357889999988654 67653 4422333 245678889999999
Q ss_pred ccchHHH
Q 012478 309 YPLSLIG 315 (462)
Q Consensus 309 yp~~ll~ 315 (462)
.+....+
T Consensus 215 VgSAI~~ 221 (265)
T 1wv2_A 215 MNTAIAH 221 (265)
T ss_dssp ESHHHHT
T ss_pred EChHHhC
Confidence 9887654
No 180
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=94.76 E-value=0.2 Score=47.64 Aligned_cols=105 Identities=12% Similarity=0.072 Sum_probs=67.3
Q ss_pred HHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCC---CCCCHHHHHHHHHHHHhhcCCcEEEe
Q 012478 80 SLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDT---GFISYGEMVDQGQLITQAVSIPVIGD 156 (462)
Q Consensus 80 ~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~---g~vsl~Eml~~~~~I~ra~~iPVIaD 156 (462)
.+-+..++.+..+++.+++.--|+.++++|+|.|.++-. |+.+. ...++ +.++++.+. ++|||+.
T Consensus 120 ~~i~~~~~~g~~v~~~v~t~eea~~a~~~Gad~Ig~~~~-------g~t~~~~~~~~~~----~~i~~l~~~-~ipvIA~ 187 (232)
T 3igs_A 120 ALLARIHHHHLLTMADCSSVDDGLACQRLGADIIGTTMS-------GYTTPDTPEEPDL----PLVKALHDA-GCRVIAE 187 (232)
T ss_dssp HHHHHHHHTTCEEEEECCSHHHHHHHHHTTCSEEECTTT-------TSSSSSCCSSCCH----HHHHHHHHT-TCCEEEE
T ss_pred HHHHHHHHCCCEEEEeCCCHHHHHHHHhCCCCEEEEcCc-------cCCCCCCCCCCCH----HHHHHHHhc-CCcEEEE
Confidence 344444445788999999999999999999999975421 22211 12233 344556666 8999987
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHH
Q 012478 157 GDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAV 215 (462)
Q Consensus 157 ~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~ 215 (462)
. |..++.++. ++.++||+||.+ +. .++.+++...++..+.
T Consensus 188 G--GI~t~~d~~----~~~~~GadgV~V-Gs------------al~~p~~~~~~~~~~i 227 (232)
T 3igs_A 188 G--RYNSPALAA----EAIRYGAWAVTV-GS------------AITRLEHICGWYNDAL 227 (232)
T ss_dssp S--CCCSHHHHH----HHHHTTCSEEEE-CH------------HHHCHHHHHHHHHHHH
T ss_pred C--CCCCHHHHH----HHHHcCCCEEEE-eh------------HhcCHHHHHHHHHHHH
Confidence 3 455655554 556789999999 22 2444555555555443
No 181
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=94.74 E-value=0.48 Score=48.61 Aligned_cols=112 Identities=9% Similarity=0.139 Sum_probs=76.7
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCc-ccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccH
Q 012478 161 YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRK-VVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (462)
Q Consensus 161 yG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~-Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gl 239 (462)
.++++.+.+.++.+.+.|..++||--.. ...|+.+... .-+.++-+++|++++++. |+++.|.. |+.....+
T Consensus 142 ~~~~e~~~~~a~~~~~~G~~~iKlK~g~--~~~~~~g~~~~~~~~~~d~~~v~avR~a~---G~d~~l~v--DaN~~~~~ 214 (412)
T 4e4u_A 142 YDDPDLAAECAAENVKLGFTAVKFDPAG--PYTAYSGHQLSLEVLDRCELFCRRVREAV---GSKADLLF--GTHGQMVP 214 (412)
T ss_dssp SSCHHHHHHHHHHHHHHTCSEEEECCSC--CCBTTCCBCCCHHHHHHHHHHHHHHHHHH---TTSSEEEE--CCCSCBCH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCC--CCccccccccchhhHHHHHHHHHHHHHHh---CCCCeEEE--ECCCCCCH
Confidence 3577888888999999999999993211 0012211110 012466778888887764 66776654 67677789
Q ss_pred HHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceee
Q 012478 240 EESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMA 282 (462)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~ 282 (462)
++|++-++++.+.|.+. +|-+ .+.+.++++.+.++ +|+..
T Consensus 215 ~~A~~~~~~L~~~~i~~--iEeP~~~~d~~~~~~l~~~~~-iPIa~ 257 (412)
T 4e4u_A 215 SSAIRLAKRLEKYDPLW--FEEPVPPGQEEAIAQVAKHTS-IPIAT 257 (412)
T ss_dssp HHHHHHHHHHGGGCCSE--EECCSCSSCHHHHHHHHHTCS-SCEEE
T ss_pred HHHHHHHHHhhhcCCcE--EECCCChhhHHHHHHHHhhCC-CCEEe
Confidence 99999999999998764 4543 26788899988775 67653
No 182
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=94.62 E-value=0.41 Score=48.85 Aligned_cols=167 Identities=15% Similarity=0.128 Sum_probs=91.4
Q ss_pred ccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHH
Q 012478 95 ACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGY 174 (462)
Q Consensus 95 ~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l 174 (462)
++=|.-.|+.+.++|.-.+. + ..++.+|+...++.. ..++.+- .|......+.++.+
T Consensus 52 ~vte~~lA~A~a~~Gg~gvi--~-------------~~~s~ee~~~~i~~~----~~~~~~~----~g~~~~~~e~~~~a 108 (361)
T 3r2g_A 52 TITESNMANFMHSKGAMGAL--H-------------RFMTIEENIQEFKKC----KGPVFVS----VGCTENELQRAEAL 108 (361)
T ss_dssp TTCSHHHHHHHHHTTCEEBC--C-------------SCSCHHHHHHHHHTC----CSCCBEE----ECSSHHHHHHHHHH
T ss_pred CchHHHHHHHHHHcCCCEEE--e-------------CCCCHHHHHHHHhhc----ceEEEEE----cCCCHHHHHHHHHH
Confidence 44567777888887732221 1 117788877665432 2222221 23335567788999
Q ss_pred HHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCC
Q 012478 175 IKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGA 254 (462)
Q Consensus 175 ~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGA 254 (462)
+++|++.|.| |-. +||. +.+.+.|+.++++. ++..|++.+- .. .+.|+.+.++||
T Consensus 109 ~~aGvdvI~i-d~a----~G~~--------~~~~e~I~~ir~~~----~~~~Vi~G~V----~T----~e~A~~a~~aGa 163 (361)
T 3r2g_A 109 RDAGADFFCV-DVA----HAHA--------KYVGKTLKSLRQLL----GSRCIMAGNV----AT----YAGADYLASCGA 163 (361)
T ss_dssp HHTTCCEEEE-ECS----CCSS--------HHHHHHHHHHHHHH----TTCEEEEEEE----CS----HHHHHHHHHTTC
T ss_pred HHcCCCEEEE-eCC----CCCc--------HhHHHHHHHHHHhc----CCCeEEEcCc----CC----HHHHHHHHHcCC
Confidence 9999998887 432 3442 22334444444432 3566666421 12 235788899999
Q ss_pred cEEEe--cC-------------CCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012478 255 DVLFI--DA-------------LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 255 D~Ifi--e~-------------~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
|+|.+ ++ .+..+.+.++++... |++ ..||-.-.-+....-++|.+.|..+..++.
T Consensus 164 D~I~Vg~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~~--PVI----AdGGI~~~~di~kALa~GAd~V~iGr~f~~ 233 (361)
T 3r2g_A 164 DIIKAGIGGGSVCSTRIKTGFGVPMLTCIQDCSRADR--SIV----ADGGIKTSGDIVKALAFGADFVMIGGMLAG 233 (361)
T ss_dssp SEEEECCSSSSCHHHHHHHCCCCCHHHHHHHHTTSSS--EEE----EESCCCSHHHHHHHHHTTCSEEEESGGGTT
T ss_pred CEEEEcCCCCcCccccccCCccHHHHHHHHHHHHhCC--CEE----EECCCCCHHHHHHHHHcCCCEEEEChHHhC
Confidence 99997 21 122233333333221 433 333422112345566789999988876543
No 183
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=94.61 E-value=0.22 Score=50.06 Aligned_cols=133 Identities=12% Similarity=0.114 Sum_probs=90.1
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEe
Q 012478 151 IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVAR 230 (462)
Q Consensus 151 iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiAR 230 (462)
+|+..-. |.++++...+.++++.++|..+|+|- +||. +.++.+++|++++++. |+++.+ |
T Consensus 135 v~~~~~~--~~~~~e~~~~~a~~~~~~Gf~~iKik-------~g~~------~~~~~~e~v~avr~a~---g~~~~l--~ 194 (378)
T 2qdd_A 135 VPINSSI--STGTPDQMLGLIAEAAAQGYRTHSAK-------IGGS------DPAQDIARIEAISAGL---PDGHRV--T 194 (378)
T ss_dssp EEBEEEE--CSCCHHHHHHHHHHHHHHTCCEEEEE-------CCSS------CHHHHHHHHHHHHHSC---CTTCEE--E
T ss_pred CceEEEe--cCCCHHHHHHHHHHHHHHhhhheeec-------CCCC------ChHHHHHHHHHHHHHh---CCCCEE--E
Confidence 5544322 44678888888899999999999982 4552 3567788888887763 566665 5
Q ss_pred cchhhcccHHHHHHHHHHhHhcCCcEEEecCC-CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHh---cC-CC
Q 012478 231 TDSRQALSLEESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE---LG-FK 305 (462)
Q Consensus 231 TDA~~~~gldeAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~---lG-v~ 305 (462)
.|+.....++++++-++++. .|. |+|-+ ++.+.++++.+.++ +|+..+ +. ..+.+++++ .| ++
T Consensus 195 vDan~~~~~~~a~~~~~~l~-~~i---~iEqP~~d~~~~~~l~~~~~-iPI~~d-----E~--~~~~~~~~~~i~~~~~d 262 (378)
T 2qdd_A 195 FDVNRAWTPAIAVEVLNSVR-ARD---WIEQPCQTLDQCAHVARRVA-NPIMLD-----EC--LHEFSDHLAAWSRGACE 262 (378)
T ss_dssp EECTTCCCHHHHHHHHTSCC-CCC---EEECCSSSHHHHHHHHTTCC-SCEEEC-----TT--CCSHHHHHHHHHHTCCS
T ss_pred EeCCCCCCHHHHHHHHHHhC-CCc---EEEcCCCCHHHHHHHHHhCC-CCEEEC-----CC--cCCHHHHHHHHHhCCCC
Confidence 67767778899999999996 554 77653 47788889988765 676543 22 234544443 34 77
Q ss_pred EEeccchHHH
Q 012478 306 LVAYPLSLIG 315 (462)
Q Consensus 306 ~V~yp~~ll~ 315 (462)
.|..-..-..
T Consensus 263 ~v~ik~~~~G 272 (378)
T 2qdd_A 263 GVKIKPNRVG 272 (378)
T ss_dssp EEEECHHHHT
T ss_pred EEEecccccC
Confidence 7777555433
No 184
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=94.60 E-value=0.38 Score=49.82 Aligned_cols=154 Identities=17% Similarity=0.241 Sum_probs=90.4
Q ss_pred HHHHHHHHHhCccEEEeCCCC-----------CCCCCCCCCCCcccCH-HHHHHHHHHHHHHHH-hhCCCeEEEEecchh
Q 012478 168 KRTVKGYIKAGFAGIILEDQV-----------SPKGCGHTRGRKVVSR-EEAVMRIKAAVDARK-ESGSDIVIVARTDSR 234 (462)
Q Consensus 168 ~rtVk~l~~AGaaGI~IEDq~-----------~PKrCGH~~gk~Lvp~-ee~~~kI~AA~~Ar~-~~g~d~vIiARTDA~ 234 (462)
.+++++.++||.+||.|-..- ..||...-+|--|-.. .-..+-|+|++++.. ..+++|.|--|.-..
T Consensus 173 ~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~ 252 (419)
T 3l5a_A 173 RDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPE 252 (419)
T ss_dssp HHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSC
T ss_pred HHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecccc
Confidence 344566778999999997652 1344444344321222 223444455554432 225789888885442
Q ss_pred ---h---cccHHHHHHHHHHhHh-cCCcEEEecCCC---------------CHHHHHHHHHhCC-CCceeeeeeecCC-C
Q 012478 235 ---Q---ALSLEESLRRSRAFAD-AGADVLFIDALA---------------SKEEMKAFCEISP-LVPKMANMLEGGG-K 290 (462)
Q Consensus 235 ---~---~~gldeAI~RakAy~e-AGAD~Ifie~~~---------------s~eei~~i~~~v~-~vP~~~N~l~~~g-~ 290 (462)
. ...+++.++-++.+.+ +|+|.|-+.+.. ..+.++.+.+.++ .+|+++| |+ .
T Consensus 253 ~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~----GgI~ 328 (419)
T 3l5a_A 253 ETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIAS----GGIN 328 (419)
T ss_dssp EEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEEC----SSCC
T ss_pred cccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEE----CCCC
Confidence 1 2358999999999999 999999775421 1235566666664 3676644 23 2
Q ss_pred CCCCCHHHHHhcCCCEEeccchHHHHHHHHHHHHHHHHHcCC
Q 012478 291 TPILNPLELEELGFKLVAYPLSLIGVSVRAMQDALTAIKGGR 332 (462)
Q Consensus 291 tP~ls~~eL~~lGv~~V~yp~~ll~aa~~Am~~~l~~l~~g~ 332 (462)
+|. ..+++-+. +.+|.++-.++.- -+....+++|.
T Consensus 329 t~e-~Ae~~L~~-aDlVaiGR~~Ian-----Pdlv~ki~~G~ 363 (419)
T 3l5a_A 329 SPE-SALDALQH-ADMVGMSSPFVTE-----PDFVHKLAEQR 363 (419)
T ss_dssp SHH-HHHHHGGG-CSEEEESTHHHHC-----TTHHHHHHTTC
T ss_pred CHH-HHHHHHHh-CCcHHHHHHHHHC-----cHHHHHHHcCC
Confidence 221 23444444 9999998876642 23445566554
No 185
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=94.59 E-value=0.4 Score=45.00 Aligned_cols=140 Identities=16% Similarity=0.184 Sum_probs=80.3
Q ss_pred HHHHhhcCCcEEE-eCCC---C-CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHH
Q 012478 143 QLITQAVSIPVIG-DGDN---G-YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDA 217 (462)
Q Consensus 143 ~~I~ra~~iPVIa-D~Dt---G-yG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~A 217 (462)
+.+.+.+++||.+ |++. | |-+ ...+.++.++||++|.|-+. . ...|.+|..++++++.+.
T Consensus 46 ~~v~~~~~~~v~aqd~~~~~~ga~tG----ei~~~~~~~~Gad~Vll~~s---------e--r~l~~~e~~~~~~~a~~~ 110 (219)
T 2h6r_A 46 RMIVENVNIPVYAQHIDNINPGSHTG----HILAEAIKDCGCKGTLINHS---------E--KRMLLADIEAVINKCKNL 110 (219)
T ss_dssp HHHHHHCCSCBEESCCCSCCSBSCTT----CCCHHHHHHHTCCEEEESBT---------T--BCCBHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCcEEEEECChhhcCCccC----chHHHHHHHcCCCEEEECCc---------c--ccCCHHHHHHHHHHHHHC
Confidence 3444556899999 7652 2 211 11236777899999999332 1 234566776776666544
Q ss_pred HHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCC---------C-----HHHHHHHHHhCC-CCceee
Q 012478 218 RKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALA---------S-----KEEMKAFCEISP-LVPKMA 282 (462)
Q Consensus 218 r~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~---------s-----~eei~~i~~~v~-~vP~~~ 282 (462)
|-..++..-+.. | .+| ..+.|++.|.++... + .++..++.+.++ .+|+
T Consensus 111 ----Gl~~iv~v~~~~-------e-~~~---~~~~~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~~~~~~i-- 173 (219)
T 2h6r_A 111 ----GLETIVCTNNIN-------T-SKA---VAALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKEINKDVKV-- 173 (219)
T ss_dssp ----TCEEEEEESSSH-------H-HHH---HTTTCCSEEEECCCC--------------CSHHHHHHHHHHCTTCEE--
T ss_pred ----CCeEEEEeCCch-------H-HHH---HHhCCCCEEEEEeccccccCCCCccCCHHHHHHHHHHHHhccCCCeE--
Confidence 444555443322 1 223 345689999887533 1 234444455443 2333
Q ss_pred eeeecCCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012478 283 NMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316 (462)
Q Consensus 283 N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~a 316 (462)
+.++|-.+.=..+.+.+.|+.-++.|..++.+
T Consensus 174 --i~ggGI~~~~~~~~~~~~gaDgvlVGsAi~~~ 205 (219)
T 2h6r_A 174 --LCGAGISKGEDVKAALDLGAEGVLLASGVVKA 205 (219)
T ss_dssp --EECSSCCSHHHHHHHHTTTCCCEEESHHHHTC
T ss_pred --EEEeCcCcHHHHHHHhhCCCCEEEEcHHHhCc
Confidence 33334332223456788999999999887764
No 186
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=94.59 E-value=0.91 Score=45.47 Aligned_cols=158 Identities=13% Similarity=0.062 Sum_probs=90.3
Q ss_pred HHHHHHHHhCCcEEEec---cHHHHhhh----ccCCCCCCCCHHH----HHHHHHHHHhhc--CCcEEEeCCC------C
Q 012478 100 LSAKLVEKSGFSFCFTS---GFSISAAR----LALPDTGFISYGE----MVDQGQLITQAV--SIPVIGDGDN------G 160 (462)
Q Consensus 100 lSArl~e~aGfdaI~vS---G~avSas~----lG~PD~g~vsl~E----ml~~~~~I~ra~--~iPVIaD~Dt------G 160 (462)
-.|+.+.++|||+|=+- |+-+.-.. .-.-|.---+++. +++.++.|++++ +.||.+.+.- |
T Consensus 156 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g 235 (349)
T 3hgj_A 156 EGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGG 235 (349)
T ss_dssp HHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTS
T ss_pred HHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCC
Confidence 45788889999999876 33332110 0112321124543 355666777776 6899886543 3
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCCCC-CCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccH
Q 012478 161 YGNAMNVKRTVKGYIKAGFAGIILEDQV-SPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (462)
Q Consensus 161 yG~~~nv~rtVk~l~~AGaaGI~IEDq~-~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gl 239 (462)
+ +..+..+.++.++++|++.|++-... .+.. .....+-.. -+++.+|+..+ +..++.+++...
T Consensus 236 ~-~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~--~~~~~~~~~-~~~~~~ir~~~------~iPVi~~Ggi~t------ 299 (349)
T 3hgj_A 236 W-SLEDTLAFARRLKELGVDLLDCSSGGVVLRV--RIPLAPGFQ-VPFADAVRKRV------GLRTGAVGLITT------ 299 (349)
T ss_dssp C-CHHHHHHHHHHHHHTTCCEEEEECCCSCSSS--CCCCCTTTT-HHHHHHHHHHH------CCEEEECSSCCC------
T ss_pred C-CHHHHHHHHHHHHHcCCCEEEEecCCcCccc--ccCCCcccc-HHHHHHHHHHc------CceEEEECCCCC------
Confidence 2 45678888999999999999996432 1110 000001111 23455554332 234444444211
Q ss_pred HHHHHHHHHhHhcC-CcEEEecC--CCCHHHHHHHHHhCC
Q 012478 240 EESLRRSRAFADAG-ADVLFIDA--LASKEEMKAFCEISP 276 (462)
Q Consensus 240 deAI~RakAy~eAG-AD~Ifie~--~~s~eei~~i~~~v~ 276 (462)
.+.+..+.+.| ||+|.+-- +.+++..+++.+.+.
T Consensus 300 ---~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~l~ 336 (349)
T 3hgj_A 300 ---PEQAETLLQAGSADLVLLGRVLLRDPYFPLRAAKALG 336 (349)
T ss_dssp ---HHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHHHTT
T ss_pred ---HHHHHHHHHCCCceEEEecHHHHhCchHHHHHHHHCC
Confidence 23466677788 99998842 356677888887764
No 187
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=94.58 E-value=0.73 Score=46.86 Aligned_cols=100 Identities=10% Similarity=0.113 Sum_probs=61.5
Q ss_pred HHHHHhHhcCCcEEEecC---------CCCHHHHHHHHHhCC-CCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchH
Q 012478 244 RRSRAFADAGADVLFIDA---------LASKEEMKAFCEISP-LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSL 313 (462)
Q Consensus 244 ~RakAy~eAGAD~Ifie~---------~~s~eei~~i~~~v~-~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~l 313 (462)
+.|+...++|||+|.+.+ +.+.+.+.++.+.+. .+|++++ ||-.-..+..+.-.+|.+.|..+..+
T Consensus 229 e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~----GGI~~g~Dv~kaLalGA~aV~iGr~~ 304 (352)
T 3sgz_A 229 EDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMD----GGVRTGTDVLKALALGARCIFLGRPI 304 (352)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEE----SSCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEE----CCCCCHHHHHHHHHcCCCEEEECHHH
Confidence 458888999999999832 345677778877663 3565433 34322234555556899999999887
Q ss_pred HHHHH----HHHHHHHHHHHcCCCCCCCCCCCHHHHHHhcCcccHHHH
Q 012478 314 IGVSV----RAMQDALTAIKGGRIPSPGSMPSFQEIKETLGFNTYYEE 357 (462)
Q Consensus 314 l~aa~----~Am~~~l~~l~~g~~~~~~~~~s~~e~~~lvg~~~~~~~ 357 (462)
+.+.. ..+.+.++.|+++ ++....+.|.....++
T Consensus 305 l~~l~~~G~~gv~~~l~~l~~e----------l~~~m~~~G~~~i~el 342 (352)
T 3sgz_A 305 LWGLACKGEDGVKEVLDILTAE----------LHRCMTLSGCQSVAEI 342 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHTCSBGGGC
T ss_pred HHHHHhcCcHHHHHHHHHHHHH----------HHHHHHHhCCCcHHHH
Confidence 76532 3344555555432 3455555555554444
No 188
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=94.55 E-value=0.2 Score=50.60 Aligned_cols=132 Identities=11% Similarity=0.060 Sum_probs=89.5
Q ss_pred CcEEEeCCCC-CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEE
Q 012478 151 IPVIGDGDNG-YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA 229 (462)
Q Consensus 151 iPVIaD~DtG-yG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiA 229 (462)
+|+.+= -| .+++....+.++++.++|..+|+|- +|+. +.+. +++|++++++. |+++.|..
T Consensus 153 vp~~~~--~g~~~~~e~~~~~a~~~~~~Gf~~vKik-------~g~~------~~~~-~e~v~avr~a~---g~d~~l~v 213 (388)
T 2nql_A 153 FPAYVS--GLPERTLKARGELAKYWQDRGFNAFKFA-------TPVA------DDGP-AAEIANLRQVL---GPQAKIAA 213 (388)
T ss_dssp EEEEEE--CCCCSSHHHHHHHHHHHHHTTCCEEEEE-------GGGC------TTCH-HHHHHHHHHHH---CTTSEEEE
T ss_pred eEeeEE--eCCCCCHHHHHHHHHHHHHhCCCEEEEe-------CCCC------ChHH-HHHHHHHHHHh---CCCCEEEE
Confidence 666552 24 3577888888999999999999983 3431 1345 77888887764 56776653
Q ss_pred ecchhhcccHHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHh---cC
Q 012478 230 RTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE---LG 303 (462)
Q Consensus 230 RTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~---lG 303 (462)
|+.....++++++-++++.+.|.+. +|-+ .+.+.++++.+.++ +|+..+ +. ..+.+++++ .|
T Consensus 214 --Dan~~~~~~~a~~~~~~l~~~~i~~--iEqP~~~~d~~~~~~l~~~~~-iPI~~d-----E~--~~~~~~~~~~i~~~ 281 (388)
T 2nql_A 214 --DMHWNQTPERALELIAEMQPFDPWF--AEAPVWTEDIAGLEKVSKNTD-VPIAVG-----EE--WRTHWDMRARIERC 281 (388)
T ss_dssp --ECCSCSCHHHHHHHHHHHGGGCCSC--EECCSCTTCHHHHHHHHTSCC-SCEEEC-----TT--CCSHHHHHHHHTTS
T ss_pred --ECCCCCCHHHHHHHHHHHhhcCCCE--EECCCChhhHHHHHHHHhhCC-CCEEEe-----CC--cCCHHHHHHHHHcC
Confidence 6666678899999999999999875 4543 36778888888775 676533 22 235555443 45
Q ss_pred -CCEEeccchH
Q 012478 304 -FKLVAYPLSL 313 (462)
Q Consensus 304 -v~~V~yp~~l 313 (462)
++.|..-..-
T Consensus 282 ~~d~v~ik~~~ 292 (388)
T 2nql_A 282 RIAIVQPEMGH 292 (388)
T ss_dssp CCSEECCCHHH
T ss_pred CCCEEEecCCC
Confidence 7777765544
No 189
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=94.52 E-value=0.83 Score=44.91 Aligned_cols=183 Identities=13% Similarity=0.059 Sum_probs=103.7
Q ss_pred HHHHHHhCCCceE-ec--ccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEe
Q 012478 80 SLRQILELPGVHQ-GP--ACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGD 156 (462)
Q Consensus 80 ~LR~ll~~~~~iv-~p--~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD 156 (462)
+|.+++.-.-+++ .| |.-+.--|..+.++|.-.+..++ ...+.+++.+.++.+.+.++.|+.+.
T Consensus 7 ~~~~~l~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~-------------~~~s~~~l~~~i~~i~~~~~~p~~v~ 73 (328)
T 2gjl_A 7 RFTETFGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSAL-------------TQPSPEALAAEIARCRELTDRPFGVN 73 (328)
T ss_dssp HHHHHHTCSSSEEECCCTTTCSHHHHHHHHHTTSBCEEETT-------------TSSSHHHHHHHHHHHHHHCSSCCEEE
T ss_pred hHHHHhCCCCCEEECCCCCCCcHHHHHHHHHCCCeEEeCCC-------------CCCCHHHHHHHHHHHHHhcCCCeEEE
Confidence 4666665433443 33 66677777777888742222111 11246777777777766665564332
Q ss_pred CCCCCCC----HHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecc
Q 012478 157 GDNGYGN----AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTD 232 (462)
Q Consensus 157 ~DtGyG~----~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTD 232 (462)
. |.+ .....+.++.+.++|+++|++--. + | .+++++++. . +..|+...
T Consensus 74 l---~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g-------~-------p-~~~~~~l~~---~------gi~vi~~v- 125 (328)
T 2gjl_A 74 L---TLLPTQKPVPYAEYRAAIIEAGIRVVETAGN-------D-------P-GEHIAEFRR---H------GVKVIHKC- 125 (328)
T ss_dssp E---EECCCSSCCCHHHHHHHHHHTTCCEEEEEES-------C-------C-HHHHHHHHH---T------TCEEEEEE-
T ss_pred E---eccccccCccHHHHHHHHHhcCCCEEEEcCC-------C-------c-HHHHHHHHH---c------CCCEEeeC-
Confidence 1 111 112345677888899999998321 1 2 344544432 1 23444322
Q ss_pred hhhcccHHHHHHHHHHhHhcCCcEEEecCC-----------CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHh
Q 012478 233 SRQALSLEESLRRSRAFADAGADVLFIDAL-----------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE 301 (462)
Q Consensus 233 A~~~~gldeAI~RakAy~eAGAD~Ifie~~-----------~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~ 301 (462)
...+ .++...++|||.|.+.+. .+.+.+.++.+.+. +|+++ . ||-...-+..++.+
T Consensus 126 ----~t~~----~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~~-iPvia---a-GGI~~~~~v~~al~ 192 (328)
T 2gjl_A 126 ----TAVR----HALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRLR-VPIIA---S-GGFADGRGLVAALA 192 (328)
T ss_dssp ----SSHH----HHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTCC-SCEEE---E-SSCCSHHHHHHHHH
T ss_pred ----CCHH----HHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHhcC-CCEEE---E-CCCCCHHHHHHHHH
Confidence 1223 355678899999999643 23456777776654 56543 2 34321123455566
Q ss_pred cCCCEEeccchHHHH
Q 012478 302 LGFKLVAYPLSLIGV 316 (462)
Q Consensus 302 lGv~~V~yp~~ll~a 316 (462)
+|..-|..+..++..
T Consensus 193 ~GAdgV~vGs~~~~~ 207 (328)
T 2gjl_A 193 LGADAINMGTRFLAT 207 (328)
T ss_dssp HTCSEEEESHHHHTS
T ss_pred cCCCEEEECHHHHcC
Confidence 899999999887764
No 190
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=94.47 E-value=0.32 Score=50.28 Aligned_cols=98 Identities=11% Similarity=0.083 Sum_probs=59.3
Q ss_pred HHHHHHHHhC-CCceEecccCChHHHHHHHHhCCcEEEec-cHHHHhhhccCCCC--CCCCHHHHHHHHHHHHhhcCCcE
Q 012478 78 AKSLRQILEL-PGVHQGPACFDALSAKLVEKSGFSFCFTS-GFSISAARLALPDT--GFISYGEMVDQGQLITQAVSIPV 153 (462)
Q Consensus 78 a~~LR~ll~~-~~~iv~p~ayDalSArl~e~aGfdaI~vS-G~avSas~lG~PD~--g~vsl~Eml~~~~~I~ra~~iPV 153 (462)
.+.++++.+. +-++++.++.+.-.|+.++++|+|+|.++ +.+ +..+..+. ...+.-+.+..+...++..++||
T Consensus 173 ~e~I~~ik~~~~i~Vi~g~V~t~e~A~~a~~aGAD~I~vG~g~G---s~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPV 249 (400)
T 3ffs_A 173 IRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVGIGPG---SICTTRIVAGVGVPQITAIEKCSSVASKFGIPI 249 (400)
T ss_dssp HHHHHHHHTTCCCEEEEEEECSHHHHHHHHHTTCSEEEECC------------CCSCBCCCHHHHHHHHHHHHTTTTCCE
T ss_pred HHHHHHHHhcCCCeEEEeecCCHHHHHHHHHcCCCEEEEeCCCC---cCcccccccccchhHHHHHHHHHHHHHhcCCCE
Confidence 3455555554 44555568999999999999999999995 212 11111111 11333344444444445568999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012478 154 IGDGDNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 154 IaD~DtGyG~~~nv~rtVk~l~~AGaaGI~I 184 (462)
|+|.- ..+..++. ++.++||+||.+
T Consensus 250 IA~GG--I~~~~di~----kalalGAd~V~v 274 (400)
T 3ffs_A 250 IADGG--IRYSGDIG----KALAVGASSVMI 274 (400)
T ss_dssp EEESC--CCSHHHHH----HHHTTTCSEEEE
T ss_pred EecCC--CCCHHHHH----HHHHcCCCEEEE
Confidence 99943 33444444 555789999999
No 191
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=94.42 E-value=1.2 Score=44.86 Aligned_cols=151 Identities=13% Similarity=0.072 Sum_probs=84.0
Q ss_pred HHHHHHHHhCCcEEEec---cHHHHhhhccCCCCC------CCCHHH----HHHHHHHHHhhc--CCcEEEeCCC-CC--
Q 012478 100 LSAKLVEKSGFSFCFTS---GFSISAARLALPDTG------FISYGE----MVDQGQLITQAV--SIPVIGDGDN-GY-- 161 (462)
Q Consensus 100 lSArl~e~aGfdaI~vS---G~avSas~lG~PD~g------~vsl~E----ml~~~~~I~ra~--~iPVIaD~Dt-Gy-- 161 (462)
-.|+.+.++|||+|=+= |+-+. .+.-|-+. -=+++. +++.++.|.+++ +.||.+-+-- +|
T Consensus 147 ~AA~~a~~aGfDgVEih~ahGYLl~--qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~ 224 (343)
T 3kru_A 147 EAAKRANLAGYDVVEIHAAHGYLIH--EFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYME 224 (343)
T ss_dssp HHHHHHHHHTCSEEEEEECTTSHHH--HHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSST
T ss_pred HHHhhccccCCceEEEecccchhHH--HhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhc
Confidence 45788889999999886 44443 22333221 114442 355667777777 5899884432 11
Q ss_pred -C-CHHHHHHHHHHHHHhCccEEEe-CCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhccc
Q 012478 162 -G-NAMNVKRTVKGYIKAGFAGIIL-EDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS 238 (462)
Q Consensus 162 -G-~~~nv~rtVk~l~~AGaaGI~I-EDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~g 238 (462)
| +..+..+.++.++++ ++.|++ .....++..-...+ . .-+++.+|+.++ +..++.+++...
T Consensus 225 ~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~---~-~~~~~~~ir~~~------~iPVi~~Ggi~t----- 288 (343)
T 3kru_A 225 GGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPG---Y-QVKYAETIKKRC------NIKTSAVGLITT----- 288 (343)
T ss_dssp TSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTT---T-THHHHHHHHHHH------TCEEEEESSCCC-----
T ss_pred cCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCc---e-eehHHHHHHHhc------CcccceeeeeeH-----
Confidence 3 356888899999999 999999 33322210000011 1 123455554432 234555555322
Q ss_pred HHHHHHHHHHhHhcC-CcEEEec--CCCCHHHHHHHH
Q 012478 239 LEESLRRSRAFADAG-ADVLFID--ALASKEEMKAFC 272 (462)
Q Consensus 239 ldeAI~RakAy~eAG-AD~Ifie--~~~s~eei~~i~ 272 (462)
.+.+..+.+.| ||+|.+- .+.+++..+++.
T Consensus 289 ----~e~Ae~~l~~G~aD~V~iGR~~lanPdl~~k~~ 321 (343)
T 3kru_A 289 ----QELAEEILSNERADLVALGRELLRNPYWVLHTY 321 (343)
T ss_dssp ----HHHHHHHHHTTSCSEEEESHHHHHCTTHHHHTC
T ss_pred ----HHHHHHHHhchhhHHHHHHHHHhcCCeEEEEEe
Confidence 22456666777 9999873 233444444443
No 192
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=94.39 E-value=0.16 Score=50.04 Aligned_cols=114 Identities=17% Similarity=0.218 Sum_probs=71.0
Q ss_pred HHHHHHHhCCCceEec-ccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHh-hcC-CcEEE
Q 012478 79 KSLRQILELPGVHQGP-ACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQ-AVS-IPVIG 155 (462)
Q Consensus 79 ~~LR~ll~~~~~iv~p-~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~r-a~~-iPVIa 155 (462)
++-++|.++ +..++| +.-|...|+.++++|.++|.--+.-+- +-.|+ .+ .+..+.|.+ ..+ +|||+
T Consensus 115 ~aa~~L~k~-Gf~Vlpy~~~D~~~ak~l~~~G~~aVmPlg~pIG-sG~Gi-----~~----~~~L~~i~~~~~~~vPVI~ 183 (268)
T 2htm_A 115 KAAERLIEE-DFLVLPYMGPDLVLAKRLAALGTATVMPLAAPIG-SGWGV-----RT----RALLELFAREKASLPPVVV 183 (268)
T ss_dssp HHHHHHHHT-TCEECCEECSCHHHHHHHHHHTCSCBEEBSSSTT-TCCCS-----TT----HHHHHHHHHTTTTSSCBEE
T ss_pred HHHHHHHHC-CCEEeeccCCCHHHHHHHHhcCCCEEEecCccCc-CCccc-----CC----HHHHHHHHHhcCCCCeEEE
Confidence 345555554 577776 668899999999999999955232221 11222 22 223566666 567 99999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHH
Q 012478 156 DGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARK 219 (462)
Q Consensus 156 D~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~ 219 (462)
|.|.+.+.+++ ...+.||+||.+--... ..+ ++..+++.++.|++|.+
T Consensus 184 --~GGI~tpsDAa----~AmeLGAdgVlVgSAI~------~a~----dP~~ma~af~~Av~agr 231 (268)
T 2htm_A 184 --DAGLGLPSHAA----EVMELGLDAVLVNTAIA------EAQ----DPPAMAEAFRLAVEAGR 231 (268)
T ss_dssp --ESCCCSHHHHH----HHHHTTCCEEEESHHHH------TSS----SHHHHHHHHHHHHHHHH
T ss_pred --eCCCCCHHHHH----HHHHcCCCEEEEChHHh------CCC----CHHHHHHHHHHHHHHHH
Confidence 56888887776 45578999999844331 111 23455666666655543
No 193
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=94.38 E-value=0.2 Score=50.50 Aligned_cols=132 Identities=20% Similarity=0.284 Sum_probs=89.1
Q ss_pred CcEEEeCCCCC--CCH---HHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCe
Q 012478 151 IPVIGDGDNGY--GNA---MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDI 225 (462)
Q Consensus 151 iPVIaD~DtGy--G~~---~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~ 225 (462)
+|+.+= +|. +++ +...+.++++.++|..+|+| ++||. +.++-+++|++++++. |+++
T Consensus 124 vp~~~~--~g~~~~~~~~~e~~~~~a~~~~~~Gf~~vKi-------k~g~~------~~~~d~e~v~avR~a~---G~d~ 185 (382)
T 2gdq_A 124 IPVYAS--FQSYSDSPQWISRSVSNVEAQLKKGFEQIKV-------KIGGT------SFKEDVRHINALQHTA---GSSI 185 (382)
T ss_dssp EEEEEE--CCCBCSSTTHHHHHHHHHHHHHTTTCCEEEE-------ECSSS------CHHHHHHHHHHHHHHH---CTTS
T ss_pred eeEEEE--ecccCCCcccHHHHHHHHHHHHHcCCCEEEE-------cCCCC------CHHHHHHHHHHHHHhh---CCCC
Confidence 565542 232 566 77888888999999999999 24551 3567788888888774 5677
Q ss_pred EEEEecchhhcccHHHHHHHHHHhHhc-CCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHH---
Q 012478 226 VIVARTDSRQALSLEESLRRSRAFADA-GADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE--- 298 (462)
Q Consensus 226 vIiARTDA~~~~gldeAI~RakAy~eA-GAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~e--- 298 (462)
.|. .|+.....++++++-++++.+. |. .|+|-+ .+.+.++++.+.++ +|+..+ +. ..+.++
T Consensus 186 ~l~--vDan~~~~~~~a~~~~~~l~~~~~i--~~iEqP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~ 253 (382)
T 2gdq_A 186 TMI--LDANQSYDAAAAFKWERYFSEWTNI--GWLEEPLPFDQPQDYAMLRSRLS-VPVAGG-----EN--MKGPAQYVP 253 (382)
T ss_dssp EEE--EECTTCCCHHHHHTTHHHHTTCSCE--EEEECCSCSSCHHHHHHHHTTCS-SCEEEC-----TT--CCSHHHHHH
T ss_pred EEE--EECCCCCCHHHHHHHHHHHhhccCC--eEEECCCCcccHHHHHHHHhhCC-CCEEec-----CC--cCCHHHHHH
Confidence 665 3776677899999999999887 64 467754 36778888888765 676532 21 224444
Q ss_pred HHhcC-CCEEeccch
Q 012478 299 LEELG-FKLVAYPLS 312 (462)
Q Consensus 299 L~~lG-v~~V~yp~~ 312 (462)
+-+.| ++.|..-..
T Consensus 254 ~i~~~~~d~v~ik~~ 268 (382)
T 2gdq_A 254 LLSQRCLDIIQPDVM 268 (382)
T ss_dssp HHHTTCCSEECCCTT
T ss_pred HHHcCCCCEEecCcc
Confidence 44445 677766443
No 194
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=94.33 E-value=0.34 Score=48.95 Aligned_cols=122 Identities=18% Similarity=0.335 Sum_probs=85.1
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
++....+.++++.+.|..+++|- +||. +.++.+++|++++++. |+++.|. .|+.....++++
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik-------~g~~------~~~~~~e~v~avr~a~---g~~~~l~--vDan~~~~~~~a 226 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMK-------IGGA------PIEEDRMRIEAVLEEI---GKDAQLA--VDANGRFNLETG 226 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEE-------CSSS------CHHHHHHHHHHHHHHH---TTTCEEE--EECTTCCCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEc-------CCCC------CHHHHHHHHHHHHHhc---CCCCeEE--EECCCCCCHHHH
Confidence 67778888889999999999982 4551 3466788888888774 5676655 377677789999
Q ss_pred HHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHH---HHhcC-----CCEEeccc
Q 012478 243 LRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELG-----FKLVAYPL 311 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~e---L~~lG-----v~~V~yp~ 311 (462)
++-++++.+.|.+ |+|-+ .+.+.++++.+.++ +|+..+ +. ..+.++ +-+.| ++.|..-.
T Consensus 227 ~~~~~~l~~~~i~--~iEqP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~~~~~~~d~v~ik~ 296 (392)
T 1tzz_A 227 IAYAKMLRDYPLF--WYEEVGDPLDYALQAALAEFYP-GPMATG-----EN--LFSHQDARNLLRYGGMRPDRDWLQFDC 296 (392)
T ss_dssp HHHHHHHTTSCCS--EEECCSCTTCHHHHHHHTTTCC-SCEEEC-----TT--CCSHHHHHHHHHHSCCCTTTCEECCCT
T ss_pred HHHHHHHHHcCCC--eecCCCChhhHHHHHHHHhhCC-CCEEEC-----CC--CCCHHHHHHHHHcCCCccCCcEEEECc
Confidence 9999999998877 55553 36678888887765 676533 21 134444 44455 77777644
Q ss_pred h
Q 012478 312 S 312 (462)
Q Consensus 312 ~ 312 (462)
.
T Consensus 297 ~ 297 (392)
T 1tzz_A 297 A 297 (392)
T ss_dssp T
T ss_pred c
Confidence 3
No 195
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=94.28 E-value=0.25 Score=50.23 Aligned_cols=149 Identities=14% Similarity=0.119 Sum_probs=82.9
Q ss_pred HHHHHHHHHhCccEEEeCCCC-----------CCCCCCCCCCCcccC-HHHHHHHHHHHHHHHHhhCCCeEEEEecchhh
Q 012478 168 KRTVKGYIKAGFAGIILEDQV-----------SPKGCGHTRGRKVVS-REEAVMRIKAAVDARKESGSDIVIVARTDSRQ 235 (462)
Q Consensus 168 ~rtVk~l~~AGaaGI~IEDq~-----------~PKrCGH~~gk~Lvp-~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~ 235 (462)
.+++++..++|.+||.|-..- ..||...-+|- +-. ..-..+-|+|++++. |++ .|..|.-...
T Consensus 156 ~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGs-lenR~rf~~eiv~aVr~~v---g~~-~v~vRls~~~ 230 (362)
T 4ab4_A 156 RSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGS-LENRARLLLEVTDAAIEVW---GAQ-RVGVHLAPRA 230 (362)
T ss_dssp HHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSS-HHHHHHHHHHHHHHHHHHH---CGG-GEEEEECTTC
T ss_pred HHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCc-hhhHHHHHHHHHHHHHHhc---CCC-ceEEEeeccc
Confidence 344566678999999996652 12444333332 221 222344455555443 444 4455643321
Q ss_pred -------cccHHHHHHHHHHhHhcCCcEEEecCCCC-HHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcC-CCE
Q 012478 236 -------ALSLEESLRRSRAFADAGADVLFIDALAS-KEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELG-FKL 306 (462)
Q Consensus 236 -------~~gldeAI~RakAy~eAGAD~Ifie~~~s-~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lG-v~~ 306 (462)
....+++++-+++++++|+|.|-+.+..+ .+.++++.+.++ +|++.| ++-+| -..+++-+-| +..
T Consensus 231 ~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~~~-iPvi~~----Ggit~-e~a~~~l~~g~aD~ 304 (362)
T 4ab4_A 231 DAHDMGDADRAETFTYVARELGKRGIAFICSREREADDSIGPLIKEAFG-GPYIVN----ERFDK-ASANAALASGKADA 304 (362)
T ss_dssp CSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCCCTTCCHHHHHHHHC-SCEEEE----SSCCH-HHHHHHHHTTSCSE
T ss_pred cccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHCC-CCEEEe----CCCCH-HHHHHHHHcCCccE
Confidence 12367889999999999999998765321 134555666665 576654 23222 1234444445 899
Q ss_pred EeccchHHHHHHHHHHHHHHHHHcCC
Q 012478 307 VAYPLSLIGVSVRAMQDALTAIKGGR 332 (462)
Q Consensus 307 V~yp~~ll~aa~~Am~~~l~~l~~g~ 332 (462)
|.++-.++.-- +....+++|.
T Consensus 305 V~iGR~~lanP-----dl~~k~~~g~ 325 (362)
T 4ab4_A 305 VAFGVPFIANP-----DLPARLAADA 325 (362)
T ss_dssp EEESHHHHHCT-----THHHHHHTTC
T ss_pred EEECHHhHhCc-----HHHHHHHcCC
Confidence 98877555422 3445566653
No 196
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=94.25 E-value=0.26 Score=49.52 Aligned_cols=88 Identities=15% Similarity=0.178 Sum_probs=56.9
Q ss_pred HHHHHHHhCCcEEEec-cHHHHhhh-ccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCC---HHHHHHHHHHHH
Q 012478 101 SAKLVEKSGFSFCFTS-GFSISAAR-LALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGN---AMNVKRTVKGYI 175 (462)
Q Consensus 101 SArl~e~aGfdaI~vS-G~avSas~-lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~---~~nv~rtVk~l~ 175 (462)
.|+.++++|||.|=+- |.-..... -|+-..-.-..+-+.+.++.+.+.+++||++=+-.|+.+ ..+..+.++.++
T Consensus 75 aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~ 154 (350)
T 3b0p_A 75 AARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMA 154 (350)
T ss_dssp HHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHHHH
Confidence 4577778899999876 31111111 111111112345566677778777899999955555432 356788899999
Q ss_pred HhCccEEEeCCCC
Q 012478 176 KAGFAGIILEDQV 188 (462)
Q Consensus 176 ~AGaaGI~IEDq~ 188 (462)
++|+++|++.+..
T Consensus 155 ~aG~d~I~V~~r~ 167 (350)
T 3b0p_A 155 EAGVKVFVVHARS 167 (350)
T ss_dssp HTTCCEEEEECSC
T ss_pred HcCCCEEEEecCc
Confidence 9999999997653
No 197
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=94.22 E-value=0.71 Score=46.85 Aligned_cols=132 Identities=25% Similarity=0.256 Sum_probs=91.6
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHh-CccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEE
Q 012478 151 IPVIGDGDNGYGNAMNVKRTVKGYIKA-GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA 229 (462)
Q Consensus 151 iPVIaD~DtGyG~~~nv~rtVk~l~~A-GaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiA 229 (462)
+|+-+- .|+++++.+.+.++.+.+. |...+||- .|. -+.++-+++|+|++++. |+++.|
T Consensus 157 v~~y~s--~g~~~~e~~~~~a~~~~~~~G~~~~KlK-------vG~------~~~~~d~~~v~avR~a~---G~~~~l-- 216 (383)
T 3toy_A 157 IPAYDS--YGVLDARDDERTLRTACDEHGFRAIKSK-------GGH------GDLATDEAMIKGLRALL---GPDIAL-- 216 (383)
T ss_dssp EEEEEE--CSSCCHHHHHHHHHHHHHTSCCCEEEEE-------CCS------SCHHHHHHHHHHHHHHH---CTTSEE--
T ss_pred eEEeEe--cCCCCHHHHHHHHHHHHHccCCcEEEEe-------cCC------CCHHHHHHHHHHHHHHh---CCCCeE--
Confidence 565443 5677888888889999999 99999993 222 13566788998887774 567766
Q ss_pred ecchhhcccHHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHH---HhcC
Q 012478 230 RTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLEL---EELG 303 (462)
Q Consensus 230 RTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL---~~lG 303 (462)
+.|+......++|++.++++.+.|.+ |+|-+ .+.+.++++.+..+ +|+..+ .. ..+..++ -+.|
T Consensus 217 ~vDaN~~~~~~~A~~~~~~l~~~~i~--~iEeP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~ 286 (383)
T 3toy_A 217 MLDFNQSLDPAEATRRIARLADYDLT--WIEEPVPQENLSGHAAVRERSE-IPIQAG-----EN--WWFPRGFAEAIAAG 286 (383)
T ss_dssp EEECTTCSCHHHHHHHHHHHGGGCCS--EEECCSCTTCHHHHHHHHHHCS-SCEEEC-----TT--CCHHHHHHHHHHHT
T ss_pred EEeCCCCCCHHHHHHHHHHHHhhCCC--EEECCCCcchHHHHHHHHhhcC-CCEEeC-----CC--cCCHHHHHHHHHcC
Confidence 45777778899999999999998865 55543 26788889988875 676543 21 2344444 4445
Q ss_pred -CCEEeccch
Q 012478 304 -FKLVAYPLS 312 (462)
Q Consensus 304 -v~~V~yp~~ 312 (462)
++.+..-..
T Consensus 287 a~d~v~ik~~ 296 (383)
T 3toy_A 287 ASDFIMPDLM 296 (383)
T ss_dssp CCSEECCCTT
T ss_pred CCCEEEeCcc
Confidence 666655443
No 198
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=94.18 E-value=2.4 Score=41.10 Aligned_cols=138 Identities=14% Similarity=0.168 Sum_probs=89.0
Q ss_pred cCCcEEEeCCCCCCCHH-HHHHHHHHHH-HhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeE
Q 012478 149 VSIPVIGDGDNGYGNAM-NVKRTVKGYI-KAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIV 226 (462)
Q Consensus 149 ~~iPVIaD~DtGyG~~~-nv~rtVk~l~-~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~v 226 (462)
.+.+|+.|.=.| +.. .+...++.+. +.|++.|.+--. .| .+-|++++++. +...+
T Consensus 75 ~g~~VflDlK~~--DI~nTv~~~a~~~~~~lg~d~vTvh~~---------~G---------~~~l~~~~~~~---~~gv~ 131 (255)
T 3qw3_A 75 AGIPVVLDAKRG--DIADTADAYATSAFKHLNAHAITASPY---------MG---------SDSLQPFMRYP---DKAVF 131 (255)
T ss_dssp TTCCBEEEEEEC--CCHHHHHHHHHHHHTTSCCSEEEECCT---------TC---------HHHHHHHHTCT---TSEEE
T ss_pred CCCeEEEEeecC--CcHHHHHHHHHHHHHHcCCCEEEEccc---------CC---------HHHHHHHHHhh---CCceE
Confidence 479999999875 532 3445666765 699999999332 12 12455555542 34688
Q ss_pred EEEecchhhc-----c-----c-HHHHHHHHHH-hHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCC-C
Q 012478 227 IVARTDSRQA-----L-----S-LEESLRRSRA-FADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTP-I 293 (462)
Q Consensus 227 IiARTDA~~~-----~-----g-ldeAI~RakA-y~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP-~ 293 (462)
|.++|..... . . .+..+++++. +.++|.|.+++.+ +..+|++.+.+..+..++ +++ |-.+ .
T Consensus 132 vL~~tS~~~~~~~q~~~~~~~~~~~~V~~~a~~~~~~~g~~GvV~~a-t~~~e~~~ir~~~~~~~~---l~P--GIg~qg 205 (255)
T 3qw3_A 132 VLCKTSNKGSNDLQCLRVGDRYLYEAVAERAEGPWNVNGNVGLVVGA-TDPVALARVRARAPTLWF---LVP--GIGAQG 205 (255)
T ss_dssp EEEECCSGGGGTTTTSEETTEEHHHHHHHHHHTGGGGGSCEEEEECS-SCHHHHHHHHHHCSSCCE---EEC--CC----
T ss_pred EEEeCCCccHHHHHhcccCCCCHHHHHHHHHHHHhhhhCCeEEEECC-CCHHHHHHHHHHCCCCeE---EEC--CcCCCC
Confidence 9999987431 1 1 3677788888 8889999999865 356788888887764322 333 3112 2
Q ss_pred CCHHHHHhcCCC------EEeccchHHH
Q 012478 294 LNPLELEELGFK------LVAYPLSLIG 315 (462)
Q Consensus 294 ls~~eL~~lGv~------~V~yp~~ll~ 315 (462)
-++++..+.|.. +++.+-..+.
T Consensus 206 ~tp~~a~~~G~d~~~~~~livvGR~I~~ 233 (255)
T 3qw3_A 206 GSLKASLDAGLRADGSGMLINVSRGLAR 233 (255)
T ss_dssp -CHHHHHHHHCCTTSCCEEEEESHHHHT
T ss_pred CCHHHHHHcCCCcccCeeEEEeChhhcC
Confidence 378888888887 3666655553
No 199
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=94.18 E-value=0.5 Score=48.18 Aligned_cols=137 Identities=18% Similarity=0.086 Sum_probs=80.1
Q ss_pred HHHHHHHHH-HhCccEEEeCCCCC--------C---CC-CCCCCCCcccC-HHHHHHHHHHHHHHHHhhCCCeEEEEecc
Q 012478 167 VKRTVKGYI-KAGFAGIILEDQVS--------P---KG-CGHTRGRKVVS-REEAVMRIKAAVDARKESGSDIVIVARTD 232 (462)
Q Consensus 167 v~rtVk~l~-~AGaaGI~IEDq~~--------P---Kr-CGH~~gk~Lvp-~ee~~~kI~AA~~Ar~~~g~d~vIiARTD 232 (462)
..+.++... ++|.+||.|-.... | || ...-+|..+-. ..-..+.|+|++++. |.+. |.-|..
T Consensus 176 f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~av---g~~~-v~vRis 251 (379)
T 3aty_A 176 FVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAV---GSDR-VGLRIS 251 (379)
T ss_dssp HHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHH---CGGG-EEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhc---CCCe-EEEEEC
Confidence 345667778 89999999965320 1 23 22223312211 223444555555443 4453 555643
Q ss_pred hh-------hcccHHHHHHHHHHhHhcCCcEEEecCC-------CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHH
Q 012478 233 SR-------QALSLEESLRRSRAFADAGADVLFIDAL-------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE 298 (462)
Q Consensus 233 A~-------~~~gldeAI~RakAy~eAGAD~Ifie~~-------~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~e 298 (462)
.. .....+++++-+++++++|+|.|-+... +. + ++++.+.++ +|++.| ++-+| -..++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~-~-~~~ir~~~~-iPvi~~----G~it~-~~a~~ 323 (379)
T 3aty_A 252 PLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGD-V-VAWVRGSYS-GVKISN----LRYDF-EEADQ 323 (379)
T ss_dssp TTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSCCCCC-H-HHHHHTTCC-SCEEEE----SSCCH-HHHHH
T ss_pred cccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCCccH-H-HHHHHHHCC-CcEEEE----CCCCH-HHHHH
Confidence 32 1235788999999999999999987652 22 5 777877775 676644 23221 12344
Q ss_pred HHhcC-CCEEeccchHHH
Q 012478 299 LEELG-FKLVAYPLSLIG 315 (462)
Q Consensus 299 L~~lG-v~~V~yp~~ll~ 315 (462)
+-+.| +..|.++-.++.
T Consensus 324 ~l~~g~aD~V~igR~~l~ 341 (379)
T 3aty_A 324 QIREGKVDAVAFGAKFIA 341 (379)
T ss_dssp HHHTTSCSEEEESHHHHH
T ss_pred HHHcCCCeEEEecHHHHh
Confidence 44456 899988876554
No 200
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=94.15 E-value=0.91 Score=44.50 Aligned_cols=188 Identities=10% Similarity=0.082 Sum_probs=109.0
Q ss_pred HHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccE
Q 012478 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAG 181 (462)
Q Consensus 102 Arl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaG 181 (462)
++.++++|++.|-++++.. .-..|-.+ ...++ ++.+.+..++|+.+=.+ + .+.+++.+++|+..
T Consensus 36 ~~~L~~~Gv~~IE~g~~~~---~~~~~~~~--d~~~~---~~~~~~~~~~~~~~l~~----~----~~~i~~a~~aG~~~ 99 (302)
T 2ftp_A 36 VDDLSAAGLDYIEVGSFVS---PKWVPQMA--GSAEV---FAGIRQRPGVTYAALAP----N----LKGFEAALESGVKE 99 (302)
T ss_dssp HHHHHHTTCSEEEEEECSC---TTTCGGGT--THHHH---HHHSCCCTTSEEEEECC----S----HHHHHHHHHTTCCE
T ss_pred HHHHHHcCcCEEEECCCcC---cccccccc--CHHHH---HHHhhhcCCCEEEEEeC----C----HHHHHHHHhCCcCE
Confidence 5677889999999886321 11222221 23333 44555445677766542 3 34566777899999
Q ss_pred EEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEe---c---chhhcccHHHHHHHHHHhHhcCCc
Q 012478 182 IILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVAR---T---DSRQALSLEESLRRSRAFADAGAD 255 (462)
Q Consensus 182 I~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiAR---T---DA~~~~gldeAI~RakAy~eAGAD 255 (462)
|+|-+..++ -|...+-=.+.+|.+++++.+++..++.| ..|.+- + ........+++++-++++.++|||
T Consensus 100 v~i~~~~s~---~~~~~~~~~s~ee~l~~~~~~v~~a~~~G--~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d 174 (302)
T 2ftp_A 100 VAVFAAASE---AFSQRNINCSIKDSLERFVPVLEAARQHQ--VRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCY 174 (302)
T ss_dssp EEEEEESCH---HHHHHHHSSCHHHHHHHHHHHHHHHHHTT--CEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCS
T ss_pred EEEEEecCH---HHHHHHhCCCHHHHHHHHHHHHHHHHHCC--CeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCC
Confidence 999776532 01100001478999999999988887655 333211 1 001124678999999999999999
Q ss_pred EEEec---CCCCHHHHHHHHHhCCC-Cc-eeeeeeecCCCCCCCCH---HHHHhcCCCEEeccch
Q 012478 256 VLFID---ALASKEEMKAFCEISPL-VP-KMANMLEGGGKTPILNP---LELEELGFKLVAYPLS 312 (462)
Q Consensus 256 ~Ifie---~~~s~eei~~i~~~v~~-vP-~~~N~l~~~g~tP~ls~---~eL~~lGv~~V~yp~~ 312 (462)
.|.+. |..+++++.++.+.+.. +| .++. +.+.. +..+.. ..--+.|++.|-....
T Consensus 175 ~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~l~-~H~Hn-~~Gla~An~laAv~aGa~~vd~tv~ 237 (302)
T 2ftp_A 175 EVSLGDTIGVGTAGATRRLIEAVASEVPRERLA-GHFHD-TYGQALANIYASLLEGIAVFDSSVA 237 (302)
T ss_dssp EEEEEESSSCCCHHHHHHHHHHHTTTSCGGGEE-EEEBC-TTSCHHHHHHHHHHTTCCEEEEBGG
T ss_pred EEEEeCCCCCcCHHHHHHHHHHHHHhCCCCeEE-EEeCC-CccHHHHHHHHHHHhCCCEEEeccc
Confidence 99874 45667777666654321 22 2332 22211 122322 3334567777755444
No 201
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=94.11 E-value=4.7 Score=39.40 Aligned_cols=177 Identities=16% Similarity=0.183 Sum_probs=104.2
Q ss_pred cccCChHHHHHHHHhCCcEEEecc-HHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeC-----CCCCCCH--H
Q 012478 94 PACFDALSAKLVEKSGFSFCFTSG-FSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDG-----DNGYGNA--M 165 (462)
Q Consensus 94 p~ayDalSArl~e~aGfdaI~vSG-~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~-----DtGyG~~--~ 165 (462)
.+|.+.-+|..+++.|.+-|=+-+ +. .| |+.|--.++ +.+.+.+++||.+=+ ||=|.+. .
T Consensus 6 vc~~s~~~a~~A~~~GAdRIELc~~L~-----~G----GlTPS~g~i---~~~~~~~~ipv~vMIRPR~GdF~Ys~~E~~ 73 (256)
T 1twd_A 6 ICCYSMECALTAQQNGADRVELCAAPK-----EG----GLTPSLGVL---KSVRQRVTIPVHPIIRPRGGDFCYSDGEFA 73 (256)
T ss_dssp EEESSHHHHHHHHHTTCSEEEECBCGG-----GT----CBCCCHHHH---HHHHHHCCSCEEEBCCSSSSCSCCCHHHHH
T ss_pred EEeCCHHHHHHHHHcCCCEEEEcCCcc-----cC----CCCCCHHHH---HHHHHHcCCceEEEECCCCCCCcCCHHHHH
Confidence 478899999999999999876654 22 12 222222222 333456789987643 4446643 2
Q ss_pred HHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEe-cchhhcccHHHHHH
Q 012478 166 NVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVAR-TDSRQALSLEESLR 244 (462)
Q Consensus 166 nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiAR-TDA~~~~gldeAI~ 244 (462)
...+-++.+.++|++||.+ +-.. ..|+ ++.+ +++..+++...+ -+..=| -|. ..+..+|++
T Consensus 74 ~M~~Di~~~~~~GadGvV~-G~Lt--~dg~------iD~~----~~~~Li~~a~~~---~vTFHRAfD~--~~d~~~ale 135 (256)
T 1twd_A 74 AILEDVRTVRELGFPGLVT-GVLD--VDGN------VDMP----RMEKIMAAAGPL---AVTFHRAFDM--CANPLYTLN 135 (256)
T ss_dssp HHHHHHHHHHHTTCSEEEE-CCBC--TTSS------BCHH----HHHHHHHHHTTS---EEEECGGGGG--CSCHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEE-eeEC--CCCC------cCHH----HHHHHHHHhCCC---cEEEECchhc--cCCHHHHHH
Confidence 4446699999999999998 2211 1233 4443 333333333211 133333 121 235567766
Q ss_pred HHHHhHhcCCcEEEecCC-----CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEe
Q 012478 245 RSRAFADAGADVLFIDAL-----ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVA 308 (462)
Q Consensus 245 RakAy~eAGAD~Ifie~~-----~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~ 308 (462)
... +.|.|-|+-.+- ...+.++++.+... -+.++.++|-++ -...+|.+.|++-+-
T Consensus 136 ~L~---~lG~~rILTSG~~~~a~~g~~~L~~Lv~~a~----~i~Im~GgGv~~-~Ni~~l~~tGv~e~H 196 (256)
T 1twd_A 136 NLA---ELGIARVLTSGQKSDALQGLSKIMELIAHRD----APIIMAGAGVRA-ENLHHFLDAGVLEVH 196 (256)
T ss_dssp HHH---HHTCCEEEECTTSSSTTTTHHHHHHHHTSSS----CCEEEEESSCCT-TTHHHHHHHTCSEEE
T ss_pred HHH---HcCCCEEECCCCCCCHHHHHHHHHHHHHhhC----CcEEEecCCcCH-HHHHHHHHcCCCeEe
Confidence 655 459999997642 34567777776432 245677767654 366777788887665
No 202
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=94.10 E-value=1.1 Score=46.30 Aligned_cols=137 Identities=9% Similarity=0.109 Sum_probs=89.2
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCCCC-CCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccH
Q 012478 161 YGNAMNVKRTVKGYIKAGFAGIILEDQV-SPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (462)
Q Consensus 161 yG~~~nv~rtVk~l~~AGaaGI~IEDq~-~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gl 239 (462)
+.+++.+.+.++++.+.|..++||--.. ..++-|+... .-+.++-+++|+|++++. |+++.|.. |+......
T Consensus 144 ~~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~--~~~~~~d~e~v~avR~av---G~d~~L~v--Dan~~~t~ 216 (433)
T 3rcy_A 144 WTSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPA--MTDISLSVEFCRKIRAAV---GDKADLLF--GTHGQFTT 216 (433)
T ss_dssp TTCHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCC--HHHHHHHHHHHHHHHHHH---TTSSEEEE--CCCSCBCH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcc--hhhHHHHHHHHHHHHHHh---CCCCeEEE--eCCCCCCH
Confidence 4678889999999999999999994221 0011122110 113456678888887774 56776654 66667789
Q ss_pred HHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHH---HHHhcC-CCEEeccch
Q 012478 240 EESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPL---ELEELG-FKLVAYPLS 312 (462)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~---eL~~lG-v~~V~yp~~ 312 (462)
++|++-++++++.|.+. +|-+ .+.+.++++.+.++ +|+.++ +. ..+.. ++-+.| +..|..-..
T Consensus 217 ~~A~~~~~~Le~~~i~~--iEeP~~~~~~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~l~~g~~D~v~~d~~ 286 (433)
T 3rcy_A 217 AGAIRLGQAIEPYSPLW--YEEPVPPDNVGAMAQVARAVR-IPVATG-----ER--LTTKAEFAPVLREGAAAILQPALG 286 (433)
T ss_dssp HHHHHHHHHHGGGCCSE--EECCSCTTCHHHHHHHHHHSS-SCEEEC-----TT--CCSHHHHHHHHHTTCCSEECCCHH
T ss_pred HHHHHHHHHhhhcCCCE--EECCCChhhHHHHHHHHhccC-CCEEec-----CC--CCCHHHHHHHHHcCCCCEEEeCch
Confidence 99999999999998764 4543 26788999988875 676532 21 23444 444556 666655444
Q ss_pred HH
Q 012478 313 LI 314 (462)
Q Consensus 313 ll 314 (462)
-.
T Consensus 287 ~~ 288 (433)
T 3rcy_A 287 RA 288 (433)
T ss_dssp HH
T ss_pred hc
Confidence 33
No 203
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=94.08 E-value=0.22 Score=47.31 Aligned_cols=87 Identities=17% Similarity=0.162 Sum_probs=59.1
Q ss_pred HHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCC---CCCCHHHHHHHHHHHHhhcCCcEEEe
Q 012478 80 SLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDT---GFISYGEMVDQGQLITQAVSIPVIGD 156 (462)
Q Consensus 80 ~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~---g~vsl~Eml~~~~~I~ra~~iPVIaD 156 (462)
.+-+..++.+..+++++++.--|+.++++|+|.|.++- .|+.+. ...++ +.++++++. ++|||+.
T Consensus 120 ~~i~~~~~~g~~v~~~v~t~eea~~a~~~Gad~Ig~~~-------~g~t~~~~~~~~~~----~li~~l~~~-~ipvIA~ 187 (229)
T 3q58_A 120 SLLTRIRLHGLLAMADCSTVNEGISCHQKGIEFIGTTL-------SGYTGPITPVEPDL----AMVTQLSHA-GCRVIAE 187 (229)
T ss_dssp HHHHHHHHTTCEEEEECSSHHHHHHHHHTTCSEEECTT-------TTSSSSCCCSSCCH----HHHHHHHTT-TCCEEEE
T ss_pred HHHHHHHHCCCEEEEecCCHHHHHHHHhCCCCEEEecC-------ccCCCCCcCCCCCH----HHHHHHHHc-CCCEEEE
Confidence 34444444578899999999999999999999997542 122211 11233 445566666 8999987
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012478 157 GDNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 157 ~DtGyG~~~nv~rtVk~l~~AGaaGI~I 184 (462)
. |..++.++. ++.++||+||.+
T Consensus 188 G--GI~t~~d~~----~~~~~GadgV~V 209 (229)
T 3q58_A 188 G--RYNTPALAA----NAIEHGAWAVTV 209 (229)
T ss_dssp S--SCCSHHHHH----HHHHTTCSEEEE
T ss_pred C--CCCCHHHHH----HHHHcCCCEEEE
Confidence 3 555665554 556789999998
No 204
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=94.06 E-value=3.5 Score=37.77 Aligned_cols=132 Identities=16% Similarity=0.149 Sum_probs=80.2
Q ss_pred CCHHHHHHHHHHHHhhcC--CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHH
Q 012478 133 ISYGEMVDQGQLITQAVS--IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMR 210 (462)
Q Consensus 133 vsl~Eml~~~~~I~ra~~--iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~k 210 (462)
++.+++...++.+..... .+++++ | .+..+.++|+++||+.... .+.+ .
T Consensus 53 ~~~~~~~~~~~~l~~~~~~~~~l~v~-~-----------~~~~a~~~gad~v~l~~~~-------------~~~~----~ 103 (221)
T 1yad_A 53 KSAADILKLLDLIFEGGIDKRKLVMN-G-----------RVDIALFSTIHRVQLPSGS-------------FSPK----Q 103 (221)
T ss_dssp SCHHHHHHHHHHHHHTTCCGGGEEEE-S-----------CHHHHHTTTCCEEEECTTS-------------CCHH----H
T ss_pred CCHHHHHHHHHHHHHhcCcCCeEEEe-C-----------hHHHHHHcCCCEEEeCCCc-------------cCHH----H
Confidence 788888888888866421 257776 1 1255678999999995431 1222 2
Q ss_pred HHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCC-----------CCHHHHHHHHHhCCCCc
Q 012478 211 IKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL-----------ASKEEMKAFCEISPLVP 279 (462)
Q Consensus 211 I~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~-----------~s~eei~~i~~~v~~vP 279 (462)
++.. . ++..+-..+ ...+ .++.+.++|||.|++..+ ...+.++++.+.+. +|
T Consensus 104 ~~~~------~-~~~~ig~sv-----~t~~----~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~~-~p 166 (221)
T 1yad_A 104 IRAR------F-PHLHIGRSV-----HSLE----EAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRIS-IP 166 (221)
T ss_dssp HHHH------C-TTCEEEEEE-----CSHH----HHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHCC-SC
T ss_pred HHHH------C-CCCEEEEEc-----CCHH----HHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhCC-CC
Confidence 2211 1 244444332 1233 355667899999988543 12356666666553 55
Q ss_pred eeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012478 280 KMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 280 ~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
+. ..||-++ -+..++.+.|+..|..+..++.
T Consensus 167 vi----a~GGI~~-~nv~~~~~~Ga~gv~vgs~i~~ 197 (221)
T 1yad_A 167 VI----AIGGMTP-DRLRDVKQAGADGIAVMSGIFS 197 (221)
T ss_dssp EE----EESSCCG-GGHHHHHHTTCSEEEESHHHHT
T ss_pred EE----EECCCCH-HHHHHHHHcCCCEEEEhHHhhC
Confidence 43 2245443 3678888899999999988774
No 205
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=94.06 E-value=2.1 Score=42.68 Aligned_cols=130 Identities=20% Similarity=0.257 Sum_probs=89.2
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccH
Q 012478 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (462)
Q Consensus 160 GyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gl 239 (462)
|+++++...+.++.+.+.|...+||- .|. +.++-+++|+|++++. |+++.+.. |+......
T Consensus 136 ~~~~~~~~~~~a~~~~~~G~~~~K~K-------~g~-------~~~~d~~~v~avR~a~---g~~~~l~v--Dan~~~~~ 196 (354)
T 3jva_A 136 GIDEPNVMAQKAVEKVKLGFDTLKIK-------VGT-------GIEADIARVKAIREAV---GFDIKLRL--DANQAWTP 196 (354)
T ss_dssp CSCCHHHHHHHHHHHHHTTCSEEEEE-------CCS-------CHHHHHHHHHHHHHHH---CTTSEEEE--ECTTCSCH
T ss_pred CCCCHHHHHHHHHHHHHhCCCeEEEE-------eCC-------CHHHHHHHHHHHHHHc---CCCCeEEE--ECCCCCCH
Confidence 56788888888999999999999993 232 1256678888888774 56776643 66667789
Q ss_pred HHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHh---c-CCCEEeccch
Q 012478 240 EESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE---L-GFKLVAYPLS 312 (462)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~---l-Gv~~V~yp~~ 312 (462)
++|++.++++.+.| ..|+|-+ .+.+.++++.+..+ +|+.++ +. ..+..++.+ . +++.|..-..
T Consensus 197 ~~a~~~~~~L~~~~--i~~iEqP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~l~~~~~d~v~~k~~ 266 (354)
T 3jva_A 197 KDAVKAIQALADYQ--IELVEQPVKRRDLEGLKYVTSQVN-TTIMAD-----ES--CFDAQDALELVKKGTVDVINIKLM 266 (354)
T ss_dssp HHHHHHHHHTTTSC--EEEEECCSCTTCHHHHHHHHHHCS-SEEEES-----TT--CCSHHHHHHHHHHTCCSEEEECHH
T ss_pred HHHHHHHHHHHhcC--CCEEECCCChhhHHHHHHHHHhCC-CCEEEc-----CC--cCCHHHHHHHHHcCCCCEEEECch
Confidence 99999999998865 5566654 25678888888875 676543 21 235555433 3 4777766554
Q ss_pred HHHHHH
Q 012478 313 LIGVSV 318 (462)
Q Consensus 313 ll~aa~ 318 (462)
-..-..
T Consensus 267 ~~GGit 272 (354)
T 3jva_A 267 KCGGIH 272 (354)
T ss_dssp HHTSHH
T ss_pred hcCCHH
Confidence 443333
No 206
>1dqu_A Isocitrate lyase; beta barrel; 2.80A {Emericella nidulans} SCOP: c.1.12.7
Probab=94.05 E-value=0.2 Score=53.77 Aligned_cols=87 Identities=18% Similarity=0.216 Sum_probs=69.1
Q ss_pred ccHHHHHHHHHHhHhcCCcEEEecCC-CCHHHHHHHHHh----CCCCceeeeeeecCCCCCCCC-------------HHH
Q 012478 237 LSLEESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEI----SPLVPKMANMLEGGGKTPILN-------------PLE 298 (462)
Q Consensus 237 ~gldeAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~----v~~vP~~~N~l~~~g~tP~ls-------------~~e 298 (462)
.+++.+|.|+.+|+ -+||+|++|.- ++.+++++|++. +|..-+..|. +|.+. ..|
T Consensus 373 ~g~~~ai~r~~a~a-p~aDliW~Et~~P~~~~a~~fa~~i~~~~P~~~LaYN~------SPSFnW~~~~~d~~~~~f~~~ 445 (538)
T 1dqu_A 373 GGTQCAINRAVAYA-PFADLIWMESKLPDYKQAKEFADGVHAVWPEQKLAYNL------SPSFNWKKAMPRDEQETYIKR 445 (538)
T ss_dssp CSHHHHHHHHHHHT-TSCSEEECCCSSCCHHHHHHHHHHHHHHCTTCEEEEEC------CSSSCGGGTSCHHHHHSHHHH
T ss_pred CchHHHHHHhcccC-cccceEEeccCCCCHHHHHHHHHHHHHhCCCceEEecC------CcchhhhhhCCHHHHHHHHHH
Confidence 57899999999986 49999999965 888888888864 5554445554 34332 278
Q ss_pred HHhcCCCEEeccchHHHHHHHHHHHHHHHHHc
Q 012478 299 LEELGFKLVAYPLSLIGVSVRAMQDALTAIKG 330 (462)
Q Consensus 299 L~~lGv~~V~yp~~ll~aa~~Am~~~l~~l~~ 330 (462)
|.++||+.-.+.+..+.....+|.+..+.+++
T Consensus 446 l~~~G~~~qfItLag~H~~~~~~~~la~~~~~ 477 (538)
T 1dqu_A 446 LGALGYAWQFITLAGLHTTALISDTFAKAYAK 477 (538)
T ss_dssp HHHHTEEEEEETTHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCceEEEEehhhhhhhhHHHHHHHHHHHH
Confidence 99999999999999999998899888888865
No 207
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=94.05 E-value=0.55 Score=47.30 Aligned_cols=137 Identities=15% Similarity=0.087 Sum_probs=80.2
Q ss_pred HHHHHHHHHhCccEEEeCCC-------C-CC---CCCCCCCCCcccCH-HHHHHHHHHHHHHHHhhCCCeEEEEecchh-
Q 012478 168 KRTVKGYIKAGFAGIILEDQ-------V-SP---KGCGHTRGRKVVSR-EEAVMRIKAAVDARKESGSDIVIVARTDSR- 234 (462)
Q Consensus 168 ~rtVk~l~~AGaaGI~IEDq-------~-~P---KrCGH~~gk~Lvp~-ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~- 234 (462)
.+.++...++|++||.|-.. - .| +|...-+| .+-.. .-..+-|+|++++ .|++|.|..|....
T Consensus 146 ~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGG-slenR~rf~~eiv~aVr~a---vg~d~pv~vRls~~~ 221 (343)
T 3kru_A 146 GEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGN-SIENRARFLIEVIDEVRKN---WPENKPIFVRVSADD 221 (343)
T ss_dssp HHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSS-SHHHHTHHHHHHHHHHHHT---SCTTSCEEEEEECCC
T ss_pred HHHHhhccccCCceEEEecccchhHHHhhcccccccchhhcc-chHhHHHHHHHHHHHHHhc---CCccCCeEEEeechh
Confidence 34456677899999999732 1 12 33333333 12111 2234444444444 36688777775542
Q ss_pred ---hcccHHHHHHHHHHhHhcCCcEEEec-CC-----------CCHHHHHHHHHhCCCCceeeeeeecCCC-CCCCCHHH
Q 012478 235 ---QALSLEESLRRSRAFADAGADVLFID-AL-----------ASKEEMKAFCEISPLVPKMANMLEGGGK-TPILNPLE 298 (462)
Q Consensus 235 ---~~~gldeAI~RakAy~eAGAD~Ifie-~~-----------~s~eei~~i~~~v~~vP~~~N~l~~~g~-tP~ls~~e 298 (462)
....++++++-++.++++ +|.|-+. +- ...+.++++.+.++ +|++.| ++- +| -..++
T Consensus 222 ~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~-iPVi~~----Ggi~t~-e~Ae~ 294 (343)
T 3kru_A 222 YMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCN-IKTSAV----GLITTQ-ELAEE 294 (343)
T ss_dssp SSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHT-CEEEEE----SSCCCH-HHHHH
T ss_pred hhccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcC-ccccee----eeeeHH-HHHHH
Confidence 123579999999999999 9999873 21 13456677777765 676644 232 11 12344
Q ss_pred HHhcC-CCEEeccchHHH
Q 012478 299 LEELG-FKLVAYPLSLIG 315 (462)
Q Consensus 299 L~~lG-v~~V~yp~~ll~ 315 (462)
+-+-| +..|.++-.++.
T Consensus 295 ~l~~G~aD~V~iGR~~la 312 (343)
T 3kru_A 295 ILSNERADLVALGRELLR 312 (343)
T ss_dssp HHHTTSCSEEEESHHHHH
T ss_pred HHhchhhHHHHHHHHHhc
Confidence 44556 899988765543
No 208
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=94.05 E-value=1.1 Score=46.16 Aligned_cols=140 Identities=19% Similarity=0.210 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHhCccEEEeCCCC-----------CCCCCCCCCCCcccC-HHHHHHHHHHHHHHHHhhCCCeEEEEecc
Q 012478 165 MNVKRTVKGYIKAGFAGIILEDQV-----------SPKGCGHTRGRKVVS-REEAVMRIKAAVDARKESGSDIVIVARTD 232 (462)
Q Consensus 165 ~nv~rtVk~l~~AGaaGI~IEDq~-----------~PKrCGH~~gk~Lvp-~ee~~~kI~AA~~Ar~~~g~d~vIiARTD 232 (462)
....++++..+++|++||.|--.- ..||...-+|- +-. ..-..+-|++++++. |.+ .|..|.-
T Consensus 171 ~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGs-lenR~rf~~Eiv~aVr~av---g~~-~V~vRls 245 (402)
T 2hsa_B 171 EDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGS-LANRCKFITQVVQAVVSAI---GAD-RVGVRVS 245 (402)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSS-HHHHHHHHHHHHHHHHHHH---CGG-GEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcC-hhhhhHHHHHHHHHHHHHh---CCC-cEEEEec
Confidence 355677788889999999996541 12343333332 211 222344455555443 334 3444632
Q ss_pred hh-------hcccHHHHHHHHHHhHhcC------CcEEEecCC--------C---------CHHHHHHHHHhCCCCceee
Q 012478 233 SR-------QALSLEESLRRSRAFADAG------ADVLFIDAL--------A---------SKEEMKAFCEISPLVPKMA 282 (462)
Q Consensus 233 A~-------~~~gldeAI~RakAy~eAG------AD~Ifie~~--------~---------s~eei~~i~~~v~~vP~~~ 282 (462)
.. ....++++++-+++++++| +|.|-+..- + ..+.++++.+.++ +|++.
T Consensus 246 ~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~-iPvi~ 324 (402)
T 2hsa_B 246 PAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQ-GTFIC 324 (402)
T ss_dssp SSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCS-SCEEE
T ss_pred cccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCC-CCEEE
Confidence 21 1234688999999999999 999987431 1 1133556666665 57665
Q ss_pred eeeecCCCCCCCCHHHHHhcC-CCEEeccchHHH
Q 012478 283 NMLEGGGKTPILNPLELEELG-FKLVAYPLSLIG 315 (462)
Q Consensus 283 N~l~~~g~tP~ls~~eL~~lG-v~~V~yp~~ll~ 315 (462)
| ++-+| -..+++-+-| +..|.++-.++.
T Consensus 325 ~----G~i~~-~~a~~~l~~g~aD~V~igR~~l~ 353 (402)
T 2hsa_B 325 S----GGYTR-ELGIEAVAQGDADLVSYGRLFIS 353 (402)
T ss_dssp E----SSCCH-HHHHHHHHTTSCSEEEESHHHHH
T ss_pred e----CCCCH-HHHHHHHHCCCCceeeecHHHHh
Confidence 4 23222 1234444445 889988776554
No 209
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=94.02 E-value=0.17 Score=50.36 Aligned_cols=129 Identities=19% Similarity=0.124 Sum_probs=82.9
Q ss_pred HHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecch----hhcccHHHHHHH
Q 012478 170 TVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDS----RQALSLEESLRR 245 (462)
Q Consensus 170 tVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA----~~~~gldeAI~R 245 (462)
.+...+++||+=|.|-|... .+| +.|.-. .|+++++.. +.+..++-|--. +....++...++
T Consensus 51 ~a~~A~~gGAdRIELc~~l~------~GG--lTPS~g---~i~~a~~~~---~ipV~vMIRPRgGdF~Ys~~E~~~M~~d 116 (287)
T 3iwp_A 51 SAVNAERGGADRIELCSGLS------EGG--TTPSMG---VLQVVKQSV---QIPVFVMIRPRGGDFLYSDREIEVMKAD 116 (287)
T ss_dssp HHHHHHHHTCSEEEECBCGG------GTC--BCCCHH---HHHHHHTTC---CSCEEEECCSSSSCSCCCHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEECCCCC------CCC--CCCCHH---HHHHHHHhc---CCCeEEEEecCCCCcccCHHHHHHHHHH
Confidence 34466789999999976531 122 445433 344444332 356666666432 123457888999
Q ss_pred HHHhHhcCCcEEEecCCC-----CHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccch
Q 012478 246 SRAFADAGADVLFIDALA-----SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLS 312 (462)
Q Consensus 246 akAy~eAGAD~Ifie~~~-----s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ 312 (462)
...+.++|||.|++-.+. +.+.++++.+...+.++.++.--.--..|.-..++|.++||.+|+...+
T Consensus 117 I~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~ 188 (287)
T 3iwp_A 117 IRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICRPLPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGC 188 (287)
T ss_dssp HHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHTTSCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTT
T ss_pred HHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCC
Confidence 999999999999998653 5677888877655455555533111112334578999999999998665
No 210
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=94.01 E-value=0.2 Score=51.11 Aligned_cols=99 Identities=18% Similarity=0.224 Sum_probs=59.3
Q ss_pred HHHHHHhC-CCce-EecccCChHHHHHHHHhCCcEEEecc-HHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEe
Q 012478 80 SLRQILEL-PGVH-QGPACFDALSAKLVEKSGFSFCFTSG-FSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGD 156 (462)
Q Consensus 80 ~LR~ll~~-~~~i-v~p~ayDalSArl~e~aGfdaI~vSG-~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD 156 (462)
.++++.+. ++.. ++-++.+.-.|+.++++|+|+|.++. -+.........+.+ .+.-+.+..+...++..++|||+|
T Consensus 139 ~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g-~p~~~~l~~v~~~~~~~~iPVIA~ 217 (366)
T 4fo4_A 139 RIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVG-VPQITAIADAAGVANEYGIPVIAD 217 (366)
T ss_dssp HHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCC-CCHHHHHHHHHHHHGGGTCCEEEE
T ss_pred HHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCCEEEEecCCCCCCCcccccCcc-cchHHHHHHHHHHHhhcCCeEEEe
Confidence 34444443 2444 44469999999999999999999951 11000000011112 233344555556666778999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCccEEEeC
Q 012478 157 GDNGYGNAMNVKRTVKGYIKAGFAGIILE 185 (462)
Q Consensus 157 ~DtGyG~~~nv~rtVk~l~~AGaaGI~IE 185 (462)
. |..++.++. ++..+||++|.+=
T Consensus 218 G--GI~~~~di~----kala~GAd~V~vG 240 (366)
T 4fo4_A 218 G--GIRFSGDIS----KAIAAGASCVMVG 240 (366)
T ss_dssp S--CCCSHHHHH----HHHHTTCSEEEES
T ss_pred C--CCCCHHHHH----HHHHcCCCEEEEC
Confidence 4 333554444 5557899999993
No 211
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=93.95 E-value=5.6 Score=39.72 Aligned_cols=210 Identities=18% Similarity=0.228 Sum_probs=136.4
Q ss_pred HHHHHHHhCCCceEecccCChHHHHH----HHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEE
Q 012478 79 KSLRQILELPGVHQGPACFDALSAKL----VEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVI 154 (462)
Q Consensus 79 ~~LR~ll~~~~~iv~p~ayDalSArl----~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVI 154 (462)
+-|....+.+--+-+.|+++.-+++. +++.+.+.|+-.+-+.. ...| .+.+...++..++ .++||.
T Consensus 7 ~ll~~A~~~~yAV~AfNv~n~e~~~Ail~AAee~~sPvIlq~s~g~~-~y~g--------~~~~~~~v~~~a~-~~VPVa 76 (305)
T 1rvg_A 7 EILKKAREEGYGVGAFNVNNMEFLQAVLEAAEEQRSPVILALSEGAM-KYGG--------RALTLMAVELAKE-ARVPVA 76 (305)
T ss_dssp HHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTTCCEEEEEEHHHH-HHHH--------HHHHHHHHHHHHH-CSSCEE
T ss_pred HHHHHHHHCCCEEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChhHH-hhCC--------HHHHHHHHHHHHh-CCCcEE
Confidence 34555555565688889999888754 45668998887754432 1223 3455666777777 889999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEE------
Q 012478 155 GDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV------ 228 (462)
Q Consensus 155 aD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIi------ 228 (462)
.=.|+|. + .+.+++.+++|...|.| |.. | .|.||=++.-+..++.+...| ..|=
T Consensus 77 lHlDHg~-~----~e~~~~ai~~GFtSVMi-DgS------~------~p~eENi~~Tk~vv~~ah~~g--vsVEaELG~v 136 (305)
T 1rvg_A 77 VHLDHGS-S----YESVLRALRAGFTSVMI-DKS------H------EDFETNVRETRRVVEAAHAVG--VTVEAELGRL 136 (305)
T ss_dssp EEEEEEC-S----HHHHHHHHHTTCSEEEE-CCT------T------SCHHHHHHHHHHHHHHHHHTT--CEEEEEESCC
T ss_pred EECCCCC-C----HHHHHHHHHcCCCeeee-CCC------C------CCHHHHHHHHHHHHHHHHHcC--CEEEEEEeec
Confidence 9999984 3 45566777999999999 442 3 367777777777776665322 1111
Q ss_pred Ee-cch------h-hcccHHHHHHHHHHhH-hcCCcEEEec-----CC--------CCHHHHHHHHHhCCCCceeeeeee
Q 012478 229 AR-TDS------R-QALSLEESLRRSRAFA-DAGADVLFID-----AL--------ASKEEMKAFCEISPLVPKMANMLE 286 (462)
Q Consensus 229 AR-TDA------~-~~~gldeAI~RakAy~-eAGAD~Ifie-----~~--------~s~eei~~i~~~v~~vP~~~N~l~ 286 (462)
+- -|. . .-.+-+| |+.|. +.|+|++-+- |. -+.+.++++.+.++ +|+. +.
T Consensus 137 gg~Ed~~~~~~~~~~yT~Pee----a~~Fv~~TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~~-vpLV---lH 208 (305)
T 1rvg_A 137 AGIEEHVAVDEKDALLTNPEE----ARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVP-APLV---LH 208 (305)
T ss_dssp CCSCC------CCTTCCCHHH----HHHHHHHHCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHCC-SCEE---EC
T ss_pred cCccCCccccccccccCCHHH----HHHHHHHHCCCEEEEecCccccccCCCCCCccCHHHHHHHHHhcC-CCEE---Ee
Confidence 11 111 0 0023343 45555 4899988652 22 14688999999886 6653 45
Q ss_pred cCC---------------C---CCCCCHHHHH---hcCCCEEeccchHHHHHHHHHHHHHH
Q 012478 287 GGG---------------K---TPILNPLELE---ELGFKLVAYPLSLIGVSVRAMQDALT 326 (462)
Q Consensus 287 ~~g---------------~---tP~ls~~eL~---~lGv~~V~yp~~ll~aa~~Am~~~l~ 326 (462)
|+. + +-.++.++++ ++|+.-|-+..-+..+...++++.+.
T Consensus 209 GgSsv~~~~~~~~~~~gg~~~~~~G~p~e~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~ 269 (305)
T 1rvg_A 209 GASAVPPELVERFRASGGEIGEAAGIHPEDIKKAISLGIAKINTDTDLRLAFTALIREALN 269 (305)
T ss_dssp SCCCCCHHHHHHHHHTTCCCCSCBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHhhccccccCCCCCHHHHHHHHHCCCeEEEEChHHHHHHHHHHHHHHH
Confidence 422 0 0035666665 78999999999999999999888864
No 212
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=93.92 E-value=0.46 Score=48.31 Aligned_cols=133 Identities=15% Similarity=0.217 Sum_probs=85.2
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCC---CCCccc---CHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhc
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHT---RGRKVV---SREEAVMRIKAAVDARKESGSDIVIVARTDSRQA 236 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~---~gk~Lv---p~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~ 236 (462)
++....+.++++.++|..+|+|--. +.-|+. .+.-+. +.++.+++|++++++. |+++.| +.|+...
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~---~~~G~~~~~~~G~~~~~~~~~~~~e~v~avRea~---G~d~~l--~vDan~~ 220 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVD---DITGPLHRDFWNGAISPREHEAMVARVAAVREAV---GPEVEV--AIDMHGR 220 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECC---CSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHHH---CSSSEE--EEECTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEeecc---ccCCcccCCcCccccchhhHHHHHHHHHHHHHhc---CCCCEE--EEECCCC
Confidence 4567778888999999999998421 001221 011121 3456678888887764 667766 4477677
Q ss_pred ccHHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHH---HhcC-CCEEec
Q 012478 237 LSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLEL---EELG-FKLVAY 309 (462)
Q Consensus 237 ~gldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL---~~lG-v~~V~y 309 (462)
..++++++-++++.+.|.+ |+|-+ .+.+.++++.+.++ +|+... +. ..+.+++ -+.| ++.|..
T Consensus 221 ~~~~~a~~~~~~l~~~~i~--~iEeP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~~~d~v~i 290 (410)
T 2qq6_A 221 FDIPSSIRFARAMEPFGLL--WLEEPTPPENLDALAEVRRSTS-TPICAG-----EN--VYTRFDFRELFAKRAVDYVMP 290 (410)
T ss_dssp CCHHHHHHHHHHHGGGCCS--EEECCSCTTCHHHHHHHHTTCS-SCEEEC-----TT--CCSHHHHHHHHHTTCCSEECC
T ss_pred CCHHHHHHHHHHHhhcCCC--eEECCCChhhHHHHHHHHhhCC-CCEEeC-----CC--cCCHHHHHHHHHcCCCCEEec
Confidence 7899999999999999877 55643 35778888888765 665532 22 2254444 4445 666666
Q ss_pred cchH
Q 012478 310 PLSL 313 (462)
Q Consensus 310 p~~l 313 (462)
-..-
T Consensus 291 k~~~ 294 (410)
T 2qq6_A 291 DVAK 294 (410)
T ss_dssp BHHH
T ss_pred Cccc
Confidence 4443
No 213
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=93.91 E-value=4.2 Score=42.42 Aligned_cols=198 Identities=14% Similarity=0.087 Sum_probs=109.4
Q ss_pred HHHhCCcEEEeccHHHHhhhccCC---------CCC--------CCCHHHHHHHHHHHHhh-------cCCcEEEeCCCC
Q 012478 105 VEKSGFSFCFTSGFSISAARLALP---------DTG--------FISYGEMVDQGQLITQA-------VSIPVIGDGDNG 160 (462)
Q Consensus 105 ~e~aGfdaI~vSG~avSas~lG~P---------D~g--------~vsl~Eml~~~~~I~ra-------~~iPVIaD~DtG 160 (462)
+.+.||-++.+++...- ...|-| |.+ ...++.+++..+...+. ...||++-+-..
T Consensus 111 l~~~GfG~v~~gtvT~~-pq~GNp~PR~~rl~e~~~iiN~~GfnN~G~~~~~~~l~~~~~~~~~~~~~~~~~vgvni~~~ 189 (443)
T 1tv5_A 111 ILKLGFSFIEIGTITPR-GQTGNAKPRIFRDVESRSIINSCGFNNMGCDKVTENLILFRKRQEEDKLLSKHIVGVSIGKN 189 (443)
T ss_dssp HHTTTCSEEEEEEECSS-CBCCSCSCCEEEETTTTEEEECCCSCBSCHHHHHHHHHHHHHHHHHCSTTTTCEEEEEECCC
T ss_pred HHhcCCCEEEEeeeecC-CCCCCCCccEEeccccceeeeccccCChhHHHHHHHHHHHhhhcccccccCCceEEEEecCc
Confidence 56789988887754431 112321 111 12345666666554332 235676665321
Q ss_pred C--CC-HHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCC-cccCHHHHHHHHHHHHHHHHhh---------------
Q 012478 161 Y--GN-AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGR-KVVSREEAVMRIKAAVDARKES--------------- 221 (462)
Q Consensus 161 y--G~-~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk-~Lvp~ee~~~kI~AA~~Ar~~~--------------- 221 (462)
. -+ .....+.++++.+ ++++|-|-=. |-++.|. .+...+...+-|+++++++.++
T Consensus 190 ~~~~~~~~dy~~~a~~l~~-~aD~ieiNis-----cPnt~Glr~lq~~~~l~~il~~v~~~~~~~~~~~~~~~g~~~~~~ 263 (443)
T 1tv5_A 190 KDTVNIVDDLKYCINKIGR-YADYIAINVS-----SPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDESTYNED 263 (443)
T ss_dssp TTCSCHHHHHHHHHHHHGG-GCSEEEEECC-----CTTSTTGGGGGSHHHHHHHHHHHHHHHHHHC--------------
T ss_pred ccchHHHHHHHHHHHHHhc-CCCEEEEecc-----CCCCcccccccCHHHHHHHHHHHHHHHhhhcccCccccccCHHHH
Confidence 1 11 3455566666655 7999888543 5555442 3444555554555555443211
Q ss_pred ------------------------------CCCeE-EEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCC-------
Q 012478 222 ------------------------------GSDIV-IVARTDSRQALSLEESLRRSRAFADAGADVLFIDALA------- 263 (462)
Q Consensus 222 ------------------------------g~d~v-IiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~------- 263 (462)
+.++- |..|.-. ....++..+-|++.+++|||+|.+..-.
T Consensus 264 ~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~vKisp--d~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~ 341 (443)
T 1tv5_A 264 NKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAP--DLNQEQKKEIADVLLETNIDGMIISNTTTQINDIK 341 (443)
T ss_dssp ------------------------CCCCSSSSSCCEEEEEECS--CCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCG
T ss_pred HHHHHHhhcccccchhhhhhhhhcchhcccCCCCCeEEEEeCC--CCCHHHHHHHHHHHHHcCCCEEEEECCCccccccc
Confidence 11232 3444211 1234577888999999999999887531
Q ss_pred -----------------CHHHHHHHHHhCC-CCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012478 264 -----------------SKEEMKAFCEISP-LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 264 -----------------s~eei~~i~~~v~-~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
+.+.++++.+.++ .+|++.+ ||-.-.-+..+.-++|.+.|-.+..++.
T Consensus 342 ~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~----GGI~s~~DA~e~l~aGAd~Vqigrall~ 407 (443)
T 1tv5_A 342 SFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIAS----GGIFSGLDALEKIEAGASVCQLYSCLVF 407 (443)
T ss_dssp GGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEE----SSCCSHHHHHHHHHTTEEEEEESHHHHH
T ss_pred ccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEE----CCCCCHHHHHHHHHcCCCEEEEcHHHHh
Confidence 1356777778774 3676543 3422222445566689999988877664
No 214
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=93.90 E-value=2.3 Score=43.53 Aligned_cols=83 Identities=19% Similarity=0.199 Sum_probs=53.0
Q ss_pred HHHHHHhHhcCCcEEEec---------CCCCHHHHHHHHHhCC-CCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccch
Q 012478 243 LRRSRAFADAGADVLFID---------ALASKEEMKAFCEISP-LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLS 312 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie---------~~~s~eei~~i~~~v~-~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ 312 (462)
.+.|+..+++|||+|.+. ++++.+.+.++.+.++ .+|++++ ||-.-..+....-.+|.+.|..+..
T Consensus 263 ~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~----GGI~~g~Dv~kalalGAd~V~iGr~ 338 (392)
T 2nzl_A 263 GDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLD----GGVRKGTDVLKALALGAKAVFVGRP 338 (392)
T ss_dssp HHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEEC----SSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEE----CCCCCHHHHHHHHHhCCCeeEECHH
Confidence 345888999999999993 2345677778877764 3565533 3432223445555689999999988
Q ss_pred HHHHHH----HHHHHHHHHHH
Q 012478 313 LIGVSV----RAMQDALTAIK 329 (462)
Q Consensus 313 ll~aa~----~Am~~~l~~l~ 329 (462)
++.+.. ..+.+.+..|+
T Consensus 339 ~l~~~~~~g~~gv~~~l~~l~ 359 (392)
T 2nzl_A 339 IVWGLAFQGEKGVQDVLEILK 359 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcChHHHHHHHHHHH
Confidence 776632 23444444444
No 215
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=93.83 E-value=0.5 Score=47.66 Aligned_cols=127 Identities=20% Similarity=0.306 Sum_probs=83.4
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCC-----------CCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHT-----------RGRKVVSREEAVMRIKAAVDARKESGSDIVIVART 231 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~-----------~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiART 231 (462)
++....+.++++.++|..+|+|- +||- +|...-+.+..+++|++++++. |+++.|. .
T Consensus 137 ~~~~~~~~a~~~~~~Gf~~vKik-------~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~---G~d~~l~--v 204 (392)
T 2poz_A 137 TPDEFARAVERPLKEGYGALKFY-------PLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAA---GPEIELM--V 204 (392)
T ss_dssp SHHHHHHHTHHHHHTTCSEEEEC-------CCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHH---CTTSEEE--E
T ss_pred CHHHHHHHHHHHHHcCCCEEEEe-------cccccccccccccccCCcchhhHHHHHHHHHHHHHhc---CCCCEEE--E
Confidence 56778888889999999999983 2331 0111123466678888887764 6677665 3
Q ss_pred chhhcccHHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHH---HHhcC-C
Q 012478 232 DSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELG-F 304 (462)
Q Consensus 232 DA~~~~gldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~e---L~~lG-v 304 (462)
|+.....++++++-++++.+.|.+ |+|-+ .+.+.++++.+.++ +|+..+ +. ..+.++ +-+.| +
T Consensus 205 D~n~~~~~~~a~~~~~~l~~~~i~--~iE~P~~~~~~~~~~~l~~~~~-ipIa~d-----E~--~~~~~~~~~~i~~~~~ 274 (392)
T 2poz_A 205 DLSGGLTTDETIRFCRKIGELDIC--FVEEPCDPFDNGALKVISEQIP-LPIAVG-----ER--VYTRFGFRKIFELQAC 274 (392)
T ss_dssp ECTTCSCHHHHHHHHHHHGGGCEE--EEECCSCTTCHHHHHHHHHHCS-SCEEEC-----TT--CCHHHHHHHHHTTTCC
T ss_pred ECCCCCCHHHHHHHHHHHHhcCCC--EEECCCCcccHHHHHHHHhhCC-CCEEec-----CC--cCCHHHHHHHHHcCCC
Confidence 666667889999999999988654 66654 36788889988875 676532 21 124444 44445 6
Q ss_pred CEEeccc
Q 012478 305 KLVAYPL 311 (462)
Q Consensus 305 ~~V~yp~ 311 (462)
+.|..-.
T Consensus 275 d~v~ik~ 281 (392)
T 2poz_A 275 GIIQPDI 281 (392)
T ss_dssp SEECCCT
T ss_pred CEEecCc
Confidence 6666533
No 216
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=93.82 E-value=3 Score=42.07 Aligned_cols=102 Identities=14% Similarity=0.168 Sum_probs=62.4
Q ss_pred HHHHHhHhcCCcEEEec--C-------CCCHHHHHHHHHhCC-CCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchH
Q 012478 244 RRSRAFADAGADVLFID--A-------LASKEEMKAFCEISP-LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSL 313 (462)
Q Consensus 244 ~RakAy~eAGAD~Ifie--~-------~~s~eei~~i~~~v~-~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~l 313 (462)
+.++...++|||.|.+- + +.+.+.+.++.+.++ .+|++.+ ||-...-+..++-++|.+.|..+..+
T Consensus 237 e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~----GGI~~~~D~~k~l~~GAdaV~iGr~~ 312 (370)
T 1gox_A 237 EDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLD----GGVRRGTDVFKALALGAAGVFIGRPV 312 (370)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEE----SSCCSHHHHHHHHHHTCSEEEECHHH
T ss_pred HHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEE----CCCCCHHHHHHHHHcCCCEEeecHHH
Confidence 35788889999999982 2 245567888888774 3565433 34332235566777999999999988
Q ss_pred HHHHH----HHHHHHHHHHHcCCCCCCCCCCCHHHHHHhcCcccHHHHHH
Q 012478 314 IGVSV----RAMQDALTAIKGGRIPSPGSMPSFQEIKETLGFNTYYEEEK 359 (462)
Q Consensus 314 l~aa~----~Am~~~l~~l~~g~~~~~~~~~s~~e~~~lvg~~~~~~~e~ 359 (462)
+.... .++.+.+..++++ ++....+.|.....++..
T Consensus 313 l~~~~~~G~~gv~~~~~~l~~e----------l~~~m~~~G~~~i~el~~ 352 (370)
T 1gox_A 313 VFSLAAEGEAGVKKVLQMMRDE----------FELTMALSGCRSLKEISR 352 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHTCSBTTTCCG
T ss_pred HHHHhhccHHHHHHHHHHHHHH----------HHHHHHHhCCCCHHHhhh
Confidence 76532 2334444444432 344455555554444433
No 217
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=93.81 E-value=0.25 Score=50.20 Aligned_cols=98 Identities=12% Similarity=0.128 Sum_probs=58.8
Q ss_pred HHHHHHhC-CCceEecccCChHHHHHHHHhCCcEEEecc-HHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeC
Q 012478 80 SLRQILEL-PGVHQGPACFDALSAKLVEKSGFSFCFTSG-FSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDG 157 (462)
Q Consensus 80 ~LR~ll~~-~~~iv~p~ayDalSArl~e~aGfdaI~vSG-~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~ 157 (462)
.++++.+. +-++++-++.+.-.|+.++++|+|+|.++. .+.........+.+ .+.-+.+..+..+++.+++|||+|.
T Consensus 136 ~i~~i~~~~~~~Vivg~v~t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g-~p~~~~i~~v~~~~~~~~iPVIA~G 214 (361)
T 3khj_A 136 TLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVGIGPGSICTTRIVAGVG-VPQITAIEKCSSVASKFGIPIIADG 214 (361)
T ss_dssp HHHHHHHHCCCEEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBC-CCHHHHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHHhcCCcEEEccCCCHHHHHHHHHcCcCEEEEecCCCcCCCcccccCCC-CCcHHHHHHHHHHHhhcCCeEEEEC
Confidence 34444333 445555588999999999999999999962 11000000011111 2333444555555666789999993
Q ss_pred CCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012478 158 DNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 158 DtGyG~~~nv~rtVk~l~~AGaaGI~I 184 (462)
|-.++.++. ++.++||++|.+
T Consensus 215 --GI~~~~di~----kala~GAd~V~v 235 (361)
T 3khj_A 215 --GIRYSGDIG----KALAVGASSVMI 235 (361)
T ss_dssp --CCCSHHHHH----HHHHHTCSEEEE
T ss_pred --CCCCHHHHH----HHHHcCCCEEEE
Confidence 333554544 455689999998
No 218
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=93.80 E-value=0.31 Score=49.50 Aligned_cols=142 Identities=13% Similarity=0.027 Sum_probs=85.2
Q ss_pred HHHHHH---HhCCcEEEec-cHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHH
Q 012478 101 SAKLVE---KSGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIK 176 (462)
Q Consensus 101 SArl~e---~aGfdaI~vS-G~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~ 176 (462)
.|+.++ +.|+|+|=+= |.-. .-|..+.+ ...+.+.+.++.+.+.+++||++=+--++ +..++.+.++.+.+
T Consensus 144 ~a~~l~~~~~~g~d~ielNisCPn---~~gg~~l~-~~~e~~~~il~av~~~~~~PV~vKi~p~~-d~~~~~~~a~~~~~ 218 (354)
T 4ef8_A 144 MCKRLAAVATEKGVILELNLSCPN---VPGKPQVA-YDFDAMRQCLTAVSEVYPHSFGVKMPPYF-DFAHFDAAAEILNE 218 (354)
T ss_dssp HHHHHHHHHHHHCCEEEEECSSCC---STTSCCGG-GSHHHHHHHHHHHHHHCCSCEEEEECCCC-SHHHHHHHHHHHHT
T ss_pred HHHHHhhhhhcCCCEEEEeCCCCC---CCCchhhc-cCHHHHHHHHHHHHHhhCCCeEEEecCCC-CHHHHHHHHHHHHh
Confidence 356666 5688887654 3111 11333321 24566677778888888999999988876 66778888888889
Q ss_pred hC-ccEEEeCCCC-----------CC----C-CCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccH
Q 012478 177 AG-FAGIILEDQV-----------SP----K-GCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (462)
Q Consensus 177 AG-aaGI~IEDq~-----------~P----K-rCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gl 239 (462)
+| ++||.+-... .| + .-|-..|+++-|.. .+.|+.++++ .+++-|++--+-.. .
T Consensus 219 ~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a--~~~i~~v~~~----~~~ipII~~GGI~s---~ 289 (354)
T 4ef8_A 219 FPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTA--LANINAFYRR----CPGKLIFGCGGVYT---G 289 (354)
T ss_dssp CTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHH--HHHHHHHHHH----CTTSEEEEESCCCS---H
T ss_pred CCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHH--HHHHHHHHHh----CCCCCEEEECCcCC---H
Confidence 98 9998752111 01 1 11223456554443 3444444443 24577776655432 2
Q ss_pred HHHHHHHHHhHhcCCcEEEec
Q 012478 240 EESLRRSRAFADAGADVLFID 260 (462)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie 260 (462)
+ .+..+.++|||+|.+-
T Consensus 290 ~----da~~~l~aGAd~V~vg 306 (354)
T 4ef8_A 290 E----DAFLHVLAGASMVQVG 306 (354)
T ss_dssp H----HHHHHHHHTEEEEEEC
T ss_pred H----HHHHHHHcCCCEEEEh
Confidence 3 3445567999999973
No 219
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=93.79 E-value=0.93 Score=45.76 Aligned_cols=157 Identities=17% Similarity=0.250 Sum_probs=93.1
Q ss_pred HHhCCcEEEeccHHHHhhhccCCCC-CCCCHH---HHHHHHHHHHhhc-CCcEEEeC------CCCC-------C---CH
Q 012478 106 EKSGFSFCFTSGFSISAARLALPDT-GFISYG---EMVDQGQLITQAV-SIPVIGDG------DNGY-------G---NA 164 (462)
Q Consensus 106 e~aGfdaI~vSG~avSas~lG~PD~-g~vsl~---Eml~~~~~I~ra~-~iPVIaD~------DtGy-------G---~~ 164 (462)
.+.|.+++.+=|.--. -..|. +.-.++ =+...++.|.+.. ++-||.|. ++|. | |.
T Consensus 69 ~~~Gi~~v~LFgvp~~----~~Kd~~gs~A~~~~g~v~~air~iK~~~pdl~vitDvcLc~YT~HGHcGil~~~g~v~ND 144 (330)
T 1pv8_A 69 VEEGLRCVLIFGVPSR----VPKDERGSAADSEESPAIEAIHLLRKTFPNLLVACDVCLCPYTSHGHCGLLSENGAFRAE 144 (330)
T ss_dssp HHHTCCEEEEEECC------------------CCSHHHHHHHHHHHHSTTSEEEEEECCC---------------CHHHH
T ss_pred HHCCCCEEEEecCCcc----cCCCccccccCCCCChHHHHHHHHHHHCCCeEEEEeeecccccCCCceeEECCCCcCccH
Confidence 3569998887543110 00111 222222 2455677777665 47788886 3342 1 11
Q ss_pred HHHH---HHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCC-C-eEEEEecc-------
Q 012478 165 MNVK---RTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGS-D-IVIVARTD------- 232 (462)
Q Consensus 165 ~nv~---rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~-d-~vIiARTD------- 232 (462)
..+. +..-.+.+|||+.|-=-|- |+| ||.|++++.++.|- + .-|.+-+-
T Consensus 145 ~Tl~~La~~Als~A~AGAdiVAPSdM--------MDG-----------rV~aIR~aLd~~G~~~~v~ImsYsaKyASafY 205 (330)
T 1pv8_A 145 ESRQRLAEVALAYAKAGCQVVAPSDM--------MDG-----------RVEAIKEALMAHGLGNRVSVMSYSAKFASCFY 205 (330)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEECC----------CC-----------HHHHHHHHHHHTTCTTTCEEBCCCEECCCGGG
T ss_pred HHHHHHHHHHHHHHHcCCCeeecccc--------ccc-----------HHHHHHHHHHhCCCcCCceEeehhHHHhHhhh
Confidence 2222 3333455899998876553 343 66677777665553 4 66766542
Q ss_pred -----hhhc--------------ccHHHHHHHHHHhHhcCCcEEEe-cCCCCHHHHHHHHHhCCCCceeeeee
Q 012478 233 -----SRQA--------------LSLEESLRRSRAFADAGADVLFI-DALASKEEMKAFCEISPLVPKMANML 285 (462)
Q Consensus 233 -----A~~~--------------~gldeAI~RakAy~eAGAD~Ifi-e~~~s~eei~~i~~~v~~vP~~~N~l 285 (462)
|... ..-+||++.+..=.+-|||+|+| |+++-.+.++++.+.+|.+|+.+=.+
T Consensus 206 GPFRdAa~Sap~~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKPal~YLDIi~~vk~~~p~~P~aaYqV 278 (330)
T 1pv8_A 206 GPFRDAAKSSPAFGDRRCYQLPPGARGLALRAVDRDVREGADMLMVKPGMPYLDIVREVKDKHPDLPLAVYHV 278 (330)
T ss_dssp HHHHHCC-------------CCTTCHHHHHHHHHHHHHTTCSBEEEESCGGGHHHHHHHHHHSTTSCEEEEEC
T ss_pred hHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCceEEEecCccHHHHHHHHHHhcCCCCeEEEEc
Confidence 2110 12589999999999999999999 88999999999999997788754433
No 220
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=93.79 E-value=3.4 Score=40.22 Aligned_cols=140 Identities=16% Similarity=0.093 Sum_probs=88.9
Q ss_pred ChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHh---hcCCcEEEeCCC-------CCCCHHHH
Q 012478 98 DALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQ---AVSIPVIGDGDN-------GYGNAMNV 167 (462)
Q Consensus 98 DalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~r---a~~iPVIaD~Dt-------GyG~~~nv 167 (462)
+.-....+-++|++.+-+.... +-. + ....-..+.+|.++.+..+.+ ..+++|.++.-+ |.-++..+
T Consensus 82 ~~~~i~~a~~ag~~~v~i~~~~-sd~-~-~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~ 158 (298)
T 2cw6_A 82 NLKGFEAAVAAGAKEVVIFGAA-SEL-F-TKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKV 158 (298)
T ss_dssp SHHHHHHHHHTTCSEEEEEEES-CHH-H-HHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHH
T ss_pred CHHhHHHHHHCCCCEEEEEecC-CHH-H-HHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHH
Confidence 4445666777899988776311 100 0 000112478888877776554 346788655432 33467889
Q ss_pred HHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHH
Q 012478 168 KRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSR 247 (462)
Q Consensus 168 ~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~Rak 247 (462)
.+.++.+.++||..|.|-|.. | +..++++.+.|++.++... +..+-+-...|. .-++.-+.
T Consensus 159 ~~~~~~~~~~Ga~~i~l~DT~-----G------~~~P~~~~~lv~~l~~~~~--~~~i~~H~Hn~~------Gla~An~l 219 (298)
T 2cw6_A 159 AEVTKKFYSMGCYEISLGDTI-----G------VGTPGIMKDMLSAVMQEVP--LAALAVHCHDTY------GQALANTL 219 (298)
T ss_dssp HHHHHHHHHTTCSEEEEEETT-----S------CCCHHHHHHHHHHHHHHSC--GGGEEEEEBCTT------SCHHHHHH
T ss_pred HHHHHHHHHcCCCEEEecCCC-----C------CcCHHHHHHHHHHHHHhCC--CCeEEEEECCCC------chHHHHHH
Confidence 999999999999999999985 3 3446777777777776531 123444444443 12355677
Q ss_pred HhHhcCCcEEEe
Q 012478 248 AFADAGADVLFI 259 (462)
Q Consensus 248 Ay~eAGAD~Ifi 259 (462)
+..+|||+.|=.
T Consensus 220 aA~~aGa~~vd~ 231 (298)
T 2cw6_A 220 MALQMGVSVVDS 231 (298)
T ss_dssp HHHHTTCCEEEE
T ss_pred HHHHhCCCEEEe
Confidence 788999998753
No 221
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=93.78 E-value=0.28 Score=49.82 Aligned_cols=138 Identities=14% Similarity=0.105 Sum_probs=78.0
Q ss_pred HHHHHHHHHHhCccEEEeCCCC-----------CCCCCCCCCCCcccC-HHHHHHHHHHHHHHHHhhCCCeEEEEecchh
Q 012478 167 VKRTVKGYIKAGFAGIILEDQV-----------SPKGCGHTRGRKVVS-REEAVMRIKAAVDARKESGSDIVIVARTDSR 234 (462)
Q Consensus 167 v~rtVk~l~~AGaaGI~IEDq~-----------~PKrCGH~~gk~Lvp-~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~ 234 (462)
..+++++..++|.+||.|-..- ..||...-+| .+-. ..-..+-|+|++++. |++ .|..|.-..
T Consensus 163 f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGG-slenR~rf~~evv~aVr~~v---g~~-~v~vRls~~ 237 (361)
T 3gka_A 163 FRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGG-SIENRARLLLEVVDAAIDVW---SAA-RVGVHLAPR 237 (361)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSS-SHHHHSHHHHHHHHHHHHHH---CGG-GEEEEECTT
T ss_pred HHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCC-ChhhcHHHHHHHHHHHHHHc---CCC-eEEEecccc
Confidence 3455677778999999996652 1233333233 1211 122344555555543 444 445564432
Q ss_pred h-------cccHHHHHHHHHHhHhcCCcEEEecCCCC-HHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcC-CC
Q 012478 235 Q-------ALSLEESLRRSRAFADAGADVLFIDALAS-KEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELG-FK 305 (462)
Q Consensus 235 ~-------~~gldeAI~RakAy~eAGAD~Ifie~~~s-~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lG-v~ 305 (462)
. ....+++++-+++++++|+|.|-+....+ .+.++++.+.++ +|++.| ++-+| -..+++-+-| +.
T Consensus 238 ~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~~~-iPvi~~----Ggit~-e~a~~~l~~G~aD 311 (361)
T 3gka_A 238 GDAHTMGDSDPAATFGHVARELGRRRIAFLFARESFGGDAIGQQLKAAFG-GPFIVN----ENFTL-DSAQAALDAGQAD 311 (361)
T ss_dssp CCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCSTTCCHHHHHHHHC-SCEEEE----SSCCH-HHHHHHHHTTSCS
T ss_pred cccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHcC-CCEEEe----CCCCH-HHHHHHHHcCCcc
Confidence 1 12367899999999999999998765321 134555666665 576654 23222 1234444455 88
Q ss_pred EEeccchHHH
Q 012478 306 LVAYPLSLIG 315 (462)
Q Consensus 306 ~V~yp~~ll~ 315 (462)
.|.++-.++.
T Consensus 312 ~V~iGR~~la 321 (361)
T 3gka_A 312 AVAWGKLFIA 321 (361)
T ss_dssp EEEESHHHHH
T ss_pred EEEECHHhHh
Confidence 9988765554
No 222
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=93.73 E-value=0.18 Score=49.74 Aligned_cols=149 Identities=11% Similarity=0.124 Sum_probs=84.0
Q ss_pred HHHHHHHhCCcEEEec-cHHHHhhh-ccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhC
Q 012478 101 SAKLVEKSGFSFCFTS-GFSISAAR-LALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAG 178 (462)
Q Consensus 101 SArl~e~aGfdaI~vS-G~avSas~-lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AG 178 (462)
.|+.++++ ||+|-+- |....... -|+-..-.-...-+.+.++.|.+.+++||++.+-.|+..... .+.++.++++|
T Consensus 76 aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~~~-~~~a~~l~~~G 153 (318)
T 1vhn_A 76 AARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEV-EEIYRILVEEG 153 (318)
T ss_dssp HHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSCCH-HHHHHHHHHTT
T ss_pred HHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCCCChHHH-HHHHHHHHHhC
Confidence 56777778 9998876 32111111 111110112345566777888888889999999888754322 27789999999
Q ss_pred ccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHh-cCCcEE
Q 012478 179 FAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFAD-AGADVL 257 (462)
Q Consensus 179 aaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~e-AGAD~I 257 (462)
+++|++.+.... .++. +... . +++.+|+. +.+++.++.. .. .+ .+..+.+ .|||+|
T Consensus 154 ~d~i~v~g~~~~--~~~~-~~~~--~-~~i~~i~~--------~ipVi~~GgI--~s---~~----da~~~l~~~gad~V 210 (318)
T 1vhn_A 154 VDEVFIHTRTVV--QSFT-GRAE--W-KALSVLEK--------RIPTFVSGDI--FT---PE----DAKRALEESGCDGL 210 (318)
T ss_dssp CCEEEEESSCTT--TTTS-SCCC--G-GGGGGSCC--------SSCEEEESSC--CS---HH----HHHHHHHHHCCSEE
T ss_pred CCEEEEcCCCcc--ccCC-CCcC--H-HHHHHHHc--------CCeEEEECCc--CC---HH----HHHHHHHcCCCCEE
Confidence 999999765321 1111 2111 1 23333321 2344444432 11 12 2333333 699999
Q ss_pred Eec--CCCCHHHHHHHHHh
Q 012478 258 FID--ALASKEEMKAFCEI 274 (462)
Q Consensus 258 fie--~~~s~eei~~i~~~ 274 (462)
++- .+.+++.+.++.+.
T Consensus 211 ~iGR~~l~~P~l~~~~~~~ 229 (318)
T 1vhn_A 211 LVARGAIGRPWIFKQIKDF 229 (318)
T ss_dssp EESGGGTTCTTHHHHHHHH
T ss_pred EECHHHHhCcchHHHHHHH
Confidence 984 35566666666653
No 223
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=93.67 E-value=2 Score=44.00 Aligned_cols=141 Identities=15% Similarity=0.165 Sum_probs=90.5
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEE
Q 012478 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA 229 (462)
Q Consensus 150 ~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiA 229 (462)
.+|+-+-. |..+++.+.+.++++.+.|..++|| .+..+. +... ..-+.++-+++|+|++++. |+++.|.
T Consensus 114 ~v~~y~~~--~~~~~e~~~~~a~~~~~~G~~~iKl-~G~~~~--~~~~--~~~~~~~d~e~v~avR~av---G~d~~L~- 182 (405)
T 3rr1_A 114 KMRTYSWV--GGDRPADVIAGMKALQAGGFDHFKL-NGCEEM--GIID--TSRAVDAAVARVAEIRSAF---GNTVEFG- 182 (405)
T ss_dssp CEEEEEEC--CCSSHHHHHHHHHHHHHTTCCEEEE-ESCCSS--SCBC--SHHHHHHHHHHHHHHHHTT---GGGSEEE-
T ss_pred ceeeeEeC--CCCCHHHHHHHHHHHHHcCCCEEEE-ecCCcc--cccc--cchhHHHHHHHHHHHHHHh---CCCceEE-
Confidence 36665533 4457888999999999999999999 332110 0000 0112456678888887764 4566654
Q ss_pred ecchhhcccHHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHH---hcC
Q 012478 230 RTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE---ELG 303 (462)
Q Consensus 230 RTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~---~lG 303 (462)
.|+.....+++|++-++++.+.|.+.| |-+ .+.+.++++.+.++ +|+..+ +. ..+..++. +.|
T Consensus 183 -vDaN~~~~~~~A~~~~~~L~~~~i~~i--EeP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--i~~~~~~~~~l~~~ 251 (405)
T 3rr1_A 183 -LDFHGRVSAPMAKVLIKELEPYRPLFI--EEPVLAEQAETYARLAAHTH-LPIAAG-----ER--MFSRFDFKRVLEAG 251 (405)
T ss_dssp -EECCSCBCHHHHHHHHHHHGGGCCSCE--ECSSCCSSTHHHHHHHTTCS-SCEEEC-----TT--CCSHHHHHHHHHHC
T ss_pred -EECCCCCCHHHHHHHHHHHHhcCCCEE--ECCCCcccHHHHHHHHhcCC-CCEEec-----CC--cCCHHHHHHHHHHh
Confidence 367677789999999999999986644 433 25678888888765 676533 21 23555444 335
Q ss_pred -CCEEeccch
Q 012478 304 -FKLVAYPLS 312 (462)
Q Consensus 304 -v~~V~yp~~ 312 (462)
++.|..-..
T Consensus 252 a~d~v~~d~~ 261 (405)
T 3rr1_A 252 GVSILQPDLS 261 (405)
T ss_dssp CCSEECCBTT
T ss_pred CCCeEEEChh
Confidence 666666444
No 224
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=93.65 E-value=0.75 Score=43.30 Aligned_cols=138 Identities=14% Similarity=0.112 Sum_probs=78.8
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchh
Q 012478 155 GDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSR 234 (462)
Q Consensus 155 aD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~ 234 (462)
.+.|.|.....+-...++..++.|+++|-+.=.....+.| ..+.+.+.|++++++.. ++.+--.-+.
T Consensus 60 ~~~P~g~~~~~~k~~~~~~A~~~Gad~Id~viN~g~~~~~--------~~~~~~~~i~~v~~a~~----pv~vKvi~e~- 126 (225)
T 1mzh_A 60 IGFPLGLNKTSVKVKEAVEAVRDGAQELDIVWNLSAFKSE--------KYDFVVEELKEIFRETP----SAVHKVIVET- 126 (225)
T ss_dssp ESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTT--------CHHHHHHHHHHHHHTCT----TSEEEEECCG-
T ss_pred ecCCCCccchhhhHHHHHHHHHcCCCEEEEEecHHHHhcC--------ChHHHHHHHHHHHHHhc----CceEEEEEeC-
Confidence 3556675555554455678889999999853222101111 12456666777776643 3433221111
Q ss_pred hcccHHHHHHHHHHhHhcCCcEEEecC-C----CCHHHHHHHHHhCC-CCceeeeeeecCCCCCCCCHHHHHhcCCCEEe
Q 012478 235 QALSLEESLRRSRAFADAGADVLFIDA-L----ASKEEMKAFCEISP-LVPKMANMLEGGGKTPILNPLELEELGFKLVA 308 (462)
Q Consensus 235 ~~~gldeAI~RakAy~eAGAD~Ifie~-~----~s~eei~~i~~~v~-~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~ 308 (462)
.....++..+-++...++|||.|-.-. . .+.+.++.+.+.++ .+|+..+ ||-...-+..++-++|..+|-
T Consensus 127 ~~l~~~~~~~~a~~a~eaGad~I~tstg~~~gga~~~~i~~v~~~v~~~ipVia~----GGI~t~~da~~~l~aGA~~iG 202 (225)
T 1mzh_A 127 PYLNEEEIKKAVEICIEAGADFIKTSTGFAPRGTTLEEVRLIKSSAKGRIKVKAS----GGIRDLETAISMIEAGADRIG 202 (225)
T ss_dssp GGCCHHHHHHHHHHHHHHTCSEEECCCSCSSSCCCHHHHHHHHHHHTTSSEEEEE----SSCCSHHHHHHHHHTTCSEEE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEECCCCCCCCCCHHHHHHHHHHhCCCCcEEEE----CCCCCHHHHHHHHHhCchHHH
Confidence 112346678889999999999995431 1 26678888887763 3565543 342211234455567999764
Q ss_pred c
Q 012478 309 Y 309 (462)
Q Consensus 309 y 309 (462)
.
T Consensus 203 ~ 203 (225)
T 1mzh_A 203 T 203 (225)
T ss_dssp E
T ss_pred H
Confidence 3
No 225
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=93.65 E-value=0.3 Score=48.01 Aligned_cols=85 Identities=21% Similarity=0.246 Sum_probs=64.0
Q ss_pred HHHHHHhCccEEEeCC-CCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHh
Q 012478 171 VKGYIKAGFAGIILED-QVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAF 249 (462)
Q Consensus 171 Vk~l~~AGaaGI~IED-q~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy 249 (462)
.+.++++|+.+|-+-+ +..- ..|+.+ ..+++.+|++..+++++.+. +..|++=-|.-...+.+++.+-++.|
T Consensus 29 A~~~~~aG~~ai~vsg~s~a~-~~G~pD-~~~vt~~em~~~~~~I~~~~-----~~pviaD~d~Gyg~~~~~~~~~v~~l 101 (275)
T 2ze3_A 29 ARLLEAAGFTAIGTTSAGIAH-ARGRTD-GQTLTRDEMGREVEAIVRAV-----AIPVNADIEAGYGHAPEDVRRTVEHF 101 (275)
T ss_dssp HHHHHHHTCSCEEECHHHHHH-HSCCCS-SSSSCHHHHHHHHHHHHHHC-----SSCEEEECTTCSSSSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECcHHHHH-hCCCCC-CCCCCHHHHHHHHHHHHhhc-----CCCEEeecCCCCCCCHHHHHHHHHHH
Confidence 4567789999999984 4421 356654 34789999999999988774 34566655553333578899999999
Q ss_pred HhcCCcEEEecCC
Q 012478 250 ADAGADVLFIDAL 262 (462)
Q Consensus 250 ~eAGAD~Ifie~~ 262 (462)
.++||.+|-+|.-
T Consensus 102 ~~aGaagv~iED~ 114 (275)
T 2ze3_A 102 AALGVAGVNLEDA 114 (275)
T ss_dssp HHTTCSEEEEECB
T ss_pred HHcCCcEEEECCC
Confidence 9999999999974
No 226
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=93.57 E-value=0.8 Score=46.06 Aligned_cols=127 Identities=13% Similarity=0.152 Sum_probs=90.6
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccH
Q 012478 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (462)
Q Consensus 160 GyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gl 239 (462)
|.++++.+.+.++.+.+.|...+||-= |. -+.++-+++|++++++. ++..+ |.|+-.....
T Consensus 140 ~~~~~e~~~~~a~~~~~~G~~~iK~Kv-------g~------~~~~~d~~~v~avr~~~----~~~~l--~vDaN~~~~~ 200 (365)
T 3ik4_A 140 TAGDEVHAAASAKAILARGIKSIKVKT-------AG------VDVAYDLARLRAIHQAA----PTAPL--IVDGNCGYDV 200 (365)
T ss_dssp CCSCHHHHHHHHHHHHHTTCCCEEEEC-------CS------SCHHHHHHHHHHHHHHS----SSCCE--EEECTTCCCH
T ss_pred cCCCHHHHHHHHHHHHHcCCCEEEEEe-------CC------CCHHHHHHHHHHHHHhC----CCCeE--EEECCCCCCH
Confidence 456788888888999899999999932 22 13567788999988874 34322 6799888899
Q ss_pred HHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHh---cC-CCEEeccch
Q 012478 240 EESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE---LG-FKLVAYPLS 312 (462)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~---lG-v~~V~yp~~ 312 (462)
++|++.++++.++..+..|+|-+ .+.+.++++.+..+ +|+... .. ..+..++.+ .| ++.+..=..
T Consensus 201 ~~A~~~~~~L~~~~~~i~~iEeP~~~~d~~~~~~l~~~~~-ipIa~d-----E~--~~~~~~~~~~i~~~a~d~v~ik~~ 272 (365)
T 3ik4_A 201 ERALAFCAACKAESIPMVLFEQPLPREDWAGMAQVTAQSG-FAVAAD-----ES--ARSAHDVLRIAREGTASVINIKLM 272 (365)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCSCTTCHHHHHHHHHHSS-SCEEES-----TT--CSSHHHHHHHHHHTCCSEEEECHH
T ss_pred HHHHHHHHHHhhCCCCceEEECCCCcccHHHHHHHHhhCC-CCEEEC-----CC--CCCHHHHHHHHHhCCCCEEEEcCC
Confidence 99999999997667788999875 26788999988875 676533 11 345655544 44 666655444
Q ss_pred H
Q 012478 313 L 313 (462)
Q Consensus 313 l 313 (462)
-
T Consensus 273 ~ 273 (365)
T 3ik4_A 273 K 273 (365)
T ss_dssp H
T ss_pred c
Confidence 4
No 227
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=93.55 E-value=0.21 Score=50.74 Aligned_cols=82 Identities=17% Similarity=0.098 Sum_probs=56.1
Q ss_pred CCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhc--CCcEEEeCCCCCCCHH
Q 012478 88 PGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV--SIPVIGDGDNGYGNAM 165 (462)
Q Consensus 88 ~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~--~iPVIaD~DtGyG~~~ 165 (462)
+.++++-++.+.-.|+.++++|+|+|.+|+.+- . ..|.+..++ +++ ..|.+.+ ++|||+|..- -+..
T Consensus 229 ~~PvivK~v~~~e~a~~a~~~Gad~I~vs~~gg---r--~~~~g~~~~-~~l---~~v~~~v~~~ipVia~GGI--~~g~ 297 (368)
T 2nli_A 229 GLPVFVKGIQHPEDADMAIKRGASGIWVSNHGA---R--QLYEAPGSF-DTL---PAIAERVNKRVPIVFDSGV--RRGE 297 (368)
T ss_dssp SSCEEEEEECSHHHHHHHHHTTCSEEEECCGGG---T--SCSSCCCHH-HHH---HHHHHHHTTSSCEEECSSC--CSHH
T ss_pred CCCEEEEcCCCHHHHHHHHHcCCCEEEEcCCCc---C--CCCCCCChH-HHH---HHHHHHhCCCCeEEEECCC--CCHH
Confidence 467888788899999999999999999997541 1 235555555 333 3333333 6999999433 3444
Q ss_pred HHHHHHHHHHHhCccEEEe
Q 012478 166 NVKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 166 nv~rtVk~l~~AGaaGI~I 184 (462)
++. ++...||++|.|
T Consensus 298 D~~----kalalGAd~V~i 312 (368)
T 2nli_A 298 HVA----KALASGADVVAL 312 (368)
T ss_dssp HHH----HHHHTTCSEEEE
T ss_pred HHH----HHHHcCCCEEEE
Confidence 454 333589999998
No 228
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=93.49 E-value=1.2 Score=40.29 Aligned_cols=63 Identities=21% Similarity=0.121 Sum_probs=37.3
Q ss_pred HhHhcCCcEEEecC--CCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012478 248 AFADAGADVLFIDA--LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 248 Ay~eAGAD~Ifie~--~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
...++|||+|-+.. ....+.++++.+.++.+|+ +..||-++ -+..++.++|+..|..+..++.
T Consensus 119 ~a~~~Gad~vk~~~~~~~g~~~~~~l~~~~~~~pv----ia~GGI~~-~~~~~~~~~Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 119 KAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKF----VPTGGVNL-DNVCEWFKAGVLAVGVGSALVK 183 (205)
T ss_dssp HHHHTTCCEEEETTHHHHHHHHHHHHHTTCTTCEE----EEBSSCCT-TTHHHHHHHTCSCEEECHHHHC
T ss_pred HHHHcCCCEEEEcCccccCHHHHHHHHHhCCCCcE----EEcCCCCH-HHHHHHHHCCCCEEEECccccC
Confidence 33455666554321 0122445555554433343 33346554 4889999999999999987765
No 229
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=93.48 E-value=4.9 Score=38.65 Aligned_cols=132 Identities=13% Similarity=0.069 Sum_probs=84.1
Q ss_pred HHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhh---cccHHHHHHH
Q 012478 169 RTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQ---ALSLEESLRR 245 (462)
Q Consensus 169 rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~---~~gldeAI~R 245 (462)
..++..++.||.+|.+=... |. -+.+++.+.+++++++.++.+..++++..-|... ... ++.+.+
T Consensus 96 ~~ve~Ai~~Ga~~v~~~~ni-----g~------~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s-~~~i~~ 163 (263)
T 1w8s_A 96 CSVEEAVSLGASAVGYTIYP-----GS------GFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETA-PEIVAY 163 (263)
T ss_dssp SCHHHHHHTTCSEEEEEECT-----TS------TTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTC-HHHHHH
T ss_pred HHHHHHHHCCCCEEEEEEec-----CC------cCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCC-HHHHHH
Confidence 44677888999999884422 11 1246777888888877766566777764332110 002 344555
Q ss_pred -HHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCC-C-----CHHHHHhcCCCEEeccchHHHH
Q 012478 246 -SRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPI-L-----NPLELEELGFKLVAYPLSLIGV 316 (462)
Q Consensus 246 -akAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~-l-----s~~eL~~lGv~~V~yp~~ll~a 316 (462)
|+...++|||.|-+.-..+.+.++++++..+.+|+. .. ||.... . ...++.+.|..-++.+...+.+
T Consensus 164 a~~~a~~~GAD~vkt~~~~~~e~~~~~~~~~~~~pV~---as-GGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~ 237 (263)
T 1w8s_A 164 AARIALELGADAMKIKYTGDPKTFSWAVKVAGKVPVL---MS-GGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQR 237 (263)
T ss_dssp HHHHHHHHTCSEEEEECCSSHHHHHHHHHHTTTSCEE---EE-CCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTS
T ss_pred HHHHHHHcCCCEEEEcCCCCHHHHHHHHHhCCCCeEE---EE-eCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCC
Confidence 688999999999887544789999999887533633 22 343210 0 2334447899999988887754
No 230
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=93.48 E-value=0.42 Score=50.15 Aligned_cols=99 Identities=17% Similarity=0.164 Sum_probs=62.1
Q ss_pred HHHHHhC--CCceEecccCChHHHHHHHHhCCcEEEec-cHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeC
Q 012478 81 LRQILEL--PGVHQGPACFDALSAKLVEKSGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDG 157 (462)
Q Consensus 81 LR~ll~~--~~~iv~p~ayDalSArl~e~aGfdaI~vS-G~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~ 157 (462)
++++.+. +-++++-++.+.-.|+.++++|+|+|.+| +.+-..+..-.++.+ .+....+..++.+++.+++|||+|.
T Consensus 287 i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g-~~~~~~~~~~~~~~~~~~ipVia~G 365 (514)
T 1jcn_A 287 VHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACG-RPQGTAVYKVAEYARRFGVPIIADG 365 (514)
T ss_dssp HHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSCCBTTBCCCSCC-CCHHHHHHHHHHHHGGGTCCEEEES
T ss_pred HHHHHHhCCCCceEecccchHHHHHHHHHcCCCEEEECCCCCcccccccccCCC-ccchhHHHHHHHHHhhCCCCEEEEC
Confidence 4444433 33444457899999999999999999985 112110111122222 2344556777888888899999994
Q ss_pred CCCCCCHHHHHHHHHHHHHhCccEEEeCC
Q 012478 158 DNGYGNAMNVKRTVKGYIKAGFAGIILED 186 (462)
Q Consensus 158 DtGyG~~~nv~rtVk~l~~AGaaGI~IED 186 (462)
|..++.++. ++..+||++|.+=-
T Consensus 366 --GI~~~~di~----kala~GAd~V~iG~ 388 (514)
T 1jcn_A 366 --GIQTVGHVV----KALALGASTVMMGS 388 (514)
T ss_dssp --CCCSHHHHH----HHHHTTCSEEEEST
T ss_pred --CCCCHHHHH----HHHHcCCCeeeECH
Confidence 333554555 44458999999944
No 231
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=93.47 E-value=1.1 Score=42.86 Aligned_cols=184 Identities=11% Similarity=0.127 Sum_probs=103.9
Q ss_pred HHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012478 105 VEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 105 ~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~I 184 (462)
+.++|.|+|.+|| ...++.+++.+.+++|.+ +++|++. ..|+ +..+ ..|++|+.+
T Consensus 27 ~~~~GtD~i~vGG------------s~gvt~~~~~~~v~~ik~-~~~Pvvl--fp~~--~~~v--------~~gaD~~l~ 81 (228)
T 3vzx_A 27 LCESGTDAVIIGG------------SDGVTEDNVLRMMSKVRR-FLVPCVL--EVSA--IEAI--------VPGFDLYFI 81 (228)
T ss_dssp HHTSSCSEEEECC------------CSCCCHHHHHHHHHHHTT-SSSCEEE--ECSC--GGGC--------CSCCSEEEE
T ss_pred HHHcCCCEEEECC------------cCCCCHHHHHHHHHHhhc-cCCCEEE--eCCC--HHHc--------cccCCEEEE
Confidence 4578999999999 233778999999999988 8999998 2332 3222 269999998
Q ss_pred CCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHH-----h-hCCCeEEEEecchhh-------cccHHHHHHHHHHhHh
Q 012478 185 EDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARK-----E-SGSDIVIVARTDSRQ-------ALSLEESLRRSRAFAD 251 (462)
Q Consensus 185 EDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~-----~-~g~d~vIiARTDA~~-------~~gldeAI~RakAy~e 251 (462)
=+=......-. ++-. + ++++++... + ....++|++-+-+.+ ....+++...|.+..-
T Consensus 82 pslln~~~~~~-----i~g~--~---~~a~~~~g~~~~~~e~i~~gYivv~p~s~~~~~~~a~~~~~~e~~~~~a~~a~~ 151 (228)
T 3vzx_A 82 PSVLNSKNADW-----IVGM--H---QKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSEL 151 (228)
T ss_dssp EEETTBSSGGG-----TTHH--H---HHHHHHHHHHHHHSCEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHH
T ss_pred eeecCCCCcch-----hhhH--H---HHHHHHcCCCCcccceeeeEEEEECCCCcceeeecccCCCCHHHHHHHHHHHHH
Confidence 66431111111 1111 1 122222221 1 111244454322211 1133555555555555
Q ss_pred cCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHHHHHHHHHHHHHHH
Q 012478 252 AGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVSVRAMQDALTAI 328 (462)
Q Consensus 252 AGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~aa~~Am~~~l~~l 328 (462)
.|-..|++++- .+.+.++++.+.+..+|+. +.+|=++| =..+++. .|+..|+.++.+..- ...+++..+++
T Consensus 152 ~g~~~VYld~sG~~~~~~~i~~i~~~~~~~Pv~---vGGGI~t~-e~a~~~~-~gAD~VVVGSa~v~~-p~~~~~~v~a~ 225 (228)
T 3vzx_A 152 LQLPIFYLEYSGVLGDIEAVKKTKAVLETSTLF---YGGGIKDA-ETAKQYA-EHADVIVVGNAVYED-FDRALKTVAAV 225 (228)
T ss_dssp TTCSEEEEECTTSCCCHHHHHHHHHHCSSSEEE---EESSCCSH-HHHHHHH-TTCSEEEECTHHHHC-HHHHHHHHHHH
T ss_pred cCCCEEEecCCCCcCCHHHHHHHHHhcCCCCEE---EeCCCCCH-HHHHHHH-hCCCEEEEChHHhcC-HHHHHHHHHHH
Confidence 56899999862 2577888988876335543 33322322 1234455 599999999987763 33344444444
Q ss_pred H
Q 012478 329 K 329 (462)
Q Consensus 329 ~ 329 (462)
+
T Consensus 226 ~ 226 (228)
T 3vzx_A 226 K 226 (228)
T ss_dssp H
T ss_pred h
Confidence 4
No 232
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=93.46 E-value=1.1 Score=45.37 Aligned_cols=134 Identities=16% Similarity=0.210 Sum_probs=84.6
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCC-----CCCCc-ccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhc
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGH-----TRGRK-VVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA 236 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH-----~~gk~-Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~ 236 (462)
++....+.++++.++|..+|+|--... ..-|. .++.. .-..++.+++|++++++. |+++.|.- |+...
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~-~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~---G~d~~l~v--Dan~~ 225 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAM-DRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAV---GPDVDIIA--EMHAF 225 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSB-CTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHH---CTTSEEEE--ECTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccccc-CCcCccccCcccCCCchhHHHHHHHHHHHHHHhc---CCCCEEEE--ECCCC
Confidence 677888888999999999999832100 00021 01100 012355677888877764 66776653 56566
Q ss_pred ccHHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHH---HHhcC-CCEEec
Q 012478 237 LSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELG-FKLVAY 309 (462)
Q Consensus 237 ~gldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~e---L~~lG-v~~V~y 309 (462)
..++++++-++++.+.|.+ |+|-+ .+.+.++++.+.++ +|+..+ +. ..+.++ +-+.| ++.|..
T Consensus 226 ~~~~~a~~~~~~l~~~~i~--~iE~P~~~~~~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~~~d~v~i 295 (407)
T 2o56_A 226 TDTTSAIQFGRMIEELGIF--YYEEPVMPLNPAQMKQVADKVN-IPLAAG-----ER--IYWRWGYRPFLENGSLSVIQP 295 (407)
T ss_dssp SCHHHHHHHHHHHGGGCCS--CEECSSCSSSHHHHHHHHHHCC-SCEEEC-----TT--CCHHHHHHHHHHTTCCSEECC
T ss_pred CCHHHHHHHHHHHHhcCCC--EEeCCCChhhHHHHHHHHHhCC-CCEEeC-----CC--cCCHHHHHHHHHcCCCCEEec
Confidence 7889999999999999877 45543 36788899988875 676532 21 124444 44445 677666
Q ss_pred cch
Q 012478 310 PLS 312 (462)
Q Consensus 310 p~~ 312 (462)
-..
T Consensus 296 k~~ 298 (407)
T 2o56_A 296 DIC 298 (407)
T ss_dssp CTT
T ss_pred Ccc
Confidence 443
No 233
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=93.45 E-value=0.94 Score=46.01 Aligned_cols=99 Identities=12% Similarity=0.063 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcc-cHHHHHH
Q 012478 166 NVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQAL-SLEESLR 244 (462)
Q Consensus 166 nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~-gldeAI~ 244 (462)
.+.+.++++.+.|...+|| + +.|+. ..+.++-+++|+|++++. |+++.|.. |+.... .+++|++
T Consensus 155 ~~~~~a~~~~~~G~~~~K~-~-----k~g~~----~~~~~~d~~~v~avR~a~---G~d~~l~v--Dan~~~~~~~~A~~ 219 (394)
T 3mqt_A 155 AYKPLIAKAKERGAKAVKV-C-----IIPND----KVSDKEIVAYLRELREVI---GWDMDMMV--DCLYRWTDWQKARW 219 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEE-E-----CCCCT----TSCHHHHHHHHHHHHHHH---CSSSEEEE--ECTTCCSCHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEe-c-----ccCCC----ccCHHHHHHHHHHHHHHh---CCCCeEEE--ECCCCCCCHHHHHH
Confidence 4556788888999999999 2 23321 124677788999888774 67776653 777777 8899999
Q ss_pred HHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceee
Q 012478 245 RSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMA 282 (462)
Q Consensus 245 RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~ 282 (462)
-++++.+.|.+.| |-+ .+.+.++++.+.++ +|+..
T Consensus 220 ~~~~L~~~~i~~i--EeP~~~~~~~~~~~l~~~~~-iPIa~ 257 (394)
T 3mqt_A 220 TFRQLEDIDLYFI--EACLQHDDLIGHQKLAAAIN-TRLCG 257 (394)
T ss_dssp HHHHTGGGCCSEE--ESCSCTTCHHHHHHHHHHSS-SEEEE
T ss_pred HHHHHhhcCCeEE--ECCCCcccHHHHHHHHhhCC-CCEEe
Confidence 9999999987754 433 36788899988875 67653
No 234
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=93.41 E-value=0.87 Score=46.12 Aligned_cols=136 Identities=14% Similarity=0.167 Sum_probs=85.1
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCC----------CCCc-ccCHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHT----------RGRK-VVSREEAVMRIKAAVDARKESGSDIVIVART 231 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~----------~gk~-Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiART 231 (462)
++....+.++++.++|..+|+|--... ..-|.. +|-. .-+.++.+++|++++++. |+++.|.-
T Consensus 150 ~~~~~~~~a~~~~~~Gf~~vKik~~~~-~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~---G~d~~l~v-- 223 (410)
T 2gl5_A 150 TPEEYAEAARAALDDGYDAIKVDPLEI-DRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAM---GDDADIIV-- 223 (410)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSB-CTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHH---CSSSEEEE--
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccc-CCcccccccccccccccCccchhHHHHHHHHHHHHHHhc---CCCCEEEE--
Confidence 677888888999999999999843100 000210 1100 013456678888887764 66776653
Q ss_pred chhhcccHHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCC-CCCHHHHHhcC-CCE
Q 012478 232 DSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTP-ILNPLELEELG-FKL 306 (462)
Q Consensus 232 DA~~~~gldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP-~ls~~eL~~lG-v~~ 306 (462)
|+.....++++++-++++.+.|.+ |+|-+ .+.+.++++.+.++ +|+..+ +..- .-..+++-+.| ++.
T Consensus 224 Dan~~~~~~~ai~~~~~l~~~~i~--~iE~P~~~~~~~~~~~l~~~~~-iPIa~d-----E~~~~~~~~~~~i~~~~~d~ 295 (410)
T 2gl5_A 224 EIHSLLGTNSAIQFAKAIEKYRIF--LYEEPIHPLNSDNMQKVSRSTT-IPIATG-----ERSYTRWGYRELLEKQSIAV 295 (410)
T ss_dssp ECTTCSCHHHHHHHHHHHGGGCEE--EEECSSCSSCHHHHHHHHHHCS-SCEEEC-----TTCCTTHHHHHHHHTTCCSE
T ss_pred ECCCCCCHHHHHHHHHHHHhcCCC--eEECCCChhhHHHHHHHHhhCC-CCEEec-----CCcCCHHHHHHHHHcCCCCE
Confidence 666667889999999999988654 66653 36788899988875 676533 2111 11334444555 677
Q ss_pred Eeccch
Q 012478 307 VAYPLS 312 (462)
Q Consensus 307 V~yp~~ 312 (462)
|..-..
T Consensus 296 v~ik~~ 301 (410)
T 2gl5_A 296 AQPDLC 301 (410)
T ss_dssp ECCCTT
T ss_pred EecCcc
Confidence 766443
No 235
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=93.41 E-value=0.37 Score=47.77 Aligned_cols=106 Identities=16% Similarity=0.218 Sum_probs=72.0
Q ss_pred HHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhh-cccHHHHHHHHH
Q 012478 169 RTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQ-ALSLEESLRRSR 247 (462)
Q Consensus 169 rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~-~~gldeAI~Rak 247 (462)
-..+.++++|+..|-.-|...--..||.+. ..++.+||+...++++.+.. ..+|++=+.--. ..+.+++++-+.
T Consensus 45 ~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt-~~vTldemi~h~~aV~r~~~----~~~vvaD~pfgsy~~s~~~a~~na~ 119 (281)
T 1oy0_A 45 STARIFDEAGIPVLLVGDSAANVVYGYDTT-VPISIDELIPLVRGVVRGAP----HALVVADLPFGSYEAGPTAALAAAT 119 (281)
T ss_dssp HHHHHHHTTTCCEEEECTTHHHHTTCCSSS-SSCCGGGTHHHHHHHHHHCT----TSEEEEECCTTSSTTCHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECHHHHHHHcCCCCC-CCCCHHHHHHHHHHHHhcCC----CCeEEEECCCCcccCCHHHHHHHHH
Confidence 345678889999998766543234577553 46788999999999887753 244445544311 235788888777
Q ss_pred HhHh-cCCcEEEecCC-CCHHHHHHHHHhCCCCcee
Q 012478 248 AFAD-AGADVLFIDAL-ASKEEMKAFCEISPLVPKM 281 (462)
Q Consensus 248 Ay~e-AGAD~Ifie~~-~s~eei~~i~~~v~~vP~~ 281 (462)
++.+ +||++|-+|+- .-.+.++.+++. ++|++
T Consensus 120 rl~~eaGa~aVklEdg~e~~~~I~al~~a--gIpV~ 153 (281)
T 1oy0_A 120 RFLKDGGAHAVKLEGGERVAEQIACLTAA--GIPVM 153 (281)
T ss_dssp HHHHTTCCSEEEEEBSGGGHHHHHHHHHH--TCCEE
T ss_pred HHHHHhCCeEEEECCcHHHHHHHHHHHHC--CCCEE
Confidence 7665 99999999985 335677777765 35554
No 236
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=93.37 E-value=1.1 Score=40.69 Aligned_cols=139 Identities=15% Similarity=0.098 Sum_probs=76.4
Q ss_pred HHHHHHhhc-CCcEEEeCCCCCCC-HHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHH
Q 012478 141 QGQLITQAV-SIPVIGDGDNGYGN-AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDAR 218 (462)
Q Consensus 141 ~~~~I~ra~-~iPVIaD~DtGyG~-~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar 218 (462)
.++.+.+.+ +.|+++|+=. .| +.. .++.+.++||++|++-+.. + ++.+.. +++..
T Consensus 43 ~i~~l~~~~~~~~i~~~l~~--~di~~~---~~~~a~~~Gad~v~vh~~~---------~------~~~~~~---~~~~~ 99 (207)
T 3ajx_A 43 VITAVKKAHPDKIVFADMKT--MDAGEL---EADIAFKAGADLVTVLGSA---------D------DSTIAG---AVKAA 99 (207)
T ss_dssp HHHHHHHHSTTSEEEEEEEE--CSCHHH---HHHHHHHTTCSEEEEETTS---------C------HHHHHH---HHHHH
T ss_pred HHHHHHHhCCCCeEEEEEEe--cCccHH---HHHHHHhCCCCEEEEeccC---------C------hHHHHH---HHHHH
Confidence 455566655 7899888753 35 332 2578889999999764331 0 122222 22222
Q ss_pred HhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEE-EecCC-------CCH-HHHHHHHHhCCCCceeeeeeecCC
Q 012478 219 KESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVL-FIDAL-------ASK-EEMKAFCEISPLVPKMANMLEGGG 289 (462)
Q Consensus 219 ~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~I-fie~~-------~s~-eei~~i~~~v~~vP~~~N~l~~~g 289 (462)
++.|..+.+ .= ......++ +++.+.+.|+|.| +..+. .-. +.++++++. .+|+. ..||
T Consensus 100 ~~~g~~~gv-~~---~s~~~p~~---~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~~i~~~~~~--~~pi~----v~GG 166 (207)
T 3ajx_A 100 QAHNKGVVV-DL---IGIEDKAT---RAQEVRALGAKFVEMHAGLDEQAKPGFDLNGLLAAGEKA--RVPFS----VAGG 166 (207)
T ss_dssp HHHTCEEEE-EC---TTCSSHHH---HHHHHHHTTCSEEEEECCHHHHTSTTCCTHHHHHHHHHH--TSCEE----EESS
T ss_pred HHcCCceEE-EE---ecCCChHH---HHHHHHHhCCCEEEEEecccccccCCCchHHHHHHhhCC--CCCEE----EECC
Confidence 222333211 11 11112233 4555566799999 65432 111 455555542 23432 2235
Q ss_pred CCCCCCHHHHHhcCCCEEeccchHHHH
Q 012478 290 KTPILNPLELEELGFKLVAYPLSLIGV 316 (462)
Q Consensus 290 ~tP~ls~~eL~~lGv~~V~yp~~ll~a 316 (462)
-+|. +++++.+.|...++.+..++.+
T Consensus 167 I~~~-~~~~~~~aGad~vvvGsaI~~~ 192 (207)
T 3ajx_A 167 VKVA-TIPAVQKAGAEVAVAGGAIYGA 192 (207)
T ss_dssp CCGG-GHHHHHHTTCSEEEESHHHHTS
T ss_pred cCHH-HHHHHHHcCCCEEEEeeeccCC
Confidence 4442 7888899999999999887764
No 237
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=93.36 E-value=0.25 Score=50.32 Aligned_cols=85 Identities=15% Similarity=0.030 Sum_probs=56.3
Q ss_pred CCceEecccCChHHHHHHHHhCCcEEEecc-HHHHh-----hhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCC
Q 012478 88 PGVHQGPACFDALSAKLVEKSGFSFCFTSG-FSISA-----ARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGY 161 (462)
Q Consensus 88 ~~~iv~p~ayDalSArl~e~aGfdaI~vSG-~avSa-----s~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGy 161 (462)
+-+++++++.+.-.|+.++++|+|+|.+|+ .+... ..+|.|+ -+.+..+..+++..++|||+|. |.
T Consensus 194 ~~pviv~~v~~~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~------~~~l~~v~~~~~~~~ipVia~G--GI 265 (404)
T 1eep_A 194 NLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQ------ITAICDVYEACNNTNICIIADG--GI 265 (404)
T ss_dssp TCEEEEEEECSHHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCH------HHHHHHHHHHHTTSSCEEEEES--CC
T ss_pred CCeEEEcCCCcHHHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcch------HHHHHHHHHHHhhcCceEEEEC--CC
Confidence 346666789999999999999999999952 11100 1124443 2445555556566789999984 33
Q ss_pred CCHHHHHHHHHHHHHhCccEEEe
Q 012478 162 GNAMNVKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 162 G~~~nv~rtVk~l~~AGaaGI~I 184 (462)
.+..++. ++..+||++|.+
T Consensus 266 ~~~~d~~----~ala~GAd~V~i 284 (404)
T 1eep_A 266 RFSGDVV----KAIAAGADSVMI 284 (404)
T ss_dssp CSHHHHH----HHHHHTCSEEEE
T ss_pred CCHHHHH----HHHHcCCCHHhh
Confidence 4555555 344579999999
No 238
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=93.34 E-value=2.3 Score=43.29 Aligned_cols=126 Identities=15% Similarity=0.181 Sum_probs=87.5
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhC-CCeEEEEecchhhccc
Q 012478 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESG-SDIVIVARTDSRQALS 238 (462)
Q Consensus 160 GyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g-~d~vIiARTDA~~~~g 238 (462)
|.++++.+.+.++.+.+.|...+||- .|. .+.++-+++|++++++. | +++.| +.|+.....
T Consensus 161 ~~~~~e~~~~~a~~~~~~G~~~~KlK-------vg~------~~~~~d~~~v~avR~a~---gg~~~~L--~vDaN~~w~ 222 (391)
T 4e8g_A 161 GIGQPDEIARIAAEKVAEGFPRLQIK-------IGG------RPVEIDIETVRKVWERI---RGTGTRL--AVDGNRSLP 222 (391)
T ss_dssp CSCCHHHHHHHHHHHHHTTCSEEEEE-------CCS------SCHHHHHHHHHHHHHHH---TTTTCEE--EEECTTCCC
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEc-------CCC------CCHHHHHHHHHHHHHHh---CCCCCeE--EEeCCCCCC
Confidence 45678888888999999999999993 222 13566688888887764 4 56554 458877888
Q ss_pred HHHHHHHHHHhHhcCCcEEEecCC-CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHH---HHhcC-CCEEeccchH
Q 012478 239 LEESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELG-FKLVAYPLSL 313 (462)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~e---L~~lG-v~~V~yp~~l 313 (462)
.++|++.++++.+. +. |+|-+ .+.+.++++.+..+ +|+..+ .. ..+..+ +-+.| ++.+..-..-
T Consensus 223 ~~~A~~~~~~L~~~--~i-~iEeP~~~~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~~~~~a~d~v~ik~~~ 291 (391)
T 4e8g_A 223 SRDALRLSRECPEI--PF-VLEQPCNTLEEIAAIRGRVQ-HGIYLD-----ES--GEDLSTVIRAAGQGLCDGFGMKLTR 291 (391)
T ss_dssp HHHHHHHHHHCTTS--CE-EEESCSSSHHHHHHHGGGCC-SCEEES-----TT--CCSHHHHHHHHHTTCCSEEEEEHHH
T ss_pred HHHHHHHHHHHhhc--Ce-EEecCCccHHHHHHHHhhCC-CCEEeC-----CC--CCCHHHHHHHHHcCCCCEEEeCccc
Confidence 99999999999887 45 78765 56788888888775 676543 11 234544 44446 6666554443
Q ss_pred H
Q 012478 314 I 314 (462)
Q Consensus 314 l 314 (462)
.
T Consensus 292 ~ 292 (391)
T 4e8g_A 292 I 292 (391)
T ss_dssp H
T ss_pred c
Confidence 3
No 239
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=93.33 E-value=1.2 Score=44.87 Aligned_cols=159 Identities=11% Similarity=0.058 Sum_probs=89.1
Q ss_pred HHHHHHHHhCCcEEEec---cHHHHhhh----ccCCCCCCCCHHH----HHHHHHHHHhhc--CCcEEEeCCCC-C---C
Q 012478 100 LSAKLVEKSGFSFCFTS---GFSISAAR----LALPDTGFISYGE----MVDQGQLITQAV--SIPVIGDGDNG-Y---G 162 (462)
Q Consensus 100 lSArl~e~aGfdaI~vS---G~avSas~----lG~PD~g~vsl~E----ml~~~~~I~ra~--~iPVIaD~DtG-y---G 162 (462)
-.|+.+.++|||+|=+- |+-+.-.. .-.-|.---+++. +++.++.|.+++ +.||.+-+--. | |
T Consensus 162 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G 241 (363)
T 3l5l_A 162 DAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRD 241 (363)
T ss_dssp HHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCH
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCC
Confidence 46788889999999876 33332110 0112321124553 355666676666 47888755321 1 2
Q ss_pred -C-HHHHHHHHHHHHHhCccEEEeCCCC-CCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccH
Q 012478 163 -N-AMNVKRTVKGYIKAGFAGIILEDQV-SPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (462)
Q Consensus 163 -~-~~nv~rtVk~l~~AGaaGI~IEDq~-~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gl 239 (462)
. ..+..+.++.++++|++.|++-... .+.. ....+ +-.. -+++.+|+.++ +..++.+++...
T Consensus 242 ~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~-~~~~~-~~~~-~~~~~~ir~~~------~iPVi~~GgI~s------ 306 (363)
T 3l5l_A 242 EQTLEESIELARRFKAGGLDLLSVSVGFTIPDT-NIPWG-PAFM-GPIAERVRREA------KLPVTSAWGFGT------ 306 (363)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCC-CCCCC-TTTT-HHHHHHHHHHH------TCCEEECSSTTS------
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCcccccc-ccCCC-cchh-HHHHHHHHHHc------CCcEEEeCCCCC------
Confidence 2 3577888999999999999997642 1100 00001 1111 23455554432 245666555321
Q ss_pred HHHHHHHHHhHhcC-CcEEEec--CCCCHHHHHHHHHhCC
Q 012478 240 EESLRRSRAFADAG-ADVLFID--ALASKEEMKAFCEISP 276 (462)
Q Consensus 240 deAI~RakAy~eAG-AD~Ifie--~~~s~eei~~i~~~v~ 276 (462)
.+.+..+.+.| ||+|.+- .+.+++..+++.+.+.
T Consensus 307 ---~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~lg 343 (363)
T 3l5l_A 307 ---PQLAEAALQANQLDLVSVGRAHLADPHWAYFAAKELG 343 (363)
T ss_dssp ---HHHHHHHHHTTSCSEEECCHHHHHCTTHHHHHHHHTT
T ss_pred ---HHHHHHHHHCCCccEEEecHHHHhCchHHHHHHHHcC
Confidence 23566677788 9999873 2345567777777653
No 240
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=93.32 E-value=0.25 Score=50.25 Aligned_cols=82 Identities=21% Similarity=0.090 Sum_probs=55.4
Q ss_pred CCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhc--CCcEEEeCCCCCCCHH
Q 012478 88 PGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV--SIPVIGDGDNGYGNAM 165 (462)
Q Consensus 88 ~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~--~iPVIaD~DtGyG~~~ 165 (462)
+.++++-++-+.-.|+.++++|+|+|.+++.+-. ..|.+..+++- +.. |++.+ ++|||+|..- -+..
T Consensus 217 ~~PvivK~v~~~e~A~~a~~~GaD~I~vsn~GG~-----~~d~~~~~~~~-L~~---i~~av~~~ipVia~GGI--~~g~ 285 (352)
T 3sgz_A 217 RLPIILKGILTKEDAELAMKHNVQGIVVSNHGGR-----QLDEVSASIDA-LRE---VVAAVKGKIEVYMDGGV--RTGT 285 (352)
T ss_dssp CSCEEEEEECSHHHHHHHHHTTCSEEEECCGGGT-----SSCSSCCHHHH-HHH---HHHHHTTSSEEEEESSC--CSHH
T ss_pred CCCEEEEecCcHHHHHHHHHcCCCEEEEeCCCCC-----ccCCCccHHHH-HHH---HHHHhCCCCeEEEECCC--CCHH
Confidence 5688888888889999999999999999975411 23544443333 322 33333 6999999533 3444
Q ss_pred HHHHHHHHHHHhCccEEEe
Q 012478 166 NVKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 166 nv~rtVk~l~~AGaaGI~I 184 (462)
++. |. ..+||++|.|
T Consensus 286 Dv~---ka-LalGA~aV~i 300 (352)
T 3sgz_A 286 DVL---KA-LALGARCIFL 300 (352)
T ss_dssp HHH---HH-HHTTCSEEEE
T ss_pred HHH---HH-HHcCCCEEEE
Confidence 454 33 3589999999
No 241
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=93.31 E-value=0.26 Score=51.34 Aligned_cols=90 Identities=12% Similarity=0.073 Sum_probs=58.1
Q ss_pred CCceEecccCChHHHHHHHHhCCcEEEeccHHHH-hhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHH
Q 012478 88 PGVHQGPACFDALSAKLVEKSGFSFCFTSGFSIS-AARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMN 166 (462)
Q Consensus 88 ~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avS-as~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~n 166 (462)
+-++++.++.+.-.|+.++++|+|+|.+|+.+-+ ....-..+. ..+.-+.+..+...++..++|||+|. |..+..+
T Consensus 278 ~~pvi~g~~~t~e~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~-g~p~~~~l~~v~~~~~~~~ipvia~G--GI~~~~d 354 (494)
T 1vrd_A 278 DLPVVAGNVATPEGTEALIKAGADAVKVGVGPGSICTTRVVAGV-GVPQLTAVMECSEVARKYDVPIIADG--GIRYSGD 354 (494)
T ss_dssp TSCEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCC-CCCHHHHHHHHHHHHHTTTCCEEEES--CCCSHHH
T ss_pred CceEEeCCcCCHHHHHHHHHcCCCEEEEcCCCCccccccccCCC-CccHHHHHHHHHHHHhhcCCCEEEEC--CcCCHHH
Confidence 3466778899999999999999999999732100 000001111 23344555566666666789999994 4445555
Q ss_pred HHHHHHHHHHhCccEEEe
Q 012478 167 VKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 167 v~rtVk~l~~AGaaGI~I 184 (462)
+. ++..+||++|.+
T Consensus 355 i~----kala~GAd~V~i 368 (494)
T 1vrd_A 355 IV----KALAAGAESVMV 368 (494)
T ss_dssp HH----HHHHTTCSEEEE
T ss_pred HH----HHHHcCCCEEEE
Confidence 55 444689999998
No 242
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=93.30 E-value=0.89 Score=45.94 Aligned_cols=140 Identities=14% Similarity=0.178 Sum_probs=86.6
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCC-----CCCc-ccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhc
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHT-----RGRK-VVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA 236 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~-----~gk~-Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~ 236 (462)
++....+.++++.++|..+|+|--... ...|.. +|.. .-+.++.+++|++++++. |+++.|. .|+...
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~-~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~av---G~d~~l~--vDan~~ 219 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAH-DRNGSREGVFLEGPLPSETIKIGVERVEAIRNAV---GPDVDII--VENHGH 219 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSS-CTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHH---CTTSEEE--EECTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccc-CCccccccCcccCCCchHHHHHHHHHHHHHHHHh---CCCCeEE--EECCCC
Confidence 677888888999999999999852100 000110 1111 112355677888777764 6677665 366666
Q ss_pred ccHHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHH---HhcC-CCEEec
Q 012478 237 LSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLEL---EELG-FKLVAY 309 (462)
Q Consensus 237 ~gldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL---~~lG-v~~V~y 309 (462)
..++++++-++++.+.|.+ |+|-+ .+.+.++++.+.++ +|+..+ +. ..+.+++ -+.| ++.|..
T Consensus 220 ~~~~~ai~~~~~l~~~~i~--~iE~P~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~~~d~v~i 289 (403)
T 2ox4_A 220 TDLVSAIQFAKAIEEFNIF--FYEEINTPLNPRLLKEAKKKID-IPLASG-----ER--IYSRWGFLPFLEDRSIDVIQP 289 (403)
T ss_dssp SCHHHHHHHHHHHGGGCEE--EEECCSCTTSTHHHHHHHHTCC-SCEEEC-----TT--CCHHHHHHHHHHTTCCSEECC
T ss_pred CCHHHHHHHHHHHHhhCCC--EEeCCCChhhHHHHHHHHHhCC-CCEEec-----CC--cCCHHHHHHHHHcCCCCEEec
Confidence 7899999999999988654 66654 25678888888775 676532 22 1244444 3445 677766
Q ss_pred cchHHHHHH
Q 012478 310 PLSLIGVSV 318 (462)
Q Consensus 310 p~~ll~aa~ 318 (462)
-..-..-..
T Consensus 290 k~~~~GGit 298 (403)
T 2ox4_A 290 DLGTCGGFT 298 (403)
T ss_dssp CHHHHTHHH
T ss_pred CccccCCHH
Confidence 444333333
No 243
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=93.29 E-value=1.2 Score=46.05 Aligned_cols=134 Identities=18% Similarity=0.173 Sum_probs=74.5
Q ss_pred ecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEE-eCCCCCCCHHHHHHHH
Q 012478 93 GPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIG-DGDNGYGNAMNVKRTV 171 (462)
Q Consensus 93 ~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIa-D~DtGyG~~~nv~rtV 171 (462)
+.+..|.-.++.+.++|.|.|.+.+ ..|.| ..+.+.++.+.+..++||++ .. .+ .+.+
T Consensus 140 ~v~~~~~e~~~~lveaGvdvIvldt------a~G~~-------~~~~e~I~~ik~~~~i~Vi~g~V----~t----~e~A 198 (400)
T 3ffs_A 140 AIGVNEIERAKLLVEAGVDVIVLDS------AHGHS-------LNIIRTLKEIKSKMNIDVIVGNV----VT----EEAT 198 (400)
T ss_dssp EECCC-CHHHHHHHHHTCSEEEECC------SCCSB-------HHHHHHHHHHHTTCCCEEEEEEE----CS----HHHH
T ss_pred ecCCCHHHHHHHHHHcCCCEEEEeC------CCCCc-------ccHHHHHHHHHhcCCCeEEEeec----CC----HHHH
Confidence 4455666677888889999998752 13544 34556677777777899997 32 12 3455
Q ss_pred HHHHHhCccEEEeCCCCCC-CCCCCCCCC-cccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHh
Q 012478 172 KGYIKAGFAGIILEDQVSP-KGCGHTRGR-KVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAF 249 (462)
Q Consensus 172 k~l~~AGaaGI~IEDq~~P-KrCGH~~gk-~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy 249 (462)
+.++++||++|.+ . ..| -.|+..... .-+|.-+.+..+..+ .+. .++-|+|=-.-.. -+.+.++
T Consensus 199 ~~a~~aGAD~I~v-G-~g~Gs~~~tr~~~g~g~p~~~al~~v~~~---~~~--~~IPVIA~GGI~~-------~~di~ka 264 (400)
T 3ffs_A 199 KELIENGADGIKV-G-IGPGSICTTRIVAGVGVPQITAIEKCSSV---ASK--FGIPIIADGGIRY-------SGDIGKA 264 (400)
T ss_dssp HHHHHTTCSEEEE-C-C---------CCSCBCCCHHHHHHHHHHH---HTT--TTCCEEEESCCCS-------HHHHHHH
T ss_pred HHHHHcCCCEEEE-e-CCCCcCcccccccccchhHHHHHHHHHHH---HHh--cCCCEEecCCCCC-------HHHHHHH
Confidence 7888999999999 3 211 123211100 114554444444333 222 3455665322111 1235566
Q ss_pred HhcCCcEEEecC
Q 012478 250 ADAGADVLFIDA 261 (462)
Q Consensus 250 ~eAGAD~Ifie~ 261 (462)
.++|||+|.+-.
T Consensus 265 lalGAd~V~vGt 276 (400)
T 3ffs_A 265 LAVGASSVMIGS 276 (400)
T ss_dssp HTTTCSEEEECG
T ss_pred HHcCCCEEEECh
Confidence 678999999843
No 244
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=93.25 E-value=0.58 Score=47.44 Aligned_cols=137 Identities=14% Similarity=0.078 Sum_probs=90.1
Q ss_pred CCcEEEeCCCC-CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCH-HHHHHHHHHHHHHHHhhCCCeEE
Q 012478 150 SIPVIGDGDNG-YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSR-EEAVMRIKAAVDARKESGSDIVI 227 (462)
Q Consensus 150 ~iPVIaD~DtG-yG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~-ee~~~kI~AA~~Ar~~~g~d~vI 227 (462)
.+|+.+- .+ .+++....+.++++.++|..+|+|-- |. .++ +. ++.+++|++++++. |+++.|
T Consensus 133 ~vp~~~~--~~~~~~~~~~~~~a~~~~~~Gf~~iKik~------sp-vG~----~~~~~~~e~v~avr~a~---G~d~~l 196 (401)
T 2hzg_A 133 GKRPYAS--LLFGDTPQETLERARAARRDGFAAVKFGW------GP-IGR----GTVAADADQIMAAREGL---GPDGDL 196 (401)
T ss_dssp CBEEEEE--EECCSSHHHHHHHHHHHHHTTCSEEEEES------TT-TTS----SCHHHHHHHHHHHHHHH---CSSSEE
T ss_pred ceEeeEE--cCCCCCHHHHHHHHHHHHHhCCCeEEEcC------CC-CCC----CHHHHHHHHHHHHHHHh---CCCCeE
Confidence 3676542 22 24677888888999999999999831 21 121 23 55678888887764 567665
Q ss_pred EEecchhhcc--cHHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHH-hCCCCceeeeeeecCCCCCCCCHHHHH-
Q 012478 228 VARTDSRQAL--SLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCE-ISPLVPKMANMLEGGGKTPILNPLELE- 300 (462)
Q Consensus 228 iARTDA~~~~--gldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~-~v~~vP~~~N~l~~~g~tP~ls~~eL~- 300 (462)
. .|+.... .++++++-++++.+.|.+. +|-+ .+.+.++++.+ .++ +|+..+ +. ..+.+++.
T Consensus 197 ~--vDan~~~~~~~~~a~~~~~~l~~~~i~~--iEqP~~~~d~~~~~~l~~~~~~-iPI~~d-----E~--~~~~~~~~~ 264 (401)
T 2hzg_A 197 M--VDVGQIFGEDVEAAAARLPTLDAAGVLW--LEEPFDAGALAAHAALAGRGAR-VRIAGG-----EA--AHNFHMAQH 264 (401)
T ss_dssp E--EECTTTTTTCHHHHHTTHHHHHHTTCSE--EECCSCTTCHHHHHHHHTTCCS-SEEEEC-----TT--CSSHHHHHH
T ss_pred E--EECCCCCCCCHHHHHHHHHHHHhcCCCE--EECCCCccCHHHHHHHHhhCCC-CCEEec-----CC--cCCHHHHHH
Confidence 5 3666677 8899999999999999885 4543 36778888887 664 565532 22 23444443
Q ss_pred --hcC-CCEEeccchHH
Q 012478 301 --ELG-FKLVAYPLSLI 314 (462)
Q Consensus 301 --~lG-v~~V~yp~~ll 314 (462)
+.| ++.|..-..-.
T Consensus 265 ~i~~~~~d~v~ik~~~~ 281 (401)
T 2hzg_A 265 LMDYGRIGFIQIDCGRI 281 (401)
T ss_dssp HHHHSCCSEEEECHHHH
T ss_pred HHHCCCCCEEEeCcchh
Confidence 334 78777755443
No 245
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=93.19 E-value=1.1 Score=47.05 Aligned_cols=64 Identities=19% Similarity=0.221 Sum_probs=45.1
Q ss_pred HHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhc-CCcEEE-eCCCCCCCHHHHHHHHHHHHHh
Q 012478 100 LSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV-SIPVIG-DGDNGYGNAMNVKRTVKGYIKA 177 (462)
Q Consensus 100 lSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~-~iPVIa-D~DtGyG~~~nv~rtVk~l~~A 177 (462)
-.|..+.++|+++|.+... +|+| ...++.++.|.+.+ ++||++ +. .+ .+.++.++++
T Consensus 258 ~~a~~~~~aG~d~v~i~~~------~G~~-------~~~~~~i~~i~~~~~~~pvi~~~v----~t----~~~a~~l~~a 316 (514)
T 1jcn_A 258 YRLDLLTQAGVDVIVLDSS------QGNS-------VYQIAMVHYIKQKYPHLQVIGGNV----VT----AAQAKNLIDA 316 (514)
T ss_dssp HHHHHHHHTTCSEEEECCS------CCCS-------HHHHHHHHHHHHHCTTCEEEEEEE----CS----HHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeecc------CCcc-------hhHHHHHHHHHHhCCCCceEeccc----ch----HHHHHHHHHc
Confidence 3456667799999998541 3655 23456677777777 799997 33 12 3446788899
Q ss_pred CccEEEe
Q 012478 178 GFAGIIL 184 (462)
Q Consensus 178 GaaGI~I 184 (462)
||++|++
T Consensus 317 Gad~I~v 323 (514)
T 1jcn_A 317 GVDGLRV 323 (514)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9999999
No 246
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=93.18 E-value=0.23 Score=49.46 Aligned_cols=93 Identities=14% Similarity=0.097 Sum_probs=57.7
Q ss_pred HHHHHHhC-CCceEecc-cCChHHHHHHHHhCCcEEEeccHH-----H-HhhhccCCCCCCCCHHHHHHHHHHHHhhcCC
Q 012478 80 SLRQILEL-PGVHQGPA-CFDALSAKLVEKSGFSFCFTSGFS-----I-SAARLALPDTGFISYGEMVDQGQLITQAVSI 151 (462)
Q Consensus 80 ~LR~ll~~-~~~iv~p~-ayDalSArl~e~aGfdaI~vSG~a-----v-Sas~lG~PD~g~vsl~Eml~~~~~I~ra~~i 151 (462)
.++++.+. +.++++.| +-+.-.|+.++++|+|+|.+|+.+ . .....|.|. . .+..+..|++.+++
T Consensus 139 ~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g---~----~~~~l~~v~~~~~i 211 (336)
T 1ypf_A 139 MIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGG---W----QLAALRWCAKAASK 211 (336)
T ss_dssp HHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTT---C----HHHHHHHHHHTCSS
T ss_pred HHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEecCCCceeecccccCcCCch---h----HHHHHHHHHHHcCC
Confidence 34444433 24555555 888999999999999999997322 0 001123331 1 23455666677799
Q ss_pred cEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeC
Q 012478 152 PVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILE 185 (462)
Q Consensus 152 PVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IE 185 (462)
|||+|..-. +..++. ++..+||++|.|=
T Consensus 212 pVIa~GGI~--~g~Dv~----kalalGAdaV~iG 239 (336)
T 1ypf_A 212 PIIADGGIR--TNGDVA----KSIRFGATMVMIG 239 (336)
T ss_dssp CEEEESCCC--STHHHH----HHHHTTCSEEEES
T ss_pred cEEEeCCCC--CHHHHH----HHHHcCCCEEEeC
Confidence 999995443 333444 3335799999993
No 247
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=92.99 E-value=1.2 Score=44.21 Aligned_cols=139 Identities=17% Similarity=0.107 Sum_probs=80.9
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCC-CCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 012478 153 VIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHT-RGRKVVSREEAVMRIKAAVDARKESGSDIVIVART 231 (462)
Q Consensus 153 VIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~-~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiART 231 (462)
.+++.|.|......-..-++..++.||+-|-+==.. |.. .| ..+.+.+-|++++++... +.+.+|--|
T Consensus 114 tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmVINi-----g~lk~g----~~~~v~~eI~~V~~a~~~--~~lKVIlEt 182 (288)
T 3oa3_A 114 CVIGFHEGTYSTDQKVSEAKRAMQNGASELDMVMNY-----PWLSEK----RYTDVFQDIRAVRLAAKD--AILKVILET 182 (288)
T ss_dssp EEESTTTSCSCHHHHHHHHHHHHHTTCSEEEEECCH-----HHHHTT----CHHHHHHHHHHHHHHTTT--SEEEEECCG
T ss_pred EEeCCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeeh-----hhhcCC----cHHHHHHHHHHHHHHhcC--CCceEEEEC
Confidence 457788887666544455778889999988541111 110 01 236778888888888652 336666555
Q ss_pred chhhcccHHHHHHHHHHhHhcCCcEEEec-----CCCCHHH---HHHHHHhCC-CCceeeeeeecCCCCCCCCHHHHHhc
Q 012478 232 DSRQALSLEESLRRSRAFADAGADVLFID-----ALASKEE---MKAFCEISP-LVPKMANMLEGGGKTPILNPLELEEL 302 (462)
Q Consensus 232 DA~~~~gldeAI~RakAy~eAGAD~Ifie-----~~~s~ee---i~~i~~~v~-~vP~~~N~l~~~g~tP~ls~~eL~~l 302 (462)
+.+ .-+|.+.-|+...+||||.|=-- +-.+.+. |+++++.+. .+++- ..||-+++ -...++-++
T Consensus 183 ~~L---t~eei~~A~~ia~eaGADfVKTSTGf~~~GAT~edv~lmr~~v~~~g~~v~VK---AAGGIrt~-edAl~mi~a 255 (288)
T 3oa3_A 183 SQL---TADEIIAGCVLSSLAGADYVKTSTGFNGPGASIENVSLMSAVCDSLQSETRVK---ASGGIRTI-EDCVKMVRA 255 (288)
T ss_dssp GGC---CHHHHHHHHHHHHHTTCSEEECCCSSSSCCCCHHHHHHHHHHHHHSSSCCEEE---EESSCCSH-HHHHHHHHT
T ss_pred CCC---CHHHHHHHHHHHHHcCCCEEEcCCCCCCCCCCHHHHHHHHHHHHHhCCCceEE---EeCCCCCH-HHHHHHHHc
Confidence 543 34666666888889999999532 2234444 444443222 23322 23322332 245667788
Q ss_pred CCCEEec
Q 012478 303 GFKLVAY 309 (462)
Q Consensus 303 Gv~~V~y 309 (462)
|..|+=.
T Consensus 256 GA~RiGt 262 (288)
T 3oa3_A 256 GAERLGA 262 (288)
T ss_dssp TCSEEEE
T ss_pred CCceeeh
Confidence 9998743
No 248
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=92.88 E-value=0.24 Score=48.87 Aligned_cols=192 Identities=16% Similarity=0.156 Sum_probs=105.6
Q ss_pred ccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHH
Q 012478 95 ACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGY 174 (462)
Q Consensus 95 ~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l 174 (462)
+.-|....+++.+.|+..+++....+. .+++++. + ..+.+....+.|+++=+= | .++....+.++.+
T Consensus 14 ~~t~~~~r~~~~~~G~gli~te~~~~~--~~~~~~~------~---~~~~l~~~~~~~~~~QL~-g-~~~~~~~~aa~~a 80 (318)
T 1vhn_A 14 GYTDSAFRTLAFEWGADFAFSEMVSAK--GFLMNSQ------K---TEELLPQPHERNVAVQIF-G-SEPNELSEAARIL 80 (318)
T ss_dssp TTCSHHHHHHHHTTTCCCEECSCEEHH--HHHTTCH------H---HHHHSCCTTCTTEEEEEE-C-SCHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHCcCEEEeCCEEEc--ccccCCH------h---HHHhhhCcCCCeEEEEeC-C-CCHHHHHHHHHHH
Confidence 333555666677789866665543332 2455431 1 122333344688887764 2 2577888899999
Q ss_pred HHhCccEEEeCCCCC-CCCCCCCCCCccc-CHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhc
Q 012478 175 IKAGFAGIILEDQVS-PKGCGHTRGRKVV-SREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADA 252 (462)
Q Consensus 175 ~~AGaaGI~IEDq~~-PKrCGH~~gk~Lv-p~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eA 252 (462)
+++ ++||.|--... ++++....|-.+. ..+...+-|++++++. ++.|..|.-. ....++.++-++.+.++
T Consensus 81 ~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~-----~~pv~vKir~--G~~~~~~~~~a~~l~~~ 152 (318)
T 1vhn_A 81 SEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSV-----SGKFSVKTRL--GWEKNEVEEIYRILVEE 152 (318)
T ss_dssp TTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHC-----SSEEEEEEES--CSSSCCHHHHHHHHHHT
T ss_pred HHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhh-----CCCEEEEecC--CCChHHHHHHHHHHHHh
Confidence 999 99999976531 1111111122232 4454555555555442 3445555322 11112345778999999
Q ss_pred CCcEEEecCCC---------CHHHHHHHHHhCCCCceeeeeeecCCC-CCCCCHHHH-HhcCCCEEeccchHHH
Q 012478 253 GADVLFIDALA---------SKEEMKAFCEISPLVPKMANMLEGGGK-TPILNPLEL-EELGFKLVAYPLSLIG 315 (462)
Q Consensus 253 GAD~Ifie~~~---------s~eei~~i~~~v~~vP~~~N~l~~~g~-tP~ls~~eL-~~lGv~~V~yp~~ll~ 315 (462)
|+|.|.+++-. +.+.++++.+ .+|+++| ||- ++ -+..++ ++.|++.|.++-.++.
T Consensus 153 G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~---~ipVi~~----GgI~s~-~da~~~l~~~gad~V~iGR~~l~ 218 (318)
T 1vhn_A 153 GVDEVFIHTRTVVQSFTGRAEWKALSVLEK---RIPTFVS----GDIFTP-EDAKRALEESGCDGLLVARGAIG 218 (318)
T ss_dssp TCCEEEEESSCTTTTTSSCCCGGGGGGSCC---SSCEEEE----SSCCSH-HHHHHHHHHHCCSEEEESGGGTT
T ss_pred CCCEEEEcCCCccccCCCCcCHHHHHHHHc---CCeEEEE----CCcCCH-HHHHHHHHcCCCCEEEECHHHHh
Confidence 99999987532 1222233323 3566554 342 22 123333 4479999999877553
No 249
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=92.87 E-value=4.3 Score=40.73 Aligned_cols=122 Identities=13% Similarity=0.204 Sum_probs=84.8
Q ss_pred CHHHHHHHHHHHHHh-CccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHH
Q 012478 163 NAMNVKRTVKGYIKA-GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEE 241 (462)
Q Consensus 163 ~~~nv~rtVk~l~~A-GaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~glde 241 (462)
++..+.+.++.+.+. |...+||- .|.. +.++-+++|++++++. |+++.+ +.|+......++
T Consensus 151 ~~~~~~~~a~~~~~~~G~~~~K~K-------vg~~------~~~~d~~~v~avR~~~---g~~~~l--~vDan~~~~~~~ 212 (372)
T 3tj4_A 151 TLEDLLAGSARAVEEDGFTRLKIK-------VGHD------DPNIDIARLTAVRERV---DSAVRI--AIDGNGKWDLPT 212 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEE-------CCCS------SHHHHHHHHHHHHHHS---CTTCEE--EEECTTCCCHHH
T ss_pred CHHHHHHHHHHHHHccCCCEEEEc-------CCCC------CHHHHHHHHHHHHHHc---CCCCcE--EeeCCCCCCHHH
Confidence 677888888888888 99999993 2221 3466688888887764 567766 447777778999
Q ss_pred HHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHh---cC-CCEEeccch
Q 012478 242 SLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE---LG-FKLVAYPLS 312 (462)
Q Consensus 242 AI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~---lG-v~~V~yp~~ 312 (462)
|++.++++.+.| ..|+|-+ .+.+.++++.+.++ +|+.++ .. ..+..++.+ .| ++.+..-..
T Consensus 213 a~~~~~~l~~~~--i~~iEqP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~~~d~v~~k~~ 280 (372)
T 3tj4_A 213 CQRFCAAAKDLD--IYWFEEPLWYDDVTSHARLARNTS-IPIALG-----EQ--LYTVDAFRSFIDAGAVAYVQPDVT 280 (372)
T ss_dssp HHHHHHHTTTSC--EEEEESCSCTTCHHHHHHHHHHCS-SCEEEC-----TT--CCSHHHHHHHHHTTCCSEECCCTT
T ss_pred HHHHHHHHhhcC--CCEEECCCCchhHHHHHHHHhhcC-CCEEeC-----CC--ccCHHHHHHHHHcCCCCEEEeCcc
Confidence 999999998875 5577764 25778888888875 676543 21 235555444 45 666665443
No 250
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=92.86 E-value=1.7 Score=43.99 Aligned_cols=150 Identities=19% Similarity=0.101 Sum_probs=95.4
Q ss_pred ccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHH---hhcCCcEEEeC---CCCC---CC--
Q 012478 95 ACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLIT---QAVSIPVIGDG---DNGY---GN-- 163 (462)
Q Consensus 95 ~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~---ra~~iPVIaD~---DtGy---G~-- 163 (462)
......|+.-+.++|.|++-+-- .+| ||...-.-.+|+..+++|. +..++|+++-+ +.+- .+
T Consensus 109 ~~l~~~sve~a~~~GADAVk~lv------~~g-~d~~~e~~~~q~~~l~rv~~ec~~~GiPlllEil~y~~~~~~~~~~~ 181 (332)
T 3iv3_A 109 DCLVDWSIKRLKEAGADAVKFLL------YYD-VDGDPQVNVQKQAYIERIGSECQAEDIPFFLEILTYDETISNNSSVE 181 (332)
T ss_dssp CBCTTCCHHHHHHTTCSEEEEEE------EEC-TTSCHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECBTTBSCTTSHH
T ss_pred ccccccCHHHHHHcCCCEEEEEE------EcC-CCchHHHHHHHHHHHHHHHHHHHHcCCceEEEEeccCCCCCCCcchh
Confidence 34555667777778888776532 122 3433222235666666664 45689988733 3221 12
Q ss_pred -----HHHHHHHHHHH--HHhCccEEEeCCCCCCC-CCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhh
Q 012478 164 -----AMNVKRTVKGY--IKAGFAGIILEDQVSPK-GCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQ 235 (462)
Q Consensus 164 -----~~nv~rtVk~l--~~AGaaGI~IEDq~~PK-rCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~ 235 (462)
+..|.+.+|.+ .+.|++-+|+|=-..++ .=|+..+..+++.+|.++..+..+++. +.++++++.--
T Consensus 182 ~a~~~p~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~---~~P~v~lsgG~--- 255 (332)
T 3iv3_A 182 FAKVKVHKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEAST---DLPYIYLSAGV--- 255 (332)
T ss_dssp HHTTHHHHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTC---SSCEEEECTTC---
T ss_pred hhccCHHHHHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcC---CCCEEEECCCC---
Confidence 34589999999 78899999998543222 124556678999999988888888775 35777776532
Q ss_pred cccHHHHHHHHHHhHhcCC--cEEEe
Q 012478 236 ALSLEESLRRSRAFADAGA--DVLFI 259 (462)
Q Consensus 236 ~~gldeAI~RakAy~eAGA--D~Ifi 259 (462)
.-++.++-.+-..+||| -.+.+
T Consensus 256 --~~~~fl~~v~~A~~aGa~f~Gv~~ 279 (332)
T 3iv3_A 256 --SAELFQETLVFAHKAGAKFNGVLC 279 (332)
T ss_dssp --CHHHHHHHHHHHHHHTCCCCEEEE
T ss_pred --CHHHHHHHHHHHHHcCCCcceEEe
Confidence 23455666667778999 77765
No 251
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=92.84 E-value=0.4 Score=50.41 Aligned_cols=120 Identities=18% Similarity=0.241 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHH
Q 012478 166 NVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRR 245 (462)
Q Consensus 166 nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~R 245 (462)
+..+.++.+.++|++.|.| |.. |||. ....+.|+.+++.. ++..|++-+- .. .+-
T Consensus 229 ~~~~~a~~l~~aG~d~I~i-d~a----~g~~--------~~~~~~v~~i~~~~----p~~~Vi~g~v----~t----~e~ 283 (490)
T 4avf_A 229 DTGERVAALVAAGVDVVVV-DTA----HGHS--------KGVIERVRWVKQTF----PDVQVIGGNI----AT----AEA 283 (490)
T ss_dssp THHHHHHHHHHTTCSEEEE-ECS----CCSB--------HHHHHHHHHHHHHC----TTSEEEEEEE----CS----HHH
T ss_pred chHHHHHHHhhcccceEEe-ccc----CCcc--------hhHHHHHHHHHHHC----CCceEEEeee----Cc----HHH
Confidence 4466678899999999999 432 5652 22334444444432 3555555311 12 234
Q ss_pred HHHhHhcCCcEEEec---------------CCCCHHHHHHHHHhCC--CCceeeeeeecCCCCCCCCHHHHHhcCCCEEe
Q 012478 246 SRAFADAGADVLFID---------------ALASKEEMKAFCEISP--LVPKMANMLEGGGKTPILNPLELEELGFKLVA 308 (462)
Q Consensus 246 akAy~eAGAD~Ifie---------------~~~s~eei~~i~~~v~--~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~ 308 (462)
++++.+||||+|.+- +.++.+.+.++++.+. .+|+++ .||-.-.-...++-++|...|.
T Consensus 284 a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa----~GGI~~~~di~kal~~GAd~V~ 359 (490)
T 4avf_A 284 AKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIA----DGGIRFSGDLAKAMVAGAYCVM 359 (490)
T ss_dssp HHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEE----ESCCCSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEE----eCCCCCHHHHHHHHHcCCCeee
Confidence 788999999999971 1344555666666432 356543 3343211234556678999998
Q ss_pred ccchHH
Q 012478 309 YPLSLI 314 (462)
Q Consensus 309 yp~~ll 314 (462)
.+..++
T Consensus 360 vGs~~~ 365 (490)
T 4avf_A 360 MGSMFA 365 (490)
T ss_dssp ECTTTT
T ss_pred ecHHHh
Confidence 887654
No 252
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=92.83 E-value=1.5 Score=42.20 Aligned_cols=167 Identities=18% Similarity=0.120 Sum_probs=93.4
Q ss_pred CCh-HHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHH
Q 012478 97 FDA-LSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYI 175 (462)
Q Consensus 97 yDa-lSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~ 175 (462)
+|+ -.|+..+++|+.+|-+ +-.++.-.=+. ...+.|++.+++||+.- ++.-++.++ ....
T Consensus 65 ~~p~~~A~~~~~~GA~~isv---------lt~~~~f~G~~----~~l~~i~~~v~lPvl~k--dfI~d~~qi----~~a~ 125 (254)
T 1vc4_A 65 VDPVEAALAYARGGARAVSV---------LTEPHRFGGSL----LDLKRVREAVDLPLLRK--DFVVDPFML----EEAR 125 (254)
T ss_dssp CCHHHHHHHHHHTTCSEEEE---------ECCCSSSCCCH----HHHHHHHHHCCSCEEEE--SCCCSHHHH----HHHH
T ss_pred CCHHHHHHHHHHcCCCEEEE---------ecchhhhccCH----HHHHHHHHhcCCCEEEC--CcCCCHHHH----HHHH
Confidence 454 4578889999999955 11222111122 24456667889998862 222355443 4566
Q ss_pred HhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCc
Q 012478 176 KAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGAD 255 (462)
Q Consensus 176 ~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD 255 (462)
++||++|+|--. .++ + .++......+.+|-+.++-.. +.+| +....++|+|
T Consensus 126 ~~GAD~VlL~~~-------------~l~-~----~l~~l~~~a~~lGl~~lvev~-------~~~E----~~~a~~~gad 176 (254)
T 1vc4_A 126 AFGASAALLIVA-------------LLG-E----LTGAYLEEARRLGLEALVEVH-------TERE----LEIALEAGAE 176 (254)
T ss_dssp HTTCSEEEEEHH-------------HHG-G----GHHHHHHHHHHHTCEEEEEEC-------SHHH----HHHHHHHTCS
T ss_pred HcCCCEEEECcc-------------chH-H----HHHHHHHHHHHCCCeEEEEEC-------CHHH----HHHHHHcCCC
Confidence 799999999322 222 2 233333333345645543333 3344 3355678999
Q ss_pred EEEecCC------CCHHHHHHHHHhCC----CCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012478 256 VLFIDAL------ASKEEMKAFCEISP----LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316 (462)
Q Consensus 256 ~Ifie~~------~s~eei~~i~~~v~----~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~a 316 (462)
.|-+... .+.+..+++++.+| .+|+. -++ |-.-.-+..+|.+ |+.-|+.+..++++
T Consensus 177 ~IGvn~~~l~~~~~dl~~~~~L~~~i~~~~~~~~vI---Aeg-GI~s~~dv~~l~~-Ga~gvlVGsAl~~~ 242 (254)
T 1vc4_A 177 VLGINNRDLATLHINLETAPRLGRLARKRGFGGVLV---AES-GYSRKEELKALEG-LFDAVLIGTSLMRA 242 (254)
T ss_dssp EEEEESBCTTTCCBCTTHHHHHHHHHHHTTCCSEEE---EES-CCCSHHHHHTTTT-TCSEEEECHHHHTS
T ss_pred EEEEccccCcCCCCCHHHHHHHHHhCccccCCCeEE---EEc-CCCCHHHHHHHHc-CCCEEEEeHHHcCC
Confidence 9877432 34456666666653 23322 243 4221123455666 99999999988864
No 253
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=92.83 E-value=0.3 Score=49.30 Aligned_cols=98 Identities=11% Similarity=-0.039 Sum_probs=58.5
Q ss_pred HHHHHHhC--CCceEecccCChHHHHHHHHhCCcEEEecc-HHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEe
Q 012478 80 SLRQILEL--PGVHQGPACFDALSAKLVEKSGFSFCFTSG-FSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGD 156 (462)
Q Consensus 80 ~LR~ll~~--~~~iv~p~ayDalSArl~e~aGfdaI~vSG-~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD 156 (462)
.++++.+. +-++++-++-+.-.|+.+.++|+|+|.++. .+......-. |....+.-+.+..+...++..++|||+|
T Consensus 151 ~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~-~g~~~p~~~~l~~v~~~~~~~~ipvIa~ 229 (351)
T 2c6q_A 151 FVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKK-TGVGYPQLSAVMECADAAHGLKGHIISD 229 (351)
T ss_dssp HHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTBCHHHH-HCBCCCHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEECCCCCcCcCcccc-CCCCccHHHHHHHHHHHHhhcCCcEEEe
Confidence 44444443 345666788899999999999999998872 1100000000 1111233333334444455568999998
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012478 157 GDNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 157 ~DtGyG~~~nv~rtVk~l~~AGaaGI~I 184 (462)
. |..+..++. +...+||++|.+
T Consensus 230 G--GI~~g~di~----kAlalGA~~V~v 251 (351)
T 2c6q_A 230 G--GCSCPGDVA----KAFGAGADFVML 251 (351)
T ss_dssp S--CCCSHHHHH----HHHHTTCSEEEE
T ss_pred C--CCCCHHHHH----HHHHcCCCceec
Confidence 3 444555555 455689999999
No 254
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=92.81 E-value=0.8 Score=45.82 Aligned_cols=166 Identities=18% Similarity=0.117 Sum_probs=99.7
Q ss_pred HHHHHHhCCCceEecccCChH-HHH-HHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHh------h-cC
Q 012478 80 SLRQILELPGVHQGPACFDAL-SAK-LVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQ------A-VS 150 (462)
Q Consensus 80 ~LR~ll~~~~~iv~p~ayDal-SAr-l~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~r------a-~~ 150 (462)
+||.=++.... .++ .-|-+ -++ .+.++|++.|=+++... -|+ + .+.++.+++ . .+
T Consensus 26 TlRDG~Q~~~~-~~~-~~~k~~i~~~~L~~~Gv~~IE~g~~~~------~~~----~----~~~v~~~~~~~~~~~~~~~ 89 (337)
T 3ble_A 26 TLRDGEQTRGV-SFS-TSEKLNIAKFLLQKLNVDRVEIASARV------SKG----E----LETVQKIMEWAATEQLTER 89 (337)
T ss_dssp HHHHHTTSTTC-CCC-HHHHHHHHHHHHHTTCCSEEEEEETTS------CTT----H----HHHHHHHHHHHHHTTCGGG
T ss_pred CCCCCCCCCCC-CcC-HHHHHHHHHHHHHHcCCCEEEEeCCCC------Chh----H----HHHHHHHHhhhhhhccCCC
Confidence 57776665432 122 22222 356 77789999998876442 122 1 223333333 1 23
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEe
Q 012478 151 IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVAR 230 (462)
Q Consensus 151 iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiAR 230 (462)
..+.+...+. +.++...++|+..|+|=+..++. |...+-=.+.+|.+++++.+++..++.|..+.+..-
T Consensus 90 ~~i~~l~~~~--------~~i~~a~~~g~~~v~i~~~~s~~---~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~ 158 (337)
T 3ble_A 90 IEILGFVDGN--------KTVDWIKDSGAKVLNLLTKGSLH---HLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLE 158 (337)
T ss_dssp EEEEEESSTT--------HHHHHHHHHTCCEEEEEEECSHH---HHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CeEEEEccch--------hhHHHHHHCCCCEEEEEEecCHH---HHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEE
Confidence 5677776642 15677778999999997765432 111111125788888988888877776644333322
Q ss_pred cch--hhcccHHHHHHHHHHhHhcCCcEEEec---CCCCHHHHHHHHH
Q 012478 231 TDS--RQALSLEESLRRSRAFADAGADVLFID---ALASKEEMKAFCE 273 (462)
Q Consensus 231 TDA--~~~~gldeAI~RakAy~eAGAD~Ifie---~~~s~eei~~i~~ 273 (462)
|. ......+..++.++++.++|||.|.+. |.-+++++.++.+
T Consensus 159 -~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~ 205 (337)
T 3ble_A 159 -DWSNGFRNSPDYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVD 205 (337)
T ss_dssp -THHHHHHHCHHHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHH
T ss_pred -ECCCCCcCCHHHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHH
Confidence 20 123457889999999999999999874 3456666665554
No 255
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=92.76 E-value=3.8 Score=42.99 Aligned_cols=151 Identities=17% Similarity=0.187 Sum_probs=87.3
Q ss_pred HHHHHHHhCCcEEEeccHHH--HhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCC--CCCC-HHH-HHHHHHHH
Q 012478 101 SAKLVEKSGFSFCFTSGFSI--SAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDN--GYGN-AMN-VKRTVKGY 174 (462)
Q Consensus 101 SArl~e~aGfdaI~vSG~av--Sas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~Dt--GyG~-~~n-v~rtVk~l 174 (462)
-|+.+.++|++.|=+++.+. ++...-.|| -.|.+..++.....+.+-+.+...+ ||.. +.+ +...++..
T Consensus 35 Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d-----~~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~ddv~~~~v~~a 109 (464)
T 2nx9_A 35 IAQQLDQIGYWSLECWGGATFDSCIRFLGED-----PWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDTFVERA 109 (464)
T ss_dssp GHHHHHTSCCSEEEEEETTHHHHHHHTTCCC-----HHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEeCcCccccchhhccCCC-----HHHHHHHHHHhCCCCeEEEEeccccccCcccccchhhHHHHHHH
Confidence 36778889999999885221 100111232 2344444433211222334455454 6654 344 45678899
Q ss_pred HHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEE-EecchhhcccHHHHHHHHHHhHhcC
Q 012478 175 IKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV-ARTDSRQALSLEESLRRSRAFADAG 253 (462)
Q Consensus 175 ~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIi-ARTDA~~~~gldeAI~RakAy~eAG 253 (462)
.++|++.|+|=+..+. .+ .|+.++++.++.|...... .=+|+. ....+..++-++++.++|
T Consensus 110 ~~~Gvd~i~if~~~sd-------------~~----ni~~~i~~ak~~G~~v~~~i~~~~~~-~~~~e~~~~~a~~l~~~G 171 (464)
T 2nx9_A 110 VKNGMDVFRVFDAMND-------------VR----NMQQALQAVKKMGAHAQGTLCYTTSP-VHNLQTWVDVAQQLAELG 171 (464)
T ss_dssp HHTTCCEEEECCTTCC-------------TH----HHHHHHHHHHHTTCEEEEEEECCCCT-TCCHHHHHHHHHHHHHTT
T ss_pred HhCCcCEEEEEEecCH-------------HH----HHHHHHHHHHHCCCEEEEEEEeeeCC-CCCHHHHHHHHHHHHHCC
Confidence 9999999999876421 12 3334444444434332212 224442 346889999999999999
Q ss_pred CcEEEec---CCCCHHHHHHHHHh
Q 012478 254 ADVLFID---ALASKEEMKAFCEI 274 (462)
Q Consensus 254 AD~Ifie---~~~s~eei~~i~~~ 274 (462)
||.|.+. |+-.+.++.++++.
T Consensus 172 ad~I~l~DT~G~~~P~~v~~lv~~ 195 (464)
T 2nx9_A 172 VDSIALKDMAGILTPYAAEELVST 195 (464)
T ss_dssp CSEEEEEETTSCCCHHHHHHHHHH
T ss_pred CCEEEEcCCCCCcCHHHHHHHHHH
Confidence 9999884 45566776666543
No 256
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=92.76 E-value=5.7 Score=38.76 Aligned_cols=136 Identities=13% Similarity=0.026 Sum_probs=88.9
Q ss_pred ChHHHHHHHHhCCcEEEec-cH-HH-HhhhccCCCCCCCCHHHHHHHHHHHHhh---cCCcEE------EeCCC-CCCCH
Q 012478 98 DALSAKLVEKSGFSFCFTS-GF-SI-SAARLALPDTGFISYGEMVDQGQLITQA---VSIPVI------GDGDN-GYGNA 164 (462)
Q Consensus 98 DalSArl~e~aGfdaI~vS-G~-av-Sas~lG~PD~g~vsl~Eml~~~~~I~ra---~~iPVI------aD~Dt-GyG~~ 164 (462)
+.-..+.+-++|++.|.+. +. -. .-..++ .|++|.++.++.+++. .++.|- .+.++ |+-++
T Consensus 85 ~~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~------~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~ 158 (302)
T 2ftp_A 85 NLKGFEAALESGVKEVAVFAAASEAFSQRNIN------CSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDP 158 (302)
T ss_dssp SHHHHHHHHHTTCCEEEEEEESCHHHHHHHHS------SCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCH
T ss_pred CHHHHHHHHhCCcCEEEEEEecCHHHHHHHhC------CCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCH
Confidence 5555566667899988764 21 11 001123 4799999888877653 456664 34343 44578
Q ss_pred HHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHH
Q 012478 165 MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLR 244 (462)
Q Consensus 165 ~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~ 244 (462)
..+.+.++.+.++|+..|.|-|.. |. ..+++..+.|+++++.-. +..+.+-+..|.- -++.
T Consensus 159 ~~~~~~~~~~~~~G~d~i~l~DT~-----G~------~~P~~~~~lv~~l~~~~~--~~~l~~H~Hn~~G------la~A 219 (302)
T 2ftp_A 159 RQVAWVARELQQMGCYEVSLGDTI-----GV------GTAGATRRLIEAVASEVP--RERLAGHFHDTYG------QALA 219 (302)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEESS-----SC------CCHHHHHHHHHHHTTTSC--GGGEEEEEBCTTS------CHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCC-----CC------cCHHHHHHHHHHHHHhCC--CCeEEEEeCCCcc------HHHH
Confidence 899999999999999999999875 32 345677777777765431 1245555555542 2355
Q ss_pred HHHHhHhcCCcEEE
Q 012478 245 RSRAFADAGADVLF 258 (462)
Q Consensus 245 RakAy~eAGAD~If 258 (462)
-..+..++||+.|=
T Consensus 220 n~laAv~aGa~~vd 233 (302)
T 2ftp_A 220 NIYASLLEGIAVFD 233 (302)
T ss_dssp HHHHHHHTTCCEEE
T ss_pred HHHHHHHhCCCEEE
Confidence 67777889998763
No 257
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=92.76 E-value=0.35 Score=47.34 Aligned_cols=153 Identities=16% Similarity=0.147 Sum_probs=90.3
Q ss_pred HHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccE
Q 012478 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAG 181 (462)
Q Consensus 102 Arl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaG 181 (462)
++.+.++|++.|=++++... .-.|=.. ..+++ .+.+.+..++++.+..+ + .+.++...++|+..
T Consensus 33 ~~~L~~~Gv~~IE~g~~~~~---~~~p~~~--d~~~~---~~~~~~~~~~~~~~l~~----~----~~~i~~a~~ag~~~ 96 (298)
T 2cw6_A 33 IDMLSEAGLSVIETTSFVSP---KWVPQMG--DHTEV---LKGIQKFPGINYPVLTP----N----LKGFEAAVAAGAKE 96 (298)
T ss_dssp HHHHHHTTCSEECCEECCCT---TTCGGGT--THHHH---HHHSCCCTTCBCCEECC----S----HHHHHHHHHTTCSE
T ss_pred HHHHHHcCcCEEEECCCcCc---ccccccC--CHHHH---HHHHhhCCCCEEEEEcC----C----HHhHHHHHHCCCCE
Confidence 45667899999988863211 1122111 22333 33343333455555542 2 34567778899999
Q ss_pred EEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchh-----hcccHHHHHHHHHHhHhcCCcE
Q 012478 182 IILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSR-----QALSLEESLRRSRAFADAGADV 256 (462)
Q Consensus 182 I~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~-----~~~gldeAI~RakAy~eAGAD~ 256 (462)
|+|=+..++. |...+--.+.+|..++++.+++..++.|..+.+.-- .+. .....+..++.++++.++|||.
T Consensus 97 v~i~~~~sd~---~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~ 172 (298)
T 2cw6_A 97 VVIFGAASEL---FTKKNINCSIEESFQRFDAILKAAQSANISVRGYVS-CALGCPYEGKISPAKVAEVTKKFYSMGCYE 172 (298)
T ss_dssp EEEEEESCHH---HHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEE-TTTCBTTTBSCCHHHHHHHHHHHHHTTCSE
T ss_pred EEEEecCCHH---HHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEE-EEeeCCcCCCCCHHHHHHHHHHHHHcCCCE
Confidence 9997765321 211111135788888988888777765533322111 111 1235788999999999999999
Q ss_pred EEec---CCCCHHHHHHHHHh
Q 012478 257 LFID---ALASKEEMKAFCEI 274 (462)
Q Consensus 257 Ifie---~~~s~eei~~i~~~ 274 (462)
|.+. +.-+++++.++.+.
T Consensus 173 i~l~DT~G~~~P~~~~~lv~~ 193 (298)
T 2cw6_A 173 ISLGDTIGVGTPGIMKDMLSA 193 (298)
T ss_dssp EEEEETTSCCCHHHHHHHHHH
T ss_pred EEecCCCCCcCHHHHHHHHHH
Confidence 9874 44566666665543
No 258
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=92.75 E-value=4 Score=41.38 Aligned_cols=126 Identities=24% Similarity=0.337 Sum_probs=87.1
Q ss_pred CCHHHHHHHHHHHHHh---CccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhccc
Q 012478 162 GNAMNVKRTVKGYIKA---GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS 238 (462)
Q Consensus 162 G~~~nv~rtVk~l~~A---GaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~g 238 (462)
++++.+.+.++++.+. |...+||- .|. -+.++-+++|++++++. |+++.|. .|+.....
T Consensus 170 ~~~e~~~~~a~~~~~~~~~G~~~iKlK-------vG~------~~~~~d~~~v~avR~a~---G~~~~l~--vDaN~~~~ 231 (390)
T 3ugv_A 170 SPAEVAAEAVELKAEGQGTGFKGLKLR-------MGR------DDPAVDIETAEAVWDAV---GRDTALM--VDFNQGLD 231 (390)
T ss_dssp CHHHHHHHHHHHHHTTCTTCCSEEEEE-------CCC------SSHHHHHHHHHHHHHHH---CTTSEEE--EECTTCCC
T ss_pred CCHHHHHHHHHHHHHhhhCCCcEEEEe-------cCC------CCHHHHHHHHHHHHHHh---CCCCEEE--EECCCCCC
Confidence 4567888888999989 99999993 222 13566788998888774 5677664 47777778
Q ss_pred HHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHH---HhcC-CCEEeccc
Q 012478 239 LEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLEL---EELG-FKLVAYPL 311 (462)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL---~~lG-v~~V~yp~ 311 (462)
.++|++.++++.+.|.+ |+|-+ .+.+.++++.+.++ +|+.++ .. ..+..++ -+.| ++.+..-.
T Consensus 232 ~~~A~~~~~~l~~~~i~--~iEqP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~a~d~v~ik~ 301 (390)
T 3ugv_A 232 MAEAMHRTRQIDDLGLE--WIEEPVVYDNFDGYAQLRHDLK-TPLMIG-----EN--FYGPREMHQALQAGACDLVMPDF 301 (390)
T ss_dssp HHHHHHHHHHHTTSCCS--EEECCSCTTCHHHHHHHHHHCS-SCEEEC-----TT--CCSHHHHHHHHHTTCCSEECCBH
T ss_pred HHHHHHHHHHHHhhCCC--EEECCCCcccHHHHHHHHHhcC-CCEEeC-----CC--cCCHHHHHHHHHcCCCCEEEeCc
Confidence 99999999999998765 55543 26788899988876 676543 11 2355554 4446 66666544
Q ss_pred hHHH
Q 012478 312 SLIG 315 (462)
Q Consensus 312 ~ll~ 315 (462)
.-..
T Consensus 302 ~~~G 305 (390)
T 3ugv_A 302 MRIG 305 (390)
T ss_dssp HHHT
T ss_pred cccC
Confidence 4433
No 259
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=92.70 E-value=0.25 Score=52.04 Aligned_cols=120 Identities=18% Similarity=0.250 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHH
Q 012478 166 NVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRR 245 (462)
Q Consensus 166 nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~R 245 (462)
+..+.++.++++|++.|.|. .. |||. +...+.|+.++++- ++..|++-+- .. .+-
T Consensus 231 d~~~~a~~l~~aG~d~I~id-~a----~g~~--------~~~~~~i~~ir~~~----p~~~Vi~g~v----~t----~e~ 285 (496)
T 4fxs_A 231 GNEERVKALVEAGVDVLLID-SS----HGHS--------EGVLQRIRETRAAY----PHLEIIGGNV----AT----AEG 285 (496)
T ss_dssp CCHHHHHHHHHTTCSEEEEE-CS----CTTS--------HHHHHHHHHHHHHC----TTCCEEEEEE----CS----HHH
T ss_pred chHHHHHHHHhccCceEEec-cc----cccc--------hHHHHHHHHHHHHC----CCceEEEccc----Cc----HHH
Confidence 34666788899999999994 32 5553 23344555554442 3444444211 11 234
Q ss_pred HHHhHhcCCcEEEec---------------CCCCHHHHHHHHHhCC--CCceeeeeeecCCCCCCCCHHHHHhcCCCEEe
Q 012478 246 SRAFADAGADVLFID---------------ALASKEEMKAFCEISP--LVPKMANMLEGGGKTPILNPLELEELGFKLVA 308 (462)
Q Consensus 246 akAy~eAGAD~Ifie---------------~~~s~eei~~i~~~v~--~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~ 308 (462)
++++.+||||+|.+. +.+..+.+.++++... .+|+++ .||-.-.-....+-++|...|.
T Consensus 286 a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa----~GGI~~~~di~kala~GAd~V~ 361 (496)
T 4fxs_A 286 ARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIA----DGGIRFSGDISKAIAAGASCVM 361 (496)
T ss_dssp HHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEE----ESCCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEE----eCCCCCHHHHHHHHHcCCCeEE
Confidence 788889999999973 1234444555554321 256543 2342211234456678999998
Q ss_pred ccchHH
Q 012478 309 YPLSLI 314 (462)
Q Consensus 309 yp~~ll 314 (462)
.+..+.
T Consensus 362 iGs~f~ 367 (496)
T 4fxs_A 362 VGSMFA 367 (496)
T ss_dssp ESTTTT
T ss_pred ecHHHh
Confidence 887544
No 260
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=92.69 E-value=1.8 Score=40.97 Aligned_cols=140 Identities=10% Similarity=0.012 Sum_probs=84.9
Q ss_pred cCC-cEEEeCCCCCCCHHH-HHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeE
Q 012478 149 VSI-PVIGDGDNGYGNAMN-VKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIV 226 (462)
Q Consensus 149 ~~i-PVIaD~DtGyG~~~n-v~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~v 226 (462)
.+. +|++|+=.+ +..| +...++.+.+. +.+.+--. .|+ .. -|++++++.++.+...+
T Consensus 51 ~~~~~VflDlK~~--DI~nTv~~~~~~~~~~--d~vTVh~~-----~G~---~~---------~~~~a~~~~~~~~~~v~ 109 (222)
T 4dbe_A 51 LDVEEIIVDFKLA--DIGYIMKSIVERLSFA--NSFIAHSF-----IGV---KG---------SLDELKRYLDANSKNLY 109 (222)
T ss_dssp CCCSEEEEEEEEC--SCHHHHHHHHTTCTTC--SEEEEEST-----TCT---TT---------THHHHHHHHHHTTCEEE
T ss_pred cCCCeEEEEeeec--chHHHHHHHHHHHHhC--CEEEEEcC-----cCc---HH---------HHHHHHHHHHhcCCcEE
Confidence 478 999999874 5322 33334333333 56555221 111 11 24445555444345677
Q ss_pred EEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCC-CCCHHHHHhcCCC
Q 012478 227 IVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTP-ILNPLELEELGFK 305 (462)
Q Consensus 227 IiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP-~ls~~eL~~lGv~ 305 (462)
+...++......+ ...++++...++|+|.++..+ ..+++++.+.+..+. ++-+++ |-.| .-++++.-+.|.+
T Consensus 110 vLts~s~~~~~~~-~~~~~a~~a~~~g~~GvV~sa-t~p~e~~~ir~~~~~---~~~vtP--GI~~~g~tp~~a~~~Gad 182 (222)
T 4dbe_A 110 LVAVMSHEGWSTL-FADYIKNVIREISPKGIVVGG-TKLDHITQYRRDFEK---MTIVSP--GMGSQGGSYGDAVCAGAD 182 (222)
T ss_dssp EEEECSSTTCCCT-THHHHHHHHHHHCCSEEEECT-TCHHHHHHHHHHCTT---CEEEEC--CBSTTSBCTTHHHHHTCS
T ss_pred EEEeCCCcchHHH-HHHHHHHHHHHhCCCEEEECC-CCHHHHHHHHHhCCC---CEEEcC--CcccCccCHHHHHHcCCC
Confidence 8889887543221 236788888899999998755 445788888777653 333333 3222 2267788899999
Q ss_pred EEeccchHHHH
Q 012478 306 LVAYPLSLIGV 316 (462)
Q Consensus 306 ~V~yp~~ll~a 316 (462)
.++.|-....+
T Consensus 183 ~iVVGR~I~~A 193 (222)
T 4dbe_A 183 YEIIGRSIYNA 193 (222)
T ss_dssp EEEECHHHHTS
T ss_pred EEEECHHhcCC
Confidence 99998877754
No 261
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=92.65 E-value=9 Score=38.28 Aligned_cols=212 Identities=16% Similarity=0.153 Sum_probs=130.8
Q ss_pred HHHHHHHhCCCceEecccCChHHHHH----HHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhh-cCCcE
Q 012478 79 KSLRQILELPGVHQGPACFDALSAKL----VEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQA-VSIPV 153 (462)
Q Consensus 79 ~~LR~ll~~~~~iv~p~ayDalSArl----~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra-~~iPV 153 (462)
+-|....+.+--+-+.|+++.-+++. +|+.+-+.|+-.+-+.. ...|. +-+...++..++. .++||
T Consensus 7 ~ll~~A~~~~yAV~AfNv~n~e~~~avi~AAee~~sPvIlq~s~g~~-~y~g~--------~~~~~~v~~aa~~~~~VPV 77 (307)
T 3n9r_A 7 EILLKAHKEGYGVGAFNFVNFEMLNAIFEAGNEENSPLFIQASEGAI-KYMGI--------DMAVGMVKIMCERYPHIPV 77 (307)
T ss_dssp HHHHHHHHHTCCEEEEECSSHHHHHHHHHHHHHHTCCEEEEEEHHHH-HHHCH--------HHHHHHHHHHHHHSTTSCE
T ss_pred HHHHHHHHcCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhhh-hhCCH--------HHHHHHHHHHHHhcCCCcE
Confidence 34555555555688889999888764 46678998886653321 22232 2233444444454 68999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEE---e
Q 012478 154 IGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA---R 230 (462)
Q Consensus 154 IaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiA---R 230 (462)
..=.|+|. + ...+++.+++|...|.| |.. | .|.||=+++-+..++.....| .-|=| +
T Consensus 78 alHLDHg~-~----~e~~~~ai~~GFtSVMi-DgS------~------~p~eeNi~~Tk~vv~~ah~~g--vsVEaELG~ 137 (307)
T 3n9r_A 78 ALHLDHGT-T----FESCEKAVKAGFTSVMI-DAS------H------HAFEENLELTSKVVKMAHNAG--VSVEAELGR 137 (307)
T ss_dssp EEEEEEEC-S----HHHHHHHHHHTCSEEEE-CCT------T------SCHHHHHHHHHHHHHHHHHTT--CEEEEEESC
T ss_pred EEECCCCC-C----HHHHHHHHHhCCCcEEE-ECC------C------CCHHHHHHHHHHHHHHHHHcC--CeEEEEeee
Confidence 99999984 3 35556777899999999 542 3 367877777777776665432 22211 1
Q ss_pred c----chh-------hcccHHHHHHHHHHhH-hcCCcEEEe-----cCC--------CCHHHHHHHHHhCCCCceeeeee
Q 012478 231 T----DSR-------QALSLEESLRRSRAFA-DAGADVLFI-----DAL--------ASKEEMKAFCEISPLVPKMANML 285 (462)
Q Consensus 231 T----DA~-------~~~gldeAI~RakAy~-eAGAD~Ifi-----e~~--------~s~eei~~i~~~v~~vP~~~N~l 285 (462)
+ |.. .-.+.+| |+.|. +.|+|++-+ ++. -+.+.++++.+. +.+|+ ++
T Consensus 138 igG~Ed~~~~~~~~~~yT~Pee----a~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~-~~~PL---Vl 209 (307)
T 3n9r_A 138 LMGIEDNISVDEKDAVLVNPKE----AEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRL-TNIPL---VL 209 (307)
T ss_dssp CCCC----------CCSCCHHH----HHHHHHHHCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHH-HCSCE---EE
T ss_pred eccccCCcccccccccCCCHHH----HHHHHHHHCCCEEEEecCCcccccCCCCCCccCHHHHHHHHhc-CCCCe---EE
Confidence 1 000 0023344 44444 589998864 222 256778888543 33664 34
Q ss_pred ecCCCCC------------------CCCHHHHH---hcCCCEEeccchHHHHHHHHHHHHHHH
Q 012478 286 EGGGKTP------------------ILNPLELE---ELGFKLVAYPLSLIGVSVRAMQDALTA 327 (462)
Q Consensus 286 ~~~g~tP------------------~ls~~eL~---~lGv~~V~yp~~ll~aa~~Am~~~l~~ 327 (462)
.|+...| .++.++++ ++|+.-|-+..-+..+...++++.+..
T Consensus 210 HGgS~vp~~~~~~~~~~gg~~~~~~G~p~e~i~~ai~~GV~KiNi~Tdl~~a~~~~vr~~~~~ 272 (307)
T 3n9r_A 210 HGASAIPDNVRKSYLDAGGDLKGSKGVPFEFLQESVKGGINKVNTDTDLRIAFIAEVRKVANE 272 (307)
T ss_dssp SSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHH
T ss_pred eCCCCcchHHHHHHHHhcCccCCCCCCCHHHHHHHHHcCceEEEechHHHHHHHHHHHHHHHh
Confidence 5432111 45666655 569999999999999999999888653
No 262
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=92.61 E-value=2.6 Score=41.31 Aligned_cols=140 Identities=16% Similarity=0.075 Sum_probs=84.5
Q ss_pred cEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCC-CCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEe
Q 012478 152 PVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHT-RGRKVVSREEAVMRIKAAVDARKESGSDIVIVAR 230 (462)
Q Consensus 152 PVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~-~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiAR 230 (462)
-.+++.|.|......-..-++..++.||+-|-+==.. |.. .| ..+.+.+-|++.+++.. +..+.+|--
T Consensus 98 ~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNi-----g~lk~g----~~~~v~~eI~~v~~a~~--~~~lKVIlE 166 (260)
T 3r12_A 98 VTVVGFPLGANETRTKAHEAIFAVESGADEIDMVINV-----GMLKAK----EWEYVYEDIRSVVESVK--GKVVKVIIE 166 (260)
T ss_dssp EEEESTTTCCSCHHHHHHHHHHHHHHTCSEEEEECCH-----HHHHTT----CHHHHHHHHHHHHHHTT--TSEEEEECC
T ss_pred EEEecCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeeh-----hhhccc----cHHHHHHHHHHHHHhcC--CCcEEEEEe
Confidence 3456888887666444445678888999998552111 110 01 23567788888888864 334666655
Q ss_pred cchhhcccHHHHHHHHHHhHhcCCcEEE-----ecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCC
Q 012478 231 TDSRQALSLEESLRRSRAFADAGADVLF-----IDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFK 305 (462)
Q Consensus 231 TDA~~~~gldeAI~RakAy~eAGAD~If-----ie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~ 305 (462)
|..+ .-++.+.-|+...+||||.|= ..+-.+.+.++-+.+.+.. ++. +-..||--..-...++-++|..
T Consensus 167 t~~L---t~eei~~A~~ia~eaGADfVKTSTGf~~~GAT~edV~lm~~~vg~-~v~--VKaAGGIrt~~~al~mi~aGA~ 240 (260)
T 3r12_A 167 TCYL---DTEEKIAACVISKLAGAHFVKTSTGFGTGGATAEDVHLMKWIVGD-EMG--VKASGGIRTFEDAVKMIMYGAD 240 (260)
T ss_dssp GGGC---CHHHHHHHHHHHHHTTCSEEECCCSSSSCCCCHHHHHHHHHHHCT-TSE--EEEESSCCSHHHHHHHHHTTCS
T ss_pred CCCC---CHHHHHHHHHHHHHhCcCEEEcCCCCCCCCCCHHHHHHHHHHhCC-Cce--EEEeCCCCCHHHHHHHHHcCCc
Confidence 5433 335666667888899999994 3334567777777776542 222 2222332212345667888999
Q ss_pred EEe
Q 012478 306 LVA 308 (462)
Q Consensus 306 ~V~ 308 (462)
|+-
T Consensus 241 RiG 243 (260)
T 3r12_A 241 RIG 243 (260)
T ss_dssp EEE
T ss_pred eee
Confidence 863
No 263
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=92.61 E-value=1.7 Score=44.04 Aligned_cols=139 Identities=20% Similarity=0.225 Sum_probs=90.1
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEE
Q 012478 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA 229 (462)
Q Consensus 150 ~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiA 229 (462)
.+|+-+-. |.+++..+.+.++++.+.|...+||-= |.... -.+.++-+++|+|++++ .|+++.|.
T Consensus 134 ~v~~y~s~--~~~~~e~~~~~a~~~~~~G~~~~K~Kv-------g~~~~--~~~~~~d~~~v~avR~a---~G~~~~L~- 198 (386)
T 3fv9_G 134 PVPVISSI--GGDTPEAMRAKVARHRAQGFKGHSIKI-------GASEA--EGGPALDAERITACLAD---RQPGEWYL- 198 (386)
T ss_dssp CBCEEEEE--CSCCHHHHHHHHHHHHHTTCCEEEEEC-------CCCTT--TTHHHHHHHHHHHHTTT---CCTTCEEE-
T ss_pred ceeeeEec--CCCCHHHHHHHHHHHHHCCCCEEEEec-------cCCCC--CCCHHHHHHHHHHHHHH---cCCCCeEE-
Confidence 36665432 456788888889999999999999932 22111 01346667888887665 35676553
Q ss_pred ecchhhcccHHHHHHHHHHhHhcCCcEEEecCC-CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHH---HHhcC-C
Q 012478 230 RTDSRQALSLEESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELG-F 304 (462)
Q Consensus 230 RTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~e---L~~lG-v 304 (462)
.|+......++|++-++++. .+.+. |+|-+ ++.+.++++.+..+ +|+.++ .. ..+..+ +-+.| +
T Consensus 199 -vDaN~~~~~~~A~~~~~~l~-~~~~i-~iEeP~~~~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~~~~~a~ 267 (386)
T 3fv9_G 199 -ADANNGLTVEHALRMLSLLP-PGLDI-VLEAPCASWAETKSLRARCA-LPLLLD-----EL--IQTETDLIAAIRDDLC 267 (386)
T ss_dssp -EECTTCCCHHHHHHHHHHSC-SSCCC-EEECCCSSHHHHHHHHTTCC-SCEEES-----TT--CCSHHHHHHHHHTTCC
T ss_pred -EECCCCCCHHHHHHHHHHhh-ccCCc-EEecCCCCHHHHHHHHhhCC-CCEEeC-----CC--cCCHHHHHHHHHhCCC
Confidence 47777778999999999883 23455 88764 57788899988775 676543 11 234444 44445 6
Q ss_pred CEEeccchHH
Q 012478 305 KLVAYPLSLI 314 (462)
Q Consensus 305 ~~V~yp~~ll 314 (462)
+.+..-..-.
T Consensus 268 d~v~~k~~~~ 277 (386)
T 3fv9_G 268 DGVGLKVSKQ 277 (386)
T ss_dssp SEEEEEHHHH
T ss_pred CEEEECcccc
Confidence 6666544433
No 264
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=92.57 E-value=2.2 Score=43.54 Aligned_cols=138 Identities=18% Similarity=0.110 Sum_probs=87.1
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCC----CCCCCCC--CCC---CCCcccC---HHHHHHHHHHHHHHHHhhCCCeEEE
Q 012478 161 YGNAMNVKRTVKGYIKAGFAGIILED----QVSPKGC--GHT---RGRKVVS---REEAVMRIKAAVDARKESGSDIVIV 228 (462)
Q Consensus 161 yG~~~nv~rtVk~l~~AGaaGI~IED----q~~PKrC--GH~---~gk~Lvp---~ee~~~kI~AA~~Ar~~~g~d~vIi 228 (462)
+.+++.+.+.++++.+.|..++||-= ...+... |.. ....-++ .++.+++|+|++++. |+++.|.
T Consensus 141 ~~~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~av---G~d~~l~ 217 (409)
T 3go2_A 141 VTDLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGA---GPDVEIL 217 (409)
T ss_dssp CCSHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHH---CTTSEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHh---CCCCEEE
Confidence 34678888899999999999999831 0000000 110 0000112 345677888887764 6777665
Q ss_pred EecchhhcccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHH---HHHhcC-C
Q 012478 229 ARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPL---ELEELG-F 304 (462)
Q Consensus 229 ARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~---eL~~lG-v 304 (462)
. |+.....+++|++-++++.+.|.+.|=.+ +.+.+.++++.+.++ +|+.++ +. ..+.. ++-+.| +
T Consensus 218 v--DaN~~~~~~~A~~~~~~L~~~~i~~iE~P-~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~~~ 286 (409)
T 3go2_A 218 L--DLNFNAKPEGYLKILRELADFDLFWVEID-SYSPQGLAYVRNHSP-HPISSC-----ET--LFGIREFKPFFDANAV 286 (409)
T ss_dssp E--ECTTCSCHHHHHHHHHHTTTSCCSEEECC-CSCHHHHHHHHHTCS-SCEEEC-----TT--CCHHHHHHHHHHTTCC
T ss_pred E--ECCCCCCHHHHHHHHHHHhhcCCeEEEeC-cCCHHHHHHHHhhCC-CCEEeC-----CC--cCCHHHHHHHHHhCCC
Confidence 4 67677789999999999999987765433 357888999998875 676532 21 22444 444446 6
Q ss_pred CEEeccch
Q 012478 305 KLVAYPLS 312 (462)
Q Consensus 305 ~~V~yp~~ 312 (462)
+.|..=..
T Consensus 287 d~v~~k~~ 294 (409)
T 3go2_A 287 DVAIVDTI 294 (409)
T ss_dssp SEEEECHH
T ss_pred CEEEeCCC
Confidence 66655443
No 265
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=92.56 E-value=1.3 Score=44.70 Aligned_cols=126 Identities=16% Similarity=0.201 Sum_probs=85.3
Q ss_pred CCCCHHHHHHHHHHHHHh-CccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhccc
Q 012478 160 GYGNAMNVKRTVKGYIKA-GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS 238 (462)
Q Consensus 160 GyG~~~nv~rtVk~l~~A-GaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~g 238 (462)
|.+++....+.++.+.+. |...+||- .|. .+.++-+++|+|++++. |+++.|.. |+.....
T Consensus 145 ~~~~~~~~~~~a~~~~~~~G~~~~K~K-------vg~------~~~~~d~~~v~avR~a~---g~~~~l~v--Dan~~~~ 206 (383)
T 3i4k_A 145 GVLPLDVAVAEIEERIEEFGNRSFKLK-------MGA------GDPAEDTRRVAELAREV---GDRVSLRI--DINARWD 206 (383)
T ss_dssp CSCCHHHHHHHHHHHHHHHCCSEEEEE-------CCS------SCHHHHHHHHHHHHHTT---TTTSEEEE--ECTTCSC
T ss_pred eCCCHHHHHHHHHHHHHhcCCcEEEEe-------eCC------CCHHHHHHHHHHHHHHc---CCCCEEEE--ECCCCCC
Confidence 456777777777887776 99999993 232 13567788998887774 45665543 6667778
Q ss_pred HHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHH---HHhcC-CCEEeccc
Q 012478 239 LEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELG-FKLVAYPL 311 (462)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~e---L~~lG-v~~V~yp~ 311 (462)
.++|++-++++.+.|.+ |+|-+ .+.+.++++.+..+ +|+.++ +. ..+..+ +-+.| ++.|..-.
T Consensus 207 ~~~A~~~~~~l~~~~i~--~iEqP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~~~d~v~~k~ 276 (383)
T 3i4k_A 207 RRTALHYLPILAEAGVE--LFEQPTPADDLETLREITRRTN-VSVMAD-----ES--VWTPAEALAVVKAQAADVIALKT 276 (383)
T ss_dssp HHHHHHHHHHHHHTTCC--EEESCSCTTCHHHHHHHHHHHC-CEEEES-----TT--CSSHHHHHHHHHHTCCSEEEECT
T ss_pred HHHHHHHHHHHHhcCCC--EEECCCChhhHHHHHHHHhhCC-CCEEec-----Cc--cCCHHHHHHHHHcCCCCEEEEcc
Confidence 99999999999999866 55543 34678888888765 566533 21 234544 44445 67766644
Q ss_pred hH
Q 012478 312 SL 313 (462)
Q Consensus 312 ~l 313 (462)
.-
T Consensus 277 ~~ 278 (383)
T 3i4k_A 277 TK 278 (383)
T ss_dssp TT
T ss_pred cc
Confidence 43
No 266
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=92.55 E-value=3.2 Score=42.90 Aligned_cols=145 Identities=12% Similarity=0.131 Sum_probs=89.1
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCC----------CCC-----CCC---------CCCcccC---
Q 012478 151 IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSP----------KGC-----GHT---------RGRKVVS--- 203 (462)
Q Consensus 151 iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~P----------KrC-----GH~---------~gk~Lvp--- 203 (462)
+|+-+-. +..+++.+.+.++.+.+.|..++||-=+..+ +.| |.. .+. ..+
T Consensus 145 v~~y~~~--~~~~~e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 221 (440)
T 3t6c_A 145 IALYVHT--DGADEVEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPGI-YFDPEA 221 (440)
T ss_dssp EEEEEEE--CCSSHHHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSSE-ECCHHH
T ss_pred eEEEEEC--CCCCHHHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccccccccccccccccccccc-cccchh
Confidence 5654422 3346788888899999999999998432211 000 000 010 011
Q ss_pred -HHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCC---CHHHHHHHHHhCCCCc
Q 012478 204 -REEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALA---SKEEMKAFCEISPLVP 279 (462)
Q Consensus 204 -~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~---s~eei~~i~~~v~~vP 279 (462)
.++-+++|+|++++. |+++.|. .|+......++|++-++++.+.|.+ |+|-+- +.+.++++.+.++ +|
T Consensus 222 ~~~~d~~~v~avR~a~---G~d~~L~--vDaN~~~~~~~A~~~~~~L~~~~i~--~iEeP~~~~d~~~~~~l~~~~~-iP 293 (440)
T 3t6c_A 222 YAKSIPRLFDHLRNKL---GFSVELL--HDAHERITPINAIHMAKALEPYQLF--FLEDPVAPENTEWLKMLRQQSS-TP 293 (440)
T ss_dssp HHHHHHHHHHHHHHHH---CSSSEEE--EECTTCSCHHHHHHHHHHTGGGCCS--EEECSSCGGGGGGHHHHHHHCC-SC
T ss_pred hHHHHHHHHHHHHHhc---CCCCeEE--EECCCCCCHHHHHHHHHHhhhcCCC--EEECCCChhhHHHHHHHHhhcC-CC
Confidence 355677888877764 6677664 4666677899999999999998866 455432 4567888888775 67
Q ss_pred eeeeeeecCCCCCCCCHHH---HHhcC-CCEEeccchH
Q 012478 280 KMANMLEGGGKTPILNPLE---LEELG-FKLVAYPLSL 313 (462)
Q Consensus 280 ~~~N~l~~~g~tP~ls~~e---L~~lG-v~~V~yp~~l 313 (462)
+.++ .. ..+..+ +-+.| +..|..-..-
T Consensus 294 Ia~d-----E~--~~~~~~~~~~i~~~a~d~v~~k~~~ 324 (440)
T 3t6c_A 294 IAMG-----EL--FVNVNEWKPLIDNKLIDYIRCHISS 324 (440)
T ss_dssp EEEC-----TT--CCSHHHHHHHHHTTCCSEECCCGGG
T ss_pred EEeC-----cc--cCCHHHHHHHHHcCCccceeechhh
Confidence 6543 11 234444 44445 6666654443
No 267
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=92.53 E-value=0.68 Score=47.09 Aligned_cols=99 Identities=12% Similarity=0.133 Sum_probs=59.5
Q ss_pred cCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCC--CC--------CCCCCCCCcccCHHHHHHHHHHHHHHH
Q 012478 149 VSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVS--PK--------GCGHTRGRKVVSREEAVMRIKAAVDAR 218 (462)
Q Consensus 149 ~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~--PK--------rCGH~~gk~Lvp~ee~~~kI~AA~~Ar 218 (462)
+++||++=+--++ +..++.+.++.++++||+||.+-.... +. ..|-..|+++.|.. .+.|+.++++.
T Consensus 219 ~~~Pv~vKi~p~~-~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a--~~~v~~i~~~v 295 (367)
T 3zwt_A 219 HRPAVLVKIAPDL-TSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLS--TQTIREMYALT 295 (367)
T ss_dssp GCCEEEEEECSCC-CHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHH--HHHHHHHHHHT
T ss_pred CCceEEEEeCCCC-CHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhH--HHHHHHHHHHc
Confidence 6799999887654 345778888999999999999876541 10 11222345444432 33444444332
Q ss_pred HhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEec
Q 012478 219 KESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFID 260 (462)
Q Consensus 219 ~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie 260 (462)
+.++-|++=-+-.. .+ .+..+.++|||+|.+-
T Consensus 296 ---~~~ipvI~~GGI~s---~~----da~~~l~~GAd~V~vg 327 (367)
T 3zwt_A 296 ---QGRVPIIGVGGVSS---GQ----DALEKIRAGASLVQLY 327 (367)
T ss_dssp ---TTCSCEEEESSCCS---HH----HHHHHHHHTCSEEEES
T ss_pred ---CCCceEEEECCCCC---HH----HHHHHHHcCCCEEEEC
Confidence 23555555443321 23 4555667899999973
No 268
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=92.52 E-value=1.3 Score=44.34 Aligned_cols=110 Identities=15% Similarity=0.204 Sum_probs=67.2
Q ss_pred HHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHH
Q 012478 168 KRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSR 247 (462)
Q Consensus 168 ~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~Rak 247 (462)
.+.++.+.++|++.|++--.. |..+.+++++. .++.|+.... ..+ .++
T Consensus 112 ~~~~~~~~~~g~~~V~~~~g~--------------~~~~~i~~~~~---------~g~~v~~~v~-----t~~----~a~ 159 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSFHFGV--------------PDREVIARLRR---------AGTLTLVTAT-----TPE----EAR 159 (369)
T ss_dssp HHHHHHHHHSCCSEEEEESSC--------------CCHHHHHHHHH---------TTCEEEEEES-----SHH----HHH
T ss_pred HHHHHHHHhcCCCEEEEeCCC--------------CcHHHHHHHHH---------CCCeEEEECC-----CHH----HHH
Confidence 445677778999988873221 11345555432 1355555432 223 466
Q ss_pred HhHhcCCcEEEecCC-------------------CC-HHHHHHHHHhCCCCceeeeeeecCCC-CCCCCHHHHHhcCCCE
Q 012478 248 AFADAGADVLFIDAL-------------------AS-KEEMKAFCEISPLVPKMANMLEGGGK-TPILNPLELEELGFKL 306 (462)
Q Consensus 248 Ay~eAGAD~Ifie~~-------------------~s-~eei~~i~~~v~~vP~~~N~l~~~g~-tP~ls~~eL~~lGv~~ 306 (462)
...++|||.|.+++. .. .+.++++.+.+. +|+++ . ||- +| -...++-++|...
T Consensus 160 ~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~-iPVia---a-GGI~~~-~~~~~~l~~GAd~ 233 (369)
T 3bw2_A 160 AVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVD-IPVVA---A-GGIMRG-GQIAAVLAAGADA 233 (369)
T ss_dssp HHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCS-SCEEE---E-SSCCSH-HHHHHHHHTTCSE
T ss_pred HHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhcC-ceEEE---E-CCCCCH-HHHHHHHHcCCCE
Confidence 778899999998542 12 566777777664 56543 2 343 22 2356677789999
Q ss_pred EeccchHHH
Q 012478 307 VAYPLSLIG 315 (462)
Q Consensus 307 V~yp~~ll~ 315 (462)
|..+..++.
T Consensus 234 V~vGs~~~~ 242 (369)
T 3bw2_A 234 AQLGTAFLA 242 (369)
T ss_dssp EEESHHHHT
T ss_pred EEEChHHhC
Confidence 999887764
No 269
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=92.52 E-value=4 Score=39.14 Aligned_cols=181 Identities=16% Similarity=0.186 Sum_probs=103.0
Q ss_pred cccCChHHHHHHHHhCCcEEEec-cHHHHhhhccCCCCCC-CCHHHHHHHHH-HHHhhcCCcEEEeC-----CCCCCCH-
Q 012478 94 PACFDALSAKLVEKSGFSFCFTS-GFSISAARLALPDTGF-ISYGEMVDQGQ-LITQAVSIPVIGDG-----DNGYGNA- 164 (462)
Q Consensus 94 p~ayDalSArl~e~aGfdaI~vS-G~avSas~lG~PD~g~-vsl~Eml~~~~-~I~ra~~iPVIaD~-----DtGyG~~- 164 (462)
.+|.+.-+|..+++.|++-|=+- +++ .| |+ -|+..+ ..++ . ++.+++||.+=+ ||=|.+.
T Consensus 6 vc~~s~~~a~~A~~~GAdRIELc~~L~-----~G----GlTPS~g~i-~~~~~~-~~~~~ipV~vMIRPR~GdF~Ys~~E 74 (224)
T 2bdq_A 6 FCAENLTDLTRLDKAIISRVELCDNLA-----VG----GTTPSYGVI-KEANQY-LHEKGISVAVMIRPRGGNFVYNDLE 74 (224)
T ss_dssp EEEETTTTGGGCCTTTCCEEEEEBCGG-----GT----CBCCCHHHH-HHHHHH-HHHTTCEEEEECCSSSSCSCCCHHH
T ss_pred EEECCHHHHHHHHHcCCCEEEEcCCcc-----cC----CcCCCHHHH-HHHHHh-hhhcCCceEEEECCCCCCCcCCHHH
Confidence 46788889999999999977654 332 12 22 233333 3332 2 466789987644 3446643
Q ss_pred -HHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEec-chhhcccHHHH
Q 012478 165 -MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVART-DSRQALSLEES 242 (462)
Q Consensus 165 -~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiART-DA~~~~gldeA 242 (462)
....+-++.+.++|++||.+ +-.. ..|+ ++.+ +++..+++.. +-+ +..=|- |.....+..++
T Consensus 75 ~~~M~~Di~~~~~~GadGvV~-G~Lt--~dg~------iD~~----~~~~Li~~a~--~~~-vTFHRAFD~~~~~d~~~a 138 (224)
T 2bdq_A 75 LRIMEEDILRAVELESDALVL-GILT--SNNH------IDTE----AIEQLLPATQ--GLP-LVFHMAFDVIPKSDQKKS 138 (224)
T ss_dssp HHHHHHHHHHHHHTTCSEEEE-CCBC--TTSS------BCHH----HHHHHHHHHT--TCC-EEECGGGGGSCTTTHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEE-eeEC--CCCC------cCHH----HHHHHHHHhC--CCe-EEEECchhccCCcCHHHH
Confidence 24445699999999999998 2111 1122 4444 2333333333 112 333341 22111355666
Q ss_pred HHHHHHhHhcCCcEEEecCC-------CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHH-hcCCCEEe
Q 012478 243 LRRSRAFADAGADVLFIDAL-------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE-ELGFKLVA 308 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~-------~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~-~lGv~~V~ 308 (462)
++.. .+.|.|-|+-.+- ...+.++++.+...+ -+.++.++|-++ -...+|. +.|++-+-
T Consensus 139 le~L---~~lGv~rILTSG~~~~~~a~~g~~~L~~Lv~~a~~---ri~Im~GgGV~~-~Ni~~l~~~tGv~e~H 205 (224)
T 2bdq_A 139 IDQL---VALGFTRILLHGSSNGEPIIENIKHIKALVEYANN---RIEIMVGGGVTA-ENYQYICQETGVKQAH 205 (224)
T ss_dssp HHHH---HHTTCCEEEECSCSSCCCGGGGHHHHHHHHHHHTT---SSEEEECSSCCT-TTHHHHHHHHTCCEEE
T ss_pred HHHH---HHcCCCEEECCCCCCCCcHHHHHHHHHHHHHhhCC---CeEEEeCCCCCH-HHHHHHHHhhCCCEEc
Confidence 6654 4569999997643 224677777765332 245667767554 3566765 68987654
No 270
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=92.44 E-value=1.7 Score=44.23 Aligned_cols=123 Identities=11% Similarity=-0.009 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcc-cHHHHHH
Q 012478 166 NVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQAL-SLEESLR 244 (462)
Q Consensus 166 nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~-gldeAI~ 244 (462)
.+.+.++++.+.|...+|| + +.|.. -.+.++-+++|+|++++. |+++.|.. |+.... .+++|++
T Consensus 160 ~~~~~a~~~~~~G~~~~K~-~-----k~g~~----~~~~~~d~e~v~avR~a~---G~d~~l~v--DaN~~~~~~~~A~~ 224 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKV-C-----VPIKA----DWSTKEVAYYLRELRGIL---GHDTDMMV--DYLYRFTDWYEVAR 224 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEE-E-----CCTTC----CCCHHHHHHHHHHHHHHH---CSSSEEEE--ECTTCCCCHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEe-C-----ccCCC----ccCHHHHHHHHHHHHHHh---CCCCeEEE--eCCCCCCCHHHHHH
Confidence 4556788888999999999 2 22321 124577788999888774 67776653 777777 8899999
Q ss_pred HHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHH---HHHhcC-CCEEeccchH
Q 012478 245 RSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPL---ELEELG-FKLVAYPLSL 313 (462)
Q Consensus 245 RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~---eL~~lG-v~~V~yp~~l 313 (462)
-++++.+.|.+. +|-+ .+.+.++++.+.++ +|+..+ +. ..+.. ++-+.| +..|..-..-
T Consensus 225 ~~~~L~~~~i~~--iEeP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~l~~~~~d~v~~k~~~ 290 (394)
T 3mkc_A 225 LLNSIEDLELYF--AEATLQHDDLSGHAKLVENTR-SRICGA-----EM--STTRFEAEEWITKGKVHLLQSDYNR 290 (394)
T ss_dssp HHHHTGGGCCSE--EESCSCTTCHHHHHHHHHHCS-SCBEEC-----TT--CCHHHHHHHHHHTTCCSEECCCTTT
T ss_pred HHHHhhhcCCeE--EECCCCchhHHHHHHHHhhCC-CCEEeC-----CC--CCCHHHHHHHHHcCCCCeEecCccc
Confidence 999999998765 4543 36788889988876 676533 21 12344 444445 6666654443
No 271
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=92.30 E-value=5.6 Score=40.08 Aligned_cols=162 Identities=12% Similarity=-0.003 Sum_probs=94.0
Q ss_pred CCHHHHHHHHHHHH-hhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc-EEEeCCCCCCCCCCCCC-CCcc-cCHHHHH
Q 012478 133 ISYGEMVDQGQLIT-QAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA-GIILEDQVSPKGCGHTR-GRKV-VSREEAV 208 (462)
Q Consensus 133 vsl~Eml~~~~~I~-ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaa-GI~IEDq~~PKrCGH~~-gk~L-vp~ee~~ 208 (462)
..++.++++.+... +..+.||++-+= | .++....+.++++.++|++ +|-|.=. |-+.. +..+ .+.+...
T Consensus 110 ~G~~~~~~~l~~~~~~~~~~pvivsI~-g-~~~~d~~~~a~~l~~~g~~d~ielNis-----CPn~~G~~~l~~~~e~l~ 182 (345)
T 3oix_A 110 LGINYYLDYVTELQKQPDSKNHFLSLV-G-MSPEETHTILXMVEASKYQGLVELNLS-----CPNVPGXPQIAYDFETTD 182 (345)
T ss_dssp SCHHHHHHHHHHHHHSTTCCCCEEEEC-C-SSHHHHHHHHHHHHHSSCCSEEEEECS-----CCCSTTCCCGGGCHHHHH
T ss_pred hhHHHHHHHHHHHhhccCCCCEEEEec-C-CCHHHHHHHHHHHhccCCCcEEEEecC-----CCCcCCchhhcCCHHHHH
Confidence 45788888777643 356799998762 2 2567888889999889988 8877544 32322 2334 3556555
Q ss_pred HHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEE-------------ecC--------------
Q 012478 209 MRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLF-------------IDA-------------- 261 (462)
Q Consensus 209 ~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~If-------------ie~-------------- 261 (462)
+-+++++++. +.++.|-=|-| .+.++.. ++..++|||.|- ++.
T Consensus 183 ~il~av~~~~---~~PV~vKi~p~----~~~~~~a---~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGl 252 (345)
T 3oix_A 183 QILSEVFTYF---TKPLGIKLPPY----FDIVHFD---QAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGI 252 (345)
T ss_dssp HHHHHHTTTC---CSCEEEEECCC----CCHHHHH---HHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEE
T ss_pred HHHHHHHHHh---CCCeEEEECCC----CCHHHHH---HHHHHhCCCceEEEEeecccccceeeccCccccccccccCCc
Confidence 5555555443 24566666655 1334433 444455555431 221
Q ss_pred --CC----CHHHHHHHHHhCC-CCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012478 262 --LA----SKEEMKAFCEISP-LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 262 --~~----s~eei~~i~~~v~-~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
.. +.+.+.++.+.++ .+|+..| ||-.-.-+..++-++|.+.|-.+..++.
T Consensus 253 SG~ai~p~a~~~v~~i~~~~~~~ipIIg~----GGI~s~~da~~~l~aGAd~V~igra~~~ 309 (345)
T 3oix_A 253 GGDYVKPTALANVHAFYKRLNPSIQIIGT----GGVXTGRDAFEHILCGASMVQIGTALHQ 309 (345)
T ss_dssp EEGGGHHHHHHHHHHHHTTSCTTSEEEEE----SSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred CCccccHHHHHHHHHHHHHcCCCCcEEEE----CCCCChHHHHHHHHhCCCEEEEChHHHh
Confidence 00 1356777777775 3666543 3422112334455689999998887443
No 272
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=92.28 E-value=1.1 Score=45.52 Aligned_cols=128 Identities=17% Similarity=0.262 Sum_probs=86.3
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEe
Q 012478 151 IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVAR 230 (462)
Q Consensus 151 iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiAR 230 (462)
+|+-+- |. +++.+.+.++++.+.|...+||- .|+ +.++-+++|+|++++. |+++.| +
T Consensus 147 v~~y~~---g~-~~e~~~~~a~~~~~~G~~~iKlK-------~g~-------~~~~d~~~v~avR~a~---g~~~~l--~ 203 (392)
T 3ddm_A 147 IGVYAS---GI-NPENPEDVVARKAAEGYRAFKLK-------VGF-------DDARDVRNALHVRELL---GAATPL--M 203 (392)
T ss_dssp EEEEEE---EE-CSSSHHHHHHHHHHHTCCCEEEE-------CSS-------CHHHHHHHHHHHHHHH---CSSSCE--E
T ss_pred eeEEee---cC-CHHHHHHHHHHHHHcCCCEEEEe-------cCC-------CHHHHHHHHHHHHHhc---CCCceE--E
Confidence 666543 21 24567777888888999999992 343 4567788999888774 566655 3
Q ss_pred cchhhcccHHHHHHHHHHhHhcCCcEEEecCC---CC-HHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHh---cC
Q 012478 231 TDSRQALSLEESLRRSRAFADAGADVLFIDAL---AS-KEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE---LG 303 (462)
Q Consensus 231 TDA~~~~gldeAI~RakAy~eAGAD~Ifie~~---~s-~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~---lG 303 (462)
.|+.....+++|++-++++.+.|.+ |+|-+ .+ .+.++++.+..+ +|+..+ .. ..+..++.+ .|
T Consensus 204 vDaN~~~~~~~A~~~~~~L~~~~i~--~iEeP~~~~d~~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~ 273 (392)
T 3ddm_A 204 ADANQGWDLPRARQMAQRLGPAQLD--WLEEPLRADRPAAEWAELAQAAP-MPLAGG-----EN--IAGVAAFETALAAR 273 (392)
T ss_dssp EECTTCCCHHHHHHHHHHHGGGCCS--EEECCSCTTSCHHHHHHHHHHCS-SCEEEC-----TT--CCSHHHHHHHHHHT
T ss_pred EeCCCCCCHHHHHHHHHHHHHhCCC--EEECCCCccchHHHHHHHHHhcC-CCEEeC-----CC--CCCHHHHHHHHHcC
Confidence 4777778899999999999999876 45543 24 778899988876 676543 21 235555544 35
Q ss_pred -CCEEeccc
Q 012478 304 -FKLVAYPL 311 (462)
Q Consensus 304 -v~~V~yp~ 311 (462)
+..|..-.
T Consensus 274 a~d~v~~k~ 282 (392)
T 3ddm_A 274 SLRVMQPDL 282 (392)
T ss_dssp CEEEECCCT
T ss_pred CCCEEEeCc
Confidence 55555433
No 273
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=92.26 E-value=5.1 Score=42.92 Aligned_cols=203 Identities=16% Similarity=0.138 Sum_probs=107.9
Q ss_pred HHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEE--EeCCC--CCCC-HHH-HHHHHHH
Q 012478 100 LSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVI--GDGDN--GYGN-AMN-VKRTVKG 173 (462)
Q Consensus 100 lSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVI--aD~Dt--GyG~-~~n-v~rtVk~ 173 (462)
--|+.+.++|++.|=+++.+.--+.+.+- .-+-.|++..++... .+.++. +-..+ ||.. +.+ +.+.++.
T Consensus 51 ~Ia~~L~~~Gv~~IE~G~patF~~~~rfl---~~d~~e~lr~l~~~~--~~~~l~~L~R~~N~~G~~~ypddv~~~~ve~ 125 (539)
T 1rqb_A 51 GACADIDAAGYWSVECWGGATYDSCIRFL---NEDPWERLRTFRKLM--PNSRLQMLLRGQNLLGYRHYNDEVVDRFVDK 125 (539)
T ss_dssp GGHHHHHHTTCSEEEEEETTHHHHHHHTS---CCCHHHHHHHHHHHC--TTSCEEEEECGGGTTSSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCcccccccchhcc---CCCHHHHHHHHHHhC--CCCEEEEEeccccccCcccCcccccHHHHHH
Confidence 44677888999999988522100111110 012344444444321 234444 33343 6764 333 5677999
Q ss_pred HHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeE-EEEecchhhcccHHHHHHHHHHhHhc
Q 012478 174 YIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIV-IVARTDSRQALSLEESLRRSRAFADA 252 (462)
Q Consensus 174 l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~v-IiARTDA~~~~gldeAI~RakAy~eA 252 (462)
..++|++.|+|=+..+. + + .|+.+++..++.|.... .+.=+|+. ....+..++-++++.++
T Consensus 126 a~~aGvd~vrIf~s~sd----------~---~----ni~~~i~~ak~~G~~v~~~i~~~~~~-~~~~e~~~~~a~~l~~~ 187 (539)
T 1rqb_A 126 SAENGMDVFRVFDAMND----------P---R----NMAHAMAAVKKAGKHAQGTICYTISP-VHTVEGYVKLAGQLLDM 187 (539)
T ss_dssp HHHTTCCEEEECCTTCC----------T---H----HHHHHHHHHHHTTCEEEEEEECCCST-TCCHHHHHHHHHHHHHT
T ss_pred HHhCCCCEEEEEEehhH----------H---H----HHHHHHHHHHHCCCeEEEEEEeeeCC-CCCHHHHHHHHHHHHHc
Confidence 99999999999876421 1 2 33344444444343221 12223432 34688999999999999
Q ss_pred CCcEEEec---CCCCHHHHHHHH----HhCC-CCceeeeeeecCCCCCCCC---HHHHHhcCCCEEeccchHH--HHHHH
Q 012478 253 GADVLFID---ALASKEEMKAFC----EISP-LVPKMANMLEGGGKTPILN---PLELEELGFKLVAYPLSLI--GVSVR 319 (462)
Q Consensus 253 GAD~Ifie---~~~s~eei~~i~----~~v~-~vP~~~N~l~~~g~tP~ls---~~eL~~lGv~~V~yp~~ll--~aa~~ 319 (462)
|||.|.+. |+-.+.++.+++ +.+| .+| +.+ .... +..+. .-.--++|+++|=-....+ ++..-
T Consensus 188 Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~i~--I~~-H~Hn-d~GlAvAN~laAveAGa~~VD~ti~g~GertGN~ 263 (539)
T 1rqb_A 188 GADSIALKDMAALLKPQPAYDIIKAIKDTYGQKTQ--INL-HCHS-TTGVTEVSLMKAIEAGVDVVDTAISSMSLGPGHN 263 (539)
T ss_dssp TCSEEEEEETTCCCCHHHHHHHHHHHHHHHCTTCC--EEE-EEBC-TTSCHHHHHHHHHHTTCSEEEEBCGGGCSTTSBC
T ss_pred CCCEEEeCCCCCCcCHHHHHHHHHHHHHhcCCCce--EEE-EeCC-CCChHHHHHHHHHHhCCCEEEEeccccCCCccCh
Confidence 99999884 445566665555 4454 333 222 1111 22232 2334467888775443322 23333
Q ss_pred HHHHHHHHHH
Q 012478 320 AMQDALTAIK 329 (462)
Q Consensus 320 Am~~~l~~l~ 329 (462)
++.+.+..|.
T Consensus 264 ~lE~lv~~L~ 273 (539)
T 1rqb_A 264 PTESVAEMLE 273 (539)
T ss_dssp BHHHHHHHTT
T ss_pred hHHHHHHHHH
Confidence 4444444444
No 274
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=92.23 E-value=1.7 Score=44.24 Aligned_cols=150 Identities=17% Similarity=0.153 Sum_probs=93.1
Q ss_pred HHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcC-CcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012478 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVS-IPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (462)
Q Consensus 102 Arl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~-iPVIaD~DtGyG~~~nv~rtVk~l~~AGaa 180 (462)
|+.+.++|++.|=+++...+ | .| .+.++++++... ..+.+=. -++...+.++++.+..+|+.
T Consensus 40 a~~L~~~Gv~~IE~g~p~~~------~-------~d-~e~v~~i~~~~~~~~i~~l~---r~~~~di~~a~~al~~ag~~ 102 (370)
T 3rmj_A 40 ARQLEKLGVDIIEAGFAAAS------P-------GD-FEAVNAIAKTITKSTVCSLS---RAIERDIRQAGEAVAPAPKK 102 (370)
T ss_dssp HHHHHHHTCSEEEEEEGGGC------H-------HH-HHHHHHHHTTCSSSEEEEEE---ESSHHHHHHHHHHHTTSSSE
T ss_pred HHHHHHcCCCEEEEeCCCCC------H-------HH-HHHHHHHHHhCCCCeEEEEe---cCCHHHHHHHHHHHhhCCCC
Confidence 45677899998887653310 1 12 233455554432 3332211 13566777777777779999
Q ss_pred EEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEec
Q 012478 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFID 260 (462)
Q Consensus 181 GI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie 260 (462)
-|+|=+.+++- |...+-=.+.+|..+++..+++..++.|.++.+-+ .|+ .....+.+++-++++.++|||.|.+.
T Consensus 103 ~v~if~~~Sd~---h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~-ed~-~r~~~~~~~~~~~~~~~~Ga~~i~l~ 177 (370)
T 3rmj_A 103 RIHTFIATSPI---HMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSC-EDA-LRSEIDFLAEICGAVIEAGATTINIP 177 (370)
T ss_dssp EEEEEEECSHH---HHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEE-ETG-GGSCHHHHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEEecCcHH---HHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEec-CCC-CccCHHHHHHHHHHHHHcCCCEEEec
Confidence 99998876431 21111123678999999888877776665543332 232 23467888999999999999999875
Q ss_pred ---CCCCHHHHHHHHH
Q 012478 261 ---ALASKEEMKAFCE 273 (462)
Q Consensus 261 ---~~~s~eei~~i~~ 273 (462)
|..++.++.++.+
T Consensus 178 DT~G~~~P~~~~~lv~ 193 (370)
T 3rmj_A 178 DTVGYSIPYKTEEFFR 193 (370)
T ss_dssp CSSSCCCHHHHHHHHH
T ss_pred CccCCcCHHHHHHHHH
Confidence 3455666655554
No 275
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=92.19 E-value=1 Score=45.20 Aligned_cols=124 Identities=19% Similarity=0.234 Sum_probs=85.4
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccH
Q 012478 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (462)
Q Consensus 160 GyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gl 239 (462)
|.++++.+.+.++++.+.|...+||- .|. +.++-+++|++++++. |+++.+. .|+......
T Consensus 137 ~~~~~e~~~~~a~~~~~~G~~~~K~K-------vG~-------~~~~d~~~v~avR~~~---g~~~~l~--vDaN~~~~~ 197 (368)
T 3q45_A 137 SIDEPHKMAADAVQIKKNGFEIIKVK-------VGG-------SKELDVERIRMIREAA---GDSITLR--IDANQGWSV 197 (368)
T ss_dssp CSCCHHHHHHHHHHHHHTTCSEEEEE-------CCS-------CHHHHHHHHHHHHHHH---CSSSEEE--EECTTCBCH
T ss_pred cCCCHHHHHHHHHHHHHcCCCeEEEE-------ecC-------CHHHHHHHHHHHHHHh---CCCCeEE--EECCCCCCh
Confidence 55678888888899999999999993 232 2466788998888774 5676654 377777889
Q ss_pred HHHHHHHHHhHhcCCcEEEecCCC---CHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHH---HhcC-CCEEeccch
Q 012478 240 EESLRRSRAFADAGADVLFIDALA---SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLEL---EELG-FKLVAYPLS 312 (462)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~~---s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL---~~lG-v~~V~yp~~ 312 (462)
++|++.++++.+.|.+ |+|-+- +.+.++++.+..+ +|+.++ .. ..+..++ -+.| ++.|..-..
T Consensus 198 ~~A~~~~~~l~~~~i~--~iEqP~~~~~~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~~~~~~~d~v~~k~~ 267 (368)
T 3q45_A 198 ETAIETLTLLEPYNIQ--HCEEPVSRNLYTALPKIRQACR-IPIMAD-----ES--CCNSFDAERLIQIQACDSFNLKLS 267 (368)
T ss_dssp HHHHHHHHHHGGGCCS--CEECCBCGGGGGGHHHHHHTCS-SCEEES-----TT--CCSHHHHHHHHHTTCCSEEEECTT
T ss_pred HHHHHHHHHHhhcCCC--EEECCCChhHHHHHHHHHhhCC-CCEEEc-----CC--cCCHHHHHHHHHcCCCCeEEechh
Confidence 9999999999998765 455442 3567888888765 676543 21 2355444 3444 666655444
No 276
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=92.19 E-value=4.8 Score=40.87 Aligned_cols=146 Identities=13% Similarity=0.080 Sum_probs=90.6
Q ss_pred HHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhh-cCCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012478 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQA-VSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (462)
Q Consensus 102 Arl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra-~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaa 180 (462)
|+.+.++|++.|=+++.+. ..++.+.++.+++. .+.++.+=.- +...+ ++...++|+.
T Consensus 31 a~~L~~~Gv~~IE~g~p~~--------------~~~~~~~~~~i~~~~~~~~v~~~~r---~~~~d----i~~a~~~g~~ 89 (382)
T 2ztj_A 31 AKALDEFGIEYIEVTTPVA--------------SPQSRKDAEVLASLGLKAKVVTHIQ---CRLDA----AKVAVETGVQ 89 (382)
T ss_dssp HHHHHHHTCSEEEECCTTS--------------CHHHHHHHHHHHTSCCSSEEEEEEE---SCHHH----HHHHHHTTCS
T ss_pred HHHHHHcCcCEEEEcCCcC--------------CHHHHHHHHHHHhcCCCcEEEEEcc---cChhh----HHHHHHcCCC
Confidence 5667789999998864221 13445666776653 2344543211 22333 4667789999
Q ss_pred EEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEE-EecchhhcccHHHHHHHHHHhHhcCCcEEEe
Q 012478 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV-ARTDSRQALSLEESLRRSRAFADAGADVLFI 259 (462)
Q Consensus 181 GI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIi-ARTDA~~~~gldeAI~RakAy~eAGAD~Ifi 259 (462)
.|+|=+.+++ -|.. +--.+.+|.+++++.+++..++.|..+.+. .=+|+. ....+..++-+++..++ ||.|.+
T Consensus 90 ~v~i~~~~s~---~~~~-~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~-~~~~~~~~~~~~~~~~~-a~~i~l 163 (382)
T 2ztj_A 90 GIDLLFGTSK---YLRA-PHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTF-RSEEQDLLAVYEAVAPY-VDRVGL 163 (382)
T ss_dssp EEEEEECC------------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTT-TSCHHHHHHHHHHHGGG-CSEEEE
T ss_pred EEEEEeccCH---HHHH-HhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCC-CCCHHHHHHHHHHHHHh-cCEEEe
Confidence 9999877642 3544 444577888888888887777766223222 224553 34678899999999999 999987
Q ss_pred c---CCCCHHHHHHHHHh
Q 012478 260 D---ALASKEEMKAFCEI 274 (462)
Q Consensus 260 e---~~~s~eei~~i~~~ 274 (462)
. |.-.+.++.++.+.
T Consensus 164 ~DT~G~~~P~~~~~lv~~ 181 (382)
T 2ztj_A 164 ADTVGVATPRQVYALVRE 181 (382)
T ss_dssp EETTSCCCHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHH
Confidence 4 44566676666544
No 277
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=92.17 E-value=0.65 Score=46.41 Aligned_cols=126 Identities=16% Similarity=0.209 Sum_probs=86.1
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccH
Q 012478 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (462)
Q Consensus 160 GyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gl 239 (462)
|.+++..+.+.++.+.+.|...+||- +|. +.++-+++|+|++++. |+++.+. .|+....+.
T Consensus 137 ~~~~~~~~~~~a~~~~~~G~~~~K~K-------~G~-------~~~~d~~~v~avR~~~---g~~~~l~--vDan~~~~~ 197 (356)
T 3ro6_B 137 GIKPVEETLAEAREHLALGFRVLKVK-------LCG-------DEEQDFERLRRLHETL---AGRAVVR--VDPNQSYDR 197 (356)
T ss_dssp CSCCHHHHHHHHHHHHHTTCCEEEEE-------CCS-------CHHHHHHHHHHHHHHH---TTSSEEE--EECTTCCCH
T ss_pred cCCCHHHHHHHHHHHHHcCCCEEEEE-------eCC-------CHHHHHHHHHHHHHHh---CCCCEEE--EeCCCCCCH
Confidence 55678888888899999999999993 232 4567788999888774 5666554 377777789
Q ss_pred HHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHH---HHHhcC--CCEEeccc
Q 012478 240 EESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPL---ELEELG--FKLVAYPL 311 (462)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~---eL~~lG--v~~V~yp~ 311 (462)
++|++-++++.+.|.+ |+|-+ .+.+.++++.+..+ +|+..+ .. ..+.. ++-+.| ++.|..-.
T Consensus 198 ~~a~~~~~~l~~~~i~--~iEqP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~~~~~~~~d~v~~k~ 267 (356)
T 3ro6_B 198 DGLLRLDRLVQELGIE--FIEQPFPAGRTDWLRALPKAIR-RRIAAD-----ES--LLGPADAFALAAPPAACGIFNIKL 267 (356)
T ss_dssp HHHHHHHHHHHHTTCC--CEECCSCTTCHHHHHTSCHHHH-HTEEES-----TT--CCSHHHHHHHHSSSCSCSEEEECH
T ss_pred HHHHHHHHHHHhcCCC--EEECCCCCCcHHHHHHHHhcCC-CCEEeC-----Cc--CCCHHHHHHHHhcCCcCCEEEEcc
Confidence 9999999999998765 45543 25667777766654 566543 21 23444 445554 77766655
Q ss_pred hHH
Q 012478 312 SLI 314 (462)
Q Consensus 312 ~ll 314 (462)
.-.
T Consensus 268 ~~~ 270 (356)
T 3ro6_B 268 MKC 270 (356)
T ss_dssp HHH
T ss_pred ccc
Confidence 433
No 278
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=92.17 E-value=1.4 Score=44.33 Aligned_cols=101 Identities=18% Similarity=0.268 Sum_probs=75.4
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccH
Q 012478 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (462)
Q Consensus 160 GyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gl 239 (462)
|+.++..+.+.++++.+.|...+||- .|+ -+.++-+++|++++++.. |+++.+ +.|+-.....
T Consensus 147 ~~~~~~~~~~~a~~~~~~G~~~~KiK-------vg~------~~~~~di~~v~~vr~a~~--g~~~~l--~vDaN~~~~~ 209 (376)
T 4h2h_A 147 GVMEPDEAARQALEKQREGYSRLQVK-------LGA------RPIEIDIEAIRKVWEAVR--GTGIAL--AADGNRGWTT 209 (376)
T ss_dssp CSCCHHHHHHHHHHHHHHTCSEEEEE-------CCS------SCHHHHHHHHHHHHHHHT--TSCCEE--EEECTTCCCH
T ss_pred ccCCHHHHHHHHHHHHhcCceEEEEe-------cCC------CCHHHHHHHHHHHHhhcc--CCeeEE--EEeeccCCCH
Confidence 56678888888888889999999993 232 134566788888887753 566654 5688888899
Q ss_pred HHHHHHHHHhHhcCCcEEEecCC-CCHHHHHHHHHhCCCCcee
Q 012478 240 EESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKM 281 (462)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~ 281 (462)
++|++.++++.+.+ +|+|-+ .+.+.++++.+..+ +|+.
T Consensus 210 ~~A~~~~~~l~~~~---~~iEeP~~~~~~~~~l~~~~~-~pia 248 (376)
T 4h2h_A 210 RDALRFSRECPDIP---FVMEQPCNSFEDLEAIRPLCH-HALY 248 (376)
T ss_dssp HHHHHHHHHCTTSC---EEEESCSSSHHHHHHHGGGCC-SCEE
T ss_pred HHHHHHHHHHhhcc---ccccCCcchhhhHhhhhhccc-Cccc
Confidence 99999999998775 377765 46688888888765 5654
No 279
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=92.17 E-value=4.6 Score=38.61 Aligned_cols=185 Identities=12% Similarity=0.060 Sum_probs=105.4
Q ss_pred ceEecccCChHHH-HHHHHhCCcEEEe-ccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCC-HHH
Q 012478 90 VHQGPACFDALSA-KLVEKSGFSFCFT-SGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGN-AMN 166 (462)
Q Consensus 90 ~iv~p~ayDalSA-rl~e~aGfdaI~v-SG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~-~~n 166 (462)
.+++.-..|.-.| .++++.+-...++ -|+.+-. ..|. ..++.+.+ .+.+|++|.=.+ + +..
T Consensus 11 LivALD~~~~~~al~l~~~~~~~v~~~Kvg~~lf~-~~G~------------~~v~~L~~-~g~~iflDlK~~--DI~nT 74 (239)
T 3tr2_A 11 VIVAIDAGTVEQARAQINPLTPELCHLKIGSILFT-RYGP------------AFVEELMQ-KGYRIFLDLKFY--DIPQT 74 (239)
T ss_dssp EEEECCCSSHHHHHHHHTTCCTTTCEEEEEHHHHH-HHHH------------HHHHHHHH-TTCCEEEEEEEC--SCHHH
T ss_pred eEEEeCCCCHHHHHHHHHHhCCcccEEEeCHHHHH-hhCH------------HHHHHHHh-cCCCEEEEeccc--ccchH
Confidence 4555566666555 4445554332222 2333321 2342 12333433 378999998864 5 345
Q ss_pred HHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhC--CCeEEEE---ec--chh--h--
Q 012478 167 VKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESG--SDIVIVA---RT--DSR--Q-- 235 (462)
Q Consensus 167 v~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g--~d~vIiA---RT--DA~--~-- 235 (462)
+...++.+.+.|++.+.+--.. | .+-+++++++..+.+ ....++| -| +.. .
T Consensus 75 v~~~~~~~~~~gad~vTvh~~~---------G---------~~~~~~a~~~~~~~~~~~~~~l~~Vt~LTS~~~~~l~~~ 136 (239)
T 3tr2_A 75 VAGACRAVAELGVWMMNIHISG---------G---------RTMMETVVNALQSITLKEKPLLIGVTILTSLDGSDLKTL 136 (239)
T ss_dssp HHHHHHHHHHTTCSEEEEEGGG---------C---------HHHHHHHHHHHHTCCCSSCCEEEEECSCTTCCHHHHHHT
T ss_pred HHHHHHHHHhCCCCEEEEeccC---------C---------HHHHHHHHHHHHhcCcCCCceEEEEEEEeeCCHHHHHhc
Confidence 6667888999999999883321 1 224566666655321 1233444 22 211 1
Q ss_pred --cccH-HHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCC----------CCCHHHHHhc
Q 012478 236 --ALSL-EESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTP----------ILNPLELEEL 302 (462)
Q Consensus 236 --~~gl-deAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP----------~ls~~eL~~l 302 (462)
...+ +.++++|+...++|.|.++.. ..|...+.+..+ |.++-+++ |-.| ..|+++..+.
T Consensus 137 g~~~~~~~~v~~~A~~a~~~g~~GvV~s----~~e~~~ir~~~~--~~fl~vtP--GIr~~g~~~~dQ~rv~t~~~~~~a 208 (239)
T 3tr2_A 137 GIQEKVPDIVCRMATLAKSAGLDGVVCS----AQEAALLRKQFD--RNFLLVTP--GIRLETDEKGDQKRVMTPRAAIQA 208 (239)
T ss_dssp TCCSCHHHHHHHHHHHHHHHTCCEEECC----HHHHHHHHTTCC--TTSEEEEC--CBC----------CCBCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEEEC----chhHHHHHHhcC--CCcEEECC--CcCCCCCCcCcccccCCHHHHHHc
Confidence 1123 456778999999999999854 356666655543 22222333 2112 1368889999
Q ss_pred CCCEEeccchHHHH
Q 012478 303 GFKLVAYPLSLIGV 316 (462)
Q Consensus 303 Gv~~V~yp~~ll~a 316 (462)
|.+.++.|...+.+
T Consensus 209 Gad~lVvGr~I~~a 222 (239)
T 3tr2_A 209 GSDYLVIGRPITQS 222 (239)
T ss_dssp TCSEEEECHHHHTS
T ss_pred CCCEEEEChHHhCC
Confidence 99999999887764
No 280
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=92.15 E-value=6.6 Score=38.72 Aligned_cols=138 Identities=11% Similarity=0.046 Sum_probs=84.8
Q ss_pred ChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHh---hcCCcEEE------eCCC-CCCCHHHH
Q 012478 98 DALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQ---AVSIPVIG------DGDN-GYGNAMNV 167 (462)
Q Consensus 98 DalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~r---a~~iPVIa------D~Dt-GyG~~~nv 167 (462)
+---.+.+-++|++.+-+.... +- .+-.-- -..|.+|.++.+..+.+ ..++.|.+ +.++ |--++..+
T Consensus 83 ~~~~i~~a~~~g~~~v~i~~~~-sd-~~~~~~-l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~ 159 (307)
T 1ydo_A 83 NQRGLENALEGGINEACVFMSA-SE-THNRKN-INKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQV 159 (307)
T ss_dssp SHHHHHHHHHHTCSEEEEEEES-SH-HHHHTT-TCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHH
T ss_pred CHHhHHHHHhCCcCEEEEEeec-CH-HHHHHH-hCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHH
Confidence 3344556667899987766311 10 111111 22588888887776654 34566643 3333 22357889
Q ss_pred HHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHH
Q 012478 168 KRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSR 247 (462)
Q Consensus 168 ~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~Rak 247 (462)
.+.++.+.++|+.-|.|-|.. | +..++++.+.|+++++.-. +..+-+-...|. .-|+.-+.
T Consensus 160 ~~~~~~~~~~Ga~~i~l~DT~-----G------~~~P~~v~~lv~~l~~~~~--~~~l~~H~Hnd~------Gla~AN~l 220 (307)
T 1ydo_A 160 IRLSEALFEFGISELSLGDTI-----G------AANPAQVETVLEALLARFP--ANQIALHFHDTR------GTALANMV 220 (307)
T ss_dssp HHHHHHHHHHTCSCEEEECSS-----C------CCCHHHHHHHHHHHHTTSC--GGGEEEECBGGG------SCHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcCCC-----C------CcCHHHHHHHHHHHHHhCC--CCeEEEEECCCC------chHHHHHH
Confidence 999999999999999999986 3 3345677777777765421 112333333332 23466777
Q ss_pred HhHhcCCcEE
Q 012478 248 AFADAGADVL 257 (462)
Q Consensus 248 Ay~eAGAD~I 257 (462)
+..+|||+.|
T Consensus 221 aAv~aGa~~v 230 (307)
T 1ydo_A 221 TALQMGITVF 230 (307)
T ss_dssp HHHHHTCCEE
T ss_pred HHHHhCCCEE
Confidence 8889999976
No 281
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=92.10 E-value=1.2 Score=42.27 Aligned_cols=138 Identities=17% Similarity=0.131 Sum_probs=83.7
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCC-CCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 012478 153 VIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHT-RGRKVVSREEAVMRIKAAVDARKESGSDIVIVART 231 (462)
Q Consensus 153 VIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~-~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiART 231 (462)
-++..|.|..........++..++.||+.|-+==.. |.. .| ..+++.+-|++.+++... ..+.+|--|
T Consensus 59 ~vigFP~G~~~~~~k~~e~~~Ai~~GAdevd~vini-----g~~~~g----~~~~v~~ei~~v~~a~~~--~~lkvIlet 127 (220)
T 1ub3_A 59 TVVGFPLGYQEKEVKALEAALACARGADEVDMVLHL-----GRAKAG----DLDYLEAEVRAVREAVPQ--AVLKVILET 127 (220)
T ss_dssp EEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCH-----HHHHTT----CHHHHHHHHHHHHHHSTT--SEEEEECCG
T ss_pred EEecCCCCCCchHHHHHHHHHHHHcCCCEEEecccc-----hhhhCC----CHHHHHHHHHHHHHHHcC--CCceEEEec
Confidence 345888887666555566788889999998552111 111 11 246788889998888753 356656555
Q ss_pred chhhcccHHHHHHHHHHhHhcCCcEEEec-----CCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCE
Q 012478 232 DSRQALSLEESLRRSRAFADAGADVLFID-----ALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKL 306 (462)
Q Consensus 232 DA~~~~gldeAI~RakAy~eAGAD~Ifie-----~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~ 306 (462)
..+ .-++...-++...++|||.|=.- +-.+.+.++.+.+.+. -+.++-+ .||-++ .-...++-++|..|
T Consensus 128 ~~l---~~e~i~~a~~ia~eaGADfVKTsTGf~~~gat~~dv~~m~~~vg-~~v~Vka-aGGirt-~~~al~~i~aGa~R 201 (220)
T 1ub3_A 128 GYF---SPEEIARLAEAAIRGGADFLKTSTGFGPRGASLEDVALLVRVAQ-GRAQVKA-AGGIRD-RETALRMLKAGASR 201 (220)
T ss_dssp GGS---CHHHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHT-TSSEEEE-ESSCCS-HHHHHHHHHTTCSE
T ss_pred CCC---CHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHhhC-CCCeEEE-ECCCCC-HHHHHHHHHCCCcc
Confidence 333 33566666888889999999543 3346677777776553 2333222 232232 12345566788887
Q ss_pred E
Q 012478 307 V 307 (462)
Q Consensus 307 V 307 (462)
+
T Consensus 202 i 202 (220)
T 1ub3_A 202 L 202 (220)
T ss_dssp E
T ss_pred c
Confidence 6
No 282
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=92.07 E-value=2.9 Score=43.23 Aligned_cols=145 Identities=19% Similarity=0.163 Sum_probs=78.0
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCC---CCCCCCCCC---CcccCHHHHHHHHHHHHHHHHhhCCCeEEEEe---cch
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVS---PKGCGHTRG---RKVVSREEAVMRIKAAVDARKESGSDIVIVAR---TDS 233 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~---PKrCGH~~g---k~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiAR---TDA 233 (462)
++..|...=+.|++|||+-| +=.++ +.+..+.+- ..-.-.+-...-++-|++|+++ .+.+|.+- +.+
T Consensus 52 ~Pe~V~~iH~~Yl~AGAdII--~TNTf~A~~~~l~~~G~~~~~~~~~~eln~~Av~LAreAa~~--~~~~VAGsIGP~g~ 127 (406)
T 1lt8_A 52 HPEAVRQLHREFLRAGSNVM--QTFTFYASEDKLENRGNYVLEKISGQEVNEAAADIARQVADE--GDALVAGGVSQTPS 127 (406)
T ss_dssp CHHHHHHHHHHHHHTTCSEE--ECSCTTCSSCC-------------CHHHHHHHHHHHHHHHTT--TTCEEEEEECCCHH
T ss_pred CHHHHHHHHHHHHHhCccce--eccccccCHHHHHhcCCccchhHHHHHHHHHHHHHHHHHHhc--CCCEEEEEcCCccc
Confidence 46677777899999999944 44443 111111110 0000011122223334444432 23344432 222
Q ss_pred hh-cccHHH----HHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhC--CCCceeeeeee-cCCCCCCCCHH----HHHh
Q 012478 234 RQ-ALSLEE----SLRRSRAFADAGADVLFIDALASKEEMKAFCEIS--PLVPKMANMLE-GGGKTPILNPL----ELEE 301 (462)
Q Consensus 234 ~~-~~glde----AI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v--~~vP~~~N~l~-~~g~tP~ls~~----eL~~ 301 (462)
.. ...++| --+++.++.++|+|+|++|-+++.+|++.+++.+ .++|.++.+.- ..|+...-+++ .+.+
T Consensus 128 ~l~~~s~eel~~~~~eqi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~lPv~iS~T~~~~G~l~G~~~~~~~~~l~~ 207 (406)
T 1lt8_A 128 YLSAKSETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETLIASGKPVAATMAIGPEGDLHGVPPGEAAVRLVK 207 (406)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHTCSEEEECCCSCHHHHHHHHHHHGGGTSCEEEEECCBTTBCTTCCCHHHHHHHHHT
T ss_pred ccCCCCHHHHHHHHHHHHHHHhhCCCCEEEEcccCCHHHHHHHHHHHHHhCCcEEEEEEECCCCCcCCCcHHHHHHHhhc
Confidence 11 122344 3357889999999999999999999998887643 24788888764 22222333443 3466
Q ss_pred cCCCEEeccc
Q 012478 302 LGFKLVAYPL 311 (462)
Q Consensus 302 lGv~~V~yp~ 311 (462)
+|+.-|-+-+
T Consensus 208 ~~~~avGvNC 217 (406)
T 1lt8_A 208 AGASIIGVNC 217 (406)
T ss_dssp TTCSEEEEES
T ss_pred CCCCEEEecC
Confidence 7766555444
No 283
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=92.06 E-value=1.6 Score=45.29 Aligned_cols=99 Identities=23% Similarity=0.325 Sum_probs=73.6
Q ss_pred CCHHHHHHHHHHHHH-hCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHH
Q 012478 162 GNAMNVKRTVKGYIK-AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (462)
Q Consensus 162 G~~~nv~rtVk~l~~-AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gld 240 (462)
.+++.+.+.++++.+ .|...+||-- |. .+.++-+++|+|++++. ++..| +.|+-....++
T Consensus 187 ~~~e~~~~~a~~~~~~~Gf~~~KlKv-------G~------~~~~~Di~rv~avRea~----pd~~L--~vDaN~~w~~~ 247 (441)
T 3vc5_A 187 LDPDGIVAQARLLIGEYGFRSIKLKG-------GV------FPPEQEAEAIQALRDAF----PGLPL--RLDPNAAWTVE 247 (441)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEEC-------SS------SCHHHHHHHHHHHHHHS----TTCCE--EEECTTCSCHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcc-------CC------CCHHHHHHHHHHHHHhC----CCCcE--eccCCCCCCHH
Confidence 357888888888876 5999999942 32 24566688999998876 34333 45888888899
Q ss_pred HHHHHHHHhHhcCCcEEEecCC-CCHHHHHHHHHhCCCCceeee
Q 012478 241 ESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMAN 283 (462)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N 283 (462)
+|++.++++++. ..|+|-+ ++.+.++++.+..+ +|+..+
T Consensus 248 ~Ai~~~~~L~~~---l~~iEeP~~~~~~~~~l~~~~~-iPIa~d 287 (441)
T 3vc5_A 248 TSIRVGRALDGV---LEYLEDPTPGIDGMARVAAEVP-MPLATN 287 (441)
T ss_dssp HHHHHHHHTTTT---CSEEECCSSSHHHHHHHHTTSS-SCEEES
T ss_pred HHHHHHHHHHHH---HHHhhccCCCHHHHHHHHhcCC-CCEEeC
Confidence 999999999875 5677654 57788999988876 677654
No 284
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=92.04 E-value=3.5 Score=40.59 Aligned_cols=196 Identities=16% Similarity=0.184 Sum_probs=109.6
Q ss_pred ceEecccCC-h-HHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHH
Q 012478 90 VHQGPACFD-A-LSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNV 167 (462)
Q Consensus 90 ~iv~p~ayD-a-lSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv 167 (462)
.++--|=|. . .....++.+|.+.+-++= -+.-.-+.+.-++-+++ + +..-+|. +.|-.+.+++
T Consensus 15 l~~Gtgky~~~~~~~~ai~asg~eivtva~-----rR~~~~~~~~~~~~~~i---~---~~~~lpn----taG~~taeeA 79 (268)
T 2htm_A 15 LILGSGKYEDFGVMREAIAAAKAEVVTVSV-----RRVELKAPGHVGLLEAL---E---GVRLLPN----TAGARTAEEA 79 (268)
T ss_dssp EEEECSSCSCHHHHHHHHHHTTCSEEEEEE-----EECC-------CHHHHT---T---TSEEEEB----CTTCCSHHHH
T ss_pred eEEecCCCCCHHHHHHHHHHhCCCEEEEEc-----cccCCCCCCcccHHHHH---h---hhhccCc----ccCCCCHHHH
Confidence 344445552 2 455677888999998771 11111011222333333 2 2222333 3344566666
Q ss_pred HHHHHHHHH-hCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEec-chhhcccHHHHHHH
Q 012478 168 KRTVKGYIK-AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVART-DSRQALSLEESLRR 245 (462)
Q Consensus 168 ~rtVk~l~~-AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiART-DA~~~~gldeAI~R 245 (462)
.++.+...+ .|-.=|+||--.. .+-+.| +..+.|+|+..-.+ .+|.++--+ |. +.-
T Consensus 80 v~~a~lare~~gt~~iKlEvi~d--------~~~l~p--D~~~tv~aa~~L~k---~Gf~Vlpy~~~D---------~~~ 137 (268)
T 2htm_A 80 VRLARLGRLLTGERWVKLEVIPD--------PTYLLP--DPLETLKAAERLIE---EDFLVLPYMGPD---------LVL 137 (268)
T ss_dssp HHHHHHHHHHHCCSEEBCCCCSC--------TTTTCC--CHHHHHHHHHHHHH---TTCEECCEECSC---------HHH
T ss_pred HHHHHhhhHhcCcceeeeeeccC--------ccccCc--CHHHHHHHHHHHHH---CCCEEeeccCCC---------HHH
Confidence 655544332 5778888886432 122332 23556666666555 367766433 32 235
Q ss_pred HHHhHhcCCcEEEecC--------CCCHHHHHHHHHhCCC-CceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHH-
Q 012478 246 SRAFADAGADVLFIDA--------LASKEEMKAFCEISPL-VPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG- 315 (462)
Q Consensus 246 akAy~eAGAD~Ifie~--------~~s~eei~~i~~~v~~-vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~- 315 (462)
|++++++|+++|+..+ +.+.+.++.+.+..+. +|+++ ++|=.+| -......+||+.-|..+.....
T Consensus 138 ak~l~~~G~~aVmPlg~pIGsG~Gi~~~~~L~~i~~~~~~~vPVI~---~GGI~tp-sDAa~AmeLGAdgVlVgSAI~~a 213 (268)
T 2htm_A 138 AKRLAALGTATVMPLAAPIGSGWGVRTRALLELFAREKASLPPVVV---DAGLGLP-SHAAEVMELGLDAVLVNTAIAEA 213 (268)
T ss_dssp HHHHHHHTCSCBEEBSSSTTTCCCSTTHHHHHHHHHTTTTSSCBEE---ESCCCSH-HHHHHHHHTTCCEEEESHHHHTS
T ss_pred HHHHHhcCCCEEEecCccCcCCcccCCHHHHHHHHHhcCCCCeEEE---eCCCCCH-HHHHHHHHcCCCEEEEChHHhCC
Confidence 7888889999998743 4577888888883344 67542 4432333 2457788999999999887664
Q ss_pred ----HHHHHHHHHHH
Q 012478 316 ----VSVRAMQDALT 326 (462)
Q Consensus 316 ----aa~~Am~~~l~ 326 (462)
...++|.++++
T Consensus 214 ~dP~~ma~af~~Av~ 228 (268)
T 2htm_A 214 QDPPAMAEAFRLAVE 228 (268)
T ss_dssp SSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 23455555433
No 285
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=92.03 E-value=1 Score=45.37 Aligned_cols=66 Identities=18% Similarity=0.202 Sum_probs=53.6
Q ss_pred HHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012478 106 EKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (462)
Q Consensus 106 e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaa 180 (462)
++.|+|.|-+++-+ ..|+...++.+|+...++.|.+.+++||++| |-||+..=.+.++...++|+.
T Consensus 91 ~~~GAdiIDIg~eS------trP~~~~vs~ee~~~~V~~v~~~~~vPlsID---g~~~~T~~~eV~eaAleagag 156 (323)
T 4djd_D 91 AEYGADLIYLKLDG------ADPEGANHSVDQCVATVKEVLQAVGVPLVVV---GCGDVEKDHEVLEAVAEAAAG 156 (323)
T ss_dssp HTTCCSEEEEECGG------GCTTTTCCCHHHHHHHHHHHHHHCCSCEEEE---CCSCHHHHHHHHHHHHHHTTT
T ss_pred HHcCCCEEEEcCcc------CCCCCCCCCHHHHHHHHHHHHhhCCceEEEE---CCCCCCCCHHHHHHHHHhcCC
Confidence 47799999998743 4688888999999999999999999999999 677875444556677777865
No 286
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=91.97 E-value=1.1 Score=46.59 Aligned_cols=125 Identities=18% Similarity=0.202 Sum_probs=70.1
Q ss_pred HHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhc-CCcEEEeCCCCCCCHHHHHHHHHHHHHhC
Q 012478 100 LSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV-SIPVIGDGDNGYGNAMNVKRTVKGYIKAG 178 (462)
Q Consensus 100 lSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~-~iPVIaD~DtGyG~~~nv~rtVk~l~~AG 178 (462)
-.+..+.++|++++.+... .|++ ...++.++.|.+.+ ++||++ |.+.. .+.++.++++|
T Consensus 240 ~~a~~l~~aGvd~v~i~~~------~G~~-------~~~~e~i~~i~~~~p~~pvi~----g~~~t---~e~a~~l~~~G 299 (494)
T 1vrd_A 240 ERVEKLVKAGVDVIVIDTA------HGHS-------RRVIETLEMIKADYPDLPVVA----GNVAT---PEGTEALIKAG 299 (494)
T ss_dssp HHHHHHHHTTCSEEEECCS------CCSS-------HHHHHHHHHHHHHCTTSCEEE----EEECS---HHHHHHHHHTT
T ss_pred HHHHHHHHhCCCEEEEEec------CCch-------HHHHHHHHHHHHHCCCceEEe----CCcCC---HHHHHHHHHcC
Confidence 3556677889999998641 3533 45667788888877 699988 32322 22337788999
Q ss_pred ccEEEeCCCCCCCCCCCCCCC----cccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCC
Q 012478 179 FAGIILEDQVSPKGCGHTRGR----KVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGA 254 (462)
Q Consensus 179 aaGI~IEDq~~PKrCGH~~gk----~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGA 254 (462)
+++|.+-.... +|.... .-.|.-+.+..+..++ .. .++-|+|=-.-.. -..+..+.++||
T Consensus 300 ~d~I~v~~~~G----~~~~~~~~~~~g~p~~~~l~~v~~~~---~~--~~ipvia~GGI~~-------~~di~kala~GA 363 (494)
T 1vrd_A 300 ADAVKVGVGPG----SICTTRVVAGVGVPQLTAVMECSEVA---RK--YDVPIIADGGIRY-------SGDIVKALAAGA 363 (494)
T ss_dssp CSEEEECSSCS----TTCHHHHHHCCCCCHHHHHHHHHHHH---HT--TTCCEEEESCCCS-------HHHHHHHHHTTC
T ss_pred CCEEEEcCCCC----ccccccccCCCCccHHHHHHHHHHHH---hh--cCCCEEEECCcCC-------HHHHHHHHHcCC
Confidence 99999932211 111000 0134444444444333 22 2455555211111 113444556899
Q ss_pred cEEEec
Q 012478 255 DVLFID 260 (462)
Q Consensus 255 D~Ifie 260 (462)
|++.+-
T Consensus 364 d~V~iG 369 (494)
T 1vrd_A 364 ESVMVG 369 (494)
T ss_dssp SEEEES
T ss_pred CEEEEC
Confidence 999973
No 287
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=91.94 E-value=2 Score=39.98 Aligned_cols=169 Identities=14% Similarity=0.114 Sum_probs=90.8
Q ss_pred HHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEE
Q 012478 103 KLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGI 182 (462)
Q Consensus 103 rl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI 182 (462)
+.++++|.+.+-+-- +--.-+|.. .+. .+.++.|.+.++.|+.++.=. -++ .+.++.+.++|++||
T Consensus 26 ~~~~~~Gad~i~l~i----~Dg~fv~~~-~~~----~~~~~~lr~~~~~~~~v~lmv--~d~---~~~i~~~~~agad~v 91 (228)
T 1h1y_A 26 DRMVRLGADWLHMDI----MDGHFVPNL-TIG----APVIQSLRKHTKAYLDCHLMV--TNP---SDYVEPLAKAGASGF 91 (228)
T ss_dssp HHHHHTTCSEEEEEE----EBSSSSSCB-CBC----HHHHHHHHTTCCSEEEEEEES--SCG---GGGHHHHHHHTCSEE
T ss_pred HHHHHcCCCEEEEEE----ecCCcCcch-hhC----HHHHHHHHhhcCCcEEEEEEe--cCH---HHHHHHHHHcCCCEE
Confidence 456677999875542 000012221 112 245566666555565555422 133 233677778999999
Q ss_pred EeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhc--CCcEEEec
Q 012478 183 ILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADA--GADVLFID 260 (462)
Q Consensus 183 ~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eA--GAD~Ifie 260 (462)
++=+...+ | +..+.++++ +.. ++.+.-.+.-. .. +++.++|.++ |+|.|++-
T Consensus 92 ~vH~~~~~----~-------~~~~~~~~i---~~~------g~~igv~~~p~--t~----~e~~~~~~~~~~~~d~vl~~ 145 (228)
T 1h1y_A 92 TFHIEVSR----D-------NWQELIQSI---KAK------GMRPGVSLRPG--TP----VEEVFPLVEAENPVELVLVM 145 (228)
T ss_dssp EEEGGGCT----T-------THHHHHHHH---HHT------TCEEEEEECTT--SC----GGGGHHHHHSSSCCSEEEEE
T ss_pred EECCCCcc----c-------HHHHHHHHH---HHc------CCCEEEEEeCC--CC----HHHHHHHHhcCCCCCEEEEE
Confidence 55433210 1 112233333 221 23333232111 11 2356777777 99999874
Q ss_pred CCC-----------CHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012478 261 ALA-----------SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316 (462)
Q Consensus 261 ~~~-----------s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~a 316 (462)
++. ..+.++++.+..+.+|.. + .||-++ -+..++.+.|++.++.+...+.+
T Consensus 146 sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~---v-~GGI~~-~ni~~~~~aGaD~vvvGsai~~~ 207 (228)
T 1h1y_A 146 TVEPGFGGQKFMPEMMEKVRALRKKYPSLDIE---V-DGGLGP-STIDVAASAGANCIVAGSSIFGA 207 (228)
T ss_dssp SSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEE---E-ESSCST-TTHHHHHHHTCCEEEESHHHHTS
T ss_pred eecCCCCcccCCHHHHHHHHHHHHhcCCCCEE---E-ECCcCH-HHHHHHHHcCCCEEEECHHHHCC
Confidence 321 245667776665334432 2 346555 47889999999999999888764
No 288
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=91.92 E-value=1.1 Score=42.46 Aligned_cols=173 Identities=13% Similarity=0.006 Sum_probs=94.4
Q ss_pred HHHHHhCCCceEecccCChHH----HHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEe
Q 012478 81 LRQILELPGVHQGPACFDALS----AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGD 156 (462)
Q Consensus 81 LR~ll~~~~~iv~p~ayDalS----Arl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD 156 (462)
+.+.+.+.+.+.+.-..|.-. ++.+-+.|++.+-+.- .+ ... .+..+.+++... .+++.
T Consensus 10 ~~~~l~~~~ii~vir~~~~~~~~~~~~al~~gGv~~iel~~----------k~---~~~---~~~i~~l~~~~~-~l~vg 72 (224)
T 1vhc_A 10 IIEKLRELKIVPVIALDNADDILPLADTLAKNGLSVAEITF----------RS---EAA---ADAIRLLRANRP-DFLIA 72 (224)
T ss_dssp HHHHHHHHCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEET----------TS---TTH---HHHHHHHHHHCT-TCEEE
T ss_pred HHHHHHHCCeEEEEeCCCHHHHHHHHHHHHHcCCCEEEEec----------cC---chH---HHHHHHHHHhCc-CcEEe
Confidence 334444344444333344433 3445566899887751 01 111 224455555543 24433
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhc
Q 012478 157 GDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA 236 (462)
Q Consensus 157 ~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~ 236 (462)
+++=+ . ...++..+++||++||.- |. . .+ -++++++ .|.++++=..|
T Consensus 73 aGtvl-~----~d~~~~A~~aGAd~v~~p-~~--------d-------~~---v~~~ar~----~g~~~i~Gv~t----- 119 (224)
T 1vhc_A 73 AGTVL-T----AEQVVLAKSSGADFVVTP-GL--------N-------PK---IVKLCQD----LNFPITPGVNN----- 119 (224)
T ss_dssp EESCC-S----HHHHHHHHHHTCSEEECS-SC--------C-------HH---HHHHHHH----TTCCEECEECS-----
T ss_pred eCcEe-e----HHHHHHHHHCCCCEEEEC-CC--------C-------HH---HHHHHHH----hCCCEEeccCC-----
Confidence 33311 2 256678889999999763 32 1 11 1223332 46666553222
Q ss_pred ccHHHHHHHHHHhHhcCCcEEEe-cCCC--CHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhc-CCCEEeccch
Q 012478 237 LSLEESLRRSRAFADAGADVLFI-DALA--SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEEL-GFKLVAYPLS 312 (462)
Q Consensus 237 ~gldeAI~RakAy~eAGAD~Ifi-e~~~--s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~l-Gv~~V~yp~~ 312 (462)
.+| +....++|||.|-+ ++-. ..+.++++.+.+|.+|. +..||-++ -+..++.+. |+..|. +..
T Consensus 120 --~~e----~~~A~~~Gad~vk~Fpa~~~gG~~~lk~l~~~~~~ipv----vaiGGI~~-~N~~~~l~agga~~v~-gS~ 187 (224)
T 1vhc_A 120 --PMA----IEIALEMGISAVKFFPAEASGGVKMIKALLGPYAQLQI----MPTGGIGL-HNIRDYLAIPNIVACG-GSW 187 (224)
T ss_dssp --HHH----HHHHHHTTCCEEEETTTTTTTHHHHHHHHHTTTTTCEE----EEBSSCCT-TTHHHHHTSTTBCCEE-ECG
T ss_pred --HHH----HHHHHHCCCCEEEEeeCccccCHHHHHHHHhhCCCCeE----EEECCcCH-HHHHHHHhcCCCEEEE-Ech
Confidence 233 44456899998855 3221 25778888887765554 34456655 488999998 888777 666
Q ss_pred HHH
Q 012478 313 LIG 315 (462)
Q Consensus 313 ll~ 315 (462)
++.
T Consensus 188 i~~ 190 (224)
T 1vhc_A 188 FVE 190 (224)
T ss_dssp GGC
T ss_pred hcC
Confidence 554
No 289
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=91.87 E-value=0.64 Score=48.86 Aligned_cols=88 Identities=15% Similarity=0.137 Sum_probs=53.4
Q ss_pred ceEecccCChHHHHHHHHhCCcEEEecc-HHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHH
Q 012478 90 VHQGPACFDALSAKLVEKSGFSFCFTSG-FSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVK 168 (462)
Q Consensus 90 ~iv~p~ayDalSArl~e~aGfdaI~vSG-~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~ 168 (462)
++++-++.+.-.|+.++++|+|+|.++. -+..+...-..+.+ .+.-+.+..+...++..++|||+|. |..++.++.
T Consensus 272 ~Vi~g~v~t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g-~p~~~~l~~v~~~~~~~~iPVIa~G--GI~~~~di~ 348 (490)
T 4avf_A 272 QVIGGNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVG-VPQISAIANVAAALEGTGVPLIADG--GIRFSGDLA 348 (490)
T ss_dssp EEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBC-CCHHHHHHHHHHHHTTTTCCEEEES--CCCSHHHHH
T ss_pred eEEEeeeCcHHHHHHHHHcCCCEEEECCCCCcCCCccccCCCC-ccHHHHHHHHHHHhccCCCcEEEeC--CCCCHHHHH
Confidence 5566669999999999999999999861 11000000011112 2222344444444455689999984 333555555
Q ss_pred HHHHHHHHhCccEEEe
Q 012478 169 RTVKGYIKAGFAGIIL 184 (462)
Q Consensus 169 rtVk~l~~AGaaGI~I 184 (462)
++.++||++|.+
T Consensus 349 ----kal~~GAd~V~v 360 (490)
T 4avf_A 349 ----KAMVAGAYCVMM 360 (490)
T ss_dssp ----HHHHHTCSEEEE
T ss_pred ----HHHHcCCCeeee
Confidence 344689999999
No 290
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=91.85 E-value=0.68 Score=44.65 Aligned_cols=92 Identities=22% Similarity=0.274 Sum_probs=55.6
Q ss_pred HHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeC
Q 012478 78 AKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDG 157 (462)
Q Consensus 78 a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~ 157 (462)
.+..++++..+-.+....+.+.--++.++++|.+.|...+ ++ .|.. .+..+ .+ ..+.|.+.+++||+++.
T Consensus 116 ~~~a~~~~~~g~~vi~~~~~~~~~a~~~~~~gad~v~~~~-~~----~Gt~-~~~~~-~~---~l~~i~~~~~iPviv~g 185 (264)
T 1xm3_A 116 LKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHAIMPGA-SP----IGSG-QGILN-PL---NLSFIIEQAKVPVIVDA 185 (264)
T ss_dssp HHHHHHHHHTTCCEEEEECSCHHHHHHHHHHTCSCBEECS-SS----TTCC-CCCSC-HH---HHHHHHHHCSSCBEEES
T ss_pred HHHHHHHHCCCeEEEEEcCCCHHHHHHHHHhCCCEEEECC-cc----cCCC-CCCCC-HH---HHHHHHhcCCCCEEEEe
Confidence 3445555554433333456677778888899999883312 11 1221 12223 22 44555566789999983
Q ss_pred CCCCCCHHHHHHHHHHHHHhCccEEEeC
Q 012478 158 DNGYGNAMNVKRTVKGYIKAGFAGIILE 185 (462)
Q Consensus 158 DtGyG~~~nv~rtVk~l~~AGaaGI~IE 185 (462)
|-.++.++. ++.++||+||.+=
T Consensus 186 --GI~t~eda~----~~~~~GAdgViVG 207 (264)
T 1xm3_A 186 --GIGSPKDAA----YAMELGADGVLLN 207 (264)
T ss_dssp --CCCSHHHHH----HHHHTTCSEEEES
T ss_pred --CCCCHHHHH----HHHHcCCCEEEEc
Confidence 555666654 6678999999983
No 291
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=91.85 E-value=1.4 Score=41.76 Aligned_cols=96 Identities=17% Similarity=0.210 Sum_probs=56.1
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCC-CCCCCCCCCCCcc-----------cCHHHHHHHHHHHHHHH
Q 012478 151 IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQV-SPKGCGHTRGRKV-----------VSREEAVMRIKAAVDAR 218 (462)
Q Consensus 151 iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~-~PKrCGH~~gk~L-----------vp~ee~~~kI~AA~~Ar 218 (462)
+|.+. .|+-+..+..+.++.++++||+.|+|-.-. .| .++|..+ +..++..+-++++++.
T Consensus 21 ~~~i~---~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp----~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~- 92 (262)
T 1rd5_A 21 IPYIT---AGDPDLATTAEALRLLDGCGADVIELGVPCSDP----YIDGPIIQASVARALASGTTMDAVLEMLREVTPE- 92 (262)
T ss_dssp EEEEE---TTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCC----TTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG-
T ss_pred EEEee---CCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCc----ccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-
Confidence 45444 566666788888999999999999993211 11 1222111 2344444555555433
Q ss_pred HhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCC
Q 012478 219 KESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALA 263 (462)
Q Consensus 219 ~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~ 263 (462)
.+..++++.+.+.....+++. +.++|||.+.++..+
T Consensus 93 --~~~Pv~~m~~~~~~~~~~~~~-------a~~aGadgv~v~d~~ 128 (262)
T 1rd5_A 93 --LSCPVVLLSYYKPIMFRSLAK-------MKEAGVHGLIVPDLP 128 (262)
T ss_dssp --CSSCEEEECCSHHHHSCCTHH-------HHHTTCCEEECTTCB
T ss_pred --CCCCEEEEecCcHHHHHHHHH-------HHHcCCCEEEEcCCC
Confidence 234566665554332334332 778999988887654
No 292
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=91.84 E-value=6.2 Score=42.14 Aligned_cols=140 Identities=17% Similarity=0.128 Sum_probs=80.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHH
Q 012478 127 LPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREE 206 (462)
Q Consensus 127 ~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee 206 (462)
.+|...-.+.++...++.+++..++|+|++- . +....+.|++|||+..... |..+
T Consensus 46 ~K~~~~~~~~~~a~~l~~l~~~~~v~liIND-----~-------~dlA~~~gAdGVHLgq~dl-------------~~~~ 100 (540)
T 3nl6_A 46 EKDADTKFFIEEALQIKELCHAHNVPLIIND-----R-------IDVAMAIGADGIHVGQDDM-------------PIPM 100 (540)
T ss_dssp CSSSCTTHHHHHHHHHHHHHHHTTCCEEECS-----C-------SHHHHHTTCSEEEECTTSS-------------CHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHhcCCEEEEeC-----c-------HHHHHHcCCCEEEEChhhc-------------CHHH
Confidence 3443334455666677778888899999962 1 1244568999999965421 2221
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcC---CcEEEecCC-C------------CHHHHHH
Q 012478 207 AVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAG---ADVLFIDAL-A------------SKEEMKA 270 (462)
Q Consensus 207 ~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAG---AD~Ifie~~-~------------s~eei~~ 270 (462)
+|+.++++.+ ++.+- +..+| ++...+.| ||.|.+-.+ + ..+.+++
T Consensus 101 ----------ar~~lg~~~i-iG~S~----ht~ee----a~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~~G~~~l~~ 161 (540)
T 3nl6_A 101 ----------IRKLVGPDMV-IGWSV----GFPEE----VDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIR 161 (540)
T ss_dssp ----------HHHHHCTTSE-EEEEE----CSHHH----HHHHHHTCC--CCEEEESCCSCCCCCC----CCCHHHHHHH
T ss_pred ----------HHHHhCCCCE-EEEEC----CCHHH----HHHHHHcCCCCCCEEEEcCCCCCCCCCCcCCCCCCHHHHHH
Confidence 1222355544 44432 23454 44456789 999998322 1 1455666
Q ss_pred HHHhC-----CCCceeeeeeecCCCCCCCCHHHHHh--------cCCCEEeccchHHH
Q 012478 271 FCEIS-----PLVPKMANMLEGGGKTPILNPLELEE--------LGFKLVAYPLSLIG 315 (462)
Q Consensus 271 i~~~v-----~~vP~~~N~l~~~g~tP~ls~~eL~~--------lGv~~V~yp~~ll~ 315 (462)
+.+.+ ..+|+. .-||-++ -+..++.+ .|+..|.....++.
T Consensus 162 i~~~~~~~~~~~iPvv----AIGGI~~-~ni~~v~~~~~~~g~~~GadgvAVvsaI~~ 214 (540)
T 3nl6_A 162 VLDALERNNAHWCRTV----GIGGLHP-DNIERVLYQCVSSNGKRSLDGICVVSDIIA 214 (540)
T ss_dssp HHHHHHHTTCTTCEEE----EESSCCT-TTHHHHHHHCBCTTSSCBCSCEEESHHHHT
T ss_pred HHHHHHhhccCCCCEE----EEcCCCH-HHHHHHHHhhcccccccCceEEEEeHHHhc
Confidence 66543 224432 2245554 36778876 78888887776663
No 293
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=91.81 E-value=1.1 Score=44.23 Aligned_cols=174 Identities=14% Similarity=0.111 Sum_probs=100.2
Q ss_pred HHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCC
Q 012478 80 SLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDN 159 (462)
Q Consensus 80 ~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~Dt 159 (462)
+||.=+|..+ ..++.--=.--++.+.++|++.|=++++... ...|-. -..+++ .+.+.+..+.++.+=.+
T Consensus 13 TlRDG~Q~~~-~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~---~~~p~~--~d~~~~---~~~~~~~~~~~~~~l~~- 82 (307)
T 1ydo_A 13 GPRDGLQNEP-VWIATEDKITWINQLSRTGLSYIEITSFVHP---KWIPAL--RDAIDV---AKGIDREKGVTYAALVP- 82 (307)
T ss_dssp HHHHTGGGSS-SCCCHHHHHHHHHHHHTTTCSEEEEEECSCT---TTCGGG--TTHHHH---HHHSCCCTTCEEEEECC-
T ss_pred CCCCCcCCCC-CCCCHHHHHHHHHHHHHcCCCEEEECCCcCc---cccccc--CCHHHH---HHHhhhcCCCeEEEEeC-
Confidence 4565555443 2222222223356778899999999864311 122211 122333 33443333455554443
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchh-----
Q 012478 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSR----- 234 (462)
Q Consensus 160 GyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~----- 234 (462)
+ .+.++...++|+..|+|-+..++- |...+-=.+.+|.+++++.+++..++.|......- ..+.
T Consensus 83 ---~----~~~i~~a~~~g~~~v~i~~~~sd~---~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i-~~~~~~~~~ 151 (307)
T 1ydo_A 83 ---N----QRGLENALEGGINEACVFMSASET---HNRKNINKSTSESLHILKQVNNDAQKANLTTRAYL-STVFGCPYE 151 (307)
T ss_dssp ---S----HHHHHHHHHHTCSEEEEEEESSHH---HHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEE-ECTTCBTTT
T ss_pred ---C----HHhHHHHHhCCcCEEEEEeecCHH---HHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEE-EEEecCCcC
Confidence 3 334667778999999998765421 11111113678888888888877776553322111 1111
Q ss_pred hcccHHHHHHHHHHhHhcCCcEEEec---CCCCHHHHHHHHHh
Q 012478 235 QALSLEESLRRSRAFADAGADVLFID---ALASKEEMKAFCEI 274 (462)
Q Consensus 235 ~~~gldeAI~RakAy~eAGAD~Ifie---~~~s~eei~~i~~~ 274 (462)
.....+..++-++++.++|||.|.+. |.-+++++.++.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~ 194 (307)
T 1ydo_A 152 KDVPIEQVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEA 194 (307)
T ss_dssp BCCCHHHHHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHH
Confidence 12467889999999999999999875 45567777766654
No 294
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=91.78 E-value=2.1 Score=42.79 Aligned_cols=143 Identities=15% Similarity=0.151 Sum_probs=81.7
Q ss_pred HHHHHHhCCcEEEec---cHHHHhhhccCCCCCCCCHHHHHHHHHHHHhh-cCCcEEEeCCCCCCCHHHHHHHHHHHHHh
Q 012478 102 AKLVEKSGFSFCFTS---GFSISAARLALPDTGFISYGEMVDQGQLITQA-VSIPVIGDGDNGYGNAMNVKRTVKGYIKA 177 (462)
Q Consensus 102 Arl~e~aGfdaI~vS---G~avSas~lG~PD~g~vsl~Eml~~~~~I~ra-~~iPVIaD~DtGyG~~~nv~rtVk~l~~A 177 (462)
++.+.++|++.|=++ ||..| -|+.+. +...-.+.++.+.+. .++|+.+=.--|++.. +.+++..++
T Consensus 36 ~~~L~~~Gvd~IEvG~~~g~p~s-----sp~~g~-~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~----~~i~~a~~a 105 (345)
T 1nvm_A 36 ARALDKAKVDSIEVAHGDGLQGS-----SFNYGF-GRHTDLEYIEAVAGEISHAQIATLLLPGIGSV----HDLKNAYQA 105 (345)
T ss_dssp HHHHHHHTCSEEECSCTTSTTCC-----BTTTBC-CSSCHHHHHHHHHTTCSSSEEEEEECBTTBCH----HHHHHHHHH
T ss_pred HHHHHHcCCCEEEEecCCCCCCC-----CCcccC-CCCCHHHHHHHHHhhCCCCEEEEEecCCcccH----HHHHHHHhC
Confidence 456677999999997 33332 122221 111122344555443 3577766422366664 456667789
Q ss_pred CccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEE
Q 012478 178 GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVL 257 (462)
Q Consensus 178 GaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~I 257 (462)
|+.+|+|=+.. .+ .+++.+-++++++. |.++.... .|+. ....+..++-+++..++||+.|
T Consensus 106 Gvd~v~I~~~~-----s~--------~~~~~~~i~~ak~~----G~~v~~~~-~~a~-~~~~e~~~~ia~~~~~~Ga~~i 166 (345)
T 1nvm_A 106 GARVVRVATHC-----TE--------ADVSKQHIEYARNL----GMDTVGFL-MMSH-MIPAEKLAEQGKLMESYGATCI 166 (345)
T ss_dssp TCCEEEEEEET-----TC--------GGGGHHHHHHHHHH----TCEEEEEE-ESTT-SSCHHHHHHHHHHHHHHTCSEE
T ss_pred CcCEEEEEEec-----cH--------HHHHHHHHHHHHHC----CCEEEEEE-EeCC-CCCHHHHHHHHHHHHHCCCCEE
Confidence 99999996432 11 13344444444433 43332222 3442 3456888899999999999999
Q ss_pred EecC---CCCHHHHHHHHH
Q 012478 258 FIDA---LASKEEMKAFCE 273 (462)
Q Consensus 258 fie~---~~s~eei~~i~~ 273 (462)
.+.. ..+++++.++.+
T Consensus 167 ~l~DT~G~~~P~~v~~lv~ 185 (345)
T 1nvm_A 167 YMADSGGAMSMNDIRDRMR 185 (345)
T ss_dssp EEECTTCCCCHHHHHHHHH
T ss_pred EECCCcCccCHHHHHHHHH
Confidence 8864 345566555543
No 295
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=91.77 E-value=3 Score=40.50 Aligned_cols=188 Identities=14% Similarity=0.093 Sum_probs=105.1
Q ss_pred CCceEecccCChHHH-HHHHHhCCc--EEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCC-
Q 012478 88 PGVHQGPACFDALSA-KLVEKSGFS--FCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGN- 163 (462)
Q Consensus 88 ~~~iv~p~ayDalSA-rl~e~aGfd--aI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~- 163 (462)
+..+++.-..|.-.| +++++.+-. ++=+ |+.+-. ..|.. .++.+.+ .+.+|++|.=.+ +
T Consensus 28 ~~LivALD~~~~~~al~l~~~l~~~v~~~Kv-G~~l~~-~~G~~------------~v~~Lk~-~g~~VflDlK~~--DI 90 (255)
T 3ldv_A 28 PKVIVALDYDNLADALAFVDKIDPSTCRLKV-GKEMFT-LFGPD------------FVRELHK-RGFSVFLDLKFH--DI 90 (255)
T ss_dssp CCEEEEECCSSHHHHHHHHTTSCGGGCEEEE-EHHHHH-HHHHH------------HHHHHHH-TTCCEEEEEEEC--SC
T ss_pred CCeEEEcCCCCHHHHHHHHHHhCCcCcEEEe-CHHHHH-hhCHH------------HHHHHHh-cCCCEEEEEecc--cc
Confidence 334566666666666 344555422 2222 333321 23421 2333333 379999998864 5
Q ss_pred HHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhC-CCeEEEE---ec--chhh--
Q 012478 164 AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESG-SDIVIVA---RT--DSRQ-- 235 (462)
Q Consensus 164 ~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g-~d~vIiA---RT--DA~~-- 235 (462)
+..+...++.+.++|++.+.+--. .| .+-|++++++..+.| ....+++ -| +...
T Consensus 91 pnTv~~a~~~~~~~gaD~vTVh~~---------~G---------~~~~~~a~~~~~~~g~~~~~li~VtvLTS~s~~~l~ 152 (255)
T 3ldv_A 91 PNTCSKAVKAAAELGVWMVNVHAS---------GG---------ERMMAASREILEPYGKERPLLIGVTVLTSMESADLQ 152 (255)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEGG---------GC---------HHHHHHHHHHHGGGGGGSCEEEEECSCTTCCHHHHH
T ss_pred hhHHHHHHHHHHhcCCCEEEEecc---------CC---------HHHHHHHHHHHhhcCCCCceEEEEEEEecCCHHHHH
Confidence 344666778888999999988332 11 224556666554321 1122222 22 2210
Q ss_pred ----cccH-HHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecC----CC----CCCCCHHHHHhc
Q 012478 236 ----ALSL-EESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGG----GK----TPILNPLELEEL 302 (462)
Q Consensus 236 ----~~gl-deAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~----g~----tP~ls~~eL~~l 302 (462)
...+ +.++++++...++|.|.++.. ..|++.+.+..+ +.++-+++|- +. .-..|+++..+.
T Consensus 153 ~~g~~~~~~~~V~~~A~~a~~aG~~GvV~s----a~e~~~iR~~~g--~~fl~VtPGIr~qg~~~~dQ~Rv~t~~~a~~a 226 (255)
T 3ldv_A 153 GIGILSAPQDHVLRLATLTKNAGLDGVVCS----AQEASLLKQHLG--REFKLVTPGIRPAGSEQGDQRRIMTPAQAIAS 226 (255)
T ss_dssp HTTCCSCHHHHHHHHHHHHHHTTCSEEECC----HHHHHHHHHHHC--TTSEEEEECCCCTTSTTSSCSSSCCHHHHHHT
T ss_pred hcCCCCCHHHHHHHHHHHHHHcCCCEEEEC----HHHHHHHHHhcC--CCcEEEeCCcccCcCCccceeccCCHHHHHHc
Confidence 1122 346778888889999999864 346666666544 2222233321 11 002478999999
Q ss_pred CCCEEeccchHHHH
Q 012478 303 GFKLVAYPLSLIGV 316 (462)
Q Consensus 303 Gv~~V~yp~~ll~a 316 (462)
|.+.++.|...+.+
T Consensus 227 Gad~iVvGr~I~~a 240 (255)
T 3ldv_A 227 GSDYLVIGRPITQA 240 (255)
T ss_dssp TCSEEEECHHHHTC
T ss_pred CCCEEEECHHHhCC
Confidence 99999999887765
No 296
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=91.75 E-value=2 Score=39.93 Aligned_cols=108 Identities=18% Similarity=0.098 Sum_probs=66.0
Q ss_pred HHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHH
Q 012478 169 RTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRA 248 (462)
Q Consensus 169 rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakA 248 (462)
..++..+++||++||.- +. +. + -+++++ ..|.++++-..| .+| +..
T Consensus 74 d~~~~A~~~GAd~v~~~-~~--------------d~-~---v~~~~~----~~g~~~i~G~~t-------~~e----~~~ 119 (207)
T 2yw3_A 74 KEAEAALEAGAAFLVSP-GL--------------LE-E---VAALAQ----ARGVPYLPGVLT-------PTE----VER 119 (207)
T ss_dssp HHHHHHHHHTCSEEEES-SC--------------CH-H---HHHHHH----HHTCCEEEEECS-------HHH----HHH
T ss_pred HHHHHHHHcCCCEEEcC-CC--------------CH-H---HHHHHH----HhCCCEEecCCC-------HHH----HHH
Confidence 56778889999999863 32 11 1 112222 235666554333 233 444
Q ss_pred hHhcCCcEEEecCCC---CHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012478 249 FADAGADVLFIDALA---SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 249 y~eAGAD~Ifie~~~---s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
..++|||.|-+..-. ..+.++.+.+.++.+|.+ ..||-++ -+..++.++|+..|..+..++.
T Consensus 120 A~~~Gad~v~~fpa~~~gG~~~lk~l~~~~~~ipvv----aiGGI~~-~n~~~~l~aGa~~vavgSai~~ 184 (207)
T 2yw3_A 120 ALALGLSALKFFPAEPFQGVRVLRAYAEVFPEVRFL----PTGGIKE-EHLPHYAALPNLLAVGGSWLLQ 184 (207)
T ss_dssp HHHTTCCEEEETTTTTTTHHHHHHHHHHHCTTCEEE----EBSSCCG-GGHHHHHTCSSBSCEEESGGGS
T ss_pred HHHCCCCEEEEecCccccCHHHHHHHHhhCCCCcEE----EeCCCCH-HHHHHHHhCCCcEEEEehhhhC
Confidence 557899988552211 246778888777655543 3456554 4788999999988888776554
No 297
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=91.75 E-value=1.8 Score=46.55 Aligned_cols=156 Identities=16% Similarity=0.077 Sum_probs=83.8
Q ss_pred HHHHHHHHhCCcEEEec---cHHHHhhh----ccCCCCCCCCHHH----HHHHHHHHHhhc--CCcEEE-----eCC-CC
Q 012478 100 LSAKLVEKSGFSFCFTS---GFSISAAR----LALPDTGFISYGE----MVDQGQLITQAV--SIPVIG-----DGD-NG 160 (462)
Q Consensus 100 lSArl~e~aGfdaI~vS---G~avSas~----lG~PD~g~vsl~E----ml~~~~~I~ra~--~iPVIa-----D~D-tG 160 (462)
-.|+.+.++|||+|=+- |+-+.-.. .-..|.---+++. +++.++.|++++ +.||.+ |.- .|
T Consensus 145 ~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g 224 (671)
T 1ps9_A 145 RCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDG 224 (671)
T ss_dssp HHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTC
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCC
Confidence 45788889999999875 33222100 0112321123443 455666677766 688876 542 24
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCCC----CCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhc
Q 012478 161 YGNAMNVKRTVKGYIKAGFAGIILEDQ----VSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA 236 (462)
Q Consensus 161 yG~~~nv~rtVk~l~~AGaaGI~IEDq----~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~ 236 (462)
+ +..+..+.++.++++|++.|++-.. ..|..... .+ +. ..-+++.+|+. + .+..++.+++-..
T Consensus 225 ~-~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~-~~-~~-~~~~~~~~i~~---~---~~iPvi~~Ggi~~--- 291 (671)
T 1ps9_A 225 G-TFAETVELAQAIEAAGATIINTGIGWHEARIPTIATP-VP-RG-AFSWVTRKLKG---H---VSLPLVTTNRIND--- 291 (671)
T ss_dssp C-CHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTT-SC-TT-TTHHHHHHHTT---S---CSSCEEECSSCCS---
T ss_pred C-CHHHHHHHHHHHHhcCCCEEEcCCCcccccccccccc-CC-cc-hHHHHHHHHHH---h---cCceEEEeCCCCC---
Confidence 3 4567788899999999999998321 11210000 00 00 11133444332 2 2234555555321
Q ss_pred ccHHHHHHHHHHhHhcC-CcEEEecC--CCCHHHHHHHHHh
Q 012478 237 LSLEESLRRSRAFADAG-ADVLFIDA--LASKEEMKAFCEI 274 (462)
Q Consensus 237 ~gldeAI~RakAy~eAG-AD~Ifie~--~~s~eei~~i~~~ 274 (462)
.+.+..+.+.| ||+|.+-- +.+++..+++.+.
T Consensus 292 ------~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k~~~g 326 (671)
T 1ps9_A 292 ------PQVADDILSRGDADMVSMARPFLADAELLSKAQSG 326 (671)
T ss_dssp ------HHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHTT
T ss_pred ------HHHHHHHHHcCCCCEEEeCHHHHhCcHHHHHHHcC
Confidence 22456666777 99998742 3455666666643
No 298
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=91.74 E-value=7.5 Score=36.81 Aligned_cols=146 Identities=13% Similarity=0.080 Sum_probs=83.2
Q ss_pred HHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhC
Q 012478 143 QLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESG 222 (462)
Q Consensus 143 ~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g 222 (462)
+.+.+. +.+|+.|.=.+ -.+..+.+.++.+.++||+.|.+--.. | .++ +++++++.++.|
T Consensus 59 ~~lr~~-~~~v~lD~kl~-Dip~t~~~~i~~~~~~Gad~vTvH~~~---------g------~~~---l~~~~~~~~~~G 118 (245)
T 1eix_A 59 RELQQR-GFDIFLDLKFH-DIPNTAAHAVAAAADLGVWMVNVHASG---------G------ARM---MTAAREALVPFG 118 (245)
T ss_dssp HHHHHT-TCCEEEEEEEC-SCHHHHHHHHHHHHHHTCSEEEEBGGG---------C------HHH---HHHHHHTTGGGG
T ss_pred HHHHHC-CCcEEEEeecc-ccHHHHHHHHHHHHhCCCCEEEEeccC---------C------HHH---HHHHHHHHHHcC
Confidence 444333 67899999887 446667778999999999999883321 1 122 334444433333
Q ss_pred C---CeE-EEEecch----hhc-----ccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCC
Q 012478 223 S---DIV-IVARTDS----RQA-----LSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGG 289 (462)
Q Consensus 223 ~---d~v-IiARTDA----~~~-----~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g 289 (462)
. +.+ |.-.|.. ... ...|..+..+....+.|.+.++..... ++++.+..+. .++-+. ||
T Consensus 119 ~~~~~~l~v~~~ts~~~~~l~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~~~e----i~~lr~~~~~--~~i~v~--gG 190 (245)
T 1eix_A 119 KDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQE----AVRFKQVFGQ--EFKLVT--PG 190 (245)
T ss_dssp GGCCEEEEECSCTTCCHHHHHTTTCCSCHHHHHHHHHHHHHHTTCSEEECCGGG----HHHHHHHHCS--SSEEEE--CC
T ss_pred CCCCcEEEEEecCCCCHHHHHHhccCCCHHHHHHHHHHHHHHcCCCeEEeCHHH----HHHHHHhcCC--CCEEEE--CC
Confidence 2 222 2222322 111 112445555555678999995544332 4444444331 222222 23
Q ss_pred CCCC----------CCHHHHHhcCCCEEeccchHHHH
Q 012478 290 KTPI----------LNPLELEELGFKLVAYPLSLIGV 316 (462)
Q Consensus 290 ~tP~----------ls~~eL~~lGv~~V~yp~~ll~a 316 (462)
-.+. .+++++.+.|...++.|...+.+
T Consensus 191 I~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a 227 (245)
T 1eix_A 191 IRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQS 227 (245)
T ss_dssp BCCTTCCCTTCCSCBCHHHHHHTTCSEEEECHHHHTS
T ss_pred cCCCCCCccchhccCCHHHHHHcCCCEEEECHHHcCC
Confidence 3332 27899999999999999888764
No 299
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=91.73 E-value=0.75 Score=45.65 Aligned_cols=77 Identities=16% Similarity=0.212 Sum_probs=51.2
Q ss_pred CCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHh
Q 012478 222 GSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE 301 (462)
Q Consensus 222 g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~ 301 (462)
.++..|..-+|. ++ .++...++|||.|.++.. +.++++++++.+.+ ... +...||-++ -+..++.+
T Consensus 196 ~~~~~IeVEv~t-----l~----ea~eAl~aGaD~I~LDn~-~~~~l~~av~~~~~-~v~--ieaSGGIt~-~~i~~~a~ 261 (287)
T 3tqv_A 196 DSNKVVEVEVTN-----LD----ELNQAIAAKADIVMLDNF-SGEDIDIAVSIARG-KVA--LEVSGNIDR-NSIVAIAK 261 (287)
T ss_dssp CTTSCEEEEESS-----HH----HHHHHHHTTCSEEEEESC-CHHHHHHHHHHHTT-TCE--EEEESSCCT-TTHHHHHT
T ss_pred CCCCcEEEEeCC-----HH----HHHHHHHcCCCEEEEcCC-CHHHHHHHHHhhcC-Cce--EEEECCCCH-HHHHHHHH
Confidence 355555554443 33 455556789999999886 45889988887642 111 122345444 48899999
Q ss_pred cCCCEEeccch
Q 012478 302 LGFKLVAYPLS 312 (462)
Q Consensus 302 lGv~~V~yp~~ 312 (462)
.|+..++.+..
T Consensus 262 tGVD~IsvGal 272 (287)
T 3tqv_A 262 TGVDFISVGAI 272 (287)
T ss_dssp TTCSEEECSHH
T ss_pred cCCCEEEEChh
Confidence 99999999753
No 300
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=91.67 E-value=5.2 Score=38.37 Aligned_cols=134 Identities=10% Similarity=0.042 Sum_probs=83.2
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecch
Q 012478 154 IGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDS 233 (462)
Q Consensus 154 IaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA 233 (462)
++..|.|..........++..++.||+.|-+==.. |. +.. ++.+-|++.+++....|..+.+|--|..
T Consensus 77 vigFP~G~~~~~~k~~e~~~Av~~GAdEID~vini-----g~-----~~~--~v~~ei~~v~~a~~~~g~~lKvIlEt~~ 144 (234)
T 1n7k_A 77 VIGFPLGQAPLEVKLVEAQTVLEAGATELDVVPHL-----SL-----GPE--AVYREVSGIVKLAKSYGAVVKVILEAPL 144 (234)
T ss_dssp EESTTTCCSCHHHHHHHHHHHHHHTCCEEEECCCG-----GG-----CHH--HHHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred EeCCCCCCCcHHHHHHHHHHHHHcCCCEEEEeccc-----hH-----HHH--HHHHHHHHHHHHHhhcCCeEEEEEeccC
Confidence 45778887666555566788889999999662211 21 112 7788888888887653444555655543
Q ss_pred hhcccHHHHHHHHHHhHhcCCcEEEec-CC-----CCHHHHHH--HHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCC
Q 012478 234 RQALSLEESLRRSRAFADAGADVLFID-AL-----ASKEEMKA--FCEISPLVPKMANMLEGGGKTPILNPLELEELGFK 305 (462)
Q Consensus 234 ~~~~gldeAI~RakAy~eAGAD~Ifie-~~-----~s~eei~~--i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~ 305 (462)
+ .-++...-++...++|||.|=.- +. .+.+.++- +.+.+. +|+. ..||-++ .-...++-++|..
T Consensus 145 L---~~e~i~~a~ria~eaGADfVKTsTG~~~~~gAt~~dv~l~~m~~~v~-v~VK---aaGGirt-~~~al~~i~aGa~ 216 (234)
T 1n7k_A 145 W---DDKTLSLLVDSSRRAGADIVKTSTGVYTKGGDPVTVFRLASLAKPLG-MGVK---ASGGIRS-GIDAVLAVGAGAD 216 (234)
T ss_dssp S---CHHHHHHHHHHHHHTTCSEEESCCSSSCCCCSHHHHHHHHHHHGGGT-CEEE---EESSCCS-HHHHHHHHHTTCS
T ss_pred C---CHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCHHHHHHHHHHHHHC-CCEE---EecCCCC-HHHHHHHHHcCcc
Confidence 3 23566666888889999999754 12 24566666 666655 4432 2332232 2234556688999
Q ss_pred EE
Q 012478 306 LV 307 (462)
Q Consensus 306 ~V 307 (462)
|+
T Consensus 217 Ri 218 (234)
T 1n7k_A 217 II 218 (234)
T ss_dssp EE
T ss_pred cc
Confidence 76
No 301
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=91.65 E-value=7.6 Score=38.42 Aligned_cols=145 Identities=17% Similarity=0.193 Sum_probs=86.8
Q ss_pred CCcEEEeCCCC--CC-CH--HHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCC
Q 012478 150 SIPVIGDGDNG--YG-NA--MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSD 224 (462)
Q Consensus 150 ~iPVIaD~DtG--yG-~~--~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d 224 (462)
++|+|+=++.+ +. ++ ..+...++..++.||++|.+--.. | . -+..++.+-+++++++..+.|..
T Consensus 105 ~~~lil~l~~~t~~~~~~~~~~l~~~ve~Av~~GAdaV~~~i~~-----G--s----~~~~~~l~~i~~v~~~a~~~Glp 173 (295)
T 3glc_A 105 NRPVVLRASGANSILAELSNEAVALSMDDAVRLNSCAVAAQVYI-----G--S----EYEHQSIKNIIQLVDAGMKVGMP 173 (295)
T ss_dssp CCCEEEECEECCCTTSCTTCCEECSCHHHHHHTTCSEEEEEECT-----T--S----TTHHHHHHHHHHHHHHHHTTTCC
T ss_pred CccEEEEEcCCCcCCCCCccchhHHHHHHHHHCCCCEEEEEEEC-----C--C----CcHHHHHHHHHHHHHHHHHcCCE
Confidence 57777766654 22 22 123345778889999999884332 1 1 12456777788888887765544
Q ss_pred eEEEEecchhhc---ccHHHHHH-HHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCC----CH
Q 012478 225 IVIVARTDSRQA---LSLEESLR-RSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPIL----NP 296 (462)
Q Consensus 225 ~vIiARTDA~~~---~gldeAI~-RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~l----s~ 296 (462)
+++. + .... .+ ++.+. -|+...++|||.|-..-. .+.++++++..+ +|++ ..||.+++.- ..
T Consensus 174 vIie--~-~~G~~~~~d-~e~i~~aariA~elGAD~VKt~~t--~e~~~~vv~~~~-vPVv---~~GG~~~~~~~~l~~v 243 (295)
T 3glc_A 174 TMAV--T-GVGKDMVRD-QRYFSLATRIAAEMGAQIIKTYYV--EKGFERIVAGCP-VPIV---IAGGKKLPEREALEMC 243 (295)
T ss_dssp EEEE--E-CC----CCS-HHHHHHHHHHHHHTTCSEEEEECC--TTTHHHHHHTCS-SCEE---EECCSCCCHHHHHHHH
T ss_pred EEEE--C-CCCCccCCC-HHHHHHHHHHHHHhCCCEEEeCCC--HHHHHHHHHhCC-CcEE---EEECCCCCHHHHHHHH
Confidence 4432 2 2210 12 34444 567788999999987743 256888887664 5643 3443332210 13
Q ss_pred HHHHhcCCCEEeccchHHH
Q 012478 297 LELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 297 ~eL~~lGv~~V~yp~~ll~ 315 (462)
.+.-+.|..-++++-.++.
T Consensus 244 ~~ai~aGA~Gv~vGRnI~q 262 (295)
T 3glc_A 244 WQAIDQGASGVDMGRNIFQ 262 (295)
T ss_dssp HHHHHTTCSEEEESHHHHT
T ss_pred HHHHHhCCeEEEeHHHHhc
Confidence 4555789999999988773
No 302
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=91.63 E-value=0.13 Score=49.85 Aligned_cols=172 Identities=16% Similarity=0.146 Sum_probs=95.9
Q ss_pred HHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012478 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (462)
Q Consensus 101 SArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaa 180 (462)
.|+..++.|++.+++--+. | ...+.+++|++.+.+||.++. |- . .. .++++. +||+
T Consensus 43 ~A~~~~~~Ga~~l~vvDL~------~----------~n~~~i~~i~~~~~~pv~vgG--Gi-r--~~--~~~~~l-~Ga~ 98 (260)
T 2agk_A 43 YAKLYKDRDVQGCHVIKLG------P----------NNDDAAREALQESPQFLQVGG--GI-N--DT--NCLEWL-KWAS 98 (260)
T ss_dssp HHHHHHHTTCTTCEEEEES------S----------SCHHHHHHHHHHSTTTSEEES--SC-C--TT--THHHHT-TTCS
T ss_pred HHHHHHHcCCCEEEEEeCC------C----------CCHHHHHHHHhcCCceEEEeC--CC-C--HH--HHHHHh-cCCC
Confidence 5688888999877762111 1 234557788888899999842 22 1 22 566777 9999
Q ss_pred EEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHH-HHHhhCCCeEEEEec--c-h-h-hcccHH-----HHH-HHHHH
Q 012478 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVD-ARKESGSDIVIVART--D-S-R-QALSLE-----ESL-RRSRA 248 (462)
Q Consensus 181 GI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~-Ar~~~g~d~vIiART--D-A-~-~~~gld-----eAI-~RakA 248 (462)
-|.+ +...-+.+|. ++++ .+.++....- .+.. .-|=+|+ + . . ...+.. +++ +-++.
T Consensus 99 ~Vii-gs~a~~~~g~------~~p~-~~~~~~~~~g~~~iv----v~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a~~ 166 (260)
T 2agk_A 99 KVIV-TSWLFTKEGH------FQLK-RLERLTELCGKDRIV----VDLSCRKTQDGRWIVAMNKWQTLTDLELNADTFRE 166 (260)
T ss_dssp CEEE-CGGGBCTTCC------BCHH-HHHHHHHHHCGGGEE----EEEEEEEEETTEEEEEETTTTEEEEEEESHHHHHH
T ss_pred EEEE-CcHHHhhcCC------CCHH-HHHHHHHHhCcCcEE----EEEEeeecCCCceEEEEcCCccccCccHHHHHHHH
Confidence 8887 3321222221 2343 3333322221 1100 1111221 1 0 0 001111 235 67888
Q ss_pred hHhcCCcEEEecCC--------CCHHHHHHHHHhCC---CCceeeeeeecCCCCCCCCHHHHHhc--CCCEEeccchH
Q 012478 249 FADAGADVLFIDAL--------ASKEEMKAFCEISP---LVPKMANMLEGGGKTPILNPLELEEL--GFKLVAYPLSL 313 (462)
Q Consensus 249 y~eAGAD~Ifie~~--------~s~eei~~i~~~v~---~vP~~~N~l~~~g~tP~ls~~eL~~l--Gv~~V~yp~~l 313 (462)
|+++ |+.|+++++ ++.+.++++.+.+| .+|+.+| ||-.-.=...++.++ |+.-|+.+..+
T Consensus 167 ~~~~-a~~il~t~i~~dG~~~G~d~eli~~l~~~~~~~~~iPVIas----GGi~s~ed~~~l~~~~~G~~gvivg~al 239 (260)
T 2agk_A 167 LRKY-TNEFLIHAADVEGLCGGIDELLVSKLFEWTKDYDDLKIVYA----GGAKSVDDLKLVDELSHGKVDLTFGSSL 239 (260)
T ss_dssp HTTT-CSEEEEEC-------CCCCHHHHHHHHHHHTTCSSCEEEEE----SCCCCTHHHHHHHHHHTTCEEEECCTTB
T ss_pred HHHh-cCEEEEEeeccccCcCCCCHHHHHHHHHhhcccCCceEEEe----CCCCCHHHHHHHHHhcCCCCEEEeeCCH
Confidence 8899 999998654 46789999999873 3676544 343212245666777 88888887754
No 303
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=91.59 E-value=3 Score=43.55 Aligned_cols=151 Identities=13% Similarity=0.177 Sum_probs=94.5
Q ss_pred CCcEEEeCCCCCCCHH-HHHHHHHHHH-HhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEE
Q 012478 150 SIPVIGDGDNGYGNAM-NVKRTVKGYI-KAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVI 227 (462)
Q Consensus 150 ~iPVIaD~DtGyG~~~-nv~rtVk~l~-~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vI 227 (462)
+.||++|+=.| +.. .+...++.+. +.|+++|.+--. .| .+-+++++++. +...+|
T Consensus 77 g~~VflDlK~~--DIpnT~~~~a~~~~~~lg~d~vTvh~~---------~G---------~~~l~~~~~~~---~~~v~v 133 (453)
T 3qw4_B 77 GIPVVLDAKRG--DIADTADAYATSAFKHLNAHAITASPY---------MG---------SDSLQPFMRYP---DKAVFV 133 (453)
T ss_dssp TSCBEEEEEEC--CCHHHHHHHHHHHHTTSCCSEEEECST---------TC---------HHHHHHHHTCT---TSEEEE
T ss_pred CCeEEEEeecC--ChHHHHHHHHHHHHHHcCCCEEEEccc---------CC---------HHHHHHHHHhh---CCcEEE
Confidence 68999999875 533 3455566655 489999999332 12 12445555543 346889
Q ss_pred EEecchhhc----------cc-HHHHHHHHH-HhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCC
Q 012478 228 VARTDSRQA----------LS-LEESLRRSR-AFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILN 295 (462)
Q Consensus 228 iARTDA~~~----------~g-ldeAI~Rak-Ay~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls 295 (462)
..+|+.... .. .+..+++++ .+.++|.|.+++.+ .+++|++.+.+..+..++ +++|-| ...-+
T Consensus 134 L~~tS~~~~~~lq~~~~~~~~~~~~V~~~a~~~~~~~g~~GvV~ga-t~~~e~~~ir~~~~~~~~---l~PGig-~qg~t 208 (453)
T 3qw4_B 134 LCKTSNKGSNDLQCLRVGDRYLYEAVAERAEGPWNVNGNVGLVVGA-TDPVALARVRARAPTLWF---LVPGIG-AQGGS 208 (453)
T ss_dssp EEECSSGGGGGTTTSEETTEEHHHHHHHHHTTTTCTTSCEEEEECT-TCHHHHHHHHHHCSSCCE---EECCSS-TTCCC
T ss_pred EEeCCCcchHHHHhcccCCCCHHHHHHHHHHHHHhhcCCeEEEECC-CCHHHHHHHHHhCCCCeE---EECCcC-CCCCC
Confidence 999987431 12 356777888 77889999999865 457889999887764332 333311 12347
Q ss_pred HHHHHhcCCCE------EeccchHH-----HHHHHHHHHHHHHH
Q 012478 296 PLELEELGFKL------VAYPLSLI-----GVSVRAMQDALTAI 328 (462)
Q Consensus 296 ~~eL~~lGv~~------V~yp~~ll-----~aa~~Am~~~l~~l 328 (462)
+++..+.|+.. ++.+-..+ ..+.+++.+.+.+.
T Consensus 209 p~~a~~~g~d~~~~~~livvgR~I~~A~dp~~aa~~i~~~i~~~ 252 (453)
T 3qw4_B 209 LKASLDAGLRADGSGMLINVSRGLARAADPRAAAKELCEEINAI 252 (453)
T ss_dssp HHHHHHHHCCTTSCCEEEEESHHHHSCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCcccCCceEecChhhccCCCHHHHHHHHHHHHHHH
Confidence 88988888765 55555444 33444444444433
No 304
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=91.59 E-value=0.72 Score=47.27 Aligned_cols=90 Identities=17% Similarity=0.158 Sum_probs=57.9
Q ss_pred HHHHHHhC-CCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhc--CCcEEEe
Q 012478 80 SLRQILEL-PGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV--SIPVIGD 156 (462)
Q Consensus 80 ~LR~ll~~-~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~--~iPVIaD 156 (462)
.++++.+. +.++++-++.+.-.|+.++++|+|+|.+++.+- ...|.+..+++ ++. .|.+++ ++|||+|
T Consensus 243 ~i~~lr~~~~~PvivKgv~~~e~A~~a~~aGad~I~vs~~gg-----r~~~~g~~~~~-~l~---~v~~av~~~ipVia~ 313 (392)
T 2nzl_A 243 DIKWLRRLTSLPIVAKGILRGDDAREAVKHGLNGILVSNHGA-----RQLDGVPATID-VLP---EIVEAVEGKVEVFLD 313 (392)
T ss_dssp HHHHHC--CCSCEEEEEECCHHHHHHHHHTTCCEEEECCGGG-----TSSTTCCCHHH-HHH---HHHHHHTTSSEEEEC
T ss_pred HHHHHHHhhCCCEEEEecCCHHHHHHHHHcCCCEEEeCCCCC-----CcCCCCcChHH-HHH---HHHHHcCCCCEEEEE
Confidence 34444432 457777788889999999999999999986541 12455544443 332 333333 5999998
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012478 157 GDNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 157 ~DtGyG~~~nv~rtVk~l~~AGaaGI~I 184 (462)
. |.-+..++. ++..+||++|.|
T Consensus 314 G--GI~~g~Dv~----kalalGAd~V~i 335 (392)
T 2nzl_A 314 G--GVRKGTDVL----KALALGAKAVFV 335 (392)
T ss_dssp S--SCCSHHHHH----HHHHTTCSEEEE
T ss_pred C--CCCCHHHHH----HHHHhCCCeeEE
Confidence 4 334555555 333489999998
No 305
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=91.59 E-value=3.9 Score=37.62 Aligned_cols=144 Identities=17% Similarity=0.109 Sum_probs=87.0
Q ss_pred HHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEE
Q 012478 103 KLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGI 182 (462)
Q Consensus 103 rl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI 182 (462)
..+-+.|+++|.+. .++ ++..++.+.++.+++..+++++++-+ ++...++|++||
T Consensus 20 ~~a~~~Gv~~v~lr----------~k~---~~~~~~~~~i~~l~~~~~~~livnd~------------~~~A~~~gadgv 74 (210)
T 3ceu_A 20 TALFEEGLDILHLR----------KPE---TPAMYSERLLTLIPEKYHRRIVTHEH------------FYLKEEFNLMGI 74 (210)
T ss_dssp HHHHHTTCCEEEEC----------CSS---CCHHHHHHHHHHSCGGGGGGEEESSC------------TTHHHHTTCSEE
T ss_pred HHHHHCCCCEEEEc----------cCC---CCHHHHHHHHHHHHHHhCCeEEEeCC------------HHHHHHcCCCEE
Confidence 33345677766544 222 56778888888888877899998621 145667899999
Q ss_pred EeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCC
Q 012478 183 ILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL 262 (462)
Q Consensus 183 ~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~ 262 (462)
|+ ++..++.|- + .+.++...+ ...+| +.... +|||.|++..+
T Consensus 75 hl-~~~~~~~~~----------------------~-----~~~~ig~s~-----~t~~e----~~~A~-~GaDyv~~g~v 116 (210)
T 3ceu_A 75 HL-NARNPSEPH----------------------D-----YAGHVSCSC-----HSVEE----VKNRK-HFYDYVFMSPI 116 (210)
T ss_dssp EC-CSSSCSCCT----------------------T-----CCSEEEEEE-----CSHHH----HHTTG-GGSSEEEECCC
T ss_pred EE-Ccccccccc----------------------c-----cCCEEEEec-----CCHHH----HHHHh-hCCCEEEECCc
Confidence 99 443221110 0 123333333 23344 23334 79999975332
Q ss_pred ------------CCHHHHHHHHHhC-CCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHH
Q 012478 263 ------------ASKEEMKAFCEIS-PLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLI 314 (462)
Q Consensus 263 ------------~s~eei~~i~~~v-~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll 314 (462)
...+.++++++.+ ..+|++ .-||-+| -...++.+.|+.-|-....++
T Consensus 117 f~t~sk~~~~~~~g~~~l~~~~~~~~~~iPvi----aiGGI~~-~nv~~~~~~Ga~gVav~s~i~ 176 (210)
T 3ceu_A 117 YDSISKVNYYSTYTAEELREAQKAKIIDSKVM----ALGGINE-DNLLEIKDFGFGGAVVLGDLW 176 (210)
T ss_dssp C---------CCCCHHHHHHHHHTTCSSTTEE----EESSCCT-TTHHHHHHTTCSEEEESHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEE----EECCCCH-HHHHHHHHhCCCEEEEhHHhH
Confidence 2456777777763 335653 2246565 378899999999888766544
No 306
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=91.52 E-value=4.6 Score=40.94 Aligned_cols=127 Identities=17% Similarity=0.144 Sum_probs=88.8
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccH
Q 012478 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (462)
Q Consensus 160 GyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gl 239 (462)
|.+++..+.+.++.+.+.|...+||-= |.. +.++-+++|++++++. ++. .=|.|+-.....
T Consensus 141 ~~~~~e~~~~~a~~~~~~G~~~iKlKv-------g~~------~~~~d~~~v~avR~~~----~~~--~L~vDaN~~w~~ 201 (389)
T 3s5s_A 141 TTGSPERAEEAARRAAAMGFRALKVKV-------GGR------LAASDPARIEAIHAAA----PGA--SLILDGNGGLTA 201 (389)
T ss_dssp CSSCSHHHHHHHHHHHHHTCCEEEEEC-------CGG------GTTTHHHHHHHHHHHC----TTC--EEEEECTTCSCH
T ss_pred cCCCHHHHHHHHHHHHHcCCCeEEEEe-------cCC------ChHHHHHHHHHHHHhC----CCC--eEEEECCCCCCH
Confidence 445677888888899889999999932 211 1234577888888774 353 346799888899
Q ss_pred HHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHH---hcC-CCEEeccch
Q 012478 240 EESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE---ELG-FKLVAYPLS 312 (462)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~---~lG-v~~V~yp~~ 312 (462)
++|++.++++.+++.+..|+|-+ .+.+.++++.+..+ +|+.+. .. ..+..++. +.| ++.+..=..
T Consensus 202 ~~A~~~~~~L~~~~~~i~~iEeP~~~~d~~~~~~l~~~~~-iPIa~d-----Es--~~~~~~~~~~i~~~a~d~v~~k~~ 273 (389)
T 3s5s_A 202 GEALALVAHARRLGADVALLEQPVPRDDWDGMKEVTRRAG-VDVAAD-----ES--AASAEDVLRVAAERAATVVNIKLM 273 (389)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSCTTCHHHHHHHHHHSS-SCEEES-----TT--CSSHHHHHHHHHTTCCSEEEECHH
T ss_pred HHHHHHHHHHhhCCCCeEEEECCCCcccHHHHHHHHhhCC-CCEEEC-----CC--CCCHHHHHHHHHcCCCCEEEecCC
Confidence 99999999997777789999875 36788999998875 676543 11 23555544 445 666655444
Q ss_pred H
Q 012478 313 L 313 (462)
Q Consensus 313 l 313 (462)
-
T Consensus 274 ~ 274 (389)
T 3s5s_A 274 K 274 (389)
T ss_dssp H
T ss_pred C
Confidence 4
No 307
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=91.51 E-value=3 Score=42.28 Aligned_cols=146 Identities=17% Similarity=0.155 Sum_probs=87.8
Q ss_pred HHHHHHHHhCCcEEEecc---HHHHhh----hccCCCC-CCCCHHH----HHHHHHHHHhhcC-CcEEEeCCC-----CC
Q 012478 100 LSAKLVEKSGFSFCFTSG---FSISAA----RLALPDT-GFISYGE----MVDQGQLITQAVS-IPVIGDGDN-----GY 161 (462)
Q Consensus 100 lSArl~e~aGfdaI~vSG---~avSas----~lG~PD~-g~vsl~E----ml~~~~~I~ra~~-iPVIaD~Dt-----Gy 161 (462)
-.|+.+.++|||+|=+-+ +-+.-. ..-.-|. |- +++. +++.++.|.++++ -||.+-+-- |+
T Consensus 165 ~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGG-slenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~ 243 (361)
T 3gka_A 165 RGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGG-SIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTM 243 (361)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSS-SHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSC
T ss_pred HHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCC-ChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCC
Confidence 467888999999998863 333211 0112232 21 4442 3445566666553 288875432 32
Q ss_pred --CCH-HHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhccc
Q 012478 162 --GNA-MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS 238 (462)
Q Consensus 162 --G~~-~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~g 238 (462)
+++ .+..+.++.++++|++.|++-... .+. +++.+|+.++ +..++.+++.+
T Consensus 244 ~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~--------~~~------~~~~~ik~~~------~iPvi~~Ggit------ 297 (361)
T 3gka_A 244 GDSDPAATFGHVARELGRRRIAFLFARESF--------GGD------AIGQQLKAAF------GGPFIVNENFT------ 297 (361)
T ss_dssp CCSCHHHHHHHHHHHHHHTTCSEEEEECCC--------STT------CCHHHHHHHH------CSCEEEESSCC------
T ss_pred CCCCcHHHHHHHHHHHHHcCCCEEEECCCC--------CCH------HHHHHHHHHc------CCCEEEeCCCC------
Confidence 233 467888999999999999985542 111 3455554443 24566666642
Q ss_pred HHHHHHHHHHhHhcC-CcEEEec--CCCCHHHHHHHHHhCC
Q 012478 239 LEESLRRSRAFADAG-ADVLFID--ALASKEEMKAFCEISP 276 (462)
Q Consensus 239 ldeAI~RakAy~eAG-AD~Ifie--~~~s~eei~~i~~~v~ 276 (462)
.+.+..+.+.| ||+|.+- .+.+++..+++.+..+
T Consensus 298 ----~e~a~~~l~~G~aD~V~iGR~~ladPdl~~k~~~g~~ 334 (361)
T 3gka_A 298 ----LDSAQAALDAGQADAVAWGKLFIANPDLPRRFKLNAP 334 (361)
T ss_dssp ----HHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCC
T ss_pred ----HHHHHHHHHcCCccEEEECHHhHhCcHHHHHHHhCCC
Confidence 23466666777 9999883 3456678888887654
No 308
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=91.49 E-value=3.1 Score=40.16 Aligned_cols=142 Identities=13% Similarity=0.069 Sum_probs=82.7
Q ss_pred cEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 012478 152 PVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVART 231 (462)
Q Consensus 152 PVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiART 231 (462)
-.+++.|.|......-...++..++.||+.|-+==...--+.| ..+.+.+-|++.+++... ..+.+|--|
T Consensus 82 ~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g--------~~~~v~~eI~~v~~a~~~--~~lKVIlEt 151 (239)
T 3ngj_A 82 CTVIGFPLGATPSEVKAYETKVAVEQGAEEVDMVINIGMVKAK--------KYDDVEKDVKAVVDASGK--ALTKVIIEC 151 (239)
T ss_dssp EEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTT--------CHHHHHHHHHHHHHHHTT--SEEEEECCG
T ss_pred EEEeccCCCCCchHHHHHHHHHHHHcCCCEEEEEeehHHhccc--------cHHHHHHHHHHHHHHhcC--CceEEEEec
Confidence 3467888887666544455677888899998652111000011 235678888888888752 235444444
Q ss_pred chhhcccHHHHHHHHHHhHhcCCcEEEec-C----CCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCE
Q 012478 232 DSRQALSLEESLRRSRAFADAGADVLFID-A----LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKL 306 (462)
Q Consensus 232 DA~~~~gldeAI~RakAy~eAGAD~Ifie-~----~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~ 306 (462)
..+ .-++...-++...+||||.|=.- | -.+.+.++-+.+.+.. ++ -+-..||-...-...++-++|..|
T Consensus 152 ~~L---t~eei~~a~~ia~~aGADfVKTSTGf~~ggAt~~dv~lmr~~vg~-~v--~VKasGGIrt~~da~~~i~aGA~r 225 (239)
T 3ngj_A 152 CYL---TNEEKVEVCKRCVAAGAEYVKTSTGFGTHGATPEDVKLMKDTVGD-KA--LVKAAGGIRTFDDAMKMINNGASR 225 (239)
T ss_dssp GGS---CHHHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHGG-GS--EEEEESSCCSHHHHHHHHHTTEEE
T ss_pred CCC---CHHHHHHHHHHHHHHCcCEEECCCCCCCCCCCHHHHHHHHHhhCC-Cc--eEEEeCCCCCHHHHHHHHHhcccc
Confidence 332 33555556788889999999654 2 2456666666665431 22 223333422123456677889987
Q ss_pred Eec
Q 012478 307 VAY 309 (462)
Q Consensus 307 V~y 309 (462)
+-.
T Consensus 226 iGt 228 (239)
T 3ngj_A 226 IGA 228 (239)
T ss_dssp EEE
T ss_pred eec
Confidence 743
No 309
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=91.48 E-value=3.2 Score=42.10 Aligned_cols=119 Identities=16% Similarity=0.148 Sum_probs=68.6
Q ss_pred HHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHH
Q 012478 167 VKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRS 246 (462)
Q Consensus 167 v~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~Ra 246 (462)
..+.++.++++|+++|.| +- +|. . | +...+.|+++++.. +++.|+.-+ ... .+.+
T Consensus 154 ~~~~a~~~~~~G~d~i~i-~~------~~g--~---~-~~~~e~i~~ir~~~----~~~pviv~~----v~~----~~~a 208 (404)
T 1eep_A 154 TIERVEELVKAHVDILVI-DS------AHG--H---S-TRIIELIKKIKTKY----PNLDLIAGN----IVT----KEAA 208 (404)
T ss_dssp HHHHHHHHHHTTCSEEEE-CC------SCC--S---S-HHHHHHHHHHHHHC----TTCEEEEEE----ECS----HHHH
T ss_pred HHHHHHHHHHCCCCEEEE-eC------CCC--C---h-HHHHHHHHHHHHHC----CCCeEEEcC----CCc----HHHH
Confidence 345567788899999998 32 231 1 2 44555666555442 244444311 112 3457
Q ss_pred HHhHhcCCcEEEe---------------cCCCCHHHHHHHHHhCC--CCceeeeeeecCCCCCCCCHHHHHhcCCCEEec
Q 012478 247 RAFADAGADVLFI---------------DALASKEEMKAFCEISP--LVPKMANMLEGGGKTPILNPLELEELGFKLVAY 309 (462)
Q Consensus 247 kAy~eAGAD~Ifi---------------e~~~s~eei~~i~~~v~--~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~y 309 (462)
+.+.++|||.|.+ .+.+..+.+..+.+..+ .+|++. .||-.-.-+..++-++|.+.|..
T Consensus 209 ~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia----~GGI~~~~d~~~ala~GAd~V~i 284 (404)
T 1eep_A 209 LDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTNICIIA----DGGIRFSGDVVKAIAAGADSVMI 284 (404)
T ss_dssp HHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEEE----ESCCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhhcCceEEE----ECCCCCHHHHHHHHHcCCCHHhh
Confidence 7788999999998 12334444555554322 255443 23432223456677789999999
Q ss_pred cchHH
Q 012478 310 PLSLI 314 (462)
Q Consensus 310 p~~ll 314 (462)
+..++
T Consensus 285 G~~~l 289 (404)
T 1eep_A 285 GNLFA 289 (404)
T ss_dssp CHHHH
T ss_pred CHHHh
Confidence 88774
No 310
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=91.43 E-value=0.48 Score=50.27 Aligned_cols=85 Identities=15% Similarity=0.005 Sum_probs=53.7
Q ss_pred CCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHh----hcCCcEEEeCCCCCCC
Q 012478 88 PGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQ----AVSIPVIGDGDNGYGN 163 (462)
Q Consensus 88 ~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~r----a~~iPVIaD~DtGyG~ 163 (462)
+.++++-++-+.-.|+.++++|+|+|.+|+.+- . .-|.+.-+++ ++..+..... ..++|||+|.. .-+
T Consensus 343 ~~PvivKgv~~~e~A~~a~~aGad~I~vs~hgG--~---~~d~~~~~~~-~l~~v~~~v~~~~~~~~ipVia~GG--I~~ 414 (511)
T 1kbi_A 343 KLPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGG--R---QLDFSRAPIE-VLAETMPILEQRNLKDKLEVFVDGG--VRR 414 (511)
T ss_dssp SSCEEEEEECSHHHHHHHHHTTCSEEEECCTTT--T---SSTTCCCHHH-HHHHHHHHHHTTTCBTTBEEEEESS--CCS
T ss_pred CCcEEEEeCCCHHHHHHHHHcCCCEEEEcCCCC--c---cCCCCCchHH-HHHHHHHHHHhhccCCCcEEEEECC--CCC
Confidence 557777777778889999999999999986431 1 1244433333 3333322222 12699999843 334
Q ss_pred HHHHHHHHHHHHHhCccEEEe
Q 012478 164 AMNVKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 164 ~~nv~rtVk~l~~AGaaGI~I 184 (462)
..++. |.+ .+||++|.|
T Consensus 415 g~Dv~---kaL-alGAdaV~i 431 (511)
T 1kbi_A 415 GTDVL---KAL-CLGAKGVGL 431 (511)
T ss_dssp HHHHH---HHH-HHTCSEEEE
T ss_pred HHHHH---HHH-HcCCCEEEE
Confidence 44555 333 489999998
No 311
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=91.42 E-value=1.2 Score=44.70 Aligned_cols=126 Identities=17% Similarity=0.237 Sum_probs=86.5
Q ss_pred CCCCHHHHHHHHHHHHHh-CccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhccc
Q 012478 160 GYGNAMNVKRTVKGYIKA-GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS 238 (462)
Q Consensus 160 GyG~~~nv~rtVk~l~~A-GaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~g 238 (462)
|++++..+.+.++.+.+. |...+||-= |.. +.++-+++|++++++. |+++.| +.|+.....
T Consensus 136 ~~~~~~~~~~~a~~~~~~~G~~~~K~K~-------g~~------~~~~d~~~v~avR~a~---g~~~~l--~vDan~~~~ 197 (367)
T 3dg3_A 136 GFDDPVKMVAEAERIRETYGINTFKVKV-------GRR------PVQLDTAVVRALRERF---GDAIEL--YVDGNRGWS 197 (367)
T ss_dssp ESSCHHHHHHHHHHHHHHHCCCEEEEEC-------CCS------STHHHHHHHHHHHHHH---GGGSEE--EEECTTCSC
T ss_pred cCCCHHHHHHHHHHHHHhcCccEEEEee-------CCC------hhhhHHHHHHHHHHHh---CCCCEE--EEECCCCCC
Confidence 567888888888888888 999999932 221 1124577888888775 456665 458877788
Q ss_pred HHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHH---hcC-CCEEeccc
Q 012478 239 LEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE---ELG-FKLVAYPL 311 (462)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~---~lG-v~~V~yp~ 311 (462)
+++|++-++++.+.|.+ |+|-+ .+.+.++++.+..+ +|+..+ +. ..+..++. +.| ++.|..-.
T Consensus 198 ~~~a~~~~~~l~~~~i~--~iEqP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~~~d~v~~k~ 267 (367)
T 3dg3_A 198 AAESLRAMREMADLDLL--FAEELCPADDVLSRRRLVGQLD-MPFIAD-----ES--VPTPADVTREVLGGSATAISIKT 267 (367)
T ss_dssp HHHHHHHHHHTTTSCCS--CEESCSCTTSHHHHHHHHHHCS-SCEEEC-----TT--CSSHHHHHHHHHHTSCSEEEECH
T ss_pred HHHHHHHHHHHHHhCCC--EEECCCCcccHHHHHHHHHhCC-CCEEec-----CC--cCCHHHHHHHHHcCCCCEEEeeh
Confidence 99999999999998865 45644 35678888888875 676533 21 23555544 445 67666644
Q ss_pred hH
Q 012478 312 SL 313 (462)
Q Consensus 312 ~l 313 (462)
.-
T Consensus 268 ~~ 269 (367)
T 3dg3_A 268 AR 269 (367)
T ss_dssp HH
T ss_pred hh
Confidence 33
No 312
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=91.40 E-value=1.9 Score=44.85 Aligned_cols=121 Identities=17% Similarity=0.231 Sum_probs=82.2
Q ss_pred CCHHHHHHHHHHHHH-hCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHH
Q 012478 162 GNAMNVKRTVKGYIK-AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (462)
Q Consensus 162 G~~~nv~rtVk~l~~-AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gld 240 (462)
.+++.+.+.++++.+ .|...+||-- |. .+.++-+++|+|++++. +++.| +.|+-....++
T Consensus 192 ~~~e~~~~~a~~~~~~~Gf~~~KlKv-------G~------~~~~~Di~~v~avRea~----~d~~L--~vDaN~~w~~~ 252 (445)
T 3vdg_A 192 LDPDGIVAQARRMIDEYGFSAIKLKG-------GV------FAPEEEMAAVEALRAAF----PDHPL--RLDPNAAWTPQ 252 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEEC-------SS------SCHHHHHHHHHHHHHHC----TTSCE--EEECTTCSCHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECC-------CC------CCHHHHHHHHHHHHHhC----CCCcE--EEECCCCCCHH
Confidence 357788888888876 5999999942 22 23566688999988875 34333 45888888899
Q ss_pred HHHHHHHHhHhcCCcEEEecCC-CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcC-CCEEec
Q 012478 241 ESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELG-FKLVAY 309 (462)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lG-v~~V~y 309 (462)
+|++-++++++. ..|+|-+ ++.+.++++.+..+ +|+..+-.. +-.....++-+.| +..+..
T Consensus 253 ~Ai~~~~~L~~~---l~~iEeP~~~~~~~~~l~~~~~-iPIa~dE~~----~~~~~~~~~l~~~a~div~~ 315 (445)
T 3vdg_A 253 TSVKVAAGLEGV---LEYLEDPTPGLDGMAEVAAQAP-MPLATNMCV----VAFDQLPAAVAKNSVQVVLS 315 (445)
T ss_dssp HHHHHHHHTTTT---CSEEECCSSSHHHHHHHHHHCS-SCEEESSSC----CSGGGHHHHHHHTCCSEEEE
T ss_pred HHHHHHHHHhhH---HHeeeCCCCCHHHHHHHHhcCC-CCEEcCCcC----CCHHHHHHHHHcCCCCEEee
Confidence 999999999875 5677654 57889999999876 677654221 1112344445555 555544
No 313
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=91.29 E-value=0.56 Score=49.62 Aligned_cols=85 Identities=18% Similarity=0.137 Sum_probs=54.7
Q ss_pred ceEecccCChHHHHHHHHhCCcEEEecc-HH---HHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHH
Q 012478 90 VHQGPACFDALSAKLVEKSGFSFCFTSG-FS---ISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAM 165 (462)
Q Consensus 90 ~iv~p~ayDalSArl~e~aGfdaI~vSG-~a---vSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~ 165 (462)
++++-++.+.-.|+.+.++|+|+|.++. .+ ......| .+ .+.-+.+..+...++..++|||+|. |..++.
T Consensus 299 ~vi~g~v~t~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g---~g-~p~~~~l~~v~~~~~~~~iPVIa~G--GI~~~~ 372 (511)
T 3usb_A 299 NIIAGNVATAEATKALIEAGANVVKVGIGPGSICTTRVVAG---VG-VPQLTAVYDCATEARKHGIPVIADG--GIKYSG 372 (511)
T ss_dssp EEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCHHHHHC---CC-CCHHHHHHHHHHHHHTTTCCEEEES--CCCSHH
T ss_pred eEEeeeeccHHHHHHHHHhCCCEEEECCCCccccccccccC---CC-CCcHHHHHHHHHHHHhCCCcEEEeC--CCCCHH
Confidence 5666688899999999999999999851 11 0000112 11 2223444455555666789999994 334555
Q ss_pred HHHHHHHHHHHhCccEEEe
Q 012478 166 NVKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 166 nv~rtVk~l~~AGaaGI~I 184 (462)
++.+ ..++||++|.+
T Consensus 373 di~k----ala~GA~~V~v 387 (511)
T 3usb_A 373 DMVK----ALAAGAHVVML 387 (511)
T ss_dssp HHHH----HHHTTCSEEEE
T ss_pred HHHH----HHHhCchhhee
Confidence 5553 34689999999
No 314
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=91.29 E-value=3.4 Score=40.63 Aligned_cols=170 Identities=15% Similarity=0.139 Sum_probs=94.0
Q ss_pred cccCCCccccccCchHH---HHHHHHh--CCCceEecccCCh------HHHHHHHHhCCcEEEeccHHHHhhhccCCCCC
Q 012478 63 VYRKNSTGVEACLSPAK---SLRQILE--LPGVHQGPACFDA------LSAKLVEKSGFSFCFTSGFSISAARLALPDTG 131 (462)
Q Consensus 63 ~y~rgs~~~~~a~~~a~---~LR~ll~--~~~~iv~p~ayDa------lSArl~e~aGfdaI~vSG~avSas~lG~PD~g 131 (462)
.+.-||...-+..+..+ -++...+ .++.-++.|+-.. --|+.++++|+|++++.. |-..
T Consensus 50 l~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~----------P~y~ 119 (306)
T 1o5k_A 50 LIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVT----------PYYN 119 (306)
T ss_dssp EEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC----------CCSS
T ss_pred EEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECC----------CCCC
Confidence 34456666554333322 2333332 3444444554432 235667788999998763 1112
Q ss_pred CCCHHHHHHHHHHHHhhcCCcEEE-eCC--CCCC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHH
Q 012478 132 FISYGEMVDQGQLITQAVSIPVIG-DGD--NGYG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEA 207 (462)
Q Consensus 132 ~vsl~Eml~~~~~I~ra~~iPVIa-D~D--tGyG-~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~ 207 (462)
..+-+++.+|.+.|++++++||+. +.| +|+. .+..+.+.+++ .-.+.|||-....
T Consensus 120 ~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--~pnIvgiKdssgd------------------- 178 (306)
T 1o5k_A 120 KPTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIAAD--LKNVVGIXEANPD------------------- 178 (306)
T ss_dssp CCCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHHHH--CTTEEEEEECCCC-------------------
T ss_pred CCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHHh--CCCEEEEeCCCCC-------------------
Confidence 237799999999999999999876 777 3543 34445544422 2578999864431
Q ss_pred HHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCC-CCHHHHHHHHHh
Q 012478 208 VMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEI 274 (462)
Q Consensus 208 ~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~ 274 (462)
..++...+......+++|.|..=.|.. ...+..+||+..+--.- --++++.++.+.
T Consensus 179 ~~~~~~~~~~~~~~~~~f~v~~G~d~~-----------~l~~l~~G~~G~is~~an~~P~~~~~l~~a 235 (306)
T 1o5k_A 179 IDQIDRTVSLTKQARSDFMVWSGNDDR-----------TFYLLCAGGDGVISVVSNVAPKQMVELCAE 235 (306)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEESSGGG-----------HHHHHHHTCCEEEESGGGTCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCcEEEEECcHHH-----------HHHHHHCCCCEEEecHHHhhHHHHHHHHHH
Confidence 123333332222112378776655543 22234579998865221 234566666654
No 315
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=91.19 E-value=6.8 Score=36.87 Aligned_cols=140 Identities=17% Similarity=0.219 Sum_probs=81.7
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhh---CCC--
Q 012478 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKES---GSD-- 224 (462)
Q Consensus 150 ~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~---g~d-- 224 (462)
+.+|+.|.=.+ -.+..+.+.++.+.++||+.|.+--.. | .+++ +++.+..++. |..
T Consensus 54 ~~~v~lD~kl~-Dip~t~~~~~~~~~~~Gad~vtvH~~~---------g------~~~l---~~~~~~~~~~~~~g~~~~ 114 (239)
T 1dbt_A 54 NCELFLDLKLH-DIPTTVNKAMKRLASLGVDLVNVHAAG---------G------KKMM---QAALEGLEEGTPAGKKRP 114 (239)
T ss_dssp TCEEEEEEEEC-SCHHHHHHHHHHHHTTTCSEEEEEGGG---------C------HHHH---HHHHHHHHHHSCTTSCCC
T ss_pred CCcEEEEeccc-cchHHHHHHHHHHHhcCCCEEEEeCcC---------C------HHHH---HHHHHHHHhhhccCCCCc
Confidence 67899999887 446667778999999999999873221 1 1222 2222222222 332
Q ss_pred --eEEEEecch----h-hc--c--c-HHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCC
Q 012478 225 --IVIVARTDS----R-QA--L--S-LEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTP 292 (462)
Q Consensus 225 --~vIiARTDA----~-~~--~--g-ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP 292 (462)
+.|...|.. . .. . . .|..+..++...+.|.+.++ .+. ++++++.+..+ +.++-+. ||-.+
T Consensus 115 ~~~~V~~~ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~v-~~~---~~i~~lr~~~~--~~~i~v~--gGI~~ 186 (239)
T 1dbt_A 115 SLIAVTQLTSTSEQIMKDELLIEKSLIDTVVHYSKQAEESGLDGVV-CSV---HEAKAIYQAVS--PSFLTVT--PGIRM 186 (239)
T ss_dssp EEEEECSCTTCCHHHHHHTSCBCSCHHHHHHHHHHHHHHTTCSEEE-CCG---GGHHHHTTTSC--TTCEEEE--CCBCC
T ss_pred cEEEEEEcCCCCHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCEEE-ECH---HHHHHHHHhcC--CCcEEEe--CCcCC
Confidence 444455432 1 11 1 2 34455555556789999954 443 35566555443 2222232 23333
Q ss_pred C----------CCHHHHHhcCCCEEeccchHHHH
Q 012478 293 I----------LNPLELEELGFKLVAYPLSLIGV 316 (462)
Q Consensus 293 ~----------ls~~eL~~lGv~~V~yp~~ll~a 316 (462)
. .+++++.+.|...++.|...+.+
T Consensus 187 ~~~~~~dq~rv~tp~~a~~aGad~iVvGr~I~~a 220 (239)
T 1dbt_A 187 SEDAANDQVRVATPAIAREKGSSAIVVGRSITKA 220 (239)
T ss_dssp TTSCCTTCSSCBCHHHHHHTTCSEEEECHHHHTS
T ss_pred CCCCccceeccCCHHHHHHcCCCEEEEChhhcCC
Confidence 2 24689999999999999887764
No 316
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=91.19 E-value=2.8 Score=42.17 Aligned_cols=126 Identities=15% Similarity=0.172 Sum_probs=85.3
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccH
Q 012478 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (462)
Q Consensus 160 GyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gl 239 (462)
|.+++....+.++.+.+.|...+||-= |. -+.++-+++|+|++++. |+++.+ +.|+......
T Consensus 143 ~~~~~~~~~~~a~~~~~~G~~~~K~Kv-------g~------~~~~~d~~~v~avR~~~---g~~~~l--~vDan~~~~~ 204 (377)
T 3my9_A 143 ADPDFDADLERMRAMVPAGHTVFKMKT-------GV------KPHAEELRILETMRGEF---GERIDL--RLDFNQALTP 204 (377)
T ss_dssp CCSSHHHHHHHHHHHTTTTCCEEEEEC-------SS------SCHHHHHHHHHHHHHHH---GGGSEE--EEECTTCCCT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEcc-------CC------CcHHHHHHHHHHHHHHh---CCCCeE--EEeCCCCcCH
Confidence 345777777778888888999999932 22 13566788999888775 456655 3477777788
Q ss_pred HHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHh---cC-CCEEeccch
Q 012478 240 EESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE---LG-FKLVAYPLS 312 (462)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~---lG-v~~V~yp~~ 312 (462)
++|++.++++.+.|.+. +|-+ .+.+.++++.+..+ +|+..+ .. ..+..++.+ .| ++.|..-..
T Consensus 205 ~~A~~~~~~l~~~~i~~--iEqP~~~~d~~~~~~l~~~~~-ipIa~d-----E~--~~~~~~~~~~i~~~~~d~v~~k~~ 274 (377)
T 3my9_A 205 FGAMKILRDVDAFRPTF--IEQPVPRRHLDAMAGFAAALD-TPILAD-----ES--CFDAVDLMEVVRRQAADAISVKIM 274 (377)
T ss_dssp TTHHHHHHHHHTTCCSC--EECCSCTTCHHHHHHHHHHCS-SCEEES-----TT--CSSHHHHHHHHHHTCCSEEECCHH
T ss_pred HHHHHHHHHHhhcCCCE--EECCCCccCHHHHHHHHHhCC-CCEEEC-----Cc--cCCHHHHHHHHHcCCCCEEEeccc
Confidence 99999999999988664 5543 35788899988875 676543 21 235555444 35 666665444
Q ss_pred H
Q 012478 313 L 313 (462)
Q Consensus 313 l 313 (462)
-
T Consensus 275 ~ 275 (377)
T 3my9_A 275 K 275 (377)
T ss_dssp H
T ss_pred c
Confidence 3
No 317
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=91.16 E-value=3.7 Score=44.76 Aligned_cols=139 Identities=17% Similarity=0.118 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHhCccEEEeCCCC-----------CCCCCCCCCCCcccCH-HHHHHHHHHHHHHHHhhCCCeEEEEecch
Q 012478 166 NVKRTVKGYIKAGFAGIILEDQV-----------SPKGCGHTRGRKVVSR-EEAVMRIKAAVDARKESGSDIVIVARTDS 233 (462)
Q Consensus 166 nv~rtVk~l~~AGaaGI~IEDq~-----------~PKrCGH~~gk~Lvp~-ee~~~kI~AA~~Ar~~~g~d~vIiARTDA 233 (462)
...+++++..+||++||.|-..- ..||...-+|- +-.. .-..+-|+|++++ .|+||.|..|--.
T Consensus 150 ~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs-~enR~r~~~eiv~avr~~---vg~~~pv~vrls~ 225 (729)
T 1o94_A 150 FYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGS-LENRARFWLETLEKVKHA---VGSDCAIATRFGV 225 (729)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSS-HHHHTHHHHHHHHHHHHH---HTTTSEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCC-HHHHhHHHHHHHHHHHHH---hCCCceEEEEEcc
Confidence 45566777888999999996542 12333322331 2111 2233344444444 3678888888643
Q ss_pred h-----hccc-HHHHHHHHHHhHhcCCcEEEecCC----------C--------CHHHHHHHHHhCCCCceeeeeeecCC
Q 012478 234 R-----QALS-LEESLRRSRAFADAGADVLFIDAL----------A--------SKEEMKAFCEISPLVPKMANMLEGGG 289 (462)
Q Consensus 234 ~-----~~~g-ldeAI~RakAy~eAGAD~Ifie~~----------~--------s~eei~~i~~~v~~vP~~~N~l~~~g 289 (462)
. .... .+++++-++++++ |+|++-+... + ..+.++++.+.+. +|++.| ++
T Consensus 226 ~~~~~~~G~~~~~~~~~~~~~l~~-~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~pvi~~----G~ 299 (729)
T 1o94_A 226 DTVYGPGQIEAEVDGQKFVEMADS-LVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSK-KPVLGV----GR 299 (729)
T ss_dssp ECSSCTTSCCTTTHHHHHHHHHGG-GCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCS-SCEECC----SC
T ss_pred ccCcCCCCCCchHHHHHHHHHHHh-hcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHCC-CEEEEe----CC
Confidence 1 1112 4578887877776 7998754321 1 2345666666664 676644 23
Q ss_pred C-CCCCCHHHHHhcC-CCEEeccchHHH
Q 012478 290 K-TPILNPLELEELG-FKLVAYPLSLIG 315 (462)
Q Consensus 290 ~-tP~ls~~eL~~lG-v~~V~yp~~ll~ 315 (462)
- +| -..+++-+-| +..|.++-.++.
T Consensus 300 i~~~-~~a~~~l~~g~aD~V~~gR~~l~ 326 (729)
T 1o94_A 300 YTDP-EKMIEIVTKGYADIIGCARPSIA 326 (729)
T ss_dssp CCCH-HHHHHHHHTTSCSBEEESHHHHH
T ss_pred CCCH-HHHHHHHHCCCCCEEEeCchhhc
Confidence 2 12 1234555556 899999876553
No 318
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=91.15 E-value=3.4 Score=41.65 Aligned_cols=152 Identities=11% Similarity=0.048 Sum_probs=85.2
Q ss_pred HHHHHHHHhCCcEEEecc---HHHHhhh----ccCCCCCCCCHHH----HHHHHHHHHhhcC-CcEEE-----eCCCCC-
Q 012478 100 LSAKLVEKSGFSFCFTSG---FSISAAR----LALPDTGFISYGE----MVDQGQLITQAVS-IPVIG-----DGDNGY- 161 (462)
Q Consensus 100 lSArl~e~aGfdaI~vSG---~avSas~----lG~PD~g~vsl~E----ml~~~~~I~ra~~-iPVIa-----D~DtGy- 161 (462)
-.|+.+.++|||+|=+-+ +-+.-.. .-.-|.---+++. +++.++.|+++++ -||.+ |.-.|.
T Consensus 165 ~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~ 244 (364)
T 1vyr_A 165 QAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVD 244 (364)
T ss_dssp HHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBC
T ss_pred HHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEcccccccccc
Confidence 356788899999999853 3221100 0012321123432 3445666666663 38888 421221
Q ss_pred --CC-HHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhccc
Q 012478 162 --GN-AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS 238 (462)
Q Consensus 162 --G~-~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~g 238 (462)
+. .....+.++.++++|++.|++-..... +. +-.+. +++.+|+.+ .+..++.+++-+
T Consensus 245 ~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~---~~----~~~~~-~~~~~v~~~------~~iPvi~~Ggit------ 304 (364)
T 1vyr_A 245 NGPNEEADALYLIEELAKRGIAYLHMSETDLA---GG----KPYSE-AFRQKVRER------FHGVIIGAGAYT------ 304 (364)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCSEEEEECCBTT---BC----CCCCH-HHHHHHHHH------CCSEEEEESSCC------
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEEEecCccc---CC----CcccH-HHHHHHHHH------CCCCEEEECCcC------
Confidence 22 356788899999999999999654321 00 11232 344444332 223445554431
Q ss_pred HHHHHHHHHHhHhcC-CcEEEec--CCCCHHHHHHHHHhC
Q 012478 239 LEESLRRSRAFADAG-ADVLFID--ALASKEEMKAFCEIS 275 (462)
Q Consensus 239 ldeAI~RakAy~eAG-AD~Ifie--~~~s~eei~~i~~~v 275 (462)
.+.+..+.+.| ||+|.+- .+.+++..+++.+..
T Consensus 305 ----~~~a~~~l~~g~aD~V~~gR~~l~~P~~~~~~~~g~ 340 (364)
T 1vyr_A 305 ----AEKAEDLIGKGLIDAVAFGRDYIANPDLVARLQKKA 340 (364)
T ss_dssp ----HHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTC
T ss_pred ----HHHHHHHHHCCCccEEEECHHHHhChhHHHHHHcCC
Confidence 33566777788 9999883 245566777777654
No 319
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=91.10 E-value=3 Score=42.25 Aligned_cols=147 Identities=16% Similarity=0.087 Sum_probs=87.4
Q ss_pred HHHHHHHHhCCcEEEecc---HHHHhh----hccCCCCCCCCHHH----HHHHHHHHHhhcC-CcEEEeCCC-----CC-
Q 012478 100 LSAKLVEKSGFSFCFTSG---FSISAA----RLALPDTGFISYGE----MVDQGQLITQAVS-IPVIGDGDN-----GY- 161 (462)
Q Consensus 100 lSArl~e~aGfdaI~vSG---~avSas----~lG~PD~g~vsl~E----ml~~~~~I~ra~~-iPVIaD~Dt-----Gy- 161 (462)
-.|+.+.++|||+|=+-+ +-+.-. ..-.-|.--=+++. +++.++.|.++++ -||.+-+-- |.
T Consensus 157 ~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~ 236 (362)
T 4ab4_A 157 SGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMG 236 (362)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCC
T ss_pred HHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccC
Confidence 467888899999998863 333211 01122321124442 3445556655553 288886542 22
Q ss_pred -CCH-HHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccH
Q 012478 162 -GNA-MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (462)
Q Consensus 162 -G~~-~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gl 239 (462)
+++ .+..+.++.++++|++.|++-... .+. +++.+|+.++ +..++.+++.+
T Consensus 237 ~~~~~~~~~~la~~l~~~Gvd~i~v~~~~--------~~~------~~~~~ik~~~------~iPvi~~Ggit------- 289 (362)
T 4ab4_A 237 DADRAETFTYVARELGKRGIAFICSRERE--------ADD------SIGPLIKEAF------GGPYIVNERFD------- 289 (362)
T ss_dssp CTTHHHHHHHHHHHHHHTTCSEEEEECCC--------CTT------CCHHHHHHHH------CSCEEEESSCC-------
T ss_pred CCCcHHHHHHHHHHHHHhCCCEEEECCCC--------CCH------HHHHHHHHHC------CCCEEEeCCCC-------
Confidence 233 467888999999999999985542 111 2455555443 23566666642
Q ss_pred HHHHHHHHHhHhcC-CcEEEec--CCCCHHHHHHHHHhCC
Q 012478 240 EESLRRSRAFADAG-ADVLFID--ALASKEEMKAFCEISP 276 (462)
Q Consensus 240 deAI~RakAy~eAG-AD~Ifie--~~~s~eei~~i~~~v~ 276 (462)
.+.+..+.+.| ||+|.+- .+.+++..+++.+..+
T Consensus 290 ---~e~a~~~l~~g~aD~V~iGR~~lanPdl~~k~~~g~~ 326 (362)
T 4ab4_A 290 ---KASANAALASGKADAVAFGVPFIANPDLPARLAADAP 326 (362)
T ss_dssp ---HHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHTTCC
T ss_pred ---HHHHHHHHHcCCccEEEECHHhHhCcHHHHHHHcCCC
Confidence 23466666777 9999883 3456678888877654
No 320
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=91.08 E-value=1.4 Score=43.38 Aligned_cols=94 Identities=17% Similarity=0.252 Sum_probs=60.7
Q ss_pred HHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeC
Q 012478 78 AKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDG 157 (462)
Q Consensus 78 a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~ 157 (462)
.+.++.+++. +..+++.+.+.-.|+.++++|.|++.+.|... -|+......+ -...++.+.+.+++||+++.
T Consensus 108 ~~~~~~l~~~-gi~vi~~v~t~~~a~~~~~~GaD~i~v~g~~~----GG~~G~~~~~---~~~~l~~v~~~~~iPviaaG 179 (328)
T 2gjl_A 108 GEHIAEFRRH-GVKVIHKCTAVRHALKAERLGVDAVSIDGFEC----AGHPGEDDIP---GLVLLPAAANRLRVPIIASG 179 (328)
T ss_dssp HHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEEECTTC----SBCCCSSCCC---HHHHHHHHHTTCCSCEEEES
T ss_pred HHHHHHHHHc-CCCEEeeCCCHHHHHHHHHcCCCEEEEECCCC----CcCCCCcccc---HHHHHHHHHHhcCCCEEEEC
Confidence 3444554444 45566788888899999999999999975431 1221111111 22455667777899999994
Q ss_pred CCCCCCHHHHHHHHHHHHHhCccEEEeC
Q 012478 158 DNGYGNAMNVKRTVKGYIKAGFAGIILE 185 (462)
Q Consensus 158 DtGyG~~~nv~rtVk~l~~AGaaGI~IE 185 (462)
|..+..++. ++.++||+||.+=
T Consensus 180 --GI~~~~~v~----~al~~GAdgV~vG 201 (328)
T 2gjl_A 180 --GFADGRGLV----AALALGADAINMG 201 (328)
T ss_dssp --SCCSHHHHH----HHHHHTCSEEEES
T ss_pred --CCCCHHHHH----HHHHcCCCEEEEC
Confidence 444665655 4445799999983
No 321
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=91.05 E-value=5.2 Score=38.36 Aligned_cols=170 Identities=15% Similarity=0.096 Sum_probs=98.4
Q ss_pred HhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCC
Q 012478 107 KSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILED 186 (462)
Q Consensus 107 ~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IED 186 (462)
+.||.++++...-+.... -+.+. .+.+-.+++.|.|......-..-++..++.||+-|-+==
T Consensus 40 ~~~~~aVcV~p~~v~~a~-~l~~~-----------------~v~v~tVigFP~G~~~~~~K~~E~~~Ai~~GAdEIDmVi 101 (231)
T 3ndo_A 40 DLGVFAVCVSPPLVSVAA-GVAPS-----------------GLAIAAVAGFPSGKHVPGIKATEAELAVAAGATEIDMVI 101 (231)
T ss_dssp HHTCSEEEECGGGHHHHH-HHCCT-----------------TCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HhCCcEEEECHHHHHHHH-HhcCC-----------------CCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCEEEEEe
Confidence 469999999853332111 11111 123446678998877664444456788889999885521
Q ss_pred CCCCCCCCCC-CCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhh-cccHHHHHHHHHHhHhcCCcEEEe-----
Q 012478 187 QVSPKGCGHT-RGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQ-ALSLEESLRRSRAFADAGADVLFI----- 259 (462)
Q Consensus 187 q~~PKrCGH~-~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~-~~gldeAI~RakAy~eAGAD~Ifi----- 259 (462)
.. |.. .| ..+.+.+-|++.+++.. +..+.+|--|..+. ...-++.+.-++...+||||.|=-
T Consensus 102 ni-----g~lk~g----~~~~v~~ei~~v~~a~~--~~~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGADfVKTSTGf~ 170 (231)
T 3ndo_A 102 DV-----GAALAG----DLDAVSADITAVRKAVR--AATLKVIVESAALLEFSGEPLLADVCRVARDAGADFVKTSTGFH 170 (231)
T ss_dssp CH-----HHHHTT----CHHHHHHHHHHHHHHTT--TSEEEEECCHHHHHHHTCHHHHHHHHHHHHHTTCSEEECCCSCC
T ss_pred eh-----Hhhhcc----cHHHHHHHHHHHHHHcc--CCceEEEEECcccCCCCCHHHHHHHHHHHHHHCcCEEEcCCCCC
Confidence 11 110 01 23667788888888874 33566665554331 113466666678888999999843
Q ss_pred -cCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEe
Q 012478 260 -DALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVA 308 (462)
Q Consensus 260 -e~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~ 308 (462)
.+-.+.+.++-+.+.+.. ++. +-..||-...-...++-++|..|+-
T Consensus 171 ~~~gAt~edv~lm~~~v~~-~v~--VKaaGGIrt~~~a~~~i~aGa~RiG 217 (231)
T 3ndo_A 171 PSGGASVQAVEIMARTVGE-RLG--VKASGGIRTAEQAAAMLDAGATRLG 217 (231)
T ss_dssp TTCSCCHHHHHHHHHHHTT-TSE--EEEESSCCSHHHHHHHHHTTCSEEE
T ss_pred CCCCCCHHHHHHHHHHhCC-Cce--EEEeCCCCCHHHHHHHHHhcchhcc
Confidence 233566777777766542 222 2222332111245667788999863
No 322
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=90.97 E-value=0.7 Score=48.70 Aligned_cols=89 Identities=18% Similarity=0.187 Sum_probs=54.0
Q ss_pred CceEecccCChHHHHHHHHhCCcEEEec-cHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHH
Q 012478 89 GVHQGPACFDALSAKLVEKSGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNV 167 (462)
Q Consensus 89 ~~iv~p~ayDalSArl~e~aGfdaI~vS-G~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv 167 (462)
-++++-++.+.-.|+.+.++|+|+|.++ |-+......-....+ .+.-+.+..+...++..++|||+|.. -.++.++
T Consensus 273 ~~Vi~g~v~t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g-~p~~~~i~~v~~~~~~~~iPVIa~GG--I~~~~di 349 (496)
T 4fxs_A 273 LEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVG-VPQITAIADAAGVANEYGIPVIADGG--IRFSGDI 349 (496)
T ss_dssp CCEEEEEECSHHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCC-CCHHHHHHHHHHHHGGGTCCEEEESC--CCSHHHH
T ss_pred ceEEEcccCcHHHHHHHHHhCCCEEEECCCCCcCcccccccCCC-ccHHHHHHHHHHHhccCCCeEEEeCC--CCCHHHH
Confidence 3566667899999999999999999987 211100000000011 23333444444445556899999843 3355555
Q ss_pred HHHHHHHHHhCccEEEe
Q 012478 168 KRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 168 ~rtVk~l~~AGaaGI~I 184 (462)
. ++.++||++|.+
T Consensus 350 ~----kala~GAd~V~i 362 (496)
T 4fxs_A 350 S----KAIAAGASCVMV 362 (496)
T ss_dssp H----HHHHTTCSEEEE
T ss_pred H----HHHHcCCCeEEe
Confidence 5 334689999999
No 323
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=90.97 E-value=1.4 Score=50.19 Aligned_cols=78 Identities=14% Similarity=0.139 Sum_probs=50.1
Q ss_pred HHHHHHHhCCcEEEec-cHHHHhhhccCCCCCC---CCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHH
Q 012478 101 SAKLVEKSGFSFCFTS-GFSISAARLALPDTGF---ISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIK 176 (462)
Q Consensus 101 SArl~e~aGfdaI~vS-G~avSas~lG~PD~g~---vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~ 176 (462)
.|+.++++|+|+|-+. |.-. . .+..+.|. -..+.+.+.++.|.+.+++||++-+-.+..+ +.+.++.+++
T Consensus 653 ~a~~~~~~g~d~iein~~~P~--~-~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~~~~~~---~~~~a~~~~~ 726 (1025)
T 1gte_A 653 LSRKAEASGADALELNLSCPH--G-MGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTPNVTD---IVSIARAAKE 726 (1025)
T ss_dssp HHHHHHHTTCSEEEEECCCBC--C-CC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEECSCSSC---HHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEECCCCC--C-CCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeCCChHH---HHHHHHHHHH
Confidence 3566777899999986 2111 0 11111111 2345566677788788899999977544333 5666788889
Q ss_pred hCccEEEe
Q 012478 177 AGFAGIIL 184 (462)
Q Consensus 177 AGaaGI~I 184 (462)
+|++||.+
T Consensus 727 ~G~d~i~v 734 (1025)
T 1gte_A 727 GGADGVTA 734 (1025)
T ss_dssp HTCSEEEE
T ss_pred cCCCEEEE
Confidence 99999999
No 324
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=90.96 E-value=4.9 Score=40.47 Aligned_cols=168 Identities=21% Similarity=0.255 Sum_probs=102.4
Q ss_pred EecccC----ChHHH--HHHHHhCCcEEEeccHHHHhhhccCCCC-CCCCHH---HHHHHHHHHHhhc-CCcEEEeC---
Q 012478 92 QGPACF----DALSA--KLVEKSGFSFCFTSGFSISAARLALPDT-GFISYG---EMVDQGQLITQAV-SIPVIGDG--- 157 (462)
Q Consensus 92 v~p~ay----DalSA--rl~e~aGfdaI~vSG~avSas~lG~PD~-g~vsl~---Eml~~~~~I~ra~-~iPVIaD~--- 157 (462)
.|||+| |-+-. .-+.+.|.+++.+=|.- . . .|. +.-.++ =+...++.|.+.. ++-||.|.
T Consensus 48 SMPGv~r~sid~l~~~~~~~~~lGi~~v~LFgvp--~--~--Kd~~gs~A~~~~g~v~rair~iK~~~pdl~vitDvcLc 121 (323)
T 1l6s_A 48 AMPGVMRIPEKHLAREIERIANAGIRSVMTFGIS--H--H--TDETGSDAWREDGLVARMSRICKQTVPEMIVMSDTCFC 121 (323)
T ss_dssp TSTTCEEEEGGGHHHHHHHHHHHTCCEEEEEEEC--S--S--CBSSCGGGGSTTSHHHHHHHHHHHHCTTSEEEEEECST
T ss_pred CCCCceeeCHHHHHHHHHHHHHCCCCEEEEeCCC--C--C--CCccccccCCCCCcHHHHHHHHHHHCCCeEEEEeeecc
Confidence 466665 33332 22335699998875531 0 0 121 222222 2455677777665 47788884
Q ss_pred ---CCCC------C---CHHHHHHH---HHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhC
Q 012478 158 ---DNGY------G---NAMNVKRT---VKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESG 222 (462)
Q Consensus 158 ---DtGy------G---~~~nv~rt---Vk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g 222 (462)
++|+ | |...+... .-.+.+|||+.|-=-|- ++| ||.|++++.++.|
T Consensus 122 ~YT~HGHcGil~~g~V~ND~Tl~~Lak~Als~A~AGAdiVAPSdM--------MDG-----------rV~aIR~aLd~~G 182 (323)
T 1l6s_A 122 EYTSHGHCGVLCEHGVDNDATLENLGKQAVVAAAAGADFIAPSAA--------MDG-----------QVQAIRQALDAAG 182 (323)
T ss_dssp TTBSSCCSSCBCSSSBCHHHHHHHHHHHHHHHHHHTCSEEEECSC--------CTT-----------HHHHHHHHHHHTT
T ss_pred ccCCCCceEeccCCcCccHHHHHHHHHHHHHHHHcCCCeEecccc--------ccc-----------HHHHHHHHHHhCC
Confidence 2232 2 23333333 44456899999877664 443 6666666666544
Q ss_pred -CCeEEEEecc------------hhhc-------------ccHHHHHHHHHHhHhcCCcEEEe-cCCCCHHHHHHHHHhC
Q 012478 223 -SDIVIVARTD------------SRQA-------------LSLEESLRRSRAFADAGADVLFI-DALASKEEMKAFCEIS 275 (462)
Q Consensus 223 -~d~vIiARTD------------A~~~-------------~gldeAI~RakAy~eAGAD~Ifi-e~~~s~eei~~i~~~v 275 (462)
.+.-|.+-+- |... ..-+||++.+..=.+-|||+|+| |+++-.+.++++.+.+
T Consensus 183 ~~~v~ImsYsaKyASafYGPFRdAa~Sap~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKPal~YLDIi~~vk~~~ 262 (323)
T 1l6s_A 183 FKDTAIMSYSTKFASSFYGPFREAAGSALKGDRKSYQMNPMNRREAIRESLLDEAQGADCLMVKPAGAYLDIVRELRERT 262 (323)
T ss_dssp CTTCEEBCCCEEBCCSCCHHHHHHHTCCCSSCCTTTSBCTTCHHHHHHHHHHHHHTTCSBEEEESCTTCHHHHHHHHTTC
T ss_pred CCCceeeehhHHHhHHhhHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCceEEEecCcchhHHHHHHHHhc
Confidence 3566665542 2111 13689999999999999999999 8999999999999887
Q ss_pred CCCceeeeee
Q 012478 276 PLVPKMANML 285 (462)
Q Consensus 276 ~~vP~~~N~l 285 (462)
. +|+.+=.+
T Consensus 263 ~-~P~aaYqV 271 (323)
T 1l6s_A 263 E-LPIGAYQV 271 (323)
T ss_dssp S-SCEEEEEC
T ss_pred C-CCeEEEEc
Confidence 4 77754333
No 325
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=90.95 E-value=0.97 Score=45.32 Aligned_cols=97 Identities=18% Similarity=0.225 Sum_probs=62.3
Q ss_pred HHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccC--CCCCC----CCHHHHHHHHHHHHhhcCC
Q 012478 78 AKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLAL--PDTGF----ISYGEMVDQGQLITQAVSI 151 (462)
Q Consensus 78 a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~--PD~g~----vsl~Eml~~~~~I~ra~~i 151 (462)
.+.++++++. +..++..+.+.-.|+.++++|+|+|.+.|.... ...|. ++... .+ .+..++.|.+.+++
T Consensus 135 ~~~i~~~~~~-g~~v~~~v~t~~~a~~a~~~GaD~i~v~g~~~G-Gh~g~~~~~~~~~~~~~~---~~~~l~~i~~~~~i 209 (369)
T 3bw2_A 135 REVIARLRRA-GTLTLVTATTPEEARAVEAAGADAVIAQGVEAG-GHQGTHRDSSEDDGAGIG---LLSLLAQVREAVDI 209 (369)
T ss_dssp HHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEEECTTCS-EECCCSSCCGGGTTCCCC---HHHHHHHHHHHCSS
T ss_pred HHHHHHHHHC-CCeEEEECCCHHHHHHHHHcCCCEEEEeCCCcC-CcCCCccccccccccccc---HHHHHHHHHHhcCc
Confidence 3455555554 456777889999999999999999999653210 01121 11100 22 23445666667799
Q ss_pred cEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeC
Q 012478 152 PVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILE 185 (462)
Q Consensus 152 PVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IE 185 (462)
|||++. |..++.++. .+.++||+||.+=
T Consensus 210 PViaaG--GI~~~~~~~----~~l~~GAd~V~vG 237 (369)
T 3bw2_A 210 PVVAAG--GIMRGGQIA----AVLAAGADAAQLG 237 (369)
T ss_dssp CEEEES--SCCSHHHHH----HHHHTTCSEEEES
T ss_pred eEEEEC--CCCCHHHHH----HHHHcCCCEEEEC
Confidence 999984 445665555 4556899999983
No 326
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=90.92 E-value=1.3 Score=43.73 Aligned_cols=133 Identities=13% Similarity=0.057 Sum_probs=83.1
Q ss_pred hHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHH---hhcCCcEEEeCC-CC--CC---CH-HHHH
Q 012478 99 ALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLIT---QAVSIPVIGDGD-NG--YG---NA-MNVK 168 (462)
Q Consensus 99 alSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~---ra~~iPVIaD~D-tG--yG---~~-~nv~ 168 (462)
..++..+-++|++++-+..+ +| +|. +-.+++..++++. +..++|+++++- .| .+ ++ ..+.
T Consensus 111 ~~~ve~a~~~GAdaV~vlv~------~~-~d~---~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~ 180 (304)
T 1to3_A 111 KINAQAVKRDGAKALKLLVL------WR-SDE---DAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAII 180 (304)
T ss_dssp SCCHHHHHHTTCCEEEEEEE------EC-TTS---CHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHH
T ss_pred chhHHHHHHcCCCEEEEEEE------cC-CCc---cHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHH
Confidence 36778888899998876542 34 342 2266666666654 456899999973 23 22 34 6788
Q ss_pred HHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHH
Q 012478 169 RTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRA 248 (462)
Q Consensus 169 rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakA 248 (462)
+.++.+.+.||+=++++-..++ .+ +.+++.+.+++.... .+.++++++=-. ..++.++..+.
T Consensus 181 ~aa~~a~~lGaD~iKv~~~~~~-----~g-----~~~~~~~vv~~~~~~---~~~P~Vv~aGG~-----~~~~~~~~~~~ 242 (304)
T 1to3_A 181 DAAKELGDSGADLYKVEMPLYG-----KG-----ARSDLLTASQRLNGH---INMPWVILSSGV-----DEKLFPRAVRV 242 (304)
T ss_dssp HHHHHHTTSSCSEEEECCGGGG-----CS-----CHHHHHHHHHHHHHT---CCSCEEECCTTS-----CTTTHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCCCcCC-----CC-----CHHHHHHHHHhcccc---CCCCeEEEecCC-----CHHHHHHHHHH
Confidence 8899999999999998764321 11 445554444432211 134545554432 22455667777
Q ss_pred hHhcCCcEEEe
Q 012478 249 FADAGADVLFI 259 (462)
Q Consensus 249 y~eAGAD~Ifi 259 (462)
..++||+.+.+
T Consensus 243 a~~aGa~Gv~v 253 (304)
T 1to3_A 243 AMEAGASGFLA 253 (304)
T ss_dssp HHHTTCCEEEE
T ss_pred HHHcCCeEEEE
Confidence 78899999886
No 327
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=90.88 E-value=0.77 Score=44.94 Aligned_cols=127 Identities=13% Similarity=0.066 Sum_probs=79.4
Q ss_pred HHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecch----hhcccHHHHHHHH
Q 012478 171 VKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDS----RQALSLEESLRRS 246 (462)
Q Consensus 171 Vk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA----~~~~gldeAI~Ra 246 (462)
+...++.||+=|-|=+.. ..+| +.|.-.. |+.+++.. +.+..++-|--. +....++...+..
T Consensus 14 a~~A~~~GAdRIELc~~L------~~GG--lTPS~g~---i~~~~~~~---~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di 79 (256)
T 1twd_A 14 ALTAQQNGADRVELCAAP------KEGG--LTPSLGV---LKSVRQRV---TIPVHPIIRPRGGDFCYSDGEFAAILEDV 79 (256)
T ss_dssp HHHHHHTTCSEEEECBCG------GGTC--BCCCHHH---HHHHHHHC---CSCEEEBCCSSSSCSCCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcCCc------ccCC--CCCCHHH---HHHHHHHc---CCceEEEECCCCCCCcCCHHHHHHHHHHH
Confidence 345667999998884432 1122 5555333 33344332 356777777422 1234578889999
Q ss_pred HHhHhcCCcEEEecCCC-----CHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccc
Q 012478 247 RAFADAGADVLFIDALA-----SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPL 311 (462)
Q Consensus 247 kAy~eAGAD~Ifie~~~-----s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~ 311 (462)
+.+.++|||.+++-++. +.+.++++.+...+.|..+.+--.--.-|.-..++|.++||++|+-..
T Consensus 80 ~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~~~~vTFHRAfD~~~d~~~ale~L~~lG~~rILTSG 149 (256)
T 1twd_A 80 RTVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSG 149 (256)
T ss_dssp HHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHTTSEEEECGGGGGCSCHHHHHHHHHHHTCCEEEECT
T ss_pred HHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCC
Confidence 99999999999987763 678888888765544443332110011122347889999999999743
No 328
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=90.86 E-value=5.6 Score=36.69 Aligned_cols=143 Identities=13% Similarity=0.135 Sum_probs=79.3
Q ss_pred HHHHHHHhh-cCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHH
Q 012478 140 DQGQLITQA-VSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDAR 218 (462)
Q Consensus 140 ~~~~~I~ra-~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar 218 (462)
..++.|.+. .+.||+.|.=.- ..+.. .++.+.++||++|.+-+.. .+++++++ +++.
T Consensus 48 ~~i~~lr~~~~~~~i~ld~~l~-d~p~~---~~~~~~~aGad~i~vh~~~---------------~~~~~~~~---~~~~ 105 (218)
T 3jr2_A 48 KAVSTLRHNHPNHILVCDMKTT-DGGAI---LSRMAFEAGADWITVSAAA---------------HIATIAAC---KKVA 105 (218)
T ss_dssp HHHHHHHHHCTTSEEEEEEEEC-SCHHH---HHHHHHHHTCSEEEEETTS---------------CHHHHHHH---HHHH
T ss_pred HHHHHHHHhCCCCcEEEEEeec-ccHHH---HHHHHHhcCCCEEEEecCC---------------CHHHHHHH---HHHH
Confidence 456667666 468999986443 23322 4588889999999885542 12333222 2222
Q ss_pred HhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEe-cCC--------CCHHHHHHHHHhC-CCCceeeeeeecC
Q 012478 219 KESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFI-DAL--------ASKEEMKAFCEIS-PLVPKMANMLEGG 288 (462)
Q Consensus 219 ~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifi-e~~--------~s~eei~~i~~~v-~~vP~~~N~l~~~ 288 (462)
++.|....+ |...... .++++.+.+.|+|.+.+ .+. -..++++++.+.. +.+|+. + .|
T Consensus 106 ~~~g~~~~~----d~l~~~T----~~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~~l~~i~~~~~~~~pi~---v-~G 173 (218)
T 3jr2_A 106 DELNGEIQI----EIYGNWT----MQDAKAWVDLGITQAIYHRSRDAELAGIGWTTDDLDKMRQLSALGIELS---I-TG 173 (218)
T ss_dssp HHHTCEEEE----ECCSSCC----HHHHHHHHHTTCCEEEEECCHHHHHHTCCSCHHHHHHHHHHHHTTCEEE---E-ES
T ss_pred HHhCCccce----eeeecCC----HHHHHHHHHcCccceeeeeccccccCCCcCCHHHHHHHHHHhCCCCCEE---E-EC
Confidence 222333321 1111111 13566667779997654 321 1445556555432 123332 2 23
Q ss_pred CCCCCCCHHHHHhcCCCEEeccchHHHHH
Q 012478 289 GKTPILNPLELEELGFKLVAYPLSLIGVS 317 (462)
Q Consensus 289 g~tP~ls~~eL~~lGv~~V~yp~~ll~aa 317 (462)
|-+| -+..++.+.|...++.+..++.+.
T Consensus 174 GI~~-~~~~~~~~aGAd~vvvGsaI~~a~ 201 (218)
T 3jr2_A 174 GIVP-EDIYLFEGIKTKTFIAGRALAGAE 201 (218)
T ss_dssp SCCG-GGGGGGTTSCEEEEEESGGGSHHH
T ss_pred CCCH-HHHHHHHHcCCCEEEEchhhcCCC
Confidence 5443 356788999999999998877653
No 329
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=90.83 E-value=4 Score=42.26 Aligned_cols=133 Identities=12% Similarity=0.157 Sum_probs=88.8
Q ss_pred CCcEEEeCCCC-CC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEE
Q 012478 150 SIPVIGDGDNG-YG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVI 227 (462)
Q Consensus 150 ~iPVIaD~DtG-yG-~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vI 227 (462)
.+|+..=. .| +| +++.+.+.++++.+.|...+||-= |. +.++-+++|+|++++. |+++.|
T Consensus 187 ~~p~y~~~-~g~~~~~~e~~~~~a~~~~~~Gf~~~KlKv-------G~-------~~~~d~~~v~avR~a~---G~~~~l 248 (441)
T 4a35_A 187 GYPAYTTS-CAWLGYSDDTLKQLCAQALKDGWTRFKVKV-------GA-------DLQDDMRRCQIIRDMI---GPEKTL 248 (441)
T ss_dssp CEEEEECT-TCCTTCCHHHHHHHHHHHHHTTCCEEEEEC-------SS-------CHHHHHHHHHHHHHHH---CTTSEE
T ss_pred CcceEEec-cccCCCCHHHHHHHHHHHHHCCCCEEEEcC-------CC-------CHHHHHHHHHHHHHHh---CCCCeE
Confidence 46766522 23 34 578888899999999999999932 22 4567788999887774 566655
Q ss_pred EEecchhhcccHHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHh---CCCCceeeeeeecCCCCCCCCHHHH--
Q 012478 228 VARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEI---SPLVPKMANMLEGGGKTPILNPLEL-- 299 (462)
Q Consensus 228 iARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~---v~~vP~~~N~l~~~g~tP~ls~~eL-- 299 (462)
+.|+-.....++|++.++++.+.| ..|+|-+ .+.+.++++.+. .+ +|+..+ .. ..+..++
T Consensus 249 --~vDaN~~~~~~~A~~~~~~L~~~~--~~~iEeP~~~~d~~~~~~l~~~l~~~~-iPIa~g-----E~--~~~~~~~~~ 316 (441)
T 4a35_A 249 --MMDANQRWDVPEAVEWMSKLAKFK--PLWIEEPTSPDDILGHATISKALVPLG-IGIATG-----EQ--CHNRVIFKQ 316 (441)
T ss_dssp --EEECTTCCCHHHHHHHHHHHGGGC--CSEEECCSCTTCHHHHHHHHHHHGGGT-CEEEEC-----TT--CCSHHHHHH
T ss_pred --EEECCCCCCHHHHHHHHHhhcccC--ccEEeCCCCcccHHHHHHHHHhccCCC-CCEEeC-----Cc--cccHHHHHH
Confidence 458888888999999999999876 4567754 346677888876 33 565533 11 2355444
Q ss_pred -HhcC-CCEEeccch
Q 012478 300 -EELG-FKLVAYPLS 312 (462)
Q Consensus 300 -~~lG-v~~V~yp~~ 312 (462)
-+.| +..+..-..
T Consensus 317 ~l~~~a~div~~d~~ 331 (441)
T 4a35_A 317 LLQAKALQFLQIDSC 331 (441)
T ss_dssp HHHTTCCSEECCCTT
T ss_pred HHHcCCCCEEEECcc
Confidence 4445 666555333
No 330
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=90.78 E-value=5 Score=41.03 Aligned_cols=152 Identities=14% Similarity=0.095 Sum_probs=91.6
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCC--CCCCCC-------------CCccc----CHHHHHHH
Q 012478 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPK--GCGHTR-------------GRKVV----SREEAVMR 210 (462)
Q Consensus 150 ~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PK--rCGH~~-------------gk~Lv----p~ee~~~k 210 (462)
.+|+-+-. +..+++.+.+.++++.+.|..++||-=+...+ .+|+.. +..-. ..++.+++
T Consensus 132 ~v~~y~~~--~~~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~ 209 (418)
T 3r4e_A 132 GIMVYGHA--NGSDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKL 209 (418)
T ss_dssp SEEEEEEE--EESSHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHH
T ss_pred eeeEEEeC--CCCCHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHH
Confidence 36664432 22467888899999999999999984321000 011110 00001 13566788
Q ss_pred HHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCC-CCHHHHHHHHHhCCCCceeeeeeecCC
Q 012478 211 IKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMANMLEGGG 289 (462)
Q Consensus 211 I~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N~l~~~g 289 (462)
|+|++++. |+++.|.. |+.....+++|++-++++.+.|.+.|==+.. .+.+.++++.+.++ +|+.++=..
T Consensus 210 v~avR~a~---G~d~~l~v--DaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~-iPIa~dE~~--- 280 (418)
T 3r4e_A 210 FEELRKTY---GFDHHLLH--DGHHRYTPQEAANLGKMLEPYQLFWLEDCTPAENQEAFRLVRQHTV-TPLAVGEIF--- 280 (418)
T ss_dssp HHHHHHHH---CSSSEEEE--ECTTCSCHHHHHHHHHHHGGGCCSEEESCSCCSSGGGGHHHHHHCC-SCEEECTTC---
T ss_pred HHHHHHHc---CCCCeEEE--eCCCCCCHHHHHHHHHHHHhhCCCEEECCCCccCHHHHHHHHhcCC-CCEEEcCCc---
Confidence 88887764 67776654 7777778999999999999998765532221 25678888988876 676543111
Q ss_pred CCCCCCHHHHHhcC-CCEEeccchH
Q 012478 290 KTPILNPLELEELG-FKLVAYPLSL 313 (462)
Q Consensus 290 ~tP~ls~~eL~~lG-v~~V~yp~~l 313 (462)
.+ .-..+++-+.| +..|..-..-
T Consensus 281 ~~-~~~~~~~l~~~a~d~v~~k~~~ 304 (418)
T 3r4e_A 281 NT-IWDAKDLIQNQLIDYIRATVVG 304 (418)
T ss_dssp CS-GGGTHHHHHTTCCSEECCCTTT
T ss_pred CC-HHHHHHHHHcCCCCeEecCccc
Confidence 11 12345566666 6666664443
No 331
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=90.77 E-value=4 Score=38.29 Aligned_cols=127 Identities=22% Similarity=0.199 Sum_probs=75.5
Q ss_pred HHHHHHHHhCCcEEEec-cHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeC--CCCCCCHHHHHHHHHHHHH
Q 012478 100 LSAKLVEKSGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDG--DNGYGNAMNVKRTVKGYIK 176 (462)
Q Consensus 100 lSArl~e~aGfdaI~vS-G~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~--DtGyG~~~nv~rtVk~l~~ 176 (462)
..++.+.+.|++.|=+- -.+. ...| ..+++.+.++.|+++++ |+++=+ ++++-+..++.+.++.+++
T Consensus 74 ~~~~~A~~~Gad~Id~viN~g~--~~~~-------~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~e 143 (225)
T 1mzh_A 74 KEAVEAVRDGAQELDIVWNLSA--FKSE-------KYDFVVEELKEIFRETP-SAVHKVIVETPYLNEEEIKKAVEICIE 143 (225)
T ss_dssp HHHHHHHHTTCSEEEEECCHHH--HHTT-------CHHHHHHHHHHHHHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEecHHH--HhcC-------ChHHHHHHHHHHHHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 44566778999998742 2221 1112 23577777888888877 766644 4554466788999999999
Q ss_pred hCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcE
Q 012478 177 AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADV 256 (462)
Q Consensus 177 AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~ 256 (462)
+||++|+.--+. ..+|. +. +.+..++.++ +.++-|+|--+-.. .+.+.++.++|||.
T Consensus 144 aGad~I~tstg~------~~gga---~~-~~i~~v~~~v------~~~ipVia~GGI~t-------~~da~~~l~aGA~~ 200 (225)
T 1mzh_A 144 AGADFIKTSTGF------APRGT---TL-EEVRLIKSSA------KGRIKVKASGGIRD-------LETAISMIEAGADR 200 (225)
T ss_dssp HTCSEEECCCSC------SSSCC---CH-HHHHHHHHHH------TTSSEEEEESSCCS-------HHHHHHHHHTTCSE
T ss_pred hCCCEEEECCCC------CCCCC---CH-HHHHHHHHHh------CCCCcEEEECCCCC-------HHHHHHHHHhCchH
Confidence 999999653321 11221 22 3444444332 23555665543332 23466667899996
Q ss_pred EEe
Q 012478 257 LFI 259 (462)
Q Consensus 257 Ifi 259 (462)
|=+
T Consensus 201 iG~ 203 (225)
T 1mzh_A 201 IGT 203 (225)
T ss_dssp EEE
T ss_pred HHH
Confidence 543
No 332
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=90.74 E-value=0.9 Score=47.29 Aligned_cols=121 Identities=21% Similarity=0.230 Sum_probs=82.3
Q ss_pred CCHHHHHHHHHHHHHh-CccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHH
Q 012478 162 GNAMNVKRTVKGYIKA-GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (462)
Q Consensus 162 G~~~nv~rtVk~l~~A-GaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gld 240 (462)
.+++.+.+.++++.+. |...+||-- |. .+.++-+++|+|++++. +++.| +.|+-....++
T Consensus 190 ~~~e~~~~~a~~~~~~~Gf~~~KlKv-------G~------~~~~~Di~~v~avRea~----~~~~L--~vDaN~~w~~~ 250 (445)
T 3va8_A 190 LDPEGVVKQAKKIIDEYGFKAIKLKG-------GV------FPPADEVAAIKALHKAF----PGVPL--RLDPNAAWTVE 250 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEEC-------SS------SCHHHHHHHHHHHHHHS----TTCCE--EEECTTCBCHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcc-------CC------CCHHHHHHHHHHHHHhC----CCCcE--eeeCCCCCCHH
Confidence 3577888888888764 999999942 22 24566688999988875 34333 45888888899
Q ss_pred HHHHHHHHhHhcCCcEEEecCC-CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcC-CCEEec
Q 012478 241 ESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELG-FKLVAY 309 (462)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lG-v~~V~y 309 (462)
+|++-++++++. ..|+|-+ ++.+.++++.+..+ +|+..+-.. +-.....++-+.| +..+..
T Consensus 251 ~Ai~~~~~L~~~---l~~iEeP~~d~~~~~~l~~~~~-iPIa~dE~~----~~~~~~~~~i~~~a~div~~ 313 (445)
T 3va8_A 251 TSKWVAKELEGI---VEYLEDPAGEIEGMAAVAKEAS-MPLATNMAV----VAFDHLPPSILQDAVQVILS 313 (445)
T ss_dssp HHHHHHHHTTTT---CSEEESCBSHHHHHHHHHTTCS-SCEEESSSC----CSGGGHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHhhh---cCeEeecCcCHHHHHHHHHcCC-CCEEeCCcc----CCHHHHHHHHHcCCCCEEEe
Confidence 999999999875 5677765 56678888888775 677654221 1112345566666 555444
No 333
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=90.70 E-value=0.99 Score=45.12 Aligned_cols=87 Identities=14% Similarity=0.183 Sum_probs=54.9
Q ss_pred HHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCC
Q 012478 211 IKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGK 290 (462)
Q Consensus 211 I~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~ 290 (462)
|.+|+++.++..++..|..-+|. ++ .++...+||||.|+++-+. .++++++++.+.+ -.. +-..||-
T Consensus 194 i~~Av~~ar~~~p~~kIeVEv~t-----l~----e~~eAl~aGaDiImLDn~s-~~~l~~av~~~~~-~v~--leaSGGI 260 (300)
T 3l0g_A 194 ITLAIQRLRKNLKNEYIAIECDN-----IS----QVEESLSNNVDMILLDNMS-ISEIKKAVDIVNG-KSV--LEVSGCV 260 (300)
T ss_dssp HHHHHHHHHHHSSSCCEEEEESS-----HH----HHHHHHHTTCSEEEEESCC-HHHHHHHHHHHTT-SSE--EEEESSC
T ss_pred HHHHHHHHHHhCCCCCEEEEECC-----HH----HHHHHHHcCCCEEEECCCC-HHHHHHHHHhhcC-ceE--EEEECCC
Confidence 33443333322345555555443 34 3455566899999999864 5899988887653 111 1223454
Q ss_pred CCCCCHHHHHhcCCCEEeccc
Q 012478 291 TPILNPLELEELGFKLVAYPL 311 (462)
Q Consensus 291 tP~ls~~eL~~lGv~~V~yp~ 311 (462)
++ -+..++.+.||..++.+.
T Consensus 261 t~-~~i~~~A~tGVD~IsvGa 280 (300)
T 3l0g_A 261 NI-RNVRNIALTGVDYISIGC 280 (300)
T ss_dssp CT-TTHHHHHTTTCSEEECGG
T ss_pred CH-HHHHHHHHcCCCEEEeCc
Confidence 44 488999999999999875
No 334
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=90.70 E-value=6.9 Score=37.82 Aligned_cols=159 Identities=9% Similarity=0.007 Sum_probs=97.6
Q ss_pred HHHHHHHHhCCC-ceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHh---hcCCcE
Q 012478 78 AKSLRQILELPG-VHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQ---AVSIPV 153 (462)
Q Consensus 78 a~~LR~ll~~~~-~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~r---a~~iPV 153 (462)
.+.++.+.+.++ ++.+.. -+.-..+.+-++|++.|.+...+ |-. +-.-. -..+.+|.++.++.+.+ ..++.|
T Consensus 61 ~e~~~~i~~~~~~~v~~l~-~n~~~i~~a~~~G~~~V~i~~~~-S~~-h~~~~-~~~~~~e~~~~~~~~v~~a~~~G~~V 136 (295)
T 1ydn_A 61 REVMAGIRRADGVRYSVLV-PNMKGYEAAAAAHADEIAVFISA-SEG-FSKAN-INCTIAESIERLSPVIGAAINDGLAI 136 (295)
T ss_dssp HHHHHHSCCCSSSEEEEEC-SSHHHHHHHHHTTCSEEEEEEES-CHH-HHHHH-TSSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHhCCCCEEEEEe-CCHHHHHHHHHCCCCEEEEEEec-CHH-HHHHH-cCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 344555543322 333322 34555566667899988776211 100 00101 23578888888776654 346777
Q ss_pred E------EeCCCC-CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeE
Q 012478 154 I------GDGDNG-YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIV 226 (462)
Q Consensus 154 I------aD~DtG-yG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~v 226 (462)
. ++.+++ +-++..+.+.++.+.++|+..|.|-|.. |. ..+++..+.|+++++.... ..+.
T Consensus 137 ~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~Dt~-----G~------~~P~~~~~lv~~l~~~~~~--~~l~ 203 (295)
T 1ydn_A 137 RGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLGDTI-----GR------GTPDTVAAMLDAVLAIAPA--HSLA 203 (295)
T ss_dssp EEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEEEETT-----SC------CCHHHHHHHHHHHHTTSCG--GGEE
T ss_pred EEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEecCCC-----CC------cCHHHHHHHHHHHHHhCCC--CeEE
Confidence 6 555554 3478899999999999999999999864 32 3466777788777655321 2355
Q ss_pred EEEecchhhcccHHHHHHHHHHhHhcCCcEEEe
Q 012478 227 IVARTDSRQALSLEESLRRSRAFADAGADVLFI 259 (462)
Q Consensus 227 IiARTDA~~~~gldeAI~RakAy~eAGAD~Ifi 259 (462)
+-+..|.- -++....+..++||+.|=.
T Consensus 204 ~H~Hn~~G------la~an~l~Ai~aG~~~vd~ 230 (295)
T 1ydn_A 204 GHYHDTGG------RALDNIRVSLEKGLRVFDA 230 (295)
T ss_dssp EEEBCTTS------CHHHHHHHHHHHTCCEEEE
T ss_pred EEECCCcc------hHHHHHHHHHHhCCCEEEe
Confidence 55554541 2345667778899997754
No 335
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=90.66 E-value=4 Score=43.97 Aligned_cols=140 Identities=14% Similarity=0.147 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHhCccEEEeCCCC-C-----------CCCCCCCCCCcccCH-HHHHHHHHHHHHHHHhhCCCeEEEEec
Q 012478 165 MNVKRTVKGYIKAGFAGIILEDQV-S-----------PKGCGHTRGRKVVSR-EEAVMRIKAAVDARKESGSDIVIVART 231 (462)
Q Consensus 165 ~nv~rtVk~l~~AGaaGI~IEDq~-~-----------PKrCGH~~gk~Lvp~-ee~~~kI~AA~~Ar~~~g~d~vIiART 231 (462)
....++++...+||++||-|-..- + .||.-.-+|- +-.. .-..+-|+|++++ .|.||.|..|.
T Consensus 156 ~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs-~enR~r~~~ei~~avr~~---~g~~~~v~~r~ 231 (690)
T 3k30_A 156 RWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGS-LENRMRLLRELLEDTLDE---CAGRAAVACRI 231 (690)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSS-HHHHTHHHHHHHHHHHHH---HTTSSEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCC-HHHHHHHHHHHHHHHHHH---hCCCceEEEEE
Confidence 345566777888999999995431 1 2333222331 2111 1223334444443 36789888886
Q ss_pred chh----hcccHHHHHHHHHHhHhcCCcEEEecCCC---------------CHHHHHHHHHhCCCCceeeeeeecCCCC-
Q 012478 232 DSR----QALSLEESLRRSRAFADAGADVLFIDALA---------------SKEEMKAFCEISPLVPKMANMLEGGGKT- 291 (462)
Q Consensus 232 DA~----~~~gldeAI~RakAy~eAGAD~Ifie~~~---------------s~eei~~i~~~v~~vP~~~N~l~~~g~t- 291 (462)
... .....+++++-++++++ |+|++-+.... ..+.++++.+.+. +|++.| |+-+
T Consensus 232 s~~~~~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~pvi~~----G~i~~ 305 (690)
T 3k30_A 232 TVEEEIDGGITREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTT-KPVVGV----GRFTS 305 (690)
T ss_dssp ECCCCSTTSCCHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCS-SCEEEC----SCCCC
T ss_pred CccccCCCCCCHHHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCccccHHHHHHHHHHcC-CeEEEe----CCCCC
Confidence 432 12347889998998888 89998876421 1233444444554 676544 2211
Q ss_pred CCCCHHHHHhcC-CCEEeccchHHH
Q 012478 292 PILNPLELEELG-FKLVAYPLSLIG 315 (462)
Q Consensus 292 P~ls~~eL~~lG-v~~V~yp~~ll~ 315 (462)
| -..+++-+-| +..|.++-.++.
T Consensus 306 ~-~~a~~~l~~g~~d~v~~gR~~~~ 329 (690)
T 3k30_A 306 P-DAMVRQIKAGILDLIGAARPSIA 329 (690)
T ss_dssp H-HHHHHHHHTTSCSEEEESHHHHH
T ss_pred H-HHHHHHHHCCCcceEEEcHHhHh
Confidence 1 1234444445 999999876654
No 336
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=90.63 E-value=0.49 Score=43.61 Aligned_cols=94 Identities=22% Similarity=0.237 Sum_probs=60.1
Q ss_pred hHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccH-HHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEE
Q 012478 77 PAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGF-SISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIG 155 (462)
Q Consensus 77 ~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~-avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIa 155 (462)
..+.+++++. +.++...+++.-.++.+++.|+|.+.++.. ... ..|+....+ ++..+.+.+..++||++
T Consensus 100 ~~~~~~~~~~--~~~ig~sv~t~~~~~~a~~~gaD~i~~~~~f~~~----~~~g~~~~~----~~~l~~~~~~~~~pvia 169 (221)
T 1yad_A 100 SPKQIRARFP--HLHIGRSVHSLEEAVQAEKEDADYVLFGHVFETD----CKKGLEGRG----VSLLSDIKQRISIPVIA 169 (221)
T ss_dssp CHHHHHHHCT--TCEEEEEECSHHHHHHHHHTTCSEEEEECCC--------------CH----HHHHHHHHHHCCSCEEE
T ss_pred CHHHHHHHCC--CCEEEEEcCCHHHHHHHHhCCCCEEEECCccccC----CCCCCCCCC----HHHHHHHHHhCCCCEEE
Confidence 3566777653 566677899999999999999999998752 111 122211222 34456666667899999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHhCccEEEeCCC
Q 012478 156 DGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQ 187 (462)
Q Consensus 156 D~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq 187 (462)
++ |- ++.| ++.+.++|++||-+=-.
T Consensus 170 ~G--GI-~~~n----v~~~~~~Ga~gv~vgs~ 194 (221)
T 1yad_A 170 IG--GM-TPDR----LRDVKQAGADGIAVMSG 194 (221)
T ss_dssp ES--SC-CGGG----HHHHHHTTCSEEEESHH
T ss_pred EC--CC-CHHH----HHHHHHcCCCEEEEhHH
Confidence 83 22 4444 45666799999998443
No 337
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=90.61 E-value=0.82 Score=49.19 Aligned_cols=89 Identities=15% Similarity=0.102 Sum_probs=59.0
Q ss_pred ceEecccCChHHHHHHHHhCCcEEEec-cHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHH
Q 012478 90 VHQGPACFDALSAKLVEKSGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVK 168 (462)
Q Consensus 90 ~iv~p~ayDalSArl~e~aGfdaI~vS-G~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~ 168 (462)
++++=|+-++-.|+.+.++|+|++-++ |-+-.++..-.--.+ ++.-.-+..+...++..++|||+|.---| +-++.
T Consensus 324 ~viaGNVaT~e~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG-~PQ~tAi~~~a~~a~~~~vpvIADGGI~~--sGDi~ 400 (556)
T 4af0_A 324 DVIAGNVVTREQAAQLIAAGADGLRIGMGSGSICITQEVMAVG-RPQGTAVYAVAEFASRFGIPCIADGGIGN--IGHIA 400 (556)
T ss_dssp EEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCCTTTCCSC-CCHHHHHHHHHHHHGGGTCCEEEESCCCS--HHHHH
T ss_pred eEEeccccCHHHHHHHHHcCCCEEeecCCCCcccccccccCCC-CcHHHHHHHHHHHHHHcCCCEEecCCcCc--chHHH
Confidence 567779999999999999999999998 444322211111112 34444455566677778999999954443 33344
Q ss_pred HHHHHHHHhCccEEEeC
Q 012478 169 RTVKGYIKAGFAGIILE 185 (462)
Q Consensus 169 rtVk~l~~AGaaGI~IE 185 (462)
+.+.+||+.|.|-
T Consensus 401 ----KAlaaGAd~VMlG 413 (556)
T 4af0_A 401 ----KALALGASAVMMG 413 (556)
T ss_dssp ----HHHHTTCSEEEES
T ss_pred ----HHhhcCCCEEEEc
Confidence 3346999999993
No 338
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=90.58 E-value=5.6 Score=38.72 Aligned_cols=167 Identities=13% Similarity=0.105 Sum_probs=93.3
Q ss_pred cccCCCccccccCchH---HHHHHHHh--CCCceEecccCChH------HHHHHHHhCCcEEEeccHHHHhhhccCCCCC
Q 012478 63 VYRKNSTGVEACLSPA---KSLRQILE--LPGVHQGPACFDAL------SAKLVEKSGFSFCFTSGFSISAARLALPDTG 131 (462)
Q Consensus 63 ~y~rgs~~~~~a~~~a---~~LR~ll~--~~~~iv~p~ayDal------SArl~e~aGfdaI~vSG~avSas~lG~PD~g 131 (462)
.+.-||...-+..+.. +-++...+ .++.-++.|+-..- -|+.++++|+|++++.. |-..
T Consensus 38 l~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~----------P~y~ 107 (292)
T 2vc6_A 38 LVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVS----------PYYN 107 (292)
T ss_dssp EETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC----------CCSS
T ss_pred EEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcC----------CCCC
Confidence 4455666655433332 22333332 34443445544422 35667788999998763 1112
Q ss_pred CCCHHHHHHHHHHHHhhcCCcEEE-eCC--CCCC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHH
Q 012478 132 FISYGEMVDQGQLITQAVSIPVIG-DGD--NGYG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEA 207 (462)
Q Consensus 132 ~vsl~Eml~~~~~I~ra~~iPVIa-D~D--tGyG-~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~ 207 (462)
..+-+++.+|-+.|++++++||+. +.| +|+. .+..+.+..++. -.+.|||-... .
T Consensus 108 ~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~--pnIvgiK~s~g-------d------------ 166 (292)
T 2vc6_A 108 KPTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFEDC--PNVKGVXDATG-------N------------ 166 (292)
T ss_dssp CCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHC--TTEEEEEECSC-------C------------
T ss_pred CCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHhhC--CCEEEEecCCC-------C------------
Confidence 247899999999999999999876 777 4543 344444443212 57889986332 1
Q ss_pred HHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEec-CCCCHHHHHHHHHh
Q 012478 208 VMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFID-ALASKEEMKAFCEI 274 (462)
Q Consensus 208 ~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie-~~~s~eei~~i~~~ 274 (462)
..++...++.. +++|.|..=.|.. ...+..+||+..+-- +---++.+.++.+.
T Consensus 167 ~~~~~~~~~~~---~~~f~v~~G~d~~-----------~~~~l~~G~~G~is~~~n~~P~~~~~l~~a 220 (292)
T 2vc6_A 167 LLRPSLERMAC---GEDFNLLTGEDGT-----------ALGYMAHGGHGCISVTANVAPALCADFQQA 220 (292)
T ss_dssp THHHHHHHHHS---CTTSEEEESCGGG-----------HHHHHHTTCCEEEESGGGTCHHHHHHHHHH
T ss_pred HHHHHHHHHHc---CCCEEEEECchHH-----------HHHHHHcCCCEEEecHHHhCHHHHHHHHHH
Confidence 12333333222 3578777555543 223356899976642 21235666666654
No 339
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=90.58 E-value=1.8 Score=44.28 Aligned_cols=97 Identities=11% Similarity=0.167 Sum_probs=71.7
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
.+....+.++.+.+.|...+||--. .. .++.+++|++++++. |+++.| +.|+-....+++|
T Consensus 188 ~~~~~~~~a~~~~~~G~~~~K~k~g-------~~-------~~~~~~~v~~vR~~~---g~~~~l--~vDaN~~~~~~~A 248 (412)
T 4h1z_A 188 TRAKRAELAAAWQAKGFSSFKFASP-------VA-------DDGVAKEMEILRERL---GPAVRI--ACDMHWAHTASEA 248 (412)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGG-------GC-------TTCHHHHHHHHHHHH---CSSSEE--EEECCSCCCHHHH
T ss_pred cHHHHHHHHHHHHhcCcceeccccc-------cc-------hhhHHHHHHHHHhcc---CCeEEE--EeccccCCCHHHH
Confidence 4567788889999999999999322 11 123456777776653 667655 5688888899999
Q ss_pred HHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCcee
Q 012478 243 LRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKM 281 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~ 281 (462)
++.++++.+.| ..|+|-+ .+.+.++++.+.++ +|+.
T Consensus 249 ~~~~~~l~~~~--l~~iEqP~~~~d~~~~~~l~~~~~-iPIa 287 (412)
T 4h1z_A 249 VALIKAMEPHG--LWFAEAPVRTEDIDGLARVAASVS-TAIA 287 (412)
T ss_dssp HHHHHHHGGGC--EEEEECCSCTTCHHHHHHHHHHCS-SEEE
T ss_pred HHHHHhhcccc--cceecCCCCccchHHHHHHHhhcC-Cccc
Confidence 99999999886 6688865 36788899988876 6664
No 340
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=90.56 E-value=1.3 Score=40.51 Aligned_cols=76 Identities=20% Similarity=0.219 Sum_probs=51.2
Q ss_pred ceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcC--CcEEEeCCCCCCCHHHH
Q 012478 90 VHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVS--IPVIGDGDNGYGNAMNV 167 (462)
Q Consensus 90 ~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~--iPVIaD~DtGyG~~~nv 167 (462)
.-++++|++...++.+.+.|+|.+.+-. . ...+ ++..+.+++..+ +||+++. |- +.
T Consensus 102 ~~~~~g~~t~~e~~~a~~~G~d~v~v~~--t----------~~~g----~~~~~~l~~~~~~~ipvia~G--GI-~~--- 159 (212)
T 2v82_A 102 MTVCPGCATATEAFTALEAGAQALKIFP--S----------SAFG----PQYIKALKAVLPSDIAVFAVG--GV-TP--- 159 (212)
T ss_dssp CEEECEECSHHHHHHHHHTTCSEEEETT--H----------HHHC----HHHHHHHHTTSCTTCEEEEES--SC-CT---
T ss_pred CCEEeecCCHHHHHHHHHCCCCEEEEec--C----------CCCC----HHHHHHHHHhccCCCeEEEeC--CC-CH---
Confidence 4457889999999888899999988621 0 0111 345566666664 9999983 21 22
Q ss_pred HHHHHHHHHhCccEEEeCCCC
Q 012478 168 KRTVKGYIKAGFAGIILEDQV 188 (462)
Q Consensus 168 ~rtVk~l~~AGaaGI~IEDq~ 188 (462)
++++++.++||+||.+=-..
T Consensus 160 -~~i~~~~~~Ga~gv~vGsai 179 (212)
T 2v82_A 160 -ENLAQWIDAGCAGAGLGSDL 179 (212)
T ss_dssp -TTHHHHHHHTCSEEEECTTT
T ss_pred -HHHHHHHHcCCCEEEEChHH
Confidence 45567778999999984433
No 341
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=90.53 E-value=4.2 Score=39.60 Aligned_cols=167 Identities=13% Similarity=0.074 Sum_probs=94.7
Q ss_pred cccCCCccccccCchH---HHHHHHHh--CCCceEecccCCh------HHHHHHHHhCCcEEEeccHHHHhhhccCCCCC
Q 012478 63 VYRKNSTGVEACLSPA---KSLRQILE--LPGVHQGPACFDA------LSAKLVEKSGFSFCFTSGFSISAARLALPDTG 131 (462)
Q Consensus 63 ~y~rgs~~~~~a~~~a---~~LR~ll~--~~~~iv~p~ayDa------lSArl~e~aGfdaI~vSG~avSas~lG~PD~g 131 (462)
.+.-||...-+..+.. +-++...+ .++.-++.|+-.. --|+.++++|+|++++.. |-..
T Consensus 38 l~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~----------P~y~ 107 (294)
T 2ehh_A 38 ILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVV----------PYYN 107 (294)
T ss_dssp EEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEEC----------CCSS
T ss_pred EEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC----------CCCC
Confidence 4556666655433332 22333332 3444455555442 235667788999998763 1122
Q ss_pred CCCHHHHHHHHHHHHhhcCCcEEE-eCCC--CCC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHH
Q 012478 132 FISYGEMVDQGQLITQAVSIPVIG-DGDN--GYG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEA 207 (462)
Q Consensus 132 ~vsl~Eml~~~~~I~ra~~iPVIa-D~Dt--GyG-~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~ 207 (462)
..+-+++.+|.+.|++++++||+. +.|. |+. .++.+.+.+++ .-.+.|||-.. |.
T Consensus 108 ~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--~pnivgiKds~-------gd------------ 166 (294)
T 2ehh_A 108 KPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLASE--CENIVASKEST-------PN------------ 166 (294)
T ss_dssp CCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHHHH--CTTEEEEEECC-------SC------------
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHHhh--CCCEEEEEeCC-------CC------------
Confidence 247899999999999999999876 7773 543 44455555432 24789998322 21
Q ss_pred HHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCC-CCHHHHHHHHHh
Q 012478 208 VMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEI 274 (462)
Q Consensus 208 ~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~ 274 (462)
..++...++.. +++|.|..=.|.. ...+..+|++..+--.- --++++.++.+.
T Consensus 167 ~~~~~~~~~~~---~~~f~v~~G~d~~-----------~~~~l~~G~~G~is~~an~~P~~~~~l~~a 220 (294)
T 2ehh_A 167 MDRISEIVKRL---GESFSVLSGDDSL-----------TLPMMALGAKGVISVANNVMPREVKELIRA 220 (294)
T ss_dssp HHHHHHHHHHH---CTTSEEEESSGGG-----------HHHHHHTTCCEEEESGGGTCHHHHHHHHHH
T ss_pred HHHHHHHHHhc---CCCeEEEECcHHH-----------HHHHHHCCCCEEEeCHHHhhHHHHHHHHHH
Confidence 22333333322 3578777655543 22234589998764321 134566666554
No 342
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=90.52 E-value=2.5 Score=41.54 Aligned_cols=103 Identities=17% Similarity=0.181 Sum_probs=54.9
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHH
Q 012478 161 YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (462)
Q Consensus 161 yG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gld 240 (462)
|-+...+.+.++++++.||+-|-|-.+.. ..|-+-++.+|-.+|+.-++++..+. +..|-- |....
T Consensus 25 ~~~~~~a~~~a~~~v~~GAdiIDIGgest------rpga~~v~~~eE~~Rv~pvi~~l~~~--~~piSI--DT~~~---- 90 (280)
T 1eye_A 25 YLDLDDAVKHGLAMAAAGAGIVDVGGESS------RPGATRVDPAVETSRVIPVVKELAAQ--GITVSI--DTMRA---- 90 (280)
T ss_dssp CCSHHHHHHHHHHHHHTTCSEEEEECC--------------------HHHHHHHHHHHHHT--TCCEEE--ECSCH----
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCccC------CCCCCCCCHHHHHHHHHHHHHHhhcC--CCEEEE--eCCCH----
Confidence 44567888889999999999999965421 12334456666667776666665432 444433 33322
Q ss_pred HHHHHHHHhHhcCCcEEE-ecCCCCHHHHHHHHHhCCCCcee
Q 012478 241 ESLRRSRAFADAGADVLF-IDALASKEEMKAFCEISPLVPKM 281 (462)
Q Consensus 241 eAI~RakAy~eAGAD~If-ie~~~s~eei~~i~~~v~~vP~~ 281 (462)
+ =+++..++||++|- +.+....+++..+++... +|..
T Consensus 91 ~---va~aAl~aGa~iINdvsg~~~d~~m~~~~a~~~-~~vV 128 (280)
T 1eye_A 91 D---VARAALQNGAQMVNDVSGGRADPAMGPLLAEAD-VPWV 128 (280)
T ss_dssp H---HHHHHHHTTCCEEEETTTTSSCTTHHHHHHHHT-CCEE
T ss_pred H---HHHHHHHcCCCEEEECCCCCCCHHHHHHHHHhC-CeEE
Confidence 2 24445567999996 344431245666666554 4544
No 343
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=90.52 E-value=3.1 Score=40.16 Aligned_cols=82 Identities=20% Similarity=0.319 Sum_probs=54.0
Q ss_pred HHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHh
Q 012478 170 TVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAF 249 (462)
Q Consensus 170 tVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy 249 (462)
.++++..+|++.|.|.=+ |. +.+.+...+.++++.. .+.-++-|...... ...++.
T Consensus 29 ~~e~a~~~g~D~vilDlE-------ha----v~~~~k~~~~l~a~~~------~~~~~~VRVn~~~~-------~di~~~ 84 (261)
T 3qz6_A 29 IVRIYAEAGLDYFIVDCE-------HA----AYTFREINHLVSVAKN------AGVSVLVRIPQVDR-------AHVQRL 84 (261)
T ss_dssp HHHHHHHTTCSEEEEESS-------SS----CCCHHHHHHHHHHHHH------HTCEEEEECSSCCH-------HHHHHH
T ss_pred HHHHHhcCCcCEEEEecc-------CC----CCCHHHHHHHHHHHhh------cCCeEEEEeCCCCH-------HHHHHH
Confidence 345666789999986322 21 3445545555544432 13456668765321 246667
Q ss_pred HhcCCcEEEecCCCCHHHHHHHHHhC
Q 012478 250 ADAGADVLFIDALASKEEMKAFCEIS 275 (462)
Q Consensus 250 ~eAGAD~Ifie~~~s~eei~~i~~~v 275 (462)
.++|+|.|+++.+.+.++++++.+.+
T Consensus 85 ld~G~~gI~lP~v~saed~~~~~~~~ 110 (261)
T 3qz6_A 85 LDIGAEGFMIPGVQSAETMRETVRLA 110 (261)
T ss_dssp HHHTCCEEEETTCCSHHHHHHHHHHH
T ss_pred HhcCCCEEEECCcCCHHHHHHHHHHh
Confidence 78999999999999999999988764
No 344
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=90.51 E-value=6.7 Score=39.50 Aligned_cols=153 Identities=12% Similarity=0.026 Sum_probs=85.8
Q ss_pred HHHHHHHHhCCcEEEec---cHHHHhh---h-ccCCCCCCCCHH----HHHHHHHHHHhhcC-CcEEEeCC-----CC--
Q 012478 100 LSAKLVEKSGFSFCFTS---GFSISAA---R-LALPDTGFISYG----EMVDQGQLITQAVS-IPVIGDGD-----NG-- 160 (462)
Q Consensus 100 lSArl~e~aGfdaI~vS---G~avSas---~-lG~PD~g~vsl~----Eml~~~~~I~ra~~-iPVIaD~D-----tG-- 160 (462)
-.|+.+.++|||+|=+- |+-+.-. . .-.-|.---+++ -+++.++.|+++++ -||.+-+- .|
T Consensus 165 ~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~ 244 (365)
T 2gou_A 165 QAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTV 244 (365)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCC
T ss_pred HHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCCC
Confidence 45677888999999985 3332210 0 111232112343 23444566666553 28888222 11
Q ss_pred CCCH-HHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccH
Q 012478 161 YGNA-MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (462)
Q Consensus 161 yG~~-~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gl 239 (462)
-+.. ....+.++.++++|++.|++-..... +++-.+. +++.+|+.++ +..++.+++-+
T Consensus 245 ~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~-------~~~~~~~-~~~~~i~~~~------~iPvi~~Ggi~------- 303 (365)
T 2gou_A 245 DADPILTYTAAAALLNKHRIVYLHIAEVDWD-------DAPDTPV-SFKRALREAY------QGVLIYAGRYN------- 303 (365)
T ss_dssp CSSHHHHHHHHHHHHHHTTCSEEEEECCBTT-------BCCCCCH-HHHHHHHHHC------CSEEEEESSCC-------
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCcC-------CCCCccH-HHHHHHHHHC------CCcEEEeCCCC-------
Confidence 1233 57788899999999999999654321 1112333 4444544322 23444454431
Q ss_pred HHHHHHHHHhHhcC-CcEEEec--CCCCHHHHHHHHHhCC
Q 012478 240 EESLRRSRAFADAG-ADVLFID--ALASKEEMKAFCEISP 276 (462)
Q Consensus 240 deAI~RakAy~eAG-AD~Ifie--~~~s~eei~~i~~~v~ 276 (462)
.+.+..+.++| ||+|.+- .+.+++..+++.+..+
T Consensus 304 ---~~~a~~~l~~g~aD~V~igR~~i~~P~l~~~~~~g~~ 340 (365)
T 2gou_A 304 ---AEKAEQAINDGLADMIGFGRPFIANPDLPERLRHGYP 340 (365)
T ss_dssp ---HHHHHHHHHTTSCSEEECCHHHHHCTTHHHHHHHTCC
T ss_pred ---HHHHHHHHHCCCcceehhcHHHHhCchHHHHHHcCCC
Confidence 23566777788 9999873 2445667777776543
No 345
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=90.50 E-value=1.9 Score=44.32 Aligned_cols=151 Identities=13% Similarity=0.113 Sum_probs=90.2
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCC--CCCCC----CC---------CCCcccC----HHHHHHHH
Q 012478 151 IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVS--PKGCG----HT---------RGRKVVS----REEAVMRI 211 (462)
Q Consensus 151 iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~--PKrCG----H~---------~gk~Lvp----~ee~~~kI 211 (462)
+|+-+-. +..+++.+.+.++++.+.|..++||-=+.. +..-| .. .+....+ .++.+++|
T Consensus 140 v~~y~~~--~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v 217 (425)
T 3vcn_A 140 VTVYGHA--NGETIEDTIAEAVKYKAMGYKAIRLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKLF 217 (425)
T ss_dssp EEEEEEE--EESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHHH
T ss_pred eeEEEeC--CCCCHHHHHHHHHHHHHcCCCEEEEeecCccccccccccccccccCcccccccccccccchhHHHHHHHHH
Confidence 6664422 224678888889999999999999842210 00000 00 0000011 23457788
Q ss_pred HHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCC-CCHHHHHHHHHhCCCCceeeeeeecCCC
Q 012478 212 KAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMANMLEGGGK 290 (462)
Q Consensus 212 ~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N~l~~~g~ 290 (462)
+|++++. |+++.|.. |+.....+++|++-++++.+.|.+.|=-+.. .+.+.++++.+.++ +|+.++=.. .
T Consensus 218 ~avR~a~---G~d~~l~v--DaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~-iPIa~dE~~---~ 288 (425)
T 3vcn_A 218 ERAREVL---GWDVHLLH--DVHHRLTPIEAARLGKDLEPYRLFWLEDSVPAENQAGFRLIRQHTT-TPLAVGEIF---A 288 (425)
T ss_dssp HHHHHHH---CSSSEEEE--ECTTCCCHHHHHHHHHHHGGGCCSEEECCSCCSSTTHHHHHHHHCC-SCEEECTTC---C
T ss_pred HHHHHHc---CCCCEEEE--ECCCCCCHHHHHHHHHHHHhcCCCEEECCCChhhHHHHHHHHhcCC-CCEEeCCCc---C
Confidence 8887764 67776654 7767778999999999999998765432222 25678899988876 676543111 1
Q ss_pred CCCCCHHHHHhcC-CCEEeccchH
Q 012478 291 TPILNPLELEELG-FKLVAYPLSL 313 (462)
Q Consensus 291 tP~ls~~eL~~lG-v~~V~yp~~l 313 (462)
++ -..+++-+.| +..|..-..-
T Consensus 289 ~~-~~~~~~i~~~a~d~v~~k~~~ 311 (425)
T 3vcn_A 289 HV-WDAKQLIEEQLIDYLRATVLH 311 (425)
T ss_dssp SG-GGTHHHHHTTCCSEECCCTTT
T ss_pred CH-HHHHHHHHcCCCCeEecChhh
Confidence 11 2345666666 6666654443
No 346
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=90.50 E-value=1.4 Score=43.76 Aligned_cols=87 Identities=17% Similarity=0.126 Sum_probs=52.5
Q ss_pred CCceEeccc---CChHHHHHHHHhCCcEEEeccHHH-Hhhh----cc------CCCCCCCCHHHHHHHHHHHHhhc-CCc
Q 012478 88 PGVHQGPAC---FDALSAKLVEKSGFSFCFTSGFSI-SAAR----LA------LPDTGFISYGEMVDQGQLITQAV-SIP 152 (462)
Q Consensus 88 ~~~iv~p~a---yDalSArl~e~aGfdaI~vSG~av-Sas~----lG------~PD~g~vsl~Eml~~~~~I~ra~-~iP 152 (462)
+.++++-++ ++.-.|+.++++|+|+|.+++.+- .... .. ..+.+ ++..+. ++.+.+.. ++|
T Consensus 178 ~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g-~~~~~~---l~~v~~~~~~ip 253 (349)
T 1p0k_A 178 SVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWG-ISTAAS---LAEIRSEFPAST 253 (349)
T ss_dssp SSCEEEEEESSCCCHHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCS-CCHHHH---HHHHHHHCTTSE
T ss_pred CCCEEEEecCCCCCHHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccC-ccHHHH---HHHHHHhcCCCe
Confidence 456666443 889999999999999999984321 0000 00 02333 333333 34444554 799
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012478 153 VIGDGDNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 153 VIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~I 184 (462)
||++. |..+..++. +++.+||++|.|
T Consensus 254 via~G--GI~~~~d~~----k~l~~GAd~V~i 279 (349)
T 1p0k_A 254 MIASG--GLQDALDVA----KAIALGASCTGM 279 (349)
T ss_dssp EEEES--SCCSHHHHH----HHHHTTCSEEEE
T ss_pred EEEEC--CCCCHHHHH----HHHHcCCCEEEE
Confidence 99984 344555555 444579999998
No 347
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=90.48 E-value=1.2 Score=46.85 Aligned_cols=89 Identities=16% Similarity=0.018 Sum_probs=54.8
Q ss_pred CceEecccCChHHHHHHHHhCCcEEEec-cHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhc------CCcEEEeCCCCC
Q 012478 89 GVHQGPACFDALSAKLVEKSGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAV------SIPVIGDGDNGY 161 (462)
Q Consensus 89 ~~iv~p~ayDalSArl~e~aGfdaI~vS-G~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~------~iPVIaD~DtGy 161 (462)
-++++-++.++-.|+.+.++|++++-++ |.+--+... .-+.-.++.-+.+..+...++.. ++|||+|. |.
T Consensus 285 ~~Vi~G~V~t~~~a~~l~~aGad~I~Vg~~~g~~~~~r-~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~G--Gi 361 (503)
T 1me8_A 285 VKVGAGNIVDGEGFRYLADAGADFIKIGIGGGSICITR-EQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDG--GI 361 (503)
T ss_dssp SCEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCST-TTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEES--CC
T ss_pred ceEeeccccCHHHHHHHHHhCCCeEEecccCCcCcccc-cccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeC--CC
Confidence 3567778999999999999999999985 211100000 01111133333333343444433 69999996 55
Q ss_pred CCHHHHHHHHHHHHHhCccEEEe
Q 012478 162 GNAMNVKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 162 G~~~nv~rtVk~l~~AGaaGI~I 184 (462)
.++.++. +...+||++|.+
T Consensus 362 ~~~~di~----kAlalGA~~V~i 380 (503)
T 1me8_A 362 VYDYHMT----LALAMGADFIML 380 (503)
T ss_dssp CSHHHHH----HHHHTTCSEEEE
T ss_pred CCHHHHH----HHHHcCCCEEEE
Confidence 5665555 334689999998
No 348
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=90.46 E-value=0.94 Score=42.73 Aligned_cols=178 Identities=14% Similarity=0.092 Sum_probs=94.5
Q ss_pred HHHHHhCCcEEEeccHHHHhhhccCCCCCCC-CHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccE
Q 012478 103 KLVEKSGFSFCFTSGFSISAARLALPDTGFI-SYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAG 181 (462)
Q Consensus 103 rl~e~aGfdaI~vSG~avSas~lG~PD~g~v-sl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaG 181 (462)
+.++++|.+.+-+-= -|...+ .++.-...++.|.+.+++|+.++.=. -|+ .+-++.+.++||+|
T Consensus 24 ~~~~~~Gad~ihldi----------~DG~fvp~~~~g~~~v~~lr~~~~~~~~vhlmv--~dp---~~~i~~~~~aGadg 88 (230)
T 1tqj_A 24 KAVDEAGADWIHVDV----------MDGRFVPNITIGPLIVDAIRPLTKKTLDVHLMI--VEP---EKYVEDFAKAGADI 88 (230)
T ss_dssp HHHHHTTCSEEEEEE----------EBSSSSSCBCBCHHHHHHHGGGCCSEEEEEEES--SSG---GGTHHHHHHHTCSE
T ss_pred HHHHHcCCCEEEEEE----------EecCCCcchhhhHHHHHHHHhhcCCcEEEEEEc--cCH---HHHHHHHHHcCCCE
Confidence 456677998876542 132222 12222256677777677777666533 244 33467888999999
Q ss_pred EEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEE--ecchhhcccHHHHHHHHHHhHhcCCcEEEe
Q 012478 182 IILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA--RTDSRQALSLEESLRRSRAFADAGADVLFI 259 (462)
Q Consensus 182 I~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiA--RTDA~~~~gldeAI~RakAy~eAGAD~Ifi 259 (462)
|++=+...+ + ++..+-+++++.. |....+-. .|. .++.+++.+ |+|.|++
T Consensus 89 v~vh~e~~~--~-----------~~~~~~~~~i~~~----g~~~gv~~~p~t~----------~e~~~~~~~-~~D~v~~ 140 (230)
T 1tqj_A 89 ISVHVEHNA--S-----------PHLHRTLCQIREL----GKKAGAVLNPSTP----------LDFLEYVLP-VCDLILI 140 (230)
T ss_dssp EEEECSTTT--C-----------TTHHHHHHHHHHT----TCEEEEEECTTCC----------GGGGTTTGG-GCSEEEE
T ss_pred EEECccccc--c-----------hhHHHHHHHHHHc----CCcEEEEEeCCCc----------HHHHHHHHh-cCCEEEE
Confidence 977543000 0 1112233333322 22222222 121 224444444 8998865
Q ss_pred cCC-----------CCHHHHHHHHHhCC----CCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHHHHHHHHHHH
Q 012478 260 DAL-----------ASKEEMKAFCEISP----LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVSVRAMQDA 324 (462)
Q Consensus 260 e~~-----------~s~eei~~i~~~v~----~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~aa~~Am~~~ 324 (462)
-++ ...+.++++.+..+ .+|+. ..||-++ -+..++.+.|++.++.+..++.+.- ...+
T Consensus 141 msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~----v~GGI~~-~~~~~~~~aGad~vvvGSai~~a~d--~~~~ 213 (230)
T 1tqj_A 141 MSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIE----VDGGLKP-NNTWQVLEAGANAIVAGSAVFNAPN--YAEA 213 (230)
T ss_dssp ESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEE----EESSCCT-TTTHHHHHHTCCEEEESHHHHTSSC--HHHH
T ss_pred EEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEE----EECCcCH-HHHHHHHHcCCCEEEECHHHHCCCC--HHHH
Confidence 432 12455666655431 23322 2345554 5789999999999999988876411 3445
Q ss_pred HHHHHc
Q 012478 325 LTAIKG 330 (462)
Q Consensus 325 l~~l~~ 330 (462)
.+.|++
T Consensus 214 ~~~l~~ 219 (230)
T 1tqj_A 214 IAGVRN 219 (230)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 555543
No 349
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=90.39 E-value=0.82 Score=46.75 Aligned_cols=146 Identities=13% Similarity=0.139 Sum_probs=88.1
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCC-C--C----CCCCCCCcc---cCHHHHHHHHHHHHHHHHh
Q 012478 151 IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSP-K--G----CGHTRGRKV---VSREEAVMRIKAAVDARKE 220 (462)
Q Consensus 151 iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~P-K--r----CGH~~gk~L---vp~ee~~~kI~AA~~Ar~~ 220 (462)
+|+.+-. +..++..+.+.++++.+.|..++++.=+... + . .....+... -..++-+++|++++++.
T Consensus 143 v~~y~~~--~~~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~-- 218 (421)
T 4hnl_A 143 IPAYTHA--VADNLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKY-- 218 (421)
T ss_dssp EEEEEEE--EESSHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHH--
T ss_pred cceeccc--CCCCHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHh--
Confidence 6665432 2346788888999999999999998533210 0 0 000000000 12455677777777664
Q ss_pred hCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHH
Q 012478 221 SGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPL 297 (462)
Q Consensus 221 ~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~ 297 (462)
|+++.|. .|+-...+.++|++.++++++.+ ..|+|-+ .+.+.++++.+.++ +|+...-.. +-.....
T Consensus 219 -G~~~~l~--vDan~~~~~~~A~~~~~~l~~~~--i~~iEeP~~~~d~~~~~~l~~~~~-ipIa~dE~~----~~~~~~~ 288 (421)
T 4hnl_A 219 -GNQFQML--HDVHERLHPNQAIQFAKAAEPYQ--LFFLEDILPPDQSHWLTQLRSQSA-TPIATGELF----NNPMEWQ 288 (421)
T ss_dssp -TTSSEEE--EECTTCSCHHHHHHHHHHHGGGC--CSEEECCSCGGGGGGHHHHHTTCC-CCEEECTTC----CSGGGTH
T ss_pred -CCCceEe--ccccccCCHHHHHHHHHHhhhhh--hcccccCCcccchHHHHHHHhcCC-CCeecCcce----ehhHHHH
Confidence 6676553 47777788999999999999986 4567754 34567788887765 676543111 1112345
Q ss_pred HHHhcC-CCEEecc
Q 012478 298 ELEELG-FKLVAYP 310 (462)
Q Consensus 298 eL~~lG-v~~V~yp 310 (462)
++-+.| ++.+..-
T Consensus 289 ~~i~~~a~d~v~~d 302 (421)
T 4hnl_A 289 ELVKNRQIDFMRAH 302 (421)
T ss_dssp HHHHTTCCSEECCC
T ss_pred HHHhcCCceEEEeC
Confidence 555566 5555443
No 350
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=90.30 E-value=0.41 Score=48.72 Aligned_cols=90 Identities=14% Similarity=0.079 Sum_probs=59.0
Q ss_pred HHHHHHh-CCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCC
Q 012478 80 SLRQILE-LPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGD 158 (462)
Q Consensus 80 ~LR~ll~-~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~D 158 (462)
.++++.+ -+.++++.++...-.|+.++++|+|+|.+|+.+-. .-|.+..++ +.+..+.+.++.|||+|..
T Consensus 216 ~i~~i~~~~~~Pv~vkgv~t~e~a~~a~~aGad~I~vs~~gg~-----~~d~~~~~~----~~l~~v~~~~~~pVia~GG 286 (380)
T 1p4c_A 216 ALRWLRDLWPHKLLVKGLLSAEDADRCIAEGADGVILSNHGGR-----QLDCAISPM----EVLAQSVAKTGKPVLIDSG 286 (380)
T ss_dssp HHHHHHHHCCSEEEEEEECCHHHHHHHHHTTCSEEEECCGGGT-----SCTTCCCGG----GTHHHHHHHHCSCEEECSS
T ss_pred HHHHHHHhcCCCEEEEecCcHHHHHHHHHcCCCEEEEcCCCCC-----cCCCCcCHH----HHHHHHHHHcCCeEEEECC
Confidence 4444433 24578888999999999999999999999864311 123333332 2334455566789999854
Q ss_pred CCCCCHHHHHHHHHHHHHhCccEEEe
Q 012478 159 NGYGNAMNVKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 159 tGyG~~~nv~rtVk~l~~AGaaGI~I 184 (462)
- .+..++. ++..+||++|.|
T Consensus 287 I--~~~~dv~----kal~~GAdaV~i 306 (380)
T 1p4c_A 287 F--RRGSDIV----KALALGAEAVLL 306 (380)
T ss_dssp C--CSHHHHH----HHHHTTCSCEEE
T ss_pred C--CCHHHHH----HHHHhCCcHhhe
Confidence 3 3444555 344589999988
No 351
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=90.03 E-value=4.8 Score=38.92 Aligned_cols=138 Identities=17% Similarity=0.201 Sum_probs=84.2
Q ss_pred HHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHh
Q 012478 141 QGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKE 220 (462)
Q Consensus 141 ~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~ 220 (462)
..+.|++.+++||+.- |++ -++.+++ +...+||++|-|--. ..+.+ .++...+..++
T Consensus 92 dL~~ir~~v~lPvLrK-Dfi-~~~~qi~----ea~~~GAD~ilLi~a-------------~l~~~----~l~~l~~~a~~ 148 (251)
T 1i4n_A 92 FVRAARNLTCRPILAK-DFY-IDTVQVK----LASSVGADAILIIAR-------------ILTAE----QIKEIYEAAEE 148 (251)
T ss_dssp HHHHHHTTCCSCEEEE-CCC-CSTHHHH----HHHHTTCSEEEEEGG-------------GSCHH----HHHHHHHHHHT
T ss_pred HHHHHHHhCCCCEEEe-eCC-CCHHHHH----HHHHcCCCEEEEecc-------------cCCHH----HHHHHHHHHHH
Confidence 3456777889999953 344 2344444 455799999999432 23333 34444445555
Q ss_pred hCCCeEEEEecchhhcccHHHHHHHHHHhHhc-CCcEEEecCC------CCHHHHHHHHHhCCCCceeeeeeecCCCCCC
Q 012478 221 SGSDIVIVARTDSRQALSLEESLRRSRAFADA-GADVLFIDAL------ASKEEMKAFCEISPLVPKMANMLEGGGKTPI 293 (462)
Q Consensus 221 ~g~d~vIiARTDA~~~~gldeAI~RakAy~eA-GAD~Ifie~~------~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ 293 (462)
+|-+.++-..|. +| +.+..++ |+|+|-+.-. .+.+...++.+.+|. ...-+.++|=.+|
T Consensus 149 lGl~~lvEv~~~-------eE----~~~A~~l~g~~iIGinnr~l~t~~~d~~~~~~l~~~ip~--~~~vIaEsGI~t~- 214 (251)
T 1i4n_A 149 LGMDSLVEVHSR-------ED----LEKVFSVIRPKIIGINTRDLDTFEIKKNVLWELLPLVPD--DTVVVAESGIKDP- 214 (251)
T ss_dssp TTCEEEEEECSH-------HH----HHHHHTTCCCSEEEEECBCTTTCCBCTTHHHHHGGGSCT--TSEEEEESCCCCG-
T ss_pred cCCeEEEEeCCH-------HH----HHHHHhcCCCCEEEEeCcccccCCCCHHHHHHHHHhCCC--CCEEEEeCCCCCH-
Confidence 555555544432 22 5556678 9999988752 234566677776652 1222336533334
Q ss_pred CCHHHHHhcCCCEEeccchHHHH
Q 012478 294 LNPLELEELGFKLVAYPLSLIGV 316 (462)
Q Consensus 294 ls~~eL~~lGv~~V~yp~~ll~a 316 (462)
-+...+.++ +.-|+.|.+++++
T Consensus 215 edv~~~~~~-a~avLVG~aimr~ 236 (251)
T 1i4n_A 215 RELKDLRGK-VNAVLVGTSIMKA 236 (251)
T ss_dssp GGHHHHTTT-CSEEEECHHHHHC
T ss_pred HHHHHHHHh-CCEEEEcHHHcCC
Confidence 356788889 9999999998875
No 352
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=89.96 E-value=1.1 Score=45.24 Aligned_cols=125 Identities=11% Similarity=0.120 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCC--cccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 165 MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGR--KVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 165 ~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk--~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
+...+.++++.++|..+++|- +||..+- ..-+.++.+++|++++++. |+++.|. .|+.....++++
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik-------~g~~~~~~~~~~~~~~~~e~v~avR~~~---g~d~~l~--vDan~~~~~~~a 217 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIK-------VGRGGRHMPLWEGTKRDIAIVRGISEVA---GPAGKIM--IDANNAYNLNLT 217 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEE-------CCHHHHTSCHHHHHHHHHHHHHHHHHHH---CTTCCEE--EECTTCCCHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEC-------cCcCcccCCccccHHHHHHHHHHHHHHh---CCCCeEE--EECCCCCCHHHH
Confidence 667778888889999999982 3431100 0013456678888887764 5666554 377667789999
Q ss_pred HHHHHHhHhcCCcEEEecCC--CCHHHHHHHHHh-----CCCCceeeeeeecCCCCCCCCHHHHHhcC-CCEEec
Q 012478 243 LRRSRAFADAGADVLFIDAL--ASKEEMKAFCEI-----SPLVPKMANMLEGGGKTPILNPLELEELG-FKLVAY 309 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~--~s~eei~~i~~~-----v~~vP~~~N~l~~~g~tP~ls~~eL~~lG-v~~V~y 309 (462)
++-++++.+.|. .|+|-+ .+.+.++++.+. .+ +|+...= .+-.-..+++-+.| ++.|..
T Consensus 218 i~~~~~l~~~~i--~~iE~P~~~d~~~~~~l~~~l~~~g~~-iPIa~dE-----~~~~~~~~~~i~~~~~d~v~i 284 (392)
T 3p3b_A 218 KEVLAALSDVNL--YWLEEAFHEDEALYEDLKEWLGQRGQN-VLIADGE-----GLASPHLIEWATRGRVDVLQY 284 (392)
T ss_dssp HHHHHHTTTSCE--EEEECSSSCCHHHHHHHHHHHHHHTCC-CEEEECC-----SSCCTTHHHHHHTTSCCEECC
T ss_pred HHHHHHHHhcCC--CEEecCCcccHHHHHHHHHhhccCCCC-ccEEecC-----CCCHHHHHHHHHcCCCCEEEe
Confidence 999999988764 467654 367788888887 54 6655321 11123567776667 666665
No 353
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=89.89 E-value=1.3 Score=43.80 Aligned_cols=92 Identities=20% Similarity=0.358 Sum_probs=60.2
Q ss_pred HHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeC
Q 012478 78 AKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDG 157 (462)
Q Consensus 78 a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~ 157 (462)
.+.++.+.+ .+..+++.+.+.-.|+.++++|+|+|.+.|.... ...| ...++ ..+..+.+.+++|||++.
T Consensus 114 ~~~~~~l~~-~g~~v~~~v~s~~~a~~a~~~GaD~i~v~g~~~G-G~~G----~~~~~----~ll~~i~~~~~iPviaaG 183 (326)
T 3bo9_A 114 TKYIRELKE-NGTKVIPVVASDSLARMVERAGADAVIAEGMESG-GHIG----EVTTF----VLVNKVSRSVNIPVIAAG 183 (326)
T ss_dssp HHHHHHHHH-TTCEEEEEESSHHHHHHHHHTTCSCEEEECTTSS-EECC----SSCHH----HHHHHHHHHCSSCEEEES
T ss_pred HHHHHHHHH-cCCcEEEEcCCHHHHHHHHHcCCCEEEEECCCCC-ccCC----CccHH----HHHHHHHHHcCCCEEEEC
Confidence 333444443 4566778888999999999999999999763211 1123 11222 344556667789999984
Q ss_pred CCCCCCHHHHHHHHHHHHHhCccEEEeC
Q 012478 158 DNGYGNAMNVKRTVKGYIKAGFAGIILE 185 (462)
Q Consensus 158 DtGyG~~~nv~rtVk~l~~AGaaGI~IE 185 (462)
|..+..++.+ +.++||+||.+=
T Consensus 184 --GI~~~~dv~~----al~~GA~gV~vG 205 (326)
T 3bo9_A 184 --GIADGRGMAA----AFALGAEAVQMG 205 (326)
T ss_dssp --SCCSHHHHHH----HHHHTCSEEEES
T ss_pred --CCCCHHHHHH----HHHhCCCEEEec
Confidence 4556666654 445799999983
No 354
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=89.64 E-value=5.6 Score=40.09 Aligned_cols=168 Identities=22% Similarity=0.196 Sum_probs=103.8
Q ss_pred EecccCChHHHHHH------HHhCCcEEEeccHHHHhhhccCCCC-CCCCHH---HHHHHHHHHHhhc-CCcEEEeC---
Q 012478 92 QGPACFDALSAKLV------EKSGFSFCFTSGFSISAARLALPDT-GFISYG---EMVDQGQLITQAV-SIPVIGDG--- 157 (462)
Q Consensus 92 v~p~ayDalSArl~------e~aGfdaI~vSG~avSas~lG~PD~-g~vsl~---Eml~~~~~I~ra~-~iPVIaD~--- 157 (462)
.|||+|=..--+++ .+.|.+++.+=|.- . . .|. +.-.++ =+...++.|.+.. ++-||.|.
T Consensus 54 SMPGv~r~sid~l~~~~~~~~~lGi~~v~LFgvp-~---~--Kd~~gs~A~~~~g~v~rair~iK~~~p~l~vitDvcLc 127 (328)
T 1w1z_A 54 SMPGSFRFTIDRAVEECKELYDLGIQGIDLFGIP-E---Q--KTEDGSEAYNDNGILQQAIRAIKKAVPELCIMTDVALD 127 (328)
T ss_dssp TEEEEEEEEHHHHHHHHHHHHHHTCCEEEEEECC-S---S--CCSSCGGGGCTTSHHHHHHHHHHHHSTTSEEEEEECST
T ss_pred CCCCeeEeCHHHHHHHHHHHHHCCCCEEEEECCC-C---C--CCccccccCCCCChHHHHHHHHHHHCCCeEEEEeeecc
Confidence 46777643333333 34699988876541 0 0 121 222222 2455667777665 47788884
Q ss_pred ---CCCC------C---CHHHHHHH---HHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhC
Q 012478 158 ---DNGY------G---NAMNVKRT---VKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESG 222 (462)
Q Consensus 158 ---DtGy------G---~~~nv~rt---Vk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g 222 (462)
++|+ | |...+... .-...+|||+-|-=-|- |+| ||.|++++.++.|
T Consensus 128 ~YT~HGHcGil~~g~V~ND~Tl~~L~k~Als~A~AGADiVAPSdM--------MDG-----------rV~aIR~aLd~~G 188 (328)
T 1w1z_A 128 PFTPFGHDGLVKDGIILNDETVEVLQKMAVSHAEAGADFVSPSDM--------MDG-----------RIGAIREALDETD 188 (328)
T ss_dssp TTSTTSCSSEESSSCEEHHHHHHHHHHHHHHHHHHTCSEEEECSC--------CTT-----------HHHHHHHHHHHTT
T ss_pred cCCCCCceeeccCCcCccHHHHHHHHHHHHHHHHcCCCeEecccc--------ccc-----------HHHHHHHHHHhCC
Confidence 3332 2 33333333 34456899998877664 443 6666666666544
Q ss_pred -CCeEEEEecchhh------------c--------------ccHHHHHHHHHHhHhcCCcEEEe-cCCCCHHHHHHHHHh
Q 012478 223 -SDIVIVARTDSRQ------------A--------------LSLEESLRRSRAFADAGADVLFI-DALASKEEMKAFCEI 274 (462)
Q Consensus 223 -~d~vIiARTDA~~------------~--------------~gldeAI~RakAy~eAGAD~Ifi-e~~~s~eei~~i~~~ 274 (462)
.+.-|.+-+--++ . ..-+||++.+..=.+-|||+|+| ++++-.+.++++.+.
T Consensus 189 ~~~v~ImsYsaKyASafYGPFRdAa~Sap~fGDrktYQmdpaN~~EAlrE~~~Di~EGAD~vMVKPal~YLDIir~vk~~ 268 (328)
T 1w1z_A 189 HSDVGILSYAAKYASSFYGPFRDALHSAPQFGDKSTYQMNPANTEEAMKEVELDIVEGADIVMVKPGLAYLDIVWRTKER 268 (328)
T ss_dssp CTTSEEEEEEEEBCCTTCHHHHHHTTCCCCCSCSTTTSBCTTCSHHHHHHHHHHHHHTCSEEEEESCGGGHHHHHHHHHH
T ss_pred CCCceeeehhHHHhhhccchHHHHhccCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCCEEEEcCCCchHHHHHHHHHh
Confidence 3567777653221 0 12489999999999999999999 889999999999988
Q ss_pred CCCCceeeeee
Q 012478 275 SPLVPKMANML 285 (462)
Q Consensus 275 v~~vP~~~N~l 285 (462)
+. +|+.+=.+
T Consensus 269 ~~-~P~aaYqV 278 (328)
T 1w1z_A 269 FD-VPVAIYHV 278 (328)
T ss_dssp HC-SCEEEEEC
T ss_pred cC-CCEEEEEc
Confidence 74 67654333
No 355
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=89.63 E-value=1.9 Score=42.08 Aligned_cols=118 Identities=20% Similarity=0.278 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHhhcCCcEEEeCCCCCCCH--H------HHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHH
Q 012478 136 GEMVDQGQLITQAVSIPVIGDGDNGYGNA--M------NVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEA 207 (462)
Q Consensus 136 ~Eml~~~~~I~ra~~iPVIaD~DtGyG~~--~------nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~ 207 (462)
.+.+..--.+++..++++.- |+. + .+.+-++...+.|...|-|-|+.. -+|.++.
T Consensus 54 ~~~l~eki~l~~~~gV~v~~------GGTl~E~~~~qg~~~~yl~~~k~lGf~~iEiS~G~i-----------~l~~~~~ 116 (251)
T 1qwg_A 54 RDVVKEKINYYKDWGIKVYP------GGTLFEYAYSKGKFDEFLNECEKLGFEAVEISDGSS-----------DISLEER 116 (251)
T ss_dssp HHHHHHHHHHHHTTTCEEEE------CHHHHHHHHHTTCHHHHHHHHHHHTCCEEEECCSSS-----------CCCHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEC------CcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcc-----------cCCHHHH
Confidence 34455555566777888753 332 1 233345666678999999988752 2566665
Q ss_pred HHHHHHHHHHHHhhCCCeEEE---Eecch--hhcccHHHHHHHHHHhHhcCCcEEEecCCC--------------CHHHH
Q 012478 208 VMRIKAAVDARKESGSDIVIV---ARTDS--RQALSLEESLRRSRAFADAGADVLFIDALA--------------SKEEM 268 (462)
Q Consensus 208 ~~kI~AA~~Ar~~~g~d~vIi---ARTDA--~~~~gldeAI~RakAy~eAGAD~Ifie~~~--------------s~eei 268 (462)
+.-|+.+++. +|.++ +.-|. ....+.++.|+++++..+||||.|++|+-. ..+++
T Consensus 117 ~~~I~~~~~~------G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeAGA~~ViiEarEsG~~iGi~~~~g~~r~d~v 190 (251)
T 1qwg_A 117 NNAIKRAKDN------GFMVLTEVGKKMPDKDKQLTIDDRIKLINFDLDAGADYVIIEGRESGKGKGLFDKEGKVKENEL 190 (251)
T ss_dssp HHHHHHHHHT------TCEEEEEECCSSHHHHTTCCHHHHHHHHHHHHHHTCSEEEECCTTTCCSSTTBCTTSCBCHHHH
T ss_pred HHHHHHHHHC------CCEEeeeccccCCcccCCCCHHHHHHHHHHHHHCCCcEEEEeeecccCCcccCCCCCCCcHHHH
Confidence 5555544433 46554 34444 334578999999999999999999999852 24788
Q ss_pred HHHHHhCC
Q 012478 269 KAFCEISP 276 (462)
Q Consensus 269 ~~i~~~v~ 276 (462)
.++.+.++
T Consensus 191 ~~i~~~l~ 198 (251)
T 1qwg_A 191 DVLAKNVD 198 (251)
T ss_dssp HHHHTTSC
T ss_pred HHHHHhCC
Confidence 88888775
No 356
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=89.55 E-value=1.5 Score=42.21 Aligned_cols=91 Identities=24% Similarity=0.192 Sum_probs=55.1
Q ss_pred CCceEe---cccCChHH-HHHHHHhCCcEEEeccHHHHhhhcc---CC-----CC---CCCCHHHHHHHHHHHHhhcCCc
Q 012478 88 PGVHQG---PACFDALS-AKLVEKSGFSFCFTSGFSISAARLA---LP-----DT---GFISYGEMVDQGQLITQAVSIP 152 (462)
Q Consensus 88 ~~~iv~---p~ayDalS-Arl~e~aGfdaI~vSG~avSas~lG---~P-----D~---g~vsl~Eml~~~~~I~ra~~iP 152 (462)
+-++.+ |+..|... |+.++++|+|+|-+++........+ .| +. +.......++.++.+.+.+++|
T Consensus 164 ~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~ip 243 (311)
T 1ep3_A 164 KVPLYVKLSPNVTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIP 243 (311)
T ss_dssp SSCEEEEECSCSSCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSC
T ss_pred CCCEEEEECCChHHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCCC
Confidence 445543 57777655 8999999999999975321100000 00 00 1111112356677788888999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012478 153 VIGDGDNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 153 VIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~I 184 (462)
||+.. |..+..++. ++.++||++|.+
T Consensus 244 via~G--GI~~~~d~~----~~l~~GAd~V~v 269 (311)
T 1ep3_A 244 IIGMG--GVANAQDVL----EMYMAGASAVAV 269 (311)
T ss_dssp EEECS--SCCSHHHHH----HHHHHTCSEEEE
T ss_pred EEEEC--CcCCHHHHH----HHHHcCCCEEEE
Confidence 99873 455665554 445689999998
No 357
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=89.55 E-value=4.2 Score=39.96 Aligned_cols=103 Identities=21% Similarity=0.243 Sum_probs=62.0
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHH
Q 012478 161 YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (462)
Q Consensus 161 yG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gld 240 (462)
|.+...+.+.++++++.||+-|-|-.+.. -+|-.-++.+|-.+|+.-++++-.+. .++.|-- |....
T Consensus 34 ~~~~~~a~~~a~~~v~~GAdiIDIGgest------rPga~~v~~~eE~~rv~pvi~~l~~~-~~~piSI--DT~~~---- 100 (282)
T 1aj0_A 34 HNSLIDAVKHANLMINAGATIIDVGGEST------RPGAAEVSVEEELQRVIPVVEAIAQR-FEVWISV--DTSKP---- 100 (282)
T ss_dssp CTHHHHHHHHHHHHHHHTCSEEEEESSCC------STTCCCCCHHHHHHHHHHHHHHHHHH-CCCEEEE--ECCCH----
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCcC------CCCCCcCCHHHHHHHHHHHHHHHHhh-cCCeEEE--eCCCH----
Confidence 44567788889999999999999966431 12334566666667777666665432 2454443 33322
Q ss_pred HHHHHHHHhHhcCCcEEE-ecCCCCHHHHHHHHHhCCCCcee
Q 012478 241 ESLRRSRAFADAGADVLF-IDALASKEEMKAFCEISPLVPKM 281 (462)
Q Consensus 241 eAI~RakAy~eAGAD~If-ie~~~s~eei~~i~~~v~~vP~~ 281 (462)
+ -+++..++|||+|- +.+..+ +++..+++... +|..
T Consensus 101 ~---va~aAl~aGa~iINdvsg~~d-~~~~~~~a~~~-~~vV 137 (282)
T 1aj0_A 101 E---VIRESAKVGAHIINDIRSLSE-PGALEAAAETG-LPVC 137 (282)
T ss_dssp H---HHHHHHHTTCCEEEETTTTCS-TTHHHHHHHHT-CCEE
T ss_pred H---HHHHHHHcCCCEEEECCCCCC-HHHHHHHHHhC-CeEE
Confidence 2 24444556999996 344444 45666666553 4543
No 358
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=89.52 E-value=2.2 Score=42.87 Aligned_cols=103 Identities=16% Similarity=0.122 Sum_probs=55.8
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHH
Q 012478 161 YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (462)
Q Consensus 161 yG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gld 240 (462)
|.+...+.+.++++++.||+-|=|-.+.. -.| +-++.+|-++|+.-++++-.+.-+++.|-- |....
T Consensus 61 ~~~~~~a~~~A~~~v~~GAdIIDIGgeST------rPG-~~v~~~eEl~Rv~pvI~~l~~~~~~vpISI--DT~~~---- 127 (318)
T 2vp8_A 61 TFSDAAARDAVHRAVADGADVIDVGGVKA------GPG-ERVDVDTEITRLVPFIEWLRGAYPDQLISV--DTWRA---- 127 (318)
T ss_dssp ---CHHHHHHHHHHHHTTCSEEEEC-----------------CHHHHHHHHHHHHHHHHHHSTTCEEEE--ECSCH----
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCcC------CCC-CCCCHHHHHHHHHHHHHHHHhhCCCCeEEE--eCCCH----
Confidence 33456777788999999999998865431 134 567877777887666655433212554433 33322
Q ss_pred HHHHHHHHhHhcCCcEEE-ecCCCCHHHHHHHHHhCCCCcee
Q 012478 241 ESLRRSRAFADAGADVLF-IDALASKEEMKAFCEISPLVPKM 281 (462)
Q Consensus 241 eAI~RakAy~eAGAD~If-ie~~~s~eei~~i~~~v~~vP~~ 281 (462)
+. +++..++|||+|- +.+..+ +++..+++... +|..
T Consensus 128 ~V---aeaAl~aGa~iINDVsg~~d-~~m~~vaa~~g-~~vV 164 (318)
T 2vp8_A 128 QV---AKAACAAGADLINDTWGGVD-PAMPEVAAEFG-AGLV 164 (318)
T ss_dssp HH---HHHHHHHTCCEEEETTSSSS-TTHHHHHHHHT-CEEE
T ss_pred HH---HHHHHHhCCCEEEECCCCCc-hHHHHHHHHhC-CCEE
Confidence 22 3344456999886 445444 46666666654 4543
No 359
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=89.52 E-value=1.9 Score=43.30 Aligned_cols=128 Identities=15% Similarity=0.162 Sum_probs=86.5
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhC-CCeEEEEecchhhccc
Q 012478 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESG-SDIVIVARTDSRQALS 238 (462)
Q Consensus 160 GyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g-~d~vIiARTDA~~~~g 238 (462)
|+++++...+.++++.+.|...+||- .|. .+.++-+++|++++++. | +++.| |-|+-....
T Consensus 159 ~~~~~e~~~~~a~~~~~~G~~~~K~K-------vg~------~~~~~d~~~v~avr~~~---g~~~~~l--~vDaN~~~~ 220 (377)
T 2pge_A 159 WMGEAAFMQEQIEAKLAEGYGCLKLK-------IGA------IDFDKECALLAGIRESF---SPQQLEI--RVDANGAFS 220 (377)
T ss_dssp CCCCHHHHHHHHHHHHHTTCSEEEEE-------C---------CHHHHHHHHHHHHHHS---CTTTCEE--EEECTTBBC
T ss_pred cCCCHHHHHHHHHHHHHHhhhhheee-------cCC------CChHHHHHHHHHHHHHc---CCCCceE--EEECCCCCC
Confidence 45678777788888889999999983 221 14577788999888764 5 56544 468777778
Q ss_pred HHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCC--HHHHHhcC-CCEEeccch
Q 012478 239 LEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILN--PLELEELG-FKLVAYPLS 312 (462)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls--~~eL~~lG-v~~V~yp~~ 312 (462)
+++|++.++++.+.+ ..|+|-+ .+.+.++++++..+ +|+...=... +. .. ..++-+.| ++.+..=..
T Consensus 221 ~~~a~~~~~~l~~~~--i~~iEqP~~~~d~~~~~~l~~~~~-ipIa~dE~~~---~~-~~~~~~~~i~~~a~d~i~ik~~ 293 (377)
T 2pge_A 221 PANAPQRLKRLSQFH--LHSIEQPIRQHQWSEMAALCANSP-LAIALDEELI---GL-GAEQRSAMLDAIRPQYIILKPS 293 (377)
T ss_dssp TTTHHHHHHHHHTTC--CSEEECCBCSSCHHHHHHHHHHCS-SCEEESGGGT---TC-CTHHHHHHHHHHCCSEEEECHH
T ss_pred HHHHHHHHHHHhcCC--CcEEEccCCcccHHHHHHHHhhCC-CcEEECCccC---Cc-chHHHHHHHHhCCCCEEEECch
Confidence 899999999998875 5578765 47788999998875 6766542221 11 13 33554444 666665343
No 360
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=89.45 E-value=7.7 Score=37.97 Aligned_cols=150 Identities=19% Similarity=0.145 Sum_probs=90.7
Q ss_pred HHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhc-CCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012478 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV-SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (462)
Q Consensus 102 Arl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~-~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaa 180 (462)
++.+.++||+.|=+++... .| .+ .+.++.+.+.. +..+.+=.. .....+.+.++.+..+|+.
T Consensus 33 ~~~L~~~Gv~~IE~g~p~~------~~-------~d-~e~v~~i~~~~~~~~i~~l~~---~~~~di~~a~~~~~~ag~~ 95 (293)
T 3ewb_X 33 ALQLEKLGIDVIEAGFPIS------SP-------GD-FECVKAIAKAIKHCSVTGLAR---CVEGDIDRAEEALKDAVSP 95 (293)
T ss_dssp HHHHHHHTCSEEEEECGGG------CH-------HH-HHHHHHHHHHCCSSEEEEEEE---SSHHHHHHHHHHHTTCSSE
T ss_pred HHHHHHcCCCEEEEeCCCC------Cc-------cH-HHHHHHHHHhcCCCEEEEEec---CCHHHHHHHHHHHhhcCCC
Confidence 4566789999998775321 12 11 12344444432 233332222 2344566666666678999
Q ss_pred EEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEec
Q 012478 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFID 260 (462)
Q Consensus 181 GI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie 260 (462)
-|+|-+.+++- |...+-=.+.+|.+++++.+++..++.|..+.+.. .|+ ...+.+..++-++++.++|||.|.+.
T Consensus 96 ~v~i~~~~Sd~---~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~-~d~-~~~~~~~~~~~~~~~~~~G~~~i~l~ 170 (293)
T 3ewb_X 96 QIHIFLATSDV---HMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSP-EDA-TRSDRAFLIEAVQTAIDAGATVINIP 170 (293)
T ss_dssp EEEEEEECSHH---HHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEE-ETG-GGSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEecCcHH---HHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEe-ccC-CCCCHHHHHHHHHHHHHcCCCEEEec
Confidence 99987766431 21111123678999999988887776654443322 232 23467888899999999999999875
Q ss_pred ---CCCCHHHHHHHHH
Q 012478 261 ---ALASKEEMKAFCE 273 (462)
Q Consensus 261 ---~~~s~eei~~i~~ 273 (462)
|.-+++++.++.+
T Consensus 171 DT~G~~~P~~v~~lv~ 186 (293)
T 3ewb_X 171 DTVGYTNPTEFGQLFQ 186 (293)
T ss_dssp CSSSCCCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHH
Confidence 3456666666554
No 361
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=89.43 E-value=3.7 Score=40.54 Aligned_cols=101 Identities=11% Similarity=0.077 Sum_probs=73.7
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
++..+.+.++.+.+.|...+||-- |. -+.++-+++|++++++. |+++.+ |.|+-.....++|
T Consensus 116 ~~e~~~~~a~~~~~~G~~~~KiKv-------g~------~~~~~d~~~v~avr~~~---g~~~~L--~vDaN~~~~~~~A 177 (332)
T 2ozt_A 116 SGQAALEQWQQSWQRGQTTFKWKV-------GV------MSPEEEQAILKALLAAL---PPGAKL--RLDANGSWDRATA 177 (332)
T ss_dssp TGGGHHHHHHHHHHTTCCEEEEEC-------SS------SCHHHHHHHHHHHHHHS---CTTCEE--EEECTTCCCHHHH
T ss_pred ChHHHHHHHHHHHHcCCcEEEEEe-------CC------CChHHHHHHHHHHHHHc---CCCCEE--EEcccCCCCHHHH
Confidence 455667778888889999999832 21 13456678888887763 556543 4488777889999
Q ss_pred HHHHHHhHhc-CCcEEEecCC---CCHHHHHHHHHhCCCCceee
Q 012478 243 LRRSRAFADA-GADVLFIDAL---ASKEEMKAFCEISPLVPKMA 282 (462)
Q Consensus 243 I~RakAy~eA-GAD~Ifie~~---~s~eei~~i~~~v~~vP~~~ 282 (462)
++.++++.+. +.+..|+|-+ .+.+.++++.+..+ +|+..
T Consensus 178 ~~~~~~l~~~~~~~i~~iEqP~~~~d~~~~~~l~~~~~-ipIa~ 220 (332)
T 2ozt_A 178 NRWFAWLDRHGNGKIEYVEQPLPPDQWQALLSLAQTVT-TAIAL 220 (332)
T ss_dssp HHHHHHHHHHCCTTEEEEECCSCTTCHHHHHHHHHHCS-SCEEE
T ss_pred HHHHHHHHhhccCCcceeECCCCCCCHHHHHHHHHhCC-CCEEe
Confidence 9999999886 5578899876 36778888988765 67653
No 362
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=89.35 E-value=5.1 Score=41.02 Aligned_cols=145 Identities=21% Similarity=0.216 Sum_probs=94.2
Q ss_pred HHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEE
Q 012478 103 KLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGI 182 (462)
Q Consensus 103 rl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI 182 (462)
+-++++|+|.+=+ +.|| .+-.+....|.+.+++||++|.-+=| +.+...+++|++.+
T Consensus 53 ~~l~~aG~diVRv----------avp~------~~~a~al~~I~~~~~vPlvaDiHf~~-------~lal~a~e~G~dkl 109 (366)
T 3noy_A 53 KRLYEAGCEIVRV----------AVPH------KEDVEALEEIVKKSPMPVIADIHFAP-------SYAFLSMEKGVHGI 109 (366)
T ss_dssp HHHHHTTCCEEEE----------ECCS------HHHHHHHHHHHHHCSSCEEEECCSCH-------HHHHHHHHTTCSEE
T ss_pred HHHHHcCCCEEEe----------CCCC------hHHHHHHHHHHhcCCCCEEEeCCCCH-------HHHHHHHHhCCCeE
Confidence 3456789998765 3443 22256777888889999999976642 22334568999999
Q ss_pred EeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhh------------cccHHHHHHHHHHhH
Q 012478 183 ILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQ------------ALSLEESLRRSRAFA 250 (462)
Q Consensus 183 ~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~------------~~gldeAI~RakAy~ 250 (462)
-|.-+ ..+ + -+|+++.++++++.|..+.|-...-++. ..-++.|++-++.++
T Consensus 110 RINPG-------Nig-----~----~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e 173 (366)
T 3noy_A 110 RINPG-------NIG-----K----EEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFE 173 (366)
T ss_dssp EECHH-------HHS-----C----HHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred EECCc-------ccC-----c----hhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 99665 222 1 2356666666665566666654433321 113577899999999
Q ss_pred hcCCcEEEecCCCC-----HHHHHHHHHhCCCCceeeeeeec
Q 012478 251 DAGADVLFIDALAS-----KEEMKAFCEISPLVPKMANMLEG 287 (462)
Q Consensus 251 eAGAD~Ifie~~~s-----~eei~~i~~~v~~vP~~~N~l~~ 287 (462)
+.|-+-|.+....| .+..+.+++..+ .|+-+.+.+.
T Consensus 174 ~~gf~~iviS~K~S~v~~~i~ayr~la~~~d-yPLHlGvTEA 214 (366)
T 3noy_A 174 KWGFTNYKVSIKGSDVLQNVRANLIFAERTD-VPLHIGITEA 214 (366)
T ss_dssp HTTCCCEEEEEECSSHHHHHHHHHHHHHHCC-CCEEECCSSC
T ss_pred hCCCCeEEEeeecCChHHHHHHHHHHHhccC-CCEEEccCCC
Confidence 99998777755433 345556666654 7888877775
No 363
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=89.33 E-value=0.9 Score=44.94 Aligned_cols=96 Identities=15% Similarity=0.158 Sum_probs=56.6
Q ss_pred HHHHHHHhCCCceEeccc---CChHHHHHHHHhCCcEEEeccHHHH--hh----hc------cC-CCCCCCCHHHHHHHH
Q 012478 79 KSLRQILELPGVHQGPAC---FDALSAKLVEKSGFSFCFTSGFSIS--AA----RL------AL-PDTGFISYGEMVDQG 142 (462)
Q Consensus 79 ~~LR~ll~~~~~iv~p~a---yDalSArl~e~aGfdaI~vSG~avS--as----~l------G~-PD~g~vsl~Eml~~~ 142 (462)
+.++++.+-+.++.+-++ ++.-.|+.++++|+|+|.+|+.+-. +. .. ++ -|.+ ++.-+++
T Consensus 172 ~~i~~vr~~~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g-~~~~~~l--- 247 (332)
T 1vcf_A 172 ERLAELLPLPFPVMVKEVGHGLSREAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIG-IPTARAI--- 247 (332)
T ss_dssp HHHHHHCSCSSCEEEECSSSCCCHHHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCS-CBHHHHH---
T ss_pred HHHHHHHcCCCCEEEEecCCCCCHHHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhcc-ccHHHHH---
Confidence 334444432446665556 7888899999999999999853210 00 10 00 1222 3333333
Q ss_pred HHHHhhc-CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012478 143 QLITQAV-SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 143 ~~I~ra~-~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~I 184 (462)
..+.+.+ ++|||+|. |.-+..++. + +..+||++|.|
T Consensus 248 ~~v~~~~~~ipvia~G--GI~~~~d~~---k-al~~GAd~V~i 284 (332)
T 1vcf_A 248 LEVREVLPHLPLVASG--GVYTGTDGA---K-ALALGADLLAV 284 (332)
T ss_dssp HHHHHHCSSSCEEEES--SCCSHHHHH---H-HHHHTCSEEEE
T ss_pred HHHHHhcCCCeEEEEC--CCCCHHHHH---H-HHHhCCChHhh
Confidence 4555566 69999994 333555555 3 33479999999
No 364
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=89.31 E-value=2.2 Score=43.41 Aligned_cols=109 Identities=13% Similarity=0.064 Sum_probs=75.7
Q ss_pred CCCHHHHHHHHHHHHhh---cCCcEEEeCCCCCC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHH
Q 012478 132 FISYGEMVDQGQLITQA---VSIPVIGDGDNGYG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEA 207 (462)
Q Consensus 132 ~vsl~Eml~~~~~I~ra---~~iPVIaD~DtGyG-~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~ 207 (462)
..|.+|.++.+..+++. ...-|..++++++- ++..+.+.++.++++||.-|.|-|.+ | +..+.++
T Consensus 120 ~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~r~~~~~~~~~~~~~~~~Ga~~i~l~DT~-----G------~~~P~~~ 188 (370)
T 3rmj_A 120 KMKPKQVIEAAVKAVKIAREYTDDVEFSCEDALRSEIDFLAEICGAVIEAGATTINIPDTV-----G------YSIPYKT 188 (370)
T ss_dssp CCCHHHHHHHHHHHHHHHTTTCSCEEEEEETGGGSCHHHHHHHHHHHHHHTCCEEEEECSS-----S------CCCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCEEEEecCCCCccCHHHHHHHHHHHHHcCCCEEEecCcc-----C------CcCHHHH
Confidence 36899999887766543 35678889988754 67889999999999999999999986 3 3345677
Q ss_pred HHHHHHHHHHHHhhC-CCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEE
Q 012478 208 VMRIKAAVDARKESG-SDIVIVARTDSRQALSLEESLRRSRAFADAGADVL 257 (462)
Q Consensus 208 ~~kI~AA~~Ar~~~g-~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~I 257 (462)
.+.|++.++.-...+ ..+=+-...|. .-|+.-+.+..+|||+.|
T Consensus 189 ~~lv~~l~~~~~~~~~~~l~~H~Hnd~------GlAvAN~laAv~aGa~~v 233 (370)
T 3rmj_A 189 EEFFRELIAKTPNGGKVVWSAHCHNDL------GLAVANSLAALKGGARQV 233 (370)
T ss_dssp HHHHHHHHHHSTTGGGSEEEEECBCTT------SCHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHhCCCcCceEEEEEeCCCC------ChHHHHHHHHHHhCCCEE
Confidence 777777766532100 12333333332 234667778889999975
No 365
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=89.30 E-value=2.1 Score=43.11 Aligned_cols=125 Identities=17% Similarity=0.229 Sum_probs=80.2
Q ss_pred CCCCHHHHHHHHHHHHH-hCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhccc
Q 012478 160 GYGNAMNVKRTVKGYIK-AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS 238 (462)
Q Consensus 160 GyG~~~nv~rtVk~l~~-AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~g 238 (462)
|.|++......++++.+ .|...+||- .|. -+.++-+++|++++++. |+++.| |.|+.....
T Consensus 144 ~~~~~~~~~~~~~~~~~~~G~~~~KiK-------vg~------~~~~~d~~~v~avR~a~---g~~~~l--~vDaN~~~~ 205 (381)
T 3fcp_A 144 ASGDTAKDIAEGEKLLAEGRHRAFKLK-------IGA------RELATDLRHTRAIVEAL---GDRASI--RVDVNQAWD 205 (381)
T ss_dssp CSSCHHHHHHHHHHHTC----CEEEEE-------CCS------SCHHHHHHHHHHHHHHT---CTTCEE--EEECTTCBC
T ss_pred cCCChHHHHHHHHHHHHhCCCCEEEEe-------cCC------CChHHHHHHHHHHHHHc---CCCCeE--EEECCCCCC
Confidence 44566655555555554 699999983 232 13466688999888774 556655 568888888
Q ss_pred HHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHH---HHhcC-CCEEeccc
Q 012478 239 LEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELG-FKLVAYPL 311 (462)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~e---L~~lG-v~~V~yp~ 311 (462)
.++|++.++++.+.|.. |+|-+ .+.+.++++.+..+ +|+..+ .. ..+..+ +-+.| ++.+..-.
T Consensus 206 ~~~A~~~~~~l~~~~i~--~iEeP~~~~d~~~~~~l~~~~~-ipIa~d-----E~--~~~~~~~~~~~~~~a~d~v~~k~ 275 (381)
T 3fcp_A 206 AATGAKGCRELAAMGVD--LIEQPVSAHDNAALVRLSQQIE-TAILAD-----EA--VATAYDGYQLAQQGFTGAYALKI 275 (381)
T ss_dssp HHHHHHHHHHHHHTTCS--EEECCBCTTCHHHHHHHHHHSS-SEEEES-----TT--CCSHHHHHHHHHTTCCSEEEECH
T ss_pred HHHHHHHHHHHhhcCcc--ceeCCCCcccHHHHHHHHHhCC-CCEEEC-----CC--cCCHHHHHHHHHcCCCCEEEecc
Confidence 99999999999998754 66654 36788999998875 676543 11 234444 44444 66665544
Q ss_pred h
Q 012478 312 S 312 (462)
Q Consensus 312 ~ 312 (462)
.
T Consensus 276 ~ 276 (381)
T 3fcp_A 276 A 276 (381)
T ss_dssp H
T ss_pred c
Confidence 3
No 366
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=89.24 E-value=1.4 Score=40.75 Aligned_cols=80 Identities=19% Similarity=0.170 Sum_probs=53.4
Q ss_pred CceEecccCChHHHHHHHHhCCcEE--EeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHH
Q 012478 89 GVHQGPACFDALSAKLVEKSGFSFC--FTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMN 166 (462)
Q Consensus 89 ~~iv~p~ayDalSArl~e~aGfdaI--~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~n 166 (462)
+..++.++++.-.++.++++|+|.| .+.|..- ...+. .... +..++.+.+. ++||+++. |-.+..+
T Consensus 133 ~~~v~~~~~t~~ea~~a~~~Gad~i~~~v~g~~~--~~~~~---~~~~----~~~i~~~~~~-~ipvia~G--GI~s~~~ 200 (234)
T 1yxy_A 133 NQLLMADISTFDEGLVAHQAGIDFVGTTLSGYTP--YSRQE---AGPD----VALIEALCKA-GIAVIAEG--KIHSPEE 200 (234)
T ss_dssp TCEEEEECSSHHHHHHHHHTTCSEEECTTTTSST--TSCCS---SSCC----HHHHHHHHHT-TCCEEEES--CCCSHHH
T ss_pred CCeEEEeCCCHHHHHHHHHcCCCEEeeeccccCC--CCcCC---CCCC----HHHHHHHHhC-CCCEEEEC--CCCCHHH
Confidence 5678889999999999999999999 3444321 11111 1122 3445666666 89999984 4444544
Q ss_pred HHHHHHHHHHhCccEEEe
Q 012478 167 VKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 167 v~rtVk~l~~AGaaGI~I 184 (462)
+ +.+.++||+++.+
T Consensus 201 ~----~~~~~~Gad~v~v 214 (234)
T 1yxy_A 201 A----KKINDLGVAGIVV 214 (234)
T ss_dssp H----HHHHTTCCSEEEE
T ss_pred H----HHHHHCCCCEEEE
Confidence 4 4667789999988
No 367
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=89.21 E-value=1 Score=47.56 Aligned_cols=118 Identities=17% Similarity=0.283 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHH
Q 012478 166 NVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRR 245 (462)
Q Consensus 166 nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~R 245 (462)
...+.++.+.++|++.|.|-.. +||.. .+.+.|+.+++.- ++..|++-+-. . .+.
T Consensus 256 d~~era~aLveaGvd~I~Id~a-----~g~~~--------~v~~~i~~i~~~~----~~~~vi~g~v~----t----~e~ 310 (511)
T 3usb_A 256 DAMTRIDALVKASVDAIVLDTA-----HGHSQ--------GVIDKVKEVRAKY----PSLNIIAGNVA----T----AEA 310 (511)
T ss_dssp THHHHHHHHHHTTCSEEEEECS-----CTTSH--------HHHHHHHHHHHHC----TTSEEEEEEEC----S----HHH
T ss_pred chHHHHHHHHhhccceEEeccc-----ccchh--------hhhhHHHHHHHhC----CCceEEeeeec----c----HHH
Confidence 3456678889999999999543 45532 3344555444432 34444432211 1 345
Q ss_pred HHHhHhcCCcEEEec---------------CCCCHHHHHHH---HHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEE
Q 012478 246 SRAFADAGADVLFID---------------ALASKEEMKAF---CEISPLVPKMANMLEGGGKTPILNPLELEELGFKLV 307 (462)
Q Consensus 246 akAy~eAGAD~Ifie---------------~~~s~eei~~i---~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V 307 (462)
|+.+.++|||+|.+- +.++.+.+.++ ++.+. +|+++ .||-.-.-.....-++|..-|
T Consensus 311 a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~-iPVIa----~GGI~~~~di~kala~GA~~V 385 (511)
T 3usb_A 311 TKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHG-IPVIA----DGGIKYSGDMVKALAAGAHVV 385 (511)
T ss_dssp HHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTT-CCEEE----ESCCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCC-CcEEE----eCCCCCHHHHHHHHHhCchhh
Confidence 888899999999861 13334444444 44332 56543 234321123455567899999
Q ss_pred eccchH
Q 012478 308 AYPLSL 313 (462)
Q Consensus 308 ~yp~~l 313 (462)
..+..+
T Consensus 386 ~vGs~~ 391 (511)
T 3usb_A 386 MLGSMF 391 (511)
T ss_dssp EESTTT
T ss_pred eecHHH
Confidence 998764
No 368
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=89.18 E-value=4.3 Score=38.36 Aligned_cols=175 Identities=13% Similarity=0.025 Sum_probs=94.3
Q ss_pred HHHHHHhCCCceEecccCChH----HHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEE
Q 012478 80 SLRQILELPGVHQGPACFDAL----SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIG 155 (462)
Q Consensus 80 ~LR~ll~~~~~iv~p~ayDal----SArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIa 155 (462)
.+.+.+.+.+.+.+.-..|.- -++.+-+.|++.+-+.- .+ ... .+..+.+++... .+++
T Consensus 18 ~~~~~l~~~~ii~V~r~~~~~~~~~~~~al~~gGv~~iel~~----------k~---~~~---~~~i~~l~~~~~-~~~i 80 (225)
T 1mxs_A 18 RIDAICEKARILPVITIAREEDILPLADALAAGGIRTLEVTL----------RS---QHG---LKAIQVLREQRP-ELCV 80 (225)
T ss_dssp HHHHHHHHHSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEES----------SS---THH---HHHHHHHHHHCT-TSEE
T ss_pred HHHHHHHHCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEec----------CC---ccH---HHHHHHHHHhCc-ccEE
Confidence 344445444444444333443 23444566898887751 00 011 223455555542 2333
Q ss_pred eCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhh
Q 012478 156 DGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQ 235 (462)
Q Consensus 156 D~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~ 235 (462)
|+|... ....++..+++||++||.- |. . .+ +.++++..|.++++=+.|
T Consensus 81 ----gagtvl-~~d~~~~A~~aGAd~v~~p-~~--------d------~~--------v~~~~~~~g~~~i~G~~t---- 128 (225)
T 1mxs_A 81 ----GAGTVL-DRSMFAAVEAAGAQFVVTP-GI--------T------ED--------ILEAGVDSEIPLLPGIST---- 128 (225)
T ss_dssp ----EEECCC-SHHHHHHHHHHTCSSEECS-SC--------C------HH--------HHHHHHHCSSCEECEECS----
T ss_pred ----eeCeEe-eHHHHHHHHHCCCCEEEeC-CC--------C------HH--------HHHHHHHhCCCEEEeeCC----
Confidence 233321 2266778889999999862 21 1 11 122233346666553333
Q ss_pred cccHHHHHHHHHHhHhcCCcEEEecC---CCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHh-cCCCEEeccc
Q 012478 236 ALSLEESLRRSRAFADAGADVLFIDA---LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE-LGFKLVAYPL 311 (462)
Q Consensus 236 ~~gldeAI~RakAy~eAGAD~Ifie~---~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~-lGv~~V~yp~ 311 (462)
.+| +....++|||.|-+.- +-..+.++.+.+.+|.+|. +..||-++ -+..++.+ .|+..|. +.
T Consensus 129 ---~~e----~~~A~~~Gad~vk~FPa~~~~G~~~lk~i~~~~~~ipv----vaiGGI~~-~N~~~~l~~~Ga~~v~-gS 195 (225)
T 1mxs_A 129 ---PSE----IMMGYALGYRRFKLFPAEISGGVAAIKAFGGPFGDIRF----CPTGGVNP-ANVRNYMALPNVMCVG-TT 195 (225)
T ss_dssp ---HHH----HHHHHTTTCCEEEETTHHHHTHHHHHHHHHTTTTTCEE----EEBSSCCT-TTHHHHHHSTTBCCEE-EC
T ss_pred ---HHH----HHHHHHCCCCEEEEccCccccCHHHHHHHHhhCCCCeE----EEECCCCH-HHHHHHHhccCCEEEE-Ec
Confidence 233 4455689999885521 1124566777776654443 34456555 37899999 5999998 77
Q ss_pred hHHHH
Q 012478 312 SLIGV 316 (462)
Q Consensus 312 ~ll~a 316 (462)
.++.+
T Consensus 196 ai~~~ 200 (225)
T 1mxs_A 196 WMLDS 200 (225)
T ss_dssp TTSCH
T ss_pred hhcCc
Confidence 66654
No 369
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=89.14 E-value=6.4 Score=39.67 Aligned_cols=131 Identities=24% Similarity=0.269 Sum_probs=67.5
Q ss_pred HHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccE
Q 012478 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAG 181 (462)
Q Consensus 102 Arl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaG 181 (462)
++.++++|++++.+.+.... ..++.|.. ++.+ ++.+++.+++||++ -|-.+++ .++.+.++||++
T Consensus 171 a~~~~~agad~i~i~~~~~~-~~~~~~~~---~~~~----i~~l~~~~~~pvi~---ggi~t~e----~a~~~~~~Gad~ 235 (393)
T 2qr6_A 171 APIVIKAGADLLVIQGTLIS-AEHVNTGG---EALN----LKEFIGSLDVPVIA---GGVNDYT----TALHMMRTGAVG 235 (393)
T ss_dssp HHHHHHTTCSEEEEECSSCC-SSCCCC--------C----HHHHHHHCSSCEEE---ECCCSHH----HHHHHHTTTCSE
T ss_pred HHHHHHCCCCEEEEeCCccc-cccCCCcc---cHHH----HHHHHHhcCCCEEE---CCcCCHH----HHHHHHHcCCCE
Confidence 56667789999876532211 11222321 3333 34566667999999 1222333 356777899999
Q ss_pred EEeCCCCCCCCCCCCCCCc----ccCHHHHHHHHHHHH-HHHHhhCC-CeEEEEecchhhcccHHHHHHHHHHhHhcCCc
Q 012478 182 IILEDQVSPKGCGHTRGRK----VVSREEAVMRIKAAV-DARKESGS-DIVIVARTDSRQALSLEESLRRSRAFADAGAD 255 (462)
Q Consensus 182 I~IEDq~~PKrCGH~~gk~----Lvp~ee~~~kI~AA~-~Ar~~~g~-d~vIiARTDA~~~~gldeAI~RakAy~eAGAD 255 (462)
|.+ .. .||.+ +. -+|.-+.+..++.+. +...+.+. ++-|+|=-.-.. + + .+..+..+|||
T Consensus 236 i~v-g~-----Gg~~~-~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~--~-~----dv~kalalGA~ 301 (393)
T 2qr6_A 236 IIV-GG-----GENTN-SLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIEN--S-G----DVVKAIACGAD 301 (393)
T ss_dssp EEE-SC-----CSCCH-HHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCS--H-H----HHHHHHHHTCS
T ss_pred EEE-CC-----Ccccc-cccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCC--H-H----HHHHHHHcCCC
Confidence 999 32 23432 11 145555555544331 11111222 255665432221 1 1 24445558999
Q ss_pred EEEecC
Q 012478 256 VLFIDA 261 (462)
Q Consensus 256 ~Ifie~ 261 (462)
+|++-.
T Consensus 302 ~V~iG~ 307 (393)
T 2qr6_A 302 AVVLGS 307 (393)
T ss_dssp EEEECG
T ss_pred EEEECH
Confidence 999853
No 370
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=89.14 E-value=9.7 Score=38.33 Aligned_cols=126 Identities=19% Similarity=0.205 Sum_probs=82.4
Q ss_pred CCCCHHHHHHHHHHHHH-hCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhccc
Q 012478 160 GYGNAMNVKRTVKGYIK-AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS 238 (462)
Q Consensus 160 GyG~~~nv~rtVk~l~~-AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~g 238 (462)
|.|++......++++.+ .|...+||- .|. -+.++-+++|++++++. |+++.+ +.|+.....
T Consensus 145 ~~~~~~~~~~~~~~~~~~~G~~~~KiK-------vg~------~~~~~d~~~v~avR~a~---g~~~~l--~vDaN~~~~ 206 (382)
T 3dgb_A 145 ASGDTAKDIAEAQKMLDLRRHRIFKLK-------IGA------GEVDRDLAHVIAIKKAL---GDSASV--RVDVNQAWD 206 (382)
T ss_dssp CSSCHHHHHHHHHHHHHTTSCSEEEEE-------CCS------SCHHHHHHHHHHHHHHH---GGGSEE--EEECTTCBC
T ss_pred cCCChHHHHHHHHHHHHhCCCCEEEEe-------eCC------CCHHHHHHHHHHHHHHc---CCCCeE--EEeCCCCCC
Confidence 45677655555555555 699999993 232 13466688999888875 344443 348888888
Q ss_pred HHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHH---hcC-CCEEeccc
Q 012478 239 LEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE---ELG-FKLVAYPL 311 (462)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~---~lG-v~~V~yp~ 311 (462)
.++|++.++++.+.|. .|+|-+ .+.+.++++.+..+ +|+..+ .. ..+..++. +.| ++.+..-.
T Consensus 207 ~~~A~~~~~~l~~~~i--~~iEqP~~~~d~~~~~~l~~~~~-ipIa~d-----E~--~~~~~~~~~~~~~~~~d~v~~k~ 276 (382)
T 3dgb_A 207 EAVALRACRILGGNGI--DLIEQPISRNNRAGMVRLNASSP-APIMAD-----ES--IECVEDAFNLAREGAASVFALKI 276 (382)
T ss_dssp HHHHHHHHHHHHTTTC--CCEECCBCTTCHHHHHHHHHHCS-SCEEES-----TT--CSSHHHHHHHHHHTCCSEEEECH
T ss_pred HHHHHHHHHHHhhcCc--CeeeCCCCccCHHHHHHHHHhCC-CCEEeC-----CC--cCCHHHHHHHHHcCCCCEEEecc
Confidence 9999999999999875 466654 36788999998875 676543 11 23554444 334 66666544
Q ss_pred hH
Q 012478 312 SL 313 (462)
Q Consensus 312 ~l 313 (462)
.-
T Consensus 277 ~~ 278 (382)
T 3dgb_A 277 AK 278 (382)
T ss_dssp HH
T ss_pred cc
Confidence 43
No 371
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=89.10 E-value=0.92 Score=44.78 Aligned_cols=89 Identities=16% Similarity=0.225 Sum_probs=54.8
Q ss_pred HHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCC-CceeeeeeecCC
Q 012478 211 IKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPL-VPKMANMLEGGG 289 (462)
Q Consensus 211 I~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~-vP~~~N~l~~~g 289 (462)
|..++++.++..+...|..-.|. +++++...++|||.|+++.+ +.++++++++.+.. .|. +-+...||
T Consensus 181 i~~av~~ar~~~~~~~I~Vev~t---------~eea~eal~aGaD~I~LDn~-~~~~~~~~v~~l~~~~~~-v~ieaSGG 249 (284)
T 1qpo_A 181 VVDALRAVRNAAPDLPCEVEVDS---------LEQLDAVLPEKPELILLDNF-AVWQTQTAVQRRDSRAPT-VMLESSGG 249 (284)
T ss_dssp HHHHHHHHHHHCTTSCEEEEESS---------HHHHHHHGGGCCSEEEEETC-CHHHHHHHHHHHHHHCTT-CEEEEESS
T ss_pred HHHHHHHHHHhCCCCCEEEEeCC---------HHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCC-eEEEEECC
Confidence 34444443333343356655553 34566677799999999986 45777777765431 011 11222345
Q ss_pred CCCCCCHHHHHhcCCCEEeccc
Q 012478 290 KTPILNPLELEELGFKLVAYPL 311 (462)
Q Consensus 290 ~tP~ls~~eL~~lGv~~V~yp~ 311 (462)
-+| -+..++.+.|+..++.+.
T Consensus 250 It~-~~i~~~a~tGVD~isvG~ 270 (284)
T 1qpo_A 250 LSL-QTAATYAETGVDYLAVGA 270 (284)
T ss_dssp CCT-TTHHHHHHTTCSEEECGG
T ss_pred CCH-HHHHHHHhcCCCEEEECH
Confidence 554 488999999999999876
No 372
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=89.03 E-value=9.2 Score=38.69 Aligned_cols=170 Identities=16% Similarity=0.181 Sum_probs=102.4
Q ss_pred EecccCChHHHHHH------HHhCCcEEEeccHHHHhhhccCCCC-CCCCHH---HHHHHHHHHHhhc-CCcEEEeC---
Q 012478 92 QGPACFDALSAKLV------EKSGFSFCFTSGFSISAARLALPDT-GFISYG---EMVDQGQLITQAV-SIPVIGDG--- 157 (462)
Q Consensus 92 v~p~ayDalSArl~------e~aGfdaI~vSG~avSas~lG~PD~-g~vsl~---Eml~~~~~I~ra~-~iPVIaD~--- 157 (462)
.|||+|=..--+++ .+.|..++.+=|.--. . ..|. +.-.++ =+...++.|.+.. ++-||.|.
T Consensus 56 SMPGv~r~sid~l~~~~~~~~~lGi~~v~LFgv~~~--~--~KD~~gs~A~~~~g~v~rair~iK~~~pdl~vitDvcLc 131 (337)
T 1w5q_A 56 SMPGVERLSIDQLLIEAEEWVALGIPALALFPVTPV--E--KKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVCLC 131 (337)
T ss_dssp TSTTCEEEEHHHHHHHHHHHHHTTCCEEEEEECCCG--G--GCBSSCGGGGCTTSHHHHHHHHHHHHCTTSEEEEEECST
T ss_pred CCCCceeeCHHHHHHHHHHHHHCCCCEEEEecCCCc--c--cCCcccCccCCCCChHHHHHHHHHHHCCCeEEEEeeecc
Confidence 46776643333333 3469999887654100 0 1111 211222 2455667777665 47788884
Q ss_pred ---CC---------CCC-CHHHHHHH---HHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhh
Q 012478 158 ---DN---------GYG-NAMNVKRT---VKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKES 221 (462)
Q Consensus 158 ---Dt---------GyG-~~~nv~rt---Vk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~ 221 (462)
++ |+= |...+... .-.+.+|||+-|-=-|- |+| ||.|++++.++.
T Consensus 132 ~YT~HGHcGil~~~g~V~ND~Tl~~L~k~Als~A~AGADiVAPSdM--------MDG-----------rV~aIR~aLd~~ 192 (337)
T 1w5q_A 132 EFTTHGQCGILDDDGYVLNDVSIDVLVRQALSHAEAGAQVVAPSDM--------MDG-----------RIGAIREALESA 192 (337)
T ss_dssp TTBTTCCSSCBCTTSCBCHHHHHHHHHHHHHHHHHTTCSEEEECSC--------CTT-----------HHHHHHHHHHHT
T ss_pred cCCCCCcceeeCCCCcCccHHHHHHHHHHHHHHHHcCCCeEecccc--------ccc-----------HHHHHHHHHHHC
Confidence 22 322 33333333 34456899998877664 443 666666666554
Q ss_pred C-CCeEEEEecchhh-------------c---------------ccHHHHHHHHHHhHhcCCcEEEe-cCCCCHHHHHHH
Q 012478 222 G-SDIVIVARTDSRQ-------------A---------------LSLEESLRRSRAFADAGADVLFI-DALASKEEMKAF 271 (462)
Q Consensus 222 g-~d~vIiARTDA~~-------------~---------------~gldeAI~RakAy~eAGAD~Ifi-e~~~s~eei~~i 271 (462)
| .+.-|.+-+--++ + ..-+||++.+..=.+-|||+|+| ++++-.+.++++
T Consensus 193 G~~~v~ImsYsaKyASafYGPFRdAa~Sap~f~~GDrktYQmdpaN~~EAlrE~~~Di~EGAD~vMVKPal~YLDIir~v 272 (337)
T 1w5q_A 193 GHTNVRVMAYSAKYASAYYGPFRDAVGSASNLGKGNRATYQMDPANSDEALHEVAADLAEGADMVMVKPGMPYLDIVRRV 272 (337)
T ss_dssp TCTTCEEEEEEEEBCCGGGHHHHHC----------CGGGTSBCTTCSHHHHHHHHHHHHTTCSEEEEESCGGGHHHHHHH
T ss_pred CCCCceeehhHHHHHHHHHHHHHHHhcCCcccCCCCccccCCCCCChHHHHHHHHhhHHhCCCEEEEcCCCchHHHHHHH
Confidence 4 3567776543321 0 01378999999999999999999 889999999999
Q ss_pred HHhCCCCceeeeee
Q 012478 272 CEISPLVPKMANML 285 (462)
Q Consensus 272 ~~~v~~vP~~~N~l 285 (462)
.+.+. +|+.+=.+
T Consensus 273 k~~~~-~PvaaYqV 285 (337)
T 1w5q_A 273 KDEFR-APTFVYQV 285 (337)
T ss_dssp HHHHC-SCEEEEEC
T ss_pred HHhcC-CCEEEEEc
Confidence 98874 67754333
No 373
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=89.00 E-value=3.6 Score=40.45 Aligned_cols=102 Identities=23% Similarity=0.226 Sum_probs=65.7
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHH
Q 012478 161 YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (462)
Q Consensus 161 yG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gld 240 (462)
|.+...+.+.+++|++.||+-|=|-.+.. -+|-+.++.+|-.+|+.-+.++-.+ .+..|=- |.+..
T Consensus 26 ~~~~~~a~~~a~~m~~~GAdiIDIGgeST------RPga~~vs~eeE~~Rv~pvi~~l~~--~~v~iSI--DT~~~---- 91 (270)
T 4hb7_A 26 FNNVETAINRVKAMIDEGADIIDVGGVST------RPGHEMVTLEEELNRVLPVVEAIVG--FDVKISV--DTFRS---- 91 (270)
T ss_dssp -CHHHHHHHHHHHHHHTTCSEEEEESCCC------STTCCCCCHHHHHHHHHHHHHHHTT--SSSEEEE--ECSCH----
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCccC------CCCCCCCchHHHHHHHHHHHHHhhc--CCCeEEE--ECCCH----
Confidence 44556778888999999999999966542 2344568888888898888877653 3444332 33332
Q ss_pred HHHHHHHHhHhcCCcEEE-ecC-CCCHHHHHHHHHhCCCCcee
Q 012478 241 ESLRRSRAFADAGADVLF-IDA-LASKEEMKAFCEISPLVPKM 281 (462)
Q Consensus 241 eAI~RakAy~eAGAD~If-ie~-~~s~eei~~i~~~v~~vP~~ 281 (462)
+ =+++..++|||+|= |.+ ..++ ++..++.... +|..
T Consensus 92 ~---Va~~al~aGa~iINDVs~g~~d~-~m~~~va~~~-~~~v 129 (270)
T 4hb7_A 92 E---VAEACLKLGVDMINDQWAGLYDH-RMFQIVAKYD-AEII 129 (270)
T ss_dssp H---HHHHHHHHTCCEEEETTTTSSCT-HHHHHHHHTT-CEEE
T ss_pred H---HHHHHHHhccceeccccccccch-hHHHHHHHcC-CCeE
Confidence 1 24455679999885 443 4454 6666666654 4554
No 374
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=88.98 E-value=8.5 Score=35.93 Aligned_cols=174 Identities=17% Similarity=0.047 Sum_probs=97.9
Q ss_pred HHHHHhCCCceEecccCChHH----HHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEe
Q 012478 81 LRQILELPGVHQGPACFDALS----AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGD 156 (462)
Q Consensus 81 LR~ll~~~~~iv~p~ayDalS----Arl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD 156 (462)
+.+.+.+.+.+.+.-..|.-. ++.+-+.|++.+-+.- .+ .... +..+.+++... .+++.
T Consensus 9 ~~~~l~~~~~i~v~r~~~~~~~~~~~~al~~gGv~~iel~~----------k~---~~~~---~~i~~l~~~~~-~~~vg 71 (214)
T 1wbh_A 9 AESILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTL----------RT---ECAV---DAIRAIAKEVP-EAIVG 71 (214)
T ss_dssp HHHHHHSCSEEEEECCSSGGGHHHHHHHHHHTTCCEEEEES----------CS---TTHH---HHHHHHHHHCT-TSEEE
T ss_pred HHHHHHHCCEEEEEECCCHHHHHHHHHHHHHcCCCEEEEeC----------CC---hhHH---HHHHHHHHHCc-CCEEe
Confidence 445565565665555555543 3444456898887761 11 1112 24455555543 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhc
Q 012478 157 GDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA 236 (462)
Q Consensus 157 ~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~ 236 (462)
+.+ .=+ ...++..+++||++||.- |. . .+ +.++++..|.++++=..|
T Consensus 72 agt-vi~----~d~~~~A~~aGAd~v~~p-~~--------d------~~--------v~~~~~~~g~~~i~G~~t----- 118 (214)
T 1wbh_A 72 AGT-VLN----PQQLAEVTEAGAQFAISP-GL--------T------EP--------LLKAATEGTIPLIPGIST----- 118 (214)
T ss_dssp EES-CCS----HHHHHHHHHHTCSCEEES-SC--------C------HH--------HHHHHHHSSSCEEEEESS-----
T ss_pred eCE-EEE----HHHHHHHHHcCCCEEEcC-CC--------C------HH--------HHHHHHHhCCCEEEecCC-----
Confidence 323 222 256678889999999963 32 1 11 122233346666654333
Q ss_pred ccHHHHHHHHHHhHhcCCcEEEe-cCCC--CHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhc-CCCEEeccch
Q 012478 237 LSLEESLRRSRAFADAGADVLFI-DALA--SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEEL-GFKLVAYPLS 312 (462)
Q Consensus 237 ~gldeAI~RakAy~eAGAD~Ifi-e~~~--s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~l-Gv~~V~yp~~ 312 (462)
.+| +....++|||.|-+ ++-. ..+.++++.+.+|.+|. +..||-++ -+..++.+. |+.-|. +..
T Consensus 119 --~~e----~~~A~~~Gad~v~~Fpa~~~gG~~~lk~i~~~~~~ipv----vaiGGI~~-~n~~~~l~agg~~~v~-gS~ 186 (214)
T 1wbh_A 119 --VSE----LMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRF----CPTGGISP-ANYRDYLALKSVLCIG-GSW 186 (214)
T ss_dssp --HHH----HHHHHHTTCCEEEETTTTTTTHHHHHHHHHTTCTTCEE----EEBSSCCT-TTHHHHHTSTTBSCEE-EGG
T ss_pred --HHH----HHHHHHCCCCEEEEecCccccCHHHHHHHhhhCCCCeE----EEECCCCH-HHHHHHHhcCCCeEEE-ecc
Confidence 233 44456899998855 2222 25778888887765554 34456665 488999998 888887 666
Q ss_pred HHHH
Q 012478 313 LIGV 316 (462)
Q Consensus 313 ll~a 316 (462)
++.+
T Consensus 187 i~~~ 190 (214)
T 1wbh_A 187 LVPA 190 (214)
T ss_dssp GSCH
T ss_pred ccCh
Confidence 5543
No 375
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=88.97 E-value=12 Score=38.29 Aligned_cols=150 Identities=15% Similarity=0.107 Sum_probs=91.8
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCC--CCCCCCC-------C------CCCcccC----HHHHHHH
Q 012478 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQV--SPKGCGH-------T------RGRKVVS----REEAVMR 210 (462)
Q Consensus 150 ~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~--~PKrCGH-------~------~gk~Lvp----~ee~~~k 210 (462)
.+|+-+-. +..+++.+.+.++++.+.|..++||-=+. .+...|- . .+....+ .++.+++
T Consensus 138 ~v~~y~~~--~~~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~ 215 (424)
T 3v3w_A 138 RILSYTHA--NGKDLDSTLEAVRKAKDKGYKAIRVQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDV 215 (424)
T ss_dssp SEEEEEEE--EESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHH
T ss_pred ceeEEEeC--CCCCHHHHHHHHHHHHHcCCCEEEEeccCccccccccccccccccccccccccccccccchhHHHHHHHH
Confidence 36664422 22467888888999999999999984221 0000010 0 0000011 4566788
Q ss_pred HHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeec
Q 012478 211 IKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEG 287 (462)
Q Consensus 211 I~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~ 287 (462)
|+|++++. |+++.|.. |+.....+++|++-++++.+.|.+.| |-+ .+.+.++++.+.++ +|+..+-..
T Consensus 216 v~avR~av---G~d~~l~v--DaN~~~~~~~A~~~~~~L~~~~i~~i--EqP~~~~d~~~~~~l~~~~~-iPIa~dE~~- 286 (424)
T 3v3w_A 216 FAAVRKEF---GPDIHLLH--DVHHRLTPIEAARLGKALEPYHLFWM--EDAVPAENQESFKLIRQHTT-TPLAVGEVF- 286 (424)
T ss_dssp HHHHHHHH---CSSSEEEE--ECTTCCCHHHHHHHHHHHGGGCCSEE--ECCSCCSSTTHHHHHHHHCC-SCEEECTTC-
T ss_pred HHHHHHHc---CCCCcEEE--eCCCCCCHHHHHHHHHHHHhcCCCEE--ECCCChHhHHHHHHHHhhCC-CCEEEccCc-
Confidence 88887764 67776654 67677789999999999999987654 543 25678889988876 676543111
Q ss_pred CCCCCCCCHHHHHhcC-CCEEeccchH
Q 012478 288 GGKTPILNPLELEELG-FKLVAYPLSL 313 (462)
Q Consensus 288 ~g~tP~ls~~eL~~lG-v~~V~yp~~l 313 (462)
.+ .-..+++-+.| +..|..-..-
T Consensus 287 --~~-~~~~~~~i~~ga~d~v~~k~~~ 310 (424)
T 3v3w_A 287 --NS-IHDCRELIQNQWIDYIRTTIVH 310 (424)
T ss_dssp --CS-GGGTHHHHHTTCCSEECCCTTT
T ss_pred --CC-HHHHHHHHHcCCCCeEeecchh
Confidence 01 12345566666 6666654443
No 376
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=88.96 E-value=4 Score=41.96 Aligned_cols=148 Identities=15% Similarity=0.117 Sum_probs=90.7
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCC-------CCCCCCCCCCcccC----HHHHHHHHHHHHHHH
Q 012478 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVS-------PKGCGHTRGRKVVS----REEAVMRIKAAVDAR 218 (462)
Q Consensus 150 ~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~-------PKrCGH~~gk~Lvp----~ee~~~kI~AA~~Ar 218 (462)
.+|+-+-. +..+++.+.+.++++.+.|..++||-=+.. |..-++..|. ..+ .++.+++|+|++++.
T Consensus 143 ~v~~y~~~--~~~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~e~v~avR~av 219 (422)
T 3tji_A 143 AIPAYSHA--SGETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGA-WFDQQEYMSNTVEMFHALREKY 219 (422)
T ss_dssp CEEEEEEE--EESSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSE-ECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEe--CCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccc-cccchhHHHHHHHHHHHHHHHc
Confidence 36664422 224678888889999999999999842211 1011222221 122 345677777777664
Q ss_pred HhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCC---CHHHHHHHHHhCCCCceeeeeeecCCCCCCCC
Q 012478 219 KESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALA---SKEEMKAFCEISPLVPKMANMLEGGGKTPILN 295 (462)
Q Consensus 219 ~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~---s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls 295 (462)
|+++.|.. |+......++|++-++++.+.|.+ |+|-+- +.+.++++.+.++ +|+.++=.. .+ .-.
T Consensus 220 ---G~d~~L~v--DaN~~~~~~~A~~~~~~Le~~~i~--~iEqP~~~~d~~~~~~l~~~~~-iPIa~dE~~---~~-~~~ 287 (422)
T 3tji_A 220 ---GWKLHILH--DVHERLFPQQAVQLAKQLEPFQPY--FIEDILPPQQSAWLEQVRQQSC-VPLALGELF---NN-PAE 287 (422)
T ss_dssp ---CSSSEEEE--ECTTCSCHHHHHHHHHHHGGGCCS--EEECCSCGGGGGGHHHHHHHCC-CCEEECTTC---CS-GGG
T ss_pred ---CCCCEEEE--ECCCCCCHHHHHHHHHHHHhhCCC--eEECCCChhhHHHHHHHHhhCC-CCEEEeCCc---CC-HHH
Confidence 67776654 666777899999999999999866 555442 4567888888875 676543111 01 123
Q ss_pred HHHHHhcC-CCEEeccch
Q 012478 296 PLELEELG-FKLVAYPLS 312 (462)
Q Consensus 296 ~~eL~~lG-v~~V~yp~~ 312 (462)
.+++-+.| ++.|..-..
T Consensus 288 ~~~ll~~ga~d~v~~k~~ 305 (422)
T 3tji_A 288 WHDLIVNRRIDFIRCHVS 305 (422)
T ss_dssp THHHHHTTCCSEECCCGG
T ss_pred HHHHHhcCCCCEEecCcc
Confidence 45566666 666665444
No 377
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=88.96 E-value=4.8 Score=38.53 Aligned_cols=111 Identities=14% Similarity=0.138 Sum_probs=60.2
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcc-----------cCHHHHHHHHHHHHHHH
Q 012478 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKV-----------VSREEAVMRIKAAVDAR 218 (462)
Q Consensus 150 ~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~L-----------vp~ee~~~kI~AA~~Ar 218 (462)
-+|.|. .||-+.....+.++.+.++|+++|.| +-.+ .-...+|..+ +..+...+-+++.++.
T Consensus 19 ~i~~i~---~g~p~~~~~~~~~~~l~~~G~D~IEl-G~P~--sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~- 91 (262)
T 2ekc_A 19 LVSYLM---VGYPDYETSLKAFKEVLKNGTDILEI-GFPF--SDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKE- 91 (262)
T ss_dssp EEEEEE---TTSSCHHHHHHHHHHHHHTTCSEEEE-ECCC--SCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-
T ss_pred EEEEec---CCCCChHHHHHHHHHHHHcCCCEEEE-CCCC--CCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhh-
Confidence 366663 67777777888899999999999998 2211 0001122111 1112222223333322
Q ss_pred Hhh-CCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHH
Q 012478 219 KES-GSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCE 273 (462)
Q Consensus 219 ~~~-g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~ 273 (462)
. +.+++++.-.+-....+++..+ +...++|+|.+.++.++. +++..+.+
T Consensus 92 --~~~~Pi~~m~y~n~v~~~g~~~f~---~~~~~aG~dgvii~dl~~-ee~~~~~~ 141 (262)
T 2ekc_A 92 --FPDIPFLLMTYYNPIFRIGLEKFC---RLSREKGIDGFIVPDLPP-EEAEELKA 141 (262)
T ss_dssp --CTTSCEEEECCHHHHHHHCHHHHH---HHHHHTTCCEEECTTCCH-HHHHHHHH
T ss_pred --cCCCCEEEEecCcHHHHhhHHHHH---HHHHHcCCCEEEECCCCH-HHHHHHHH
Confidence 2 3456665333222233444444 445689999999887764 45555543
No 378
>1n8f_A DAHP synthetase; (beta/alpha)8 barrel, metal binding protein; HET: PEP; 1.75A {Escherichia coli} SCOP: c.1.10.4 PDB: 1gg1_A 1kfl_A* 1qr7_A*
Probab=88.96 E-value=5.7 Score=40.47 Aligned_cols=70 Identities=23% Similarity=0.354 Sum_probs=42.9
Q ss_pred cCCc--EEEeCCCCCCC-----HHHHHHHHHHHHHhCc---cEEEeCCCCC------CCCCCCCCCCccc-------CHH
Q 012478 149 VSIP--VIGDGDNGYGN-----AMNVKRTVKGYIKAGF---AGIILEDQVS------PKGCGHTRGRKVV-------SRE 205 (462)
Q Consensus 149 ~~iP--VIaD~DtGyG~-----~~nv~rtVk~l~~AGa---aGI~IEDq~~------PKrCGH~~gk~Lv-------p~e 205 (462)
.++| ||+|+=++-++ -..+...+-.-+.+|+ +|+.||--.. +..+....|+.+. .++
T Consensus 256 ~~lp~~VivD~SH~ns~k~~~~Q~~vv~~laa~ia~G~~~i~GlmiEshl~dG~Q~l~~~~~l~yG~SITD~Ci~w~~t~ 335 (350)
T 1n8f_A 256 AGLPAQVMIDFSHANSSKQFKKQMDVCADVCQQIAGGEKAIIGVMVESHLVEGNQSLESGEPLAYGKSITDACIGWEDTD 335 (350)
T ss_dssp TTCCCCEEEECSGGGTTTCGGGHHHHHHHHHHHHHTTCCSEEEEEEEBCSSSBBCCSSSCSCCCTTCBSSSCBBCHHHHH
T ss_pred cCCCCeEEEECCCcccCccccccHHHHHHHHHHHHcCCCcccEEEEEeccCCCCcCCCCCccccCCCcCccccCCHHHHH
Confidence 4789 99999886332 2334444446677899 9999986532 2222233455443 256
Q ss_pred HHHHHHHHHHHHH
Q 012478 206 EAVMRIKAAVDAR 218 (462)
Q Consensus 206 e~~~kI~AA~~Ar 218 (462)
.++..+..++..|
T Consensus 336 ~ll~~la~~~~~r 348 (350)
T 1n8f_A 336 ALLRQLANAVKAR 348 (350)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 6777776666554
No 379
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=88.89 E-value=1.4 Score=43.78 Aligned_cols=119 Identities=17% Similarity=0.243 Sum_probs=80.7
Q ss_pred CCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHH
Q 012478 162 GNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEE 241 (462)
Q Consensus 162 G~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~glde 241 (462)
+++....+.++++.++|..+++|-- | .++.+++|++++++. |+++.+ |-|+.....+++
T Consensus 140 ~~~~~~~~~a~~~~~~Gf~~vKik~-------~---------~~~~~e~v~avr~~~---g~~~~l--~vDan~~~~~~~ 198 (368)
T 1sjd_A 140 DTIPQLLDVVGGYLDEGYVRIKLKI-------E---------PGWDVEPVRAVRERF---GDDVLL--QVDANTAYTLGD 198 (368)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEEC-------B---------TTBSHHHHHHHHHHH---CTTSEE--EEECTTCCCGGG
T ss_pred CCHHHHHHHHHHHHHhCccEEEEec-------C---------chhHHHHHHHHHHhc---CCCceE--EEeccCCCCHHH
Confidence 4677788888899999999999821 1 022356777777664 567765 568877777899
Q ss_pred HHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHH---hcC-CCEEeccch
Q 012478 242 SLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE---ELG-FKLVAYPLS 312 (462)
Q Consensus 242 AI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~---~lG-v~~V~yp~~ 312 (462)
++.++++.+.|.+ |+|-+ .+.+.++++.+.++ +|+..+ +. ..+.+++. +.| ++.|..-..
T Consensus 199 -~~~~~~l~~~~i~--~iE~P~~~~~~~~~~~l~~~~~-ipIa~d-----E~--~~~~~~~~~~i~~~~~d~v~ik~~ 265 (368)
T 1sjd_A 199 -APQLARLDPFGLL--LIEQPLEEEDVLGHAELARRIQ-TPICLD-----ES--IVSARAAADAIKLGAVQIVNIKPG 265 (368)
T ss_dssp -HHHHHTTGGGCCS--EEECCSCTTCHHHHHHHHTTCS-SCEEES-----TT--CCSHHHHHHHHHTTCCSEEEECTT
T ss_pred -HHHHHHHHhcCCC--eEeCCCChhhHHHHHHHHHhCC-CCEEEC-----CC--cCCHHHHHHHHHcCCCCEEEeccc
Confidence 9999999999887 45643 36678888888765 665532 21 23444444 445 677766443
No 380
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=88.85 E-value=5.1 Score=40.69 Aligned_cols=153 Identities=12% Similarity=-0.008 Sum_probs=85.5
Q ss_pred HHHHHHHHhCCcEEEec---cHHHHhhh----ccCCCCCCCCHHH----HHHHHHHHHhhcC-CcEEEeCCCC--C----
Q 012478 100 LSAKLVEKSGFSFCFTS---GFSISAAR----LALPDTGFISYGE----MVDQGQLITQAVS-IPVIGDGDNG--Y---- 161 (462)
Q Consensus 100 lSArl~e~aGfdaI~vS---G~avSas~----lG~PD~g~vsl~E----ml~~~~~I~ra~~-iPVIaD~DtG--y---- 161 (462)
-.|+.+.++|||+|=+- |+-+.-.. .-.-|.--=+++. +++.++.|+++++ -||.+.+-.+ |
T Consensus 170 ~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~ 249 (377)
T 2r14_A 170 QAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLT 249 (377)
T ss_dssp HHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCC
T ss_pred HHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCC
Confidence 46778889999999874 33332110 0112321123432 3445666666664 2999986321 1
Q ss_pred -CC-HHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccH
Q 012478 162 -GN-AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (462)
Q Consensus 162 -G~-~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gl 239 (462)
|. ..+..+.++.++++|++.|++-..... +...+. + -+++.+|+.+ .+..++.+++-+
T Consensus 250 ~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~---~~~~~~---~-~~~~~~ik~~------~~iPvi~~Ggi~------- 309 (377)
T 2r14_A 250 DDEPEAMAFYLAGELDRRGLAYLHFNEPDWI---GGDITY---P-EGFREQMRQR------FKGGLIYCGNYD------- 309 (377)
T ss_dssp CSCHHHHHHHHHHHHHHTTCSEEEEECCC---------CC---C-TTHHHHHHHH------CCSEEEEESSCC-------
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCccc---CCCCcc---h-HHHHHHHHHH------CCCCEEEECCCC-------
Confidence 33 357788899999999999999554311 000111 1 1344444332 123444444432
Q ss_pred HHHHHHHHHhHhcC-CcEEEec--CCCCHHHHHHHHHhC
Q 012478 240 EESLRRSRAFADAG-ADVLFID--ALASKEEMKAFCEIS 275 (462)
Q Consensus 240 deAI~RakAy~eAG-AD~Ifie--~~~s~eei~~i~~~v 275 (462)
.+.+..+.+.| ||+|.+- .+.+++..+++.+..
T Consensus 310 ---~~~a~~~l~~g~aD~V~igR~~l~~P~l~~k~~~g~ 345 (377)
T 2r14_A 310 ---AGRAQARLDDNTADAVAFGRPFIANPDLPERFRLGA 345 (377)
T ss_dssp ---HHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTC
T ss_pred ---HHHHHHHHHCCCceEEeecHHHHhCchHHHHHHcCC
Confidence 33567777787 9999983 345566777777643
No 381
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=88.85 E-value=7.9 Score=39.40 Aligned_cols=124 Identities=15% Similarity=0.173 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHh-CccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 164 AMNVKRTVKGYIKA-GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 164 ~~nv~rtVk~l~~A-GaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
++.+.+.++++.+. |...+||- .| .+.++-+++|+|++++. +++.+. .|+-.....++|
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~K-------vG-------~~~~~d~~~v~avR~~~----~~~~l~--vDaN~~w~~~~A 228 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLK-------GT-------TDCAGDVAILRAVREAL----PGVNLR--VDPNAAWSVPDS 228 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEE-------CC-------SCHHHHHHHHHHHHHHC----TTSEEE--EECTTCSCHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEe-------cC-------CCHHHHHHHHHHHHHhC----CCCeEE--eeCCCCCCHHHH
Confidence 46778888888888 99999993 22 13566788999988875 344332 377777889999
Q ss_pred HHHHHHhHhcCCcEEEecCC-CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcC-CCEEeccchHH
Q 012478 243 LRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELG-FKLVAYPLSLI 314 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lG-v~~V~yp~~ll 314 (462)
++.++++.+.|.+ |+|-+ ++.+.++++.+..+ +|+...=.. +-.....++-+.| ++.+..-..-.
T Consensus 229 ~~~~~~l~~~~i~--~iEqP~~d~~~~~~l~~~~~-iPIa~dE~~----~~~~~~~~~i~~~a~d~v~~k~~~~ 295 (398)
T 4dye_A 229 VRAGIALEELDLE--YLEDPCVGIEGMAQVKAKVR-IPLCTNMCV----VRFEDFAPAMRLNAVDVIHGDVYKW 295 (398)
T ss_dssp HHHHHHHGGGCCS--EEECCSSHHHHHHHHHHHCC-SCEEESSSC----CSGGGHHHHHHTTCCSEEEECHHHH
T ss_pred HHHHHHHhhcCCC--EEcCCCCCHHHHHHHHhhCC-CCEEeCCcC----CCHHHHHHHHHhCCCCEEEeCcccc
Confidence 9999999998755 55543 46778888888876 676543111 1112344555556 66666554443
No 382
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=88.76 E-value=2 Score=43.42 Aligned_cols=90 Identities=19% Similarity=0.131 Sum_probs=57.6
Q ss_pred HHHHHHhC-CCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhc--CCcEEEe
Q 012478 80 SLRQILEL-PGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV--SIPVIGD 156 (462)
Q Consensus 80 ~LR~ll~~-~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~--~iPVIaD 156 (462)
.++++.+. +.++++-++.+.-.|+.++++|+|+|.+|+.+- . ..|.+ .+.-+ .+..+.+.+ ++|||+|
T Consensus 216 ~i~~l~~~~~~pv~vK~~~~~e~a~~a~~~Gad~I~vs~~gg---r--~~~~~-~~~~~---~l~~v~~~~~~~ipvia~ 286 (370)
T 1gox_A 216 DVAWLQTITSLPILVKGVITAEDARLAVQHGAAGIIVSNHGA---R--QLDYV-PATIM---ALEEVVKAAQGRIPVFLD 286 (370)
T ss_dssp HHHHHHHHCCSCEEEECCCSHHHHHHHHHTTCSEEEECCGGG---T--SSTTC-CCHHH---HHHHHHHHTTTSSCEEEE
T ss_pred HHHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEECCCCC---c--cCCCc-ccHHH---HHHHHHHHhCCCCEEEEE
Confidence 34444432 456666688999999999999999999986441 1 12434 33323 334444445 6999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012478 157 GDNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 157 ~DtGyG~~~nv~rtVk~l~~AGaaGI~I 184 (462)
.. ..+..++. ++..+||++|.|
T Consensus 287 GG--I~~~~D~~----k~l~~GAdaV~i 308 (370)
T 1gox_A 287 GG--VRRGTDVF----KALALGAAGVFI 308 (370)
T ss_dssp SS--CCSHHHHH----HHHHHTCSEEEE
T ss_pred CC--CCCHHHHH----HHHHcCCCEEee
Confidence 43 33444554 444589999998
No 383
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=88.75 E-value=2.3 Score=44.22 Aligned_cols=98 Identities=17% Similarity=0.145 Sum_probs=59.3
Q ss_pred CCc-EEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCC--------CCCCCCCCCcccCHHHHHHHHHHHHHHHHh
Q 012478 150 SIP-VIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSP--------KGCGHTRGRKVVSREEAVMRIKAAVDARKE 220 (462)
Q Consensus 150 ~iP-VIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~P--------KrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~ 220 (462)
++| |++=+--++ +..++.+.++.++++||+||.+-..... ...|...|+++.|.. .+-|+.++++
T Consensus 268 ~~P~V~VKi~pd~-~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~a--l~~I~~v~~~--- 341 (415)
T 3i65_A 268 KKPLVFVKLAPDL-NQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDIS--TKFICEMYNY--- 341 (415)
T ss_dssp SCCEEEEEECSCC-CHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHH--HHHHHHHHHH---
T ss_pred CCCeEEEEecCCC-CHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHH--HHHHHHHHHH---
Confidence 689 888877665 3456888889999999999999765421 012223355554332 3334433333
Q ss_pred hCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEec
Q 012478 221 SGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFID 260 (462)
Q Consensus 221 ~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie 260 (462)
.+.++-|++=-+-.. .+ .+..+.++|||+|.+-
T Consensus 342 v~~~iPIIg~GGI~s---~e----Da~e~l~aGAd~VqIg 374 (415)
T 3i65_A 342 TNKQIPIIASGGIFS---GL----DALEKIEAGASVCQLY 374 (415)
T ss_dssp TTTCSCEEECSSCCS---HH----HHHHHHHHTEEEEEES
T ss_pred hCCCCCEEEECCCCC---HH----HHHHHHHcCCCEEEEc
Confidence 233566666544332 23 4555667999999873
No 384
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=88.75 E-value=3.3 Score=40.65 Aligned_cols=109 Identities=16% Similarity=0.028 Sum_probs=74.9
Q ss_pred CCCHHHHHHHHHHHHh---hcCCcEEEeCCCCC-CCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHH
Q 012478 132 FISYGEMVDQGQLITQ---AVSIPVIGDGDNGY-GNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEA 207 (462)
Q Consensus 132 ~vsl~Eml~~~~~I~r---a~~iPVIaD~DtGy-G~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~ 207 (462)
..|.+|.++.++.+.+ ..+..|.+++++++ -++..+.+.++.+.++|+.-|.|-|.. | +..++++
T Consensus 113 ~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~-----G------~~~P~~v 181 (293)
T 3ewb_X 113 KMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTAIDAGATVINIPDTV-----G------YTNPTEF 181 (293)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGGSCHHHHHHHHHHHHHTTCCEEEEECSS-----S------CCCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEEecCCC-----C------CCCHHHH
Confidence 3688998888777654 34678888888754 367889999999999999999999986 3 3445677
Q ss_pred HHHHHHHHHHHHhh-CCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEE
Q 012478 208 VMRIKAAVDARKES-GSDIVIVARTDSRQALSLEESLRRSRAFADAGADVL 257 (462)
Q Consensus 208 ~~kI~AA~~Ar~~~-g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~I 257 (462)
.+.|+++++..... +..+-+-...|. .-++.-+.+..+|||+.|
T Consensus 182 ~~lv~~l~~~~~~~~~~~l~~H~Hnd~------Gla~AN~laA~~aGa~~v 226 (293)
T 3ewb_X 182 GQLFQDLRREIKQFDDIIFASHCHDDL------GMATANALAAIENGARRV 226 (293)
T ss_dssp HHHHHHHHHHCTTGGGSEEEEECBCTT------SCHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHhcCCccCceEEEEeCCCc------ChHHHHHHHHHHhCCCEE
Confidence 77777776553210 011333333332 234667778889999965
No 385
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=88.54 E-value=8.3 Score=38.86 Aligned_cols=125 Identities=18% Similarity=0.220 Sum_probs=83.5
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccH
Q 012478 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (462)
Q Consensus 160 GyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gl 239 (462)
|.+++....+.++.+.+.|...+||-= |. -+.++-+++|+|++++. +++.+. .|+......
T Consensus 145 ~~~~~~~~~~~a~~~~~~G~~~~K~Kv-------g~------~~~~~d~~~v~avR~a~----~~~~l~--vDan~~~~~ 205 (385)
T 3i6e_A 145 ANPDFDADIALMERLRADGVGLIKLKT-------GF------RDHAFDIMRLELIARDF----PEFRVR--VDYNQGLEI 205 (385)
T ss_dssp CCSSHHHHHHHHHHHHHHTCCEEEEEC-------SS------SCHHHHHHHHHHHHHHC----TTSEEE--EECTTCCCG
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEec-------CC------CCHHHHHHHHHHHHHhC----CCCeEE--EECCCCCCH
Confidence 456777777778888888999999932 21 13566688999888775 344433 377777788
Q ss_pred HHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHh---cC-CCEEeccch
Q 012478 240 EESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE---LG-FKLVAYPLS 312 (462)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~---lG-v~~V~yp~~ 312 (462)
++|++.++++.+.|.+ |+|-+ .+.+.++++.+..+ +|+..+ .. ..+..++.+ .| ++.+..-..
T Consensus 206 ~~A~~~~~~L~~~~i~--~iEqP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~~~~~~~d~v~~k~~ 275 (385)
T 3i6e_A 206 DEAVPRVLDVAQFQPD--FIEQPVRAHHFELMARLRGLTD-VPLLAD-----ES--VYGPEDMVRAAHEGICDGVSIKIM 275 (385)
T ss_dssp GGHHHHHHHHHTTCCS--CEECCSCTTCHHHHHHHHTTCS-SCEEES-----TT--CCSHHHHHHHHHHTCCSEEEECHH
T ss_pred HHHHHHHHHHHhcCCC--EEECCCCcccHHHHHHHHHhCC-CCEEEe-----CC--cCCHHHHHHHHHcCCCCEEEeccc
Confidence 9999999999998765 55644 35778888888765 676543 11 235555443 35 666655444
Q ss_pred H
Q 012478 313 L 313 (462)
Q Consensus 313 l 313 (462)
-
T Consensus 276 ~ 276 (385)
T 3i6e_A 276 K 276 (385)
T ss_dssp H
T ss_pred c
Confidence 3
No 386
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=88.51 E-value=8.9 Score=35.18 Aligned_cols=137 Identities=14% Similarity=0.109 Sum_probs=75.7
Q ss_pred HHHHHhhc-CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHh
Q 012478 142 GQLITQAV-SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKE 220 (462)
Q Consensus 142 ~~~I~ra~-~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~ 220 (462)
++.+.+.. +.+++.|.=.+- .+..+. +.+.++||+.|.+--.. + .++ +++++++.++
T Consensus 47 i~~l~~~~p~~~v~lD~kl~d-ip~t~~---~~~~~~Gad~itvh~~~---------g------~~~---l~~~~~~~~~ 104 (216)
T 1q6o_A 47 VRDLKALYPHKIVLADAKIAD-AGKILS---RMCFEANADWVTVICCA---------D------INT---AKGALDVAKE 104 (216)
T ss_dssp HHHHHHHCTTSEEEEEEEECS-CHHHHH---HHHHHTTCSEEEEETTS---------C------HHH---HHHHHHHHHH
T ss_pred HHHHHHhCCCCeEEEEEEecc-cHHHHH---HHHHhCCCCEEEEeccC---------C------HHH---HHHHHHHHHH
Confidence 44555544 578999988763 343333 37788999998772221 1 122 2233333333
Q ss_pred hCCCe--EEE-EecchhhcccHHHHHHHHHHhHhcCCcEEEe--------cCCC-CHHHHHHHHHhCC-CCceeeeeeec
Q 012478 221 SGSDI--VIV-ARTDSRQALSLEESLRRSRAFADAGADVLFI--------DALA-SKEEMKAFCEISP-LVPKMANMLEG 287 (462)
Q Consensus 221 ~g~d~--vIi-ARTDA~~~~gldeAI~RakAy~eAGAD~Ifi--------e~~~-s~eei~~i~~~v~-~vP~~~N~l~~ 287 (462)
.|... .++ +.| .. +...+.+.|.+-+++ ++.. +.++++.+.+..+ ..|+ - +.
T Consensus 105 ~g~~~~~~ll~~~t-~~----------~~~~l~~~~~~~~vl~~a~~~~~~G~~g~~~~i~~lr~~~~~~~~i--~-v~- 169 (216)
T 1q6o_A 105 FNGDVQIELTGYWT-WE----------QAQQWRDAGIGQVVYHRSRDAQAAGVAWGEADITAIKRLSDMGFKV--T-VT- 169 (216)
T ss_dssp TTCEEEEEECSCCC-HH----------HHHHHHHTTCCEEEEECCHHHHHTTCCCCHHHHHHHHHHHHTTCEE--E-EE-
T ss_pred cCCCceeeeeeCCC-hh----------hHHHHHhcCcHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCcE--E-EE-
Confidence 34332 245 665 21 222333446554444 3433 4677877776553 1222 2 22
Q ss_pred CCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012478 288 GGKTPILNPLELEELGFKLVAYPLSLIGV 316 (462)
Q Consensus 288 ~g~tP~ls~~eL~~lGv~~V~yp~~ll~a 316 (462)
||-.| -+.+++.+.|.+.+..+...+.+
T Consensus 170 GGI~~-~~~~~~~~aGad~ivvG~~I~~a 197 (216)
T 1q6o_A 170 GGLAL-EDLPLFKGIPIHVFIAGRSIRDA 197 (216)
T ss_dssp SSCCG-GGGGGGTTSCCSEEEESHHHHTS
T ss_pred CCcCh-hhHHHHHHcCCCEEEEeehhcCC
Confidence 35443 25788899999999999887764
No 387
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=88.51 E-value=1.1 Score=45.72 Aligned_cols=135 Identities=13% Similarity=0.162 Sum_probs=85.5
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccH
Q 012478 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (462)
Q Consensus 160 GyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gl 239 (462)
|.++++.+.+.++.+.+.|...+||-=+..+ ++... .-..++-+++|++++++. ++. .=|.|+-.....
T Consensus 162 ~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~---~~~~~--~~~~~~di~~v~avR~a~----~d~--~L~vDaN~~w~~ 230 (393)
T 3u9i_A 162 TTGSVTAAARAAQAIVARGVTTIKIKIGAGD---PDATT--IRTMEHDLARIVAIRDVA----PTA--RLILDGNCGYTA 230 (393)
T ss_dssp C---CHHHHHHHHHHHTTTCCEEEEECC----------C--HHHHHHHHHHHHHHHHHS----TTS--EEEEECCSCCCH
T ss_pred cCCCHHHHHHHHHHHHHcCCCeEEEEeCCCc---ccccc--cccHHHHHHHHHHHHHHC----CCC--eEEEEccCCCCH
Confidence 3456678888888999999999999322100 00000 011456678888888774 354 346798888899
Q ss_pred HHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHH---hcC-CCEEeccch
Q 012478 240 EESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE---ELG-FKLVAYPLS 312 (462)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~---~lG-v~~V~yp~~ 312 (462)
++|++.++++.++..+..|+|-+ .+.+.++++.+..+ +|+... .. ..+..++. +.| ++.+..=..
T Consensus 231 ~~A~~~~~~L~~~~~~i~~iEeP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~a~d~i~~k~~ 302 (393)
T 3u9i_A 231 PDALRLLDMLGVHGIVPALFEQPVAKDDEEGLRRLTATRR-VPVAAD-----ES--VASATDAARLARNAAVDVLNIKLM 302 (393)
T ss_dssp HHHHHHHHTTTTTTCCCSEEECCSCTTCTTHHHHHHHTCS-SCEEES-----TT--CCSHHHHHHHHHTTCCSEEEECHH
T ss_pred HHHHHHHHHHhhCCCCeEEEECCCCCCcHHHHHHHHhhCC-CcEEeC-----Cc--CCCHHHHHHHHHcCCCCEEEeccc
Confidence 99999999996556677888865 25678999998775 676532 11 23555443 445 666655444
Q ss_pred H
Q 012478 313 L 313 (462)
Q Consensus 313 l 313 (462)
.
T Consensus 303 ~ 303 (393)
T 3u9i_A 303 K 303 (393)
T ss_dssp H
T ss_pred c
Confidence 3
No 388
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=88.51 E-value=3.3 Score=41.97 Aligned_cols=155 Identities=13% Similarity=0.014 Sum_probs=85.5
Q ss_pred HHHHHHHHhCCcEEEecc---HHHHhhh----ccCCCCCCCCHHH----HHHHHHHHHhhcC-CcEEEeCCCC-C-----
Q 012478 100 LSAKLVEKSGFSFCFTSG---FSISAAR----LALPDTGFISYGE----MVDQGQLITQAVS-IPVIGDGDNG-Y----- 161 (462)
Q Consensus 100 lSArl~e~aGfdaI~vSG---~avSas~----lG~PD~g~vsl~E----ml~~~~~I~ra~~-iPVIaD~DtG-y----- 161 (462)
-.|+.+.++|||+|=+-+ +-+.-.. .-.-|.--=+++. +++.++.|+++++ -||.+++--+ +
T Consensus 171 ~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~ 250 (376)
T 1icp_A 171 VAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAG 250 (376)
T ss_dssp HHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCC
T ss_pred HHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCC
Confidence 467888899999998763 3221100 0112321123432 4555666666664 2999998532 1
Q ss_pred -CCH-HHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccH
Q 012478 162 -GNA-MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (462)
Q Consensus 162 -G~~-~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gl 239 (462)
++. ....+.++.++++|++.|++-...... .+. +.... +++.+|+.+ .+..++.+++-+
T Consensus 251 ~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~-~~~--~~~~~---~~~~~vr~~------~~iPvi~~G~i~------- 311 (376)
T 1icp_A 251 DTNPTALGLYMVESLNKYDLAYCHVVEPRMKT-AWE--KIECT---ESLVPMRKA------YKGTFIVAGGYD------- 311 (376)
T ss_dssp CSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC---------CC---CCSHHHHHH------CCSCEEEESSCC-------
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEcCCcccC-CCC--ccccH---HHHHHHHHH------cCCCEEEeCCCC-------
Confidence 233 467888999999999999995432100 000 00000 123344322 233555555542
Q ss_pred HHHHHHHHHhHhcC-CcEEEec--CCCCHHHHHHHHHhCC
Q 012478 240 EESLRRSRAFADAG-ADVLFID--ALASKEEMKAFCEISP 276 (462)
Q Consensus 240 deAI~RakAy~eAG-AD~Ifie--~~~s~eei~~i~~~v~ 276 (462)
.+.+..+.+.| ||+|.+- .+.+++..+++.+..+
T Consensus 312 ---~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k~~~g~~ 348 (376)
T 1icp_A 312 ---REDGNRALIEDRADLVAYGRLFISNPDLPKRFELNAP 348 (376)
T ss_dssp ---HHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCC
T ss_pred ---HHHHHHHHHCCCCcEEeecHHHHhCccHHHHHHcCCC
Confidence 12455666677 9999983 3456677888776543
No 389
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=88.50 E-value=5.4 Score=40.68 Aligned_cols=104 Identities=13% Similarity=0.141 Sum_probs=68.6
Q ss_pred HHHHHHHHHhCccEEEeCCCCC--CCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHH
Q 012478 168 KRTVKGYIKAGFAGIILEDQVS--PKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRR 245 (462)
Q Consensus 168 ~rtVk~l~~AGaaGI~IEDq~~--PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~R 245 (462)
.+.++++.+.|..++||- ... ..|.|...+. -+.++-+++|+|++++. |+++.|.. |+-....+++|++-
T Consensus 161 ~~~a~~~~~~G~~~~K~~-~~~~~~~K~G~~~~~--~~~~~d~e~v~avR~a~---g~d~~l~v--DaN~~~~~~~A~~~ 232 (410)
T 3dip_A 161 GVLAESLVAEGYAAMKIW-PFDDFASITPHHISL--TDLKDGLEPFRKIRAAV---GQRIEIMC--ELHSLWGTHAAARI 232 (410)
T ss_dssp HHHHHHHHHTTCSEEEEC-TTHHHHTTCTTCCCH--HHHHHHHHHHHHHHHHH---TTSSEEEE--ECTTCBCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEC-CccCccccccCcCCH--HHHHHHHHHHHHHHHHc---CCCceEEE--ECCCCCCHHHHHHH
Confidence 455678888999999992 100 0023321100 01345678888887764 56776654 66677789999999
Q ss_pred HHHhHhcCCcEEEecCC----CCHHHHHHHHHhCCCCceee
Q 012478 246 SRAFADAGADVLFIDAL----ASKEEMKAFCEISPLVPKMA 282 (462)
Q Consensus 246 akAy~eAGAD~Ifie~~----~s~eei~~i~~~v~~vP~~~ 282 (462)
++++.+.|.+. +|-+ .+.+.++++.+.++ +|+.+
T Consensus 233 ~~~L~~~~i~~--iEqP~~~~~~~~~~~~l~~~~~-iPIa~ 270 (410)
T 3dip_A 233 CNALADYGVLW--VEDPIAKMDNIPAVADLRRQTR-APICG 270 (410)
T ss_dssp HHHGGGGTCSE--EECCBSCTTCHHHHHHHHHHHC-CCEEE
T ss_pred HHHHHhcCCCE--EECCCCCcccHHHHHHHHhhCC-CCEEe
Confidence 99999988664 4443 26788899988765 67653
No 390
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=88.47 E-value=0.84 Score=45.86 Aligned_cols=85 Identities=20% Similarity=0.237 Sum_probs=64.6
Q ss_pred HHHHHHhCccEEEeCCC-CCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHh
Q 012478 171 VKGYIKAGFAGIILEDQ-VSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAF 249 (462)
Q Consensus 171 Vk~l~~AGaaGI~IEDq-~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy 249 (462)
.+.++++|+.+|-+-|- ..--..|+.+ ..+++.+|++..+++++.+. ++..|++=-|.--. +.+.+.+-++.|
T Consensus 52 A~i~e~aGfdai~vs~~~~a~~~lG~pD-~~~vt~~em~~~~~~I~r~~----~~~PviaD~d~Gyg-~~~~v~~tv~~l 125 (318)
T 1zlp_A 52 AAVVEKTGFHAAFVSGYSVSAAMLGLPD-FGLLTTTEVVEATRRITAAA----PNLCVVVDGDTGGG-GPLNVQRFIREL 125 (318)
T ss_dssp HHHHHHTTCSEEEECHHHHHHHHHCCCS-SSCSCHHHHHHHHHHHHHHS----SSSEEEEECTTCSS-SHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECcHHHhhHhcCCCC-CCCCCHHHHHHHHHHHHhhc----cCCCEEEeCCCCCC-CHHHHHHHHHHH
Confidence 35777899999999883 3211246644 35789999999999988774 26777776665422 678889999999
Q ss_pred HhcCCcEEEecC
Q 012478 250 ADAGADVLFIDA 261 (462)
Q Consensus 250 ~eAGAD~Ifie~ 261 (462)
+++||.+|-||.
T Consensus 126 ~~aGaagv~iED 137 (318)
T 1zlp_A 126 ISAGAKGVFLED 137 (318)
T ss_dssp HHTTCCEEEEEC
T ss_pred HHcCCcEEEECC
Confidence 999999999986
No 391
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=88.39 E-value=6.1 Score=39.33 Aligned_cols=132 Identities=17% Similarity=0.106 Sum_probs=80.5
Q ss_pred HHHHHHHhCCcEEEeccHHHHhhhccC-CCCCCCCHHHHHHHHHHHHhh-----cCCcEEEeCCCCC-CCHHHHHHHHHH
Q 012478 101 SAKLVEKSGFSFCFTSGFSISAARLAL-PDTGFISYGEMVDQGQLITQA-----VSIPVIGDGDNGY-GNAMNVKRTVKG 173 (462)
Q Consensus 101 SArl~e~aGfdaI~vSG~avSas~lG~-PD~g~vsl~Eml~~~~~I~ra-----~~iPVIaD~DtGy-G~~~nv~rtVk~ 173 (462)
+++.++++|+.+|-+=+-.. --..|+ +...+++.+||+..++..+.+ .+.-|+|=.|.=. .+...+.+-.+.
T Consensus 100 tv~~l~~aGaagv~iEDq~~-~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~a 178 (302)
T 3fa4_A 100 TTEQYSRSGVAAFHIEDQVQ-TKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGYEESVARLRA 178 (302)
T ss_dssp HHHHHHHTTCCEEEECSBCC-C-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHCHHHHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCCCC-CcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCCHHHHHHHHHH
Confidence 45677889999998875221 112343 345789999999998888654 3466787777621 234556666789
Q ss_pred HHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEE----ecchhhcccHHHHHHHHHHh
Q 012478 174 YIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA----RTDSRQALSLEESLRRSRAF 249 (462)
Q Consensus 174 l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiA----RTDA~~~~gldeAI~RakAy 249 (462)
|.+|||++|.+|.-. +.+| +.+|.+ +-. +.+++++. .|... -...+
T Consensus 179 y~eAGAD~ifi~g~~--------------~~~e-i~~~~~---~~~--~~Pl~~n~~~~g~~p~~----------~~~eL 228 (302)
T 3fa4_A 179 ARDAGADVGFLEGIT--------------SREM-ARQVIQ---DLA--GWPLLLNMVEHGATPSI----------SAAEA 228 (302)
T ss_dssp HHTTTCSEEEETTCC--------------CHHH-HHHHHH---HTT--TSCEEEECCTTSSSCCC----------CHHHH
T ss_pred HHHcCCCEEeecCCC--------------CHHH-HHHHHH---Hhc--CCceeEEEecCCCCCCC----------CHHHH
Confidence 999999999998742 2333 334433 221 23555542 22111 14567
Q ss_pred HhcCCcEEEecCCC
Q 012478 250 ADAGADVLFIDALA 263 (462)
Q Consensus 250 ~eAGAD~Ifie~~~ 263 (462)
.++|...|..+...
T Consensus 229 ~~lGv~~v~~~~~~ 242 (302)
T 3fa4_A 229 KEMGFRIIIFPFAA 242 (302)
T ss_dssp HHHTCSEEEETTTT
T ss_pred HHcCCCEEEEchHH
Confidence 78999988776543
No 392
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=88.38 E-value=1 Score=45.92 Aligned_cols=82 Identities=11% Similarity=0.068 Sum_probs=50.3
Q ss_pred CceEec-ccCChHHHHHHHHhCCcEEEeccH-HHHh-h--hccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCC
Q 012478 89 GVHQGP-ACFDALSAKLVEKSGFSFCFTSGF-SISA-A--RLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGN 163 (462)
Q Consensus 89 ~~iv~p-~ayDalSArl~e~aGfdaI~vSG~-avSa-s--~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~ 163 (462)
+..+++ ++-+.-.|+.++++|+|+|.+|.. +-.. + ..|. + ++ .+..+..+++... |||+|..- .+
T Consensus 141 ~~~Vi~G~V~T~e~A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~---g-~p---~l~aI~~~~~~~~-PVIAdGGI--~~ 210 (361)
T 3r2g_A 141 SRCIMAGNVATYAGADYLASCGADIIKAGIGGGSVCSTRIKTGF---G-VP---MLTCIQDCSRADR-SIVADGGI--KT 210 (361)
T ss_dssp TCEEEEEEECSHHHHHHHHHTTCSEEEECCSSSSCHHHHHHHCC---C-CC---HHHHHHHHTTSSS-EEEEESCC--CS
T ss_pred CCeEEEcCcCCHHHHHHHHHcCCCEEEEcCCCCcCccccccCCc---c-HH---HHHHHHHHHHhCC-CEEEECCC--CC
Confidence 556666 699999999999999999999721 1100 0 0111 1 22 2333344444444 99999533 34
Q ss_pred HHHHHHHHHHHHHhCccEEEe
Q 012478 164 AMNVKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 164 ~~nv~rtVk~l~~AGaaGI~I 184 (462)
..++. +..++||++|.|
T Consensus 211 ~~di~----kALa~GAd~V~i 227 (361)
T 3r2g_A 211 SGDIV----KALAFGADFVMI 227 (361)
T ss_dssp HHHHH----HHHHTTCSEEEE
T ss_pred HHHHH----HHHHcCCCEEEE
Confidence 44444 444689999999
No 393
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=88.17 E-value=1.9 Score=40.36 Aligned_cols=130 Identities=18% Similarity=0.121 Sum_probs=80.0
Q ss_pred CCcEEEeCCCCCCC-HHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEE
Q 012478 150 SIPVIGDGDNGYGN-AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV 228 (462)
Q Consensus 150 ~iPVIaD~DtGyG~-~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIi 228 (462)
+.+|++|.=.+ + +..+...++.+.++||++|.+=-.. | .+ -|++++++.. +..+.|.
T Consensus 58 ~~~v~lD~K~~--DI~nT~~~~v~~~~~~GaD~vTvh~~~---------G------~~---~l~~~~~~~~--~~~~~V~ 115 (213)
T 1vqt_A 58 NLKIILDLKFC--DIPSTVERSIKSWDHPAIIGFTVHSCA---------G------YE---SVERALSATD--KHVFVVV 115 (213)
T ss_dssp TCEEEEEEEEC--SCHHHHHHHHHHHCCTTEEEEEEEGGG---------C------HH---HHHHHHHHCS--SEEEEEC
T ss_pred CCCEEEEeecc--cCchHHHHHHHHHHHCCCCEEEEeccC---------C------HH---HHHHHHHhcC--CCeEEEE
Confidence 78999998764 4 3446777889999999999883321 1 12 2444444432 1123333
Q ss_pred EecchhhcccH-HHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCC---------CCHHH
Q 012478 229 ARTDSRQALSL-EESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPI---------LNPLE 298 (462)
Q Consensus 229 ARTDA~~~~gl-deAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~---------ls~~e 298 (462)
..|.-.. . + +....+++. .++|+| + +- +.++++++.+..+. | .+. ||-.|. .++++
T Consensus 116 ~lts~~~-~-l~~~v~~~a~~-~e~G~d-v-V~---~~~~~~~ir~~~~~-~----~v~-pGI~~~~~~~dq~rv~t~~~ 181 (213)
T 1vqt_A 116 KLTSMEG-S-LEDYMDRIEKL-NKLGCD-F-VL---PGPWAKALREKIKG-K----ILV-PGIRMEVKADDQKDVVTLEE 181 (213)
T ss_dssp CCTTSCC-C-HHHHHHHHHHH-HHHTCE-E-EC---CHHHHHHHTTTCCS-C----EEE-CCBC---------CCBCHHH
T ss_pred EeCCCCH-H-HHHHHHHHHHH-hcCCCE-E-EE---cHHHHHHHHHHCCC-C----EEE-CCCCCCCCccchhhcCCHHH
Confidence 3333221 2 4 667778888 999999 3 32 23678887776542 3 222 232232 24788
Q ss_pred HHhcCCCEEeccchHHHH
Q 012478 299 LEELGFKLVAYPLSLIGV 316 (462)
Q Consensus 299 L~~lGv~~V~yp~~ll~a 316 (462)
.+.|.+.++.|-..+.+
T Consensus 182 -i~aGad~iVvGR~I~~a 198 (213)
T 1vqt_A 182 -MKGIANFAVLGREIYLS 198 (213)
T ss_dssp -HTTTCSEEEESHHHHTS
T ss_pred -HHCCCCEEEEChhhcCC
Confidence 89999999999887754
No 394
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=88.11 E-value=0.79 Score=44.02 Aligned_cols=97 Identities=19% Similarity=0.220 Sum_probs=62.9
Q ss_pred chHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhh--cCCcE
Q 012478 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQA--VSIPV 153 (462)
Q Consensus 76 ~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra--~~iPV 153 (462)
.....+|+++. .+.++...|++.-.++.+++.|+|.|.++..--+ ...|+...++++ ..+.+++. .++||
T Consensus 123 l~~~~~r~~~~-~~~~iG~S~ht~~Ea~~A~~~GaDyI~vgpvf~T---~tK~~~~~~gl~----~l~~~~~~~~~~iPv 194 (243)
T 3o63_A 123 LPVNVARQILA-PDTLIGRSTHDPDQVAAAAAGDADYFCVGPCWPT---PTKPGRAAPGLG----LVRVAAELGGDDKPW 194 (243)
T ss_dssp SCHHHHHHHSC-TTCEEEEEECSHHHHHHHHHSSCSEEEECCSSCC---CC-----CCCHH----HHHHHHTC---CCCE
T ss_pred CCHHHHHHhhC-CCCEEEEeCCCHHHHHHHhhCCCCEEEEcCccCC---CCCCCcchhhHH----HHHHHHHhccCCCCE
Confidence 34567787764 4567777899999999999999999999852211 234554445554 34455554 47999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCC
Q 012478 154 IGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQ 187 (462)
Q Consensus 154 IaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq 187 (462)
++.. |- ++ ++++.+.++||+||-+=..
T Consensus 195 vAiG--GI-~~----~ni~~~~~aGa~gvav~sa 221 (243)
T 3o63_A 195 FAIG--GI-NA----QRLPAVLDAGARRIVVVRA 221 (243)
T ss_dssp EEES--SC-CT----TTHHHHHHTTCCCEEESHH
T ss_pred EEec--CC-CH----HHHHHHHHcCCCEEEEeHH
Confidence 9982 22 33 3445777899999998544
No 395
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=88.04 E-value=2.8 Score=41.54 Aligned_cols=131 Identities=18% Similarity=0.159 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHH
Q 012478 164 AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESL 243 (462)
Q Consensus 164 ~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI 243 (462)
...+.+.++++++.||+-|-|-.+.. -.|-+-++.+|-.+|+.-++++-.+. .+..|.- |.... ++
T Consensus 62 ~~~a~~~a~~~v~~GAdiIDIGgeSt------rPga~~v~~~eE~~RvvpvI~~l~~~-~~vpiSI--DT~~~----~V- 127 (297)
T 1tx2_A 62 VDAAVRHAKEMRDEGAHIIDIGGEST------RPGFAKVSVEEEIKRVVPMIQAVSKE-VKLPISI--DTYKA----EV- 127 (297)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEESCC----------CCCCCHHHHHHHHHHHHHHHHHH-SCSCEEE--ECSCH----HH-
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCcC------CCCCCCCCHHHHHHHHHHHHHHHHhc-CCceEEE--eCCCH----HH-
Confidence 46677788999999999999965431 12334567777777776555543321 1333322 32221 22
Q ss_pred HHHHHhHhcCCcEEE-ecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCC-------------CHHHHHhcCCC---E
Q 012478 244 RRSRAFADAGADVLF-IDALASKEEMKAFCEISPLVPKMANMLEGGGKTPIL-------------NPLELEELGFK---L 306 (462)
Q Consensus 244 ~RakAy~eAGAD~If-ie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~l-------------s~~eL~~lGv~---~ 306 (462)
+++..++||++|- +.+....+++..+++... .|..+--.. | .|.. ..+.+.++|++ +
T Consensus 128 --~~aAl~aGa~iINdvsg~~~d~~m~~~aa~~g-~~vVlmh~~--G-~p~y~d~v~ev~~~l~~~i~~a~~~GI~~~~I 201 (297)
T 1tx2_A 128 --AKQAIEAGAHIINDIWGAKAEPKIAEVAAHYD-VPIILMHNR--D-NMNYRNLMADMIADLYDSIKIAKDAGVRDENI 201 (297)
T ss_dssp --HHHHHHHTCCEEEETTTTSSCTHHHHHHHHHT-CCEEEECCC--S-CCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGE
T ss_pred --HHHHHHcCCCEEEECCCCCCCHHHHHHHHHhC-CcEEEEeCC--C-CCCcchHHHHHHHHHHHHHHHHHHcCCChhcE
Confidence 3333445999995 334431246666666554 454432221 2 3431 23556677886 4
Q ss_pred EeccchHH
Q 012478 307 VAYPLSLI 314 (462)
Q Consensus 307 V~yp~~ll 314 (462)
++=|...+
T Consensus 202 ilDPg~Gf 209 (297)
T 1tx2_A 202 ILDPGIGF 209 (297)
T ss_dssp EEECCTTS
T ss_pred EEeCCCCc
Confidence 55565544
No 396
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=88.02 E-value=2.2 Score=39.45 Aligned_cols=166 Identities=15% Similarity=0.170 Sum_probs=89.7
Q ss_pred HHHHHHhCCcEEEeccHHHHhhhcc--CCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCc
Q 012478 102 AKLVEKSGFSFCFTSGFSISAARLA--LPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGF 179 (462)
Q Consensus 102 Arl~e~aGfdaI~vSG~avSas~lG--~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGa 179 (462)
++.+.++|.+.+-+.- +-| +|... .. ++.++.|.+.++.|+.++. |-+. ..+.++.+.++|+
T Consensus 29 i~~~~~~G~d~i~l~~------~dg~f~~~~~-~~----~~~i~~l~~~~~~~~~v~l---~vnd--~~~~v~~~~~~Ga 92 (230)
T 1rpx_A 29 VKAIEQAGCDWIHVDV------MDGRFVPNIT-IG----PLVVDSLRPITDLPLDVHL---MIVE--PDQRVPDFIKAGA 92 (230)
T ss_dssp HHHHHHTTCCCEEEEE------EBSSSSSCBC-CC----HHHHHHHGGGCCSCEEEEE---ESSS--HHHHHHHHHHTTC
T ss_pred HHHHHHCCCCEEEEee------ccCCcccccc-cC----HHHHHHHHhccCCcEEEEE---EecC--HHHHHHHHHHcCC
Confidence 3566678988776642 011 23221 12 3566777776678888876 4332 2356778888999
Q ss_pred cEEEeCCC--CCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEE
Q 012478 180 AGIILEDQ--VSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVL 257 (462)
Q Consensus 180 aGI~IEDq--~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~I 257 (462)
++|++-+. .. + ...+.++.+ +.. |..+.+...+.. . .++.++|. .|+|.|
T Consensus 93 d~v~vh~~~~~~----------~--~~~~~~~~~---~~~----g~~ig~~~~p~t----~----~e~~~~~~-~~~d~v 144 (230)
T 1rpx_A 93 DIVSVHCEQSST----------I--HLHRTINQI---KSL----GAKAGVVLNPGT----P----LTAIEYVL-DAVDLV 144 (230)
T ss_dssp SEEEEECSTTTC----------S--CHHHHHHHH---HHT----TSEEEEEECTTC----C----GGGGTTTT-TTCSEE
T ss_pred CEEEEEecCccc----------h--hHHHHHHHH---HHc----CCcEEEEeCCCC----C----HHHHHHHH-hhCCEE
Confidence 99988554 20 0 112333332 221 222222222111 1 12334443 689988
Q ss_pred EecCCC--------C---HHHHHHHHHhCC----CCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012478 258 FIDALA--------S---KEEMKAFCEISP----LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316 (462)
Q Consensus 258 fie~~~--------s---~eei~~i~~~v~----~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~a 316 (462)
++-++. . .+.++++.+..+ .+|.. + .||-+| -+..++.+.|...|..+..++.+
T Consensus 145 l~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~---v-~GGI~~-~n~~~~~~aGad~vvvgSaI~~a 213 (230)
T 1rpx_A 145 LIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIE---V-DGGVGP-KNAYKVIEAGANALVAGSAVFGA 213 (230)
T ss_dssp EEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEE---E-ESSCCT-TTHHHHHHHTCCEEEESHHHHTS
T ss_pred EEEEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEE---E-ECCCCH-HHHHHHHHcCCCEEEEChhhhCC
Confidence 554331 1 244455554331 23432 2 346554 47778999999999999887764
No 397
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=87.90 E-value=1.2 Score=44.10 Aligned_cols=131 Identities=18% Similarity=0.148 Sum_probs=84.5
Q ss_pred HHHHHHhCccEEEeCCC-CCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHh
Q 012478 171 VKGYIKAGFAGIILEDQ-VSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAF 249 (462)
Q Consensus 171 Vk~l~~AGaaGI~IEDq-~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy 249 (462)
.+.++++|+.+|-+-|. ..--..|+.+ ..+++.+|++..+++++.+.. .-|++=-|.-...+.+.+.+-++.|
T Consensus 30 A~~~~~aG~~ai~vs~~~~a~~~~G~pD-~~~vt~~em~~~~~~I~~~~~-----~PviaD~d~Gyg~~~~~~~~~v~~l 103 (295)
T 1xg4_A 30 ALLAQRAGYQAIYLSGGGVAAGSLGLPD-LGISTLDDVLTDIRRITDVCS-----LPLLVDADIGFGSSAFNVARTVKSM 103 (295)
T ss_dssp HHHHHHTTCSCEEECHHHHHHTTTCCCS-SSCSCHHHHHHHHHHHHHHCC-----SCEEEECTTCSSSSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECchHhhhhhcCCCC-CCCCCHHHHHHHHHHHHhhCC-----CCEEecCCcccCCCHHHHHHHHHHH
Confidence 45777899999999887 2111346654 347899999999999987743 3355544443223567889999999
Q ss_pred HhcCCcEEEecCC--------------CCH-HHHHH---HHHhCCCCceeeeeeecCCCCCCC----------CHHHHHh
Q 012478 250 ADAGADVLFIDAL--------------ASK-EEMKA---FCEISPLVPKMANMLEGGGKTPIL----------NPLELEE 301 (462)
Q Consensus 250 ~eAGAD~Ifie~~--------------~s~-eei~~---i~~~v~~vP~~~N~l~~~g~tP~l----------s~~eL~~ 301 (462)
.++||++|-||.- .+. +.+.+ .++.-...+..+|.- |... -...+++
T Consensus 104 ~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aR-----tda~~~~gl~~ai~ra~ay~e 178 (295)
T 1xg4_A 104 IKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMAR-----TDALAVEGLDAAIERAQAYVE 178 (295)
T ss_dssp HHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEE-----ECCHHHHCHHHHHHHHHHHHH
T ss_pred HHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEe-----cHHhhhcCHHHHHHHHHHHHH
Confidence 9999999999853 122 23333 333322235555532 3211 1346788
Q ss_pred cCCCEEeccch
Q 012478 302 LGFKLVAYPLS 312 (462)
Q Consensus 302 lGv~~V~yp~~ 312 (462)
+|...+..+..
T Consensus 179 AGAd~i~~e~~ 189 (295)
T 1xg4_A 179 AGAEMLFPEAI 189 (295)
T ss_dssp TTCSEEEETTC
T ss_pred cCCCEEEEeCC
Confidence 89998887653
No 398
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=87.90 E-value=7.6 Score=37.64 Aligned_cols=160 Identities=18% Similarity=0.051 Sum_probs=92.2
Q ss_pred cccCCCccccccCchH---HHHHHHHhC-CCceEecccCC--h----HHHHHHHHhCCcEEEeccHHHHhhhccCCCCCC
Q 012478 63 VYRKNSTGVEACLSPA---KSLRQILEL-PGVHQGPACFD--A----LSAKLVEKSGFSFCFTSGFSISAARLALPDTGF 132 (462)
Q Consensus 63 ~y~rgs~~~~~a~~~a---~~LR~ll~~-~~~iv~p~ayD--a----lSArl~e~aGfdaI~vSG~avSas~lG~PD~g~ 132 (462)
.+.-||...-+..+.. +-++...+. ++ ++.|+-. - --|+.++++|+|++++.. |-...
T Consensus 36 l~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~----------P~y~~ 103 (286)
T 2r91_A 36 VFVAGTTGLGPALSLQEKMELTDAATSAARR--VIVQVASLNADEAIALAKYAESRGAEAVASLP----------PYYFP 103 (286)
T ss_dssp EEETSTTTTGGGSCHHHHHHHHHHHHHHCSS--EEEECCCSSHHHHHHHHHHHHHTTCSEEEECC----------SCSST
T ss_pred EEECccccChhhCCHHHHHHHHHHHHHHhCC--EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcC----------CcCCC
Confidence 4455666655433332 233333332 33 4444433 2 235667788999998763 11122
Q ss_pred -CCHHHHHHHHHHHHhhcCCcEEE-eCC--CCCC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHH
Q 012478 133 -ISYGEMVDQGQLITQAVSIPVIG-DGD--NGYG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEA 207 (462)
Q Consensus 133 -vsl~Eml~~~~~I~ra~~iPVIa-D~D--tGyG-~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~ 207 (462)
.+.+++.+|-+.|++++++||+. +.| +|+. .+..+.+ .-.+.|||-... .
T Consensus 104 ~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~------~pnivgiKds~g-------d------------ 158 (286)
T 2r91_A 104 RLSERQIAKYFRDLCSAVSIPVFLYNYPAAVGRDVDARAAKE------LGCIRGVKDTNE-------S------------ 158 (286)
T ss_dssp TCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSSCCCHHHHHH------HSCEEEEEECCS-------C------------
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeChhhcCCCCCHHHHHh------cCCEEEEEeCCC-------C------------
Confidence 47899999999999999999876 776 3543 3444443 357889985332 1
Q ss_pred HHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCC-CCHHHHHHHHHh
Q 012478 208 VMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEI 274 (462)
Q Consensus 208 ~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~ 274 (462)
..++...+. . +++|.|..=.|... ..+..+|++..+--.- --++.+.++.+.
T Consensus 159 ~~~~~~~~~-~---~~~f~v~~G~d~~~-----------~~~l~~G~~G~is~~an~~P~~~~~l~~a 211 (286)
T 2r91_A 159 LAHTLAYKR-Y---LPQARVYNGSDSLV-----------FASFAVRLDGVVASSANYLPELLAGIRDA 211 (286)
T ss_dssp HHHHHHHHH-H---CTTSEEEECCGGGH-----------HHHHHTTCSEECCGGGTTCHHHHHHHHHH
T ss_pred HHHHHHHHh-c---CCCEEEEEccHHHH-----------HHHHHcCCCEEEecHHHhCHHHHHHHHHH
Confidence 223333333 1 45787776556532 2344589998864221 135666666664
No 399
>3n3m_A Orotidine 5'-phosphate decarboxylase; P. falciparum, 5'-monophosphate decarboxylase, 6- UMP, lyase; HET: PGE NUP; 1.47A {Plasmodium falciparum} SCOP: c.1.2.3 PDB: 2qaf_A* 3bar_A* 2q8z_A* 3mwa_A* 3n2m_A* 3bpw_A* 3n34_A* 3s9y_A* 2f84_A 2q8l_A 2za1_A* 2za2_A 2za3_A* 2zcg_A 3vi2_A*
Probab=87.78 E-value=1.3 Score=45.00 Aligned_cols=143 Identities=14% Similarity=0.025 Sum_probs=80.6
Q ss_pred cCCcEEEeCCCCCCCHH-HHHHHHHHH-HHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHH-HHHHHhhCCCe
Q 012478 149 VSIPVIGDGDNGYGNAM-NVKRTVKGY-IKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAA-VDARKESGSDI 225 (462)
Q Consensus 149 ~~iPVIaD~DtGyG~~~-nv~rtVk~l-~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA-~~Ar~~~g~d~ 225 (462)
.+.+|++|.=.| +.. .+...++.+ .+.|++.|.+--. .|.. -|+++ +++..+.++.+
T Consensus 148 ~g~~VflDlK~~--DIpnTv~~ya~~~~~~lgaD~vTVh~~---------~G~~---------~l~~a~~~~~~~~~~~v 207 (342)
T 3n3m_A 148 LNIPTILDMKIN--DIGNTVKNYRKFIFEYLKSDSCTVNIY---------MGTN---------MLKDICYDEEKNKYYSA 207 (342)
T ss_dssp HTCCEEEEEEEC--CCHHHHHHHHHHHHTTSCCSEEEECCT---------TCSG---------GGGGTSEETTTTEECEE
T ss_pred CCCeEEEEeecC--CcHHHHHHHHHHHHHhcCCCEEEEccc---------CCHH---------HHHHHHHHHHhhcCCcE
Confidence 479999999875 532 333445554 4579999998432 1221 12222 12222224578
Q ss_pred EEEEecchhhccc------------HHHHHHHHHHhH-------hcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeee
Q 012478 226 VIVARTDSRQALS------------LEESLRRSRAFA-------DAGADVLFIDALASKEEMKAFCEISPLVPKMANMLE 286 (462)
Q Consensus 226 vIiARTDA~~~~g------------ldeAI~RakAy~-------eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~ 286 (462)
+++++|-...... .+...+++..+. ++|.|.+++.+ ++++|++.+.+..|..+. +++
T Consensus 208 ~vvt~tSs~~~~dlq~~~~~~~~~ly~~V~~~a~~~a~~~~~a~~~G~~GvV~GA-Tsp~e~~~iR~~~p~~~i---LtP 283 (342)
T 3n3m_A 208 FVLVKTTNPDSAIFQKNLSLDNKQAYVIMAQEALNMSSYLNLEQNNEFIGFVVGA-NSYDEMNYIRTYFPNCYI---LSP 283 (342)
T ss_dssp EEEEECCSTTTHHHHTTCEETTEEHHHHHHHHHHHHHHHTTTGGGTCCEEEEECT-TCHHHHHHHHHHSTTCCE---EEC
T ss_pred EEEEeCCCCCHHHHHHHhccCCChHHHHHHHHHHHHHHhcccccccCCceEEECC-CCHHHHHHHHHhCCCCeE---EeC
Confidence 9999987643322 222455555554 78999999977 577899888877654332 233
Q ss_pred cCCCCCCCCHHHHHh------cCCCEEeccchHHHH
Q 012478 287 GGGKTPILNPLELEE------LGFKLVAYPLSLIGV 316 (462)
Q Consensus 287 ~~g~tP~ls~~eL~~------lGv~~V~yp~~ll~a 316 (462)
|-| ...=+.++.-. .|-..++.+-..+.+
T Consensus 284 GIG-AQggDq~rv~tp~~a~~~g~~~ivVGR~I~~A 318 (342)
T 3n3m_A 284 GIG-AQNGDLHKTLTNGYHKSYEKILINIGRAITKN 318 (342)
T ss_dssp CSS-TTCCCHHHHHHHHCCSSGGGEEEEECHHHHTS
T ss_pred CCC-cCCCCHHHHHhhhhhhhcCceEEEcChhhhcC
Confidence 211 11225555322 344556666555543
No 400
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=87.71 E-value=2.6 Score=45.26 Aligned_cols=126 Identities=17% Similarity=0.233 Sum_probs=83.2
Q ss_pred CHHHHHHHHHHHHhhcCCcEEEeCCCC----------C-CCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCccc
Q 012478 134 SYGEMVDQGQLITQAVSIPVIGDGDNG----------Y-GNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVV 202 (462)
Q Consensus 134 sl~Eml~~~~~I~ra~~iPVIaD~DtG----------y-G~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lv 202 (462)
..++|....+.+.+.++.|+++=...| | .++....+.++++.+.|+ +|=++ .||-+.
T Consensus 210 gp~~~~~~l~~l~~~~~~p~~vyPNaG~p~~~~~~~~~~~~p~~~a~~~~~~~~~G~---~iiGG----CCGTtP----- 277 (566)
T 1q7z_A 210 GPEEILPIFQELSQYTDKFLVVEPNAGKPIVENGKTVYPLKPHDFAVHIDSYYELGV---NIFGG----CCGTTP----- 277 (566)
T ss_dssp CHHHHHHHHHHHHHTCCSEEEEECCSSSCEEETTEEECCCCHHHHHTTHHHHHHTTC---SEECC----CTTCCH-----
T ss_pred CHHHHHHHHHHHHhcCCCEEEEEcCCCCCcccCCccccCCCHHHHHHHHHHHHHcCC---cEEcc----ccCCCH-----
Confidence 467888888888887777777644333 3 257778888999999994 34477 488542
Q ss_pred CHHHHHHHHHHHHHHHH-----h-------hC------CCeEEEEe-c-----chhh----cccHHHHHHHHHHhHhcCC
Q 012478 203 SREEAVMRIKAAVDARK-----E-------SG------SDIVIVAR-T-----DSRQ----ALSLEESLRRSRAFADAGA 254 (462)
Q Consensus 203 p~ee~~~kI~AA~~Ar~-----~-------~g------~d~vIiAR-T-----DA~~----~~gldeAI~RakAy~eAGA 254 (462)
++++.|+.+++... . .+ ..++|++- . |++. ..+.++++++|+.+.+.||
T Consensus 278 ---~hI~aia~~~~~~~p~~~~~~~~~~~~s~~~~~~~~~~~iiGer~N~Tg~dsf~~~~~~~~~~~a~~~A~~~v~~GA 354 (566)
T 1q7z_A 278 ---EHVKLFRKVLGNRKPLQRKKKRIFAVSSPSKLVTFDHFVVIGERINPAGRKKLWAEMQKGNEEIVIKEAKTQVEKGA 354 (566)
T ss_dssp ---HHHHHHHHHHCSCCCCCCCCCCCCEEECSSCEEESSSCEEEEEEECCTTCHHHHHHHHTTCCHHHHHHHHHHHHTTC
T ss_pred ---HHHHHHHHHhcCCCCCCcccCccceecCCceeeccccceEEEEEecCCCChhHHHHhhcCCHHHHHHHHHHHHHCCC
Confidence 56667766654321 0 00 12445554 2 3321 2357999999999999999
Q ss_pred cEEEec-C---CCCHHHHHHHHHh
Q 012478 255 DVLFID-A---LASKEEMKAFCEI 274 (462)
Q Consensus 255 D~Ifie-~---~~s~eei~~i~~~ 274 (462)
|+|=|- + +...|+++++...
T Consensus 355 diIDIgpg~~~v~~~ee~~rvv~~ 378 (566)
T 1q7z_A 355 EVLDVNFGIESQIDVRYVEKIVQT 378 (566)
T ss_dssp SEEEEECSSGGGSCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCHHHHHHHHHHH
Confidence 999773 2 4567888888754
No 401
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=87.66 E-value=1 Score=45.93 Aligned_cols=86 Identities=17% Similarity=0.173 Sum_probs=52.5
Q ss_pred CCceEeccc---CChHHHHHHHHhCCcEEEeccH-HHHhh---------hccCCCCCCCCHHHHHHHHHHHHhhc--CCc
Q 012478 88 PGVHQGPAC---FDALSAKLVEKSGFSFCFTSGF-SISAA---------RLALPDTGFISYGEMVDQGQLITQAV--SIP 152 (462)
Q Consensus 88 ~~~iv~p~a---yDalSArl~e~aGfdaI~vSG~-avSas---------~lG~PD~g~vsl~Eml~~~~~I~ra~--~iP 152 (462)
+.++++=++ .+.-.|+.++++|+|+|.++|. +...+ ..+..|.+ ++.-+.+..+ +.. ++|
T Consensus 206 ~~PVivK~vg~g~s~e~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g-~pt~~~L~~v----~~~~~~ip 280 (365)
T 3sr7_A 206 QLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWG-QTTAQVLLNA----QPLMDKVE 280 (365)
T ss_dssp CSCEEEEECSSCCCHHHHHHHHHHTCCEEECCCBC--------------CGGGTTCS-CBHHHHHHHH----GGGTTTSE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHcCCCEEEEeCCCCcccchhhcccccccccccccc-ccHHHHHHHH----HHhcCCCe
Confidence 557777777 7888999999999999999853 21110 01122434 3333333322 333 699
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012478 153 VIGDGDNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 153 VIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~I 184 (462)
||+|. |.-+..++. |.+ .+||++|.|
T Consensus 281 via~G--GI~~g~Dv~---KaL-alGAdaV~i 306 (365)
T 3sr7_A 281 ILASG--GIRHPLDII---KAL-VLGAKAVGL 306 (365)
T ss_dssp EEECS--SCCSHHHHH---HHH-HHTCSEEEE
T ss_pred EEEeC--CCCCHHHHH---HHH-HcCCCEEEE
Confidence 99984 344555555 333 489999999
No 402
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=87.65 E-value=1.6 Score=42.10 Aligned_cols=92 Identities=14% Similarity=0.163 Sum_probs=57.0
Q ss_pred CceEecccCChHHHHHHHHhCCcEEEeccHHHHh------h-----------hccCCCCCCC----CHHHHHHHHHHHHh
Q 012478 89 GVHQGPACFDALSAKLVEKSGFSFCFTSGFSISA------A-----------RLALPDTGFI----SYGEMVDQGQLITQ 147 (462)
Q Consensus 89 ~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSa------s-----------~lG~PD~g~v----sl~Eml~~~~~I~r 147 (462)
+..+++.+++.-.+..+.++|++.|.+.||.... . ..|+.+.... .....++.++.+++
T Consensus 125 ~i~l~~~v~~~~~~~~a~~~Gad~I~v~G~~~~g~~~e~~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~ 204 (297)
T 2zbt_A 125 KVPFVCGARNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHD 204 (297)
T ss_dssp SSCEEEEESSHHHHHHHHHTTCSEEEECCCSSSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHH
T ss_pred CceEEeecCCHHHHHHHHHcCCCEEEEcccccCcchHHHHhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHH
Confidence 4566777889888888899999999877642000 0 1233211100 01112345666666
Q ss_pred hcCCcEE--EeCCCCCCCHHHHHHHHHHHHHhCccEEEeCC
Q 012478 148 AVSIPVI--GDGDNGYGNAMNVKRTVKGYIKAGFAGIILED 186 (462)
Q Consensus 148 a~~iPVI--aD~DtGyG~~~nv~rtVk~l~~AGaaGI~IED 186 (462)
..++||+ +|. |-.+..+ ++.+.++||+|+.+=-
T Consensus 205 ~~~~pvi~~a~G--GI~~~e~----i~~~~~aGadgvvvGs 239 (297)
T 2zbt_A 205 HGRLPVVNFAAG--GIATPAD----AALMMHLGMDGVFVGS 239 (297)
T ss_dssp HSSCSSCEEBCS--SCCSHHH----HHHHHHTTCSEEEECG
T ss_pred hcCCCcEEEeeC--CCCCHHH----HHHHHHcCCCEEEEch
Confidence 6789988 664 7666544 4566778999999843
No 403
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=87.59 E-value=0.86 Score=41.19 Aligned_cols=94 Identities=23% Similarity=0.329 Sum_probs=57.5
Q ss_pred HHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeC
Q 012478 78 AKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDG 157 (462)
Q Consensus 78 a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~ 157 (462)
...+++++ .+.++...+++...+..+.+.|+|.+.+++..-+ .+.++....++ +..+.+.+..++||+++.
T Consensus 99 ~~~~~~~~--~~~~~~v~~~t~~e~~~~~~~g~d~i~~~~~~~~---~~~~~~~~~~~----~~l~~l~~~~~~pvia~G 169 (215)
T 1xi3_A 99 IEVAKEIA--PNLIIGASVYSLEEALEAEKKGADYLGAGSVFPT---KTKEDARVIGL----EGLRKIVESVKIPVVAIG 169 (215)
T ss_dssp HHHHHHHC--TTSEEEEEESSHHHHHHHHHHTCSEEEEECSSCC-------CCCCCHH----HHHHHHHHHCSSCEEEES
T ss_pred HHHHHHhC--CCCEEEEecCCHHHHHHHHhcCCCEEEEcCCccC---CCCCCCCCcCH----HHHHHHHHhCCCCEEEEC
Confidence 34566654 4566666788888888888899999998752111 12233222222 334556666689999973
Q ss_pred CCCCCCHHHHHHHHHHHHHhCccEEEeCCC
Q 012478 158 DNGYGNAMNVKRTVKGYIKAGFAGIILEDQ 187 (462)
Q Consensus 158 DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq 187 (462)
|- ++.|+ +++.++|++||.+--.
T Consensus 170 --GI-~~~nv----~~~~~~Ga~gv~vgs~ 192 (215)
T 1xi3_A 170 --GI-NKDNA----REVLKTGVDGIAVISA 192 (215)
T ss_dssp --SC-CTTTH----HHHHTTTCSEEEESHH
T ss_pred --Cc-CHHHH----HHHHHcCCCEEEEhHH
Confidence 22 23344 4566789999988443
No 404
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=87.56 E-value=4.2 Score=41.28 Aligned_cols=145 Identities=16% Similarity=0.195 Sum_probs=89.7
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCC-----CC--CCCCCCcccC----HHHHHHHHHHHHHHH
Q 012478 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPK-----GC--GHTRGRKVVS----REEAVMRIKAAVDAR 218 (462)
Q Consensus 150 ~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PK-----rC--GH~~gk~Lvp----~ee~~~kI~AA~~Ar 218 (462)
.+|+-+-. +..+++.+.+.++++.+.|..++||-=+..+. .+ |...|. ..+ .++.+++|+|++++.
T Consensus 122 ~v~~y~~~--~~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~d~~~v~avR~a~ 198 (401)
T 3sbf_A 122 AIPVYTHA--TSDTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGS-YYDQDQYMDNTLTMFKSLREKY 198 (401)
T ss_dssp SEEEEEEE--EESSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSE-ECCHHHHHHHHHHHHHHHHHHH
T ss_pred eeeEEEeC--CCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccc-cccchHHHHHHHHHHHHHHHHc
Confidence 36664422 23467888889999999999999984322100 00 000111 112 355677888877764
Q ss_pred HhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCC
Q 012478 219 KESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILN 295 (462)
Q Consensus 219 ~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls 295 (462)
|+++.|.. |+.....+++|++-++++.+.|.+. +|-+ .+.+.++++.+.++ +|+.++ +. ..+
T Consensus 199 ---G~d~~l~v--Dan~~~~~~~A~~~~~~L~~~~i~~--iEqP~~~~~~~~~~~l~~~~~-iPIa~d-----E~--~~~ 263 (401)
T 3sbf_A 199 ---GNQFHILH--DVHERLFPNQAIQFAKEVEQYKPYF--IEDILPPNQTEWLDNIRSQSS-VSLGLG-----EL--FNN 263 (401)
T ss_dssp ---TTSSEEEE--ECTTCSCHHHHHHHHHHHGGGCCSC--EECSSCTTCGGGHHHHHTTCC-CCEEEC-----TT--CCS
T ss_pred ---CCCCEEEE--ECCCCCCHHHHHHHHHHHHhcCCCE--EECCCChhHHHHHHHHHhhCC-CCEEeC-----Cc--cCC
Confidence 56776653 6667778999999999999998664 4543 25678888888765 676543 21 234
Q ss_pred HHH---HHhcC-CCEEeccch
Q 012478 296 PLE---LEELG-FKLVAYPLS 312 (462)
Q Consensus 296 ~~e---L~~lG-v~~V~yp~~ 312 (462)
..+ +-+.| +..|..-..
T Consensus 264 ~~~~~~~i~~~~~d~v~~k~~ 284 (401)
T 3sbf_A 264 PEEWKSLIANRRIDFIRCHVS 284 (401)
T ss_dssp HHHHHHHHHTTCCSEECCCGG
T ss_pred HHHHHHHHhcCCCCEEecCcc
Confidence 444 44445 666665444
No 405
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=87.55 E-value=1.7 Score=41.65 Aligned_cols=125 Identities=22% Similarity=0.252 Sum_probs=75.1
Q ss_pred HHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhC
Q 012478 143 QLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESG 222 (462)
Q Consensus 143 ~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g 222 (462)
+.+.+.-=+||+.-- ++..+...++.+.+.|+..|.|--... ...+-|++++++ .
T Consensus 29 ~~l~~~~vv~Vir~~-----~~~~a~~~a~al~~gGi~~iEvt~~t~----------------~a~e~I~~l~~~---~- 83 (232)
T 4e38_A 29 NQLKALKVIPVIAID-----NAEDIIPLGKVLAENGLPAAEITFRSD----------------AAVEAIRLLRQA---Q- 83 (232)
T ss_dssp HHHHHHCEEEEECCS-----SGGGHHHHHHHHHHTTCCEEEEETTST----------------THHHHHHHHHHH---C-
T ss_pred HHHHhCCEEEEEEcC-----CHHHHHHHHHHHHHCCCCEEEEeCCCC----------------CHHHHHHHHHHh---C-
Confidence 344443337887542 345678888999999999999844320 112334433333 2
Q ss_pred CCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHH---H
Q 012478 223 SDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---L 299 (462)
Q Consensus 223 ~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~e---L 299 (462)
++.+|-|-| - .. .++++...+||||.|+.++. +.+. .+.++.. ++|.+. |. .|+.| .
T Consensus 84 ~~~~iGaGT-V---lt----~~~a~~Ai~AGA~fIvsP~~-~~~v-i~~~~~~-gi~~ip------Gv---~TptEi~~A 143 (232)
T 4e38_A 84 PEMLIGAGT-I---LN----GEQALAAKEAGATFVVSPGF-NPNT-VRACQEI-GIDIVP------GV---NNPSTVEAA 143 (232)
T ss_dssp TTCEEEEEC-C---CS----HHHHHHHHHHTCSEEECSSC-CHHH-HHHHHHH-TCEEEC------EE---CSHHHHHHH
T ss_pred CCCEEeECC-c---CC----HHHHHHHHHcCCCEEEeCCC-CHHH-HHHHHHc-CCCEEc------CC---CCHHHHHHH
Confidence 466666655 1 12 55789999999999998875 4444 4445543 355542 21 25544 5
Q ss_pred HhcCCCEEec-cch
Q 012478 300 EELGFKLVAY-PLS 312 (462)
Q Consensus 300 ~~lGv~~V~y-p~~ 312 (462)
.++|++.|-+ |..
T Consensus 144 ~~~Gad~vK~FPa~ 157 (232)
T 4e38_A 144 LEMGLTTLKFFPAE 157 (232)
T ss_dssp HHTTCCEEEECSTT
T ss_pred HHcCCCEEEECcCc
Confidence 6789987765 543
No 406
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=87.53 E-value=8.1 Score=36.35 Aligned_cols=155 Identities=11% Similarity=-0.044 Sum_probs=93.7
Q ss_pred HHHHhhcCCcEEEeCCCCCCCH-HHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhh
Q 012478 143 QLITQAVSIPVIGDGDNGYGNA-MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKES 221 (462)
Q Consensus 143 ~~I~ra~~iPVIaD~DtGyG~~-~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~ 221 (462)
+.+.+..+.||++|.=.+ +. ..+...++.+.+. ++.+.+--.. |. .. + |+++ +.
T Consensus 43 ~~L~~~~g~~VflDlK~~--DIpnTv~~a~~~~~~~-ad~vTvh~~~-----G~---~~------~---~~~~-~~---- 97 (215)
T 3ve9_A 43 KELVGLVDGIKILDLKLA--DIDNTMILIVDELKDI-TNSFIAHAFV-----GV---EG------S---LASL-SQ---- 97 (215)
T ss_dssp HHHHTTCCSEEEEEEEEC--SCHHHHHHHHHHHTTT-CSEEEEEGGG-----CT---TT------T---HHHH-HH----
T ss_pred HHHHHhcCCcEEEEeccc--CchhHHHHHHHHHHHh-hheEEEeCCC-----Cc---HH------H---HHhH-hc----
Confidence 444443479999998875 53 3455667788888 9999883321 10 11 1 1122 11
Q ss_pred CCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCC-CCCHHHHH
Q 012478 222 GSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTP-ILNPLELE 300 (462)
Q Consensus 222 g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP-~ls~~eL~ 300 (462)
+..+++...++..... -+-..++++...++|.|.++..+ +.+++++.+.+..+. ++-+.. |-.| .-++++..
T Consensus 98 ~~~v~vLts~s~~~~~-~~~v~~~a~~a~~~G~~GvV~sa-t~~~e~~~ir~~~~~---f~~v~p--GI~~~g~~~~~a~ 170 (215)
T 3ve9_A 98 RVDLFLVLSMSHPGWN-DAFYPYLREVARRVNPKGFVAPA-TRPSMISRVKGDFPD---KLVISP--GVGTQGAKPGIAL 170 (215)
T ss_dssp HSEEEEECCCSSTTCC-GGGHHHHHHHHHHHCCSEEECCT-TSHHHHHHHHHHCTT---SEEEEC--CTTSTTCCTTHHH
T ss_pred CCCEEEEEecCCcchH-HHHHHHHHHHHHHcCCCceeeCC-CCHHHHHHHHHhCCC---cEEEcC--CCCcCcCCHHHHH
Confidence 2346676776653211 13356678888899999988754 346788888877653 222322 3333 23678888
Q ss_pred hcCCCEEeccchHHHHH--HHHHHHHHHHHH
Q 012478 301 ELGFKLVAYPLSLIGVS--VRAMQDALTAIK 329 (462)
Q Consensus 301 ~lGv~~V~yp~~ll~aa--~~Am~~~l~~l~ 329 (462)
+.|.+.++.|-..+.+. ..+++...+++.
T Consensus 171 ~~Gad~iVvGr~I~~a~dp~~a~~~i~~~i~ 201 (215)
T 3ve9_A 171 CHGADYEIVGRSVYQSADPVRKLEEIVRSQE 201 (215)
T ss_dssp HTTCSEEEECHHHHTSSSHHHHHHHHHHHHH
T ss_pred HcCCCEEEeCHHHcCCCCHHHHHHHHHHHHH
Confidence 99999999988877652 334444444443
No 407
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=87.52 E-value=25 Score=35.30 Aligned_cols=212 Identities=13% Similarity=0.121 Sum_probs=133.1
Q ss_pred HHHHHHHHhCCCceEecccCChHHHHH----HHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhh-cCCc
Q 012478 78 AKSLRQILELPGVHQGPACFDALSAKL----VEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQA-VSIP 152 (462)
Q Consensus 78 a~~LR~ll~~~~~iv~p~ayDalSArl----~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra-~~iP 152 (462)
.+-|....+.+--+-+.|+++.-+++. +++.+.+.|+-.+-+.. ...| .+.+...++..++. .++|
T Consensus 7 ~~ll~~A~~~~yAV~AfNv~n~e~~~Ail~AAee~~sPvIlq~s~g~~-~y~g--------~~~~~~~v~~aa~~~~~VP 77 (323)
T 2isw_A 7 RQMLGEARKHKYGVGAFNVNNMEQIQGIMKAVVQLKSPVILQCSRGAL-KYSD--------MIYLKKLCEAALEKHPDIP 77 (323)
T ss_dssp HHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHHTTCCEEEEEEHHHH-HHTT--------THHHHHHHHHHHHHCTTSC
T ss_pred HHHHHHHHHCCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChhHH-HhCC--------HHHHHHHHHHHHHhcCCCc
Confidence 344566666666688889999888754 45668998887764422 2333 23333444555555 7899
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEE----
Q 012478 153 VIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV---- 228 (462)
Q Consensus 153 VIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIi---- 228 (462)
|+.=.|+|. + .+.+++.+++|...|.| |.. | .|.||=++.-+..++.....| ..|=
T Consensus 78 ValHlDHg~-~----~e~i~~ai~~GFtSVMi-DgS------~------~p~eENi~~Tk~vv~~ah~~g--vsVEaELG 137 (323)
T 2isw_A 78 ICIHLDHGD-T----LESVKMAIDLGFSSVMI-DAS------H------HPFDENVRITKEVVAYAHARS--VSVEAELG 137 (323)
T ss_dssp EEEEEEEEC-S----HHHHHHHHHTTCSEEEE-CCT------T------SCHHHHHHHHHHHHHHHHTTT--CEEEEEES
T ss_pred EEEECCCCC-C----HHHHHHHHHcCCCeEEe-cCC------C------CCHHHHHHHHHHHHHHHHHcC--CeEEEEeC
Confidence 999999983 3 34467788999999999 442 3 366777777777776665322 1111
Q ss_pred --Eecc----hh-hcccHHHHHHHHHHhH-hcCCcEEEe-----cCC------C----CHHHHHHHHHhCCCCceeeeee
Q 012478 229 --ARTD----SR-QALSLEESLRRSRAFA-DAGADVLFI-----DAL------A----SKEEMKAFCEISPLVPKMANML 285 (462)
Q Consensus 229 --ARTD----A~-~~~gldeAI~RakAy~-eAGAD~Ifi-----e~~------~----s~eei~~i~~~v~~vP~~~N~l 285 (462)
+-.+ .. .-.+-+| |+.|. +.|+|++-+ +|. + +.+.++++.+.++ +|+. +
T Consensus 138 ~vgg~Ed~v~~~~~yTdPee----a~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~~-vpLV---l 209 (323)
T 2isw_A 138 TLGGIEEDVQNTVQLTEPQD----AKKFVELTGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLTG-IPLV---M 209 (323)
T ss_dssp CC----------CCCCCHHH----HHHHHHHHCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHHC-SCEE---E
T ss_pred CccCCccCcccccccCCHHH----HHHHHHHHCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHhC-CCeE---E
Confidence 1100 00 0123343 44444 689998864 222 1 2357888887774 5653 4
Q ss_pred ecCCCCC------------------CCCHHHHH---hcCCCEEeccchHHHHHHHHHHHHHH
Q 012478 286 EGGGKTP------------------ILNPLELE---ELGFKLVAYPLSLIGVSVRAMQDALT 326 (462)
Q Consensus 286 ~~~g~tP------------------~ls~~eL~---~lGv~~V~yp~~ll~aa~~Am~~~l~ 326 (462)
.|+...| .++.++++ ++|+.-|-+..-+..+...++++.+.
T Consensus 210 HGgSsvp~~~~~~~~~~gg~~~~~~Gvp~e~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~ 271 (323)
T 2isw_A 210 HGSSSVPKDVKDMINKYGGKMPDAVGVPIESIVHAIGEGVCKINVDSDSRMAMTGAIRKVFV 271 (323)
T ss_dssp CSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHhccccccCCCCCHHHHHHHHHCCCeEEEEChHHHHHHHHHHHHHHH
Confidence 5432112 46667666 68999999999999999999988864
No 408
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=87.43 E-value=7 Score=39.44 Aligned_cols=142 Identities=14% Similarity=0.064 Sum_probs=80.0
Q ss_pred HHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEE--EEecchh-hcccH------
Q 012478 169 RTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVI--VARTDSR-QALSL------ 239 (462)
Q Consensus 169 rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vI--iARTDA~-~~~gl------ 239 (462)
-.|+++.+.||++|++==...| +...- -.+++.+.|..+.+++++.|-+|++ +.+-... ...+.
T Consensus 114 ~sve~a~~~GADAVk~lv~~g~------d~~~e-~~~~q~~~l~rv~~ec~~~GiPlllEil~y~~~~~~~~~~~~a~~~ 186 (332)
T 3iv3_A 114 WSIKRLKEAGADAVKFLLYYDV------DGDPQ-VNVQKQAYIERIGSECQAEDIPFFLEILTYDETISNNSSVEFAKVK 186 (332)
T ss_dssp CCHHHHHHTTCSEEEEEEEECT------TSCHH-HHHHHHHHHHHHHHHHHHHTCCEEEEEEECBTTBSCTTSHHHHTTH
T ss_pred cCHHHHHHcCCCEEEEEEEcCC------CchHH-HHHHHHHHHHHHHHHHHHcCCceEEEEeccCCCCCCCcchhhhccC
Confidence 3478888999999998433211 11100 0125667777777777777888887 6543211 11111
Q ss_pred HH-HHHHHHHh--HhcCCcEEEecCCCCH---------------HH----HHHHHHhCCCCceeeeeeecCCCCCCCC--
Q 012478 240 EE-SLRRSRAF--ADAGADVLFIDALASK---------------EE----MKAFCEISPLVPKMANMLEGGGKTPILN-- 295 (462)
Q Consensus 240 de-AI~RakAy--~eAGAD~Ifie~~~s~---------------ee----i~~i~~~v~~vP~~~N~l~~~g~tP~ls-- 295 (462)
.+ .+.-++.+ .+.|||++=++-+-+. ++ ++++++.. |+|+-++.+ |.+...-
T Consensus 187 p~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~---~~P~v~lsg-G~~~~~fl~ 262 (332)
T 3iv3_A 187 VHKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEAST---DLPYIYLSA-GVSAELFQE 262 (332)
T ss_dssp HHHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTC---SSCEEEECT-TCCHHHHHH
T ss_pred HHHHHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcC---CCCEEEECC-CCCHHHHHH
Confidence 22 33445556 5779999999865433 23 44555543 344434554 4322111
Q ss_pred -HHHHHhcCC--CEEeccchHHHHHHHHH
Q 012478 296 -PLELEELGF--KLVAYPLSLIGVSVRAM 321 (462)
Q Consensus 296 -~~eL~~lGv--~~V~yp~~ll~aa~~Am 321 (462)
++.-.+.|. +=|++|-..+..++...
T Consensus 263 ~v~~A~~aGa~f~Gv~~GRnvwq~~v~~~ 291 (332)
T 3iv3_A 263 TLVFAHKAGAKFNGVLCGRATWAGSVQVY 291 (332)
T ss_dssp HHHHHHHHTCCCCEEEECHHHHTTHHHHH
T ss_pred HHHHHHHcCCCcceEEeeHHHHHhhhhhh
Confidence 223344565 99999988887766553
No 409
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=87.43 E-value=1.1 Score=44.41 Aligned_cols=102 Identities=20% Similarity=0.242 Sum_probs=53.8
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHH
Q 012478 161 YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (462)
Q Consensus 161 yG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gld 240 (462)
|.+...+.+.++++++.||+-|=|-.+.. ..|-+-++.+|-++|+.-++++-.+. ++.|-- |....
T Consensus 48 ~~~~~~a~~~a~~~v~~GAdIIDIGgeST------rPga~~v~~~eE~~Rv~pvI~~l~~~--~vpiSI--DT~~~---- 113 (294)
T 2dqw_A 48 YLDPERALERAREMVAEGADILDLGAEST------RPGAAPVPVEEEKRRLLPVLEAVLSL--GVPVSV--DTRKP---- 113 (294)
T ss_dssp -----CCHHHHHHHHHHTCSEEEEECC-----------------CCHHHHHHHHHHHHHTT--CSCEEE--ECSCH----
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCcC------CCCCCCCCHHHHHHHHHHHHHHHHhC--CCeEEE--ECCCH----
Confidence 33455677778899999999998865431 12334566666677777777765532 443332 33322
Q ss_pred HHHHHHHHhHhcCCcEEE-ecCCCCHHHHHHHHHhCCCCcee
Q 012478 241 ESLRRSRAFADAGADVLF-IDALASKEEMKAFCEISPLVPKM 281 (462)
Q Consensus 241 eAI~RakAy~eAGAD~If-ie~~~s~eei~~i~~~v~~vP~~ 281 (462)
++ +++..++|||+|- +.+..+ +++..+++... .|..
T Consensus 114 ~V---a~aAl~aGa~iINdVsg~~d-~~m~~v~a~~~-~~vV 150 (294)
T 2dqw_A 114 EV---AEEALKLGAHLLNDVTGLRD-ERMVALAARHG-VAAV 150 (294)
T ss_dssp HH---HHHHHHHTCSEEECSSCSCC-HHHHHHHHHHT-CEEE
T ss_pred HH---HHHHHHhCCCEEEECCCCCC-hHHHHHHHHhC-CCEE
Confidence 22 3344456999885 344444 56677776654 4544
No 410
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=87.40 E-value=1.8 Score=42.05 Aligned_cols=136 Identities=18% Similarity=0.087 Sum_probs=88.0
Q ss_pred ecccCC---hHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhc---CCc--EEEeCCC---CC
Q 012478 93 GPACFD---ALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV---SIP--VIGDGDN---GY 161 (462)
Q Consensus 93 ~p~ayD---alSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~---~iP--VIaD~Dt---Gy 161 (462)
+|.=|- .-+++.+.++|+.+|-+=+.. +.+...+++.+||++.++.++++. ++| |++=.|. |.
T Consensus 87 ~~~Gyg~~~~~~~~~l~~aGa~gv~iEd~~------~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~ 160 (255)
T 2qiw_A 87 VESGYGLSPADLIAQILEAGAVGINVEDVV------HSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGA 160 (255)
T ss_dssp CTTCTTCCHHHHHHHHHHTTCCEEEECSEE------GGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCT
T ss_pred cCCCcCcHHHHHHHHHHHcCCcEEEECCCC------CCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccC
Confidence 454462 556666677999999887522 234557899999999999998763 577 7776663 44
Q ss_pred CC----HHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchh-hc
Q 012478 162 GN----AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSR-QA 236 (462)
Q Consensus 162 G~----~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~-~~ 236 (462)
++ ...+.+-.+.|++|||.+|.+|.- |..+.+.+|...+ ..+..++...... ..
T Consensus 161 ~~~~~~~~~ai~ra~a~~eAGAd~i~~e~~---------------~~~~~~~~i~~~~------~~P~n~~~~~~~~~p~ 219 (255)
T 2qiw_A 161 DVFEDPMVEAIKRIKLMEQAGARSVYPVGL---------------STAEQVERLVDAV------SVPVNITAHPVDGHGA 219 (255)
T ss_dssp TTSSSHHHHHHHHHHHHHHHTCSEEEECCC---------------CSHHHHHHHHTTC------SSCBEEECBTTTBBTT
T ss_pred CcchHHHHHHHHHHHHHHHcCCcEEEEcCC---------------CCHHHHHHHHHhC------CCCEEEEecCCCCCCC
Confidence 42 456777778999999999999873 1124445553322 2345555433220 01
Q ss_pred ccHHHHHHHHHHhHhcCCcEEEecCC
Q 012478 237 LSLEESLRRSRAFADAGADVLFIDAL 262 (462)
Q Consensus 237 ~gldeAI~RakAy~eAGAD~Ifie~~ 262 (462)
.. ...+.++|...|.....
T Consensus 220 ~~-------~~eL~~lGv~~v~~~~~ 238 (255)
T 2qiw_A 220 GD-------LATLAGLGVRRVTFGPL 238 (255)
T ss_dssp BC-------HHHHHHTTCCEEECTTH
T ss_pred CC-------HHHHHHcCCCEEEEHHH
Confidence 12 45677899998887654
No 411
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=87.37 E-value=3.7 Score=40.89 Aligned_cols=152 Identities=18% Similarity=0.082 Sum_probs=0.0
Q ss_pred HHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcC-CcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012478 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVS-IPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (462)
Q Consensus 102 Arl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~-iPVIaD~DtGyG~~~nv~rtVk~l~~AGaa 180 (462)
|+.+.++|++.|=++... .+-.++ +.++.|++... ..+.+=.. ++...+.++++.+..+|+.
T Consensus 34 a~~L~~~Gv~~IE~g~p~-------------~~~~d~-e~v~~i~~~~~~~~i~~l~r---~~~~~i~~a~~al~~ag~~ 96 (325)
T 3eeg_A 34 AKALDELGVDVIEAGFPV-------------SSPGDF-NSVVEITKAVTRPTICALTR---AKEADINIAGEALRFAKRS 96 (325)
T ss_dssp HHHHHHHTCSEEEEECTT-------------SCHHHH-HHHHHHHHHCCSSEEEEECC---SCHHHHHHHHHHHTTCSSE
T ss_pred HHHHHHcCCCEEEEeCCC-------------CCHhHH-HHHHHHHHhCCCCEEEEeec---CCHHHHHHHHHhhcccCCC
Q ss_pred EEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEec
Q 012478 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFID 260 (462)
Q Consensus 181 GI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie 260 (462)
-|+|-+..++- |...+-=.+.+|.+++++.+++..++.|..+.+-+=..... ..+..++-++++.++|||.|.+.
T Consensus 97 ~v~i~~s~Sd~---~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~~~--~~~~~~~~~~~~~~~G~~~i~l~ 171 (325)
T 3eeg_A 97 RIHTGIGSSDI---HIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAGRA--DQAFLARMVEAVIEAGADVVNIP 171 (325)
T ss_dssp EEEEEEECSHH---HHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEETGGGS--CHHHHHHHHHHHHHHTCSEEECC
T ss_pred EEEEEecccHH---HHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEccccccc--hHHHHHHHHHHHHhcCCCEEEec
Q ss_pred ---CCCCHHHHHHHHHhC
Q 012478 261 ---ALASKEEMKAFCEIS 275 (462)
Q Consensus 261 ---~~~s~eei~~i~~~v 275 (462)
|.-+++++.++.+.+
T Consensus 172 DT~G~~~P~~v~~lv~~l 189 (325)
T 3eeg_A 172 DTTGYMLPWQYGERIKYL 189 (325)
T ss_dssp BSSSCCCHHHHHHHHHHH
T ss_pred CccCCcCHHHHHHHHHHH
No 412
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=87.35 E-value=27 Score=35.44 Aligned_cols=222 Identities=11% Similarity=-0.004 Sum_probs=130.6
Q ss_pred HHHHHHhCCCceEecccCChHHHHHH----HHhCCcEEEeccHHHHhhhccCCCCCC--CCHHHHHHHHHHHHhhcCCcE
Q 012478 80 SLRQILELPGVHQGPACFDALSAKLV----EKSGFSFCFTSGFSISAARLALPDTGF--ISYGEMVDQGQLITQAVSIPV 153 (462)
Q Consensus 80 ~LR~ll~~~~~iv~p~ayDalSArl~----e~aGfdaI~vSG~avSas~lG~PD~g~--vsl~Eml~~~~~I~ra~~iPV 153 (462)
-|....+.+--+-+.|+++.-+++.+ ++.+.+.|+-.+-+.. ...|...... .....+...++.+++..++||
T Consensus 12 ll~~A~~~~yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~-~y~~g~~~~~~v~g~~~~a~~v~~~A~~~~VPV 90 (349)
T 3elf_A 12 MLGQAKQNSYAFPAINCTSSETVNAAIKGFADAGSDGIIQFSTGGA-EFGSGLGVKDMVTGAVALAEFTHVIAAKYPVNV 90 (349)
T ss_dssp HHHHHHHTTCCEEEEECCSHHHHHHHHHHHHHTTCCEEEEECHHHH-HHHHCTTTCCHHHHHHHHHHHHHHHHTTSSSCE
T ss_pred HHHHHHHcCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhHH-hhcCcchhhhhhhhHHHHHHHHHHHHHHCCCCE
Confidence 34444445556788899998887654 6678998886543322 1222221111 123556777888888889999
Q ss_pred EEeCCCCCCCH---------HHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCC
Q 012478 154 IGDGDNGYGNA---------MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSD 224 (462)
Q Consensus 154 IaD~DtGyG~~---------~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d 224 (462)
+.=.|.|.... ....+.++.-+++|...|.| |.. | .|.||=++.-+..++.....|
T Consensus 91 aLHlDHg~~~~ld~~~~~~l~~~~~~i~~~i~~GFtSVMi-DgS------~------lp~eENi~~Tk~vv~~ah~~g-- 155 (349)
T 3elf_A 91 ALHTDHCPKDKLDSYVRPLLAISAQRVSKGGNPLFQSHMW-DGS------A------VPIDENLAIAQELLKAAAAAK-- 155 (349)
T ss_dssp EEEECCCCGGGGGGTHHHHHHHHHHHHHTTCCCSCSEEEE-CCT------T------SCHHHHHHHHHHHHHHHHHTT--
T ss_pred EEECCCCCCcccchhhhhhHHHHHHHHHHHhhcCCCEEEe-cCC------C------CCHHHHHHHHHHHHHHHHHcC--
Confidence 99999995311 12345555555668999999 542 2 367776766666666655322
Q ss_pred eEEEE---ec----chh-------hcccHHHHHHHHHHhH-hcC-----CcEEEe-----cCCC-------CHHHHHHHH
Q 012478 225 IVIVA---RT----DSR-------QALSLEESLRRSRAFA-DAG-----ADVLFI-----DALA-------SKEEMKAFC 272 (462)
Q Consensus 225 ~vIiA---RT----DA~-------~~~gldeAI~RakAy~-eAG-----AD~Ifi-----e~~~-------s~eei~~i~ 272 (462)
.-|=| ++ |.. .-...+| |+.|. +.| +|++-+ +|.- +.+.++++.
T Consensus 156 vsVEaElG~iGG~Edgv~~~~~~~~yT~Pee----a~~Fv~~tg~~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~I~ 231 (349)
T 3elf_A 156 IILEIEIGVVGGEEDGVANEINEKLYTSPED----FEKTIEALGAGEHGKYLLAATFGNVHGVYKPGNVKLRPDILAQGQ 231 (349)
T ss_dssp CEEEEEESCCBC-------------CCCHHH----HHHHHHHHTTSTTSCEEEEECSSCBSSCCCTTSSCCCTHHHHHHH
T ss_pred CeEEEEeeccccccCCcccccccccCCCHHH----HHHHHHHhCCCCCCceEEEEecCCcccCCCCCCCccCHHHHHHHH
Confidence 11111 11 100 0012344 44443 456 898764 2321 345666666
Q ss_pred HhC----C------CCceeeeeeecCCCCCCCCHHHH---HhcCCCEEeccchHHHHHHHHHHHHHHH
Q 012478 273 EIS----P------LVPKMANMLEGGGKTPILNPLEL---EELGFKLVAYPLSLIGVSVRAMQDALTA 327 (462)
Q Consensus 273 ~~v----~------~vP~~~N~l~~~g~tP~ls~~eL---~~lGv~~V~yp~~ll~aa~~Am~~~l~~ 327 (462)
+.+ . .+|+ ++.|+. .++.+++ -++|+.-|-+..-+..+...++++.+..
T Consensus 232 ~~v~~~~~~~~~~~~vpL---VlHGgS---G~p~e~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~~ 293 (349)
T 3elf_A 232 QVAAAKLGLPADAKPFDF---VFHGGS---GSLKSEIEEALRYGVVKMNVDTDTQYAFTRPIAGHMFT 293 (349)
T ss_dssp HHHHHHHTCCTTCCCCCE---EECCCT---TCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCccccCCCcE---EEeCCC---CCCHHHHHHHHHcCCEEEEcchHHHHHHHHHHHHHHHh
Confidence 543 1 2443 345432 3455555 4679999999999999999999988764
No 413
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=87.32 E-value=27 Score=35.49 Aligned_cols=229 Identities=10% Similarity=0.007 Sum_probs=129.9
Q ss_pred HHHHHHHHhCCCceEecccCChHHHHH----HHHhCCcEEEeccHHHHhhhc--cCCCC-CC----CCHHHHHHHHHHHH
Q 012478 78 AKSLRQILELPGVHQGPACFDALSAKL----VEKSGFSFCFTSGFSISAARL--ALPDT-GF----ISYGEMVDQGQLIT 146 (462)
Q Consensus 78 a~~LR~ll~~~~~iv~p~ayDalSArl----~e~aGfdaI~vSG~avSas~l--G~PD~-g~----vsl~Eml~~~~~I~ 146 (462)
.+-|....+.+--+-+.|+++.-+++. +++.+.+.|+-.+-+.+.... |++.. .. ...-.+..+++.++
T Consensus 18 ~~ll~~A~~~~yAVpAfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~~~~g~~~~~~~~~~~~i~ga~~~~~~v~~~A 97 (358)
T 1dos_A 18 QKVFQVAKENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMA 97 (358)
T ss_dssp HHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHHHTCCEEEEECHHHHHHHHCTTSCCCSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChhHHHHhcCCCccccchhhhHHHhHHHHHHHHHHHH
Confidence 334555555565688889999888754 456689988877544322222 33321 00 00112456777778
Q ss_pred hhcCCcEEEeCCCCCCC----HHHHHHHH----HHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHH
Q 012478 147 QAVSIPVIGDGDNGYGN----AMNVKRTV----KGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDAR 218 (462)
Q Consensus 147 ra~~iPVIaD~DtGyG~----~~nv~rtV----k~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar 218 (462)
+..++||+.=.|+|... ...+.+.. +...++|...|.| |.. | .|.||=++.-+..++..
T Consensus 98 ~~~~VPVaLHlDHg~~~~~~~i~~~i~a~~~~~~~~~~~gFtSVMi-DgS------~------~p~eENI~~Tkevv~~a 164 (358)
T 1dos_A 98 EHYGVPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMI-DLS------E------ESLQENIEICSKYLERM 164 (358)
T ss_dssp HHHTCEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHSSCSCSEEEE-CCT------T------SCHHHHHHHHHHHHHHH
T ss_pred HHCCCCEEEECCCCCCccHHHHHHHHHHHHHHHHhcccCCCceEee-cCC------C------CCHHHHHHHHHHHHHHH
Confidence 88899999999999542 12233332 2223356999999 542 3 36777676666666665
Q ss_pred HhhCC----CeEEEEe-cchhh---------cccHHHHHHHHHHhHhc--CCc---EEEe-----cCCC-------CHHH
Q 012478 219 KESGS----DIVIVAR-TDSRQ---------ALSLEESLRRSRAFADA--GAD---VLFI-----DALA-------SKEE 267 (462)
Q Consensus 219 ~~~g~----d~vIiAR-TDA~~---------~~gldeAI~RakAy~eA--GAD---~Ifi-----e~~~-------s~ee 267 (462)
...|. ++=.++- -|... -..-+ .|..|.+. |.| ++-+ +++- +.+.
T Consensus 165 h~~gvsVEaELG~vGG~EDgv~~~~~~~~~~yT~Pe----ea~~fv~~ttgvd~~d~LAvaiGt~HG~Yk~g~p~L~~~~ 240 (358)
T 1dos_A 165 SKIGMTLEIELGCTGGEEDGVDNSHMDASALYTQPE----DVDYAYTELSKISPRFTIAASFGNVHGVYKAGNVVLTPTI 240 (358)
T ss_dssp HHTTCEEEEECCCCCCCCCCCSCCCCCCCCCSCCHH----HHHHHHHHHHTTCSCEEEECCSSCCCSSCCCSCCCCCTHH
T ss_pred HHcCCEEEEEeccccCcCCCccccccccccccCCHH----HHHHHHHHhcCCChhceEEEecccccCccCCCCCCcCHHH
Confidence 53220 0101111 11100 02233 46666655 788 5543 2221 3456
Q ss_pred HHHHHHh------CCCCceeeeeeecCCCCCCCCHHHHH---hcCCCEEeccchHHHHHHHHHHHHHHH
Q 012478 268 MKAFCEI------SPLVPKMANMLEGGGKTPILNPLELE---ELGFKLVAYPLSLIGVSVRAMQDALTA 327 (462)
Q Consensus 268 i~~i~~~------v~~vP~~~N~l~~~g~tP~ls~~eL~---~lGv~~V~yp~~ll~aa~~Am~~~l~~ 327 (462)
++++.+. ++.+|+++ ++.|+. .++.++++ ++|+.-|-+..-+..+...++++.+..
T Consensus 241 L~~i~~~i~~~~g~~~~~vpL-VlHGgS---G~~~e~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~~ 305 (358)
T 1dos_A 241 LRDSQEYVSKKHNLPHNSLNF-VFHGGS---GSTAQEIKDSVSYGVVKMNIDTDTQWATWEGVLNYYKA 305 (358)
T ss_dssp HHHHHHHHHHHHTCCTTCSCE-EECSCT---TCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCcE-EEeCCC---CCCHHHHHHHHHCCCeEEEEcHHHHHHHHHHHHHHHHh
Confidence 6666543 12223332 345422 35666655 689999999999999999999988754
No 414
>3qm3_A Fructose-bisphosphate aldolase; structural genomics, center for structural genomics of infec diseases, csgid, TIM beta/alpha-barrel, lyase; 1.85A {Campylobacter jejuni} SCOP: c.1.10.2
Probab=87.28 E-value=28 Score=35.47 Aligned_cols=233 Identities=12% Similarity=-0.012 Sum_probs=129.3
Q ss_pred chHHHHHHHHhCCCceEecccCChHHHHH----HHHhCCcEEEeccHHHHhhhccCCCC--CCCCHHHHHHHHHHHHhhc
Q 012478 76 SPAKSLRQILELPGVHQGPACFDALSAKL----VEKSGFSFCFTSGFSISAARLALPDT--GFISYGEMVDQGQLITQAV 149 (462)
Q Consensus 76 ~~a~~LR~ll~~~~~iv~p~ayDalSArl----~e~aGfdaI~vSG~avSas~lG~PD~--g~vsl~Eml~~~~~I~ra~ 149 (462)
...+-|....+.+--+-+.|+++.-+++. +|+.+.+.|+-.+-+.+...-|.+-. ..+..-.+..+++.+++..
T Consensus 19 ~~~~ll~~A~~~~yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~~~~g~~~~~~~~~ga~~~a~~v~~~A~~~ 98 (357)
T 3qm3_A 19 ELNKIYDYAKAEGFAIPAVNVVGTDSINAVLEAAKKVNSPVIIQFSNGGAKFYAGKNCPNGEVLGAISGAKHVHLLAKAY 98 (357)
T ss_dssp GHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHHTSCEEEEECHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhccCccchhhHHHHHHHHHHHHHHHHHHC
Confidence 33444555555555688889999888765 46678998886543322111232110 0111123455677778888
Q ss_pred CCcEEEeCCCCCCC-H---HHHHHH----HHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhh
Q 012478 150 SIPVIGDGDNGYGN-A---MNVKRT----VKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKES 221 (462)
Q Consensus 150 ~iPVIaD~DtGyG~-~---~nv~rt----Vk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~ 221 (462)
++||+.=.|+|... . ..+.+. +++.+++|...|.| |.. | .|.||=+++-+..++.....
T Consensus 99 ~VPVaLHlDHg~~~~~~~i~~~i~a~~~~~~~~~~~GFtSVMi-DgS------~------lp~eENI~~Tk~vv~~ah~~ 165 (357)
T 3qm3_A 99 GVPVILHTDHAARKLLPWIDGLIEANAQYKKTHGQALFSSHML-DLS------E------ESLEENLSTCEVYLQKLDAL 165 (357)
T ss_dssp TCEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHSSCSCSEEEC-CCT------T------SCHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEECCCCCccchHHHHHHHHHhHHHHhhhcCCCCCEEEE-eCC------C------CCHHHHHHHHHHHHHHHHHc
Confidence 99999999999532 1 222222 33444678999999 542 3 36777777766666665533
Q ss_pred CCCeEEE------Eec-chhh---------cccHHHHHHHHHHhHh-cC----CcEEEe-----cCCC-------CHHHH
Q 012478 222 GSDIVIV------ART-DSRQ---------ALSLEESLRRSRAFAD-AG----ADVLFI-----DALA-------SKEEM 268 (462)
Q Consensus 222 g~d~vIi------ART-DA~~---------~~gldeAI~RakAy~e-AG----AD~Ifi-----e~~~-------s~eei 268 (462)
| .-|= +-. |... -...+| |+.|.+ .| .|++-+ ++.- +.+.+
T Consensus 166 g--vsVEaELG~igG~Edgv~~~~~~~~~~yT~Pee----a~~Fv~~tg~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L 239 (357)
T 3qm3_A 166 G--VALEIELGCTGGEEDGVDNTGIDNSKLYTQPED----VALAYERLGKISDKFSIAASFGNVHGVYKPGNVSLQPEIL 239 (357)
T ss_dssp T--CEEEEECCCCCC-----CCSSTTCTTTSCCHHH----HHHHHHHHTTTCSCEEEECCSSCCCSSCCSSCCCCCTHHH
T ss_pred C--CeEEEEeeeeccccCCccccccccccccCCHHH----HHHHHHHhCCCCcccEEEEecCCccCCcCCCCCCCCHHHH
Confidence 2 1111 111 1100 023344 445554 23 566653 2321 34556
Q ss_pred HHHHH----hC--CC-CceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHHHHHHHHHHHHHHH
Q 012478 269 KAFCE----IS--PL-VPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVSVRAMQDALTAI 328 (462)
Q Consensus 269 ~~i~~----~v--~~-vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~aa~~Am~~~l~~l 328 (462)
+++.+ .+ +. .|+++ ++.|+...|.=.+.+.-++|+.-|-+..-+..+...++++.+..=
T Consensus 240 ~~i~~~i~~~~~~~~~~~vpL-VlHGgSG~p~e~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~~~ 305 (357)
T 3qm3_A 240 KNSQKFVKDKFALNSDKPINF-VFHGGSGSELKDIKNAVSYGVIKMNIDTDTQWAFWDGVREYELKN 305 (357)
T ss_dssp HHHHHHHHHHTTCSCSCCSCE-EECSCTTCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccCCCCcE-EEeCCCCCCHHHHHHHHHCCceEEEechHHHHHHHHHHHHHHHhC
Confidence 65543 22 11 12222 345432233223344556799999999999999999999987653
No 415
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=87.22 E-value=2.8 Score=43.40 Aligned_cols=90 Identities=13% Similarity=0.159 Sum_probs=55.7
Q ss_pred CCceEecccCChHHHHHHHHhCCcEEEec-cHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHH
Q 012478 88 PGVHQGPACFDALSAKLVEKSGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMN 166 (462)
Q Consensus 88 ~~~iv~p~ayDalSArl~e~aGfdaI~vS-G~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~n 166 (462)
+-+++.-++-+.-.|+.+.++|+++|.+| |.+......-+.+.+ .+.-+.+..+...++..++|||+|. |..+..+
T Consensus 274 ~~pvi~G~v~t~~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~-~p~~~~l~~~~~~~~~~~ipvia~G--Gi~~~~d 350 (491)
T 1zfj_A 274 NRTLIAGNIATAEGARALYDAGVDVVKVGIGPGSICTTRVVAGVG-VPQVTAIYDAAAVAREYGKTIIADG--GIKYSGD 350 (491)
T ss_dssp SSCEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCC-CCHHHHHHHHHHHHHHTTCEEEEES--CCCSHHH
T ss_pred CCcEeCCCccCHHHHHHHHHcCCCEEEECccCCcceEEeeecCCC-CCcHHHHHHHHHHHhhcCCCEEeeC--CCCCHHH
Confidence 34566778888889999999999999997 211100000111222 3333444444445556789999883 4445555
Q ss_pred HHHHHHHHHHhCccEEEe
Q 012478 167 VKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 167 v~rtVk~l~~AGaaGI~I 184 (462)
+. ++.++||++|.+
T Consensus 351 i~----kal~~GA~~v~v 364 (491)
T 1zfj_A 351 IV----KALAAGGNAVML 364 (491)
T ss_dssp HH----HHHHTTCSEEEE
T ss_pred HH----HHHHcCCcceee
Confidence 55 334689999999
No 416
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=87.15 E-value=5.9 Score=38.15 Aligned_cols=171 Identities=12% Similarity=0.060 Sum_probs=95.3
Q ss_pred HHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012478 105 VEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 105 ~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~I 184 (462)
+.++|.|+|.++| ...++.+.+.+.+++|.+ .++||+. ++. ++..+ ..|++|+.+
T Consensus 32 ~~~~GtDaI~vGg------------s~gvt~~~~~~~v~~ik~-~~~Piil-~p~---~~~~~--------~~gaD~il~ 86 (235)
T 3w01_A 32 ICMSQTDAIMIGG------------TDDVTEDNVIHLMSKIRR-YPLPLVL-EIS---NIESV--------MPGFDFYFV 86 (235)
T ss_dssp HHTSSCSEEEECC------------SSCCCHHHHHHHHHHHTT-SCSCEEE-ECC---CSTTC--------CTTCSEEEE
T ss_pred HHHcCCCEEEECC------------cCCcCHHHHHHHHHHhcC-cCCCEEE-ecC---CHHHh--------hcCCCEEEE
Confidence 4578999999999 233799999999999988 8999988 332 33222 359999999
Q ss_pred CCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHH-----h-hCCCeEEEEecchhh-------cccHHHHHHHHH-HhH
Q 012478 185 EDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARK-----E-SGSDIVIVARTDSRQ-------ALSLEESLRRSR-AFA 250 (462)
Q Consensus 185 EDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~-----~-~g~d~vIiARTDA~~-------~~gldeAI~Rak-Ay~ 250 (462)
=|=.. -+. ...+- .. .++++++... + ....++|++-+-+.+ ....+++...|. +-.
T Consensus 87 pslln-~~~-----~~~i~-g~---~~~a~~~~gl~~~~~e~i~~gYivv~p~s~v~~v~~a~~~~~~e~iaa~A~~a~~ 156 (235)
T 3w01_A 87 PTVLN-STD-----VAFHN-GT---LLEALKTYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDLTTEDLEAYAQMVNH 156 (235)
T ss_dssp EEETT-BSS-----GGGTT-HH---HHHHHHHHGGGCCGGGEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHH
T ss_pred ccccC-CCC-----cchhh-hH---HHHHHHHcCCCCcccceeeeeEEEECCCCChhhcccCCcCCCHHHHHHHHHHHHH
Confidence 66421 111 01111 01 1122333322 1 001233443321111 113444444433 222
Q ss_pred hcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012478 251 DAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 251 eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
=.|-..||+++- .+.+.++++.+..+.+|+. +.+|=++| =..+++.+ |...|+.|+.+..
T Consensus 157 ~~g~~~vY~e~sG~~g~~~~v~~ir~~~~~~pv~---vGfGI~~~-e~a~~~~~-gAD~VVVGSai~~ 219 (235)
T 3w01_A 157 MYRLPVMYIEYSGIYGDVSKVQAVSEHLTETQLF---YGGGISSE-QQATEMAA-IADTIIVGDIIYK 219 (235)
T ss_dssp TTCCSEEEEECTTSCCCHHHHHHHHTTCSSSEEE---EESCCCSH-HHHHHHHT-TSSEEEECTHHHH
T ss_pred HcCCCEEEEecCCCcCCHHHHHHHHHhcCCCCEE---EECCcCCH-HHHHHHHc-CCCEEEECCceec
Confidence 237788888762 2567788887766335543 33322322 12345666 8999999997776
No 417
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=87.12 E-value=7.7 Score=37.14 Aligned_cols=115 Identities=9% Similarity=0.083 Sum_probs=60.6
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCccc-----------CHHHHHHHHHHHHHHH
Q 012478 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVV-----------SREEAVMRIKAAVDAR 218 (462)
Q Consensus 150 ~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lv-----------p~ee~~~kI~AA~~Ar 218 (462)
-+|.|. .|+-+..+..+.++.++++|+++|+| |-.+ .-..++|..+. ..+...+-|+++++..
T Consensus 19 ~i~~i~---~gdp~~~~~~~~~~~l~~~GaD~iei-g~P~--sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~ 92 (268)
T 1qop_A 19 FVPFVT---LGDPGIEQSLKIIDTLIDAGADALEL-GVPF--SDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKH 92 (268)
T ss_dssp EEEEEE---TTSSCHHHHHHHHHHHHHTTCSSEEE-ECCC--SCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC
T ss_pred EEEEee---CCCCCHHHHHHHHHHHHHCCCCEEEE-CCCC--CCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC
Confidence 366664 56656678888899999999999999 3221 00112221111 1122223344443321
Q ss_pred HhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCCC--HHHHHHHHHhC
Q 012478 219 KESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALAS--KEEMKAFCEIS 275 (462)
Q Consensus 219 ~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~s--~eei~~i~~~v 275 (462)
.+..++++...+-....+.+.- ++.+.++|||.+.++.++. .+++.+.++..
T Consensus 93 --~~~Pv~lm~y~n~v~~~g~~~~---~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~ 146 (268)
T 1qop_A 93 --PTIPIGLLMYANLVFNNGIDAF---YARCEQVGVDSVLVADVPVEESAPFRQAALRH 146 (268)
T ss_dssp --SSSCEEEEECHHHHHTTCHHHH---HHHHHHHTCCEEEETTCCGGGCHHHHHHHHHT
T ss_pred --CCCCEEEEEcccHHHHhhHHHH---HHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHc
Confidence 1234555533332223344443 4556789999888877653 23444444443
No 418
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=86.85 E-value=2.9 Score=41.05 Aligned_cols=151 Identities=14% Similarity=0.109 Sum_probs=86.5
Q ss_pred cccCCCccccccCchHH---HHHHHHh--CCCceEecccCCh------HHHHHHHHhCCcEEEeccHHHHhhhccCCCCC
Q 012478 63 VYRKNSTGVEACLSPAK---SLRQILE--LPGVHQGPACFDA------LSAKLVEKSGFSFCFTSGFSISAARLALPDTG 131 (462)
Q Consensus 63 ~y~rgs~~~~~a~~~a~---~LR~ll~--~~~~iv~p~ayDa------lSArl~e~aGfdaI~vSG~avSas~lG~PD~g 131 (462)
.+.-||...-+..+..+ -++...+ .++.-++.|+-.. --|+.++++|+|++++.. |-..
T Consensus 50 l~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~----------P~y~ 119 (301)
T 1xky_A 50 IVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVA----------PYYN 119 (301)
T ss_dssp EEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEEC----------CCSS
T ss_pred EEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcC----------CCCC
Confidence 34456666554333322 2333222 3444444555432 235667788999998763 1112
Q ss_pred CCCHHHHHHHHHHHHhhcCCcEEE-eCCC--CCC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHH
Q 012478 132 FISYGEMVDQGQLITQAVSIPVIG-DGDN--GYG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEA 207 (462)
Q Consensus 132 ~vsl~Eml~~~~~I~ra~~iPVIa-D~Dt--GyG-~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~ 207 (462)
..+-+++.+|.+.|++++++||+. +.|. |+. .+..+.+.++ .-.+.|||-... .
T Consensus 120 ~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~---~pnIvgiKdssg-------d------------ 177 (301)
T 1xky_A 120 KPSQEGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRLSE---IENIVAIKDAGG-------D------------ 177 (301)
T ss_dssp CCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHT---STTEEEEEECSS-------C------------
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHc---CCCEEEEEcCCC-------C------------
Confidence 247799999999999999999876 7774 543 3444444431 256889886432 1
Q ss_pred HHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEe
Q 012478 208 VMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFI 259 (462)
Q Consensus 208 ~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifi 259 (462)
..++...+... +++|.|..=.|.. ...+..+|++.++-
T Consensus 178 ~~~~~~~~~~~---~~~f~v~~G~d~~-----------~l~~l~~G~~G~is 215 (301)
T 1xky_A 178 VLTMTEIIEKT---ADDFAVYSGDDGL-----------TLPAMAVGAKGIVS 215 (301)
T ss_dssp HHHHHHHHHHS---CTTCEEEESSGGG-----------HHHHHHTTCCEEEE
T ss_pred HHHHHHHHHhc---CCCeEEEECcHHH-----------HHHHHHcCCCEEEc
Confidence 22333333332 3578777655543 22334689998764
No 419
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=86.84 E-value=3 Score=43.35 Aligned_cols=133 Identities=14% Similarity=0.119 Sum_probs=80.8
Q ss_pred HHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHh---hcCCcEEEeCCCCCC-CHHHHHHHHHHHHHh
Q 012478 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQ---AVSIPVIGDGDNGYG-NAMNVKRTVKGYIKA 177 (462)
Q Consensus 102 Arl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~r---a~~iPVIaD~DtGyG-~~~nv~rtVk~l~~A 177 (462)
...+-++|.+.|-+.- +.|-.. -. -.-..+.+|.++.+..+++ ..++.|.++++++|. ++..+.+.++.+.++
T Consensus 116 i~~A~~aG~~~V~i~~-s~Sd~~-~~-~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~eda~r~d~~~~~~v~~~~~~~ 192 (423)
T 3ivs_A 116 ARVAVETGVDGVDVVI-GTSQYL-RK-YSHGKDMTYIIDSATEVINFVKSKGIEVRFSSEDSFRSDLVDLLSLYKAVDKI 192 (423)
T ss_dssp HHHHHHTTCSEEEEEE-EC---------------CHHHHHHHHHHHHHHTTTCEEEEEEESGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEe-eccHHH-HH-HHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEccCcCCCHHHHHHHHHHHHHh
Confidence 4555567888766541 011001 00 1122466676666555443 346889999999986 577889999999999
Q ss_pred CccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEE
Q 012478 178 GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVL 257 (462)
Q Consensus 178 GaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~I 257 (462)
|+.-|.|-|.+ | +..+.++.+.|++.++.- +..+-+-...|. .-|+.-+.+..+|||+.|
T Consensus 193 Ga~~i~l~DTv-----G------~~~P~~v~~lv~~l~~~~---~~~i~~H~Hnd~------GlAvAN~laAv~aGa~~v 252 (423)
T 3ivs_A 193 GVNRVGIADTV-----G------CATPRQVYDLIRTLRGVV---SCDIECHFHNDT------GMAIANAYCALEAGATHI 252 (423)
T ss_dssp CCSEEEEEETT-----S------CCCHHHHHHHHHHHHHHC---SSEEEEEEBCTT------SCHHHHHHHHHHTTCCEE
T ss_pred CCCccccCCcc-----C------cCCHHHHHHHHHHHHhhc---CCeEEEEECCCC------chHHHHHHHHHHhCCCEE
Confidence 99999999986 3 334566777777665431 233333344332 234667778889999954
No 420
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=86.84 E-value=1.4 Score=43.89 Aligned_cols=130 Identities=13% Similarity=0.158 Sum_probs=83.8
Q ss_pred HHHHHHhCccEEEeCC-CCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHh
Q 012478 171 VKGYIKAGFAGIILED-QVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAF 249 (462)
Q Consensus 171 Vk~l~~AGaaGI~IED-q~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy 249 (462)
.+.++++|+.+|-+-| +..--..||.+ ..+++.+|++..+++++.+. +..|++=-|.-.. +.+.+.+-++.|
T Consensus 35 A~l~e~aGf~ai~vs~~s~a~~~~G~pD-~~~vt~~em~~~~~~I~r~~-----~~PviaD~d~Gyg-~~~~v~~~v~~l 107 (298)
T 3eoo_A 35 AKMAEAVGFKAVYLSGGGVAANSLGIPD-LGISTMDDVLVDANRITNAT-----NLPLLVDIDTGWG-GAFNIARTIRSF 107 (298)
T ss_dssp HHHHHHHTCSCEEECHHHHHHHTTCCCS-SSCCCHHHHHHHHHHHHHHC-----CSCEEEECTTCSS-SHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECcHHHHHHhcCCCC-CCCCCHHHHHHHHHHHHhhc-----CCeEEEECCCCCC-CHHHHHHHHHHH
Confidence 3456789999999988 32212356644 24789999999999988764 3446665554222 567788889999
Q ss_pred HhcCCcEEEecCC--------------CCH-HHHHHHH---HhCCCCceeeeeeecCCCCCCCC----------HHHHHh
Q 012478 250 ADAGADVLFIDAL--------------ASK-EEMKAFC---EISPLVPKMANMLEGGGKTPILN----------PLELEE 301 (462)
Q Consensus 250 ~eAGAD~Ifie~~--------------~s~-eei~~i~---~~v~~vP~~~N~l~~~g~tP~ls----------~~eL~~ 301 (462)
.++||.+|-||.- .+. |.+.+|. +.-.+.+.++|.- |..+. ...+.+
T Consensus 108 ~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~AR-----TDa~~~~gldeai~Ra~ay~~ 182 (298)
T 3eoo_A 108 IKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMAR-----TDAAAAEGIDAAIERAIAYVE 182 (298)
T ss_dssp HHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEE-----ECTHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEe-----ehhhhhcCHHHHHHHHHhhHh
Confidence 9999999999962 133 3344553 2222345666643 22221 233678
Q ss_pred cCCCEEeccch
Q 012478 302 LGFKLVAYPLS 312 (462)
Q Consensus 302 lGv~~V~yp~~ 312 (462)
+|...|..+..
T Consensus 183 AGAD~if~~~~ 193 (298)
T 3eoo_A 183 AGADMIFPEAM 193 (298)
T ss_dssp TTCSEEEECCC
T ss_pred cCCCEEEeCCC
Confidence 89988877653
No 421
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=86.83 E-value=18 Score=36.97 Aligned_cols=160 Identities=14% Similarity=0.002 Sum_probs=87.8
Q ss_pred HHHHHHHHhCCcEEEec---cHHHHhhh----ccCCCCCCCCHHH----HHHHHHHHHhhcC-CcEEEeCCCC--C----
Q 012478 100 LSAKLVEKSGFSFCFTS---GFSISAAR----LALPDTGFISYGE----MVDQGQLITQAVS-IPVIGDGDNG--Y---- 161 (462)
Q Consensus 100 lSArl~e~aGfdaI~vS---G~avSas~----lG~PD~g~vsl~E----ml~~~~~I~ra~~-iPVIaD~DtG--y---- 161 (462)
-.|+.+.++|||+|=+- |+-+.-.. .-.-|.--=+++. +++.++.|+++++ .||.+.+--+ |
T Consensus 175 ~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~ 254 (402)
T 2hsa_B 175 RSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAM 254 (402)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCC
T ss_pred HHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccCCCC
Confidence 56788889999999876 33332110 0112321123432 4556666666664 4898885432 1
Q ss_pred -CCH-HHHHHHHHHHHHhC------ccEEEeCCCCCCCCCCCCCCCc--ccCHH-HHHHHHHHHHHHHHhhCCCeEEEEe
Q 012478 162 -GNA-MNVKRTVKGYIKAG------FAGIILEDQVSPKGCGHTRGRK--VVSRE-EAVMRIKAAVDARKESGSDIVIVAR 230 (462)
Q Consensus 162 -G~~-~nv~rtVk~l~~AG------aaGI~IEDq~~PKrCGH~~gk~--Lvp~e-e~~~kI~AA~~Ar~~~g~d~vIiAR 230 (462)
++. ....+.++.++++| ++.|++-..... .+. ..+ .++.. ....-++.++++ .+..++.+++
T Consensus 255 ~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~vk~~---~~iPvi~~G~ 327 (402)
T 2hsa_B 255 DSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYV---AYG-QTEAGRLGSEEEEARLMRTLRNA---YQGTFICSGG 327 (402)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCC---TTT-TSSSTTTTHHHHHHHHHHHHHHH---CSSCEEEESS
T ss_pred CCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccc---ccc-CCccccccCCcchHHHHHHHHHH---CCCCEEEeCC
Confidence 233 56788899999999 999999554210 000 011 01111 111222222222 2345666655
Q ss_pred cchhhcccHHHHHHHHHHhHhcC-CcEEEec--CCCCHHHHHHHHHhCC
Q 012478 231 TDSRQALSLEESLRRSRAFADAG-ADVLFID--ALASKEEMKAFCEISP 276 (462)
Q Consensus 231 TDA~~~~gldeAI~RakAy~eAG-AD~Ifie--~~~s~eei~~i~~~v~ 276 (462)
.+ .+.+..+.+.| ||+|.+- .+.+++..+++.+..+
T Consensus 328 i~----------~~~a~~~l~~g~aD~V~igR~~l~dP~l~~k~~~g~~ 366 (402)
T 2hsa_B 328 YT----------RELGIEAVAQGDADLVSYGRLFISNPDLVMRIKLNAP 366 (402)
T ss_dssp CC----------HHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCC
T ss_pred CC----------HHHHHHHHHCCCCceeeecHHHHhCchHHHHHHhCCC
Confidence 42 23456666677 9999983 3456678888876543
No 422
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=86.82 E-value=13 Score=41.23 Aligned_cols=148 Identities=18% Similarity=0.200 Sum_probs=84.0
Q ss_pred HHHHHHh--CCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhc-CCcE--EEeCCC--CCCC-HHH-HHHHHH
Q 012478 102 AKLVEKS--GFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV-SIPV--IGDGDN--GYGN-AMN-VKRTVK 172 (462)
Q Consensus 102 Arl~e~a--GfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~-~iPV--IaD~Dt--GyG~-~~n-v~rtVk 172 (462)
|+.+.++ |++.|=++|.+.--+.++++. .-+++ .+. .+.+.. +.++ .+-+.+ ||-. +.+ +.+.++
T Consensus 131 a~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~--e~p~e-~l~---~l~~~~~~~~l~~l~R~~n~vgy~~~p~~~~~~~i~ 204 (718)
T 3bg3_A 131 APYVAHNFSKLFSMENWGGATFDVAMRFLY--ECPWR-RLQ---ELRELIPNIPFQMLLRGANAVGYTNYPDNVVFKFCE 204 (718)
T ss_dssp HHHHHHHCTTCSEEEEEETTHHHHHHHTSC--CCHHH-HHH---HHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHHHH
T ss_pred HHHHHHhcCCCcEEEecCCcchhhccccCC--CCHHH-HHH---HHHHHcccchHHHHhcccccccccccCCcchHHHHH
Confidence 5566677 576688774332112233332 22333 333 333322 2343 345544 4443 455 567799
Q ss_pred HHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEE--Eec----chh-hcccHHHHHHH
Q 012478 173 GYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV--ART----DSR-QALSLEESLRR 245 (462)
Q Consensus 173 ~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIi--ART----DA~-~~~gldeAI~R 245 (462)
...++|+..|+|=|.. .| +++++..+++.++.|. .+.. .-+ |.. .....+..++-
T Consensus 205 ~a~~~Gvd~irIf~s~-----n~------------l~~l~~~i~~ak~~G~-~v~~~i~~~~d~~dp~r~~~~~e~~~~~ 266 (718)
T 3bg3_A 205 VAKENGMDVFRVFDSL-----NY------------LPNMLLGMEAAGSAGG-VVEAAISYTGDVADPSRTKYSLQYYMGL 266 (718)
T ss_dssp HHHHHTCCEEEEECSS-----CC------------HHHHHHHHHHHHTTTS-EEEEEEECCSCTTCTTCCTTCHHHHHHH
T ss_pred HHHhcCcCEEEEEecH-----HH------------HHHHHHHHHHHHHcCC-eEEEEEEeeccccCCCCCCCCHHHHHHH
Confidence 9999999999997752 22 2345555555444442 2222 234 322 23478899999
Q ss_pred HHHhHhcCCcEEEec---CCCCHHHHHHHHH
Q 012478 246 SRAFADAGADVLFID---ALASKEEMKAFCE 273 (462)
Q Consensus 246 akAy~eAGAD~Ifie---~~~s~eei~~i~~ 273 (462)
++++.++|||.|.+. |.-.++++.++++
T Consensus 267 a~~l~~~Ga~~I~l~DT~G~~~P~~v~~lV~ 297 (718)
T 3bg3_A 267 AEELVRAGTHILCIKDMAGLLKPTACTMLVS 297 (718)
T ss_dssp HHHHHHHTCSEEEEECTTSCCCHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcCcCCCcCHHHHHHHHH
Confidence 999999999999885 3455666555543
No 423
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=86.81 E-value=2.1 Score=41.07 Aligned_cols=125 Identities=16% Similarity=0.135 Sum_probs=75.0
Q ss_pred HHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecch----hhcccHHHHHHHHHHhH
Q 012478 175 IKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDS----RQALSLEESLRRSRAFA 250 (462)
Q Consensus 175 ~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA----~~~~gldeAI~RakAy~ 250 (462)
++.||+=|-|=+.. ..+| +.|.-..++.++. + .+..+.+..++-|--. +....++...+..+.+.
T Consensus 18 ~~~GAdRIELc~~L------~~GG--lTPS~g~i~~~~~--~-~~~~~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~ 86 (224)
T 2bdq_A 18 DKAIISRVELCDNL------AVGG--TTPSYGVIKEANQ--Y-LHEKGISVAVMIRPRGGNFVYNDLELRIMEEDILRAV 86 (224)
T ss_dssp CTTTCCEEEEEBCG------GGTC--BCCCHHHHHHHHH--H-HHHTTCEEEEECCSSSSCSCCCHHHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEcCCc------ccCC--cCCCHHHHHHHHH--h-hhhcCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHH
Confidence 45777777664432 1122 5555444433321 1 1222356777777422 12345788889999999
Q ss_pred hcCCcEEEecCC-----CCHHHHHHHHHhCCCCceeeeeeecCC--CCCCCCHHHHHhcCCCEEecc
Q 012478 251 DAGADVLFIDAL-----ASKEEMKAFCEISPLVPKMANMLEGGG--KTPILNPLELEELGFKLVAYP 310 (462)
Q Consensus 251 eAGAD~Ifie~~-----~s~eei~~i~~~v~~vP~~~N~l~~~g--~tP~ls~~eL~~lGv~~V~yp 310 (462)
++|||.+++-++ -+.+.++++.+...+.|..+.+--.-- .-|.-..++|.++||++|+-.
T Consensus 87 ~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~rILTS 153 (224)
T 2bdq_A 87 ELESDALVLGILTSNNHIDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRILLH 153 (224)
T ss_dssp HTTCSEEEECCBCTTSSBCHHHHHHHHHHHTTCCEEECGGGGGSCTTTHHHHHHHHHHTTCCEEEEC
T ss_pred HcCCCEEEEeeECCCCCcCHHHHHHHHHHhCCCeEEEECchhccCCcCHHHHHHHHHHcCCCEEECC
Confidence 999999998776 367888888876554554443211000 112224788999999999964
No 424
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=86.77 E-value=3.4 Score=41.25 Aligned_cols=136 Identities=17% Similarity=0.134 Sum_probs=87.5
Q ss_pred HHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHh---hcCCcEEEeCCC---CCC-CHHHHHHHHHH
Q 012478 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQ---AVSIPVIGDGDN---GYG-NAMNVKRTVKG 173 (462)
Q Consensus 101 SArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~r---a~~iPVIaD~Dt---GyG-~~~nv~rtVk~ 173 (462)
....+-++|.+.+-+.... + -.+.. ..-..+.+|.++.+..+.+ ..++.|.+++++ ++- ++..+.+.++.
T Consensus 101 ~i~~a~~~g~~~v~i~~~~-s-~~~~~-~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~ 177 (337)
T 3ble_A 101 TVDWIKDSGAKVLNLLTKG-S-LHHLE-KQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEH 177 (337)
T ss_dssp HHHHHHHHTCCEEEEEEEC-S-HHHHH-HHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHH
T ss_pred hHHHHHHCCCCEEEEEEec-C-HHHHH-HHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHH
Confidence 4556667899987665211 1 00111 1112478888877776654 346889999877 422 46778899999
Q ss_pred HHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcC
Q 012478 174 YIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAG 253 (462)
Q Consensus 174 l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAG 253 (462)
++++|+..|.|-|.. | +..++++.+.|+++++.-. +..+-+-...|. .-|+.-+.+..+||
T Consensus 178 ~~~~Ga~~i~l~DT~-----G------~~~P~~v~~lv~~l~~~~p--~~~i~~H~Hnd~------GlA~AN~laAv~aG 238 (337)
T 3ble_A 178 LSKEHIERIFLPDTL-----G------VLSPEETFQGVDSLIQKYP--DIHFEFHGHNDY------DLSVANSLQAIRAG 238 (337)
T ss_dssp HHTSCCSEEEEECTT-----C------CCCHHHHHHHHHHHHHHCT--TSCEEEECBCTT------SCHHHHHHHHHHTT
T ss_pred HHHcCCCEEEEecCC-----C------CcCHHHHHHHHHHHHHhcC--CCeEEEEecCCc------chHHHHHHHHHHhC
Confidence 999999999999986 3 3345677777777766531 123444444333 23466777888999
Q ss_pred CcEEE
Q 012478 254 ADVLF 258 (462)
Q Consensus 254 AD~If 258 (462)
|+.|=
T Consensus 239 a~~vd 243 (337)
T 3ble_A 239 VKGLH 243 (337)
T ss_dssp CSEEE
T ss_pred CCEEE
Confidence 99764
No 425
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=86.76 E-value=4.3 Score=42.11 Aligned_cols=98 Identities=20% Similarity=0.290 Sum_probs=72.1
Q ss_pred CHHHHHHHHHHHHH-hCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHH
Q 012478 163 NAMNVKRTVKGYIK-AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEE 241 (462)
Q Consensus 163 ~~~nv~rtVk~l~~-AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~glde 241 (462)
+++.+.+.++++.+ .|...+||-- |. .+.++-+++|+|++++. +++.| +.|+-....+++
T Consensus 182 ~~e~~~~~a~~~~~~~Gf~~~KlKv-------G~------~~~~~Di~~v~avRea~----pd~~L--~vDaN~~w~~~~ 242 (450)
T 3mzn_A 182 TPEAVANLARAAYDRYGFKDFKLKG-------GV------LRGEEEADCIRALHEAF----PEARL--ALDPNGAWKLDE 242 (450)
T ss_dssp SHHHHHHHHHHHHHHHCCSEEEEEC-------SS------SCHHHHHHHHHHHHHHC----TTSEE--EEECTTCBCHHH
T ss_pred CHHHHHHHHHHHHHhCCCCEEEECC-------CC------CCHHHHHHHHHHHHHhC----CCCeE--EEECCCCCCHHH
Confidence 57788888888776 6999999932 22 13455678999988873 45543 468888888999
Q ss_pred HHHHHHHhHhcCCcEEEecCCC---C----HHHHHHHHHhCCCCceeee
Q 012478 242 SLRRSRAFADAGADVLFIDALA---S----KEEMKAFCEISPLVPKMAN 283 (462)
Q Consensus 242 AI~RakAy~eAGAD~Ifie~~~---s----~eei~~i~~~v~~vP~~~N 283 (462)
|++.++++++. ..|+|-+- + .+.++++.+..+ +|+..+
T Consensus 243 A~~~~~~L~~~---i~~iEeP~~~~d~~~~~~~~~~l~~~~~-iPIa~d 287 (450)
T 3mzn_A 243 AVRVLEPIKHL---LSYAEDPCGQEGGFSGRETMAEFKKRTG-LPTATN 287 (450)
T ss_dssp HHHHHGGGGGG---CSEEESSBCCBTTBCHHHHHHHHHHHHC-CCEEES
T ss_pred HHHHHHHhhhc---cceeeCCCCcccccchHHHHHHHHHhcC-CCEEeC
Confidence 99999999875 45887652 2 467889988876 677654
No 426
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=86.53 E-value=7.5 Score=38.55 Aligned_cols=101 Identities=15% Similarity=0.205 Sum_probs=73.9
Q ss_pred CCCCH-HHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhccc
Q 012478 160 GYGNA-MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS 238 (462)
Q Consensus 160 GyG~~-~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~g 238 (462)
++++. ..+.+.++.+.+.|...+|+--+ . .+.++-+++|++++++. |+++.| |.|+-...+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~g~~~~K~Kvg-------~------~~~~~d~~~v~avr~~~---g~~~~l--~vDaN~~~~ 200 (370)
T 2chr_A 139 ASGDTKRDLDSAVEMIERRRHNRFKVKLG-------F------RSPQDDLIHMEALSNSL---GSKAYL--RVDVNQAWD 200 (370)
T ss_dssp CSSCHHHHHHHHHHHHHTTSCCEEEEECS-------S------SCHHHHHHHHHHHHHHT---TTTSEE--EEECTTCCC
T ss_pred ccCchhhhHHHHHHHHhhcccceeecccc-------c------CChHHHHHHHHHHHHhc---CCCcEE--EecCCCCCC
Confidence 44554 56777788888899999998432 2 23566678888887764 566544 358888888
Q ss_pred HHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCcee
Q 012478 239 LEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKM 281 (462)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~ 281 (462)
.++|++.++++.+.+ ..|+|-+ .+.+.++++.+..+ +|+.
T Consensus 201 ~~~A~~~~~~l~~~~--~~~iEeP~~~~d~~~~~~l~~~~~-ipIa 243 (370)
T 2chr_A 201 EQVASVYIPELEALG--VELIEQPVGRENTQALRRLSDNNR-VAIM 243 (370)
T ss_dssp THHHHHHHHHHHTTT--CCEEECCSCSSCHHHHHHHHHHCS-SEEE
T ss_pred HHHHHHHHHHHHhcC--CceecCCCChhhhhhhhHHhhhcc-CCcc
Confidence 999999999999875 4577764 46788999998876 5654
No 427
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=86.53 E-value=2.3 Score=42.29 Aligned_cols=115 Identities=15% Similarity=0.087 Sum_probs=75.2
Q ss_pred CceEecccCChHHHHHHHHhCCcEEEeccHH------------------HHhhhccC-CCCCCCCHH-H---HHHHHHHH
Q 012478 89 GVHQGPACFDALSAKLVEKSGFSFCFTSGFS------------------ISAARLAL-PDTGFISYG-E---MVDQGQLI 145 (462)
Q Consensus 89 ~~iv~p~ayDalSArl~e~aGfdaI~vSG~a------------------vSas~lG~-PD~g~vsl~-E---ml~~~~~I 145 (462)
+..++.+|.|.--|.-..+.|++.|-+.|.+ +- ...|| .+-.++++. + =.+.++.|
T Consensus 115 ~vpfv~~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h~r~~~~~i~-~l~g~~t~~el~~~a~~~~ad~elI~~I 193 (291)
T 3o07_A 115 KVPFVCGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITEEIK-ACQQLKSEDDIAKVAEEMRVPVSLLKDV 193 (291)
T ss_dssp SSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHH-HHHTCCCHHHHHHHHHHHTSCHHHHHHH
T ss_pred CCcEEeeCCCHHHHHHHHHCCCCEEEecCcCCCccHHHHHHHHHHHHHHHH-HHHcCCCHHHhhhcccccCCCHHHHHHH
Confidence 3467789999999999999999999998541 00 12255 332222221 0 02445667
Q ss_pred HhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHH
Q 012478 146 TQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDAR 218 (462)
Q Consensus 146 ~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar 218 (462)
.+..++|||+.+..|..++.++.+. .++|++||.+=-..+ + --++..++.++..+....
T Consensus 194 ke~~~IPVV~IAnGGI~TpedA~~~----le~GaDGVmVGrAI~----~------s~DP~~~Akafv~Av~~~ 252 (291)
T 3o07_A 194 LEKGKLPVVNFAAGGVATPADAALL----MQLGCDGVFVGSGIF----K------SSNPVRLATAVVEATTHF 252 (291)
T ss_dssp HHHTSCSSCEEBCSSCCSHHHHHHH----HHTTCSCEEECGGGG----G------SSCHHHHHHHHHHHHHTT
T ss_pred HHccCCCEEEecCCCCCCHHHHHHH----HHhCCCEEEEchHHh----C------CCCHHHHHHHHHHHHHhc
Confidence 7778899999999998888777643 378999999944431 0 013566777776665543
No 428
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=86.42 E-value=6.8 Score=39.04 Aligned_cols=124 Identities=15% Similarity=0.106 Sum_probs=78.8
Q ss_pred HHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEE-eCCCCCCCHHHHHHHHHHHHHhCcc-E
Q 012478 104 LVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIG-DGDNGYGNAMNVKRTVKGYIKAGFA-G 181 (462)
Q Consensus 104 l~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIa-D~DtGyG~~~nv~rtVk~l~~AGaa-G 181 (462)
-..+.|.|.|-+++-+ +-|+...++.+|+++.++.|.+.+++||++ | -||++.=.+.++...++|+. =
T Consensus 82 ~~v~~GAdiIDIg~~S------trP~~~~vs~eee~~vV~~v~~~~~vplsI~D----T~~~~~~~~V~eaal~aga~~k 151 (310)
T 2h9a_B 82 KCVEYGADIVALRLVS------AHPDGQNRSGAELAEVCKAVADAIDVPLMIIG----CGVEEKDAEIFPVIGEALSGRN 151 (310)
T ss_dssp HHHHTTCSEEEEECGG------GCTTTTCCCHHHHHHHHHHHHHHCSSCEEEEC----CSCHHHHHHHHHHHHHHTTTSC
T ss_pred HHHHcCCcEEEEeCcc------CCCCCCCCCHHHHHHHHHHHHHhCCceEEEEC----CCCCCCCHHHHHHHHHhCCCCC
Confidence 3347899999999742 468878899999999999999989999999 9 46776555566777788875 1
Q ss_pred EEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCC---cEEE
Q 012478 182 IILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGA---DVLF 258 (462)
Q Consensus 182 I~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGA---D~If 258 (462)
..|-|-. | + ..++++. .+ .+.|..+++..--| ++.+-++.....++|. +.|+
T Consensus 152 ~iINdvs-----~---~----~~~~~~~---~a----a~~g~~vv~m~~~d------v~~l~~~~~~a~~~Gi~~e~Iil 206 (310)
T 2h9a_B 152 CLLSSAT-----K---D----NYKPIVA---TC----MVHGHSVVASAPLD------INLSKQLNIMIMEMNLAPNRIIM 206 (310)
T ss_dssp CEEEEEC-----T---T----THHHHHH---HH----HHHTCEEEEECSSC------HHHHHHHHHHHHTTTCCGGGEEE
T ss_pred CEEEECC-----C---C----ccHHHHH---HH----HHhCCCEEEEChhH------HHHHHHHHHHHHHCCCChhhEEE
Confidence 1233432 1 1 1223322 11 11244455544212 4566667777779998 3444
Q ss_pred ecCC
Q 012478 259 IDAL 262 (462)
Q Consensus 259 ie~~ 262 (462)
=+++
T Consensus 207 DPg~ 210 (310)
T 2h9a_B 207 DPLI 210 (310)
T ss_dssp ECCC
T ss_pred eCCC
Confidence 3443
No 429
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=86.34 E-value=20 Score=35.63 Aligned_cols=147 Identities=10% Similarity=0.001 Sum_probs=89.2
Q ss_pred hHHHHHHHHhC--CCceEec---ccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCC
Q 012478 77 PAKSLRQILEL--PGVHQGP---ACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSI 151 (462)
Q Consensus 77 ~a~~LR~ll~~--~~~iv~p---~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~i 151 (462)
..+.++++.+. +-++++. +--..-..+.+.++|++.+-+.- .+ .| .+++.+.++. ++..++
T Consensus 69 ~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~~aGvd~v~I~~-~~-------s~-----~~~~~~~i~~-ak~~G~ 134 (345)
T 1nvm_A 69 DLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAYQAGARVVRVAT-HC-------TE-----ADVSKQHIEY-ARNLGM 134 (345)
T ss_dssp HHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHHHHTCCEEEEEE-ET-------TC-----GGGGHHHHHH-HHHHTC
T ss_pred HHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHHHhCCcCEEEEEE-ec-------cH-----HHHHHHHHHH-HHHCCC
Confidence 34456665543 2245444 43234445566678999887641 11 11 1333333333 344567
Q ss_pred cEEEeCCCCCC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEE-
Q 012478 152 PVIGDGDNGYG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA- 229 (462)
Q Consensus 152 PVIaD~DtGyG-~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiA- 229 (462)
.+++.+.+.+. ++..+.+.++.+.++|+.-|.|-|.+ |. ..++++.+.|+++++.- +++..|--
T Consensus 135 ~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~-----G~------~~P~~v~~lv~~l~~~~---~~~~pi~~H 200 (345)
T 1nvm_A 135 DTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMADSG-----GA------MSMNDIRDRMRAFKAVL---KPETQVGMH 200 (345)
T ss_dssp EEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEECTT-----CC------CCHHHHHHHHHHHHHHS---CTTSEEEEE
T ss_pred EEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEECCCc-----Cc------cCHHHHHHHHHHHHHhc---CCCceEEEE
Confidence 78888766654 56789999999999999999999986 32 23567777777776653 12333333
Q ss_pred -ecchhhcccHHHHHHHHHHhHhcCCcEE
Q 012478 230 -RTDSRQALSLEESLRRSRAFADAGADVL 257 (462)
Q Consensus 230 -RTDA~~~~gldeAI~RakAy~eAGAD~I 257 (462)
..|. .-++.-+.+..+||||.|
T Consensus 201 ~Hn~~------G~avAn~laA~~aGa~~v 223 (345)
T 1nvm_A 201 AHHNL------SLGVANSIVAVEEGCDRV 223 (345)
T ss_dssp CBCTT------SCHHHHHHHHHHTTCCEE
T ss_pred ECCCc------cHHHHHHHHHHHcCCCEE
Confidence 3332 234667778889999975
No 430
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=86.25 E-value=8.2 Score=37.59 Aligned_cols=161 Identities=15% Similarity=0.109 Sum_probs=91.5
Q ss_pred cccCCCccccccCchH---HHHHHHHhCCCceEecccC--ChH----HHHHHHHhCCcEEEeccHHHHhhhccCCCCCC-
Q 012478 63 VYRKNSTGVEACLSPA---KSLRQILELPGVHQGPACF--DAL----SAKLVEKSGFSFCFTSGFSISAARLALPDTGF- 132 (462)
Q Consensus 63 ~y~rgs~~~~~a~~~a---~~LR~ll~~~~~iv~p~ay--Dal----SArl~e~aGfdaI~vSG~avSas~lG~PD~g~- 132 (462)
.+.-||...-+..+.. +-++...+.-.. ++.|+- +-- -|+.++++|+|++++.. |-...
T Consensus 37 l~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g-viaGvg~~~t~~ai~la~~A~~~Gadavlv~~----------P~y~~~ 105 (293)
T 1w3i_A 37 LFVNGTTGLGPSLSPEEKLENLKAVYDVTNK-IIFQVGGLNLDDAIRLAKLSKDFDIVGIASYA----------PYYYPR 105 (293)
T ss_dssp EEESSTTTTGGGSCHHHHHHHHHHHHTTCSC-EEEECCCSCHHHHHHHHHHGGGSCCSEEEEEC----------CCSCSS
T ss_pred EEECccccChhhCCHHHHHHHHHHHHHHcCC-EEEecCCCCHHHHHHHHHHHHhcCCCEEEEcC----------CCCCCC
Confidence 4456666655433332 333444433221 444443 322 24555667999988763 11122
Q ss_pred CCHHHHHHHHHHHHhhcCCcEEE-eCC--CCCC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHH
Q 012478 133 ISYGEMVDQGQLITQAVSIPVIG-DGD--NGYG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAV 208 (462)
Q Consensus 133 vsl~Eml~~~~~I~ra~~iPVIa-D~D--tGyG-~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~ 208 (462)
.+-+++.+|-+.|++++++||+. +.| +|+. .+..+.+ .-.+.|||-... . .
T Consensus 106 ~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~------~pnIvgiKds~g-------d------------~ 160 (293)
T 1w3i_A 106 MSEKHLVKYFKTLCEVSPHPVYLYNYPTATGKDIDAKVAKE------IGCFTGVKDTIE-------N------------I 160 (293)
T ss_dssp CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHH------HCCEEEEEECCS-------C------------H
T ss_pred CCHHHHHHHHHHHHhhCCCCEEEEECchhhCcCCCHHHHHh------cCCEEEEEeCCC-------C------------H
Confidence 47899999999999999999876 776 4543 3444444 357889985432 1 2
Q ss_pred HHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCC-CCHHHHHHHHHh
Q 012478 209 MRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEI 274 (462)
Q Consensus 209 ~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~ 274 (462)
.++...+. . +++|.|..=.|... ..+..+|++.++--.- --++.+.++.+.
T Consensus 161 ~~~~~~~~-~---~~~f~v~~G~d~~~-----------~~~l~~G~~G~is~~an~~P~~~~~l~~a 212 (293)
T 1w3i_A 161 IHTLDYKR-L---NPNMLVYSGSDMLI-----------ATVASTGLDGNVAAGSNYLPEVTVTIKKL 212 (293)
T ss_dssp HHHHHHHH-H---CTTSEEEECCSTTH-----------HHHHHTTCCEEECGGGGTCHHHHHHHHHH
T ss_pred HHHHHHHh-c---CCCEEEEEccHHHH-----------HHHHHcCCCEEEeCHHHhCHHHHHHHHHH
Confidence 23333333 1 46887776556532 2344589998764221 235666666664
No 431
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=86.20 E-value=9.8 Score=39.24 Aligned_cols=127 Identities=13% Similarity=0.114 Sum_probs=71.1
Q ss_pred HHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhc-CCcEEEeCCCC-CCCHHHHHHHHHHHHHh
Q 012478 100 LSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV-SIPVIGDGDNG-YGNAMNVKRTVKGYIKA 177 (462)
Q Consensus 100 lSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~-~iPVIaD~DtG-yG~~~nv~rtVk~l~~A 177 (462)
-.|+.+.++|++++.+.+. .|.+ ...++.++.+++.. ++|++ .| .++. +.++.++++
T Consensus 236 ~~a~~l~~~G~d~ivi~~a------~g~~-------~~~~~~i~~l~~~~p~~pvi----~G~v~t~----~~a~~~~~~ 294 (491)
T 1zfj_A 236 ERAEALFEAGADAIVIDTA------HGHS-------AGVLRKIAEIRAHFPNRTLI----AGNIATA----EGARALYDA 294 (491)
T ss_dssp HHHHHHHHHTCSEEEECCS------CTTC-------HHHHHHHHHHHHHCSSSCEE----EEEECSH----HHHHHHHHT
T ss_pred HHHHHHHHcCCCeEEEeee------cCcc-------hhHHHHHHHHHHHCCCCcEe----CCCccCH----HHHHHHHHc
Confidence 4567778899999998871 2432 34566777787777 79998 22 2332 555678899
Q ss_pred CccEEEeCCCCCCCCCCC--CCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCc
Q 012478 178 GFAGIILEDQVSPKGCGH--TRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGAD 255 (462)
Q Consensus 178 GaaGI~IEDq~~PKrCGH--~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD 255 (462)
||++|.+ .--+-..|+- ..+. -.|.-+.+..+. .+... .++-|+|---... .+ .+..+.++|||
T Consensus 295 Gad~I~v-g~g~g~~~~tr~~~~~-~~p~~~~l~~~~---~~~~~--~~ipvia~GGi~~---~~----di~kal~~GA~ 360 (491)
T 1zfj_A 295 GVDVVKV-GIGPGSICTTRVVAGV-GVPQVTAIYDAA---AVARE--YGKTIIADGGIKY---SG----DIVKALAAGGN 360 (491)
T ss_dssp TCSEEEE-CSSCCTTBCHHHHTCC-CCCHHHHHHHHH---HHHHH--TTCEEEEESCCCS---HH----HHHHHHHTTCS
T ss_pred CCCEEEE-CccCCcceEEeeecCC-CCCcHHHHHHHH---HHHhh--cCCCEEeeCCCCC---HH----HHHHHHHcCCc
Confidence 9999998 3111111210 0010 134434443333 33322 3567776322221 11 23344468999
Q ss_pred EEEecC
Q 012478 256 VLFIDA 261 (462)
Q Consensus 256 ~Ifie~ 261 (462)
++++-.
T Consensus 361 ~v~vG~ 366 (491)
T 1zfj_A 361 AVMLGS 366 (491)
T ss_dssp EEEEST
T ss_pred ceeeCH
Confidence 999843
No 432
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=86.08 E-value=5.7 Score=37.49 Aligned_cols=64 Identities=20% Similarity=0.242 Sum_probs=47.6
Q ss_pred HHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEE
Q 012478 103 KLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGI 182 (462)
Q Consensus 103 rl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI 182 (462)
+.++++|.|.|.++- | .. ++..+.+++.+++||++=..-+-.+..++.+.++.+.++||+||
T Consensus 173 ~~a~~~Gad~i~~~~----------~----~~----~~~l~~i~~~~~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv 234 (273)
T 2qjg_A 173 RLGAELGADIVKTSY----------T----GD----IDSFRDVVKGCPAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGV 234 (273)
T ss_dssp HHHHHTTCSEEEECC----------C----SS----HHHHHHHHHHCSSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHcCCCEEEECC----------C----CC----HHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEE
Confidence 788899999888871 1 22 34556777777899999443333357788888889999999999
Q ss_pred Ee
Q 012478 183 IL 184 (462)
Q Consensus 183 ~I 184 (462)
.+
T Consensus 235 ~v 236 (273)
T 2qjg_A 235 AV 236 (273)
T ss_dssp EC
T ss_pred Ee
Confidence 98
No 433
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=86.07 E-value=2.9 Score=41.66 Aligned_cols=62 Identities=15% Similarity=0.172 Sum_probs=43.4
Q ss_pred HHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccch
Q 012478 246 SRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLS 312 (462)
Q Consensus 246 akAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ 312 (462)
++...++|||.|.++.. +.+++++.++.+.+ .. -+...||-++ -+..++.+.|+..++.+..
T Consensus 222 ~~eAl~aGaD~I~LDn~-~~~~l~~av~~i~~--~v-~ieaSGGI~~-~~i~~~a~tGVD~isvG~l 283 (298)
T 3gnn_A 222 LRTALAHGARSVLLDNF-TLDMMRDAVRVTEG--RA-VLEVSGGVNF-DTVRAIAETGVDRISIGAL 283 (298)
T ss_dssp HHHHHHTTCEEEEEESC-CHHHHHHHHHHHTT--SE-EEEEESSCST-TTHHHHHHTTCSEEECGGG
T ss_pred HHHHHHcCCCEEEECCC-CHHHHHHHHHHhCC--CC-eEEEEcCCCH-HHHHHHHHcCCCEEEECCe
Confidence 44455689999999986 45888888886532 11 1222345443 5889999999999998763
No 434
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=85.92 E-value=16 Score=38.61 Aligned_cols=104 Identities=15% Similarity=0.138 Sum_probs=60.6
Q ss_pred HHHHHhHhcCCcEEEec--C-------CCCHHHHHHHHHhC------CCCceeeeeeecCCCCCCCCHHHHHhcCCCEEe
Q 012478 244 RRSRAFADAGADVLFID--A-------LASKEEMKAFCEIS------PLVPKMANMLEGGGKTPILNPLELEELGFKLVA 308 (462)
Q Consensus 244 ~RakAy~eAGAD~Ifie--~-------~~s~eei~~i~~~v------~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~ 308 (462)
+.|+..+++|||+|.+- + ..+.+.+.++.+.+ ..+|++++ ||-.-..+....-.+|.+.|.
T Consensus 355 e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~----GGI~~g~Dv~kaLalGAdaV~ 430 (511)
T 1kbi_A 355 EDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVD----GGVRRGTDVLKALCLGAKGVG 430 (511)
T ss_dssp HHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEE----SSCCSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEE----CCCCCHHHHHHHHHcCCCEEE
Confidence 45788899999999993 2 22345666666655 23565533 343222344555568999999
Q ss_pred ccchHHHHHH----HHHHHHHHHHHcCCCCCCCCCCCHHHHHHhcCcccHHHHHHhh
Q 012478 309 YPLSLIGVSV----RAMQDALTAIKGGRIPSPGSMPSFQEIKETLGFNTYYEEEKRY 361 (462)
Q Consensus 309 yp~~ll~aa~----~Am~~~l~~l~~g~~~~~~~~~s~~e~~~lvg~~~~~~~e~~y 361 (462)
++..++.+.. ..+.+.+..|+++ ++....+.|.....++...+
T Consensus 431 iGr~~l~~~~~~G~~gv~~~l~~l~~e----------l~~~m~~~G~~~i~el~~~~ 477 (511)
T 1kbi_A 431 LGRPFLYANSCYGRNGVEKAIEILRDE----------IEMSMRLLGVTSIAELKPDL 477 (511)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHTCCBGGGCCGGG
T ss_pred ECHHHHHHHHhcChHHHHHHHHHHHHH----------HHHHHHHhCCCcHHHHhHHH
Confidence 9987776543 2333444444432 34555556655555544433
No 435
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=85.75 E-value=5.6 Score=41.32 Aligned_cols=147 Identities=12% Similarity=0.066 Sum_probs=85.0
Q ss_pred HHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhc-CCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012478 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV-SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (462)
Q Consensus 102 Arl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~-~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaa 180 (462)
|+.+.++|++.|=++... . -.++.+.++.|++.. ...+.+=. -.+.. -++...++|+.
T Consensus 67 a~~L~~~Gv~~IEvG~P~----------a----sp~d~~~~~~i~~~~~~~~v~~~~---r~~~~----di~~A~~aG~~ 125 (423)
T 3ivs_A 67 AKALDNFGVDYIELTSPV----------A----SEQSRQDCEAICKLGLKCKILTHI---RCHMD----DARVAVETGVD 125 (423)
T ss_dssp HHHHHHHTCSEEEECCTT----------S----CHHHHHHHHHHHTSCCSSEEEEEE---ESCHH----HHHHHHHTTCS
T ss_pred HHHHHHcCCCEEEEeecc----------c----CHHHHHHHHHHHhcCCCCEEEEee---ccChh----hHHHHHHcCCC
Confidence 456778999999886421 1 134556677776532 22232200 02322 24566779999
Q ss_pred EEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEec
Q 012478 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFID 260 (462)
Q Consensus 181 GI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie 260 (462)
.|+|=-.+.+ -|...+-=.+.++.++++..+++..++.|.+..+.+ .|+. ..+.+..++-+++..++|||.|.+.
T Consensus 126 ~V~i~~s~Sd---~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~-eda~-r~d~~~~~~v~~~~~~~Ga~~i~l~ 200 (423)
T 3ivs_A 126 GVDVVIGTSQ---YLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSS-EDSF-RSDLVDLLSLYKAVDKIGVNRVGIA 200 (423)
T ss_dssp EEEEEEEC----------------CHHHHHHHHHHHHHHTTTCEEEEEE-ESGG-GSCHHHHHHHHHHHHHHCCSEEEEE
T ss_pred EEEEEeeccH---HHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEE-ccCc-CCCHHHHHHHHHHHHHhCCCccccC
Confidence 9999755432 122211123456777777777776666554433332 2443 2467888899999999999999875
Q ss_pred ---CCCCHHHHHHHHHh
Q 012478 261 ---ALASKEEMKAFCEI 274 (462)
Q Consensus 261 ---~~~s~eei~~i~~~ 274 (462)
+..++.++.++++.
T Consensus 201 DTvG~~~P~~v~~lv~~ 217 (423)
T 3ivs_A 201 DTVGCATPRQVYDLIRT 217 (423)
T ss_dssp ETTSCCCHHHHHHHHHH
T ss_pred CccCcCCHHHHHHHHHH
Confidence 44567777766654
No 436
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=85.60 E-value=2.5 Score=42.58 Aligned_cols=143 Identities=13% Similarity=0.111 Sum_probs=75.2
Q ss_pred HHHHHHHhCCc-EEEec-cHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhC
Q 012478 101 SAKLVEKSGFS-FCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAG 178 (462)
Q Consensus 101 SArl~e~aGfd-aI~vS-G~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AG 178 (462)
.|+.++++|++ +|=+- |.-. . -|..+. .-..+.+.+.++.+.+.+++||++=+--++ +..++.+.++.....|
T Consensus 146 ~a~~l~~~g~~d~ielNisCPn--~-~G~~~l-~~~~e~l~~il~av~~~~~~PV~vKi~p~~-~~~~~a~~~~~aga~~ 220 (345)
T 3oix_A 146 ILXMVEASKYQGLVELNLSCPN--V-PGXPQI-AYDFETTDQILSEVFTYFTKPLGIKLPPYF-DIVHFDQAAAIFNXYP 220 (345)
T ss_dssp HHHHHHHSSCCSEEEEECSCCC--S-TTCCCG-GGCHHHHHHHHHHHTTTCCSCEEEEECCCC-CHHHHHHHHHHHTTSC
T ss_pred HHHHHhccCCCcEEEEecCCCC--c-CCchhh-cCCHHHHHHHHHHHHHHhCCCeEEEECCCC-CHHHHHHHHHHhCCCc
Confidence 45777778887 66543 2111 1 133222 124466677778888888999999887663 5555555444444444
Q ss_pred ccEEE----------eCCCC--C-CC-CCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHH
Q 012478 179 FAGII----------LEDQV--S-PK-GCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLR 244 (462)
Q Consensus 179 aaGI~----------IEDq~--~-PK-rCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~ 244 (462)
+++|+ |.... . ++ ..|-..|+++.|.. .+.|+.++++ .++++-|++=-+-.. .+
T Consensus 221 i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a--~~~v~~i~~~---~~~~ipIIg~GGI~s---~~---- 288 (345)
T 3oix_A 221 LTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTA--LANVHAFYKR---LNPSIQIIGTGGVXT---GR---- 288 (345)
T ss_dssp CSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHH--HHHHHHHHTT---SCTTSEEEEESSCCS---HH----
T ss_pred eEEEEeecccccceeeccCccccccccccCCcCCccccHHH--HHHHHHHHHH---cCCCCcEEEECCCCC---hH----
Confidence 44443 32111 0 00 11223345554432 3333333333 233577776654332 23
Q ss_pred HHHHhHhcCCcEEEec
Q 012478 245 RSRAFADAGADVLFID 260 (462)
Q Consensus 245 RakAy~eAGAD~Ifie 260 (462)
.+..+.++|||+|.+-
T Consensus 289 da~~~l~aGAd~V~ig 304 (345)
T 3oix_A 289 DAFEHILCGASMVQIG 304 (345)
T ss_dssp HHHHHHHHTCSEEEES
T ss_pred HHHHHHHhCCCEEEEC
Confidence 4555667999999874
No 437
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=85.59 E-value=10 Score=38.42 Aligned_cols=128 Identities=11% Similarity=0.127 Sum_probs=78.5
Q ss_pred CHHH-HHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcc-cCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHH
Q 012478 163 NAMN-VKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKV-VSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (462)
Q Consensus 163 ~~~n-v~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~L-vp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gld 240 (462)
++.. +.+..+...+.|...+||-= |...+... ...+..+++|+|++++. |+++-|. .|+......+
T Consensus 146 ~~~~~~~~~~~~~~~~Gf~~~K~Kv-------G~~~~~d~~~~~~~~~~~v~avReav---G~d~~l~--vDaN~~~~~~ 213 (388)
T 3tcs_A 146 TPRDEAERLKRLRDTQGFTAFKVRA-------GAEVGRNRDEWPGRTEEIIPTMRREL---GDDVDLL--IDANSCYTPD 213 (388)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEEC-------SCTTCTTCCSSTTHHHHHHHHHHHHH---CSSSEEE--EECTTCCCHH
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEcc-------CCCcccccccchhHHHHHHHHHHHHh---CCCCeEE--EeCCCCcCHH
Confidence 4543 44444555678999999932 22111111 01223456777777664 6676664 4777778899
Q ss_pred HHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHH---HHhcC-CCEEeccch
Q 012478 241 ESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELG-FKLVAYPLS 312 (462)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~e---L~~lG-v~~V~yp~~ 312 (462)
+|++-++++.+.|.+ |+|-+ .+.+.++++.+.++ +|+..+ .. ..+..+ +-+.| +..+..-..
T Consensus 214 ~A~~~~~~l~~~~i~--~iEeP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~a~d~v~~d~~ 282 (388)
T 3tcs_A 214 RAIEVGHMLQDHGFC--HFEEPCPYWELAQTKQVTDALD-IDVTGG-----EQ--DCDLPTWQRMIDMRAVDIVQPDIL 282 (388)
T ss_dssp HHHHHHHHHHHTTCC--EEECCSCTTCHHHHHHHHHHCS-SCEEEC-----TT--CCCHHHHHHHHHHTCCSEECCCHH
T ss_pred HHHHHHHHHhhcCCe--EEECCCCccCHHHHHHHHHhcC-CCEEcC-----Cc--cCCHHHHHHHHHcCCCCEEEeCcc
Confidence 999999999998765 56654 26788999988876 676543 11 234544 44445 555555443
No 438
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=85.54 E-value=22 Score=36.13 Aligned_cols=146 Identities=12% Similarity=0.071 Sum_probs=82.1
Q ss_pred HHHHHhhcCCcEEEeCCCCCCCH-HHHHHHHHHHH-HhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHH
Q 012478 142 GQLITQAVSIPVIGDGDNGYGNA-MNVKRTVKGYI-KAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARK 219 (462)
Q Consensus 142 ~~~I~ra~~iPVIaD~DtGyG~~-~nv~rtVk~l~-~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~ 219 (462)
++.+.+. +.+|++|+=.| +. ..+...++.+. +.||+.|.+---. |.. -|++++++..
T Consensus 154 v~~lr~~-g~~VflDlK~~--DIgnTva~ya~a~~~~lgaD~vTVhp~~---------G~d---------sl~~a~~~~~ 212 (353)
T 2ffc_A 154 FDYLHHL-NVPTILDIKMN--DIGNTVKHYRKFIFDYLRSDSCTANIYM---------GTQ---------MLRDICLDEE 212 (353)
T ss_dssp HHHHHHH-TCCEEEEEEEC--CCHHHHHHHHHHHHTTSCCSEEEECCTT---------CST---------THHHHHBCTT
T ss_pred HHHHHHc-CCcEEEEEecC--chHHHHHHHHHHHHHHcCCCEEEEeCCC---------CHH---------HHHHHHHHhc
Confidence 3444333 89999999886 42 23445566664 6999999994431 211 2333331111
Q ss_pred hhCC---CeEEEEecchhhc---------c--cH-HHHHHHHHHhH-------hcCCcEEEecCCCCHHHHHHHHHhCCC
Q 012478 220 ESGS---DIVIVARTDSRQA---------L--SL-EESLRRSRAFA-------DAGADVLFIDALASKEEMKAFCEISPL 277 (462)
Q Consensus 220 ~~g~---d~vIiARTDA~~~---------~--gl-deAI~RakAy~-------eAGAD~Ifie~~~s~eei~~i~~~v~~ 277 (462)
+. ..+|.++|-.... . .+ +.++++++.+- ..|....++ +..+.++++.+.+..+.
T Consensus 213 --~k~~~gV~VL~lTSN~~~~dlq~~~~~~g~~v~e~V~~~A~~~g~~~~~~~~~G~~g~VV-Gats~~el~~IR~~~~~ 289 (353)
T 2ffc_A 213 --CKRYYSTFVLVKTTNADSHIFQNRLSLDGKEAYVVIAEEVQKMAKQLHLEENGEFVGFVV-GANCYDEIKKIRELFPD 289 (353)
T ss_dssp --SCCBCEEEEEEECSSTTTHHHHTTCEETTEEHHHHHHHHHHHHHHHTTTGGGTCCEEEEE-CTTCHHHHHHHHHHCTT
T ss_pred --CCCcceEEEehhcCCCCHHHHHHhhccCCCCHHHHHHHHHHHhCccccccCCCCCCCEEE-eCCCHHHHHHHHHhCCC
Confidence 23 6788889874211 1 23 34455555443 345444444 34567888888777654
Q ss_pred CceeeeeeecCCCCCCCCHHHHHhcCCC------EEeccchHHH
Q 012478 278 VPKMANMLEGGGKTPILNPLELEELGFK------LVAYPLSLIG 315 (462)
Q Consensus 278 vP~~~N~l~~~g~tP~ls~~eL~~lGv~------~V~yp~~ll~ 315 (462)
.+.+ ++|-+ ...=+++++.+.|.. .++.+-..+.
T Consensus 290 ~~iL---tPGIg-aqGGD~~~a~~~Gad~~~~~~iIvVGR~I~~ 329 (353)
T 2ffc_A 290 CYIL---APGVG-AQKGDLRKMLCNGYSKNYEKVLINVGRAITK 329 (353)
T ss_dssp CCEE---ECCBS-TTCBCHHHHHHHHCCSSGGGEEEEECHHHHT
T ss_pred CeEE---eCccc-CCCCCHHHHHHcCCCcccCcEEEEECHHHcC
Confidence 3322 22211 111268899889987 7777776664
No 439
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=85.50 E-value=6.9 Score=40.20 Aligned_cols=151 Identities=14% Similarity=0.060 Sum_probs=86.5
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCC------CCCCC----C-------CCCcccCHH----HHH
Q 012478 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSP------KGCGH----T-------RGRKVVSRE----EAV 208 (462)
Q Consensus 150 ~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~P------KrCGH----~-------~gk~Lvp~e----e~~ 208 (462)
.+|+-+-. +..++..+.+.++.+.+.|..++||--+... ..+|+ . ......+.+ ..+
T Consensus 138 ~v~~y~~~--~~~~~~~~~~~~~~~~~~Gf~~iKikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (426)
T 4e4f_A 138 GVMVYCHT--TGHSIDEVLDDYAKHRDQGFKAIRVQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWSTEKYLDFTP 215 (426)
T ss_dssp SEEEEEEE--CCSSHHHHHHHHHHHHHTTCSEEEECC-------------------CCSEESSSCCEEEECHHHHHHHHH
T ss_pred ceeEeEeC--CCCCHHHHHHHHHHHHHcCCCEEEEeccCCccccccccccccccccccccccccccccccchhHHHHHHH
Confidence 36666542 2235677777788888899999999422100 00010 0 000111122 235
Q ss_pred HHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCC-CCHHHHHHHHHhCCCCceeeeeeec
Q 012478 209 MRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMANMLEG 287 (462)
Q Consensus 209 ~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N~l~~ 287 (462)
++|+|++++. |+++.|.. |+.....+++|++-++++.+.|.+.|=-+.. .+.+.++++.+.++ +|+.++=..
T Consensus 216 e~v~avR~a~---G~d~~L~v--DaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~-iPIa~dE~~- 288 (426)
T 4e4f_A 216 KLFEAVRDKF---GFNEHLLH--DMHHRLTPIEAARFGKSVEDYRLFWMEDPTPAENQACFRLIRQHTV-TPIAVGEVF- 288 (426)
T ss_dssp HHHHHHHHHH---TTSSEEEE--ECTTCSCHHHHHHHHHHTGGGCCSEEECCSCCSSGGGGHHHHTTCC-SCEEECTTC-
T ss_pred HHHHHHHHHh---CCCCEEEE--ECCCCCCHHHHHHHHHHHhhcCCCEEECCCChHHHHHHHHHHhcCC-CCEEeCCCc-
Confidence 6777776664 67776654 7777778999999999999998765432222 24567788888765 676543111
Q ss_pred CCCCCCCCHHHHHhcC-CCEEeccch
Q 012478 288 GGKTPILNPLELEELG-FKLVAYPLS 312 (462)
Q Consensus 288 ~g~tP~ls~~eL~~lG-v~~V~yp~~ 312 (462)
.+ .....++-+.| +..|..-..
T Consensus 289 --~~-~~~~~~~i~~ga~d~v~~k~~ 311 (426)
T 4e4f_A 289 --NS-IWDCKQLIEEQLIDYIRTTIT 311 (426)
T ss_dssp --CS-GGGTHHHHHTTCCSEECCCTT
T ss_pred --CC-HHHHHHHHHcCCCCEEEeCcc
Confidence 01 12345566666 566655443
No 440
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=85.25 E-value=4.4 Score=42.36 Aligned_cols=99 Identities=20% Similarity=0.274 Sum_probs=72.3
Q ss_pred CCHHHHHHHHHHHHH-hCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHH
Q 012478 162 GNAMNVKRTVKGYIK-AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (462)
Q Consensus 162 G~~~nv~rtVk~l~~-AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gld 240 (462)
.+++.+.+.++++.+ .|...+||-- |. .+.++-+++|+|++++. +++.| +.|+-.....+
T Consensus 199 ~~~e~~~~~a~~~~~~~Gf~~~KlKv-------G~------~~~~~Di~rv~avRea~----pd~~L--~vDaN~~w~~~ 259 (470)
T 3p0w_A 199 MTPAAIARLAEAATERYGFADFKLKG-------GV------MPGAEEMEAIAAIKARF----PHARV--TLDPNGAWSLN 259 (470)
T ss_dssp CSHHHHHHHHHHHHHHHCCSEEEEEC-------SS------SCHHHHHHHHHHHHHHC----TTSEE--EEECTTBBCHH
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEeC-------CC------CCHHHHHHHHHHHHHhC----CCCeE--EeeCCCCCCHH
Confidence 357788888888877 6999999932 22 13455678999988873 45544 45888888999
Q ss_pred HHHHHHHHhHhcCCcEEEecCCC---C----HHHHHHHHHhCCCCceeee
Q 012478 241 ESLRRSRAFADAGADVLFIDALA---S----KEEMKAFCEISPLVPKMAN 283 (462)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~~~---s----~eei~~i~~~v~~vP~~~N 283 (462)
+|++-++++++. ..|+|-+- + .+.++++.+..+ +|+..+
T Consensus 260 ~Ai~~~~~Le~~---l~~iEeP~~~~d~~~~~~~~~~l~~~~~-iPIa~d 305 (470)
T 3p0w_A 260 EAIALCKGQGHL---VAYAEDPCGPEAGYSGREVMAEFKRATG-IPTATN 305 (470)
T ss_dssp HHHHHHTTCTTT---CSEEESCBCCBTTBCHHHHHHHHHHHHC-CCEEES
T ss_pred HHHHHHHhcccc---ceeecCCCChhhccchHHHHHHHHhcCC-CCEEeC
Confidence 999999999864 55887652 2 467888988876 677654
No 441
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=85.19 E-value=22 Score=34.41 Aligned_cols=164 Identities=12% Similarity=0.099 Sum_probs=83.4
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCC--CCCCCCCCCCcc-----------cCHHHHHHHHHHHHHH
Q 012478 151 IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVS--PKGCGHTRGRKV-----------VSREEAVMRIKAAVDA 217 (462)
Q Consensus 151 iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~--PKrCGH~~gk~L-----------vp~ee~~~kI~AA~~A 217 (462)
..+|.=+-.||-+.....+.++.++++||+.|+|- -.+ |- .+|..+ +..+...+-|+..++.
T Consensus 18 ~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElg-iPfSDP~----aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~ 92 (267)
T 3vnd_A 18 GAFVPFVTIGDPSPELSLKIIQTLVDNGADALELG-FPFSDPL----ADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQ 92 (267)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEE-CCCSCCT----TCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEC-CCCCCCC----CCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc
Confidence 44555556688778889999999999999999983 111 21 122111 1222333344443332
Q ss_pred HHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCCCH--HHHHHHHHhCCCCceeeeeeecCCCCCCCC
Q 012478 218 RKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASK--EEMKAFCEISPLVPKMANMLEGGGKTPILN 295 (462)
Q Consensus 218 r~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~s~--eei~~i~~~v~~vP~~~N~l~~~g~tP~ls 295 (462)
. ...+++++.--+-....+++.- ++.+.+||+|.+.++-++-+ +++.+.++... +... -++ +|.-+
T Consensus 93 ~--~~~Pivlm~Y~npv~~~g~e~f---~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~g-l~~i-~li-----aP~t~ 160 (267)
T 3vnd_A 93 H--PDMPIGLLLYANLVFANGIDEF---YTKAQAAGVDSVLIADVPVEESAPFSKAAKAHG-IAPI-FIA-----PPNAD 160 (267)
T ss_dssp C--TTCCEEEEECHHHHHHHCHHHH---HHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTT-CEEE-CEE-----CTTCC
T ss_pred C--CCCCEEEEecCcHHHHhhHHHH---HHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcC-CeEE-EEE-----CCCCC
Confidence 1 1245666643332233455544 45566899999988776542 35555555543 2221 111 22224
Q ss_pred HHHHH---hcC--CCEE--eccchHHHHH-HHHHHHHHHHHHcC
Q 012478 296 PLELE---ELG--FKLV--AYPLSLIGVS-VRAMQDALTAIKGG 331 (462)
Q Consensus 296 ~~eL~---~lG--v~~V--~yp~~ll~aa-~~Am~~~l~~l~~g 331 (462)
.+.++ +.+ |=.+ +.|.+..+.. ...+.+.++.+++-
T Consensus 161 ~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~ 204 (267)
T 3vnd_A 161 ADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEF 204 (267)
T ss_dssp HHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHh
Confidence 44444 444 4222 2344444432 23356777777763
No 442
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=85.14 E-value=8.4 Score=38.43 Aligned_cols=133 Identities=20% Similarity=0.365 Sum_probs=86.4
Q ss_pred CCcEEEeCCCCCCC--HHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEE
Q 012478 150 SIPVIGDGDNGYGN--AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVI 227 (462)
Q Consensus 150 ~iPVIaD~DtGyG~--~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vI 227 (462)
.+|+.+- .|+++ .....+.++++.+.|...+||- .|. +.++-+++|++++++. |+++.|
T Consensus 131 ~vp~~~~--~g~~~~~~~~~~~~a~~~~~~G~~~~KiK-------vG~-------~~~~d~~~v~avr~a~---g~~~~l 191 (372)
T 3cyj_A 131 EVPVYGS--GGFTSYPLRRLQEQLGGWAAAGIPRVKMK-------VGR-------EPEKDPERVRAAREAI---GESVEL 191 (372)
T ss_dssp SEEEEEE--CCCTTSCHHHHHHHHHHHHHTTCCEEEEE-------CCS-------SGGGHHHHHHHHHHHH---CTTSEE
T ss_pred CceEEEE--cCCCCCCHHHHHHHHHHHHHcCCCEEEEc-------CCC-------CHHHHHHHHHHHHHHh---CCCCeE
Confidence 3666543 34443 4557777888888999999982 232 3345578888887764 566544
Q ss_pred EEecchhhcccHHHHHHHHHHhHhc-CCcEEEecCC---CCHHHHHHHHHhCCC-CceeeeeeecCCCCCCCCHHHHHh-
Q 012478 228 VARTDSRQALSLEESLRRSRAFADA-GADVLFIDAL---ASKEEMKAFCEISPL-VPKMANMLEGGGKTPILNPLELEE- 301 (462)
Q Consensus 228 iARTDA~~~~gldeAI~RakAy~eA-GAD~Ifie~~---~s~eei~~i~~~v~~-vP~~~N~l~~~g~tP~ls~~eL~~- 301 (462)
+-|+-....+++|++.++++.+. + ..|+|-+ .+.+.++++.+.++. +|+... .. ..+..++.+
T Consensus 192 --~vDaN~~~~~~~a~~~~~~l~~~~~--i~~iEqP~~~~d~~~~~~l~~~~~~~ipIa~d-----E~--~~~~~~~~~~ 260 (372)
T 3cyj_A 192 --MVDANGAYTRKQALYWAGAFAREAG--ISYLEEPVSSEDREGLRLLRDRGPGGVAIAAG-----EY--EWTLPQLHDL 260 (372)
T ss_dssp --EEECTTCSCHHHHHHHHHHHHHHHC--CCEEECSSCTTCHHHHHHHHHHSCTTCEEEEC-----TT--CCSHHHHHHH
T ss_pred --EEECCCCCCHHHHHHHHHHHHhhcC--CcEEECCCCcccHHHHHHHHHhCCCCCCEECC-----CC--ccCHHHHHHH
Confidence 45777777899999999998886 5 5588764 367888899888753 465432 11 234455444
Q ss_pred -cCCCEEeccch
Q 012478 302 -LGFKLVAYPLS 312 (462)
Q Consensus 302 -lGv~~V~yp~~ 312 (462)
-.++.+..-..
T Consensus 261 ~~a~d~i~ik~~ 272 (372)
T 3cyj_A 261 AGCVDILQADVT 272 (372)
T ss_dssp HTTCSEEEECTT
T ss_pred hCCCCEEecCch
Confidence 34666665333
No 443
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=85.01 E-value=2.8 Score=38.13 Aligned_cols=167 Identities=12% Similarity=0.018 Sum_probs=85.5
Q ss_pred HHHHHHhCCcEEEeccHHHHhhhccC-CCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012478 102 AKLVEKSGFSFCFTSGFSISAARLAL-PDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (462)
Q Consensus 102 Arl~e~aGfdaI~vSG~avSas~lG~-PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaa 180 (462)
++.++++|.+.+.+-- .-|. +- .++ .-++.++.|.+.++.|+.+|. ..-++. +.++.+.++|++
T Consensus 22 ~~~~~~~G~~~i~~~~------~dg~~~~--~~~--~g~~~i~~i~~~~~~~~~v~l--~v~d~~---~~i~~~~~~gad 86 (220)
T 2fli_A 22 LARIEETDAEYVHIDI------MDGQFVP--NIS--FGADVVASMRKHSKLVFDCHL--MVVDPE---RYVEAFAQAGAD 86 (220)
T ss_dssp HHHHHHTTCCEEEEEE------EBSSSSS--CBC--BCHHHHHHHHTTCCSEEEEEE--ESSSGG---GGHHHHHHHTCS
T ss_pred HHHHHHcCCCEEEEEe------ecCCCCC--ccc--cCHHHHHHHHHhCCCCEEEEE--eecCHH---HHHHHHHHcCCC
Confidence 4667788998865441 0121 11 112 124556677776677887762 223432 245788889999
Q ss_pred EEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEec
Q 012478 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFID 260 (462)
Q Consensus 181 GI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie 260 (462)
+|++-+... -..++.++.+ +. .|..+.+-. +.. .. .++.++|. .++|.|++.
T Consensus 87 ~v~vh~~~~------------~~~~~~~~~~---~~----~g~~i~~~~--~~~--t~----~e~~~~~~-~~~d~vl~~ 138 (220)
T 2fli_A 87 IMTIHTEST------------RHIHGALQKI---KA----AGMKAGVVI--NPG--TP----ATALEPLL-DLVDQVLIM 138 (220)
T ss_dssp EEEEEGGGC------------SCHHHHHHHH---HH----TTSEEEEEE--CTT--SC----GGGGGGGT-TTCSEEEEE
T ss_pred EEEEccCcc------------ccHHHHHHHH---HH----cCCcEEEEE--cCC--CC----HHHHHHHH-hhCCEEEEE
Confidence 997733310 0112222222 21 122222222 111 01 12344443 569988553
Q ss_pred CC--------CC---HHHHHHHHHhCC----CCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012478 261 AL--------AS---KEEMKAFCEISP----LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316 (462)
Q Consensus 261 ~~--------~s---~eei~~i~~~v~----~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~a 316 (462)
+. .. .+.++++.+..+ .+|. ...||-+| -+..++.++|...++.+..++.+
T Consensus 139 ~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i----~v~GGI~~-~~~~~~~~~Gad~vvvGsai~~~ 204 (220)
T 2fli_A 139 TVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDI----EVDGGVDN-KTIRACYEAGANVFVAGSYLFKA 204 (220)
T ss_dssp SSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEE----EEESSCCT-TTHHHHHHHTCCEEEESHHHHTS
T ss_pred EECCCCcccccCHHHHHHHHHHHHHHHhcCCCceE----EEECcCCH-HHHHHHHHcCCCEEEEChHHhCC
Confidence 21 11 234454444321 2332 22346554 47888999999999999887764
No 444
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=84.83 E-value=28 Score=33.33 Aligned_cols=205 Identities=12% Similarity=0.154 Sum_probs=109.7
Q ss_pred HHHHHHhCCCceEec--cc-CChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEe
Q 012478 80 SLRQILELPGVHQGP--AC-FDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGD 156 (462)
Q Consensus 80 ~LR~ll~~~~~iv~p--~a-yDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD 156 (462)
+||++|+++++.+.. .. -++-.+..+..+|||+|++= +.| +..+.+.+..+++.+ +..+.+++|=
T Consensus 5 ~~k~~l~~g~~~~g~~~~~~~~p~~~e~a~~~g~D~vilD----------lEh-av~~~~k~~~~l~a~-~~~~~~~~VR 72 (261)
T 3qz6_A 5 FLKKKLSAGKSVVGTMLNLVYNPDIVRIYAEAGLDYFIVD----------CEH-AAYTFREINHLVSVA-KNAGVSVLVR 72 (261)
T ss_dssp CHHHHHHTTCCEEEEEESSCCCTTHHHHHHHTTCSEEEEE----------SSS-SCCCHHHHHHHHHHH-HHHTCEEEEE
T ss_pred HHHHHHHCCCCEEEEEEecCCCHHHHHHHhcCCcCEEEEe----------ccC-CCCCHHHHHHHHHHH-hhcCCeEEEE
Confidence 588889888775322 22 45667777778899999864 222 123334444444443 3346777777
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHH-------------------
Q 012478 157 GDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDA------------------- 217 (462)
Q Consensus 157 ~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~A------------------- 217 (462)
.... ++ ..++.+.++|+.||.+ ||.. +.++. +++.++..-
T Consensus 73 Vn~~--~~----~di~~~ld~G~~gI~l-----P~v~---------saed~-~~~~~~~~~~p~G~Rg~~~~r~~~~g~~ 131 (261)
T 3qz6_A 73 IPQV--DR----AHVQRLLDIGAEGFMI-----PGVQ---------SAETM-RETVRLAKYPPLGERGVGGSIVTDFKPV 131 (261)
T ss_dssp CSSC--CH----HHHHHHHHHTCCEEEE-----TTCC---------SHHHH-HHHHHHHSCTTTCCCCCCCGGGGTTCCC
T ss_pred eCCC--CH----HHHHHHHhcCCCEEEE-----CCcC---------CHHHH-HHHHHHhccCCCCCcCcccchhhhcccc
Confidence 6653 34 2466777899999987 2211 22333 333322210
Q ss_pred -----HHhhCCCeEEEEecchhhcccHHHHHHHHHHhHh-cCCcEEEecC--------C----CCHHH---HHHHH---H
Q 012478 218 -----RKESGSDIVIVARTDSRQALSLEESLRRSRAFAD-AGADVLFIDA--------L----ASKEE---MKAFC---E 273 (462)
Q Consensus 218 -----r~~~g~d~vIiARTDA~~~~gldeAI~RakAy~e-AGAD~Ifie~--------~----~s~ee---i~~i~---~ 273 (462)
....+.++.|++-.+.. +++..+..+.+ -|.|.+++-. . ..++. +++++ +
T Consensus 132 ~~~~y~~~~~~~~~v~~mIEt~------~av~~~~eIaa~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~ 205 (261)
T 3qz6_A 132 NWAEWVQERNDEIFIMAQIEHV------KAVEDIDSILAVQGVDAVIFGPRDLSNDLGIIGQTEHPKVYECYEKVYRAAD 205 (261)
T ss_dssp CHHHHHHHHHTTCEEEEEECCH------HHHHTHHHHHTSTTCCEEEECHHHHHHHTTCTTCTTCHHHHHHHHHHHHHHH
T ss_pred chhhHHhcCCCCeEEEEEECCH------HHHHHHHHHhCCCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHH
Confidence 00011345666665542 34555666664 3899999731 1 11221 12222 2
Q ss_pred hCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHHHHHHHHHHHHHHHHc
Q 012478 274 ISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVSVRAMQDALTAIKG 330 (462)
Q Consensus 274 ~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~aa~~Am~~~l~~l~~ 330 (462)
.. ++|.. +..+ .|......|.++||+.++++.-... ...++++.+..+++
T Consensus 206 aa-G~~~g--~~~~---~~~~~~~~~~~~G~~~~s~~~D~~~-l~~~~~~~~~~~~~ 255 (261)
T 3qz6_A 206 RQ-GVVKG--FFTA---ADAAKMGWAVERGAQMLLWSGDVAA-LQTYTAKGVKTIKE 255 (261)
T ss_dssp HH-TCEEE--EEES---SCGGGGHHHHHTTCCEEEEEEHHHH-HHHHHHHHHHHHHT
T ss_pred Hh-CCCEE--EEeC---CHHHHHHHHHHCCCCEEEEhhHHHH-HHHHHHHHHHHHHH
Confidence 22 23432 2221 3432227789999999999886332 23445555555654
No 445
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=84.67 E-value=1.6 Score=43.21 Aligned_cols=87 Identities=23% Similarity=0.197 Sum_probs=54.3
Q ss_pred HHHHHHHHHhh-CCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCC----CCceeeeee
Q 012478 211 IKAAVDARKES-GSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISP----LVPKMANML 285 (462)
Q Consensus 211 I~AA~~Ar~~~-g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~----~vP~~~N~l 285 (462)
|..++++.++. +.+..|..-+| .++ +++...++|||.|+++.+ +.++++++++.+. .+|+ .
T Consensus 179 i~~av~~ar~~~~~~~~I~VEV~-----tle----ea~eA~~aGaD~I~LDn~-~~e~l~~av~~l~~~~~~v~i----e 244 (285)
T 1o4u_A 179 AERAVQEVRKIIPFTTKIEVEVE-----NLE----DALRAVEAGADIVMLDNL-SPEEVKDISRRIKDINPNVIV----E 244 (285)
T ss_dssp HHHHHHHHHTTSCTTSCEEEEES-----SHH----HHHHHHHTTCSEEEEESC-CHHHHHHHHHHHHHHCTTSEE----E
T ss_pred HHHHHHHHHHhCCCCceEEEEeC-----CHH----HHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCceE----E
Confidence 44455444433 33345555433 233 455567799999999886 5578888777652 2222 2
Q ss_pred ecCCCCCCCCHHHHHhcCCCEEeccch
Q 012478 286 EGGGKTPILNPLELEELGFKLVAYPLS 312 (462)
Q Consensus 286 ~~~g~tP~ls~~eL~~lGv~~V~yp~~ 312 (462)
..||-++ -+..++.+.|+..++.+..
T Consensus 245 ASGGIt~-eni~~~a~tGVD~IsvGsl 270 (285)
T 1o4u_A 245 VSGGITE-ENVSLYDFETVDVISSSRL 270 (285)
T ss_dssp EEECCCT-TTGGGGCCTTCCEEEEGGG
T ss_pred EECCCCH-HHHHHHHHcCCCEEEEeHH
Confidence 2235444 4789999999999998763
No 446
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=84.62 E-value=5.9 Score=39.73 Aligned_cols=131 Identities=11% Similarity=0.092 Sum_probs=76.5
Q ss_pred HHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEE-eCCC--CCC-CHHHHHHHHHHHHHh
Q 012478 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIG-DGDN--GYG-NAMNVKRTVKGYIKA 177 (462)
Q Consensus 102 Arl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIa-D~Dt--GyG-~~~nv~rtVk~l~~A 177 (462)
|+.++++|+|++++.. |-....+-+++.+|-+.|++++++||+. +.|. |+. .++.+.+.+++ .-
T Consensus 119 a~~A~~~Gadavlv~~----------P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~--~p 186 (343)
T 2v9d_A 119 SQHAQQAGADGIVVIN----------PYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLADS--RS 186 (343)
T ss_dssp HHHHHHHTCSEEEEEC----------CSSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHHH--CT
T ss_pred HHHHHhcCCCEEEECC----------CCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHHHh--CC
Confidence 5667788999998763 1112247899999999999999999876 7764 543 34445544422 25
Q ss_pred CccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEE
Q 012478 178 GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVL 257 (462)
Q Consensus 178 GaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~I 257 (462)
.+.|||-.. |. .+ ++...++.....+++|.|..=.|.. ...+..+|++.+
T Consensus 187 nIvgiKdss-------gd--------~~----~~~~l~~~~~~~~~~f~v~~G~D~~-----------~l~~l~~Ga~G~ 236 (343)
T 2v9d_A 187 NIIGIKDTI-------DS--------VA----HLRSMIHTVKGAHPHFTVLCGYDDH-----------LFNTLLLGGDGA 236 (343)
T ss_dssp TEEEEEECC-------SC--------HH----HHHHHHHHHHHHCTTCEEEESSGGG-----------HHHHHHTTCCEE
T ss_pred CEEEEEeCC-------CC--------HH----HHHHHHHhcCCCCCCEEEEECcHHH-----------HHHHHHCCCCEE
Confidence 789998322 21 12 3333332221001478776555543 223445899987
Q ss_pred EecCC-CCHHHHHHHHHh
Q 012478 258 FIDAL-ASKEEMKAFCEI 274 (462)
Q Consensus 258 fie~~-~s~eei~~i~~~ 274 (462)
+--.- --++.+.++.+.
T Consensus 237 is~~anv~P~~~~~l~~a 254 (343)
T 2v9d_A 237 ISASGNFAPQVSVNLLKA 254 (343)
T ss_dssp CCGGGTTCHHHHHHHHHH
T ss_pred EeCHHHhHHHHHHHHHHH
Confidence 64221 234566666554
No 447
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=84.42 E-value=9.2 Score=39.47 Aligned_cols=145 Identities=21% Similarity=0.198 Sum_probs=81.0
Q ss_pred HhCCcEEEeccHHHHhhhccCCCCCC-----CCHHHHHHHHHHHHhhc----CCcEEEeC-CCC-C-CC--HHH---HH-
Q 012478 107 KSGFSFCFTSGFSISAARLALPDTGF-----ISYGEMVDQGQLITQAV----SIPVIGDG-DNG-Y-GN--AMN---VK- 168 (462)
Q Consensus 107 ~aGfdaI~vSG~avSas~lG~PD~g~-----vsl~Eml~~~~~I~ra~----~iPVIaD~-DtG-y-G~--~~n---v~- 168 (462)
++|.|.|.+-+|+.+ ..++.+.+. ....|+...+-++++.+ ...|..++ ++| | ++ ... .+
T Consensus 65 ~AGAdII~TNTf~A~--~~~l~~~G~~~~~~~~~~eln~~Av~LAreAa~~~~~~VAGsIGP~g~~l~~~s~eel~~~~~ 142 (406)
T 1lt8_A 65 RAGSNVMQTFTFYAS--EDKLENRGNYVLEKISGQEVNEAAADIARQVADEGDALVAGGVSQTPSYLSAKSETEVKKVFL 142 (406)
T ss_dssp HTTCSEEECSCTTCS--SCC-------------CHHHHHHHHHHHHHHHTTTTCEEEEEECCCHHHHTTCHHHHHHHHHH
T ss_pred HhCccceeccccccC--HHHHHhcCCccchhHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCCcccccCCCCHHHHHHHHH
Confidence 589999998898854 566666553 23457777666666532 23455554 222 1 11 122 22
Q ss_pred HHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecch---hhcccHHHHHHH
Q 012478 169 RTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDS---RQALSLEESLRR 245 (462)
Q Consensus 169 rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA---~~~~gldeAI~R 245 (462)
+.++.|+++||+.+-+|-.. +..|+. |++++.++.+.+++|---.+. .....+++++..
T Consensus 143 eqi~~L~~~GvDlll~ETi~--------------~~~Eak----aa~~a~~~~~lPv~iS~T~~~~G~l~G~~~~~~~~~ 204 (406)
T 1lt8_A 143 QQLEVFMKKNVDFLIAEYFE--------------HVEEAV----WAVETLIASGKPVAATMAIGPEGDLHGVPPGEAAVR 204 (406)
T ss_dssp HHHHHHHHHTCSEEEECCCS--------------CHHHHH----HHHHHHGGGTSCEEEEECCBTTBCTTCCCHHHHHHH
T ss_pred HHHHHHhhCCCCEEEEcccC--------------CHHHHH----HHHHHHHHhCCcEEEEEEECCCCCcCCCcHHHHHHH
Confidence 33677889999999999753 345553 334444434555555543321 223345655544
Q ss_pred HHHhHhcCCcEEEecCCCCHHHHHHHHHh
Q 012478 246 SRAFADAGADVLFIDALASKEEMKAFCEI 274 (462)
Q Consensus 246 akAy~eAGAD~Ifie~~~s~eei~~i~~~ 274 (462)
+.++|+|+|-+-|...++++..+.+.
T Consensus 205 ---l~~~~~~avGvNC~~gP~~~~~~l~~ 230 (406)
T 1lt8_A 205 ---LVKAGASIIGVNCHFDPTISLKTVKL 230 (406)
T ss_dssp ---HHTTTCSEEEEESSSCHHHHHHHHHH
T ss_pred ---hhcCCCCEEEecCCCCHHHHHHHHHH
Confidence 45579999999996556666655543
No 448
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=84.32 E-value=4.2 Score=40.30 Aligned_cols=100 Identities=17% Similarity=0.149 Sum_probs=62.7
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHH
Q 012478 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeA 242 (462)
+...+.+.++++++.||+-|=|-.+.. ..|-+-++.+|-.+|+.-++++..+. ++.|-- |.... ++
T Consensus 44 ~~~~a~~~a~~~v~~GAdiIDIGgeST------rPga~~v~~~eE~~Rv~pvi~~l~~~--~vpiSI--DT~~~----~V 109 (294)
T 2y5s_A 44 ARDDALRRAERMIAEGADLLDIGGEST------RPGAPPVPLDEELARVIPLVEALRPL--NVPLSI--DTYKP----AV 109 (294)
T ss_dssp CTTHHHHHHHHHHHTTCSEEEEESSCC------STTCCCCCHHHHHHHHHHHHHHHGGG--CSCEEE--ECCCH----HH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcC------CCCCCCCCHHHHHHHHHHHHHHHhhC--CCeEEE--ECCCH----HH
Confidence 456677788999999999998865431 13445678888888888877776532 333322 33322 22
Q ss_pred HHHHHHhHhcCCcEEE-ecCCCCHHHHHHHHHhCCCCcee
Q 012478 243 LRRSRAFADAGADVLF-IDALASKEEMKAFCEISPLVPKM 281 (462)
Q Consensus 243 I~RakAy~eAGAD~If-ie~~~s~eei~~i~~~v~~vP~~ 281 (462)
+++..++||++|- +.+..+ +++..+++... +|..
T Consensus 110 ---a~aAl~aGa~iINdVsg~~d-~~m~~~~a~~~-~~vV 144 (294)
T 2y5s_A 110 ---MRAALAAGADLINDIWGFRQ-PGAIDAVRDGN-SGLC 144 (294)
T ss_dssp ---HHHHHHHTCSEEEETTTTCS-TTHHHHHSSSS-CEEE
T ss_pred ---HHHHHHcCCCEEEECCCCCc-hHHHHHHHHhC-CCEE
Confidence 3344456999996 444443 46777777664 4544
No 449
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=84.24 E-value=3.6 Score=39.93 Aligned_cols=166 Identities=16% Similarity=0.162 Sum_probs=96.5
Q ss_pred HHHhCCcEEEec-cHHHHhhhccCCCC------------CCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHH---HHH
Q 012478 105 VEKSGFSFCFTS-GFSISAARLALPDT------------GFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAM---NVK 168 (462)
Q Consensus 105 ~e~aGfdaI~vS-G~avSas~lG~PD~------------g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~---nv~ 168 (462)
++++|+|.|=++ -+. -.+.|. .-++++..++.++.++.. +|++. .||-|+. .+.
T Consensus 37 l~~~GaD~iElGiPfS-----DP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~--~Pivl---m~Y~N~i~~~G~e 106 (252)
T 3tha_A 37 LDQSPIDILELGVAYS-----DPIADGEIIADAAKIALDQGVDIHSVFELLARIKTK--KALVF---MVYYNLIFSYGLE 106 (252)
T ss_dssp GGGSSCSEEEEECCCS-----CCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCS--SEEEE---ECCHHHHHHHCHH
T ss_pred HHHcCCCEEEECCCCC-----CCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcC--CCEEE---EeccCHHHHhhHH
Confidence 456788888766 221 122232 136778888888887543 79876 4788863 356
Q ss_pred HHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCe-EEEEecchhhcccHHHHHHHHH
Q 012478 169 RTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDI-VIVARTDSRQALSLEESLRRSR 247 (462)
Q Consensus 169 rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~-vIiARTDA~~~~gldeAI~Rak 247 (462)
+-++++.++|++|+.|=|= |.||..+-.+++.+. |-++ ++++=|.. .+|.+
T Consensus 107 ~F~~~~~~aGvdG~IipDL---------------P~eE~~~~~~~~~~~----Gl~~I~lvaP~t~---------~eRi~ 158 (252)
T 3tha_A 107 KFVKKAKSLGICALIVPEL---------------SFEESDDLIKECERY----NIALITLVSVTTP---------KERVK 158 (252)
T ss_dssp HHHHHHHHTTEEEEECTTC---------------CGGGCHHHHHHHHHT----TCEECEEEETTSC---------HHHHH
T ss_pred HHHHHHHHcCCCEEEeCCC---------------CHHHHHHHHHHHHHc----CCeEEEEeCCCCc---------HHHHH
Confidence 7789999999999999773 345533333333322 4343 44544332 25888
Q ss_pred HhHhcCCcEEEecCC------CC--H----HHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhc--CCCEEeccchH
Q 012478 248 AFADAGADVLFIDAL------AS--K----EEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEEL--GFKLVAYPLSL 313 (462)
Q Consensus 248 Ay~eAGAD~Ifie~~------~s--~----eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~l--Gv~~V~yp~~l 313 (462)
...+.+-..||..+. .+ . +.++++.+.. .+|+.+ .+ |- -+.++.+++ +..-|+.|+.+
T Consensus 159 ~ia~~a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~-~~Pv~v---Gf-GI---st~e~a~~~~~~ADGVIVGSAi 230 (252)
T 3tha_A 159 KLVKHAKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFT-NLPIFV---GF-GI---QNNQDVKRMRKVADGVIVGTSI 230 (252)
T ss_dssp HHHTTCCSCEEEECCSCSSSCSHHHHHHHHHHHHHHHTTC-CSCEEE---ES-SC---CSHHHHHHHTTTSSEEEECHHH
T ss_pred HHHHhCCCeEEEEecCCCCCcccCCCHHHHHHHHHHHHhc-CCcEEE---Ec-Cc---CCHHHHHHHHhcCCEEEECHHH
Confidence 888887777776542 11 1 2233333333 356543 33 32 144554433 48999999876
Q ss_pred HHH
Q 012478 314 IGV 316 (462)
Q Consensus 314 l~a 316 (462)
...
T Consensus 231 Vk~ 233 (252)
T 3tha_A 231 VKC 233 (252)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 450
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=84.23 E-value=6 Score=39.53 Aligned_cols=124 Identities=15% Similarity=0.217 Sum_probs=78.3
Q ss_pred CCCCHHH-HHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhccc
Q 012478 160 GYGNAMN-VKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS 238 (462)
Q Consensus 160 GyG~~~n-v~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~g 238 (462)
+.|++.. +.+..+.+.+.|...+||- .|+. +.++-+++|+|++++. |+++.+ +.|+.....
T Consensus 139 ~~~~~~~~~~~~~~~~~~~G~~~~KiK-------vg~~------~~~~d~~~v~avR~~~---g~~~~l--~vDan~~~~ 200 (370)
T 1chr_A 139 ASGDTKRDLDSAVEMIERRRHNRFKVK-------LGFR------SPQDDLIHMEALSNSL---GSKAYL--RVDVNQAWD 200 (370)
T ss_dssp CSSSHHHHHHHHHHHHHTTCCCEEEEE-------CSSS------CSHHHHHHHHHHHHHS---STTCCE--EEECTTCCC
T ss_pred cCCCcHHHHHHHHHHHHHCCCCEEEEe-------cCCC------CHHHHHHHHHHHHHhc---CCCCEE--EEECCCCCC
Confidence 3455543 4444444445899999982 2321 2355678888888774 455544 337777778
Q ss_pred HHHHHHHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHH---HHhcC-CCEEeccc
Q 012478 239 LEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELG-FKLVAYPL 311 (462)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~e---L~~lG-v~~V~yp~ 311 (462)
.++|++-++++.+.| ..|+|-+ .+.+.++++.+..+ +|+..+ .. ..+..+ +-+.| ++.|..-.
T Consensus 201 ~~~a~~~~~~l~~~~--i~~iEqP~~~~~~~~~~~l~~~~~-iPia~d-----E~--~~~~~~~~~~~~~~~~d~v~~k~ 270 (370)
T 1chr_A 201 EQVASVYIPELEALG--VELIEQPVGRENTQALRRLSDNNR-VAIMAD-----ES--LSTLASAFDLARDRSVDVFSLKL 270 (370)
T ss_dssp TTHHHHHTHHHHTTT--EEEEECCSCTTCHHHHHHHHHHSC-SEEEES-----SS--CCSHHHHHHHHTTTSCSEEEECT
T ss_pred HHHHHHHHHHHHhcC--CCEEECCCCcccHHHHHHHHhhCC-CCEEeC-----CC--cCCHHHHHHHHHcCCCCEEEECc
Confidence 899999999999976 5577754 34567888888875 676543 11 234544 44445 66666543
No 451
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=84.17 E-value=7.2 Score=40.21 Aligned_cols=180 Identities=10% Similarity=0.031 Sum_probs=93.7
Q ss_pred HHHHHHHHhCCcEEEecc---HHHHhhh----ccCCCCCCCCH-H----HHHHHHHHHHhhc------CCcEEEeCCC--
Q 012478 100 LSAKLVEKSGFSFCFTSG---FSISAAR----LALPDTGFISY-G----EMVDQGQLITQAV------SIPVIGDGDN-- 159 (462)
Q Consensus 100 lSArl~e~aGfdaI~vSG---~avSas~----lG~PD~g~vsl-~----Eml~~~~~I~ra~------~iPVIaD~Dt-- 159 (462)
-.|+.+.++|||.|=+-+ +-+.-.. .=.-|.--=++ + -.++.+++|.+++ +.||.+=+--
T Consensus 174 ~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~~ 253 (419)
T 3l5a_A 174 DATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEE 253 (419)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSCE
T ss_pred HHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEeccccc
Confidence 457888999999998863 3332111 11223211122 2 2344455555544 5677764321
Q ss_pred ------CCCCHHHHHHHHHHHHH-hCccEEEeCCCCCCC--CCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEe
Q 012478 160 ------GYGNAMNVKRTVKGYIK-AGFAGIILEDQVSPK--GCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVAR 230 (462)
Q Consensus 160 ------GyG~~~nv~rtVk~l~~-AGaaGI~IEDq~~PK--rCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiAR 230 (462)
|+ +..+..+.++.+++ +|++.|+|-...... ...-..+.. . ..+++++|+.++.. ...++.+++
T Consensus 254 ~~~~~~G~-~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~-~-~~~~a~~Ik~~v~~----~iPVI~~Gg 326 (419)
T 3l5a_A 254 TRGSDLGY-TIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDH-F-GRPVNQIVYEHLAG----RIPLIASGG 326 (419)
T ss_dssp EETTEEEE-CHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTT-T-TSBHHHHHHHHHTT----SSCEEECSS
T ss_pred ccCCCCCC-CHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCcc-c-cHHHHHHHHHHcCC----CCeEEEECC
Confidence 33 35678888999999 999999997753200 000001110 0 11345555443310 124555555
Q ss_pred cchhhcccHHHHHHHHHHhHhcCCcEEEec--CCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEE
Q 012478 231 TDSRQALSLEESLRRSRAFADAGADVLFID--ALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLV 307 (462)
Q Consensus 231 TDA~~~~gldeAI~RakAy~eAGAD~Ifie--~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V 307 (462)
-.. .+.|..+.+. ||+|.+- .+.+++..+++.+.... .-.+.++.+++.++++--.
T Consensus 327 I~t---------~e~Ae~~L~~-aDlVaiGR~~IanPdlv~ki~~G~~~-----------~I~~ci~~~~~~~~~~~~~ 384 (419)
T 3l5a_A 327 INS---------PESALDALQH-ADMVGMSSPFVTEPDFVHKLAEQRPH-----------DINLEFSMADLEDLAIPHA 384 (419)
T ss_dssp CCS---------HHHHHHHGGG-CSEEEESTHHHHCTTHHHHHHTTCGG-----------GCCCCCCGGGTTTTTCCCC
T ss_pred CCC---------HHHHHHHHHh-CCcHHHHHHHHHCcHHHHHHHcCCcc-----------cceecCCHHHHHHcCCCHH
Confidence 221 1234445555 9999873 24566677777654321 0123467777877775433
No 452
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=84.15 E-value=15 Score=37.31 Aligned_cols=137 Identities=15% Similarity=0.108 Sum_probs=92.5
Q ss_pred HHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhh-------hccCC---CCCCCCHHHHHHHHHHHHh
Q 012478 78 AKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAA-------RLALP---DTGFISYGEMVDQGQLITQ 147 (462)
Q Consensus 78 a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas-------~lG~P---D~g~vsl~Eml~~~~~I~r 147 (462)
-+.|.+.-++-+..++-.+||.-++.++++.|.+++-++|.-+.+. ..|.| .+|.-|++|+...++.|..
T Consensus 93 ~~~L~~~~~~~Gi~~~st~~d~~svd~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkPviLstGmat~~Ei~~Ave~i~~ 172 (349)
T 2wqp_A 93 EIKLKEYVESKGMIFISTLFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMNSIESIKKSVEIIRE 172 (349)
T ss_dssp HHHHHHHHHHTTCEEEEEECSHHHHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCeEEEeeCCHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHH
Confidence 3456666667788999999999999999999999999998765432 34776 4577899999888777643
Q ss_pred -------------------------------hc-CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCC-C
Q 012478 148 -------------------------------AV-SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGC-G 194 (462)
Q Consensus 148 -------------------------------a~-~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrC-G 194 (462)
.+ ++|| +|-|+.-|.+.. ...+.+||. .||=-..|.+- +
T Consensus 173 ~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpV-g~sdHt~G~~~~-----~AAvAlGA~--iIEkH~tld~a~~ 244 (349)
T 2wqp_A 173 AGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAII-GLSDHTLDNYAC-----LGAVALGGS--ILERHFTDRMDRP 244 (349)
T ss_dssp HTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEE-EEECCSSSSHHH-----HHHHHHTCC--EEEEEBCSCTTCC
T ss_pred cCCCEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCE-EeCCCCCcHHHH-----HHHHHhCCC--EEEeCCCccccCC
Confidence 24 5776 577777664322 233457888 56654333221 1
Q ss_pred CCCCCcccCHHHHHHHHHHHHHHHHhhC
Q 012478 195 HTRGRKVVSREEAVMRIKAAVDARKESG 222 (462)
Q Consensus 195 H~~gk~Lvp~ee~~~kI~AA~~Ar~~~g 222 (462)
-.+++.-+.++|+.+-++.++.....+|
T Consensus 245 G~D~~~SL~p~ef~~lv~~ir~~~~alG 272 (349)
T 2wqp_A 245 GPDIVCSMNPDTFKELKQGAHALKLARG 272 (349)
T ss_dssp STTGGGCBCHHHHHHHHHHHHHHHHHSS
T ss_pred CCChhhhCCHHHHHHHHHHHHHHHHHhC
Confidence 1244555667777777777666665555
No 453
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=84.14 E-value=13 Score=37.07 Aligned_cols=135 Identities=11% Similarity=0.046 Sum_probs=78.6
Q ss_pred HHHHHHHhCCcEEEeccHHHHhhhccC-CCCCCCCHHHHHHHHHHHHhhc-----CCcEEEeCCCCC-CCHHHHHHHHHH
Q 012478 101 SAKLVEKSGFSFCFTSGFSISAARLAL-PDTGFISYGEMVDQGQLITQAV-----SIPVIGDGDNGY-GNAMNVKRTVKG 173 (462)
Q Consensus 101 SArl~e~aGfdaI~vSG~avSas~lG~-PD~g~vsl~Eml~~~~~I~ra~-----~iPVIaD~DtGy-G~~~nv~rtVk~ 173 (462)
+++.++++|+.+|-+=+-.. --..|+ +...+++.+|++..++..+.+. +.-|++=.|.=. .+...+.+-.+.
T Consensus 108 ~v~~l~~aGaagv~iEDq~~-~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~a 186 (307)
T 3lye_A 108 TVEHYIRSGVAGAHLEDQIL-TKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSLGYEECIERLRA 186 (307)
T ss_dssp HHHHHHHTTCCEEEECCBCC-CC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHCHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEEcCCCC-CcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhccCHHHHHHHHHH
Confidence 45677889999998875221 112343 3446899999999988876542 466777766621 134456666789
Q ss_pred HHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcC
Q 012478 174 YIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAG 253 (462)
Q Consensus 174 l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAG 253 (462)
|.+|||++|.+|.-. +.+ .+.+|.+++. +.+++++--..... ..+ -...+.++|
T Consensus 187 y~eAGAD~ifi~~~~--------------~~~-~~~~i~~~~~-----~~Pv~~n~~~~g~~-p~~-----t~~eL~~lG 240 (307)
T 3lye_A 187 ARDEGADVGLLEGFR--------------SKE-QAAAAVAALA-----PWPLLLNSVENGHS-PLI-----TVEEAKAMG 240 (307)
T ss_dssp HHHTTCSEEEECCCS--------------CHH-HHHHHHHHHT-----TSCBEEEEETTSSS-CCC-----CHHHHHHHT
T ss_pred HHHCCCCEEEecCCC--------------CHH-HHHHHHHHcc-----CCceeEEeecCCCC-CCC-----CHHHHHHcC
Confidence 999999999998531 233 3444443332 13555543211100 011 145677899
Q ss_pred CcEEEecCC
Q 012478 254 ADVLFIDAL 262 (462)
Q Consensus 254 AD~Ifie~~ 262 (462)
...|..+..
T Consensus 241 v~~v~~~~~ 249 (307)
T 3lye_A 241 FRIMIFSFA 249 (307)
T ss_dssp CSEEEEETT
T ss_pred CeEEEEChH
Confidence 998876553
No 454
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=84.12 E-value=1.8 Score=40.51 Aligned_cols=70 Identities=16% Similarity=0.177 Sum_probs=49.8
Q ss_pred HHHHHHHHhHhcCCcEEEecCC--------CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccch
Q 012478 241 ESLRRSRAFADAGADVLFIDAL--------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLS 312 (462)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~~--------~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ 312 (462)
+.++-++.|.++|||.|.+..+ ...+.++++++.+. +|+.+| +|-...-..+++.+.|+..|+++..
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~~~-ipvi~~----Ggi~~~~~~~~~l~~Gad~V~ig~~ 110 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTT-LPIIAS----GGAGKMEHFLEAFLRGADKVSINTA 110 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGGCC-SCEEEE----SCCCSHHHHHHHHHTTCSEECCSHH
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHhCC-CCEEEe----CCCCCHHHHHHHHHcCCCeeehhhH
Confidence 4577899999999999987533 24578888988875 677654 2322112356677889999999987
Q ss_pred HHH
Q 012478 313 LIG 315 (462)
Q Consensus 313 ll~ 315 (462)
++.
T Consensus 111 ~l~ 113 (247)
T 3tdn_A 111 AVE 113 (247)
T ss_dssp HHH
T ss_pred Hhh
Confidence 763
No 455
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=84.12 E-value=27 Score=32.53 Aligned_cols=181 Identities=9% Similarity=0.013 Sum_probs=96.8
Q ss_pred eEecccCChHHH-HHHHHhC--CcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhc-CCcEEEeCCCCCCCHHH
Q 012478 91 HQGPACFDALSA-KLVEKSG--FSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV-SIPVIGDGDNGYGNAMN 166 (462)
Q Consensus 91 iv~p~ayDalSA-rl~e~aG--fdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~-~iPVIaD~DtGyG~~~n 166 (462)
+++.-.-|.-.| +++++.| .+.+=++ ..+-. ..|. ..++.|.+.. +.+|+.|.=.. -.+..
T Consensus 9 ivAlD~~~~~~a~~~~~~~~~~~~~ikvg-~~lf~-~~G~------------~~v~~l~~~~p~~~iflDlKl~-Dip~t 73 (221)
T 3exr_A 9 QVALDHSNLKGAITAAVSVGNEVDVIEAG-TVCLL-QVGS------------ELVEVLRSLFPDKIIVADTKCA-DAGGT 73 (221)
T ss_dssp EEEECCSSHHHHHHHHHHHGGGCSEEEEC-HHHHH-HHCT------------HHHHHHHHHCTTSEEEEEEEEC-SCHHH
T ss_pred EEEeCCCCHHHHHHHHHhhCCCceEEEEC-HHHHH-hcCH------------HHHHHHHHhCCCCcEEEEEEee-ccHHH
Confidence 444455555445 5667776 5555554 33321 2353 2245555544 67899998875 23444
Q ss_pred HHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHH
Q 012478 167 VKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRS 246 (462)
Q Consensus 167 v~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~Ra 246 (462)
+.+. +.++||+.+.+-... | .+ -+++++++.++.|....+++=|= ....+ .+++
T Consensus 74 ~~~~---~~~~Gad~vtVH~~~---------g------~~---~l~~a~~~~~~~g~~~~~~~Vt~-lts~~----~~~~ 127 (221)
T 3exr_A 74 VAKN---NAVRGADWMTCICSA---------T------IP---TMKAARKAIEDINPDKGEIQVEL-YGDWT----YDQA 127 (221)
T ss_dssp HHHH---HHTTTCSEEEEETTS---------C------HH---HHHHHHHHHHHHCTTTCEEEEEC-CSSCC----HHHH
T ss_pred HHHH---HHHcCCCEEEEeccC---------C------HH---HHHHHHHHHHhcCCCcceEEEEE-cCCCC----HHHH
Confidence 4433 678999997762221 1 12 24455555444342222222221 11112 2345
Q ss_pred HHhHhcCCcEEEec--------C-CCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012478 247 RAFADAGADVLFID--------A-LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316 (462)
Q Consensus 247 kAy~eAGAD~Ifie--------~-~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~a 316 (462)
+.+.+.|+|-++++ + +.+.++++.+.+... ...++- +. ||-.|. +..++.+.|.+.++.|...+.+
T Consensus 128 ~~~~~~~~~~~v~~~a~~~~~~Gvv~s~~e~~~ir~~~~-~~~~i~-v~-gGI~~~-~~~~~~~aGad~~VvG~~I~~a 202 (221)
T 3exr_A 128 QQWLDAGISQAIYHQSRDALLAGETWGEKDLNKVKKLIE-MGFRVS-VT-GGLSVD-TLKLFEGVDVFTFIAGRGITEA 202 (221)
T ss_dssp HHHHHTTCCEEEEECCHHHHHHTCCCCHHHHHHHHHHHH-HTCEEE-EE-SSCCGG-GGGGGTTCCCSEEEECHHHHTS
T ss_pred HHHHcCCHHHHHHHHHHhcCCCccccCHHHHHHHHHhhc-CCceEE-EE-CCCCHH-HHHHHHHCCCCEEEECchhhCC
Confidence 56677888776653 2 245667777765432 111111 22 354443 5678999999999999876653
No 456
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=84.10 E-value=12 Score=37.34 Aligned_cols=95 Identities=17% Similarity=0.236 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHH
Q 012478 165 MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLR 244 (462)
Q Consensus 165 ~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~ 244 (462)
.+..+.++.+.+.|...+++-- |+ +.++-+++|++++++. |+++.| |.|+-....+++|++
T Consensus 146 ~~~~~~~~~~~~~Gf~~~K~k~-------g~-------~~~~di~~v~avr~~~---g~~~~l--~vDaN~~~~~~~A~~ 206 (378)
T 4hpn_A 146 SDNASEMAERRAEGFHACKIKI-------GF-------GVEEDLRVIAAVREAI---GPDMRL--MIDANHGYTVTEAIT 206 (378)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEC-------CS-------CHHHHHHHHHHHHHHH---TTTSEE--EEECTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHhccceecccc-------cC-------ChHHHHHHHHHHHHhc---CCcEEE--EEecCcccCHHHHHH
Confidence 4455555666678999999833 21 3567788998888775 566654 458888889999999
Q ss_pred HHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCcee
Q 012478 245 RSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKM 281 (462)
Q Consensus 245 RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~ 281 (462)
.++++.+.| ..|+|-+ .+.+.++++.+..+ +|+.
T Consensus 207 ~~~~l~~~~--i~~iEeP~~~~d~~~~~~l~~~~~-ipIa 243 (378)
T 4hpn_A 207 LGDRAAGFG--IDWFEEPVVPEQLDAYARVRAGQP-IPVA 243 (378)
T ss_dssp HHHHHGGGC--CSCEECCSCTTCHHHHHHHHHHSS-SCEE
T ss_pred HHhhhhhcc--cchhhcCCCccchhhhHHHHhhCC-ceee
Confidence 999999886 4477765 46788899998876 5754
No 457
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=84.10 E-value=1.8 Score=42.79 Aligned_cols=84 Identities=18% Similarity=0.224 Sum_probs=61.8
Q ss_pred HHHHHHhCccEEEeCC-CCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHh
Q 012478 171 VKGYIKAGFAGIILED-QVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAF 249 (462)
Q Consensus 171 Vk~l~~AGaaGI~IED-q~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy 249 (462)
.+.++++|+.+|-+-| +..-- .|+.+. .+++.+|++..+++++.+.. .-|++=-|.--. +.+++.+-++.|
T Consensus 28 A~~~~~aG~~ai~vs~~~~a~~-~G~pD~-~~vt~~em~~~~~~I~~~~~-----~PviaD~d~Gyg-~~~~~~~~v~~l 99 (290)
T 2hjp_A 28 AKLAEQAGFGGIWGSGFELSAS-YAVPDA-NILSMSTHLEMMRAIASTVS-----IPLIADIDTGFG-NAVNVHYVVPQY 99 (290)
T ss_dssp HHHHHHHTCSEEEECHHHHHHH-TTSCTT-TCSCHHHHHHHHHHHHTTCS-----SCEEEECTTTTS-SHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEChHHHHHh-CCCCCC-CCCCHHHHHHHHHHHHhcCC-----CCEEEECCCCCC-CHHHHHHHHHHH
Confidence 4567789999999987 33211 566552 47899999999999887753 225555444322 567889999999
Q ss_pred HhcCCcEEEecCC
Q 012478 250 ADAGADVLFIDAL 262 (462)
Q Consensus 250 ~eAGAD~Ifie~~ 262 (462)
.++||.+|-+|.-
T Consensus 100 ~~aGa~gv~iED~ 112 (290)
T 2hjp_A 100 EAAGASAIVMEDK 112 (290)
T ss_dssp HHHTCSEEEEECB
T ss_pred HHhCCeEEEEcCC
Confidence 9999999999863
No 458
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=84.02 E-value=11 Score=38.25 Aligned_cols=170 Identities=20% Similarity=0.197 Sum_probs=104.6
Q ss_pred EecccC----ChHHHHH--HHHhCCcEEEeccHHHHhhhccCCCC-CCCCHH---HHHHHHHHHHhhc-CCcEEEeC---
Q 012478 92 QGPACF----DALSAKL--VEKSGFSFCFTSGFSISAARLALPDT-GFISYG---EMVDQGQLITQAV-SIPVIGDG--- 157 (462)
Q Consensus 92 v~p~ay----DalSArl--~e~aGfdaI~vSG~avSas~lG~PD~-g~vsl~---Eml~~~~~I~ra~-~iPVIaD~--- 157 (462)
.|||+| |-+-..+ +.++|..++.+=|.--. ...|. +.-.++ =+...++.|.+.+ ++-||.|.
T Consensus 63 SMPGv~r~sid~l~~~~~~~~~lGi~av~LFgv~~p----~~KD~~gs~A~~~~g~v~rAir~iK~~~P~l~VitDVcLc 138 (356)
T 3obk_A 63 SMPGQSRLSMEDLLKEVGEARSYGIKAFMLFPKVDD----ELKSVMAEESYNPDGLLPRAIMALKEAFPDVLLLADVALD 138 (356)
T ss_dssp TSTTCEEECHHHHHHHHHHHHHTTCCEEEEEEECCG----GGCBSSCGGGGCTTSHHHHHHHHHHHHSTTCEEEEEECSG
T ss_pred CCCCceEECHHHHHHHHHHHHHCCCCEEEEecCCCc----ccCCcccccccCCCChHHHHHHHHHHHCCCCEEEEeeccc
Confidence 468887 4443322 44579999887653100 12232 222222 2445667777766 47788884
Q ss_pred ---CCCC----------C-CHHHHHHH---HHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHh
Q 012478 158 ---DNGY----------G-NAMNVKRT---VKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKE 220 (462)
Q Consensus 158 ---DtGy----------G-~~~nv~rt---Vk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~ 220 (462)
++|+ = |...+... .-...+|||+-|-=-|- |+| ||.|++++.++
T Consensus 139 ~YT~HGHcGil~~~~g~V~ND~Tl~~Lak~Als~A~AGADiVAPSdM--------MDG-----------rV~aIR~aLd~ 199 (356)
T 3obk_A 139 PYSSMGHDGVVDEQSGKIVNDLTVHQLCKQAITLARAGADMVCPSDM--------MDG-----------RVSAIRESLDM 199 (356)
T ss_dssp GGBTTCCSSCBCTTTCCBCHHHHHHHHHHHHHHHHHHTCSEEEECSC--------CTT-----------HHHHHHHHHHH
T ss_pred cccCCCcceeeeCCCCCCCCHHHHHHHHHHHHHHHHcCCCeEecccc--------ccC-----------HHHHHHHHHHH
Confidence 3332 1 22333333 34455899998877664 443 66666666655
Q ss_pred hC-CCeEEEEecchhh-------------c--------------ccHHHHHHHHHHhHhcCCcEEEe-cCCCCHHHHHHH
Q 012478 221 SG-SDIVIVARTDSRQ-------------A--------------LSLEESLRRSRAFADAGADVLFI-DALASKEEMKAF 271 (462)
Q Consensus 221 ~g-~d~vIiARTDA~~-------------~--------------~gldeAI~RakAy~eAGAD~Ifi-e~~~s~eei~~i 271 (462)
.| .+.-|++-+--++ + ..-+||++.+..=.+-|||+|+| ++++-.+.++++
T Consensus 200 ~G~~~v~IMsYsaKyASafYGPFRdAa~Sa~p~~GDRktYQmdpaN~~EAlrE~~lDi~EGAD~vMVKPal~YLDIi~~v 279 (356)
T 3obk_A 200 EGCTDTSILAYSCKYASSFYGPFRDALDSHMVGGTDKKTYQMDPSNSREAEREAEADASEGADMLMVKPGLPYLDVLAKI 279 (356)
T ss_dssp TTCTTSEEEEEEEEBCCSTTHHHHHHHTCCCSTTCCSTTTSBCTTCSHHHHHHHHHHHHTTCSEEEEESSGGGHHHHHHH
T ss_pred CCCCCcceehhHHHHhhhccchhhHHhcCCCCCCCCccccCCCCCCHHHHHHHHHhhHhcCCCEEEecCCCcHHHHHHHH
Confidence 44 3677777653221 1 12489999999999999999999 889999999999
Q ss_pred HHhCCCCceeeeee
Q 012478 272 CEISPLVPKMANML 285 (462)
Q Consensus 272 ~~~v~~vP~~~N~l 285 (462)
.+.+. +|+.+=.+
T Consensus 280 k~~~~-~PvaaYqV 292 (356)
T 3obk_A 280 REKSK-LPMVAYHV 292 (356)
T ss_dssp HHHCS-SCEEEEEC
T ss_pred HhcCC-CCEEEEEc
Confidence 98875 77654333
No 459
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=83.85 E-value=16 Score=34.42 Aligned_cols=165 Identities=12% Similarity=0.101 Sum_probs=90.0
Q ss_pred HHHHHhCCcEEEec-cHHHHhhhccCCCCCCCCHHHHHHHHHHHHhh--cCCcEEEeCCCCCCCHHHHHHHHHHHHHhCc
Q 012478 103 KLVEKSGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQA--VSIPVIGDGDNGYGNAMNVKRTVKGYIKAGF 179 (462)
Q Consensus 103 rl~e~aGfdaI~vS-G~avSas~lG~PD~g~vsl~Eml~~~~~I~ra--~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGa 179 (462)
+.++++|.|.+.+= .=+ +=.|.. ++. ...++.|.+. .++|+-+++= .-++. +.++.+.++||
T Consensus 24 ~~l~~~g~d~~h~DVmDg-----~Fvpn~---~~G--~~~v~~ir~~~~~~~~~dvhLm--v~~p~---~~i~~~~~aGa 88 (228)
T 3ovp_A 24 LRMLDSGADYLHLDVMDG-----HFVPNI---TFG--HPVVESLRKQLGQDPFFDMHMM--VSKPE---QWVKPMAVAGA 88 (228)
T ss_dssp HHHHHTTCSCEEEEEEBS-----SSSSCB---CBC--HHHHHHHHHHHCSSSCEEEEEE--CSCGG---GGHHHHHHHTC
T ss_pred HHHHHcCCCEEEEEecCC-----CcCccc---ccC--HHHHHHHHHhhCCCCcEEEEEE--eCCHH---HHHHHHHHcCC
Confidence 45677888877763 100 002332 222 1245556555 4678755543 34443 45678889999
Q ss_pred cEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEe
Q 012478 180 AGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFI 259 (462)
Q Consensus 180 aGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifi 259 (462)
+.|++-... |-| ..+. ++++++. |....|.-.+.. . +++.+.|.+ .+|.|++
T Consensus 89 d~itvH~Ea----~~~--------~~~~---i~~i~~~----G~k~gval~p~t----~----~e~l~~~l~-~~D~Vl~ 140 (228)
T 3ovp_A 89 NQYTFHLEA----TEN--------PGAL---IKDIREN----GMKVGLAIKPGT----S----VEYLAPWAN-QIDMALV 140 (228)
T ss_dssp SEEEEEGGG----CSC--------HHHH---HHHHHHT----TCEEEEEECTTS----C----GGGTGGGGG-GCSEEEE
T ss_pred CEEEEccCC----chh--------HHHH---HHHHHHc----CCCEEEEEcCCC----C----HHHHHHHhc-cCCeEEE
Confidence 999984332 111 2233 3333333 322333222211 1 223444544 3898876
Q ss_pred cCC-----------CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012478 260 DAL-----------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 260 e~~-----------~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
-++ ...+.++++.+..+..|+ .+. ||-+| -+..++.+.|++.++.|...+.
T Consensus 141 msv~pGf~Gq~f~~~~l~ki~~lr~~~~~~~I---~Vd-GGI~~-~t~~~~~~aGAd~~VvGsaIf~ 202 (228)
T 3ovp_A 141 MTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDI---EVD-GGVGP-DTVHKCAEAGANMIVSGSAIMR 202 (228)
T ss_dssp ESSCTTTCSCCCCGGGHHHHHHHHHHCTTCEE---EEE-SSCST-TTHHHHHHHTCCEEEESHHHHT
T ss_pred eeecCCCCCcccCHHHHHHHHHHHHhcCCCCE---EEe-CCcCH-HHHHHHHHcCCCEEEEeHHHhC
Confidence 432 234567777776543332 223 46554 5889999999999999987765
No 460
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=83.82 E-value=2.1 Score=43.60 Aligned_cols=97 Identities=19% Similarity=0.074 Sum_probs=58.4
Q ss_pred HHHHHHHHhC-CCceEeccc---CChHHHHHHHHhCCcEEEeccHHH-Hhh-----h------------ccCCCCCCCCH
Q 012478 78 AKSLRQILEL-PGVHQGPAC---FDALSAKLVEKSGFSFCFTSGFSI-SAA-----R------------LALPDTGFISY 135 (462)
Q Consensus 78 a~~LR~ll~~-~~~iv~p~a---yDalSArl~e~aGfdaI~vSG~av-Sas-----~------------lG~PD~g~vsl 135 (462)
.+.++++.+. +-++++-++ .+.-.|+.++++|+|+|-++|.+= +.+ . .+..|.+.-+.
T Consensus 176 ~~~i~~i~~~~~vPVivK~vG~g~s~~~A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~ 255 (368)
T 3vkj_A 176 LEKLRDISKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTA 255 (368)
T ss_dssp HHHHHHHHTTCSSCEEEECSSSCCCHHHHHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHH
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhccccccccccHH
Confidence 4456665554 456777555 788899999999999999974221 000 0 12233332222
Q ss_pred HHHHHHHHHHHhhc-CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012478 136 GEMVDQGQLITQAV-SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 136 ~Eml~~~~~I~ra~-~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~I 184 (462)
+. +..+++.. ++|||+|.. ..+..++. +...+||++|.+
T Consensus 256 -~~---l~~v~~~~~~ipvia~GG--I~~~~d~~----kal~lGA~~v~i 295 (368)
T 3vkj_A 256 -AS---IMEVRYSVPDSFLVGSGG--IRSGLDAA----KAIALGADIAGM 295 (368)
T ss_dssp -HH---HHHHHHHSTTCEEEEESS--CCSHHHHH----HHHHHTCSEEEE
T ss_pred -HH---HHHHHHHcCCCcEEEECC--CCCHHHHH----HHHHcCCCEEEE
Confidence 22 23444555 499999953 34555555 333479999998
No 461
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=83.81 E-value=3.6 Score=40.56 Aligned_cols=89 Identities=20% Similarity=0.254 Sum_probs=57.6
Q ss_pred HHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCC
Q 012478 81 LRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNG 160 (462)
Q Consensus 81 LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtG 160 (462)
++.+.+. +..+++.+...-.|+.++++|.|+|.+.|.. + -|+.. ...++ ..++.|.+.+++|||++. |
T Consensus 103 i~~l~~~-g~~v~~~v~~~~~a~~~~~~GaD~i~v~g~~-~---GG~~g-~~~~~----~ll~~i~~~~~iPViaaG--G 170 (332)
T 2z6i_A 103 MERFHEA-GIIVIPVVPSVALAKRMEKIGADAVIAEGME-A---GGHIG-KLTTM----TLVRQVATAISIPVIAAG--G 170 (332)
T ss_dssp HHHHHHT-TCEEEEEESSHHHHHHHHHTTCSCEEEECTT-S---SEECC-SSCHH----HHHHHHHHHCSSCEEEES--S
T ss_pred HHHHHHc-CCeEEEEeCCHHHHHHHHHcCCCEEEEECCC-C---CCCCC-CccHH----HHHHHHHHhcCCCEEEEC--C
Confidence 3333333 4555566777778899999999999997642 1 13321 11222 445666777899999984 4
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeC
Q 012478 161 YGNAMNVKRTVKGYIKAGFAGIILE 185 (462)
Q Consensus 161 yG~~~nv~rtVk~l~~AGaaGI~IE 185 (462)
..++.++. .+.++||+||.+=
T Consensus 171 I~~~~~~~----~al~~GAdgV~vG 191 (332)
T 2z6i_A 171 IADGEGAA----AGFMLGAEAVQVG 191 (332)
T ss_dssp CCSHHHHH----HHHHTTCSEEEEC
T ss_pred CCCHHHHH----HHHHcCCCEEEec
Confidence 45665555 4445899999983
No 462
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=83.78 E-value=3.2 Score=41.38 Aligned_cols=128 Identities=15% Similarity=0.122 Sum_probs=82.2
Q ss_pred HHHHHHHhCccEEEeCC-CCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHH
Q 012478 170 TVKGYIKAGFAGIILED-QVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRA 248 (462)
Q Consensus 170 tVk~l~~AGaaGI~IED-q~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakA 248 (462)
+.+.++++|+.+|-+-| +..- ..|+.+ ..+++.+|++..+++++++.. ..|++=-|.-. .+.+.+.+-++.
T Consensus 41 sA~l~e~aG~dai~vs~~s~a~-~~G~pD-~~~vt~~em~~~~~~I~r~~~-----~pviaD~d~Gy-g~~~~v~~~v~~ 112 (305)
T 3ih1_A 41 AALVARNTGFLALYLSGAAYTA-SKGLPD-LGIVTSTEVAERARDLVRATD-----LPVLVDIDTGF-GGVLNVARTAVE 112 (305)
T ss_dssp HHHHHHHTTCSCEEECHHHHHH-HHTCCS-SSCSCHHHHHHHHHHHHHHHC-----CCEEEECTTCS-SSHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECcHHHHH-hCCCCC-CCcCCHHHHHHHHHHHHHhcC-----CCEEEECCCCC-CCHHHHHHHHHH
Confidence 34567789999999988 3321 236544 247899999999999987752 34555544421 235667777899
Q ss_pred hHhcCCcEEEecCCC--------------CH-H---HHHHHHHhCCCCceeeeeeecCCCCCCC----------CHHHHH
Q 012478 249 FADAGADVLFIDALA--------------SK-E---EMKAFCEISPLVPKMANMLEGGGKTPIL----------NPLELE 300 (462)
Q Consensus 249 y~eAGAD~Ifie~~~--------------s~-e---ei~~i~~~v~~vP~~~N~l~~~g~tP~l----------s~~eL~ 300 (462)
|.++||.+|-+|.-. +. + .++++++. +.+.++|.- |..+ -...+.
T Consensus 113 l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A--~~~~~I~AR-----tda~~~~g~~~ai~Ra~ay~ 185 (305)
T 3ih1_A 113 MVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV--APSLYIVAR-----TDARGVEGLDEAIERANAYV 185 (305)
T ss_dssp HHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH--CTTSEEEEE-----ECCHHHHCHHHHHHHHHHHH
T ss_pred HHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc--CCCeEEEEe-----eccccccCHHHHHHHHHHHH
Confidence 999999999999632 22 2 33334444 345666633 3221 124478
Q ss_pred hcCCCEEeccch
Q 012478 301 ELGFKLVAYPLS 312 (462)
Q Consensus 301 ~lGv~~V~yp~~ 312 (462)
++|...|..+..
T Consensus 186 eAGAD~i~~e~~ 197 (305)
T 3ih1_A 186 KAGADAIFPEAL 197 (305)
T ss_dssp HHTCSEEEETTC
T ss_pred HcCCCEEEEcCC
Confidence 889988877553
No 463
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=83.77 E-value=1.8 Score=39.48 Aligned_cols=94 Identities=19% Similarity=0.216 Sum_probs=55.8
Q ss_pred HHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCC-CCCCCHHHHHHHHHHHHhhcC-CcEEE
Q 012478 78 AKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPD-TGFISYGEMVDQGQLITQAVS-IPVIG 155 (462)
Q Consensus 78 a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD-~g~vsl~Eml~~~~~I~ra~~-iPVIa 155 (462)
...+++.+.. .++...+++...++.+.+.|+|.+.+|..--+ ...++ .....+ +..+.+++..+ +||++
T Consensus 107 ~~~~~~~~g~--~~~~~s~~t~~e~~~a~~~g~d~v~~~~v~~t---~~~~~~~~~~~~----~~l~~~~~~~~~~pvia 177 (227)
T 2tps_A 107 AKEVRAAIGD--MILGVSAHTMSEVKQAEEDGADYVGLGPIYPT---ETKKDTRAVQGV----SLIEAVRRQGISIPIVG 177 (227)
T ss_dssp HHHHHHHHTT--SEEEEEECSHHHHHHHHHHTCSEEEECCSSCC---CSSSSCCCCCTT----HHHHHHHHTTCCCCEEE
T ss_pred HHHHHHhcCC--cEEEEecCCHHHHHHHHhCCCCEEEECCCcCC---CCCCCCCCccCH----HHHHHHHHhCCCCCEEE
Confidence 3445554432 44444568888888888999999998642211 11222 122333 33455666666 99999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHhCccEEEeCCC
Q 012478 156 DGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQ 187 (462)
Q Consensus 156 D~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq 187 (462)
+. |- ++.|+ +++.++|++||.+=-.
T Consensus 178 ~G--GI-~~~nv----~~~~~~Ga~gv~vgs~ 202 (227)
T 2tps_A 178 IG--GI-TIDNA----APVIQAGADGVSMISA 202 (227)
T ss_dssp ES--SC-CTTTS----HHHHHTTCSEEEESHH
T ss_pred Ec--CC-CHHHH----HHHHHcCCCEEEEhHH
Confidence 83 22 24444 4566789999998443
No 464
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=83.75 E-value=1.2 Score=42.93 Aligned_cols=68 Identities=19% Similarity=0.092 Sum_probs=51.7
Q ss_pred HHHHHHHHhHhcCCcEEEecCC--CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012478 241 ESLRRSRAFADAGADVLFIDAL--ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~~--~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
+.++-|++|.+.|||.+.+--+ .+.+.++++++.++ +|+. + ++|-+ ....++|- +|+.+|+++..++.
T Consensus 39 dp~~~A~~~~~~Ga~~l~vvDL~~~n~~~i~~i~~~~~-~pv~---v-gGGir-~~~~~~~l-~Ga~~Viigs~a~~ 108 (260)
T 2agk_A 39 PSSYYAKLYKDRDVQGCHVIKLGPNNDDAAREALQESP-QFLQ---V-GGGIN-DTNCLEWL-KWASKVIVTSWLFT 108 (260)
T ss_dssp CHHHHHHHHHHTTCTTCEEEEESSSCHHHHHHHHHHST-TTSE---E-ESSCC-TTTHHHHT-TTCSCEEECGGGBC
T ss_pred CHHHHHHHHHHcCCCEEEEEeCCCCCHHHHHHHHhcCC-ceEE---E-eCCCC-HHHHHHHh-cCCCEEEECcHHHh
Confidence 3577899999999998877433 47889999999876 4543 2 34544 34889999 99999999988664
No 465
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=83.72 E-value=3.7 Score=39.98 Aligned_cols=87 Identities=17% Similarity=0.110 Sum_probs=58.1
Q ss_pred HHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhc--CCcEEEeC
Q 012478 80 SLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV--SIPVIGDG 157 (462)
Q Consensus 80 ~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~--~iPVIaD~ 157 (462)
.|.+..++-+..++..++|.--+..+.++|++.|.+++.- + ++..++++ ..+.++..+ ++|||+
T Consensus 153 ~l~~~a~~lGl~~lvev~t~ee~~~A~~~Gad~IGv~~r~-----l---~~~~~dl~----~~~~l~~~v~~~~pvVa-- 218 (272)
T 3qja_A 153 SMLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVNARD-----L---MTLDVDRD----CFARIAPGLPSSVIRIA-- 218 (272)
T ss_dssp HHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEEESBC-----T---TTCCBCTT----HHHHHGGGSCTTSEEEE--
T ss_pred HHHHHHHHCCCcEEEEcCCHHHHHHHHHCCCCEEEECCCc-----c---cccccCHH----HHHHHHHhCcccCEEEE--
Confidence 3344444456777889999988888888999999887421 1 11112222 345566655 689998
Q ss_pred CCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012478 158 DNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 158 DtGyG~~~nv~rtVk~l~~AGaaGI~I 184 (462)
+.|..++.++ +.+.++|++|+-+
T Consensus 219 egGI~t~edv----~~l~~~GadgvlV 241 (272)
T 3qja_A 219 ESGVRGTADL----LAYAGAGADAVLV 241 (272)
T ss_dssp ESCCCSHHHH----HHHHHTTCSEEEE
T ss_pred ECCCCCHHHH----HHHHHcCCCEEEE
Confidence 6676666554 4777899999998
No 466
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=83.71 E-value=2.3 Score=43.04 Aligned_cols=85 Identities=19% Similarity=0.159 Sum_probs=51.2
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEE-EeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEE
Q 012478 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGI-ILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV 228 (462)
Q Consensus 150 ~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI-~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIi 228 (462)
.=-||.|.+. .+.++.++++||++| -|| ..|+-..+.+|-....--+++..|+ ++- ..+.+..
T Consensus 17 kgGvI~d~~~--------~e~A~~ae~aGA~aI~~l~--~v~~d~~~~~G~arm~~p~~i~~I~---~av---~iPV~~K 80 (330)
T 2yzr_A 17 KHGVVMDVTN--------VEQAQIAEEAGAVAVMALE--RVPADIRAAGGVARMSDPALIEEIM---DAV---SIPVMAK 80 (330)
T ss_dssp TTSEEEEESS--------HHHHHHHHHHTCSEEEECS--SCHHHHC--CCCCCCCCHHHHHHHH---HHC---SSCEEEE
T ss_pred cCCceeeCCH--------HHHHHHHHHcCCCEEEecC--CccccccCCcchhhcCCHHHHHHHH---Hhc---CCCeEEE
Confidence 3347778766 456788999999999 444 2233333344433333334555554 332 2456666
Q ss_pred EecchhhcccHHHHHHHHHHhHhcCCcEEEe
Q 012478 229 ARTDSRQALSLEESLRRSRAFADAGADVLFI 259 (462)
Q Consensus 229 ARTDA~~~~gldeAI~RakAy~eAGAD~Ifi 259 (462)
.|..- +..++.|+++|||+|-.
T Consensus 81 ~rig~---------~~e~qilea~GaD~Id~ 102 (330)
T 2yzr_A 81 CRIGH---------TTEALVLEAIGVDMIDE 102 (330)
T ss_dssp EETTC---------HHHHHHHHHTTCSEEEE
T ss_pred Eeecc---------hHHHHHHHHcCCCEEeh
Confidence 66643 34688888999999874
No 467
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=83.46 E-value=12 Score=40.06 Aligned_cols=107 Identities=15% Similarity=0.126 Sum_probs=67.7
Q ss_pred CHHHHHHHHHHHHHhC-----ccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhh-C---CCeEEEEecch
Q 012478 163 NAMNVKRTVKGYIKAG-----FAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKES-G---SDIVIVARTDS 233 (462)
Q Consensus 163 ~~~nv~rtVk~l~~AG-----aaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~-g---~d~vIiARTDA 233 (462)
+...+.+.++++++.| |+-|=|-.+. --.|-+-++.+|-++|+.-++++-++. . .+..|-- |.
T Consensus 247 ~~~~al~~a~~mv~~G~~~~~AdIIDIGgeS------TRPGa~~vs~eEEl~RvvpvI~~i~~~~~~~~~~vpISI--DT 318 (545)
T 2bmb_A 247 DIESQLNDIIKLCKDALYLHESVIIDVGGCS------TRPNSIQASEEEEIRRSIPLIKAIRESTELPQDKVILSI--DT 318 (545)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSCEEEEEECSC------CSTTCCCCCHHHHHHHHHHHHHHHHHCSSSCGGGEEEEE--EC
T ss_pred CHHHHHHHHHHHHHcCCCCCCceEEEECCCC------CCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEE--eC
Confidence 5677888889999999 9999886543 123445678888778877777665420 0 1333332 44
Q ss_pred hhcccHHHHHHHHHHhHhcCCcEEE-ecCCCCHHHHHHHHHhCCCCceeeee
Q 012478 234 RQALSLEESLRRSRAFADAGADVLF-IDALASKEEMKAFCEISPLVPKMANM 284 (462)
Q Consensus 234 ~~~~gldeAI~RakAy~eAGAD~If-ie~~~s~eei~~i~~~v~~vP~~~N~ 284 (462)
..+ + -|++..+||||+|= |.+....+++..+++..|++|..+.-
T Consensus 319 ~~a----~---VaeaAl~aGadIINDVsg~~~d~~m~~vva~~~~~~vVlmH 363 (545)
T 2bmb_A 319 YRS----N---VAKEAIKVGVDIINDISGGLFDSNMFAVIAENPEICYILSH 363 (545)
T ss_dssp CCH----H---HHHHHHHTTCCEEEETTTTSSCTTHHHHHHTCTTSEEEEEC
T ss_pred CcH----H---HHHHHHHcCCCEEEeCCCCcCChHHHHHHHHhCCCeEEEEC
Confidence 432 1 24555667999996 55543224677788877566765543
No 468
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=83.31 E-value=2.7 Score=42.35 Aligned_cols=87 Identities=24% Similarity=0.296 Sum_probs=53.8
Q ss_pred HHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCC
Q 012478 211 IKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGK 290 (462)
Q Consensus 211 I~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~ 290 (462)
|.+|+++.++..++..|..-+|. ++| ++...++|||.|.++.. +.++++++++.+.. ... +...||-
T Consensus 218 i~~Av~~ar~~~p~~kIeVEVdt-----lde----a~eAl~aGaD~I~LDn~-~~~~l~~av~~l~~-~v~--ieaSGGI 284 (320)
T 3paj_A 218 IRQAISTAKQLNPGKPVEVETET-----LAE----LEEAISAGADIIMLDNF-SLEMMREAVKINAG-RAA--LENSGNI 284 (320)
T ss_dssp HHHHHHHHHHHSTTSCEEEEESS-----HHH----HHHHHHTTCSEEEEESC-CHHHHHHHHHHHTT-SSE--EEEESSC
T ss_pred HHHHHHHHHHhCCCCeEEEEECC-----HHH----HHHHHHcCCCEEEECCC-CHHHHHHHHHHhCC-CCe--EEEECCC
Confidence 44444443333345455555544 343 33445689999999986 56889999887642 111 1222343
Q ss_pred CCCCCHHHHHhcCCCEEeccc
Q 012478 291 TPILNPLELEELGFKLVAYPL 311 (462)
Q Consensus 291 tP~ls~~eL~~lGv~~V~yp~ 311 (462)
++ -+..++.+.|+..++.+.
T Consensus 285 t~-~~I~~~a~tGVD~isvGa 304 (320)
T 3paj_A 285 TL-DNLKECAETGVDYISVGA 304 (320)
T ss_dssp CH-HHHHHHHTTTCSEEECTH
T ss_pred CH-HHHHHHHHcCCCEEEECc
Confidence 32 367889999999999976
No 469
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=83.14 E-value=16 Score=37.05 Aligned_cols=151 Identities=15% Similarity=0.058 Sum_probs=85.3
Q ss_pred HHHHHHH-HhCCcEEEec---cHHHHhhh---ccC--CCC-CCCCHHH----HHHHHHHHHhhcC-CcEEEeCCC-----
Q 012478 100 LSAKLVE-KSGFSFCFTS---GFSISAAR---LAL--PDT-GFISYGE----MVDQGQLITQAVS-IPVIGDGDN----- 159 (462)
Q Consensus 100 lSArl~e-~aGfdaI~vS---G~avSas~---lG~--PD~-g~vsl~E----ml~~~~~I~ra~~-iPVIaD~Dt----- 159 (462)
-.|+.+. ++|||+|=+- |+-+.-.. ... -|. |-.+++. +++.++.|+++++ -||.+-+--
T Consensus 178 ~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis~~~~~~ 257 (379)
T 3aty_A 178 EGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGVH 257 (379)
T ss_dssp HHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGG
T ss_pred HHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEECcccccc
Confidence 3677888 9999999875 33232110 011 232 3225543 3455566666654 478882211
Q ss_pred C--CCCH-HHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhc
Q 012478 160 G--YGNA-MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA 236 (462)
Q Consensus 160 G--yG~~-~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~ 236 (462)
+ -|.. ....+.++.++++|++.|++-..... . +-++. + +.+|+. + .+..++.+++-+
T Consensus 258 ~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~-------~-~~~~~-~-~~~ir~---~---~~iPvi~~G~it---- 317 (379)
T 3aty_A 258 GMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMV-------N-QQIGD-V-VAWVRG---S---YSGVKISNLRYD---- 317 (379)
T ss_dssp GCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTT-------S-CCCCC-H-HHHHHT---T---CCSCEEEESSCC----
T ss_pred cCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcC-------C-CCccH-H-HHHHHH---H---CCCcEEEECCCC----
Confidence 1 1333 56788899999999999999654311 0 11232 2 444432 2 234555555541
Q ss_pred ccHHHHHHHHHHhHhcC-CcEEEec--CCCCHHHHHHHHHhCC
Q 012478 237 LSLEESLRRSRAFADAG-ADVLFID--ALASKEEMKAFCEISP 276 (462)
Q Consensus 237 ~gldeAI~RakAy~eAG-AD~Ifie--~~~s~eei~~i~~~v~ 276 (462)
.+.+..+.+.| ||+|.+- .+.+++..+++.+..+
T Consensus 318 ------~~~a~~~l~~g~aD~V~igR~~l~~P~l~~k~~~g~~ 354 (379)
T 3aty_A 318 ------FEEADQQIREGKVDAVAFGAKFIANPDLVERAQQNWP 354 (379)
T ss_dssp ------HHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCC
T ss_pred ------HHHHHHHHHcCCCeEEEecHHHHhCcHHHHHHHcCCC
Confidence 23456666777 9999983 3456677777776543
No 470
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=83.12 E-value=9.7 Score=37.65 Aligned_cols=101 Identities=21% Similarity=0.287 Sum_probs=67.3
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHH
Q 012478 161 YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (462)
Q Consensus 161 yG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gld 240 (462)
.+++..+.+.++ +.|...+||-= |.. |. +.++-+++|++++++. |+++.+ |.|+-.....+
T Consensus 78 ~~~~e~~~~~~~---~~G~~~~KiKv-------g~~-g~---~~~~d~~~v~avR~~~---G~~~~L--~vDaN~~w~~~ 138 (327)
T 2opj_A 78 AVGPEEAARIVA---SSGCTTAKVKV-------AER-GQ---SEANDVARVEAVRDAL---GPRGRV--RIDVNGAWDVD 138 (327)
T ss_dssp SCCHHHHHHHHH---HHCCSEEEEEC-------CC----------CHHHHHHHHHHHH---CTTSEE--EEECTTCSCHH
T ss_pred CCCHHHHHHHHH---HCCCCEEEEEe-------CCC-CC---CHHHHHHHHHHHHHHh---CCCCEE--EEECCCCCCHH
Confidence 346665544443 57999999832 211 11 1234478888887764 566544 56888888899
Q ss_pred HHHHHHHHhHhcCCcEEEecCC-CCHHHHHHHHHhCCCCceeee
Q 012478 241 ESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMAN 283 (462)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N 283 (462)
+|++.++++.+. +..|+|-+ ++.+.++++.+..+ +|+.+.
T Consensus 139 ~A~~~~~~L~~~--~l~~iEqP~~~~~~~~~l~~~~~-iPIa~d 179 (327)
T 2opj_A 139 TAVRMIRLLDRF--ELEYVEQPCATVDELAEVRRRVS-VPIAAD 179 (327)
T ss_dssp HHHHHHHHHGGG--CEEEEECCSSSHHHHHHHHHHCS-SCEEC-
T ss_pred HHHHHHHHHHhc--CCcEEeCCCCCHHHHHHHHhhCC-CCEEcC
Confidence 999999999885 57788765 46788999998876 676543
No 471
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=83.10 E-value=18 Score=37.28 Aligned_cols=135 Identities=14% Similarity=0.075 Sum_probs=94.0
Q ss_pred chHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhh-------hccCC---CCCCCCHHHHHHHHHHH
Q 012478 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAA-------RLALP---DTGFISYGEMVDQGQLI 145 (462)
Q Consensus 76 ~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas-------~lG~P---D~g~vsl~Eml~~~~~I 145 (462)
..-+.|.+.-++-+..++-.+||.-++.++++.|.+++-++|.-+.+. ..|.| .+|.-|++|+...++.|
T Consensus 101 e~~~~L~~~~~~~Gi~~~stpfD~~svd~l~~~~vd~~KIgS~~~~N~pLL~~va~~gKPViLStGmaTl~Ei~~Ave~i 180 (385)
T 1vli_A 101 EWILPLLDYCREKQVIFLSTVCDEGSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMIFSTAGAEISDVHEAWRTI 180 (385)
T ss_dssp GGHHHHHHHHHHTTCEEECBCCSHHHHHHHHTTCCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEccCCHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHH
Confidence 445667777777889999999999999999999999999998765432 34777 46788999999888777
Q ss_pred Hh--------------------------------hc-CCcEEEeCCCCCC-CHHHHHHHHHHHHHhCccEEEeCCCCCCC
Q 012478 146 TQ--------------------------------AV-SIPVIGDGDNGYG-NAMNVKRTVKGYIKAGFAGIILEDQVSPK 191 (462)
Q Consensus 146 ~r--------------------------------a~-~iPVIaD~DtGyG-~~~nv~rtVk~l~~AGaaGI~IEDq~~PK 191 (462)
.. .. ++|| +|-|..-| .+. ....+.+||. .||=-..|.
T Consensus 181 ~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~lpV-G~SdHt~G~~~~-----~~AAvAlGA~--iIEkHftld 252 (385)
T 1vli_A 181 RAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVI-GFSDHSEHPTEA-----PCAAVRLGAK--LIEKHFTID 252 (385)
T ss_dssp HTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTSEE-EEEECCSSSSHH-----HHHHHHTTCS--EEEEEBCSC
T ss_pred HHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCCCCE-EeCCCCCCchHH-----HHHHHHcCCC--EEEeCCCcc
Confidence 43 24 5777 78888777 332 2334468998 567543332
Q ss_pred CC-CCCCCCcccCHHHHHHHHHHHHHHH
Q 012478 192 GC-GHTRGRKVVSREEAVMRIKAAVDAR 218 (462)
Q Consensus 192 rC-GH~~gk~Lvp~ee~~~kI~AA~~Ar 218 (462)
+- +-.+++.-+.++|+.+-++.++...
T Consensus 253 ra~~G~D~~~SL~P~ef~~lv~~ir~i~ 280 (385)
T 1vli_A 253 KNLPGADHSFALNPDELKEMVDGIRKTE 280 (385)
T ss_dssp TTSSCSSCTTSBCHHHHHHHHHHHHHHH
T ss_pred ccCCCCchhhhCCHHHHHHHHHHHHHHH
Confidence 21 1124455566777777777776665
No 472
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=83.03 E-value=25 Score=34.13 Aligned_cols=163 Identities=13% Similarity=0.103 Sum_probs=82.9
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCC--CCCCCCCCCCcc-----------cCHHHHHHHHHHHHHH
Q 012478 151 IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVS--PKGCGHTRGRKV-----------VSREEAVMRIKAAVDA 217 (462)
Q Consensus 151 iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~--PKrCGH~~gk~L-----------vp~ee~~~kI~AA~~A 217 (462)
..+|.=.-.||-+.....+.++.++++||+.|.|- -.+ |- .+|..+ +..+...+-|+.+++.
T Consensus 20 ~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElG-iPfSDP~----aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~ 94 (271)
T 3nav_A 20 GAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELG-MPFSDPL----ADGPTIQGANLRALAAKTTPDICFELIAQIRAR 94 (271)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEE-CCCCCGG----GCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEC-CCCCCCC----CCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc
Confidence 44555556688888888999999999999999772 111 21 122111 1122222333333322
Q ss_pred HHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCCCH--HHHHHHHHhCCCCceeeeeeecCCCCCCCC
Q 012478 218 RKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASK--EEMKAFCEISPLVPKMANMLEGGGKTPILN 295 (462)
Q Consensus 218 r~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~s~--eei~~i~~~v~~vP~~~N~l~~~g~tP~ls 295 (462)
. ...+++++.--+-....+++.- ++...+||+|.+.++-++-+ +++.+.++... +.. +-++ +|.-+
T Consensus 95 ~--~~~Pivlm~Y~n~v~~~g~~~f---~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~g-l~~-I~lv-----ap~t~ 162 (271)
T 3nav_A 95 N--PETPIGLLMYANLVYARGIDDF---YQRCQKAGVDSVLIADVPTNESQPFVAAAEKFG-IQP-IFIA-----PPTAS 162 (271)
T ss_dssp C--TTSCEEEEECHHHHHHTCHHHH---HHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTT-CEE-EEEE-----CTTCC
T ss_pred C--CCCCEEEEecCcHHHHHhHHHH---HHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcC-CeE-EEEE-----CCCCC
Confidence 1 2346666644333334566544 45566899999888777542 35556666553 222 2122 22223
Q ss_pred H---HHHHhcCCCEEec----cchHHHHH-HHHHHHHHHHHHc
Q 012478 296 P---LELEELGFKLVAY----PLSLIGVS-VRAMQDALTAIKG 330 (462)
Q Consensus 296 ~---~eL~~lGv~~V~y----p~~ll~aa-~~Am~~~l~~l~~ 330 (462)
. +++.+.+-..|-+ +.+..+.. -..+.+.++.+++
T Consensus 163 ~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~ 205 (271)
T 3nav_A 163 DETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQ 205 (271)
T ss_dssp HHHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHH
Confidence 3 4444555444333 33333321 1235667777775
No 473
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=83.02 E-value=3.6 Score=40.99 Aligned_cols=142 Identities=17% Similarity=0.145 Sum_probs=65.8
Q ss_pred HHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHH------HHHHHHHHHhhc-C
Q 012478 78 AKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGE------MVDQGQLITQAV-S 150 (462)
Q Consensus 78 a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~E------ml~~~~~I~ra~-~ 150 (462)
+.++.+..+.....++-+=-.....|.+++. |++++|.. +-++|++|..++-=++ .....++..+.. .
T Consensus 135 t~~~v~a~~g~~~~i~~TRKt~Pglr~l~ky---Av~~GGg~--nHR~gL~d~vlikdNHi~~~G~i~~Av~~~r~~~p~ 209 (298)
T 3gnn_A 135 TRQYVDRIADTRARILDTRKTLPGLRLAQKY---AVRVGGGA--NQRLALYAGILIKENHIAAAGGVGEALDAAFALNAE 209 (298)
T ss_dssp HHHHHHHTTTSSCCEECCSCCCTTCHHHHHH---HHHHTTCC--CC-------------------CHHHHHHHHHHHC--
T ss_pred HHHHHHHhCCCCeEEEEecCCCcchHHHHHh---hHHhcCcc--ceecCCCcEEEEeHHHHHHcCCHHHHHHHHHHhCCC
Confidence 3445555543222222222222334666654 56666532 2468999987762221 122233333332 4
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEe
Q 012478 151 IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVAR 230 (462)
Q Consensus 151 iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiAR 230 (462)
.||.+..|+= .. +++..++|+++|.| |.. +.+++ +.+++.. .+...|.|-
T Consensus 210 ~~ieVEvdtl----de----~~eAl~aGaD~I~L-Dn~--------------~~~~l----~~av~~i---~~~v~ieaS 259 (298)
T 3gnn_A 210 VPVQIEVETL----DQ----LRTALAHGARSVLL-DNF--------------TLDMM----RDAVRVT---EGRAVLEVS 259 (298)
T ss_dssp CCCEEEESSH----HH----HHHHHHTTCEEEEE-ESC--------------CHHHH----HHHHHHH---TTSEEEEEE
T ss_pred CCEEEEeCCH----HH----HHHHHHcCCCEEEE-CCC--------------CHHHH----HHHHHHh---CCCCeEEEE
Confidence 7888887762 22 45566789999999 432 23433 2222221 234444332
Q ss_pred cchhhcccHHHHHHHHHHhHhcCCcEEEecCC
Q 012478 231 TDSRQALSLEESLRRSRAFADAGADVLFIDAL 262 (462)
Q Consensus 231 TDA~~~~gldeAI~RakAy~eAGAD~Ifie~~ 262 (462)
. +++ .++.+.|+++|+|.|-+-++
T Consensus 260 ----G--GI~--~~~i~~~a~tGVD~isvG~l 283 (298)
T 3gnn_A 260 ----G--GVN--FDTVRAIAETGVDRISIGAL 283 (298)
T ss_dssp ----S--SCS--TTTHHHHHHTTCSEEECGGG
T ss_pred ----c--CCC--HHHHHHHHHcCCCEEEECCe
Confidence 2 222 44788999999999987665
No 474
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=82.99 E-value=2.3 Score=42.92 Aligned_cols=90 Identities=14% Similarity=0.107 Sum_probs=53.9
Q ss_pred CCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHH----hhcC---CcEEEeCCCC
Q 012478 88 PGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLIT----QAVS---IPVIGDGDNG 160 (462)
Q Consensus 88 ~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~----ra~~---iPVIaD~DtG 160 (462)
+-++++-|+.+.-.|+.+.++|+|+|.+|..+..... +++.+ ++.-+.+..+...+ ..++ +|||+|. |
T Consensus 211 ~~pvi~ggi~t~e~a~~~~~~Gad~i~vg~Gg~~~~~--~~~~g-~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~G--G 285 (393)
T 2qr6_A 211 DVPVIAGGVNDYTTALHMMRTGAVGIIVGGGENTNSL--ALGME-VSMATAIADVAAARRDYLDETGGRYVHIIADG--S 285 (393)
T ss_dssp SSCEEEECCCSHHHHHHHHTTTCSEEEESCCSCCHHH--HTSCC-CCHHHHHHHHHHHHHHHHHHHTSCCCEEEECS--S
T ss_pred CCCEEECCcCCHHHHHHHHHcCCCEEEECCCcccccc--cCCCC-CChHHHHHHHHHHHHHhHhhcCCcceEEEEEC--C
Confidence 4567777899999999999999999999731111001 11222 33333333332221 1133 9999984 3
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCC
Q 012478 161 YGNAMNVKRTVKGYIKAGFAGIILED 186 (462)
Q Consensus 161 yG~~~nv~rtVk~l~~AGaaGI~IED 186 (462)
..+..++. ++..+||++|.+=-
T Consensus 286 I~~~~dv~----kalalGA~~V~iG~ 307 (393)
T 2qr6_A 286 IENSGDVV----KAIACGADAVVLGS 307 (393)
T ss_dssp CCSHHHHH----HHHHHTCSEEEECG
T ss_pred CCCHHHHH----HHHHcCCCEEEECH
Confidence 33454554 34458999999933
No 475
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=82.98 E-value=4.2 Score=39.27 Aligned_cols=100 Identities=18% Similarity=0.191 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHhhcC---CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHH
Q 012478 135 YGEMVDQGQLITQAVS---IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRI 211 (462)
Q Consensus 135 l~Eml~~~~~I~ra~~---iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI 211 (462)
++.+.+..+.|+++++ ++||. |+||=+.+++.+.++...++||+-|+---+-. .+|-.+ +.++-+
T Consensus 126 ~~~v~~eI~~v~~a~~~~~lKVIl--Et~~Lt~eei~~a~~ia~~aGADfVKTSTGf~------~ggAt~----~dv~lm 193 (239)
T 3ngj_A 126 YDDVEKDVKAVVDASGKALTKVII--ECCYLTNEEKVEVCKRCVAAGAEYVKTSTGFG------THGATP----EDVKLM 193 (239)
T ss_dssp HHHHHHHHHHHHHHHTTSEEEEEC--CGGGSCHHHHHHHHHHHHHHTCSEEECCCSSS------SCCCCH----HHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCceEEEE--ecCCCCHHHHHHHHHHHHHHCcCEEECCCCCC------CCCCCH----HHHHHH
Confidence 4556777777777664 55655 88987778899999999999999998853310 122222 222333
Q ss_pred HHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEe
Q 012478 212 KAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFI 259 (462)
Q Consensus 212 ~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifi 259 (462)
+..+ |.++-|.|=--- .. .+.+.+|.+|||+-|=.
T Consensus 194 r~~v------g~~v~VKasGGI---rt----~~da~~~i~aGA~riGt 228 (239)
T 3ngj_A 194 KDTV------GDKALVKAAGGI---RT----FDDAMKMINNGASRIGA 228 (239)
T ss_dssp HHHH------GGGSEEEEESSC---CS----HHHHHHHHHTTEEEEEE
T ss_pred HHhh------CCCceEEEeCCC---CC----HHHHHHHHHhcccceec
Confidence 3222 233444432111 11 24688899999997643
No 476
>2fds_A Orotidine-monophosphate-decarboxylase; TIM barrel, structural genomics, structural genomics consortium, SGC, unknown function; 1.72A {Plasmodium berghei} SCOP: c.1.2.3 PDB: 2aqw_A
Probab=82.94 E-value=5.4 Score=40.55 Aligned_cols=108 Identities=18% Similarity=0.145 Sum_probs=60.1
Q ss_pred cCCcEEEeCCCC-CCCHHHHHHHHHHHHH-hCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHH-HHHhhCCCe
Q 012478 149 VSIPVIGDGDNG-YGNAMNVKRTVKGYIK-AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVD-ARKESGSDI 225 (462)
Q Consensus 149 ~~iPVIaD~DtG-yG~~~nv~rtVk~l~~-AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~-Ar~~~g~d~ 225 (462)
.+.+|++|+=.| -|+. +...++.+.+ .||+.|.+---. |.. -|+++++ .....|.+.
T Consensus 150 ~g~~VflDlK~~DIgnT--v~~ya~a~~~~lgaD~vTVh~~~---------G~~---------sl~~a~~~~a~~~gkgv 209 (352)
T 2fds_A 150 MNIPTMLDMKINDIGNT--VKNYRKFIFEYLKSDSCTINVYM---------GTS---------MLKDICFDYEKNKYYSA 209 (352)
T ss_dssp TTCCEEEEEEECCCHHH--HHHHHHHHHTTSCCSEEEECCTT---------CST---------THHHHSEETTTTEECEE
T ss_pred CCCeEEEEeecCchHHH--HHHHHHHHHhhcCCCEEEEeCCC---------CHH---------HHHHHHHHHhhccCCce
Confidence 389999999886 2332 3444555555 799999994431 211 2333332 222223468
Q ss_pred EEEEecchhhcccH-----------HH-HHHHH-HHhHhcCCc------EEEecCCCCHHHHHHHHHhCCC
Q 012478 226 VIVARTDSRQALSL-----------EE-SLRRS-RAFADAGAD------VLFIDALASKEEMKAFCEISPL 277 (462)
Q Consensus 226 vIiARTDA~~~~gl-----------de-AI~Ra-kAy~eAGAD------~Ifie~~~s~eei~~i~~~v~~ 277 (462)
+++|+|.......| .+ ..+.+ +.-.++|.| .+++. -++.++++.+.+..+.
T Consensus 210 ~lLa~TSn~~~~dlq~~~~~~g~~l~~~v~~~v~~la~~~G~d~~~~~~GvVvG-aTs~~e~~~iR~~~~~ 279 (352)
T 2fds_A 210 YVLIKTTNKDSFIFQNELSINDKQAYIVMAEETQKMATDLKIDQNNEFIGFVVG-SNAFEEMKIIRNKFPD 279 (352)
T ss_dssp EEEEECSSGGGHHHHTTCEETTEEHHHHHHHHHHHHHHHHTTGGGTCCEEEEEC-TTCHHHHHHHHHHSTT
T ss_pred EEEEEeCCcCHHHHHHhhccCCCcHHHHHHHHHHHHHHHhCCCccCCcceEEEc-CCCHHHHHHHHHhCCC
Confidence 89999854322112 12 22334 223466765 66654 4567888888776654
No 477
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=82.81 E-value=14 Score=37.05 Aligned_cols=147 Identities=16% Similarity=0.140 Sum_probs=89.2
Q ss_pred HHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEE----Eecchh--hcccHHHHH
Q 012478 170 TVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV----ARTDSR--QALSLEESL 243 (462)
Q Consensus 170 tVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIi----ARTDA~--~~~gldeAI 243 (462)
+|+..++.|++|+++==+.++ | .+ ...++++.+..+++...+.|-.+++. .|.+.. ...+.+-..
T Consensus 133 sVe~AvrlGADaV~~l~~i~~---G----s~--~e~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va 203 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRINL---S----DA--GTAPTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVI 203 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEECT---T----CT--THHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHH
T ss_pred CHHHHHHCCCCEEEEEEEECC---C----Ch--hHHHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHH
Confidence 567777889999884211110 1 01 12567788888887777777677663 452221 113445555
Q ss_pred HHHHHhHhcCCc----EEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCC-----CHHHHHh-cCCCEEeccchH
Q 012478 244 RRSRAFADAGAD----VLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPIL-----NPLELEE-LGFKLVAYPLSL 313 (462)
Q Consensus 244 ~RakAy~eAGAD----~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~l-----s~~eL~~-lGv~~V~yp~~l 313 (462)
.-++...|.||| .|=++-. |.++++++..+ +|++ +.+|+++... ..++.-+ .|.+=+++|-.+
T Consensus 204 ~aaRiAaELGADs~~tivK~~y~---e~f~~Vv~a~~-vPVV---iaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNI 276 (307)
T 3fok_A 204 QSVAIAAGLGNDSSYTWMKLPVV---EEMERVMESTT-MPTL---LLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTL 276 (307)
T ss_dssp HHHHHHHTCSSCCSSEEEEEECC---TTHHHHGGGCS-SCEE---EECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTT
T ss_pred HHHHHHHHhCCCcCCCEEEeCCc---HHHHHHHHhCC-CCEE---EeCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhh
Confidence 556777899999 8877654 57888888765 5543 3454553211 1244445 588888888777
Q ss_pred HH---HHHHHHHHHHHHHHcCC
Q 012478 314 IG---VSVRAMQDALTAIKGGR 332 (462)
Q Consensus 314 l~---aa~~Am~~~l~~l~~g~ 332 (462)
+. .--.+|-+++..|-.+.
T Consensus 277 fQ~~~~dp~~~v~al~~iVH~~ 298 (307)
T 3fok_A 277 LYPQDGDVAAAVDTAARLVHTD 298 (307)
T ss_dssp SSCSSSCHHHHHHHHHHHHCCC
T ss_pred ccCCCCCHHHHHHHHHHHHHhh
Confidence 76 44455666666676554
No 478
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=82.64 E-value=1.7 Score=40.89 Aligned_cols=69 Identities=14% Similarity=0.135 Sum_probs=49.3
Q ss_pred HHHHHHHHhHhcCCcEEEecCC--------CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccch
Q 012478 241 ESLRRSRAFADAGADVLFIDAL--------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLS 312 (462)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~~--------~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ 312 (462)
+.++.+++|.++|||.|.+-.+ ...+.++++++.+. +|+.++ ++-...-..+++.+.|+..|+.+..
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~~~~-iPvi~~----ggi~~~~~i~~~~~~Gad~v~lg~~ 105 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTT-LPIIAS----GGAGKMEHFLEAFLAGADKALAASV 105 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTSSCSSCCCHHHHHHHGGGCC-SCEEEE----SCCCSTHHHHHHHHHTCSEEECCCC
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcccCCCcccHHHHHHHHHhcC-CCEEEE----CCCCCHHHHHHHHHcCCcHhhhhHH
Confidence 3467899999999999987432 23678888888764 676643 2322223577888899999999987
Q ss_pred HH
Q 012478 313 LI 314 (462)
Q Consensus 313 ll 314 (462)
++
T Consensus 106 ~~ 107 (266)
T 2w6r_A 106 FH 107 (266)
T ss_dssp C-
T ss_pred HH
Confidence 76
No 479
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=82.63 E-value=29 Score=42.83 Aligned_cols=191 Identities=12% Similarity=0.025 Sum_probs=114.7
Q ss_pred HHHHHHhCCCceEe-c---ccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhc--CCcE
Q 012478 80 SLRQILELPGVHQG-P---ACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV--SIPV 153 (462)
Q Consensus 80 ~LR~ll~~~~~iv~-p---~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~--~iPV 153 (462)
+|.+++. .-||+. | ++-++--|..+.++|.=+++.+ .+.++.+++.+.++.+.+.. +.|+
T Consensus 575 ~~t~~lg-~~PIi~a~M~~~vs~~~LaaAva~aGglG~i~g-------------~g~~~~e~l~~~i~~vk~~~~~~~p~ 640 (2060)
T 2uva_G 575 KMSRLLG-VPPVMVAGMTPTTVPWDFVAATMNAGYHIELAG-------------GGYYNAQKMSDAISKIEKAIPPGRGI 640 (2060)
T ss_dssp HHHHHHT-SCSEEECCCTTTTCSHHHHHHHHHTTCEECEEG-------------GGCCSHHHHHHHHHHHGGGSCTTCCE
T ss_pred hhhhccc-cceEEecCCCCccccHHHHHHHHHCCCEEEECc-------------CCCCCHHHHHHHHHHHHhhcccCCCe
Confidence 5667775 334432 2 3445555666666665333322 12457888888999998877 6898
Q ss_pred EEeCCCCCCCHH-HHHHHHHHHHHhCccE--EEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEe
Q 012478 154 IGDGDNGYGNAM-NVKRTVKGYIKAGFAG--IILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVAR 230 (462)
Q Consensus 154 IaD~DtGyG~~~-nv~rtVk~l~~AGaaG--I~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiAR 230 (462)
.++.-.-.-... -..+.++.+++.|+.- |.+--+ +-+.|++.+.|+.+ |..++.+
T Consensus 641 gvN~~~~~p~~~~~~~~~~~~~~~~gv~i~gv~~~~G-------------~p~~e~~~~~l~~~-------gi~~i~~-- 698 (2060)
T 2uva_G 641 TVNLIYVNPRAMGWQIPLLGRLRADGVPIEGLTIGAG-------------VPSIEVANEYIQTL-------GIRHISF-- 698 (2060)
T ss_dssp EEEEETTCTTHHHHHHHHHHHHHTTTCCEEEEEEESS-------------CCCHHHHHHHHHHS-------CCSEEEE--
T ss_pred EecccccCcccchhHHHHHHHHHHcCCCcceEeecCC-------------CCCHHHHHHHHHHc-------CCeEEEe--
Confidence 888765211211 1446788888889877 555221 11345676666543 3333322
Q ss_pred cchhhcccHHHHHHHHHHhHhcCCcEEE---ecCC-----CC--------HHHHHHHHHhCCCCceeeeeeecCCCCCCC
Q 012478 231 TDSRQALSLEESLRRSRAFADAGADVLF---IDAL-----AS--------KEEMKAFCEISPLVPKMANMLEGGGKTPIL 294 (462)
Q Consensus 231 TDA~~~~gldeAI~RakAy~eAGAD~If---ie~~-----~s--------~eei~~i~~~v~~vP~~~N~l~~~g~tP~l 294 (462)
..+..++++++.+.+++|||+|+ +++. .+ .+.+.++.+.+. +|+ +..||-.-.-
T Consensus 699 -----v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~g~~d~~~~~l~lv~~i~~~~~-ipv----iaaGGI~~g~ 768 (2060)
T 2uva_G 699 -----KPGSVDAIQQVINIAKANPTFPIILQWTGGRGGGHHSFEDFHQPILLMYSRIRKCSN-IVL----VAGSGFGGSE 768 (2060)
T ss_dssp -----CCCSHHHHHHHHHHHHHCTTSCEEEEECCTTSSSSCCSCCSHHHHHHHHHHHHTSTT-EEE----EEESSCCSHH
T ss_pred -----cCCHHHHHHHHHHHHHcCCCEEEEeeeEcccCCCCCCcccccchHHHHHHHHHHHcC-CCE----EEeCCCCCHH
Confidence 22457889999999999999999 6653 12 234555555543 443 3334432112
Q ss_pred CHHHHH-----------hcCCCEEeccchHHHH
Q 012478 295 NPLELE-----------ELGFKLVAYPLSLIGV 316 (462)
Q Consensus 295 s~~eL~-----------~lGv~~V~yp~~ll~a 316 (462)
....+- .||+.-|.+|..++.+
T Consensus 769 ~i~aaltg~ws~~~g~palGAdgV~~GT~f~~t 801 (2060)
T 2uva_G 769 DTYPYLTGSWSTKFGYPPMPFDGCMFGSRMMTA 801 (2060)
T ss_dssp HHHHHHHTCGGGTTTSCCCCCSCEEESGGGGGB
T ss_pred HHHHHhcCcchhhcCCCCCCCCEEEEchhhhcC
Confidence 345556 7899999999887765
No 480
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=82.58 E-value=38 Score=33.07 Aligned_cols=149 Identities=17% Similarity=0.261 Sum_probs=91.8
Q ss_pred HHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhC
Q 012478 143 QLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESG 222 (462)
Q Consensus 143 ~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g 222 (462)
+.+++.+++||+-= |+= =++-+++++ ..+||++|-|=-. +++.+++ +...+.+.++|
T Consensus 97 ~~vr~~v~lPvLrK-DFi-id~yQI~eA----r~~GADaILLI~a-------------~L~~~~l----~~l~~~A~~lG 153 (258)
T 4a29_A 97 RKIASSVSIPILMS-DFI-VKESQIDDA----YNLGADTVLLIVK-------------ILTEREL----ESLLEYARSYG 153 (258)
T ss_dssp HHHHTTCSSCEEEE-SCC-CSHHHHHHH----HHHTCSEEEEEGG-------------GSCHHHH----HHHHHHHHHTT
T ss_pred HHHHHhcCCCEeec-ccc-ccHHHHHHH----HHcCCCeeehHHh-------------hcCHHHH----HHHHHHHHHHh
Confidence 56677889998763 442 366666644 3579999988433 3344433 33344445567
Q ss_pred CCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCC------CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCH
Q 012478 223 SDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNP 296 (462)
Q Consensus 223 ~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~------~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~ 296 (462)
-+.+|=..+.. | ++|| .++||++|-|-.- .+.+...++...+|. -.+-+.|.|=++| -+.
T Consensus 154 l~~LvEVh~~~-------E-l~rA---l~~~a~iIGINNRnL~tf~vdl~~t~~L~~~ip~--~~~~VsESGI~t~-~dv 219 (258)
T 4a29_A 154 MEPLILINDEN-------D-LDIA---LRIGARFIGIMSRDFETGEINKENQRKLISMIPS--NVVKVAKLGISER-NEI 219 (258)
T ss_dssp CCCEEEESSHH-------H-HHHH---HHTTCSEEEECSBCTTTCCBCHHHHHHHHTTSCT--TSEEEEEESSCCH-HHH
T ss_pred HHHHHhcchHH-------H-HHHH---hcCCCcEEEEeCCCccccccCHHHHHHHHhhCCC--CCEEEEcCCCCCH-HHH
Confidence 78877665532 2 4454 4579999987532 356677777777653 2233456533332 245
Q ss_pred HHHHhcCCCEEeccchHHHHHHHHHHHHHHHHHcCCC
Q 012478 297 LELEELGFKLVAYPLSLIGVSVRAMQDALTAIKGGRI 333 (462)
Q Consensus 297 ~eL~~lGv~~V~yp~~ll~aa~~Am~~~l~~l~~g~~ 333 (462)
..|.+.|++-++.|-+++++. +..++|.+|..
T Consensus 220 ~~l~~~G~~a~LVGealmr~~-----d~~~~Li~G~~ 251 (258)
T 4a29_A 220 EELRKLGVNAFLISSSLMRNP-----EKIKELIEGSL 251 (258)
T ss_dssp HHHHHTTCCEEEECHHHHHCT-----THHHHHHC---
T ss_pred HHHHHCCCCEEEECHHHhCCC-----cHHHHHHcCch
Confidence 678899999999999999853 45566666643
No 481
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=82.54 E-value=5.4 Score=41.47 Aligned_cols=98 Identities=17% Similarity=0.271 Sum_probs=71.2
Q ss_pred CHHHHHHHHHHHHH-hCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHH
Q 012478 163 NAMNVKRTVKGYIK-AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEE 241 (462)
Q Consensus 163 ~~~nv~rtVk~l~~-AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~glde 241 (462)
+++.+.+.++++.+ .|...+||-- |. .+.++-+++|+|++++. +++.| +.|+-....+++
T Consensus 185 ~~e~~~~~a~~~~~~~Gf~~~KlKv-------G~------~~~~~Di~~v~avRea~----pd~~L--~vDaN~~w~~~~ 245 (455)
T 3pfr_A 185 DTQAVIELAAASKDRYGFKDFKLKG-------GV------FEGSKEIDTVIELKKHF----PDARI--TLDPNGCWSLDE 245 (455)
T ss_dssp SHHHHHHHHHHHHHHHCCSCEEEEC-------SS------SCHHHHHHHHHHHHHHC----TTCCE--EEECTTBSCHHH
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEcC-------CC------CCHHHHHHHHHHHHHhC----CCCeE--eecCCCCCCHHH
Confidence 57788888888776 6999999932 22 13456678999988874 45433 458888888999
Q ss_pred HHHHHHHhHhcCCcEEEecCCC---C----HHHHHHHHHhCCCCceeee
Q 012478 242 SLRRSRAFADAGADVLFIDALA---S----KEEMKAFCEISPLVPKMAN 283 (462)
Q Consensus 242 AI~RakAy~eAGAD~Ifie~~~---s----~eei~~i~~~v~~vP~~~N 283 (462)
|++.++++++. ..|+|-+- + .+.++++.+..+ +|+..+
T Consensus 246 A~~~~~~L~~~---l~~iEeP~~~~d~~~~~~~~~~l~~~~~-iPIa~d 290 (455)
T 3pfr_A 246 AIQLCKGLNDV---LTYAEDPCIGENGYSGREIMAEFRRRTG-IPTATN 290 (455)
T ss_dssp HHHHHTTCTTT---CSEEESCBCCBTTBCHHHHHHHHHHHHC-CCEEES
T ss_pred HHHHHHhhccc---ceeeecCCChhhccchHHHHHHHHhcCC-CCEEeC
Confidence 99999999764 55888652 2 467889988876 687655
No 482
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=82.44 E-value=1.7 Score=45.20 Aligned_cols=82 Identities=16% Similarity=0.073 Sum_probs=48.4
Q ss_pred eEecccCChHHHHHHHHhCCcEEEec-cHHHHhh---hccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHH
Q 012478 91 HQGPACFDALSAKLVEKSGFSFCFTS-GFSISAA---RLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMN 166 (462)
Q Consensus 91 iv~p~ayDalSArl~e~aGfdaI~vS-G~avSas---~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~n 166 (462)
+++-++-..-.|+.+. |++++.++ |.+..+. ..|+ + ++.-..+..+..+++..++|||+|. |..+..+
T Consensus 271 vi~k~v~~~~~a~~l~--G~d~v~vg~g~g~~~~~r~~~~~---g-~~~~~~l~~~~~~~~~~~vpVia~G--Gi~~~~d 342 (486)
T 2cu0_A 271 FIVGNIANPKAVDDLT--FADAVKVGIGPGSICTTRIVAGV---G-VPQITAVAMVADRAQEYGLYVIADG--GIRYSGD 342 (486)
T ss_dssp EEEEEECCHHHHTTCT--TSSEEEECSSCSTTBCHHHHTCC---C-CCHHHHHHHHHHHHHHHTCEEEEES--CCCSHHH
T ss_pred cccCCcCCHHHHHHhh--CCCeEEEeeeeccceeeeEEeec---C-cchHHHHHHHHHHHHHcCCcEEecC--CCCCHHH
Confidence 3344444444454444 89998884 2111000 0111 1 2333556666777777789999997 6666666
Q ss_pred HHHHHHHHHHhCccEEEe
Q 012478 167 VKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 167 v~rtVk~l~~AGaaGI~I 184 (462)
+. |.+ .+||++|.+
T Consensus 343 i~---kal-alGA~~v~~ 356 (486)
T 2cu0_A 343 IV---KAI-AAGADAVML 356 (486)
T ss_dssp HH---HHH-HTTCSEEEE
T ss_pred HH---HHH-HcCCCceee
Confidence 65 333 489999999
No 483
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=82.37 E-value=3.6 Score=37.58 Aligned_cols=69 Identities=25% Similarity=0.302 Sum_probs=43.3
Q ss_pred HHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccE
Q 012478 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAG 181 (462)
Q Consensus 102 Arl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaG 181 (462)
++.+++.|++.|++.+.... |... + .. ++..+.+++.+++||+++. |-.+..++. ++.++||+|
T Consensus 160 ~~~~~~~G~d~i~~~~~~~~----g~~~-~-~~----~~~i~~l~~~~~~pvia~G--Gi~~~~~~~----~~~~~Ga~~ 223 (253)
T 1h5y_A 160 AKEVEELGAGEILLTSIDRD----GTGL-G-YD----VELIRRVADSVRIPVIASG--GAGRVEHFY----EAAAAGADA 223 (253)
T ss_dssp HHHHHHHTCSEEEEEETTTT----TTCS-C-CC----HHHHHHHHHHCSSCEEEES--CCCSHHHHH----HHHHTTCSE
T ss_pred HHHHHhCCCCEEEEecccCC----CCcC-c-CC----HHHHHHHHHhcCCCEEEeC--CCCCHHHHH----HHHHcCCcH
Confidence 67778899999998753321 1111 1 12 2344556666789999983 333444444 455799999
Q ss_pred EEeCC
Q 012478 182 IILED 186 (462)
Q Consensus 182 I~IED 186 (462)
+.+=-
T Consensus 224 v~vgs 228 (253)
T 1h5y_A 224 VLAAS 228 (253)
T ss_dssp EEESH
T ss_pred HHHHH
Confidence 99843
No 484
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=82.35 E-value=1.8 Score=43.97 Aligned_cols=70 Identities=13% Similarity=0.082 Sum_probs=47.8
Q ss_pred HHHHHHhHhcCCcEEEe--cC-------CCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchH
Q 012478 243 LRRSRAFADAGADVLFI--DA-------LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSL 313 (462)
Q Consensus 243 I~RakAy~eAGAD~Ifi--e~-------~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~l 313 (462)
.+.++.+.++|||.|.+ ++ +++.+.+.++.+.++ .|+++ .||-...-+..++-++|.+.|..+..+
T Consensus 236 ~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~~-~pVia----~GGI~~~~dv~kal~~GAdaV~iGr~~ 310 (380)
T 1p4c_A 236 AEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKTG-KPVLI----DSGFRRGSDIVKALALGAEAVLLGRAT 310 (380)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHHC-SCEEE----CSSCCSHHHHHHHHHTTCSCEEESHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHcC-CeEEE----ECCCCCHHHHHHHHHhCCcHhhehHHH
Confidence 34688899999999998 32 234556777777665 35543 345332235566777999999999988
Q ss_pred HHHH
Q 012478 314 IGVS 317 (462)
Q Consensus 314 l~aa 317 (462)
+...
T Consensus 311 l~~~ 314 (380)
T 1p4c_A 311 LYGL 314 (380)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 485
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=82.10 E-value=37 Score=32.56 Aligned_cols=118 Identities=17% Similarity=0.196 Sum_probs=74.7
Q ss_pred CHHHHHHHHHHHHhhc-CCcEEEeCCC----C-C--CCHHHHHHHHHHHHHhC-ccEEEeCCCCCCCCCCCCCCCcccCH
Q 012478 134 SYGEMVDQGQLITQAV-SIPVIGDGDN----G-Y--GNAMNVKRTVKGYIKAG-FAGIILEDQVSPKGCGHTRGRKVVSR 204 (462)
Q Consensus 134 sl~Eml~~~~~I~ra~-~iPVIaD~Dt----G-y--G~~~nv~rtVk~l~~AG-aaGI~IEDq~~PKrCGH~~gk~Lvp~ 204 (462)
+.+++.+.++.+.+.. ++|+|+-.-+ | | ++...-.+..+...+.| ++-|=||-...
T Consensus 61 ~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~~ll~~~~~~g~~d~iDvEl~~~--------------- 125 (257)
T 2yr1_A 61 DQERVLATANGLRNIAGEIPILFTIRSEREGGQPIPLNEAEVRRLIEAICRSGAIDLVDYELAYG--------------- 125 (257)
T ss_dssp CHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCSSCHHHHHHHHHHHHHHTCCSEEEEEGGGT---------------
T ss_pred cHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEECCCC---------------
Confidence 3567777777787776 7999997743 5 3 24445556678888888 99999987631
Q ss_pred HHHHHHHHHHHHHHHhhCCCe-EEEEecchhhcccHHHHHHHHHHhHhcCCcEEEec-CCCCHHHHHHHH
Q 012478 205 EEAVMRIKAAVDARKESGSDI-VIVARTDSRQALSLEESLRRSRAFADAGADVLFID-ALASKEEMKAFC 272 (462)
Q Consensus 205 ee~~~kI~AA~~Ar~~~g~d~-vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie-~~~s~eei~~i~ 272 (462)
+ .+.++ .+.... .+. +|...-|-......++.+++.+...+.|||++=+- ...+.++..++.
T Consensus 126 ~-~~~~l---~~~~~~--~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~gaDivKia~~a~s~~D~l~ll 189 (257)
T 2yr1_A 126 E-RIADV---RRMTEE--CSVWLVVSRHYFDGTPRKETLLADMRQAERYGADIAKVAVMPKSPEDVLVLL 189 (257)
T ss_dssp T-HHHHH---HHHHHH--TTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHH
T ss_pred h-hHHHH---HHHHHh--CCCEEEEEecCCCCCcCHHHHHHHHHHHHhcCCCEEEEEeccCCHHHHHHHH
Confidence 1 12222 222222 234 45555553333346888999999999999998553 345555555444
No 486
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=81.97 E-value=3.1 Score=41.11 Aligned_cols=117 Identities=18% Similarity=0.150 Sum_probs=70.3
Q ss_pred CcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEEeCCCCCCCH--H------HHHHHHHHHHHhCccE
Q 012478 110 FSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNA--M------NVKRTVKGYIKAGFAG 181 (462)
Q Consensus 110 fdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIaD~DtGyG~~--~------nv~rtVk~l~~AGaaG 181 (462)
+|.+=.++ +.++ . +|. +.|.++. ++..++++.- |++ + .+.+-++...+.|...
T Consensus 66 ID~lKfg~-GTs~-l--~~~-----l~ekI~l----~~~~gV~v~~------GGTlfE~~l~qg~~~~yl~~~k~lGF~~ 126 (276)
T 1u83_A 66 IDFVKFGW-GTSL-L--TKD-----LEEKIST----LKEHDITFFF------GGTLFEKYVSQKKVNEFHRYCTYFGCEY 126 (276)
T ss_dssp CCEEEECT-TGGG-G--CTT-----HHHHHHH----HHHTTCEEEE------CHHHHHHHHHTTCHHHHHHHHHHTTCSE
T ss_pred cceEEecC-cchh-h--hHH-----HHHHHHH----HHHcCCeEeC------CcHHHHHHHHcCcHHHHHHHHHHcCCCE
Confidence 67777664 4332 2 444 6666544 4456787753 331 1 2334456666789999
Q ss_pred EEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEE---ecch--hhcccHHHHHHHHHHhHhcCCcE
Q 012478 182 IILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA---RTDS--RQALSLEESLRRSRAFADAGADV 256 (462)
Q Consensus 182 I~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiA---RTDA--~~~~gldeAI~RakAy~eAGAD~ 256 (462)
|-|-|+.. -+|.++.+.-|+ .|.. .|.|+. .-|. ....+.++.|+++++..+||||.
T Consensus 127 IEISdGti-----------~l~~~~~~~lI~---~a~~----~f~Vl~EvG~K~~~~~~~~~~~~~I~~~~~dLeAGA~~ 188 (276)
T 1u83_A 127 IEISNGTL-----------PMTNKEKAAYIA---DFSD----EFLVLSEVGSKDAELASRQSSEEWLEYIVEDMEAGAEK 188 (276)
T ss_dssp EEECCSSS-----------CCCHHHHHHHHH---HHTT----TSEEEEECSCCC------CCSTHHHHHHHHHHHHTEEE
T ss_pred EEECCCcc-----------cCCHHHHHHHHH---HHHh----hcEEeeeccccCccccCCCCHHHHHHHHHHHHHCCCcE
Confidence 99998752 256665554444 4432 365553 3333 22345688999999999999999
Q ss_pred EEecCCC
Q 012478 257 LFIDALA 263 (462)
Q Consensus 257 Ifie~~~ 263 (462)
|++|+-.
T Consensus 189 ViiEaRE 195 (276)
T 1u83_A 189 VITEARE 195 (276)
T ss_dssp EEEC---
T ss_pred EEEeeec
Confidence 9999844
No 487
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=81.46 E-value=8.7 Score=37.96 Aligned_cols=133 Identities=12% Similarity=0.147 Sum_probs=80.7
Q ss_pred HHHHHHHhCCcEEEeccHH-H-HhhhccCCCCCCCCHHHHHHHHHHHHhhc---CCcEEEeCCC---CCCCHHHHHHHHH
Q 012478 101 SAKLVEKSGFSFCFTSGFS-I-SAARLALPDTGFISYGEMVDQGQLITQAV---SIPVIGDGDN---GYGNAMNVKRTVK 172 (462)
Q Consensus 101 SArl~e~aGfdaI~vSG~a-v-Sas~lG~PD~g~vsl~Eml~~~~~I~ra~---~iPVIaD~Dt---GyG~~~nv~rtVk 172 (462)
+++.++++|+.+|-+=+-. . -+.++|.+...+++.+|+++.++.++++. +.-|++=-|. +. +...+.+-.+
T Consensus 99 ~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~-g~~~ai~Ra~ 177 (295)
T 1s2w_A 99 LVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGW-GLDEALKRAE 177 (295)
T ss_dssp HHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTC-CHHHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccc-cHHHHHHHHH
Confidence 4556678999999887421 0 11234445567899999999999998765 3456664444 33 3566777778
Q ss_pred HHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhc
Q 012478 173 GYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADA 252 (462)
Q Consensus 173 ~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eA 252 (462)
.|++|||++|.+|-.. |..+.+.+|...+... .+.+++ =+. ..... ...+.++
T Consensus 178 ay~eAGAd~i~~e~~~--------------~~~~~~~~i~~~~~~~----~P~i~~-~~~-~~~~~-------~~eL~~l 230 (295)
T 1s2w_A 178 AYRNAGADAILMHSKK--------------ADPSDIEAFMKAWNNQ----GPVVIV-PTK-YYKTP-------TDHFRDM 230 (295)
T ss_dssp HHHHTTCSEEEECCCS--------------SSSHHHHHHHHHHTTC----SCEEEC-CST-TTTSC-------HHHHHHH
T ss_pred HHHHcCCCEEEEcCCC--------------CCHHHHHHHHHHcCCC----CCEEEe-CCC-CCCCC-------HHHHHHc
Confidence 9999999999999532 1123445554443211 233332 121 11112 5578889
Q ss_pred CCcEEEecC
Q 012478 253 GADVLFIDA 261 (462)
Q Consensus 253 GAD~Ifie~ 261 (462)
|...|+...
T Consensus 231 Gv~~v~~~~ 239 (295)
T 1s2w_A 231 GVSMVIWAN 239 (295)
T ss_dssp TCCEEEECS
T ss_pred CCcEEEECh
Confidence 999998764
No 488
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=81.39 E-value=5.6 Score=39.25 Aligned_cols=129 Identities=17% Similarity=0.185 Sum_probs=82.0
Q ss_pred HHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhc---CCcEEEeCCCCCCCHHHHHHHHHHHHHh
Q 012478 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV---SIPVIGDGDNGYGNAMNVKRTVKGYIKA 177 (462)
Q Consensus 101 SArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~---~iPVIaD~DtGyG~~~nv~rtVk~l~~A 177 (462)
+++.++++|+.+|-+=+-.. --..|+-+..+++.+||+..++.++++. +.-|++=-|..-.+...+.+-.+.|++|
T Consensus 102 ~v~~l~~aGa~gv~iED~~~-pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~~ai~Ra~ay~eA 180 (287)
T 3b8i_A 102 TVVELERAGIAALTIEDTLL-PAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQRTLAYQEA 180 (287)
T ss_dssp HHHHHHHHTCSEEEEECBCC-SCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCeEEEEcCCCC-ccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEEechhhhcCHHHHHHHHHHHHHc
Confidence 45556679999998875221 1123554445999999999999998874 3456665444212345667777899999
Q ss_pred CccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEE--EecchhhcccHHHHHHHHHHhHhcCCc
Q 012478 178 GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV--ARTDSRQALSLEESLRRSRAFADAGAD 255 (462)
Q Consensus 178 GaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIi--ARTDA~~~~gldeAI~RakAy~eAGAD 255 (462)
||++|.+|.- |..+.+.+|...+ ..+.+|+ ++|.... ...+.++|..
T Consensus 181 GAd~i~~e~~---------------~~~~~~~~i~~~~------~~P~ii~~~g~~~~~~----------~~eL~~lGv~ 229 (287)
T 3b8i_A 181 GADGICLVGV---------------RDFAHLEAIAEHL------HIPLMLVTYGNPQLRD----------DARLARLGVR 229 (287)
T ss_dssp TCSEEEEECC---------------CSHHHHHHHHTTC------CSCEEEECTTCGGGCC----------HHHHHHTTEE
T ss_pred CCCEEEecCC---------------CCHHHHHHHHHhC------CCCEEEeCCCCCCCCC----------HHHHHHcCCc
Confidence 9999999962 1123444543322 2344433 3444322 4567889999
Q ss_pred EEEecC
Q 012478 256 VLFIDA 261 (462)
Q Consensus 256 ~Ifie~ 261 (462)
.|..+.
T Consensus 230 ~v~~~~ 235 (287)
T 3b8i_A 230 VVVNGH 235 (287)
T ss_dssp EEECCC
T ss_pred EEEECh
Confidence 887754
No 489
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=81.36 E-value=7.6 Score=37.80 Aligned_cols=170 Identities=16% Similarity=0.141 Sum_probs=105.7
Q ss_pred HhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhc--CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012478 107 KSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV--SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 107 ~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~--~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~I 184 (462)
+.|.+.+++.|.. | ..-.+|.+|..+.++.+++.+ .+|||+= .|-.+..++.+.++...++||+|+.+
T Consensus 34 ~~Gv~gl~v~Gtt------G--E~~~Lt~~Er~~v~~~~~~~~~grvpviaG--vg~~~t~~ai~la~~a~~~Gadavlv 103 (292)
T 3daq_A 34 ENNAQAIIVNGTT------A--ESPTLTTDEKELILKTVIDLVDKRVPVIAG--TGTNDTEKSIQASIQAKALGADAIML 103 (292)
T ss_dssp HTTCCEEEESSGG------G--TGGGSCHHHHHHHHHHHHHHHTTSSCEEEE--CCCSCHHHHHHHHHHHHHHTCSEEEE
T ss_pred HcCCCEEEECccc------c--ccccCCHHHHHHHHHHHHHHhCCCCcEEEe--CCcccHHHHHHHHHHHHHcCCCEEEE
Confidence 5799999988622 1 123478999888888877765 4999983 45446788899999999999999988
Q ss_pred CCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEE---ecchhhcccHHHHHHHHHHhHhcCCcEEEe-c
Q 012478 185 EDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA---RTDSRQALSLEESLRRSRAFADAGADVLFI-D 260 (462)
Q Consensus 185 EDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiA---RTDA~~~~gldeAI~RakAy~eAGAD~Ifi-e 260 (462)
=--.+ . + .+.+++.+-.+++.++. +-++++-- ||-.. .. -+.+.|.. +-. .++-+ +
T Consensus 104 ~~P~y-------~-~--~~~~~l~~~f~~ia~a~---~lPiilYn~P~~tg~~--l~-~~~~~~La---~~p-nivgiK~ 163 (292)
T 3daq_A 104 ITPYY-------N-K--TNQRGLVKHFEAIADAV---KLPVVLYNVPSRTNMT--IE-PETVEILS---QHP-YIVALKD 163 (292)
T ss_dssp ECCCS-------S-C--CCHHHHHHHHHHHHHHH---CSCEEEEECHHHHSCC--CC-HHHHHHHH---TST-TEEEEEE
T ss_pred CCCCC-------C-C--CCHHHHHHHHHHHHHhC---CCCEEEEecccccCCC--CC-HHHHHHHh---cCC-CEEEEEe
Confidence 32211 1 1 25678888888777765 24555542 44321 12 34455543 222 34444 5
Q ss_pred CCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccch
Q 012478 261 ALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLS 312 (462)
Q Consensus 261 ~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ 312 (462)
+..+.+.+.++.+..+. .-+.++.+. .. ..-..-.+|.+-++-+..
T Consensus 164 ssgd~~~~~~~~~~~~~--~~f~v~~G~---d~-~~~~~l~~G~~G~is~~~ 209 (292)
T 3daq_A 164 ATNDFEYLEEVKKRIDT--NSFALYSGN---DD-NVVEYYQRGGQGVISVIA 209 (292)
T ss_dssp CCCCHHHHHHHHTTSCT--TTSEEEESC---GG-GHHHHHHTTCCEEEESGG
T ss_pred CCCCHHHHHHHHHHCCC--CCEEEEECC---HH-HHHHHHhcCCCEEEeCHH
Confidence 55677888888877652 013344431 11 234455788877765544
No 490
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=81.17 E-value=34 Score=35.87 Aligned_cols=144 Identities=13% Similarity=0.045 Sum_probs=84.8
Q ss_pred HHHHHHHhCCcEEEeccHHHHhhhccCCC-CCCCCHHHHHHHHHHHHhh-----cCCcEEEeCCC---------------
Q 012478 101 SAKLVEKSGFSFCFTSGFSISAARLALPD-TGFISYGEMVDQGQLITQA-----VSIPVIGDGDN--------------- 159 (462)
Q Consensus 101 SArl~e~aGfdaI~vSG~avSas~lG~PD-~g~vsl~Eml~~~~~I~ra-----~~iPVIaD~Dt--------------- 159 (462)
+.+.++++|+-+|-+=--....-..|+.+ ..+++.+|++..++.++.+ .+.-|+|=.|.
T Consensus 172 ~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~d~~IiARTDa~~a~l~~s~~d~~d~ 251 (439)
T 3i4e_A 172 LMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMGTPTVLVARTDAEAADLITSDIDDNDK 251 (439)
T ss_dssp HHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCCTTTG
T ss_pred HHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCcccccccccccccccc
Confidence 34667889999888873111111235543 4689999999998888644 24556665554
Q ss_pred ----------CC----CCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCe
Q 012478 160 ----------GY----GNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDI 225 (462)
Q Consensus 160 ----------Gy----G~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~ 225 (462)
|| ++...+.+-.+.|.+ ||++|.+|-.. .+.+ .+.++..++.... ...+
T Consensus 252 ~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~-GAD~if~E~~~-------------~~~e-ei~~f~~~v~~~~--P~~~ 314 (439)
T 3i4e_A 252 PYLTGERTVEGFFRTKPGLEQAISRGLAYAP-YADLIWCETGK-------------PDLE-YAKKFAEAIHKQF--PGKL 314 (439)
T ss_dssp GGEEEEECTTSCEEECCSHHHHHHHHHHHTT-TCSEEEECCSS-------------CCHH-HHHHHHHHHHHHS--TTCE
T ss_pred hhhcccCcccccccccCCHHHHHHHHHHHHh-hCCEEEecCCC-------------CCHH-HHHHHHHHhcccC--CceE
Confidence 32 345444444457887 99999998752 1233 3345544444321 2234
Q ss_pred EEEEecchhh--cccHHHHHHH-HHHhHhcCCcEEEecC
Q 012478 226 VIVARTDSRQ--ALSLEESLRR-SRAFADAGADVLFIDA 261 (462)
Q Consensus 226 vIiARTDA~~--~~gldeAI~R-akAy~eAGAD~Ifie~ 261 (462)
++...+-.+. ..--++.|+. ...+.++|...+++..
T Consensus 315 l~~~~sPsfnw~~~~~~~~~~~f~~eL~~lGv~~v~~~l 353 (439)
T 3i4e_A 315 LSYNCSPSFNWKKNLDDATIAKFQKELGAMGYKFQFITL 353 (439)
T ss_dssp EEEECCSSSCHHHHSCHHHHHTHHHHHHHHTCCEEEETT
T ss_pred EeeCCCCCCcCcccCCHHHHHHHHHHHHHcCCeEEEeCh
Confidence 4444454331 0111444555 6778889999999864
No 491
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=81.15 E-value=2 Score=40.06 Aligned_cols=70 Identities=17% Similarity=0.216 Sum_probs=47.4
Q ss_pred HHHHHHHHhHhcCCcEEEecCCC--------CHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccch
Q 012478 241 ESLRRSRAFADAGADVLFIDALA--------SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLS 312 (462)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~~~--------s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ 312 (462)
+.++-+++|.++|||.|.+..+. ..+.++++++.++ +|+.+| ++-...-..+++.+.|+..|+++..
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~-ipvi~~----ggI~~~~~~~~~~~~Gad~V~lg~~ 105 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQID-IPFTVG----GGIHDFETASELILRGADKVSINTA 105 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTCC-SCEEEE----SSCCSHHHHHHHHHTTCSEEEESHH
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhCC-CCEEEe----CCCCCHHHHHHHHHcCCCEEEEChH
Confidence 45677899999999998764432 2355677777654 676654 2222112367788899999999887
Q ss_pred HHH
Q 012478 313 LIG 315 (462)
Q Consensus 313 ll~ 315 (462)
++.
T Consensus 106 ~l~ 108 (253)
T 1thf_D 106 AVE 108 (253)
T ss_dssp HHH
T ss_pred HHh
Confidence 765
No 492
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=81.10 E-value=9 Score=38.90 Aligned_cols=119 Identities=14% Similarity=0.201 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHH
Q 012478 164 AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESL 243 (462)
Q Consensus 164 ~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI 243 (462)
++.+.+.++.+.+.|...+||-= |. ++-+++|+|++++. |+++.|. .|+......++ +
T Consensus 164 ~e~~~~~a~~~~~~G~~~iKlKv-------~~---------~~d~~~v~avR~a~---G~~~~L~--vDaN~~w~~~~-~ 221 (400)
T 3mwc_A 164 IETLIHQVEESLQEGYRRIKIKI-------KP---------GWDVEPLQETRRAV---GDHFPLW--TDANSSFELDQ-W 221 (400)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEEC-------BT---------TBSHHHHHHHHHHH---CTTSCEE--EECTTCCCGGG-H
T ss_pred HHHHHHHHHHHHHcCCCEEEEEe-------Cc---------chHHHHHHHHHHhc---CCCCEEE--EeCCCCCCHHH-H
Confidence 78888889999999999999832 10 12266888887764 5565443 37777777888 8
Q ss_pred HHHHHhHhcCCcEEEecCC---CCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHH---HHhcC-CCEEeccchHH
Q 012478 244 RRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELG-FKLVAYPLSLI 314 (462)
Q Consensus 244 ~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~e---L~~lG-v~~V~yp~~ll 314 (462)
+.++++.+.|.+ |+|-+ .+.+.++++.+..+ +|+.++ .. ..+..+ +-+.| ++.|..-..-.
T Consensus 222 ~~~~~l~~~~i~--~iEqP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~~~~~~~d~v~~k~~~~ 289 (400)
T 3mwc_A 222 ETFKAMDAAKCL--FHEQPLHYEALLDLKELGERIE-TPICLD-----ES--LISSRVAEFVAKLGISNIWNIKIQRV 289 (400)
T ss_dssp HHHHHHGGGCCS--CEESCSCTTCHHHHHHHHHHSS-SCEEES-----TT--CCSHHHHHHHHHTTCCSEEEECHHHH
T ss_pred HHHHHHHhcCCC--EEeCCCChhhHHHHHHHHhhCC-CCEEEe-----CC--cCCHHHHHHHHhcCCCCEEEEcchhh
Confidence 999999998765 45644 35678888888875 676543 11 234444 44446 66665544433
No 493
>3qfw_A Ribulose-1,5-bisphosphate carboxylase/oxygenase L subunit; structural genomics, PSI-2, protein structure initiative; 1.79A {Rhodopseudomonas palustris}
Probab=81.08 E-value=41 Score=34.47 Aligned_cols=130 Identities=12% Similarity=0.111 Sum_probs=82.4
Q ss_pred HHHHHHHhhcCCcEEEeCCCCCC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHH-HHHHH
Q 012478 140 DQGQLITQAVSIPVIGDGDNGYG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIK-AAVDA 217 (462)
Q Consensus 140 ~~~~~I~ra~~iPVIaD~DtGyG-~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~-AA~~A 217 (462)
+-.|++....+-|++.=+=---| ++.+..+.+.++...|++=||= |.. ...++..|.+|-+..+. |+.+|
T Consensus 120 ~g~R~~l~~~~RPllgtiiKPlGLs~~~~a~~~ye~~~GGlDfiKD-DE~-------l~~qpf~p~~eR~~~~~eai~ra 191 (378)
T 3qfw_A 120 AGIRTLTGAQSRALTASALKPQGLSPAALASIAHQLALGGVDLIKD-DHG-------LADQAFSPFAERAAAVGKAVREA 191 (378)
T ss_dssp HHHHHHHTCSSSCEEEEEECCTTSCHHHHHHHHHHHHHTTCSEEEE-CTT-------CSSCTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCceeeeeccCCcCCHHHHHHHHHHHHhcCCCcccC-CcC-------cCCCCcccHHHHHHHHHHHHHHH
Confidence 34566777778898765433245 6789999999999999998873 432 23345666665333332 23344
Q ss_pred HHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCCC-CHHHHHHHHHhCCCCcee
Q 012478 218 RKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALA-SKEEMKAFCEISPLVPKM 281 (462)
Q Consensus 218 r~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~~-s~eei~~i~~~v~~vP~~ 281 (462)
.++.|.--+-...+- ...+|.++|++...++|+.++++.... -...+..+++..|.+|+.
T Consensus 192 ~~eTGe~k~y~~NiT----a~~~em~~ra~~a~e~G~~~~mvd~~~~G~~a~~~l~r~~p~~~lh 252 (378)
T 3qfw_A 192 NAARGGRTLYAPNIS----GTLDDMRRQLGVIRDEGIGAVLVAPMIVGVSNFHAIVKEAAGLVVV 252 (378)
T ss_dssp HHHHTCCCEEECBCC----SSHHHHHHHHHHHHHHTCCEEEECHHHHCHHHHHHHHTTCTTCEEE
T ss_pred HHhhCCccEEEeecC----CCHHHHHHHHHHHHHcCCCEEEEeccccCHHHHHHHHHhCCCCEEE
Confidence 444552222122211 147899999999999999999997542 345677777776555543
No 494
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=80.64 E-value=8.1 Score=38.03 Aligned_cols=192 Identities=15% Similarity=0.122 Sum_probs=110.7
Q ss_pred HHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhc-CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012478 106 EKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV-SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (462)
Q Consensus 106 e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~-~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~I 184 (462)
-+.|.+.+++.|.. | ..-.+|.+|-.+.++.+++.+ .+|||+= .|-.+..++.+.++...++||+|+.+
T Consensus 39 i~~Gv~Gl~v~GtT------G--E~~~Lt~~Er~~v~~~~v~~~grvpViaG--vg~~~t~~ai~la~~A~~~Gadavlv 108 (313)
T 3dz1_A 39 AEVGCEGVTVLGIL------G--EAPKLDAAEAEAVATRFIKRAKSMQVIVG--VSAPGFAAMRRLARLSMDAGAAGVMI 108 (313)
T ss_dssp HHTTCSEEEESTGG------G--TGGGSCHHHHHHHHHHHHHHCTTSEEEEE--CCCSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHCCCCEEEeCccC------c--ChhhCCHHHHHHHHHHHHHHcCCCcEEEe--cCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 35799999988622 2 123478999888888877765 5999993 44346778889999999999999988
Q ss_pred CCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEE---EecchhhcccHHHHHHHHHHhHhcCCcEEEe--
Q 012478 185 EDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV---ARTDSRQALSLEESLRRSRAFADAGADVLFI-- 259 (462)
Q Consensus 185 EDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIi---ARTDA~~~~gldeAI~RakAy~eAGAD~Ifi-- 259 (462)
..| + .+ .+.+++.+-.+++.++... +-++++- +||-.. .. -|.+.|... +. -.++-|
T Consensus 109 ---~~P----~--~~--~s~~~l~~~f~~va~a~~~-~lPiilYn~P~~tg~~--l~-~~~~~~La~--~~-pnIvgiKd 170 (313)
T 3dz1_A 109 ---APP----P--SL--RTDEQITTYFRQATEAIGD-DVPWVLQDYPLTLSVV--MT-PKVIRQIVM--DS-ASCVMLKH 170 (313)
T ss_dssp ---CCC----T--TC--CSHHHHHHHHHHHHHHHCT-TSCEEEEECHHHHCCC--CC-HHHHHHHHH--HC-SSEEEEEE
T ss_pred ---CCC----C--CC--CCHHHHHHHHHHHHHhCCC-CCcEEEEeCccccCcC--CC-HHHHHHHHH--hC-CCEEEEEc
Confidence 322 1 11 2678888888888776520 0244443 244321 12 345555431 11 124444
Q ss_pred cCCCCHHHHHHHHHhCCC-CceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHHHHHHHHHHHHHHHHHcCC
Q 012478 260 DALASKEEMKAFCEISPL-VPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVSVRAMQDALTAIKGGR 332 (462)
Q Consensus 260 e~~~s~eei~~i~~~v~~-vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll~aa~~Am~~~l~~l~~g~ 332 (462)
++..+.+.+.++.+..+. ...-+.++.+. ..+.....-.+|.+-++-++. .-+.+.+.++++++|.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~f~v~~G~---d~~~l~~~l~~G~~G~i~~~~----~P~~~~~l~~a~~~Gd 237 (313)
T 3dz1_A 171 EDWPGLEKITTLRGFQKDGSLRPLSILCGN---GGLFLDFEMERGADGAMTGYC----FPDMLVDVVKLSKAGQ 237 (313)
T ss_dssp CCSSCHHHHHHHHHHHHHTSSCCCEEEECG---GGTTHHHHHHHTCCEEEECCS----CHHHHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHhcCccCCCCeEEEeCC---cHHHHHHHHHCCCcEEEeCcc----cHHHHHHHHHHHHCCC
Confidence 245566777777765420 00113344431 123344434567776665543 2334445555566664
No 495
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=80.59 E-value=8.1 Score=38.15 Aligned_cols=170 Identities=16% Similarity=0.170 Sum_probs=105.1
Q ss_pred HHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhc--CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEE
Q 012478 106 EKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV--SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGII 183 (462)
Q Consensus 106 e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~--~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~ 183 (462)
-+.|.+.+++.|.. | ..-.+|.+|-.+.++.+++.+ .+|||+ -.|--+..++.+.++...++||+|+.
T Consensus 54 i~~Gv~Gl~v~GtT------G--E~~~Ls~~Er~~v~~~~v~~~~grvpVia--Gvg~~st~eai~la~~A~~~Gadavl 123 (314)
T 3qze_A 54 LQEGTNAIVAVGTT------G--ESATLDVEEHIQVIRRVVDQVKGRIPVIA--GTGANSTREAVALTEAAKSGGADACL 123 (314)
T ss_dssp HHHTCCEEEESSGG------G--TGGGCCHHHHHHHHHHHHHHHTTSSCEEE--ECCCSSHHHHHHHHHHHHHTTCSEEE
T ss_pred HHcCCCEEEECccc------c--ChhhCCHHHHHHHHHHHHHHhCCCCcEEE--eCCCcCHHHHHHHHHHHHHcCCCEEE
Confidence 35799999998622 1 123488999888888877765 399999 23433577889999999999999998
Q ss_pred eCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEE---EecchhhcccHHHHHHHHHHhHhcCCcEEEe-
Q 012478 184 LEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV---ARTDSRQALSLEESLRRSRAFADAGADVLFI- 259 (462)
Q Consensus 184 IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIi---ARTDA~~~~gldeAI~RakAy~eAGAD~Ifi- 259 (462)
+=--.+ . + .+.+++.+-.+++.++. +-++++- +||-.. .. -|.+.|.. +-. .++-+
T Consensus 124 v~~P~y-------~-~--~s~~~l~~~f~~va~a~---~lPiilYn~P~~tg~~--l~-~~~~~~La---~~p-nIvgiK 183 (314)
T 3qze_A 124 LVTPYY-------N-K--PTQEGMYQHFRHIAEAV---AIPQILYNVPGRTSCD--ML-PETVERLS---KVP-NIIGIK 183 (314)
T ss_dssp EECCCS-------S-C--CCHHHHHHHHHHHHHHS---CSCEEEEECHHHHSCC--CC-HHHHHHHH---TST-TEEEEE
T ss_pred EcCCCC-------C-C--CCHHHHHHHHHHHHHhc---CCCEEEEeCccccCCC--CC-HHHHHHHh---cCC-CEEEEE
Confidence 832211 1 1 25678888888777664 2355554 244221 12 34455543 222 34444
Q ss_pred cCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccch
Q 012478 260 DALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLS 312 (462)
Q Consensus 260 e~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ 312 (462)
++..+.+.+.++.+..+. . +.++.+.. -..-+.-.+|.+-++-+..
T Consensus 184 dssgd~~~~~~~~~~~~~--~-f~v~~G~d----~~~l~~l~~Ga~G~is~~a 229 (314)
T 3qze_A 184 EATGDLQRAKEVIERVGK--D-FLVYSGDD----ATAVELMLLGGKGNISVTA 229 (314)
T ss_dssp ECSCCHHHHHHHHHHSCT--T-SEEEESCG----GGHHHHHHTTCCEEEESGG
T ss_pred cCCCCHHHHHHHHHHcCC--C-eEEEecCh----HHHHHHHHCCCCEEEecHH
Confidence 555677888888877642 1 33444311 1244556788877765443
No 496
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=80.52 E-value=4.1 Score=39.89 Aligned_cols=86 Identities=12% Similarity=0.174 Sum_probs=58.4
Q ss_pred CeEEEEecchhh------cccHHHHHHHHHHhHhcCCcEEEecC----C-CCHHHHHHHHHhCCCCceeeeeeecCCCCC
Q 012478 224 DIVIVARTDSRQ------ALSLEESLRRSRAFADAGADVLFIDA----L-ASKEEMKAFCEISPLVPKMANMLEGGGKTP 292 (462)
Q Consensus 224 d~vIiARTDA~~------~~gldeAI~RakAy~eAGAD~Ifie~----~-~s~eei~~i~~~v~~vP~~~N~l~~~g~tP 292 (462)
.+-|||-..-.. ...+ +..+-|++|+++||++|-+-. . .+.+.++++.+.+. +|++.. ..-.+
T Consensus 58 ~~~vIaE~KraSPSkG~i~~~~-dp~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v~-lPVl~K----dfi~d 131 (272)
T 3tsm_A 58 QFALIAEIKKASPSKGLIRPDF-DPPALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQACS-LPALRK----DFLFD 131 (272)
T ss_dssp CCEEEEEECSEETTTEESCSSC-CHHHHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHTSS-SCEEEE----SCCCS
T ss_pred CceEEEEeccCCCCCCccCCCC-CHHHHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHhcC-CCEEEC----CccCC
Confidence 466777654321 1111 346679999999999997621 1 47788999988775 676532 22233
Q ss_pred CCCHHHHHhcCCCEEeccchHHH
Q 012478 293 ILNPLELEELGFKLVAYPLSLIG 315 (462)
Q Consensus 293 ~ls~~eL~~lGv~~V~yp~~ll~ 315 (462)
.+...++.++|...|+.....+.
T Consensus 132 ~~qi~ea~~~GAD~VlLi~a~L~ 154 (272)
T 3tsm_A 132 PYQVYEARSWGADCILIIMASVD 154 (272)
T ss_dssp THHHHHHHHTTCSEEEEETTTSC
T ss_pred HHHHHHHHHcCCCEEEEcccccC
Confidence 45688999999999999887663
No 497
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=80.47 E-value=17 Score=35.57 Aligned_cols=172 Identities=16% Similarity=0.089 Sum_probs=93.6
Q ss_pred eecccccCCCccccccCchHH---HHHHHHh--CCCceEecccC--ChH----HHHHHHHhCCcEEEeccHHHHhhhccC
Q 012478 59 NRTRVYRKNSTGVEACLSPAK---SLRQILE--LPGVHQGPACF--DAL----SAKLVEKSGFSFCFTSGFSISAARLAL 127 (462)
Q Consensus 59 ~~~R~y~rgs~~~~~a~~~a~---~LR~ll~--~~~~iv~p~ay--Dal----SArl~e~aGfdaI~vSG~avSas~lG~ 127 (462)
|+.=.+.-||...-+..+..+ -++...+ .++.-++.|+- +-- -|+.++++|+|++++..
T Consensus 38 Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~---------- 107 (300)
T 3eb2_A 38 GVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAIL---------- 107 (300)
T ss_dssp TCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEE----------
T ss_pred CCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcC----------
Confidence 333345566666554333322 2333232 34433344443 322 25677788999998753
Q ss_pred CCCCCCCHHHHHHHHHHHHhhcCCcEE-EeCCCCCCCHHHHHHHHHHHHH-hCccEEEeCCCCCCCCCCCCCCCcccCHH
Q 012478 128 PDTGFISYGEMVDQGQLITQAVSIPVI-GDGDNGYGNAMNVKRTVKGYIK-AGFAGIILEDQVSPKGCGHTRGRKVVSRE 205 (462)
Q Consensus 128 PD~g~vsl~Eml~~~~~I~ra~~iPVI-aD~DtGyG~~~nv~rtVk~l~~-AGaaGI~IEDq~~PKrCGH~~gk~Lvp~e 205 (462)
|-....+.++++++-+.|++++++||+ =+.|.-.|.... .+++.++.+ -.+.|||-... .
T Consensus 108 P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~-~~~~~~La~~pnIvgiKdssg-------d---------- 169 (300)
T 3eb2_A 108 EAYFPLKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLT-LDVIARLAEHPRIRYIKDAST-------N---------- 169 (300)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCC-HHHHHHHHTSTTEEEEEECSS-------B----------
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCEEEEECccccCCCCC-HHHHHHHHcCCCEEEEEcCCC-------C----------
Confidence 112224789999999999999999976 577753332111 123334433 46888886432 1
Q ss_pred HHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCcEEEecCC-CCHHHHHHHHHh
Q 012478 206 EAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEI 274 (462)
Q Consensus 206 e~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gldeAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~ 274 (462)
..++...++.. +++|.|..=.|.. ......+|++.++--.- --++.+.++.+.
T Consensus 170 --~~~~~~~~~~~---~~~f~v~~G~d~~-----------~~~~l~~G~~G~is~~an~~P~~~~~l~~a 223 (300)
T 3eb2_A 170 --TGRLLSIINRC---GDALQVFSASAHI-----------PAAVMLIGGVGWMAGPACIAPRQSVALYEL 223 (300)
T ss_dssp --HHHHHHHHHHH---GGGSEEEECTTSC-----------HHHHHHTTCCEEEEGGGGTCHHHHHHHHHH
T ss_pred --HHHHHHHHHHc---CCCeEEEeCcHHH-----------HHHHHhCCCCEEEeChhhhhHHHHHHHHHH
Confidence 12333333332 2478777655543 22344589998764321 234666666654
No 498
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=80.45 E-value=4.8 Score=38.79 Aligned_cols=179 Identities=13% Similarity=0.136 Sum_probs=95.4
Q ss_pred ceEecccCChHHH------HHHHHhCCcEEEeccHHHHhhhcc--CCCCCCCCHHHHHHHHHHHHhhc-CCcEEEeCCCC
Q 012478 90 VHQGPACFDALSA------KLVEKSGFSFCFTSGFSISAARLA--LPDTGFISYGEMVDQGQLITQAV-SIPVIGDGDNG 160 (462)
Q Consensus 90 ~iv~p~ayDalSA------rl~e~aGfdaI~vSG~avSas~lG--~PD~g~vsl~Eml~~~~~I~ra~-~iPVIaD~DtG 160 (462)
..+.|-...+-.+ +.++++|.|.+.+== +-| .|.. ++. ...++.|.+.+ ++|+.+++=
T Consensus 28 ~~i~pSilsaD~~~L~~~i~~l~~~G~d~lHvDV------mDg~FVpni---t~G--~~~v~~lr~~~p~~~ldvHLm-- 94 (246)
T 3inp_A 28 IQINPSILSADLARLGDDVKAVLAAGADNIHFDV------MDNHYVPNL---TFG--PMVLKALRDYGITAGMDVHLM-- 94 (246)
T ss_dssp CEEEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEE------EBSSSSSCB---CCC--HHHHHHHHHHTCCSCEEEEEE--
T ss_pred CeeehhhhcCChhhHHHHHHHHHHcCCCEEEEEe------cCCCcCcch---hcC--HHHHHHHHHhCCCCeEEEEEe--
Confidence 4566654433332 456677888777631 001 2332 222 13456666666 788866543
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchhhcccHH
Q 012478 161 YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (462)
Q Consensus 161 yG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~~~~gld 240 (462)
.-++. +-++.+.++||+.|.+-... |-| ..+.+ +++++...+ ..+.++--|..
T Consensus 95 v~~p~---~~i~~~~~aGAd~itvH~Ea----~~~--------~~~~i---~~ir~~G~k--~Gvalnp~Tp~------- 147 (246)
T 3inp_A 95 VKPVD---ALIESFAKAGATSIVFHPEA----SEH--------IDRSL---QLIKSFGIQ--AGLALNPATGI------- 147 (246)
T ss_dssp CSSCH---HHHHHHHHHTCSEEEECGGG----CSC--------HHHHH---HHHHTTTSE--EEEEECTTCCS-------
T ss_pred eCCHH---HHHHHHHHcCCCEEEEcccc----chh--------HHHHH---HHHHHcCCe--EEEEecCCCCH-------
Confidence 44553 35788999999999985442 112 23333 333333211 12333322332
Q ss_pred HHHHHHHHhHhcCCcEEEecCC-----------CCHHHHHHHHHhCC--CCceeeeeeecCCCCCCCCHHHHHhcCCCEE
Q 012478 241 ESLRRSRAFADAGADVLFIDAL-----------ASKEEMKAFCEISP--LVPKMANMLEGGGKTPILNPLELEELGFKLV 307 (462)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~~-----------~s~eei~~i~~~v~--~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V 307 (462)
++.+.+.+ +.|.|++-++ .+.+.++++.+..+ +...++- +. ||-++ -+..++.++|++.+
T Consensus 148 ---e~l~~~l~-~vD~VlvMsV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~-VD-GGI~~-~ti~~~~~aGAD~~ 220 (246)
T 3inp_A 148 ---DCLKYVES-NIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLE-ID-GGVNP-YNIAEIAVCGVNAF 220 (246)
T ss_dssp ---GGGTTTGG-GCSEEEEECSCTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEE-EE-SSCCT-TTHHHHHTTTCCEE
T ss_pred ---HHHHHHHh-cCCEEEEeeecCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEE-EE-CCcCH-HHHHHHHHcCCCEE
Confidence 24445554 5898876332 12345555554321 1112222 23 45554 47899999999999
Q ss_pred eccchHHH
Q 012478 308 AYPLSLIG 315 (462)
Q Consensus 308 ~yp~~ll~ 315 (462)
+.|..++.
T Consensus 221 V~GSaIf~ 228 (246)
T 3inp_A 221 VAGSAIFN 228 (246)
T ss_dssp EESHHHHT
T ss_pred EEehHHhC
Confidence 99987775
No 499
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=80.42 E-value=39 Score=31.78 Aligned_cols=149 Identities=17% Similarity=0.150 Sum_probs=82.8
Q ss_pred HHHHhhcCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhC
Q 012478 143 QLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESG 222 (462)
Q Consensus 143 ~~I~ra~~iPVIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g 222 (462)
+.+.+. +.+|+.|.=.+ -.+..+.+.++.+.++||+.|.+--.. | .+-+..-++++++.. ..|
T Consensus 49 ~~lr~~-~~~v~lD~kl~-Dip~t~~~~~~~~~~~Gad~vTvH~~~---------g-----~~~l~~~~~~~~~~~-~~G 111 (246)
T 2yyu_A 49 AFLKEQ-GHAVFLDLKLH-DIPNTVKQAMKGLARVGADLVNVHAAG---------G-----RRMMEAAIEGLDAGT-PSG 111 (246)
T ss_dssp HHHHHT-TCEEEEEEEEC-SCHHHHHHHHHHHHHTTCSEEEEEGGG---------C-----HHHHHHHHHHHHHHS-CSS
T ss_pred HHHHHC-CCeEEEEeecc-cchHHHHHHHHHHHhcCCCEEEEECCC---------C-----HHHHHHHHHHHHhhc-ccC
Confidence 444332 67899999887 446667778999999999999883321 1 111112222222210 023
Q ss_pred --CC-eE-EEEecch----h-hc----cc-HHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecC
Q 012478 223 --SD-IV-IVARTDS----R-QA----LS-LEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGG 288 (462)
Q Consensus 223 --~d-~v-IiARTDA----~-~~----~g-ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~ 288 (462)
.. .+ |+..|.- . .. .. .|..+..++...+.|.+.++... .+++++.+..+. .++-+. |
T Consensus 112 ~~~~~~lav~~~Ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~~----~ei~~lr~~~~~--~~i~V~--g 183 (246)
T 2yyu_A 112 RMRPRCIAVTQLTSTDERMLHEELWISRPLVETVAHYAALAKESGLDGVVCSA----NEAAFIKERCGA--SFLAVT--P 183 (246)
T ss_dssp SCCCEEEEESSCTTCCHHHHHHTSCCCSCHHHHHHHHHHHHHHHTCCEEECCH----HHHHHHHHHHCT--TSEEEE--C
T ss_pred CcCCCEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCEEEeCH----HHHHHHHHhcCC--CCEEEe--C
Confidence 12 22 3334441 1 11 11 24455555555789999954333 236666555432 222222 3
Q ss_pred CCCCC----------CCHHHHHhcCCCEEeccchHHHH
Q 012478 289 GKTPI----------LNPLELEELGFKLVAYPLSLIGV 316 (462)
Q Consensus 289 g~tP~----------ls~~eL~~lGv~~V~yp~~ll~a 316 (462)
|-.+. .+++++.+.|...++.|...+.+
T Consensus 184 GI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a 221 (246)
T 2yyu_A 184 GIRFADDAAHDQVRVVTPRKARALGSDYIVIGRSLTRA 221 (246)
T ss_dssp CCCCCC-------CCCCHHHHHHHTCSEEEECHHHHTS
T ss_pred CcCCCCCCcccccccCCHHHHHHcCCCEEEECHhhcCC
Confidence 43332 27899999999999999887764
No 500
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=80.39 E-value=2.4 Score=39.28 Aligned_cols=69 Identities=10% Similarity=0.023 Sum_probs=49.7
Q ss_pred HHHHHHHHhHhcCCcEEEecC--------CCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccch
Q 012478 241 ESLRRSRAFADAGADVLFIDA--------LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLS 312 (462)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~--------~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ 312 (462)
+.++.+++|.++|||.|.+.. ... +.++++++.+. +|+.++- +=.+|. ..+++.+.|+..|.++..
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~-ipv~v~g---gi~~~~-~~~~~l~~Gad~V~lg~~ 105 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKLD-VQVELSG---GIRDDE-SLAAALATGCARVNVGTA 105 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHCS-SEEEEES---SCCSHH-HHHHHHHTTCSEEEECHH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhcC-CcEEEEC---CCCCHH-HHHHHHHcCCCEEEECch
Confidence 456778899999999998853 223 78888888775 6766541 112232 477888999999999987
Q ss_pred HHH
Q 012478 313 LIG 315 (462)
Q Consensus 313 ll~ 315 (462)
++.
T Consensus 106 ~l~ 108 (244)
T 2y88_A 106 ALE 108 (244)
T ss_dssp HHH
T ss_pred Hhh
Confidence 665
Done!