Query 012479
Match_columns 462
No_of_seqs 535 out of 1955
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 10:14:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012479.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012479hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fr7_A Putative ketol-acid red 100.0 4E-103 1E-107 824.6 29.1 395 68-462 11-405 (525)
2 3ulk_A Ketol-acid reductoisome 100.0 8.5E-83 2.9E-87 660.8 25.0 347 71-462 2-369 (491)
3 1np3_A Ketol-acid reductoisome 100.0 1.3E-47 4.3E-52 387.9 24.6 310 106-443 12-329 (338)
4 3tri_A Pyrroline-5-carboxylate 100.0 9.1E-31 3.1E-35 258.0 19.3 220 112-365 4-234 (280)
5 3gt0_A Pyrroline-5-carboxylate 100.0 1.7E-28 5.9E-33 235.9 18.4 219 112-365 3-232 (247)
6 3ulk_A Ketol-acid reductoisome 99.9 7.7E-26 2.6E-30 235.2 2.7 130 302-442 354-485 (491)
7 2izz_A Pyrroline-5-carboxylate 99.9 3E-23 1E-27 207.6 21.4 218 112-364 23-255 (322)
8 2rcy_A Pyrroline carboxylate r 99.9 2.7E-21 9.1E-26 185.7 19.9 210 112-363 5-224 (262)
9 1yqg_A Pyrroline-5-carboxylate 99.9 3.9E-21 1.3E-25 184.6 19.6 215 112-364 1-223 (263)
10 2ahr_A Putative pyrroline carb 99.9 6.8E-21 2.3E-25 183.1 19.8 215 111-364 3-224 (259)
11 3ggo_A Prephenate dehydrogenas 99.8 1.6E-20 5.3E-25 188.2 13.4 209 112-343 34-249 (314)
12 3c24_A Putative oxidoreductase 99.8 4.3E-19 1.5E-23 173.6 22.5 213 111-352 11-241 (286)
13 2g5c_A Prephenate dehydrogenas 99.8 1.7E-20 5.8E-25 182.4 12.3 222 111-363 1-235 (281)
14 3b1f_A Putative prephenate deh 99.8 8.4E-20 2.9E-24 178.3 16.0 227 111-363 6-243 (290)
15 3ktd_A Prephenate dehydrogenas 99.8 4.1E-19 1.4E-23 180.6 18.3 204 112-343 9-228 (341)
16 2pv7_A T-protein [includes: ch 99.8 4.2E-18 1.4E-22 168.5 18.9 206 112-363 22-232 (298)
17 2f1k_A Prephenate dehydrogenas 99.8 5.9E-18 2E-22 164.1 19.3 222 112-363 1-231 (279)
18 3d1l_A Putative NADP oxidoredu 99.7 2.3E-15 7.8E-20 145.1 18.9 204 108-344 8-216 (266)
19 2i76_A Hypothetical protein; N 99.6 6.3E-16 2.2E-20 151.0 10.0 212 112-365 3-217 (276)
20 2dpo_A L-gulonate 3-dehydrogen 99.6 2.3E-14 7.8E-19 144.3 19.5 193 111-336 6-222 (319)
21 4e12_A Diketoreductase; oxidor 99.6 9.9E-14 3.4E-18 136.0 20.9 212 111-360 4-246 (283)
22 3dtt_A NADP oxidoreductase; st 99.6 1.6E-14 5.5E-19 138.8 14.0 162 103-287 12-206 (245)
23 3dfu_A Uncharacterized protein 99.6 2.4E-14 8.1E-19 138.6 13.6 153 112-324 7-160 (232)
24 2h78_A Hibadh, 3-hydroxyisobut 99.5 9.5E-14 3.3E-18 136.3 17.2 193 111-337 3-207 (302)
25 4huj_A Uncharacterized protein 99.5 4.1E-14 1.4E-18 133.9 13.3 154 111-287 23-192 (220)
26 3qsg_A NAD-binding phosphogluc 99.5 9.3E-14 3.2E-18 138.3 16.5 184 111-332 24-222 (312)
27 3pef_A 6-phosphogluconate dehy 99.5 1.4E-13 4.9E-18 134.5 16.5 199 112-337 2-205 (287)
28 1f0y_A HCDH, L-3-hydroxyacyl-C 99.5 4.5E-13 1.5E-17 132.0 20.1 217 111-362 15-262 (302)
29 3k6j_A Protein F01G10.3, confi 99.5 9.7E-13 3.3E-17 138.7 23.5 212 90-337 30-265 (460)
30 2ew2_A 2-dehydropantoate 2-red 99.5 3.5E-13 1.2E-17 131.2 17.9 156 111-287 3-177 (316)
31 3pdu_A 3-hydroxyisobutyrate de 99.5 1.7E-13 5.7E-18 134.0 15.6 201 111-340 1-208 (287)
32 3doj_A AT3G25530, dehydrogenas 99.5 5.2E-13 1.8E-17 132.5 18.1 200 111-337 21-225 (310)
33 3obb_A Probable 3-hydroxyisobu 99.5 4.2E-13 1.4E-17 133.8 17.4 194 111-336 3-206 (300)
34 1zej_A HBD-9, 3-hydroxyacyl-CO 99.5 2.4E-12 8.2E-17 128.3 21.7 204 112-361 13-232 (293)
35 3g0o_A 3-hydroxyisobutyrate de 99.5 5.2E-13 1.8E-17 131.8 16.6 198 112-338 8-214 (303)
36 2uyy_A N-PAC protein; long-cha 99.5 4E-13 1.4E-17 132.7 14.6 198 112-342 31-239 (316)
37 2gf2_A Hibadh, 3-hydroxyisobut 99.5 3.9E-13 1.3E-17 131.0 14.3 199 112-337 1-204 (296)
38 3mog_A Probable 3-hydroxybutyr 99.4 2.3E-12 8E-17 136.4 19.5 214 111-360 5-244 (483)
39 3qha_A Putative oxidoreductase 99.4 1.9E-12 6.7E-17 127.6 16.9 193 112-334 16-212 (296)
40 4gbj_A 6-phosphogluconate dehy 99.4 5.1E-13 1.8E-17 132.7 12.8 195 112-336 6-207 (297)
41 3l6d_A Putative oxidoreductase 99.4 4.5E-12 1.5E-16 125.7 19.2 199 112-342 10-215 (306)
42 1jay_A Coenzyme F420H2:NADP+ o 99.4 6.3E-13 2.2E-17 123.4 12.0 177 112-322 1-201 (212)
43 2zyd_A 6-phosphogluconate dehy 99.4 2E-12 6.8E-17 136.7 16.0 194 112-338 16-231 (480)
44 1vpd_A Tartronate semialdehyde 99.4 2.8E-12 9.7E-17 125.0 15.4 197 112-342 6-214 (299)
45 4ezb_A Uncharacterized conserv 99.4 4.5E-12 1.5E-16 126.7 16.6 187 112-332 25-224 (317)
46 2cvz_A Dehydrogenase, 3-hydrox 99.4 2.2E-12 7.6E-17 124.8 13.5 193 111-342 1-204 (289)
47 1txg_A Glycerol-3-phosphate de 99.4 4.5E-12 1.5E-16 125.1 15.7 156 112-287 1-175 (335)
48 2p4q_A 6-phosphogluconate dehy 99.4 3.1E-12 1.1E-16 135.9 15.5 148 112-287 11-170 (497)
49 1ygy_A PGDH, D-3-phosphoglycer 99.4 4.1E-13 1.4E-17 143.5 8.2 168 93-287 124-307 (529)
50 1evy_A Glycerol-3-phosphate de 99.4 5E-12 1.7E-16 127.4 15.6 149 112-284 16-188 (366)
51 1z82_A Glycerol-3-phosphate de 99.4 3.4E-12 1.2E-16 127.5 13.9 185 112-336 15-238 (335)
52 4dll_A 2-hydroxy-3-oxopropiona 99.4 9.3E-12 3.2E-16 124.1 16.5 191 112-337 32-233 (320)
53 1i36_A Conserved hypothetical 99.4 7.9E-12 2.7E-16 120.0 15.2 184 112-340 1-195 (264)
54 3k96_A Glycerol-3-phosphate de 99.4 2.1E-11 7.1E-16 124.3 19.0 152 112-286 30-198 (356)
55 3cky_A 2-hydroxymethyl glutara 99.4 1.1E-11 3.7E-16 121.0 16.3 196 112-342 5-213 (301)
56 1x0v_A GPD-C, GPDH-C, glycerol 99.4 3.4E-11 1.2E-15 120.3 19.8 148 112-286 9-191 (354)
57 2iz1_A 6-phosphogluconate dehy 99.3 2.5E-11 8.6E-16 127.8 19.3 149 112-287 6-164 (474)
58 1yj8_A Glycerol-3-phosphate de 99.3 3.3E-11 1.1E-15 122.3 19.5 149 111-286 21-208 (375)
59 4e21_A 6-phosphogluconate dehy 99.3 1.9E-11 6.5E-16 124.8 17.5 153 105-286 17-175 (358)
60 1yb4_A Tartronic semialdehyde 99.3 9.6E-12 3.3E-16 120.9 14.4 195 111-341 3-210 (295)
61 1wdk_A Fatty oxidation complex 99.3 4.7E-11 1.6E-15 131.9 21.5 208 111-360 314-551 (715)
62 2ekl_A D-3-phosphoglycerate de 99.3 2.8E-12 9.5E-17 128.6 10.2 160 93-277 126-295 (313)
63 2qyt_A 2-dehydropantoate 2-red 99.3 4.7E-12 1.6E-16 123.9 10.5 165 112-287 9-187 (317)
64 1wwk_A Phosphoglycerate dehydr 99.3 1.1E-11 3.6E-16 124.0 12.1 159 93-277 124-293 (307)
65 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.3 4.7E-11 1.6E-15 126.0 17.4 149 112-287 2-164 (478)
66 2pgd_A 6-phosphogluconate dehy 99.3 3.3E-11 1.1E-15 127.2 15.7 148 112-287 3-162 (482)
67 1gdh_A D-glycerate dehydrogena 99.3 5.4E-12 1.9E-16 126.8 8.4 161 93-279 125-300 (320)
68 1ks9_A KPA reductase;, 2-dehyd 99.3 3.2E-11 1.1E-15 116.1 12.6 149 112-287 1-162 (291)
69 1zcj_A Peroxisomal bifunctiona 99.2 3E-10 1E-14 119.4 20.6 210 111-359 37-271 (463)
70 2yjz_A Metalloreductase steap4 98.9 5.9E-13 2E-17 125.2 0.0 151 108-287 17-176 (201)
71 2g76_A 3-PGDH, D-3-phosphoglyc 99.2 2.9E-11 1E-15 122.5 12.3 157 93-276 147-314 (335)
72 4gwg_A 6-phosphogluconate dehy 99.2 2.1E-10 7E-15 121.7 18.5 152 112-287 5-164 (484)
73 3hn2_A 2-dehydropantoate 2-red 99.2 9.8E-11 3.3E-15 116.1 14.9 152 112-287 3-172 (312)
74 2wtb_A MFP2, fatty acid multif 99.2 4.7E-10 1.6E-14 124.1 21.6 243 111-400 312-580 (725)
75 2raf_A Putative dinucleotide-b 99.2 4.2E-11 1.4E-15 112.6 8.6 138 106-286 15-169 (209)
76 1mv8_A GMD, GDP-mannose 6-dehy 99.2 1.1E-09 3.6E-14 113.9 19.3 199 112-336 1-243 (436)
77 3gg9_A D-3-phosphoglycerate de 99.2 1.5E-10 5.1E-15 118.2 12.6 157 94-275 133-310 (352)
78 4dgs_A Dehydrogenase; structur 99.2 2.3E-10 8E-15 116.2 14.0 155 93-277 151-318 (340)
79 3gvx_A Glycerate dehydrogenase 99.1 4.4E-11 1.5E-15 119.1 7.7 151 94-277 107-268 (290)
80 2nac_A NAD-dependent formate d 99.1 6.4E-11 2.2E-15 122.6 8.8 159 93-275 171-342 (393)
81 1qp8_A Formate dehydrogenase; 99.1 1.5E-10 5E-15 115.7 10.9 153 94-275 108-272 (303)
82 2cuk_A Glycerate dehydrogenase 99.1 1.4E-10 4.9E-15 116.1 10.8 154 93-276 123-288 (311)
83 2dbq_A Glyoxylate reductase; D 99.1 1.3E-10 4.3E-15 117.4 10.3 155 93-274 125-297 (334)
84 3ba1_A HPPR, hydroxyphenylpyru 99.1 5.9E-11 2E-15 120.2 7.8 155 92-276 144-310 (333)
85 2vns_A Metalloreductase steap3 99.1 2E-10 6.8E-15 108.3 10.8 148 112-287 29-188 (215)
86 3gg2_A Sugar dehydrogenase, UD 99.1 1.3E-09 4.6E-14 114.2 17.7 200 112-336 3-245 (450)
87 4e5n_A Thermostable phosphite 99.1 2E-10 7E-15 116.0 10.9 160 93-277 125-304 (330)
88 1mx3_A CTBP1, C-terminal bindi 99.1 1E-10 3.5E-15 119.1 7.9 157 94-275 144-319 (347)
89 4hy3_A Phosphoglycerate oxidor 99.1 4.6E-10 1.6E-14 115.1 12.4 157 93-276 155-325 (365)
90 3jtm_A Formate dehydrogenase, 99.1 1.3E-10 4.4E-15 118.6 7.5 160 93-276 144-316 (351)
91 2gcg_A Glyoxylate reductase/hy 99.1 2.4E-10 8.1E-15 115.1 9.2 108 93-213 134-247 (330)
92 2w2k_A D-mandelate dehydrogena 99.1 4.5E-10 1.5E-14 114.1 11.3 110 93-214 138-258 (348)
93 2pi1_A D-lactate dehydrogenase 99.1 1.8E-10 6.1E-15 116.6 7.8 104 94-212 123-230 (334)
94 4g2n_A D-isomer specific 2-hyd 99.1 1.9E-10 6.3E-15 117.2 7.7 158 93-277 152-323 (345)
95 3evt_A Phosphoglycerate dehydr 99.0 1.8E-10 6.2E-15 116.3 6.9 148 94-267 121-277 (324)
96 2o3j_A UDP-glucose 6-dehydroge 99.0 2.9E-09 1E-13 112.3 16.3 207 111-336 9-260 (481)
97 1sc6_A PGDH, D-3-phosphoglycer 99.0 6.5E-10 2.2E-14 115.3 10.3 158 93-275 127-296 (404)
98 3i83_A 2-dehydropantoate 2-red 99.0 2.7E-09 9.2E-14 106.1 14.3 153 112-287 3-174 (320)
99 4a7p_A UDP-glucose dehydrogena 99.0 4.5E-09 1.5E-13 110.3 16.7 201 110-336 7-249 (446)
100 2j6i_A Formate dehydrogenase; 99.0 2.9E-10 9.8E-15 116.4 6.9 164 93-275 144-321 (364)
101 2q3e_A UDP-glucose 6-dehydroge 99.0 5.2E-09 1.8E-13 109.8 16.4 204 111-336 5-254 (467)
102 3hwr_A 2-dehydropantoate 2-red 99.0 3.6E-09 1.2E-13 105.3 14.4 106 106-221 15-131 (318)
103 2d0i_A Dehydrogenase; structur 99.0 2.6E-10 9E-15 115.1 6.0 155 93-275 122-294 (333)
104 3pid_A UDP-glucose 6-dehydroge 99.0 1.3E-08 4.5E-13 106.5 18.4 193 112-336 37-266 (432)
105 3ghy_A Ketopantoate reductase 99.0 3E-09 1E-13 106.4 12.7 94 112-214 4-107 (335)
106 2y0c_A BCEC, UDP-glucose dehyd 99.0 1.5E-08 5.2E-13 107.0 17.9 200 110-335 7-254 (478)
107 3k5p_A D-3-phosphoglycerate de 99.0 1.7E-09 5.7E-14 112.8 10.3 158 94-276 139-308 (416)
108 3hg7_A D-isomer specific 2-hyd 99.0 1.5E-10 5.2E-15 116.9 2.4 147 94-267 125-280 (324)
109 3pp8_A Glyoxylate/hydroxypyruv 98.9 1.9E-10 6.5E-15 115.7 2.9 147 94-267 124-279 (315)
110 3ado_A Lambda-crystallin; L-gu 98.9 3.5E-08 1.2E-12 99.5 18.2 152 111-287 6-182 (319)
111 1bg6_A N-(1-D-carboxylethyl)-L 98.9 5.7E-09 1.9E-13 103.7 11.4 96 112-214 5-111 (359)
112 1j4a_A D-LDH, D-lactate dehydr 98.9 2E-09 6.9E-14 108.6 8.0 160 93-276 128-308 (333)
113 2yq5_A D-isomer specific 2-hyd 98.9 1.3E-09 4.5E-14 110.8 6.6 156 96-276 132-309 (343)
114 1dlj_A UDP-glucose dehydrogena 98.9 7.2E-08 2.5E-12 99.3 19.1 201 112-336 1-237 (402)
115 1dxy_A D-2-hydroxyisocaproate 98.8 2.1E-09 7.1E-14 108.6 5.7 104 93-212 126-233 (333)
116 1xdw_A NAD+-dependent (R)-2-hy 98.8 2.5E-09 8.6E-14 107.9 6.2 160 93-276 127-308 (331)
117 3g79_A NDP-N-acetyl-D-galactos 98.8 2E-07 6.8E-12 98.7 18.0 201 111-336 18-268 (478)
118 3c7a_A Octopine dehydrogenase; 98.7 1.6E-08 5.5E-13 103.2 8.5 94 112-211 3-115 (404)
119 3ojo_A CAP5O; rossmann fold, c 98.7 3E-07 1E-11 96.2 17.7 202 109-336 10-248 (431)
120 3ego_A Probable 2-dehydropanto 98.7 5.2E-08 1.8E-12 96.5 10.4 119 112-243 3-134 (307)
121 1y81_A Conserved hypothetical 98.7 4E-08 1.4E-12 87.3 8.6 110 112-243 15-128 (138)
122 2hk9_A Shikimate dehydrogenase 98.6 1.6E-08 5.3E-13 98.9 4.9 96 107-213 126-222 (275)
123 2o4c_A Erythronate-4-phosphate 98.6 1.2E-08 4.2E-13 105.1 4.2 139 106-275 112-264 (380)
124 3oet_A Erythronate-4-phosphate 98.6 1.6E-08 5.4E-13 104.3 4.0 150 106-286 115-283 (381)
125 2b0j_A 5,10-methenyltetrahydro 98.6 2.7E-06 9.1E-11 84.5 19.1 181 159-373 126-318 (358)
126 3kb6_A D-lactate dehydrogenase 98.6 6.4E-08 2.2E-12 98.0 7.3 104 94-212 123-230 (334)
127 2duw_A Putative COA-binding pr 98.6 8.7E-08 3E-12 85.6 7.1 112 112-244 14-130 (145)
128 1lss_A TRK system potassium up 98.6 5.4E-07 1.9E-11 76.8 11.8 96 112-214 5-105 (140)
129 3d4o_A Dipicolinate synthase s 98.6 1.7E-07 5.7E-12 92.3 9.5 94 106-212 151-244 (293)
130 1v8b_A Adenosylhomocysteinase; 98.5 4.2E-08 1.4E-12 103.9 5.2 101 99-216 247-348 (479)
131 2rir_A Dipicolinate synthase, 98.5 2.3E-07 7.7E-12 91.6 9.6 94 106-212 153-246 (300)
132 4fgw_A Glycerol-3-phosphate de 98.5 5.5E-07 1.9E-11 93.1 12.7 97 112-214 35-154 (391)
133 3zwc_A Peroxisomal bifunctiona 98.5 4.5E-06 1.5E-10 92.7 20.5 212 109-359 314-550 (742)
134 3d64_A Adenosylhomocysteinase; 98.5 4.8E-08 1.6E-12 103.8 4.4 100 99-215 267-367 (494)
135 3oj0_A Glutr, glutamyl-tRNA re 98.5 5.2E-08 1.8E-12 85.5 3.8 89 110-211 21-109 (144)
136 2i99_A MU-crystallin homolog; 98.5 1.3E-07 4.3E-12 94.3 7.1 91 112-215 136-229 (312)
137 3g17_A Similar to 2-dehydropan 98.5 1E-08 3.4E-13 100.8 -1.6 97 112-216 3-101 (294)
138 3h9u_A Adenosylhomocysteinase; 98.4 2.5E-07 8.6E-12 96.8 7.7 92 106-213 207-299 (436)
139 2d5c_A AROE, shikimate 5-dehyd 98.4 1.5E-07 5.2E-12 90.9 5.4 90 107-212 114-206 (263)
140 3n58_A Adenosylhomocysteinase; 98.3 1.2E-06 4.2E-11 92.0 9.1 94 106-215 243-337 (464)
141 1hyh_A L-hicdh, L-2-hydroxyiso 98.3 1.9E-06 6.5E-11 85.3 10.0 95 111-216 1-127 (309)
142 3gvp_A Adenosylhomocysteinase 98.3 8.5E-07 2.9E-11 92.8 6.8 93 106-214 216-309 (435)
143 2fp4_A Succinyl-COA ligase [GD 98.3 1.5E-06 5E-11 87.0 8.2 119 112-245 14-137 (305)
144 3ce6_A Adenosylhomocysteinase; 98.3 1.9E-06 6.5E-11 91.6 9.5 92 107-214 271-363 (494)
145 2dc1_A L-aspartate dehydrogena 98.2 1.6E-06 5.6E-11 82.3 7.7 79 112-211 1-80 (236)
146 1x7d_A Ornithine cyclodeaminas 98.2 9.9E-07 3.4E-11 89.7 5.9 95 112-215 130-229 (350)
147 2nu8_A Succinyl-COA ligase [AD 98.2 2.3E-06 7.9E-11 84.7 8.4 117 112-243 8-127 (288)
148 3euw_A MYO-inositol dehydrogen 98.2 3.5E-06 1.2E-10 84.0 9.6 80 112-200 5-87 (344)
149 1oi7_A Succinyl-COA synthetase 98.2 2.2E-06 7.5E-11 84.9 7.9 118 112-244 8-128 (288)
150 3uuw_A Putative oxidoreductase 98.2 2.6E-06 8.9E-11 83.6 8.1 79 112-199 7-87 (308)
151 2d59_A Hypothetical protein PH 98.2 6.7E-06 2.3E-10 73.2 9.8 121 106-248 17-141 (144)
152 4hkt_A Inositol 2-dehydrogenas 98.2 4.4E-06 1.5E-10 82.8 9.1 78 112-199 4-84 (331)
153 3e9m_A Oxidoreductase, GFO/IDH 98.2 5.1E-06 1.7E-10 82.6 9.4 80 112-199 6-88 (330)
154 3q2i_A Dehydrogenase; rossmann 98.2 4.5E-06 1.6E-10 83.6 9.1 80 112-199 14-96 (354)
155 3p2y_A Alanine dehydrogenase/p 98.1 2.7E-06 9.1E-11 87.8 6.8 98 107-212 181-302 (381)
156 3hdj_A Probable ornithine cycl 98.1 3.1E-06 1.1E-10 84.8 7.0 91 112-216 122-217 (313)
157 2g1u_A Hypothetical protein TM 98.1 1.2E-05 4.1E-10 71.1 9.9 102 104-213 13-120 (155)
158 3ezy_A Dehydrogenase; structur 98.1 4.3E-06 1.5E-10 83.4 7.7 80 112-199 3-85 (344)
159 3mz0_A Inositol 2-dehydrogenas 98.1 6.4E-06 2.2E-10 82.1 8.9 85 112-208 3-93 (344)
160 1iuk_A Hypothetical protein TT 98.1 8.9E-06 3E-10 72.2 8.3 117 112-248 14-134 (140)
161 3vtf_A UDP-glucose 6-dehydroge 98.1 0.00017 5.8E-09 75.7 19.3 195 111-334 21-259 (444)
162 3llv_A Exopolyphosphatase-rela 98.1 2.7E-05 9.2E-10 67.3 11.1 94 112-212 7-104 (141)
163 2ho3_A Oxidoreductase, GFO/IDH 98.1 8E-06 2.7E-10 80.7 8.6 86 111-207 1-88 (325)
164 2glx_A 1,5-anhydro-D-fructose 98.1 1E-05 3.5E-10 79.8 9.1 85 112-208 1-89 (332)
165 1a5z_A L-lactate dehydrogenase 98.0 1.1E-05 3.9E-10 80.4 9.2 93 112-215 1-120 (319)
166 2vhw_A Alanine dehydrogenase; 98.0 5.5E-06 1.9E-10 84.7 6.9 99 106-212 164-268 (377)
167 3fwz_A Inner membrane protein 98.0 3.3E-05 1.1E-09 67.3 10.7 75 112-193 8-86 (140)
168 3db2_A Putative NADPH-dependen 98.0 8.5E-06 2.9E-10 81.5 7.8 79 112-199 6-87 (354)
169 3e18_A Oxidoreductase; dehydro 98.0 1.6E-05 5.4E-10 80.2 9.7 85 112-208 6-92 (359)
170 4dio_A NAD(P) transhydrogenase 98.0 6.9E-06 2.4E-10 85.3 6.7 98 107-212 187-312 (405)
171 1tlt_A Putative oxidoreductase 98.0 2.1E-05 7.3E-10 77.4 9.4 84 112-207 6-91 (319)
172 1xea_A Oxidoreductase, GFO/IDH 98.0 1.6E-05 5.6E-10 78.5 8.5 79 112-198 3-83 (323)
173 3ec7_A Putative dehydrogenase; 98.0 2.1E-05 7.1E-10 79.2 9.4 86 112-208 24-114 (357)
174 3c85_A Putative glutathione-re 97.9 5.4E-05 1.9E-09 68.3 11.1 93 106-205 35-132 (183)
175 2hmt_A YUAA protein; RCK, KTN, 97.9 3E-05 1E-09 66.0 8.9 98 108-213 4-106 (144)
176 2ewd_A Lactate dehydrogenase,; 97.9 3.5E-05 1.2E-09 76.5 10.6 93 112-214 5-124 (317)
177 1lld_A L-lactate dehydrogenase 97.9 2.2E-05 7.5E-10 77.2 9.0 98 112-216 8-129 (319)
178 1omo_A Alanine dehydrogenase; 97.9 9E-06 3.1E-10 81.4 6.2 92 112-215 126-220 (322)
179 3cea_A MYO-inositol 2-dehydrog 97.9 2.1E-05 7.2E-10 78.0 8.8 86 112-209 9-99 (346)
180 3evn_A Oxidoreductase, GFO/IDH 97.9 1.6E-05 5.6E-10 78.8 7.6 86 112-208 6-94 (329)
181 3rc1_A Sugar 3-ketoreductase; 97.9 2E-05 6.8E-10 79.1 8.3 79 112-199 28-110 (350)
182 4had_A Probable oxidoreductase 97.9 2E-05 7E-10 78.3 8.2 86 107-200 19-108 (350)
183 3fr7_A Putative ketol-acid red 97.9 3.1E-05 1.1E-09 82.2 9.7 113 310-443 394-508 (525)
184 3l4b_C TRKA K+ channel protien 97.9 5.3E-05 1.8E-09 70.5 10.1 95 112-212 1-100 (218)
185 3ic5_A Putative saccharopine d 97.9 3.4E-05 1.2E-09 63.5 7.8 92 112-213 6-101 (118)
186 1ydw_A AX110P-like protein; st 97.8 5.4E-05 1.8E-09 75.9 10.2 90 112-209 7-99 (362)
187 3c1a_A Putative oxidoreductase 97.8 1.5E-05 5.2E-10 78.4 5.8 83 112-207 11-95 (315)
188 1x13_A NAD(P) transhydrogenase 97.8 2.2E-05 7.7E-10 81.0 7.2 98 107-212 169-292 (401)
189 2egg_A AROE, shikimate 5-dehyd 97.8 1.3E-05 4.5E-10 79.4 4.9 76 107-191 138-217 (297)
190 3ohs_X Trans-1,2-dihydrobenzen 97.8 3.6E-05 1.2E-09 76.4 8.0 88 112-208 3-93 (334)
191 3u62_A Shikimate dehydrogenase 97.8 3E-06 1E-10 82.4 -0.0 90 108-211 107-199 (253)
192 3qy9_A DHPR, dihydrodipicolina 97.8 8.3E-05 2.8E-09 72.1 9.9 145 111-286 3-162 (243)
193 2v6b_A L-LDH, L-lactate dehydr 97.8 6.1E-05 2.1E-09 74.7 9.1 93 112-215 1-120 (304)
194 1gpj_A Glutamyl-tRNA reductase 97.8 5.7E-05 2E-09 77.7 9.0 75 107-190 164-239 (404)
195 1l7d_A Nicotinamide nucleotide 97.7 5.1E-05 1.7E-09 77.5 8.3 98 107-212 169-294 (384)
196 3don_A Shikimate dehydrogenase 97.7 5.8E-06 2E-10 81.6 0.5 94 107-211 114-209 (277)
197 2p2s_A Putative oxidoreductase 97.7 0.00014 4.9E-09 72.0 10.5 83 112-207 5-92 (336)
198 4fb5_A Probable oxidoreductase 97.7 6.1E-05 2.1E-09 75.0 7.8 97 106-208 18-121 (393)
199 3bio_A Oxidoreductase, GFO/IDH 97.7 0.00011 3.7E-09 72.8 9.4 86 112-211 10-95 (304)
200 3dty_A Oxidoreductase, GFO/IDH 97.7 7.4E-05 2.5E-09 76.2 8.1 88 112-208 13-112 (398)
201 3moi_A Probable dehydrogenase; 97.7 6.3E-05 2.2E-09 76.4 7.3 79 112-199 3-85 (387)
202 1f06_A MESO-diaminopimelate D- 97.7 4.2E-05 1.4E-09 76.3 5.8 85 112-211 4-88 (320)
203 2hjr_A Malate dehydrogenase; m 97.6 0.00024 8.2E-09 71.3 11.4 88 112-211 15-130 (328)
204 2z2v_A Hypothetical protein PH 97.6 4.8E-05 1.6E-09 77.5 5.8 94 109-213 15-109 (365)
205 3ond_A Adenosylhomocysteinase; 97.6 0.00012 4.2E-09 77.6 9.0 92 107-214 262-354 (488)
206 2eez_A Alanine dehydrogenase; 97.6 8.1E-05 2.8E-09 75.6 7.4 99 106-212 162-266 (369)
207 1guz_A Malate dehydrogenase; o 97.6 0.0003 1E-08 69.8 11.1 70 112-188 1-79 (310)
208 1id1_A Putative potassium chan 97.6 0.00043 1.5E-08 60.7 10.7 96 112-213 4-107 (153)
209 1pzg_A LDH, lactate dehydrogen 97.6 0.00031 1.1E-08 70.6 11.0 93 112-211 10-131 (331)
210 4h3v_A Oxidoreductase domain p 97.6 0.00011 3.7E-09 73.2 7.5 90 113-208 8-102 (390)
211 3v5n_A Oxidoreductase; structu 97.5 0.00012 4.2E-09 75.2 7.8 87 112-208 38-137 (417)
212 3o8q_A Shikimate 5-dehydrogena 97.5 2.7E-05 9.3E-10 76.9 2.6 74 107-191 123-200 (281)
213 1h6d_A Precursor form of gluco 97.5 0.00013 4.6E-09 75.5 7.7 88 112-207 84-176 (433)
214 2aef_A Calcium-gated potassium 97.5 0.00026 8.7E-09 66.5 8.8 93 112-213 10-107 (234)
215 3o9z_A Lipopolysaccaride biosy 97.5 0.00018 6.2E-09 71.3 8.1 85 111-208 3-99 (312)
216 1leh_A Leucine dehydrogenase; 97.5 0.00015 5E-09 74.3 7.6 68 107-186 170-238 (364)
217 2yv1_A Succinyl-COA ligase [AD 97.5 0.00012 4.2E-09 72.5 6.9 91 112-216 14-107 (294)
218 4gqa_A NAD binding oxidoreduct 97.5 0.00018 6.2E-09 73.4 7.9 91 112-208 27-123 (412)
219 3oa2_A WBPB; oxidoreductase, s 97.5 0.00021 7.1E-09 71.0 8.0 85 111-208 3-100 (318)
220 2yv2_A Succinyl-COA synthetase 97.5 0.00021 7.3E-09 70.9 7.9 91 112-216 14-108 (297)
221 1ldn_A L-lactate dehydrogenase 97.4 0.00036 1.2E-08 69.5 9.2 70 112-189 7-85 (316)
222 1zh8_A Oxidoreductase; TM0312, 97.4 0.00027 9.4E-09 70.4 8.3 86 112-208 19-109 (340)
223 3pwz_A Shikimate dehydrogenase 97.4 0.00011 3.8E-09 72.2 5.2 73 107-191 117-194 (272)
224 1p77_A Shikimate 5-dehydrogena 97.4 5.8E-05 2E-09 73.5 3.2 76 107-192 116-194 (272)
225 3i23_A Oxidoreductase, GFO/IDH 97.4 0.00028 9.4E-09 70.6 8.2 84 112-208 3-92 (349)
226 1t2d_A LDH-P, L-lactate dehydr 97.4 0.0006 2.1E-08 68.3 10.6 90 112-211 5-125 (322)
227 3m2t_A Probable dehydrogenase; 97.4 0.00021 7.1E-09 72.0 7.1 86 112-208 6-95 (359)
228 2czc_A Glyceraldehyde-3-phosph 97.4 0.00038 1.3E-08 70.0 9.0 94 112-213 3-111 (334)
229 1nyt_A Shikimate 5-dehydrogena 97.4 0.00016 5.5E-09 70.2 6.0 77 107-191 116-193 (271)
230 2vt3_A REX, redox-sensing tran 97.4 0.00018 6.1E-09 68.6 6.0 80 112-200 86-167 (215)
231 3e82_A Putative oxidoreductase 97.4 0.00051 1.8E-08 69.2 9.4 84 112-209 8-95 (364)
232 2ixa_A Alpha-N-acetylgalactosa 97.3 0.00062 2.1E-08 70.5 10.1 85 112-208 21-118 (444)
233 3u3x_A Oxidoreductase; structu 97.3 0.00048 1.6E-08 69.4 8.9 85 112-208 27-115 (361)
234 3f4l_A Putative oxidoreductase 97.3 0.00017 5.7E-09 72.0 5.4 86 112-209 3-93 (345)
235 2i6t_A Ubiquitin-conjugating e 97.3 0.0015 5.1E-08 65.0 11.4 88 112-211 15-124 (303)
236 3gdo_A Uncharacterized oxidore 97.3 0.00052 1.8E-08 68.9 8.1 83 112-208 6-92 (358)
237 3kux_A Putative oxidoreductase 97.3 0.00047 1.6E-08 68.9 7.8 84 112-208 8-94 (352)
238 3phh_A Shikimate dehydrogenase 97.2 0.00036 1.2E-08 68.6 6.5 67 110-190 118-184 (269)
239 2nvw_A Galactose/lactose metab 97.2 0.00051 1.7E-08 72.3 7.9 83 112-199 40-129 (479)
240 1ur5_A Malate dehydrogenase; o 97.2 0.0019 6.4E-08 64.1 11.6 67 112-187 3-79 (309)
241 1nvm_B Acetaldehyde dehydrogen 97.2 0.0011 3.7E-08 66.2 9.8 93 112-212 5-104 (312)
242 3oqb_A Oxidoreductase; structu 97.2 0.0005 1.7E-08 69.3 7.4 86 112-209 7-111 (383)
243 3btv_A Galactose/lactose metab 97.2 0.00045 1.5E-08 71.6 7.2 82 112-198 21-109 (438)
244 3fhl_A Putative oxidoreductase 97.2 0.00045 1.5E-08 69.4 6.9 83 112-208 6-92 (362)
245 1oju_A MDH, malate dehydrogena 97.2 0.0016 5.4E-08 64.6 10.6 67 112-187 1-78 (294)
246 3l9w_A Glutathione-regulated p 97.2 0.0015 5E-08 67.7 10.7 95 112-213 5-104 (413)
247 4gmf_A Yersiniabactin biosynth 97.2 0.00032 1.1E-08 71.8 5.4 86 112-209 8-98 (372)
248 3gvi_A Malate dehydrogenase; N 97.1 0.0018 6.2E-08 65.1 10.6 73 105-187 2-84 (324)
249 3ip3_A Oxidoreductase, putativ 97.1 0.00063 2.1E-08 67.6 7.1 85 112-208 3-94 (337)
250 1y6j_A L-lactate dehydrogenase 97.1 0.0014 4.9E-08 65.3 9.4 89 112-211 8-122 (318)
251 3keo_A Redox-sensing transcrip 97.1 0.00033 1.1E-08 66.7 4.5 147 72-237 42-197 (212)
252 1lc0_A Biliverdin reductase A; 97.1 0.0004 1.4E-08 68.1 4.9 82 112-207 8-91 (294)
253 3p7m_A Malate dehydrogenase; p 97.1 0.0027 9.2E-08 63.7 10.9 70 108-187 3-82 (321)
254 3jyo_A Quinate/shikimate dehyd 97.0 0.00084 2.9E-08 66.2 6.7 77 107-190 124-206 (283)
255 3abi_A Putative uncharacterize 97.0 0.0011 3.8E-08 66.7 7.4 94 106-212 10-108 (365)
256 3pqe_A L-LDH, L-lactate dehydr 97.0 0.0022 7.4E-08 64.6 9.3 70 112-187 6-82 (326)
257 1c1d_A L-phenylalanine dehydro 97.0 0.0015 5.1E-08 66.7 8.1 65 107-184 172-237 (355)
258 1edz_A 5,10-methylenetetrahydr 97.0 0.00032 1.1E-08 70.7 3.1 96 107-213 174-276 (320)
259 3nep_X Malate dehydrogenase; h 97.0 0.0024 8.4E-08 63.9 9.6 68 112-188 1-79 (314)
260 3d0o_A L-LDH 1, L-lactate dehy 97.0 0.0036 1.2E-07 62.4 10.7 70 112-188 7-84 (317)
261 1pjc_A Protein (L-alanine dehy 96.9 0.00088 3E-08 67.8 5.9 98 107-212 164-267 (361)
262 3fef_A Putative glucosidase LP 96.9 0.0014 4.9E-08 68.8 7.5 76 109-193 4-90 (450)
263 2d4a_B Malate dehydrogenase; a 96.9 0.0028 9.7E-08 63.0 9.4 89 113-211 1-115 (308)
264 4ew6_A D-galactose-1-dehydroge 96.9 0.0018 6.2E-08 64.5 7.9 80 112-209 26-109 (330)
265 3ldh_A Lactate dehydrogenase; 96.9 0.0029 9.8E-08 64.0 9.5 93 112-212 22-138 (330)
266 3fbt_A Chorismate mutase and s 96.9 0.0006 2E-08 67.4 4.4 70 107-189 119-189 (282)
267 1ez4_A Lactate dehydrogenase; 96.9 0.0032 1.1E-07 62.9 9.5 68 112-189 6-83 (318)
268 3ngx_A Bifunctional protein fo 96.9 0.0017 5.9E-08 64.2 7.3 74 108-212 148-222 (276)
269 2zqz_A L-LDH, L-lactate dehydr 96.8 0.0037 1.3E-07 62.7 9.8 68 112-189 10-87 (326)
270 1npy_A Hypothetical shikimate 96.8 0.0017 5.8E-08 63.6 6.6 69 109-190 118-187 (271)
271 3l07_A Bifunctional protein fo 96.8 0.0017 5.8E-08 64.5 6.4 76 106-212 157-233 (285)
272 4f3y_A DHPR, dihydrodipicolina 96.8 0.0018 6.1E-08 63.7 6.4 155 112-286 8-185 (272)
273 1b7g_O Protein (glyceraldehyde 96.7 0.0056 1.9E-07 61.8 10.3 94 112-213 2-109 (340)
274 3p2o_A Bifunctional protein fo 96.7 0.0017 5.7E-08 64.5 6.2 76 106-212 156-232 (285)
275 3tl2_A Malate dehydrogenase; c 96.7 0.0035 1.2E-07 62.8 8.6 66 112-186 9-86 (315)
276 4a26_A Putative C-1-tetrahydro 96.7 0.0019 6.5E-08 64.6 6.3 76 106-212 161-239 (300)
277 1cf2_P Protein (glyceraldehyde 96.7 0.0059 2E-07 61.5 9.7 96 111-214 1-111 (337)
278 2xxj_A L-LDH, L-lactate dehydr 96.7 0.0035 1.2E-07 62.3 7.9 67 112-188 1-77 (310)
279 2axq_A Saccharopine dehydrogen 96.6 0.0039 1.3E-07 65.6 8.3 97 106-211 19-118 (467)
280 1ff9_A Saccharopine reductase; 96.6 0.0038 1.3E-07 65.2 7.9 80 109-195 2-85 (450)
281 3ijp_A DHPR, dihydrodipicolina 96.6 0.0094 3.2E-07 59.2 10.3 154 112-286 22-200 (288)
282 3do5_A HOM, homoserine dehydro 96.6 0.0054 1.9E-07 61.7 8.6 98 111-211 2-114 (327)
283 3tnl_A Shikimate dehydrogenase 96.5 0.0043 1.5E-07 62.2 7.7 78 106-190 150-238 (315)
284 3t4e_A Quinate/shikimate dehyd 96.5 0.0036 1.2E-07 62.7 7.1 77 107-190 145-232 (312)
285 2yyy_A Glyceraldehyde-3-phosph 96.5 0.013 4.5E-07 59.3 11.3 92 112-214 3-115 (343)
286 4a5o_A Bifunctional protein fo 96.5 0.0045 1.5E-07 61.5 7.4 76 106-212 157-233 (286)
287 4ina_A Saccharopine dehydrogen 96.5 0.0038 1.3E-07 64.1 7.1 94 111-213 1-108 (405)
288 2csu_A 457AA long hypothetical 96.5 0.0043 1.5E-07 65.0 7.4 88 112-215 9-100 (457)
289 4aj2_A L-lactate dehydrogenase 96.4 0.0082 2.8E-07 60.6 8.9 71 108-186 17-95 (331)
290 3vku_A L-LDH, L-lactate dehydr 96.4 0.005 1.7E-07 62.0 7.1 66 112-187 10-85 (326)
291 2dt5_A AT-rich DNA-binding pro 96.4 0.0011 3.8E-08 62.8 2.0 81 112-200 81-162 (211)
292 1mld_A Malate dehydrogenase; o 96.3 0.014 4.7E-07 58.1 9.8 68 112-187 1-77 (314)
293 1nvt_A Shikimate 5'-dehydrogen 96.3 0.0025 8.6E-08 62.2 4.3 73 107-190 125-205 (287)
294 1b0a_A Protein (fold bifunctio 96.3 0.0059 2E-07 60.7 7.0 76 106-212 155-231 (288)
295 1jw9_B Molybdopterin biosynthe 96.3 0.011 3.6E-07 56.9 8.6 87 105-198 26-141 (249)
296 1a4i_A Methylenetetrahydrofola 96.2 0.0089 3.1E-07 59.7 7.8 77 106-213 161-238 (301)
297 1dih_A Dihydrodipicolinate red 96.2 0.0079 2.7E-07 58.9 7.3 155 112-286 6-184 (273)
298 3upl_A Oxidoreductase; rossman 96.2 0.013 4.5E-07 61.5 9.1 86 112-209 24-136 (446)
299 3fi9_A Malate dehydrogenase; s 96.1 0.012 3.9E-07 59.8 7.7 74 106-186 4-84 (343)
300 3tum_A Shikimate dehydrogenase 96.0 0.005 1.7E-07 60.4 4.9 98 107-211 122-224 (269)
301 3ff4_A Uncharacterized protein 96.0 0.013 4.4E-07 50.9 6.8 109 111-243 4-116 (122)
302 1obb_A Maltase, alpha-glucosid 96.0 0.027 9.2E-07 59.6 10.5 73 112-188 4-87 (480)
303 1ys4_A Aspartate-semialdehyde 95.9 0.021 7.3E-07 57.6 8.9 93 112-214 9-116 (354)
304 1vl6_A Malate oxidoreductase; 95.9 0.021 7.1E-07 59.0 8.8 90 107-209 189-291 (388)
305 3e8x_A Putative NAD-dependent 95.9 0.027 9.1E-07 52.0 8.8 75 105-188 16-94 (236)
306 3ing_A Homoserine dehydrogenas 95.8 0.021 7.1E-07 57.4 8.5 98 112-211 5-116 (325)
307 1j5p_A Aspartate dehydrogenase 95.8 0.0099 3.4E-07 58.0 5.8 80 112-213 13-93 (253)
308 4g65_A TRK system potassium up 95.8 0.014 4.9E-07 61.1 7.5 74 112-192 4-82 (461)
309 3ius_A Uncharacterized conserv 95.8 0.049 1.7E-06 51.4 10.6 69 112-189 6-74 (286)
310 1lnq_A MTHK channels, potassiu 95.7 0.026 9.1E-07 55.6 8.6 91 112-211 116-211 (336)
311 1xyg_A Putative N-acetyl-gamma 95.6 0.021 7.2E-07 58.0 7.6 92 112-213 17-113 (359)
312 2c2x_A Methylenetetrahydrofola 95.6 0.019 6.4E-07 56.9 6.9 78 106-212 154-232 (281)
313 3dfz_A SIRC, precorrin-2 dehyd 95.6 0.034 1.2E-06 53.1 8.5 89 100-198 22-111 (223)
314 2ozp_A N-acetyl-gamma-glutamyl 95.6 0.023 7.8E-07 57.4 7.7 93 112-213 5-100 (345)
315 2x0j_A Malate dehydrogenase; o 95.6 0.019 6.7E-07 56.9 7.0 69 112-186 1-77 (294)
316 3mtj_A Homoserine dehydrogenas 95.4 0.042 1.4E-06 57.6 9.2 91 112-210 11-108 (444)
317 1smk_A Malate dehydrogenase, g 95.4 0.071 2.4E-06 53.1 10.4 67 112-187 9-85 (326)
318 2dvm_A Malic enzyme, 439AA lon 95.4 0.031 1.1E-06 58.5 8.0 93 106-211 182-295 (439)
319 3dr3_A N-acetyl-gamma-glutamyl 95.3 0.047 1.6E-06 55.2 8.7 93 111-213 4-107 (337)
320 3ew7_A LMO0794 protein; Q8Y8U8 95.2 0.069 2.3E-06 48.1 9.0 69 112-188 1-71 (221)
321 3eag_A UDP-N-acetylmuramate:L- 95.2 0.06 2.1E-06 53.3 9.2 67 111-185 4-73 (326)
322 1duv_G Octase-1, ornithine tra 95.0 0.13 4.6E-06 51.9 11.2 70 107-187 152-233 (333)
323 1u8x_X Maltose-6'-phosphate gl 95.0 0.11 3.6E-06 54.9 10.9 77 112-190 29-114 (472)
324 1dxh_A Ornithine carbamoyltran 95.0 0.14 4.8E-06 51.8 11.2 70 107-187 152-233 (335)
325 1s6y_A 6-phospho-beta-glucosid 94.9 0.074 2.5E-06 55.7 9.3 75 112-190 8-95 (450)
326 1pvv_A Otcase, ornithine carba 94.9 0.18 6.2E-06 50.6 11.6 70 106-186 151-231 (315)
327 1ebf_A Homoserine dehydrogenas 94.9 0.019 6.6E-07 58.3 4.6 22 112-133 5-26 (358)
328 2ep5_A 350AA long hypothetical 94.9 0.059 2E-06 54.4 8.0 93 112-213 5-109 (350)
329 1zud_1 Adenylyltransferase THI 94.8 0.068 2.3E-06 51.3 8.1 87 105-198 23-138 (251)
330 1u8f_O GAPDH, glyceraldehyde-3 94.7 0.099 3.4E-06 52.6 9.3 92 112-212 4-123 (335)
331 1o6z_A MDH, malate dehydrogena 94.7 0.086 2.9E-06 51.9 8.7 66 112-187 1-79 (303)
332 1p9l_A Dihydrodipicolinate red 94.7 0.11 3.8E-06 50.1 9.1 79 112-217 1-82 (245)
333 3lk7_A UDP-N-acetylmuramoylala 94.6 0.054 1.8E-06 56.1 7.3 70 107-185 6-79 (451)
334 1p3d_A UDP-N-acetylmuramate--a 94.6 0.085 2.9E-06 54.9 8.8 69 108-185 15-84 (475)
335 3r6d_A NAD-dependent epimerase 94.5 0.062 2.1E-06 49.0 6.7 72 112-189 6-84 (221)
336 1b8p_A Protein (malate dehydro 94.5 0.094 3.2E-06 52.2 8.4 69 112-187 6-92 (329)
337 1lu9_A Methylene tetrahydromet 94.5 0.045 1.5E-06 53.0 5.8 72 108-188 117-198 (287)
338 3qvo_A NMRA family protein; st 94.4 0.036 1.2E-06 51.4 4.8 84 112-202 24-112 (236)
339 4hv4_A UDP-N-acetylmuramate--L 94.3 0.095 3.2E-06 55.1 8.4 69 111-188 22-93 (494)
340 3ip1_A Alcohol dehydrogenase, 94.3 0.29 1E-05 49.5 11.7 96 109-212 213-318 (404)
341 1p0f_A NADP-dependent alcohol 94.2 0.24 8.2E-06 49.3 10.8 92 109-211 191-292 (373)
342 2i6u_A Otcase, ornithine carba 94.2 0.11 3.8E-06 51.9 8.2 71 106-187 144-226 (307)
343 1vlv_A Otcase, ornithine carba 94.2 0.11 3.8E-06 52.3 8.1 70 107-187 164-245 (325)
344 3tpf_A Otcase, ornithine carba 94.1 0.26 9E-06 49.2 10.7 71 107-186 142-222 (307)
345 2nqt_A N-acetyl-gamma-glutamyl 94.0 0.057 1.9E-06 54.8 5.7 89 112-214 10-112 (352)
346 1qyc_A Phenylcoumaran benzylic 94.0 0.15 5E-06 48.5 8.3 81 112-198 5-100 (308)
347 2ejw_A HDH, homoserine dehydro 93.9 0.085 2.9E-06 53.1 6.7 89 112-210 4-96 (332)
348 1e3i_A Alcohol dehydrogenase, 93.9 0.31 1E-05 48.6 10.8 92 109-211 195-296 (376)
349 4a2c_A Galactitol-1-phosphate 93.9 0.33 1.1E-05 47.5 10.8 95 108-212 159-260 (346)
350 3h2s_A Putative NADH-flavin re 93.9 0.31 1.1E-05 44.0 9.9 70 112-188 1-72 (224)
351 3c8m_A Homoserine dehydrogenas 93.9 0.084 2.9E-06 52.8 6.6 93 112-210 7-119 (331)
352 4f2g_A Otcase 1, ornithine car 93.8 0.084 2.9E-06 52.8 6.4 67 107-186 151-224 (309)
353 2jhf_A Alcohol dehydrogenase E 93.8 0.32 1.1E-05 48.5 10.7 92 109-211 191-292 (374)
354 2cdc_A Glucose dehydrogenase g 93.8 0.094 3.2E-06 52.3 6.8 93 107-211 178-277 (366)
355 3two_A Mannitol dehydrogenase; 93.8 0.1 3.5E-06 51.6 7.0 90 109-212 176-265 (348)
356 1cdo_A Alcohol dehydrogenase; 93.8 0.35 1.2E-05 48.2 11.0 92 109-211 192-293 (374)
357 1oth_A Protein (ornithine tran 93.7 0.16 5.6E-06 51.0 8.4 70 106-186 151-231 (321)
358 1hdo_A Biliverdin IX beta redu 93.7 0.24 8.1E-06 43.9 8.6 70 112-188 4-77 (206)
359 4ep1_A Otcase, ornithine carba 93.6 0.16 5.6E-06 51.5 8.2 69 107-186 176-255 (340)
360 3dqp_A Oxidoreductase YLBE; al 93.6 0.19 6.6E-06 45.6 8.1 69 112-189 1-74 (219)
361 2fzw_A Alcohol dehydrogenase c 93.6 0.34 1.2E-05 48.2 10.5 92 109-211 190-291 (373)
362 1y1p_A ARII, aldehyde reductas 93.6 0.33 1.1E-05 46.5 10.1 75 106-187 7-92 (342)
363 2w37_A Ornithine carbamoyltran 93.6 0.16 5.4E-06 51.9 8.1 71 106-187 172-254 (359)
364 4ej6_A Putative zinc-binding d 93.5 0.18 6.1E-06 50.5 8.4 93 109-212 182-284 (370)
365 3hhp_A Malate dehydrogenase; M 93.5 0.24 8.3E-06 49.3 9.2 71 112-187 1-78 (312)
366 2r6j_A Eugenol synthase 1; phe 93.5 0.21 7.3E-06 47.9 8.6 81 112-198 12-102 (318)
367 2dph_A Formaldehyde dismutase; 93.5 0.092 3.2E-06 53.0 6.2 95 109-211 185-298 (398)
368 3uko_A Alcohol dehydrogenase c 93.5 0.28 9.6E-06 49.0 9.7 93 109-212 193-295 (378)
369 2d8a_A PH0655, probable L-thre 93.5 0.14 4.8E-06 50.6 7.3 93 109-212 167-267 (348)
370 3gd5_A Otcase, ornithine carba 93.5 0.2 7E-06 50.4 8.6 69 107-186 154-233 (323)
371 1ml4_A Aspartate transcarbamoy 93.5 0.12 4.1E-06 51.7 6.8 73 106-187 151-230 (308)
372 2f00_A UDP-N-acetylmuramate--L 93.4 0.2 6.8E-06 52.4 8.8 68 109-185 17-85 (491)
373 3e5r_O PP38, glyceraldehyde-3- 93.4 0.23 7.9E-06 50.0 8.9 94 112-213 4-127 (337)
374 1f8f_A Benzyl alcohol dehydrog 93.3 0.16 5.5E-06 50.6 7.6 93 109-212 190-289 (371)
375 4b4u_A Bifunctional protein fo 93.3 0.17 5.9E-06 50.5 7.6 76 106-212 175-251 (303)
376 4h7p_A Malate dehydrogenase; s 93.2 0.42 1.5E-05 48.3 10.6 80 105-186 19-108 (345)
377 2gas_A Isoflavone reductase; N 93.2 0.25 8.7E-06 46.8 8.6 81 112-198 3-99 (307)
378 1kol_A Formaldehyde dehydrogen 93.2 0.17 5.7E-06 51.0 7.6 97 109-212 185-300 (398)
379 1e3j_A NADP(H)-dependent ketos 93.2 0.43 1.5E-05 47.1 10.4 92 109-211 168-270 (352)
380 1pqw_A Polyketide synthase; ro 93.2 0.19 6.6E-06 45.1 7.2 93 109-213 38-138 (198)
381 3s2e_A Zinc-containing alcohol 93.1 0.21 7.2E-06 49.1 8.0 92 109-211 166-262 (340)
382 4gx0_A TRKA domain protein; me 93.0 0.16 5.4E-06 53.8 7.3 85 112-205 349-435 (565)
383 1pl8_A Human sorbitol dehydrog 93.0 0.38 1.3E-05 47.7 9.7 92 109-211 171-272 (356)
384 1vkn_A N-acetyl-gamma-glutamyl 92.9 0.15 5.1E-06 51.9 6.7 90 111-213 13-108 (351)
385 3c1o_A Eugenol synthase; pheny 92.9 0.3 1E-05 46.8 8.6 81 112-198 5-100 (321)
386 3i6i_A Putative leucoanthocyan 92.9 0.26 8.8E-06 48.1 8.2 82 112-199 11-107 (346)
387 4amu_A Ornithine carbamoyltran 92.8 0.25 8.4E-06 50.6 8.2 70 107-185 177-258 (365)
388 3gaz_A Alcohol dehydrogenase s 92.8 0.24 8.2E-06 48.9 7.9 91 109-213 150-247 (343)
389 3grf_A Ornithine carbamoyltran 92.7 0.27 9.4E-06 49.5 8.2 68 107-185 158-241 (328)
390 3d6n_B Aspartate carbamoyltran 92.7 0.12 4.2E-06 51.2 5.6 70 107-189 143-215 (291)
391 3fpf_A Mtnas, putative unchara 92.6 0.55 1.9E-05 46.7 10.2 92 107-209 120-219 (298)
392 3uog_A Alcohol dehydrogenase; 92.6 0.13 4.4E-06 51.3 5.7 92 109-212 189-287 (363)
393 3h8v_A Ubiquitin-like modifier 92.5 0.33 1.1E-05 48.0 8.5 44 98-148 24-68 (292)
394 4dpk_A Malonyl-COA/succinyl-CO 92.5 0.33 1.1E-05 49.3 8.6 89 112-214 8-112 (359)
395 4dpl_A Malonyl-COA/succinyl-CO 92.5 0.33 1.1E-05 49.3 8.6 89 112-214 8-112 (359)
396 3gg2_A Sugar dehydrogenase, UD 92.3 0.42 1.4E-05 49.8 9.2 95 106-214 314-421 (450)
397 3ruf_A WBGU; rossmann fold, UD 92.2 0.45 1.5E-05 46.1 8.9 75 106-187 21-109 (351)
398 3dhn_A NAD-dependent epimerase 92.2 0.15 5.2E-06 46.3 5.2 71 111-189 4-78 (227)
399 1qyd_A Pinoresinol-lariciresin 92.2 0.33 1.1E-05 46.1 7.8 72 112-189 5-87 (313)
400 1pjq_A CYSG, siroheme synthase 92.2 0.56 1.9E-05 48.8 10.1 87 101-197 4-92 (457)
401 2wm3_A NMRA-like family domain 92.1 0.52 1.8E-05 44.7 9.0 71 112-188 6-82 (299)
402 3r7f_A Aspartate carbamoyltran 92.1 0.28 9.5E-06 49.0 7.3 65 107-186 144-211 (304)
403 1iz0_A Quinone oxidoreductase; 92.1 0.14 4.9E-06 49.4 5.1 90 109-211 125-217 (302)
404 4a0s_A Octenoyl-COA reductase/ 92.1 0.45 1.5E-05 48.7 9.1 88 109-212 220-336 (447)
405 3qwb_A Probable quinone oxidor 92.1 0.22 7.4E-06 48.8 6.4 92 109-212 148-247 (334)
406 3fpc_A NADP-dependent alcohol 92.0 0.17 5.7E-06 50.1 5.7 93 109-212 166-266 (352)
407 3sds_A Ornithine carbamoyltran 92.0 0.38 1.3E-05 49.0 8.3 68 108-186 186-266 (353)
408 7mdh_A Protein (malate dehydro 92.0 0.89 3E-05 46.6 11.1 69 112-186 33-116 (375)
409 1rjw_A ADH-HT, alcohol dehydro 92.0 0.27 9.2E-06 48.4 7.0 92 109-211 164-260 (339)
410 3jyn_A Quinone oxidoreductase; 91.9 0.26 9.1E-06 48.1 6.8 92 109-212 140-239 (325)
411 3slg_A PBGP3 protein; structur 91.8 0.22 7.5E-06 48.9 6.1 80 101-186 15-99 (372)
412 2yfk_A Aspartate/ornithine car 91.8 0.36 1.2E-05 50.2 8.0 68 108-186 186-271 (418)
413 3e05_A Precorrin-6Y C5,15-meth 91.7 1 3.5E-05 40.3 10.1 92 109-211 40-141 (204)
414 4eye_A Probable oxidoreductase 91.7 0.25 8.5E-06 48.8 6.4 90 109-211 159-256 (342)
415 1t4b_A Aspartate-semialdehyde 91.6 0.31 1.1E-05 49.6 7.2 91 111-213 1-99 (367)
416 2o7s_A DHQ-SDH PR, bifunctiona 91.6 0.2 7E-06 53.0 6.0 48 107-161 361-408 (523)
417 1sb8_A WBPP; epimerase, 4-epim 91.6 0.57 1.9E-05 45.6 8.9 74 107-187 24-111 (352)
418 4b7c_A Probable oxidoreductase 91.6 0.32 1.1E-05 47.6 7.0 93 109-213 149-249 (336)
419 2fk8_A Methoxy mycolic acid sy 91.6 1.1 3.9E-05 43.0 10.9 90 109-210 90-192 (318)
420 3hn7_A UDP-N-acetylmuramate-L- 91.5 0.48 1.6E-05 50.1 8.8 75 105-188 14-92 (524)
421 2ph5_A Homospermidine synthase 91.5 0.28 9.7E-06 51.9 7.0 92 112-212 14-114 (480)
422 2hcy_A Alcohol dehydrogenase 1 91.5 0.51 1.7E-05 46.5 8.5 92 109-211 169-268 (347)
423 2ef0_A Ornithine carbamoyltran 91.5 0.49 1.7E-05 47.1 8.3 71 106-187 150-222 (301)
424 3gpi_A NAD-dependent epimerase 91.5 0.24 8.4E-06 46.7 5.9 66 112-188 4-73 (286)
425 3fbg_A Putative arginate lyase 91.4 0.36 1.2E-05 47.6 7.3 94 109-213 150-249 (346)
426 2c0c_A Zinc binding alcohol de 91.4 0.38 1.3E-05 47.9 7.6 93 109-213 163-262 (362)
427 3q2o_A Phosphoribosylaminoimid 91.3 0.19 6.5E-06 50.5 5.2 69 106-185 10-82 (389)
428 3gms_A Putative NADPH:quinone 91.3 0.4 1.4E-05 47.1 7.5 93 108-212 143-243 (340)
429 4a7p_A UDP-glucose dehydrogena 91.2 0.4 1.4E-05 50.0 7.8 93 107-214 319-424 (446)
430 3csu_A Protein (aspartate carb 91.2 0.54 1.9E-05 47.0 8.3 73 106-186 150-229 (310)
431 1uuf_A YAHK, zinc-type alcohol 91.2 0.2 7E-06 50.2 5.3 90 109-211 194-287 (369)
432 1piw_A Hypothetical zinc-type 91.2 0.23 7.8E-06 49.4 5.6 92 109-211 179-275 (360)
433 4fs3_A Enoyl-[acyl-carrier-pro 91.2 0.54 1.9E-05 44.5 8.0 39 107-152 3-44 (256)
434 3tqh_A Quinone oxidoreductase; 91.2 0.39 1.3E-05 46.8 7.1 93 108-213 151-246 (321)
435 4g65_A TRK system potassium up 91.1 1.2 4E-05 46.5 11.2 95 112-213 236-335 (461)
436 2r00_A Aspartate-semialdehyde 91.1 0.2 6.9E-06 50.2 5.1 90 112-214 4-98 (336)
437 1v3u_A Leukotriene B4 12- hydr 91.1 0.52 1.8E-05 46.0 7.9 92 109-212 145-244 (333)
438 1yqd_A Sinapyl alcohol dehydro 91.0 0.24 8.1E-06 49.5 5.6 89 109-211 187-281 (366)
439 3hsk_A Aspartate-semialdehyde 91.0 0.55 1.9E-05 48.2 8.3 88 112-213 20-125 (381)
440 3q98_A Transcarbamylase; rossm 90.9 0.53 1.8E-05 48.6 8.1 71 107-186 188-274 (399)
441 4dup_A Quinone oxidoreductase; 90.9 0.35 1.2E-05 47.9 6.6 92 109-212 167-265 (353)
442 2q1s_A Putative nucleotide sug 90.8 0.28 9.7E-06 48.5 5.9 76 106-188 28-109 (377)
443 2b5w_A Glucose dehydrogenase; 90.8 0.49 1.7E-05 46.9 7.6 92 108-211 171-272 (357)
444 1gtm_A Glutamate dehydrogenase 90.7 0.25 8.4E-06 51.4 5.5 35 108-149 210-245 (419)
445 2h1q_A Hypothetical protein; Z 90.7 0.53 1.8E-05 46.2 7.5 64 99-185 130-193 (270)
446 1kyq_A Met8P, siroheme biosynt 90.6 0.35 1.2E-05 47.5 6.1 36 106-148 9-44 (274)
447 3gqv_A Enoyl reductase; medium 90.5 1.7 5.8E-05 43.3 11.3 94 108-213 163-264 (371)
448 4a8t_A Putrescine carbamoyltra 90.5 0.45 1.5E-05 48.2 7.1 70 107-186 172-250 (339)
449 3m2p_A UDP-N-acetylglucosamine 90.5 0.32 1.1E-05 46.5 5.8 66 112-187 3-71 (311)
450 3jv7_A ADH-A; dehydrogenase, n 90.5 0.56 1.9E-05 46.1 7.6 94 108-212 170-270 (345)
451 3cps_A Glyceraldehyde 3-phosph 90.4 0.81 2.8E-05 46.5 8.9 94 111-213 17-139 (354)
452 2q3e_A UDP-glucose 6-dehydroge 90.4 0.96 3.3E-05 47.0 9.7 96 107-214 326-445 (467)
453 2bka_A CC3, TAT-interacting pr 90.4 0.3 1E-05 44.7 5.2 73 108-188 16-94 (242)
454 1y7t_A Malate dehydrogenase; N 90.3 0.35 1.2E-05 47.6 6.0 68 112-186 5-88 (327)
455 4id9_A Short-chain dehydrogena 90.3 0.48 1.7E-05 45.8 6.9 68 106-187 15-86 (347)
456 4gx0_A TRKA domain protein; me 90.2 1.3 4.6E-05 46.6 10.7 92 112-211 128-224 (565)
457 2pzm_A Putative nucleotide sug 90.2 0.31 1.1E-05 47.2 5.4 77 104-187 14-97 (330)
458 1yb1_A 17-beta-hydroxysteroid 90.1 0.97 3.3E-05 42.7 8.7 53 88-150 12-65 (272)
459 2hjs_A USG-1 protein homolog; 90.0 0.24 8E-06 49.8 4.5 89 112-213 7-100 (340)
460 4a8p_A Putrescine carbamoyltra 89.9 0.53 1.8E-05 48.0 7.0 69 107-185 150-227 (355)
461 3goh_A Alcohol dehydrogenase, 89.9 0.37 1.3E-05 46.7 5.7 88 109-212 142-229 (315)
462 4dvj_A Putative zinc-dependent 89.9 0.98 3.4E-05 45.0 8.9 91 109-211 171-269 (363)
463 3oh8_A Nucleoside-diphosphate 89.8 1.6 5.4E-05 45.6 10.8 63 110-187 147-210 (516)
464 3m6i_A L-arabinitol 4-dehydrog 89.8 1.3 4.4E-05 43.8 9.7 92 109-211 179-282 (363)
465 3o38_A Short chain dehydrogena 89.8 0.44 1.5E-05 44.7 6.0 39 106-151 18-58 (266)
466 3g79_A NDP-N-acetyl-D-galactos 89.8 0.69 2.3E-05 48.8 8.0 91 107-214 350-452 (478)
467 1qor_A Quinone oxidoreductase; 89.7 0.45 1.5E-05 46.3 6.2 91 109-211 140-238 (327)
468 4ffl_A PYLC; amino acid, biosy 89.7 0.34 1.2E-05 47.9 5.3 32 111-148 1-32 (363)
469 3hm2_A Precorrin-6Y C5,15-meth 89.4 1.6 5.5E-05 37.6 9.0 91 109-211 25-126 (178)
470 2nxc_A L11 mtase, ribosomal pr 89.4 0.88 3E-05 43.0 7.8 90 109-211 120-217 (254)
471 1xgk_A Nitrogen metabolite rep 89.4 1.6 5.4E-05 43.2 9.9 71 112-188 6-83 (352)
472 3pwk_A Aspartate-semialdehyde 89.4 0.23 7.8E-06 50.7 3.9 86 112-213 3-96 (366)
473 2o3j_A UDP-glucose 6-dehydroge 89.3 1.6 5.4E-05 45.7 10.4 97 107-214 332-449 (481)
474 1y8q_A Ubiquitin-like 1 activa 89.2 1.6 5.3E-05 43.9 9.9 88 105-199 31-146 (346)
475 1zsy_A Mitochondrial 2-enoyl t 89.1 1.7 6E-05 42.8 10.0 94 109-213 167-271 (357)
476 2a9f_A Putative malic enzyme ( 89.0 0.51 1.7E-05 48.8 6.1 92 107-211 185-288 (398)
477 3nkl_A UDP-D-quinovosamine 4-d 89.0 0.91 3.1E-05 38.4 6.9 92 112-214 5-101 (141)
478 1wly_A CAAR, 2-haloacrylate re 88.9 0.57 2E-05 45.7 6.3 91 109-211 145-243 (333)
479 3aog_A Glutamate dehydrogenase 88.9 0.75 2.6E-05 48.1 7.5 32 106-144 231-262 (440)
480 2vn8_A Reticulon-4-interacting 88.8 2.4 8.3E-05 42.1 10.9 94 109-213 183-281 (375)
481 2x5o_A UDP-N-acetylmuramoylala 88.8 0.23 7.8E-06 51.1 3.4 69 108-186 3-72 (439)
482 3orq_A N5-carboxyaminoimidazol 88.8 0.25 8.7E-06 49.6 3.7 66 108-184 10-79 (377)
483 1kpg_A CFA synthase;, cyclopro 88.8 2.7 9.1E-05 39.5 10.7 89 109-210 64-166 (287)
484 1orr_A CDP-tyvelose-2-epimeras 88.7 1.6 5.6E-05 41.7 9.3 71 111-187 1-82 (347)
485 1l3i_A Precorrin-6Y methyltran 88.7 1.1 3.7E-05 38.8 7.3 90 109-211 33-133 (192)
486 2j3h_A NADP-dependent oxidored 88.6 0.69 2.3E-05 45.3 6.6 92 109-212 155-255 (345)
487 2qrj_A Saccharopine dehydrogen 88.3 0.19 6.6E-06 51.9 2.5 79 112-212 215-300 (394)
488 3rui_A Ubiquitin-like modifier 88.3 1.3 4.6E-05 44.7 8.6 35 106-147 30-65 (340)
489 3u95_A Glycoside hydrolase, fa 88.3 0.68 2.3E-05 48.7 6.7 72 112-186 1-84 (477)
490 3l5o_A Uncharacterized protein 88.2 1.1 3.6E-05 44.1 7.6 66 97-185 128-193 (270)
491 3h5n_A MCCB protein; ubiquitin 88.2 1.1 3.7E-05 45.2 7.9 37 105-148 113-150 (353)
492 3tz6_A Aspartate-semialdehyde 88.1 0.31 1.1E-05 49.3 3.8 87 112-213 2-95 (344)
493 4hb9_A Similarities with proba 88.1 0.45 1.6E-05 46.5 4.9 32 112-149 2-33 (412)
494 1yb5_A Quinone oxidoreductase; 88.1 1.1 3.7E-05 44.5 7.7 91 109-211 170-268 (351)
495 4ekn_B Aspartate carbamoyltran 88.0 0.88 3E-05 45.4 7.0 72 107-186 148-226 (306)
496 3e48_A Putative nucleoside-dip 88.0 1.4 4.7E-05 41.5 8.0 71 112-188 1-75 (289)
497 3pi7_A NADH oxidoreductase; gr 88.0 2.4 8.3E-05 41.6 10.2 90 112-212 166-263 (349)
498 5mdh_A Malate dehydrogenase; o 87.5 0.42 1.4E-05 47.9 4.4 69 112-186 4-87 (333)
499 3njr_A Precorrin-6Y methylase; 87.5 2.8 9.7E-05 38.0 9.7 89 109-212 55-154 (204)
500 2y0c_A BCEC, UDP-glucose dehyd 87.4 2.5 8.4E-05 44.3 10.3 93 107-214 325-441 (478)
No 1
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=100.00 E-value=4.1e-103 Score=824.64 Aligned_cols=395 Identities=87% Similarity=1.342 Sum_probs=375.6
Q ss_pred CccccccccchhhhhhhhccccccceeecCcccccccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEe
Q 012479 68 TPFLLDFETSVFKKDMISLADRDEYIVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGL 147 (462)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~f~~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~ 147 (462)
++++++|||++|.+++++|+|++|+|+++|+|.|++++++|+|+|||+|||+|+||+++|++|+++++++|+|++|++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~g~~E~v~~~~~w~~~~~~~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~ 90 (525)
T 3fr7_A 11 AMPSLDFDTSVFNKEKVSLAGHEEYIVRGGRNLFPLLPEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGL 90 (525)
T ss_dssp ----CCCCCSSSCEEEEEETTEEEEEEECCGGGGGGHHHHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred cccccccccccceeeEeecCCcceEEEeccccccccChHHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEe
Confidence 45779999999999999999999999999999999999999999999999999999999999999988898999999999
Q ss_pred cCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEeccchHHHhhhccccCC
Q 012479 148 RKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFP 227 (462)
Q Consensus 148 r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~G~~i~~~~~~~i~~p 227 (462)
+.++++++.|++.|+...+++..++.|++++||+|||++||..+.+++++|+|+|++|++|+++|||+++++++..+.+|
T Consensus 91 r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVILaVP~~~~~eVl~eI~p~LK~GaILs~AaGf~I~~le~~~i~~p 170 (525)
T 3fr7_A 91 RKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLISDAAQADNYEKIFSHMKPNSILGLSHGFLLGHLQSAGLDFP 170 (525)
T ss_dssp CTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEECSCHHHHHHHHHHHHHHSCTTCEEEESSSHHHHHHHHTTCCCC
T ss_pred CCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEECCChHHHHHHHHHHHHhcCCCCeEEEeCCCCHHHHhhhcccCC
Confidence 98888999999999984233346899999999999999999999999999999999999999999999988875567889
Q ss_pred CCccEEecccCCCchhhHHhhhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhH
Q 012479 228 KNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERG 307 (462)
Q Consensus 228 ~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~aliav~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqt 307 (462)
++++|||+|||+|++.||++|.+|+++||+|+|++|+++||+++++++++++|++++|++++++|+|++|+++||||+|+
T Consensus 171 ~dv~VVrVmPNtPg~~VR~~y~~G~~~~g~Gv~~liAv~qd~tgea~e~alala~aiG~~~vieTtf~eE~e~DLfgeqt 250 (525)
T 3fr7_A 171 KNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYKSDIFGERG 250 (525)
T ss_dssp TTSEEEEEEESSCHHHHHHHHHHHTTSTTCSCCEEEEEEECSSSCHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHT
T ss_pred CCCcEEEEecCCCchhHHHHHhcccccccCCccEEEEcCCCCCHHHHHHHHHHHHHCCCCeeeeeeeeeehhHhhhhhHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHhcCCcchhhhchhhccCchhHHHHHHH
Q 012479 308 ILLGAVHGIVESLFRRFTENGMNEDLAYKNTVECITGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSASYYPCMEILYE 387 (462)
Q Consensus 308 vL~G~~paliea~~d~~v~~G~~~e~A~~~~~e~i~Gli~~li~e~G~~~m~~~vs~~~~aeyg~~~~~~~~~~~~~m~e 387 (462)
+|||++|++|+++||++|++|||||+||++++|+++|+|++||+++|+.+|+++||||+++|||++|+..+.|+|++|++
T Consensus 251 vLsG~~pAlieA~~d~lVe~G~~pe~Ay~~~~qel~~~i~~li~e~G~~~m~~~~S~ta~~~~~~~~~~~~~~~~~~m~~ 330 (525)
T 3fr7_A 251 ILLGAVHGIVEALFRRYTEQGMDEEMAYKNTVEGITGIISKTISKKGMLEVYNSLTEEGKKEFNKAYSASFYPCMDILYE 330 (525)
T ss_dssp TTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTHHHHHHHHHCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHcCcHHHHHHHHHhccchHHHHHHHHH
Confidence 99999999999999999999999999999999999966999999999999999999988899999887778899999999
Q ss_pred HHHhccCChhhhHHHHhcccccccCCCCcccchhhhcChhHHHhHHHHhcCCCCCCCCCCCchhHHHHHhhhhcC
Q 012479 388 CYEDVAAGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRSTRPAGDLGPLHPFTAGVYAALMMAQV 462 (462)
Q Consensus 388 ~~~~i~~G~far~~~~~~~~~~~~~g~~~~~~~~i~~~~ie~vG~~lR~~~~~~~~~~~~p~t~g~~~~~~~~~~ 462 (462)
+|++||+|+|+|+|+++|++++|+.|+|.|+|++|++|+|||||++||++||++++|||||||+|||||+||||+
T Consensus 331 ~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vr~~r~~~~~~~~~~~~~~~~~~~~~~~~ 405 (525)
T 3fr7_A 331 CYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGNIDQTRMWKVGEKVRSTRPENDLGPLHPFTAGVYVALMMAQI 405 (525)
T ss_dssp HHHHHHHSHHHHHHHHHHHTTSCBTTBCCCCCCCSTTSHHHHHHHHHHHHCCTTCCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHhcCccchhccccccchhhhcccHHHHHHHHHHhcCCcccCCCCCcchHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999995
No 2
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=100.00 E-value=8.5e-83 Score=660.84 Aligned_cols=347 Identities=26% Similarity=0.395 Sum_probs=318.0
Q ss_pred ccccccchhhhhhhh-----ccccccceeecCcccccccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEE
Q 012479 71 LLDFETSVFKKDMIS-----LADRDEYIVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV 145 (462)
Q Consensus 71 ~~~~~~~~~~~~~~~-----~~~~~e~~~~~~~~~f~~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Viv 145 (462)
.|||||++||+|+.+ ||+++| |.+.++.||| |||+|||||+||++||+||||| |++|+|
T Consensus 2 ~ny~n~l~~~~~~~~~~~c~~m~~~e---------F~~~~~~lkg-K~IaVIGyGsQG~AqAlNLRDS------Gv~V~V 65 (491)
T 3ulk_A 2 ANYFNTLNLRQQLAQLGKCRFMGRDE---------FADGASYLQG-KKVVIVGCGAQGLNQGLNMRDS------GLDISY 65 (491)
T ss_dssp CCTGGGSCHHHHHHHHTCCEECCGGG---------GTTTTGGGTT-SEEEEESCSHHHHHHHHHHHHT------TCEEEE
T ss_pred cchhccccHHHHHHHhccceeccHHH---------hcchhHHHcC-CEEEEeCCChHhHHHHhHHHhc------CCcEEE
Confidence 499999999999987 898888 9999999999 9999999999999999999999 999999
Q ss_pred EecCCc-----hhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEeccchHHHhh
Q 012479 146 GLRKGS-----RSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQ 220 (462)
Q Consensus 146 g~r~~~-----~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~G~~i~~~~ 220 (462)
|+|+++ +||++|+++||. +.+++|++++||+|++++||+.|.++|++|.|+||+|++|.|+|||+|++
T Consensus 66 glr~~s~~e~~~S~~~A~~~Gf~-----v~~~~eA~~~ADvV~~L~PD~~q~~vy~~I~p~lk~G~~L~faHGFnI~~-- 138 (491)
T 3ulk_A 66 ALRKEAIAEKRASWRKATENGFK-----VGTYEELIPQADLVINLTPDKQHSDVVRTVQPLMKDGAALGYSHGFNIVE-- 138 (491)
T ss_dssp EECHHHHHTTCHHHHHHHHTTCE-----EEEHHHHGGGCSEEEECSCGGGHHHHHHHHGGGSCTTCEEEESSCHHHHT--
T ss_pred EeCCCCcccccchHHHHHHCCCE-----ecCHHHHHHhCCEEEEeCChhhHHHHHHHHHhhCCCCCEEEecCcccccc--
Confidence 999544 899999999999 57899999999999999999999999999999999999999999999977
Q ss_pred hccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceEEEeec--cCCCHHHHHHHHHHHHHhCCCc--ccccchhh
Q 012479 221 SMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH--QDVDGRATNVALGWSVALGSPF--TFATTLEQ 296 (462)
Q Consensus 221 ~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~aliav~--qd~tgea~e~a~al~~aiG~~~--viettf~~ 296 (462)
..+.||+|++||+|+||+||+.||++|++| +|+|++|+|| ||+++++++++++|+.++|+++ +++|||++
T Consensus 139 -~~i~pp~dvdVimVAPKgpG~~VR~~y~~G-----~GvP~liAVhqeqD~sG~a~~~AlayA~aiG~~raGvieTTF~e 212 (491)
T 3ulk_A 139 -VGEQIRKDITVVMVAPKCPGTEVREEYKRG-----FGVPTLIAVHPENDPKGEGMAIAKAWAAATGGHRAGVLESSFVA 212 (491)
T ss_dssp -TCCCCCTTSEEEEEEESSCHHHHHHHHHTT-----CCCCEEEEECGGGCTTSCHHHHHHHHHHHHTGGGTCEEECCHHH
T ss_pred -cccccCCCcceEEeCCCCCcHHHHHHHHcC-----CCCceEEEEEeCCCCchhHHHHHHHHHHhcCCCcCceeeccHHH
Confidence 457999999999999999999999999997 8999999997 8999999999999999999985 99999999
Q ss_pred hccccchhhhHhHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHhcCCcchhhhchhhcc
Q 012479 297 EYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVECITGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSA 376 (462)
Q Consensus 297 E~~~dlfgeqtvL~G~~paliea~~d~~v~~G~~~e~A~~~~~e~i~Gli~~li~e~G~~~m~~~vs~~~~aeyg~~~~~ 376 (462)
|+++||||||++|||+++++++++||++|++||+|++||+++.++++ +|+|+|+++||.+||++|| +|++||+|..+
T Consensus 213 EtetDLfGEQaVLcGgl~~li~agFetLveaGy~P~~a~~~~~~e~k-lIvdli~egGi~~M~~siS--~TAe~G~~~~~ 289 (491)
T 3ulk_A 213 EVKSDLMGEQTILCGMLQAGSLLCFDKLVEEGTDPAYAEKLIQFGWE-TITEALKQGGITLMMDRLS--NPAKLRAYALS 289 (491)
T ss_dssp HHHHHHHHHHTTTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHTSC--HHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh-HHHHHHHhCCHHHHHHhcC--chhhccchhhh
Confidence 99999999999999999999999999999999999999999888777 8999999999999999999 68899998755
Q ss_pred C--chhHHHHHHHHHHhccCChhhhHHHHhcccccccCCCCccc-ch-hhhcChhHHHhHHHHhcCCC--CCCCCCCCch
Q 012479 377 S--YYPCMEILYECYEDVAAGSEIRSVVLAGRRFYEKEGLPAFP-MG-KIDQTRMWKVGERVRSTRPA--GDLGPLHPFT 450 (462)
Q Consensus 377 ~--~~~~~~~m~e~~~~i~~G~far~~~~~~~~~~~~~g~~~~~-~~-~i~~~~ie~vG~~lR~~~~~--~~~~~~~p~t 450 (462)
. .+.++++|+++|++||+|+|+|+|+.+++ +|.+.|+ ++ +..+|++| .+|+ .+++|..|||
T Consensus 290 ~~~~~~~k~~~~~~l~~I~sG~Fa~~~~~e~~-----~g~~~l~~~R~~~~~h~iE--------k~~~~~~~I~~qe~f~ 356 (491)
T 3ulk_A 290 EQLKEIMAPLFQKHMDDIISGEFSSGMMADWA-----NDDKKLLTWREETGKTAFE--------TAPQYEGKIGEQEYFD 356 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH-----TTTHHHHHHHHHHHHSHHH--------HCCCCCSCCCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHhCCcchHHHHHHHH-----cCChhHHHHHHHhcCCccc--------cCcccccCCCcccchh
Confidence 3 35678899999999999999999999864 6777765 22 33456655 4665 5678899999
Q ss_pred hHHH-HHhhhhcC
Q 012479 451 AGVY-AALMMAQV 462 (462)
Q Consensus 451 ~g~~-~~~~~~~~ 462 (462)
+||| ||+|+|+|
T Consensus 357 ~Gilmva~v~a~v 369 (491)
T 3ulk_A 357 KGVLMIAMVKAGV 369 (491)
T ss_dssp TCHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHH
Confidence 9999 99999874
No 3
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=100.00 E-value=1.3e-47 Score=387.94 Aligned_cols=310 Identities=28% Similarity=0.490 Sum_probs=273.2
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEe
Q 012479 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLa 185 (462)
..+++ ++|+|||+|+||.++|++|+++ |++|+++++..+++++.+.+.|+.. . +.++++++||+||++
T Consensus 12 ~~l~~-~~I~IIG~G~mG~alA~~L~~~------G~~V~~~~~~~~~~~~~a~~~G~~~----~-~~~e~~~~aDvVila 79 (338)
T 1np3_A 12 SIIQG-KKVAIIGYGSQGHAHACNLKDS------GVDVTVGLRSGSATVAKAEAHGLKV----A-DVKTAVAAADVVMIL 79 (338)
T ss_dssp HHHHT-SCEEEECCSHHHHHHHHHHHHT------TCCEEEECCTTCHHHHHHHHTTCEE----E-CHHHHHHTCSEEEEC
T ss_pred chhcC-CEEEEECchHHHHHHHHHHHHC------cCEEEEEECChHHHHHHHHHCCCEE----c-cHHHHHhcCCEEEEe
Confidence 56788 9999999999999999999999 9888888887666688888899874 3 888999999999999
Q ss_pred ecchhHHHHHH-HHHhcCCCCcEEEEeccchHHHhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceEEEe
Q 012479 186 ISDAAQADNYE-KIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (462)
Q Consensus 186 vpd~a~~~vl~-eI~~~Lk~gaiL~~a~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~alia 264 (462)
+|+..+.++++ ++.+++++|++|++++|+++ .... +..+.+++|+++||++|++.++++|+.| +|.+++++
T Consensus 80 vp~~~~~~v~~~~i~~~l~~~~ivi~~~gv~~-~~~~--~~~~~~~~vv~~~P~gp~~a~~~l~~~G-----~g~~~ii~ 151 (338)
T 1np3_A 80 TPDEFQGRLYKEEIEPNLKKGATLAFAHGFSI-HYNQ--VVPRADLDVIMIAPKAPGHTVRSEFVKG-----GGIPDLIA 151 (338)
T ss_dssp SCHHHHHHHHHHHTGGGCCTTCEEEESCCHHH-HTTS--SCCCTTCEEEEEEESSCSHHHHHHHHTT-----CCCCEEEE
T ss_pred CCcHHHHHHHHHHHHhhCCCCCEEEEcCCchh-HHHh--hcCCCCcEEEeccCCCCchhHHHHHhcc-----CCCeEEEE
Confidence 99999999999 99999999999999999987 4433 3346778999999999999999999875 79999999
Q ss_pred eccCCCHHHHHHHHHHHHHhCCCc--ccccchhhhccccchhhhHhHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 012479 265 VHQDVDGRATNVALGWSVALGSPF--TFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVECI 342 (462)
Q Consensus 265 v~qd~tgea~e~a~al~~aiG~~~--viettf~~E~~~dlfgeqtvL~G~~paliea~~d~~v~~G~~~e~A~~~~~e~i 342 (462)
++++.++++++.++.|++.+|..+ ++++++.+|++.|+|+++++|||++|+++...++.+++.|++++.||++++++.
T Consensus 152 ~~~~~~~~a~~~~~~l~~~lG~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~l~~~Gl~~~~a~~e~~~~~ 231 (338)
T 1np3_A 152 IYQDASGNAKNVALSYACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAGYAPEMAYFECLHEL 231 (338)
T ss_dssp EEECSSSCHHHHHHHHHHHTTHHHHCEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTTH
T ss_pred ecCCCCHHHHHHHHHHHHHcCCCccceEeechhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHhhhHH
Confidence 999999999999999999999755 889999999999999999999999999999999999999999999999999887
Q ss_pred HHHHHHHHHHhcHHHHHHhcCCcchhhhchhhccC---chhHHHHHHHHHHhccCChhhhHHHHhcccccccCCCCccc-
Q 012479 343 TGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSAS---YYPCMEILYECYEDVAAGSEIRSVVLAGRRFYEKEGLPAFP- 418 (462)
Q Consensus 343 ~Gli~~li~e~G~~~m~~~vs~~~~aeyg~~~~~~---~~~~~~~m~e~~~~i~~G~far~~~~~~~~~~~~~g~~~~~- 418 (462)
. ++.+++..+|+..|+...| +.++|+++.... .+..++.|+++++.|++|+|.++|+.+++ .+++.|+
T Consensus 232 ~-~~~~~~~~gg~~~~r~a~s--~p~~~~d~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~-----~~r~~~~~ 303 (338)
T 1np3_A 232 K-LIVDLMYEGGIANMNYSIS--NNAEYGEYVTGPEVINAESRAAMRNALKRIQDGEYAKMFITEGA-----ANYPSMTA 303 (338)
T ss_dssp H-HHHHHHHHHHHHHHHHHSC--HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTTHHHHHHHHHHH-----TTSHHHHH
T ss_pred H-HHHHHHHhcCHHHHHHhcC--CHHHHhhhhcCCccccHHHHHHHHHHHHHHhCCHHHHHHHHHHh-----cccHHHHH
Confidence 6 7899989999988866666 678899976332 15678899999999999999999999875 5677776
Q ss_pred ch-hhhcChhHHHhHHHHhcCCCCCC
Q 012479 419 MG-KIDQTRMWKVGERVRSTRPAGDL 443 (462)
Q Consensus 419 ~~-~i~~~~ie~vG~~lR~~~~~~~~ 443 (462)
++ ++++|+||+||++||++|||++.
T Consensus 304 ~~~~~~~~~~~~~g~~~r~~~~~~~~ 329 (338)
T 1np3_A 304 YRRNNAAHPIEQIGEKLRAMMPWIAA 329 (338)
T ss_dssp HHHHHHHSHHHHHHHHHHTTCTTC--
T ss_pred HHHHHhCCcHHHHHHHHHHhCccccc
Confidence 44 55899999999999999999984
No 4
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.97 E-value=9.1e-31 Score=258.00 Aligned_cols=220 Identities=16% Similarity=0.141 Sum_probs=187.7
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc---EEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecc
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI---VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~---~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd 188 (462)
+||+|||+|+||.+++++|.++ |+ +|++++|+.++..+.+++.|+.. ..++.++++++|+||+++||
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~------g~~~~~V~v~dr~~~~~~~l~~~~gi~~----~~~~~~~~~~aDvVilav~p 73 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIAN------GYDPNRICVTNRSLDKLDFFKEKCGVHT----TQDNRQGALNADVVVLAVKP 73 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHT------TCCGGGEEEECSSSHHHHHHHHTTCCEE----ESCHHHHHSSCSEEEECSCG
T ss_pred CEEEEEcccHHHHHHHHHHHHC------CCCCCeEEEEeCCHHHHHHHHHHcCCEE----eCChHHHHhcCCeEEEEeCH
Confidence 7999999999999999999999 87 78888776655444444468875 56889999999999999999
Q ss_pred hhHHHHHHHHHhc-CCCCcE-EEEeccchHHHhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceEEEeec
Q 012479 189 AAQADNYEKIFSC-MKPNSI-LGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (462)
Q Consensus 189 ~a~~~vl~eI~~~-Lk~gai-L~~a~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~aliav~ 266 (462)
+...+++++|.++ ++++++ |++++|+++..++. .++.+.+|+++|||+|... |+|++. +++.
T Consensus 74 ~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~~l~~---~l~~~~~vvr~mPn~p~~v------------~~g~~~-l~~~ 137 (280)
T 3tri_A 74 HQIKMVCEELKDILSETKILVISLAVGVTTPLIEK---WLGKASRIVRAMPNTPSSV------------RAGATG-LFAN 137 (280)
T ss_dssp GGHHHHHHHHHHHHHTTTCEEEECCTTCCHHHHHH---HHTCCSSEEEEECCGGGGG------------TCEEEE-EECC
T ss_pred HHHHHHHHHHHhhccCCCeEEEEecCCCCHHHHHH---HcCCCCeEEEEecCChHHh------------cCccEE-EEeC
Confidence 9999999999998 888865 67889998877765 5566678999999999887 478887 5668
Q ss_pred cCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHH----HHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 012479 267 QDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG----IVESLFRRFTENGMNEDLAYKNTVECI 342 (462)
Q Consensus 267 qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~pa----liea~~d~~v~~G~~~e~A~~~~~e~i 342 (462)
++.++++++.++.+++++|...++ ..+++++..++|+|++|+ ++|++.|.+++.|++|++|++++.|++
T Consensus 138 ~~~~~~~~~~v~~l~~~iG~~~~v-------~~E~~~d~~talsgsgpa~~~~~~eal~~a~v~~Gl~~~~a~~l~~~t~ 210 (280)
T 3tri_A 138 ETVDKDQKNLAESIMRAVGLVIWV-------SSEDQIEKIAALSGSGPAYIFLIMEALQEAAEQLGLTKETAELLTEQTV 210 (280)
T ss_dssp TTSCHHHHHHHHHHHGGGEEEEEC-------SSHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCeEEE-------CCHHHhhHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 889999999999999999963111 123468888999999998 679999999999999999999999999
Q ss_pred HHHHHHHHHHhcH--HHHHHhcCCc
Q 012479 343 TGIISKIISTQGM--LAVYNSFSGE 365 (462)
Q Consensus 343 ~Gli~~li~e~G~--~~m~~~vs~~ 365 (462)
.| +++|+.++|. ..++|+|+.+
T Consensus 211 ~G-~a~~~~~~~~~p~~l~~~v~sp 234 (280)
T 3tri_A 211 LG-AARMALETEQSVVQLRQFVTSP 234 (280)
T ss_dssp HH-HHHHHHTCSSCHHHHHHHHCCT
T ss_pred HH-HHHHHHhcCCCHHHHHHhccCC
Confidence 99 9999999996 8999999965
No 5
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.96 E-value=1.7e-28 Score=235.87 Aligned_cols=219 Identities=19% Similarity=0.279 Sum_probs=172.8
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc----EEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeec
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI----VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~----~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavp 187 (462)
+||+|||+|+||.+++++|.++ |+ +|++++|+.++..+.+++.|+.. ..++.|+++++|+||+++|
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~------g~~~~~~V~~~~r~~~~~~~~~~~~g~~~----~~~~~e~~~~aDvVilav~ 72 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK------NIVSSNQIICSDLNTANLKNASEKYGLTT----TTDNNEVAKNADILILSIK 72 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TSSCGGGEEEECSCHHHHHHHHHHHCCEE----CSCHHHHHHHCSEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHhC------CCCCCCeEEEEeCCHHHHHHHHHHhCCEE----eCChHHHHHhCCEEEEEeC
Confidence 7899999999999999999999 87 88877766444444444568875 5788999999999999999
Q ss_pred chhHHHHHHHHHhcCCCCcE-EEEeccchHHHhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceEEEeec
Q 012479 188 DAAQADNYEKIFSCMKPNSI-LGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (462)
Q Consensus 188 d~a~~~vl~eI~~~Lk~gai-L~~a~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~aliav~ 266 (462)
|+...++++++.++++++++ |++++|+++..+.+ .++.+.+++++||+.|... ++|... +++.
T Consensus 73 ~~~~~~v~~~l~~~l~~~~~vvs~~~gi~~~~l~~---~~~~~~~~v~~~p~~p~~~------------~~g~~~-~~~~ 136 (247)
T 3gt0_A 73 PDLYASIINEIKEIIKNDAIIVTIAAGKSIESTEN---AFNKKVKVVRVMPNTPALV------------GEGMSA-LCPN 136 (247)
T ss_dssp TTTHHHHC---CCSSCTTCEEEECSCCSCHHHHHH---HHCSCCEEEEEECCGGGGG------------TCEEEE-EEEC
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEecCCCCHHHHHH---HhCCCCcEEEEeCChHHHH------------cCceEE-EEeC
Confidence 99999999999999999986 45889998766654 4456678999999999876 367766 6667
Q ss_pred cCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHH----HHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 012479 267 QDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG----IVESLFRRFTENGMNEDLAYKNTVECI 342 (462)
Q Consensus 267 qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~pa----liea~~d~~v~~G~~~e~A~~~~~e~i 342 (462)
...+.++++.++.+++.+|.. +.. .++.++..+.++|++|+ ++|++.+.+++.|+++++|++.+.+++
T Consensus 137 ~~~~~~~~~~~~~l~~~~G~~--~~~------~e~~~d~~~a~~g~gpa~~~~~~eal~~a~~~~Gl~~~~a~~~~~~~~ 208 (247)
T 3gt0_A 137 EMVTEKDLEDVLNIFNSFGQT--EIV------SEKLMDVVTSVSGSSPAYVYMIIEAMADAAVLDGMPRNQAYKFAAQAV 208 (247)
T ss_dssp TTCCHHHHHHHHHHHGGGEEE--EEC------CGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCE--EEe------CHHHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 788999999999999999963 222 23467777899999997 789999999999999999999999999
Q ss_pred HHHHHHHHHHhcH--HHHHHhcCCc
Q 012479 343 TGIISKIISTQGM--LAVYNSFSGE 365 (462)
Q Consensus 343 ~Gli~~li~e~G~--~~m~~~vs~~ 365 (462)
.| +++|+.++|. ..|+|+||.+
T Consensus 209 ~g-s~~~~~~~~~~p~~l~~~v~sp 232 (247)
T 3gt0_A 209 LG-SAKMVLETGIHPGELKDMVCSP 232 (247)
T ss_dssp HH-HHHHHHHSCC------------
T ss_pred HH-HHHHHHHcCCCHHHHHHhcCCC
Confidence 99 8999999997 8999999964
No 6
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=99.91 E-value=7.7e-26 Score=235.24 Aligned_cols=130 Identities=18% Similarity=0.327 Sum_probs=114.4
Q ss_pred chhhhHhHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHhcCCcchhhhchhhccCchhH
Q 012479 302 IFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVECITGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSASYYPC 381 (462)
Q Consensus 302 lfgeqtvL~G~~paliea~~d~~v~~G~~~e~A~~~~~e~i~Gli~~li~e~G~~~m~~~vs~~~~aeyg~~~~~~~~~~ 381 (462)
-|+....++.++.++++++||++|++||+||.||++|+|+++ ||+++|+++|+.+|+++|| ||||||+|..+ ..+
T Consensus 354 ~f~~Gilmva~v~a~ve~~FEtlveaGy~pE~AYfE~LHElk-LIvdli~e~gl~~M~~sIS--dTAEYG~yl~~--~~~ 428 (491)
T 3ulk_A 354 YFDKGVLMIAMVKAGVELAFETMVDSGIIEESAYYESLHELP-LIANTIARKRLYEMNVVIS--DTAEYGNYLFS--YAC 428 (491)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHTTGGGHH-HHHHHHHHHHHHHHHHHSC--HHHHHHHHHHH--HHH
T ss_pred chhhhhHHHHHHHHHHhhhHHHHHHcCCcHHHHHHHHHhHHH-HHHHHHHHhhHHHHHhHhh--hHhhhcCEEec--HHH
Confidence 354443348899999999999999999999999999999999 9999999999999999999 79999999642 356
Q ss_pred HHHHHHHHHhccCChhhhHHHHhcccccccCCCCccc-c-hhhhcChhHHHhHHHHhcCCCCC
Q 012479 382 MEILYECYEDVAAGSEIRSVVLAGRRFYEKEGLPAFP-M-GKIDQTRMWKVGERVRSTRPAGD 442 (462)
Q Consensus 382 ~~~m~e~~~~i~~G~far~~~~~~~~~~~~~g~~~~~-~-~~i~~~~ie~vG~~lR~~~~~~~ 442 (462)
|..||+++++||+|.|+|++ .|++ .|.|.|+ + +++++|+||+||++||++|||+|
T Consensus 429 k~~mk~~l~~Iq~g~fak~~-~e~~-----~g~~~l~~~~~~~~~H~IE~VG~~LR~~M~wmk 485 (491)
T 3ulk_A 429 VPLLKPFMAELQPGDLGKAI-PEGA-----VDNGQLRDVNEAIRSHAIEQVGKKLRGYMTDMK 485 (491)
T ss_dssp HHHTHHHHHTCCTTSSSSCC-CCCC-----CCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCChHhhhh-hhcc-----CCCHHHHHHHHHHhCCChhHHHHHHHHhhHHHH
Confidence 77999999999999999995 5654 5778777 4 47799999999999999999997
No 7
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.91 E-value=3e-23 Score=207.57 Aligned_cols=218 Identities=14% Similarity=0.128 Sum_probs=173.7
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCC----cEEEEEecCCc-hhHHHHHHcCceecCCCcCCHhhhhccCCeEEEee
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD----IVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G----~~Vivg~r~~~-~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLav 186 (462)
+||+|||+|+||.++|.+|.++ | ++|++++|..+ ...+...+.|+.. ..++.++++++|+||+++
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~------G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~----~~~~~e~~~~aDvVilav 92 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAA------GVLAAHKIMASSPDMDLATVSALRKMGVKL----TPHNKETVQHSDVLFLAV 92 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHT------TSSCGGGEEEECSCTTSHHHHHHHHHTCEE----ESCHHHHHHHCSEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCCcceEEEECCCccHHHHHHHHHcCCEE----eCChHHHhccCCEEEEEe
Confidence 7899999999999999999998 8 67887776643 2455556678875 467889999999999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEe-ccchHHHhhhccccCC---CCccEEecccCCCchhhHHhhhcCccccCCCceEE
Q 012479 187 SDAAQADNYEKIFSCMKPNSILGLS-HGFLLGHLQSMGLDFP---KNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSS 262 (462)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~gaiL~~a-~G~~i~~~~~~~i~~p---~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~al 262 (462)
||++..+++++|.+.++++++|+++ .|+.+..+.+ .++ .+.+|++.||+.|... ++|...
T Consensus 93 ~~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~~l~~---~l~~~~~~~~vv~~~p~~p~~~------------~~g~~v- 156 (322)
T 2izz_A 93 KPHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEK---KLSAFRPAPRVIRCMTNTPVVV------------REGATV- 156 (322)
T ss_dssp CGGGHHHHHHHHGGGCCTTCEEEECCTTCCHHHHHH---HHHTTSSCCEEEEEECCGGGGG------------TCEEEE-
T ss_pred CHHHHHHHHHHHHhhcCCCCEEEEeCCCCCHHHHHH---HHhhcCCCCeEEEEeCCcHHHH------------cCCeEE-
Confidence 9999999999999999999987654 6887654432 111 2458999999998766 256644
Q ss_pred EeeccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHH----HHHHHHHHHHHcCCCHHHHHHHH
Q 012479 263 FAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG----IVESLFRRFTENGMNEDLAYKNT 338 (462)
Q Consensus 263 iav~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~pa----liea~~d~~v~~G~~~e~A~~~~ 338 (462)
++..++.+.++.+.+..+++.+|.. +. ..+|+++..+.++|++|+ +++++.+.+++.|++++.++.++
T Consensus 157 ~~~g~~~~~~~~~~v~~ll~~~G~~--~~------~~e~~~~~~~a~~g~gpa~~~~~~eala~a~~~~Gl~~~~a~~l~ 228 (322)
T 2izz_A 157 YATGTHAQVEDGRLMEQLLSSVGFC--TE------VEEDLIDAVTGLSGSGPAYAFTALDALADGGVKMGLPRRLAVRLG 228 (322)
T ss_dssp EEECTTCCHHHHHHHHHHHHTTEEE--EE------CCGGGHHHHHHHTTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHhCCCE--EE------eCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 5556777889999999999999953 11 124577888899998887 68999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcH--HHHHHhcCC
Q 012479 339 VECITGIISKIISTQGM--LAVYNSFSG 364 (462)
Q Consensus 339 ~e~i~Gli~~li~e~G~--~~m~~~vs~ 364 (462)
.+++.| .++++.+.|. ..+++.++.
T Consensus 229 ~~~~~g-~~~~~~~~~~~p~~l~~~v~s 255 (322)
T 2izz_A 229 AQALLG-AAKMLLHSEQHPGQLKDNVSS 255 (322)
T ss_dssp HHHHHH-HHHHHHHCSSCHHHHHHHHCC
T ss_pred HHHHHH-HHHHHHhcCCCHHHHHHhCCC
Confidence 999998 7788877764 668888864
No 8
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.87 E-value=2.7e-21 Score=185.69 Aligned_cols=210 Identities=13% Similarity=0.202 Sum_probs=163.8
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCC----cEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeec
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD----IVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G----~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavp 187 (462)
+||+|||+|+||.+++.+|.++ | ++|.+++|+.++ .|+.. ..+..++++++|+||+++|
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~------g~~~~~~v~~~~~~~~~-------~g~~~----~~~~~~~~~~~D~vi~~v~ 67 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA------NIIKKENLFYYGPSKKN-------TTLNY----MSSNEELARHCDIIVCAVK 67 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH------TSSCGGGEEEECSSCCS-------SSSEE----CSCHHHHHHHCSEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCCCCCeEEEEeCCccc-------CceEE----eCCHHHHHhcCCEEEEEeC
Confidence 7899999999999999999998 8 578777765443 57764 5678899999999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEeccchHHHhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceEEEeecc
Q 012479 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ 267 (462)
Q Consensus 188 d~a~~~vl~eI~~~Lk~gaiL~~a~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~aliav~q 267 (462)
++...++++++.++++++.+|+++.|+....+.+ .++.+.++++++|+.|... ++| ..+++...
T Consensus 68 ~~~~~~v~~~l~~~l~~~~vv~~~~gi~~~~l~~---~~~~~~~~v~~~p~~p~~~------------~~g-~~~~~~~~ 131 (262)
T 2rcy_A 68 PDIAGSVLNNIKPYLSSKLLISICGGLNIGKLEE---MVGSENKIVWVMPNTPCLV------------GEG-SFIYCSNK 131 (262)
T ss_dssp TTTHHHHHHHSGGGCTTCEEEECCSSCCHHHHHH---HHCTTSEEEEEECCGGGGG------------TCE-EEEEEECT
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHH---HhCCCCcEEEECCChHHHH------------cCC-eEEEEeCC
Confidence 9999999999999885555678899998765554 3455557889999888765 367 55567677
Q ss_pred CCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHH----HHHHHHHHHHHcCCCHHHHHHHHHHHHH
Q 012479 268 DVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG----IVESLFRRFTENGMNEDLAYKNTVECIT 343 (462)
Q Consensus 268 d~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~pa----liea~~d~~v~~G~~~e~A~~~~~e~i~ 343 (462)
+.+.+..+.+..+++.+|. ++.. ..+.++..++++++.|+ +++++.+.+++.|++++.++....+++.
T Consensus 132 ~~~~~~~~~~~~ll~~~G~--~~~~------~~~~~~~~~a~~~~~~~~~~~~~~al~~~~~~~Gl~~~~~~~~~~~~~~ 203 (262)
T 2rcy_A 132 NVNSTDKKYVNDIFNSCGI--IHEI------KEKDMDIATAISGCGPAYVYLFIESLIDAGVKNGLSRELSKNLVLQTIK 203 (262)
T ss_dssp TCCHHHHHHHHHHHHTSEE--EEEC------CGGGHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCC--EEEe------CHHHccHHHHHHccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 7788999999999999994 3322 22357777888887775 7888888899999999999999999888
Q ss_pred HHHHHHHHHhcH--HHHHHhcC
Q 012479 344 GIISKIISTQGM--LAVYNSFS 363 (462)
Q Consensus 344 Gli~~li~e~G~--~~m~~~vs 363 (462)
| +.++..+.+. ..++|.++
T Consensus 204 ~-~~~~~~~~~~~~~~l~d~~~ 224 (262)
T 2rcy_A 204 G-SVEMVKKSDQPVQQLKDNIV 224 (262)
T ss_dssp H-HHHHHHHCSSCHHHHHHHHC
T ss_pred H-HHHHHHhcCCCHHHHHHhcC
Confidence 7 6666665443 44455554
No 9
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.87 E-value=3.9e-21 Score=184.64 Aligned_cols=215 Identities=13% Similarity=0.179 Sum_probs=168.1
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCC-cEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecchh
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G-~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~a 190 (462)
|||+|||+|+||.++|.+|.+. | ++|.+++|+.++..+.+...|+.. ..+..+++ ++|+||+++|+..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~------g~~~v~~~~r~~~~~~~~~~~~g~~~----~~~~~~~~-~~D~vi~~v~~~~ 69 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQ------GGYRIYIANRGAEKRERLEKELGVET----SATLPELH-SDDVLILAVKPQD 69 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------CSCEEEEECSSHHHHHHHHHHTCCEE----ESSCCCCC-TTSEEEECSCHHH
T ss_pred CEEEEECchHHHHHHHHHHHHC------CCCeEEEECCCHHHHHHHHHhcCCEE----eCCHHHHh-cCCEEEEEeCchh
Confidence 5899999999999999999998 8 888777665444333344458764 45677888 9999999999888
Q ss_pred HHHHHHHHHhcCCCCcEEEEe-ccchHHHhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceEEEeeccCC
Q 012479 191 QADNYEKIFSCMKPNSILGLS-HGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDV 269 (462)
Q Consensus 191 ~~~vl~eI~~~Lk~gaiL~~a-~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~aliav~qd~ 269 (462)
..++++++.+ + +++|++. +|+....+.+ .++.+.++++.+|+.|... +.|... +.+..+.
T Consensus 70 ~~~v~~~l~~--~-~~ivv~~~~g~~~~~l~~---~~~~~~~~v~~~~~~~~~~------------~~g~~~-i~~~~~~ 130 (263)
T 1yqg_A 70 MEAACKNIRT--N-GALVLSVAAGLSVGTLSR---YLGGTRRIVRVMPNTPGKI------------GLGVSG-MYAEAEV 130 (263)
T ss_dssp HHHHHTTCCC--T-TCEEEECCTTCCHHHHHH---HTTSCCCEEEEECCGGGGG------------TCEEEE-EECCTTS
T ss_pred HHHHHHHhcc--C-CCEEEEecCCCCHHHHHH---HcCCCCcEEEEcCCHHHHH------------cCceEE-EEcCCCC
Confidence 8888887766 5 8877766 7887655554 4455678999999988765 357776 4556667
Q ss_pred CHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHH----HHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q 012479 270 DGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG----IVESLFRRFTENGMNEDLAYKNTVECITGI 345 (462)
Q Consensus 270 tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~pa----liea~~d~~v~~G~~~e~A~~~~~e~i~Gl 345 (462)
+.+..+.+..+++.+|.. + .. . +.|.++..++++|+.|+ +++++.|.+++.|++++.++.++.+++.|
T Consensus 131 ~~~~~~~~~~l~~~~g~~-~-~~---~--~~~~~~~~~al~g~~~~~~~~~~~~l~e~~~~~G~~~~~~~~~~~~~~~~- 202 (263)
T 1yqg_A 131 SETDRRIADRIMKSVGLT-V-WL---D--DEEKMHGITGISGSGPAYVFYLLDALQNAAIRQGFDMAEARALSLATFKG- 202 (263)
T ss_dssp CHHHHHHHHHHHHTTEEE-E-EC---S--STTHHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHhCCCE-E-Ee---C--ChhhccHHHHHHccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-
Confidence 889999999999999953 1 22 1 13478888999888886 67788889999999999999999999998
Q ss_pred HHHHHHHhc--HHHHHHhcCC
Q 012479 346 ISKIISTQG--MLAVYNSFSG 364 (462)
Q Consensus 346 i~~li~e~G--~~~m~~~vs~ 364 (462)
..+++.++| ...+++.++.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~ 223 (263)
T 1yqg_A 203 AVALAEQTGEDFEKLQKNVTS 223 (263)
T ss_dssp HHHHHHHHCCCHHHHHHHTCC
T ss_pred HHHHHHhcCCCHHHHHHhcCC
Confidence 788999888 6678888764
No 10
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.87 E-value=6.8e-21 Score=183.11 Aligned_cols=215 Identities=16% Similarity=0.152 Sum_probs=165.1
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecchh
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~a 190 (462)
++||+|||+|+||.+++.+|.+. |.+|.+++++.++..+.+++.|+.. ..+.+++++++|+||+++|+..
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~------g~~v~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~D~Vi~~v~~~~ 72 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQT------PHELIISGSSLERSKEIAEQLALPY----AMSHQDLIDQVDLVILGIKPQL 72 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTS------SCEEEEECSSHHHHHHHHHHHTCCB----CSSHHHHHHTCSEEEECSCGGG
T ss_pred ccEEEEECCCHHHHHHHHHHHhC------CCeEEEECCCHHHHHHHHHHcCCEe----eCCHHHHHhcCCEEEEEeCcHh
Confidence 47999999999999999999988 8887776665444334444457764 5688899999999999999988
Q ss_pred HHHHHHHHHhcCCCCcEEEEe-ccchHHHhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceEEEeeccCC
Q 012479 191 QADNYEKIFSCMKPNSILGLS-HGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDV 269 (462)
Q Consensus 191 ~~~vl~eI~~~Lk~gaiL~~a-~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~aliav~qd~ 269 (462)
+.+++.++ ++|++|+.. .|++...+.+ .++.+.++++.+|+.|... ++|... +++....
T Consensus 73 ~~~v~~~l----~~~~~vv~~~~~~~~~~l~~---~~~~~~~~v~~~p~~~~~~------------~~g~~~-i~~~~~~ 132 (259)
T 2ahr_A 73 FETVLKPL----HFKQPIISMAAGISLQRLAT---FVGQDLPLLRIMPNMNAQI------------LQSSTA-LTGNALV 132 (259)
T ss_dssp HHHHHTTS----CCCSCEEECCTTCCHHHHHH---HHCTTSCEEEEECCGGGGG------------TCEEEE-EEECTTC
T ss_pred HHHHHHHh----ccCCEEEEeCCCCCHHHHHH---hcCCCCCEEEEcCCchHHH------------cCceEE-EEcCCCC
Confidence 87777654 477776655 6787665544 3344568999999988765 357555 5566667
Q ss_pred CHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHH----HHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q 012479 270 DGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG----IVESLFRRFTENGMNEDLAYKNTVECITGI 345 (462)
Q Consensus 270 tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~pa----liea~~d~~v~~G~~~e~A~~~~~e~i~Gl 345 (462)
+.+..+.++.+++.+|. ++... + +.++..+.|+|++|+ +++++.|.+++.|++++.++....+++.|
T Consensus 133 ~~~~~~~~~~ll~~~G~--~~~~~---~---~~~d~~~al~g~~~~~~~~~~~~la~~~~~~Gl~~~~~~~~~~~~~~~- 203 (259)
T 2ahr_A 133 SQELQARVRDLTDSFGS--TFDIS---E---KDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLA- 203 (259)
T ss_dssp CHHHHHHHHHHHHTTEE--EEECC---G---GGHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHhCCC--EEEec---H---HHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-
Confidence 88999999999999993 33332 2 356777888887775 78999999999999999999999999998
Q ss_pred HHHHHHHhc--HHHHHHhcCC
Q 012479 346 ISKIISTQG--MLAVYNSFSG 364 (462)
Q Consensus 346 i~~li~e~G--~~~m~~~vs~ 364 (462)
..+++.+.| -..+++.++.
T Consensus 204 ~~~~~~~~~~~p~~l~~~~~~ 224 (259)
T 2ahr_A 204 SASNLKTSSQSPHDFIDAICS 224 (259)
T ss_dssp HHHHHHHSSSCHHHHHHHHCC
T ss_pred HHHHHHhcCCCHHHHHHhCCC
Confidence 788888888 4666677753
No 11
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.83 E-value=1.6e-20 Score=188.23 Aligned_cols=209 Identities=12% Similarity=0.019 Sum_probs=155.0
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc--EEEEEecCCchhHHHHHHcCceecCCCcCCHhh-hhccCCeEEEeecc
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYE-TISGSDLVLLLISD 188 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~--~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~e-av~~ADvViLavpd 188 (462)
+||+|||+|+||.++|++|+++ |+ +|+++++ +....+.+.+.|+. +....++++ ++++||+||+++|+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~------G~~~~V~~~dr-~~~~~~~a~~~G~~--~~~~~~~~~~~~~~aDvVilavp~ 104 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS------GFKGKIYGYDI-NPESISKAVDLGII--DEGTTSIAKVEDFSPDFVMLSSPV 104 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT------TCCSEEEEECS-CHHHHHHHHHTTSC--SEEESCTTGGGGGCCSEEEECSCG
T ss_pred CEEEEEeeCHHHHHHHHHHHhC------CCCCEEEEEEC-CHHHHHHHHHCCCc--chhcCCHHHHhhccCCEEEEeCCH
Confidence 8999999999999999999999 88 7766554 45567788888884 112467788 89999999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEeccch---HHHhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceEEEee
Q 012479 189 AAQADNYEKIFSCMKPNSILGLSHGFL---LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (462)
Q Consensus 189 ~a~~~vl~eI~~~Lk~gaiL~~a~G~~---i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~aliav 265 (462)
....++++++.++++++++|+++++++ +..+.+ .+|. +||..||+..... ..+...+..++.|.++++++
T Consensus 105 ~~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~---~l~~--~~v~~hPm~G~e~--sG~~~A~~~Lf~g~~~il~~ 177 (314)
T 3ggo_A 105 RTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLEN---ILGK--RFVGGHPIAGTEK--SGVEYSLDNLYEGKKVILTP 177 (314)
T ss_dssp GGHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHH---HHGG--GEECEEECCCCCC--CSGGGCCTTTTTTCEEEECC
T ss_pred HHHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHH---hcCC--CEEecCcccCCcc--cchhhhhhhhhcCCEEEEEe
Confidence 999999999999999999999998875 233332 2333 8999999753211 00111122233578888999
Q ss_pred ccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHH
Q 012479 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIV-ESLFRRFTENGMNEDLAYKNTVECIT 343 (462)
Q Consensus 266 ~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~pali-ea~~d~~v~~G~~~e~A~~~~~e~i~ 343 (462)
++..+.++++.++.+++.+|. .++.++.+++ +..+.+.+.+|.++ -++.+.+.+.+.+++++..++.....
T Consensus 178 ~~~~~~~~~~~v~~l~~~~G~-~v~~~~~~~h------D~~~a~~s~lph~~a~~l~~~~~~~~~~~~~~~~~a~~~fr 249 (314)
T 3ggo_A 178 TKKTDKKRLKLVKRVWEDVGG-VVEYMSPELH------DYVFGVVSHLPHAVAFALVDTLIHMSTPEVDLFKYPGGGFK 249 (314)
T ss_dssp CTTSCHHHHHHHHHHHHHTTC-EEEECCHHHH------HHHHHHHTHHHHHHHHHHHHHHHHHCCSSCCGGGCCTTTTT
T ss_pred CCCCCHHHHHHHHHHHHHcCC-EEEEcCHHHH------HHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHhhccccHH
Confidence 888899999999999999996 4555543333 35577888999865 66677777888777776665555444
No 12
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.83 E-value=4.3e-19 Score=173.59 Aligned_cols=213 Identities=14% Similarity=0.089 Sum_probs=153.3
Q ss_pred CCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecch
Q 012479 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (462)
Q Consensus 111 ikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~ 189 (462)
|+||+|||+ |+||.++|.+|.+. |++|++++|. .+..+.+.+.|+. ..+..++++++|+||+++|+.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~------g~~V~~~~r~-~~~~~~~~~~g~~-----~~~~~~~~~~aDvVi~av~~~ 78 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDS------AHHLAAIEIA-PEGRDRLQGMGIP-----LTDGDGWIDEADVVVLALPDN 78 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHS------SSEEEEECCS-HHHHHHHHHTTCC-----CCCSSGGGGTCSEEEECSCHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC------CCEEEEEECC-HHHHHHHHhcCCC-----cCCHHHHhcCCCEEEEcCCch
Confidence 379999999 99999999999998 9988776654 4445555557755 346778899999999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEEEe-ccchHHHhhhccccCCCCccEEecccCCCchhh----HHhhhcCccccCCC------
Q 012479 190 AQADNYEKIFSCMKPNSILGLS-HGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSV----RRLYVQGKEINGAG------ 258 (462)
Q Consensus 190 a~~~vl~eI~~~Lk~gaiL~~a-~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~v----r~lf~~G~~~~G~G------ 258 (462)
...++++++.++++++++|++. .|..+..+.+ . .++.+|++.||+.|+.-. ...+ +|
T Consensus 79 ~~~~v~~~l~~~l~~~~ivv~~s~~~~~~~l~~---~-~~~~~~v~~~P~~~~~~~~~~~~~~~--------~g~l~~~~ 146 (286)
T 3c24_A 79 IIEKVAEDIVPRVRPGTIVLILDAAAPYAGVMP---E-RADITYFIGHPCHPPLFNDETDPAAR--------TDYHGGIA 146 (286)
T ss_dssp HHHHHHHHHGGGSCTTCEEEESCSHHHHHTCSC---C-CTTSEEEEEEECCSCSSCCCCSHHHH--------TCSSSSSS
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCCchhHHHHh---h-hCCCeEEecCCCCccccccccchhhc--------cCcccccc
Confidence 9999999999999999987754 4454544432 2 346789999999887610 0112 45
Q ss_pred -ceEEEeeccCCCHHHHHHHHHHHHHhCCC--cccccchhhhccccchh-hhH--hHHhHHHHHHHHHHHHHHHcCCCHH
Q 012479 259 -INSSFAVHQDVDGRATNVALGWSVALGSP--FTFATTLEQEYRSDIFG-ERG--ILLGAVHGIVESLFRRFTENGMNED 332 (462)
Q Consensus 259 -v~aliav~qd~tgea~e~a~al~~aiG~~--~viettf~~E~~~dlfg-eqt--vL~G~~paliea~~d~~v~~G~~~e 332 (462)
.+.+++.. ..+++..+.+..+++.+|.+ +++..+ +...|.++ ... ..++.+-+++|++.+.+++.|++++
T Consensus 147 ~~~~i~~~~-~~~~~~~~~v~~l~~~~G~~~~~~~~v~---~~~~~~~~~a~~n~~~~~~~~~~~eal~~~~~~~Gl~~~ 222 (286)
T 3c24_A 147 KQAIVCALM-QGPEEHYAIGADICETMWSPVTRTHRVT---TEQLAILEPGLSEMVAMPFVETMVHAVDECADRYGIDRQ 222 (286)
T ss_dssp CEEEEEEEE-ESCTHHHHHHHHHHHHHTCSEEEEEECC---HHHHHHHTTHHHHTTHHHHHHHHHHHHHHHHHHHCCCHH
T ss_pred cceeeeecc-CCCHHHHHHHHHHHHHhcCCcceEEEeC---hhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 35543333 36788999999999999973 344442 33444442 211 1233344588999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 012479 333 LAYKNTVECITGIISKIIST 352 (462)
Q Consensus 333 ~A~~~~~e~i~Gli~~li~e 352 (462)
+++.++.+++.| +++++.+
T Consensus 223 ~~~~~~~~~~~~-~~~~~~~ 241 (286)
T 3c24_A 223 AALDFMIGHLNV-EIAMWFG 241 (286)
T ss_dssp HHHHHHHHHHHH-HHHHHTT
T ss_pred HHHHHHHHHHHH-HHHHHHh
Confidence 999999999887 5655533
No 13
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.83 E-value=1.7e-20 Score=182.42 Aligned_cols=222 Identities=13% Similarity=0.069 Sum_probs=161.8
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCc--EEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhc-cCCeEEEeec
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLLIS 187 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~--~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~-~ADvViLavp 187 (462)
|+||+|||+|+||.++|++|++. |+ +|++.++ +.+..+.+.+.|+.. ....+++++++ ++|+||+++|
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~------g~~~~V~~~d~-~~~~~~~~~~~g~~~--~~~~~~~~~~~~~aDvVilavp 71 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRS------GFKGKIYGYDI-NPESISKAVDLGIID--EGTTSIAKVEDFSPDFVMLSSP 71 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHT------TCCSEEEEECS-CHHHHHHHHHTTSCS--EEESCGGGGGGTCCSEEEECSC
T ss_pred CcEEEEEecCHHHHHHHHHHHhc------CCCcEEEEEeC-CHHHHHHHHHCCCcc--cccCCHHHHhcCCCCEEEEcCC
Confidence 47999999999999999999998 87 7766554 445566677788741 11357788999 9999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEeccchH---HHhhhccccCCCCccEEecccCC------CchhhHHhhhcCccccCCC
Q 012479 188 DAAQADNYEKIFSCMKPNSILGLSHGFLL---GHLQSMGLDFPKNIGVIAVCPKG------MGPSVRRLYVQGKEINGAG 258 (462)
Q Consensus 188 d~a~~~vl~eI~~~Lk~gaiL~~a~G~~i---~~~~~~~i~~p~~v~VV~v~Png------pg~~vr~lf~~G~~~~G~G 258 (462)
+....++++++.++++++++|+++++.+. ..+.+ .+++ .++..||.. |++...++ +.|
T Consensus 72 ~~~~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~---~l~~--~~v~~~p~~~~~~~gp~~a~~~l--------~~g 138 (281)
T 2g5c_A 72 VRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLEN---ILGK--RFVGGHPIAGTEKSGVEYSLDNL--------YEG 138 (281)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHH---HHGG--GEECEEEECCCSCCSGGGCCSST--------TTT
T ss_pred HHHHHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHH---hccc--cceeeccccCCccCChhhhhhHH--------hCC
Confidence 99999999999999999999998887643 22322 2233 266666643 33332222 357
Q ss_pred ceEEEeeccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHHH-HHHHHHHHHHcCCCHHHHHHH
Q 012479 259 INSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGI-VESLFRRFTENGMNEDLAYKN 337 (462)
Q Consensus 259 v~aliav~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~pal-iea~~d~~v~~G~~~e~A~~~ 337 (462)
.+++++++...+.++.+.+..+++.+|.. ++.++.. ..++.+.++|.+|.+ .-++.+.+.+.|++++.++.+
T Consensus 139 ~~~~~~~~~~~~~~~~~~v~~l~~~~g~~-~~~~~~~------~~d~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l 211 (281)
T 2g5c_A 139 KKVILTPTKKTDKKRLKLVKRVWEDVGGV-VEYMSPE------LHDYVFGVVSHLPHAVAFALVDTLIHMSTPEVDLFKY 211 (281)
T ss_dssp CEEEECCCSSSCHHHHHHHHHHHHHTTCE-EEECCHH------HHHHHHHHHTHHHHHHHHHHHHHHHHHCBTTBCGGGC
T ss_pred CCEEEecCCCCCHHHHHHHHHHHHHcCCE-EEEcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhh
Confidence 88889988888899999999999999973 3333211 234668899999986 477888888889999999998
Q ss_pred HHHHHHHHHHHHHHHhcHHHHHHhcC
Q 012479 338 TVECITGIISKIISTQGMLAVYNSFS 363 (462)
Q Consensus 338 ~~e~i~Gli~~li~e~G~~~m~~~vs 363 (462)
+.+.+.+ ++++.. .-...++|.++
T Consensus 212 ~~~~~~~-~~r~~~-~~p~~~~~~~~ 235 (281)
T 2g5c_A 212 PGGGFKD-FTRIAK-SDPIMWRDIFL 235 (281)
T ss_dssp CTTTGGG-C---CC-SCHHHHHHHHH
T ss_pred ccccHHH-HhHHhc-CCHHHHHHHHH
Confidence 8888876 566553 33455555554
No 14
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.82 E-value=8.4e-20 Score=178.27 Aligned_cols=227 Identities=12% Similarity=0.076 Sum_probs=163.2
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecchh
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~a 190 (462)
++||+|||+|+||.++|.+|.+. |.|++|++.++ +....+.+.+.|... ....+++++++++|+||+++|+..
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~----g~~~~V~~~d~-~~~~~~~~~~~g~~~--~~~~~~~~~~~~aDvVilavp~~~ 78 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD----HPHYKIVGYNR-SDRSRDIALERGIVD--EATADFKVFAALADVIILAVPIKK 78 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH----CTTSEEEEECS-SHHHHHHHHHTTSCS--EEESCTTTTGGGCSEEEECSCHHH
T ss_pred cceEEEEeeCHHHHHHHHHHHhC----CCCcEEEEEcC-CHHHHHHHHHcCCcc--cccCCHHHhhcCCCEEEEcCCHHH
Confidence 38999999999999999999987 22357765554 444556666677631 114577888999999999999999
Q ss_pred HHHHHHHHHhc-CCCCcEEEEeccchH---HHhhhccccCCC-CccEEecccC------CCchhhHHhhhcCccccCCCc
Q 012479 191 QADNYEKIFSC-MKPNSILGLSHGFLL---GHLQSMGLDFPK-NIGVIAVCPK------GMGPSVRRLYVQGKEINGAGI 259 (462)
Q Consensus 191 ~~~vl~eI~~~-Lk~gaiL~~a~G~~i---~~~~~~~i~~p~-~v~VV~v~Pn------gpg~~vr~lf~~G~~~~G~Gv 259 (462)
+.++++++.++ ++++++|+++++.+. ..+.+ .+++ .++++..||. +|+....++| +|.
T Consensus 79 ~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~---~l~~~~~~~v~~~P~~g~~~~g~~~a~~~l~--------~g~ 147 (290)
T 3b1f_A 79 TIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEY---YLKDKPVQFVGSHPMAGSHKSGAVAANVNLF--------ENA 147 (290)
T ss_dssp HHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHH---HHTTSSCEEEEEEEC-----CCTTSCCTTTT--------TTS
T ss_pred HHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHH---hccccCCEEEEeCCcCCCCcchHHHhhHHHh--------CCC
Confidence 99999999999 999999988887654 33333 3343 6788888998 6666544444 468
Q ss_pred eEEEeeccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Q 012479 260 NSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTV 339 (462)
Q Consensus 260 ~aliav~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~paliea~~d~~v~~G~~~e~A~~~~~ 339 (462)
+++++++...+.++.+.+..+++.+|.. ++.++.+++ |.. .+.++++.|.+.-++.+.+.+.|++++.++.++.
T Consensus 148 ~~~~~~~~~~~~~~~~~v~~l~~~~G~~-~~~~~~~~~---d~~--~a~~s~~~~~~a~~~~~~~~~~g~~~~~~~~la~ 221 (290)
T 3b1f_A 148 YYIFSPSCLTKPNTIPALQDLLSGLHAR-YVEIDAAEH---DCV--TSQISHFPHIIASSLMKQAGDFSESHEMTKHFAA 221 (290)
T ss_dssp EEEEEECTTCCTTHHHHHHHHTGGGCCE-EEECCHHHH---HHH--HHHHTHHHHHHHHHHHHHHHHHHHHCTHHHHHCC
T ss_pred eEEEecCCCCCHHHHHHHHHHHHHcCCE-EEEcCHHHH---HHH--HHHHhhHHHHHHHHHHHHHHhcccchhhHHhhcc
Confidence 8888888878889999999999999973 433332222 211 2556777776655666666667888889999999
Q ss_pred HHHHHHHHHHHHHhcHHHHHHhcC
Q 012479 340 ECITGIISKIISTQGMLAVYNSFS 363 (462)
Q Consensus 340 e~i~Gli~~li~e~G~~~m~~~vs 363 (462)
+++.+ ++++. ..--..++|.++
T Consensus 222 ~~~~~-~~rla-~~~p~~~~~~~~ 243 (290)
T 3b1f_A 222 GGFRD-MTRIA-ESEPGMWTSILL 243 (290)
T ss_dssp HHHHH-TTGGG-GSCHHHHHHHHH
T ss_pred ccHHh-hhhhh-cCCHHHHHHHHH
Confidence 99987 56555 333344466654
No 15
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.81 E-value=4.1e-19 Score=180.60 Aligned_cols=204 Identities=12% Similarity=0.076 Sum_probs=148.2
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhcc----CCeEEEeec
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISG----SDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~----ADvViLavp 187 (462)
+||+|||+|+||.++|++|+++ |++|+++++ +....+.+.+.|+.. ..++++++++ +|+||+++|
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~------G~~V~~~dr-~~~~~~~a~~~G~~~----~~~~~e~~~~a~~~aDlVilavP 77 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA------NHSVFGYNR-SRSGAKSAVDEGFDV----SADLEATLQRAAAEDALIVLAVP 77 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEECS-CHHHHHHHHHTTCCE----ESCHHHHHHHHHHTTCEEEECSC
T ss_pred CEEEEEeecHHHHHHHHHHHHC------CCEEEEEeC-CHHHHHHHHHcCCee----eCCHHHHHHhcccCCCEEEEeCC
Confidence 7899999999999999999999 988876654 455677888889864 4677777764 799999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEeccchHH---HhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceEEEe
Q 012479 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (462)
Q Consensus 188 d~a~~~vl~eI~~~Lk~gaiL~~a~G~~i~---~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~alia 264 (462)
+....++++++.++ ++|++|+++++++.. .+.. .++ +++||..||+..... ..+..+...+++|.+++++
T Consensus 78 ~~~~~~vl~~l~~~-~~~~iv~Dv~Svk~~i~~~~~~---~~~-~~~~v~~HPmaG~e~--sG~~aa~~~Lf~g~~~ilt 150 (341)
T 3ktd_A 78 MTAIDSLLDAVHTH-APNNGFTDVVSVKTAVYDAVKA---RNM-QHRYVGSHPMAGTAN--SGWSASMDGLFKRAVWVVT 150 (341)
T ss_dssp HHHHHHHHHHHHHH-CTTCCEEECCSCSHHHHHHHHH---TTC-GGGEECEEECCSCC---CCGGGCCSSTTTTCEEEEC
T ss_pred HHHHHHHHHHHHcc-CCCCEEEEcCCCChHHHHHHHH---hCC-CCcEecCCccccccc--cchhhhhhHHhcCCeEEEE
Confidence 99989999999886 899999999998643 2332 233 578999999742210 1222233345568899999
Q ss_pred eccCCCHH--------HHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHHHHHH-HHHHHHHcCCCHHHHH
Q 012479 265 VHQDVDGR--------ATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVES-LFRRFTENGMNEDLAY 335 (462)
Q Consensus 265 v~qd~tge--------a~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~paliea-~~d~~v~~G~~~e~A~ 335 (462)
+..+.+.+ +++.++.+++.+|+ +++..+.++|+ ..+++++.+|.++-. +.+.+.+ .++.+.
T Consensus 151 p~~~~~~e~~~~~~~~~~~~v~~l~~~~Ga-~v~~~~~~~HD------~~~A~vshlPh~ia~aL~~~~~~---~~~~~~ 220 (341)
T 3ktd_A 151 FDQLFDGTDINSTWISIWKDVVQMALAVGA-EVVPSRVGPHD------AAAARVSHLTHILAETLAIVGDN---GGALSL 220 (341)
T ss_dssp CGGGTSSCCCCHHHHHHHHHHHHHHHHTTC-EEEECCHHHHH------HHHHHHTHHHHHHHHHHHHHHHH---THHHHH
T ss_pred eCCCCChhhhccchHHHHHHHHHHHHHcCC-EEEEeCHHHHH------HHHHHHhHHHHHHHHHHHHHhhc---chHHHH
Confidence 98887777 99999999999997 45555544443 568888999985544 3444322 244555
Q ss_pred HHHHHHHH
Q 012479 336 KNTVECIT 343 (462)
Q Consensus 336 ~~~~e~i~ 343 (462)
.++.....
T Consensus 221 ~laa~gfr 228 (341)
T 3ktd_A 221 SLAAGSYR 228 (341)
T ss_dssp HHCCHHHH
T ss_pred HHccccHH
Confidence 55554444
No 16
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.78 E-value=4.2e-18 Score=168.49 Aligned_cols=206 Identities=13% Similarity=0.054 Sum_probs=151.5
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecchh
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~a 190 (462)
+||+||| +|+||.++|++|++. |++|++.++... .+..+++++||+||++||+..
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~------G~~V~~~~~~~~------------------~~~~~~~~~aDvVilavp~~~ 77 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS------GYPISILDREDW------------------AVAESILANADVVIVSVPINL 77 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT------TCCEEEECTTCG------------------GGHHHHHTTCSEEEECSCGGG
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC------CCeEEEEECCcc------------------cCHHHHhcCCCEEEEeCCHHH
Confidence 7999999 999999999999998 988877765422 135678899999999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEEeccchHHHhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceEEEeeccCCC
Q 012479 191 QADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVD 270 (462)
Q Consensus 191 ~~~vl~eI~~~Lk~gaiL~~a~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~aliav~qd~t 270 (462)
..++++++.++++++++|++++|++....+......+ .+++..||.. ++.. .. ..|.+++++++. +
T Consensus 78 ~~~vl~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~~--~~~v~~hP~~-g~~~-~~--------~~g~~~~l~~~~--~ 143 (298)
T 2pv7_A 78 TLETIERLKPYLTENMLLADLTSVKREPLAKMLEVHT--GAVLGLHPMF-GADI-AS--------MAKQVVVRCDGR--F 143 (298)
T ss_dssp HHHHHHHHGGGCCTTSEEEECCSCCHHHHHHHHHHCS--SEEEEEEECS-CTTC-SC--------CTTCEEEEEEEE--C
T ss_pred HHHHHHHHHhhcCCCcEEEECCCCCcHHHHHHHHhcC--CCEEeeCCCC-CCCc-hh--------hcCCeEEEecCC--C
Confidence 9999999999999999999999886432221001222 5788889863 2221 12 246677788765 6
Q ss_pred HHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHH---H
Q 012479 271 GRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIV-ESLFRRFTENGMNEDLAYKNTVECITGI---I 346 (462)
Q Consensus 271 gea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~pali-ea~~d~~v~~G~~~e~A~~~~~e~i~Gl---i 346 (462)
.++++.+..+++.+|.. ++.++.+ ..+..+.+++++|+++ -++.+.+.+.|++++++++++.+.+.++ +
T Consensus 144 ~~~~~~v~~l~~~~G~~-~~~~~~~------~~d~~~a~~~~~p~~~a~~l~~~l~~~g~~~~~~~~la~~~f~~~~~~~ 216 (298)
T 2pv7_A 144 PERYEWLLEQIQIWGAK-IYQTNAT------EHDHNMTYIQALRHFSTFANGLHLSKQPINLANLLALSSPIYRLELAMI 216 (298)
T ss_dssp GGGTHHHHHHHHHTTCE-EEECCHH------HHHHHHHHHTHHHHHHHHHHHHHHTTSSCCHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCE-EEECCHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhcCHHHHHHHHHH
Confidence 78899999999999973 4333322 2346688899999864 6677777789999999999999998862 3
Q ss_pred HHHHHHhcHHHHHHhcC
Q 012479 347 SKIISTQGMLAVYNSFS 363 (462)
Q Consensus 347 ~~li~e~G~~~m~~~vs 363 (462)
+++. ..--..++|.++
T Consensus 217 ~ria-~~~p~~~~di~~ 232 (298)
T 2pv7_A 217 GRLF-AQDAELYADIIM 232 (298)
T ss_dssp HHHH-TSCHHHHHHHHC
T ss_pred HHHh-cCCHHHHHHHHH
Confidence 4433 233455566665
No 17
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.78 E-value=5.9e-18 Score=164.06 Aligned_cols=222 Identities=13% Similarity=0.077 Sum_probs=160.2
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecchhH
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~a~ 191 (462)
|||+|||+|+||.+++.+|.+. |++|++.++. .+..+.+.+.|+.. ....+++++ +++|+||+++|++..
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~-~~~~~~~~~~g~~~--~~~~~~~~~-~~~D~vi~av~~~~~ 70 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRR------GHYLIGVSRQ-QSTCEKAVERQLVD--EAGQDLSLL-QTAKIIFLCTPIQLI 70 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTSCS--EEESCGGGG-TTCSEEEECSCHHHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHC------CCEEEEEECC-HHHHHHHHhCCCCc--cccCCHHHh-CCCCEEEEECCHHHH
Confidence 5899999999999999999998 8887766554 44455666777631 114577788 999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEeccchHHHhhhccccCCCCccEEecccCC------CchhhHHhhhcCccccCCCceEEEee
Q 012479 192 ADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKG------MGPSVRRLYVQGKEINGAGINSSFAV 265 (462)
Q Consensus 192 ~~vl~eI~~~Lk~gaiL~~a~G~~i~~~~~~~i~~p~~v~VV~v~Png------pg~~vr~lf~~G~~~~G~Gv~aliav 265 (462)
.++++++.++++++++|+++++++....+...-.++ +++..||.. |.+...++ +.|.++.+++
T Consensus 71 ~~~~~~l~~~~~~~~~vv~~~~~~~~~~~~~~~~~~---~~~~~~p~~g~~~~gp~~a~~~~--------~~g~~~~~~~ 139 (279)
T 2f1k_A 71 LPTLEKLIPHLSPTAIVTDVASVKTAIAEPASQLWS---GFIGGHPMAGTAAQGIDGAEENL--------FVNAPYVLTP 139 (279)
T ss_dssp HHHHHHHGGGSCTTCEEEECCSCCHHHHHHHHHHST---TCEEEEECCCCSCSSGGGCCTTT--------TTTCEEEEEE
T ss_pred HHHHHHHHhhCCCCCEEEECCCCcHHHHHHHHHHhC---CEeecCcccCCccCCHHHHhHHH--------hCCCcEEEec
Confidence 999999999999999988887775432221000222 567667753 33332122 2466777888
Q ss_pred ccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHH-HHHHHHHHHHHcCCC--HHHHHHHHHHHH
Q 012479 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG-IVESLFRRFTENGMN--EDLAYKNTVECI 342 (462)
Q Consensus 266 ~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~pa-liea~~d~~v~~G~~--~e~A~~~~~e~i 342 (462)
....+.+..+.+..+++.+|.. ++.++ +. ..++.+.+++.+|+ +..++.+.+++.|++ ++.++.++.+.+
T Consensus 140 ~~~~~~~~~~~v~~l~~~~g~~-~~~~~---~~---~~~~~~~~~~~~p~~i~~al~~~~~~~~~~~~~~~~~~l~~~~~ 212 (279)
T 2f1k_A 140 TEYTDPEQLACLRSVLEPLGVK-IYLCT---PA---DHDQAVAWISHLPVMVSAALIQACAGEKDGDILKLAQNLASSGF 212 (279)
T ss_dssp CTTCCHHHHHHHHHHHGGGTCE-EEECC---HH---HHHHHHHHHTHHHHHHHHHHHHHHHTCSCHHHHHHHHHHCCHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCE-EEEcC---HH---HHHHHHHHHhhHHHHHHHHHHHHHHhcccccchhHHHhhcCCcc
Confidence 7777899999999999999963 33221 22 35567888888876 666888899999988 899999999999
Q ss_pred HHHHHHHHHHhcHHHHHHhcC
Q 012479 343 TGIISKIISTQGMLAVYNSFS 363 (462)
Q Consensus 343 ~Gli~~li~e~G~~~m~~~vs 363 (462)
.+ ++++. ..--..++|.++
T Consensus 213 ~~-~~r~~-~~~p~~~~~~~~ 231 (279)
T 2f1k_A 213 RD-TSRVG-GGNPELGTMMAT 231 (279)
T ss_dssp HH-HHTGG-GSCHHHHHHHHH
T ss_pred cc-hhccc-CCCHHHHHHHHH
Confidence 87 56554 233455566665
No 18
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.67 E-value=2.3e-15 Score=145.06 Aligned_cols=204 Identities=13% Similarity=0.099 Sum_probs=139.3
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcE-EEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEee
Q 012479 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIV-VKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (462)
Q Consensus 108 l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~-Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLav 186 (462)
+++ +||+|||+|.||.+++.+|.+. |++ |.++++..++..+.+...|+.. ..+.+++++++|+||+++
T Consensus 8 ~~~-m~i~iiG~G~mG~~~a~~l~~~------g~~~v~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~Dvvi~av 76 (266)
T 3d1l_A 8 IED-TPIVLIGAGNLATNLAKALYRK------GFRIVQVYSRTEESARELAQKVEAEY----TTDLAEVNPYAKLYIVSL 76 (266)
T ss_dssp GGG-CCEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSHHHHHHHHHHTTCEE----ESCGGGSCSCCSEEEECC
T ss_pred CCC-CeEEEEcCCHHHHHHHHHHHHC------CCeEEEEEeCCHHHHHHHHHHcCCce----eCCHHHHhcCCCEEEEec
Confidence 445 7899999999999999999998 887 5565554333333344447764 567888999999999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEe-ccchHHHhhhccccCCCCccEEecccCCC--chhhHHhhhcCccccCCCceEEE
Q 012479 187 SDAAQADNYEKIFSCMKPNSILGLS-HGFLLGHLQSMGLDFPKNIGVIAVCPKGM--GPSVRRLYVQGKEINGAGINSSF 263 (462)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~gaiL~~a-~G~~i~~~~~~~i~~p~~v~VV~v~Pngp--g~~vr~lf~~G~~~~G~Gv~ali 263 (462)
|+..+.++++++.+.++++++|++. .|+....+.+ .++. ..+ .||..| +...+ . ..+.+.++
T Consensus 77 ~~~~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~l~~---~~~~-~~~--~~~~~~~~g~~~~-~--------~~~~~~~v 141 (266)
T 3d1l_A 77 KDSAFAELLQGIVEGKREEALMVHTAGSIPMNVWEG---HVPH-YGV--FYPMQTFSKQREV-D--------FKEIPFFI 141 (266)
T ss_dssp CHHHHHHHHHHHHTTCCTTCEEEECCTTSCGGGSTT---TCSS-EEE--EEECCCC---CCC-C--------CTTCCEEE
T ss_pred CHHHHHHHHHHHHhhcCCCcEEEECCCCCchHHHHH---HHHh-ccC--cCCceecCCCchh-h--------cCCCeEEE
Confidence 9999999999999999999987655 4555444332 2222 111 344443 11111 1 13566644
Q ss_pred eeccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHH
Q 012479 264 AVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRF-TENGMNEDLAYKNTVECI 342 (462)
Q Consensus 264 av~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~paliea~~d~~-v~~G~~~e~A~~~~~e~i 342 (462)
...+.+..+.+..+++.+|.. ++... ++ ....|+..+.+++.+++.+-++.+.+ .+.|+++++++.+..+++
T Consensus 142 ---~~~~~~~~~~~~~l~~~~g~~-~~~~~--~~-~~~~~~~~~~l~~~~~~~~~~~~eal~~~~Gl~~~~~~~l~~~~~ 214 (266)
T 3d1l_A 142 ---EASSTEDAAFLKAIASTLSNR-VYDAD--SE-QRKSLHLAAVFTCNFTNHMYALAAELLKKYNLPFDVMLPLIDETA 214 (266)
T ss_dssp ---EESSHHHHHHHHHHHHTTCSC-EEECC--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGGHHHHHHHH
T ss_pred ---ecCCHHHHHHHHHHHHhcCCc-EEEeC--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 234678899999999999963 33221 12 11357788888888886444444444 478999999999888888
Q ss_pred HH
Q 012479 343 TG 344 (462)
Q Consensus 343 ~G 344 (462)
.|
T Consensus 215 ~~ 216 (266)
T 3d1l_A 215 RK 216 (266)
T ss_dssp HH
T ss_pred HH
Confidence 76
No 19
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.63 E-value=6.3e-16 Score=150.96 Aligned_cols=212 Identities=12% Similarity=0.054 Sum_probs=133.8
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEE-EEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecchh
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vi-vg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~a 190 (462)
+||+|||+|+||.+++++|.+. ++|+ +++++.++..+.+...|. . ..+++++++++|+||+++|++.
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-------~~v~~v~~~~~~~~~~~~~~~g~-~----~~~~~~~~~~~DvVilav~~~~ 70 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-------YEIGYILSRSIDRARNLAEVYGG-K----AATLEKHPELNGVVFVIVPDRY 70 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----------CCCEECSSHHHHHHHHHHTCC-C----CCSSCCCCC---CEEECSCTTT
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-------CcEEEEEeCCHHHHHHHHHHcCC-c----cCCHHHHHhcCCEEEEeCChHH
Confidence 6899999999999999998653 3453 555543333333345565 3 5677788899999999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEEec-cchHHHhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceEEEeeccCC
Q 012479 191 QADNYEKIFSCMKPNSILGLSH-GFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDV 269 (462)
Q Consensus 191 ~~~vl~eI~~~Lk~gaiL~~a~-G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~aliav~qd~ 269 (462)
+.++++++. +++++|++++ ++.+..+.. ..+.....+..+|++|... +.+ .+++..++.
T Consensus 71 ~~~v~~~l~---~~~~ivi~~s~~~~~~~l~~---~~~~~~~p~~~~~g~~~~~--~~~--------~~~~~~~~~---- 130 (276)
T 2i76_A 71 IKTVANHLN---LGDAVLVHCSGFLSSEIFKK---SGRASIHPNFSFSSLEKAL--EMK--------DQIVFGLEG---- 130 (276)
T ss_dssp HHHHHTTTC---CSSCCEEECCSSSCGGGGCS---SSEEEEEECSCC--CTTGG--GCG--------GGCCEEECC----
T ss_pred HHHHHHHhc---cCCCEEEECCCCCcHHHHHH---hhccccchhhhcCCCchhH--HHh--------CCCeEEEEe----
Confidence 888887765 6788776555 555544332 1110111222344544332 112 256665543
Q ss_pred CHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHH-HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Q 012479 270 DGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG-IVESLFRRFTENGMNEDLAYKNTVECITGIISK 348 (462)
Q Consensus 270 tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~pa-liea~~d~~v~~G~~~e~A~~~~~e~i~Gli~~ 348 (462)
+.+.++.++.+++.+|.. ++.. .+...+.++..+++++.++. ++....+.+++.|+++++|+ ..+.+.| .++
T Consensus 131 ~~~~~~~~~~l~~~lG~~-~~~v---~~~~~~~~~~~~~l~~n~~~~~~~~a~~~~~~~Gl~~~~a~--~~~l~~~-~~~ 203 (276)
T 2i76_A 131 DERGLPIVKKIAEEISGK-YFVI---PSEKKKAYHLAAVIASNFPVALAYLSKRIYTLLGLDEPELL--IHTLMKG-VAD 203 (276)
T ss_dssp CTTTHHHHHHHHHHHCSC-EEEC---CGGGHHHHHHHHHHHHTTHHHHHHHHHHHHHTTTCSCHHHH--HHHHHHH-HHH
T ss_pred ChHHHHHHHHHHHHhCCC-EEEE---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHH--HHHHHHH-HHH
Confidence 345688999999999963 3333 23334467777888777775 44444567778999999987 7788887 788
Q ss_pred HHHHhcHHHHHHhcCCc
Q 012479 349 IISTQGMLAVYNSFSGE 365 (462)
Q Consensus 349 li~e~G~~~m~~~vs~~ 365 (462)
++.+.| -++.++.|
T Consensus 204 ~~~~~g---p~~~~tgP 217 (276)
T 2i76_A 204 NIKKMR---VECSLTGP 217 (276)
T ss_dssp HHHHSC---GGGGCCSH
T ss_pred HHHhcC---hHhhCCCC
Confidence 888888 26777643
No 20
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.61 E-value=2.3e-14 Score=144.26 Aligned_cols=193 Identities=14% Similarity=0.115 Sum_probs=131.7
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHH-----------HcCceecC----------CCc
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-----------AAGFTEEN----------GTL 169 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~-----------~~G~~~~d----------~~~ 169 (462)
++||+|||+|+||.++|.+|.++ |++|++++++ ....+.+. +.|..... ..+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~------G~~V~l~d~~-~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~ 78 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG------GFRVKLYDIE-PRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC 78 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT------TCCEEEECSC-HHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE
T ss_pred CceEEEEeeCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe
Confidence 38999999999999999999999 9998877665 33344432 23422100 014
Q ss_pred CCHhhhhccCCeEEEeecchh--HHHHHHHHHhcCCCCcEEE-EeccchHHHhhhccccCCCCccEEecccCCCchhhHH
Q 012479 170 GDIYETISGSDLVLLLISDAA--QADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRR 246 (462)
Q Consensus 170 ~~~~eav~~ADvViLavpd~a--~~~vl~eI~~~Lk~gaiL~-~a~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~ 246 (462)
.++++++++||+||+++|... ..+++++|.++++++++|+ .++|+.+..+.+ .++...+++++||+.|.+.
T Consensus 79 ~~~~eav~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~la~---~~~~~~r~ig~Hp~~P~~~--- 152 (319)
T 2dpo_A 79 TNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFT---GLAHVKQCIVAHPVNPPYY--- 152 (319)
T ss_dssp CCHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHT---TCTTGGGEEEEEECSSTTT---
T ss_pred CCHHHHHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHHHHH---hcCCCCCeEEeecCCchhh---
Confidence 688899999999999999754 3568899999999999875 667787766654 3444568999999998754
Q ss_pred hhhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHHHHHHHHHHHHH
Q 012479 247 LYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTE 326 (462)
Q Consensus 247 lf~~G~~~~G~Gv~aliav~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~paliea~~d~~v~ 326 (462)
.+ ..-++++...+++.++.++.+++.+|...+. . ..+. .-| +..-.+.+++...+..+.+
T Consensus 153 ----------~~-lveiv~g~~t~~e~~~~~~~l~~~lGk~~v~-v--~~~~--~Gf----i~Nrll~a~~~EA~~l~~~ 212 (319)
T 2dpo_A 153 ----------IP-LVELVPHPETSPATVDRTHALMRKIGQSPVR-V--LKEI--DGF----VLNRLQYAIISEAWRLVEE 212 (319)
T ss_dssp ----------CC-EEEEEECTTCCHHHHHHHHHHHHHTTCEEEE-C--SSCC--TTT----THHHHHHHHHHHHHHHHHT
T ss_pred ----------cc-eEEEeCCCCCCHHHHHHHHHHHHHcCCEEEE-E--CCCc--CCc----hHHHHHHHHHHHHHHHHHh
Confidence 12 2346678889999999999999999974221 1 0111 112 1222222334444444445
Q ss_pred cCCCHHHHHH
Q 012479 327 NGMNEDLAYK 336 (462)
Q Consensus 327 ~G~~~e~A~~ 336 (462)
.|.++++...
T Consensus 213 g~~~~~~id~ 222 (319)
T 2dpo_A 213 GIVSPSDLDL 222 (319)
T ss_dssp TSSCHHHHHH
T ss_pred CCCCHHHHHH
Confidence 5669987665
No 21
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.58 E-value=9.9e-14 Score=136.01 Aligned_cols=212 Identities=15% Similarity=0.134 Sum_probs=142.2
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHc-----------C--------------ceec
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-----------G--------------FTEE 165 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~-----------G--------------~~~~ 165 (462)
++||+|||+|+||.++|+.|..+ |++|++.+++ .+..+.+.+. | +..
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~------G~~V~l~d~~-~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~- 75 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFH------GFAVTAYDIN-TDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY- 75 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSS-HHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCeEEEEeCC-HHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-
Confidence 48999999999999999999999 9998876655 3334444332 2 222
Q ss_pred CCCcCCHhhhhccCCeEEEeecch--hHHHHHHHHHhcCCCCcEEE-EeccchHHHhhhccccCCCCccEEecccCCCch
Q 012479 166 NGTLGDIYETISGSDLVLLLISDA--AQADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGP 242 (462)
Q Consensus 166 d~~~~~~~eav~~ADvViLavpd~--a~~~vl~eI~~~Lk~gaiL~-~a~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~ 242 (462)
..++++++++||+||+++|+. ...++++++.++++++++|+ .++++.+..+.. .++...+++++||..|..
T Consensus 76 ---~~~~~~~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~la~---~~~~~~~~ig~h~~~p~~ 149 (283)
T 4e12_A 76 ---SDDLAQAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDLVG---YTGRGDKFLALHFANHVW 149 (283)
T ss_dssp ---ESCHHHHTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHH---HHSCGGGEEEEEECSSTT
T ss_pred ---eCCHHHHhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHHHHh---hcCCCcceEEEccCCCcc
Confidence 467888999999999999987 55678999999999999876 567777655543 223345899999998865
Q ss_pred hhHHhhhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHHHHHHHHH
Q 012479 243 SVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFR 322 (462)
Q Consensus 243 ~vr~lf~~G~~~~G~Gv~aliav~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~paliea~~d 322 (462)
. +-...++++...+.+.++.+..+++.+|...+. .. .+ .. -| +..-.+.+++...+.
T Consensus 150 ~--------------~~lvevv~~~~t~~~~~~~~~~l~~~~g~~~v~-v~--~~-~~-g~----i~nr~~~~~~~ea~~ 206 (283)
T 4e12_A 150 V--------------NNTAEVMGTTKTDPEVYQQVVEFASAIGMVPIE-LK--KE-KA-GY----VLNSLLVPLLDAAAE 206 (283)
T ss_dssp T--------------SCEEEEEECTTSCHHHHHHHHHHHHHTTCEEEE-CS--SC-CT-TT----THHHHHHHHHHHHHH
T ss_pred c--------------CceEEEEeCCCCCHHHHHHHHHHHHHcCCEEEE-Ee--cC-CC-CE----EehHHHHHHHHHHHH
Confidence 4 233456778888999999999999999964221 11 11 11 12 122223334444455
Q ss_pred HHHHcCCCHHHHHHHHHHHH---HHHHHHHHHHhcHHHHHH
Q 012479 323 RFTENGMNEDLAYKNTVECI---TGIISKIISTQGMLAVYN 360 (462)
Q Consensus 323 ~~v~~G~~~e~A~~~~~e~i---~Gli~~li~e~G~~~m~~ 360 (462)
.+.+.|.++++.....-... .| --+++-..|++..++
T Consensus 207 l~~~g~~~~~~id~~~~~~~g~~~G-p~~~~D~~Gld~~~~ 246 (283)
T 4e12_A 207 LLVDGIADPETIDKTWRIGTGAPKG-PFEIFDIVGLTTAYN 246 (283)
T ss_dssp HHHTTSCCHHHHHHHHHHHHCCSSC-HHHHHHHHCHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHhccCCCcC-HHHHHHhccHHHHHH
Confidence 55556679987555322211 14 345555667755544
No 22
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.57 E-value=1.6e-14 Score=138.83 Aligned_cols=162 Identities=19% Similarity=0.153 Sum_probs=111.4
Q ss_pred ccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCch--------------hHHHHHHcCceecCCC
Q 012479 103 LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR--------------SFAEARAAGFTEENGT 168 (462)
Q Consensus 103 ~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~--------------s~~~A~~~G~~~~d~~ 168 (462)
.....+.+ +||+|||+|+||.++|++|.+. |++|++++|..++ ..+.+.+.|...
T Consensus 12 ~~~~~~~~-~kIgiIG~G~mG~alA~~L~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 80 (245)
T 3dtt_A 12 HENLYFQG-MKIAVLGTGTVGRTMAGALADL------GHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH---- 80 (245)
T ss_dssp -------C-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE----
T ss_pred ccccccCC-CeEEEECCCHHHHHHHHHHHHC------CCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee----
Confidence 33477888 9999999999999999999999 9999888776443 122222334432
Q ss_pred cCCHhhhhccCCeEEEeecchhHHHHHHHH-HhcCCCCcEEEEec-cc----------------h-HHHhhhccccCCCC
Q 012479 169 LGDIYETISGSDLVLLLISDAAQADNYEKI-FSCMKPNSILGLSH-GF----------------L-LGHLQSMGLDFPKN 229 (462)
Q Consensus 169 ~~~~~eav~~ADvViLavpd~a~~~vl~eI-~~~Lk~gaiL~~a~-G~----------------~-i~~~~~~~i~~p~~ 229 (462)
..++.|++++||+||+++|+..+.+++.++ .+.+ +|++|++++ |+ . ...+++ .+| +
T Consensus 81 ~~~~~e~~~~aDvVilavp~~~~~~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~---~l~-~ 155 (245)
T 3dtt_A 81 LAAFADVAAGAELVVNATEGASSIAALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQR---TFP-E 155 (245)
T ss_dssp EEEHHHHHHHCSEEEECSCGGGHHHHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHH---HST-T
T ss_pred ccCHHHHHhcCCEEEEccCcHHHHHHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHH---HCC-C
Confidence 567889999999999999999999999998 7887 888877665 22 1 233433 445 3
Q ss_pred ccEEecccCCCchhhHHhhhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCC
Q 012479 230 IGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (462)
Q Consensus 230 v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~aliav~qd~tgea~e~a~al~~aiG~~ 287 (462)
.+||+.+|+.++++....-.. -.|-..++.... +.++.+.+..+++.+|..
T Consensus 156 ~~vv~~~~~~~a~v~~~~~~a-----~~g~~~~~v~g~--d~~~~~~v~~ll~~~g~~ 206 (245)
T 3dtt_A 156 AKVVKTLNTMNASLMVDPGRA-----AGGDHSVFVSGN--DAAAKAEVATLLKSLGHQ 206 (245)
T ss_dssp SEEEECSTTSCHHHHHCGGGT-----GGGCCCEEEECS--CHHHHHHHHHHHHHTTCC
T ss_pred CeEEEeecccCHHHhcCcccc-----CCCCeeEEEECC--CHHHHHHHHHHHHHcCCC
Confidence 689999999988874321100 012222222232 688999999999999964
No 23
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.56 E-value=2.4e-14 Score=138.64 Aligned_cols=153 Identities=13% Similarity=0.031 Sum_probs=109.3
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecchhH
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~a~ 191 (462)
+||+|||+|+||.++|++|++. |++|+.+++. +.+++|| |+++|++++
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~------G~~V~~~~~~------------------------~~~~~aD--ilavP~~ai 54 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSV------GHYVTVLHAP------------------------EDIRDFE--LVVIDAHGV 54 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHT------TCEEEECSSG------------------------GGGGGCS--EEEECSSCH
T ss_pred cEEEEEeeCHHHHHHHHHHHHC------CCEEEEecCH------------------------HHhccCC--EEEEcHHHH
Confidence 7999999999999999999999 9887654441 1156789 999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecc-chHHHhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceEEEeeccCCC
Q 012479 192 ADNYEKIFSCMKPNSILGLSHG-FLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVD 270 (462)
Q Consensus 192 ~~vl~eI~~~Lk~gaiL~~a~G-~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~aliav~qd~t 270 (462)
.++++++.+++++|++|++++| .+...+.. ..+.+..||..||+. |.+..++.. +
T Consensus 55 ~~vl~~l~~~l~~g~ivvd~sgs~~~~vl~~---~~~~g~~fvg~HPm~------------------g~~~~i~a~---d 110 (232)
T 3dfu_A 55 EGYVEKLSAFARRGQMFLHTSLTHGITVMDP---LETSGGIVMSAHPIG------------------QDRWVASAL---D 110 (232)
T ss_dssp HHHHHHHHTTCCTTCEEEECCSSCCGGGGHH---HHHTTCEEEEEEEEE------------------TTEEEEEES---S
T ss_pred HHHHHHHHHhcCCCCEEEEECCcCHHHHHHH---HHhCCCcEEEeeeCC------------------CCceeeeCC---C
Confidence 9999999999999999998765 44333322 113467899999972 234434433 6
Q ss_pred HHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHHHHHHHHHHH
Q 012479 271 GRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRF 324 (462)
Q Consensus 271 gea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~paliea~~d~~ 324 (462)
.++++.++.|++.+|. +++..+. .+-|.|++....+.-+.+++....+.+
T Consensus 111 ~~a~~~l~~L~~~lG~-~vv~~~~---~~hd~~~AAvsh~nhLv~L~~~A~~ll 160 (232)
T 3dfu_A 111 ELGETIVGLLVGELGG-SIVEIAD---DKRAQLAAALTYAGFLSTLQRDASYFL 160 (232)
T ss_dssp HHHHHHHHHHHHHTTC-EECCCCG---GGHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCC-EEEEeCH---HHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7799999999999997 4444433 334477665444444445555554444
No 24
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.55 E-value=9.5e-14 Score=136.30 Aligned_cols=193 Identities=17% Similarity=0.184 Sum_probs=129.2
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecch-
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA- 189 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~- 189 (462)
|+||+|||+|+||.++|++|.+. |++|+++++. ....+...+.|+.. ..+.+|++++||+||+++|+.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~------G~~V~~~d~~-~~~~~~~~~~g~~~----~~~~~~~~~~aDvvi~~vp~~~ 71 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKA------GYLLNVFDLV-QSAVDGLVAAGASA----ARSARDAVQGADVVISMLPASQ 71 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT------TCEEEEECSS-HHHHHHHHHTTCEE----CSSHHHHHTTCSEEEECCSCHH
T ss_pred CCEEEEEeecHHHHHHHHHHHhC------CCeEEEEcCC-HHHHHHHHHCCCeE----cCCHHHHHhCCCeEEEECCCHH
Confidence 48999999999999999999999 9988777654 44566666778875 678999999999999999855
Q ss_pred hHHHHHH---HHHhcCCCCcEEEEeccchHH---HhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceEEE
Q 012479 190 AQADNYE---KIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSF 263 (462)
Q Consensus 190 a~~~vl~---eI~~~Lk~gaiL~~a~G~~i~---~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~ali 263 (462)
...+++. ++.+.++++++|++++..... .+.+ .....++.++. +|..++... .. .|...++
T Consensus 72 ~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~--~~~~~g~~~~~-~pv~~~~~~---~~-------~g~l~~~ 138 (302)
T 2h78_A 72 HVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHA--AARERGLAMLD-APVSGGTAG---AA-------AGTLTFM 138 (302)
T ss_dssp HHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHH--HHHHTTCCEEE-CCEESCHHH---HH-------HTCEEEE
T ss_pred HHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHH--HHHHcCCEEEE-EEccCChhh---Hh-------cCCceEE
Confidence 5577887 899999999998887655322 2222 11123577887 487766541 11 1333323
Q ss_pred eeccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhH-HhHH----HHHHHHHHHHHHHcCCCHHHHHHH
Q 012479 264 AVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGIL-LGAV----HGIVESLFRRFTENGMNEDLAYKN 337 (462)
Q Consensus 264 av~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL-~G~~----paliea~~d~~v~~G~~~e~A~~~ 337 (462)
+.. +.+..+.+..+++.+|.. ++... +. -.+...-+ .+.. .+++.-++..+.+.|++++.....
T Consensus 139 -~~g--~~~~~~~~~~ll~~~g~~-~~~~~---~~---~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~ 207 (302)
T 2h78_A 139 -VGG--DAEALEKARPLFEAMGRN-IFHAG---PD---GAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEI 207 (302)
T ss_dssp -EES--CHHHHHHHHHHHHHHEEE-EEEEE---ST---THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred -eCC--CHHHHHHHHHHHHHhCCC-eEEcC---Cc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 233 688999999999999963 22221 11 11111111 2222 224444445678899999876663
No 25
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.54 E-value=4.1e-14 Score=133.91 Aligned_cols=154 Identities=14% Similarity=0.101 Sum_probs=110.7
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEE-EecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecch
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Viv-g~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~ 189 (462)
|+||+|||+|+||.++|.+|.+. |++|++ +.|..++..+.+++.|... ..+..++++++|+||+++|++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~------g~~V~~v~~r~~~~~~~l~~~~g~~~----~~~~~~~~~~aDvVilavp~~ 92 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAA------QIPAIIANSRGPASLSSVTDRFGASV----KAVELKDALQADVVILAVPYD 92 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHT------TCCEEEECTTCGGGGHHHHHHHTTTE----EECCHHHHTTSSEEEEESCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCEEEEEECCCHHHHHHHHHHhCCCc----ccChHHHHhcCCEEEEeCChH
Confidence 38999999999999999999998 888877 5555455555566667653 345667789999999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEE-Eeccc--------------hHHHhhhccccCCCCccEEecccCCCchhhHHhhhcCccc
Q 012479 190 AQADNYEKIFSCMKPNSILG-LSHGF--------------LLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEI 254 (462)
Q Consensus 190 a~~~vl~eI~~~Lk~gaiL~-~a~G~--------------~i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~ 254 (462)
.+.++++++.+ + ++++|+ .+.|+ ....+++ .+| +.+|++++|+.|...... |...
T Consensus 93 ~~~~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~---~l~-~~~vv~~~~~~~~~v~~~----g~~~ 162 (220)
T 4huj_A 93 SIADIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSE---LVP-GAKVVKAFNTLPAAVLAA----DPDK 162 (220)
T ss_dssp GHHHHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHH---HST-TCEEEEESCSSCHHHHTS----CSBC
T ss_pred HHHHHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHH---HCC-CCCEEECCCCCCHHHhhh----Cccc
Confidence 99999999887 5 577655 45566 3445544 445 568999999998776321 1000
Q ss_pred cCCCceEEEeeccCCCHHHHHHHHHHHHHhCCC
Q 012479 255 NGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (462)
Q Consensus 255 ~G~Gv~aliav~qd~tgea~e~a~al~~aiG~~ 287 (462)
.+.+...+++ .. +.++.+.+..+++.+|..
T Consensus 163 ~~~~~~v~~~-g~--~~~~~~~v~~l~~~~G~~ 192 (220)
T 4huj_A 163 GTGSRVLFLS-GN--HSDANRQVAELISSLGFA 192 (220)
T ss_dssp SSCEEEEEEE-ES--CHHHHHHHHHHHHHTTCE
T ss_pred CCCCeeEEEe-CC--CHHHHHHHHHHHHHhCCC
Confidence 1122333333 32 489999999999999974
No 26
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.54 E-value=9.3e-14 Score=138.32 Aligned_cols=184 Identities=12% Similarity=0.047 Sum_probs=121.7
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecC-CchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecc
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRK-GSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~-~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd 188 (462)
++||+|||+|+||.++|++|.+. |+ +|++++++ +.+..+.+.+.|+.. ..++.|++++||+||+++|+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~------G~~~V~~~dr~~~~~~~~~~~~~g~~~----~~~~~e~~~~aDvVi~~vp~ 93 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA------GAIDMAAYDAASAESWRPRAEELGVSC----KASVAEVAGECDVIFSLVTA 93 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH------SCCEEEEECSSCHHHHHHHHHHTTCEE----CSCHHHHHHHCSEEEECSCT
T ss_pred CCEEEEECccHHHHHHHHHHHHC------CCCeEEEEcCCCCHHHHHHHHHCCCEE----eCCHHHHHhcCCEEEEecCc
Confidence 38999999999999999999999 99 88877775 255667777888875 67899999999999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEeccchHHH---hhhccccCCC--CccEEecccCCCchhhHHhhhcCccccCCCceEEE
Q 012479 189 AAQADNYEKIFSCMKPNSILGLSHGFLLGH---LQSMGLDFPK--NIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSF 263 (462)
Q Consensus 189 ~a~~~vl~eI~~~Lk~gaiL~~a~G~~i~~---~~~~~i~~p~--~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~ali 263 (462)
....++++++.++++++++|++.+++.... +.. ..... ++.++- +|-..+... ..| ..+. +
T Consensus 94 ~~~~~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~--~~~~~~~g~~~vd-~pv~g~~~~----~~g------~l~i-~ 159 (312)
T 3qsg_A 94 QAALEVAQQAGPHLCEGALYADFTSCSPAVKRAIGD--VISRHRPSAQYAA-VAVMSAVKP----HGH------RVPL-V 159 (312)
T ss_dssp TTHHHHHHHHGGGCCTTCEEEECCCCCHHHHHHHHH--HHHHHCTTCEEEE-EEECSCSTT----TGG------GSEE-E
T ss_pred hhHHHHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHH--HHHhhcCCCeEEe-ccccCCchh----hcC------CEEE-E
Confidence 999999999999999999999887764221 111 01112 455654 232211110 012 2443 4
Q ss_pred eeccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHH--------HHHHHHHHHHHHcCCCHH
Q 012479 264 AVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVH--------GIVESLFRRFTENGMNED 332 (462)
Q Consensus 264 av~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~p--------aliea~~d~~v~~G~~~e 332 (462)
+...+ . +.++.+++.+|.. ++.+. +..+....+-.+.+ .+.|++. .+.+.|++++
T Consensus 160 vgg~~----~-~~~~~ll~~~g~~-~~~~g-------~~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~-la~~~Gld~~ 222 (312)
T 3qsg_A 160 VDGDG----A-RRFQAAFTLYGCR-IEVLD-------GEVGGAALLKMCRSAVLKGLEALFLEALA-AAEKMGLADR 222 (312)
T ss_dssp EESTT----H-HHHHHHHHTTTCE-EEECC-------SSTTHHHHHHHHHHHHHHHHHHHHHHHHH-HHHTTTCHHH
T ss_pred ecCCh----H-HHHHHHHHHhCCC-eEEcC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCHH
Confidence 43332 1 7889999999964 22111 11233333322222 2444444 7788999984
No 27
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.53 E-value=1.4e-13 Score=134.47 Aligned_cols=199 Identities=15% Similarity=0.070 Sum_probs=128.9
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecc-hh
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD-AA 190 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd-~a 190 (462)
+||+|||+|+||.++|++|.+. |++|++++|+.+ ..+...+.|+.. ..+.+|++++||+||+++|+ ..
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~~~-~~~~~~~~g~~~----~~~~~~~~~~aDvvi~~vp~~~~ 70 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA------GCSVTIWNRSPE-KAEELAALGAER----AATPCEVVESCPVTFAMLADPAA 70 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSGG-GGHHHHHTTCEE----CSSHHHHHHHCSEEEECCSSHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC------CCeEEEEcCCHH-HHHHHHHCCCee----cCCHHHHHhcCCEEEEEcCCHHH
Confidence 7999999999999999999999 999887766544 455666678875 67899999999999999994 56
Q ss_pred HHHHH---HHHHhcCCCCcEEEEeccchHHHhhhc-cccCCCCccEEecccCCCchhhHHhhhcCccccCCCceEEEeec
Q 012479 191 QADNY---EKIFSCMKPNSILGLSHGFLLGHLQSM-GLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (462)
Q Consensus 191 ~~~vl---~eI~~~Lk~gaiL~~a~G~~i~~~~~~-~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~aliav~ 266 (462)
..+++ +++.+.+++|++|++.++......... ......++.++. +|...+... . . .|...+++ .
T Consensus 71 ~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~--a-~-------~g~l~~~~-g 138 (287)
T 3pef_A 71 AEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLE-APVSGSKKP--A-E-------DGTLIILA-A 138 (287)
T ss_dssp HHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHH--H-H-------HTCEEEEE-E
T ss_pred HHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEE-CCCcCCHHH--H-h-------cCCEEEEE-e
Confidence 77888 789999999999988887643221110 011123566776 775433331 1 2 24444343 3
Q ss_pred cCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHHHHHHHHHHHHHcCCCHHHHHHH
Q 012479 267 QDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKN 337 (462)
Q Consensus 267 qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~paliea~~d~~v~~G~~~e~A~~~ 337 (462)
. +.+..+.+..+++.+|.. ++...-......-.+.... +.+...+++.-++..+.+.|+++++.+..
T Consensus 139 g--~~~~~~~~~~ll~~~g~~-~~~~g~~g~~~~~Kl~~N~-~~~~~~~~~~E~~~l~~~~G~d~~~~~~~ 205 (287)
T 3pef_A 139 G--DRNLYDEAMPGFEKMGKK-IIHLGDVGKGAEMKLVVNM-VMGGMMACFCEGLALGEKAGLATDAILDV 205 (287)
T ss_dssp E--CHHHHHHHHHHHHHHEEE-EEECSSTTHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred C--CHHHHHHHHHHHHHhCCC-eEEeCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 3 478899999999999964 2222111111000111111 11112223444456678899999877764
No 28
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.53 E-value=4.5e-13 Score=132.05 Aligned_cols=217 Identities=13% Similarity=0.114 Sum_probs=140.4
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHH-----------HHcCceecC-------------
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA-----------RAAGFTEEN------------- 166 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A-----------~~~G~~~~d------------- 166 (462)
|+||+|||+|+||.++|..|.++ |++|++.++..+ ..+.+ .+.|.....
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~------G~~V~~~d~~~~-~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~ 87 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT------GHTVVLVDQTED-ILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLST 87 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHH-HHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHH-HHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhc
Confidence 47999999999999999999999 999887766533 23322 123321000
Q ss_pred -CCcCCHhhhhccCCeEEEeecchh--HHHHHHHHHhcCCCCcEEE-EeccchHHHhhhccccCCCCccEEecccCCCch
Q 012479 167 -GTLGDIYETISGSDLVLLLISDAA--QADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGP 242 (462)
Q Consensus 167 -~~~~~~~eav~~ADvViLavpd~a--~~~vl~eI~~~Lk~gaiL~-~a~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~ 242 (462)
....++++++++||+||+++|+.. ..++++++.++++++++|+ .++|+.+..+.. .++..-++++.||+.|..
T Consensus 88 i~~~~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~~l~~---~~~~~~~~~g~h~~~P~~ 164 (302)
T 1f0y_A 88 IATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIAN---ATTRQDRFAGLHFFNPVP 164 (302)
T ss_dssp EEEESCHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHHHHHT---TSSCGGGEEEEEECSSTT
T ss_pred eEEecCHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHH---hcCCcccEEEEecCCCcc
Confidence 014577789999999999999865 3568889999999999765 567887665543 333334799999998865
Q ss_pred hhHHhhhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHHHHHHHHH
Q 012479 243 SVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFR 322 (462)
Q Consensus 243 ~vr~lf~~G~~~~G~Gv~aliav~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~paliea~~d 322 (462)
. +-...++.....+++..+.+..+++.+|.. ++.. .+. .-| +..-.+.+++.-.+.
T Consensus 165 ~--------------~~~~~i~~g~~~~~e~~~~~~~l~~~~G~~-~v~~---~~~--~g~----i~nr~l~~~~~Ea~~ 220 (302)
T 1f0y_A 165 V--------------MKLVEVIKTPMTSQKTFESLVDFSKALGKH-PVSC---KDT--PGF----IVNRLLVPYLMEAIR 220 (302)
T ss_dssp T--------------CCEEEEECCTTCCHHHHHHHHHHHHHTTCE-EEEE---CSC--TTT----THHHHHHHHHHHHHH
T ss_pred c--------------CceEEEeCCCCCCHHHHHHHHHHHHHcCCc-eEEe---cCc--ccc----cHHHHHHHHHHHHHH
Confidence 4 122335667778999999999999999963 2211 111 111 122233345655666
Q ss_pred HHHHcCCCHHHHHHHHHHHH---HHHHHHHHHHhcHHHHHHhc
Q 012479 323 RFTENGMNEDLAYKNTVECI---TGIISKIISTQGMLAVYNSF 362 (462)
Q Consensus 323 ~~v~~G~~~e~A~~~~~e~i---~Gli~~li~e~G~~~m~~~v 362 (462)
.+.+.|.++++......... .| --.+.-..|++.+++..
T Consensus 221 l~~~g~~~~~~id~~~~~g~g~p~G-P~~~~D~~Gld~~~~~~ 262 (302)
T 1f0y_A 221 LYERGDASKEDIDTAMKLGAGYPMG-PFELLDYVGLDTTKFIV 262 (302)
T ss_dssp HHHTTSSCHHHHHHHHHHHHCCSSC-HHHHHHHHCHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHhCCCCCCC-HHHHHHHHHHHHHHHHH
Confidence 66677788877554322111 13 23455556765555443
No 29
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.52 E-value=9.7e-13 Score=138.71 Aligned_cols=212 Identities=13% Similarity=0.108 Sum_probs=140.7
Q ss_pred ccceeecCcccccccc-----cccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCch-------hHHHH
Q 012479 90 DEYIVRGGRDLFNLLP-----DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR-------SFAEA 157 (462)
Q Consensus 90 ~e~~~~~~~~~f~~~~-----~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~-------s~~~A 157 (462)
.|..++ +|..|... ..-.-++||+|||+|.||.+||+.|.++ |++|++.+++.++ ..+.+
T Consensus 30 a~~~~~--~w~~p~~~~~~~~~~~~~i~kVaVIGaG~MG~~IA~~la~a------G~~V~l~D~~~e~a~~~i~~~l~~~ 101 (460)
T 3k6j_A 30 AHSLAG--QWSLPNDRGDHTNSEAYDVNSVAIIGGGTMGKAMAICFGLA------GIETFLVVRNEQRCKQELEVMYARE 101 (460)
T ss_dssp TTCCTT--SCBCSTTSCBTTSCCCCCCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHHHHHHHHHHHHHHH
T ss_pred HHHhhc--cccCCCCccccccCCcccCCEEEEECCCHHHHHHHHHHHHC------CCeEEEEECcHHHHHHHHHHHHHHH
Confidence 444444 68777332 1223348999999999999999999999 9999887765442 12334
Q ss_pred HHcCceecC---------CCcCCHhhhhccCCeEEEeecchhH--HHHHHHHHhcCCCCcEEE-EeccchHHHhhhcccc
Q 012479 158 RAAGFTEEN---------GTLGDIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLD 225 (462)
Q Consensus 158 ~~~G~~~~d---------~~~~~~~eav~~ADvViLavpd~a~--~~vl~eI~~~Lk~gaiL~-~a~G~~i~~~~~~~i~ 225 (462)
.+.|..... ....++ +++++||+||.++|.... .+++++|.++++++++|+ .++++.+..+.+ .
T Consensus 102 ~~~G~l~~~~~~~~~~~i~~t~dl-~al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~~ia~---~ 177 (460)
T 3k6j_A 102 KSFKRLNDKRIEKINANLKITSDF-HKLSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNEISS---V 177 (460)
T ss_dssp HHTTSCCHHHHHHHHTTEEEESCG-GGCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHHT---T
T ss_pred HHcCCCCHHHHHHHhcceEEeCCH-HHHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHHHHHH---h
Confidence 445532100 013455 478999999999997543 468899999999999985 567777766654 3
Q ss_pred CCCCccEEecccCCCchhhHHhhhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhh
Q 012479 226 FPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGE 305 (462)
Q Consensus 226 ~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~aliav~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfge 305 (462)
++...+|+++||..|.+. +-..-+.+....+++.++.+..+++.+|... +.. .+ ..-|
T Consensus 178 ~~~p~r~iG~HffnPv~~--------------m~LvEIv~g~~Ts~e~~~~~~~l~~~lGk~~-v~v---~d--~pGf-- 235 (460)
T 3k6j_A 178 LRDPSNLVGIHFFNPANV--------------IRLVEIIYGSHTSSQAIATAFQACESIKKLP-VLV---GN--CKSF-- 235 (460)
T ss_dssp SSSGGGEEEEECCSSTTT--------------CCEEEEECCSSCCHHHHHHHHHHHHHTTCEE-EEE---SS--CCHH--
T ss_pred ccCCcceEEEEecchhhh--------------CCEEEEEeCCCCCHHHHHHHHHHHHHhCCEE-EEE---ec--ccHH--
Confidence 333458999999988764 1223356677889999999999999999742 212 11 1112
Q ss_pred hHhHHhHHHHHHHHHHHHHHHcCCCHHHHHHH
Q 012479 306 RGILLGAVHGIVESLFRRFTENGMNEDLAYKN 337 (462)
Q Consensus 306 qtvL~G~~paliea~~d~~v~~G~~~e~A~~~ 337 (462)
+..-.+.+++...+..+.+.|.++++....
T Consensus 236 --i~Nril~~~~~EA~~l~~~~Ga~~e~ID~a 265 (460)
T 3k6j_A 236 --VFNRLLHVYFDQSQKLMYEYGYLPHQIDKI 265 (460)
T ss_dssp --HHHHHHHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 122222234444444455899999887764
No 30
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.51 E-value=3.5e-13 Score=131.15 Aligned_cols=156 Identities=14% Similarity=0.096 Sum_probs=105.3
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCC--------CcCCHhhhhc---cC
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG--------TLGDIYETIS---GS 179 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~--------~~~~~~eav~---~A 179 (462)
++||+|||+|+||.++|.+|.++ |++|++.+|+. +..+...+.|+...+. ...+..++.+ ++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~r~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQG------GNDVTLIDQWP-AHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQV 75 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH-HHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCC
T ss_pred CCeEEEECcCHHHHHHHHHHHhC------CCcEEEEECCH-HHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCC
Confidence 47999999999999999999998 99888776653 3455555557543100 0113344444 89
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCCcEEEE-eccchH-HHhhhccccCCCCccEEecccC------CCchhhHHhhhcC
Q 012479 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGL-SHGFLL-GHLQSMGLDFPKNIGVIAVCPK------GMGPSVRRLYVQG 251 (462)
Q Consensus 180 DvViLavpd~a~~~vl~eI~~~Lk~gaiL~~-a~G~~i-~~~~~~~i~~p~~v~VV~v~Pn------gpg~~vr~lf~~G 251 (462)
|+||+++|+....++++++.++++++++|++ +.|+.. ..+.+ .+++. +|+..+|. +|+...
T Consensus 76 d~vi~~v~~~~~~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~~---~~~~~-~vi~g~~~~~~~~~~p~~~~------- 144 (316)
T 2ew2_A 76 DLIIALTKAQQLDAMFKAIQPMITEKTYVLCLLNGLGHEDVLEK---YVPKE-NILVGITMWTAGLEGPGRVK------- 144 (316)
T ss_dssp SEEEECSCHHHHHHHHHHHGGGCCTTCEEEECCSSSCTHHHHTT---TSCGG-GEEEEEECCCCEEEETTEEE-------
T ss_pred CEEEEEeccccHHHHHHHHHHhcCCCCEEEEecCCCCcHHHHHH---HcCCc-cEEEEEeeeeeEEcCCCEEE-------
Confidence 9999999999999999999999999987654 467754 34433 33433 56643321 222221
Q ss_pred ccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCC
Q 012479 252 KEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (462)
Q Consensus 252 ~~~~G~Gv~aliav~qd~tgea~e~a~al~~aiG~~ 287 (462)
..+.|.+.+ .+....+.+..+.+..+++.+|..
T Consensus 145 --~~~~g~~~i-~~~~~~~~~~~~~~~~ll~~~g~~ 177 (316)
T 2ew2_A 145 --LLGDGEIEL-ENIDPSGKKFALEVVDVFQKAGLN 177 (316)
T ss_dssp --ECSCCCEEE-EESSGGGHHHHHHHHHHHHHTTCC
T ss_pred --EecCCcEEE-eecCCCccHHHHHHHHHHHhCCCC
Confidence 013677774 444445678889999999999964
No 31
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.51 E-value=1.7e-13 Score=134.02 Aligned_cols=201 Identities=13% Similarity=0.035 Sum_probs=127.7
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecch-
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA- 189 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~- 189 (462)
|+||+|||+|+||.++|++|.+. |++|++++|+.++ .+...+.|+.. ..+++|++++||+||+++|+.
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~------G~~V~~~dr~~~~-~~~~~~~g~~~----~~~~~~~~~~advvi~~v~~~~ 69 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRA------GFDVTVWNRNPAK-CAPLVALGARQ----ASSPAEVCAACDITIAMLADPA 69 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHH------TCCEEEECSSGGG-GHHHHHHTCEE----CSCHHHHHHHCSEEEECCSSHH
T ss_pred CCeEEEEccCHHHHHHHHHHHHC------CCeEEEEcCCHHH-HHHHHHCCCee----cCCHHHHHHcCCEEEEEcCCHH
Confidence 57999999999999999999999 9998877766444 45555668775 678999999999999999986
Q ss_pred hHHHHH---HHHHhcCCCCcEEEEeccchHH---HhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceEEE
Q 012479 190 AQADNY---EKIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSF 263 (462)
Q Consensus 190 a~~~vl---~eI~~~Lk~gaiL~~a~G~~i~---~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~ali 263 (462)
...+++ +++.+.+++|++|++++..... .+.+ .....++.++.. |...+.. .-. .|...++
T Consensus 70 ~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~--~~~~~g~~~~~~-pv~g~~~---~a~-------~g~l~~~ 136 (287)
T 3pdu_A 70 AAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGA--AVTARGGRFLEA-PVSGTKK---PAE-------DGTLIIL 136 (287)
T ss_dssp HHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHH--HHHHTTCEEEEC-CEECCHH---HHH-------HTCEEEE
T ss_pred HHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHH--HHHHcCCEEEEC-CccCCHH---HHh-------cCCEEEE
Confidence 566788 7789999999999888775432 1111 011235666653 5432221 111 2444434
Q ss_pred eeccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Q 012479 264 AVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVE 340 (462)
Q Consensus 264 av~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~paliea~~d~~v~~G~~~e~A~~~~~e 340 (462)
+ .. +.+..+.++.+++.+|.. ++...-...-..-.+.... +.+...+++.-++..+.+.|++++..+...-+
T Consensus 137 ~-gg--~~~~~~~~~~ll~~~g~~-~~~~g~~g~~~~~Kl~~N~-~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~ 208 (287)
T 3pdu_A 137 A-AG--DQSLFTDAGPAFAALGKK-CLHLGEVGQGARMKLVVNM-IMGQMMTALGEGMALGRNCGLDGGQLLEVLDA 208 (287)
T ss_dssp E-EE--CHHHHHHTHHHHHHHEEE-EEECSSTTHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred E-eC--CHHHHHHHHHHHHHhCCC-EEEcCCCChHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 3 33 578999999999999963 2222100000000011111 11122223333355678999999988774443
No 32
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.50 E-value=5.2e-13 Score=132.51 Aligned_cols=200 Identities=15% Similarity=0.035 Sum_probs=127.5
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecch-
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA- 189 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~- 189 (462)
|+||+|||+|+||.++|++|.+. |++|++++|..+ ..+...+.|+.. ..+..|++++||+||+++|+.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~------G~~V~~~dr~~~-~~~~l~~~g~~~----~~~~~~~~~~aDvvi~~vp~~~ 89 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKN------GFKVTVWNRTLS-KCDELVEHGASV----CESPAEVIKKCKYTIAMLSDPC 89 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSGG-GGHHHHHTTCEE----CSSHHHHHHHCSEEEECCSSHH
T ss_pred CCEEEEECccHHHHHHHHHHHHC------CCeEEEEeCCHH-HHHHHHHCCCeE----cCCHHHHHHhCCEEEEEcCCHH
Confidence 38999999999999999999999 999887766544 455556778875 678999999999999999975
Q ss_pred hHHHHH---HHHHhcCCCCcEEEEeccchHHHhhh-ccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceEEEee
Q 012479 190 AQADNY---EKIFSCMKPNSILGLSHGFLLGHLQS-MGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (462)
Q Consensus 190 a~~~vl---~eI~~~Lk~gaiL~~a~G~~i~~~~~-~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~aliav 265 (462)
...+++ +++.+.+++|++|+++++........ .......++.++. +|...+.. ..+ .|...+++
T Consensus 90 ~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~-~pv~g~~~--~a~--------~g~l~i~~- 157 (310)
T 3doj_A 90 AALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVE-GPVSGSKK--PAE--------DGQLIILA- 157 (310)
T ss_dssp HHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHH--HHH--------HTCEEEEE-
T ss_pred HHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEe-CCCCCChh--HHh--------cCCeEEEE-
Confidence 556788 67899999999999888764322110 0011123566766 67432222 111 24544444
Q ss_pred ccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHHHHHHHHHHHHHcCCCHHHHHHH
Q 012479 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKN 337 (462)
Q Consensus 266 ~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~paliea~~d~~v~~G~~~e~A~~~ 337 (462)
.. +.+..+.+..+++.+|.. ++...-...-..-.+-... +.+...+++.-++..+.+.|+++++.+..
T Consensus 158 gg--~~~~~~~~~~ll~~~g~~-~~~~g~~g~a~~~Kl~~N~-~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~ 225 (310)
T 3doj_A 158 AG--DKALFEESIPAFDVLGKR-SFYLGQVGNGAKMKLIVNM-IMGSMMNAFSEGLVLADKSGLSSDTLLDI 225 (310)
T ss_dssp EE--CHHHHHHHHHHHHHHEEE-EEECSSTTHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred cC--CHHHHHHHHHHHHHhCCC-EEEeCCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 33 478999999999999963 2222100000000011111 11122223333445677899999877663
No 33
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.50 E-value=4.2e-13 Score=133.81 Aligned_cols=194 Identities=18% Similarity=0.237 Sum_probs=126.4
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecchh
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~a 190 (462)
|+||||||+|+||.++|+||.++ |++|++++|+.+ ..+...+.|... ..++.|++++||+||+++|+..
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~------G~~v~v~dr~~~-~~~~l~~~Ga~~----a~s~~e~~~~~dvv~~~l~~~~ 71 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKA------GYLLNVFDLVQS-AVDGLVAAGASA----ARSARDAVQGADVVISMLPASQ 71 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT------TCEEEEECSSHH-HHHHHHHTTCEE----CSSHHHHHTTCSEEEECCSCHH
T ss_pred cCEEEEeeehHHHHHHHHHHHhC------CCeEEEEcCCHH-HHHHHHHcCCEE----cCCHHHHHhcCCceeecCCchH
Confidence 68999999999999999999999 999988877644 456666788886 7899999999999999999887
Q ss_pred HH-HHHHH---HHhcCCCCcEEEEeccchHH---HhhhccccCCCCccEEecccC--CCchhhHHhhhcCccccCCCceE
Q 012479 191 QA-DNYEK---IFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPK--GMGPSVRRLYVQGKEINGAGINS 261 (462)
Q Consensus 191 ~~-~vl~e---I~~~Lk~gaiL~~a~G~~i~---~~~~~~i~~p~~v~VV~v~Pn--gpg~~vr~lf~~G~~~~G~Gv~a 261 (462)
+. +|+.. +.+.+++|++|++++-.... .+.+ ..-..++.++- +|- +|... + .|--.
T Consensus 72 ~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~--~~~~~G~~~lD-aPVsGg~~~A-----~-------~G~L~ 136 (300)
T 3obb_A 72 HVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHA--AARERGLAMLD-APVSGGTAGA-----A-------AGTLT 136 (300)
T ss_dssp HHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHH--HHHTTTCEEEE-CCEESCHHHH-----H-------HTCEE
T ss_pred HHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHH--HHHHcCCEEEe-cCCCCCHHHH-----H-------hCCEE
Confidence 75 57752 78899999999988765322 2211 11134666664 342 22222 1 24434
Q ss_pred EEeeccCCCHHHHHHHHHHHHHhCCCcccccc-hhhhccccchhhhHhHHhHHHHHHHHHHHHHHHcCCCHHHHHH
Q 012479 262 SFAVHQDVDGRATNVALGWSVALGSPFTFATT-LEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYK 336 (462)
Q Consensus 262 liav~qd~tgea~e~a~al~~aiG~~~viett-f~~E~~~dlfgeqtvL~G~~paliea~~d~~v~~G~~~e~A~~ 336 (462)
+++ .. +.++.+.++.+++.+|.. ++..- .-.=.... +--+.++.+...++.|++ ..+.+.|++++..+.
T Consensus 137 imv-GG--~~~~~~~~~p~l~~~g~~-i~~~G~~G~g~~~K-l~~N~l~~~~~~a~aEa~-~la~~~Gld~~~~~~ 206 (300)
T 3obb_A 137 FMV-GG--DAEALEKARPLFEAMGRN-IFHAGPDGAGQVAK-VCNNQLLAVLMIGTAEAM-ALGVANGLEAKVLAE 206 (300)
T ss_dssp EEE-ES--CHHHHHHHHHHHHHHEEE-EEEEESTTHHHHHH-HHHHHHHHHHHHHHHHHH-HHHHHTTCCHHHHHH
T ss_pred EEE-eC--CHHHHHHHHHHHHHhCCC-EEEeCCccHHHHHH-HHHHHHHHHHHHHHHHHH-HHHHhcCCCHHHHHH
Confidence 333 44 578999999999999963 22111 00000011 111222333344455554 356789999986554
No 34
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.49 E-value=2.4e-12 Score=128.34 Aligned_cols=204 Identities=13% Similarity=0.086 Sum_probs=138.3
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHc-------CceecCCCcCCHhhhhccCCeEEE
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-------GFTEENGTLGDIYETISGSDLVLL 184 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~-------G~~~~d~~~~~~~eav~~ADvViL 184 (462)
|+|+|||+|.||.+||++|. + |++|++++++ ....+.+.+. ++.. ..++++ +++||+||.
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a------G~~V~v~d~~-~~~~~~~~~~l~~~~~~~i~~----~~~~~~-~~~aDlVie 79 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S------KHEVVLQDVS-EKALEAAREQIPEELLSKIEF----TTTLEK-VKDCDIVME 79 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T------TSEEEEECSC-HHHHHHHHHHSCGGGGGGEEE----ESSCTT-GGGCSEEEE
T ss_pred CeEEEEeeCHHHHHHHHHHH-c------CCEEEEEECC-HHHHHHHHHHHHHHHhCCeEE----eCCHHH-HcCCCEEEE
Confidence 89999999999999999999 9 9998877665 4445666665 5553 456665 899999999
Q ss_pred eecchhH--HHHHHHHHhcCCCCcEEE-EeccchHHHhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceE
Q 012479 185 LISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINS 261 (462)
Q Consensus 185 avpd~a~--~~vl~eI~~~Lk~gaiL~-~a~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~a 261 (462)
++|+... ..++.++.+. ++++|+ .++++++..+.. ......+++.+||.-|.+. +-..
T Consensus 80 avpe~~~vk~~l~~~l~~~--~~~IlasntSti~~~~~a~---~~~~~~r~~G~Hf~~Pv~~--------------~~lv 140 (293)
T 1zej_A 80 AVFEDLNTKVEVLREVERL--TNAPLCSNTSVISVDDIAE---RLDSPSRFLGVHWMNPPHV--------------MPLV 140 (293)
T ss_dssp CCCSCHHHHHHHHHHHHTT--CCSCEEECCSSSCHHHHHT---TSSCGGGEEEEEECSSTTT--------------CCEE
T ss_pred cCcCCHHHHHHHHHHHhcC--CCCEEEEECCCcCHHHHHH---HhhcccceEeEEecCcccc--------------CCEE
Confidence 9998875 3477787665 898874 677777765543 2223347999999877543 3455
Q ss_pred EEeeccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 012479 262 SFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVEC 341 (462)
Q Consensus 262 liav~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~paliea~~d~~v~~G~~~e~A~~~~~e~ 341 (462)
.+.+....+++.++.+..+++.+|.. ++.. .+. ...-+ ++ .+.+.||+. +++.|+++++-....-..
T Consensus 141 eiv~g~~t~~~~~~~~~~l~~~lGk~-~v~v---~d~---fi~Nr-ll---~~~~~EA~~--l~~~Gv~~e~id~~~~~g 207 (293)
T 1zej_A 141 EIVISRFTDSKTVAFVEGFLRELGKE-VVVC---KGQ---SLVNR-FN---AAVLSEASR--MIEEGVRAEDVDRVWKHH 207 (293)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHTTCE-EEEE---ESS---CHHHH-HH---HHHHHHHHH--HHHHTCCHHHHHHHHHTT
T ss_pred EEECCCCCCHHHHHHHHHHHHHcCCe-EEEe---ccc---ccHHH-HH---HHHHHHHHH--HHHhCCCHHHHHHHHHhc
Confidence 56777788999999999999999964 2222 121 12122 22 244666655 455599998766633211
Q ss_pred ----H--HHHHHHHHHHhcHHHHHHh
Q 012479 342 ----I--TGIISKIISTQGMLAVYNS 361 (462)
Q Consensus 342 ----i--~Gli~~li~e~G~~~m~~~ 361 (462)
+ .| --+++-..|++..++.
T Consensus 208 ~g~~~~~~G-P~~l~D~~Gld~~~~~ 232 (293)
T 1zej_A 208 LGLLYTLFG-PLGNLDYIGLDVAYYA 232 (293)
T ss_dssp HHHHHHHHH-HHHHHHHHCHHHHHHH
T ss_pred CCCCCCCCC-HHHHHHHhchHHHHHH
Confidence 1 24 3556667777655443
No 35
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.48 E-value=5.2e-13 Score=131.76 Aligned_cols=198 Identities=16% Similarity=0.129 Sum_probs=127.8
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecch-h
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA-A 190 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~-a 190 (462)
+||+|||+|+||.++|++|.+. |++|++++|+ ....+...+.|... ...+++|++++||+||+++|+. .
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~-~~~~~~~~~~g~~~---~~~~~~e~~~~aDvvi~~vp~~~~ 77 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA------GLSTWGADLN-PQACANLLAEGACG---AAASAREFAGVVDALVILVVNAAQ 77 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCSE---EESSSTTTTTTCSEEEECCSSHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC------CCeEEEEECC-HHHHHHHHHcCCcc---ccCCHHHHHhcCCEEEEECCCHHH
Confidence 7899999999999999999999 9998877665 44456666667652 0357889999999999999986 4
Q ss_pred HHHHH---HHHHhcCCCCcEEEEeccchHH---HhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceEEEe
Q 012479 191 QADNY---EKIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (462)
Q Consensus 191 ~~~vl---~eI~~~Lk~gaiL~~a~G~~i~---~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~alia 264 (462)
...++ +++.+.+++|++|++++..... .+.+ .....++.++. +|...+... -. .|...+++
T Consensus 78 ~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~--~~~~~g~~~~~-~pv~g~~~~---a~-------~g~l~~~~ 144 (303)
T 3g0o_A 78 VRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAA--ALTALNLNMLD-APVSGGAVK---AA-------QGEMTVMA 144 (303)
T ss_dssp HHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHH--HHHTTTCEEEE-CCEESCHHH---HH-------TTCEEEEE
T ss_pred HHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHH--HHHHcCCeEEe-CCCCCChhh---hh-------cCCeEEEe
Confidence 56676 6788999999999988876432 2211 11123567777 785433331 11 35555444
Q ss_pred eccCCCHHHHHHHHHHHHHhCCCcccccc--hhhhccccchhhhHhHHhHHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 012479 265 VHQDVDGRATNVALGWSVALGSPFTFATT--LEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNT 338 (462)
Q Consensus 265 v~qd~tgea~e~a~al~~aiG~~~viett--f~~E~~~dlfgeqtvL~G~~paliea~~d~~v~~G~~~e~A~~~~ 338 (462)
.. +.+..+.++.+++.+|.. ++.+. ...-... .+-... +.+...+++.-++..+.+.|+++++.+...
T Consensus 145 -gg--~~~~~~~~~~ll~~~g~~-~~~~~~~~g~a~~~-Kl~~N~-~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~ 214 (303)
T 3g0o_A 145 -SG--SEAAFTRLKPVLDAVASN-VYRISDTPGAGSTV-KIIHQL-LAGVHIAAAAEAMALAARAGIPLDVMYDVV 214 (303)
T ss_dssp -EC--CHHHHHHHHHHHHHHEEE-EEEEESSTTHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred -CC--CHHHHHHHHHHHHHHCCC-EEECCCCCcHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 33 578999999999999963 22221 0000000 111111 222222333334456788999998877643
No 36
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.47 E-value=4e-13 Score=132.69 Aligned_cols=198 Identities=16% Similarity=0.109 Sum_probs=129.0
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeec-chh
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS-DAA 190 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavp-d~a 190 (462)
+||+|||+|.||.++|.+|.+. |++|+++++...+ .+...+.|+.. ..+..++++++|+||+++| +..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~------g~~V~~~~~~~~~-~~~~~~~g~~~----~~~~~~~~~~~DvVi~av~~~~~ 99 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM------GHTVTVWNRTAEK-CDLFIQEGARL----GRTPAEVVSTCDITFACVSDPKA 99 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEECSSGGG-GHHHHHTTCEE----CSCHHHHHHHCSEEEECCSSHHH
T ss_pred CeEEEEcccHHHHHHHHHHHhC------CCEEEEEeCCHHH-HHHHHHcCCEE----cCCHHHHHhcCCEEEEeCCCHHH
Confidence 7899999999999999999998 8888777665443 44555578764 5678899999999999999 677
Q ss_pred HHHHHHH---HHhcCCCCcEEEEeccchH---HHhhhccccC-CCCccEEecccC--CCchhhHHhhhcCccccCCCceE
Q 012479 191 QADNYEK---IFSCMKPNSILGLSHGFLL---GHLQSMGLDF-PKNIGVIAVCPK--GMGPSVRRLYVQGKEINGAGINS 261 (462)
Q Consensus 191 ~~~vl~e---I~~~Lk~gaiL~~a~G~~i---~~~~~~~i~~-p~~v~VV~v~Pn--gpg~~vr~lf~~G~~~~G~Gv~a 261 (462)
..+++.+ +.+.++++++|++++.... ..+.+ .+ ..++.++.. |. +|... . .|...
T Consensus 100 ~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~---~~~~~~~~~v~~-p~~g~~~~~-----~-------~g~~~ 163 (316)
T 2uyy_A 100 AKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQ---VIVSRGGRFLEA-PVSGNQQLS-----N-------DGMLV 163 (316)
T ss_dssp HHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHH---HHHHTTCEEEEC-CEESCHHHH-----H-------HTCEE
T ss_pred HHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHH---HHHHcCCEEEEc-CccCChhHH-----h-------hCCEE
Confidence 7788875 4488999998887765532 22222 12 134566643 43 22221 1 35555
Q ss_pred EEeeccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHH-HHHHHHHHHHHcCCCHHHHHHHHHH
Q 012479 262 SFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG-IVESLFRRFTENGMNEDLAYKNTVE 340 (462)
Q Consensus 262 liav~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~pa-liea~~d~~v~~G~~~e~A~~~~~e 340 (462)
+++.. +.+..+.+..+++.+|...+..... +...........++++... +.|++.. +.+.|+++++++....+
T Consensus 164 ~~~~g---~~~~~~~v~~ll~~~g~~~~~~~~~--~~~~~~K~~~n~~~~~~~~~~~Ea~~l-a~~~G~~~~~~~~~~~~ 237 (316)
T 2uyy_A 164 ILAAG---DRGLYEDCSSCFQAMGKTSFFLGEV--GNAAKMMLIVNMVQGSFMATIAEGLTL-AQVTGQSQQTLLDILNQ 237 (316)
T ss_dssp EEEEE---CHHHHHHTHHHHHHHEEEEEECSST--THHHHHHHHHHHHHHHHHHHHHHHHHH-HHHTTCCHHHHHHHHHH
T ss_pred EEeCC---CHHHHHHHHHHHHHhcCCEEEeCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHc
Confidence 44333 4688899999999999642111110 1111111223445565444 5555554 89999999988876655
Q ss_pred HH
Q 012479 341 CI 342 (462)
Q Consensus 341 ~i 342 (462)
+.
T Consensus 238 ~~ 239 (316)
T 2uyy_A 238 GQ 239 (316)
T ss_dssp ST
T ss_pred CC
Confidence 43
No 37
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.47 E-value=3.9e-13 Score=130.99 Aligned_cols=199 Identities=15% Similarity=0.061 Sum_probs=121.4
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecc-hh
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD-AA 190 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd-~a 190 (462)
|||+|||+|+||.+++.+|.+. |++|+++++.. +..+...+.|+.. ..+++++++++|+||+++|+ ..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~------g~~V~~~~~~~-~~~~~~~~~g~~~----~~~~~~~~~~~Dvvi~~vp~~~~ 69 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKH------GYPLIIYDVFP-DACKEFQDAGEQV----VSSPADVAEKADRIITMLPTSIN 69 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHT------TCCEEEECSST-HHHHHHHTTTCEE----CSSHHHHHHHCSEEEECCSSHHH
T ss_pred CeEEEEeccHHHHHHHHHHHHC------CCEEEEEeCCH-HHHHHHHHcCCee----cCCHHHHHhcCCEEEEeCCCHHH
Confidence 5799999999999999999998 88887776654 3455556668764 56888999999999999975 45
Q ss_pred HHHHHHH---HHhcCCCCcEEEEeccchHHHhhhccccCCC-CccEEecccCCCchhhHHhhhcCccccCCCceEEEeec
Q 012479 191 QADNYEK---IFSCMKPNSILGLSHGFLLGHLQSMGLDFPK-NIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (462)
Q Consensus 191 ~~~vl~e---I~~~Lk~gaiL~~a~G~~i~~~~~~~i~~p~-~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~aliav~ 266 (462)
..+++.+ +.+++++|++|++++|+...........+++ .+. +|+.|...-..... .|...++ +.
T Consensus 70 ~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g~~----~~~~p~~~g~~~a~-------~~~~~~~-~~ 137 (296)
T 2gf2_A 70 AIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAV----FMDAPVSGGVGAAR-------SGNLTFM-VG 137 (296)
T ss_dssp HHHHHHSTTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE----EEECCEESHHHHHH-------HTCEEEE-EE
T ss_pred HHHHHhCchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE----EEEcCCCCChhHHh-------cCcEEEE-eC
Confidence 5677775 5567899998888888865332210001121 222 23333322111122 2454433 33
Q ss_pred cCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHHHHHHHHHHHHHcCCCHHHHHHH
Q 012479 267 QDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKN 337 (462)
Q Consensus 267 qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~paliea~~d~~v~~G~~~e~A~~~ 337 (462)
.+.+..+.+..+++.+|.. ++.+.....-..-.+............+.|++. .+.+.|++++.++..
T Consensus 138 --~~~~~~~~v~~l~~~~g~~-~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~-~~~~~G~~~~~~~~~ 204 (296)
T 2gf2_A 138 --GVEDEFAAAQELLGCMGSN-VVYCGAVGTGQAAKICNNMLLAISMIGTAEAMN-LGIRLGLDPKLLAKI 204 (296)
T ss_dssp --SCGGGHHHHHHHHTTTEEE-EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHTTCCHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHHcCC-eEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCHHHHHHH
Confidence 3578899999999999964 222111000000000011111122234556655 888999999877764
No 38
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.45 E-value=2.3e-12 Score=136.40 Aligned_cols=214 Identities=12% Similarity=0.126 Sum_probs=141.2
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHH-----------cCceecC---------CCcC
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----------AGFTEEN---------GTLG 170 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~-----------~G~~~~d---------~~~~ 170 (462)
++||+|||+|+||.++|.+|.++ |++|++.+++ .+..+.+.+ .|..... ....
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~a------G~~V~l~D~~-~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 77 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASH------GHQVLLYDIS-AEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVT 77 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT------TCCEEEECSC-HHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC------CCeEEEEECC-HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeC
Confidence 37999999999999999999999 9998877655 333444432 3321000 0134
Q ss_pred CHhhhhccCCeEEEeecchhH--HHHHHHHHhcCCCCcEE-EEeccchHHHhhhccccCCCCccEEecccCCCchhhHHh
Q 012479 171 DIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSIL-GLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRL 247 (462)
Q Consensus 171 ~~~eav~~ADvViLavpd~a~--~~vl~eI~~~Lk~gaiL-~~a~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~l 247 (462)
+. +++++||+||+++|+... .++++++.++++++++| +.++++.+..+.. .++...++++.||..|.+..
T Consensus 78 ~~-~~~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i~~ia~---~~~~p~~~ig~hf~~Pa~v~--- 150 (483)
T 3mog_A 78 DI-HALAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISITAIAA---EIKNPERVAGLHFFNPAPVM--- 150 (483)
T ss_dssp CG-GGGGGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTT---TSSSGGGEEEEEECSSTTTC---
T ss_pred CH-HHhcCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCHHHHHH---HccCccceEEeeecChhhhC---
Confidence 45 478999999999998854 47899999999999987 5788888866554 33344689999999988761
Q ss_pred hhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHHHHHHHHHHHHHc
Q 012479 248 YVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTEN 327 (462)
Q Consensus 248 f~~G~~~~G~Gv~aliav~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~paliea~~d~~v~~ 327 (462)
--..++.+...+.+.++.+..+++.+|... +.. .+.. -| +..-.+.+++...+..+.+.
T Consensus 151 -----------~Lvevv~g~~Ts~e~~~~~~~l~~~lGk~~-v~v---~d~~--Gf----i~Nr~l~~~~~Ea~~l~~~g 209 (483)
T 3mog_A 151 -----------KLVEVVSGLATAAEVVEQLCELTLSWGKQP-VRC---HSTP--GF----IVNRVARPYYSEAWRALEEQ 209 (483)
T ss_dssp -----------CEEEEEECSSCCHHHHHHHHHHHHHTTCEE-EEE---ESCT--TT----THHHHTHHHHHHHHHHHHTT
T ss_pred -----------CeEEEecCCCCCHHHHHHHHHHHHHhCCEE-EEE---eccC--cc----hHHHHHHHHHHHHHHHHHhC
Confidence 233366677889999999999999999642 211 1111 11 11222233455555556666
Q ss_pred CCCHHHHHHHHHHHH---HHHHHHHHHHhcHHHHHH
Q 012479 328 GMNEDLAYKNTVECI---TGIISKIISTQGMLAVYN 360 (462)
Q Consensus 328 G~~~e~A~~~~~e~i---~Gli~~li~e~G~~~m~~ 360 (462)
|.++++-....-... .| --.++-..|++..+.
T Consensus 210 ~~~~~~id~a~~~~~G~p~G-P~~l~D~~Gld~~~~ 244 (483)
T 3mog_A 210 VAAPEVIDAALRDGAGFPMG-PLELTDLIGQDVNFA 244 (483)
T ss_dssp CSCHHHHHHHHHHTTCCSSC-HHHHHHHHCHHHHHH
T ss_pred CCCHHHHHHHHHhcCCCCCC-HHHHHHHhchHHHHH
Confidence 777887665322111 13 344555667755443
No 39
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.44 E-value=1.9e-12 Score=127.57 Aligned_cols=193 Identities=12% Similarity=0.083 Sum_probs=124.5
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecch-h
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA-A 190 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~-a 190 (462)
+||+|||+|.||.++|++|.+. |++|++++++.++ .+.+.+.|+.. ..+++|+++ ||+||+++|+. .
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~------G~~V~~~dr~~~~-~~~~~~~g~~~----~~~~~~~~~-aDvvi~~vp~~~~ 83 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW------PGGVTVYDIRIEA-MTPLAEAGATL----ADSVADVAA-ADLIHITVLDDAQ 83 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS------TTCEEEECSSTTT-SHHHHHTTCEE----CSSHHHHTT-SSEEEECCSSHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHC------CCeEEEEeCCHHH-HHHHHHCCCEE----cCCHHHHHh-CCEEEEECCChHH
Confidence 6899999999999999999998 9998877765444 55566678875 678999999 99999999965 5
Q ss_pred HHHHHHHHHhcCCCCcEEEEeccchHH---HhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceEEEeecc
Q 012479 191 QADNYEKIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ 267 (462)
Q Consensus 191 ~~~vl~eI~~~Lk~gaiL~~a~G~~i~---~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~aliav~q 267 (462)
..++++++.+++++|++|++.+..... .+.+ .....++.++. +|...+... -. .|...+++ ..
T Consensus 84 ~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~--~~~~~g~~~~~-~pv~g~~~~---a~-------~g~l~~~~-gg 149 (296)
T 3qha_A 84 VREVVGELAGHAKPGTVIAIHSTISDTTAVELAR--DLKARDIHIVD-APVSGGAAA---AA-------RGELATMV-GA 149 (296)
T ss_dssp HHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHH--HHGGGTCEEEE-CCEESCHHH---HH-------HTCEEEEE-EC
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHH--HHHHcCCEEEe-CCCcCCHHH---Hh-------cCCccEEe-cC
Confidence 567899999999999999988876432 1211 11123566664 464322221 11 24444333 33
Q ss_pred CCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHHHHHHHHHHHHHcCCCHHHH
Q 012479 268 DVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLA 334 (462)
Q Consensus 268 d~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~paliea~~d~~v~~G~~~e~A 334 (462)
+.+..+.+..+++.+|.. ++.+.-...-..-.+-... +.+...+++.-++..+.+.|+++++.
T Consensus 150 --~~~~~~~~~~ll~~~g~~-~~~~g~~g~a~~~Kl~~N~-~~~~~~~~~~E~~~l~~~~G~d~~~~ 212 (296)
T 3qha_A 150 --DREVYERIKPAFKHWAAV-VIHAGEPGAGTRMKLARNM-LTFTSYAAACEAMKLAEAAGLDLQAL 212 (296)
T ss_dssp --CHHHHHHHHHHHHHHEEE-EEEEESTTHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred --CHHHHHHHHHHHHHHcCC-eEEcCChhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 578999999999999963 2222100000000111121 11222223344455678899999876
No 40
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.44 E-value=5.1e-13 Score=132.69 Aligned_cols=195 Identities=13% Similarity=0.136 Sum_probs=118.9
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecchhH
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~a~ 191 (462)
+||||||+|+||.++|+||.++ |++|++++|+.++ .+...+.|... ..++.|+++++|+||+++|+..+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~------G~~V~v~dr~~~~-~~~l~~~G~~~----~~s~~e~~~~~dvvi~~l~~~~~ 74 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA------GYELVVWNRTASK-AEPLTKLGATV----VENAIDAITPGGIVFSVLADDAA 74 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT------TCEEEEC--------CTTTTTTCEE----CSSGGGGCCTTCEEEECCSSHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHC------CCeEEEEeCCHHH-HHHHHHcCCeE----eCCHHHHHhcCCceeeeccchhh
Confidence 5899999999999999999999 9999888776444 44455678875 67899999999999999998776
Q ss_pred H-HHH-HHHHhcCCCCcEEEEeccchHH---HhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceEEEeec
Q 012479 192 A-DNY-EKIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (462)
Q Consensus 192 ~-~vl-~eI~~~Lk~gaiL~~a~G~~i~---~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~aliav~ 266 (462)
. +++ .++.+.+++|+++++.+-+... .+.+ .....++.++- +|-.-+... =. .|...++. .
T Consensus 75 ~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~--~~~~~g~~~ld-apVsGg~~~---a~-------~g~l~im~-g 140 (297)
T 4gbj_A 75 VEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQ--VHEWYGAHYVG-APIFARPEA---VR-------AKVGNICL-S 140 (297)
T ss_dssp HHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHH--HHHHTTCEEEE-CCEECCHHH---HH-------HTCCEEEE-E
T ss_pred HHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHH--HHHhcCCceec-CCcCCCccc---cc-------cccceeec-c
Confidence 5 454 4688999999999888765322 1111 11124566654 342211110 01 23434232 3
Q ss_pred cCCCHHHHHHHHHHHHHhCCCccccc--chhhhccccchhhhHhHHhHHHHHHHHHHHHHHHcCCCHHHHHH
Q 012479 267 QDVDGRATNVALGWSVALGSPFTFAT--TLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYK 336 (462)
Q Consensus 267 qd~tgea~e~a~al~~aiG~~~viet--tf~~E~~~dlfgeqtvL~G~~paliea~~d~~v~~G~~~e~A~~ 336 (462)
. +.++.+.++.+++.+|.. ++.. ..-.=.... +-.+..+.+...++.|+ +..+.+.|++++..+.
T Consensus 141 G--~~~~~~~~~~~l~~~g~~-i~~~g~~~G~g~~~K-l~~N~~~~~~~~~~aEa-~~la~~~Gld~~~~~~ 207 (297)
T 4gbj_A 141 G--NAGAKERIKPIVENFVKG-VFDFGDDPGAANVIK-LAGNFMIACSLEMMGEA-FTMAEKNGISRQSIYE 207 (297)
T ss_dssp E--CHHHHHHHHHHHHTTCSE-EEECCSCTTHHHHHH-HHHHHHHHHHHHHHHHH-HHHHHHTTCCHHHHHH
T ss_pred c--chhHHHHHHHHHHHhhCC-eEEecCCccHHHHHH-HHHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHH
Confidence 3 578999999999999964 2111 000000010 11122222222233333 3457789999997766
No 41
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.43 E-value=4.5e-12 Score=125.66 Aligned_cols=199 Identities=16% Similarity=0.062 Sum_probs=126.4
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecchh-
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA- 190 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~a- 190 (462)
+||+|||+|+||.++|++|++. |++|++++|+ ....+.+.+.|... ..++.|++++||+||+++|+..
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~------G~~V~~~dr~-~~~~~~~~~~g~~~----~~~~~e~~~~aDvVi~~vp~~~~ 78 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQ------GKRVAIWNRS-PGKAAALVAAGAHL----CESVKAALSASPATIFVLLDNHA 78 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEECSS-HHHHHHHHHHTCEE----CSSHHHHHHHSSEEEECCSSHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHCCCee----cCCHHHHHhcCCEEEEEeCCHHH
Confidence 8999999999999999999999 9998877665 44455556668775 6789999999999999999776
Q ss_pred HHHHHH--HHHhcCCCCcEEEEeccchHH---HhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceEEEee
Q 012479 191 QADNYE--KIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (462)
Q Consensus 191 ~~~vl~--eI~~~Lk~gaiL~~a~G~~i~---~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~aliav 265 (462)
..+++. .+.+ +++|++|++++..... .+.+ .....++.|+.. |...++.. . +.+-..+++
T Consensus 79 ~~~v~~~~~l~~-~~~g~ivid~st~~~~~~~~l~~--~~~~~g~~~vda-pv~g~~~~---~-------~~~~~~i~~- 143 (306)
T 3l6d_A 79 THEVLGMPGVAR-ALAHRTIVDYTTNAQDEGLALQG--LVNQAGGHYVKG-MIVAYPRN---V-------GHRESHSIH- 143 (306)
T ss_dssp HHHHHTSTTHHH-HTTTCEEEECCCCCTTHHHHHHH--HHHHTTCEEEEE-EEESCGGG---T-------TCTTCEEEE-
T ss_pred HHHHhcccchhh-ccCCCEEEECCCCCHHHHHHHHH--HHHHcCCeEEec-ccccCccc---c-------cCCceEEEE-
Confidence 567776 5644 5799999888876432 2111 011245677763 54322210 1 122223333
Q ss_pred ccCCCHHHHHHHHHHHHHhCCCcccccchhhhcc-ccchhhhHhHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 012479 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQEYR-SDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVECI 342 (462)
Q Consensus 266 ~qd~tgea~e~a~al~~aiG~~~viettf~~E~~-~dlfgeqtvL~G~~paliea~~d~~v~~G~~~e~A~~~~~e~i 342 (462)
.. +.++++.++.+++.+|. .++....-++.. --++. .++.+.+.++.|+ +..+.+.|++++..+....+..
T Consensus 144 gg--~~~~~~~~~~ll~~lg~-~~~~~~~g~~~g~g~~~k--~~~~~~~~~~~Ea-~~la~~~Gld~~~~~~~~~~~~ 215 (306)
T 3l6d_A 144 TG--DREAFEQHRALLEGLAG-HTVFLPWDEALAFATVLH--AHAFAAMVTFFEA-VGAGDRFGLPVSKTARLLLETS 215 (306)
T ss_dssp EE--CHHHHHHHHHHHHTTCS-EEEECCHHHHHHHHHHHH--HHHHHHHHHHHHH-HHHHHHTTCCHHHHHHHHHHHH
T ss_pred cC--CHHHHHHHHHHHHHhcC-CEEEecCCCCccHHHHHH--HHHHHHHHHHHHH-HHHHHHcCCCHHHHHHHHHHhh
Confidence 33 57899999999999976 333220001000 00121 2233333334443 4467899999999888655543
No 42
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.43 E-value=6.3e-13 Score=123.41 Aligned_cols=177 Identities=12% Similarity=0.062 Sum_probs=123.3
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcC-------ceecCCCcCCHhhhhccCCeEE
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-------FTEENGTLGDIYETISGSDLVL 183 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G-------~~~~d~~~~~~~eav~~ADvVi 183 (462)
|||+||| +|.||.+++..|.+. |++|++.+|+.++..+..+..| +. ..+..++++++|+||
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~D~Vi 69 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATL------GHEIVVGSRREEKAEAKAAEYRRIAGDASIT-----GMKNEDAAEACDIAV 69 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT------TCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-----EEEHHHHHHHCSEEE
T ss_pred CeEEEEcCCCHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHhccccccCCCC-----hhhHHHHHhcCCEEE
Confidence 5899999 999999999999998 8888887775443322232223 22 346778899999999
Q ss_pred EeecchhHHHHHHHHHhcCCCCcEEE-Eeccch--------------HHHhhhccccCCCCccEEecccCCCchhhHHhh
Q 012479 184 LLISDAAQADNYEKIFSCMKPNSILG-LSHGFL--------------LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLY 248 (462)
Q Consensus 184 Lavpd~a~~~vl~eI~~~Lk~gaiL~-~a~G~~--------------i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf 248 (462)
+++|+....++++++.+.++ +++|+ .+.|+. ...+.+ .+| +..|+.+||+.|+.......
T Consensus 70 ~~~~~~~~~~~~~~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~---~~~-~~~~v~~~~~~~~~~~~~~~ 144 (212)
T 1jay_A 70 LTIPWEHAIDTARDLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAE---VLE-SEKVVSALHTIPAARFANLD 144 (212)
T ss_dssp ECSCHHHHHHHHHHTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHH---HHT-CSCEEECCTTCCHHHHHCTT
T ss_pred EeCChhhHHHHHHHHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHH---hCC-CCeEEEEccchHHHHhhCcC
Confidence 99999998899998888774 77655 455665 344443 334 36899999998877643211
Q ss_pred hcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHh-CCCcccccchhhhccccchhhhHhHHhHHHHHHHHHHH
Q 012479 249 VQGKEINGAGINSSFAVHQDVDGRATNVALGWSVAL-GSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFR 322 (462)
Q Consensus 249 ~~G~~~~G~Gv~aliav~qd~tgea~e~a~al~~ai-G~~~viettf~~E~~~dlfgeqtvL~G~~paliea~~d 322 (462)
. .|-..+++... +.++.+.+..+++.+ |.. ++.. . -.+....+-++.|.++...++
T Consensus 145 ~-------~~~~~~~~~g~--~~~~~~~v~~l~~~~~G~~-~~~~---~-----~~~~a~~~k~~~~~~~~~~~~ 201 (212)
T 1jay_A 145 E-------KFDWDVPVCGD--DDESKKVVMSLISEIDGLR-PLDA---G-----PLSNSRLVESLTPLILNIMRF 201 (212)
T ss_dssp C-------CCCEEEEEEES--CHHHHHHHHHHHHHSTTEE-EEEE---E-----SGGGHHHHHTHHHHHHHHHHH
T ss_pred C-------CCCccEEEECC--cHHHHHHHHHHHHHcCCCC-ceec---c-----chhHHHHhcchHHHHHHHHHH
Confidence 1 23333344443 688999999999999 963 1111 1 135666788888988776663
No 43
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.41 E-value=2e-12 Score=136.72 Aligned_cols=194 Identities=12% Similarity=0.056 Sum_probs=124.8
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHc---CceecCCCcCCHhhhhcc---CCeEEEe
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA---GFTEENGTLGDIYETISG---SDLVLLL 185 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~---G~~~~d~~~~~~~eav~~---ADvViLa 185 (462)
++|+|||+|+||.++|++|.++ |++|++++|+.++..+...+. |+.. ..+++|++++ +|+||++
T Consensus 16 ~~IgvIGlG~MG~~lA~~La~~------G~~V~v~~r~~~~~~~l~~~~~~~gi~~----~~s~~e~v~~l~~aDvVil~ 85 (480)
T 2zyd_A 16 QQIGVVGMAVMGRNLALNIESR------GYTVSIFNRSREKTEEVIAENPGKKLVP----YYTVKEFVESLETPRRILLM 85 (480)
T ss_dssp BSEEEECCSHHHHHHHHHHHTT------TCCEEEECSSHHHHHHHHHHSTTSCEEE----CSSHHHHHHTBCSSCEEEEC
T ss_pred CeEEEEccHHHHHHHHHHHHhC------CCeEEEEeCCHHHHHHHHhhCCCCCeEE----eCCHHHHHhCCCCCCEEEEE
Confidence 7899999999999999999999 999888777654433333332 7764 5688898887 9999999
Q ss_pred ecc-hhHHHHHHHHHhcCCCCcEEEEec-cch--HHHhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceE
Q 012479 186 ISD-AAQADNYEKIFSCMKPNSILGLSH-GFL--LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINS 261 (462)
Q Consensus 186 vpd-~a~~~vl~eI~~~Lk~gaiL~~a~-G~~--i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~a 261 (462)
||+ +...++++++.+++++|++|++++ |.. ...+.+ .....++.++ .+|...+... .. .|. +
T Consensus 86 Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~--~l~~~g~~~v-~~pv~gg~~~---a~-------~g~-~ 151 (480)
T 2zyd_A 86 VKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNR--ELSAEGFNFI-GTGVSGGEEG---AL-------KGP-S 151 (480)
T ss_dssp SCSSSHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHH--HHHHTTCEEE-EEEEESHHHH---HH-------HCC-E
T ss_pred CCCHHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHH--HHHHCCCCee-CCccccCHhH---Hh-------cCC-e
Confidence 999 577889999999999999887665 432 122222 1112356676 4576433331 12 245 4
Q ss_pred EEeeccCCCHHHHHHHHHHHHHhCCCc------ccccchhhhccccchhhhHhH-HhH-HHHHHHHHHHH---HHH-cCC
Q 012479 262 SFAVHQDVDGRATNVALGWSVALGSPF------TFATTLEQEYRSDIFGERGIL-LGA-VHGIVESLFRR---FTE-NGM 329 (462)
Q Consensus 262 liav~qd~tgea~e~a~al~~aiG~~~------viettf~~E~~~dlfgeqtvL-~G~-~paliea~~d~---~v~-~G~ 329 (462)
++ +.. +.++.+.++.+++.+|... +... .+. -.+...-+ .++ .-.+++++.|. +.+ .|+
T Consensus 152 i~-~gg--~~~~~~~v~~ll~~~g~~~~dGe~~v~~~---g~~---G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl 222 (480)
T 2zyd_A 152 IM-PGG--QKEAYELVAPILTKIAAVAEDGEPCVTYI---GAD---GAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNL 222 (480)
T ss_dssp EE-EES--CHHHHHHHHHHHHHHSCBCTTSCBSBCCC---BST---THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred EE-ecC--CHHHHHHHHHHHHHHhccccCCCceEEEE---CCc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 33 343 5789999999999999630 1111 010 01111101 111 11245555555 777 599
Q ss_pred CHHHHHHHH
Q 012479 330 NEDLAYKNT 338 (462)
Q Consensus 330 ~~e~A~~~~ 338 (462)
++++.....
T Consensus 223 ~~~~~~~l~ 231 (480)
T 2zyd_A 223 TNEELAQTF 231 (480)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 999887654
No 44
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.41 E-value=2.8e-12 Score=125.03 Aligned_cols=197 Identities=16% Similarity=0.200 Sum_probs=124.8
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecc-hh
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD-AA 190 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd-~a 190 (462)
+||+|||+|.||.+++.+|.+. |++|+++++. .+..+...+.|+.. ..+.+++++++|+||+++|+ ..
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~-~~~~~~~~~~g~~~----~~~~~~~~~~~D~vi~~v~~~~~ 74 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA------GYSLVVSDRN-PEAIADVIAAGAET----ASTAKAIAEQCDVIITMLPNSPH 74 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCEE----CSSHHHHHHHCSEEEECCSSHHH
T ss_pred ceEEEECchHHHHHHHHHHHhC------CCEEEEEeCC-HHHHHHHHHCCCee----cCCHHHHHhCCCEEEEECCCHHH
Confidence 5899999999999999999998 8888766554 44455556668764 56888999999999999995 45
Q ss_pred HHHHH---HHHHhcCCCCcEEEEeccch---HHHhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceEEEe
Q 012479 191 QADNY---EKIFSCMKPNSILGLSHGFL---LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (462)
Q Consensus 191 ~~~vl---~eI~~~Lk~gaiL~~a~G~~---i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~alia 264 (462)
...++ +++.+.+++|++|++.+... ...+.+ .....++.++.. |..++... ... .+... ++
T Consensus 75 ~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~--~~~~~g~~~~~~-pv~~~~~~---~~~------~~~~~-~~ 141 (299)
T 1vpd_A 75 VKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISD--ALKAKGVEMLDA-PVSGGEPK---AID------GTLSV-MV 141 (299)
T ss_dssp HHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHH--HHHTTTCEEEEC-CEESHHHH---HHH------TCEEE-EE
T ss_pred HHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHH--HHHHcCCeEEEe-cCCCCHhH---Hhc------CCEEE-Ee
Confidence 56777 67889999999877665432 223322 111235666654 54333221 112 23444 33
Q ss_pred eccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhH-HhHHH-HHHHHHHHH---HHHcCCCHHHHHHHHH
Q 012479 265 VHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGIL-LGAVH-GIVESLFRR---FTENGMNEDLAYKNTV 339 (462)
Q Consensus 265 v~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL-~G~~p-aliea~~d~---~v~~G~~~e~A~~~~~ 339 (462)
.. +.+..+.+..+++.+|.. ++.+ .+.... ...-| .+... .++.++.|. +.+.|+++++++....
T Consensus 142 -~~--~~~~~~~~~~ll~~~g~~-~~~~---~~~~~~---~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~ 211 (299)
T 1vpd_A 142 -GG--DKAIFDKYYDLMKAMAGS-VVHT---GDIGAG---NVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIR 211 (299)
T ss_dssp -ES--CHHHHHHHHHHHHTTEEE-EEEE---ESTTHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHT
T ss_pred -CC--CHHHHHHHHHHHHHHcCC-eEEe---CCcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 22 678899999999999963 2211 111111 11111 22222 244444454 8899999998887655
Q ss_pred HHH
Q 012479 340 ECI 342 (462)
Q Consensus 340 e~i 342 (462)
++.
T Consensus 212 ~~~ 214 (299)
T 1vpd_A 212 GGL 214 (299)
T ss_dssp TST
T ss_pred ccC
Confidence 543
No 45
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.40 E-value=4.5e-12 Score=126.68 Aligned_cols=187 Identities=15% Similarity=0.043 Sum_probs=118.3
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCC-cEEEEEecCCc------hhHHHHHHcCceecCCCcC-CHhhhhccCCeEE
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGS------RSFAEARAAGFTEENGTLG-DIYETISGSDLVL 183 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G-~~Vivg~r~~~------~s~~~A~~~G~~~~d~~~~-~~~eav~~ADvVi 183 (462)
+||+|||+|+||.++|++|.+. | ++|+++++... ...+.+.+.|+ . . ++.|++++||+||
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~------G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-~-----~~s~~e~~~~aDvVi 92 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR------NAARLAAYDLRFNDPAASGALRARAAELGV-E-----PLDDVAGIACADVVL 92 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT------TCSEEEEECGGGGCTTTHHHHHHHHHHTTC-E-----EESSGGGGGGCSEEE
T ss_pred CeEEEECccHHHHHHHHHHHHc------CCCeEEEEeCCCccccchHHHHHHHHHCCC-C-----CCCHHHHHhcCCEEE
Confidence 7999999999999999999999 9 89888776541 33445555666 2 4 7789999999999
Q ss_pred EeecchhHHHHHHHHHhcCCCCcEEEEeccchHH---HhhhccccCCCCccEEecccC-CCchhhHHhhhcCccccCCCc
Q 012479 184 LLISDAAQADNYEKIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPK-GMGPSVRRLYVQGKEINGAGI 259 (462)
Q Consensus 184 Lavpd~a~~~vl~eI~~~Lk~gaiL~~a~G~~i~---~~~~~~i~~p~~v~VV~v~Pn-gpg~~vr~lf~~G~~~~G~Gv 259 (462)
+++|+....++++++.+.+++|++|++++++... .+.+ .....++.++- +|- +|... .. |-
T Consensus 93 ~avp~~~~~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~--~l~~~g~~~~d-~pv~g~~~a-----~~-------g~ 157 (317)
T 4ezb_A 93 SLVVGAATKAVAASAAPHLSDEAVFIDLNSVGPDTKALAAG--AIATGKGSFVE-GAVMARVPP-----YA-------EK 157 (317)
T ss_dssp ECCCGGGHHHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHH--HHHTSSCEEEE-EEECSCSTT-----TG-------GG
T ss_pred EecCCHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHH--HHHHcCCeEEe-ccCCCCchh-----hc-------CC
Confidence 9999999999999999999999999988876432 2221 11123455543 232 22111 11 23
Q ss_pred eEEEeeccCCCHHHHHHHHHHHHHhCCCcccccch-hhhccccchhhhHhHHhHHHHHHHHHHHHHHHcCCCHH
Q 012479 260 NSSFAVHQDVDGRATNVALGWSVALGSPFTFATTL-EQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNED 332 (462)
Q Consensus 260 ~aliav~qd~tgea~e~a~al~~aiG~~~viettf-~~E~~~dlfgeqtvL~G~~paliea~~d~~v~~G~~~e 332 (462)
..+++...+ + +.++.+++.+|.. ++.+.- ...-..-.+...+.+ ....+++.-++..+.+.|++++
T Consensus 158 l~i~vgg~~----~-~~~~~ll~~~g~~-v~~~g~~~g~a~~~Kl~~N~~~-~~~~~~~~E~~~la~~~Gid~~ 224 (317)
T 4ezb_A 158 VPILVAGRR----A-VEVAERLNALGMN-LEAVGETPGQASSLKMIRSVMI-KGVEALLIEALSSAERAGVTER 224 (317)
T ss_dssp SEEEEESTT----H-HHHHHHHHTTTCE-EEEEESSTTHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHTTCHHH
T ss_pred EEEEEeCCh----H-HHHHHHHHHhCCC-eEEeCCCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCHH
Confidence 333443332 2 7889999999963 332221 001111112223222 2333344444567788999984
No 46
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.39 E-value=2.2e-12 Score=124.78 Aligned_cols=193 Identities=12% Similarity=0.056 Sum_probs=123.0
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecchh
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~a 190 (462)
|+||+|||+|.||.+++.+|.+ |++|+++++...+ .+...+.|+.. .. ..++++++|+||+++|+..
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~-------g~~V~~~~~~~~~-~~~~~~~g~~~----~~-~~~~~~~~D~vi~~v~~~~ 67 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR-------RFPTLVWNRTFEK-ALRHQEEFGSE----AV-PLERVAEARVIFTCLPTTR 67 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT-------TSCEEEECSSTHH-HHHHHHHHCCE----EC-CGGGGGGCSEEEECCSSHH
T ss_pred CCeEEEEcccHHHHHHHHHHhC-------CCeEEEEeCCHHH-HHHHHHCCCcc----cC-HHHHHhCCCEEEEeCCChH
Confidence 4789999999999999999863 5677776665443 44444456653 33 6788899999999999776
Q ss_pred -HHHHHHHHHhcCCCCcEEEEeccch---HHHhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceEEEeec
Q 012479 191 -QADNYEKIFSCMKPNSILGLSHGFL---LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (462)
Q Consensus 191 -~~~vl~eI~~~Lk~gaiL~~a~G~~---i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~aliav~ 266 (462)
..++++++.+.+++|++|++.+... ...+.+ .....++.++.. |..+++. ... .|...+++ .
T Consensus 68 ~~~~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~--~~~~~g~~~~~~-p~~~~~~---~~~-------~g~~~~~~-~ 133 (289)
T 2cvz_A 68 EVYEVAEALYPYLREGTYWVDATSGEPEASRRLAE--RLREKGVTYLDA-PVSGGTS---GAE-------AGTLTVML-G 133 (289)
T ss_dssp HHHHHHHHHTTTCCTTEEEEECSCCCHHHHHHHHH--HHHTTTEEEEEC-CEESHHH---HHH-------HTCEEEEE-E
T ss_pred HHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHH--HHHHcCCEEEEe-cCCCChh---HHh-------hCCeEEEE-C
Confidence 6678888999999999887665443 222222 111235678875 8654443 222 24555444 3
Q ss_pred cCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHH----HHHHHHHH---HHHcCCCHHHHHHHHH
Q 012479 267 QDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG----IVESLFRR---FTENGMNEDLAYKNTV 339 (462)
Q Consensus 267 qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~pa----liea~~d~---~v~~G~~~e~A~~~~~ 339 (462)
. +.+..+.+..++ .+|.. ++... +. +....+..+.++ ++.++.|. +.+.|+++++++....
T Consensus 134 ~--~~~~~~~~~~ll-~~g~~-~~~~~---~~-----~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~ 201 (289)
T 2cvz_A 134 G--PEEAVERVRPFL-AYAKK-VVHVG---PV-----GAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSAEKALEVIN 201 (289)
T ss_dssp S--CHHHHHHHGGGC-TTEEE-EEEEE---ST-----THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHT
T ss_pred C--CHHHHHHHHHHH-hhcCC-eEEcC---CC-----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHHHHHH
Confidence 2 678889999999 99863 22221 11 111222222222 34555555 8899999988877655
Q ss_pred HHH
Q 012479 340 ECI 342 (462)
Q Consensus 340 e~i 342 (462)
++.
T Consensus 202 ~~~ 204 (289)
T 2cvz_A 202 ASS 204 (289)
T ss_dssp TST
T ss_pred ccC
Confidence 443
No 47
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.39 E-value=4.5e-12 Score=125.15 Aligned_cols=156 Identities=13% Similarity=0.083 Sum_probs=103.8
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecC-CchhHHHHHHcCceecC-------CCcC--CHhhhhccCCe
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARAAGFTEEN-------GTLG--DIYETISGSDL 181 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~-~~~s~~~A~~~G~~~~d-------~~~~--~~~eav~~ADv 181 (462)
|||+|||+|+||.++|.+|.++ |++|++.+|. +.+..+...+.|..... .... ++.++++++|+
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~ 74 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDN------GNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEV 74 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH------CCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSE
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCE
Confidence 5899999999999999999999 9988877661 33445555555531000 0123 56788899999
Q ss_pred EEEeecchhHHHHHHHHHhcCCCCcEEEEec-cc------hHHHhhhcc-ccCCC-CccEEecccCCCchhhHHhhhcCc
Q 012479 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSH-GF------LLGHLQSMG-LDFPK-NIGVIAVCPKGMGPSVRRLYVQGK 252 (462)
Q Consensus 182 ViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~-G~------~i~~~~~~~-i~~p~-~v~VV~v~Pngpg~~vr~lf~~G~ 252 (462)
||+++|+....++++++.+ ++++++|++.. |+ ....+.+.. ..++. ..-.++.+|+.+.+.
T Consensus 75 vi~~v~~~~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~--------- 144 (335)
T 1txg_A 75 VLLGVSTDGVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVAITGPAIAREV--------- 144 (335)
T ss_dssp EEECSCGGGHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEEEESSCCHHHH---------
T ss_pred EEEcCChHHHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEEEEECCCcHHHH---------
Confidence 9999999999999999999 99999876654 87 222222200 01111 112556777664332
Q ss_pred cccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCC
Q 012479 253 EINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (462)
Q Consensus 253 ~~~G~Gv~aliav~qd~tgea~e~a~al~~aiG~~ 287 (462)
++|.+..+.+.. .+.+..+.+..++...|..
T Consensus 145 ---~~g~~~~~~~~~-~~~~~~~~~~~ll~~~g~~ 175 (335)
T 1txg_A 145 ---AKRMPTTVVFSS-PSESSANKMKEIFETEYFG 175 (335)
T ss_dssp ---HTTCCEEEEEEC-SCHHHHHHHHHHHCBTTEE
T ss_pred ---HccCCcEEEEEe-CCHHHHHHHHHHhCCCcEE
Confidence 135644344443 3578889999999988853
No 48
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.39 E-value=3.1e-12 Score=135.86 Aligned_cols=148 Identities=17% Similarity=0.054 Sum_probs=105.0
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHH-----cCceecCCCcCCHhhhhcc---CCeEE
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----AGFTEENGTLGDIYETISG---SDLVL 183 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~-----~G~~~~d~~~~~~~eav~~---ADvVi 183 (462)
++|+|||+|+||.++|++|.++ |++|.+++|..++ .+...+ .|+.. ..+++|++++ +|+||
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~------G~~V~v~dr~~~~-~~~l~~~~~~~~gi~~----~~s~~e~v~~l~~aDvVi 79 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH------GFTVCAYNRTQSK-VDHFLANEAKGKSIIG----ATSIEDFISKLKRPRKVM 79 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSHH-HHHHHHTTTTTSSEEC----CSSHHHHHHTSCSSCEEE
T ss_pred CCEEEEeeHHHHHHHHHHHHHC------CCEEEEEeCCHHH-HHHHHcccccCCCeEE----eCCHHHHHhcCCCCCEEE
Confidence 7899999999999999999999 9999888776554 444444 47764 5688898887 99999
Q ss_pred Eeecc-hhHHHHHHHHHhcCCCCcEEEEeccchH---HHhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCc
Q 012479 184 LLISD-AAQADNYEKIFSCMKPNSILGLSHGFLL---GHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGI 259 (462)
Q Consensus 184 Lavpd-~a~~~vl~eI~~~Lk~gaiL~~a~G~~i---~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv 259 (462)
++||+ +...++++++.+++++|++|++++.... ..+.+ .....++.++ .+|...+.. ... .|.
T Consensus 80 l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~--~l~~~g~~~v-~~pVsgg~~---~a~-------~G~ 146 (497)
T 2p4q_A 80 LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYE--ELKKKGILFV-GSGVSGGEE---GAR-------YGP 146 (497)
T ss_dssp ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHH--HHHHTTCEEE-EEEEESHHH---HHH-------HCC
T ss_pred EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHH--HHHHcCCcee-CCCcccChh---Hhh-------cCC
Confidence 99999 4778899999999999999887764421 22222 1112356676 346332222 112 345
Q ss_pred eEEEeeccCCCHHHHHHHHHHHHHhCCC
Q 012479 260 NSSFAVHQDVDGRATNVALGWSVALGSP 287 (462)
Q Consensus 260 ~aliav~qd~tgea~e~a~al~~aiG~~ 287 (462)
.++ +.. +.++.+.++.+++.+|..
T Consensus 147 -~im-~gg--~~e~~~~v~~ll~~~g~~ 170 (497)
T 2p4q_A 147 -SLM-PGG--SEEAWPHIKNIFQSISAK 170 (497)
T ss_dssp -EEE-EEE--CGGGHHHHHHHHHHHSCE
T ss_pred -eEE-ecC--CHHHHHHHHHHHHHhcCc
Confidence 323 343 578899999999999963
No 49
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=99.38 E-value=4.1e-13 Score=143.48 Aligned_cols=168 Identities=17% Similarity=0.115 Sum_probs=123.2
Q ss_pred eeecCcccccc-cccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCC
Q 012479 93 IVRGGRDLFNL-LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD 171 (462)
Q Consensus 93 ~~~~~~~~f~~-~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~ 171 (462)
-+|.|+|.... ....+.| ++|+|||+|+||.++|++|+.. |++|+++++.. +.+.+.+.|+.. .+
T Consensus 124 ~~~~g~w~~~~~~~~~l~g-~~vgIIG~G~IG~~vA~~l~~~------G~~V~~~d~~~--~~~~a~~~g~~~-----~~ 189 (529)
T 1ygy_A 124 SLREHTWKRSSFSGTEIFG-KTVGVVGLGRIGQLVAQRIAAF------GAYVVAYDPYV--SPARAAQLGIEL-----LS 189 (529)
T ss_dssp HHHTTCCCGGGCCBCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECTTS--CHHHHHHHTCEE-----CC
T ss_pred HHHhCCCcccCcCccccCC-CEEEEEeeCHHHHHHHHHHHhC------CCEEEEECCCC--ChhHHHhcCcEE-----cC
Confidence 45778996532 2367999 9999999999999999999988 98887665543 345577788874 48
Q ss_pred HhhhhccCCeEEEeecch-hHHHHHHH-HHhcCCCCcEEEEeccch-HH------HhhhccccCCCCccEEecccCCCch
Q 012479 172 IYETISGSDLVLLLISDA-AQADNYEK-IFSCMKPNSILGLSHGFL-LG------HLQSMGLDFPKNIGVIAVCPKGMGP 242 (462)
Q Consensus 172 ~~eav~~ADvViLavpd~-a~~~vl~e-I~~~Lk~gaiL~~a~G~~-i~------~~~~~~i~~p~~v~VV~v~Pngpg~ 242 (462)
.++++++||+|++++|+. ....++.+ +.+.||+|++|++++-.. +. .+.+..+ -...++|+..||. +.
T Consensus 190 l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i-~ga~lDv~~~eP~-~~- 266 (529)
T 1ygy_A 190 LDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHV-RAAGLDVFATEPC-TD- 266 (529)
T ss_dssp HHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSE-EEEEESSCSSSSC-SC-
T ss_pred HHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCc-cEEEEeeccCCCC-CC-
Confidence 899999999999999988 66777764 889999999988765321 11 1111000 0124678999995 32
Q ss_pred hhHHhhhcCccccCCCceEEEeeccC-CCHHHHHH-----HHHHHHHhCCC
Q 012479 243 SVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNV-----ALGWSVALGSP 287 (462)
Q Consensus 243 ~vr~lf~~G~~~~G~Gv~aliav~qd-~tgea~e~-----a~al~~aiG~~ 287 (462)
..+|. +-+++++||.. .+.++.+. +..++..++..
T Consensus 267 --~~L~~--------~~~vilTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~ 307 (529)
T 1ygy_A 267 --SPLFE--------LAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGE 307 (529)
T ss_dssp --CGGGG--------CTTEEECSSCSSCBHHHHHHHHHHHHHHHHHHHTTC
T ss_pred --chHHh--------CCCEEEccccCCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 24565 47889999998 78888775 77888888864
No 50
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.38 E-value=5e-12 Score=127.43 Aligned_cols=149 Identities=17% Similarity=0.136 Sum_probs=102.6
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcC--------------ceecCCCcCCHhhhhc
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG--------------FTEENGTLGDIYETIS 177 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G--------------~~~~d~~~~~~~eav~ 177 (462)
+||+|||+|+||.++|.+|.++ |++|.+++|..+ ..+...+.| +.. ..++.++++
T Consensus 16 ~kI~iIG~G~mG~~la~~L~~~------G~~V~~~~r~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 84 (366)
T 1evy_A 16 NKAVVFGSGAFGTALAMVLSKK------CREVCVWHMNEE-EVRLVNEKRENVLFLKGVQLASNITF----TSDVEKAYN 84 (366)
T ss_dssp EEEEEECCSHHHHHHHHHHTTT------EEEEEEECSCHH-HHHHHHHHTBCTTTSTTCBCCTTEEE----ESCHHHHHT
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCEEEEEECCHH-HHHHHHHcCcccccccccccccceee----eCCHHHHHc
Confidence 4999999999999999999988 888887766533 344444333 221 357788899
Q ss_pred cCCeEEEeecchhHHHHHHH----HHhcCCC-CcEEEEec-cchHHHh---hhc-cccCCCCccEEecccCCCchhhHHh
Q 012479 178 GSDLVLLLISDAAQADNYEK----IFSCMKP-NSILGLSH-GFLLGHL---QSM-GLDFPKNIGVIAVCPKGMGPSVRRL 247 (462)
Q Consensus 178 ~ADvViLavpd~a~~~vl~e----I~~~Lk~-gaiL~~a~-G~~i~~~---~~~-~i~~p~~v~VV~v~Pngpg~~vr~l 247 (462)
++|+||+++|+....+++++ |.+++++ +++|+++. |+..... .+. ...+|.....++.+|+.+...
T Consensus 85 ~aDvVilav~~~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~~~~v~~gp~~~~~~---- 160 (366)
T 1evy_A 85 GAEIILFVIPTQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAGPSFAIEV---- 160 (366)
T ss_dssp TCSSEEECCCHHHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEEEEESSCCHHHH----
T ss_pred CCCEEEECCChHHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCCcEEEEeCCChHHHH----
Confidence 99999999999988999998 9999988 88766554 7744211 000 002232223567788775433
Q ss_pred hhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHh
Q 012479 248 YVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVAL 284 (462)
Q Consensus 248 f~~G~~~~G~Gv~aliav~qd~tgea~e~a~al~~ai 284 (462)
+ .|.+.++.+. ..+.+..+.+..++...
T Consensus 161 ~--------~g~~~~~~~~-~~~~~~~~~v~~ll~~~ 188 (366)
T 1evy_A 161 A--------TGVFTCVSIA-SADINVARRLQRIMSTG 188 (366)
T ss_dssp H--------TTCCEEEEEE-CSSHHHHHHHHHHHSCT
T ss_pred H--------hCCceEEEEe-cCCHHHHHHHHHHhcCC
Confidence 1 3555544433 34678889999999988
No 51
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.38 E-value=3.4e-12 Score=127.50 Aligned_cols=185 Identities=13% Similarity=0.052 Sum_probs=117.1
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcC-----------ceecCCCcCCHhhhhccCC
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-----------FTEENGTLGDIYETISGSD 180 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G-----------~~~~d~~~~~~~eav~~AD 180 (462)
+||+|||+|+||.++|.+|.++ |++|.++.|..++ .+...+.| +.. ..++++ ++++|
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~------G~~V~~~~r~~~~-~~~l~~~g~~~~~~~~~~~~~~----~~~~~~-~~~aD 82 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHEN------GEEVILWARRKEI-VDLINVSHTSPYVEESKITVRA----TNDLEE-IKKED 82 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSHHH-HHHHHHHSCBTTBTTCCCCSEE----ESCGGG-CCTTE
T ss_pred CcEEEECcCHHHHHHHHHHHhC------CCeEEEEeCCHHH-HHHHHHhCCcccCCCCeeeEEE----eCCHHH-hcCCC
Confidence 7999999999999999999999 9999887776443 33334445 232 456778 88999
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEe-ccchHHHh---hhc-cccCCCCccEEecccCCCchhhHHhhhcCcccc
Q 012479 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS-HGFLLGHL---QSM-GLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEIN 255 (462)
Q Consensus 181 vViLavpd~a~~~vl~eI~~~Lk~gaiL~~a-~G~~i~~~---~~~-~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~ 255 (462)
+||++||+++..++++++.+ ++++|+.+ .|+..... .+. ...++ ....++.+|+.+...
T Consensus 83 vVil~vk~~~~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~-~~~~~~~~P~~~~~~------------ 146 (335)
T 1z82_A 83 ILVIAIPVQYIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILG-CPYAVLSGPSHAEEV------------ 146 (335)
T ss_dssp EEEECSCGGGHHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTC-CCEEEEESSCCHHHH------------
T ss_pred EEEEECCHHHHHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcC-CceEEEECCccHHHH------------
Confidence 99999999988899988766 77766544 47643211 000 00123 224678999887654
Q ss_pred CCCceEEEeeccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhh-------------hHh----------HHhH
Q 012479 256 GAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGE-------------RGI----------LLGA 312 (462)
Q Consensus 256 G~Gv~aliav~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfge-------------qtv----------L~G~ 312 (462)
+.|.+..+....+ + .+.+..++...|.. +. ...|+.+. .++ +...
T Consensus 147 ~~g~~~~~~~g~~-~---~~~~~~ll~~~g~~-~~-------~~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~a~ 214 (335)
T 1z82_A 147 AKKLPTAVTLAGE-N---SKELQKRISTEYFR-VY-------TCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAAL 214 (335)
T ss_dssp HTTCCEEEEEEET-T---HHHHHHHHCCSSEE-EE-------EESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred hCCCceEEEEEeh-h---HHHHHHHhCCCCEE-EE-------ecCchHHHHHHHHHHhHHHHHHHHHhcCCCCchhHHHH
Confidence 2455433333332 1 66778888887753 11 11222211 011 1122
Q ss_pred HHHHHHHHHHHHHHcCCCHHHHHH
Q 012479 313 VHGIVESLFRRFTENGMNEDLAYK 336 (462)
Q Consensus 313 ~paliea~~d~~v~~G~~~e~A~~ 336 (462)
...++..+.+.+.+.|++++..+.
T Consensus 215 ~~~~~~E~~~la~a~G~~~~~~~~ 238 (335)
T 1z82_A 215 ETRGIYEIARFGMFFGADQKTFMG 238 (335)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHTS
T ss_pred HHHHHHHHHHHHHHhCCChhhhcc
Confidence 334667777788889999876544
No 52
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.37 E-value=9.3e-12 Score=124.15 Aligned_cols=191 Identities=17% Similarity=0.083 Sum_probs=124.3
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecch-h
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA-A 190 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~-a 190 (462)
+||+|||+|.||.++|++|.+. |++|++++|. ....+...+.|+.. ..+.+|++++||+||+++|+. .
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~-~~~~~~l~~~g~~~----~~~~~e~~~~aDvVi~~vp~~~~ 100 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEA------GYALQVWNRT-PARAASLAALGATI----HEQARAAARDADIVVSMLENGAV 100 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHTTTCEE----ESSHHHHHTTCSEEEECCSSHHH
T ss_pred CEEEEECccHHHHHHHHHHHhC------CCeEEEEcCC-HHHHHHHHHCCCEe----eCCHHHHHhcCCEEEEECCCHHH
Confidence 8999999999999999999999 9998877665 44455666668775 578999999999999999964 5
Q ss_pred HHHHHH--HHHhcCCCCcEEEEeccchHH---HhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceEEEee
Q 012479 191 QADNYE--KIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (462)
Q Consensus 191 ~~~vl~--eI~~~Lk~gaiL~~a~G~~i~---~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~aliav 265 (462)
..+++. ++.+.+++|++|++++..... .+.+ .....++.++. +|...+.. .-. .|...+++
T Consensus 101 ~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~--~~~~~g~~~~~-~pv~g~~~---~a~-------~g~l~i~~- 166 (320)
T 4dll_A 101 VQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAA--RLGALGIAHLD-TPVSGGTV---GAE-------QGTLVIMA- 166 (320)
T ss_dssp HHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHH--HHHHTTCEEEE-CCEECHHH---HHH-------HTCEEEEE-
T ss_pred HHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHH--HHHHcCCEEEe-CCCcCCHh---HHh-------cCCeeEEe-
Confidence 567777 788999999999888776432 1111 11123566665 36432222 111 23434333
Q ss_pred ccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhH-HhHH----HHHHHHHHHHHHHcCCCHHHHHHH
Q 012479 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGIL-LGAV----HGIVESLFRRFTENGMNEDLAYKN 337 (462)
Q Consensus 266 ~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL-~G~~----paliea~~d~~v~~G~~~e~A~~~ 337 (462)
.. +.++.+.++.+++.+ . .++... +. --++..-+ .+.. -+++.-++..+.+.|++++..+..
T Consensus 167 gg--~~~~~~~~~~ll~~~-~-~~~~~g---~~---g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~ 233 (320)
T 4dll_A 167 GG--KPADFERSLPLLKVF-G-RATHVG---PH---GSGQLTKLANQMIVGITIGAVAEALLFATKGGADMAKVKEA 233 (320)
T ss_dssp ES--CHHHHHHHHHHHHHH-E-EEEEEE---ST---THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred CC--CHHHHHHHHHHHHhc-C-CEEEeC---Cc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 33 578999999999999 4 333221 11 01111111 2222 223344445567899999877663
No 53
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.36 E-value=7.9e-12 Score=119.97 Aligned_cols=184 Identities=16% Similarity=0.117 Sum_probs=112.8
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecC-CchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecchh
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~-~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~a 190 (462)
|||+|||+|+||.++|.+|.+. |++|++.++. ..+..+...+.|+. .+.+++++++|+||+++|+..
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~------g~~V~~~~~~~~~~~~~~~~~~g~~------~~~~~~~~~aDvvi~~v~~~~ 68 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSR------GVEVVTSLEGRSPSTIERARTVGVT------ETSEEDVYSCPVVISAVTPGV 68 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT------TCEEEECCTTCCHHHHHHHHHHTCE------ECCHHHHHTSSEEEECSCGGG
T ss_pred CeEEEEechHHHHHHHHHHHHC------CCeEEEeCCccCHHHHHHHHHCCCc------CCHHHHHhcCCEEEEECCCHH
Confidence 5899999999999999999998 9888775432 33344555555664 366788999999999999998
Q ss_pred HHHHHHHHHhcCCCCcEEEEeccchH---HHhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceEEEeecc
Q 012479 191 QADNYEKIFSCMKPNSILGLSHGFLL---GHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ 267 (462)
Q Consensus 191 ~~~vl~eI~~~Lk~gaiL~~a~G~~i---~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~aliav~q 267 (462)
+.+.+.++.+.+++ +|++.++... ..+.+ .+++.- ++. +|...++. ... .|.+ +++..+
T Consensus 69 ~~~~~~~~~~~~~~--~vi~~s~~~~~~~~~l~~---~~~~~g-~~~-~~v~~~~~---~~~-------~g~~-~~~~g~ 130 (264)
T 1i36_A 69 ALGAARRAGRHVRG--IYVDINNISPETVRMASS---LIEKGG-FVD-AAIMGSVR---RKG-------ADIR-IIASGR 130 (264)
T ss_dssp HHHHHHHHHTTCCS--EEEECSCCCHHHHHHHHH---HCSSSE-EEE-EEECSCHH---HHG-------GGCE-EEEEST
T ss_pred HHHHHHHHHHhcCc--EEEEccCCCHHHHHHHHH---HHhhCC-eee-eeeeCCcc---ccc-------cCCe-EEecCC
Confidence 87777888888877 7777776642 23333 233321 332 34221111 111 3566 444333
Q ss_pred CCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHH----HHHHHHHHH---HHHcCCCHHHHHHHHHH
Q 012479 268 DVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVH----GIVESLFRR---FTENGMNEDLAYKNTVE 340 (462)
Q Consensus 268 d~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~p----aliea~~d~---~v~~G~~~e~A~~~~~e 340 (462)
+ . +.+.. ++.+|.. ++.+ .+. .+....+..+.+ .++.++.|. +++.|++++ ++....+
T Consensus 131 ~--~---~~~~~-l~~~g~~-~~~~---~~~----~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~~~G~~~~-~~~~~~~ 195 (264)
T 1i36_A 131 D--A---EEFMK-LNRYGLN-IEVR---GRE----PGDASAIKMLRSSYTKGVSALLWETLTAAHRLGLEED-VLEMLEY 195 (264)
T ss_dssp T--H---HHHHG-GGGGTCE-EEEC---SSS----TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHT
T ss_pred c--H---HHhhh-HHHcCCe-eEEC---CCC----cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHH
Confidence 2 1 66777 8999863 2222 111 223333222222 234555555 899999986 6654444
No 54
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.36 E-value=2.1e-11 Score=124.26 Aligned_cols=152 Identities=14% Similarity=0.169 Sum_probs=105.2
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceec---C-------CCcCCHhhhhccCCe
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE---N-------GTLGDIYETISGSDL 181 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~---d-------~~~~~~~eav~~ADv 181 (462)
+||+|||.|+||.++|..|.++ |++|.++.|.. +..+...+.|.... + ....++++++++||+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~------G~~V~l~~r~~-~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDv 102 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK------GQKVRLWSYES-DHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTD 102 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT------TCCEEEECSCH-HHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCE
T ss_pred CeEEEECccHHHHHHHHHHHHC------CCeEEEEeCCH-HHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCE
Confidence 7999999999999999999999 99988777653 33444444442100 0 013578889999999
Q ss_pred EEEeecchhHHHHHHHHHhcCCCCcEE-EEeccchHH------HhhhccccCCCCccEEecccCCCchhhHHhhhcCccc
Q 012479 182 VLLLISDAAQADNYEKIFSCMKPNSIL-GLSHGFLLG------HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEI 254 (462)
Q Consensus 182 ViLavpd~a~~~vl~eI~~~Lk~gaiL-~~a~G~~i~------~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~ 254 (462)
||+++|++...+++++|.++++++++| +.+.|+... .+.+ .+|...-.+...|+.....
T Consensus 103 VilaVp~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~---~l~~~~~~vlsgP~~a~ev----------- 168 (356)
T 3k96_A 103 ILIVVPSFAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVAT---ELGQVPMAVISGPSLATEV----------- 168 (356)
T ss_dssp EEECCCHHHHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHH---HHCSCCEEEEESSCCHHHH-----------
T ss_pred EEECCCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHH---HcCCCCEEEEECccHHHHH-----------
Confidence 999999999999999999999999865 456677542 2322 2232223466677654332
Q ss_pred cCCCceEEEeeccCCCHHHHHHHHHHHHHhCC
Q 012479 255 NGAGINSSFAVHQDVDGRATNVALGWSVALGS 286 (462)
Q Consensus 255 ~G~Gv~aliav~qd~tgea~e~a~al~~aiG~ 286 (462)
++|.+..+++.. .+.+..+.+..++...|.
T Consensus 169 -~~g~pt~~via~-~~~~~~~~v~~lf~~~~~ 198 (356)
T 3k96_A 169 -AANLPTAVSLAS-NNSQFSKDLIERLHGQRF 198 (356)
T ss_dssp -HTTCCEEEEEEE-SCHHHHHHHHHHHCCSSE
T ss_pred -HcCCCeEEEEec-CCHHHHHHHHHHhCCCCe
Confidence 145666454443 356777888888887775
No 55
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.36 E-value=1.1e-11 Score=121.00 Aligned_cols=196 Identities=15% Similarity=0.113 Sum_probs=123.4
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecchh-
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA- 190 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~a- 190 (462)
+||+|||+|.||.+++.+|.+. |++|+++++. .+..+...+.|+.. ..+.+++++++|+||+++|+..
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~-~~~~~~~~~~g~~~----~~~~~~~~~~~D~vi~~vp~~~~ 73 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE------GVTVYAFDLM-EANVAAVVAQGAQA----CENNQKVAAASDIIFTSLPNAGI 73 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT------TCEEEEECSS-HHHHHHHHTTTCEE----CSSHHHHHHHCSEEEECCSSHHH
T ss_pred CEEEEECccHHHHHHHHHHHHC------CCeEEEEeCC-HHHHHHHHHCCCee----cCCHHHHHhCCCEEEEECCCHHH
Confidence 7899999999999999999998 8888766554 33445555557764 5688899999999999998554
Q ss_pred HHHHHH---HHHhcCCCCcEEEEe-ccc--hHHHhhhccccCC-CCccEEecccCCCchhhHHhhhcCccccCCCceEEE
Q 012479 191 QADNYE---KIFSCMKPNSILGLS-HGF--LLGHLQSMGLDFP-KNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSF 263 (462)
Q Consensus 191 ~~~vl~---eI~~~Lk~gaiL~~a-~G~--~i~~~~~~~i~~p-~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~ali 263 (462)
...++. ++.+.+++|++|++. .|. ....+.+ .++ .++.++. +|..++.. ... .|...++
T Consensus 74 ~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~---~~~~~g~~~~~-~p~~~~~~---~a~-------~g~~~~~ 139 (301)
T 3cky_A 74 VETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAK---VAAEKGIDYVD-APVSGGTK---GAE-------AGTLTIM 139 (301)
T ss_dssp HHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHH---HHHHTTCEEEE-CCEESHHH---HHH-------HTCEEEE
T ss_pred HHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHH---HHHHcCCeEEE-ccCCCCHH---HHH-------cCCeEEE
Confidence 567775 788999999987654 444 2333332 122 3566664 57554432 222 2454444
Q ss_pred eeccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHh-HHhHHHH-HHHHHHH---HHHHcCCCHHHHHHHH
Q 012479 264 AVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGI-LLGAVHG-IVESLFR---RFTENGMNEDLAYKNT 338 (462)
Q Consensus 264 av~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtv-L~G~~pa-liea~~d---~~v~~G~~~e~A~~~~ 338 (462)
+ .. +.+..+.+..+++.+|.. ++... +... +...- +.+...+ ++.++.| .+.+.|+++++++...
T Consensus 140 ~-~g--~~~~~~~v~~ll~~~g~~-~~~~~---~~g~---~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 209 (301)
T 3cky_A 140 V-GA--SEAVFEKIQPVLSVIGKD-IYHVG---DTGA---GDAVKIVNNLLLGCNMASLAEALVLGVKCGLKPETMQEII 209 (301)
T ss_dssp E-ES--CHHHHHHHHHHHHHHEEE-EEEEE---STTH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred E-CC--CHHHHHHHHHHHHHhcCC-EEEeC---CCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 4 33 678899999999999964 11111 1111 01100 1122211 2223333 3889999998877655
Q ss_pred HHHH
Q 012479 339 VECI 342 (462)
Q Consensus 339 ~e~i 342 (462)
.++.
T Consensus 210 ~~~~ 213 (301)
T 3cky_A 210 GKSS 213 (301)
T ss_dssp HTST
T ss_pred HcCC
Confidence 4443
No 56
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.36 E-value=3.4e-11 Score=120.28 Aligned_cols=148 Identities=9% Similarity=0.028 Sum_probs=103.7
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCC-------cEEEEEecCCch----hHHHHHHcC--------------ceecC
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-------IVVKVGLRKGSR----SFAEARAAG--------------FTEEN 166 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G-------~~Vivg~r~~~~----s~~~A~~~G--------------~~~~d 166 (462)
+||+|||+|+||.++|.+|.++ | ++|.+++|.... ..+...+.+ +..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~------g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-- 80 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGN------AAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVA-- 80 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH------HHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEE--
T ss_pred CeEEEECCCHHHHHHHHHHHhc------CCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEE--
Confidence 6999999999999999999998 8 788877765440 233333221 221
Q ss_pred CCcCCHhhhhccCCeEEEeecchhHHHHHHHHHhcCCCCcEEE-EeccchH--------H-HhhhccccCCCCccEEecc
Q 012479 167 GTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILG-LSHGFLL--------G-HLQSMGLDFPKNIGVIAVC 236 (462)
Q Consensus 167 ~~~~~~~eav~~ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~-~a~G~~i--------~-~~~~~~i~~p~~v~VV~v~ 236 (462)
..+++++++++|+||+++|++...+++++|.++++++++|+ .+.|+.+ . .+.+ .++.+ ..++.+
T Consensus 81 --~~~~~~~~~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~---~~~~~-~~v~~g 154 (354)
T 1x0v_A 81 --VPDVVQAAEDADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGE---RLGIP-MSVLMG 154 (354)
T ss_dssp --ESSHHHHHTTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHH---HHTCC-EEEEEC
T ss_pred --EcCHHHHHcCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHH---HcCCC-EEEEEC
Confidence 35678889999999999999999999999999999998765 4456642 1 1111 12311 357788
Q ss_pred cCCCchhhHHhhhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCC
Q 012479 237 PKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGS 286 (462)
Q Consensus 237 Pngpg~~vr~lf~~G~~~~G~Gv~aliav~qd~tgea~e~a~al~~aiG~ 286 (462)
|+.+... + .|.+..+.+. ..+.+..+.+..++...|.
T Consensus 155 p~~a~~v----~--------~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~ 191 (354)
T 1x0v_A 155 ANIASEV----A--------DEKFCETTIG-CKDPAQGQLLKELMQTPNF 191 (354)
T ss_dssp SCCHHHH----H--------TTCCEEEEEE-CSSHHHHHHHHHHHCBTTE
T ss_pred CCcHHHH----H--------hcCCceEEEE-ECCHHHHHHHHHHhCCCCE
Confidence 8876543 1 3565444443 3457888889999998885
No 57
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.35 E-value=2.5e-11 Score=127.81 Aligned_cols=149 Identities=13% Similarity=0.094 Sum_probs=104.8
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHc---CceecCCCcCCHhhhhcc---CCeEEEe
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA---GFTEENGTLGDIYETISG---SDLVLLL 185 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~---G~~~~d~~~~~~~eav~~---ADvViLa 185 (462)
++|+|||+|+||.++|++|.+. |++|.+++|..++..+...+. |+.. ..+++|++++ +|+||++
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~------G~~V~v~dr~~~~~~~l~~~~~~~gi~~----~~s~~e~v~~l~~aDvVila 75 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESR------GYTVAIYNRTTSKTEEVFKEHQDKNLVF----TKTLEEFVGSLEKPRRIMLM 75 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSHHHHHHHHHHTTTSCEEE----CSSHHHHHHTBCSSCEEEEC
T ss_pred CcEEEEeeHHHHHHHHHHHHhC------CCEEEEEcCCHHHHHHHHHhCcCCCeEE----eCCHHHHHhhccCCCEEEEE
Confidence 6899999999999999999998 998887776644433333333 6664 5688898876 9999999
Q ss_pred ecch-hHHHHHHHHHhcCCCCcEEEEec-cch--HHHhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceE
Q 012479 186 ISDA-AQADNYEKIFSCMKPNSILGLSH-GFL--LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINS 261 (462)
Q Consensus 186 vpd~-a~~~vl~eI~~~Lk~gaiL~~a~-G~~--i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~a 261 (462)
||+. ...++++++.+++++|++|++.+ |.. ...+.+ .....++.++ .+|...+... -. .|...
T Consensus 76 vp~~~~v~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~--~l~~~g~~~v-~~pv~gg~~~---a~-------~g~~i 142 (474)
T 2iz1_A 76 VQAGAATDATIKSLLPLLDIGDILIDGGNTHFPDTMRRNA--ELADSGINFI-GTGVSGGEKG---AL-------LGPSM 142 (474)
T ss_dssp CCTTHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHH--HTTTSSCEEE-EEEECSHHHH---HH-------HCCCE
T ss_pred ccCchHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHH--HHHHCCCeEE-CCCCCCChhh---hc-------cCCeE
Confidence 9995 66789999999999999887665 432 222322 1212356666 4576443321 12 24432
Q ss_pred EEeeccCCCHHHHHHHHHHHHHhCCC
Q 012479 262 SFAVHQDVDGRATNVALGWSVALGSP 287 (462)
Q Consensus 262 liav~qd~tgea~e~a~al~~aiG~~ 287 (462)
+ +.. +.++.+.+..+++.+|..
T Consensus 143 -~-~gg--~~~~~~~v~~ll~~~g~~ 164 (474)
T 2iz1_A 143 -M-PGG--QKEAYDLVAPIFEQIAAK 164 (474)
T ss_dssp -E-EEE--CHHHHHHHHHHHHHHSCB
T ss_pred -E-ecC--CHHHHHHHHHHHHHHhcc
Confidence 3 333 678999999999999964
No 58
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.35 E-value=3.3e-11 Score=122.28 Aligned_cols=149 Identities=11% Similarity=0.005 Sum_probs=103.4
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCC-------cEEEEEecCCc----hhHHHHHHc--------------Cceec
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSD-------IVVKVGLRKGS----RSFAEARAA--------------GFTEE 165 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G-------~~Vivg~r~~~----~s~~~A~~~--------------G~~~~ 165 (462)
++||+|||+|+||.++|.+|.++ | ++|+++.|... +..+...+. ++..
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~------G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~- 93 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTN------AKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVA- 93 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHH------HHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEE-
T ss_pred CCEEEEECcCHHHHHHHHHHHHc------CCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEE-
Confidence 36899999999999999999988 7 78888777544 023332222 2222
Q ss_pred CCCcCCHhhhhccCCeEEEeecchhHHHHHHHHHh----cCCCCcEEEEec-cchHH---------HhhhccccCCCCcc
Q 012479 166 NGTLGDIYETISGSDLVLLLISDAAQADNYEKIFS----CMKPNSILGLSH-GFLLG---------HLQSMGLDFPKNIG 231 (462)
Q Consensus 166 d~~~~~~~eav~~ADvViLavpd~a~~~vl~eI~~----~Lk~gaiL~~a~-G~~i~---------~~~~~~i~~p~~v~ 231 (462)
+.++.++++++|+||++||++...+++++|.+ +++++++|+.+. |+... .+.+ .++.+ -
T Consensus 94 ---~~~~~ea~~~aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~---~~~~~-~ 166 (375)
T 1yj8_A 94 ---HSDLASVINDADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISD---FLNIP-C 166 (375)
T ss_dssp ---ESSTHHHHTTCSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHH---HSSSC-E
T ss_pred ---ECCHHHHHcCCCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHH---HcCCC-E
Confidence 35677889999999999999999999999999 999999765444 76431 1111 12322 3
Q ss_pred EEecccCCCchhhHHhhhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCC
Q 012479 232 VIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGS 286 (462)
Q Consensus 232 VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~aliav~qd~tgea~e~a~al~~aiG~ 286 (462)
.++.+|+.+... +.|.+..+.+.. .+.+..+.+..++...|.
T Consensus 167 ~v~~gp~~a~~v------------~~g~~~~~~~~~-~~~~~~~~v~~ll~~~g~ 208 (375)
T 1yj8_A 167 SALSGANIAMDV------------AMENFSEATIGG-NDKDSLVIWQRVFDLPYF 208 (375)
T ss_dssp EEEECSCCHHHH------------HTTCCEEEEEEC-SCHHHHHHHHHHHCBTTE
T ss_pred EEEeCCchHHHH------------HhCCCeEEEEec-CCHHHHHHHHHHhCCCCe
Confidence 567788775433 135665444333 467788889999998885
No 59
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.35 E-value=1.9e-11 Score=124.80 Aligned_cols=153 Identities=16% Similarity=0.091 Sum_probs=108.8
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccC---Ce
Q 012479 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGS---DL 181 (462)
Q Consensus 105 ~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~A---Dv 181 (462)
+..+++ +||+|||+|+||.++|++|.+. |++|++++|. ....+.+.+.|+.. ..+++|+++++ |+
T Consensus 17 ~~Mm~~-mkIgiIGlG~mG~~~A~~L~~~------G~~V~v~dr~-~~~~~~l~~~g~~~----~~s~~e~~~~a~~~Dv 84 (358)
T 4e21_A 17 NLYFQS-MQIGMIGLGRMGADMVRRLRKG------GHECVVYDLN-VNAVQALEREGIAG----ARSIEEFCAKLVKPRV 84 (358)
T ss_dssp -----C-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHTTTCBC----CSSHHHHHHHSCSSCE
T ss_pred hhhhcC-CEEEEECchHHHHHHHHHHHhC------CCEEEEEeCC-HHHHHHHHHCCCEE----eCCHHHHHhcCCCCCE
Confidence 344566 8999999999999999999999 9998877665 44456666678774 57899999999 99
Q ss_pred EEEeecchhHHHHHHHHHhcCCCCcEEEEeccchH---HHhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCC
Q 012479 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSHGFLL---GHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAG 258 (462)
Q Consensus 182 ViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~G~~i---~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~G 258 (462)
||+++|+....++++++.+.+++|++|++.+.... ..+.+ .....++.++. +|-.-+.. .-. .|
T Consensus 85 Vi~~vp~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~--~l~~~g~~~vd-apVsGg~~---~a~-------~G 151 (358)
T 4e21_A 85 VWLMVPAAVVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRAD--QMRAQGITYVD-VGTSGGIF---GLE-------RG 151 (358)
T ss_dssp EEECSCGGGHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHH--HHHTTTCEEEE-EEEECGGG---HHH-------HC
T ss_pred EEEeCCHHHHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHH--HHHHCCCEEEe-CCCCCCHH---HHh-------cC
Confidence 99999999778899999999999999998876542 11111 12234666765 35322221 111 24
Q ss_pred ceEEEeeccCCCHHHHHHHHHHHHHhCC
Q 012479 259 INSSFAVHQDVDGRATNVALGWSVALGS 286 (462)
Q Consensus 259 v~aliav~qd~tgea~e~a~al~~aiG~ 286 (462)
. + +.+.. +.++++.++.+++.+|.
T Consensus 152 ~-~-im~GG--~~~a~~~~~~ll~~lg~ 175 (358)
T 4e21_A 152 Y-C-LMIGG--EKQAVERLDPVFRTLAP 175 (358)
T ss_dssp C-E-EEEES--CHHHHHHTHHHHHHHSC
T ss_pred C-e-eeecC--CHHHHHHHHHHHHHhcc
Confidence 4 4 33444 57899999999999994
No 60
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.34 E-value=9.6e-12 Score=120.86 Aligned_cols=195 Identities=11% Similarity=0.064 Sum_probs=122.7
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecchh
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~a 190 (462)
++||+|||+|.||.++|.+|.+. |++|++++ + ....+...+.|+.. ..+.+++++++|+||+++|+..
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~-~-~~~~~~~~~~g~~~----~~~~~~~~~~~D~vi~~vp~~~ 70 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARA------GHQLHVTT-I-GPVADELLSLGAVN----VETARQVTEFADIIFIMVPDTP 70 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHT------TCEEEECC-S-SCCCHHHHTTTCBC----CSSHHHHHHTCSEEEECCSSHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhC------CCEEEEEc-C-HHHHHHHHHcCCcc----cCCHHHHHhcCCEEEEECCCHH
Confidence 47999999999999999999998 88887665 4 33344455557764 5678899999999999998776
Q ss_pred -HHHHHH---HHHhcCCCCcEEEEeccch---HHHhhhccccCC-CCccEEecccCCCchhhHHhhhcCccccCCCceEE
Q 012479 191 -QADNYE---KIFSCMKPNSILGLSHGFL---LGHLQSMGLDFP-KNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSS 262 (462)
Q Consensus 191 -~~~vl~---eI~~~Lk~gaiL~~a~G~~---i~~~~~~~i~~p-~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~al 262 (462)
...++. ++.+.+++|++|++.+... ...+.+ .++ .++.++. +|...+.. ... .|...+
T Consensus 71 ~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~---~~~~~g~~~~~-~p~~~~~~---~a~-------~g~~~~ 136 (295)
T 1yb4_A 71 QVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQ---RVNEMGADYLD-APVSGGEI---GAR-------EGTLSI 136 (295)
T ss_dssp HHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHH---HHHTTTEEEEE-CCEESHHH---HHH-------HTCEEE
T ss_pred HHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHH---HHHHcCCeEEE-ccCCCCHH---HHH-------cCCeEE
Confidence 467877 7888999999877655432 222322 112 2455552 35432221 122 245443
Q ss_pred EeeccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhH-hHHhHHHH-HHHHHHHH---HHHcCCCHHHHHHH
Q 012479 263 FAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERG-ILLGAVHG-IVESLFRR---FTENGMNEDLAYKN 337 (462)
Q Consensus 263 iav~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqt-vL~G~~pa-liea~~d~---~v~~G~~~e~A~~~ 337 (462)
++ .. +.+..+.+..+++.+|.. ++.. .+.... ... .+.+...+ ++.++.|. +.+.|++++.++..
T Consensus 137 ~~-~~--~~~~~~~~~~ll~~~g~~-~~~~---~~~~~~---~~~Kl~~n~~~~~~~~~~~E~~~l~~~~G~~~~~~~~~ 206 (295)
T 1yb4_A 137 MV-GG--EQKVFDRVKPLFDILGKN-ITLV---GGNGDG---QTCKVANQIIVALNIEAVSEALVFASKAGADPVRVRQA 206 (295)
T ss_dssp EE-ES--CHHHHHHHHHHHHHHEEE-EEEE---ESTTHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred EE-CC--CHHHHHHHHHHHHHhcCC-EEEe---CCCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 44 33 678899999999999963 2211 111111 111 11232222 33444444 88999999887775
Q ss_pred HHHH
Q 012479 338 TVEC 341 (462)
Q Consensus 338 ~~e~ 341 (462)
..++
T Consensus 207 ~~~~ 210 (295)
T 1yb4_A 207 LMGG 210 (295)
T ss_dssp HTSS
T ss_pred HHcC
Confidence 5443
No 61
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.34 E-value=4.7e-11 Score=131.87 Aligned_cols=208 Identities=11% Similarity=0.065 Sum_probs=135.3
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHH-----------HHcCc-------------eecC
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA-----------RAAGF-------------TEEN 166 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A-----------~~~G~-------------~~~d 166 (462)
++||+|||+|+||.++|.+|.++ |++|++.+++.+ ..+.+ .+.|. ..
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~a------G~~V~l~D~~~~-~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~-- 384 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASK------GTPILMKDINEH-GIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRP-- 384 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHT------TCCEEEECSSHH-HHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEE--
T ss_pred CCEEEEECCChhhHHHHHHHHhC------CCEEEEEECCHH-HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEE--
Confidence 58999999999999999999999 999887766533 23332 22342 21
Q ss_pred CCcCCHhhhhccCCeEEEeecchhH--HHHHHHHHhcCCCCcEEE-EeccchHHHhhhccccCCCCccEEecccCCCchh
Q 012479 167 GTLGDIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (462)
Q Consensus 167 ~~~~~~~eav~~ADvViLavpd~a~--~~vl~eI~~~Lk~gaiL~-~a~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~ 243 (462)
..++ +++++||+||+++|+... ..++.++.++++++++|+ .++++.+..+.+ .+...-+|+..||..|.+.
T Consensus 385 --~~d~-~~~~~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~---~~~~~~~~ig~hf~~P~~~ 458 (715)
T 1wdk_A 385 --TLSY-GDFGNVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISISLLAK---ALKRPENFVGMHFFNPVHM 458 (715)
T ss_dssp --ESSS-TTGGGCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHGG---GCSCGGGEEEEECCSSTTT
T ss_pred --ECCH-HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHHHHHH---HhcCccceEEEEccCCccc
Confidence 3455 788999999999997763 468889999999999875 566777765543 2223347999999887654
Q ss_pred hHHhhhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHHHHHHHHHH
Q 012479 244 VRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRR 323 (462)
Q Consensus 244 vr~lf~~G~~~~G~Gv~aliav~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~paliea~~d~ 323 (462)
+-...+.++...+++.++.+..+++.+|... +... +. .-|-.--++. +.+.|++ .
T Consensus 459 --------------~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~-v~v~---d~--~Gfi~Nril~---~~~~Ea~--~ 513 (715)
T 1wdk_A 459 --------------MPLVEVIRGEKSSDLAVATTVAYAKKMGKNP-IVVN---DC--PGFLVNRVLF---PYFGGFA--K 513 (715)
T ss_dssp --------------CCEEEEEECSSCCHHHHHHHHHHHHHTTCEE-EEEE---SC--TTTTHHHHHH---HHHHHHH--H
T ss_pred --------------CceEEEEECCCCCHHHHHHHHHHHHHhCCEe-EEEc---CC--CChhhhHHHH---HHHHHHH--H
Confidence 1223355677789999999999999999642 2111 11 1221111221 2345552 3
Q ss_pred HHHcCCCHHHHHHHHHHHH---HHHHHHHHHHhcHHHHHH
Q 012479 324 FTENGMNEDLAYKNTVECI---TGIISKIISTQGMLAVYN 360 (462)
Q Consensus 324 ~v~~G~~~e~A~~~~~e~i---~Gli~~li~e~G~~~m~~ 360 (462)
+++.|+++++-.... ... .| --.++-..|++..+.
T Consensus 514 l~~~G~~~~~id~~~-~~~G~p~G-p~~l~D~vGld~~~~ 551 (715)
T 1wdk_A 514 LVSAGVDFVRIDKVM-EKFGWPMG-PAYLMDVVGIDTGHH 551 (715)
T ss_dssp HHHTTCCHHHHHHHH-HHHTCSSC-HHHHHHHHCHHHHHH
T ss_pred HHHCCCCHHHHHHHH-HHcCCCCC-HHHHHHHhhHHHHHH
Confidence 556699998766543 221 13 245555566654443
No 62
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=99.33 E-value=2.8e-12 Score=128.57 Aligned_cols=160 Identities=15% Similarity=0.083 Sum_probs=112.3
Q ss_pred eeecCcccccccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCH
Q 012479 93 IVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI 172 (462)
Q Consensus 93 ~~~~~~~~f~~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~ 172 (462)
-+|+|+|.... ...+.| ++|||||+|+||.++|+.|+.. |.+|+++++...+ ..+.+.|+.. .+.
T Consensus 126 ~~~~g~w~~~~-~~~l~g-~~vgIIG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~~-----~~l 190 (313)
T 2ekl_A 126 LAKSGIFKKIE-GLELAG-KTIGIVGFGRIGTKVGIIANAM------GMKVLAYDILDIR--EKAEKINAKA-----VSL 190 (313)
T ss_dssp HHHTTCCCCCC-CCCCTT-CEEEEESCSHHHHHHHHHHHHT------TCEEEEECSSCCH--HHHHHTTCEE-----CCH
T ss_pred HHHcCCCCCCC-CCCCCC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEECCCcch--hHHHhcCcee-----cCH
Confidence 45778896333 368999 9999999999999999999988 9998776665433 3466778763 488
Q ss_pred hhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEeccchH-------HHhhhccccCCCCccEEecccCCCchh
Q 012479 173 YETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSHGFLL-------GHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (462)
Q Consensus 173 ~eav~~ADvViLavpd~a~-~~vl-~eI~~~Lk~gaiL~~a~G~~i-------~~~~~~~i~~p~~v~VV~v~Pngpg~~ 243 (462)
++++++||+|++++|.... ..++ ++..+.||+|++|+.++--.+ ..+.+..+ -....||+..+|.. .+.
T Consensus 191 ~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i-~ga~lDv~~~eP~~-~~~ 268 (313)
T 2ekl_A 191 EELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKV-YAYATDVFWNEPPK-EEW 268 (313)
T ss_dssp HHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCE-EEEEESCCSSSSCC-SHH
T ss_pred HHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCC-cEEEEecCCCCCCC-Ccc
Confidence 9999999999999997653 4455 467788999998887654322 11111111 11246889999954 443
Q ss_pred hHHhhhcCccccCCCceEEEeecc-CCCHHHHHHH
Q 012479 244 VRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNVA 277 (462)
Q Consensus 244 vr~lf~~G~~~~G~Gv~aliav~q-d~tgea~e~a 277 (462)
...+|. .-+++++||. ..|.+..+.+
T Consensus 269 ~~~L~~--------~~nviltPH~~~~t~~~~~~~ 295 (313)
T 2ekl_A 269 ELELLK--------HERVIVTTHIGAQTKEAQKRV 295 (313)
T ss_dssp HHHHHH--------STTEEECCSCTTCSHHHHHHH
T ss_pred cchHhh--------CCCEEECCccCcCcHHHHHHH
Confidence 446776 3688999997 4455554443
No 63
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.31 E-value=4.7e-12 Score=123.86 Aligned_cols=165 Identities=16% Similarity=0.109 Sum_probs=103.4
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCC-cEEEEEecCCchhHHHHHH-cCceecCCC---------cCCHhhhhccCC
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARA-AGFTEENGT---------LGDIYETISGSD 180 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G-~~Vivg~r~~~~s~~~A~~-~G~~~~d~~---------~~~~~eav~~AD 180 (462)
|||+|||+|+||.++|.+|.++.. ...| ++|+++.| ++..+...+ .|+...+.. ..+..+.++++|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~-~~~g~~~V~~~~r--~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAA-ATDGLLEVSWIAR--GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVD 85 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHH-HTTSSEEEEEECC--HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCcc-ccCCCCCEEEEEc--HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCC
Confidence 589999999999999999986400 0003 67877766 344555555 687642100 013345678999
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEE-EeccchH-HHhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCC
Q 012479 181 LVLLLISDAAQADNYEKIFSCMKPNSILG-LSHGFLL-GHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAG 258 (462)
Q Consensus 181 vViLavpd~a~~~vl~eI~~~Lk~gaiL~-~a~G~~i-~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~G 258 (462)
+||+++|+....++++++.++++++++|+ ...|+.. ..+.+ .+|+. .+++.+|+.+........... .+.|
T Consensus 86 ~vil~vk~~~~~~v~~~i~~~l~~~~~iv~~~nG~~~~~~l~~---~l~~~-~v~~g~~~~~a~~~~pg~~~~---~~~g 158 (317)
T 2qyt_A 86 YILFCTKDYDMERGVAEIRPMIGQNTKILPLLNGADIAERMRT---YLPDT-VVWKGCVYISARKSAPGLITL---EADR 158 (317)
T ss_dssp EEEECCSSSCHHHHHHHHGGGEEEEEEEEECSCSSSHHHHHTT---TSCTT-TBCEEEEEEEEEEEETTEEEE---EEEE
T ss_pred EEEEecCcccHHHHHHHHHhhcCCCCEEEEccCCCCcHHHHHH---HCCCC-cEEEEEEEEEEEEcCCCEEEE---cCCC
Confidence 99999999999999999999998888654 5678765 34443 34443 567777764433210000000 0234
Q ss_pred ceEEEeec-cCCCHHHHHHHHHHHHHhCCC
Q 012479 259 INSSFAVH-QDVDGRATNVALGWSVALGSP 287 (462)
Q Consensus 259 v~aliav~-qd~tgea~e~a~al~~aiG~~ 287 (462)
...+++.. ...+.+.. .+..++...|..
T Consensus 159 ~~~~ig~~~~~~~~~~~-~~~~ll~~~g~~ 187 (317)
T 2qyt_A 159 ELFYFGSGLPEQTDDEV-RLAELLTAAGIR 187 (317)
T ss_dssp EEEEEECCSSSCCHHHH-HHHHHHHHTTCC
T ss_pred ceEEEcCCCCCCcCHHH-HHHHHHHHCCCC
Confidence 33334433 33445666 788999999964
No 64
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=99.30 E-value=1.1e-11 Score=124.02 Aligned_cols=159 Identities=18% Similarity=0.079 Sum_probs=111.1
Q ss_pred eeecCcccc-cccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCC
Q 012479 93 IVRGGRDLF-NLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD 171 (462)
Q Consensus 93 ~~~~~~~~f-~~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~ 171 (462)
-+|+|+|.. ......+.| ++|||||+|+||.++|+.|+.. |.+|+++++...+ +.+.+.|+. ..+
T Consensus 124 ~~~~g~w~~~~~~~~~l~g-~~vgIiG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~-----~~~ 189 (307)
T 1wwk_A 124 KMREGVWAKKEAMGIELEG-KTIGIIGFGRIGYQVAKIANAL------GMNILLYDPYPNE--ERAKEVNGK-----FVD 189 (307)
T ss_dssp HHTTTCCCTTTCCBCCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCH--HHHHHTTCE-----ECC
T ss_pred HHHcCCCCccCcCCcccCC-ceEEEEccCHHHHHHHHHHHHC------CCEEEEECCCCCh--hhHhhcCcc-----ccC
Confidence 356788963 122468999 9999999999999999999988 9998776665433 456677876 347
Q ss_pred HhhhhccCCeEEEeecchh-HHHHH-HHHHhcCCCCcEEEEeccchH-------HHhhhccccCCCCccEEecccCCCch
Q 012479 172 IYETISGSDLVLLLISDAA-QADNY-EKIFSCMKPNSILGLSHGFLL-------GHLQSMGLDFPKNIGVIAVCPKGMGP 242 (462)
Q Consensus 172 ~~eav~~ADvViLavpd~a-~~~vl-~eI~~~Lk~gaiL~~a~G~~i-------~~~~~~~i~~p~~v~VV~v~Pngpg~ 242 (462)
.++++++||+|++++|... ...++ ++..+.||+|++|+.++.-.+ ..+.+.. ......+|+..+|.-+.+
T Consensus 190 l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~-i~ga~lDv~~~eP~~~~~ 268 (307)
T 1wwk_A 190 LETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGW-IAGAGLDVFEEEPLPKDH 268 (307)
T ss_dssp HHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTS-SSEEEESCCSSSSCCTTC
T ss_pred HHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCC-CcEEEEecCCCCCCCCCC
Confidence 8999999999999999765 34555 367788999999886654321 1222211 112356788888853332
Q ss_pred hhHHhhhcCccccCCCceEEEeeccC-CCHHHHHHH
Q 012479 243 SVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNVA 277 (462)
Q Consensus 243 ~vr~lf~~G~~~~G~Gv~aliav~qd-~tgea~e~a 277 (462)
.+|. .-+++++||.. .|.++.+.+
T Consensus 269 ---~L~~--------~~nviltPh~~~~t~~~~~~~ 293 (307)
T 1wwk_A 269 ---PLTK--------FDNVVLTPHIGASTVEAQERA 293 (307)
T ss_dssp ---GGGG--------CTTEEECSSCTTCBHHHHHHH
T ss_pred ---hHHh--------CCCEEECCccccCcHHHHHHH
Confidence 4565 46899999973 455554443
No 65
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.29 E-value=4.7e-11 Score=126.01 Aligned_cols=149 Identities=16% Similarity=0.109 Sum_probs=103.3
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcC-------ceecCCCcCCHhhhhcc---CCe
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-------FTEENGTLGDIYETISG---SDL 181 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G-------~~~~d~~~~~~~eav~~---ADv 181 (462)
|+|+|||+|+||.++|++|.+. |++|.+++|..++..+...+.| +.. ..+++|++++ +|+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~------G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~----~~~~~e~v~~l~~aDv 71 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK------GFKVAVFNRTYSKSEEFMKANASAPFAGNLKA----FETMEAFAASLKKPRK 71 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSHHHHHHHHHHTTTSTTGGGEEE----CSCHHHHHHHBCSSCE
T ss_pred CEEEEEChHHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEE----ECCHHHHHhcccCCCE
Confidence 5899999999999999999999 9998887776444444444446 443 5688888874 999
Q ss_pred EEEeecch-hHHHHHHHHHhcCCCCcEEEEec-cch--HHHhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCC
Q 012479 182 VLLLISDA-AQADNYEKIFSCMKPNSILGLSH-GFL--LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGA 257 (462)
Q Consensus 182 ViLavpd~-a~~~vl~eI~~~Lk~gaiL~~a~-G~~--i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~ 257 (462)
||++||+. ...++++++.+++++|++|++.+ |.. ...+.+ .....++.++. +|...+.. .-. .
T Consensus 72 VilaVp~~~~v~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~--~l~~~g~~~v~-~pv~gg~~---~a~-------~ 138 (478)
T 1pgj_A 72 ALILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQ--QLEAAGLRFLG-MGISGGEE---GAR-------K 138 (478)
T ss_dssp EEECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHH--HHHTTTCEEEE-EEEESHHH---HHH-------H
T ss_pred EEEecCChHHHHHHHHHHHhhCCCCCEEEECCCCChHHHHHHHH--HHHHCCCeEEE-eeccCCHH---HHh-------c
Confidence 99999995 67889999999999999877654 442 222222 11123566664 46543332 112 2
Q ss_pred CceEEEeeccCCCHHHHHHHHHHHHHhCCC
Q 012479 258 GINSSFAVHQDVDGRATNVALGWSVALGSP 287 (462)
Q Consensus 258 Gv~aliav~qd~tgea~e~a~al~~aiG~~ 287 (462)
|. .++ +.. +.++.+.+..+++.+|..
T Consensus 139 g~-~i~-~gg--~~~~~~~v~~ll~~~g~~ 164 (478)
T 1pgj_A 139 GP-AFF-PGG--TLSVWEEIRPIVEAAAAK 164 (478)
T ss_dssp CC-EEE-EEE--CHHHHHHHHHHHHHHSCB
T ss_pred CC-eEe-ccC--CHHHHHHHHHHHHHhccc
Confidence 44 333 333 578899999999999974
No 66
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.28 E-value=3.3e-11 Score=127.18 Aligned_cols=148 Identities=17% Similarity=0.048 Sum_probs=103.2
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHH-----cCceecCCCcCCHhhhhc---cCCeEE
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----AGFTEENGTLGDIYETIS---GSDLVL 183 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~-----~G~~~~d~~~~~~~eav~---~ADvVi 183 (462)
++|+|||+|+||.++|++|.+. |++|.+++|..++ .+...+ .|+.. ..+++++++ ++|+||
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~------G~~V~v~dr~~~~-~~~l~~~~~~g~gi~~----~~~~~e~v~~l~~aDvVi 71 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH------GFVVCAFNRTVSK-VDDFLANEAKGTKVLG----AHSLEEMVSKLKKPRRII 71 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSTHH-HHHHHHTTTTTSSCEE----CSSHHHHHHHBCSSCEEE
T ss_pred CeEEEEChHHHHHHHHHHHHHC------CCeEEEEeCCHHH-HHHHHhccccCCCeEE----eCCHHHHHhhccCCCEEE
Confidence 5899999999999999999999 9998877776544 444444 56654 568888874 899999
Q ss_pred Eeecch-hHHHHHHHHHhcCCCCcEEEEec-cchH--HHhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCc
Q 012479 184 LLISDA-AQADNYEKIFSCMKPNSILGLSH-GFLL--GHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGI 259 (462)
Q Consensus 184 Lavpd~-a~~~vl~eI~~~Lk~gaiL~~a~-G~~i--~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv 259 (462)
++||+. ...++++++.+++++|++|++.+ |... ..+.+ .....++.++ .+|...+... -. .|.
T Consensus 72 laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~--~l~~~g~~~v-~~pv~g~~~~---a~-------~g~ 138 (482)
T 2pgd_A 72 LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCR--DLKDKGILFV-GSGVSGGEDG---AR-------YGP 138 (482)
T ss_dssp ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHH--HHHHTTCEEE-EEEEESHHHH---HH-------HCC
T ss_pred EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHH--HHHHcCCeEe-CCCCCCChhh---hc-------cCC
Confidence 999996 67889999999999999887664 4421 12222 1112356666 4576433221 11 345
Q ss_pred eEEEeeccCCCHHHHHHHHHHHHHhCCC
Q 012479 260 NSSFAVHQDVDGRATNVALGWSVALGSP 287 (462)
Q Consensus 260 ~aliav~qd~tgea~e~a~al~~aiG~~ 287 (462)
.++ +.. +.++.+.+..+++.+|..
T Consensus 139 -~i~-~gg--~~e~~~~v~~ll~~~g~~ 162 (482)
T 2pgd_A 139 -SLM-PGG--NKEAWPHIKAIFQGIAAK 162 (482)
T ss_dssp -EEE-EEE--CTTTHHHHHHHHHHHSCB
T ss_pred -eEE-eCC--CHHHHHHHHHHHHHhhhh
Confidence 333 333 367888999999999974
No 67
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.27 E-value=5.4e-12 Score=126.82 Aligned_cols=161 Identities=16% Similarity=0.106 Sum_probs=109.7
Q ss_pred eeecCcccc----cccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEec-CCchhHHHHHHcCceecCC
Q 012479 93 IVRGGRDLF----NLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR-KGSRSFAEARAAGFTEENG 167 (462)
Q Consensus 93 ~~~~~~~~f----~~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r-~~~~s~~~A~~~G~~~~d~ 167 (462)
-+|.|+|.. ......+.| ++|||||+|+||.++|+.|+.. |.+|++.++ ...+ ..+.+.|+..
T Consensus 125 ~~~~g~w~~~~~~~~~~~~l~g-~~vgIIG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~--~~~~~~g~~~--- 192 (320)
T 1gdh_A 125 MIRTRSWPGWEPLELVGEKLDN-KTLGIYGFGSIGQALAKRAQGF------DMDIDYFDTHRASS--SDEASYQATF--- 192 (320)
T ss_dssp HHHTTCCCCCCTTTTCBCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSCCCH--HHHHHHTCEE---
T ss_pred HHHcCCCCccccccccCcCCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEECCCCcCh--hhhhhcCcEE---
Confidence 457788852 122367999 9999999999999999999988 888877666 4333 3566678763
Q ss_pred CcCCHhhhhccCCeEEEeecchh-HHHHHH-HHHhcCCCCcEEEEeccchH-------HHhhhccccCCCCccEEecccC
Q 012479 168 TLGDIYETISGSDLVLLLISDAA-QADNYE-KIFSCMKPNSILGLSHGFLL-------GHLQSMGLDFPKNIGVIAVCPK 238 (462)
Q Consensus 168 ~~~~~~eav~~ADvViLavpd~a-~~~vl~-eI~~~Lk~gaiL~~a~G~~i-------~~~~~~~i~~p~~v~VV~v~Pn 238 (462)
..+.++++++||+|++++|... ...++. +..+.||+|++|+.++.-.+ ..+.+..+. ....+|+..+|
T Consensus 193 -~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~-gA~lDv~~~eP- 269 (320)
T 1gdh_A 193 -HDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLA-YAGFDVFAGEP- 269 (320)
T ss_dssp -CSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE-EEEESCCTTTT-
T ss_pred -cCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCc-EEEEeCCCCCC-
Confidence 3478999999999999999764 445664 57889999998886653221 122221111 23467777788
Q ss_pred CCchhhHHhhhcCccccCCCceEEEeecc-CCCHHHHHHHHH
Q 012479 239 GMGPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNVALG 279 (462)
Q Consensus 239 gpg~~vr~lf~~G~~~~G~Gv~aliav~q-d~tgea~e~a~a 279 (462)
|. ...+|. .-+++++||. ..|.++.+.+..
T Consensus 270 -~~--~~~L~~--------~~nviltPH~~~~t~~~~~~~~~ 300 (320)
T 1gdh_A 270 -NI--NEGYYD--------LPNTFLFPHIGSAATQAREDMAH 300 (320)
T ss_dssp -SC--CTTGGG--------CTTEEECSSCTTCBHHHHHHHHH
T ss_pred -CC--CChhhh--------CCCEEECCcCCcCcHHHHHHHHH
Confidence 22 224565 4789999997 445555544433
No 68
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.26 E-value=3.2e-11 Score=116.11 Aligned_cols=149 Identities=15% Similarity=0.075 Sum_probs=96.4
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHc---Cc--eecCCCcCCHhhhhccCCeEEEee
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA---GF--TEENGTLGDIYETISGSDLVLLLI 186 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~---G~--~~~d~~~~~~~eav~~ADvViLav 186 (462)
|||+|||+|+||.++|.+|.++ |++|++.+|...+..+ .... |. .. .-.. +..++++++|+||+++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~r~~~~~~~-l~~~~~~~~~~~~-~~~~-~~~~~~~~~d~vi~~v 71 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQ------GHEVQGWLRVPQPYCS-VNLVETDGSIFNE-SLTA-NDPDFLATSDLLLVTL 71 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCSEEE-EEEECTTSCEEEE-EEEE-SCHHHHHTCSEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhC------CCCEEEEEcCccceee-EEEEcCCCceeee-eeee-cCccccCCCCEEEEEe
Confidence 5899999999999999999999 9998887765432211 1111 11 00 0012 2346788999999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEE-EeccchH-HHhhhccccCCC---Cc---cEEecccCCCchhhHHhhhcCccccCCC
Q 012479 187 SDAAQADNYEKIFSCMKPNSILG-LSHGFLL-GHLQSMGLDFPK---NI---GVIAVCPKGMGPSVRRLYVQGKEINGAG 258 (462)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~gaiL~-~a~G~~i-~~~~~~~i~~p~---~v---~VV~v~Pngpg~~vr~lf~~G~~~~G~G 258 (462)
|+....++++++.++++++++|+ ...|+.. ..+.+ .+++ .+ ...+.+| .+.+. +.|
T Consensus 72 ~~~~~~~v~~~l~~~l~~~~~vv~~~~g~~~~~~l~~---~~~~~~~g~~~~~~~~~~p-~~~~~------------~~g 135 (291)
T 1ks9_A 72 KAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEELQN---IQQPLLMGTTTHAARRDGN-VIIHV------------ANG 135 (291)
T ss_dssp CGGGHHHHHHHHHTTSCTTSCEEEECSSSCTTGGGTT---CCSCEEEEEECCEEEEETT-EEEEE------------ECC
T ss_pred cHHhHHHHHHHHHhhCCCCCEEEEecCCCCcHHHHHH---hcCCeEEEEEeEccEEcCC-EEEEe------------ccc
Confidence 99999999999999999998654 5677754 23333 3333 00 1123344 22211 256
Q ss_pred ceEEEeeccCCCHHHHHHHHHHHHHhCCC
Q 012479 259 INSSFAVHQDVDGRATNVALGWSVALGSP 287 (462)
Q Consensus 259 v~aliav~qd~tgea~e~a~al~~aiG~~ 287 (462)
... +.+.. .+.+..+.+..+++.+|..
T Consensus 136 ~~~-i~~~~-~~~~~~~~~~~ll~~~g~~ 162 (291)
T 1ks9_A 136 ITH-IGPAR-QQDGDYSYLADILQTVLPD 162 (291)
T ss_dssp CEE-EEESS-GGGTTCTHHHHHHHTTSSC
T ss_pred ceE-EccCC-CCcchHHHHHHHHHhcCCC
Confidence 644 54432 2456678889999999965
No 69
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.25 E-value=3e-10 Score=119.35 Aligned_cols=210 Identities=13% Similarity=0.098 Sum_probs=132.1
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHH-----------cCceec-------CCCcCCH
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----------AGFTEE-------NGTLGDI 172 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~-----------~G~~~~-------d~~~~~~ 172 (462)
+++|+|||+|.||.++|..|..+ |++|++.+++ ....+.+.+ .|.... .....+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~------G~~V~l~D~~-~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 109 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV------GISVVAVESD-PKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST 109 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT------TCEEEEECSS-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG
T ss_pred CCEEEEECcCHHHHHHHHHHHhC------CCeEEEEECC-HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH
Confidence 48999999999999999999999 9998776654 333333322 121000 0002355
Q ss_pred hhhhccCCeEEEeecchhH--HHHHHHHHhcCCCCcEEEE-eccchHHHhhhccccCCCCccEEecccCCCchhhHHhhh
Q 012479 173 YETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILGL-SHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYV 249 (462)
Q Consensus 173 ~eav~~ADvViLavpd~a~--~~vl~eI~~~Lk~gaiL~~-a~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~ 249 (462)
+++++||+||+++|.... .++++++.++++++++|+. +++..+..+.. .+...-+|+..||..|.+.
T Consensus 110 -~~~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~~~~~la~---~~~~~~~~ig~hf~~P~~~------ 179 (463)
T 1zcj_A 110 -KELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIAS---STDRPQLVIGTHFFSPAHV------ 179 (463)
T ss_dssp -GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHT---TSSCGGGEEEEEECSSTTT------
T ss_pred -HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCcCHHHHHH---HhcCCcceEEeecCCCccc------
Confidence 678999999999997653 5688899999999998764 34555555443 2233357999999877543
Q ss_pred cCccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHH-HHHHHHHHHHHHHcC
Q 012479 250 QGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAV-HGIVESLFRRFTENG 328 (462)
Q Consensus 250 ~G~~~~G~Gv~aliav~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~-paliea~~d~~v~~G 328 (462)
+-...+.++...+++.++.+..+++.+|... +.. .+ ..-| +++-+ ..++...+ .+++.|
T Consensus 180 --------~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~-v~v---~~--~~gf-----i~Nrll~~~~~ea~-~l~~~G 239 (463)
T 1zcj_A 180 --------MRLLEVIPSRYSSPTTIATVMSLSKKIGKIG-VVV---GN--CYGF-----VGNRMLAPYYNQGF-FLLEEG 239 (463)
T ss_dssp --------CCEEEEEECSSCCHHHHHHHHHHHHHTTCEE-EEB---CC--STTT-----THHHHHHHHHHHHH-HHHHTT
T ss_pred --------ceeEEEeCCCCCCHHHHHHHHHHHHHhCCEE-EEE---CC--CccH-----HHHHHHHHHHHHHH-HHHHcC
Confidence 2234456677789999999999999999642 211 11 1222 22222 22222223 456679
Q ss_pred CCHHHHHHHHHHHH---HHHHHHHHHHhcHHHHH
Q 012479 329 MNEDLAYKNTVECI---TGIISKIISTQGMLAVY 359 (462)
Q Consensus 329 ~~~e~A~~~~~e~i---~Gli~~li~e~G~~~m~ 359 (462)
.++++.....- .+ .| -..++-..|++..+
T Consensus 240 ~~~~~id~~~~-~~g~p~G-p~~l~D~~GlD~~~ 271 (463)
T 1zcj_A 240 SKPEDVDGVLE-EFGFKMG-PFRVSDLAGLDVGW 271 (463)
T ss_dssp CCHHHHHHHHH-HHTCSSC-HHHHHHHHCHHHHH
T ss_pred CCHHHHHHHHH-HcCCCCc-HHHHHHHcchHHHH
Confidence 99987665332 11 13 34555666775443
No 70
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.90 E-value=5.9e-13 Score=125.20 Aligned_cols=151 Identities=14% Similarity=0.100 Sum_probs=104.1
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeec
Q 012479 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (462)
Q Consensus 108 l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavp 187 (462)
.++ +||+|||+|+||.++|.+|.+. |++|+++.|... .+.....|+. ..+..++++++|+||+++|
T Consensus 17 ~~~-~~I~iIG~G~mG~~la~~L~~~------G~~V~~~~r~~~--~~~~~~~g~~-----~~~~~~~~~~aDvVilav~ 82 (201)
T 2yjz_A 17 EKQ-GVVCIFGTGDFGKSLGLKMLQC------GYSVVFGSRNPQ--VSSLLPRGAE-----VLCYSEAASRSDVIVLAVH 82 (201)
Confidence 556 8999999999999999999988 888877766533 2333334555 2377889999999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEE-EEeccch--------HHHhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCC
Q 012479 188 DAAQADNYEKIFSCMKPNSIL-GLSHGFL--------LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAG 258 (462)
Q Consensus 188 d~a~~~vl~eI~~~Lk~gaiL-~~a~G~~--------i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~G 258 (462)
++...+++ ++.+ ++++++| ..+.|+. ..+++. .+|. .++|+++||+|.......-..| .
T Consensus 83 ~~~~~~v~-~l~~-~~~~~ivI~~~~G~~~~~~~~~~~~~l~~---~~~~-~~vvra~~n~~a~~~~~g~l~g------~ 150 (201)
T 2yjz_A 83 REHYDFLA-ELAD-SLKGRVLIDVSNNQKMNQYPESNAEYLAQ---LVPG-AHVVKAFNTISAWALQSGTLDA------S 150 (201)
Confidence 98777776 5554 4567765 4666774 234433 3343 4899999999887632111111 1
Q ss_pred ceEEEeeccCCCHHHHHHHHHHHHHhCCC
Q 012479 259 INSSFAVHQDVDGRATNVALGWSVALGSP 287 (462)
Q Consensus 259 v~aliav~qd~tgea~e~a~al~~aiG~~ 287 (462)
...+++ .. +.++++.+..+++++|..
T Consensus 151 ~~~~~~-g~--~~~~~~~v~~ll~~~G~~ 176 (201)
T 2yjz_A 151 RQVFVC-GN--DSKAKDRVMDIARTLGLT 176 (201)
Confidence 123333 33 467899999999999964
No 71
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=99.25 E-value=2.9e-11 Score=122.53 Aligned_cols=157 Identities=15% Similarity=0.056 Sum_probs=110.9
Q ss_pred eeecCcccccc-cccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCC
Q 012479 93 IVRGGRDLFNL-LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD 171 (462)
Q Consensus 93 ~~~~~~~~f~~-~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~ 171 (462)
-+|+|+|.... ....+.| ++|||||+|+||.++|+.|+.. |.+|+++++...+ +.+.+.|+. ..+
T Consensus 147 ~~~~g~W~~~~~~~~~l~g-~tvgIIGlG~IG~~vA~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~-----~~~ 212 (335)
T 2g76_A 147 SMKDGKWERKKFMGTELNG-KTLGILGLGRIGREVATRMQSF------GMKTIGYDPIISP--EVSASFGVQ-----QLP 212 (335)
T ss_dssp HHHTTCCCTGGGCBCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSSCH--HHHHHTTCE-----ECC
T ss_pred HHHcCCCCccCCCCcCCCc-CEEEEEeECHHHHHHHHHHHHC------CCEEEEECCCcch--hhhhhcCce-----eCC
Confidence 45778996432 2467999 9999999999999999999987 9998766655333 456677876 358
Q ss_pred HhhhhccCCeEEEeecchh-HHHHH-HHHHhcCCCCcEEEEeccchH-------HHhhhccccCCCCccEEecccCCCch
Q 012479 172 IYETISGSDLVLLLISDAA-QADNY-EKIFSCMKPNSILGLSHGFLL-------GHLQSMGLDFPKNIGVIAVCPKGMGP 242 (462)
Q Consensus 172 ~~eav~~ADvViLavpd~a-~~~vl-~eI~~~Lk~gaiL~~a~G~~i-------~~~~~~~i~~p~~v~VV~v~Pngpg~ 242 (462)
.++++++||+|++++|... ...++ +++.+.||+|++|+.++.-.+ ..+.+..+ .....+|+..+|. +.
T Consensus 213 l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i-~gA~lDV~~~EP~-~~- 289 (335)
T 2g76_A 213 LEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQC-AGAALDVFTEEPP-RD- 289 (335)
T ss_dssp HHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSE-EEEEESCCSSSSC-SC-
T ss_pred HHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCc-cEEEEeecCCCCC-CC-
Confidence 8999999999999999875 45566 468899999999887764321 12222111 1124678888983 22
Q ss_pred hhHHhhhcCccccCCCceEEEeecc-CCCHHHHHH
Q 012479 243 SVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNV 276 (462)
Q Consensus 243 ~vr~lf~~G~~~~G~Gv~aliav~q-d~tgea~e~ 276 (462)
..+|. .-+++++||. ..|.++.+.
T Consensus 290 --~~L~~--------~~nvilTPH~~~~t~e~~~~ 314 (335)
T 2g76_A 290 --RALVD--------HENVISCPHLGASTKEAQSR 314 (335)
T ss_dssp --CHHHH--------STTEEECSSCTTCBHHHHHH
T ss_pred --chHHh--------CCCEEECCcCCCCCHHHHHH
Confidence 34665 3689999997 445555443
No 72
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.23 E-value=2.1e-10 Score=121.69 Aligned_cols=152 Identities=17% Similarity=0.057 Sum_probs=103.9
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecC-CCcCCHhhhhc---cCCeEEEeec
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN-GTLGDIYETIS---GSDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d-~~~~~~~eav~---~ADvViLavp 187 (462)
++|||||+|+||.++|++|.+. |++|++++|+.++ .+...+.|..... ....+++|+++ ++|+||++||
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~------G~~V~v~dr~~~~-~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp 77 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH------GFVVCAFNRTVSK-VDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVK 77 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSTHH-HHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSC
T ss_pred CEEEEEChhHHHHHHHHHHHHC------CCEEEEEeCCHHH-HHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecC
Confidence 7899999999999999999999 9998887776554 4444443321000 01467888887 5999999999
Q ss_pred ch-hHHHHHHHHHhcCCCCcEEEEeccchH---HHhhhccccCCCCccEEecccCCCchhhHHhhhcCccccCCCceEEE
Q 012479 188 DA-AQADNYEKIFSCMKPNSILGLSHGFLL---GHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSF 263 (462)
Q Consensus 188 d~-a~~~vl~eI~~~Lk~gaiL~~a~G~~i---~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~~~~G~Gv~ali 263 (462)
+. ...++++++.++|++|++|++.+.... ....+ .....++.++.. |..-+.. .-.. |. +++
T Consensus 78 ~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~--~l~~~Gi~fvd~-pVsGg~~---gA~~-------G~-~im 143 (484)
T 4gwg_A 78 AGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCR--DLKAKGILFVGS-GVSGGEE---GARY-------GP-SLM 143 (484)
T ss_dssp SSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHH--HHHHTTCEEEEE-EEESHHH---HHHH-------CC-EEE
T ss_pred ChHHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHH--HHHhhccccccC-CccCCHH---HHhc-------CC-eee
Confidence 95 667899999999999999988876532 11111 111346777763 6422221 1122 34 433
Q ss_pred eeccCCCHHHHHHHHHHHHHhCCC
Q 012479 264 AVHQDVDGRATNVALGWSVALGSP 287 (462)
Q Consensus 264 av~qd~tgea~e~a~al~~aiG~~ 287 (462)
+.. +.++.+.++.+++.+|..
T Consensus 144 -~GG--~~ea~~~v~pll~~ig~~ 164 (484)
T 4gwg_A 144 -PGG--NKEAWPHIKTIFQGIAAK 164 (484)
T ss_dssp -EEE--CGGGHHHHHHHHHHHSCB
T ss_pred -cCC--CHHHHHHHHHHHHHhcCc
Confidence 444 468999999999999974
No 73
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.23 E-value=9.8e-11 Score=116.09 Aligned_cols=152 Identities=21% Similarity=0.179 Sum_probs=104.2
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecC--C--------CcCCHhhhhccCCe
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN--G--------TLGDIYETISGSDL 181 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d--~--------~~~~~~eav~~ADv 181 (462)
+||+|||.|+||.++|..|.++ |.+|.++.|.. .+..++.|+.... + .+.+. +.++.+|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~------g~~V~~~~r~~---~~~i~~~g~~~~~~~g~~~~~~~~~~~~~-~~~~~~D~ 72 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS------GEDVHFLLRRD---YEAIAGNGLKVFSINGDFTLPHVKGYRAP-EEIGPMDL 72 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT------SCCEEEECSTT---HHHHHHTCEEEEETTCCEEESCCCEESCH-HHHCCCSE
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCeEEEEEcCc---HHHHHhCCCEEEcCCCeEEEeeceeecCH-HHcCCCCE
Confidence 7899999999999999999999 88888877753 3555667764311 0 01233 44789999
Q ss_pred EEEeecchhHHHHHHHHHhcCCCCcE-EEEeccch-HHHhhhccccCCCCccEEecc------cCCCchhhHHhhhcCcc
Q 012479 182 VLLLISDAAQADNYEKIFSCMKPNSI-LGLSHGFL-LGHLQSMGLDFPKNIGVIAVC------PKGMGPSVRRLYVQGKE 253 (462)
Q Consensus 182 ViLavpd~a~~~vl~eI~~~Lk~gai-L~~a~G~~-i~~~~~~~i~~p~~v~VV~v~------Pngpg~~vr~lf~~G~~ 253 (462)
||++||+.+..+++++|.|+++++++ |+...|+. ...+.+ .+|++ +|+..+ -.+|+++.. .
T Consensus 73 vilavk~~~~~~~l~~l~~~l~~~~~iv~l~nGi~~~~~l~~---~~~~~-~v~~~~~~~~a~~~~p~~v~~---~---- 141 (312)
T 3hn2_A 73 VLVGLKTFANSRYEELIRPLVEEGTQILTLQNGLGNEEALAT---LFGAE-RIIGGVAFLCSNRGEPGEVHH---L---- 141 (312)
T ss_dssp EEECCCGGGGGGHHHHHGGGCCTTCEEEECCSSSSHHHHHHH---HTCGG-GEEEEEEEEECCBCSSSEEEE---C----
T ss_pred EEEecCCCCcHHHHHHHHhhcCCCCEEEEecCCCCcHHHHHH---HCCCC-cEEEEEEEeeeEEcCCcEEEE---C----
Confidence 99999999999999999999999886 56778985 444444 34442 454433 345666521 1
Q ss_pred ccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCC
Q 012479 254 INGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (462)
Q Consensus 254 ~~G~Gv~aliav~qd~tgea~e~a~al~~aiG~~ 287 (462)
|.|... ++.....+.+..+.+.+++...|..
T Consensus 142 --~~g~~~-ig~~~~~~~~~~~~l~~~l~~~g~~ 172 (312)
T 3hn2_A 142 --GAGRII-LGEFLPRDTGRIEELAAMFRQAGVD 172 (312)
T ss_dssp --EEEEEE-EEESSCCCSHHHHHHHHHHHHTTCC
T ss_pred --CCCeEE-EecCCCCccHHHHHHHHHHHhCCCC
Confidence 234433 4444434456667778888888864
No 74
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.22 E-value=4.7e-10 Score=124.13 Aligned_cols=243 Identities=11% Similarity=0.058 Sum_probs=142.3
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHH-----------cCceec-------C--CCcC
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----------AGFTEE-------N--GTLG 170 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~-----------~G~~~~-------d--~~~~ 170 (462)
|+||+|||.|.||.++|.+|.++ |++|++++++.+ ..+.+.+ .|.... + ....
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~a------G~~V~l~D~~~~-~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~ 384 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILS------NYPVILKEVNEK-FLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSL 384 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTT------TCCEEEECSSHH-HHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEES
T ss_pred CcEEEEEcCCHhhHHHHHHHHhC------CCEEEEEECCHH-HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeC
Confidence 48999999999999999999999 999887766533 3333221 232100 0 0123
Q ss_pred CHhhhhccCCeEEEeecchhH--HHHHHHHHhcCCCCcEEE-EeccchHHHhhhccccCCCCccEEecccCCCchhhHHh
Q 012479 171 DIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRL 247 (462)
Q Consensus 171 ~~~eav~~ADvViLavpd~a~--~~vl~eI~~~Lk~gaiL~-~a~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~l 247 (462)
+. +++++||+||+++|+... ..++.++.++++++++|+ .++++.+..+.+ .....-+|+..|+--|.+.
T Consensus 385 d~-~~~~~aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~---~~~~p~~~iG~hf~~P~~~---- 456 (725)
T 2wtb_A 385 DY-ESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDLNKIGE---RTKSQDRIVGAHFFSPAHI---- 456 (725)
T ss_dssp SS-GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTT---TCSCTTTEEEEEECSSTTT----
T ss_pred CH-HHHCCCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCHHHHHH---HhcCCCCEEEecCCCCccc----
Confidence 45 678999999999998764 468889999999999875 466776655543 2222236899998766543
Q ss_pred hhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHhHHHHHHHHHHHHHHHc
Q 012479 248 YVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTEN 327 (462)
Q Consensus 248 f~~G~~~~G~Gv~aliav~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G~~paliea~~d~~v~~ 327 (462)
+-...+.++...+++.++.+..+++.+|.. ++... +. .-|-.--++. +.+.|+ -.+++.
T Consensus 457 ----------~~lvevv~g~~t~~e~~~~~~~l~~~lGk~-~v~v~---d~--~Gfi~Nril~---~~~~Ea--~~l~~~ 515 (725)
T 2wtb_A 457 ----------MPLLEIVRTNHTSAQVIVDLLDVGKKIKKT-PVVVG---NC--TGFAVNRMFF---PYTQAA--MFLVEC 515 (725)
T ss_dssp ----------CCEEEEEECSSCCHHHHHHHHHHHHHTTCE-EEEEE---SS--TTTTHHHHHH---HHHHHH--HHHHHT
T ss_pred ----------CceEEEEECCCCCHHHHHHHHHHHHHhCCE-EEEEC---CC--ccHHHHHHHH---HHHHHH--HHHHHC
Confidence 123335567778999999999999999964 22111 11 1121111121 235555 235566
Q ss_pred CCCHHHHHHHHHHHHH---HHHHHHHHHhcHHHHHHhcCCcchhhhchhhccCchhHHHHHHHHHHhccCChhhhH
Q 012479 328 GMNEDLAYKNTVECIT---GIISKIISTQGMLAVYNSFSGEDKKEFEKAYSASYYPCMEILYECYEDVAAGSEIRS 400 (462)
Q Consensus 328 G~~~e~A~~~~~e~i~---Gli~~li~e~G~~~m~~~vs~~~~aeyg~~~~~~~~~~~~~m~e~~~~i~~G~far~ 400 (462)
|+++++..... ...- | --.++-..|++..++-... -...|++. .|.| ..+++++ ..|.+.|+
T Consensus 516 G~~~e~id~~~-~~~g~p~G-p~~l~D~vGld~~~~i~~~-~~~~~~~~---~~~~--~~l~~~v---~~g~lG~k 580 (725)
T 2wtb_A 516 GADPYLIDRAI-SKFGMPMG-PFRLCDLVGFGVAIATATQ-FIENFSER---TYKS--MIIPLMQ---EDKRAGEA 580 (725)
T ss_dssp TCCHHHHHHHH-HHHTCSSC-HHHHHHHHCHHHHHHHHHH-HHHHSGGG---CCCC--THHHHHH---TTC-----
T ss_pred CCCHHHHHHHH-HHcCCCCC-HHHHHHHhchHHHHHHHHH-HHHhcCCc---cCCh--HHHHHHH---HCCCceec
Confidence 99998776644 2211 3 2455556676544433221 11223431 1343 3555544 45777765
No 75
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.17 E-value=4.2e-11 Score=112.61 Aligned_cols=138 Identities=17% Similarity=0.127 Sum_probs=91.9
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEe
Q 012479 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLa 185 (462)
..+.+ +||+|||+|+||.++|..|.+. |++|++++|... ++++||+||++
T Consensus 15 ~~~~~-~~I~iiG~G~mG~~la~~l~~~------g~~V~~~~~~~~-----------------------~~~~aD~vi~a 64 (209)
T 2raf_A 15 LYFQG-MEITIFGKGNMGQAIGHNFEIA------GHEVTYYGSKDQ-----------------------ATTLGEIVIMA 64 (209)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHT------TCEEEEECTTCC-----------------------CSSCCSEEEEC
T ss_pred cccCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCHH-----------------------HhccCCEEEEc
Confidence 55667 9999999999999999999998 988877665422 35689999999
Q ss_pred ecchhHHHHHHHHHhcCCCCcEEEE-eccch---------------HHHhhhccccCCCCccEEe-cccCCCchhhHHhh
Q 012479 186 ISDAAQADNYEKIFSCMKPNSILGL-SHGFL---------------LGHLQSMGLDFPKNIGVIA-VCPKGMGPSVRRLY 248 (462)
Q Consensus 186 vpd~a~~~vl~eI~~~Lk~gaiL~~-a~G~~---------------i~~~~~~~i~~p~~v~VV~-v~Pngpg~~vr~lf 248 (462)
+|+....++++++.+.++ +++|++ +.|+. ...+++ .+| +.+|++ ++|.. ++.....-
T Consensus 65 v~~~~~~~v~~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~---~l~-~~~vv~~~~~~~-~p~~~~~~ 138 (209)
T 2raf_A 65 VPYPALAALAKQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQ---QLP-DSQVLKAFNTTF-AATLQSGQ 138 (209)
T ss_dssp SCHHHHHHHHHHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHH---HCT-TSEEEECSTTSC-HHHHHHSE
T ss_pred CCcHHHHHHHHHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHH---HCC-CCcEEEeeeccc-Hhhccccc
Confidence 999999999999999888 887664 45664 233333 334 467888 55531 22211111
Q ss_pred hcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCC
Q 012479 249 VQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGS 286 (462)
Q Consensus 249 ~~G~~~~G~Gv~aliav~qd~tgea~e~a~al~~aiG~ 286 (462)
.. |.+...++. .. .+.++.+.+.++++.+|.
T Consensus 139 ~~-----g~~~~~~~~-~g-~~~~~~~~v~~ll~~~G~ 169 (209)
T 2raf_A 139 VN-----GKEPTTVLV-AG-NDDSAKQRFTRALADSPL 169 (209)
T ss_dssp ET-----TTEECEEEE-EE-SCHHHHHHHHHHTTTSSC
T ss_pred cC-----CCCCceeEE-cC-CCHHHHHHHHHHHHHcCC
Confidence 11 112333222 22 257889999999999996
No 76
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.16 E-value=1.1e-09 Score=113.94 Aligned_cols=199 Identities=13% Similarity=0.121 Sum_probs=121.3
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHH-------------------cC-ceecCCCcCC
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-------------------AG-FTEENGTLGD 171 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~-------------------~G-~~~~d~~~~~ 171 (462)
|||+|||+|.||.++|..|.+. |++|++.++. .+..+...+ .| +.. +.+
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~------G~~V~~~d~~-~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~----t~~ 69 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSAR------GHEVIGVDVS-STKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG----TTD 69 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE----ESC
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCEEEEEECC-HHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEE----eCC
Confidence 5899999999999999999999 9988665554 333433333 23 332 457
Q ss_pred HhhhhccCCeEEEeecchh----------HHHHHHHHHhcCCC---CcEEEEeccchHHH----h----hhc-cccCCCC
Q 012479 172 IYETISGSDLVLLLISDAA----------QADNYEKIFSCMKP---NSILGLSHGFLLGH----L----QSM-GLDFPKN 229 (462)
Q Consensus 172 ~~eav~~ADvViLavpd~a----------~~~vl~eI~~~Lk~---gaiL~~a~G~~i~~----~----~~~-~i~~p~~ 229 (462)
.++++++||+||+++|... ..+++++|.+++++ +++|++.+++.... + ... +.....+
T Consensus 70 ~~~~~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g~~~~~~ 149 (436)
T 1mv8_A 70 FKKAVLDSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVD 149 (436)
T ss_dssp HHHHHHTCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCBTTT
T ss_pred HHHHhccCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHhcCcccCCc
Confidence 8888999999999998655 77888999999999 89887765442211 1 110 1111112
Q ss_pred ccEEecccC--CCchhhHHhhhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhH
Q 012479 230 IGVIAVCPK--GMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERG 307 (462)
Q Consensus 230 v~VV~v~Pn--gpg~~vr~lf~~G~~~~G~Gv~aliav~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqt 307 (462)
.. +...|. .|+..+.+++. .+.++ +.. .++++.+.+..++..+|.. ++.++... .+.-.+.+.+
T Consensus 150 ~~-v~~~Pe~~~~G~~~~~~~~---------~~~iv-~G~-~~~~~~~~~~~l~~~~~~~-v~~~~~~~-ae~~Kl~~N~ 215 (436)
T 1mv8_A 150 FG-VGTNPEFLRESTAIKDYDF---------PPMTV-IGE-LDKQTGDLLEEIYRELDAP-IIRKTVEV-AEMIKYTCNV 215 (436)
T ss_dssp BE-EEECCCCCCTTSHHHHHHS---------CSCEE-EEE-SSHHHHHHHHHHHTTSSSC-EEEEEHHH-HHHHHHHHHH
T ss_pred EE-EEECcccccccccchhccC---------CCEEE-EEc-CCHHHHHHHHHHHhccCCC-EEcCCHHH-HHHHHHHHHH
Confidence 23 344554 44544444333 12222 222 2578899999999999963 32232211 1111121211
Q ss_pred hHHhHHHHHHHHHHHHHHHcCCCHHHHHH
Q 012479 308 ILLGAVHGIVESLFRRFTENGMNEDLAYK 336 (462)
Q Consensus 308 vL~G~~paliea~~d~~v~~G~~~e~A~~ 336 (462)
.....-+++..+...+.+.|+++++...
T Consensus 216 -~~a~~ia~~nE~~~l~~~~Gid~~~v~~ 243 (436)
T 1mv8_A 216 -WHAAKVTFANEIGNIAKAVGVDGREVMD 243 (436)
T ss_dssp -HHHHHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 1122235777788888899999876544
No 77
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.16 E-value=1.5e-10 Score=118.15 Aligned_cols=157 Identities=20% Similarity=0.162 Sum_probs=107.5
Q ss_pred eecCcccccc-----------cccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCc
Q 012479 94 VRGGRDLFNL-----------LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF 162 (462)
Q Consensus 94 ~~~~~~~f~~-----------~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~ 162 (462)
+|+|+|.... ....+.| ++|||||+|.||.++|+.|+.. |.+|+++++. ...+.+.+.|+
T Consensus 133 ~~~g~W~~~~~~~~~~~~~~~~~~~l~g-~tvGIIGlG~IG~~vA~~l~~~------G~~V~~~d~~--~~~~~~~~~g~ 203 (352)
T 3gg9_A 133 LKHGAWQQSGLKSTTMPPNFGIGRVLKG-QTLGIFGYGKIGQLVAGYGRAF------GMNVLVWGRE--NSKERARADGF 203 (352)
T ss_dssp HHTTCTTCCCCCCTTSCTTTTSBCCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSH--HHHHHHHHTTC
T ss_pred HHcCCCCcccccccccccccccCccCCC-CEEEEEeECHHHHHHHHHHHhC------CCEEEEECCC--CCHHHHHhcCc
Confidence 4667886531 2478999 9999999999999999999988 9998766554 23456677888
Q ss_pred eecCCCcCCHhhhhccCCeEEEeecchhH-HHHHH-HHHhcCCCCcEEEEeccch-------HHHhhhccccCCCCccEE
Q 012479 163 TEENGTLGDIYETISGSDLVLLLISDAAQ-ADNYE-KIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFPKNIGVI 233 (462)
Q Consensus 163 ~~~d~~~~~~~eav~~ADvViLavpd~a~-~~vl~-eI~~~Lk~gaiL~~a~G~~-------i~~~~~~~i~~p~~v~VV 233 (462)
.. +.+.+|++++||+|++++|.... ..++. +..+.||+|++|+.++--. +..+++..+. ....||+
T Consensus 204 ~~----~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~-gA~lDV~ 278 (352)
T 3gg9_A 204 AV----AESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPG-MAAIDVF 278 (352)
T ss_dssp EE----CSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSS-EEEECCC
T ss_pred eE----eCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCcc-EEEeccc
Confidence 74 45899999999999999996544 44554 6889999999998776321 1222221111 2345677
Q ss_pred ecccCCCchhhHHhhhcCccccCCCceEEEeecc-CCCHHHHH
Q 012479 234 AVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATN 275 (462)
Q Consensus 234 ~v~Pngpg~~vr~lf~~G~~~~G~Gv~aliav~q-d~tgea~e 275 (462)
.-.|--+.+. ++. --+.+++||- ..+.+..+
T Consensus 279 ~~EPl~~~~p---L~~--------~~nvilTPHia~~t~e~~~ 310 (352)
T 3gg9_A 279 ETEPILQGHT---LLR--------MENCICTPHIGYVERESYE 310 (352)
T ss_dssp SSSCCCSCCG---GGG--------CTTEEECCSCTTCBHHHHH
T ss_pred CCCCCCCCCh---hhc--------CCCEEECCCCCCCCHHHHH
Confidence 6666433332 343 2578899987 34444433
No 78
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=99.16 E-value=2.3e-10 Score=116.24 Aligned_cols=155 Identities=19% Similarity=0.199 Sum_probs=97.4
Q ss_pred eeecCccccc---ccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCc
Q 012479 93 IVRGGRDLFN---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL 169 (462)
Q Consensus 93 ~~~~~~~~f~---~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~ 169 (462)
-+|.|+|... .....+.| |||||||+|+||.++|+.|+.. |++|+++++...+ ..++.. .
T Consensus 151 ~~~~g~W~~~~~~~~~~~l~g-ktiGIIGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~------~~~~~~----~ 213 (340)
T 4dgs_A 151 LVREGRWAAGEQLPLGHSPKG-KRIGVLGLGQIGRALASRAEAF------GMSVRYWNRSTLS------GVDWIA----H 213 (340)
T ss_dssp HHHTTCC------CCCCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSCCT------TSCCEE----C
T ss_pred HHhcCCcccccCcCccccccC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCccc------ccCcee----c
Confidence 4577889653 12378999 9999999999999999999988 9998777665332 234443 5
Q ss_pred CCHhhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEec-cchH------HHhhhccccCCCCccEEecccCCC
Q 012479 170 GDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFLL------GHLQSMGLDFPKNIGVIAVCPKGM 240 (462)
Q Consensus 170 ~~~~eav~~ADvViLavpd~a~-~~vl-~eI~~~Lk~gaiL~~a~-G~~i------~~~~~~~i~~p~~v~VV~v~Pngp 240 (462)
.+.+|++++||+|++++|.... ..++ +++.+.||+|++|+.++ |-.+ ..+.+.. ......||..-.|..+
T Consensus 214 ~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~-i~gA~LDVf~~EP~~~ 292 (340)
T 4dgs_A 214 QSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGT-IAGAGLDVFVNEPAIR 292 (340)
T ss_dssp SSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC--------------CC-SSEEEESCCSSSSSCC
T ss_pred CCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCC-ceEEEeCCcCCCCCCc
Confidence 6899999999999999996544 4566 47888999999988665 3211 1111111 1122467777777433
Q ss_pred chhhHHhhhcCccccCCCceEEEeecc-CCCHHHHHHH
Q 012479 241 GPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNVA 277 (462)
Q Consensus 241 g~~vr~lf~~G~~~~G~Gv~aliav~q-d~tgea~e~a 277 (462)
. .++.- -+.+++||- ..|.++.+.+
T Consensus 293 -~---~L~~~--------~nvilTPHia~~t~e~~~~~ 318 (340)
T 4dgs_A 293 -S---EFHTT--------PNTVLMPHQGSATVETRMAM 318 (340)
T ss_dssp -S---HHHHS--------SSEEECSSCSSCCHHHHHHH
T ss_pred -c---chhhC--------CCEEEcCcCCcCCHHHHHHH
Confidence 2 35552 578899987 4555554443
No 79
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.15 E-value=4.4e-11 Score=119.07 Aligned_cols=151 Identities=15% Similarity=0.106 Sum_probs=104.3
Q ss_pred eecCcccccccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHh
Q 012479 94 VRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY 173 (462)
Q Consensus 94 ~~~~~~~f~~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~ 173 (462)
+|+|+|.+... ..+.| +||||||+|+||.++|+.|+.. |++|+++++...+. ..+.. ..+.+
T Consensus 107 ~~~g~w~~~~~-~~l~g-~tvGIIGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~~------~~~~~----~~~l~ 168 (290)
T 3gvx_A 107 MKAGIFRQSPT-TLLYG-KALGILGYGGIGRRVAHLAKAF------GMRVIAYTRSSVDQ------NVDVI----SESPA 168 (290)
T ss_dssp HHTTCCCCCCC-CCCTT-CEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSCCCT------TCSEE----CSSHH
T ss_pred hhhcccccCCc-eeeec-chheeeccCchhHHHHHHHHhh------CcEEEEEecccccc------ccccc----cCChH
Confidence 57788976544 67999 9999999999999999999998 99988776653321 11332 45899
Q ss_pred hhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEec-cch------HHHhhhccccCCCCccEEecccCCCchhh
Q 012479 174 ETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGPSV 244 (462)
Q Consensus 174 eav~~ADvViLavpd~a~-~~vl-~eI~~~Lk~gaiL~~a~-G~~------i~~~~~~~i~~p~~v~VV~v~Pngpg~~v 244 (462)
|++++||+|++++|.... ..++ ++..+.||+|++|+.++ |-. +..+++..+ .....||+...|. +
T Consensus 169 ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i-~ga~lDV~~~EP~---~-- 242 (290)
T 3gvx_A 169 DLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSD-VWYLSDVWWNEPE---I-- 242 (290)
T ss_dssp HHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTT-CEEEESCCTTTTS---C--
T ss_pred HHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccc-eEEeeccccCCcc---c--
Confidence 999999999999996443 4555 46889999999998776 321 122222111 1235678877775 1
Q ss_pred HHhhhcCccccCCCceEEEeecc--CCCHHHHHHH
Q 012479 245 RRLYVQGKEINGAGINSSFAVHQ--DVDGRATNVA 277 (462)
Q Consensus 245 r~lf~~G~~~~G~Gv~aliav~q--d~tgea~e~a 277 (462)
.+|. --+++++||- ..+.++.+.+
T Consensus 243 -pL~~--------~~nvilTPHiag~~t~e~~~~~ 268 (290)
T 3gvx_A 243 -TETN--------LRNAILSPHVAGGMSGEIMDIA 268 (290)
T ss_dssp -CSCC--------CSSEEECCSCSSCBTTBCCHHH
T ss_pred -chhh--------hhhhhcCccccCCccchHHHHH
Confidence 2332 4678899994 3455544443
No 80
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=99.14 E-value=6.4e-11 Score=122.60 Aligned_cols=159 Identities=14% Similarity=-0.002 Sum_probs=108.1
Q ss_pred eeecCcccccc---cccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCc
Q 012479 93 IVRGGRDLFNL---LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL 169 (462)
Q Consensus 93 ~~~~~~~~f~~---~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~ 169 (462)
.+|+|+|.... ....+.| ++|||||+|+||.++|+.|+.. |.+|+++++.. ...+.+.+.|+.. .
T Consensus 171 ~~~~g~W~~~~~~~~~~~l~g-ktvGIIGlG~IG~~vA~~l~a~------G~~V~~~d~~~-~~~~~~~~~G~~~----~ 238 (393)
T 2nac_A 171 WARKGGWNIADCVSHAYDLEA-MHVGTVAAGRIGLAVLRRLAPF------DVHLHYTDRHR-LPESVEKELNLTW----H 238 (393)
T ss_dssp HHHTTCCCHHHHHTTCCCCTT-CEEEEECCSHHHHHHHHHHGGG------TCEEEEECSSC-CCHHHHHHHTCEE----C
T ss_pred HHHcCCCCccccccCCccCCC-CEEEEEeECHHHHHHHHHHHhC------CCEEEEEcCCc-cchhhHhhcCcee----c
Confidence 46788996421 1257899 9999999999999999999988 99887666543 2345666678764 4
Q ss_pred CCHhhhhccCCeEEEeecch-hHHHHH-HHHHhcCCCCcEEEEeccchH-------HHhhhccccCCCCccEEecccCCC
Q 012479 170 GDIYETISGSDLVLLLISDA-AQADNY-EKIFSCMKPNSILGLSHGFLL-------GHLQSMGLDFPKNIGVIAVCPKGM 240 (462)
Q Consensus 170 ~~~~eav~~ADvViLavpd~-a~~~vl-~eI~~~Lk~gaiL~~a~G~~i-------~~~~~~~i~~p~~v~VV~v~Pngp 240 (462)
.+.++++++||+|++++|.. ....++ ++..+.||+|++|+.++--.+ ..+.+..+ .....||+..+|.-+
T Consensus 239 ~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i-~gA~lDV~~~EP~~~ 317 (393)
T 2nac_A 239 ATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRL-AGYAGDVWFPQPAPK 317 (393)
T ss_dssp SSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSE-EEEEESCCSSSSCCT
T ss_pred CCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCe-eEEEEEecCCCCCCC
Confidence 57899999999999999965 335566 467889999998886653221 12222111 123467787778544
Q ss_pred chhhHHhhhcCccccCCCceEEEeecc-CCCHHHHH
Q 012479 241 GPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATN 275 (462)
Q Consensus 241 g~~vr~lf~~G~~~~G~Gv~aliav~q-d~tgea~e 275 (462)
.+. +|. --+++++||. ..+.++.+
T Consensus 318 ~~p---L~~--------~~nvilTPHia~~T~e~~~ 342 (393)
T 2nac_A 318 DHP---WRT--------MPYNGMTPHISGTTLTAQA 342 (393)
T ss_dssp TCG---GGT--------STTBCCCCSCTTCSHHHHH
T ss_pred CCh---hHc--------CCCEEECCCCCcCcHHHHH
Confidence 333 443 3567788887 44555443
No 81
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=99.13 E-value=1.5e-10 Score=115.69 Aligned_cols=153 Identities=10% Similarity=0.016 Sum_probs=102.8
Q ss_pred eecCcccccccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHh
Q 012479 94 VRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY 173 (462)
Q Consensus 94 ~~~~~~~f~~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~ 173 (462)
+|.|+|........+.| ++|||||+|+||.++|++|+.. |++|+++++... + .+... ..+.+
T Consensus 108 ~~~g~w~~~~~~~~l~g-~~vgIIG~G~IG~~~A~~l~~~------G~~V~~~dr~~~---~----~~~~~----~~~l~ 169 (303)
T 1qp8_A 108 MKRGDYGRDVEIPLIQG-EKVAVLGLGEIGTRVGKILAAL------GAQVRGFSRTPK---E----GPWRF----TNSLE 169 (303)
T ss_dssp HHTTCCCCCSCCCCCTT-CEEEEESCSTHHHHHHHHHHHT------TCEEEEECSSCC---C----SSSCC----BSCSH
T ss_pred HHcCCCCCCCCCCCCCC-CEEEEEccCHHHHHHHHHHHHC------CCEEEEECCCcc---c----cCccc----CCCHH
Confidence 46788964323347999 9999999999999999999988 999877665432 1 13332 45788
Q ss_pred hhhccCCeEEEeecchh-HHHHHH-HHHhcCCCCcEEEEeccchH-------HHhhhccccCCCCccEEecccCCCchhh
Q 012479 174 ETISGSDLVLLLISDAA-QADNYE-KIFSCMKPNSILGLSHGFLL-------GHLQSMGLDFPKNIGVIAVCPKGMGPSV 244 (462)
Q Consensus 174 eav~~ADvViLavpd~a-~~~vl~-eI~~~Lk~gaiL~~a~G~~i-------~~~~~~~i~~p~~v~VV~v~Pngpg~~v 244 (462)
+++++||+|++++|... ...++. ++.+.||+|++|+.++--.+ ..+.+..+ .....+|.. ...|.+..
T Consensus 170 ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i-~gA~lDv~~--~~ep~~~~ 246 (303)
T 1qp8_A 170 EALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQ-FIFASDVWW--GRNDFAKD 246 (303)
T ss_dssp HHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTT-CEEEESCCT--TTTCCGGG
T ss_pred HHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCc-eEEEeccCC--CCCCCCCC
Confidence 99999999999999875 456665 68899999999987764322 11222111 111233330 33444444
Q ss_pred HHhhhcCccccCCCceEEEeeccCC---CHHHHH
Q 012479 245 RRLYVQGKEINGAGINSSFAVHQDV---DGRATN 275 (462)
Q Consensus 245 r~lf~~G~~~~G~Gv~aliav~qd~---tgea~e 275 (462)
..+|. .-+++++||... +.+..+
T Consensus 247 ~~L~~--------~~nviltPH~~~~~~t~e~~~ 272 (303)
T 1qp8_A 247 AEFFS--------LPNVVATPWVAGGYGNERVWR 272 (303)
T ss_dssp HHHHT--------STTEEECCSCSSSSSCHHHHH
T ss_pred Chhhc--------CCCEEECCCcCCCCCCHHHHH
Confidence 55676 368899999753 566543
No 82
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=99.13 E-value=1.4e-10 Score=116.12 Aligned_cols=154 Identities=21% Similarity=0.159 Sum_probs=103.7
Q ss_pred eeecCcccc-c---ccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCC
Q 012479 93 IVRGGRDLF-N---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGT 168 (462)
Q Consensus 93 ~~~~~~~~f-~---~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~ 168 (462)
-+|+|+|.. . .....+.| ++|||||+|+||.++|++|+.. |.+|+++++...+.. +.
T Consensus 123 ~~~~g~w~~~~~~~~~~~~l~g-~~vgIIG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~~-------~~----- 183 (311)
T 2cuk_A 123 YARDGLWKAWHPELLLGLDLQG-LTLGLVGMGRIGQAVAKRALAF------GMRVVYHARTPKPLP-------YP----- 183 (311)
T ss_dssp HHHTTCCCCCCTTTTCBCCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCSSS-------SC-----
T ss_pred HHHcCCCCccccccccCcCCCC-CEEEEEEECHHHHHHHHHHHHC------CCEEEEECCCCcccc-------cc-----
Confidence 357788852 1 12357899 9999999999999999999988 999877666543321 22
Q ss_pred cCCHhhhhccCCeEEEeecchh-HHHHHH-HHHhcCCCCcEEEEeccchHH---Hhhh--ccccCCCCccEEecccCCCc
Q 012479 169 LGDIYETISGSDLVLLLISDAA-QADNYE-KIFSCMKPNSILGLSHGFLLG---HLQS--MGLDFPKNIGVIAVCPKGMG 241 (462)
Q Consensus 169 ~~~~~eav~~ADvViLavpd~a-~~~vl~-eI~~~Lk~gaiL~~a~G~~i~---~~~~--~~i~~p~~v~VV~v~Pngpg 241 (462)
..+.++++++||+|++++|+.. ...++. +..+.||+|++|+.++.-.+. .+.+ .+.......+|+..+|..+.
T Consensus 184 ~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~g~i~ga~lDv~~~eP~~~~ 263 (311)
T 2cuk_A 184 FLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALRGHLFGAGLDVTDPEPLPPG 263 (311)
T ss_dssp BCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHTTTSSEEEESSCSSSSCCTT
T ss_pred cCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHhCcCCEEEEeeCCCCCCCCC
Confidence 4578899999999999999875 456664 677899999998876643221 1111 01111124677777774332
Q ss_pred hhhHHhhhcCccccCCCceEEEeeccC-CCHHHHHH
Q 012479 242 PSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNV 276 (462)
Q Consensus 242 ~~vr~lf~~G~~~~G~Gv~aliav~qd-~tgea~e~ 276 (462)
..+|. .-+++++||.. .|.+..+.
T Consensus 264 ---~~L~~--------~~nviltPh~~~~t~~~~~~ 288 (311)
T 2cuk_A 264 ---HPLYA--------LPNAVITPHIGSAGRTTRER 288 (311)
T ss_dssp ---SGGGG--------CTTEEECCSCTTCBHHHHHH
T ss_pred ---Chhhh--------CCCEEECCcCCCCCHHHHHH
Confidence 24565 46889999974 44554433
No 83
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.13 E-value=1.3e-10 Score=117.38 Aligned_cols=155 Identities=21% Similarity=0.214 Sum_probs=103.3
Q ss_pred eeecCccc-----cc---ccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCcee
Q 012479 93 IVRGGRDL-----FN---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE 164 (462)
Q Consensus 93 ~~~~~~~~-----f~---~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~ 164 (462)
-+|.|+|. +. .....+.| ++|||||+|.||.++|+.|+.. |++|+++++...+ +.+.+.|+.
T Consensus 125 ~~~~~~w~~~~~~~~~~~~~~~~l~g-~~vgIIG~G~iG~~iA~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~- 194 (334)
T 2dbq_A 125 FVRSGEWKKRGVAWHPKWFLGYDVYG-KTIGIIGLGRIGQAIAKRAKGF------NMRILYYSRTRKE--EVERELNAE- 194 (334)
T ss_dssp HHHTSHHHHTTCCCCTTTTCCCCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCH--HHHHHHCCE-
T ss_pred HHHcCCCcccccccccccccccCCCC-CEEEEEccCHHHHHHHHHHHhC------CCEEEEECCCcch--hhHhhcCcc-
Confidence 35667785 11 11357899 9999999999999999999988 9998776665433 455566775
Q ss_pred cCCCcCCHhhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEec-cchH------HHhhhccccCCCCccEEec
Q 012479 165 ENGTLGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFLL------GHLQSMGLDFPKNIGVIAV 235 (462)
Q Consensus 165 ~d~~~~~~~eav~~ADvViLavpd~a~-~~vl-~eI~~~Lk~gaiL~~a~-G~~i------~~~~~~~i~~p~~v~VV~v 235 (462)
..+.++++++||+|++++|+... ..++ +++.+.|++|++|+.++ |..+ ..+....+. ....+|...
T Consensus 195 ----~~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~-ga~lDv~~~ 269 (334)
T 2dbq_A 195 ----FKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIA-GAGLDVFEE 269 (334)
T ss_dssp ----ECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSS-EEEESCCSS
T ss_pred ----cCCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCee-EEEecCCCC
Confidence 35788999999999999998774 4566 46788999999887654 4211 112221111 122455555
Q ss_pred ccCCCchhhHHhhhcCccccCCCceEEEeeccC-CCHHHH
Q 012479 236 CPKGMGPSVRRLYVQGKEINGAGINSSFAVHQD-VDGRAT 274 (462)
Q Consensus 236 ~Pngpg~~vr~lf~~G~~~~G~Gv~aliav~qd-~tgea~ 274 (462)
.| | ....+|. .-+.+++||.. .+.+..
T Consensus 270 EP--~--~~~~L~~--------~~~vi~tPh~~~~t~~~~ 297 (334)
T 2dbq_A 270 EP--Y--YNEELFK--------LDNVVLTPHIGSASFGAR 297 (334)
T ss_dssp SS--C--CCHHHHH--------CTTEEECSSCTTCSHHHH
T ss_pred CC--C--CCchhhc--------CCCEEECCccCCCcHHHH
Confidence 55 2 2234565 36788999873 344443
No 84
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.13 E-value=5.9e-11 Score=120.16 Aligned_cols=155 Identities=21% Similarity=0.261 Sum_probs=104.5
Q ss_pred ceeecCcccccc--cccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCc
Q 012479 92 YIVRGGRDLFNL--LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL 169 (462)
Q Consensus 92 ~~~~~~~~~f~~--~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~ 169 (462)
.-+|.|+|.... ....+.| ++|||||+|+||.++|+.|+.. |.+|+++++...+. .|+.. .
T Consensus 144 ~~~~~g~w~~~~~~~~~~l~g-~~vgIIG~G~iG~~vA~~l~~~------G~~V~~~dr~~~~~------~g~~~----~ 206 (333)
T 3ba1_A 144 KYVRRGAWKFGDFKLTTKFSG-KRVGIIGLGRIGLAVAERAEAF------DCPISYFSRSKKPN------TNYTY----Y 206 (333)
T ss_dssp HHHHTTGGGGCCCCCCCCCTT-CCEEEECCSHHHHHHHHHHHTT------TCCEEEECSSCCTT------CCSEE----E
T ss_pred HHHHcCCCCccccccccccCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEECCCchhc------cCcee----c
Confidence 345778896421 1367999 9999999999999999999988 88887776653321 25553 4
Q ss_pred CCHhhhhccCCeEEEeecchh-HHHHH-HHHHhcCCCCcEEEEec-cchH------HHhhhccccCCCCccEEecccCCC
Q 012479 170 GDIYETISGSDLVLLLISDAA-QADNY-EKIFSCMKPNSILGLSH-GFLL------GHLQSMGLDFPKNIGVIAVCPKGM 240 (462)
Q Consensus 170 ~~~~eav~~ADvViLavpd~a-~~~vl-~eI~~~Lk~gaiL~~a~-G~~i------~~~~~~~i~~p~~v~VV~v~Pngp 240 (462)
.+.++++++||+|++++|+.. ...++ +++.+.||+|++|+.++ |..+ ..+.+..+. ....+|+..+|. |
T Consensus 207 ~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~-ga~lDv~~~EP~-~ 284 (333)
T 3ba1_A 207 GSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLG-GAGLDVFEREPE-V 284 (333)
T ss_dssp SCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSC-EEEESCCTTTTC-C
T ss_pred CCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCe-EEEEecCCCCCC-C
Confidence 688999999999999999864 45666 46778899999887655 4321 112221111 124578877884 3
Q ss_pred chhhHHhhhcCccccCCCceEEEeecc-CCCHHHHHH
Q 012479 241 GPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNV 276 (462)
Q Consensus 241 g~~vr~lf~~G~~~~G~Gv~aliav~q-d~tgea~e~ 276 (462)
. ..+|. ..+++++||. ..+.++.+.
T Consensus 285 ~---~~L~~--------~~nviltPH~~~~t~e~~~~ 310 (333)
T 3ba1_A 285 P---EKLFG--------LENVVLLPHVGSGTVETRKV 310 (333)
T ss_dssp C---GGGGG--------CTTEEECSSCTTCSHHHHHH
T ss_pred c---chhhc--------CCCEEECCcCCCCCHHHHHH
Confidence 2 23554 3688899887 345554433
No 85
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.13 E-value=2e-10 Score=108.26 Aligned_cols=148 Identities=18% Similarity=0.156 Sum_probs=99.1
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecchhH
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~a~ 191 (462)
+||+|||+|.||.+++.+|.+. |++|++.+|+. +..+...+.|+.. .+..++++++|+||+++|+...
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~------g~~V~~~~r~~-~~~~~~~~~g~~~-----~~~~~~~~~~DvVi~av~~~~~ 96 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGS------GFKVVVGSRNP-KRTARLFPSAAQV-----TFQEEAVSSPEVIFVAVFREHY 96 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEESSH-HHHHHHSBTTSEE-----EEHHHHTTSCSEEEECSCGGGS
T ss_pred CEEEEEccCHHHHHHHHHHHHC------CCEEEEEeCCH-HHHHHHHHcCCce-----ecHHHHHhCCCEEEECCChHHH
Confidence 7899999999999999999998 88887776653 3344444446663 3788899999999999999876
Q ss_pred HHHHHHHHhcCCCCcEEE-EeccchHHHh----------hhccccCCCCccEEecccCCC-chhhHHhhhcCccccCCCc
Q 012479 192 ADNYEKIFSCMKPNSILG-LSHGFLLGHL----------QSMGLDFPKNIGVIAVCPKGM-GPSVRRLYVQGKEINGAGI 259 (462)
Q Consensus 192 ~~vl~eI~~~Lk~gaiL~-~a~G~~i~~~----------~~~~i~~p~~v~VV~v~Pngp-g~~vr~lf~~G~~~~G~Gv 259 (462)
.++++ +.+.+ ++++|+ .+.|..+..+ .+ .+| +.+|++.+ |.. ++........ |-
T Consensus 97 ~~v~~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~---~l~-~~~vv~~~-n~~~~~~~~~~~~~-------g~ 162 (215)
T 2vns_A 97 SSLCS-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLAS---LFP-TCTVVKAF-NVISAWTLQAGPRD-------GN 162 (215)
T ss_dssp GGGGG-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHH---HCT-TSEEEEEC-TTBCHHHHHTCSCS-------SC
T ss_pred HHHHH-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHH---HCC-CCeEEecc-ccccHhHhcccccC-------Cc
Confidence 67775 66666 777765 5566654322 12 234 35788876 432 2221111111 22
Q ss_pred eEEEeeccCCCHHHHHHHHHHHHHhCCC
Q 012479 260 NSSFAVHQDVDGRATNVALGWSVALGSP 287 (462)
Q Consensus 260 ~aliav~qd~tgea~e~a~al~~aiG~~ 287 (462)
+.++... .+.++.+.+..+++.+|..
T Consensus 163 ~~~~~~g--~~~~~~~~v~~ll~~~G~~ 188 (215)
T 2vns_A 163 RQVPICG--DQPEAKRAVSEMALAMGFM 188 (215)
T ss_dssp CEEEEEE--SCHHHHHHHHHHHHHTTCE
T ss_pred eeEEEec--CCHHHHHHHHHHHHHcCCc
Confidence 2222223 3688999999999999974
No 86
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.12 E-value=1.3e-09 Score=114.22 Aligned_cols=200 Identities=13% Similarity=0.106 Sum_probs=123.9
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHH-------------------cC-ceecCCCcCC
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-------------------AG-FTEENGTLGD 171 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~-------------------~G-~~~~d~~~~~ 171 (462)
|||+|||+|.||.++|.+|.+. |++|+++++. .+..+...+ .| +.. +.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~------G~~V~~~D~~-~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~----t~d 71 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL------GANVRCIDTD-RNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF----GTE 71 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE----ESC
T ss_pred CEEEEECcCHHHHHHHHHHHhc------CCEEEEEECC-HHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE----ECC
Confidence 6999999999999999999999 9998766554 333333332 12 222 467
Q ss_pred HhhhhccCCeEEEeecch----------hHHHHHHHHHhcCCCCcEEEEeccchHH---H----hhhccccCC--CCccE
Q 012479 172 IYETISGSDLVLLLISDA----------AQADNYEKIFSCMKPNSILGLSHGFLLG---H----LQSMGLDFP--KNIGV 232 (462)
Q Consensus 172 ~~eav~~ADvViLavpd~----------a~~~vl~eI~~~Lk~gaiL~~a~G~~i~---~----~~~~~i~~p--~~v~V 232 (462)
.++++++||+||+++|.. ...+++++|.+++++|++|++.+.+... . +.+...... .++ .
T Consensus 72 ~~ea~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~~~~~~~~d~-~ 150 (450)
T 3gg2_A 72 IEQAVPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELDKREVLIDF-D 150 (450)
T ss_dssp HHHHGGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCE-E
T ss_pred HHHHHhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhccccCcCcce-e
Confidence 888999999999999977 6788999999999999998887765211 1 111000011 222 3
Q ss_pred EecccCC--CchhhHHhhhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCC--cccccchhhhccccchhhhHh
Q 012479 233 IAVCPKG--MGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP--FTFATTLEQEYRSDIFGERGI 308 (462)
Q Consensus 233 V~v~Png--pg~~vr~lf~~G~~~~G~Gv~aliav~qd~tgea~e~a~al~~aiG~~--~viettf~~E~~~dlfgeqtv 308 (462)
+...|.. +|..+.+... .+.++ +.. .+.++.+.+..+++.++.. .++.++. ...+.-.+.+.+
T Consensus 151 v~~~Pe~a~eG~~~~~~~~---------p~~iv-vG~-~~~~~~~~~~~l~~~~~~~~~~~~~~d~-~~aE~~Kl~~N~- 217 (450)
T 3gg2_A 151 IASNPEFLKEGNAIDDFMK---------PDRVV-VGV-DSDRARELITSLYKPMLLNNFRVLFMDI-ASAEMTKYAANA- 217 (450)
T ss_dssp EEECCCCCCTTSHHHHHHS---------CSCEE-EEE-SSHHHHHHHHHHHTTTCCSCCCEEEECH-HHHHHHHHHHHH-
T ss_pred EEechhhhcccchhhhccC---------CCEEE-EEc-CCHHHHHHHHHHHHHHhcCCCeEEecCH-HHHHHHHHHHHH-
Confidence 4455652 2333222222 22222 222 2578999999999999862 2222222 222222333333
Q ss_pred HHhHHHHHHHHHHHHHHHcCCCHHHHHH
Q 012479 309 LLGAVHGIVESLFRRFTENGMNEDLAYK 336 (462)
Q Consensus 309 L~G~~paliea~~d~~v~~G~~~e~A~~ 336 (462)
+....-+++.-+...+.+.|+++++.+.
T Consensus 218 ~~a~~ia~~nE~~~l~~~~Gid~~~v~~ 245 (450)
T 3gg2_A 218 MLATRISFMNDVANLCERVGADVSMVRL 245 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 2233445777777778888999876655
No 87
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=99.11 E-value=2e-10 Score=116.01 Aligned_cols=160 Identities=19% Similarity=0.270 Sum_probs=106.9
Q ss_pred eeecCccc-c--cccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCc
Q 012479 93 IVRGGRDL-F--NLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL 169 (462)
Q Consensus 93 ~~~~~~~~-f--~~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~ 169 (462)
-+|.|+|. + ......+.| +||||||+|+||.++|+.|+.. |++|+++++.. ...+.+.+.|+. .
T Consensus 125 ~~~~g~w~~~~~~~~~~~l~g-~tvGIIG~G~IG~~vA~~l~~~------G~~V~~~d~~~-~~~~~~~~~g~~-----~ 191 (330)
T 4e5n_A 125 FVRSGKFRGWQPRFYGTGLDN-ATVGFLGMGAIGLAMADRLQGW------GATLQYHEAKA-LDTQTEQRLGLR-----Q 191 (330)
T ss_dssp HHHTTCCCSCCSCCCCCCSTT-CEEEEECCSHHHHHHHHHTTTS------CCEEEEECSSC-CCHHHHHHHTEE-----E
T ss_pred HHHhCCccccCccccCCccCC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEECCCC-CcHhHHHhcCce-----e
Confidence 35677775 2 122367899 9999999999999999999987 99987666543 234556667876 3
Q ss_pred CCHhhhhccCCeEEEeecchh-HHHHHH-HHHhcCCCCcEEEEec-cch------HHHhhhccccCCCCccEEecc----
Q 012479 170 GDIYETISGSDLVLLLISDAA-QADNYE-KIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVC---- 236 (462)
Q Consensus 170 ~~~~eav~~ADvViLavpd~a-~~~vl~-eI~~~Lk~gaiL~~a~-G~~------i~~~~~~~i~~p~~v~VV~v~---- 236 (462)
.+.++++++||+|++++|... ...++. +..+.||+|++|+.++ |-. +..+++..+. ....||....
T Consensus 192 ~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~-gA~lDV~~~E~~~~ 270 (330)
T 4e5n_A 192 VACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLG-GYAADVFEMEDWAR 270 (330)
T ss_dssp CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE-EEEESCCGGGCTTC
T ss_pred CCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCcc-EEEecccccccccc
Confidence 589999999999999999654 344554 7889999999998776 321 1222221111 2245666666
Q ss_pred ---cCCCchhhHHhhhcCccccCCCceEEEeecc-CCCHHHHHHH
Q 012479 237 ---PKGMGPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNVA 277 (462)
Q Consensus 237 ---Pngpg~~vr~lf~~G~~~~G~Gv~aliav~q-d~tgea~e~a 277 (462)
|--+.+ .++.. -+.+++||- ..|.++.+.+
T Consensus 271 ~~~Pl~~~~---~L~~~--------~nvilTPHia~~t~e~~~~~ 304 (330)
T 4e5n_A 271 ADRPQQIDP---ALLAH--------PNTLFTPHIGSAVRAVRLEI 304 (330)
T ss_dssp TTCCSSCCH---HHHTC--------SSEEECSSCTTCCHHHHHHH
T ss_pred cCCCCCCCc---hHHcC--------CCEEECCcCCCChHHHHHHH
Confidence 532222 34442 478899987 4555554443
No 88
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=99.10 E-value=1e-10 Score=119.10 Aligned_cols=157 Identities=18% Similarity=0.117 Sum_probs=105.3
Q ss_pred eecCcccccc--------cccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceec
Q 012479 94 VRGGRDLFNL--------LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE 165 (462)
Q Consensus 94 ~~~~~~~f~~--------~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~ 165 (462)
+|.|+|.... ....+.| ++|||||+|.||.++|+.|+.. |.+|+++++...+ ..+.+.|+..
T Consensus 144 ~~~g~w~~~~~~~~~~~~~~~~l~g-~tvGIIG~G~IG~~vA~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~~- 213 (347)
T 1mx3_A 144 LREGTRVQSVEQIREVASGAARIRG-ETLGIIGLGRVGQAVALRAKAF------GFNVLFYDPYLSD--GVERALGLQR- 213 (347)
T ss_dssp HHTTCCCCSHHHHHHHTTTCCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECTTSCT--THHHHHTCEE-
T ss_pred HHcCCcccccccccccccCccCCCC-CEEEEEeECHHHHHHHHHHHHC------CCEEEEECCCcch--hhHhhcCCee-
Confidence 5677884321 1247899 9999999999999999999988 9998877665433 2345567753
Q ss_pred CCCcCCHhhhhccCCeEEEeecchh-HHHHH-HHHHhcCCCCcEEEEeccch-------HHHhhhccccCCCCccEEecc
Q 012479 166 NGTLGDIYETISGSDLVLLLISDAA-QADNY-EKIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFPKNIGVIAVC 236 (462)
Q Consensus 166 d~~~~~~~eav~~ADvViLavpd~a-~~~vl-~eI~~~Lk~gaiL~~a~G~~-------i~~~~~~~i~~p~~v~VV~v~ 236 (462)
+.+.+|++++||+|++++|+.. ...++ ++..+.||+|++|+.++--. ...+.+..+. ....+|+...
T Consensus 214 ---~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~-gA~lDV~~~E 289 (347)
T 1mx3_A 214 ---VSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIR-GAALDVHESE 289 (347)
T ss_dssp ---CSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEE-EEEESCCSSS
T ss_pred ---cCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCc-EEEEeecccC
Confidence 4588999999999999999864 45566 46788999999888665321 1122221111 2346788888
Q ss_pred cCCC-chhhHHhhhcCccccCCCceEEEeeccC-CCHHHHH
Q 012479 237 PKGM-GPSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATN 275 (462)
Q Consensus 237 Pngp-g~~vr~lf~~G~~~~G~Gv~aliav~qd-~tgea~e 275 (462)
|..+ .+. ++. --+.+++||-. .+.+..+
T Consensus 290 P~~~~~~~---L~~--------~~nvi~tPHia~~t~~~~~ 319 (347)
T 1mx3_A 290 PFSFSQGP---LKD--------APNLICTPHAAWYSEQASI 319 (347)
T ss_dssp SCCTTSST---TTT--------CSSEEECSSCTTCCHHHHH
T ss_pred CCCCCCch---HHh--------CCCEEEEchHHHHHHHHHH
Confidence 8431 222 222 35788898874 4444443
No 89
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=99.09 E-value=4.6e-10 Score=115.14 Aligned_cols=157 Identities=15% Similarity=0.153 Sum_probs=107.0
Q ss_pred eeecCccc--cc--ccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCC
Q 012479 93 IVRGGRDL--FN--LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGT 168 (462)
Q Consensus 93 ~~~~~~~~--f~--~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~ 168 (462)
-+|+|+|. .. .....+.| +||||||+|.||.++|+.|+.. |.+|+++++.. ..+.+.+.|+.
T Consensus 155 ~~r~g~~~w~~~~~~~~~~l~g-ktvGIIGlG~IG~~vA~~l~~f------G~~V~~~d~~~--~~~~~~~~g~~----- 220 (365)
T 4hy3_A 155 AFQEGTELWGGEGNASARLIAG-SEIGIVGFGDLGKALRRVLSGF------RARIRVFDPWL--PRSMLEENGVE----- 220 (365)
T ss_dssp HHHHTCCCCSSSSTTSCCCSSS-SEEEEECCSHHHHHHHHHHTTS------CCEEEEECSSS--CHHHHHHTTCE-----
T ss_pred HHHcCCccccccccccccccCC-CEEEEecCCcccHHHHHhhhhC------CCEEEEECCCC--CHHHHhhcCee-----
Confidence 35667743 21 23477999 9999999999999999999887 99987766542 34556677887
Q ss_pred cCCHhhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEec-cc------hHHHhhhccccCCCCccEEecccCC
Q 012479 169 LGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GF------LLGHLQSMGLDFPKNIGVIAVCPKG 239 (462)
Q Consensus 169 ~~~~~eav~~ADvViLavpd~a~-~~vl-~eI~~~Lk~gaiL~~a~-G~------~i~~~~~~~i~~p~~v~VV~v~Png 239 (462)
..+.+|++++||+|++++|.... ..++ .+.+..||+|++|+.++ |- .+..+++..+. ...||..-.|--
T Consensus 221 ~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~--aaLDV~~~EPl~ 298 (365)
T 4hy3_A 221 PASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV--AASDVYPEEPLP 298 (365)
T ss_dssp ECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE--EEESCCSSSSCC
T ss_pred eCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce--EEeeCCCCCCCC
Confidence 45899999999999999996644 4556 46888999999998776 32 12233333332 346676666643
Q ss_pred CchhhHHhhhcCccccCCCceEEEeecc-CCCHHHHHH
Q 012479 240 MGPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNV 276 (462)
Q Consensus 240 pg~~vr~lf~~G~~~~G~Gv~aliav~q-d~tgea~e~ 276 (462)
+.+. ++. --+++++||- ..+.++.+.
T Consensus 299 ~~~p---L~~--------~~nvilTPHia~~t~e~~~~ 325 (365)
T 4hy3_A 299 LDHP---VRS--------LKGFIRSAHRAGALDSAFKK 325 (365)
T ss_dssp TTCG---GGT--------CTTEEECCSCSSCCHHHHHH
T ss_pred CCCh---hhc--------CCCEEECCccccCHHHHHHH
Confidence 3332 333 2578899987 456655543
No 90
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=99.07 E-value=1.3e-10 Score=118.58 Aligned_cols=160 Identities=14% Similarity=0.106 Sum_probs=108.6
Q ss_pred eeecCcccccc---cccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCc
Q 012479 93 IVRGGRDLFNL---LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL 169 (462)
Q Consensus 93 ~~~~~~~~f~~---~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~ 169 (462)
-+|.|+|.... ....+.| ++|||||+|+||.++|+.|+.. |++|+++++. ....+.+.+.|+.. +
T Consensus 144 ~~~~g~W~~~~~~~~~~~l~g-ktvGIIG~G~IG~~vA~~l~~~------G~~V~~~dr~-~~~~~~~~~~g~~~----~ 211 (351)
T 3jtm_A 144 QVVKGEWNVAGIAYRAYDLEG-KTIGTVGAGRIGKLLLQRLKPF------GCNLLYHDRL-QMAPELEKETGAKF----V 211 (351)
T ss_dssp HHHTTCCCHHHHHTTCCCSTT-CEEEEECCSHHHHHHHHHHGGG------CCEEEEECSS-CCCHHHHHHHCCEE----C
T ss_pred HHHcCCCccccccCCcccccC-CEEeEEEeCHHHHHHHHHHHHC------CCEEEEeCCC-ccCHHHHHhCCCeE----c
Confidence 35778996432 2357999 9999999999999999999988 9998766654 33456666778864 5
Q ss_pred CCHhhhhccCCeEEEeecch-hHHHHH-HHHHhcCCCCcEEEEec-cch------HHHhhhccccCCCCccEEecccCCC
Q 012479 170 GDIYETISGSDLVLLLISDA-AQADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGM 240 (462)
Q Consensus 170 ~~~~eav~~ADvViLavpd~-a~~~vl-~eI~~~Lk~gaiL~~a~-G~~------i~~~~~~~i~~p~~v~VV~v~Pngp 240 (462)
.+.+|++++||+|++++|.. ....++ ++.++.||+|++|+.++ |-. +..+++..+. ....||..-.|.-+
T Consensus 212 ~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~-ga~lDV~~~EP~~~ 290 (351)
T 3jtm_A 212 EDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHIG-GYSGDVWDPQPAPK 290 (351)
T ss_dssp SCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE-EEEESCCSSSSCCT
T ss_pred CCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhCCcc-EEEeCCCCCCCCCC
Confidence 68999999999999999964 344555 46788899999998776 321 1222221111 23456776667433
Q ss_pred chhhHHhhhcCccccCCCceEEEeecc-CCCHHHHHH
Q 012479 241 GPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNV 276 (462)
Q Consensus 241 g~~vr~lf~~G~~~~G~Gv~aliav~q-d~tgea~e~ 276 (462)
.+. ++. =-+.+++||- ..|.++.+.
T Consensus 291 ~~p---L~~--------~~nvilTPHia~~t~ea~~~ 316 (351)
T 3jtm_A 291 DHP---WRY--------MPNQAMTPHTSGTTIDAQLR 316 (351)
T ss_dssp TCG---GGT--------STTBCCCCSCGGGSHHHHHH
T ss_pred CCh---hhc--------CCCEEECCcCCCCCHHHHHH
Confidence 333 332 1357788884 455555544
No 91
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.07 E-value=2.4e-10 Score=115.09 Aligned_cols=108 Identities=19% Similarity=0.136 Sum_probs=82.1
Q ss_pred eeecCcccc-c---ccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCC
Q 012479 93 IVRGGRDLF-N---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGT 168 (462)
Q Consensus 93 ~~~~~~~~f-~---~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~ 168 (462)
-+|.|+|.. . .....+.| ++|||||+|.||.++|+.|+.. |++|+++++... ..+.+.+.|+..
T Consensus 134 ~~~~~~w~~~~~~~~~~~~l~g-~~vgIIG~G~iG~~iA~~l~~~------G~~V~~~d~~~~-~~~~~~~~g~~~---- 201 (330)
T 2gcg_A 134 EVKNGGWTSWKPLWLCGYGLTQ-STVGIIGLGRIGQAIARRLKPF------GVQRFLYTGRQP-RPEEAAEFQAEF---- 201 (330)
T ss_dssp HHHTTCCCSCCTTSSCBCCCTT-CEEEEECCSHHHHHHHHHHGGG------TCCEEEEESSSC-CHHHHHTTTCEE----
T ss_pred HHHcCCCcccCcccccCcCCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEECCCCc-chhHHHhcCcee----
Confidence 356788853 1 11367899 9999999999999999999988 988877766543 344555667763
Q ss_pred cCCHhhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEecc
Q 012479 169 LGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 169 ~~~~~eav~~ADvViLavpd~a~-~~vl-~eI~~~Lk~gaiL~~a~G 213 (462)
.+.++++++||+|++++|+... ..++ +++.+.|++|++|+.++.
T Consensus 202 -~~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~sr 247 (330)
T 2gcg_A 202 -VSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISR 247 (330)
T ss_dssp -CCHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSC
T ss_pred -CCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence 3888999999999999998654 4555 467788999998876553
No 92
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.07 E-value=4.5e-10 Score=114.08 Aligned_cols=110 Identities=17% Similarity=0.113 Sum_probs=82.9
Q ss_pred eeecCc---ccc-c----ccccccCCCCEEEEEcccchHHHHHHHHH-HhhhhhcCCcEEEEEecCCchhHHHHHHcCce
Q 012479 93 IVRGGR---DLF-N----LLPDAFNGINQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVKVGLRKGSRSFAEARAAGFT 163 (462)
Q Consensus 93 ~~~~~~---~~f-~----~~~~~l~gikkIgIIG~G~mG~AiA~~Lr-ds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~ 163 (462)
.+|.|+ |.. . .....+.| ++|||||+|.||.++|+.|+ .. |++|++.++.. ...+.+.+.|+.
T Consensus 138 ~~~~g~~~~w~~~~~~~~~~~~~l~g-~~vgIIG~G~IG~~vA~~l~~~~------G~~V~~~d~~~-~~~~~~~~~g~~ 209 (348)
T 2w2k_A 138 AARTGDPETFNRVHLEIGKSAHNPRG-HVLGAVGLGAIQKEIARKAVHGL------GMKLVYYDVAP-ADAETEKALGAE 209 (348)
T ss_dssp HHTTCCHHHHHHHHHHHHTTCCCSTT-CEEEEECCSHHHHHHHHHHHHTT------CCEEEEECSSC-CCHHHHHHHTCE
T ss_pred HHHcCCCcccccccccccccCcCCCC-CEEEEEEECHHHHHHHHHHHHhc------CCEEEEECCCC-cchhhHhhcCcE
Confidence 456777 831 1 12367999 99999999999999999999 87 98887666543 334455566776
Q ss_pred ecCCCcCCHhhhhccCCeEEEeecchh-HHHHH-HHHHhcCCCCcEEEEeccc
Q 012479 164 EENGTLGDIYETISGSDLVLLLISDAA-QADNY-EKIFSCMKPNSILGLSHGF 214 (462)
Q Consensus 164 ~~d~~~~~~~eav~~ADvViLavpd~a-~~~vl-~eI~~~Lk~gaiL~~a~G~ 214 (462)
. +.+.++++++||+|++++|+.. ...++ +++.+.|++|++|+.++..
T Consensus 210 ~----~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg 258 (348)
T 2w2k_A 210 R----VDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARG 258 (348)
T ss_dssp E----CSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCG
T ss_pred E----eCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCC
Confidence 4 4478899999999999999865 44565 3677889999988866543
No 93
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=99.06 E-value=1.8e-10 Score=116.65 Aligned_cols=104 Identities=19% Similarity=0.129 Sum_probs=81.3
Q ss_pred eecCccccc--ccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCC
Q 012479 94 VRGGRDLFN--LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD 171 (462)
Q Consensus 94 ~~~~~~~f~--~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~ 171 (462)
+|+|+|.+. .....|.| +||||||+|+||.++|+.|+.. |++|+++++...+.. .+.|+. ..+
T Consensus 123 ~~~g~w~~~~~~~~~~l~g-~tvgIiG~G~IG~~vA~~l~~~------G~~V~~~d~~~~~~~---~~~g~~-----~~~ 187 (334)
T 2pi1_A 123 VKKLNFSQDSEILARELNR-LTLGVIGTGRIGSRVAMYGLAF------GMKVLCYDVVKREDL---KEKGCV-----YTS 187 (334)
T ss_dssp HTTTCCCCCGGGCBCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCHHH---HHTTCE-----ECC
T ss_pred HHcCCCccccCccceeccC-ceEEEECcCHHHHHHHHHHHHC------cCEEEEECCCcchhh---HhcCce-----ecC
Confidence 567888654 23478999 9999999999999999999988 999877766543321 245776 356
Q ss_pred HhhhhccCCeEEEeecchh-HHHHHH-HHHhcCCCCcEEEEec
Q 012479 172 IYETISGSDLVLLLISDAA-QADNYE-KIFSCMKPNSILGLSH 212 (462)
Q Consensus 172 ~~eav~~ADvViLavpd~a-~~~vl~-eI~~~Lk~gaiL~~a~ 212 (462)
.+|++++||+|++++|... ...++. +..+.||+|++|+.++
T Consensus 188 l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~a 230 (334)
T 2pi1_A 188 LDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTA 230 (334)
T ss_dssp HHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECS
T ss_pred HHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECC
Confidence 9999999999999999643 344554 6788999999998776
No 94
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=99.06 E-value=1.9e-10 Score=117.20 Aligned_cols=158 Identities=20% Similarity=0.223 Sum_probs=105.8
Q ss_pred eeecCccccc----ccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCC
Q 012479 93 IVRGGRDLFN----LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGT 168 (462)
Q Consensus 93 ~~~~~~~~f~----~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~ 168 (462)
-+|.|+|... .....+.| ++|||||+|+||.++|+.|+.. |.+|+++++...+ .+.+ .|+..
T Consensus 152 ~~r~g~W~~~~~~~~~g~~l~g-ktvGIIGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~-~~~~--~g~~~---- 217 (345)
T 4g2n_A 152 MVRSGSWPGWGPTQLLGMGLTG-RRLGIFGMGRIGRAIATRARGF------GLAIHYHNRTRLS-HALE--EGAIY---- 217 (345)
T ss_dssp HHHTTCCCCCCTTTTCBCCCTT-CEEEEESCSHHHHHHHHHHHTT------TCEEEEECSSCCC-HHHH--TTCEE----
T ss_pred HHHcCCCcccCcccccccccCC-CEEEEEEeChhHHHHHHHHHHC------CCEEEEECCCCcc-hhhh--cCCeE----
Confidence 3577888631 22478999 9999999999999999999987 9998776665322 2222 26653
Q ss_pred cCCHhhhhccCCeEEEeecchh-HHHHH-HHHHhcCCCCcEEEEec-cch------HHHhhhccccCCCCccEEecccCC
Q 012479 169 LGDIYETISGSDLVLLLISDAA-QADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKG 239 (462)
Q Consensus 169 ~~~~~eav~~ADvViLavpd~a-~~~vl-~eI~~~Lk~gaiL~~a~-G~~------i~~~~~~~i~~p~~v~VV~v~Png 239 (462)
+.+.+|++++||+|++++|... ...++ ++.++.||+|++|+.++ |-. +..+++..+ .....||.--.| .
T Consensus 218 ~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i-~gA~LDVf~~EP-~ 295 (345)
T 4g2n_A 218 HDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLINDDALIEALRSKHL-FAAGLDVFANEP-A 295 (345)
T ss_dssp CSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSE-EEEEESCCTTTT-S
T ss_pred eCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCc-eEEEecCCCCCC-C
Confidence 4589999999999999999644 34555 46788999999998776 321 222332111 123567777777 2
Q ss_pred CchhhHHhhhcCccccCCCceEEEeecc-CCCHHHHHHH
Q 012479 240 MGPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNVA 277 (462)
Q Consensus 240 pg~~vr~lf~~G~~~~G~Gv~aliav~q-d~tgea~e~a 277 (462)
+.+ .++. --+++++||- ..|.++.+.+
T Consensus 296 ~~~---pL~~--------~~nvilTPHia~~t~e~~~~~ 323 (345)
T 4g2n_A 296 IDP---RYRS--------LDNIFLTPHIGSATHETRDAM 323 (345)
T ss_dssp CCT---TGGG--------CTTEEECCSCTTCBHHHHHHH
T ss_pred CCc---hHHh--------CCCEEEcCccCcCCHHHHHHH
Confidence 222 2343 2468899986 3455544433
No 95
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=99.04 E-value=1.8e-10 Score=116.29 Aligned_cols=148 Identities=12% Similarity=0.111 Sum_probs=100.6
Q ss_pred eecCcccccccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHh
Q 012479 94 VRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY 173 (462)
Q Consensus 94 ~~~~~~~f~~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~ 173 (462)
.|+|+|........+.| ++|||||+|+||.++|+.|+.. |++|+++++...+. +.+ ...+. ..+.+
T Consensus 121 ~~~~~W~~~~~~~~l~g-ktvGIiGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~~-~~~-~~~~~-----~~~l~ 186 (324)
T 3evt_A 121 RGARQWALPMTTSTLTG-QQLLIYGTGQIGQSLAAKASAL------GMHVIGVNTTGHPA-DHF-HETVA-----FTATA 186 (324)
T ss_dssp TTTCCSSCSSCCCCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSCCCC-TTC-SEEEE-----GGGCH
T ss_pred HhcCCcccCCCCccccC-CeEEEECcCHHHHHHHHHHHhC------CCEEEEECCCcchh-HhH-hhccc-----cCCHH
Confidence 56789976644578999 9999999999999999999988 99988776653321 111 11111 35788
Q ss_pred hhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEec-cch------HHHhhhccccCCCCccEEecccCCCchhh
Q 012479 174 ETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGPSV 244 (462)
Q Consensus 174 eav~~ADvViLavpd~a~-~~vl-~eI~~~Lk~gaiL~~a~-G~~------i~~~~~~~i~~p~~v~VV~v~Pngpg~~v 244 (462)
|++++||+|++++|.... ..++ ++.+..||+|++|+.++ |-. +..+++..+ .....||....|.-+.+.
T Consensus 187 ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i-~gA~lDV~~~EPl~~~~p- 264 (324)
T 3evt_A 187 DALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQL-SMAALDVTEPEPLPTDHP- 264 (324)
T ss_dssp HHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSC-SEEEESSCSSSSCCTTCG-
T ss_pred HHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCc-eEEEeCCCCCCCCCCCCh-
Confidence 999999999999996543 4555 46888999999998776 321 122222111 123467777777433332
Q ss_pred HHhhhcCccccCCCceEEEeecc
Q 012479 245 RRLYVQGKEINGAGINSSFAVHQ 267 (462)
Q Consensus 245 r~lf~~G~~~~G~Gv~aliav~q 267 (462)
++. --+.+++||-
T Consensus 265 --L~~--------~~nvilTPHi 277 (324)
T 3evt_A 265 --LWQ--------RDDVLITPHI 277 (324)
T ss_dssp --GGG--------CSSEEECCSC
T ss_pred --hhc--------CCCEEEcCcc
Confidence 444 2477899986
No 96
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.04 E-value=2.9e-09 Score=112.32 Aligned_cols=207 Identities=12% Similarity=0.053 Sum_probs=120.0
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHc-------------------CceecCCCcCC
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-------------------GFTEENGTLGD 171 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~-------------------G~~~~d~~~~~ 171 (462)
++||+|||+|.||.++|.+|.+. |.|++|++.++. .+..+...+. ++.. +.+
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~----g~g~~V~~~D~~-~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~----t~~ 79 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHK----CPHITVTVVDMN-TAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFF----SSD 79 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHH----CTTSEEEEECSC-HHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE----ESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhc----CCCCEEEEEECC-HHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEE----ECC
Confidence 37999999999999999999887 224677665543 3333333221 1221 346
Q ss_pred HhhhhccCCeEEEeecch---------------hHHHHHHHHHhcCCCCcEEEEeccchH---HHhhhcccc-CC--CCc
Q 012479 172 IYETISGSDLVLLLISDA---------------AQADNYEKIFSCMKPNSILGLSHGFLL---GHLQSMGLD-FP--KNI 230 (462)
Q Consensus 172 ~~eav~~ADvViLavpd~---------------a~~~vl~eI~~~Lk~gaiL~~a~G~~i---~~~~~~~i~-~p--~~v 230 (462)
..+++++||+||+++|.. ...+++++|.+++++|++|++.+.+.. ..+...... .+ ..+
T Consensus 80 ~~~~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~~~~~~ 159 (481)
T 2o3j_A 80 IPKAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQKNNENL 159 (481)
T ss_dssp HHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC----C
T ss_pred HHHHhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhCcCcCC
Confidence 678899999999998753 256788889999999999888655421 111110000 11 123
Q ss_pred c-EEecccC--CCchhhHHhhhcCccccCCCceEEEeecc-CCCHHHHHHHHHHHHHhCC-Ccccccchhhhccccchhh
Q 012479 231 G-VIAVCPK--GMGPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNVALGWSVALGS-PFTFATTLEQEYRSDIFGE 305 (462)
Q Consensus 231 ~-VV~v~Pn--gpg~~vr~lf~~G~~~~G~Gv~aliav~q-d~tgea~e~a~al~~aiG~-~~viettf~~E~~~dlfge 305 (462)
+ .|..+|. .|+..+.+++.. -..++.... ..+.++.+.+..++..+|. ..++.++. ...+.-.+-+
T Consensus 160 d~~v~~~Pe~~~~G~a~~~~~~~--------~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~-~~ae~~Kl~~ 230 (481)
T 2o3j_A 160 KFQVLSNPEFLAEGTAMKDLANP--------DRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNT-WSSELSKLVA 230 (481)
T ss_dssp CEEEEECCCCCCTTCHHHHHHSC--------SCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEH-HHHHHHHHHH
T ss_pred ceEEEeCcccccccchhhcccCC--------CEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCH-HHHHHHHHHH
Confidence 3 3567775 455555444432 122232221 1123678889999999985 22222222 2222222323
Q ss_pred hHhHHhHHHHHHHHHHHHHHHcCCCHHHHHH
Q 012479 306 RGILLGAVHGIVESLFRRFTENGMNEDLAYK 336 (462)
Q Consensus 306 qtvL~G~~paliea~~d~~v~~G~~~e~A~~ 336 (462)
.+. ....-+++.-+...+.+.|+++++...
T Consensus 231 N~~-~a~~ia~~nE~~~la~~~Gid~~~v~~ 260 (481)
T 2o3j_A 231 NAF-LAQRISSINSISAVCEATGAEISEVAH 260 (481)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHSCCHHHHHH
T ss_pred HHH-HHHHHHHHHHHHHHHHHhCcCHHHHHH
Confidence 321 222335677777777888998876654
No 97
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=99.02 E-value=6.5e-10 Score=115.33 Aligned_cols=158 Identities=19% Similarity=0.120 Sum_probs=97.5
Q ss_pred eeecCcccccc-cccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCC
Q 012479 93 IVRGGRDLFNL-LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD 171 (462)
Q Consensus 93 ~~~~~~~~f~~-~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~ 171 (462)
-+|+|+|.... ....+.| |||||||+|+||..+|+.++.. |++|+++++..... ..++.. ..+
T Consensus 127 ~~~~g~W~~~~~~~~el~g-ktlGiIGlG~IG~~vA~~l~~~------G~~V~~~d~~~~~~-----~~~~~~----~~~ 190 (404)
T 1sc6_A 127 KAHRGVGNKLAAGSFEARG-KKLGIIGYGHIGTQLGILAESL------GMYVYFYDIENKLP-----LGNATQ----VQH 190 (404)
T ss_dssp HHHHTCCC-----CCCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCCC-----CTTCEE----CSC
T ss_pred HHHcCCccccCCCccccCC-CEEEEEeECHHHHHHHHHHHHC------CCEEEEEcCCchhc-----cCCcee----cCC
Confidence 35778896432 2467999 9999999999999999999988 99987766643221 112332 458
Q ss_pred HhhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEeccch-------HHHhhhccccCCCCccEEecccCCCch
Q 012479 172 IYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFPKNIGVIAVCPKGMGP 242 (462)
Q Consensus 172 ~~eav~~ADvViLavpd~a~-~~vl-~eI~~~Lk~gaiL~~a~G~~-------i~~~~~~~i~~p~~v~VV~v~Pngpg~ 242 (462)
.+|++++||+|++++|.... ..++ ++.+..||+|++|+.++--. ...+.+..+ -...+||+..+|..+..
T Consensus 191 l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i-~gA~lDVf~~EP~~~~~ 269 (404)
T 1sc6_A 191 LSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHL-AGAAIDVFPTEPATNSD 269 (404)
T ss_dssp HHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSE-EEEEEEC---------C
T ss_pred HHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcCCc-cEEEEeecCCCCCCccc
Confidence 99999999999999997643 4566 46778899999988765321 112222111 11246788888854331
Q ss_pred h-hHHhhhcCccccCCCceEEEeeccC-CCHHHHH
Q 012479 243 S-VRRLYVQGKEINGAGINSSFAVHQD-VDGRATN 275 (462)
Q Consensus 243 ~-vr~lf~~G~~~~G~Gv~aliav~qd-~tgea~e 275 (462)
. ...++. --+.+++||-. .|.++.+
T Consensus 270 ~~~~pL~~--------~~nvilTPHi~~~T~ea~~ 296 (404)
T 1sc6_A 270 PFTSPLAE--------FDNVLLTPHIGGSTQEAQE 296 (404)
T ss_dssp TTTGGGTT--------CTTEEEECCCSCCSHHHHH
T ss_pred cccchhhc--------CCCEEECCCCCCCcHHHHH
Confidence 1 112333 35788999974 4555443
No 98
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=99.02 E-value=2.7e-09 Score=106.06 Aligned_cols=153 Identities=20% Similarity=0.168 Sum_probs=101.9
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecC---C--------CcCCHhhhhccCC
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN---G--------TLGDIYETISGSD 180 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d---~--------~~~~~~eav~~AD 180 (462)
+||+|||.|+||.++|..|.++ |.+|.+..|.. .+..++.|+...+ + .+.+.+++.+.+|
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~------g~~V~~~~r~~---~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~D 73 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT------GHCVSVVSRSD---YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPD 73 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT------TCEEEEECSTT---HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCS
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCeEEEEeCCh---HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCC
Confidence 7999999999999999999999 99988877753 2555556653211 0 1245666666899
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcE-EEEeccch-HHHhhhccccCCCCccEEecc------cCCCchhhHHhhhcCc
Q 012479 181 LVLLLISDAAQADNYEKIFSCMKPNSI-LGLSHGFL-LGHLQSMGLDFPKNIGVIAVC------PKGMGPSVRRLYVQGK 252 (462)
Q Consensus 181 vViLavpd~a~~~vl~eI~~~Lk~gai-L~~a~G~~-i~~~~~~~i~~p~~v~VV~v~------Pngpg~~vr~lf~~G~ 252 (462)
+||++||..+..+++++|.|+++++++ |+...|+. ...+.+ .+|.+ .|+... -..|+.+.. +
T Consensus 74 lVilavK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~---~~~~~-~vl~g~~~~~a~~~~pg~v~~-----~- 143 (320)
T 3i83_A 74 CTLLCIKVVEGADRVGLLRDAVAPDTGIVLISNGIDIEPEVAA---AFPDN-EVISGLAFIGVTRTAPGEIWH-----Q- 143 (320)
T ss_dssp EEEECCCCCTTCCHHHHHTTSCCTTCEEEEECSSSSCSHHHHH---HSTTS-CEEEEEEEEEEEEEETTEEEE-----E-
T ss_pred EEEEecCCCChHHHHHHHHhhcCCCCEEEEeCCCCChHHHHHH---HCCCC-cEEEEEEEeceEEcCCCEEEE-----C-
Confidence 999999999999999999999999885 56778985 344444 34443 344322 223444421 1
Q ss_pred cccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCC
Q 012479 253 EINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (462)
Q Consensus 253 ~~~G~Gv~aliav~qd~tgea~e~a~al~~aiG~~ 287 (462)
+.|... +......+.+..+.+.+++..-|..
T Consensus 144 ---~~~~~~-ig~~~~~~~~~~~~l~~~l~~~~~~ 174 (320)
T 3i83_A 144 ---AYGRLM-LGNYPGGVSERVKTLAAAFEEAGID 174 (320)
T ss_dssp ---EEEEEE-EEESSSCCCHHHHHHHHHHHHTTSC
T ss_pred ---CCCEEE-EecCCCCccHHHHHHHHHHHhCCCC
Confidence 123322 4333333345666777888888864
No 99
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.02 E-value=4.5e-09 Score=110.34 Aligned_cols=201 Identities=13% Similarity=0.101 Sum_probs=123.1
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHH-------------------cC-ceecCCCc
Q 012479 110 GINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-------------------AG-FTEENGTL 169 (462)
Q Consensus 110 gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~-------------------~G-~~~~d~~~ 169 (462)
|--+|+|||+|.||.++|.+|.+. |++|+++++..++ .+...+ .| +.. +
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~------G~~V~~~D~~~~k-v~~l~~g~~~~~epgl~~~~~~~~~~g~l~~----t 75 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDF------GHEVVCVDKDARK-IELLHQNVMPIYEPGLDALVASNVKAGRLSF----T 75 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCSTT-HHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE----E
T ss_pred CceEEEEEcCCHHHHHHHHHHHHC------CCEEEEEeCCHHH-HHHHhcCCCCccCCCHHHHHHhhcccCCEEE----E
Confidence 336899999999999999999999 9998877665443 333222 12 232 4
Q ss_pred CCHhhhhccCCeEEEeecch-----------hHHHHHHHHHhcCCCCcEEEEeccchHH-------HhhhccccCCCCcc
Q 012479 170 GDIYETISGSDLVLLLISDA-----------AQADNYEKIFSCMKPNSILGLSHGFLLG-------HLQSMGLDFPKNIG 231 (462)
Q Consensus 170 ~~~~eav~~ADvViLavpd~-----------a~~~vl~eI~~~Lk~gaiL~~a~G~~i~-------~~~~~~i~~p~~v~ 231 (462)
.++.+++++||+||+++|.. ...+++++|.+++++|++|++.+++... .+.+. ....++
T Consensus 76 td~~ea~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~--~~~~d~- 152 (446)
T 4a7p_A 76 TDLAEGVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAEV--APNSGA- 152 (446)
T ss_dssp SCHHHHHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHH--STTSCC-
T ss_pred CCHHHHHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHh--CCCCCc-
Confidence 67889999999999997644 3678889999999999999888766321 11110 111233
Q ss_pred EEecccCC--CchhhHHhhhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCc--ccccchhhhccccchhhhH
Q 012479 232 VIAVCPKG--MGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPF--TFATTLEQEYRSDIFGERG 307 (462)
Q Consensus 232 VV~v~Png--pg~~vr~lf~~G~~~~G~Gv~aliav~qd~tgea~e~a~al~~aiG~~~--viettf~~E~~~dlfgeqt 307 (462)
.|...|.. +|..+++... .+.++ +.. .+.++.+.+..++..++... ++.++-....+.-.+.+.+
T Consensus 153 ~v~~~Pe~a~eG~a~~d~~~---------p~~iv-vG~-~~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~N~ 221 (446)
T 4a7p_A 153 KVVSNPEFLREGAAIEDFKR---------PDRVV-VGT-EDEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAANA 221 (446)
T ss_dssp EEEECCCCCCTTSHHHHHHS---------CSCEE-EEC-SCHHHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHHHH
T ss_pred eEEeCcccccccchhhhccC---------CCEEE-EeC-CcHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHH
Confidence 34555642 2222221111 22322 232 24688899999998887531 1222212222232343443
Q ss_pred hHHhHHHHHHHHHHHHHHHcCCCHHHHHH
Q 012479 308 ILLGAVHGIVESLFRRFTENGMNEDLAYK 336 (462)
Q Consensus 308 vL~G~~paliea~~d~~v~~G~~~e~A~~ 336 (462)
. ...--+++.-+...+.+.|+++++...
T Consensus 222 ~-~a~~ia~~nE~~~l~~~~GiD~~~v~~ 249 (446)
T 4a7p_A 222 F-LAVKITFINEIADLCEQVGADVQEVSR 249 (446)
T ss_dssp H-HHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 2 233445777778888899999976655
No 100
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=99.01 E-value=2.9e-10 Score=116.38 Aligned_cols=164 Identities=16% Similarity=0.060 Sum_probs=108.1
Q ss_pred eeecCccccc---ccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcE-EEEEecCCchhHHHHHHcCceecCCC
Q 012479 93 IVRGGRDLFN---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIV-VKVGLRKGSRSFAEARAAGFTEENGT 168 (462)
Q Consensus 93 ~~~~~~~~f~---~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~-Vivg~r~~~~s~~~A~~~G~~~~d~~ 168 (462)
-+|.|+|.+. .....+.| ++|||||+|+||.++|+.|+.. |.+ |+++++.. ...+.+.+.|+..
T Consensus 144 ~~~~g~W~~~~~~~~~~~l~g-~tvgIIG~G~IG~~vA~~l~~~------G~~~V~~~d~~~-~~~~~~~~~g~~~---- 211 (364)
T 2j6i_A 144 QIINHDWEVAAIAKDAYDIEG-KTIATIGAGRIGYRVLERLVPF------NPKELLYYDYQA-LPKDAEEKVGARR---- 211 (364)
T ss_dssp HHHTTCCCHHHHHTTCCCSTT-CEEEEECCSHHHHHHHHHHGGG------CCSEEEEECSSC-CCHHHHHHTTEEE----
T ss_pred HHHhCCCCcCcccCCcccCCC-CEEEEECcCHHHHHHHHHHHhC------CCcEEEEECCCc-cchhHHHhcCcEe----
Confidence 4567889642 12367999 9999999999999999999988 986 87666543 3345667778764
Q ss_pred cCCHhhhhccCCeEEEeecchhH-HHHHH-HHHhcCCCCcEEEEec-cc--h----HHHhhhccccCCCCccEEecccCC
Q 012479 169 LGDIYETISGSDLVLLLISDAAQ-ADNYE-KIFSCMKPNSILGLSH-GF--L----LGHLQSMGLDFPKNIGVIAVCPKG 239 (462)
Q Consensus 169 ~~~~~eav~~ADvViLavpd~a~-~~vl~-eI~~~Lk~gaiL~~a~-G~--~----i~~~~~~~i~~p~~v~VV~v~Png 239 (462)
+.+.++++++||+|++++|.... ..++. +..+.||+|++|+.++ |- . +..+++..+. ....||.--.|.-
T Consensus 212 ~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~-gA~LDVf~~EP~~ 290 (364)
T 2j6i_A 212 VENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLR-GYGGDVWFPQPAP 290 (364)
T ss_dssp CSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE-EEEESCCSSSSCC
T ss_pred cCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCc-EEEEecCCCCCCC
Confidence 45899999999999999998643 45564 6788999999887665 32 1 1222221111 2346777777754
Q ss_pred CchhhHHhhhcCccccCCCceEEEeecc-CCCHHHHH
Q 012479 240 MGPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATN 275 (462)
Q Consensus 240 pg~~vr~lf~~G~~~~G~Gv~aliav~q-d~tgea~e 275 (462)
+.+....+-.. .+-+.+++||- ..|.++.+
T Consensus 291 ~~~pL~~~~~~------~~~nvilTPHia~~t~e~~~ 321 (364)
T 2j6i_A 291 KDHPWRDMRNK------YGAGNAMTPHYSGTTLDAQT 321 (364)
T ss_dssp TTCHHHHCCCT------TSCCEEECCSCGGGSHHHHH
T ss_pred CCChHHhccCC------ccCcEEECCccCcCCHHHHH
Confidence 44433221000 01278899987 34555543
No 101
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.00 E-value=5.2e-09 Score=109.84 Aligned_cols=204 Identities=13% Similarity=0.088 Sum_probs=119.2
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHH---------------H----cCceecCCCcCC
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR---------------A----AGFTEENGTLGD 171 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~---------------~----~G~~~~d~~~~~ 171 (462)
++||+|||+|.||.++|.+|.+. |.|++|++.++. .+..+... + .++.. +.+
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~----g~G~~V~~~d~~-~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~----t~~ 75 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHM----CPEIRVTVVDVN-ESRINAWNSPTLPIYEPGLKEVVESCRGKNLFF----STN 75 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHH----CTTSEEEEECSC-HHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE----ESC
T ss_pred ccEEEEECCCHHHHHHHHHHHhc----CCCCEEEEEECC-HHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEE----ECC
Confidence 47999999999999999999876 224687766554 33232211 1 23432 457
Q ss_pred HhhhhccCCeEEEeecchh---------------HHHHHHHHHhcCCCCcEEEEeccchHH-------HhhhccccCCCC
Q 012479 172 IYETISGSDLVLLLISDAA---------------QADNYEKIFSCMKPNSILGLSHGFLLG-------HLQSMGLDFPKN 229 (462)
Q Consensus 172 ~~eav~~ADvViLavpd~a---------------~~~vl~eI~~~Lk~gaiL~~a~G~~i~-------~~~~~~i~~p~~ 229 (462)
+++++++||+||+++|... ..++.++|.+++++|++|++.+.+... .+.+ .....
T Consensus 76 ~~e~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~---~~~~~ 152 (467)
T 2q3e_A 76 IDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDA---NTKPN 152 (467)
T ss_dssp HHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHH---TCCTT
T ss_pred HHHHHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHH---hCCCC
Confidence 7889999999999998543 356777899999999988876544211 1111 00112
Q ss_pred cc-EEecccC--CCchhhHHhhhcCccccCCCceEEEee-ccCCCHHHHHHHHHHHHHh-CCCcccccchhhhccccchh
Q 012479 230 IG-VIAVCPK--GMGPSVRRLYVQGKEINGAGINSSFAV-HQDVDGRATNVALGWSVAL-GSPFTFATTLEQEYRSDIFG 304 (462)
Q Consensus 230 v~-VV~v~Pn--gpg~~vr~lf~~G~~~~G~Gv~aliav-~qd~tgea~e~a~al~~ai-G~~~viettf~~E~~~dlfg 304 (462)
++ .|...|. .++..+.+++.. -..++.. ....+++..+.+..++..+ |...++.+.. ...+.-.+.
T Consensus 153 ~d~~V~~~Pe~~~~G~~~~d~~~~--------~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~-~~ae~~Kl~ 223 (467)
T 2q3e_A 153 LNLQVLSNPEFLAEGTAIKDLKNP--------DRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNT-WSSELSKLA 223 (467)
T ss_dssp CEEEEEECCCCCCTTSHHHHHHSC--------SCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECH-HHHHHHHHH
T ss_pred CCeEEEeCHHHhhcccchhhccCC--------CEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCH-HHHHHHHHH
Confidence 23 2345554 345554444432 1122331 1113578899999999998 6432222221 111111222
Q ss_pred hhHhHHhHHHHHHHHHHHHHHHcCCCHHHHHH
Q 012479 305 ERGILLGAVHGIVESLFRRFTENGMNEDLAYK 336 (462)
Q Consensus 305 eqtvL~G~~paliea~~d~~v~~G~~~e~A~~ 336 (462)
+.+. ....-+++.-+...+.+.|+++++...
T Consensus 224 ~N~~-~a~~ia~~nE~~~l~~~~Gid~~~v~~ 254 (467)
T 2q3e_A 224 ANAF-LAQRISSINSISALCEATGADVEEVAT 254 (467)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred HHHH-HHHHHHHHHHHHHHHHHhCcCHHHHHH
Confidence 3222 222335666667777888999876554
No 102
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.00 E-value=3.6e-09 Score=105.30 Aligned_cols=106 Identities=20% Similarity=0.283 Sum_probs=77.4
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCC---------CcCCHhhhh
Q 012479 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG---------TLGDIYETI 176 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~---------~~~~~~eav 176 (462)
.++.. +||+|||.|+||.++|..|.++ |++|.++ ++ ++..+...+.|+..... ...+. +.+
T Consensus 15 ~~~~~-~kI~IiGaGa~G~~~a~~L~~~------G~~V~l~-~~-~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~-~~~ 84 (318)
T 3hwr_A 15 LYFQG-MKVAIMGAGAVGCYYGGMLARA------GHEVILI-AR-PQHVQAIEATGLRLETQSFDEQVKVSASSDP-SAV 84 (318)
T ss_dssp ------CEEEEESCSHHHHHHHHHHHHT------TCEEEEE-CC-HHHHHHHHHHCEEEECSSCEEEECCEEESCG-GGG
T ss_pred hhccC-CcEEEECcCHHHHHHHHHHHHC------CCeEEEE-Ec-HhHHHHHHhCCeEEEcCCCcEEEeeeeeCCH-HHc
Confidence 34444 8999999999999999999999 9988777 54 44456666667543100 02334 446
Q ss_pred ccCCeEEEeecchhHHHHHHHHHhcCCCCcE-EEEeccchH-HHhhh
Q 012479 177 SGSDLVLLLISDAAQADNYEKIFSCMKPNSI-LGLSHGFLL-GHLQS 221 (462)
Q Consensus 177 ~~ADvViLavpd~a~~~vl~eI~~~Lk~gai-L~~a~G~~i-~~~~~ 221 (462)
+++|+||++||+....+++++|.|+++++++ |+...|+.. ..+.+
T Consensus 85 ~~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~l~~ 131 (318)
T 3hwr_A 85 QGADLVLFCVKSTDTQSAALAMKPALAKSALVLSLQNGVENADTLRS 131 (318)
T ss_dssp TTCSEEEECCCGGGHHHHHHHHTTTSCTTCEEEEECSSSSHHHHHHH
T ss_pred CCCCEEEEEcccccHHHHHHHHHHhcCCCCEEEEeCCCCCcHHHHHH
Confidence 8999999999999999999999999999986 467889865 34433
No 103
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=98.99 E-value=2.6e-10 Score=115.13 Aligned_cols=155 Identities=17% Similarity=0.159 Sum_probs=101.8
Q ss_pred eeecCcccc-c--ccc----cccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceec
Q 012479 93 IVRGGRDLF-N--LLP----DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE 165 (462)
Q Consensus 93 ~~~~~~~~f-~--~~~----~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~ 165 (462)
-+|.|+|.. . ... ..+.| ++|||||+|.||.++|+.|+.. |++|+++++...+ +.+.+.|+..
T Consensus 122 ~~~~g~w~~~~~~~~~~~~~~~l~g-~~vgIIG~G~iG~~vA~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~~- 191 (333)
T 2d0i_A 122 FIRRGEWESHAKIWTGFKRIESLYG-KKVGILGMGAIGKAIARRLIPF------GVKLYYWSRHRKV--NVEKELKARY- 191 (333)
T ss_dssp HHHTTCCCCHHHHHTTSCCCCCSTT-CEEEEECCSHHHHHHHHHHGGG------TCEEEEECSSCCH--HHHHHHTEEE-
T ss_pred HHHcCCCCcCcccccCCcccCCCCc-CEEEEEccCHHHHHHHHHHHHC------CCEEEEECCCcch--hhhhhcCcee-
Confidence 356778842 1 112 57899 9999999999999999999988 9998776665433 5556667763
Q ss_pred CCCcCCHhhhhccCCeEEEeecch-hHHHHHH-HHHhcCCCCcEEEEec-cchH------HHhhhccccCCCCccEEecc
Q 012479 166 NGTLGDIYETISGSDLVLLLISDA-AQADNYE-KIFSCMKPNSILGLSH-GFLL------GHLQSMGLDFPKNIGVIAVC 236 (462)
Q Consensus 166 d~~~~~~~eav~~ADvViLavpd~-a~~~vl~-eI~~~Lk~gaiL~~a~-G~~i------~~~~~~~i~~p~~v~VV~v~ 236 (462)
.+.++++++||+|++++|.. ....++. ++.+.|++| +|+.++ |..+ ..+.+..+. ....+|....
T Consensus 192 ----~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~-gaglDv~~~E 265 (333)
T 2d0i_A 192 ----MDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLK-GYATDVFEKE 265 (333)
T ss_dssp ----CCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBC-EEEESCCSSS
T ss_pred ----cCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCce-EEEecCCCCC
Confidence 47889999999999999987 4556664 577889999 887665 3211 111110010 1234555444
Q ss_pred cCCCchhhHHhhhcCccccCCCc-eEEEeecc-CCCHHHHH
Q 012479 237 PKGMGPSVRRLYVQGKEINGAGI-NSSFAVHQ-DVDGRATN 275 (462)
Q Consensus 237 Pngpg~~vr~lf~~G~~~~G~Gv-~aliav~q-d~tgea~e 275 (462)
|. |. ..+|. .. +++++||. ..+.+..+
T Consensus 266 P~-~~---~~L~~--------~~~nviltPh~~~~t~~~~~ 294 (333)
T 2d0i_A 266 PV-RE---HELFK--------YEWETVLTPHYAGLALEAQE 294 (333)
T ss_dssp SC-SC---CGGGG--------CTTTEEECCSCTTCCHHHHH
T ss_pred CC-CC---chHHc--------CCCCEEEcCccCCCcHHHHH
Confidence 52 22 23454 36 78899987 44555443
No 104
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.98 E-value=1.3e-08 Score=106.47 Aligned_cols=193 Identities=11% Similarity=0.086 Sum_probs=115.7
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHH------------------cCceecCCCcCCHh
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA------------------AGFTEENGTLGDIY 173 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~------------------~G~~~~d~~~~~~~ 173 (462)
+||+|||+|.||.++|..|. . |++|+++++. +...+...+ .++.. +.+++
T Consensus 37 mkIaVIGlG~mG~~lA~~La-~------G~~V~~~D~~-~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~----ttd~~ 104 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIA-Q------NHEVVALDIV-QAKVDMLNQKISPIVDKEIQEYLAEKPLNFRA----TTDKH 104 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T------TSEEEEECSC-HHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEE----ESCHH
T ss_pred CEEEEECcCHHHHHHHHHHH-c------CCeEEEEecC-HHHhhHHhccCCccccccHHHHHhhccCCeEE----EcCHH
Confidence 89999999999999999886 4 7888765554 433333332 12332 46788
Q ss_pred hhhccCCeEEEeecch-----------hHHHHHHHHHhcCCCCcEEEEeccchHH---HhhhccccCCCCccEEecccC-
Q 012479 174 ETISGSDLVLLLISDA-----------AQADNYEKIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPK- 238 (462)
Q Consensus 174 eav~~ADvViLavpd~-----------a~~~vl~eI~~~Lk~gaiL~~a~G~~i~---~~~~~~i~~p~~v~VV~v~Pn- 238 (462)
+++++||+||+++|.. ...++++.|.+ +++|++|++.+.+... .+.+ .+.+. .+...|-
T Consensus 105 ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~---~l~~~--~v~~sPe~ 178 (432)
T 3pid_A 105 DAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKE---RLGID--NVIFSPEF 178 (432)
T ss_dssp HHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHH---HHTCC--CEEECCCC
T ss_pred HHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHH---HHhhc--cEeecCcc
Confidence 9999999999999975 45677888999 9999999888766432 2221 22221 3444775
Q ss_pred -CCchhhHHhhhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHH--hCCC-cccccchhhhccccchhhhHhHHhHHH
Q 012479 239 -GMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVA--LGSP-FTFATTLEQEYRSDIFGERGILLGAVH 314 (462)
Q Consensus 239 -gpg~~vr~lf~~G~~~~G~Gv~aliav~qd~tgea~e~a~al~~a--iG~~-~viettf~~E~~~dlfgeqtvL~G~~p 314 (462)
.|+..+.+... .+. |.+.. +.+..+.+..++.. ++.. .++.+.. .+-+.-.+-+.+.+ ..--
T Consensus 179 ~~~G~A~~~~l~---------p~r-IvvG~--~~~~~~~~~~ll~~~~~~~~~~v~~~~~-~~AE~~Kl~~N~~~-a~~I 244 (432)
T 3pid_A 179 LREGRALYDNLH---------PSR-IVIGE--RSARAERFADLLKEGAIKQDIPTLFTDS-TEAEAIKLFANTYL-ALRV 244 (432)
T ss_dssp CCTTSHHHHHHS---------CSC-EEESS--CSHHHHHHHHHHHHHCSSSSCCEEECCH-HHHHHHHHHHHHHH-HHHH
T ss_pred CCcchhhhcccC---------Cce-EEecC--CHHHHHHHHHHHHhhhccCCCeEEecCc-cHHHHHHHHHHHHH-HHHH
Confidence 44554433332 122 22233 23566677777775 4432 2333332 22222223333322 3334
Q ss_pred HHHHHHHHHHHHcCCCHHHHHH
Q 012479 315 GIVESLFRRFTENGMNEDLAYK 336 (462)
Q Consensus 315 aliea~~d~~v~~G~~~e~A~~ 336 (462)
+++.-+...+.+.|++.++.+.
T Consensus 245 a~~nEl~~lae~~GiD~~~v~~ 266 (432)
T 3pid_A 245 AYFNELDSYAESQGLNSKQIIE 266 (432)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHH
Confidence 5666667777788888865544
No 105
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=98.97 E-value=3e-09 Score=106.37 Aligned_cols=94 Identities=17% Similarity=0.235 Sum_probs=74.6
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCC---------CcCCHhhhhccCCeE
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG---------TLGDIYETISGSDLV 182 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~---------~~~~~~eav~~ADvV 182 (462)
+||+|||+|+||.++|..|.++ |++|.+..|. +..+..++.|+..... ...+.++ ++++|+|
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~------g~~V~~~~r~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~V 74 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA------GEAINVLARG--ATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVV 74 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT------TCCEEEECCH--HHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCEEEEEECh--HHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEE
Confidence 7999999999999999999999 9888877763 4456666778753110 0235555 6899999
Q ss_pred EEeecchhHHHHHHHHHhcCCCCcEE-EEeccc
Q 012479 183 LLLISDAAQADNYEKIFSCMKPNSIL-GLSHGF 214 (462)
Q Consensus 183 iLavpd~a~~~vl~eI~~~Lk~gaiL-~~a~G~ 214 (462)
|++||+.+..+++++|.|+++++++| +...|+
T Consensus 75 ilavk~~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 75 IVAVKAPALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp EECCCHHHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred EEeCCchhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 99999999999999999999999865 567785
No 106
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.96 E-value=1.5e-08 Score=106.96 Aligned_cols=200 Identities=14% Similarity=0.115 Sum_probs=119.7
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcC--------------------ceecCCCc
Q 012479 110 GINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG--------------------FTEENGTL 169 (462)
Q Consensus 110 gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G--------------------~~~~d~~~ 169 (462)
|-+||+|||+|.||.++|..|.+. |++|+++++. ++..+...+.+ +.. +
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~------G~~V~~~d~~-~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~----t 75 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADI------GHDVFCLDVD-QAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF----S 75 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE----E
T ss_pred CCceEEEECcCHHHHHHHHHHHhC------CCEEEEEECC-HHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE----E
Confidence 458999999999999999999999 9988766554 43344443321 121 3
Q ss_pred CCHhhhhccCCeEEEeecc----------hhHHHHHHHHHhcCCCCcEEEEeccchHH-------HhhhccccCC---CC
Q 012479 170 GDIYETISGSDLVLLLISD----------AAQADNYEKIFSCMKPNSILGLSHGFLLG-------HLQSMGLDFP---KN 229 (462)
Q Consensus 170 ~~~~eav~~ADvViLavpd----------~a~~~vl~eI~~~Lk~gaiL~~a~G~~i~-------~~~~~~i~~p---~~ 229 (462)
.+.++++++||+||++||. ....+++++|.++++++++|+..+++.+. .+.+. +..+ .+
T Consensus 76 td~~~a~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~~-~~~g~~~~~ 154 (478)
T 2y0c_A 76 TDIEAAVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEE-LAKRGGDQM 154 (478)
T ss_dssp CCHHHHHHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHH-HHHTTCCCC
T ss_pred CCHHHHhhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHHH-hcCCCCCcc
Confidence 5677889999999999997 78888999999999999998877775321 11110 0001 22
Q ss_pred ccEEecccC--CCchhhHHhhhcCccccCCCceEEEeeccCCCH----HHHHHHHHHHHHhCC--Ccccccchhhhcccc
Q 012479 230 IGVIAVCPK--GMGPSVRRLYVQGKEINGAGINSSFAVHQDVDG----RATNVALGWSVALGS--PFTFATTLEQEYRSD 301 (462)
Q Consensus 230 v~VV~v~Pn--gpg~~vr~lf~~G~~~~G~Gv~aliav~qd~tg----ea~e~a~al~~aiG~--~~viettf~~E~~~d 301 (462)
+. +...|. .||..+.+... .+.++ +..+ ++ +..+.+..+++.++. ..++.+.. ...+.-
T Consensus 155 ~~-v~~~Pe~~~eG~~~~~~~~---------p~~iv-iG~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di-~~ae~~ 221 (478)
T 2y0c_A 155 FS-VVSNPEFLKEGAAVDDFTR---------PDRIV-IGCD-DDVPGERARELMKKLYAPFNRNHERTLYMDV-RSAEFT 221 (478)
T ss_dssp EE-EEECCCCCCTTCHHHHHHS---------CSCEE-EECC-SSHHHHHHHHHHHHHTGGGGSSSCCEEEECH-HHHHHH
T ss_pred EE-EEEChhhhcccceeeccCC---------CCEEE-EEEC-CCcccHHHHHHHHHHHHHHhccCCeEEcCCH-HHHHHH
Confidence 22 445554 23333222211 22222 2322 23 678888888888763 11222221 122222
Q ss_pred chhhhHhHHhHHHHHHHHHHHHHHHcCCCHHHHH
Q 012479 302 IFGERGILLGAVHGIVESLFRRFTENGMNEDLAY 335 (462)
Q Consensus 302 lfgeqtvL~G~~paliea~~d~~v~~G~~~e~A~ 335 (462)
.+.+.+ +....-+++.-+...+.+.|++.++..
T Consensus 222 Kl~~N~-~~a~~ia~~nE~~~la~~~Gid~~~v~ 254 (478)
T 2y0c_A 222 KYAANA-MLATRISFMNELANLADRFGADIEAVR 254 (478)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 222222 122233467777788888999986544
No 107
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.96 E-value=1.7e-09 Score=112.79 Aligned_cols=158 Identities=18% Similarity=0.141 Sum_probs=102.9
Q ss_pred eecCcccccc-cccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCH
Q 012479 94 VRGGRDLFNL-LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI 172 (462)
Q Consensus 94 ~~~~~~~f~~-~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~ 172 (462)
+|+|+|.... ....+.| |+|||||+|+||.++|+.++.. |++|+++++..... ..+... ..+.
T Consensus 139 ~~~g~W~~~~~~~~el~g-ktvGIIGlG~IG~~vA~~l~~~------G~~V~~yd~~~~~~-----~~~~~~----~~sl 202 (416)
T 3k5p_A 139 AHAGGWEKTAIGSREVRG-KTLGIVGYGNIGSQVGNLAESL------GMTVRYYDTSDKLQ-----YGNVKP----AASL 202 (416)
T ss_dssp HHTTCCCCCCTTCCCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECTTCCCC-----BTTBEE----CSSH
T ss_pred hhcccccccCCCCccCCC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEECCcchhc-----ccCcEe----cCCH
Confidence 5778996543 2468999 9999999999999999999988 99987766542211 123332 5689
Q ss_pred hhhhccCCeEEEeecchhHH-HHH-HHHHhcCCCCcEEEEec-cch------HHHhhhccccCCCCccEEecccCCCchh
Q 012479 173 YETISGSDLVLLLISDAAQA-DNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (462)
Q Consensus 173 ~eav~~ADvViLavpd~a~~-~vl-~eI~~~Lk~gaiL~~a~-G~~------i~~~~~~~i~~p~~v~VV~v~Pngpg~~ 243 (462)
+|++++||+|++++|..... .++ ++.+..||+|++|+.++ |-. +..+++..+ .....||.-..|..+...
T Consensus 203 ~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i-~gAalDVf~~EP~~~~~~ 281 (416)
T 3k5p_A 203 DELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHL-AGAAIDVFPVEPASNGER 281 (416)
T ss_dssp HHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSE-EEEEECCCSSCCSSTTSC
T ss_pred HHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCc-cEEEeCCCCCCCCCcccc
Confidence 99999999999999976553 455 36788899999988665 421 122222111 123466777777554321
Q ss_pred h-HHhhhcCccccCCCceEEEeecc-CCCHHHHHH
Q 012479 244 V-RRLYVQGKEINGAGINSSFAVHQ-DVDGRATNV 276 (462)
Q Consensus 244 v-r~lf~~G~~~~G~Gv~aliav~q-d~tgea~e~ 276 (462)
. ..++. --+.+++||- ..|.++.+.
T Consensus 282 ~~~pL~~--------~~nvilTPHig~~T~ea~~~ 308 (416)
T 3k5p_A 282 FSTPLQG--------LENVILTPHIGGSTEEAQER 308 (416)
T ss_dssp CCCTTTT--------CTTEEECCSCTTCCHHHHHH
T ss_pred cchhHhc--------CCCEEECCCCCCCCHHHHHH
Confidence 1 11222 2478899994 566665543
No 108
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=98.95 E-value=1.5e-10 Score=116.89 Aligned_cols=147 Identities=18% Similarity=0.163 Sum_probs=99.9
Q ss_pred eecCcccccccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHh
Q 012479 94 VRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY 173 (462)
Q Consensus 94 ~~~~~~~f~~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~ 173 (462)
+|+|+|..... ..+.| ++|||||+|+||.++|+.|+.. |++|+++++..... ..+ .+... ..+.+
T Consensus 125 ~~~g~W~~~~~-~~l~g-~tvGIIGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~~-~~~--~~~~~----~~~l~ 189 (324)
T 3hg7_A 125 QKQRLWQSHPY-QGLKG-RTLLILGTGSIGQHIAHTGKHF------GMKVLGVSRSGRER-AGF--DQVYQ----LPALN 189 (324)
T ss_dssp HHTTCCCCCCC-CCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCCC-TTC--SEEEC----GGGHH
T ss_pred HhhCCCcCCCC-ccccc-ceEEEEEECHHHHHHHHHHHhC------CCEEEEEcCChHHh-hhh--hcccc----cCCHH
Confidence 57789976544 78999 9999999999999999999988 99987776653221 111 11121 45789
Q ss_pred hhhccCCeEEEeecchhH-HHHHH-HHHhcCCCCcEEEEec-cch------HHHhhhccccCCCCccEEecccCCCchhh
Q 012479 174 ETISGSDLVLLLISDAAQ-ADNYE-KIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGPSV 244 (462)
Q Consensus 174 eav~~ADvViLavpd~a~-~~vl~-eI~~~Lk~gaiL~~a~-G~~------i~~~~~~~i~~p~~v~VV~v~Pngpg~~v 244 (462)
|++++||+|++++|.... ..++. +.+..||+|++|+.++ |-. +..+++..+ .....||.-..|--+.+.
T Consensus 190 ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i-~ga~lDV~~~EPl~~~~p- 267 (324)
T 3hg7_A 190 KMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKL-GMAVLDVFEQEPLPADSP- 267 (324)
T ss_dssp HHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSS-SEEEESCCSSSSCCTTCT-
T ss_pred HHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCc-eEEEeccCCCCCCCCCCh-
Confidence 999999999999996543 44554 6778899999998776 321 122232111 123467777777443332
Q ss_pred HHhhhcCccccCCCceEEEeecc
Q 012479 245 RRLYVQGKEINGAGINSSFAVHQ 267 (462)
Q Consensus 245 r~lf~~G~~~~G~Gv~aliav~q 267 (462)
++. --+++++||-
T Consensus 268 --L~~--------~~nvilTPHi 280 (324)
T 3hg7_A 268 --LWG--------QPNLIITPHN 280 (324)
T ss_dssp --TTT--------CTTEEECCSC
T ss_pred --hhc--------CCCEEEeCCC
Confidence 333 2578889886
No 109
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=98.95 E-value=1.9e-10 Score=115.66 Aligned_cols=147 Identities=13% Similarity=0.096 Sum_probs=99.9
Q ss_pred eecCcccccccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHh
Q 012479 94 VRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY 173 (462)
Q Consensus 94 ~~~~~~~f~~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~ 173 (462)
+|+|+|.... ...+.| ++|||||+|+||.++|+.|+.. |++|+++++..... .++... ....+.+
T Consensus 124 ~~~g~W~~~~-~~~l~g-~tvGIiG~G~IG~~vA~~l~~~------G~~V~~~dr~~~~~------~~~~~~-~~~~~l~ 188 (315)
T 3pp8_A 124 KNQALWKPLP-EYTREE-FSVGIMGAGVLGAKVAESLQAW------GFPLRCWSRSRKSW------PGVESY-VGREELR 188 (315)
T ss_dssp HHTTCCCCCC-CCCSTT-CCEEEECCSHHHHHHHHHHHTT------TCCEEEEESSCCCC------TTCEEE-ESHHHHH
T ss_pred HHhcccCCCC-CCCcCC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEEcCCchhh------hhhhhh-cccCCHH
Confidence 4678997664 378999 9999999999999999999988 99988776653321 233210 0124688
Q ss_pred hhhccCCeEEEeecchh-HHHHH-HHHHhcCCCCcEEEEec-cch------HHHhhhccccCCCCccEEecccCCCchhh
Q 012479 174 ETISGSDLVLLLISDAA-QADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGPSV 244 (462)
Q Consensus 174 eav~~ADvViLavpd~a-~~~vl-~eI~~~Lk~gaiL~~a~-G~~------i~~~~~~~i~~p~~v~VV~v~Pngpg~~v 244 (462)
|++++||+|++++|... ...++ ++.++.||+|++|+.++ |-. +..+++..+. ....||....|--+.+.
T Consensus 189 ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~-gA~lDV~~~EPl~~~~p- 266 (315)
T 3pp8_A 189 AFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLK-GAMLDVFSQEPLPQESP- 266 (315)
T ss_dssp HHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE-EEEESCCSSSSCCTTCG-
T ss_pred HHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCcc-EEEcCCCCCCCCCCCCh-
Confidence 99999999999999554 45566 47889999999988776 321 1222221111 23467777777433332
Q ss_pred HHhhhcCccccCCCceEEEeecc
Q 012479 245 RRLYVQGKEINGAGINSSFAVHQ 267 (462)
Q Consensus 245 r~lf~~G~~~~G~Gv~aliav~q 267 (462)
++. --+++++||-
T Consensus 267 --L~~--------~~nvilTPHi 279 (315)
T 3pp8_A 267 --LWR--------HPRVAMTPHI 279 (315)
T ss_dssp --GGG--------CTTEEECSSC
T ss_pred --hhc--------CCCEEECCCC
Confidence 343 2467889886
No 110
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=98.92 E-value=3.5e-08 Score=99.54 Aligned_cols=152 Identities=13% Similarity=0.145 Sum_probs=113.5
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHH-----------HHHHcCceecC----------CCc
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFA-----------EARAAGFTEEN----------GTL 169 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~-----------~A~~~G~~~~d----------~~~ 169 (462)
+.||+|||.|.||..+|..+..+ |++|++.+... +..+ ...+.|..... ..+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~------G~~V~l~D~~~-~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~ 78 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG------GFRVKLYDIEP-RQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC 78 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT------TCCEEEECSCH-HHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE
T ss_pred CCeEEEECCcHHHHHHHHHHHhC------CCeEEEEECCH-HHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccc
Confidence 37999999999999999999999 99998776542 2222 22223322100 014
Q ss_pred CCHhhhhccCCeEEEeecchhH--HHHHHHHHhcCCCCcEE-EEeccchHHHhhhccccCCCCccEEecccCCCchhhHH
Q 012479 170 GDIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSIL-GLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRR 246 (462)
Q Consensus 170 ~~~~eav~~ADvViLavpd~a~--~~vl~eI~~~Lk~gaiL-~~a~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~ 246 (462)
.+.+|++++||+||=++|-..- .++|.+|-++++++++| +-++++.+..+.+ .....-+|+..||--|.+.
T Consensus 79 ~~l~~a~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is~ia~---~~~~p~r~ig~HffNP~~~--- 152 (319)
T 3ado_A 79 TNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFT---GLAHVKQCIVAHPVNPPYY--- 152 (319)
T ss_dssp CCHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHT---TCTTGGGEEEEEECSSTTT---
T ss_pred cchHhHhccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccchhhhh---hccCCCcEEEecCCCCccc---
Confidence 5788899999999999996655 46999999999999987 4677888877765 2233347999999888877
Q ss_pred hhhcCccccCCCceEE-EeeccCCCHHHHHHHHHHHHHhCCC
Q 012479 247 LYVQGKEINGAGINSS-FAVHQDVDGRATNVALGWSVALGSP 287 (462)
Q Consensus 247 lf~~G~~~~G~Gv~al-iav~qd~tgea~e~a~al~~aiG~~ 287 (462)
++.+ +.++...+++.++.+.++++.+|..
T Consensus 153 ------------m~LVEiv~g~~Ts~~~~~~~~~~~~~~gk~ 182 (319)
T 3ado_A 153 ------------IPLVELVPHPETSPATVDRTHALMRKIGQS 182 (319)
T ss_dssp ------------CCEEEEEECTTCCHHHHHHHHHHHHHTTCE
T ss_pred ------------cchHHhcCCCCCcHHHHHHHHHHHHHhCCc
Confidence 3221 4568889999999999999999964
No 111
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.90 E-value=5.7e-09 Score=103.70 Aligned_cols=96 Identities=20% Similarity=0.204 Sum_probs=74.6
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHc-CceecC----------CCcCCHhhhhccCC
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEEN----------GTLGDIYETISGSD 180 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~-G~~~~d----------~~~~~~~eav~~AD 180 (462)
+||+|||+|.||..+|..|.+. |++|.+.+|..+ ..+...+. |+...+ ....+.+++++++|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~------g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 77 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK------GQSVLAWDIDAQ-RIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDAD 77 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHH-HHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCS
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCHH-HHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCC
Confidence 7999999999999999999998 988877665433 34444444 432100 01457788899999
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEeccc
Q 012479 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (462)
Q Consensus 181 vViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~G~ 214 (462)
+||+++|+..+.++++++.++++++++|++..|+
T Consensus 78 ~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~~~~ 111 (359)
T 1bg6_A 78 VILIVVPAIHHASIAANIASYISEGQLIILNPGA 111 (359)
T ss_dssp EEEECSCGGGHHHHHHHHGGGCCTTCEEEESSCC
T ss_pred EEEEeCCchHHHHHHHHHHHhCCCCCEEEEcCCC
Confidence 9999999999999999999999999987766663
No 112
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=98.89 E-value=2e-09 Score=108.64 Aligned_cols=160 Identities=13% Similarity=0.016 Sum_probs=102.6
Q ss_pred eeecCccccc-ccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCC
Q 012479 93 IVRGGRDLFN-LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD 171 (462)
Q Consensus 93 ~~~~~~~~f~-~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~ 171 (462)
-+|+|+|... .....+.| ++|||||+|+||.++|+.|+.. |.+|+++++...+. +.+ ++.. ..+
T Consensus 128 ~~~~g~w~~~~~~~~~l~g-~~vgIiG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~---~~~-~~~~----~~~ 192 (333)
T 1j4a_A 128 KVARHDLRWAPTIGREVRD-QVVGVVGTGHIGQVFMQIMEGF------GAKVITYDIFRNPE---LEK-KGYY----VDS 192 (333)
T ss_dssp HHHTTBCCCTTCCBCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCHH---HHH-TTCB----CSC
T ss_pred HHHcCCCccCCcccccCCC-CEEEEEccCHHHHHHHHHHHHC------CCEEEEECCCcchh---HHh-hCee----cCC
Confidence 3467777432 22467999 9999999999999999999988 99987766654332 222 3332 337
Q ss_pred HhhhhccCCeEEEeecchh-HHHHHH-HHHhcCCCCcEEEEec-cch------HHHhhhccccCCCCccEEecccCC--C
Q 012479 172 IYETISGSDLVLLLISDAA-QADNYE-KIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKG--M 240 (462)
Q Consensus 172 ~~eav~~ADvViLavpd~a-~~~vl~-eI~~~Lk~gaiL~~a~-G~~------i~~~~~~~i~~p~~v~VV~v~Png--p 240 (462)
.++++++||+|++++|... ...++. +..+.||+|++|+.++ |-. +..+++..+. ....||+--.|.. +
T Consensus 193 l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~-gA~LDV~~~EP~~l~~ 271 (333)
T 1j4a_A 193 LDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIF-GYAMDVYEGEVGIFNE 271 (333)
T ss_dssp HHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE-EEEESCCTTCTTTTTS
T ss_pred HHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCce-EEEEecCCCCCCcccc
Confidence 8999999999999999764 345563 5778899999887665 321 1122221111 2346777777731 1
Q ss_pred ch--------hhHHhhhcCccccCCCceEEEeecc-CCCHHHHHH
Q 012479 241 GP--------SVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNV 276 (462)
Q Consensus 241 g~--------~vr~lf~~G~~~~G~Gv~aliav~q-d~tgea~e~ 276 (462)
.+ ....++.. -+.+++||- ..|.++.+.
T Consensus 272 ~~~~~~~~~p~~~~L~~~--------~nvilTPHia~~t~~~~~~ 308 (333)
T 1j4a_A 272 DWEGKEFPDARLADLIAR--------PNVLVTPKTAFYTTHAVRN 308 (333)
T ss_dssp BCTTSCCSCHHHHHHHHC--------TTEEECSSCTTCBHHHHHH
T ss_pred ccccccCCccchhhHHhC--------CCEEECCccccCHHHHHHH
Confidence 11 11235542 477889987 345554433
No 113
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=98.89 E-value=1.3e-09 Score=110.83 Aligned_cols=156 Identities=17% Similarity=0.056 Sum_probs=101.7
Q ss_pred cCcccc--cccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHh
Q 012479 96 GGRDLF--NLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY 173 (462)
Q Consensus 96 ~~~~~f--~~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~ 173 (462)
+|+|.+ ......+.| ++|||||+|+||.++|+.|+.. |.+|+++++...+ ..+.++. ..+.+
T Consensus 132 ~g~~~w~~~~~~~~l~g-ktvgIiGlG~IG~~vA~~l~~~------G~~V~~~d~~~~~----~~~~~~~-----~~~l~ 195 (343)
T 2yq5_A 132 DHDFTWPSNLISNEIYN-LTVGLIGVGHIGSAVAEIFSAM------GAKVIAYDVAYNP----EFEPFLT-----YTDFD 195 (343)
T ss_dssp HCCCCCCGGGCBCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCG----GGTTTCE-----ECCHH
T ss_pred cCCcccccCCCccccCC-CeEEEEecCHHHHHHHHHHhhC------CCEEEEECCChhh----hhhcccc-----ccCHH
Confidence 555433 233578999 9999999999999999999988 9998777665432 1223343 35899
Q ss_pred hhhccCCeEEEeecchhH-HHHHH-HHHhcCCCCcEEEEec-cch------HHHhhhccccCCCCccEEecccCC-Cch-
Q 012479 174 ETISGSDLVLLLISDAAQ-ADNYE-KIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKG-MGP- 242 (462)
Q Consensus 174 eav~~ADvViLavpd~a~-~~vl~-eI~~~Lk~gaiL~~a~-G~~------i~~~~~~~i~~p~~v~VV~v~Png-pg~- 242 (462)
|++++||+|++++|.... ..++. +.+..||+|++|+.++ |-. +..+++.. ......||..-.|.. |..
T Consensus 196 ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~-i~gA~LDV~~~EP~~~~~~~ 274 (343)
T 2yq5_A 196 TVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGE-IAGAGLDTLAGESSYFGHTG 274 (343)
T ss_dssp HHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTS-SSCEEESCCTTGGGTTTCCS
T ss_pred HHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCC-CcEEEecccccCCCcccccc
Confidence 999999999999996433 44553 6788899999998776 321 12223211 223456777777731 110
Q ss_pred -------h-hHHhhhcCccccCCCceEEEeecc-CCCHHHHHH
Q 012479 243 -------S-VRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNV 276 (462)
Q Consensus 243 -------~-vr~lf~~G~~~~G~Gv~aliav~q-d~tgea~e~ 276 (462)
. ...++. --+++++||- ..|.++.+.
T Consensus 275 ~~~~~l~~~~~pL~~--------~~nvilTPHia~~t~ea~~~ 309 (343)
T 2yq5_A 275 LTDSEIPEDYKTLAK--------MPNVVITPHSAFYTETSIRN 309 (343)
T ss_dssp CCTTTSCHHHHHHTT--------CTTEEECSSCTTCBHHHHHH
T ss_pred ccccccccchhHHhc--------CCCEEECCccccchHHHHHH
Confidence 0 123444 2578899987 455555443
No 114
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.88 E-value=7.2e-08 Score=99.34 Aligned_cols=201 Identities=9% Similarity=0.016 Sum_probs=109.9
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecC--------------CCcCCHhhhhc
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN--------------GTLGDIYETIS 177 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d--------------~~~~~~~eav~ 177 (462)
|||+|||+|.||.++|..|.+ |++|++.++. .+..+...+.|....+ ....+..++++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-------G~~V~~~d~~-~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~ 72 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-------QNEVTIVDIL-PSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYK 72 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------TSEEEEECSC-HHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhC-------CCEEEEEECC-HHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhc
Confidence 589999999999999999863 6777665544 4434444444431000 01346778899
Q ss_pred cCCeEEEeecch-----------hHHHHHHHHHhcCCCCcEEEEeccch---HHHhhhccccCCCCccEEecccC--CCc
Q 012479 178 GSDLVLLLISDA-----------AQADNYEKIFSCMKPNSILGLSHGFL---LGHLQSMGLDFPKNIGVIAVCPK--GMG 241 (462)
Q Consensus 178 ~ADvViLavpd~-----------a~~~vl~eI~~~Lk~gaiL~~a~G~~---i~~~~~~~i~~p~~v~VV~v~Pn--gpg 241 (462)
+||+||+++|+. ...+++++|.+ ++++++|++.+... ...+.+ .++++ .|...|. .|+
T Consensus 73 ~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~~l~~---~~~~~--~v~~~Pe~~~~G 146 (402)
T 1dlj_A 73 EAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIGFITEMRQ---KFQTD--RIIFSPEFLRES 146 (402)
T ss_dssp HCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHHHHHH---HTTCS--CEEECCCCCCTT
T ss_pred CCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHHHHHH---HhCCC--eEEECCccccCc
Confidence 999999999987 47788899999 99999887743332 223322 33443 4445564 344
Q ss_pred hhhHHhhhcCccccCCCceEEEeeccCC---CHHHHHHHHHHHHHhCCC---cccccchhhhccccchhhhHhHHhHHHH
Q 012479 242 PSVRRLYVQGKEINGAGINSSFAVHQDV---DGRATNVALGWSVALGSP---FTFATTLEQEYRSDIFGERGILLGAVHG 315 (462)
Q Consensus 242 ~~vr~lf~~G~~~~G~Gv~aliav~qd~---tgea~e~a~al~~aiG~~---~viettf~~E~~~dlfgeqtvL~G~~pa 315 (462)
..+.+.... +. .++....+. ..+..+.+..++..-+.. .++.+... ..+.-.+-+.+. ...--+
T Consensus 147 ~a~~~~~~~-------~r-iviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~-~ae~~Kl~~N~~-~a~~ia 216 (402)
T 1dlj_A 147 KALYDNLYP-------SR-IIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGAS-EAEAVKLFANTY-LALRVA 216 (402)
T ss_dssp STTHHHHSC-------SC-EEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHH-HHHHHHHHHHHH-HHHHHH
T ss_pred chhhcccCC-------CE-EEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecChH-HHHHHHHHHHHH-HHHHHH
Confidence 433332221 11 222322111 114445556666543321 12222211 111111212221 122234
Q ss_pred HHHHHHHHHHHcCCCHHHHHH
Q 012479 316 IVESLFRRFTENGMNEDLAYK 336 (462)
Q Consensus 316 liea~~d~~v~~G~~~e~A~~ 336 (462)
++.-+...+.+.|++.++...
T Consensus 217 ~~nE~~~l~~~~Gid~~~v~~ 237 (402)
T 1dlj_A 217 YFNELDTYAESRKLNSHMIIQ 237 (402)
T ss_dssp HHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH
Confidence 666667777788888876554
No 115
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=98.83 E-value=2.1e-09 Score=108.61 Aligned_cols=104 Identities=17% Similarity=0.211 Sum_probs=78.4
Q ss_pred eeecCcccc--cccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcC
Q 012479 93 IVRGGRDLF--NLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG 170 (462)
Q Consensus 93 ~~~~~~~~f--~~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~ 170 (462)
-+|+|+|.+ ......+.| ++|||||+|.||.++|+.|+.. |.+|+++++...+. + +.++. ..
T Consensus 126 ~~~~g~w~~~~~~~~~~l~g-~~vgIiG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~---~-~~~~~-----~~ 189 (333)
T 1dxy_A 126 QLQAGDYEKAGTFIGKELGQ-QTVGVMGTGHIGQVAIKLFKGF------GAKVIAYDPYPMKG---D-HPDFD-----YV 189 (333)
T ss_dssp HHHTTCHHHHTCCCCCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCSS---C-CTTCE-----EC
T ss_pred HHHcCCcccccCCCccCCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEECCCcchh---h-Hhccc-----cC
Confidence 356777743 223468999 9999999999999999999988 99987766654332 1 12233 35
Q ss_pred CHhhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEec
Q 012479 171 DIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (462)
Q Consensus 171 ~~~eav~~ADvViLavpd~a~-~~vl-~eI~~~Lk~gaiL~~a~ 212 (462)
+.++++++||+|++++|.... ..++ ++..+.||+|++|+.++
T Consensus 190 ~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~s 233 (333)
T 1dxy_A 190 SLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTA 233 (333)
T ss_dssp CHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECS
T ss_pred CHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECC
Confidence 889999999999999997654 4556 46778899999988665
No 116
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=98.83 E-value=2.5e-09 Score=107.85 Aligned_cols=160 Identities=14% Similarity=0.040 Sum_probs=102.8
Q ss_pred eeecCcccc--cccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcC
Q 012479 93 IVRGGRDLF--NLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG 170 (462)
Q Consensus 93 ~~~~~~~~f--~~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~ 170 (462)
-+|+|+|.. ......+.| ++|||||+|.||.++|+.|+.. |.+|+++++...+. + +.++. ..
T Consensus 127 ~~~~g~w~~~~~~~~~~l~g-~~vgIiG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~---~-~~~~~-----~~ 190 (331)
T 1xdw_A 127 RTAKKNFKVDAFMFSKEVRN-CTVGVVGLGRIGRVAAQIFHGM------GATVIGEDVFEIKG---I-EDYCT-----QV 190 (331)
T ss_dssp HHTTTCCCCCSTTCCCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCCS---C-TTTCE-----EC
T ss_pred HHHcCCCccccCcCccCCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEECCCccHH---H-Hhccc-----cC
Confidence 346778753 222367999 9999999999999999999988 99987776654332 1 12333 35
Q ss_pred CHhhhhccCCeEEEeecchh-HHHHH-HHHHhcCCCCcEEEEeccch-------HHHhhhccccCCCCccEEecccCC-C
Q 012479 171 DIYETISGSDLVLLLISDAA-QADNY-EKIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFPKNIGVIAVCPKG-M 240 (462)
Q Consensus 171 ~~~eav~~ADvViLavpd~a-~~~vl-~eI~~~Lk~gaiL~~a~G~~-------i~~~~~~~i~~p~~v~VV~v~Png-p 240 (462)
+.++++++||+|++++|... ...++ ++..+.||+|++|+.++--. +..+++..+. ....||+-..|.. |
T Consensus 191 ~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~-gA~LDV~~~EP~~~~ 269 (331)
T 1xdw_A 191 SLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLG-GYGCDVLDGEASVFG 269 (331)
T ss_dssp CHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE-EEEESCCTTGGGTTT
T ss_pred CHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCce-EEEEecCCCCCCccc
Confidence 88999999999999999754 34555 36778899999988765221 1122221111 2346777777731 1
Q ss_pred ---------chhhHHhhhcCccccCCCceEEEeecc-CCCHHHHHH
Q 012479 241 ---------GPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNV 276 (462)
Q Consensus 241 ---------g~~vr~lf~~G~~~~G~Gv~aliav~q-d~tgea~e~ 276 (462)
.+....++.- .-+.+++||- ..|.++.+.
T Consensus 270 ~~~~~~~~~~~~~~~L~~~-------~~nvilTPHia~~t~~~~~~ 308 (331)
T 1xdw_A 270 KDLEGQKLENPLFEKLVDL-------YPRVLITPHLGSYTDEAVKN 308 (331)
T ss_dssp CCCTTSCCSSHHHHHHHHT-------TTTEEECCSCTTCSHHHHHH
T ss_pred ccccccccCccchHHHHhC-------CCCEEEcCccccChHHHHHH
Confidence 1111234441 1378889987 345555443
No 117
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.76 E-value=2e-07 Score=98.72 Aligned_cols=201 Identities=19% Similarity=0.181 Sum_probs=121.7
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCch---hHHHHHH---------------------cC-cee
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSR---SFAEARA---------------------AG-FTE 164 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~---s~~~A~~---------------------~G-~~~ 164 (462)
++||+|||+|.||.++|.+|.+. .|+ +|+++++..++ ..+...+ .| +..
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~-----~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ 92 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADA-----PCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFEC 92 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHS-----TTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHh-----CCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEE
Confidence 48999999999999999999865 167 88776665440 2222111 22 221
Q ss_pred cCCCcCCHhhhhccCCeEEEeecchh------------HHHHHHHHHhcCCCCcEEEEeccchHHH--------h-hhcc
Q 012479 165 ENGTLGDIYETISGSDLVLLLISDAA------------QADNYEKIFSCMKPNSILGLSHGFLLGH--------L-QSMG 223 (462)
Q Consensus 165 ~d~~~~~~~eav~~ADvViLavpd~a------------~~~vl~eI~~~Lk~gaiL~~a~G~~i~~--------~-~~~~ 223 (462)
+.+ .+++++||+||+++|... ...+.+.|.+++++|++|++.+++.... + +..+
T Consensus 93 ----ttd-~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ile~~~g 167 (478)
T 3g79_A 93 ----TPD-FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQILEEESG 167 (478)
T ss_dssp ----ESC-GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHHHHHHHHC
T ss_pred ----eCc-HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHHHHHHhcC
Confidence 234 788999999999998653 3456678999999999998887663211 1 1111
Q ss_pred ccCCCCccEEecccC--CCchhhHHhhhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHh-CCCcccccchhhhccc
Q 012479 224 LDFPKNIGVIAVCPK--GMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVAL-GSPFTFATTLEQEYRS 300 (462)
Q Consensus 224 i~~p~~v~VV~v~Pn--gpg~~vr~lf~~G~~~~G~Gv~aliav~qd~tgea~e~a~al~~ai-G~~~viettf~~E~~~ 300 (462)
.....++ .+...|. .+|..+.+... .+.++ ... +.+..+.+..++..+ +...+..++ ...-+.
T Consensus 168 ~~~~~d~-~v~~~Pe~~~~G~a~~~~~~---------~~~Iv-~G~--~~~~~~~~~~ly~~~~~~~~~~~~~-~~~aE~ 233 (478)
T 3g79_A 168 LKAGEDF-ALAHAPERVMVGRLLKNIRE---------HDRIV-GGI--DEASTKRAVELYSPVLTVGQVIPMS-ATAAEV 233 (478)
T ss_dssp CCBTTTB-EEEECCCCCCTTSHHHHHHH---------SCEEE-EES--SHHHHHHHHHHHGGGCSSCCEEEEE-HHHHHH
T ss_pred CCcCCce-eEEeCCccCCccchhhhhcC---------CcEEE-EeC--CHHHHHHHHHHHhhhccCCeEEeCC-HHHHHH
Confidence 1111222 3556674 45555433332 23333 233 567789999999999 654222222 222222
Q ss_pred cchhhhHhHHhHHHHHHHHHHHHHHHcCCCHHHHHH
Q 012479 301 DIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYK 336 (462)
Q Consensus 301 dlfgeqtvL~G~~paliea~~d~~v~~G~~~e~A~~ 336 (462)
-.+-+++.+ ..--+++.-+...+.+.|++.++.+.
T Consensus 234 ~Kl~~N~~~-a~~Ia~~nE~~~l~e~~GiD~~~v~~ 268 (478)
T 3g79_A 234 TKTAENTFR-DLQIAAINQLALYCEAMGINVYDVRT 268 (478)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 223333322 33345777777888889999976655
No 118
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=98.74 E-value=1.6e-08 Score=103.24 Aligned_cols=94 Identities=18% Similarity=0.217 Sum_probs=70.3
Q ss_pred CEEEEEcccchHHHHHHHHHH-hhhhhcCCcEEEEEec--CCchhHHHH-HHcCceec----CC-----------CcCCH
Q 012479 112 NQIGVIGWGSQGPAQAQNLRD-SLAEAKSDIVVKVGLR--KGSRSFAEA-RAAGFTEE----NG-----------TLGDI 172 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrd-s~~~~g~G~~Vivg~r--~~~~s~~~A-~~~G~~~~----d~-----------~~~~~ 172 (462)
|||+|||.|+||.++|..|.+ + |++|.++.+ .+.+..+.+ ++.|+... ++ ...++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~------G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRD------GVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDP 76 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTST------TEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCH
T ss_pred ceEEEECCCHHHHHHHHHHHhCC------CCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCH
Confidence 799999999999999999976 6 888877661 223334442 33331100 00 13567
Q ss_pred hhhhccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 012479 173 YETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 173 ~eav~~ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
+++++++|+||++||+....+++++|.++++++++|+..
T Consensus 77 ~~a~~~aD~Vilav~~~~~~~v~~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 77 EIAISGADVVILTVPAFAHEGYFQAMAPYVQDSALIVGL 115 (404)
T ss_dssp HHHHTTCSEEEECSCGGGHHHHHHHHTTTCCTTCEEEET
T ss_pred HHHhCCCCEEEEeCchHHHHHHHHHHHhhCCCCcEEEEc
Confidence 788999999999999999999999999999999887663
No 119
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.72 E-value=3e-07 Score=96.23 Aligned_cols=202 Identities=11% Similarity=0.108 Sum_probs=120.6
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhh-------------
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYET------------- 175 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~ea------------- 175 (462)
.| .|+.|||+|.||.++|.+|.+. |++|+++++. ++..+... .|.... .....+|+
T Consensus 10 ~~-~~~~ViGlGyvGlp~A~~La~~------G~~V~~~D~~-~~kv~~L~-~g~~pi--~epgl~~ll~~~~~~g~l~~t 78 (431)
T 3ojo_A 10 HG-SKLTVVGLGYIGLPTSIMFAKH------GVDVLGVDIN-QQTIDKLQ-NGQISI--EEPGLQEVYEEVLSSGKLKVS 78 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSC-HHHHHHHH-TTCCSS--CCTTHHHHHHHHHHTTCEEEE
T ss_pred cC-CccEEEeeCHHHHHHHHHHHHC------CCEEEEEECC-HHHHHHHH-CCCCCc--CCCCHHHHHHhhcccCceEEe
Confidence 45 8999999999999999999999 9998766655 33333332 232110 00011110
Q ss_pred --hccCCeEEEeecchh------------HHHHHHHHHhcCCCCcEEEEeccchHH---Hh-----hhccccCCCCccEE
Q 012479 176 --ISGSDLVLLLISDAA------------QADNYEKIFSCMKPNSILGLSHGFLLG---HL-----QSMGLDFPKNIGVI 233 (462)
Q Consensus 176 --v~~ADvViLavpd~a------------~~~vl~eI~~~Lk~gaiL~~a~G~~i~---~~-----~~~~i~~p~~v~VV 233 (462)
+++||+||+|||... ...+.+.|.+++++|++|++.+++... .+ ++.+.....++ .+
T Consensus 79 td~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g~~~~~d~-~v 157 (431)
T 3ojo_A 79 TTPEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDI-YL 157 (431)
T ss_dssp SSCCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHHTTTCCBTTTE-EE
T ss_pred CchhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHHHcCCCcCCCe-EE
Confidence 458999999999665 345667899999999998888776321 11 11111112232 35
Q ss_pred ecccC--CCchhhHHhhhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHh
Q 012479 234 AVCPK--GMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLG 311 (462)
Q Consensus 234 ~v~Pn--gpg~~vr~lf~~G~~~~G~Gv~aliav~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G 311 (462)
...|. .||..+.+... .+.++ ... +.+..+.+..+++.++...++.++. ..-+.-.+-+++.+ .
T Consensus 158 ~~~Pe~~~~G~A~~~~~~---------p~~Iv-~G~--~~~~~~~~~~ly~~~~~~~~~~~~~-~~AE~~Kl~~N~~~-a 223 (431)
T 3ojo_A 158 VHCPERVLPGKILEELVH---------NNRII-GGV--TKACIEAGKRVYRTFVQGEMIETDA-RTAEMSKLMENTYR-D 223 (431)
T ss_dssp EECCCCCCTTSHHHHHHH---------SCEEE-EES--SHHHHHHHHHHHTTTCCSCEEEEEH-HHHHHHHHHHHHHH-H
T ss_pred EECCCcCCCcchhhcccC---------CCEEE-EeC--CHHHHHHHHHHHHHHhCCcEEeCCH-HHHHHHHHHHHHHH-H
Confidence 56663 44554433322 33433 343 5789999999999998653333332 22222233344333 3
Q ss_pred HHHHHHHHHHHHHHHcCCCHHHHHH
Q 012479 312 AVHGIVESLFRRFTENGMNEDLAYK 336 (462)
Q Consensus 312 ~~paliea~~d~~v~~G~~~e~A~~ 336 (462)
.--+++.-+...+.+.|++.++...
T Consensus 224 ~~Ia~~nE~~~l~e~~GiD~~~v~~ 248 (431)
T 3ojo_A 224 VNIALANELTKICNNLNINVLDVIE 248 (431)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 3345777777888888999876554
No 120
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=98.69 E-value=5.2e-08 Score=96.55 Aligned_cols=119 Identities=20% Similarity=0.131 Sum_probs=83.0
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCC------cCCHhhhhccCCeEEEe
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGT------LGDIYETISGSDLVLLL 185 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~------~~~~~eav~~ADvViLa 185 (462)
|||+|||+|+||.++|..|. + |.+|.+..|.. ...+..++.|+...... .....++++.+|+||++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~------g~~V~~~~r~~-~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vila 74 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-L------YHDVTVVTRRQ-EQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVT 74 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T------TSEEEEECSCH-HHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHh-c------CCceEEEECCH-HHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEE
Confidence 79999999999999999999 8 98988776653 33445556687641100 00013467789999999
Q ss_pred ecchhHHHHHHHHHhcCCCCcEEEEeccchHH-HhhhccccCCCCccEEec------ccCCCchh
Q 012479 186 ISDAAQADNYEKIFSCMKPNSILGLSHGFLLG-HLQSMGLDFPKNIGVIAV------CPKGMGPS 243 (462)
Q Consensus 186 vpd~a~~~vl~eI~~~Lk~gaiL~~a~G~~i~-~~~~~~i~~p~~v~VV~v------~Pngpg~~ 243 (462)
||+.+..++++++.+. .++++|++..|+... .+.+ .+|.+ +|+.. ...+|+++
T Consensus 75 vK~~~~~~~l~~l~~~-~~~~ivs~~nGi~~~e~l~~---~~~~~-~vl~g~~~~~a~~~~pg~v 134 (307)
T 3ego_A 75 VKQHQLQSVFSSLERI-GKTNILFLQNGMGHIHDLKD---WHVGH-SIYVGIVEHGAVRKSDTAV 134 (307)
T ss_dssp CCGGGHHHHHHHTTSS-CCCEEEECCSSSHHHHHHHT---CCCSC-EEEEEEECCEEEECSSSEE
T ss_pred eCHHHHHHHHHHhhcC-CCCeEEEecCCccHHHHHHH---hCCCC-cEEEEEEeeceEECCCCEE
Confidence 9999999999999875 566677788999764 4443 34443 44433 23456655
No 121
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.69 E-value=4e-08 Score=87.28 Aligned_cols=110 Identities=7% Similarity=-0.027 Sum_probs=79.8
Q ss_pred CEEEEEcc----cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeec
Q 012479 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~----G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavp 187 (462)
++|+|||. |+||..++++|++. |++|+..+.+..+ -.|... ..++.|+.+..|++++++|
T Consensus 15 ~~IavIGaS~~~g~~G~~~~~~L~~~------G~~V~~vnp~~~~------i~G~~~----~~s~~el~~~vDlvii~vp 78 (138)
T 1y81_A 15 RKIALVGASKNPAKYGNIILKDLLSK------GFEVLPVNPNYDE------IEGLKC----YRSVRELPKDVDVIVFVVP 78 (138)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHT------TCEEEEECTTCSE------ETTEEC----BSSGGGSCTTCCEEEECSC
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHC------CCEEEEeCCCCCe------ECCeee----cCCHHHhCCCCCEEEEEeC
Confidence 89999999 99999999999998 9885444333211 157764 5688998889999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEeccchHHHhhhccccCCCCccEEecccCCCchh
Q 012479 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (462)
Q Consensus 188 d~a~~~vl~eI~~~Lk~gaiL~~a~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~ 243 (462)
++.+.++++++.. ...+.++.+++++.-...+. .-..++.+| -||+++-.
T Consensus 79 ~~~v~~v~~~~~~-~g~~~i~~~~~~~~~~l~~~---a~~~Gi~~i--gpnc~g~~ 128 (138)
T 1y81_A 79 PKVGLQVAKEAVE-AGFKKLWFQPGAESEEIRRF---LEKAGVEYS--FGRCIMVE 128 (138)
T ss_dssp HHHHHHHHHHHHH-TTCCEEEECTTSCCHHHHHH---HHHHTCEEE--CSCCHHHH
T ss_pred HHHHHHHHHHHHH-cCCCEEEEcCccHHHHHHHH---HHHCCCEEE--cCCcceEE
Confidence 9999999998766 45566777777764222111 112356665 49988765
No 122
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.64 E-value=1.6e-08 Score=98.93 Aligned_cols=96 Identities=15% Similarity=0.091 Sum_probs=72.0
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEee
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLav 186 (462)
.++| ++|+|||+|.||.+++.+|.+. |.+|.+.+|+.++..+.+.+.|+.. ..+..++++++|+||++|
T Consensus 126 ~~~~-~~v~iiGaG~~g~aia~~L~~~------g~~V~v~~r~~~~~~~l~~~~g~~~----~~~~~~~~~~aDiVi~at 194 (275)
T 2hk9_A 126 EVKE-KSILVLGAGGASRAVIYALVKE------GAKVFLWNRTKEKAIKLAQKFPLEV----VNSPEEVIDKVQVIVNTT 194 (275)
T ss_dssp TGGG-SEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSHHHHHHHTTTSCEEE----CSCGGGTGGGCSEEEECS
T ss_pred CcCC-CEEEEECchHHHHHHHHHHHHc------CCEEEEEECCHHHHHHHHHHcCCee----ehhHHhhhcCCCEEEEeC
Confidence 4678 9999999999999999999998 8888887776544445555556553 347788899999999999
Q ss_pred cchhHHHHHHHH-HhcCCCCcEEEEecc
Q 012479 187 SDAAQADNYEKI-FSCMKPNSILGLSHG 213 (462)
Q Consensus 187 pd~a~~~vl~eI-~~~Lk~gaiL~~a~G 213 (462)
|+....++...+ .+.+++|++|+++..
T Consensus 195 p~~~~~~~~~~i~~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 195 SVGLKDEDPEIFNYDLIKKDHVVVDIIY 222 (275)
T ss_dssp STTSSTTCCCSSCGGGCCTTSEEEESSS
T ss_pred CCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence 988653211112 356788988877655
No 123
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.64 E-value=1.2e-08 Score=105.14 Aligned_cols=139 Identities=15% Similarity=0.108 Sum_probs=93.5
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEe
Q 012479 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLa 185 (462)
..+.| ++|||||+|+||.++|+.|+.. |++|+++++.. .. ...|.. ..+.+|++++||+|+++
T Consensus 112 ~~l~g-~tvGIIGlG~IG~~vA~~l~~~------G~~V~~~d~~~----~~-~~~g~~-----~~~l~ell~~aDvV~l~ 174 (380)
T 2o4c_A 112 ADLAE-RTYGVVGAGQVGGRLVEVLRGL------GWKVLVCDPPR----QA-REPDGE-----FVSLERLLAEADVISLH 174 (380)
T ss_dssp CCGGG-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECHHH----HH-HSTTSC-----CCCHHHHHHHCSEEEEC
T ss_pred cccCC-CEEEEEeCCHHHHHHHHHHHHC------CCEEEEEcCCh----hh-hccCcc-----cCCHHHHHHhCCEEEEe
Confidence 46889 9999999999999999999988 99987665421 11 123433 46899999999999999
Q ss_pred ecchhH-----HHHHH-HHHhcCCCCcEEEEec-cch------HHHhhhccccCCCCccEEecccCCCchhhHHhhhcCc
Q 012479 186 ISDAAQ-----ADNYE-KIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGK 252 (462)
Q Consensus 186 vpd~a~-----~~vl~-eI~~~Lk~gaiL~~a~-G~~------i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~ 252 (462)
+|.... ..++. ++.+.||+|++|+.++ |-. +..+.+..+ .....||....|. |... ++.
T Consensus 175 ~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i-~~A~LDV~~~EP~-~~~~---l~~--- 246 (380)
T 2o4c_A 175 TPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGAD-LEVALDVWEGEPQ-ADPE---LAA--- 246 (380)
T ss_dssp CCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCC-EEEEESCCTTTTS-CCHH---HHT---
T ss_pred ccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCC-ceEEeeeeccCCC-Cchh---hcc---
Confidence 997664 45554 6788999999988665 321 112222111 1234677777783 3322 332
Q ss_pred cccCCCceEEEeecc-CCCHHHHH
Q 012479 253 EINGAGINSSFAVHQ-DVDGRATN 275 (462)
Q Consensus 253 ~~~G~Gv~aliav~q-d~tgea~e 275 (462)
.+.+++||- ..|.+..+
T Consensus 247 ------~nvi~TPHiag~t~e~~~ 264 (380)
T 2o4c_A 247 ------RCLIATPHIAGYSLEGKL 264 (380)
T ss_dssp ------TCSEECSSCTTCCHHHHH
T ss_pred ------CCEEEccccCcCCHHHHH
Confidence 366789986 45555433
No 124
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=98.61 E-value=1.6e-08 Score=104.33 Aligned_cols=150 Identities=16% Similarity=0.138 Sum_probs=98.4
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEe
Q 012479 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLa 185 (462)
..+.| ++|||||+|+||.++|+.|+.. |++|+++++. .+. ...+.. ..+.+|++++||+|+++
T Consensus 115 ~~l~g-ktvGIIGlG~IG~~vA~~l~a~------G~~V~~~d~~----~~~-~~~~~~-----~~sl~ell~~aDiV~l~ 177 (381)
T 3oet_A 115 FSLRD-RTIGIVGVGNVGSRLQTRLEAL------GIRTLLCDPP----RAA-RGDEGD-----FRTLDELVQEADVLTFH 177 (381)
T ss_dssp CCGGG-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECHH----HHH-TTCCSC-----BCCHHHHHHHCSEEEEC
T ss_pred CccCC-CEEEEEeECHHHHHHHHHHHHC------CCEEEEECCC----hHH-hccCcc-----cCCHHHHHhhCCEEEEc
Confidence 46789 9999999999999999999988 9998766542 111 112322 56899999999999999
Q ss_pred ecchhH-----HHHHH-HHHhcCCCCcEEEEec-cch------HHHhhhccccCCCCccEEecccCCCchhhHHhhhcCc
Q 012479 186 ISDAAQ-----ADNYE-KIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGK 252 (462)
Q Consensus 186 vpd~a~-----~~vl~-eI~~~Lk~gaiL~~a~-G~~------i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf~~G~ 252 (462)
+|.... ..++. +....||+|++|+.++ |-. +..+++.. ......||.--.|. |.. .++.
T Consensus 178 ~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~-i~gA~LDV~e~EP~-~~~---~L~~--- 249 (381)
T 3oet_A 178 TPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQ-PLSVVLDVWEGEPD-LNV---ALLE--- 249 (381)
T ss_dssp CCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTC-CEEEEESCCTTTTS-CCH---HHHH---
T ss_pred CcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCC-CeEEEeeccccCCC-Ccc---hhhh---
Confidence 996543 34553 6778899999998776 321 12222211 11235677777774 322 2443
Q ss_pred cccCCCceEEEeecc-CCCHHHHHH-----HHHHHHHhCC
Q 012479 253 EINGAGINSSFAVHQ-DVDGRATNV-----ALGWSVALGS 286 (462)
Q Consensus 253 ~~~G~Gv~aliav~q-d~tgea~e~-----a~al~~aiG~ 286 (462)
.+.+++||- ..|.++.+. +..+..-++.
T Consensus 250 ------~~~i~TPHiag~t~e~~~~~~~~~~~~l~~~l~~ 283 (381)
T 3oet_A 250 ------AVDIGTSHIAGYTLEGKARGTTQVFEAYSAFIGR 283 (381)
T ss_dssp ------HSSEECSSCTTCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred ------CCEEECCccCcCcHHHHHHHHHHHHHHHHHHHcC
Confidence 235688887 455555443 3445555654
No 125
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=98.59 E-value=2.7e-06 Score=84.48 Aligned_cols=181 Identities=16% Similarity=0.199 Sum_probs=132.7
Q ss_pred HcCceecCCCcCCHhhhhccCCeEEEeecchh-HHHHHHHHHhcCCCCcEEEEeccch---HH-HhhhccccCCCCccEE
Q 012479 159 AAGFTEENGTLGDIYETISGSDLVLLLISDAA-QADNYEKIFSCMKPNSILGLSHGFL---LG-HLQSMGLDFPKNIGVI 233 (462)
Q Consensus 159 ~~G~~~~d~~~~~~~eav~~ADvViLavpd~a-~~~vl~eI~~~Lk~gaiL~~a~G~~---i~-~~~~~~i~~p~~v~VV 233 (462)
+.|+.+ +.|..|+++++|++|+=+|-.. +.++.++|.+++++|++|+.++=++ +. .++. .. ++|+.|.
T Consensus 126 daGVkV----tsDD~EAvk~AEi~IlftPfG~~t~~Iakkii~~lpEgAII~nTCTipp~~ly~~le~--l~-R~DvgIs 198 (358)
T 2b0j_A 126 DVGLKV----TSDDREAVEGADIVITWLPKGNKQPDIIKKFADAIPEGAIVTHACTIPTTKFAKIFKD--LG-REDLNIT 198 (358)
T ss_dssp GGTCEE----ESCHHHHHTTCSEEEECCTTCTTHHHHHHHHGGGSCTTCEEEECSSSCHHHHHHHHHH--TT-CTTSEEE
T ss_pred HcCcEe----ecchHHHhcCCCEEEEecCCCCCcHHHHHHHHhhCcCCCEEecccCCCHHHHHHHHHH--hC-cccCCee
Confidence 368876 6788899999999999999766 8899999999999999999887653 22 2222 23 7899999
Q ss_pred ecccCC-CchhhHHhhhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCC-cccccchhhhccccchhhhHhHHh
Q 012479 234 AVCPKG-MGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP-FTFATTLEQEYRSDIFGERGILLG 311 (462)
Q Consensus 234 ~v~Png-pg~~vr~lf~~G~~~~G~Gv~aliav~qd~tgea~e~a~al~~aiG~~-~viettf~~E~~~dlfgeqtvL~G 311 (462)
..||-+ |+.. |-.. +. ..-+++++++....|++..|.. +++ ..|+.+..+-++-
T Consensus 199 S~HPaaVPgt~--------------Gq~~-~g-~~yAtEEqIeklveLaksa~k~ay~v--------PAdl~SpV~DMgs 254 (358)
T 2b0j_A 199 SYHPGCVPEMK--------------GQVY-IA-EGYASEEAVNKLYEIGKIARGKAFKM--------PANLIGPVCDMCS 254 (358)
T ss_dssp ECBCSSCTTTC--------------CCEE-EE-ESSSCHHHHHHHHHHHHHHHSCEEEE--------EHHHHHHHHSTTH
T ss_pred ccCCCCCCCCC--------------Cccc-cc-cccCCHHHHHHHHHHHHHhCCCeEec--------chhhccchhhhHH
Confidence 999953 4432 3333 33 5678999999999999999975 222 2234444444433
Q ss_pred HHHH----HHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHhcCCcchhhhchh
Q 012479 312 AVHG----IVESLFRRFTE-NGMNEDLAYKNTVECITGIISKIISTQGMLAVYNSFSGEDKKEFEKA 373 (462)
Q Consensus 312 ~~pa----liea~~d~~v~-~G~~~e~A~~~~~e~i~Gli~~li~e~G~~~m~~~vs~~~~aeyg~~ 373 (462)
.+.+ .+..-++...+ .|-|.+++-+.+.+++.. ++.|+...|+..|.+.+.. .+--+.+
T Consensus 255 ~vTAv~~AGiL~Y~~~vtkIlgAP~~mie~q~~esL~t-iasLve~~GI~gm~k~LnP--~aL~~sA 318 (358)
T 2b0j_A 255 AVTATVYAGLLAYRDAVTKILGAPADFAQMMADEALTQ-IHNLMKEKGIANMEEALDP--AALLGTA 318 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHH-HHHHHHHHCGGGHHHHSCG--GGGGGTG
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH-HHHHHHHhhHHHHHHhcCH--HHHHhHH
Confidence 4444 34444555544 599999999999999995 9999999999999999874 3334443
No 126
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=98.57 E-value=6.4e-08 Score=97.96 Aligned_cols=104 Identities=19% Similarity=0.114 Sum_probs=77.4
Q ss_pred eecCcccccc--cccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCC
Q 012479 94 VRGGRDLFNL--LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD 171 (462)
Q Consensus 94 ~~~~~~~f~~--~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~ 171 (462)
++.|+|.... ....+.| ++|||||+|.+|..+|+.++.. |.+|+++++... +...+.|+. ..+
T Consensus 123 ~~~~~~~~~~~~~~~~l~g-~tvGIiG~G~IG~~va~~~~~f------g~~v~~~d~~~~---~~~~~~~~~-----~~~ 187 (334)
T 3kb6_A 123 VKKLNFSQDSEILARELNR-LTLGVIGTGRIGSRVAMYGLAF------GMKVLCYDVVKR---EDLKEKGCV-----YTS 187 (334)
T ss_dssp HHTTCCCCCGGGCBCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCC---HHHHHTTCE-----ECC
T ss_pred ccccccccccccccceecC-cEEEEECcchHHHHHHHhhccc------CceeeecCCccc---hhhhhcCce-----ecC
Confidence 4455553322 2478899 9999999999999999999987 999876654422 233445665 468
Q ss_pred HhhhhccCCeEEEeecchhH-HHHHH-HHHhcCCCCcEEEEec
Q 012479 172 IYETISGSDLVLLLISDAAQ-ADNYE-KIFSCMKPNSILGLSH 212 (462)
Q Consensus 172 ~~eav~~ADvViLavpd~a~-~~vl~-eI~~~Lk~gaiL~~a~ 212 (462)
.+|++++||+|++++|-... ..++. +.+..||+|++|+-++
T Consensus 188 l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~a 230 (334)
T 3kb6_A 188 LDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTA 230 (334)
T ss_dssp HHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECS
T ss_pred HHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecC
Confidence 99999999999999996544 44564 5778899999887554
No 127
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.56 E-value=8.7e-08 Score=85.64 Aligned_cols=112 Identities=10% Similarity=0.008 Sum_probs=78.6
Q ss_pred CEEEEEcc----cchHHHHHHHHHHhhhhhcCCcEEEEEecCCc-hhHHHHHHcCceecCCCcCCHhhhhccCCeEEEee
Q 012479 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (462)
Q Consensus 112 kkIgIIG~----G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~-~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLav 186 (462)
++|+|||+ |+||..++++|++. |++|+..+.... +. -.|... ..++.|+.+..|++++++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~------G~~v~~vnp~~~g~~-----i~G~~~----~~sl~el~~~~Dlvii~v 78 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQ------GYHVIPVSPKVAGKT-----LLGQQG----YATLADVPEKVDMVDVFR 78 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHH------TCCEEEECSSSTTSE-----ETTEEC----CSSTTTCSSCCSEEECCS
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHC------CCEEEEeCCcccccc-----cCCeec----cCCHHHcCCCCCEEEEEe
Confidence 88999999 89999999999999 888554443320 11 147764 567888888999999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEeccchHHHhhhccccCCCCccEEecccCCCchhh
Q 012479 187 SDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSV 244 (462)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~gaiL~~a~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~v 244 (462)
|+....++++++.. ...+.++.+.+.+.-...+. .-..++.++ .||+++-..
T Consensus 79 p~~~v~~v~~~~~~-~g~~~i~i~~~~~~~~l~~~---a~~~Gi~~i--gpnc~g~~~ 130 (145)
T 2duw_A 79 NSEAAWGVAQEAIA-IGAKTLWLQLGVINEQAAVL---AREAGLSVV--MDRCPAIEL 130 (145)
T ss_dssp CSTHHHHHHHHHHH-HTCCEEECCTTCCCHHHHHH---HHTTTCEEE--CSCCHHHHS
T ss_pred CHHHHHHHHHHHHH-cCCCEEEEcCChHHHHHHHH---HHHcCCEEE--cCCeeeEEc
Confidence 99999999998766 44556666665553211111 113456665 499988663
No 128
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.56 E-value=5.4e-07 Score=76.76 Aligned_cols=96 Identities=14% Similarity=0.043 Sum_probs=65.3
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHH-HcCceecCCCcCCHh----hhhccCCeEEEee
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AAGFTEENGTLGDIY----ETISGSDLVLLLI 186 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~-~~G~~~~d~~~~~~~----eav~~ADvViLav 186 (462)
++|.|||+|.+|..+++.|.+. |++|++.++...+ .+... ..|+....+...+.+ ..++++|+||+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~------g~~v~~~d~~~~~-~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~ 77 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK------GHDIVLIDIDKDI-CKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVT 77 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCHHH-HHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHHH-HHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEee
Confidence 7999999999999999999998 8888777665333 33333 346531111112222 2267899999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEeccc
Q 012479 187 SDAAQADNYEKIFSCMKPNSILGLSHGF 214 (462)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~gaiL~~a~G~ 214 (462)
|+......+.++.+.++++.+|..+.+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~ 105 (140)
T 1lss_A 78 GKEEVNLMSSLLAKSYGINKTIARISEI 105 (140)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEECSST
T ss_pred CCchHHHHHHHHHHHcCCCEEEEEecCH
Confidence 9886665555666667777777655543
No 129
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=98.55 E-value=1.7e-07 Score=92.32 Aligned_cols=94 Identities=17% Similarity=0.251 Sum_probs=70.9
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEe
Q 012479 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLa 185 (462)
..++| ++|+|||+|.||.++|+.|+.. |.+|++.++... ..+.+.+.|+... ...+.+++++++|+|+++
T Consensus 151 ~~l~g-~~v~IiG~G~iG~~~a~~l~~~------G~~V~~~dr~~~-~~~~~~~~g~~~~--~~~~l~~~l~~aDvVi~~ 220 (293)
T 3d4o_A 151 FTIHG-ANVAVLGLGRVGMSVARKFAAL------GAKVKVGARESD-LLARIAEMGMEPF--HISKAAQELRDVDVCINT 220 (293)
T ss_dssp SCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSHH-HHHHHHHTTSEEE--EGGGHHHHTTTCSEEEEC
T ss_pred CCCCC-CEEEEEeeCHHHHHHHHHHHhC------CCEEEEEECCHH-HHHHHHHCCCeec--ChhhHHHHhcCCCEEEEC
Confidence 46789 9999999999999999999988 888887776533 3344556676520 024677889999999999
Q ss_pred ecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 186 ISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 186 vpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
+|+..+.+ +....|++|.+|++++
T Consensus 221 ~p~~~i~~---~~l~~mk~~~~lin~a 244 (293)
T 3d4o_A 221 IPALVVTA---NVLAEMPSHTFVIDLA 244 (293)
T ss_dssp CSSCCBCH---HHHHHSCTTCEEEECS
T ss_pred CChHHhCH---HHHHhcCCCCEEEEec
Confidence 99854422 3455789999988776
No 130
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.54 E-value=4.2e-08 Score=103.92 Aligned_cols=101 Identities=17% Similarity=0.167 Sum_probs=76.8
Q ss_pred ccccccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhcc
Q 012479 99 DLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISG 178 (462)
Q Consensus 99 ~~f~~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ 178 (462)
|..... ..+.| ++|+|||+|.||.++|+.|+.. |.+|++.++. ......+...|+. ..++++++++
T Consensus 247 w~r~~~-~~l~G-ktVgIIG~G~IG~~vA~~l~~~------G~~Viv~d~~-~~~~~~a~~~g~~-----~~~l~ell~~ 312 (479)
T 1v8b_A 247 LMRATD-FLISG-KIVVICGYGDVGKGCASSMKGL------GARVYITEID-PICAIQAVMEGFN-----VVTLDEIVDK 312 (479)
T ss_dssp HHHHHC-CCCTT-SEEEEECCSHHHHHHHHHHHHH------TCEEEEECSC-HHHHHHHHTTTCE-----ECCHHHHTTT
T ss_pred hhhccc-cccCC-CEEEEEeeCHHHHHHHHHHHhC------cCEEEEEeCC-hhhHHHHHHcCCE-----ecCHHHHHhc
Confidence 754332 47899 9999999999999999999988 9988776654 3333356667886 4689999999
Q ss_pred CCeEEEeecchhHHHHH-HHHHhcCCCCcEEEEeccchH
Q 012479 179 SDLVLLLISDAAQADNY-EKIFSCMKPNSILGLSHGFLL 216 (462)
Q Consensus 179 ADvViLavpd~a~~~vl-~eI~~~Lk~gaiL~~a~G~~i 216 (462)
||+|++++.. ..++ .+....||+|++|+.++-+.+
T Consensus 313 aDiVi~~~~t---~~lI~~~~l~~MK~gailiNvgrg~~ 348 (479)
T 1v8b_A 313 GDFFITCTGN---VDVIKLEHLLKMKNNAVVGNIGHFDD 348 (479)
T ss_dssp CSEEEECCSS---SSSBCHHHHTTCCTTCEEEECSSTTT
T ss_pred CCEEEECCCh---hhhcCHHHHhhcCCCcEEEEeCCCCc
Confidence 9999999732 2334 367788999999987765433
No 131
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=98.53 E-value=2.3e-07 Score=91.57 Aligned_cols=94 Identities=21% Similarity=0.344 Sum_probs=71.3
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEe
Q 012479 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLa 185 (462)
..++| ++|+|||+|.||.++|+.|+.. |.+|++.++... ..+.+.+.|+... ...+.++++++||+|+++
T Consensus 153 ~~l~g-~~v~IiG~G~iG~~~a~~l~~~------G~~V~~~d~~~~-~~~~~~~~g~~~~--~~~~l~~~l~~aDvVi~~ 222 (300)
T 2rir_A 153 YTIHG-SQVAVLGLGRTGMTIARTFAAL------GANVKVGARSSA-HLARITEMGLVPF--HTDELKEHVKDIDICINT 222 (300)
T ss_dssp SCSTT-SEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSHH-HHHHHHHTTCEEE--EGGGHHHHSTTCSEEEEC
T ss_pred CCCCC-CEEEEEcccHHHHHHHHHHHHC------CCEEEEEECCHH-HHHHHHHCCCeEE--chhhHHHHhhCCCEEEEC
Confidence 57889 9999999999999999999988 888887776533 3344445676420 024678899999999999
Q ss_pred ecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 186 ISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 186 vpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
+|+..+. ++....|++|.+|++++
T Consensus 223 ~p~~~i~---~~~~~~mk~g~~lin~a 246 (300)
T 2rir_A 223 IPSMILN---QTVLSSMTPKTLILDLA 246 (300)
T ss_dssp CSSCCBC---HHHHTTSCTTCEEEECS
T ss_pred CChhhhC---HHHHHhCCCCCEEEEEe
Confidence 9985432 24567899999888765
No 132
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=98.52 E-value=5.5e-07 Score=93.13 Aligned_cols=97 Identities=15% Similarity=0.225 Sum_probs=70.5
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc--------EEEEEecCCc---hhHHHHH-Hc--------CceecC--CCc
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--------VVKVGLRKGS---RSFAEAR-AA--------GFTEEN--GTL 169 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~--------~Vivg~r~~~---~s~~~A~-~~--------G~~~~d--~~~ 169 (462)
.||+|||.|+.|.|+|.-|.++ |. +|.+|.|+.+ +...... .. |+...+ ..+
T Consensus 35 ~KI~ViGaGsWGTALA~~la~n------g~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t 108 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAEN------CKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVAN 108 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH------HHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHHc------CCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEe
Confidence 4899999999999999999887 43 4777766533 1111111 11 121100 014
Q ss_pred CCHhhhhccCCeEEEeecchhHHHHHHHHHhcCCCCcEE-EEeccc
Q 012479 170 GDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSIL-GLSHGF 214 (462)
Q Consensus 170 ~~~~eav~~ADvViLavpd~a~~~vl~eI~~~Lk~gaiL-~~a~G~ 214 (462)
.|+++++++||+||+++|.+...++++++.++++++..| +.+-|+
T Consensus 109 ~dl~~al~~ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 109 PDLIDSVKDVDIIVFNIPHQFLPRICSQLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp SCHHHHHTTCSEEEECSCGGGHHHHHHHHTTTSCTTCEEEECCCSC
T ss_pred CCHHHHHhcCCEEEEECChhhhHHHHHHhccccCCCceeEEecccc
Confidence 678999999999999999999999999999999999864 455676
No 133
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=98.51 E-value=4.5e-06 Score=92.73 Aligned_cols=212 Identities=13% Similarity=0.123 Sum_probs=136.0
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHH-----------cCceec-C-----CCcCC
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----------AGFTEE-N-----GTLGD 171 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~-----------~G~~~~-d-----~~~~~ 171 (462)
+.++||+|||.|.||..||..+..+ |++|++.+.. .+..+.+.+ .+.... + -...+
T Consensus 314 ~~i~~v~ViGaG~MG~gIA~~~a~a------G~~V~l~D~~-~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~ 386 (742)
T 3zwc_A 314 QPVSSVGVLGLGTMGRGIAISFARV------GISVVAVESD-PKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSS 386 (742)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTT------TCEEEEECSS-HHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEES
T ss_pred ccccEEEEEcccHHHHHHHHHHHhC------CCchhcccch-HhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccC
Confidence 3468999999999999999999998 9998876654 322222221 110000 0 00123
Q ss_pred HhhhhccCCeEEEeecchhH--HHHHHHHHhcCCCCcEEE-EeccchHHHhhhccccCCCCccEEecccCCCchhhHHhh
Q 012479 172 IYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLY 248 (462)
Q Consensus 172 ~~eav~~ADvViLavpd~a~--~~vl~eI~~~Lk~gaiL~-~a~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf 248 (462)
..+.+++||+||=+++-..- .+++.+|.++++++++|. -++++.+..+.. .....-+|+..|+--|.+..+
T Consensus 387 ~~~~l~~aDlVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSsl~i~~ia~---~~~~p~r~ig~HFfnP~~~m~--- 460 (742)
T 3zwc_A 387 STKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIAS---STDRPQLVIGTHFFSPAHVMR--- 460 (742)
T ss_dssp CGGGGGSCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHT---TSSCGGGEEEEECCSSTTTCC---
T ss_pred cHHHHhhCCEEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCcCChHHHHh---hcCCccccccccccCCCCCCc---
Confidence 34568899999999996555 369999999999999874 677888877654 222334799999988877621
Q ss_pred hcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhhHhHHh--HHHHHHHHHHHHHHH
Q 012479 249 VQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLG--AVHGIVESLFRRFTE 326 (462)
Q Consensus 249 ~~G~~~~G~Gv~aliav~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeqtvL~G--~~paliea~~d~~v~ 326 (462)
.-= |.++...+++.++.+.++.+.+|.+.|+ . .+ +.-| +.+ ..|.+-|++ .+++
T Consensus 461 ----------LVE-vi~g~~Ts~e~~~~~~~~~~~lgK~pV~-v---kd--~pGF-----i~NRi~~~~~~ea~--~l~~ 516 (742)
T 3zwc_A 461 ----------LLE-VIPSRYSSPTTIATVMSLSKKIGKIGVV-V---GN--CYGF-----VGNRMLAPYYNQGF--FLLE 516 (742)
T ss_dssp ----------EEE-EEECSSCCHHHHHHHHHHHHHTTCEEEE-C---CC--STTT-----THHHHHHHHHHHHH--HHHH
T ss_pred ----------eEE-EecCCCCCHHHHHHHHHHHHHhCCCCcc-c---CC--CCCc-----cHHHHhhHHHHHHH--HHHH
Confidence 122 4568889999999999999999975322 1 11 1112 212 122344444 3677
Q ss_pred cCCCHHHHHHHHHHHH---HHHHHHHHHHhcHHHHH
Q 012479 327 NGMNEDLAYKNTVECI---TGIISKIISTQGMLAVY 359 (462)
Q Consensus 327 ~G~~~e~A~~~~~e~i---~Gli~~li~e~G~~~m~ 359 (462)
.|.++++--... ..+ .| --.|+-.-|++.++
T Consensus 517 eG~~~~~id~a~-~~~G~pmG-Pf~l~D~vGlDv~~ 550 (742)
T 3zwc_A 517 EGSKPEDVDGVL-EEFGFKMG-PFRVSDLAGLDVGW 550 (742)
T ss_dssp TTCCHHHHHHHH-HHHTCSSC-HHHHHHHHCHHHHH
T ss_pred cCCCHHHHHHHH-HHcCCCCC-hHHHHHHhCHHHHH
Confidence 888887655422 221 14 34556666775443
No 134
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=98.50 E-value=4.8e-08 Score=103.85 Aligned_cols=100 Identities=18% Similarity=0.116 Sum_probs=75.9
Q ss_pred ccccccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhcc
Q 012479 99 DLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISG 178 (462)
Q Consensus 99 ~~f~~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ 178 (462)
|..... ..+.| ++|+|||+|.+|.++|+.|+.. |.+|++.++.. .....+...|+. ..++++++++
T Consensus 267 w~~~~g-~~L~G-ktVgIIG~G~IG~~vA~~l~~~------G~~V~v~d~~~-~~~~~a~~~G~~-----~~~l~ell~~ 332 (494)
T 3d64_A 267 IKRATD-VMIAG-KIAVVAGYGDVGKGCAQSLRGL------GATVWVTEIDP-ICALQAAMEGYR-----VVTMEYAADK 332 (494)
T ss_dssp HHHHHC-CCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECSCH-HHHHHHHTTTCE-----ECCHHHHTTT
T ss_pred hhhccc-cccCC-CEEEEEccCHHHHHHHHHHHHC------CCEEEEEeCCh-HhHHHHHHcCCE-----eCCHHHHHhc
Confidence 654333 57899 9999999999999999999987 99987766543 323345566876 4689999999
Q ss_pred CCeEEEeecchhHHHHH-HHHHhcCCCCcEEEEeccch
Q 012479 179 SDLVLLLISDAAQADNY-EKIFSCMKPNSILGLSHGFL 215 (462)
Q Consensus 179 ADvViLavpd~a~~~vl-~eI~~~Lk~gaiL~~a~G~~ 215 (462)
||+|++++.. ..++ ++....||+|++|+.++-+.
T Consensus 333 aDiVi~~~~t---~~lI~~~~l~~MK~gAilINvgrg~ 367 (494)
T 3d64_A 333 ADIFVTATGN---YHVINHDHMKAMRHNAIVCNIGHFD 367 (494)
T ss_dssp CSEEEECSSS---SCSBCHHHHHHCCTTEEEEECSSSS
T ss_pred CCEEEECCCc---ccccCHHHHhhCCCCcEEEEcCCCc
Confidence 9999999832 2334 36778899999998776443
No 135
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.50 E-value=5.2e-08 Score=85.48 Aligned_cols=89 Identities=20% Similarity=0.165 Sum_probs=67.4
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecch
Q 012479 110 GINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (462)
Q Consensus 110 gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~ 189 (462)
| ++|+|||+|.||.++++.|+.. |++|+++.|..++..+.+++.|.... ...+..++++++|+||.++|..
T Consensus 21 ~-~~v~iiG~G~iG~~~a~~l~~~------g~~v~v~~r~~~~~~~~a~~~~~~~~--~~~~~~~~~~~~Divi~at~~~ 91 (144)
T 3oj0_A 21 G-NKILLVGNGMLASEIAPYFSYP------QYKVTVAGRNIDHVRAFAEKYEYEYV--LINDIDSLIKNNDVIITATSSK 91 (144)
T ss_dssp C-CEEEEECCSHHHHHHGGGCCTT------TCEEEEEESCHHHHHHHHHHHTCEEE--ECSCHHHHHHTCSEEEECSCCS
T ss_pred C-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEcCCHHHHHHHHHHhCCceE--eecCHHHHhcCCCEEEEeCCCC
Confidence 6 9999999999999999999987 88877777765555566777775421 1467888999999999999976
Q ss_pred hHHHHHHHHHhcCCCCcEEEEe
Q 012479 190 AQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 190 a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
.. ++. ...+++|.++++.
T Consensus 92 ~~--~~~--~~~l~~g~~vid~ 109 (144)
T 3oj0_A 92 TP--IVE--ERSLMPGKLFIDL 109 (144)
T ss_dssp SC--SBC--GGGCCTTCEEEEC
T ss_pred Cc--Eee--HHHcCCCCEEEEc
Confidence 21 111 2457788877765
No 136
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.50 E-value=1.3e-07 Score=94.26 Aligned_cols=91 Identities=12% Similarity=0.146 Sum_probs=68.6
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHHcC--ceecCCCcCCHhhhhccCCeEEEeecc
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAG--FTEENGTLGDIYETISGSDLVLLLISD 188 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~~G--~~~~d~~~~~~~eav~~ADvViLavpd 188 (462)
++|+|||+|.||.+++.+|.+. .|+ +|.+++|..++..+.+++.+ +.. +.+.+++++++|+|+++||.
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~-----~g~~~V~v~dr~~~~~~~l~~~~~~~~~~----~~~~~e~v~~aDiVi~atp~ 206 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQ-----FSFKEVRIWNRTKENAEKFADTVQGEVRV----CSSVQEAVAGADVIITVTLA 206 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----CCCSEEEEECSSHHHHHHHHHHSSSCCEE----CSSHHHHHTTCSEEEECCCC
T ss_pred cEEEEECCcHHHHHHHHHHHHh-----CCCcEEEEEcCCHHHHHHHHHHhhCCeEE----eCCHHHHHhcCCEEEEEeCC
Confidence 8999999999999999999864 155 77777776555555666656 553 56889999999999999995
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEeccch
Q 012479 189 AAQADNYEKIFSCMKPNSILGLSHGFL 215 (462)
Q Consensus 189 ~a~~~vl~eI~~~Lk~gaiL~~a~G~~ 215 (462)
. ..++.. +.+++|++|.+++++.
T Consensus 207 ~--~~v~~~--~~l~~g~~vi~~g~~~ 229 (312)
T 2i99_A 207 T--EPILFG--EWVKPGAHINAVGASR 229 (312)
T ss_dssp S--SCCBCG--GGSCTTCEEEECCCCS
T ss_pred C--CcccCH--HHcCCCcEEEeCCCCC
Confidence 2 233322 5789999888776553
No 137
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=98.48 E-value=1e-08 Score=100.76 Aligned_cols=97 Identities=12% Similarity=0.138 Sum_probs=71.5
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhh-ccCCeEEEeecchh
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLLISDAA 190 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav-~~ADvViLavpd~a 190 (462)
+||+|||.|+||.++|..|.++ |.+|.+..|.... .+.....|... .....+..+++ +.+|+||++||+.+
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~------g~~V~~~~r~~~~-~~~~~~~g~~~-~~~~~~~~~~~~~~~D~vilavk~~~ 74 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS------LPHTTLIGRHAKT-ITYYTVPHAPA-QDIVVKGYEDVTNTFDVIIIAVKTHQ 74 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH------CTTCEEEESSCEE-EEEESSTTSCC-EEEEEEEGGGCCSCEEEEEECSCGGG
T ss_pred cEEEEECCCHHHHHHHHHHHHC------CCeEEEEEeccCc-EEEEecCCeec-cceecCchHhcCCCCCEEEEeCCccC
Confidence 7999999999999999999998 8888877776332 11112234210 00012344554 88999999999999
Q ss_pred HHHHHHHHHhcCCCCcE-EEEeccchH
Q 012479 191 QADNYEKIFSCMKPNSI-LGLSHGFLL 216 (462)
Q Consensus 191 ~~~vl~eI~~~Lk~gai-L~~a~G~~i 216 (462)
..++++++.|+++++++ |++..|+..
T Consensus 75 ~~~~l~~l~~~l~~~~~iv~~~nGi~~ 101 (294)
T 3g17_A 75 LDAVIPHLTYLAHEDTLIILAQNGYGQ 101 (294)
T ss_dssp HHHHGGGHHHHEEEEEEEEECCSSCCC
T ss_pred HHHHHHHHHHhhCCCCEEEEeccCccc
Confidence 99999999999988875 567788864
No 138
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.44 E-value=2.5e-07 Score=96.83 Aligned_cols=92 Identities=16% Similarity=0.182 Sum_probs=72.5
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEe
Q 012479 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLa 185 (462)
..+.| ++|+|||+|.+|.++|+.|+.. |.+|++.++. +.....|...|+. ..+++|++++||+|+++
T Consensus 207 ~~L~G-ktVgIiG~G~IG~~vA~~Lka~------Ga~Viv~D~~-p~~a~~A~~~G~~-----~~sL~eal~~ADVVilt 273 (436)
T 3h9u_A 207 VMIAG-KTACVCGYGDVGKGCAAALRGF------GARVVVTEVD-PINALQAAMEGYQ-----VLLVEDVVEEAHIFVTT 273 (436)
T ss_dssp CCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCE-----ECCHHHHTTTCSEEEEC
T ss_pred CcccC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEECCC-hhhhHHHHHhCCe-----ecCHHHHHhhCCEEEEC
Confidence 56789 9999999999999999999998 9988765543 4445566778887 46899999999999986
Q ss_pred ecchhHHHHHH-HHHhcCCCCcEEEEecc
Q 012479 186 ISDAAQADNYE-KIFSCMKPNSILGLSHG 213 (462)
Q Consensus 186 vpd~a~~~vl~-eI~~~Lk~gaiL~~a~G 213 (462)
..... ++. +....||+|++|+.++-
T Consensus 274 ~gt~~---iI~~e~l~~MK~gAIVINvgR 299 (436)
T 3h9u_A 274 TGNDD---IITSEHFPRMRDDAIVCNIGH 299 (436)
T ss_dssp SSCSC---SBCTTTGGGCCTTEEEEECSS
T ss_pred CCCcC---ccCHHHHhhcCCCcEEEEeCC
Confidence 65432 233 56788999999886653
No 139
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.43 E-value=1.5e-07 Score=90.86 Aligned_cols=90 Identities=19% Similarity=0.134 Sum_probs=68.1
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEee
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLav 186 (462)
.++| +|+|||+|.||.+++.+|.+. |.+|.+.+|+.++..+.+.+.|.. ..+.+++ +++|+||+++
T Consensus 114 ~l~~--~v~iiG~G~~g~~~a~~l~~~------g~~v~v~~r~~~~~~~l~~~~~~~-----~~~~~~~-~~~Divi~~t 179 (263)
T 2d5c_A 114 PLKG--PALVLGAGGAGRAVAFALREA------GLEVWVWNRTPQRALALAEEFGLR-----AVPLEKA-REARLLVNAT 179 (263)
T ss_dssp CCCS--CEEEECCSHHHHHHHHHHHHT------TCCEEEECSSHHHHHHHHHHHTCE-----ECCGGGG-GGCSEEEECS
T ss_pred CCCC--eEEEECCcHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHhccc-----hhhHhhc-cCCCEEEEcc
Confidence 3566 899999999999999999988 888888777655545566666654 3467788 9999999999
Q ss_pred cchhHHH---HHHHHHhcCCCCcEEEEec
Q 012479 187 SDAAQAD---NYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 187 pd~a~~~---vl~eI~~~Lk~gaiL~~a~ 212 (462)
|+..+.. ++. .+.+++|++|+++.
T Consensus 180 p~~~~~~~~~~l~--~~~l~~g~~viD~~ 206 (263)
T 2d5c_A 180 RVGLEDPSASPLP--AELFPEEGAAVDLV 206 (263)
T ss_dssp STTTTCTTCCSSC--GGGSCSSSEEEESC
T ss_pred CCCCCCCCCCCCC--HHHcCCCCEEEEee
Confidence 9886532 222 45688888877654
No 140
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.31 E-value=1.2e-06 Score=91.97 Aligned_cols=94 Identities=24% Similarity=0.255 Sum_probs=74.0
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEe
Q 012479 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLa 185 (462)
..+.| ++|+|||+|.+|..+|+.++.. |.+|++..+. +.....+...|+. +.+.+|++++||+|+++
T Consensus 243 ~~L~G-KTVgVIG~G~IGr~vA~~lraf------Ga~Viv~d~d-p~~a~~A~~~G~~-----vv~LeElL~~ADIVv~a 309 (464)
T 3n58_A 243 VMMAG-KVAVVCGYGDVGKGSAQSLAGA------GARVKVTEVD-PICALQAAMDGFE-----VVTLDDAASTADIVVTT 309 (464)
T ss_dssp CCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSS-HHHHHHHHHTTCE-----ECCHHHHGGGCSEEEEC
T ss_pred CcccC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEEeCC-cchhhHHHhcCce-----eccHHHHHhhCCEEEEC
Confidence 46889 9999999999999999999988 9998776554 3334556678887 46899999999999998
Q ss_pred ecchhHHHHH-HHHHhcCCCCcEEEEeccch
Q 012479 186 ISDAAQADNY-EKIFSCMKPNSILGLSHGFL 215 (462)
Q Consensus 186 vpd~a~~~vl-~eI~~~Lk~gaiL~~a~G~~ 215 (462)
+... .++ .+.+..||+|++|+.++-+.
T Consensus 310 tgt~---~lI~~e~l~~MK~GAILINvGRgd 337 (464)
T 3n58_A 310 TGNK---DVITIDHMRKMKDMCIVGNIGHFD 337 (464)
T ss_dssp CSSS---SSBCHHHHHHSCTTEEEEECSSST
T ss_pred CCCc---cccCHHHHhcCCCCeEEEEcCCCC
Confidence 7532 344 36777899999988766554
No 141
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.30 E-value=1.9e-06 Score=85.27 Aligned_cols=95 Identities=15% Similarity=0.119 Sum_probs=63.9
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCC--cEEEEEecCCchhHHHHHHcC---------ceecCCCcCCHhhhhccC
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSD--IVVKVGLRKGSRSFAEARAAG---------FTEENGTLGDIYETISGS 179 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G--~~Vivg~r~~~~s~~~A~~~G---------~~~~d~~~~~~~eav~~A 179 (462)
|+||+|||.|+||.++|..|..+ | .+|++.++..++....+.+.+ +.. ...+. +++++|
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~------g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~d~-~~~~~a 70 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQ------GVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNI---VINDW-AALADA 70 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEE---EESCG-GGGTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEE---EeCCH-HHhCCC
Confidence 47999999999999999999988 7 577776665433333333221 111 02455 788999
Q ss_pred CeEEEeecchhH--------------------HHHHHHHHhcCCCCcE-EEEeccchH
Q 012479 180 DLVLLLISDAAQ--------------------ADNYEKIFSCMKPNSI-LGLSHGFLL 216 (462)
Q Consensus 180 DvViLavpd~a~--------------------~~vl~eI~~~Lk~gai-L~~a~G~~i 216 (462)
|+||+++|+... .++++++.++. ++.+ |..+-+..+
T Consensus 71 DvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~~ 127 (309)
T 1hyh_A 71 DVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVLVVISNPVDV 127 (309)
T ss_dssp SEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT-CCSEEEECSSSHHH
T ss_pred CEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCcHHH
Confidence 999999997653 46666777765 4554 445545543
No 142
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.27 E-value=8.5e-07 Score=92.77 Aligned_cols=93 Identities=23% Similarity=0.248 Sum_probs=72.3
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEe
Q 012479 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLa 185 (462)
..+.| ++|+|||+|.+|.++|+.|+.. |.+|++.++. +.....|...|+. +.+.++++++||+|+++
T Consensus 216 ~~L~G-ktV~ViG~G~IGk~vA~~Lra~------Ga~Viv~D~d-p~ra~~A~~~G~~-----v~~Leeal~~ADIVi~a 282 (435)
T 3gvp_A 216 MMFGG-KQVVVCGYGEVGKGCCAALKAM------GSIVYVTEID-PICALQACMDGFR-----LVKLNEVIRQVDIVITC 282 (435)
T ss_dssp CCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCE-----ECCHHHHTTTCSEEEEC
T ss_pred ceecC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEEeCC-hhhhHHHHHcCCE-----eccHHHHHhcCCEEEEC
Confidence 46789 9999999999999999999988 9988776554 3334567778886 46899999999999997
Q ss_pred ecchhHHHHHH-HHHhcCCCCcEEEEeccc
Q 012479 186 ISDAAQADNYE-KIFSCMKPNSILGLSHGF 214 (462)
Q Consensus 186 vpd~a~~~vl~-eI~~~Lk~gaiL~~a~G~ 214 (462)
+- ...++. +....||+|.+|+.++-+
T Consensus 283 tg---t~~lI~~e~l~~MK~gailINvgrg 309 (435)
T 3gvp_A 283 TG---NKNVVTREHLDRMKNSCIVCNMGHS 309 (435)
T ss_dssp SS---CSCSBCHHHHHHSCTTEEEEECSST
T ss_pred CC---CcccCCHHHHHhcCCCcEEEEecCC
Confidence 32 223454 667789999988866533
No 143
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=98.27 E-value=1.5e-06 Score=86.98 Aligned_cols=119 Identities=13% Similarity=0.146 Sum_probs=84.7
Q ss_pred CEEEEE-cc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhc--cCCeEEEeec
Q 012479 112 NQIGVI-GW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLIS 187 (462)
Q Consensus 112 kkIgII-G~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~--~ADvViLavp 187 (462)
++|+|| |+ |++|..++++|++. |+++++..++.... .+-.|+.. ..+++|+.+ ..|++++++|
T Consensus 14 ~siaVV~Gasg~~G~~~~~~l~~~------G~~~v~~VnP~~~g---~~i~G~~v----y~sl~el~~~~~vD~avI~vP 80 (305)
T 2fp4_A 14 NTKVICQGFTGKQGTFHSQQALEY------GTNLVGGTTPGKGG---KTHLGLPV----FNTVKEAKEQTGATASVIYVP 80 (305)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH------TCEEEEEECTTCTT---CEETTEEE----ESSHHHHHHHHCCCEEEECCC
T ss_pred CcEEEEECCCCCHHHHHHHHHHHC------CCcEEEEeCCCcCc---ceECCeee----echHHHhhhcCCCCEEEEecC
Confidence 889999 98 99999999999999 99865555543211 01257765 568999888 8999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEeccchHHHhhhccccCCCCc-cEEecccCCCchhhH
Q 012479 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNI-GVIAVCPKGMGPSVR 245 (462)
Q Consensus 188 d~a~~~vl~eI~~~Lk~gaiL~~a~G~~i~~~~~~~i~~p~~v-~VV~v~Pngpg~~vr 245 (462)
++.+.++++++... .-+.+|.+++|+..+...+ .....+.. .+..+.||+||....
T Consensus 81 ~~~~~~~~~e~i~~-Gi~~iv~~t~G~~~~~~~~-l~~~a~~~~gi~liGPnc~Gii~p 137 (305)
T 2fp4_A 81 PPFAAAAINEAIDA-EVPLVVCITEGIPQQDMVR-VKHRLLRQGKTRLIGPNCPGVINP 137 (305)
T ss_dssp HHHHHHHHHHHHHT-TCSEEEECCCCCCHHHHHH-HHHHHTTCSSCEEECSSSCEEEET
T ss_pred HHHHHHHHHHHHHC-CCCEEEEECCCCChHHHHH-HHHHHHhcCCcEEEeCCCCeEecc
Confidence 99999999985542 2245688999997543111 11222333 455577999988754
No 144
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=98.26 E-value=1.9e-06 Score=91.59 Aligned_cols=92 Identities=22% Similarity=0.316 Sum_probs=73.7
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEee
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLav 186 (462)
.+.| ++|+|||+|.+|..+|+.++.. |.+|++.++ +....+.|.+.|+. +.+.+++++++|+|++++
T Consensus 271 ~l~G-ktV~IiG~G~IG~~~A~~lka~------Ga~Viv~d~-~~~~~~~A~~~Ga~-----~~~l~e~l~~aDvVi~at 337 (494)
T 3ce6_A 271 LIGG-KKVLICGYGDVGKGCAEAMKGQ------GARVSVTEI-DPINALQAMMEGFD-----VVTVEEAIGDADIVVTAT 337 (494)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECS-CHHHHHHHHHTTCE-----ECCHHHHGGGCSEEEECS
T ss_pred CCCc-CEEEEEccCHHHHHHHHHHHHC------CCEEEEEeC-CHHHHHHHHHcCCE-----EecHHHHHhCCCEEEECC
Confidence 5788 9999999999999999999988 888766554 44556678888986 357888999999999999
Q ss_pred cchhHHHHHH-HHHhcCCCCcEEEEeccc
Q 012479 187 SDAAQADNYE-KIFSCMKPNSILGLSHGF 214 (462)
Q Consensus 187 pd~a~~~vl~-eI~~~Lk~gaiL~~a~G~ 214 (462)
+... ++. +....|++|.+|+.++-+
T Consensus 338 gt~~---~i~~~~l~~mk~ggilvnvG~~ 363 (494)
T 3ce6_A 338 GNKD---IIMLEHIKAMKDHAILGNIGHF 363 (494)
T ss_dssp SSSC---SBCHHHHHHSCTTCEEEECSSS
T ss_pred CCHH---HHHHHHHHhcCCCcEEEEeCCC
Confidence 8654 233 566779999998877654
No 145
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.24 E-value=1.6e-06 Score=82.27 Aligned_cols=79 Identities=24% Similarity=0.244 Sum_probs=58.5
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhh-ccCCeEEEeecchh
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLLISDAA 190 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav-~~ADvViLavpd~a 190 (462)
+||||||+|.||..++++|.+. |++++...+.+.+. ++ . ..+.++++ .++|+|++++|+..
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~------g~~lv~v~d~~~~~----~~---~-----~~~~~~l~~~~~DvVv~~~~~~~ 62 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERN------GFEIAAILDVRGEH----EK---M-----VRGIDEFLQREMDVAVEAASQQA 62 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEECSSCCC----TT---E-----ESSHHHHTTSCCSEEEECSCHHH
T ss_pred CEEEEECCCHHHHHHHHHHhcC------CCEEEEEEecCcch----hh---h-----cCCHHHHhcCCCCEEEECCCHHH
Confidence 5899999999999999999977 88874333333321 11 2 46888888 69999999999998
Q ss_pred HHHHHHHHHhcCCCCcEEEEe
Q 012479 191 QADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 191 ~~~vl~eI~~~Lk~gaiL~~a 211 (462)
+.+++... ++.|+.|.+.
T Consensus 63 ~~~~~~~~---l~~G~~vv~~ 80 (236)
T 2dc1_A 63 VKDYAEKI---LKAGIDLIVL 80 (236)
T ss_dssp HHHHHHHH---HHTTCEEEES
T ss_pred HHHHHHHH---HHCCCcEEEE
Confidence 88877543 4567765544
No 146
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.22 E-value=9.9e-07 Score=89.72 Aligned_cols=95 Identities=19% Similarity=0.178 Sum_probs=68.1
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCC-cEEEEEecCCchhHHHHHHc----CceecCCCcCCHhhhhccCCeEEEee
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAA----GFTEENGTLGDIYETISGSDLVLLLI 186 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G-~~Vivg~r~~~~s~~~A~~~----G~~~~d~~~~~~~eav~~ADvViLav 186 (462)
++|+|||+|.||.+++++|.... + .+|.+++|..++..+.+++. |+.. ..+.+.+++++++|+|+++|
T Consensus 130 ~~v~iIGaG~~a~~~a~al~~~~-----~~~~V~V~~r~~~~a~~la~~~~~~~g~~~--~~~~~~~eav~~aDiVi~aT 202 (350)
T 1x7d_A 130 RKMALIGNGAQSEFQALAFHKHL-----GIEEIVAYDTDPLATAKLIANLKEYSGLTI--RRASSVAEAVKGVDIITTVT 202 (350)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHS-----CCCEEEEECSSHHHHHHHHHHHTTCTTCEE--EECSSHHHHHTTCSEEEECC
T ss_pred CeEEEECCcHHHHHHHHHHHHhC-----CCcEEEEEcCCHHHHHHHHHHHHhccCceE--EEeCCHHHHHhcCCEEEEec
Confidence 89999999999999999986530 3 36778877756555555553 5321 01568899999999999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEeccch
Q 012479 187 SDAAQADNYEKIFSCMKPNSILGLSHGFL 215 (462)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~gaiL~~a~G~~ 215 (462)
|......++. ...+++|++|...+.+.
T Consensus 203 ps~~~~pvl~--~~~l~~G~~V~~vgs~~ 229 (350)
T 1x7d_A 203 ADKAYATIIT--PDMLEPGMHLNAVGGDC 229 (350)
T ss_dssp CCSSEEEEEC--GGGCCTTCEEEECSCCB
T ss_pred cCCCCCceec--HHHcCCCCEEEECCCCC
Confidence 9864222332 25688999888777653
No 147
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=98.22 E-value=2.3e-06 Score=84.67 Aligned_cols=117 Identities=15% Similarity=0.201 Sum_probs=80.2
Q ss_pred CEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhc--cCCeEEEeecc
Q 012479 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (462)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~--~ADvViLavpd 188 (462)
.||+|||+ |.||..++++|++. |++++...++..... +..|+.. ..+++|+.+ +.|++++++|+
T Consensus 8 ~rVaViG~sG~~G~~~~~~l~~~------g~~~V~~V~p~~~g~---~~~G~~v----y~sl~el~~~~~~D~viI~tP~ 74 (288)
T 2nu8_A 8 TKVICQGFTGSQGTFHSEQAIAY------GTKMVGGVTPGKGGT---THLGLPV----FNTVREAVAATGATASVIYVPA 74 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH------TCEEEEEECTTCTTC---EETTEEE----ESSHHHHHHHHCCCEEEECCCG
T ss_pred CEEEEECCCChHHHHHHHHHHHC------CCeEEEEeCCCcccc---eeCCeec----cCCHHHHhhcCCCCEEEEecCH
Confidence 78999999 99999999999998 888655554421100 1357664 568899887 89999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEeccchHHHhhhccccCCCCccEEecccCCCchh
Q 012479 189 AAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (462)
Q Consensus 189 ~a~~~vl~eI~~~Lk~gaiL~~a~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~ 243 (462)
..+.+++.+.... ....+|.++.|+......+ .....+...+..+.||++|..
T Consensus 75 ~~~~~~~~ea~~~-Gi~~iVi~t~G~~~~~~~~-l~~~A~~~gv~liGPNc~Gi~ 127 (288)
T 2nu8_A 75 PFCKDSILEAIDA-GIKLIITITEGIPTLDMLT-VKVKLDEAGVRMIGPNTPGVI 127 (288)
T ss_dssp GGHHHHHHHHHHT-TCSEEEECCCCCCHHHHHH-HHHHHHHHTCEEECSSCCEEE
T ss_pred HHHHHHHHHHHHC-CCCEEEEECCCCCHHHHHH-HHHHHHHcCCEEEecCCccee
Confidence 9999999886543 2233567888996543211 011112233444679987765
No 148
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.21 E-value=3.5e-06 Score=83.97 Aligned_cols=80 Identities=18% Similarity=0.167 Sum_probs=61.3
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCC-chhHHHHHHcCceecCCCcCCHhhhhc--cCCeEEEeecc
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~-~~s~~~A~~~G~~~~d~~~~~~~eav~--~ADvViLavpd 188 (462)
.||||||+|+||..++.+|++. .+++++...+.+ ++..+.+.+.|... ..+.+++++ +.|+|++++|+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~g~~~----~~~~~~~l~~~~~D~V~i~tp~ 75 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAAN-----PDLELVVIADPFIEGAQRLAEANGAEA----VASPDEVFARDDIDGIVIGSPT 75 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-----TTEEEEEEECSSHHHHHHHHHTTTCEE----ESSHHHHTTCSCCCEEEECSCG
T ss_pred eEEEEECCcHHHHHHHHHHHhC-----CCcEEEEEECCCHHHHHHHHHHcCCce----eCCHHHHhcCCCCCEEEEeCCc
Confidence 6899999999999999999875 156665334443 34445566678654 678999998 89999999999
Q ss_pred hhHHHHHHHHHh
Q 012479 189 AAQADNYEKIFS 200 (462)
Q Consensus 189 ~a~~~vl~eI~~ 200 (462)
..+.++......
T Consensus 76 ~~h~~~~~~al~ 87 (344)
T 3euw_A 76 STHVDLITRAVE 87 (344)
T ss_dssp GGHHHHHHHHHH
T ss_pred hhhHHHHHHHHH
Confidence 999988776543
No 149
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=98.21 E-value=2.2e-06 Score=84.92 Aligned_cols=118 Identities=14% Similarity=0.195 Sum_probs=81.2
Q ss_pred CEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhc--cCCeEEEeecc
Q 012479 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (462)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~--~ADvViLavpd 188 (462)
+||+|+|+ |.||..+++++++. |++++....+..... +..|+.. ..+++|+.+ .+|++++++|+
T Consensus 8 ~~VaVvGasG~~G~~~~~~l~~~------g~~~v~~VnP~~~g~---~i~G~~v----y~sl~el~~~~~~Dv~Ii~vp~ 74 (288)
T 1oi7_A 8 TRVLVQGITGREGQFHTKQMLTY------GTKIVAGVTPGKGGM---EVLGVPV----YDTVKEAVAHHEVDASIIFVPA 74 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH------TCEEEEEECTTCTTC---EETTEEE----ESSHHHHHHHSCCSEEEECCCH
T ss_pred CEEEEECCCCCHHHHHHHHHHHc------CCeEEEEECCCCCCc---eECCEEe----eCCHHHHhhcCCCCEEEEecCH
Confidence 78999998 99999999999998 888655555432100 1357765 568899888 89999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEeccchHHHhhhccccCCCCccEEecccCCCchhh
Q 012479 189 AAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSV 244 (462)
Q Consensus 189 ~a~~~vl~eI~~~Lk~gaiL~~a~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~v 244 (462)
..+.+++++.... .-..+|.++.||......+ .....++..+..+.||++|-..
T Consensus 75 ~~~~~~~~ea~~~-Gi~~vVi~t~G~~~~~~~~-l~~~a~~~gi~vigPNc~Gii~ 128 (288)
T 1oi7_A 75 PAAADAALEAAHA-GIPLIVLITEGIPTLDMVR-AVEEIKALGSRLIGGNCPGIIS 128 (288)
T ss_dssp HHHHHHHHHHHHT-TCSEEEECCSCCCHHHHHH-HHHHHHHHTCEEEESSSCEEEE
T ss_pred HHHHHHHHHHHHC-CCCEEEEECCCCCHHHHHH-HHHHHHHcCCEEEeCCCCeEEc
Confidence 9999999986543 2234677899996532111 1111122334455688776553
No 150
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.19 E-value=2.6e-06 Score=83.59 Aligned_cols=79 Identities=14% Similarity=0.096 Sum_probs=61.1
Q ss_pred CEEEEEcccchHHH-HHHHHHHhhhhhcCCcEEE-EEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecch
Q 012479 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (462)
Q Consensus 112 kkIgIIG~G~mG~A-iA~~Lrds~~~~g~G~~Vi-vg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~ 189 (462)
.||||||+|.||.. ++.+|++. .+++++ +.++..++..+.+++.|+.. ..+.++++++.|+|++++|+.
T Consensus 7 ~~igiIG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~~~~~----~~~~~~ll~~~D~V~i~tp~~ 77 (308)
T 3uuw_A 7 IKMGMIGLGSIAQKAYLPILTKS-----ERFEFVGAFTPNKVKREKICSDYRIMP----FDSIESLAKKCDCIFLHSSTE 77 (308)
T ss_dssp CEEEEECCSHHHHHHTHHHHTSC-----SSSEEEEEECSCHHHHHHHHHHHTCCB----CSCHHHHHTTCSEEEECCCGG
T ss_pred CcEEEEecCHHHHHHHHHHHHhC-----CCeEEEEEECCCHHHHHHHHHHcCCCC----cCCHHHHHhcCCEEEEeCCcH
Confidence 68999999999996 88888764 156666 44444444455666778763 678999999999999999999
Q ss_pred hHHHHHHHHH
Q 012479 190 AQADNYEKIF 199 (462)
Q Consensus 190 a~~~vl~eI~ 199 (462)
.+.++.....
T Consensus 78 ~h~~~~~~al 87 (308)
T 3uuw_A 78 THYEIIKILL 87 (308)
T ss_dssp GHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 9998877654
No 151
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.18 E-value=6.7e-06 Score=73.15 Aligned_cols=121 Identities=10% Similarity=0.061 Sum_probs=80.7
Q ss_pred cccCCCCEEEEEcc----cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCe
Q 012479 106 DAFNGINQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDL 181 (462)
Q Consensus 106 ~~l~gikkIgIIG~----G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADv 181 (462)
..|+..++|+|||. |.+|..++++|++. |++| +......+ .-.|... ..++.|+....|+
T Consensus 17 ~ll~~p~~iaVVGas~~~g~~G~~~~~~l~~~------G~~v-~~Vnp~~~-----~i~G~~~----y~sl~~l~~~vDl 80 (144)
T 2d59_A 17 EILTRYKKIALVGASPKPERDANIVMKYLLEH------GYDV-YPVNPKYE-----EVLGRKC----YPSVLDIPDKIEV 80 (144)
T ss_dssp HHHHHCCEEEEETCCSCTTSHHHHHHHHHHHT------TCEE-EEECTTCS-----EETTEEC----BSSGGGCSSCCSE
T ss_pred HHHcCCCEEEEEccCCCCCchHHHHHHHHHHC------CCEE-EEECCCCC-----eECCeec----cCCHHHcCCCCCE
Confidence 34531289999999 79999999999998 8874 33332211 1246664 5678888888999
Q ss_pred EEEeecchhHHHHHHHHHhcCCCCcEEEEeccchHHHhhhccccCCCCccEEecccCCCchhhHHhh
Q 012479 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLY 248 (462)
Q Consensus 182 ViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf 248 (462)
+++++|+..+.++++++...-. +.+ .+..|+.-..+.+ ..-..++++++ ||+++-...+++
T Consensus 81 vvi~vp~~~~~~vv~~~~~~gi-~~i-~~~~g~~~~~l~~--~a~~~Gi~vvG--pnc~gv~~~~~~ 141 (144)
T 2d59_A 81 VDLFVKPKLTMEYVEQAIKKGA-KVV-WFQYNTYNREASK--KADEAGLIIVA--NRCMMREHERLL 141 (144)
T ss_dssp EEECSCHHHHHHHHHHHHHHTC-SEE-EECTTCCCHHHHH--HHHHTTCEEEE--SCCHHHHHHHHH
T ss_pred EEEEeCHHHHHHHHHHHHHcCC-CEE-EECCCchHHHHHH--HHHHcCCEEEc--CCchhhcchhhc
Confidence 9999999999999988665432 234 4556653111111 01124566654 999988876665
No 152
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.16 E-value=4.4e-06 Score=82.78 Aligned_cols=78 Identities=21% Similarity=0.212 Sum_probs=60.3
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEE-EecCCchhHHHHHHcCceecCCCcCCHhhhhc--cCCeEEEeecc
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Viv-g~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~--~ADvViLavpd 188 (462)
.||||||+|.||..++.+|++. .+++++. .++..++..+.+.+.|+. ..+.+++++ +.|+|++++|+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~D~V~i~tp~ 73 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGN-----ADARLVAVADAFPAAAEAIAGAYGCE-----VRTIDAIEAAADIDAVVICTPT 73 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-----TTEEEEEEECSSHHHHHHHHHHTTCE-----ECCHHHHHHCTTCCEEEECSCG
T ss_pred eEEEEECCCHHHHHHHHHHhhC-----CCcEEEEEECCCHHHHHHHHHHhCCC-----cCCHHHHhcCCCCCEEEEeCCc
Confidence 6899999999999999999875 1566653 344434444556667765 478999987 89999999999
Q ss_pred hhHHHHHHHHH
Q 012479 189 AAQADNYEKIF 199 (462)
Q Consensus 189 ~a~~~vl~eI~ 199 (462)
..+.++.....
T Consensus 74 ~~h~~~~~~al 84 (331)
T 4hkt_A 74 DTHADLIERFA 84 (331)
T ss_dssp GGHHHHHHHHH
T ss_pred hhHHHHHHHHH
Confidence 99998877654
No 153
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.16 E-value=5.1e-06 Score=82.64 Aligned_cols=80 Identities=14% Similarity=0.151 Sum_probs=61.1
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEE-EecCCchhHHHHHHcCceecCCCcCCHhhhhc--cCCeEEEeecc
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Viv-g~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~--~ADvViLavpd 188 (462)
.||||||+|.||..++.+|++. .+++++. .++..++..+.+.+.|+.. ...+.+++++ +.|+|++++|+
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~~~D~V~i~tp~ 77 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRES-----AQAEVRGIASRRLENAQKMAKELAIPV---AYGSYEELCKDETIDIIYIPTYN 77 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHS-----SSEEEEEEBCSSSHHHHHHHHHTTCCC---CBSSHHHHHHCTTCSEEEECCCG
T ss_pred EEEEEECchHHHHHHHHHHHhC-----CCcEEEEEEeCCHHHHHHHHHHcCCCc---eeCCHHHHhcCCCCCEEEEcCCC
Confidence 5899999999999999999885 1566653 3444445556667777731 1578999987 79999999999
Q ss_pred hhHHHHHHHHH
Q 012479 189 AAQADNYEKIF 199 (462)
Q Consensus 189 ~a~~~vl~eI~ 199 (462)
..+.++.....
T Consensus 78 ~~h~~~~~~al 88 (330)
T 3e9m_A 78 QGHYSAAKLAL 88 (330)
T ss_dssp GGHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99988877543
No 154
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.16 E-value=4.5e-06 Score=83.55 Aligned_cols=80 Identities=10% Similarity=0.098 Sum_probs=61.1
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEec-CCchhHHHHHHcCceecCCCcCCHhhhhc--cCCeEEEeecc
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR-KGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r-~~~~s~~~A~~~G~~~~d~~~~~~~eav~--~ADvViLavpd 188 (462)
.||||||+|.||..++.+|++.. .+++++...+ ..++..+.+++.|+.. ..+.+|+++ +.|+|++++|+
T Consensus 14 ~rvgiiG~G~~g~~~~~~l~~~~----~~~~lvav~d~~~~~~~~~~~~~~~~~----~~~~~~ll~~~~~D~V~i~tp~ 85 (354)
T 3q2i_A 14 IRFALVGCGRIANNHFGALEKHA----DRAELIDVCDIDPAALKAAVERTGARG----HASLTDMLAQTDADIVILTTPS 85 (354)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTT----TTEEEEEEECSSHHHHHHHHHHHCCEE----ESCHHHHHHHCCCSEEEECSCG
T ss_pred ceEEEEcCcHHHHHHHHHHHhCC----CCeEEEEEEcCCHHHHHHHHHHcCCce----eCCHHHHhcCCCCCEEEECCCc
Confidence 68999999999999999998751 1566654444 4344445566778764 678999987 79999999999
Q ss_pred hhHHHHHHHHH
Q 012479 189 AAQADNYEKIF 199 (462)
Q Consensus 189 ~a~~~vl~eI~ 199 (462)
..+.++..+..
T Consensus 86 ~~h~~~~~~al 96 (354)
T 3q2i_A 86 GLHPTQSIECS 96 (354)
T ss_dssp GGHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99988876543
No 155
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.12 E-value=2.7e-06 Score=87.77 Aligned_cols=98 Identities=13% Similarity=0.083 Sum_probs=71.3
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecC---------CC---------
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN---------GT--------- 168 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d---------~~--------- 168 (462)
-+++ .||+|||+|.+|...++.++.. |.+|++.+++ ....+.+.+.|....+ +.
T Consensus 181 ~v~~-~kV~ViG~G~iG~~aa~~a~~l------Ga~V~v~D~~-~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~ 252 (381)
T 3p2y_A 181 TVKP-ASALVLGVGVAGLQALATAKRL------GAKTTGYDVR-PEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAER 252 (381)
T ss_dssp EECC-CEEEEESCSHHHHHHHHHHHHH------TCEEEEECSS-GGGHHHHHHTTCEECCCC-------------CHHHH
T ss_pred CcCC-CEEEEECchHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCeEEeccccccccccchhhhhHHHH
Confidence 3467 8999999999999999999988 9888776665 4446677777764210 00
Q ss_pred ---cCCHhhhhccCCeEEEee--cchhHHHHH-HHHHhcCCCCcEEEEec
Q 012479 169 ---LGDIYETISGSDLVLLLI--SDAAQADNY-EKIFSCMKPNSILGLSH 212 (462)
Q Consensus 169 ---~~~~~eav~~ADvViLav--pd~a~~~vl-~eI~~~Lk~gaiL~~a~ 212 (462)
..+++++++++|+||.++ |......++ ++....||+|.+|++++
T Consensus 253 ~~~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 253 AQQQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred hhhHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEe
Confidence 114568899999999886 433333333 57888899999999886
No 156
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.12 E-value=3.1e-06 Score=84.80 Aligned_cols=91 Identities=15% Similarity=0.210 Sum_probs=67.3
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHH----cCceecCCCcCCHhhhhccCCeEEEee
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA----AGFTEENGTLGDIYETISGSDLVLLLI 186 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~----~G~~~~d~~~~~~~eav~~ADvViLav 186 (462)
++|+|||+|.||.+++++|+... ++ +|.+++|. +..+.+++ .|+... .+ +.++++++||+|++||
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~~-----~~~~V~v~~r~--~a~~la~~l~~~~g~~~~--~~-~~~eav~~aDIVi~aT 191 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSARF-----ALEAILVHDPY--ASPEILERIGRRCGVPAR--MA-APADIAAQADIVVTAT 191 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHS-----CCCEEEEECTT--CCHHHHHHHHHHHTSCEE--EC-CHHHHHHHCSEEEECC
T ss_pred cEEEEECccHHHHHHHHHHHHhC-----CCcEEEEECCc--HHHHHHHHHHHhcCCeEE--Ee-CHHHHHhhCCEEEEcc
Confidence 89999999999999999998740 33 67777777 44555443 465321 14 8999999999999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEeccchH
Q 012479 187 SDAAQADNYEKIFSCMKPNSILGLSHGFLL 216 (462)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~gaiL~~a~G~~i 216 (462)
|... .++. .+.++||++|++++.+..
T Consensus 192 ~s~~--pvl~--~~~l~~G~~V~~vGs~~p 217 (313)
T 3hdj_A 192 RSTT--PLFA--GQALRAGAFVGAIGSSLP 217 (313)
T ss_dssp CCSS--CSSC--GGGCCTTCEEEECCCSST
T ss_pred CCCC--cccC--HHHcCCCcEEEECCCCCC
Confidence 9752 2332 356899999998887643
No 157
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.11 E-value=1.2e-05 Score=71.13 Aligned_cols=102 Identities=15% Similarity=0.090 Sum_probs=64.1
Q ss_pred cccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHH-HcCceecCCCcCC---Hhhh-hcc
Q 012479 104 LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AAGFTEENGTLGD---IYET-ISG 178 (462)
Q Consensus 104 ~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~-~~G~~~~d~~~~~---~~ea-v~~ 178 (462)
.++...+ ++|.|||+|.+|..+++.|+.. |.+|++..+...+ .+.+. ..|.....+...+ ..++ +++
T Consensus 13 ~~~~~~~-~~v~IiG~G~iG~~la~~L~~~------g~~V~vid~~~~~-~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ 84 (155)
T 2g1u_A 13 MSKKQKS-KYIVIFGCGRLGSLIANLASSS------GHSVVVVDKNEYA-FHRLNSEFSGFTVVGDAAEFETLKECGMEK 84 (155)
T ss_dssp ----CCC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCGGG-GGGSCTTCCSEEEESCTTSHHHHHTTTGGG
T ss_pred hhcccCC-CcEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHHH-HHHHHhcCCCcEEEecCCCHHHHHHcCccc
Confidence 3577788 9999999999999999999998 9888777665433 34444 4564321111122 2233 678
Q ss_pred CCeEEEeecchhHHHHHHHHHhcCCCCc-EEEEecc
Q 012479 179 SDLVLLLISDAAQADNYEKIFSCMKPNS-ILGLSHG 213 (462)
Q Consensus 179 ADvViLavpd~a~~~vl~eI~~~Lk~ga-iL~~a~G 213 (462)
+|+||+++++......+..+...+.+.. ++..+.+
T Consensus 85 ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~ 120 (155)
T 2g1u_A 85 ADMVFAFTNDDSTNFFISMNARYMFNVENVIARVYD 120 (155)
T ss_dssp CSEEEECSSCHHHHHHHHHHHHHTSCCSEEEEECSS
T ss_pred CCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 9999999998776665555555443333 3444433
No 158
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.11 E-value=4.3e-06 Score=83.41 Aligned_cols=80 Identities=25% Similarity=0.265 Sum_probs=60.0
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEE-EecCCchhHHHHHHcCceecCCCcCCHhhhhc--cCCeEEEeecc
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Viv-g~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~--~ADvViLavpd 188 (462)
.||||||+|+||..++.+|++. .+++++. .++..++..+.+++.|+.. ...+.+++++ +.|+|++++|+
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~~~D~V~i~tp~ 74 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMI-----DDAILYAISDVREDRLREMKEKLGVEK---AYKDPHELIEDPNVDAVLVCSST 74 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGS-----TTEEEEEEECSCHHHHHHHHHHHTCSE---EESSHHHHHHCTTCCEEEECSCG
T ss_pred eEEEEEcCCHHHHHHHHHHHhC-----CCcEEEEEECCCHHHHHHHHHHhCCCc---eeCCHHHHhcCCCCCEEEEcCCC
Confidence 5899999999999999999874 1566653 3444344445566677631 1578999988 89999999999
Q ss_pred hhHHHHHHHHH
Q 012479 189 AAQADNYEKIF 199 (462)
Q Consensus 189 ~a~~~vl~eI~ 199 (462)
..+.++..+..
T Consensus 75 ~~h~~~~~~al 85 (344)
T 3ezy_A 75 NTHSELVIACA 85 (344)
T ss_dssp GGHHHHHHHHH
T ss_pred cchHHHHHHHH
Confidence 99988777543
No 159
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.10 E-value=6.4e-06 Score=82.12 Aligned_cols=85 Identities=16% Similarity=0.129 Sum_probs=62.5
Q ss_pred CEEEEEcccchHHHHHHHHH-HhhhhhcCCcEEEEE-ecCCchhHHHHHHcCc--eecCCCcCCHhhhhcc--CCeEEEe
Q 012479 112 NQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVKVG-LRKGSRSFAEARAAGF--TEENGTLGDIYETISG--SDLVLLL 185 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr-ds~~~~g~G~~Vivg-~r~~~~s~~~A~~~G~--~~~d~~~~~~~eav~~--ADvViLa 185 (462)
.||||||+|.||..++.+|+ .. . +++++.. ++..++..+.+++.|+ .. ..+.++++++ .|+|+++
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~-~----~~~l~av~d~~~~~~~~~~~~~g~~~~~----~~~~~~ll~~~~~D~V~i~ 73 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKL-S----GAEIVAVTDVNQEAAQKVVEQYQLNATV----YPNDDSLLADENVDAVLVT 73 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTC-S----SEEEEEEECSSHHHHHHHHHHTTCCCEE----ESSHHHHHHCTTCCEEEEC
T ss_pred EEEEEECccHHHHHHHHHHHhhC-C----CcEEEEEEcCCHHHHHHHHHHhCCCCee----eCCHHHHhcCCCCCEEEEC
Confidence 58999999999999999998 42 1 5666533 4443444556677783 33 6789999876 8999999
Q ss_pred ecchhHHHHHHHHHhcCCCCcEE
Q 012479 186 ISDAAQADNYEKIFSCMKPNSIL 208 (462)
Q Consensus 186 vpd~a~~~vl~eI~~~Lk~gaiL 208 (462)
+|+..+.++..... +.|+.|
T Consensus 74 tp~~~h~~~~~~al---~~Gk~v 93 (344)
T 3mz0_A 74 SWGPAHESSVLKAI---KAQKYV 93 (344)
T ss_dssp SCGGGHHHHHHHHH---HTTCEE
T ss_pred CCchhHHHHHHHHH---HCCCcE
Confidence 99999988877543 345543
No 160
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.07 E-value=8.9e-06 Score=72.18 Aligned_cols=117 Identities=14% Similarity=0.085 Sum_probs=77.8
Q ss_pred CEEEEEcc----cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeec
Q 012479 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~----G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavp 187 (462)
++|+|||. |++|..++++|++. |++|+ .... .+..+ +-.|... ..++.|+.+..|++++++|
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~------G~~v~-~vnp-~~~~~--~i~G~~~----~~sl~el~~~vDlavi~vp 79 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQ------GYRVL-PVNP-RFQGE--ELFGEEA----VASLLDLKEPVDILDVFRP 79 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHT------TCEEE-EECG-GGTTS--EETTEEC----BSSGGGCCSCCSEEEECSC
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHC------CCEEE-EeCC-CcccC--cCCCEEe----cCCHHHCCCCCCEEEEEeC
Confidence 89999999 89999999999999 98733 2222 11000 1146664 5678888888999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEeccchHHHhhhccccCCCCccEEecccCCCchhhHHhh
Q 012479 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLY 248 (462)
Q Consensus 188 d~a~~~vl~eI~~~Lk~gaiL~~a~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~vr~lf 248 (462)
++...++++++...-- +.++...+.+.-...+. .-..++++|+ ||+++-...++.
T Consensus 80 ~~~~~~v~~~~~~~gi-~~i~~~~g~~~~~~~~~---a~~~Gir~vg--pnc~g~~~~~~~ 134 (140)
T 1iuk_A 80 PSALMDHLPEVLALRP-GLVWLQSGIRHPEFEKA---LKEAGIPVVA--DRCLMVEHKRLF 134 (140)
T ss_dssp HHHHTTTHHHHHHHCC-SCEEECTTCCCHHHHHH---HHHTTCCEEE--SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC-CEEEEcCCcCHHHHHHH---HHHcCCEEEc--CCccceEChhhc
Confidence 9999999988665432 34554444443211111 1124567664 999988765554
No 161
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=98.07 E-value=0.00017 Score=75.73 Aligned_cols=195 Identities=13% Similarity=0.150 Sum_probs=113.4
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHH-------------------HHHcC-ceecCCCcC
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAE-------------------ARAAG-FTEENGTLG 170 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~-------------------A~~~G-~~~~d~~~~ 170 (462)
|.+|+|||+|-+|..+|..|.+. |++|+ |.+.+++..+. +.+.| +.. +.
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~------G~~V~-g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~----tt 89 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALL------GHRVV-GYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSF----AE 89 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------TCEEE-EECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE----CS
T ss_pred CCEEEEEccCHHHHHHHHHHHhC------CCcEE-EEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeE----Ec
Confidence 37999999999999999999999 99875 66655433222 22233 221 45
Q ss_pred CHhhhhccCCeEEEeecc----------hhHHHHHHHHHhcCC---CCcEEEEec----cch--H-H-HhhhccccCCCC
Q 012479 171 DIYETISGSDLVLLLISD----------AAQADNYEKIFSCMK---PNSILGLSH----GFL--L-G-HLQSMGLDFPKN 229 (462)
Q Consensus 171 ~~~eav~~ADvViLavpd----------~a~~~vl~eI~~~Lk---~gaiL~~a~----G~~--i-~-~~~~~~i~~p~~ 229 (462)
+.++++++||++|+|||. .....+.+.|.++|+ +|++|++-+ |.. + . .+++ . ..+
T Consensus 90 ~~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~---~-~~~ 165 (444)
T 3vtf_A 90 SAEEAVAATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAE---E-AGG 165 (444)
T ss_dssp SHHHHHHTSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHT---T-TTT
T ss_pred CHHHHHhcCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHH---h-CCC
Confidence 788999999999999872 123456677888886 467776543 542 1 1 1221 1 123
Q ss_pred ccE-EecccC--CCchhhHHhhhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCcccccchhhhccccchhhh
Q 012479 230 IGV-IAVCPK--GMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGER 306 (462)
Q Consensus 230 v~V-V~v~Pn--gpg~~vr~lf~~G~~~~G~Gv~aliav~qd~tgea~e~a~al~~aiG~~~viettf~~E~~~dlfgeq 306 (462)
.+| |...|- -||..++++...- -++ +. ..++++.+.+..+.+.+.... +.|+.. +-+.-.+-+-
T Consensus 166 ~~f~v~~~PErl~eG~a~~d~~~~~---------riV-iG-~~~~~a~~~~~~ly~~~~~~~-~~~~~~-~AE~~Kl~eN 232 (444)
T 3vtf_A 166 VKFSVASNPEFLREGSALEDFFKPD---------RIV-IG-AGDERAASFLLDVYKAVDAPK-LVMKPR-EAELVKYASN 232 (444)
T ss_dssp CCCEEEECCCCCCTTSHHHHHHSCS---------CEE-EE-ESSHHHHHHHHHHTTTSCSCE-EEECHH-HHHHHHHHHH
T ss_pred CCceeecCcccccCCccccccccCC---------cEE-Ec-CCCHHHHHHHHHHHhccCCCE-EEechh-HHHHHHHHHH
Confidence 333 455564 5677777666532 212 12 124678888888888876543 233322 2222222222
Q ss_pred HhHHhHHHHHHHHHHHHHHHcCCCHHHH
Q 012479 307 GILLGAVHGIVESLFRRFTENGMNEDLA 334 (462)
Q Consensus 307 tvL~G~~paliea~~d~~v~~G~~~e~A 334 (462)
+-+ ..=-+|+..+....-+.|++..+.
T Consensus 233 ~~r-avnIa~~NEla~ice~~GiDv~eV 259 (444)
T 3vtf_A 233 VFL-ALKISFANEVGLLAKRLGVDTYRV 259 (444)
T ss_dssp HHH-HHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHH-HHHHHHHHHHHHHHHHcCCCHHHH
Confidence 211 111146677777777777775443
No 162
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.07 E-value=2.7e-05 Score=67.27 Aligned_cols=94 Identities=16% Similarity=0.053 Sum_probs=61.7
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhh---h-hccCCeEEEeec
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYE---T-ISGSDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~e---a-v~~ADvViLavp 187 (462)
++|.|+|+|.+|.++++.|.+. |++|++.++. ++..+.+.+.|+....+...+.+. + ++++|+||+++|
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~------g~~V~~id~~-~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA------GKKVLAVDKS-KEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEESC-HHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCeEEEEECC-HHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence 7899999999999999999998 9988776654 445666666776421111223221 1 468999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEec
Q 012479 188 DAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 188 d~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
+.......-..+..+....++..+.
T Consensus 80 ~~~~n~~~~~~a~~~~~~~iia~~~ 104 (141)
T 3llv_A 80 DDEFNLKILKALRSVSDVYAIVRVS 104 (141)
T ss_dssp CHHHHHHHHHHHHHHCCCCEEEEES
T ss_pred CHHHHHHHHHHHHHhCCceEEEEEc
Confidence 7655444434333333444555444
No 163
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.06 E-value=8e-06 Score=80.69 Aligned_cols=86 Identities=15% Similarity=0.114 Sum_probs=61.2
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEE-EEecCCchhHHHHHHcCceecCCCcCCHhhhh-ccCCeEEEeecc
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLLISD 188 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vi-vg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav-~~ADvViLavpd 188 (462)
+.+|||||+|.||..++.+|++. .+++++ +.++..++..+.+++.|... ...+.++++ ++.|+|++++|+
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~-----~~~~~~~v~d~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~D~V~i~tp~ 72 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTS-----GEYQLVAIYSRKLETAATFASRYQNIQ---LFDQLEVFFKSSFDLVYIASPN 72 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-----TSEEEEEEECSSHHHHHHHGGGSSSCE---EESCHHHHHTSSCSEEEECSCG
T ss_pred CeEEEEEeCCHHHHHHHHHHHhC-----CCeEEEEEEeCCHHHHHHHHHHcCCCe---EeCCHHHHhCCCCCEEEEeCCh
Confidence 36899999999999999999875 045654 33333333334555566521 156889998 789999999999
Q ss_pred hhHHHHHHHHHhcCCCCcE
Q 012479 189 AAQADNYEKIFSCMKPNSI 207 (462)
Q Consensus 189 ~a~~~vl~eI~~~Lk~gai 207 (462)
..+.++..+.. +.|+.
T Consensus 73 ~~h~~~~~~al---~~gk~ 88 (325)
T 2ho3_A 73 SLHFAQAKAAL---SAGKH 88 (325)
T ss_dssp GGHHHHHHHHH---HTTCE
T ss_pred HHHHHHHHHHH---HcCCc
Confidence 99988877643 34553
No 164
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.05 E-value=1e-05 Score=79.82 Aligned_cols=85 Identities=15% Similarity=0.175 Sum_probs=61.7
Q ss_pred CEEEEEcccchHHHH-HHHHHHhhhhhcCCcEEEEE-ecCCchhHHHHHHcCceecCCCcCCHhhhhc--cCCeEEEeec
Q 012479 112 NQIGVIGWGSQGPAQ-AQNLRDSLAEAKSDIVVKVG-LRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~G~mG~Ai-A~~Lrds~~~~g~G~~Vivg-~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~--~ADvViLavp 187 (462)
.||||||+|.||..+ +.+|++. +++++.. ++..++..+.+++.|+.. ...+.+++++ ++|+|++++|
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~------~~~~vav~d~~~~~~~~~~~~~g~~~---~~~~~~~~l~~~~~D~V~i~tp 71 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRAT------GGEVVSMMSTSAERGAAYATENGIGK---SVTSVEELVGDPDVDAVYVSTT 71 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHT------TCEEEEEECSCHHHHHHHHHHTTCSC---CBSCHHHHHTCTTCCEEEECSC
T ss_pred CeEEEEcccHHHHHhhhHHhhcC------CCeEEEEECCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEEeCC
Confidence 479999999999998 8888775 7776543 444334445566677631 1568888886 5999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEE
Q 012479 188 DAAQADNYEKIFSCMKPNSIL 208 (462)
Q Consensus 188 d~a~~~vl~eI~~~Lk~gaiL 208 (462)
+..+.++..+. |+.|+.|
T Consensus 72 ~~~h~~~~~~a---l~~Gk~v 89 (332)
T 2glx_A 72 NELHREQTLAA---IRAGKHV 89 (332)
T ss_dssp GGGHHHHHHHH---HHTTCEE
T ss_pred hhHhHHHHHHH---HHCCCeE
Confidence 99998877754 3456643
No 165
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.04 E-value=1.1e-05 Score=80.39 Aligned_cols=93 Identities=22% Similarity=0.280 Sum_probs=60.4
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc--EEEEEecCCchhHHHHHH--cC------ceecCCCcCCHhhhhccCCe
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG------FTEENGTLGDIYETISGSDL 181 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~--~Vivg~r~~~~s~~~A~~--~G------~~~~d~~~~~~~eav~~ADv 181 (462)
+||+|||.|+||.++|..|... |+ +|++.++...+....+.. .+ .... ..+ .+++++||+
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~------g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~---~~d-~~~~~~aDv 70 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMK------GFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY---AGD-YADLKGSDV 70 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE---ECC-GGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE---eCC-HHHhCCCCE
Confidence 5899999999999999999988 87 777766543322222221 11 1110 224 467899999
Q ss_pred EEEeecchh----------------HHHHHHHHHhcCCCCcE-EEEeccch
Q 012479 182 VLLLISDAA----------------QADNYEKIFSCMKPNSI-LGLSHGFL 215 (462)
Q Consensus 182 ViLavpd~a----------------~~~vl~eI~~~Lk~gai-L~~a~G~~ 215 (462)
||+++|... ..+++++|.++. |+.+ |..+-+..
T Consensus 71 Viiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~ 120 (319)
T 1a5z_A 71 VIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA-PDSIVIVVTNPVD 120 (319)
T ss_dssp EEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHH
T ss_pred EEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeCCcHH
Confidence 999999643 345666677764 5554 44444544
No 166
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=98.03 E-value=5.5e-06 Score=84.65 Aligned_cols=99 Identities=16% Similarity=0.099 Sum_probs=68.4
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHH-cCcee--cCCCcCCHhhhhccCCeE
Q 012479 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-AGFTE--ENGTLGDIYETISGSDLV 182 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~-~G~~~--~d~~~~~~~eav~~ADvV 182 (462)
..++| ++|+|||+|.+|.+.++.++.. |.+|++.++. ....+.+++ .|... ......+..+.++++|+|
T Consensus 164 ~~l~g-~~V~ViG~G~iG~~~a~~a~~~------Ga~V~~~d~~-~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvV 235 (377)
T 2vhw_A 164 PGVEP-ADVVVIGAGTAGYNAARIANGM------GATVTVLDIN-IDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLV 235 (377)
T ss_dssp TTBCC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESC-HHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEE
T ss_pred CCCCC-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCC-HHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEE
Confidence 35889 9999999999999999999988 8887766654 333444444 45421 000012466788999999
Q ss_pred EEeecchh--HHHH-HHHHHhcCCCCcEEEEec
Q 012479 183 LLLISDAA--QADN-YEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 183 iLavpd~a--~~~v-l~eI~~~Lk~gaiL~~a~ 212 (462)
|.+++... ...+ .++..+.|++|.+|++++
T Consensus 236 i~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 236 IGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp EECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred EECCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 99885322 1122 346677899999888775
No 167
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.01 E-value=3.3e-05 Score=67.31 Aligned_cols=75 Identities=21% Similarity=0.272 Sum_probs=54.4
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCH---hh-hhccCCeEEEeec
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI---YE-TISGSDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~---~e-av~~ADvViLavp 187 (462)
++|.|||+|.+|..+++.|++. |++|++.++. +...+.+++.|+....+...+. .+ -++++|+||+++|
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~------g~~v~vid~~-~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS------DIPLVVIETS-RTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIP 80 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEEESC-HHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred CCEEEECcCHHHHHHHHHHHHC------CCCEEEEECC-HHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence 5899999999999999999998 9988766554 5556677777875321112222 12 2578999999999
Q ss_pred chhHHH
Q 012479 188 DAAQAD 193 (462)
Q Consensus 188 d~a~~~ 193 (462)
+.....
T Consensus 81 ~~~~n~ 86 (140)
T 3fwz_A 81 NGYEAG 86 (140)
T ss_dssp CHHHHH
T ss_pred ChHHHH
Confidence 876554
No 168
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.01 E-value=8.5e-06 Score=81.55 Aligned_cols=79 Identities=11% Similarity=0.141 Sum_probs=60.0
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEE-ecCCchhHHHHHHcCceecCCCcCCHhhhh--ccCCeEEEeecc
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVG-LRKGSRSFAEARAAGFTEENGTLGDIYETI--SGSDLVLLLISD 188 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg-~r~~~~s~~~A~~~G~~~~d~~~~~~~eav--~~ADvViLavpd 188 (462)
.||||||+|.||..++.+|++. .+++++.. ++..++..+.+++.|+.. ..+.++++ .+.|+|++++|+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~-----~~~~lvav~d~~~~~~~~~~~~~g~~~----~~~~~~~l~~~~~D~V~i~tp~ 76 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKS-----EKLKLVTCYSRTEDKREKFGKRYNCAG----DATMEALLAREDVEMVIITVPN 76 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC-----SSEEEEEEECSSHHHHHHHHHHHTCCC----CSSHHHHHHCSSCCEEEECSCT
T ss_pred ceEEEEccCHHHHHHHHHHHhC-----CCcEEEEEECCCHHHHHHHHHHcCCCC----cCCHHHHhcCCCCCEEEEeCCh
Confidence 5899999999999999999865 15665533 444344445566678764 67899998 679999999999
Q ss_pred hhHHHHHHHHH
Q 012479 189 AAQADNYEKIF 199 (462)
Q Consensus 189 ~a~~~vl~eI~ 199 (462)
..+.++.....
T Consensus 77 ~~h~~~~~~al 87 (354)
T 3db2_A 77 DKHAEVIEQCA 87 (354)
T ss_dssp TSHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99988776543
No 169
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.01 E-value=1.6e-05 Score=80.16 Aligned_cols=85 Identities=12% Similarity=0.159 Sum_probs=64.6
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhc--cCCeEEEeecch
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISDA 189 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~--~ADvViLavpd~ 189 (462)
.||||||+|.||..++.+|++. .+++++...+.+....+.+.+.|+.. ..+.+++++ +.|+|++++|+.
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~a~~~g~~~----~~~~~~ll~~~~~D~V~i~tp~~ 76 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAA-----DNLEVHGVFDILAEKREAAAQKGLKI----YESYEAVLADEKVDAVLIATPND 76 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTS-----TTEEEEEEECSSHHHHHHHHTTTCCB----CSCHHHHHHCTTCCEEEECSCGG
T ss_pred CcEEEECcCHHHHHHHHHHHhC-----CCcEEEEEEcCCHHHHHHHHhcCCce----eCCHHHHhcCCCCCEEEEcCCcH
Confidence 5899999999999999999875 15566544455555556677778764 678999987 789999999999
Q ss_pred hHHHHHHHHHhcCCCCcEE
Q 012479 190 AQADNYEKIFSCMKPNSIL 208 (462)
Q Consensus 190 a~~~vl~eI~~~Lk~gaiL 208 (462)
.+.++....+ +.|+-|
T Consensus 77 ~h~~~~~~al---~aGkhV 92 (359)
T 3e18_A 77 SHKELAISAL---EAGKHV 92 (359)
T ss_dssp GHHHHHHHHH---HTTCEE
T ss_pred HHHHHHHHHH---HCCCCE
Confidence 9988876543 345543
No 170
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.99 E-value=6.9e-06 Score=85.31 Aligned_cols=98 Identities=18% Similarity=0.174 Sum_probs=71.1
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecC-------------CCc----
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN-------------GTL---- 169 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d-------------~~~---- 169 (462)
-+.+ .||+|||+|.+|...++.++.. |.+|++.+++.. ..+.+++.|..... +..
T Consensus 187 ~v~~-~kV~ViG~G~iG~~aa~~a~~l------Ga~V~v~D~~~~-~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s 258 (405)
T 4dio_A 187 TVPA-AKIFVMGAGVAGLQAIATARRL------GAVVSATDVRPA-AKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMS 258 (405)
T ss_dssp EECC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSTT-HHHHHHHTTCEECCCCC-----------------
T ss_pred CcCC-CEEEEECCcHHHHHHHHHHHHC------CCEEEEEcCCHH-HHHHHHHcCCceeecccccccccccccchhhhcc
Confidence 3566 8999999999999999999988 988877666544 45666767763100 001
Q ss_pred --------CCHhhhhccCCeEEEee--cchhHHHHH-HHHHhcCCCCcEEEEec
Q 012479 170 --------GDIYETISGSDLVLLLI--SDAAQADNY-EKIFSCMKPNSILGLSH 212 (462)
Q Consensus 170 --------~~~~eav~~ADvViLav--pd~a~~~vl-~eI~~~Lk~gaiL~~a~ 212 (462)
.++++++++||+||.++ |......++ ++....||+|++|++++
T Consensus 259 ~~~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 259 GEYQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp CHHHHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT
T ss_pred hhhhhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe
Confidence 14678899999999885 543333333 47888899999999886
No 171
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.96 E-value=2.1e-05 Score=77.41 Aligned_cols=84 Identities=15% Similarity=0.167 Sum_probs=61.0
Q ss_pred CEEEEEcccchHHH-HHHHHHHhhhhhcCCcEEE-EEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecch
Q 012479 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (462)
Q Consensus 112 kkIgIIG~G~mG~A-iA~~Lrds~~~~g~G~~Vi-vg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~ 189 (462)
.+|||||+|.||.. ++..|++. .+++++ +.++..++..+.+++.|+.. ..+.+++.++.|+|++++|+.
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~-----~~~~lvav~d~~~~~~~~~~~~~g~~~----~~~~~~l~~~~D~V~i~tp~~ 76 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAA-----SDWTLQGAWSPTRAKALPICESWRIPY----ADSLSSLAASCDAVFVHSSTA 76 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSC-----SSEEEEEEECSSCTTHHHHHHHHTCCB----CSSHHHHHTTCSEEEECSCTT
T ss_pred ceEEEECCCHHHHHHHHHHHHhC-----CCeEEEEEECCCHHHHHHHHHHcCCCc----cCcHHHhhcCCCEEEEeCCch
Confidence 68999999999996 88888763 156665 44555445455666677653 456776667899999999999
Q ss_pred hHHHHHHHHHhcCCCCcE
Q 012479 190 AQADNYEKIFSCMKPNSI 207 (462)
Q Consensus 190 a~~~vl~eI~~~Lk~gai 207 (462)
.+.++..... +.|+.
T Consensus 77 ~h~~~~~~al---~~G~~ 91 (319)
T 1tlt_A 77 SHFDVVSTLL---NAGVH 91 (319)
T ss_dssp HHHHHHHHHH---HTTCE
T ss_pred hHHHHHHHHH---HcCCe
Confidence 9988777543 35653
No 172
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.95 E-value=1.6e-05 Score=78.50 Aligned_cols=79 Identities=19% Similarity=0.142 Sum_probs=56.9
Q ss_pred CEEEEEcccchHH-HHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhh-ccCCeEEEeecch
Q 012479 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLLISDA 189 (462)
Q Consensus 112 kkIgIIG~G~mG~-AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav-~~ADvViLavpd~ 189 (462)
.||||||+|.||. .++.+|+.. .+.++++.++..++..+.+++.|+.. ...+..+++ +++|+|++++|+.
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~-----~~~~l~v~d~~~~~~~~~a~~~g~~~---~~~~~~~~l~~~~D~V~i~tp~~ 74 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQW-----PDIELVLCTRNPKVLGTLATRYRVSA---TCTDYRDVLQYGVDAVMIHAATD 74 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTS-----TTEEEEEECSCHHHHHHHHHHTTCCC---CCSSTTGGGGGCCSEEEECSCGG
T ss_pred cEEEEECCCHHHHHHHHHHHHhC-----CCceEEEEeCCHHHHHHHHHHcCCCc---cccCHHHHhhcCCCEEEEECCch
Confidence 5899999999998 599998764 15676655554444445666677641 023445555 7899999999999
Q ss_pred hHHHHHHHH
Q 012479 190 AQADNYEKI 198 (462)
Q Consensus 190 a~~~vl~eI 198 (462)
.+.++..+.
T Consensus 75 ~h~~~~~~a 83 (323)
T 1xea_A 75 VHSTLAAFF 83 (323)
T ss_dssp GHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 998887654
No 173
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.95 E-value=2.1e-05 Score=79.25 Aligned_cols=86 Identities=20% Similarity=0.279 Sum_probs=62.8
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEE-EEecCCchhHHHHHHcC--ceecCCCcCCHhhhhc--cCCeEEEee
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAG--FTEENGTLGDIYETIS--GSDLVLLLI 186 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vi-vg~r~~~~s~~~A~~~G--~~~~d~~~~~~~eav~--~ADvViLav 186 (462)
.||||||+|.||..++.+|+...+ +++++ +.++..++..+.+++.| ... ..+.+++++ +.|+|++++
T Consensus 24 ~rvgiIG~G~~g~~~~~~l~~~~~----~~~lvav~d~~~~~~~~~a~~~g~~~~~----~~~~~~ll~~~~~D~V~i~t 95 (357)
T 3ec7_A 24 LKAGIVGIGMIGSDHLRRLANTVS----GVEVVAVCDIVAGRAQAALDKYAIEAKD----YNDYHDLINDKDVEVVIITA 95 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCT----TEEEEEEECSSTTHHHHHHHHHTCCCEE----ESSHHHHHHCTTCCEEEECS
T ss_pred eeEEEECCcHHHHHHHHHHHhhCC----CcEEEEEEeCCHHHHHHHHHHhCCCCee----eCCHHHHhcCCCCCEEEEcC
Confidence 589999999999999999983211 56665 34444455556677777 333 678999887 589999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEE
Q 012479 187 SDAAQADNYEKIFSCMKPNSIL 208 (462)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~gaiL 208 (462)
|+..+.++..... +.|+-|
T Consensus 96 p~~~h~~~~~~al---~aGk~V 114 (357)
T 3ec7_A 96 SNEAHADVAVAAL---NANKYV 114 (357)
T ss_dssp CGGGHHHHHHHHH---HTTCEE
T ss_pred CcHHHHHHHHHHH---HCCCCE
Confidence 9999988877543 345533
No 174
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.94 E-value=5.4e-05 Score=68.31 Aligned_cols=93 Identities=15% Similarity=0.098 Sum_probs=59.5
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCC---Hhhh--hccCC
Q 012479 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYET--ISGSD 180 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~---~~ea--v~~AD 180 (462)
..+.+ ++|.|||+|.+|..+++.|++.- |++|++.+++ .+..+.+.+.|+....+...+ ..++ ++++|
T Consensus 35 ~~~~~-~~v~IiG~G~~G~~~a~~L~~~~-----g~~V~vid~~-~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad 107 (183)
T 3c85_A 35 INPGH-AQVLILGMGRIGTGAYDELRARY-----GKISLGIEIR-EEAAQQHRSEGRNVISGDATDPDFWERILDTGHVK 107 (183)
T ss_dssp BCCTT-CSEEEECCSHHHHHHHHHHHHHH-----CSCEEEEESC-HHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCC
T ss_pred cCCCC-CcEEEECCCHHHHHHHHHHHhcc-----CCeEEEEECC-HHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCC
Confidence 44667 89999999999999999998630 5677766554 444566667776421111122 2344 67899
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCC
Q 012479 181 LVLLLISDAAQADNYEKIFSCMKPN 205 (462)
Q Consensus 181 vViLavpd~a~~~vl~eI~~~Lk~g 205 (462)
+||+++|+......+-.....+.++
T Consensus 108 ~vi~~~~~~~~~~~~~~~~~~~~~~ 132 (183)
T 3c85_A 108 LVLLAMPHHQGNQTALEQLQRRNYK 132 (183)
T ss_dssp EEEECCSSHHHHHHHHHHHHHTTCC
T ss_pred EEEEeCCChHHHHHHHHHHHHHCCC
Confidence 9999999765543333333334433
No 175
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.94 E-value=3e-05 Score=65.96 Aligned_cols=98 Identities=12% Similarity=0.070 Sum_probs=59.2
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHh---hh-hccCCeEE
Q 012479 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY---ET-ISGSDLVL 183 (462)
Q Consensus 108 l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~---ea-v~~ADvVi 183 (462)
+++ ++|.|+|+|.+|..+++.|++. |.+|++..+. ....+.+.+.|.....+...+.+ ++ ++++|+|+
T Consensus 4 ~~~-~~v~I~G~G~iG~~~a~~l~~~------g~~v~~~d~~-~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi 75 (144)
T 2hmt_A 4 IKN-KQFAVIGLGRFGGSIVKELHRM------GHEVLAVDIN-EEKVNAYASYATHAVIANATEENELLSLGIRNFEYVI 75 (144)
T ss_dssp --C-CSEEEECCSHHHHHHHHHHHHT------TCCCEEEESC-HHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEE
T ss_pred CcC-CcEEEECCCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEE
Confidence 456 8899999999999999999998 8887766654 33333344445421111122222 23 67899999
Q ss_pred Eeecch-hHHHHHHHHHhcCCCCcEEEEecc
Q 012479 184 LLISDA-AQADNYEKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 184 Lavpd~-a~~~vl~eI~~~Lk~gaiL~~a~G 213 (462)
+++++. .....+......+.+..++..+.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~ 106 (144)
T 2hmt_A 76 VAIGANIQASTLTTLLLKELDIPNIWVKAQN 106 (144)
T ss_dssp ECCCSCHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred ECCCCchHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 999975 332233333344455555555544
No 176
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=97.94 E-value=3.5e-05 Score=76.47 Aligned_cols=93 Identities=20% Similarity=0.152 Sum_probs=60.7
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHH-------c--CceecCCCcCCHhhhhccCCe
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA-------A--GFTEENGTLGDIYETISGSDL 181 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~-------~--G~~~~d~~~~~~~eav~~ADv 181 (462)
+||+|||.|+||.++|..|... |+ +|++.++..++....+.+ . ..... ...+. +++++||+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~------g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~--~t~d~-~a~~~aDi 75 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD------NLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVI--GTDDY-ADISGSDV 75 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEE--EESCG-GGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEE--ECCCH-HHhCCCCE
Confidence 7999999999999999999998 88 877666654322221111 0 11110 02455 78999999
Q ss_pred EEEee--------------cc--hhHHHHHHHHHhcCCCCcEEE-Eeccc
Q 012479 182 VLLLI--------------SD--AAQADNYEKIFSCMKPNSILG-LSHGF 214 (462)
Q Consensus 182 ViLav--------------pd--~a~~~vl~eI~~~Lk~gaiL~-~a~G~ 214 (462)
||+++ +. ....+++++|.++. |+++|. .+...
T Consensus 76 Vi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~-~~~iii~~sNp~ 124 (317)
T 2ewd_A 76 VIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYC-PNAFVICITNPL 124 (317)
T ss_dssp EEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSH
T ss_pred EEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHC-CCcEEEEeCChH
Confidence 99999 32 22356777888875 566554 44443
No 177
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=97.93 E-value=2.2e-05 Score=77.19 Aligned_cols=98 Identities=18% Similarity=0.160 Sum_probs=62.0
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc--EEEEEecCCchhHHHHH--HcCceec-CC--CcCCHhhhhccCCeEEE
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEAR--AAGFTEE-NG--TLGDIYETISGSDLVLL 184 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~--~Vivg~r~~~~s~~~A~--~~G~~~~-d~--~~~~~~eav~~ADvViL 184 (462)
+||+|||.|++|.++|..|... |+ +|++.++...+....+. ..+.... +. ...+..+++++||+||+
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~------g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii 81 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQR------GIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVI 81 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEE
Confidence 7999999999999999999988 87 88766654322221122 2333100 00 01112467889999999
Q ss_pred eecchhH----------------HHHHHHHHhcCCCCcEE-EEeccchH
Q 012479 185 LISDAAQ----------------ADNYEKIFSCMKPNSIL-GLSHGFLL 216 (462)
Q Consensus 185 avpd~a~----------------~~vl~eI~~~Lk~gaiL-~~a~G~~i 216 (462)
+++.... .+++++|.++ .++++| ..+-|+.+
T Consensus 82 ~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~Np~~~ 129 (319)
T 1lld_A 82 TAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITNPVDI 129 (319)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecCchHH
Confidence 9953322 2566777775 566654 56667754
No 178
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.93 E-value=9e-06 Score=81.44 Aligned_cols=92 Identities=13% Similarity=0.033 Sum_probs=65.1
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcC---ceecCCCcCCHhhhhccCCeEEEeecc
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG---FTEENGTLGDIYETISGSDLVLLLISD 188 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G---~~~~d~~~~~~~eav~~ADvViLavpd 188 (462)
++|+|||+|.||.+++.+|+... ...+|.+++|..++..+.+++.+ +.. . +.+.++++ ++|+|+++||.
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~----~~~~V~v~~r~~~~a~~la~~~~~~~~~~--~-~~~~~e~v-~aDvVi~aTp~ 197 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVF----DIGEVKAYDVREKAAKKFVSYCEDRGISA--S-VQPAEEAS-RCDVLVTTTPS 197 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHS----CCCEEEEECSSHHHHHHHHHHHHHTTCCE--E-ECCHHHHT-SSSEEEECCCC
T ss_pred CEEEEEcCcHHHHHHHHHHHHhC----CccEEEEECCCHHHHHHHHHHHHhcCceE--E-ECCHHHHh-CCCEEEEeeCC
Confidence 89999999999999999998740 02367777776555555555432 211 1 46788999 99999999997
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEeccch
Q 012479 189 AAQADNYEKIFSCMKPNSILGLSHGFL 215 (462)
Q Consensus 189 ~a~~~vl~eI~~~Lk~gaiL~~a~G~~ 215 (462)
.. .++. ...+++|++|.+.+.+.
T Consensus 198 ~~--pv~~--~~~l~~G~~V~~ig~~~ 220 (322)
T 1omo_A 198 RK--PVVK--AEWVEEGTHINAIGADG 220 (322)
T ss_dssp SS--CCBC--GGGCCTTCEEEECSCCS
T ss_pred CC--ceec--HHHcCCCeEEEECCCCC
Confidence 43 2221 25688999888776654
No 179
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.93 E-value=2.1e-05 Score=78.00 Aligned_cols=86 Identities=13% Similarity=0.127 Sum_probs=61.6
Q ss_pred CEEEEEcccchHHHHHHHHH-HhhhhhcCCcEEEEEecCCc-hhHHHHHHcCc-eecCCCcCCHhhhhc--cCCeEEEee
Q 012479 112 NQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVKVGLRKGS-RSFAEARAAGF-TEENGTLGDIYETIS--GSDLVLLLI 186 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr-ds~~~~g~G~~Vivg~r~~~-~s~~~A~~~G~-~~~d~~~~~~~eav~--~ADvViLav 186 (462)
.+|+|||+|.||..++..|+ .. .+++++...+.+. +..+.+++.|. .. ..+.+++++ ++|+|++++
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~-----~~~~~vav~d~~~~~~~~~a~~~g~~~~----~~~~~~~l~~~~~D~V~i~t 79 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKI-----QGVKLVAACALDSNQLEWAKNELGVETT----YTNYKDMIDTENIDAIFIVA 79 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTC-----SSEEEEEEECSCHHHHHHHHHTTCCSEE----ESCHHHHHTTSCCSEEEECS
T ss_pred ceEEEEcCCHHHHHHHHHHHhcC-----CCcEEEEEecCCHHHHHHHHHHhCCCcc----cCCHHHHhcCCCCCEEEEeC
Confidence 68999999999999999998 43 1566554444433 33345566676 32 568888886 699999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEE
Q 012479 187 SDAAQADNYEKIFSCMKPNSILG 209 (462)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~gaiL~ 209 (462)
|+..+.++..+.. +.|+.|.
T Consensus 80 p~~~h~~~~~~al---~~G~~v~ 99 (346)
T 3cea_A 80 PTPFHPEMTIYAM---NAGLNVF 99 (346)
T ss_dssp CGGGHHHHHHHHH---HTTCEEE
T ss_pred ChHhHHHHHHHHH---HCCCEEE
Confidence 9999988776543 4566443
No 180
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.91 E-value=1.6e-05 Score=78.78 Aligned_cols=86 Identities=12% Similarity=0.108 Sum_probs=60.6
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEE-EEecCCchhHHHHHHcCceecCCCcCCHhhhhc--cCCeEEEeecc
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vi-vg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~--~ADvViLavpd 188 (462)
.||||||+|.||..++.+|+.. .+.+++ +.++..++..+.+.+.|+.. ...+.++++. +.|+|++++|+
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~-----~~~~~~av~d~~~~~~~~~a~~~~~~~---~~~~~~~ll~~~~~D~V~i~tp~ 77 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLA-----GNGEVVAVSSRTLESAQAFANKYHLPK---AYDKLEDMLADESIDVIYVATIN 77 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHH-----CSEEEEEEECSCSSTTCC---CCCCSC---EESCHHHHHTCTTCCEEEECSCG
T ss_pred eEEEEEechHHHHHHHHHHHhC-----CCcEEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEECCCc
Confidence 6899999999999999999876 034544 34444445455666667631 1578999987 79999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEE
Q 012479 189 AAQADNYEKIFSCMKPNSIL 208 (462)
Q Consensus 189 ~a~~~vl~eI~~~Lk~gaiL 208 (462)
..+.++..... +.|+-|
T Consensus 78 ~~h~~~~~~al---~aGk~V 94 (329)
T 3evn_A 78 QDHYKVAKAAL---LAGKHV 94 (329)
T ss_dssp GGHHHHHHHHH---HTTCEE
T ss_pred HHHHHHHHHHH---HCCCeE
Confidence 99988776543 345533
No 181
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.91 E-value=2e-05 Score=79.13 Aligned_cols=79 Identities=15% Similarity=0.139 Sum_probs=61.0
Q ss_pred CEEEEEcccchHH-HHHHHHHHhhhhhcCCcEEE-EEecCCchhHHHHHHcCceecCCCcCCHhhhhc--cCCeEEEeec
Q 012479 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~G~mG~-AiA~~Lrds~~~~g~G~~Vi-vg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~--~ADvViLavp 187 (462)
.||||||+|.||. .++.+|++. .+++++ +.++..++..+.+++.|+.. ..+.+|+++ +.|+|++++|
T Consensus 28 ~rigiIG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~g~~~----~~~~~~ll~~~~~D~V~i~tp 98 (350)
T 3rc1_A 28 IRVGVIGCADIAWRRALPALEAE-----PLTEVTAIASRRWDRAKRFTERFGGEP----VEGYPALLERDDVDAVYVPLP 98 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHC-----TTEEEEEEEESSHHHHHHHHHHHCSEE----EESHHHHHTCTTCSEEEECCC
T ss_pred eEEEEEcCcHHHHHHHHHHHHhC-----CCeEEEEEEcCCHHHHHHHHHHcCCCC----cCCHHHHhcCCCCCEEEECCC
Confidence 6899999999998 799999875 145655 44444445556667778875 578999886 5899999999
Q ss_pred chhHHHHHHHHH
Q 012479 188 DAAQADNYEKIF 199 (462)
Q Consensus 188 d~a~~~vl~eI~ 199 (462)
+..+.++.....
T Consensus 99 ~~~h~~~~~~al 110 (350)
T 3rc1_A 99 AVLHAEWIDRAL 110 (350)
T ss_dssp GGGHHHHHHHHH
T ss_pred cHHHHHHHHHHH
Confidence 999998877644
No 182
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.90 E-value=2e-05 Score=78.33 Aligned_cols=86 Identities=17% Similarity=0.225 Sum_probs=60.6
Q ss_pred ccCCCCEEEEEcccchHHHH-HHHHHHhhhhhcCCcEEEE-EecCCchhHHHHHHcCceecCCCcCCHhhhhc--cCCeE
Q 012479 107 AFNGINQIGVIGWGSQGPAQ-AQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLV 182 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~Ai-A~~Lrds~~~~g~G~~Viv-g~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~--~ADvV 182 (462)
+++.|.||||||+|.||... +..+++. + +.+++. .++..++..+.|++.|+.. ...|.+|+++ +.|+|
T Consensus 19 ~~~~mirigiIG~G~ig~~~~~~~~~~~-~----~~~lvav~d~~~~~a~~~a~~~g~~~---~y~d~~ell~~~~iDaV 90 (350)
T 4had_A 19 YFQSMLRFGIISTAKIGRDNVVPAIQDA-E----NCVVTAIASRDLTRAREMADRFSVPH---AFGSYEEMLASDVIDAV 90 (350)
T ss_dssp ---CCEEEEEESCCHHHHHTHHHHHHHC-S----SEEEEEEECSSHHHHHHHHHHHTCSE---EESSHHHHHHCSSCSEE
T ss_pred cccCccEEEEEcChHHHHHHHHHHHHhC-C----CeEEEEEECCCHHHHHHHHHHcCCCe---eeCCHHHHhcCCCCCEE
Confidence 45566799999999999865 5666654 1 456553 4444455667778888742 1578999885 57999
Q ss_pred EEeecchhHHHHHHHHHh
Q 012479 183 LLLISDAAQADNYEKIFS 200 (462)
Q Consensus 183 iLavpd~a~~~vl~eI~~ 200 (462)
+++||+..+.++..+.+.
T Consensus 91 ~I~tP~~~H~~~~~~al~ 108 (350)
T 4had_A 91 YIPLPTSQHIEWSIKAAD 108 (350)
T ss_dssp EECSCGGGHHHHHHHHHH
T ss_pred EEeCCCchhHHHHHHHHh
Confidence 999999999988776543
No 183
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=97.89 E-value=3.1e-05 Score=82.25 Aligned_cols=113 Identities=12% Similarity=0.158 Sum_probs=88.4
Q ss_pred HhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHhcCCcchhhhchhhccCchh-HHHH-HHH
Q 012479 310 LGAVHGIVESLFRRFTENGMNEDLAYKNTVECITGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSASYYP-CMEI-LYE 387 (462)
Q Consensus 310 ~G~~paliea~~d~~v~~G~~~e~A~~~~~e~i~Gli~~li~e~G~~~m~~~vs~~~~aeyg~~~~~~~~~-~~~~-m~e 387 (462)
+|.-.+++.|.+|.+.+.|++|.+++++++++.+.++..++.+.|+++|+|+||+|++ -|..- +.| .+.+ .++
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~ 468 (525)
T 3fr7_A 394 AGVYVALMMAQIEVLRKKGHSYSEIINESVIESVDSLNPFMHARGVAFMVDNCSTTAR--LGSRK---WAPRFDYILTQQ 468 (525)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHHHHHHHHTHHHHHTHHHHHHHHCHHHHHHHSCHHHH--HHHHH---HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHhhhHHHHHHHhhhhhhhhhhhHHHHhhccHhhh--ccccc---chHhHHHHHHHH
Confidence 4666789999999999999999999999999999999999999999999999997544 45431 222 1112 255
Q ss_pred HHHhccCChhhhHHHHhcccccccCCCCcccchhhhcChhHHHhHHHHhcCCCCCC
Q 012479 388 CYEDVAAGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRSTRPAGDL 443 (462)
Q Consensus 388 ~~~~i~~G~far~~~~~~~~~~~~~g~~~~~~~~i~~~~ie~vG~~lR~~~~~~~~ 443 (462)
+|..|.+|..+++-+. .+..+|++-++=+.--++||.-++
T Consensus 469 ~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~ 508 (525)
T 3fr7_A 469 AFVTVDKDAPINQDLI----------------SNFMSDPVHGAIEVCAELRPTVDI 508 (525)
T ss_dssp HHHHHHTTCCCCHHHH----------------HHHHHCTHHHHHHHHHTTSCSSCC
T ss_pred hHHHhhcCCcchHHHH----------------HHHhhChHHHHHHHHHhcCCCceE
Confidence 8888888887654222 234578888888888899999987
No 184
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.88 E-value=5.3e-05 Score=70.55 Aligned_cols=95 Identities=13% Similarity=0.063 Sum_probs=63.0
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCC---Hhhh-hccCCeEEEeec
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYET-ISGSDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~---~~ea-v~~ADvViLavp 187 (462)
|||.|||+|.+|..+++.|.+. |++|++.++..++..+.+...|+....+...+ ..++ +++||+||++++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~------g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR------KYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT------TCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence 5899999999999999999998 99887776654433333444565321111222 2233 788999999999
Q ss_pred chhHHHHHHHHHhcC-CCCcEEEEec
Q 012479 188 DAAQADNYEKIFSCM-KPNSILGLSH 212 (462)
Q Consensus 188 d~a~~~vl~eI~~~L-k~gaiL~~a~ 212 (462)
+.....++..++..+ ....+++-+.
T Consensus 75 ~d~~n~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 75 RDEVNLFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp CHHHHHHHHHHHHHTSCCCEEEECCC
T ss_pred CcHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 987766666555543 3334555443
No 185
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.88 E-value=3.4e-05 Score=63.54 Aligned_cols=92 Identities=16% Similarity=0.048 Sum_probs=62.0
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCC-cEEEEEecCCchhHHHHHHcCceecCCCcC---CHhhhhccCCeEEEeec
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEENGTLG---DIYETISGSDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G-~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~---~~~eav~~ADvViLavp 187 (462)
++|.|+|.|.+|.++++.|.+. | .+|++..|.. ...+.....|+........ +..++++++|+||.++|
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~------g~~~v~~~~r~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~ 78 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTS------SNYSVTVADHDL-AALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAP 78 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC------SSEEEEEEESCH-HHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCceEEEEeCCH-HHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCC
Confidence 8999999999999999999998 8 7877766653 3344444455432111122 24467789999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEecc
Q 012479 188 DAAQADNYEKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 188 d~a~~~vl~eI~~~Lk~gaiL~~a~G 213 (462)
......+.+.... .|....+..+
T Consensus 79 ~~~~~~~~~~~~~---~g~~~~~~~~ 101 (118)
T 3ic5_A 79 FFLTPIIAKAAKA---AGAHYFDLTE 101 (118)
T ss_dssp GGGHHHHHHHHHH---TTCEEECCCS
T ss_pred chhhHHHHHHHHH---hCCCEEEecC
Confidence 8877666665433 4554444443
No 186
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.85 E-value=5.4e-05 Score=75.93 Aligned_cols=90 Identities=13% Similarity=0.136 Sum_probs=62.5
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEE-EecCCchhHHHHHHcCceecCCCcCCHhhhhc--cCCeEEEeecc
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Viv-g~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~--~ADvViLavpd 188 (462)
.+|||||+|.||..++..|+.. .+++++. .++..++..+.+.+.|+........+.+++++ +.|+|++++|+
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~-----~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 81 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLA-----PNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPT 81 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHC-----TTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCG
T ss_pred eEEEEECchHHHHHHHHHHhhC-----CCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCCh
Confidence 6899999999999999999875 0455543 34443444556677774100011568888886 59999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEE
Q 012479 189 AAQADNYEKIFSCMKPNSILG 209 (462)
Q Consensus 189 ~a~~~vl~eI~~~Lk~gaiL~ 209 (462)
..+.++..+. |+.|+.|.
T Consensus 82 ~~h~~~~~~a---l~aGk~V~ 99 (362)
T 1ydw_A 82 SLHVEWAIKA---AEKGKHIL 99 (362)
T ss_dssp GGHHHHHHHH---HTTTCEEE
T ss_pred HHHHHHHHHH---HHCCCeEE
Confidence 9998877654 45666443
No 187
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.83 E-value=1.5e-05 Score=78.42 Aligned_cols=83 Identities=12% Similarity=0.106 Sum_probs=56.9
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhc--cCCeEEEeecch
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISDA 189 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~--~ADvViLavpd~ 189 (462)
.+|||||+|.||..++.+|++. .+++++...+.+....+.+.+. +.. ..+.+++++ ++|+|++++|+.
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~-----~~~~~v~v~d~~~~~~~~~~~~-~~~----~~~~~~~l~~~~~D~V~i~tp~~ 80 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGL-----PGAALVRLASSNPDNLALVPPG-CVI----ESDWRSVVSAPEVEAVIIATPPA 80 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHC-----TTEEEEEEEESCHHHHTTCCTT-CEE----ESSTHHHHTCTTCCEEEEESCGG
T ss_pred ceEEEECCcHHHHHHHHHHHhC-----CCcEEEEEEeCCHHHHHHHHhh-Ccc----cCCHHHHhhCCCCCEEEEeCChH
Confidence 6899999999999999999875 0456553444333322221111 322 467888885 799999999999
Q ss_pred hHHHHHHHHHhcCCCCcE
Q 012479 190 AQADNYEKIFSCMKPNSI 207 (462)
Q Consensus 190 a~~~vl~eI~~~Lk~gai 207 (462)
.+.++..+. ++.|+.
T Consensus 81 ~h~~~~~~a---l~~Gk~ 95 (315)
T 3c1a_A 81 THAEITLAA---IASGKA 95 (315)
T ss_dssp GHHHHHHHH---HHTTCE
T ss_pred HHHHHHHHH---HHCCCc
Confidence 998887754 344653
No 188
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=97.82 E-value=2.2e-05 Score=81.01 Aligned_cols=98 Identities=13% Similarity=0.088 Sum_probs=68.6
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCc-----------------
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL----------------- 169 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~----------------- 169 (462)
.+.| ++|+|||+|.+|...++.++.. |.+|++.+++. ...+.+++.|.....-..
T Consensus 169 ~l~g-~~V~ViGaG~iG~~aa~~a~~~------Ga~V~v~D~~~-~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~ 240 (401)
T 1x13_A 169 KVPP-AKVMVIGAGVAGLAAIGAANSL------GAIVRAFDTRP-EVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDA 240 (401)
T ss_dssp EECC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCG-GGHHHHHHTTCEECCC--------CCHHHHHHSHH
T ss_pred CcCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCH-HHHHHHHHcCCEEEEecccccccccccchhhccHH
Confidence 4788 9999999999999999999988 88877766554 445566777765210000
Q ss_pred ------CCHhhhhccCCeEEEe--ecchhHHHHH-HHHHhcCCCCcEEEEec
Q 012479 170 ------GDIYETISGSDLVLLL--ISDAAQADNY-EKIFSCMKPNSILGLSH 212 (462)
Q Consensus 170 ------~~~~eav~~ADvViLa--vpd~a~~~vl-~eI~~~Lk~gaiL~~a~ 212 (462)
.+..++++++|+||.+ +|......++ ++....|++|.+|++.+
T Consensus 241 ~~~~~~~~l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva 292 (401)
T 1x13_A 241 FIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLA 292 (401)
T ss_dssp HHHHHHHHHHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHHHHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEc
Confidence 0256788899999999 5422222333 45566799999988776
No 189
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.81 E-value=1.3e-05 Score=79.36 Aligned_cols=76 Identities=16% Similarity=0.160 Sum_probs=58.5
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHHcCc---eecCCCcCCHhhhhccCCeE
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGF---TEENGTLGDIYETISGSDLV 182 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~---~~~d~~~~~~~eav~~ADvV 182 (462)
.++| ++|.|||.|.||.+++..|.+. |. +|++.+|..++..+.+++.+. ... ...+..++++++|+|
T Consensus 138 ~l~~-~~vlVlGaGg~g~aia~~L~~~------G~~~V~v~nR~~~ka~~la~~~~~~~~~~~--~~~~~~~~~~~aDiv 208 (297)
T 2egg_A 138 TLDG-KRILVIGAGGGARGIYFSLLST------AAERIDMANRTVEKAERLVREGDERRSAYF--SLAEAETRLAEYDII 208 (297)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHTT------TCSEEEEECSSHHHHHHHHHHSCSSSCCEE--CHHHHHHTGGGCSEE
T ss_pred CCCC-CEEEEECcHHHHHHHHHHHHHC------CCCEEEEEeCCHHHHHHHHHHhhhccCcee--eHHHHHhhhccCCEE
Confidence 4678 9999999999999999999998 87 888888876665666666543 110 012456778899999
Q ss_pred EEeecchhH
Q 012479 183 LLLISDAAQ 191 (462)
Q Consensus 183 iLavpd~a~ 191 (462)
|.++|....
T Consensus 209 In~t~~~~~ 217 (297)
T 2egg_A 209 INTTSVGMH 217 (297)
T ss_dssp EECSCTTCS
T ss_pred EECCCCCCC
Confidence 999997653
No 190
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.80 E-value=3.6e-05 Score=76.36 Aligned_cols=88 Identities=13% Similarity=0.101 Sum_probs=62.4
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEE-EecCCchhHHHHHHcCceecCCCcCCHhhhhc--cCCeEEEeecc
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Viv-g~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~--~ADvViLavpd 188 (462)
.||||||+|.||..++.+|+.. . +.+++++. .++..++..+.+++.|+.. ...+.+++++ +.|+|++++|+
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~-~--~~~~~l~av~d~~~~~a~~~a~~~~~~~---~~~~~~~ll~~~~vD~V~i~tp~ 76 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTL-P--RSEHQVVAVAARDLSRAKEFAQKHDIPK---AYGSYEELAKDPNVEVAYVGTQH 76 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTS-C--TTTEEEEEEECSSHHHHHHHHHHHTCSC---EESSHHHHHHCTTCCEEEECCCG
T ss_pred cEEEEECchHHHHHHHHHHHhC-C--CCCeEEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEECCCc
Confidence 5899999999999999999865 0 00244443 3444345556677778731 1578999987 69999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEE
Q 012479 189 AAQADNYEKIFSCMKPNSIL 208 (462)
Q Consensus 189 ~a~~~vl~eI~~~Lk~gaiL 208 (462)
..+.++..+.. +.|+-|
T Consensus 77 ~~H~~~~~~al---~~GkhV 93 (334)
T 3ohs_X 77 PQHKAAVMLCL---AAGKAV 93 (334)
T ss_dssp GGHHHHHHHHH---HTTCEE
T ss_pred HHHHHHHHHHH---hcCCEE
Confidence 99988776543 345543
No 191
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.79 E-value=3e-06 Score=82.43 Aligned_cols=90 Identities=16% Similarity=0.063 Sum_probs=61.9
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEee
Q 012479 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (462)
Q Consensus 108 l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLav 186 (462)
++| +|+|||.|.||.+++..|.+. |. +|++.+|+.++..+.+++.+... ..+..++++++|+||.+|
T Consensus 107 ~~~--~vliiGaGg~a~ai~~~L~~~------G~~~I~v~nR~~~ka~~la~~~~~~~----~~~~~~~~~~aDiVInat 174 (253)
T 3u62_A 107 VKE--PVVVVGAGGAARAVIYALLQM------GVKDIWVVNRTIERAKALDFPVKIFS----LDQLDEVVKKAKSLFNTT 174 (253)
T ss_dssp CCS--SEEEECCSHHHHHHHHHHHHT------TCCCEEEEESCHHHHHTCCSSCEEEE----GGGHHHHHHTCSEEEECS
T ss_pred CCC--eEEEECcHHHHHHHHHHHHHc------CCCEEEEEeCCHHHHHHHHHHcccCC----HHHHHhhhcCCCEEEECC
Confidence 455 899999999999999999998 88 78888886444333333333222 456778899999999999
Q ss_pred cchhHHH--HHHHHHhcCCCCcEEEEe
Q 012479 187 SDAAQAD--NYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 187 pd~a~~~--vl~eI~~~Lk~gaiL~~a 211 (462)
|.....+ .+. ...++++.+|.+.
T Consensus 175 p~gm~p~~~~i~--~~~l~~~~~V~Di 199 (253)
T 3u62_A 175 SVGMKGEELPVS--DDSLKNLSLVYDV 199 (253)
T ss_dssp STTTTSCCCSCC--HHHHTTCSEEEEC
T ss_pred CCCCCCCCCCCC--HHHhCcCCEEEEe
Confidence 8643221 111 1235678877654
No 192
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.78 E-value=8.3e-05 Score=72.09 Aligned_cols=145 Identities=13% Similarity=0.080 Sum_probs=86.6
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecchh
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~a 190 (462)
|+||+|+|+|.||..+++.+.+. +.+++...+.+.. ...|+.. ..++++++ ++|+||-.+.|..
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~------~~eLva~~d~~~~-----~~~gv~v----~~dl~~l~-~~DVvIDft~p~a 66 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEK------GHEIVGVIENTPK-----ATTPYQQ----YQHIADVK-GADVAIDFSNPNL 66 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEECSSCC-------CCSCB----CSCTTTCT-TCSEEEECSCHHH
T ss_pred ceEEEEECcCHHHHHHHHHHHhC------CCEEEEEEecCcc-----ccCCCce----eCCHHHHh-CCCEEEEeCChHH
Confidence 48999999999999999999887 5554443554332 1367764 56778888 9999997777766
Q ss_pred HHHHHHHHHhcCCCCc-EEEEeccchHHHhhhccccCCCCccEEecccCCCchh---------hHHhhhcCccccCCCce
Q 012479 191 QADNYEKIFSCMKPNS-ILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS---------VRRLYVQGKEINGAGIN 260 (462)
Q Consensus 191 ~~~vl~eI~~~Lk~ga-iL~~a~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~---------vr~lf~~G~~~~G~Gv~ 260 (462)
..+.++ ++.|. +|+-+.|++-..++. .....+.+.+ ..+||..--+ ..+.|.+ .-+-
T Consensus 67 ~~~~~~-----l~~g~~vVigTTG~s~e~~~~-l~~aa~~~~v-~~a~N~S~Gv~l~~~~~~~aa~~l~~------~die 133 (243)
T 3qy9_A 67 LFPLLD-----EDFHLPLVVATTGEKEKLLNK-LDELSQNMPV-FFSANMSYGVHALTKILAAAVPLLDD------FDIE 133 (243)
T ss_dssp HHHHHT-----SCCCCCEEECCCSSHHHHHHH-HHHHTTTSEE-EECSSCCHHHHHHHHHHHHHHHHTTT------SEEE
T ss_pred HHHHHH-----HhcCCceEeCCCCCCHHHHHH-HHHHHhcCCE-EEECCccHHHHHHHHHHHHHHHhcCC------CCEE
Confidence 655543 66666 455566886432221 1122344555 6788865333 0111110 0111
Q ss_pred EEEeecc----C-CCHHHHHHHHHHHHHhCC
Q 012479 261 SSFAVHQ----D-VDGRATNVALGWSVALGS 286 (462)
Q Consensus 261 aliav~q----d-~tgea~e~a~al~~aiG~ 286 (462)
++-.|. | +||.++.+++.+ +..|.
T Consensus 134 -I~E~HH~~K~DaPSGTA~~la~~i-~~~~~ 162 (243)
T 3qy9_A 134 -LTEAHHNKKVDAPSGTLEKLYDVI-VSLKE 162 (243)
T ss_dssp -EEEEECTTCCSSSCHHHHHHHHHH-HHHST
T ss_pred -EEEcCCCCCCCCCCHHHHHHHHHH-HhcCc
Confidence 233333 2 677888888777 77764
No 193
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=97.78 E-value=6.1e-05 Score=74.67 Aligned_cols=93 Identities=20% Similarity=0.212 Sum_probs=57.8
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc--EEEEEecCCchhHHHHHHc--Cc------eecCCCcCCHhhhhccCCe
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAA--GF------TEENGTLGDIYETISGSDL 181 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~--~Vivg~r~~~~s~~~A~~~--G~------~~~d~~~~~~~eav~~ADv 181 (462)
+||+|||.|++|.++|..|... |+ +|++.++...+....+.+. +. .. ...+ .+++++||+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~------g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i---~~~~-~~a~~~aDv 70 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLR------GSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRV---WHGG-HSELADAQV 70 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEE---EEEC-GGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEE---EECC-HHHhCCCCE
Confidence 5899999999999999999988 87 7766655433222223321 11 11 0123 468999999
Q ss_pred EEEeecchhH----------------HHHHHHHHhcCCCCcEEEE-eccch
Q 012479 182 VLLLISDAAQ----------------ADNYEKIFSCMKPNSILGL-SHGFL 215 (462)
Q Consensus 182 ViLavpd~a~----------------~~vl~eI~~~Lk~gaiL~~-a~G~~ 215 (462)
||++++.... .+++++|.++ .|+.+|.. +-...
T Consensus 71 VIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~tNP~~ 120 (304)
T 2v6b_A 71 VILTAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLVTSNPVD 120 (304)
T ss_dssp EEECC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEECSSSHH
T ss_pred EEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEecCchH
Confidence 9999954322 4555667776 57776543 43443
No 194
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=97.76 E-value=5.7e-05 Score=77.73 Aligned_cols=75 Identities=23% Similarity=0.322 Sum_probs=58.8
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEe
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLa 185 (462)
.++| ++|+|||+|.||.++++.|+.. |. +|++.+|...+..+.+.+.|.... ...+..+++.++|+||.+
T Consensus 164 ~l~g-~~VlIiGaG~iG~~~a~~l~~~------G~~~V~v~~r~~~ra~~la~~~g~~~~--~~~~l~~~l~~aDvVi~a 234 (404)
T 1gpj_A 164 SLHD-KTVLVVGAGEMGKTVAKSLVDR------GVRAVLVANRTYERAVELARDLGGEAV--RFDELVDHLARSDVVVSA 234 (404)
T ss_dssp CCTT-CEEEEESCCHHHHHHHHHHHHH------CCSEEEEECSSHHHHHHHHHHHTCEEC--CGGGHHHHHHTCSEEEEC
T ss_pred cccC-CEEEEEChHHHHHHHHHHHHHC------CCCEEEEEeCCHHHHHHHHHHcCCcee--cHHhHHHHhcCCCEEEEc
Confidence 3688 9999999999999999999998 98 888877765554467777776421 124567788999999999
Q ss_pred ecchh
Q 012479 186 ISDAA 190 (462)
Q Consensus 186 vpd~a 190 (462)
+|...
T Consensus 235 t~~~~ 239 (404)
T 1gpj_A 235 TAAPH 239 (404)
T ss_dssp CSSSS
T ss_pred cCCCC
Confidence 98544
No 195
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.74 E-value=5.1e-05 Score=77.52 Aligned_cols=98 Identities=13% Similarity=0.115 Sum_probs=68.5
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceec--CCC-------------cCC
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE--NGT-------------LGD 171 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~--d~~-------------~~~ 171 (462)
.+.| ++|+|||+|.+|.+.++.++.. |.+|++.+++.. ..+.+++.|.... +.. ..+
T Consensus 169 ~l~g-~~V~ViGaG~iG~~aa~~a~~~------Ga~V~~~d~~~~-~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s 240 (384)
T 1l7d_A 169 TVPP-ARVLVFGVGVAGLQAIATAKRL------GAVVMATDVRAA-TKEQVESLGGKFITVDDEAMKTAETAGGYAKEMG 240 (384)
T ss_dssp EECC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCST-THHHHHHTTCEECCC-------------------
T ss_pred CCCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCHH-HHHHHHHcCCeEEeecccccccccccccchhhcC
Confidence 5688 9999999999999999999988 888776665543 4566666776421 000 000
Q ss_pred ----------HhhhhccCCeEEEee--cchhHHHHH-HHHHhcCCCCcEEEEec
Q 012479 172 ----------IYETISGSDLVLLLI--SDAAQADNY-EKIFSCMKPNSILGLSH 212 (462)
Q Consensus 172 ----------~~eav~~ADvViLav--pd~a~~~vl-~eI~~~Lk~gaiL~~a~ 212 (462)
..+.++++|+||.++ |......++ ++....|++|.+|++.+
T Consensus 241 ~~~~~~~~~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva 294 (384)
T 1l7d_A 241 EEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA 294 (384)
T ss_dssp ----CCHHHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT
T ss_pred HHHHhhhHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEe
Confidence 567788999999998 422122233 45667799999988776
No 196
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.71 E-value=5.8e-06 Score=81.61 Aligned_cols=94 Identities=13% Similarity=0.111 Sum_probs=61.1
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEe
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLa 185 (462)
.++| +++.|||.|-+|.+++..|.+. |. +|++.+|+.++..+.+. .+.. ....+..++++++|+||.+
T Consensus 114 ~l~~-k~vlvlGaGg~g~aia~~L~~~------G~~~v~v~~R~~~~a~~la~--~~~~--~~~~~~~~~~~~aDiVIna 182 (277)
T 3don_A 114 GIED-AYILILGAGGASKGIANELYKI------VRPTLTVANRTMSRFNNWSL--NINK--INLSHAESHLDEFDIIINT 182 (277)
T ss_dssp TGGG-CCEEEECCSHHHHHHHHHHHTT------CCSCCEEECSCGGGGTTCCS--CCEE--ECHHHHHHTGGGCSEEEEC
T ss_pred CcCC-CEEEEECCcHHHHHHHHHHHHC------CCCEEEEEeCCHHHHHHHHH--hccc--ccHhhHHHHhcCCCEEEEC
Confidence 4678 9999999999999999999998 88 78888887555433332 2221 0133566778899999999
Q ss_pred ecchhHHHHHHHH-HhcCCCCcEEEEe
Q 012479 186 ISDAAQADNYEKI-FSCMKPNSILGLS 211 (462)
Q Consensus 186 vpd~a~~~vl~eI-~~~Lk~gaiL~~a 211 (462)
||......+-..+ ...++++.+|.|+
T Consensus 183 Tp~Gm~~~~~~~l~~~~l~~~~~V~D~ 209 (277)
T 3don_A 183 TPAGMNGNTDSVISLNRLASHTLVSDI 209 (277)
T ss_dssp CC-------CCSSCCTTCCSSCEEEES
T ss_pred ccCCCCCCCcCCCCHHHcCCCCEEEEe
Confidence 9976443220001 2346677777665
No 197
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.70 E-value=0.00014 Score=72.00 Aligned_cols=83 Identities=12% Similarity=0.032 Sum_probs=61.1
Q ss_pred CEEEEEcccchHH-HHHHHHHHhhhhhcCCcEEE-EEecCCchhHHHHHHcC-ceecCCCcCCHhhhhc--cCCeEEEee
Q 012479 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAG-FTEENGTLGDIYETIS--GSDLVLLLI 186 (462)
Q Consensus 112 kkIgIIG~G~mG~-AiA~~Lrds~~~~g~G~~Vi-vg~r~~~~s~~~A~~~G-~~~~d~~~~~~~eav~--~ADvViLav 186 (462)
.+|||||+|.+|. .++.+|+.. +++++ +.++..++..+.+++.| ... ..+.+++++ +.|+|++++
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~------~~~lvav~d~~~~~~~~~a~~~~~~~~----~~~~~~ll~~~~~D~V~i~t 74 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDA------GAELAGVFESDSDNRAKFTSLFPSVPF----AASAEQLITDASIDLIACAV 74 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHT------TCEEEEEECSCTTSCHHHHHHSTTCCB----CSCHHHHHTCTTCCEEEECS
T ss_pred cEEEEECCChHHHHHhhhhhcCC------CcEEEEEeCCCHHHHHHHHHhcCCCcc----cCCHHHHhhCCCCCEEEEeC
Confidence 6899999999995 678888765 77754 44555555566677774 332 578899886 689999999
Q ss_pred cchhHHHHHHHHHhcCCCCcE
Q 012479 187 SDAAQADNYEKIFSCMKPNSI 207 (462)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~gai 207 (462)
|+..+.++....+ +.|+.
T Consensus 75 p~~~h~~~~~~al---~aGkh 92 (336)
T 2p2s_A 75 IPCDRAELALRTL---DAGKD 92 (336)
T ss_dssp CGGGHHHHHHHHH---HTTCE
T ss_pred ChhhHHHHHHHHH---HCCCc
Confidence 9999988776543 34653
No 198
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=97.70 E-value=6.1e-05 Score=75.04 Aligned_cols=97 Identities=18% Similarity=0.145 Sum_probs=61.5
Q ss_pred cccCCCC--EEEEEcccchHHHHHHHHHHhhhhh--cCCcEEEE-EecCCchhHHHHHHcCceecCCCcCCHhhhhc--c
Q 012479 106 DAFNGIN--QIGVIGWGSQGPAQAQNLRDSLAEA--KSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--G 178 (462)
Q Consensus 106 ~~l~gik--kIgIIG~G~mG~AiA~~Lrds~~~~--g~G~~Viv-g~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~--~ 178 (462)
.+++.|| ||||||+|.||..++.+++....-. -.+.+++. .++..++..+.+++.|+.. ...|.+|+++ +
T Consensus 18 ~~~~~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~---~y~d~~ell~~~~ 94 (393)
T 4fb5_A 18 LYFQSMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEK---ATADWRALIADPE 94 (393)
T ss_dssp ------CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSE---EESCHHHHHHCTT
T ss_pred ccccCCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCe---ecCCHHHHhcCCC
Confidence 4566655 6999999999999998876530000 00335443 4444556667788888742 1578999885 5
Q ss_pred CCeEEEeecchhHHHHHHHHHhcCCCCcEE
Q 012479 179 SDLVLLLISDAAQADNYEKIFSCMKPNSIL 208 (462)
Q Consensus 179 ADvViLavpd~a~~~vl~eI~~~Lk~gaiL 208 (462)
.|+|+++||+..+.++....+. .|+-|
T Consensus 95 iDaV~IatP~~~H~~~a~~al~---aGkhV 121 (393)
T 4fb5_A 95 VDVVSVTTPNQFHAEMAIAALE---AGKHV 121 (393)
T ss_dssp CCEEEECSCGGGHHHHHHHHHH---TTCEE
T ss_pred CcEEEECCChHHHHHHHHHHHh---cCCeE
Confidence 7999999999999988776443 45543
No 199
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.69 E-value=0.00011 Score=72.81 Aligned_cols=86 Identities=17% Similarity=0.190 Sum_probs=55.8
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecchhH
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~a~ 191 (462)
.||+|||+|+||..++..|++. .+++++...+.+.... ++.|+.. ....++.+. +++|+|++|+|+..+
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~-----~~~elvav~d~~~~~~---~~~g~~~--~~~~~l~~~-~~~DvViiatp~~~h 78 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREA-----PDFEIAGIVRRNPAEV---PFELQPF--RVVSDIEQL-ESVDVALVCSPSREV 78 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-----TTEEEEEEECC----------CCTTS--CEESSGGGS-SSCCEEEECSCHHHH
T ss_pred CEEEEECChHHHHHHHHHHhcC-----CCCEEEEEEcCCHHHH---HHcCCCc--CCHHHHHhC-CCCCEEEECCCchhh
Confidence 5899999999999999999874 1567653344433322 2256431 113344444 789999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEe
Q 012479 192 ADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 192 ~~vl~eI~~~Lk~gaiL~~a 211 (462)
.++.... ++.|+.|.+.
T Consensus 79 ~~~~~~a---l~aG~~Vi~e 95 (304)
T 3bio_A 79 ERTALEI---LKKGICTADS 95 (304)
T ss_dssp HHHHHHH---HTTTCEEEEC
T ss_pred HHHHHHH---HHcCCeEEEC
Confidence 8877654 4457765544
No 200
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.67 E-value=7.4e-05 Score=76.19 Aligned_cols=88 Identities=11% Similarity=0.026 Sum_probs=63.9
Q ss_pred CEEEEEcccc---hHHHHHHHHHHhhhhhcCCcEEEE--EecCCchhHHHHHHcCceecCCCcCCHhhhhcc-------C
Q 012479 112 NQIGVIGWGS---QGPAQAQNLRDSLAEAKSDIVVKV--GLRKGSRSFAEARAAGFTEENGTLGDIYETISG-------S 179 (462)
Q Consensus 112 kkIgIIG~G~---mG~AiA~~Lrds~~~~g~G~~Viv--g~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~-------A 179 (462)
.||||||+|. ||..++.+++... +++++. .++..++..+.+++.|+.. .....+.+|++++ .
T Consensus 13 ~rvgiiG~G~~~~ig~~h~~~~~~~~-----~~~lva~v~d~~~~~a~~~a~~~g~~~-~~~~~~~~~ll~~~~~~~~~v 86 (398)
T 3dty_A 13 IRWAMVGGGSQSQIGYIHRCAALRDN-----TFVLVAGAFDIDPIRGSAFGEQLGVDS-ERCYADYLSMFEQEARRADGI 86 (398)
T ss_dssp EEEEEEECCTTCSSHHHHHHHHHGGG-----SEEEEEEECCSSHHHHHHHHHHTTCCG-GGBCSSHHHHHHHHTTCTTCC
T ss_pred ceEEEEcCCccchhHHHHHHHHhhCC-----CeEEEEEEeCCCHHHHHHHHHHhCCCc-ceeeCCHHHHHhcccccCCCC
Confidence 5899999999 9999999988760 356653 3444445566677888831 1126789998865 8
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCCcEE
Q 012479 180 DLVLLLISDAAQADNYEKIFSCMKPNSIL 208 (462)
Q Consensus 180 DvViLavpd~a~~~vl~eI~~~Lk~gaiL 208 (462)
|+|++++|+..+.++....+. .|+-|
T Consensus 87 D~V~i~tp~~~H~~~~~~al~---aGkhV 112 (398)
T 3dty_A 87 QAVSIATPNGTHYSITKAALE---AGLHV 112 (398)
T ss_dssp SEEEEESCGGGHHHHHHHHHH---TTCEE
T ss_pred CEEEECCCcHHHHHHHHHHHH---CCCeE
Confidence 999999999999888776443 45543
No 201
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.65 E-value=6.3e-05 Score=76.40 Aligned_cols=79 Identities=13% Similarity=0.162 Sum_probs=60.5
Q ss_pred CEEEEEccc-chHHHHHHHHHHhhhhhcCCcEEEEEecCC-chhHHHHHHcCceecCCCcCCHhhhhcc--CCeEEEeec
Q 012479 112 NQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SRSFAEARAAGFTEENGTLGDIYETISG--SDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~G-~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~-~~s~~~A~~~G~~~~d~~~~~~~eav~~--ADvViLavp 187 (462)
.||||||+| .||..++.+|+.. .+++++...+.+ ++..+.+++.|+.. ..+.+|++++ .|+|++++|
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~g~~~----~~~~~ell~~~~vD~V~i~tp 73 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHH-----PDAQIVAACDPNEDVRERFGKEYGIPV----FATLAEMMQHVQMDAVYIASP 73 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHC-----TTEEEEEEECSCHHHHHHHHHHHTCCE----ESSHHHHHHHSCCSEEEECSC
T ss_pred eEEEEEeCCHHHHHHHHHHHHhC-----CCeEEEEEEeCCHHHHHHHHHHcCCCe----ECCHHHHHcCCCCCEEEEcCC
Confidence 589999999 9999999999875 155665444443 44445667778764 6789999874 999999999
Q ss_pred chhHHHHHHHHH
Q 012479 188 DAAQADNYEKIF 199 (462)
Q Consensus 188 d~a~~~vl~eI~ 199 (462)
+..+.++....+
T Consensus 74 ~~~H~~~~~~al 85 (387)
T 3moi_A 74 HQFHCEHVVQAS 85 (387)
T ss_dssp GGGHHHHHHHHH
T ss_pred cHHHHHHHHHHH
Confidence 999988777544
No 202
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.65 E-value=4.2e-05 Score=76.30 Aligned_cols=85 Identities=9% Similarity=0.171 Sum_probs=57.3
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecchhH
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~a~ 191 (462)
.||+|||+|+||..++.+|.++ .+++++...+.+... +.+ .|+.. ..++++++.++|+|++++|+..+
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~-----~~~elvav~d~~~~~-~~~--~gv~~----~~d~~~ll~~~DvViiatp~~~h 71 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQ-----PDMDLVGIFSRRATL-DTK--TPVFD----VADVDKHADDVDVLFLCMGSATD 71 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC-----SSEEEEEEEESSSCC-SSS--SCEEE----GGGGGGTTTTCSEEEECSCTTTH
T ss_pred CEEEEEeecHHHHHHHHHHhcC-----CCCEEEEEEcCCHHH-hhc--CCCce----eCCHHHHhcCCCEEEEcCCcHHH
Confidence 5899999999999999999875 145554333333222 222 46543 45677777889999999999887
Q ss_pred HHHHHHHHhcCCCCcEEEEe
Q 012479 192 ADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 192 ~~vl~eI~~~Lk~gaiL~~a 211 (462)
.+.+. ..++.|..|.+.
T Consensus 72 ~~~~~---~al~aG~~Vv~e 88 (320)
T 1f06_A 72 IPEQA---PKFAQFACTVDT 88 (320)
T ss_dssp HHHHH---HHHTTTSEEECC
T ss_pred HHHHH---HHHHCCCEEEEC
Confidence 55544 344567755443
No 203
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=97.65 E-value=0.00024 Score=71.27 Aligned_cols=88 Identities=19% Similarity=0.146 Sum_probs=57.1
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHH-------c--C--ceecCCCcCCHhhhhccC
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA-------A--G--FTEENGTLGDIYETISGS 179 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~-------~--G--~~~~d~~~~~~~eav~~A 179 (462)
+||+|||.|+||.++|..|... |+ +|++.++..++....+.. . . +.. +.+. +++++|
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~------g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~----t~d~-~al~~a 83 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK------DLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG----ENNY-EYLQNS 83 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE----ESCG-GGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE----CCCH-HHHCCC
Confidence 6999999999999999999988 88 866655543322211111 0 1 111 2456 789999
Q ss_pred CeEEEee--cc--------------hhHHHHHHHHHhcCCCCcEEEEe
Q 012479 180 DLVLLLI--SD--------------AAQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 180 DvViLav--pd--------------~a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
|+||+++ |. ....+++++|.++. |+.+|.++
T Consensus 84 D~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~ 130 (328)
T 2hjr_A 84 DVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICI 130 (328)
T ss_dssp SEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred CEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEe
Confidence 9999998 42 11344566666665 66665443
No 204
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.62 E-value=4.8e-05 Score=77.52 Aligned_cols=94 Identities=15% Similarity=0.101 Sum_probs=63.6
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCC-CcCCHhhhhccCCeEEEeec
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG-TLGDIYETISGSDLVLLLIS 187 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~-~~~~~~eav~~ADvViLavp 187 (462)
++ ++|+|||+|.||.+++..|.+. .+|.+++|+.++..+.+...+....|- ...+..++++++|+||.++|
T Consensus 15 ~~-~~v~IiGaG~iG~~ia~~L~~~-------~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P 86 (365)
T 2z2v_A 15 RH-MKVLILGAGNIGRAIAWDLKDE-------FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALP 86 (365)
T ss_dssp -C-CEEEEECCSHHHHHHHHHHTTT-------SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCC
T ss_pred CC-CeEEEEcCCHHHHHHHHHHHcC-------CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCC
Confidence 45 8999999999999999999764 468888886554444333322121010 01245678899999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEecc
Q 012479 188 DAAQADNYEKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 188 d~a~~~vl~eI~~~Lk~gaiL~~a~G 213 (462)
+..+..+... .++.|+.+++.+.
T Consensus 87 ~~~~~~v~~a---~l~~G~~~vD~s~ 109 (365)
T 2z2v_A 87 GFLGFKSIKA---AIKSKVDMVDVSF 109 (365)
T ss_dssp HHHHHHHHHH---HHHTTCCEEECCC
T ss_pred hhhhHHHHHH---HHHhCCeEEEccC
Confidence 9877766554 3456777776664
No 205
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.61 E-value=0.00012 Score=77.63 Aligned_cols=92 Identities=20% Similarity=0.210 Sum_probs=71.4
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEee
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLav 186 (462)
.|.| ++++|+|+|.+|.++|+.|+.. |.+|++.++. +.....+...|+. +.+.+++++.+|+|+.++
T Consensus 262 ~L~G-KtVvVtGaGgIG~aiA~~Laa~------GA~Viv~D~~-~~~a~~Aa~~g~d-----v~~lee~~~~aDvVi~at 328 (488)
T 3ond_A 262 MIAG-KVAVVAGYGDVGKGCAAALKQA------GARVIVTEID-PICALQATMEGLQ-----VLTLEDVVSEADIFVTTT 328 (488)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCE-----ECCGGGTTTTCSEEEECS
T ss_pred cccC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCC-HHHHHHHHHhCCc-----cCCHHHHHHhcCEEEeCC
Confidence 4789 9999999999999999999998 9988776554 4445566677876 467889999999999887
Q ss_pred cchhHHHHH-HHHHhcCCCCcEEEEeccc
Q 012479 187 SDAAQADNY-EKIFSCMKPNSILGLSHGF 214 (462)
Q Consensus 187 pd~a~~~vl-~eI~~~Lk~gaiL~~a~G~ 214 (462)
.... ++ .+....|+++.+|+.++.+
T Consensus 329 G~~~---vl~~e~l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 329 GNKD---IIMLDHMKKMKNNAIVCNIGHF 354 (488)
T ss_dssp SCSC---SBCHHHHTTSCTTEEEEESSST
T ss_pred CChh---hhhHHHHHhcCCCeEEEEcCCC
Confidence 5332 23 2466789999988876644
No 206
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.61 E-value=8.1e-05 Score=75.55 Aligned_cols=99 Identities=13% Similarity=0.077 Sum_probs=67.6
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHH-cCceec-C-CCcCCHhhhhccCCeE
Q 012479 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-AGFTEE-N-GTLGDIYETISGSDLV 182 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~-~G~~~~-d-~~~~~~~eav~~ADvV 182 (462)
..+++ ++|+|||.|.+|.++++.++.. |.+|++.+++.. ..+.+.+ .|.... + ....+.+++++++|+|
T Consensus 162 ~~l~~-~~V~ViGaG~iG~~~a~~l~~~------Ga~V~~~d~~~~-~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvV 233 (369)
T 2eez_A 162 PGVAP-ASVVILGGGTVGTNAAKIALGM------GAQVTILDVNHK-RLQYLDDVFGGRVITLTATEANIKKSVQHADLL 233 (369)
T ss_dssp TBBCC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCHH-HHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEE
T ss_pred CCCCC-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEECCHH-HHHHHHHhcCceEEEecCCHHHHHHHHhCCCEE
Confidence 35888 9999999999999999999988 988877766533 3444443 443210 0 0022456788899999
Q ss_pred EEeecchh--HHH-HHHHHHhcCCCCcEEEEec
Q 012479 183 LLLISDAA--QAD-NYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 183 iLavpd~a--~~~-vl~eI~~~Lk~gaiL~~a~ 212 (462)
|.+++... ... +.++..+.|++|.+|++.+
T Consensus 234 i~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 234 IGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp EECCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred EECCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 99998542 122 2356778899998887665
No 207
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.60 E-value=0.0003 Score=69.81 Aligned_cols=70 Identities=19% Similarity=0.096 Sum_probs=45.8
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHH--HcCc-------eecCCCcCCHhhhhccCCeE
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR--AAGF-------TEENGTLGDIYETISGSDLV 182 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~--~~G~-------~~~d~~~~~~~eav~~ADvV 182 (462)
+||+|||.|++|.++|..|... +.|.+|++.++...+....+. ..+. .. ..+.+.++ +++||+|
T Consensus 1 mkI~VIGaG~vG~~la~~la~~----~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i--~~t~d~~~-l~~aDvV 73 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEK----QLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKV--TGSNDYAD-TANSDIV 73 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEE--EEESCGGG-GTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEE--EECCCHHH-HCCCCEE
Confidence 5899999999999999999875 115677766665433222221 1110 10 01245655 8999999
Q ss_pred EEeecc
Q 012479 183 LLLISD 188 (462)
Q Consensus 183 iLavpd 188 (462)
|+++|.
T Consensus 74 iiav~~ 79 (310)
T 1guz_A 74 IITAGL 79 (310)
T ss_dssp EECCSC
T ss_pred EEeCCC
Confidence 999964
No 208
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.58 E-value=0.00043 Score=60.72 Aligned_cols=96 Identities=13% Similarity=0.006 Sum_probs=60.5
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhH---HHHHHcCceecCCCcCC---Hhhh-hccCCeEEE
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF---AEARAAGFTEENGTLGD---IYET-ISGSDLVLL 184 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~---~~A~~~G~~~~d~~~~~---~~ea-v~~ADvViL 184 (462)
++|.|+|+|.+|..+++.|.+. |++|++..+...+.. ......|+....+...+ ..++ ++++|+|++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~------g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQR------GQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILA 77 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHC------CCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEE
Confidence 6899999999999999999998 888877766433222 22223354321111222 2344 789999999
Q ss_pred eecchhHHHHHHHHHhcCCC-CcEEEEecc
Q 012479 185 LISDAAQADNYEKIFSCMKP-NSILGLSHG 213 (462)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~-gaiL~~a~G 213 (462)
++++......+..++..+.+ ..++..+.+
T Consensus 78 ~~~~d~~n~~~~~~a~~~~~~~~ii~~~~~ 107 (153)
T 1id1_A 78 LSDNDADNAFVVLSAKDMSSDVKTVLAVSD 107 (153)
T ss_dssp CSSCHHHHHHHHHHHHHHTSSSCEEEECSS
T ss_pred ecCChHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 99987665555444444423 345554443
No 209
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.58 E-value=0.00031 Score=70.59 Aligned_cols=93 Identities=12% Similarity=0.058 Sum_probs=59.0
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHH-------cCceecCCCcCCHhhhhccCCeEE
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA-------AGFTEENGTLGDIYETISGSDLVL 183 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~-------~G~~~~d~~~~~~~eav~~ADvVi 183 (462)
+||+|||.|.+|.++|..|... |+ +|++.++..++....+.. .+....=..+.+.++++++||+||
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~------g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi 83 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR------ELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVI 83 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEE
Confidence 6999999999999999999988 87 866665543322221111 111100001357777999999999
Q ss_pred Eee--cch--h-----------------HHHHHHHHHhcCCCCcEEEEe
Q 012479 184 LLI--SDA--A-----------------QADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 184 Lav--pd~--a-----------------~~~vl~eI~~~Lk~gaiL~~a 211 (462)
+++ |.. . ..+++++|..+. |+.+|..+
T Consensus 84 ~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~ 131 (331)
T 1pzg_A 84 VTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVV 131 (331)
T ss_dssp ECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred EccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEE
Confidence 998 521 1 344556666664 66665544
No 210
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.57 E-value=0.00011 Score=73.20 Aligned_cols=90 Identities=20% Similarity=0.203 Sum_probs=61.1
Q ss_pred EEEEEcccchHHHHHHHHHHhhh--hhcCCcEEEE-EecCCchhHHHHHHcCceecCCCcCCHhhhhc--cCCeEEEeec
Q 012479 113 QIGVIGWGSQGPAQAQNLRDSLA--EAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLIS 187 (462)
Q Consensus 113 kIgIIG~G~mG~AiA~~Lrds~~--~~g~G~~Viv-g~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~--~ADvViLavp 187 (462)
+|||||+|.||..++.+++.... ....+.+++. .++..++..+.+++.|+.. ...|.+|+++ +.|+|+++||
T Consensus 8 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~---~~~d~~~ll~~~~iDaV~I~tP 84 (390)
T 4h3v_A 8 GIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWST---TETDWRTLLERDDVQLVDVCTP 84 (390)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSE---EESCHHHHTTCTTCSEEEECSC
T ss_pred cEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEEeCC
Confidence 78999999999999999886410 0000124443 3444445556777788742 1578999885 5799999999
Q ss_pred chhHHHHHHHHHhcCCCCcEE
Q 012479 188 DAAQADNYEKIFSCMKPNSIL 208 (462)
Q Consensus 188 d~a~~~vl~eI~~~Lk~gaiL 208 (462)
+..|.++....+ +.|+-|
T Consensus 85 ~~~H~~~~~~al---~aGkhV 102 (390)
T 4h3v_A 85 GDSHAEIAIAAL---EAGKHV 102 (390)
T ss_dssp GGGHHHHHHHHH---HTTCEE
T ss_pred hHHHHHHHHHHH---HcCCCc
Confidence 999998877543 345543
No 211
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.55 E-value=0.00012 Score=75.23 Aligned_cols=87 Identities=16% Similarity=0.196 Sum_probs=62.8
Q ss_pred CEEEEEcccc---hHHHHHHHHHHhhhhhcCC-cEEEE--EecCCchhHHHHHHcCceecCCCcCCHhhhhcc-------
Q 012479 112 NQIGVIGWGS---QGPAQAQNLRDSLAEAKSD-IVVKV--GLRKGSRSFAEARAAGFTEENGTLGDIYETISG------- 178 (462)
Q Consensus 112 kkIgIIG~G~---mG~AiA~~Lrds~~~~g~G-~~Viv--g~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~------- 178 (462)
.||||||+|. ||..++..++.. + ++++. .++..++..+.+++.|+.. .....+.++++++
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~------~~~~lva~v~d~~~~~a~~~a~~~g~~~-~~~~~~~~~ll~~~~~~~~~ 110 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLD------DHYELVAGALSSTPEKAEASGRELGLDP-SRVYSDFKEMAIREAKLKNG 110 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHT------SCEEEEEEECCSSHHHHHHHHHHHTCCG-GGBCSCHHHHHHHHHHCTTC
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhC------CCcEEEEEEeCCCHHHHHHHHHHcCCCc-ccccCCHHHHHhcccccCCC
Confidence 5899999999 999999998876 4 56553 3444445566677788741 1126789998876
Q ss_pred CCeEEEeecchhHHHHHHHHHhcCCCCcEE
Q 012479 179 SDLVLLLISDAAQADNYEKIFSCMKPNSIL 208 (462)
Q Consensus 179 ADvViLavpd~a~~~vl~eI~~~Lk~gaiL 208 (462)
.|+|++++|+..+.++.... |+.|+-|
T Consensus 111 vD~V~I~tp~~~H~~~~~~a---l~aGkhV 137 (417)
T 3v5n_A 111 IEAVAIVTPNHVHYAAAKEF---LKRGIHV 137 (417)
T ss_dssp CSEEEECSCTTSHHHHHHHH---HTTTCEE
T ss_pred CcEEEECCCcHHHHHHHHHH---HhCCCeE
Confidence 89999999999998877654 3456643
No 212
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.54 E-value=2.7e-05 Score=76.87 Aligned_cols=74 Identities=16% Similarity=0.130 Sum_probs=56.8
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHHcCc---eecCCCcCCHhhhhccCCeE
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGF---TEENGTLGDIYETISGSDLV 182 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~---~~~d~~~~~~~eav~~ADvV 182 (462)
.++| +++.|||.|-+|.+++..|.+. |. +|.+.+|..++..+.+++.+- .. ..+.+++.+++|+|
T Consensus 123 ~l~~-k~vlvlGaGg~g~aia~~L~~~------G~~~v~v~~R~~~~a~~la~~~~~~~~~~----~~~~~~l~~~aDiI 191 (281)
T 3o8q_A 123 LLKG-ATILLIGAGGAARGVLKPLLDQ------QPASITVTNRTFAKAEQLAELVAAYGEVK----AQAFEQLKQSYDVI 191 (281)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHTT------CCSEEEEEESSHHHHHHHHHHHGGGSCEE----EEEGGGCCSCEEEE
T ss_pred CccC-CEEEEECchHHHHHHHHHHHhc------CCCeEEEEECCHHHHHHHHHHhhccCCee----EeeHHHhcCCCCEE
Confidence 4678 9999999999999999999998 96 888888876665566655432 11 23455655889999
Q ss_pred EEeecchhH
Q 012479 183 LLLISDAAQ 191 (462)
Q Consensus 183 iLavpd~a~ 191 (462)
|.+||....
T Consensus 192 InaTp~gm~ 200 (281)
T 3o8q_A 192 INSTSASLD 200 (281)
T ss_dssp EECSCCCC-
T ss_pred EEcCcCCCC
Confidence 999998754
No 213
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.53 E-value=0.00013 Score=75.48 Aligned_cols=88 Identities=10% Similarity=0.120 Sum_probs=60.6
Q ss_pred CEEEEEcccchHH-HHHHHHHHhhhhhcCCcEEEE-EecCCchhHHHHHHcCceecC-CCcCCHhhhhc--cCCeEEEee
Q 012479 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEEN-GTLGDIYETIS--GSDLVLLLI 186 (462)
Q Consensus 112 kkIgIIG~G~mG~-AiA~~Lrds~~~~g~G~~Viv-g~r~~~~s~~~A~~~G~~~~d-~~~~~~~eav~--~ADvViLav 186 (462)
.||||||+|.||. .++.+|++. .+++++. .++...+..+.+++.|+...+ ....+.+++++ +.|+|++++
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~-----~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iat 158 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGC-----QHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIIL 158 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTC-----SSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECS
T ss_pred eEEEEECCcHHHHHHHHHHHhhC-----CCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcC
Confidence 6899999999997 899998764 0456543 344333444556667763100 01568888886 789999999
Q ss_pred cchhHHHHHHHHHhcCCCCcE
Q 012479 187 SDAAQADNYEKIFSCMKPNSI 207 (462)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~gai 207 (462)
|+..+.++..... +.|+-
T Consensus 159 p~~~h~~~~~~al---~aGk~ 176 (433)
T 1h6d_A 159 PNSLHAEFAIRAF---KAGKH 176 (433)
T ss_dssp CGGGHHHHHHHHH---HTTCE
T ss_pred CchhHHHHHHHHH---HCCCc
Confidence 9999988877543 34553
No 214
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.51 E-value=0.00026 Score=66.46 Aligned_cols=93 Identities=12% Similarity=0.188 Sum_probs=62.1
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHh---hh-hccCCeEEEeec
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY---ET-ISGSDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~---ea-v~~ADvViLavp 187 (462)
++|.|+|+|.+|..+++.|.+. |+ |++.. .++...+.+. .|+....+...+.+ ++ +++||.||++++
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~------g~-v~vid-~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGS------EV-FVLAE-DENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLE 80 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTS------EE-EEEES-CGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCS
T ss_pred CEEEEECCChHHHHHHHHHHhC------Ce-EEEEE-CCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCC
Confidence 7899999999999999999988 87 66554 4444455555 66532111122322 33 789999999999
Q ss_pred chhHHHHHHHHHhcCCCC-cEEEEecc
Q 012479 188 DAAQADNYEKIFSCMKPN-SILGLSHG 213 (462)
Q Consensus 188 d~a~~~vl~eI~~~Lk~g-aiL~~a~G 213 (462)
+..........+..+.++ .++..+..
T Consensus 81 ~d~~n~~~~~~a~~~~~~~~iia~~~~ 107 (234)
T 2aef_A 81 SDSETIHCILGIRKIDESVRIIAEAER 107 (234)
T ss_dssp CHHHHHHHHHHHHHHCSSSEEEEECSS
T ss_pred CcHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 876655444445555665 56666654
No 215
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.51 E-value=0.00018 Score=71.27 Aligned_cols=85 Identities=8% Similarity=0.064 Sum_probs=59.8
Q ss_pred CCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHc-CceecCCCcCCHhhhh----------cc
Q 012479 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETI----------SG 178 (462)
Q Consensus 111 ikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~-G~~~~d~~~~~~~eav----------~~ 178 (462)
|.||||||+ |.+|..++..|++. +.+++...+.+......++.. +... ..+.++++ ++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~------~~~lvav~d~~~~~~~~~~~~~~~~~----~~~~~~ll~~~~~l~~~~~~ 72 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEV------GGVLVASLDPATNVGLVDSFFPEAEF----FTEPEAFEAYLEDLRDRGEG 72 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHT------TCEEEEEECSSCCCGGGGGTCTTCEE----ESCHHHHHHHHHHHHHTTCC
T ss_pred ceEEEEECCChHHHHHHHHHHHhC------CCEEEEEEcCCHHHHHHHhhCCCCce----eCCHHHHHHHhhhhcccCCC
Confidence 479999999 78999999999987 776655555443332223332 2232 56777776 67
Q ss_pred CCeEEEeecchhHHHHHHHHHhcCCCCcEE
Q 012479 179 SDLVLLLISDAAQADNYEKIFSCMKPNSIL 208 (462)
Q Consensus 179 ADvViLavpd~a~~~vl~eI~~~Lk~gaiL 208 (462)
.|+|++++|+..+.++....+ +.|+-|
T Consensus 73 vD~V~I~tP~~~H~~~~~~al---~aGkhV 99 (312)
T 3o9z_A 73 VDYLSIASPNHLHYPQIRMAL---RLGANA 99 (312)
T ss_dssp CSEEEECSCGGGHHHHHHHHH---HTTCEE
T ss_pred CcEEEECCCchhhHHHHHHHH---HCCCeE
Confidence 899999999999988877644 345543
No 216
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=97.51 E-value=0.00015 Score=74.29 Aligned_cols=68 Identities=15% Similarity=0.106 Sum_probs=51.5
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhc-cCCeEEEe
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLL 185 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~-~ADvViLa 185 (462)
.|+| ++|+|+|+|+||..+|+.|.+. |.+|++.++...+..+.+.+.|... .+.+++.. +||+++.|
T Consensus 170 ~L~G-ktV~V~G~G~VG~~~A~~L~~~------GakVvv~D~~~~~l~~~a~~~ga~~-----v~~~~ll~~~~DIvip~ 237 (364)
T 1leh_A 170 SLEG-LAVSVQGLGNVAKALCKKLNTE------GAKLVVTDVNKAAVSAAVAEEGADA-----VAPNAIYGVTCDIFAPC 237 (364)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHHHHHHHHHHHCCEE-----CCGGGTTTCCCSEEEEC
T ss_pred CCCc-CEEEEECchHHHHHHHHHHHHC------CCEEEEEcCCHHHHHHHHHHcCCEE-----EChHHHhccCCcEeecc
Confidence 6899 9999999999999999999998 9998876655444444566556542 34455544 89999876
Q ss_pred e
Q 012479 186 I 186 (462)
Q Consensus 186 v 186 (462)
.
T Consensus 238 a 238 (364)
T 1leh_A 238 A 238 (364)
T ss_dssp S
T ss_pred c
Confidence 4
No 217
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=97.51 E-value=0.00012 Score=72.52 Aligned_cols=91 Identities=12% Similarity=0.214 Sum_probs=67.3
Q ss_pred CEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhc--cCCeEEEeecc
Q 012479 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (462)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~--~ADvViLavpd 188 (462)
.+|+|+|. |.||..++++|++. |++++....+..... +-.|+.. ..+++|+.+ ..|++++++|+
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~------g~~~V~~VnP~~~g~---~i~G~~v----y~sl~el~~~~~~Dv~ii~vp~ 80 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLEC------GTKIVGGVTPGKGGQ---NVHGVPV----FDTVKEAVKETDANASVIFVPA 80 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT------TCCEEEEECTTCTTC---EETTEEE----ESSHHHHHHHHCCCEEEECCCH
T ss_pred CEEEEECCCCCHHHHHHHHHHhC------CCeEEEEeCCCCCCc---eECCEee----eCCHHHHhhcCCCCEEEEccCH
Confidence 46788898 99999999999998 887554554321100 1257765 578889888 89999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEeccchH
Q 012479 189 AAQADNYEKIFSCMKPNSILGLSHGFLL 216 (462)
Q Consensus 189 ~a~~~vl~eI~~~Lk~gaiL~~a~G~~i 216 (462)
..+.+++++.... ....+|.++.||..
T Consensus 81 ~~~~~~v~ea~~~-Gi~~vVi~t~G~~~ 107 (294)
T 2yv1_A 81 PFAKDAVFEAIDA-GIELIVVITEHIPV 107 (294)
T ss_dssp HHHHHHHHHHHHT-TCSEEEECCSCCCH
T ss_pred HHHHHHHHHHHHC-CCCEEEEECCCCCH
Confidence 9999999986653 22336678889864
No 218
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.48 E-value=0.00018 Score=73.36 Aligned_cols=91 Identities=18% Similarity=0.143 Sum_probs=62.6
Q ss_pred CEEEEEcccchHHHHHHHHHHhhh---hhcCCcEEEEE-ecCCchhHHHHHHcCceecCCCcCCHhhhhc--cCCeEEEe
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLA---EAKSDIVVKVG-LRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLL 185 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~---~~g~G~~Vivg-~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~--~ADvViLa 185 (462)
.||||||+|.||..++.++++... +...+.+++.. ++..++..+.|++.|+.. ...|.+|+++ +.|+|+++
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~---~y~d~~~ll~~~~vD~V~I~ 103 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEK---AYGDWRELVNDPQVDVVDIT 103 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSE---EESSHHHHHHCTTCCEEEEC
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCe---EECCHHHHhcCCCCCEEEEC
Confidence 379999999999999999987510 00012355433 344445556677788742 1578999885 57999999
Q ss_pred ecchhHHHHHHHHHhcCCCCcEE
Q 012479 186 ISDAAQADNYEKIFSCMKPNSIL 208 (462)
Q Consensus 186 vpd~a~~~vl~eI~~~Lk~gaiL 208 (462)
+|+..+.++..+.+ +.|+-|
T Consensus 104 tp~~~H~~~~~~al---~aGkhV 123 (412)
T 4gqa_A 104 SPNHLHYTMAMAAI---AAGKHV 123 (412)
T ss_dssp SCGGGHHHHHHHHH---HTTCEE
T ss_pred CCcHHHHHHHHHHH---HcCCCe
Confidence 99999998876543 345543
No 219
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.47 E-value=0.00021 Score=71.04 Aligned_cols=85 Identities=8% Similarity=0.044 Sum_probs=59.5
Q ss_pred CCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHc-CceecCCCcCCHhhhh-----------c
Q 012479 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETI-----------S 177 (462)
Q Consensus 111 ikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~-G~~~~d~~~~~~~eav-----------~ 177 (462)
|.||||||+ |.+|..++.+|++. +.+++...+.+......+... +... ..+.++++ +
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~------~~~lvav~d~~~~~~~~~~~~~~~~~----~~~~~~ll~~~~~l~~~~~~ 72 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT------GNCLVSAYDINDSVGIIDSISPQSEF----FTEFEFFLDHASNLKRDSAT 72 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT------TCEEEEEECSSCCCGGGGGTCTTCEE----ESSHHHHHHHHHHHTTSTTT
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC------CCEEEEEEcCCHHHHHHHhhCCCCcE----ECCHHHHHHhhhhhhhccCC
Confidence 479999999 79999999999987 776655555443322223333 2232 56777776 5
Q ss_pred cCCeEEEeecchhHHHHHHHHHhcCCCCcEE
Q 012479 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSIL 208 (462)
Q Consensus 178 ~ADvViLavpd~a~~~vl~eI~~~Lk~gaiL 208 (462)
+.|+|++++|+..+.++...... .|+-|
T Consensus 73 ~vD~V~I~tP~~~H~~~~~~al~---aGkhV 100 (318)
T 3oa2_A 73 ALDYVSICSPNYLHYPHIAAGLR---LGCDV 100 (318)
T ss_dssp SCCEEEECSCGGGHHHHHHHHHH---TTCEE
T ss_pred CCcEEEECCCcHHHHHHHHHHHH---CCCeE
Confidence 78999999999999888776543 45543
No 220
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=97.46 E-value=0.00021 Score=70.94 Aligned_cols=91 Identities=13% Similarity=0.241 Sum_probs=66.6
Q ss_pred CEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhc--c-CCeEEEeec
Q 012479 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--G-SDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~--~-ADvViLavp 187 (462)
.+|+|+|. |.||..++++|++. |++++....+...-. +-.|+.. ..+++|+.+ . .|++++++|
T Consensus 14 ~~vvV~Gasg~~G~~~~~~l~~~------g~~~v~~VnP~~~g~---~i~G~~v----y~sl~el~~~~~~~DvaIi~vp 80 (297)
T 2yv2_A 14 TRVLVQGITGREGSFHAKAMLEY------GTKVVAGVTPGKGGS---EVHGVPV----YDSVKEALAEHPEINTSIVFVP 80 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH------TCEEEEEECTTCTTC---EETTEEE----ESSHHHHHHHCTTCCEEEECCC
T ss_pred CEEEEECCCCCHHHHHHHHHHhC------CCcEEEEeCCCCCCc---eECCEee----eCCHHHHhhcCCCCCEEEEecC
Confidence 46777798 99999999999998 888555554432100 1257765 578888876 5 999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEeccchH
Q 012479 188 DAAQADNYEKIFSCMKPNSILGLSHGFLL 216 (462)
Q Consensus 188 d~a~~~vl~eI~~~Lk~gaiL~~a~G~~i 216 (462)
+..+.+++++.... .-..+|.++.||..
T Consensus 81 ~~~~~~~v~ea~~~-Gi~~vVi~t~G~~~ 108 (297)
T 2yv2_A 81 APFAPDAVYEAVDA-GIRLVVVITEGIPV 108 (297)
T ss_dssp GGGHHHHHHHHHHT-TCSEEEECCCCCCH
T ss_pred HHHHHHHHHHHHHC-CCCEEEEECCCCCH
Confidence 99999999986653 22336678889854
No 221
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=97.44 E-value=0.00036 Score=69.50 Aligned_cols=70 Identities=20% Similarity=0.202 Sum_probs=44.7
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc--EEEEEecCCchhHHHHHHcCceecCCC-------cCCHhhhhccCCeE
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAAGFTEENGT-------LGDIYETISGSDLV 182 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~--~Vivg~r~~~~s~~~A~~~G~~~~d~~-------~~~~~eav~~ADvV 182 (462)
+||+|||.|++|.++|..|+.. |+ +++.. +.+.. ...+...++...... ..+..+++++||+|
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~------~~~~ev~l~-Di~~~-~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvV 78 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ------GIADEIVLI-DANES-KAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLV 78 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEE-CSSHH-HHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCCCEEEEE-eCCcc-hHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEE
Confidence 7999999999999999999887 64 55544 44332 222222222110000 12345789999999
Q ss_pred EEeecch
Q 012479 183 LLLISDA 189 (462)
Q Consensus 183 iLavpd~ 189 (462)
|++++..
T Consensus 79 iia~~~~ 85 (316)
T 1ldn_A 79 VICAGAN 85 (316)
T ss_dssp EECCSCC
T ss_pred EEcCCCC
Confidence 9997644
No 222
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.43 E-value=0.00027 Score=70.44 Aligned_cols=86 Identities=15% Similarity=0.145 Sum_probs=61.7
Q ss_pred CEEEEEccc-chHHHHHHHHHHhhhhhcCCcEEEEEecC-CchhHHHHHHcCc-eecCCCcCCHhhhhc--cCCeEEEee
Q 012479 112 NQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARAAGF-TEENGTLGDIYETIS--GSDLVLLLI 186 (462)
Q Consensus 112 kkIgIIG~G-~mG~AiA~~Lrds~~~~g~G~~Vivg~r~-~~~s~~~A~~~G~-~~~d~~~~~~~eav~--~ADvViLav 186 (462)
.+|||||+| .+|..++..|++. +.+++++...+. .++..+.+++.|. .. ..|.+|+++ +.|+|++++
T Consensus 19 irvgiIG~G~~~g~~~~~~l~~~----~~~~~lvav~d~~~~~~~~~a~~~~~~~~----~~~~~~ll~~~~vD~V~i~t 90 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPALKNL----SHLFEITAVTSRTRSHAEEFAKMVGNPAV----FDSYEELLESGLVDAVDLTL 90 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTT----TTTEEEEEEECSSHHHHHHHHHHHSSCEE----ESCHHHHHHSSCCSEEEECC
T ss_pred eeEEEEecCHHHHHHHHHHHHhC----CCceEEEEEEcCCHHHHHHHHHHhCCCcc----cCCHHHHhcCCCCCEEEEeC
Confidence 589999999 8999999999864 114565443444 3444456677776 32 678999886 589999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEE
Q 012479 187 SDAAQADNYEKIFSCMKPNSIL 208 (462)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~gaiL 208 (462)
|+..+.++..+.+ +.|+-|
T Consensus 91 p~~~H~~~~~~al---~aGkhV 109 (340)
T 1zh8_A 91 PVELNLPFIEKAL---RKGVHV 109 (340)
T ss_dssp CGGGHHHHHHHHH---HTTCEE
T ss_pred CchHHHHHHHHHH---HCCCcE
Confidence 9999988776543 345543
No 223
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.42 E-value=0.00011 Score=72.17 Aligned_cols=73 Identities=10% Similarity=0.084 Sum_probs=55.9
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHHcCc---eecCCCcCCHhhhh-ccCCe
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGF---TEENGTLGDIYETI-SGSDL 181 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~---~~~d~~~~~~~eav-~~ADv 181 (462)
.++| +++.|||.|-+|.+++..|.+. |. +|.+..|+.++..+.+++.+. . ..+.+++. .++|+
T Consensus 117 ~l~~-k~~lvlGaGg~~~aia~~L~~~------G~~~v~i~~R~~~~a~~la~~~~~~~~~-----~~~~~~l~~~~~Di 184 (272)
T 3pwz_A 117 PLRN-RRVLLLGAGGAVRGALLPFLQA------GPSELVIANRDMAKALALRNELDHSRLR-----ISRYEALEGQSFDI 184 (272)
T ss_dssp CCTT-SEEEEECCSHHHHHHHHHHHHT------CCSEEEEECSCHHHHHHHHHHHCCTTEE-----EECSGGGTTCCCSE
T ss_pred CccC-CEEEEECccHHHHHHHHHHHHc------CCCEEEEEeCCHHHHHHHHHHhccCCee-----EeeHHHhcccCCCE
Confidence 4678 9999999999999999999998 96 888888876666666666542 2 12333332 78999
Q ss_pred EEEeecchhH
Q 012479 182 VLLLISDAAQ 191 (462)
Q Consensus 182 ViLavpd~a~ 191 (462)
||.+||....
T Consensus 185 vInaTp~gm~ 194 (272)
T 3pwz_A 185 VVNATSASLT 194 (272)
T ss_dssp EEECSSGGGG
T ss_pred EEECCCCCCC
Confidence 9999997654
No 224
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.42 E-value=5.8e-05 Score=73.48 Aligned_cols=76 Identities=13% Similarity=-0.003 Sum_probs=53.3
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCc--eecCCCcCCHhhhhc-cCCeEE
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF--TEENGTLGDIYETIS-GSDLVL 183 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~--~~~d~~~~~~~eav~-~ADvVi 183 (462)
.++| ++|.|||.|.||.+++..|.+. |.+|++.+|+.++..+.+.+.+. .. ...+.+++.+ ++|+||
T Consensus 116 ~~~~-~~vlvlGaGg~g~a~a~~L~~~------G~~v~v~~R~~~~a~~l~~~~~~~~~~---~~~~~~~~~~~~~DivI 185 (272)
T 1p77_A 116 LRPN-QHVLILGAGGATKGVLLPLLQA------QQNIVLANRTFSKTKELAERFQPYGNI---QAVSMDSIPLQTYDLVI 185 (272)
T ss_dssp CCTT-CEEEEECCSHHHHTTHHHHHHT------TCEEEEEESSHHHHHHHHHHHGGGSCE---EEEEGGGCCCSCCSEEE
T ss_pred CcCC-CEEEEECCcHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHccccCCe---EEeeHHHhccCCCCEEE
Confidence 4678 9999999999999999999998 88898888876655555554332 10 0123344434 899999
Q ss_pred EeecchhHH
Q 012479 184 LLISDAAQA 192 (462)
Q Consensus 184 Lavpd~a~~ 192 (462)
.++|.....
T Consensus 186 n~t~~~~~~ 194 (272)
T 1p77_A 186 NATSAGLSG 194 (272)
T ss_dssp ECCCC----
T ss_pred ECCCCCCCC
Confidence 999987653
No 225
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.42 E-value=0.00028 Score=70.59 Aligned_cols=84 Identities=14% Similarity=0.168 Sum_probs=59.1
Q ss_pred CEEEEEcccchHH-HHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHH---cCceecCCCcCCHhhhhcc--CCeEEEe
Q 012479 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA---AGFTEENGTLGDIYETISG--SDLVLLL 185 (462)
Q Consensus 112 kkIgIIG~G~mG~-AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~---~G~~~~d~~~~~~~eav~~--ADvViLa 185 (462)
.||||||+|.||. .++..|+.. .+++++...+.+ +..+.+.+ .|... ..+.++++++ .|+|+++
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~-~~~~~a~~~~~~~~~~----~~~~~~ll~~~~~D~V~i~ 72 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIR-----ETLEVKTIFDLH-VNEKAAAPFKEKGVNF----TADLNELLTDPEIELITIC 72 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTC-----TTEEEEEEECTT-CCHHHHHHHHTTTCEE----ESCTHHHHSCTTCCEEEEC
T ss_pred eEEEEEccCHHHHHHHHHHHhhC-----CCeEEEEEECCC-HHHHHHHhhCCCCCeE----ECCHHHHhcCCCCCEEEEe
Confidence 5899999999998 577777654 156665444443 44555555 45553 5789999875 8999999
Q ss_pred ecchhHHHHHHHHHhcCCCCcEE
Q 012479 186 ISDAAQADNYEKIFSCMKPNSIL 208 (462)
Q Consensus 186 vpd~a~~~vl~eI~~~Lk~gaiL 208 (462)
+|+..+.++..... +.|+.|
T Consensus 73 tp~~~h~~~~~~al---~aGk~V 92 (349)
T 3i23_A 73 TPAHTHYDLAKQAI---LAGKSV 92 (349)
T ss_dssp SCGGGHHHHHHHHH---HTTCEE
T ss_pred CCcHHHHHHHHHHH---HcCCEE
Confidence 99999988776543 355543
No 226
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=97.42 E-value=0.0006 Score=68.26 Aligned_cols=90 Identities=16% Similarity=0.133 Sum_probs=56.5
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHH--c-----C--ceecCCCcCCHhhhhccCCe
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA--A-----G--FTEENGTLGDIYETISGSDL 181 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~--~-----G--~~~~d~~~~~~~eav~~ADv 181 (462)
+||+|||.|.||.++|..|... |+ +|++.+....+....+.. . + ... ..+.+. +++++||+
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~------g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i--~~t~d~-~al~~aD~ 75 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK------NLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKV--SGSNTY-DDLAGADV 75 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCE--EEECCG-GGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEE--EECCCH-HHhCCCCE
Confidence 7999999999999999999988 87 855544433322111111 1 1 111 012456 88999999
Q ss_pred EEEee--cch-------------------hHHHHHHHHHhcCCCCcEEEEe
Q 012479 182 VLLLI--SDA-------------------AQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 182 ViLav--pd~-------------------a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
||+++ |.. ...++.++|..+. |+.+|.++
T Consensus 76 Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~ 125 (322)
T 1t2d_A 76 VIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVV 125 (322)
T ss_dssp EEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEEC
T ss_pred EEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe
Confidence 99998 421 2344555666665 67665544
No 227
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.40 E-value=0.00021 Score=71.96 Aligned_cols=86 Identities=13% Similarity=0.085 Sum_probs=57.9
Q ss_pred CEEEEEcccchHHH-HHHHHHHhhhhhcCCcEEEEEecCCch-hHHHHHHcCceecCCCcCCHhhhhccC--CeEEEeec
Q 012479 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSR-SFAEARAAGFTEENGTLGDIYETISGS--DLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~G~mG~A-iA~~Lrds~~~~g~G~~Vivg~r~~~~-s~~~A~~~G~~~~d~~~~~~~eav~~A--DvViLavp 187 (462)
.||||||+|.||.. ++.+|++. .+++++...+.+.. ..+.+++.+... ...+.++++++. |+|++++|
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~~~~~---~~~~~~~ll~~~~vD~V~i~tp 77 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQM-----QDIRIVAACDSDLERARRVHRFISDIP---VLDNVPAMLNQVPLDAVVMAGP 77 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTC-----TTEEEEEEECSSHHHHGGGGGTSCSCC---EESSHHHHHHHSCCSEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHHhC-----CCcEEEEEEcCCHHHHHHHHHhcCCCc---ccCCHHHHhcCCCCCEEEEcCC
Confidence 58999999999985 89998764 15666534444333 223333333221 157899998754 99999999
Q ss_pred chhHHHHHHHHHhcCCCCcEE
Q 012479 188 DAAQADNYEKIFSCMKPNSIL 208 (462)
Q Consensus 188 d~a~~~vl~eI~~~Lk~gaiL 208 (462)
+..+.++..+.+ +.|+-|
T Consensus 78 ~~~H~~~~~~al---~aGkhV 95 (359)
T 3m2t_A 78 PQLHFEMGLLAM---SKGVNV 95 (359)
T ss_dssp HHHHHHHHHHHH---HTTCEE
T ss_pred cHHHHHHHHHHH---HCCCeE
Confidence 999988877543 345543
No 228
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=97.40 E-value=0.00038 Score=69.95 Aligned_cols=94 Identities=16% Similarity=0.169 Sum_probs=61.8
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCC-chhHHHHHHcCceecC--------------CCcCCHhhhh
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SRSFAEARAAGFTEEN--------------GTLGDIYETI 176 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~-~~s~~~A~~~G~~~~d--------------~~~~~~~eav 176 (462)
.||||||+|.||..+++.|... .+++++...+.+ ......++.+|+..-. ....+.++++
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~-----~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~ 77 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQ-----DDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLL 77 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-----TTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHH
T ss_pred cEEEEEeEhHHHHHHHHHHhcC-----CCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhc
Confidence 5899999999999999999865 145554433333 3334555566642100 0124677888
Q ss_pred ccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 012479 177 SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 177 ~~ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~G 213 (462)
.++|+|++|+|...+.+..... ++.|+.|.+.+.
T Consensus 78 ~~vDvV~~aTp~~~h~~~a~~~---l~aGk~Vi~sap 111 (334)
T 2czc_A 78 EKVDIIVDATPGGIGAKNKPLY---EKAGVKAIFQGG 111 (334)
T ss_dssp TTCSEEEECCSTTHHHHHHHHH---HHHTCEEEECTT
T ss_pred cCCCEEEECCCccccHHHHHHH---HHcCCceEeecc
Confidence 8999999999999887766543 345665555543
No 229
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.40 E-value=0.00016 Score=70.24 Aligned_cols=77 Identities=22% Similarity=0.099 Sum_probs=54.7
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhh-ccCCeEEEe
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLL 185 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav-~~ADvViLa 185 (462)
.++| +++.|+|.|.||.+++..|.+. |.+|++.+|+.++..+.+++.+... .-...+.+++. .++|+||.+
T Consensus 116 ~l~~-k~vlViGaGg~g~a~a~~L~~~------G~~V~v~~R~~~~~~~la~~~~~~~-~~~~~~~~~~~~~~~DivVn~ 187 (271)
T 1nyt_A 116 IRPG-LRILLIGAGGASRGVLLPLLSL------DCAVTITNRTVSRAEELAKLFAHTG-SIQALSMDELEGHEFDLIINA 187 (271)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSHHHHHHHHHHTGGGS-SEEECCSGGGTTCCCSEEEEC
T ss_pred CcCC-CEEEEECCcHHHHHHHHHHHHc------CCEEEEEECCHHHHHHHHHHhhccC-CeeEecHHHhccCCCCEEEEC
Confidence 4678 9999999999999999999998 8888888877555555555543200 00022333333 589999999
Q ss_pred ecchhH
Q 012479 186 ISDAAQ 191 (462)
Q Consensus 186 vpd~a~ 191 (462)
+|....
T Consensus 188 t~~~~~ 193 (271)
T 1nyt_A 188 TSSGIS 193 (271)
T ss_dssp CSCGGG
T ss_pred CCCCCC
Confidence 997654
No 230
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.39 E-value=0.00018 Score=68.56 Aligned_cols=80 Identities=13% Similarity=0.285 Sum_probs=52.6
Q ss_pred CEEEEEcccchHHHHHHH--HHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecch
Q 012479 112 NQIGVIGWGSQGPAQAQN--LRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~--Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~ 189 (462)
++|+|||+|++|.++++. .... |++++...+.++..... ...|+.+. ...++++.+++.|+|++++|..
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~------g~~iVg~~D~dp~k~g~-~i~gv~V~--~~~dl~eli~~~D~ViIAvPs~ 156 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNN------NTKISMAFDINESKIGT-EVGGVPVY--NLDDLEQHVKDESVAILTVPAV 156 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------------CCEEEEEESCTTTTTC-EETTEEEE--EGGGHHHHCSSCCEEEECSCHH
T ss_pred CEEEEEccCHHHHHHHHHHhcccC------CcEEEEEEeCCHHHHHh-HhcCCeee--chhhHHHHHHhCCEEEEecCch
Confidence 689999999999999994 3333 67776666655442221 11343321 1456788887679999999999
Q ss_pred hHHHHHHHHHh
Q 012479 190 AQADNYEKIFS 200 (462)
Q Consensus 190 a~~~vl~eI~~ 200 (462)
.+.++.+.+..
T Consensus 157 ~~~ei~~~l~~ 167 (215)
T 2vt3_A 157 AAQSITDRLVA 167 (215)
T ss_dssp HHHHHHHHHHH
T ss_pred hHHHHHHHHHH
Confidence 88888887654
No 231
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.36 E-value=0.00051 Score=69.18 Aligned_cols=84 Identities=17% Similarity=0.225 Sum_probs=57.8
Q ss_pred CEEEEEcccchHHH-HHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHc-CceecCCCcCCHhhhhc--cCCeEEEeec
Q 012479 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETIS--GSDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~G~mG~A-iA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~-G~~~~d~~~~~~~eav~--~ADvViLavp 187 (462)
.||||||+|.||.. ++..|+.. .+++++...+.+....+ .+. +... ..+.+++++ +.|+|++++|
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~~~--~~~~~~~~----~~~~~~ll~~~~~D~V~i~tp 76 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSV-----PGLNLAFVASRDEEKVK--RDLPDVTV----IASPEAAVQHPDVDLVVIASP 76 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTS-----TTEEEEEEECSCHHHHH--HHCTTSEE----ESCHHHHHTCTTCSEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHhhC-----CCeEEEEEEcCCHHHHH--hhCCCCcE----ECCHHHHhcCCCCCEEEEeCC
Confidence 58999999999997 77777764 15566544444333222 233 4443 578999987 7899999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEE
Q 012479 188 DAAQADNYEKIFSCMKPNSILG 209 (462)
Q Consensus 188 d~a~~~vl~eI~~~Lk~gaiL~ 209 (462)
+..+.++....+ +.|+.|.
T Consensus 77 ~~~H~~~~~~al---~aGk~Vl 95 (364)
T 3e82_A 77 NATHAPLARLAL---NAGKHVV 95 (364)
T ss_dssp GGGHHHHHHHHH---HTTCEEE
T ss_pred hHHHHHHHHHHH---HCCCcEE
Confidence 999988776543 3465443
No 232
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.35 E-value=0.00062 Score=70.47 Aligned_cols=85 Identities=15% Similarity=0.184 Sum_probs=59.0
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHH-HH---HcCc---eecCCCcC----CHhhhhc--c
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAE-AR---AAGF---TEENGTLG----DIYETIS--G 178 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~-A~---~~G~---~~~d~~~~----~~~eav~--~ 178 (462)
.+|||||+|.||..++.+|+.. .+++++...+.+....+. ++ +.|+ .. .. +.+++++ +
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~-----~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~----~~~~~~~~~~ll~~~~ 91 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARR-----DDVEIVAFADPDPYMVGRAQEILKKNGKKPAKV----FGNGNDDYKNMLKDKN 91 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-----TTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEE----ECSSTTTHHHHTTCTT
T ss_pred ceEEEEecCHHHHHHHHHHHhC-----CCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCce----eccCCCCHHHHhcCCC
Confidence 5899999999999999999864 156665444444433333 32 3453 22 44 8889887 5
Q ss_pred CCeEEEeecchhHHHHHHHHHhcCCCCcEE
Q 012479 179 SDLVLLLISDAAQADNYEKIFSCMKPNSIL 208 (462)
Q Consensus 179 ADvViLavpd~a~~~vl~eI~~~Lk~gaiL 208 (462)
.|+|++++|+..+.++..+.+ +.|+.|
T Consensus 92 vD~V~i~tp~~~h~~~~~~al---~aGkhV 118 (444)
T 2ixa_A 92 IDAVFVSSPWEWHHEHGVAAM---KAGKIV 118 (444)
T ss_dssp CCEEEECCCGGGHHHHHHHHH---HTTCEE
T ss_pred CCEEEEcCCcHHHHHHHHHHH---HCCCeE
Confidence 899999999999988776543 456643
No 233
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.34 E-value=0.00048 Score=69.43 Aligned_cols=85 Identities=8% Similarity=0.012 Sum_probs=60.6
Q ss_pred CEEEEEcccchHH-HHHHHHHHhhhhhcCCcEEEEEecCC-chhHHHHHHcCceecCCCcCCHhhhhcc--CCeEEEeec
Q 012479 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVKVGLRKG-SRSFAEARAAGFTEENGTLGDIYETISG--SDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~G~mG~-AiA~~Lrds~~~~g~G~~Vivg~r~~-~~s~~~A~~~G~~~~d~~~~~~~eav~~--ADvViLavp 187 (462)
.||||||+|.+|. .++..++.. +++++...+.+ ++..+.+++.|... ...+.+|++++ .|+|++++|
T Consensus 27 irvgiiG~G~~~~~~~~~~~~~~------~~~lvav~d~~~~~a~~~a~~~~~~~---~~~~~~~ll~~~~vD~V~I~tp 97 (361)
T 3u3x_A 27 LRFAAVGLNHNHIYGQVNCLLRA------GARLAGFHEKDDALAAEFSAVYADAR---RIATAEEILEDENIGLIVSAAV 97 (361)
T ss_dssp CEEEEECCCSTTHHHHHHHHHHT------TCEEEEEECSCHHHHHHHHHHSSSCC---EESCHHHHHTCTTCCEEEECCC
T ss_pred cEEEEECcCHHHHHHHHHHhhcC------CcEEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEEeCC
Confidence 5899999999994 567777765 77765444443 44456677777431 15789999875 899999999
Q ss_pred chhHHHHHHHHHhcCCCCcEE
Q 012479 188 DAAQADNYEKIFSCMKPNSIL 208 (462)
Q Consensus 188 d~a~~~vl~eI~~~Lk~gaiL 208 (462)
+..+.++....+ +.|+-|
T Consensus 98 ~~~H~~~~~~al---~aGkhV 115 (361)
T 3u3x_A 98 SSERAELAIRAM---QHGKDV 115 (361)
T ss_dssp HHHHHHHHHHHH---HTTCEE
T ss_pred hHHHHHHHHHHH---HCCCeE
Confidence 999988776543 345543
No 234
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.34 E-value=0.00017 Score=71.99 Aligned_cols=86 Identities=12% Similarity=0.148 Sum_probs=55.7
Q ss_pred CEEEEEcccchHHH-HHHHH-HHhhhhhcCCcEEEEEecCCchhHHHHHH-cCceecCCCcCCHhhhhcc--CCeEEEee
Q 012479 112 NQIGVIGWGSQGPA-QAQNL-RDSLAEAKSDIVVKVGLRKGSRSFAEARA-AGFTEENGTLGDIYETISG--SDLVLLLI 186 (462)
Q Consensus 112 kkIgIIG~G~mG~A-iA~~L-rds~~~~g~G~~Vivg~r~~~~s~~~A~~-~G~~~~d~~~~~~~eav~~--ADvViLav 186 (462)
.||||||+|.||.. ++.++ ... .+++++...+.+....+.+.+ .|... ..+.++++++ .|+|++++
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~-----~~~~l~av~d~~~~~~~~~~~~~~~~~----~~~~~~ll~~~~~D~V~i~t 73 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRK-----DSWHVAHIFRRHAKPEEQAPIYSHIHF----TSDLDEVLNDPDVKLVVVCT 73 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCT-----TTEEEEEEECSSCCGGGGSGGGTTCEE----ESCTHHHHTCTTEEEEEECS
T ss_pred eEEEEEecCHHHHHHHHHHHHhcC-----CCeEEEEEEcCCHhHHHHHHhcCCCce----ECCHHHHhcCCCCCEEEEcC
Confidence 68999999999986 55524 332 156666334333222233333 34543 5788998876 89999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEE
Q 012479 187 SDAAQADNYEKIFSCMKPNSILG 209 (462)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~gaiL~ 209 (462)
|+..+.++..... +.|+.|.
T Consensus 74 p~~~h~~~~~~al---~aGk~Vl 93 (345)
T 3f4l_A 74 HADSHFEYAKRAL---EAGKNVL 93 (345)
T ss_dssp CGGGHHHHHHHHH---HTTCEEE
T ss_pred ChHHHHHHHHHHH---HcCCcEE
Confidence 9999988776543 4565443
No 235
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=97.27 E-value=0.0015 Score=64.97 Aligned_cols=88 Identities=15% Similarity=0.099 Sum_probs=56.0
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc--EEEEEecCCc---hhHHHHHHc--CceecCCCcCCHhhhhccCCeEEE
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGS---RSFAEARAA--GFTEENGTLGDIYETISGSDLVLL 184 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~--~Vivg~r~~~---~s~~~A~~~--G~~~~d~~~~~~~eav~~ADvViL 184 (462)
+||+|||.|+||.++|..|... |+ ++++.+.... ...+..... .+.. ..+. +++++||+||+
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~------g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~----t~d~-~~l~~aD~Vi~ 83 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK------GIADRLVLLDLSEGTKGATMDLEIFNLPNVEI----SKDL-SASAHSKVVIF 83 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECCC-----CHHHHHHHTCTTEEE----ESCG-GGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhc------CCCCEEEEEcCCcchHHHHHHHhhhcCCCeEE----eCCH-HHHCCCCEEEE
Confidence 8999999999999999999888 77 7766655432 222222211 1221 2466 78999999999
Q ss_pred eecch---------------hHHHHHHHHHhcCCCCcEEEEe
Q 012479 185 LISDA---------------AQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 185 avpd~---------------a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
+.-.. ...++++++..+. |+.+|.++
T Consensus 84 aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~ 124 (303)
T 2i6t_A 84 TVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVA 124 (303)
T ss_dssp CCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEEC
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEc
Confidence 97211 1234555666654 67765444
No 236
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.26 E-value=0.00052 Score=68.90 Aligned_cols=83 Identities=11% Similarity=0.202 Sum_probs=58.1
Q ss_pred CEEEEEcccchHHH-HHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHc-CceecCCCcCCHhhhhc--cCCeEEEeec
Q 012479 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETIS--GSDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~G~mG~A-iA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~-G~~~~d~~~~~~~eav~--~ADvViLavp 187 (462)
.||||||+|.||.. ++..|+.. .+++++...+.+.. +.+.+. +... ..+.+++++ +.|+|++++|
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~--~~~~~~~~~~~----~~~~~~ll~~~~vD~V~i~tp 74 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVL-----DEYQISKIMTSRTE--EVKRDFPDAEV----VHELEEITNDPAIELVIVTTP 74 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTC-----TTEEEEEEECSCHH--HHHHHCTTSEE----ESSTHHHHTCTTCCEEEECSC
T ss_pred ceEEEEccCHHHHHHHHHHHhhC-----CCeEEEEEEcCCHH--HHHhhCCCCce----ECCHHHHhcCCCCCEEEEcCC
Confidence 58999999999997 77777654 15666544444332 234445 4443 578899987 7899999999
Q ss_pred chhHHHHHHHHHhcCCCCcEE
Q 012479 188 DAAQADNYEKIFSCMKPNSIL 208 (462)
Q Consensus 188 d~a~~~vl~eI~~~Lk~gaiL 208 (462)
+..+.++....+ +.|+-|
T Consensus 75 ~~~H~~~~~~al---~aGkhV 92 (358)
T 3gdo_A 75 SGLHYEHTMACI---QAGKHV 92 (358)
T ss_dssp TTTHHHHHHHHH---HTTCEE
T ss_pred cHHHHHHHHHHH---HcCCeE
Confidence 999988776543 345543
No 237
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.26 E-value=0.00047 Score=68.86 Aligned_cols=84 Identities=10% Similarity=0.147 Sum_probs=56.7
Q ss_pred CEEEEEcccchHHH-HHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhcc--CCeEEEeecc
Q 012479 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISG--SDLVLLLISD 188 (462)
Q Consensus 112 kkIgIIG~G~mG~A-iA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~--ADvViLavpd 188 (462)
.||||||+|.||.. ++..|++. .+++++...+.+....+ +...+... ..+.++++++ .|+|++++|+
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~-----~~~~l~av~d~~~~~~~-~~~~~~~~----~~~~~~ll~~~~vD~V~i~tp~ 77 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGT-----PGLELAGVSSSDASKVH-ADWPAIPV----VSDPQMLFNDPSIDLIVIPTPN 77 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTS-----TTEEEEEEECSCHHHHH-TTCSSCCE----ESCHHHHHHCSSCCEEEECSCT
T ss_pred ceEEEECCCHHHHHHHHHHHhhC-----CCcEEEEEECCCHHHHH-hhCCCCce----ECCHHHHhcCCCCCEEEEeCCh
Confidence 58999999999997 88888764 14566544444333222 11123332 5789999875 8999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEE
Q 012479 189 AAQADNYEKIFSCMKPNSIL 208 (462)
Q Consensus 189 ~a~~~vl~eI~~~Lk~gaiL 208 (462)
..+.++....+ +.|+-|
T Consensus 78 ~~H~~~~~~al---~aGkhV 94 (352)
T 3kux_A 78 DTHFPLAQSAL---AAGKHV 94 (352)
T ss_dssp TTHHHHHHHHH---HTTCEE
T ss_pred HHHHHHHHHHH---HCCCcE
Confidence 99988776543 445533
No 238
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.24 E-value=0.00036 Score=68.60 Aligned_cols=67 Identities=19% Similarity=0.039 Sum_probs=54.4
Q ss_pred CCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecch
Q 012479 110 GINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (462)
Q Consensus 110 gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~ 189 (462)
| +++.|||.|-+|.+++..|.+. |.+|.|.+|..++..+.+ +.|+.. .+.+++ .++|+||.+||..
T Consensus 118 ~-k~vlvlGaGGaaraia~~L~~~------G~~v~V~nRt~~ka~~la-~~~~~~-----~~~~~l-~~~DiVInaTp~G 183 (269)
T 3phh_A 118 Y-QNALILGAGGSAKALACELKKQ------GLQVSVLNRSSRGLDFFQ-RLGCDC-----FMEPPK-SAFDLIINATSAS 183 (269)
T ss_dssp C-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCTTHHHHH-HHTCEE-----ESSCCS-SCCSEEEECCTTC
T ss_pred C-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHH-HCCCeE-----ecHHHh-ccCCEEEEcccCC
Confidence 7 9999999999999999999998 888999999877777777 677553 233343 3899999999965
Q ss_pred h
Q 012479 190 A 190 (462)
Q Consensus 190 a 190 (462)
.
T Consensus 184 m 184 (269)
T 3phh_A 184 L 184 (269)
T ss_dssp C
T ss_pred C
Confidence 3
No 239
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.23 E-value=0.00051 Score=72.28 Aligned_cols=83 Identities=7% Similarity=0.115 Sum_probs=59.2
Q ss_pred CEEEEEcc----cchHHHHHHHHHHhhhhhcCCcEEEEEec-CCchhHHHHHHcCceecCCCcCCHhhhhc--cCCeEEE
Q 012479 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLR-KGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLL 184 (462)
Q Consensus 112 kkIgIIG~----G~mG~AiA~~Lrds~~~~g~G~~Vivg~r-~~~~s~~~A~~~G~~~~d~~~~~~~eav~--~ADvViL 184 (462)
.+|||||+ |.||..++.+|+.. ..+++++...+ ..++..+.+++.|+.. .....+.+|+++ +.|+|++
T Consensus 40 irvgiIG~g~~GG~~g~~h~~~l~~~----~~~~~lvav~d~~~~~a~~~a~~~g~~~-~~~~~d~~ell~~~~vD~V~I 114 (479)
T 2nvw_A 40 IRVGFVGLTSGKSWVAKTHFLAIQQL----SSQFQIVALYNPTLKSSLQTIEQLQLKH-ATGFDSLESFAQYKDIDMIVV 114 (479)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHHHT----TTTEEEEEEECSCHHHHHHHHHHTTCTT-CEEESCHHHHHHCTTCSEEEE
T ss_pred CEEEEEcccCCCCHHHHHHHHHHHhc----CCCeEEEEEEeCCHHHHHHHHHHcCCCc-ceeeCCHHHHhcCCCCCEEEE
Confidence 68999999 99999999999863 01566553334 3344445666777630 011578999885 6899999
Q ss_pred eecchhHHHHHHHHH
Q 012479 185 LISDAAQADNYEKIF 199 (462)
Q Consensus 185 avpd~a~~~vl~eI~ 199 (462)
++|+..+.++....+
T Consensus 115 ~tp~~~H~~~~~~al 129 (479)
T 2nvw_A 115 SVKVPEHYEVVKNIL 129 (479)
T ss_dssp CSCHHHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHH
Confidence 999999988776543
No 240
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=97.23 E-value=0.0019 Score=64.14 Aligned_cols=67 Identities=15% Similarity=0.155 Sum_probs=44.0
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHH--cC-------ceecCCCcCCHhhhhccCCe
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA--AG-------FTEENGTLGDIYETISGSDL 181 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~--~G-------~~~~d~~~~~~~eav~~ADv 181 (462)
+||+|||.|.+|.+++..|... |+ +|++.+....+....+.+ .+ ... ..+.+. +++++||+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~------g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i--~~t~d~-~a~~~aD~ 73 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAK------ELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRV--TGTNNY-ADTANSDV 73 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCE--EEESCG-GGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEE--EECCCH-HHHCCCCE
Confidence 6999999999999999999888 76 755444333222221221 11 111 002455 78999999
Q ss_pred EEEeec
Q 012479 182 VLLLIS 187 (462)
Q Consensus 182 ViLavp 187 (462)
||+++.
T Consensus 74 Vi~a~g 79 (309)
T 1ur5_A 74 IVVTSG 79 (309)
T ss_dssp EEECCC
T ss_pred EEEcCC
Confidence 999983
No 241
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.22 E-value=0.0011 Score=66.23 Aligned_cols=93 Identities=18% Similarity=0.172 Sum_probs=62.4
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCc-h-hHHHHHHcCceecCCCcCCHhhhh-----ccCCeEEE
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-R-SFAEARAAGFTEENGTLGDIYETI-----SGSDLVLL 184 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~-~-s~~~A~~~G~~~~d~~~~~~~eav-----~~ADvViL 184 (462)
.||||||+|.+|..++..|.+.. .+.+++...+.+. + ..+.+++.|+... ..+.++++ ++.|+|++
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~----~~~elvav~d~~~~~~~~~~a~~~g~~~~---~~~~e~ll~~~~~~~iDvV~~ 77 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNA----KYLEMGAMVGIDAASDGLARAQRMGVTTT---YAGVEGLIKLPEFADIDFVFD 77 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC----SSEEEEEEECSCTTCHHHHHHHHTTCCEE---SSHHHHHHHSGGGGGEEEEEE
T ss_pred CEEEEEcCcHHHHHHHHHHHhhC----cCeEEEEEEeCChhhhHHHHHHHcCCCcc---cCCHHHHHhccCCCCCcEEEE
Confidence 58999999999999999995521 1555544444433 3 3567778887421 23456664 45899999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
++|+..+.++....... ++|+.|++..
T Consensus 78 atp~~~h~~~a~~al~a-~~Gk~Vi~ek 104 (312)
T 1nvm_B 78 ATSASAHVQNEALLRQA-KPGIRLIDLT 104 (312)
T ss_dssp CSCHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred CCChHHHHHHHHHHHHh-CCCCEEEEcC
Confidence 99998888777654332 3477766543
No 242
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=97.21 E-value=0.0005 Score=69.26 Aligned_cols=86 Identities=12% Similarity=0.083 Sum_probs=63.8
Q ss_pred CEEEEEc-ccchHHH-HH----HHHHHhhhhhcCC-cE----------EEEEecCCchhHHHHHHcCceecCCCcCCHhh
Q 012479 112 NQIGVIG-WGSQGPA-QA----QNLRDSLAEAKSD-IV----------VKVGLRKGSRSFAEARAAGFTEENGTLGDIYE 174 (462)
Q Consensus 112 kkIgIIG-~G~mG~A-iA----~~Lrds~~~~g~G-~~----------Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~e 174 (462)
.|||||| +|.||.. ++ ..+++. + +. +.+..+..++..+.+++.|+.. ...|.+|
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~------~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~---~~~~~~~ 77 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQ------GGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIAR---WTTDLDA 77 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHH------TSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCC---EESCHHH
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhc------CceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCc---ccCCHHH
Confidence 4799999 9999998 88 888776 3 22 1256666666677788888842 1578999
Q ss_pred hhcc--CCeEEEeecchhHHHHHHHHHhcCCCCcEEE
Q 012479 175 TISG--SDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (462)
Q Consensus 175 av~~--ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~ 209 (462)
++++ .|+|++++|+..+.++..+. |+.|+-|.
T Consensus 78 ll~~~~iD~V~i~tp~~~h~~~~~~a---l~~Gk~V~ 111 (383)
T 3oqb_A 78 ALADKNDTMFFDAATTQARPGLLTQA---INAGKHVY 111 (383)
T ss_dssp HHHCSSCCEEEECSCSSSSHHHHHHH---HTTTCEEE
T ss_pred HhcCCCCCEEEECCCchHHHHHHHHH---HHCCCeEE
Confidence 8865 89999999999998877654 34566543
No 243
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.21 E-value=0.00045 Score=71.56 Aligned_cols=82 Identities=12% Similarity=0.144 Sum_probs=58.5
Q ss_pred CEEEEEcc----cchHHHHHHHHHHhhhhhcCCcEEEEEecCC-chhHHHHHHcCceecCCCcCCHhhhhc--cCCeEEE
Q 012479 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLL 184 (462)
Q Consensus 112 kkIgIIG~----G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~-~~s~~~A~~~G~~~~d~~~~~~~eav~--~ADvViL 184 (462)
.+|||||+ |.||..++.+|++. ..+++++...+.+ ++..+.+++.|+.. .....+.+++++ +.|+|++
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~----~~~~~lvav~d~~~~~~~~~a~~~g~~~-~~~~~~~~~ll~~~~vD~V~i 95 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQL----SSQFQITALYSPKIETSIATIQRLKLSN-ATAFPTLESFASSSTIDMIVI 95 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHT----TTTEEEEEEECSSHHHHHHHHHHTTCTT-CEEESSHHHHHHCSSCSEEEE
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhc----CCCeEEEEEEeCCHHHHHHHHHHcCCCc-ceeeCCHHHHhcCCCCCEEEE
Confidence 58999999 99999999999863 0156665444443 34445566677630 001578999886 6899999
Q ss_pred eecchhHHHHHHHH
Q 012479 185 LISDAAQADNYEKI 198 (462)
Q Consensus 185 avpd~a~~~vl~eI 198 (462)
++|+..+.++....
T Consensus 96 ~tp~~~H~~~~~~a 109 (438)
T 3btv_A 96 AIQVASHYEVVMPL 109 (438)
T ss_dssp CSCHHHHHHHHHHH
T ss_pred eCCcHHHHHHHHHH
Confidence 99999998877654
No 244
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.21 E-value=0.00045 Score=69.41 Aligned_cols=83 Identities=10% Similarity=0.127 Sum_probs=57.7
Q ss_pred CEEEEEcccchHHH-HHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHc-CceecCCCcCCHhhhhcc--CCeEEEeec
Q 012479 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETISG--SDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~G~mG~A-iA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~-G~~~~d~~~~~~~eav~~--ADvViLavp 187 (462)
.||||||+|.||.. ++..|+.. .+++++...+.+... .+++. +... ..+.++++++ .|+|++++|
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~--~~~~~~~~~~----~~~~~~ll~~~~vD~V~i~tp 74 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTN-----PHFELYKIVERSKEL--SKERYPQASI----VRSFKELTEDPEIDLIVVNTP 74 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHC-----TTEEEEEEECSSCCG--GGTTCTTSEE----ESCSHHHHTCTTCCEEEECSC
T ss_pred eEEEEECCCHHHHHHHHHHHhhC-----CCeEEEEEEcCCHHH--HHHhCCCCce----ECCHHHHhcCCCCCEEEEeCC
Confidence 58999999999997 78887764 156665444443332 33444 4443 5788999876 899999999
Q ss_pred chhHHHHHHHHHhcCCCCcEE
Q 012479 188 DAAQADNYEKIFSCMKPNSIL 208 (462)
Q Consensus 188 d~a~~~vl~eI~~~Lk~gaiL 208 (462)
+..+.++....+ +.|+-|
T Consensus 75 ~~~H~~~~~~al---~aGkhV 92 (362)
T 3fhl_A 75 DNTHYEYAGMAL---EAGKNV 92 (362)
T ss_dssp GGGHHHHHHHHH---HTTCEE
T ss_pred hHHHHHHHHHHH---HCCCeE
Confidence 999988776543 345543
No 245
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=97.20 E-value=0.0016 Score=64.65 Aligned_cols=67 Identities=18% Similarity=0.160 Sum_probs=45.2
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc--EEEEEecCCchhHHHHH----H---cCc--eecCCCcCCHhhhhccCC
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEAR----A---AGF--TEENGTLGDIYETISGSD 180 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~--~Vivg~r~~~~s~~~A~----~---~G~--~~~d~~~~~~~eav~~AD 180 (462)
|||+|||.|++|.++|..|... |+ ++.+.++...+....+. . .+. ... ...+ .+++++||
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~------~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~--~t~d-~~a~~~aD 71 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLN------LDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIV--GGAD-YSLLKGSE 71 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------SCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEE--EESC-GGGGTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEE--EeCC-HHHhCCCC
Confidence 6899999999999999999988 76 77666654333211111 1 111 110 0235 78999999
Q ss_pred eEEEeec
Q 012479 181 LVLLLIS 187 (462)
Q Consensus 181 vViLavp 187 (462)
+||++..
T Consensus 72 iVViaag 78 (294)
T 1oju_A 72 IIVVTAG 78 (294)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999974
No 246
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.18 E-value=0.0015 Score=67.69 Aligned_cols=95 Identities=14% Similarity=0.180 Sum_probs=65.6
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCH---hhh-hccCCeEEEeec
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI---YET-ISGSDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~---~ea-v~~ADvViLavp 187 (462)
++|.|||+|.+|..+++.|++. |++|++.+ .+....+.+++.|+...-+...+. .++ +++||+||++++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~------g~~vvvId-~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS------GVKMVVLD-HDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAID 77 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEE-CCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred CeEEEECCCHHHHHHHHHHHHC------CCCEEEEE-CCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence 6799999999999999999999 98877655 445567777788874321112222 233 688999999999
Q ss_pred chhHHHHHHHHHhcCCCC-cEEEEecc
Q 012479 188 DAAQADNYEKIFSCMKPN-SILGLSHG 213 (462)
Q Consensus 188 d~a~~~vl~eI~~~Lk~g-aiL~~a~G 213 (462)
+......+-..+..+.|+ .+|.-+..
T Consensus 78 ~~~~n~~i~~~ar~~~p~~~Iiara~~ 104 (413)
T 3l9w_A 78 DPQTNLQLTEMVKEHFPHLQIIARARD 104 (413)
T ss_dssp SHHHHHHHHHHHHHHCTTCEEEEEESS
T ss_pred ChHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 876655444444445555 45555543
No 247
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=97.16 E-value=0.00032 Score=71.76 Aligned_cols=86 Identities=9% Similarity=0.064 Sum_probs=61.6
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEE-EEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecchh
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vi-vg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~a 190 (462)
.||+|||+| +|..++..+++.. .+++++ |..+..++..+.|++.|+.. ..|.++++++.|+|+++||+..
T Consensus 8 ~rv~VvG~G-~g~~h~~a~~~~~----~~~elvav~~~~~~~a~~~a~~~gv~~----~~~~~~l~~~~D~v~i~~p~~~ 78 (372)
T 4gmf_A 8 QRVLIVGAK-FGEMYLNAFMQPP----EGLELVGLLAQGSARSRELAHAFGIPL----YTSPEQITGMPDIACIVVRSTV 78 (372)
T ss_dssp EEEEEECST-TTHHHHHTTSSCC----TTEEEEEEECCSSHHHHHHHHHTTCCE----ESSGGGCCSCCSEEEECCC--C
T ss_pred CEEEEEehH-HHHHHHHHHHhCC----CCeEEEEEECCCHHHHHHHHHHhCCCE----ECCHHHHhcCCCEEEEECCCcc
Confidence 589999999 7998888887641 145654 34555667788899999875 6789999999999999999887
Q ss_pred H----HHHHHHHHhcCCCCcEEE
Q 012479 191 Q----ADNYEKIFSCMKPNSILG 209 (462)
Q Consensus 191 ~----~~vl~eI~~~Lk~gaiL~ 209 (462)
+ .++... .|+.|+-|.
T Consensus 79 h~~~~~~~a~~---al~aGkhVl 98 (372)
T 4gmf_A 79 AGGAGTQLARH---FLARGVHVI 98 (372)
T ss_dssp TTSHHHHHHHH---HHHTTCEEE
T ss_pred cchhHHHHHHH---HHHcCCcEE
Confidence 7 344433 345566443
No 248
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=97.14 E-value=0.0018 Score=65.08 Aligned_cols=73 Identities=19% Similarity=0.211 Sum_probs=47.0
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHH----HH---c--CceecCCCcCCHhh
Q 012479 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEA----RA---A--GFTEENGTLGDIYE 174 (462)
Q Consensus 105 ~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A----~~---~--G~~~~d~~~~~~~e 174 (462)
|..++. +||+|||.|.+|.++|..|... |+ ++++.+....+....+ .. . ..... ...+. +
T Consensus 2 ~~~m~~-~kI~viGaG~vG~~~a~~l~~~------~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~--~t~d~-~ 71 (324)
T 3gvi_A 2 PGSMAR-NKIALIGSGMIGGTLAHLAGLK------ELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFT--GANDY-A 71 (324)
T ss_dssp ----CC-CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEE--EESSG-G
T ss_pred CCCCcC-CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEE--EeCCH-H
Confidence 445666 8999999999999999999988 77 7776666544322111 11 1 11110 02344 8
Q ss_pred hhccCCeEEEeec
Q 012479 175 TISGSDLVLLLIS 187 (462)
Q Consensus 175 av~~ADvViLavp 187 (462)
++++||+||++..
T Consensus 72 a~~~aDiVIiaag 84 (324)
T 3gvi_A 72 AIEGADVVIVTAG 84 (324)
T ss_dssp GGTTCSEEEECCS
T ss_pred HHCCCCEEEEccC
Confidence 9999999999974
No 249
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.13 E-value=0.00063 Score=67.56 Aligned_cols=85 Identities=9% Similarity=0.023 Sum_probs=57.2
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCc--hh---HHHHHHcCceecCCCcCCHhhhhcc--CCeEEE
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS--RS---FAEARAAGFTEENGTLGDIYETISG--SDLVLL 184 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~--~s---~~~A~~~G~~~~d~~~~~~~eav~~--ADvViL 184 (462)
.||||||+|.+|..++..| .. +++++...+.+. +. .+.+.+.|+.. ....|.+|++++ .|+|++
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~------~~~lvav~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~~vD~V~I 73 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DE------ECSITGIAPGVPEEDLSKLEKAISEMNIKP--KKYNNWWEMLEKEKPDILVI 73 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CT------TEEEEEEECSSTTCCCHHHHHHHHTTTCCC--EECSSHHHHHHHHCCSEEEE
T ss_pred eEEEEEccchhHHHHHHhc-CC------CcEEEEEecCCchhhHHHHHHHHHHcCCCC--cccCCHHHHhcCCCCCEEEE
Confidence 6899999999999888877 44 677654444332 22 22233346521 126789998864 899999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEE
Q 012479 185 LISDAAQADNYEKIFSCMKPNSIL 208 (462)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~gaiL 208 (462)
++|+..+.++....+ +.|+-|
T Consensus 74 ~tp~~~H~~~~~~al---~aGkhV 94 (337)
T 3ip3_A 74 NTVFSLNGKILLEAL---ERKIHA 94 (337)
T ss_dssp CSSHHHHHHHHHHHH---HTTCEE
T ss_pred eCCcchHHHHHHHHH---HCCCcE
Confidence 999999988776543 345543
No 250
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=97.10 E-value=0.0014 Score=65.32 Aligned_cols=89 Identities=12% Similarity=0.193 Sum_probs=54.9
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc--EEEEEecCCchhHHHHHH--cCc------eecCCCcCCHhhhhccCCe
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AGF------TEENGTLGDIYETISGSDL 181 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~--~Vivg~r~~~~s~~~A~~--~G~------~~~d~~~~~~~eav~~ADv 181 (462)
+||+|||.|++|.+++..|... ++ ++++.+....+....+.+ .+. .. ..+..+++++||+
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~------~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i----~~~~~~a~~~aDv 77 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALR------QTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSL----YAGDYSDVKDCDV 77 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEE----C--CGGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEE----EECCHHHhCCCCE
Confidence 7899999999999999999987 66 666555443222222222 221 11 1133678999999
Q ss_pred EEEeecchh----------------HHHHHHHHHhcCCCCcEEEEe
Q 012479 182 VLLLISDAA----------------QADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 182 ViLavpd~a----------------~~~vl~eI~~~Lk~gaiL~~a 211 (462)
||++++... ..++.+.|.++ .|+.+|...
T Consensus 78 Vii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~ 122 (318)
T 1y6j_A 78 IVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVV 122 (318)
T ss_dssp EEECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEEC
T ss_pred EEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEe
Confidence 999987433 23344455555 577766554
No 251
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=97.10 E-value=0.00033 Score=66.71 Aligned_cols=147 Identities=15% Similarity=0.204 Sum_probs=85.6
Q ss_pred cccccchhhhhhhhccccccceeecCcccccccccc----c--CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEE
Q 012479 72 LDFETSVFKKDMISLADRDEYIVRGGRDLFNLLPDA----F--NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV 145 (462)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~f~~~~~~----l--~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Viv 145 (462)
..+++...||-+-.|+.- -.|+-++.-..+.+. | ...++++|||+|++|.+++..+... ..|++++.
T Consensus 42 ~gv~~~qiRkDls~fg~~---G~~g~GY~V~~L~~~i~~~Lg~~~~~~V~IvGaG~lG~aLa~~~~~~----~~g~~iVg 114 (212)
T 3keo_A 42 LGIDSATVRRDFSYFGEL---GRRGFGYDVKKLMNFFAEILNDHSTTNVMLVGCGNIGRALLHYRFHD----RNKMQISM 114 (212)
T ss_dssp HTSCHHHHHHHHHTTGGG---TTTSSSEEHHHHHHHHHHHTTTTSCEEEEEECCSHHHHHHTTCCCCT----TSSEEEEE
T ss_pred HCCCHHHHHHHHHHHhhc---CCCCCCEEHHHHHHHHHHHhCCCCCCEEEEECcCHHHHHHHHhhhcc----cCCeEEEE
Confidence 455666666666555432 233334433333222 2 1226899999999999999874311 11777776
Q ss_pred EecCCch-hHHHHHHcCceecCCCcCCHhhhhc--cCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEeccchHHHhhhc
Q 012479 146 GLRKGSR-SFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSM 222 (462)
Q Consensus 146 g~r~~~~-s~~~A~~~G~~~~d~~~~~~~eav~--~ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~G~~i~~~~~~ 222 (462)
..|.++. ....+.-.|+.+.+ ..++++.++ +.|+++||+|.....++.+.+...-- ..++-|++-
T Consensus 115 ~~D~dp~~kiG~~~i~GvpV~~--~~dL~~~v~~~~Id~vIIAvPs~~aq~v~d~lv~~GI-k~I~nFap~--------- 182 (212)
T 3keo_A 115 AFDLDSNDLVGKTTEDGIPVYG--ISTINDHLIDSDIETAILTVPSTEAQEVADILVKAGI-KGILSFSPV--------- 182 (212)
T ss_dssp EEECTTSTTTTCBCTTCCBEEE--GGGHHHHC-CCSCCEEEECSCGGGHHHHHHHHHHHTC-CEEEECSSS---------
T ss_pred EEeCCchhccCceeECCeEEeC--HHHHHHHHHHcCCCEEEEecCchhHHHHHHHHHHcCC-CEEEEcCCc---------
Confidence 6666554 33221124664311 356777776 48999999999888888887654321 236666652
Q ss_pred cccCCCCccEEeccc
Q 012479 223 GLDFPKNIGVIAVCP 237 (462)
Q Consensus 223 ~i~~p~~v~VV~v~P 237 (462)
.+..|+++.|--+..
T Consensus 183 ~l~vp~~v~v~~vdl 197 (212)
T 3keo_A 183 HLTLPKDIIVQYVDL 197 (212)
T ss_dssp CCCCCTTSEEEECCH
T ss_pred ccCCCCCcEEEEeCc
Confidence 235577776655543
No 252
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.07 E-value=0.0004 Score=68.11 Aligned_cols=82 Identities=10% Similarity=0.150 Sum_probs=55.2
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhc--cCCeEEEeecch
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISDA 189 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~--~ADvViLavpd~ 189 (462)
.||||||+|.||..++.+|.... ...+++++...+.+. .+.+.|+. ..+.+|+++ +.|+|++++|+.
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~--~~~~~~lvav~d~~~----~a~~~g~~-----~~~~~ell~~~~vD~V~i~tp~~ 76 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPR--SAAFLNLIGFVSRRE----LGSLDEVR-----QISLEDALRSQEIDVAYICSESS 76 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHH--HHTTEEEEEEECSSC----CCEETTEE-----BCCHHHHHHCSSEEEEEECSCGG
T ss_pred ceEEEEEEcHHHHHHHHHHhccc--cCCCEEEEEEECchH----HHHHcCCC-----CCCHHHHhcCCCCCEEEEeCCcH
Confidence 68999999999999999987520 001455443333221 12334554 468889886 689999999999
Q ss_pred hHHHHHHHHHhcCCCCcE
Q 012479 190 AQADNYEKIFSCMKPNSI 207 (462)
Q Consensus 190 a~~~vl~eI~~~Lk~gai 207 (462)
.+.++..... +.|+-
T Consensus 77 ~H~~~~~~al---~aGkh 91 (294)
T 1lc0_A 77 SHEDYIRQFL---QAGKH 91 (294)
T ss_dssp GHHHHHHHHH---HTTCE
T ss_pred hHHHHHHHHH---HCCCc
Confidence 9988776543 44663
No 253
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=97.07 E-value=0.0027 Score=63.70 Aligned_cols=70 Identities=17% Similarity=0.142 Sum_probs=46.6
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHH--cC-------ceecCCCcCCHhhhhc
Q 012479 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA--AG-------FTEENGTLGDIYETIS 177 (462)
Q Consensus 108 l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~--~G-------~~~~d~~~~~~~eav~ 177 (462)
++. +||+|||.|.+|.++|..|... |+ ++++.+....+....+.+ +. ... ...+..++++
T Consensus 3 m~~-~kI~iiGaG~vG~~~a~~l~~~------~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v---~~t~d~~a~~ 72 (321)
T 3p7m_A 3 MAR-KKITLVGAGNIGGTLAHLALIK------QLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKV---RGTNDYKDLE 72 (321)
T ss_dssp CCC-CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCE---EEESCGGGGT
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHhC------CCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEE---EEcCCHHHHC
Confidence 344 8999999999999999999988 66 776665554332222211 11 111 0123357999
Q ss_pred cCCeEEEeec
Q 012479 178 GSDLVLLLIS 187 (462)
Q Consensus 178 ~ADvViLavp 187 (462)
+||+||++..
T Consensus 73 ~aDvVIi~ag 82 (321)
T 3p7m_A 73 NSDVVIVTAG 82 (321)
T ss_dssp TCSEEEECCS
T ss_pred CCCEEEEcCC
Confidence 9999999964
No 254
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.03 E-value=0.00084 Score=66.19 Aligned_cols=77 Identities=19% Similarity=0.089 Sum_probs=56.3
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHHcC-----ceecCCCcCCHhhhhccCC
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAG-----FTEENGTLGDIYETISGSD 180 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~~G-----~~~~d~~~~~~~eav~~AD 180 (462)
.++| +++.|+|.|-+|.+++..|.+. |. +|++.+|..++..+.+++.+ +........+..++++++|
T Consensus 124 ~l~~-k~vlVlGaGG~g~aia~~L~~~------G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~D 196 (283)
T 3jyo_A 124 NAKL-DSVVQVGAGGVGNAVAYALVTH------GVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAAD 196 (283)
T ss_dssp TCCC-SEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSS
T ss_pred CcCC-CEEEEECCcHHHHHHHHHHHHC------CCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCC
Confidence 5788 9999999999999999999998 88 68888887655555544432 1100000236778889999
Q ss_pred eEEEeecchh
Q 012479 181 LVLLLISDAA 190 (462)
Q Consensus 181 vViLavpd~a 190 (462)
+||.+||...
T Consensus 197 iVInaTp~Gm 206 (283)
T 3jyo_A 197 GVVNATPMGM 206 (283)
T ss_dssp EEEECSSTTS
T ss_pred EEEECCCCCC
Confidence 9999999643
No 255
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=96.98 E-value=0.0011 Score=66.71 Aligned_cols=94 Identities=15% Similarity=0.173 Sum_probs=57.9
Q ss_pred cccCCC-CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCcee-cCCCcCC---HhhhhccCC
Q 012479 106 DAFNGI-NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE-ENGTLGD---IYETISGSD 180 (462)
Q Consensus 106 ~~l~gi-kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~-~d~~~~~---~~eav~~AD 180 (462)
+-++|- |||.|||+|.+|..++..|.+. .+|.++.+.. +..+.+.+..-.. .| +.+ ..++++++|
T Consensus 10 ~~~~g~~mkilvlGaG~vG~~~~~~L~~~-------~~v~~~~~~~-~~~~~~~~~~~~~~~d--~~d~~~l~~~~~~~D 79 (365)
T 3abi_A 10 HHIEGRHMKVLILGAGNIGRAIAWDLKDE-------FDVYIGDVNN-ENLEKVKEFATPLKVD--ASNFDKLVEVMKEFE 79 (365)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHTTT-------SEEEEEESCH-HHHHHHTTTSEEEECC--TTCHHHHHHHHTTCS
T ss_pred ccccCCccEEEEECCCHHHHHHHHHHhcC-------CCeEEEEcCH-HHHHHHhccCCcEEEe--cCCHHHHHHHHhCCC
Confidence 344442 5899999999999999998654 5777776653 3344443322111 01 223 456789999
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 181 vViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
+||.++|+..+..+.+... +.|.-+++.+
T Consensus 80 vVi~~~p~~~~~~v~~~~~---~~g~~yvD~s 108 (365)
T 3abi_A 80 LVIGALPGFLGFKSIKAAI---KSKVDMVDVS 108 (365)
T ss_dssp EEEECCCGGGHHHHHHHHH---HHTCEEEECC
T ss_pred EEEEecCCcccchHHHHHH---hcCcceEeee
Confidence 9999999998877776432 2344444444
No 256
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.97 E-value=0.0022 Score=64.58 Aligned_cols=70 Identities=21% Similarity=0.222 Sum_probs=44.7
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc--EEEEEecCCchhHHHH--HHcCceec--C-CCcCCHhhhhccCCeEEE
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEA--RAAGFTEE--N-GTLGDIYETISGSDLVLL 184 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~--~Vivg~r~~~~s~~~A--~~~G~~~~--d-~~~~~~~eav~~ADvViL 184 (462)
+||+|||.|.+|.++|..|... |+ ++++.+....+....+ ...++... + ....+..+++++||+||+
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~------~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi 79 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQ------GITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCI 79 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEE
Confidence 7999999999999999999988 76 6665554322222222 11221100 0 001233578999999999
Q ss_pred eec
Q 012479 185 LIS 187 (462)
Q Consensus 185 avp 187 (462)
+..
T Consensus 80 ~ag 82 (326)
T 3pqe_A 80 CAG 82 (326)
T ss_dssp CCS
T ss_pred ecc
Confidence 974
No 257
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=96.97 E-value=0.0015 Score=66.71 Aligned_cols=65 Identities=22% Similarity=0.238 Sum_probs=50.0
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhc-cCCeEEE
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLL 184 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~-~ADvViL 184 (462)
.|+| |+|+|+|+|++|...|+.|+.. |.+|++.+.. ....+.+.+.|... .+.+++.. +||+++.
T Consensus 172 ~L~G-ktV~I~G~GnVG~~~A~~l~~~------GakVvvsD~~-~~~~~~a~~~ga~~-----v~~~ell~~~~DIliP 237 (355)
T 1c1d_A 172 SLDG-LTVLVQGLGAVGGSLASLAAEA------GAQLLVADTD-TERVAHAVALGHTA-----VALEDVLSTPCDVFAP 237 (355)
T ss_dssp CSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCEE-----CCGGGGGGCCCSEEEE
T ss_pred CCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEEeCC-ccHHHHHHhcCCEE-----eChHHhhcCccceecH
Confidence 6899 9999999999999999999988 9988855443 33245566667652 35667766 8999874
No 258
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=96.97 E-value=0.00032 Score=70.74 Aligned_cols=96 Identities=13% Similarity=0.078 Sum_probs=65.8
Q ss_pred ccCCCCEEEEEcccch-HHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCC----c--CCHhhhhccC
Q 012479 107 AFNGINQIGVIGWGSQ-GPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGT----L--GDIYETISGS 179 (462)
Q Consensus 107 ~l~gikkIgIIG~G~m-G~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~----~--~~~~eav~~A 179 (462)
.++| +++.|||.|.| |..+|+.|... |..|.+.+|+..+.++.+.+.+......+ + .+.++.+++|
T Consensus 174 ~l~g-k~vvVIG~G~iVG~~~A~~L~~~------gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~A 246 (320)
T 1edz_A 174 RLYG-KKCIVINRSEIVGRPLAALLAND------GATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDS 246 (320)
T ss_dssp TTTT-CEEEEECCCTTTHHHHHHHHHTT------SCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHC
T ss_pred CCCC-CEEEEECCCcchHHHHHHHHHHC------CCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccC
Confidence 6889 99999999976 99999999988 88888887764444444333332110000 1 3578899999
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 012479 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 180 DvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~G 213 (462)
|+||.+++-... ++. ...+|+|++|+|++-
T Consensus 247 DIVIsAtg~p~~--vI~--~e~vk~GavVIDVgi 276 (320)
T 1edz_A 247 DVVITGVPSENY--KFP--TEYIKEGAVCINFAC 276 (320)
T ss_dssp SEEEECCCCTTC--CBC--TTTSCTTEEEEECSS
T ss_pred CEEEECCCCCcc--eeC--HHHcCCCeEEEEcCC
Confidence 999999985211 011 234688988888864
No 259
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=96.97 E-value=0.0024 Score=63.88 Aligned_cols=68 Identities=21% Similarity=0.168 Sum_probs=46.0
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc--EEEEEecCCchhHHHHHH-------c--CceecCCCcCCHhhhhccCC
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA-------A--GFTEENGTLGDIYETISGSD 180 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~--~Vivg~r~~~~s~~~A~~-------~--G~~~~d~~~~~~~eav~~AD 180 (462)
|||+|||.|.||.++|..|... |+ ++++.+....+....+.+ . .... ...+..+++++||
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~------~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v---~~~~~~~a~~~aD 71 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQ------DVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRV---TGTNDYGPTEDSD 71 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEE---EEESSSGGGTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEE---EECCCHHHhCCCC
Confidence 6899999999999999999988 76 666665544332222211 1 1111 0124568899999
Q ss_pred eEEEeecc
Q 012479 181 LVLLLISD 188 (462)
Q Consensus 181 vViLavpd 188 (462)
+||++.+.
T Consensus 72 vVii~ag~ 79 (314)
T 3nep_X 72 VCIITAGL 79 (314)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999753
No 260
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=96.96 E-value=0.0036 Score=62.38 Aligned_cols=70 Identities=17% Similarity=0.238 Sum_probs=43.8
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc--EEEEEecCCch-hHHHHHH--cCceec--C-CCcCCHhhhhccCCeEE
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSR-SFAEARA--AGFTEE--N-GTLGDIYETISGSDLVL 183 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~--~Vivg~r~~~~-s~~~A~~--~G~~~~--d-~~~~~~~eav~~ADvVi 183 (462)
+||+|||.|++|.+++..|... ++ +++. .+.+.. ....+.. .+.... + ....+..+++++||+||
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~------~~~~ei~L-~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVv 79 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQ------SIVDELVI-IDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVV 79 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------CSCSEEEE-ECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEE-EeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEE
Confidence 6999999999999999999887 65 5544 443332 2211221 111000 0 00124577899999999
Q ss_pred Eeecc
Q 012479 184 LLISD 188 (462)
Q Consensus 184 Lavpd 188 (462)
++++.
T Consensus 80 i~ag~ 84 (317)
T 3d0o_A 80 ICAGA 84 (317)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 99853
No 261
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.91 E-value=0.00088 Score=67.78 Aligned_cols=98 Identities=10% Similarity=0.036 Sum_probs=66.5
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCcee---cCCCcCCHhhhhccCCeEE
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE---ENGTLGDIYETISGSDLVL 183 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~---~d~~~~~~~eav~~ADvVi 183 (462)
.+++ ++|.|||.|.+|.+.++.++.. |.+|++.+++.. ..+.+.+.|... .+....+..+.++++|+||
T Consensus 164 ~l~~-~~VlViGaGgvG~~aa~~a~~~------Ga~V~v~dr~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI 235 (361)
T 1pjc_A 164 GVKP-GKVVILGGGVVGTEAAKMAVGL------GAQVQIFDINVE-RLSYLETLFGSRVELLYSNSAEIETAVAEADLLI 235 (361)
T ss_dssp TBCC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCHH-HHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEE
T ss_pred CCCC-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCHH-HHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEE
Confidence 4778 9999999999999999999988 888877776543 344454443210 0000123456778999999
Q ss_pred EeecchhH--HH-HHHHHHhcCCCCcEEEEec
Q 012479 184 LLISDAAQ--AD-NYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 184 Lavpd~a~--~~-vl~eI~~~Lk~gaiL~~a~ 212 (462)
.+++.... .. +.++..+.|++|.+|++.+
T Consensus 236 ~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 236 GAVLVPGRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp ECCCCTTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred ECCCcCCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 99975331 11 1344567789999888765
No 262
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=96.90 E-value=0.0014 Score=68.81 Aligned_cols=76 Identities=18% Similarity=0.210 Sum_probs=49.5
Q ss_pred CCCCEEEEEcccch--HHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHc---------CceecCCCcCCHhhhhc
Q 012479 109 NGINQIGVIGWGSQ--GPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA---------GFTEENGTLGDIYETIS 177 (462)
Q Consensus 109 ~gikkIgIIG~G~m--G~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~---------G~~~~d~~~~~~~eav~ 177 (462)
+. +||+|||.|+| |.+++..|...- .-.| +|++.+.. +...+..... -+.. +.|.+++++
T Consensus 4 ~~-~KIaVIGaGs~g~g~~la~~l~~~~--~~~g-eV~L~Di~-~e~le~~~~~~~~l~~~~~~I~~----TtD~~eAl~ 74 (450)
T 3fef_A 4 DQ-IKIAYIGGGSQGWARSLMSDLSIDE--RMSG-TVALYDLD-FEAAQKNEVIGNHSGNGRWRYEA----VSTLKKALS 74 (450)
T ss_dssp CC-EEEEEETTTCSSHHHHHHHHHHHCS--SCCE-EEEEECSS-HHHHHHHHHHHTTSTTSCEEEEE----ESSHHHHHT
T ss_pred CC-CEEEEECCChhHhHHHHHHHHHhcc--ccCC-eEEEEeCC-HHHHHHHHHHHHHHhccCCeEEE----ECCHHHHhc
Confidence 44 79999999998 578888887630 0015 67665544 3323222211 1222 568899999
Q ss_pred cCCeEEEeecchhHHH
Q 012479 178 GSDLVLLLISDAAQAD 193 (462)
Q Consensus 178 ~ADvViLavpd~a~~~ 193 (462)
+||+||+++++.....
T Consensus 75 dADfVI~airvG~~~~ 90 (450)
T 3fef_A 75 AADIVIISILPGSLDD 90 (450)
T ss_dssp TCSEEEECCCSSCHHH
T ss_pred CCCEEEeccccCCccc
Confidence 9999999999765543
No 263
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=96.90 E-value=0.0028 Score=62.95 Aligned_cols=89 Identities=25% Similarity=0.222 Sum_probs=54.9
Q ss_pred EEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHHc---------CceecCCCcCCHhhhhccCCeE
Q 012479 113 QIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAA---------GFTEENGTLGDIYETISGSDLV 182 (462)
Q Consensus 113 kIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~~---------G~~~~d~~~~~~~eav~~ADvV 182 (462)
||+|||.|++|.+++..|... ++ ++++.+....+....+.+. ..... .+.+. +++++||+|
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~------~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~--~t~d~-~a~~~aD~V 71 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR------GYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRIS--GSNSY-EDMRGSDIV 71 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH------TCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEE--EESCG-GGGTTCSEE
T ss_pred CEEEECcCHHHHHHHHHHHhC------CCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEE--ECCCH-HHhCCCCEE
Confidence 699999999999999999887 66 4666555433222212211 21110 02454 789999999
Q ss_pred EEeecchh----------------HHHHHHHHHhcCCCCcEEEEe
Q 012479 183 LLLISDAA----------------QADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 183 iLavpd~a----------------~~~vl~eI~~~Lk~gaiL~~a 211 (462)
|++.+... ..++.++|..+ .|+.++.+.
T Consensus 72 i~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~ 115 (308)
T 2d4a_B 72 LVTAGIGRKPGMTREQLLEANANTMADLAEKIKAY-AKDAIVVIT 115 (308)
T ss_dssp EECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEC
T ss_pred EEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEe
Confidence 99966433 33455555555 366655443
No 264
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.90 E-value=0.0018 Score=64.47 Aligned_cols=80 Identities=10% Similarity=0.122 Sum_probs=58.1
Q ss_pred CEEEEEcccchHH-HHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhcc---CCeEEEeec
Q 012479 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISG---SDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~G~mG~-AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~---ADvViLavp 187 (462)
.||||||+|.||. .++..|+.. .+++++...+.+.+ +.|+.. ..+.++++++ .|+|++++|
T Consensus 26 ~rvgiiG~G~ig~~~~~~~l~~~-----~~~~lvav~d~~~~------~~g~~~----~~~~~~ll~~~~~vD~V~i~tp 90 (330)
T 4ew6_A 26 INLAIVGVGKIVRDQHLPSIAKN-----ANFKLVATASRHGT------VEGVNS----YTTIEAMLDAEPSIDAVSLCMP 90 (330)
T ss_dssp EEEEEECCSHHHHHTHHHHHHHC-----TTEEEEEEECSSCC------CTTSEE----ESSHHHHHHHCTTCCEEEECSC
T ss_pred ceEEEEecCHHHHHHHHHHHHhC-----CCeEEEEEEeCChh------hcCCCc----cCCHHHHHhCCCCCCEEEEeCC
Confidence 5899999999998 799999875 15665544444332 246664 6789998865 899999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEE
Q 012479 188 DAAQADNYEKIFSCMKPNSILG 209 (462)
Q Consensus 188 d~a~~~vl~eI~~~Lk~gaiL~ 209 (462)
+..+.++....+ +.|+-|.
T Consensus 91 ~~~H~~~~~~al---~aGkhVl 109 (330)
T 4ew6_A 91 PQYRYEAAYKAL---VAGKHVF 109 (330)
T ss_dssp HHHHHHHHHHHH---HTTCEEE
T ss_pred cHHHHHHHHHHH---HcCCcEE
Confidence 999988776543 3455443
No 265
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=96.90 E-value=0.0029 Score=63.98 Aligned_cols=93 Identities=22% Similarity=0.181 Sum_probs=55.1
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc--EEEEEecCCchhHHHHHH--cC--ceecC--CCcCCHhhhhccCCeEE
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG--FTEEN--GTLGDIYETISGSDLVL 183 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~--~Vivg~r~~~~s~~~A~~--~G--~~~~d--~~~~~~~eav~~ADvVi 183 (462)
+||+|||.|.||.++|..|... |+ ++++.+....+....+.+ ++ +.... ....+.++ +++||+||
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~------g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVI 94 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMK------DLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVV 94 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHH------CCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEE
Confidence 8999999999999999999988 76 665555432222222211 11 10000 01235554 89999999
Q ss_pred Eeecch----------------hHHHHHHHHHhcCCCCcEEEEec
Q 012479 184 LLISDA----------------AQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 184 Lavpd~----------------a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
++.... ...++.++|..+ .|+.++...+
T Consensus 95 itaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~-~P~a~ilvvt 138 (330)
T 3ldh_A 95 ITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH-SPDCLKELHP 138 (330)
T ss_dssp ECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCceEEeCC
Confidence 985321 122344456666 6777655443
No 266
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.89 E-value=0.0006 Score=67.41 Aligned_cols=70 Identities=16% Similarity=0.153 Sum_probs=51.3
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEe
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLa 185 (462)
.++| +++.|||.|-+|.+++..|.+. |. +|.+..|+.++..+.+.+.+... ..+..+ + ++|+||.+
T Consensus 119 ~~~~-k~vlvlGaGGaaraia~~L~~~------G~~~v~v~nRt~~ka~~La~~~~~~~----~~~l~~-l-~~DivIna 185 (282)
T 3fbt_A 119 EIKN-NICVVLGSGGAARAVLQYLKDN------FAKDIYVVTRNPEKTSEIYGEFKVIS----YDELSN-L-KGDVIINC 185 (282)
T ss_dssp CCTT-SEEEEECSSTTHHHHHHHHHHT------TCSEEEEEESCHHHHHHHCTTSEEEE----HHHHTT-C-CCSEEEEC
T ss_pred CccC-CEEEEECCcHHHHHHHHHHHHc------CCCEEEEEeCCHHHHHHHHHhcCccc----HHHHHh-c-cCCEEEEC
Confidence 3678 9999999999999999999998 88 88888887555444443322221 223334 4 89999999
Q ss_pred ecch
Q 012479 186 ISDA 189 (462)
Q Consensus 186 vpd~ 189 (462)
||..
T Consensus 186 Tp~G 189 (282)
T 3fbt_A 186 TPKG 189 (282)
T ss_dssp SSTT
T ss_pred CccC
Confidence 9864
No 267
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=96.87 E-value=0.0032 Score=62.88 Aligned_cols=68 Identities=16% Similarity=0.184 Sum_probs=45.2
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc--EEEEEecCCchhHHHHHH--cC------ceecCCCcCCHhhhhccCCe
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG------FTEENGTLGDIYETISGSDL 181 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~--~Vivg~r~~~~s~~~A~~--~G------~~~~d~~~~~~~eav~~ADv 181 (462)
+||+|||.|++|.+++..|... ++ ++++.+....+....+.+ +. +.. ..+..+++++||+
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~------~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v----~~~~~~a~~~aDv 75 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ------GIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKI----YSGEYSDCKDADL 75 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEE----EECCGGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHcC------CCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEE----EECCHHHhCCCCE
Confidence 6999999999999999999887 65 565555432222222222 11 111 1245678999999
Q ss_pred EEEeecch
Q 012479 182 VLLLISDA 189 (462)
Q Consensus 182 ViLavpd~ 189 (462)
||++.+..
T Consensus 76 Vii~ag~~ 83 (318)
T 1ez4_A 76 VVITAGAP 83 (318)
T ss_dssp EEECCCC-
T ss_pred EEECCCCC
Confidence 99998643
No 268
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=96.86 E-value=0.0017 Score=64.16 Aligned_cols=74 Identities=16% Similarity=0.208 Sum_probs=59.4
Q ss_pred cCCCCEEEEEcccc-hHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEee
Q 012479 108 FNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (462)
Q Consensus 108 l~gikkIgIIG~G~-mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLav 186 (462)
++| +++.|||.|. +|..+|+.|... |..|.+..++ +.++++.+++||+||.++
T Consensus 148 l~G-k~vvVvG~s~iVG~plA~lL~~~------gAtVtv~~~~-------------------t~~L~~~~~~ADIVI~Av 201 (276)
T 3ngx_A 148 YHE-NTVTIVNRSPVVGRPLSMMLLNR------NYTVSVCHSK-------------------TKDIGSMTRSSKIVVVAV 201 (276)
T ss_dssp CCS-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSCHHHHHHHSSEEEECS
T ss_pred cCC-CEEEEEcCChHHHHHHHHHHHHC------CCeEEEEeCC-------------------cccHHHhhccCCEEEECC
Confidence 899 9999999985 899999999988 8888876532 247889999999999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 187 SDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
+-.. ++. ..++|+|++|+|++
T Consensus 202 g~p~---~I~--~~~vk~GavVIDvg 222 (276)
T 3ngx_A 202 GRPG---FLN--REMVTPGSVVIDVG 222 (276)
T ss_dssp SCTT---CBC--GGGCCTTCEEEECC
T ss_pred CCCc---ccc--HhhccCCcEEEEec
Confidence 8522 222 24579999998875
No 269
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=96.84 E-value=0.0037 Score=62.69 Aligned_cols=68 Identities=15% Similarity=0.174 Sum_probs=45.4
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc--EEEEEecCCchhHHHHHH--cCc------eecCCCcCCHhhhhccCCe
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AGF------TEENGTLGDIYETISGSDL 181 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~--~Vivg~r~~~~s~~~A~~--~G~------~~~d~~~~~~~eav~~ADv 181 (462)
+||+|||.|++|.+++..|... ++ ++++.+....+....+.+ +.. .. ..+..+++++||+
T Consensus 10 ~KI~IiGaG~vG~~la~~l~~~------~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i----~~~~~~a~~~aDv 79 (326)
T 2zqz_A 10 QKVILVGDGAVGSSYAYAMVLQ------GIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKI----YSAEYSDAKDADL 79 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEE----EECCGGGGGGCSE
T ss_pred CEEEEECCCHHHHHHHHHHHcC------CCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEE----EECCHHHhCCCCE
Confidence 7999999999999999999877 64 565554432222222222 221 11 1245678999999
Q ss_pred EEEeecch
Q 012479 182 VLLLISDA 189 (462)
Q Consensus 182 ViLavpd~ 189 (462)
||++.+..
T Consensus 80 Vii~ag~~ 87 (326)
T 2zqz_A 80 VVITAGAP 87 (326)
T ss_dssp EEECCCCC
T ss_pred EEEcCCCC
Confidence 99998643
No 270
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.78 E-value=0.0017 Score=63.59 Aligned_cols=69 Identities=16% Similarity=0.171 Sum_probs=53.9
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeec
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavp 187 (462)
.+ +++.|||.|-+|.+++..|.+. |. +|.|.+|+.++..+.+.+.+... ..+.. +.++|+||.+||
T Consensus 118 ~~-~~vlvlGaGgaarav~~~L~~~------G~~~i~v~nRt~~ka~~la~~~~~~~----~~~~~--~~~~DivInaTp 184 (271)
T 1npy_A 118 KN-AKVIVHGSGGMAKAVVAAFKNS------GFEKLKIYARNVKTGQYLAALYGYAY----INSLE--NQQADILVNVTS 184 (271)
T ss_dssp TT-SCEEEECSSTTHHHHHHHHHHT------TCCCEEEECSCHHHHHHHHHHHTCEE----ESCCT--TCCCSEEEECSS
T ss_pred CC-CEEEEECCcHHHHHHHHHHHHC------CCCEEEEEeCCHHHHHHHHHHcCCcc----chhhh--cccCCEEEECCC
Confidence 46 8999999999999999999998 87 78889888666667777666532 11222 468999999999
Q ss_pred chh
Q 012479 188 DAA 190 (462)
Q Consensus 188 d~a 190 (462)
...
T Consensus 185 ~gm 187 (271)
T 1npy_A 185 IGM 187 (271)
T ss_dssp TTC
T ss_pred CCc
Confidence 764
No 271
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.76 E-value=0.0017 Score=64.47 Aligned_cols=76 Identities=14% Similarity=0.131 Sum_probs=59.9
Q ss_pred cccCCCCEEEEEcccc-hHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEE
Q 012479 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~-mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViL 184 (462)
..++| +++.|||.|. .|..+|+.|... |..|.+..+. +.++++.+++||+||.
T Consensus 157 i~l~G-k~vvVIG~s~iVG~p~A~lL~~~------gAtVtv~hs~-------------------t~~L~~~~~~ADIVI~ 210 (285)
T 3l07_A 157 IKTEG-AYAVVVGASNVVGKPVSQLLLNA------KATVTTCHRF-------------------TTDLKSHTTKADILIV 210 (285)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSSHHHHHTTCSEEEE
T ss_pred CCCCC-CEEEEECCCchhHHHHHHHHHHC------CCeEEEEeCC-------------------chhHHHhcccCCEEEE
Confidence 46899 9999999987 699999999988 8888776432 2467889999999999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
+++-.. ++. ...+|+|++|+|++
T Consensus 211 Avg~p~---~I~--~~~vk~GavVIDvg 233 (285)
T 3l07_A 211 AVGKPN---FIT--ADMVKEGAVVIDVG 233 (285)
T ss_dssp CCCCTT---CBC--GGGSCTTCEEEECC
T ss_pred CCCCCC---CCC--HHHcCCCcEEEEec
Confidence 998422 122 24579999998876
No 272
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.75 E-value=0.0018 Score=63.70 Aligned_cols=155 Identities=14% Similarity=0.145 Sum_probs=90.7
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhH---HHHHH----cCceecCCCcCCHhhhhccCCeEE
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF---AEARA----AGFTEENGTLGDIYETISGSDLVL 183 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~---~~A~~----~G~~~~d~~~~~~~eav~~ADvVi 183 (462)
+||+|+| +|.||..+++.+.+. .+++++...+.+.... +..+- .|+.. ..+++++++++|+||
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~~-----~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v----~~dl~~ll~~~DVVI 78 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLAA-----PDATLVGALDRTGSPQLGQDAGAFLGKQTGVAL----TDDIERVCAEADYLI 78 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHC-----TTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBC----BCCHHHHHHHCSEEE
T ss_pred cEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEEecCcccccccHHHHhCCCCCcee----cCCHHHHhcCCCEEE
Confidence 7999999 999999999998865 1566655555432110 00011 13332 468889999999999
Q ss_pred EeecchhHHHHHHHHHhcCCCCc-EEEEeccchHHHhhhccccCCCCccEEecccCCCchh---------hHHhhhcCcc
Q 012479 184 LLISDAAQADNYEKIFSCMKPNS-ILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS---------VRRLYVQGKE 253 (462)
Q Consensus 184 Lavpd~a~~~vl~eI~~~Lk~ga-iL~~a~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~---------vr~lf~~G~~ 253 (462)
-+++|....+.+..... .|. +|+=+.|++-..++. .....+.+.+ ...||..--+ ..+.|.++
T Consensus 79 DfT~p~a~~~~~~~al~---~G~~vVigTTG~s~~~~~~-L~~aa~~~~v-v~a~N~s~Gv~l~~~~~~~aa~~l~~~-- 151 (272)
T 4f3y_A 79 DFTLPEGTLVHLDAALR---HDVKLVIGTTGFSEPQKAQ-LRAAGEKIAL-VFSANMSVGVNVTMKLLEFAAKQFAQG-- 151 (272)
T ss_dssp ECSCHHHHHHHHHHHHH---HTCEEEECCCCCCHHHHHH-HHHHTTTSEE-EECSCCCHHHHHHHHHHHHHHHHTSSS--
T ss_pred EcCCHHHHHHHHHHHHH---cCCCEEEECCCCCHHHHHH-HHHHhccCCE-EEECCCCHHHHHHHHHHHHHHHhcCcC--
Confidence 99999988877776543 344 444456775432211 1112234554 6778754332 11112111
Q ss_pred ccCCCceEEEeecc----C-CCHHHHHHHHHHHHHhCC
Q 012479 254 INGAGINSSFAVHQ----D-VDGRATNVALGWSVALGS 286 (462)
Q Consensus 254 ~~G~Gv~aliav~q----d-~tgea~e~a~al~~aiG~ 286 (462)
.-+- ++-.|+ | +||.++.+++.+.+..|.
T Consensus 152 ---~die-i~E~HH~~K~DaPSGTA~~la~~i~~~~~~ 185 (272)
T 4f3y_A 152 ---YDIE-IIEAHHRHKVDAPSGTALMMGETIAAATGR 185 (272)
T ss_dssp ---CEEE-EEEEECTTCCSSSCHHHHHHHHHHHHTTTC
T ss_pred ---CCEE-EEEecCCCCCCCCCHHHHHHHHHHHHHhCc
Confidence 1122 233343 2 478888888888877764
No 273
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=96.75 E-value=0.0056 Score=61.79 Aligned_cols=94 Identities=16% Similarity=0.135 Sum_probs=60.1
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecC-CchhHHHHHHcCceecCC-------------CcCCHhhhhc
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARAAGFTEENG-------------TLGDIYETIS 177 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~-~~~s~~~A~~~G~~~~d~-------------~~~~~~eav~ 177 (462)
.||||||+|.||..+++.|.+. .+++++...+. .......+...|+....+ ...+.+++.+
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~-----p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~ 76 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQ-----PDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIK 76 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-----TTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHH
T ss_pred eEEEEEecCHHHHHHHHHHHcC-----CCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhc
Confidence 5899999999999999999865 14565444433 233445566656532100 0113345556
Q ss_pred cCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 012479 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 178 ~ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~G 213 (462)
++|+|+.|+|.....+..+... +.|..+++.++
T Consensus 77 ~vDvV~~aTp~~~s~~~a~~~~---~aG~kvV~~sa 109 (340)
T 1b7g_O 77 TSDIVVDTTPNGVGAQYKPIYL---QLQRNAIFQGG 109 (340)
T ss_dssp HCSEEEECCSTTHHHHHHHHHH---HTTCEEEECTT
T ss_pred CCCEEEECCCCchhHHHHHHHH---HcCCeEEEeCC
Confidence 8999999999998887776543 35665555544
No 274
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.75 E-value=0.0017 Score=64.54 Aligned_cols=76 Identities=18% Similarity=0.132 Sum_probs=60.1
Q ss_pred cccCCCCEEEEEcccc-hHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEE
Q 012479 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~-mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViL 184 (462)
..++| +++.|||.|. .|..+|+.|... |..|.+..+. +.++++.+++||+||.
T Consensus 156 i~l~G-k~vvVvGrs~iVG~p~A~lL~~~------gAtVtv~h~~-------------------t~~L~~~~~~ADIVI~ 209 (285)
T 3p2o_A 156 IDLEG-KDAVIIGASNIVGRPMATMLLNA------GATVSVCHIK-------------------TKDLSLYTRQADLIIV 209 (285)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSCHHHHHTTCSEEEE
T ss_pred CCCCC-CEEEEECCCchHHHHHHHHHHHC------CCeEEEEeCC-------------------chhHHHHhhcCCEEEE
Confidence 56899 9999999987 699999999988 8888776532 2467889999999999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
+++-.. ++. ...+|+|++|+|++
T Consensus 210 Avg~p~---~I~--~~~vk~GavVIDVg 232 (285)
T 3p2o_A 210 AAGCVN---LLR--SDMVKEGVIVVDVG 232 (285)
T ss_dssp CSSCTT---CBC--GGGSCTTEEEEECC
T ss_pred CCCCCC---cCC--HHHcCCCeEEEEec
Confidence 998422 222 24579999998886
No 275
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=96.74 E-value=0.0035 Score=62.76 Aligned_cols=66 Identities=20% Similarity=0.168 Sum_probs=43.9
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCC-c-hhHHHHHH----c-----CceecCCCcCCHhhhhccC
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG-S-RSFAEARA----A-----GFTEENGTLGDIYETISGS 179 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~-~-~s~~~A~~----~-----G~~~~d~~~~~~~eav~~A 179 (462)
+||+|||.|.||.++|..|... |+ +|++.++.. . +....+.+ . .... ...+..+++++|
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~------g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i---~~t~d~~a~~~a 79 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQK------ELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANI---IGTSDYADTADS 79 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCE---EEESCGGGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEE---EEcCCHHHhCCC
Confidence 7999999999999999999998 88 777665542 1 11111111 0 1111 012335789999
Q ss_pred CeEEEee
Q 012479 180 DLVLLLI 186 (462)
Q Consensus 180 DvViLav 186 (462)
|+||++.
T Consensus 80 DvVIiaa 86 (315)
T 3tl2_A 80 DVVVITA 86 (315)
T ss_dssp SEEEECC
T ss_pred CEEEEeC
Confidence 9999997
No 276
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.71 E-value=0.0019 Score=64.58 Aligned_cols=76 Identities=13% Similarity=0.118 Sum_probs=59.3
Q ss_pred cccCCCCEEEEEcccc-hHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHh--hhhccCCeE
Q 012479 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY--ETISGSDLV 182 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~-mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~--eav~~ADvV 182 (462)
..++| +++.|||.|. +|..+|+.|... |..|.+..+.. .+++ +.+++||+|
T Consensus 161 i~l~G-k~vvVIG~s~iVG~p~A~lL~~~------gAtVtv~~~~T-------------------~~l~l~~~~~~ADIV 214 (300)
T 4a26_A 161 IEMAG-KRAVVLGRSNIVGAPVAALLMKE------NATVTIVHSGT-------------------STEDMIDYLRTADIV 214 (300)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTTS-------------------CHHHHHHHHHTCSEE
T ss_pred CCCCC-CEEEEECCCchHHHHHHHHHHHC------CCeEEEEeCCC-------------------CCchhhhhhccCCEE
Confidence 56899 9999999987 799999999998 88888876521 2344 789999999
Q ss_pred EEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 183 LLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 183 iLavpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
|.+++-.. ++. ...+|+|++|+|++
T Consensus 215 I~Avg~p~---~I~--~~~vk~GavVIDvg 239 (300)
T 4a26_A 215 IAAMGQPG---YVK--GEWIKEGAAVVDVG 239 (300)
T ss_dssp EECSCCTT---CBC--GGGSCTTCEEEECC
T ss_pred EECCCCCC---CCc--HHhcCCCcEEEEEe
Confidence 99999532 222 24579999998875
No 277
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=96.66 E-value=0.0059 Score=61.53 Aligned_cols=96 Identities=16% Similarity=0.202 Sum_probs=60.3
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCC-chhHHHHHHcCceec------------CC-C-cCCHhhh
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SRSFAEARAAGFTEE------------NG-T-LGDIYET 175 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~-~~s~~~A~~~G~~~~------------d~-~-~~~~~ea 175 (462)
|.||||+|+|.+|.-+++.|.+. .+++++...+.. ..+...+...|+..- .+ . ..+.++.
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~-----~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~ 75 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQ-----DDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDM 75 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTS-----SSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHH
T ss_pred CeEEEEEeECHHHHHHHHHHHcC-----CCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHH
Confidence 36899999999999999999864 155654433332 233334444432100 00 0 1245566
Q ss_pred hccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEeccc
Q 012479 176 ISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (462)
Q Consensus 176 v~~ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~G~ 214 (462)
..++|+|+.|+|.....+..+... +.|+.|++.++-
T Consensus 76 ~~~vDvV~~atp~~~~~~~a~~~l---~aG~~VId~sp~ 111 (337)
T 1cf2_P 76 LDEADIVIDCTPEGIGAKNLKMYK---EKGIKAIFQGGE 111 (337)
T ss_dssp HHTCSEEEECCSTTHHHHHHHHHH---HHTCCEEECTTS
T ss_pred hcCCCEEEECCCchhhHHHHHHHH---HcCCEEEEecCC
Confidence 779999999999998887776543 345556666654
No 278
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=96.65 E-value=0.0035 Score=62.32 Aligned_cols=67 Identities=21% Similarity=0.197 Sum_probs=44.1
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc--EEEEEecCCchhHHHHHH--cC------ceecCCCcCCHhhhhccCCe
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG------FTEENGTLGDIYETISGSDL 181 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~--~Vivg~r~~~~s~~~A~~--~G------~~~~d~~~~~~~eav~~ADv 181 (462)
+||+|||.|++|.+++..|... ++ ++++.+....+....+.+ +. ... ..+..+++++||+
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~------~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v----~~~~~~a~~~aD~ 70 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALL------GVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWV----WAGSYGDLEGARA 70 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEE----EECCGGGGTTEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEE----EECCHHHhCCCCE
Confidence 6899999999999999999887 53 565554432222222332 11 111 1134678999999
Q ss_pred EEEeecc
Q 012479 182 VLLLISD 188 (462)
Q Consensus 182 ViLavpd 188 (462)
||++.+.
T Consensus 71 Vii~ag~ 77 (310)
T 2xxj_A 71 VVLAAGV 77 (310)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9998863
No 279
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.61 E-value=0.0039 Score=65.62 Aligned_cols=97 Identities=18% Similarity=0.208 Sum_probs=60.3
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcC---CHhhhhccCCeE
Q 012479 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG---DIYETISGSDLV 182 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~---~~~eav~~ADvV 182 (462)
..+++ ++|.|||.|.+|.+++..|.+. .|.+|++..|..++..+.+...++......+. +..++++++|+|
T Consensus 19 ~~l~~-k~VlIiGAGgiG~aia~~L~~~-----~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvV 92 (467)
T 2axq_A 19 GRHMG-KNVLLLGSGFVAQPVIDTLAAN-----DDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVV 92 (467)
T ss_dssp ----C-EEEEEECCSTTHHHHHHHHHTS-----TTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEE
T ss_pred cCCCC-CEEEEECChHHHHHHHHHHHhC-----CCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEE
Confidence 45677 9999999999999999999875 04688888886554444443334321000022 344677899999
Q ss_pred EEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 012479 183 LLLISDAAQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 183 iLavpd~a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
|.++|+..+..+.... +++|..+.+.
T Consensus 93 In~tp~~~~~~v~~a~---l~~g~~vvd~ 118 (467)
T 2axq_A 93 ISLIPYTFHPNVVKSA---IRTKTDVVTS 118 (467)
T ss_dssp EECSCGGGHHHHHHHH---HHHTCEEEEC
T ss_pred EECCchhhhHHHHHHH---HhcCCEEEEe
Confidence 9999988665554432 2334444444
No 280
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.58 E-value=0.0038 Score=65.19 Aligned_cols=80 Identities=20% Similarity=0.141 Sum_probs=52.4
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcC-ceecCCCcC---CHhhhhccCCeEEE
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-FTEENGTLG---DIYETISGSDLVLL 184 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G-~~~~d~~~~---~~~eav~~ADvViL 184 (462)
++ ++|.|||.|.+|.+++..|.+. |.+|++..|..++..+.+...+ +......+. +..++++++|+||.
T Consensus 2 ~~-k~VlViGaG~iG~~ia~~L~~~------G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn 74 (450)
T 1ff9_A 2 AT-KSVLMLGSGFVTRPTLDVLTDS------GIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVIS 74 (450)
T ss_dssp CC-CEEEEECCSTTHHHHHHHHHTT------TCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHhC------cCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEE
Confidence 35 8999999999999999999988 8888887776433323332222 210000122 34467889999999
Q ss_pred eecchhHHHHH
Q 012479 185 LISDAAQADNY 195 (462)
Q Consensus 185 avpd~a~~~vl 195 (462)
++|...+..+.
T Consensus 75 ~a~~~~~~~i~ 85 (450)
T 1ff9_A 75 LIPYTFHATVI 85 (450)
T ss_dssp CCC--CHHHHH
T ss_pred CCccccchHHH
Confidence 99987665543
No 281
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=96.57 E-value=0.0094 Score=59.15 Aligned_cols=154 Identities=14% Similarity=0.056 Sum_probs=92.6
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchh---HHHHH-----HcCceecCCCcCCHhhhhccCCeE
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS---FAEAR-----AAGFTEENGTLGDIYETISGSDLV 182 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s---~~~A~-----~~G~~~~d~~~~~~~eav~~ADvV 182 (462)
.||+|+| +|.||..+++.+.+. .+++++...+..... .+..+ ..|+.. ..++++++.++|+|
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~-----~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v----~~dl~~ll~~aDVv 92 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRR-----KDVELCAVLVRKGSSFVDKDASILIGSDFLGVRI----TDDPESAFSNTEGI 92 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTC-----SSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBC----BSCHHHHTTSCSEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEecCCccccccchHHhhccCcCCcee----eCCHHHHhcCCCEE
Confidence 6899999 999999999998864 166766555543211 01111 134443 56889999999999
Q ss_pred EEeecchhHHHHHHHHHhcCCCCc-EEEEeccchHHHhhhccccCCCCccEEecccCCCchhh---------HHhhhcCc
Q 012479 183 LLLISDAAQADNYEKIFSCMKPNS-ILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSV---------RRLYVQGK 252 (462)
Q Consensus 183 iLavpd~a~~~vl~eI~~~Lk~ga-iL~~a~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~v---------r~lf~~G~ 252 (462)
|-.++|....+.+..... .|. +|+=+.|++-...+. ....-+.+.+ ...||..--+. .+.|.
T Consensus 93 IDFT~p~a~~~~~~~~l~---~Gv~vViGTTG~~~e~~~~-L~~aa~~~~~-~~a~N~SiGv~ll~~l~~~aa~~l~--- 164 (288)
T 3ijp_A 93 LDFSQPQASVLYANYAAQ---KSLIHIIGTTGFSKTEEAQ-IADFAKYTTI-VKSGNMSLGVNLLANLVKRAAKALD--- 164 (288)
T ss_dssp EECSCHHHHHHHHHHHHH---HTCEEEECCCCCCHHHHHH-HHHHHTTSEE-EECSCCCHHHHHHHHHHHHHHHHSC---
T ss_pred EEcCCHHHHHHHHHHHHH---cCCCEEEECCCCCHHHHHH-HHHHhCcCCE-EEECCCcHHHHHHHHHHHHHHHhcC---
Confidence 999999887776665443 344 444456775322211 0111234554 67888543331 11121
Q ss_pred cccCCCceE-EEeecc----C-CCHHHHHHHHHHHHHhCC
Q 012479 253 EINGAGINS-SFAVHQ----D-VDGRATNVALGWSVALGS 286 (462)
Q Consensus 253 ~~~G~Gv~a-liav~q----d-~tgea~e~a~al~~aiG~ 286 (462)
.+... ++-.|. | +||.++.+++.+.++.|.
T Consensus 165 ----~~~dieIiE~HH~~K~DaPSGTA~~la~~i~~~~~~ 200 (288)
T 3ijp_A 165 ----DDFDIEIYEMHHANKVDSPSGTALLLGQAAAEGRNI 200 (288)
T ss_dssp ----TTSEEEEEEEECTTCCCSSCHHHHHHHHHHHHHTTS
T ss_pred ----CCCCEEEEEccCCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 12222 233343 2 779999999999988875
No 282
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.56 E-value=0.0054 Score=61.70 Aligned_cols=98 Identities=15% Similarity=0.197 Sum_probs=57.2
Q ss_pred CCEEEEEcccchHHHHHHHHHHh---hhhhcCCcEEEEEecCCchh-----HH--HHHHc--CceecCCCcCCHhhhhc-
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDS---LAEAKSDIVVKVGLRKGSRS-----FA--EARAA--GFTEENGTLGDIYETIS- 177 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds---~~~~g~G~~Vivg~r~~~~s-----~~--~A~~~--G~~~~d~~~~~~~eav~- 177 (462)
|.||+|||+|.+|..+++.|.+. +...|.+++++...+.+... .. .+... +... + ..+.+++++
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~-~--~~d~~~ll~~ 78 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLR-D--DAKAIEVVRS 78 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCS-B--CCCHHHHHHH
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCcccc-C--CCCHHHHhcC
Confidence 57999999999999999999764 11222356654433332111 11 11111 2110 0 137888875
Q ss_pred -cCCeEEEeecchhH-HHHHHHHHhcCCCCcEEEEe
Q 012479 178 -GSDLVLLLISDAAQ-ADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 178 -~ADvViLavpd~a~-~~vl~eI~~~Lk~gaiL~~a 211 (462)
+.|+|+.++|+..+ .+.++-+...|+.|+.|+..
T Consensus 79 ~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~ 114 (327)
T 3do5_A 79 ADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTS 114 (327)
T ss_dssp SCCSEEEECCCCC----CHHHHHHHHHTTTCEEEEC
T ss_pred CCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEec
Confidence 58999999999876 22333345567788876544
No 283
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.55 E-value=0.0043 Score=62.19 Aligned_cols=78 Identities=12% Similarity=0.069 Sum_probs=54.0
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecC---CchhHHHHHHc----CceecCCCcCC---Hhh
Q 012479 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRK---GSRSFAEARAA----GFTEENGTLGD---IYE 174 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~---~~~s~~~A~~~----G~~~~d~~~~~---~~e 174 (462)
..++| +++.|+|.|-+|.+++..|.+. |. +|++..|. .++..+.+.+. |....-....+ ..+
T Consensus 150 ~~l~g-k~~lVlGaGG~g~aia~~L~~~------Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~ 222 (315)
T 3tnl_A 150 HDIIG-KKMTICGAGGAATAICIQAALD------GVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRK 222 (315)
T ss_dssp CCCTT-SEEEEECCSHHHHHHHHHHHHT------TCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH
T ss_pred CCccC-CEEEEECCChHHHHHHHHHHHC------CCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHh
Confidence 34788 9999999999999999999998 98 88888887 34444444332 21110000222 345
Q ss_pred hhccCCeEEEeecchh
Q 012479 175 TISGSDLVLLLISDAA 190 (462)
Q Consensus 175 av~~ADvViLavpd~a 190 (462)
.++++|+||.+||...
T Consensus 223 ~l~~aDiIINaTp~Gm 238 (315)
T 3tnl_A 223 EIAESVIFTNATGVGM 238 (315)
T ss_dssp HHHTCSEEEECSSTTS
T ss_pred hhcCCCEEEECccCCC
Confidence 6789999999999654
No 284
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.54 E-value=0.0036 Score=62.71 Aligned_cols=77 Identities=18% Similarity=0.164 Sum_probs=54.1
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecC---CchhHHHHHHc----CceecCCCcCCH---hhh
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRK---GSRSFAEARAA----GFTEENGTLGDI---YET 175 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~---~~~s~~~A~~~----G~~~~d~~~~~~---~ea 175 (462)
.++| +++.|+|.|-+|.+++..|.+. |. +|.|..|. .++..+.+++. +....-....+. .+.
T Consensus 145 ~l~g-k~~lVlGAGGaaraia~~L~~~------G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~ 217 (312)
T 3t4e_A 145 DMRG-KTMVLLGAGGAATAIGAQAAIE------GIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEA 217 (312)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHH
T ss_pred CcCC-CEEEEECcCHHHHHHHHHHHHc------CCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhh
Confidence 4678 9999999999999999999998 88 78888887 44444444332 221000002233 556
Q ss_pred hccCCeEEEeecchh
Q 012479 176 ISGSDLVLLLISDAA 190 (462)
Q Consensus 176 v~~ADvViLavpd~a 190 (462)
++++|+||.+||...
T Consensus 218 l~~~DiIINaTp~Gm 232 (312)
T 3t4e_A 218 LASADILTNGTKVGM 232 (312)
T ss_dssp HHHCSEEEECSSTTS
T ss_pred ccCceEEEECCcCCC
Confidence 789999999999754
No 285
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=96.54 E-value=0.013 Score=59.29 Aligned_cols=92 Identities=21% Similarity=0.142 Sum_probs=58.5
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchh-HHHHH--------------------HcCceecCCCcC
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS-FAEAR--------------------AAGFTEENGTLG 170 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s-~~~A~--------------------~~G~~~~d~~~~ 170 (462)
.||||+|+|.+|..+++.|..+ .+++++...+..... ...++ ..++.. ..
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~-----~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v----~~ 73 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQ-----DDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPV----EG 73 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHS-----SSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCC----CC
T ss_pred eEEEEECCCHHHHHHHHHHHhC-----CCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEE----CC
Confidence 5899999999999999998765 145654333322211 11112 222322 12
Q ss_pred CHhhhhccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEeccc
Q 012479 171 DIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (462)
Q Consensus 171 ~~~eav~~ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~G~ 214 (462)
+..+...++|+|+.|+|.....+..+ ..+++.|+.|+++++.
T Consensus 74 ~~~~~~~~vDiV~eatg~~~s~~~a~--~~~l~aG~~VI~sap~ 115 (343)
T 2yyy_A 74 TILDIIEDADIVVDGAPKKIGKQNLE--NIYKPHKVKAILQGGE 115 (343)
T ss_dssp BGGGTGGGCSEEEECCCTTHHHHHHH--HTTTTTTCEEEECTTS
T ss_pred chHHhccCCCEEEECCCccccHHHHH--HHHHHCCCEEEECCCc
Confidence 34455578999999999877665554 4678889877776653
No 286
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.50 E-value=0.0045 Score=61.49 Aligned_cols=76 Identities=21% Similarity=0.171 Sum_probs=59.7
Q ss_pred cccCCCCEEEEEcccc-hHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEE
Q 012479 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~-mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViL 184 (462)
..++| +++.|||.|. .|..+|.-|... |..|.+..+. +.++++.+++||+||.
T Consensus 157 i~l~G-k~vvVvGrs~iVG~plA~lL~~~------gAtVtv~hs~-------------------T~~L~~~~~~ADIVI~ 210 (286)
T 4a5o_A 157 ADLYG-MDAVVVGASNIVGRPMALELLLG------GCTVTVTHRF-------------------TRDLADHVSRADLVVV 210 (286)
T ss_dssp CCCTT-CEEEEECTTSTTHHHHHHHHHHT------TCEEEEECTT-------------------CSCHHHHHHTCSEEEE
T ss_pred CCCCC-CEEEEECCCchhHHHHHHHHHHC------CCeEEEEeCC-------------------CcCHHHHhccCCEEEE
Confidence 46899 9999999886 799999999988 8888776431 2367788999999999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
+++-.. ++. ...+|+|++|+|++
T Consensus 211 Avg~p~---~I~--~~~vk~GavVIDvg 233 (286)
T 4a5o_A 211 AAGKPG---LVK--GEWIKEGAIVIDVG 233 (286)
T ss_dssp CCCCTT---CBC--GGGSCTTCEEEECC
T ss_pred CCCCCC---CCC--HHHcCCCeEEEEec
Confidence 998422 222 24579999998886
No 287
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.49 E-value=0.0038 Score=64.12 Aligned_cols=94 Identities=13% Similarity=0.120 Sum_probs=61.0
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCC---cEEEEEecCCchhHHHHHHcC------ce--ecCCC-cCCHhhhhcc
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSD---IVVKVGLRKGSRSFAEARAAG------FT--EENGT-LGDIYETISG 178 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G---~~Vivg~r~~~~s~~~A~~~G------~~--~~d~~-~~~~~eav~~ 178 (462)
|+||+|||.|.+|.++++.|.+. | .+|++..|+.++..+.+.+.+ +. ..|-. ..+.++++++
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~------g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~ 74 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMN------REVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINE 74 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTC------TTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHh
Confidence 57999999999999999999987 6 278777776555444444321 21 10100 1234566777
Q ss_pred --CCeEEEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 012479 179 --SDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 179 --ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~G 213 (462)
+|+||.++|+.....+.+... +.|..+.+.++
T Consensus 75 ~~~DvVin~ag~~~~~~v~~a~l---~~g~~vvD~a~ 108 (405)
T 4ina_A 75 VKPQIVLNIALPYQDLTIMEACL---RTGVPYLDTAN 108 (405)
T ss_dssp HCCSEEEECSCGGGHHHHHHHHH---HHTCCEEESSC
T ss_pred hCCCEEEECCCcccChHHHHHHH---HhCCCEEEecC
Confidence 899999999987766666432 23444555544
No 288
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=96.46 E-value=0.0043 Score=65.00 Aligned_cols=88 Identities=15% Similarity=0.158 Sum_probs=65.0
Q ss_pred CEEEEEccc----chHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeec
Q 012479 112 NQIGVIGWG----SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~G----~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavp 187 (462)
++|+|||.+ ..|..+.++|++. |-..++...+.... -.|... ..++.|+.+..|++++++|
T Consensus 9 ~siAVvGas~~~~~~g~~v~~~l~~~------g~~~v~pVnP~~~~-----i~G~~~----y~sl~~lp~~~Dlavi~vp 73 (457)
T 2csu_A 9 KGIAVIGASNDPKKLGYEVFKNLKEY------KKGKVYPVNIKEEE-----VQGVKA----YKSVKDIPDEIDLAIIVVP 73 (457)
T ss_dssp SEEEEETCCSCTTSHHHHHHHHHTTC------CSSEEEEECSSCSE-----ETTEEC----BSSTTSCSSCCSEEEECSC
T ss_pred CeEEEECcCCCCCchHHHHHHHHHHc------CCCEEEEECCCCCe-----ECCEec----cCCHHHcCCCCCEEEEecC
Confidence 899999998 7899999999877 52233444433221 147664 5678888778999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEeccch
Q 012479 188 DAAQADNYEKIFSCMKPNSILGLSHGFL 215 (462)
Q Consensus 188 d~a~~~vl~eI~~~Lk~gaiL~~a~G~~ 215 (462)
+..+.++++++... .-..+|.++.||.
T Consensus 74 ~~~~~~~v~e~~~~-Gi~~vv~~s~G~~ 100 (457)
T 2csu_A 74 KRFVKDTLIQCGEK-GVKGVVIITAGFG 100 (457)
T ss_dssp HHHHHHHHHHHHHH-TCCEEEECCCSST
T ss_pred HHHHHHHHHHHHHc-CCCEEEEecCCCC
Confidence 99999999986543 2344778888883
No 289
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=96.42 E-value=0.0082 Score=60.56 Aligned_cols=71 Identities=23% Similarity=0.236 Sum_probs=44.8
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc--EEEEEecCCchhHHHHHH--cC--ceecCC--CcCCHhhhhccC
Q 012479 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG--FTEENG--TLGDIYETISGS 179 (462)
Q Consensus 108 l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~--~Vivg~r~~~~s~~~A~~--~G--~~~~d~--~~~~~~eav~~A 179 (462)
... +||+|||.|.||.++|..|... |+ ++++.+....+....+.+ +. +..... ...+. +++++|
T Consensus 17 ~~~-~kV~ViGaG~vG~~~a~~l~~~------~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~-~~~~~a 88 (331)
T 4aj2_A 17 VPQ-NKITVVGVGAVGMACAISILMK------DLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDY-SVTANS 88 (331)
T ss_dssp CCS-SEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSG-GGGTTE
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHhC------CCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCH-HHhCCC
Confidence 344 8999999999999999999887 76 666655443322222221 11 110000 02344 469999
Q ss_pred CeEEEee
Q 012479 180 DLVLLLI 186 (462)
Q Consensus 180 DvViLav 186 (462)
|+||++.
T Consensus 89 DiVvi~a 95 (331)
T 4aj2_A 89 KLVIITA 95 (331)
T ss_dssp EEEEECC
T ss_pred CEEEEcc
Confidence 9999986
No 290
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=96.40 E-value=0.005 Score=62.02 Aligned_cols=66 Identities=15% Similarity=0.153 Sum_probs=44.7
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc--EEEEEecCCchhHHHHHH--cC------ceecCCCcCCHhhhhccCCe
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG------FTEENGTLGDIYETISGSDL 181 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~--~Vivg~r~~~~s~~~A~~--~G------~~~~d~~~~~~~eav~~ADv 181 (462)
+||+|||.|.+|.++|..|... |+ ++++.+....+....+.+ +. ... ..+..+++++||+
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~------~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i----~~~~~~a~~~aDi 79 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQ------GIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKI----YSAEYSDAKDADL 79 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEE----EECCGGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEE----EECcHHHhcCCCE
Confidence 8999999999999999999988 76 665555432222222211 11 111 2344678999999
Q ss_pred EEEeec
Q 012479 182 VLLLIS 187 (462)
Q Consensus 182 ViLavp 187 (462)
||++..
T Consensus 80 Vvi~ag 85 (326)
T 3vku_A 80 VVITAG 85 (326)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 999865
No 291
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.36 E-value=0.0011 Score=62.80 Aligned_cols=81 Identities=12% Similarity=0.144 Sum_probs=54.2
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhc-cCCeEEEeecchh
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLLISDAA 190 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~-~ADvViLavpd~a 190 (462)
++|+|||+|++|.++++.+... . |++++...+.++..... ...|+.+. ...++++.++ +.|+|++|+|...
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~----~-g~~iVg~~D~dp~k~g~-~i~gv~V~--~~~dl~ell~~~ID~ViIA~Ps~~ 152 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFG----E-SFELRGFFDVDPEKVGR-PVRGGVIE--HVDLLPQRVPGRIEIALLTVPREA 152 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCC----S-SEEEEEEEESCTTTTTC-EETTEEEE--EGGGHHHHSTTTCCEEEECSCHHH
T ss_pred CEEEEECccHHHHHHHHhHhhc----C-CcEEEEEEeCCHHHHhh-hhcCCeee--cHHhHHHHHHcCCCEEEEeCCchh
Confidence 6899999999999999864322 2 66766666654432211 11243321 1456777776 5899999999998
Q ss_pred HHHHHHHHHh
Q 012479 191 QADNYEKIFS 200 (462)
Q Consensus 191 ~~~vl~eI~~ 200 (462)
+.++.+.+..
T Consensus 153 ~~ei~~~l~~ 162 (211)
T 2dt5_A 153 AQKAADLLVA 162 (211)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888777644
No 292
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=96.32 E-value=0.014 Score=58.07 Aligned_cols=68 Identities=18% Similarity=0.174 Sum_probs=44.4
Q ss_pred CEEEEEcc-cchHHHHHHHHHHhhhhhcCC--cEEEEEecCCchhHHHHHH--cCcee--cCCC--cCCHhhhhccCCeE
Q 012479 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSD--IVVKVGLRKGSRSFAEARA--AGFTE--ENGT--LGDIYETISGSDLV 182 (462)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lrds~~~~g~G--~~Vivg~r~~~~s~~~A~~--~G~~~--~d~~--~~~~~eav~~ADvV 182 (462)
+||+|||. |.+|.+++..|... | .++++.+... ....+.+ .+... .... ..+.++++++||+|
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~------~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvV 72 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNS------PLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVV 72 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTC------TTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEE
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEE
Confidence 58999998 99999999999877 6 3665555543 2223322 22110 0000 13577899999999
Q ss_pred EEeec
Q 012479 183 LLLIS 187 (462)
Q Consensus 183 iLavp 187 (462)
|++..
T Consensus 73 vi~ag 77 (314)
T 1mld_A 73 VIPAG 77 (314)
T ss_dssp EECCS
T ss_pred EECCC
Confidence 99874
No 293
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.31 E-value=0.0025 Score=62.17 Aligned_cols=73 Identities=15% Similarity=0.173 Sum_probs=51.9
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCc--------eecCCCcCCHhhhhcc
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF--------TEENGTLGDIYETISG 178 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~--------~~~d~~~~~~~eav~~ 178 (462)
.++| +++.|+|.|-+|.+++..|.+. | +|++..|+.++..+.+++.+. .. + +.+..+.+.+
T Consensus 125 ~l~~-k~vlV~GaGgiG~aia~~L~~~------G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~-d--~~~~~~~~~~ 193 (287)
T 1nvt_A 125 RVKD-KNIVIYGAGGAARAVAFELAKD------N-NIIIANRTVEKAEALAKEIAEKLNKKFGEEV-K--FSGLDVDLDG 193 (287)
T ss_dssp CCCS-CEEEEECCSHHHHHHHHHHTSS------S-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHE-E--EECTTCCCTT
T ss_pred CcCC-CEEEEECchHHHHHHHHHHHHC------C-CEEEEECCHHHHHHHHHHHhhhcccccceeE-E--EeeHHHhhCC
Confidence 4678 9999999999999999999998 9 998888765443344433211 10 0 2233566778
Q ss_pred CCeEEEeecchh
Q 012479 179 SDLVLLLISDAA 190 (462)
Q Consensus 179 ADvViLavpd~a 190 (462)
+|+||.++|...
T Consensus 194 ~DilVn~ag~~~ 205 (287)
T 1nvt_A 194 VDIIINATPIGM 205 (287)
T ss_dssp CCEEEECSCTTC
T ss_pred CCEEEECCCCCC
Confidence 999999998654
No 294
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.31 E-value=0.0059 Score=60.70 Aligned_cols=76 Identities=16% Similarity=0.102 Sum_probs=59.6
Q ss_pred cccCCCCEEEEEcccc-hHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEE
Q 012479 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~-mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViL 184 (462)
..++| +++.|||.|. .|..+|+-|... |..|.+..+. ..++.+.+++||+||.
T Consensus 155 i~l~g-k~vvVIG~s~iVG~p~A~lL~~~------gAtVtv~hs~-------------------t~~L~~~~~~ADIVI~ 208 (288)
T 1b0a_A 155 IDTFG-LNAVVIGASNIVGRPMSMELLLA------GCTTTVTHRF-------------------TKNLRHHVENADLLIV 208 (288)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHTT------TCEEEEECSS-------------------CSCHHHHHHHCSEEEE
T ss_pred CCCCC-CEEEEECCChHHHHHHHHHHHHC------CCeEEEEeCC-------------------chhHHHHhccCCEEEE
Confidence 46889 9999999997 599999999988 8888776422 2467889999999999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
+++... ++. ...+|+|++|+|++
T Consensus 209 Avg~p~---lI~--~~~vk~GavVIDVg 231 (288)
T 1b0a_A 209 AVGKPG---FIP--GDWIKEGAIVIDVG 231 (288)
T ss_dssp CSCCTT---CBC--TTTSCTTCEEEECC
T ss_pred CCCCcC---cCC--HHHcCCCcEEEEcc
Confidence 999443 122 23469999998886
No 295
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.31 E-value=0.011 Score=56.88 Aligned_cols=87 Identities=18% Similarity=0.203 Sum_probs=56.9
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCC-------------------chhHHHHHHc----
Q 012479 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG-------------------SRSFAEARAA---- 160 (462)
Q Consensus 105 ~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~-------------------~~s~~~A~~~---- 160 (462)
...|++ ++|.|||+|.+|..++++|... |+ ++.+.++.. .+....++..
T Consensus 26 q~~l~~-~~VlVvG~Gg~G~~va~~La~~------Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n 98 (249)
T 1jw9_B 26 QEALKD-SRVLIVGLGGLGCAASQYLASA------GVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRIN 98 (249)
T ss_dssp HHHHHH-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC
T ss_pred HHHHhC-CeEEEEeeCHHHHHHHHHHHHc------CCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHC
Confidence 366888 9999999999999999999998 87 666665543 3333222221
Q ss_pred -Ccee--cCCCcC--CHhhhhccCCeEEEeecchhHHHHHHHH
Q 012479 161 -GFTE--ENGTLG--DIYETISGSDLVLLLISDAAQADNYEKI 198 (462)
Q Consensus 161 -G~~~--~d~~~~--~~~eav~~ADvViLavpd~a~~~vl~eI 198 (462)
++.. ...... +..+.++++|+||.++++......+.+.
T Consensus 99 p~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~ 141 (249)
T 1jw9_B 99 PHIAITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAG 141 (249)
T ss_dssp TTSEEEEECSCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHH
T ss_pred CCcEEEEEeccCCHhHHHHHHhCCCEEEEeCCCHHHHHHHHHH
Confidence 2211 011111 2346788999999999876655555543
No 296
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.23 E-value=0.0089 Score=59.74 Aligned_cols=77 Identities=16% Similarity=0.157 Sum_probs=60.4
Q ss_pred cccCCCCEEEEEcccc-hHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEE
Q 012479 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~-mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViL 184 (462)
..++| +++.|||.|+ .|..+|+-|... |-.|.+..+. ..++.+.+++||+||.
T Consensus 161 i~l~g-k~vvVIG~s~iVG~p~A~lL~~~------gAtVtv~hs~-------------------t~~L~~~~~~ADIVI~ 214 (301)
T 1a4i_A 161 VPIAG-RHAVVVGRSKIVGAPMHDLLLWN------NATVTTCHSK-------------------TAHLDEEVNKGDILVV 214 (301)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSSHHHHHTTCSEEEE
T ss_pred CCCCC-CEEEEECCCchHHHHHHHHHHhC------CCeEEEEECC-------------------cccHHHHhccCCEEEE
Confidence 46889 9999999996 699999999988 8888776421 2478899999999999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEEEEecc
Q 012479 185 LISDAAQADNYEKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~gaiL~~a~G 213 (462)
+++.... +. ...+|+|++|+|++-
T Consensus 215 Avg~p~~---I~--~~~vk~GavVIDVgi 238 (301)
T 1a4i_A 215 ATGQPEM---VK--GEWIKPGAIVIDCGI 238 (301)
T ss_dssp CCCCTTC---BC--GGGSCTTCEEEECCC
T ss_pred CCCCccc---CC--HHHcCCCcEEEEccC
Confidence 9996332 21 234789999998863
No 297
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=96.22 E-value=0.0079 Score=58.88 Aligned_cols=155 Identities=15% Similarity=0.112 Sum_probs=88.0
Q ss_pred CEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhH---HHHHHc-----CceecCCCcCCHhhhhccCCeE
Q 012479 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF---AEARAA-----GFTEENGTLGDIYETISGSDLV 182 (462)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~---~~A~~~-----G~~~~d~~~~~~~eav~~ADvV 182 (462)
+||+|+|+ |.||..+++.+... .+++++...+.+.... +..+.. |+.. ..+.+++++++|+|
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~-----~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~----~~dl~~~l~~~DvV 76 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALAL-----EGVQLGAALEREGSSLLGSDAGELAGAGKTGVTV----QSSLDAVKDDFDVF 76 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHS-----TTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCE----ESCSTTTTTSCSEE
T ss_pred cEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEecCchhhhhhhHHHHcCCCcCCcee----cCCHHHHhcCCCEE
Confidence 68999999 99999999988754 1666654444432110 111111 2222 34677888899999
Q ss_pred EEeecchhHHHHHHHHHhcCCCCcE-EEEeccchHHHhhhccccCCCCccEEecccCCCchh-h--------HHhhhcCc
Q 012479 183 LLLISDAAQADNYEKIFSCMKPNSI-LGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS-V--------RRLYVQGK 252 (462)
Q Consensus 183 iLavpd~a~~~vl~eI~~~Lk~gai-L~~a~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~-v--------r~lf~~G~ 252 (462)
|-.++|....+++..... .|.- |+=..|++....+. .....+.+. +...||..-.. + .+.|.++
T Consensus 77 IDft~p~~~~~~~~~a~~---~G~~vVigTtG~~~e~~~~-L~~~a~~~~-vv~a~N~siGvn~~~~l~~~aa~~~~~~- 150 (273)
T 1dih_A 77 IDFTRPEGTLNHLAFCRQ---HGKGMVIGTTGFDEAGKQA-IRDAAADIA-IVFAANFSVGVNVMLKLLEKAAKVMGDY- 150 (273)
T ss_dssp EECSCHHHHHHHHHHHHH---TTCEEEECCCCCCHHHHHH-HHHHTTTSC-EEECSCCCHHHHHHHHHHHHHHHHHTTT-
T ss_pred EEcCChHHHHHHHHHHHh---CCCCEEEECCCCCHHHHHH-HHHhcCCCC-EEEEecCcHHHHHHHHHHHHHHHhcCCC-
Confidence 978888877776665443 4443 33355776432221 111123444 45577743322 1 1112111
Q ss_pred cccCCCceEEEeecc----C-CCHHHHHHHHHHHHHhCC
Q 012479 253 EINGAGINSSFAVHQ----D-VDGRATNVALGWSVALGS 286 (462)
Q Consensus 253 ~~~G~Gv~aliav~q----d-~tgea~e~a~al~~aiG~ 286 (462)
.-+-. +-.|+ | ++|.++.+++.+....|.
T Consensus 151 ----~diei-iE~Hh~~K~DaPSGTA~~~ae~i~~~~~~ 184 (273)
T 1dih_A 151 ----TDIEI-IEAHHRHKVDAPSGTALAMGEAIAHALDK 184 (273)
T ss_dssp ----SEEEE-EEEECTTCCSSSCHHHHHHHHHHHHHTTC
T ss_pred ----CCEEE-EEeecCCCCCCCCHHHHHHHHHHHHhhCC
Confidence 11222 33333 3 689999999999988875
No 298
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.18 E-value=0.013 Score=61.49 Aligned_cols=86 Identities=20% Similarity=0.180 Sum_probs=55.8
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCc-hhHHHHHHc-C----------------------ceecCC
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAA-G----------------------FTEENG 167 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~-~s~~~A~~~-G----------------------~~~~d~ 167 (462)
.||||||+|.||..++..+... .+++++...+.+. +..+.+++. | ...
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~-----~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v--- 95 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARM-----QGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAV--- 95 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTS-----SSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEE---
T ss_pred eEEEEECChHHHHHHHHHHhhC-----CCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceE---
Confidence 5899999999999999988754 1566554444433 333333333 5 111
Q ss_pred CcCCHhhhhc--cCCeEEEeecch-hHHHHHHHHHhcCCCCcEEE
Q 012479 168 TLGDIYETIS--GSDLVLLLISDA-AQADNYEKIFSCMKPNSILG 209 (462)
Q Consensus 168 ~~~~~~eav~--~ADvViLavpd~-a~~~vl~eI~~~Lk~gaiL~ 209 (462)
+.|.+++++ +.|+|+++||+. .+.++... .|+.|+-|.
T Consensus 96 -~~D~eeLL~d~dIDaVviaTp~p~~H~e~a~~---AL~AGKHVv 136 (446)
T 3upl_A 96 -TDDNDLILSNPLIDVIIDATGIPEVGAETGIA---AIRNGKHLV 136 (446)
T ss_dssp -ESCHHHHHTCTTCCEEEECSCCHHHHHHHHHH---HHHTTCEEE
T ss_pred -ECCHHHHhcCCCCCEEEEcCCChHHHHHHHHH---HHHcCCcEE
Confidence 468888886 589999999864 44554433 345677554
No 299
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=96.05 E-value=0.012 Score=59.75 Aligned_cols=74 Identities=15% Similarity=0.082 Sum_probs=46.6
Q ss_pred cccCCCCEEEEEcc-cchHHHHHHHHHHhhhhhcCCc--EEEEEecCCchhHHHHHH--cC-ceecC-CCcCCHhhhhcc
Q 012479 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG-FTEEN-GTLGDIYETISG 178 (462)
Q Consensus 106 ~~l~gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~--~Vivg~r~~~~s~~~A~~--~G-~~~~d-~~~~~~~eav~~ 178 (462)
+++.+ +||+|||. |.+|.++|..+... |+ ++++.+....+....+.+ .+ +.... ....+..+++++
T Consensus 4 ~~~~~-~KV~ViGaaG~VG~~~a~~l~~~------g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~d 76 (343)
T 3fi9_A 4 SYLTE-EKLTIVGAAGMIGSNMAQTAAMM------RLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTD 76 (343)
T ss_dssp CCSCS-SEEEEETTTSHHHHHHHHHHHHT------TCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTT
T ss_pred cccCC-CEEEEECCCChHHHHHHHHHHhc------CCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCC
Confidence 45666 99999997 99999999998887 75 565544332222211111 11 11000 012467789999
Q ss_pred CCeEEEee
Q 012479 179 SDLVLLLI 186 (462)
Q Consensus 179 ADvViLav 186 (462)
||+||++.
T Consensus 77 ADvVvita 84 (343)
T 3fi9_A 77 AKYIVSSG 84 (343)
T ss_dssp EEEEEECC
T ss_pred CCEEEEcc
Confidence 99999985
No 300
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.05 E-value=0.005 Score=60.39 Aligned_cols=98 Identities=18% Similarity=0.173 Sum_probs=64.0
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEe
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLa 185 (462)
.++| +++.|||.|-.+.+++..|.+. |. +|.|.+|..++..+.++..+.....-......+.++++|+||.+
T Consensus 122 ~~~~-~~~lilGaGGaarai~~aL~~~------g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNa 194 (269)
T 3tum_A 122 EPAG-KRALVIGCGGVGSAIAYALAEA------GIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANA 194 (269)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEEC
T ss_pred Cccc-CeEEEEecHHHHHHHHHHHHHh------CCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccC
Confidence 4577 9999999999999999999988 86 78888887666555555432110000022233456789999999
Q ss_pred ecchhHHH----HHHHHHhcCCCCcEEEEe
Q 012479 186 ISDAAQAD----NYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 186 vpd~a~~~----vl~eI~~~Lk~gaiL~~a 211 (462)
||...... +-......++++.++.|.
T Consensus 195 Tp~Gm~~~~~~p~~~~~~~~l~~~~~v~D~ 224 (269)
T 3tum_A 195 SPVGMGTRAELPLSAALLATLQPDTLVADV 224 (269)
T ss_dssp SSTTCSTTCCCSSCHHHHHTCCTTSEEEEC
T ss_pred CccccCCCCCCCCChHHHhccCCCcEEEEE
Confidence 99653221 112334456677776655
No 301
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=96.00 E-value=0.013 Score=50.89 Aligned_cols=109 Identities=18% Similarity=0.101 Sum_probs=72.2
Q ss_pred CCEEEEEcc----cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEee
Q 012479 111 INQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (462)
Q Consensus 111 ikkIgIIG~----G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLav 186 (462)
.++|+|||. +..|..+.++|++. |++|+--+.+... -.|... ..++.|+-. -|++++++
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~------g~~V~pVnP~~~~------i~G~~~----y~sl~dlp~-vDlavi~~ 66 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSH------GHEFIPVGRKKGE------VLGKTI----INERPVIEG-VDTVTLYI 66 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHH------TCCEEEESSSCSE------ETTEEC----BCSCCCCTT-CCEEEECS
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHC------CCeEEEECCCCCc------CCCeec----cCChHHCCC-CCEEEEEe
Confidence 378999997 56899999999998 8876544433211 146654 456666555 89999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEeccchHHHhhhccccCCCCccEEecccCCCchh
Q 012479 187 SDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (462)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~gaiL~~a~G~~i~~~~~~~i~~p~~v~VV~v~Pngpg~~ 243 (462)
|++.+.++++++... ... .|.+..|+.-..+.+ +.-..+++++ ||+.+-.
T Consensus 67 p~~~v~~~v~e~~~~-g~k-~v~~~~G~~~~e~~~--~a~~~Girvv---~nC~gv~ 116 (122)
T 3ff4_A 67 NPQNQLSEYNYILSL-KPK-RVIFNPGTENEELEE--ILSENGIEPV---IGCTLVM 116 (122)
T ss_dssp CHHHHGGGHHHHHHH-CCS-EEEECTTCCCHHHHH--HHHHTTCEEE---ESCHHHH
T ss_pred CHHHHHHHHHHHHhc-CCC-EEEECCCCChHHHHH--HHHHcCCeEE---CCcCeEE
Confidence 999999999987653 223 367889983211111 1112467777 3766544
No 302
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=95.98 E-value=0.027 Score=59.61 Aligned_cols=73 Identities=18% Similarity=0.126 Sum_probs=43.1
Q ss_pred CEEEEEcccchH--HHHHHHHHHhhhhhcC-CcEEEEEecCCchhHHHHH--------HcCceecCCCcCCHhhhhccCC
Q 012479 112 NQIGVIGWGSQG--PAQAQNLRDSLAEAKS-DIVVKVGLRKGSRSFAEAR--------AAGFTEENGTLGDIYETISGSD 180 (462)
Q Consensus 112 kkIgIIG~G~mG--~AiA~~Lrds~~~~g~-G~~Vivg~r~~~~s~~~A~--------~~G~~~~d~~~~~~~eav~~AD 180 (462)
+||+|||.|+|| .++|..|... .+. +.+|++.++..++ .+.+. ..+....=....|..+++++||
T Consensus 4 ~KIaVIGAGsVg~g~ala~~La~~---~~l~~~eV~L~Di~~e~-l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD 79 (480)
T 1obb_A 4 VKIGIIGAGSAVFSLRLVSDLCKT---PGLSGSTVTLMDIDEER-LDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDAD 79 (480)
T ss_dssp CEEEEETTTCHHHHHHHHHHHHTC---GGGTTCEEEEECSCHHH-HHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCS
T ss_pred CEEEEECCCchHHHHHHHHHHHhc---CcCCCCEEEEEeCCHHH-HHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCC
Confidence 799999999985 5556677532 011 4577766654332 21111 1111100001357778999999
Q ss_pred eEEEeecc
Q 012479 181 LVLLLISD 188 (462)
Q Consensus 181 vViLavpd 188 (462)
+||+++|.
T Consensus 80 ~VIiaagv 87 (480)
T 1obb_A 80 FVINTAMV 87 (480)
T ss_dssp EEEECCCT
T ss_pred EEEECCCc
Confidence 99999974
No 303
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=95.90 E-value=0.021 Score=57.57 Aligned_cols=93 Identities=15% Similarity=0.138 Sum_probs=58.4
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecC---CchhHHHHHHcCcee--------cCCCc--CCHhhhhc
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK---GSRSFAEARAAGFTE--------ENGTL--GDIYETIS 177 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~---~~~s~~~A~~~G~~~--------~d~~~--~~~~eav~ 177 (462)
+||+||| .|.+|..+++.|.+. .+++++...+. ..+.. ....+... .+-.+ .+.++..+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~-----p~~ev~~i~~s~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADH-----PMFELTALAASERSAGKKY--KDACYWFQDRDIPENIKDMVVIPTDPKHEEF 81 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC-----SSEEEEEEEECTTTTTSBH--HHHSCCCCSSCCCHHHHTCBCEESCTTSGGG
T ss_pred ceEEEECcCCHHHHHHHHHHhcC-----CCCEEEEEEcccccccccH--HHhcccccccccccCceeeEEEeCCHHHHhc
Confidence 6899999 899999999998765 13565444332 11222 22222110 00001 24455556
Q ss_pred -cCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEeccc
Q 012479 178 -GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (462)
Q Consensus 178 -~ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~G~ 214 (462)
++|+||+|+|.....++.+.+. +.|..|++.+|.
T Consensus 82 ~~~DvV~~atp~~~~~~~a~~~~---~aG~~VId~s~~ 116 (354)
T 1ys4_A 82 EDVDIVFSALPSDLAKKFEPEFA---KEGKLIFSNASA 116 (354)
T ss_dssp TTCCEEEECCCHHHHHHHHHHHH---HTTCEEEECCST
T ss_pred CCCCEEEECCCchHHHHHHHHHH---HCCCEEEECCch
Confidence 8999999999988888777654 457778877764
No 304
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=95.89 E-value=0.021 Score=58.97 Aligned_cols=90 Identities=18% Similarity=0.166 Sum_probs=63.0
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecC----Cchh--------HHHHHHcCceecCCCcCCHh
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRK----GSRS--------FAEARAAGFTEENGTLGDIY 173 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~----~~~s--------~~~A~~~G~~~~d~~~~~~~ 173 (462)
.++. .||.|+|.|.+|.++|+.|... |. +|++.+++ ..+. ...|++.... ....++.
T Consensus 189 ~l~~-~kVVv~GAGaAG~~iAkll~~~------G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~---~~~~~L~ 258 (388)
T 1vl6_A 189 KIEE-VKVVVNGIGAAGYNIVKFLLDL------GVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPE---RLSGDLE 258 (388)
T ss_dssp CTTT-CEEEEECCSHHHHHHHHHHHHH------TCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTT---CCCSCHH
T ss_pred CCCC-cEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhcc---CchhhHH
Confidence 5666 8999999999999999999988 88 78888776 3321 3445443211 1246799
Q ss_pred hhhccCCeEEEeecchhHHHHHHHHHhcCCCCcEEE
Q 012479 174 ETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (462)
Q Consensus 174 eav~~ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~ 209 (462)
|+++++|++|=+..|... =+++...|+++.+|.
T Consensus 259 eav~~ADVlIG~Sap~l~---t~emVk~Ma~~pIIf 291 (388)
T 1vl6_A 259 TALEGADFFIGVSRGNIL---KPEWIKKMSRKPVIF 291 (388)
T ss_dssp HHHTTCSEEEECSCSSCS---CHHHHTTSCSSCEEE
T ss_pred HHHccCCEEEEeCCCCcc---CHHHHHhcCCCCEEE
Confidence 999999999988764322 124444577777663
No 305
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.88 E-value=0.027 Score=52.03 Aligned_cols=75 Identities=19% Similarity=0.174 Sum_probs=51.8
Q ss_pred ccccCCCCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCc-ee--cCCCcCCHhhhhccCC
Q 012479 105 PDAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF-TE--ENGTLGDIYETISGSD 180 (462)
Q Consensus 105 ~~~l~gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~-~~--~d~~~~~~~eav~~AD 180 (462)
...|+| |+|.|.|. |.+|.++++.|.+. |++|++..|+.++ .+.....++ .. .|-+ .+..++++++|
T Consensus 16 ~~~l~~-~~ilVtGatG~iG~~l~~~L~~~------G~~V~~~~R~~~~-~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~D 86 (236)
T 3e8x_A 16 NLYFQG-MRVLVVGANGKVARYLLSELKNK------GHEPVAMVRNEEQ-GPELRERGASDIVVANLE-EDFSHAFASID 86 (236)
T ss_dssp -----C-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESSGGG-HHHHHHTTCSEEEECCTT-SCCGGGGTTCS
T ss_pred ccCcCC-CeEEEECCCChHHHHHHHHHHhC------CCeEEEEECChHH-HHHHHhCCCceEEEcccH-HHHHHHHcCCC
Confidence 467889 99999997 99999999999999 9998887776554 333334455 22 1211 45567888999
Q ss_pred eEEEeecc
Q 012479 181 LVLLLISD 188 (462)
Q Consensus 181 vViLavpd 188 (462)
+||.+...
T Consensus 87 ~vi~~ag~ 94 (236)
T 3e8x_A 87 AVVFAAGS 94 (236)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99988764
No 306
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=95.84 E-value=0.021 Score=57.40 Aligned_cols=98 Identities=14% Similarity=0.057 Sum_probs=56.3
Q ss_pred CEEEEEcccchHHHHHHHHHHhh-hhhcCCcEEEEEecCCch---------hH-HHHHHcCceecCCCcCCHhhhhc--c
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSL-AEAKSDIVVKVGLRKGSR---------SF-AEARAAGFTEENGTLGDIYETIS--G 178 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~-~~~g~G~~Vivg~r~~~~---------s~-~~A~~~G~~~~d~~~~~~~eav~--~ 178 (462)
.+|+|||+|.+|..+++.|.+.- ...|.+++++...+.+.. .| +.+++.|... +. ..+..+.+. +
T Consensus 5 irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~-~~-~~d~~e~l~~~~ 82 (325)
T 3ing_A 5 IRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRIS-DR-AFSGPEDLMGEA 82 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSC-SS-BCCSGGGGTTSC
T ss_pred EEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCC-cc-cCCHHHHhcCCC
Confidence 47999999999999999998630 011224454433333221 12 2333445221 10 115566664 5
Q ss_pred CCeEEEeecchhHH-HHHHHHHhcCCCCcEEEEe
Q 012479 179 SDLVLLLISDAAQA-DNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 179 ADvViLavpd~a~~-~vl~eI~~~Lk~gaiL~~a 211 (462)
.|+|+.++|+..+. ..++.+...|+.|+.|+.+
T Consensus 83 iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVta 116 (325)
T 3ing_A 83 ADLLVDCTPASRDGVREYSLYRMAFESGMNVVTA 116 (325)
T ss_dssp CSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEEC
T ss_pred CCEEEECCCCccccchHHHHHHHHHHCCCeEEEc
Confidence 89999999987553 3344455566778766543
No 307
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=95.82 E-value=0.0099 Score=58.03 Aligned_cols=80 Identities=15% Similarity=0.017 Sum_probs=53.7
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecchhH
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~a~ 191 (462)
++|++||+|+||..+++. + +++++..++ ++.. +.|... +.|+++++.++|+|+-|.++++.
T Consensus 13 ~rV~i~G~GaIG~~v~~~-~--------~leLv~v~~--~k~g----elgv~a----~~d~d~lla~pD~VVe~A~~~av 73 (253)
T 1j5p_A 13 MTVLIIGMGNIGKKLVEL-G--------NFEKIYAYD--RISK----DIPGVV----RLDEFQVPSDVSTVVECASPEAV 73 (253)
T ss_dssp CEEEEECCSHHHHHHHHH-S--------CCSEEEEEC--SSCC----CCSSSE----ECSSCCCCTTCCEEEECSCHHHH
T ss_pred ceEEEECcCHHHHHHHhc-C--------CcEEEEEEe--cccc----ccCcee----eCCHHHHhhCCCEEEECCCHHHH
Confidence 899999999999999887 2 444433333 2211 125543 56788888899999999987755
Q ss_pred HHHHHHHHhcCCCCcEE-EEecc
Q 012479 192 ADNYEKIFSCMKPNSIL-GLSHG 213 (462)
Q Consensus 192 ~~vl~eI~~~Lk~gaiL-~~a~G 213 (462)
.+.+ .+.|+.|.-| +.+-|
T Consensus 74 ~e~~---~~iL~aG~dvv~~S~g 93 (253)
T 1j5p_A 74 KEYS---LQILKNPVNYIIISTS 93 (253)
T ss_dssp HHHH---HHHTTSSSEEEECCGG
T ss_pred HHHH---HHHHHCCCCEEEcChh
Confidence 5544 4557788754 44444
No 308
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.82 E-value=0.014 Score=61.06 Aligned_cols=74 Identities=16% Similarity=0.237 Sum_probs=51.5
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHH-HHHcCceecCCCcCC---Hhhh-hccCCeEEEee
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAE-ARAAGFTEENGTLGD---IYET-ISGSDLVLLLI 186 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~-A~~~G~~~~d~~~~~---~~ea-v~~ADvViLav 186 (462)
|||-|+|+|..|..+|+.|... |++|++-+.. +...+. ..+.++....+...+ .++| +++||+++.+|
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~------~~~v~vId~d-~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t 76 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGE------NNDITIVDKD-GDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVT 76 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCST------TEEEEEEESC-HHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCEEEEECC-HHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEc
Confidence 8999999999999999999988 9888776554 444444 445565321111222 3333 78999999888
Q ss_pred cchhHH
Q 012479 187 SDAAQA 192 (462)
Q Consensus 187 pd~a~~ 192 (462)
+++..-
T Consensus 77 ~~De~N 82 (461)
T 4g65_A 77 NTDETN 82 (461)
T ss_dssp SCHHHH
T ss_pred CChHHH
Confidence 876543
No 309
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.81 E-value=0.049 Score=51.40 Aligned_cols=69 Identities=13% Similarity=0.091 Sum_probs=49.4
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecch
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd~ 189 (462)
|||.|+|.|.+|..+++.|.+. |++|++..|...+ .......++........+.+ ++++|+||.+..+.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~------g~~V~~~~r~~~~-~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQ------GWRIIGTSRNPDQ-MEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAPD 74 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGG------TCEEEEEESCGGG-HHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCCB
T ss_pred CcEEEECCcHHHHHHHHHHHHC------CCEEEEEEcChhh-hhhHhhCCCeEEEecccccc--cCCCCEEEECCCcc
Confidence 8999999999999999999998 9998877776443 33444456532111133333 78899999988643
No 310
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=95.72 E-value=0.026 Score=55.64 Aligned_cols=91 Identities=11% Similarity=0.188 Sum_probs=59.2
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCH---hhh-hccCCeEEEeec
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI---YET-ISGSDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~---~ea-v~~ADvViLavp 187 (462)
++|.|+|+|..|..+++.|.+. |+ +++. +.+++..+ +.+.|+..-.+...+. .++ +++||.|+++++
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~------g~-v~vi-d~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~ 186 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGS------EV-FVLA-EDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLE 186 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGS------CE-EEEE-SCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCS
T ss_pred CCEEEECCcHHHHHHHHHHHhC------Cc-EEEE-eCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCC
Confidence 6899999999999999999988 87 6554 45455555 6666764322222232 234 788999999999
Q ss_pred chhHHHHHHHHHhcCCCC-cEEEEe
Q 012479 188 DAAQADNYEKIFSCMKPN-SILGLS 211 (462)
Q Consensus 188 d~a~~~vl~eI~~~Lk~g-aiL~~a 211 (462)
++...-..-..+..+.+. .++.-+
T Consensus 187 ~d~~n~~~~~~ar~~~~~~~iiar~ 211 (336)
T 1lnq_A 187 SDSETIHCILGIRKIDESVRIIAEA 211 (336)
T ss_dssp SHHHHHHHHHHHHTTCTTSEEEEEC
T ss_pred ccHHHHHHHHHHHHHCCCCeEEEEE
Confidence 875443333444445554 344433
No 311
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=95.63 E-value=0.021 Score=57.98 Aligned_cols=92 Identities=11% Similarity=0.039 Sum_probs=57.8
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCcee----cCCCcCCHhhhhccCCeEEEee
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE----ENGTLGDIYETISGSDLVLLLI 186 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~----~d~~~~~~~eav~~ADvViLav 186 (462)
+||+|+| .|.+|..+.+.|.+. ..++++...+..+...+.....+... .+-.+.+ ++..+++|+||+|+
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~-----p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~~vDvVf~at 90 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANH-----PHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCCL 90 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTC-----SSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGGGCSEEEECC
T ss_pred cEEEEECcCCHHHHHHHHHHHcC-----CCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhcCCCEEEEcC
Confidence 6899999 899999999999876 13465544443222222222222110 0000122 44557899999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEecc
Q 012479 187 SDAAQADNYEKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~gaiL~~a~G 213 (462)
|.....+.... + +.|..+++.++
T Consensus 91 p~~~s~~~a~~---~-~aG~~VId~sa 113 (359)
T 1xyg_A 91 PHGTTQEIIKE---L-PTALKIVDLSA 113 (359)
T ss_dssp CTTTHHHHHHT---S-CTTCEEEECSS
T ss_pred CchhHHHHHHH---H-hCCCEEEECCc
Confidence 99887766543 3 66888888776
No 312
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=95.61 E-value=0.019 Score=56.91 Aligned_cols=78 Identities=17% Similarity=0.175 Sum_probs=57.3
Q ss_pred cccCCCCEEEEEcccch-HHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEE
Q 012479 106 DAFNGINQIGVIGWGSQ-GPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~m-G~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViL 184 (462)
..++| +++.|||.|.+ |..+|+.|... |.|-.|.+..+. ..++.+.+++||+||.
T Consensus 154 i~l~g-k~vvVvG~s~iVG~p~A~lL~~~----g~~atVtv~h~~-------------------t~~L~~~~~~ADIVI~ 209 (281)
T 2c2x_A 154 ISIAG-AHVVVIGRGVTVGRPLGLLLTRR----SENATVTLCHTG-------------------TRDLPALTRQADIVVA 209 (281)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHTST----TTCCEEEEECTT-------------------CSCHHHHHTTCSEEEE
T ss_pred CCCCC-CEEEEECCCcHHHHHHHHHHhcC----CCCCEEEEEECc-------------------hhHHHHHHhhCCEEEE
Confidence 46899 99999999986 99999998765 102467665432 2468889999999999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
+++-... +. ...+|+|++|+|++
T Consensus 210 Avg~p~~---I~--~~~vk~GavVIDVg 232 (281)
T 2c2x_A 210 AVGVAHL---LT--ADMVRPGAAVIDVG 232 (281)
T ss_dssp CSCCTTC---BC--GGGSCTTCEEEECC
T ss_pred CCCCCcc---cC--HHHcCCCcEEEEcc
Confidence 9984331 22 23478999988875
No 313
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.60 E-value=0.034 Score=53.08 Aligned_cols=89 Identities=10% Similarity=0.121 Sum_probs=60.6
Q ss_pred cccccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhH-HHHHHcCceecCCCcCCHhhhhcc
Q 012479 100 LFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF-AEARAAGFTEENGTLGDIYETISG 178 (462)
Q Consensus 100 ~f~~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~-~~A~~~G~~~~d~~~~~~~eav~~ 178 (462)
-||.. -.|+| ++|.|||.|.+|..-++.|.+. |.+|+|......+.. +.+.+.++....+ ... .+-+.+
T Consensus 22 ~~Pif-l~L~g-k~VLVVGgG~va~~ka~~Ll~~------GA~VtVvap~~~~~l~~l~~~~~i~~i~~-~~~-~~dL~~ 91 (223)
T 3dfz_A 22 MYTVM-LDLKG-RSVLVVGGGTIATRRIKGFLQE------GAAITVVAPTVSAEINEWEAKGQLRVKRK-KVG-EEDLLN 91 (223)
T ss_dssp CCEEE-ECCTT-CCEEEECCSHHHHHHHHHHGGG------CCCEEEECSSCCHHHHHHHHTTSCEEECS-CCC-GGGSSS
T ss_pred ccccE-EEcCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEECCCCCHHHHHHHHcCCcEEEEC-CCC-HhHhCC
Confidence 36666 56899 9999999999999999999998 888777665433333 3343333432111 122 345788
Q ss_pred CCeEEEeecchhHHHHHHHH
Q 012479 179 SDLVLLLISDAAQADNYEKI 198 (462)
Q Consensus 179 ADvViLavpd~a~~~vl~eI 198 (462)
+|+||.++.+...-..+.+.
T Consensus 92 adLVIaAT~d~~~N~~I~~~ 111 (223)
T 3dfz_A 92 VFFIVVATNDQAVNKFVKQH 111 (223)
T ss_dssp CSEEEECCCCTHHHHHHHHH
T ss_pred CCEEEECCCCHHHHHHHHHH
Confidence 99999999887665544444
No 314
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=95.59 E-value=0.023 Score=57.37 Aligned_cols=93 Identities=11% Similarity=0.049 Sum_probs=56.9
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCcee--cCCCcCCHhhhhccCCeEEEeecc
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE--ENGTLGDIYETISGSDLVLLLISD 188 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~--~d~~~~~~~eav~~ADvViLavpd 188 (462)
+||+||| .|.+|..+.+.|.+. ..++++...+..+...+.....+... .+-.+.+.++ +.++|+||+|+|.
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~-----p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~~~vDvV~~a~g~ 78 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSH-----PYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEK-LEPADILVLALPH 78 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTC-----TTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGG-CCCCSEEEECCCT
T ss_pred CEEEEECCCCHHHHHHHHHHHcC-----CCcEEEEEECchhhCchhHHhCchhcCcccccccchhH-hcCCCEEEEcCCc
Confidence 6899999 799999999999865 13465544443221111111111100 0111223333 5789999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEecc
Q 012479 189 AAQADNYEKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 189 ~a~~~vl~eI~~~Lk~gaiL~~a~G 213 (462)
....++.+.+. +.|..|++.++
T Consensus 79 ~~s~~~a~~~~---~aG~~VId~Sa 100 (345)
T 2ozp_A 79 GVFAREFDRYS---ALAPVLVDLSA 100 (345)
T ss_dssp THHHHTHHHHH---TTCSEEEECSS
T ss_pred HHHHHHHHHHH---HCCCEEEEcCc
Confidence 98877776543 56777777776
No 315
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=95.58 E-value=0.019 Score=56.91 Aligned_cols=69 Identities=16% Similarity=0.147 Sum_probs=42.6
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc--EEEEEecCCchhHHHHHHc----CceecCC--CcCCHhhhhccCCeEE
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAA----GFTEENG--TLGDIYETISGSDLVL 183 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~--~Vivg~r~~~~s~~~A~~~----G~~~~d~--~~~~~~eav~~ADvVi 183 (462)
|||+|||.|.+|.++|..|..+ ++ ++++.+....+..-.|.+. -+...+. ...+..+++++||+|+
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~------~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVv 74 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLN------LDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIV 74 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------SCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEE
Confidence 6999999999999999999887 65 5555444332223233221 0110000 0122346789999999
Q ss_pred Eee
Q 012479 184 LLI 186 (462)
Q Consensus 184 Lav 186 (462)
++.
T Consensus 75 itA 77 (294)
T 2x0j_A 75 VTA 77 (294)
T ss_dssp ECC
T ss_pred Eec
Confidence 976
No 316
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=95.41 E-value=0.042 Score=57.56 Aligned_cols=91 Identities=16% Similarity=0.253 Sum_probs=56.0
Q ss_pred CEEEEEcccchHHHHHHHHHHh---hh-hhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhc--cCCeEEEe
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDS---LA-EAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLL 185 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds---~~-~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~--~ADvViLa 185 (462)
.+|||||+|.+|..++..|++. +. ..|.+++++...+.+....+.. ..+... ..+.+++++ +.|+|+.+
T Consensus 11 irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~-~~~~~~----~~d~~ell~d~diDvVve~ 85 (444)
T 3mtj_A 11 IHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEAL-AGGLPL----TTNPFDVVDDPEIDIVVEL 85 (444)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHH-HTTCCE----ESCTHHHHTCTTCCEEEEC
T ss_pred ccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhh-cccCcc----cCCHHHHhcCCCCCEEEEc
Confidence 3799999999999999887642 11 1123556544444433222211 123332 467888886 57999999
Q ss_pred ecc-hhHHHHHHHHHhcCCCCcEEEE
Q 012479 186 ISD-AAQADNYEKIFSCMKPNSILGL 210 (462)
Q Consensus 186 vpd-~a~~~vl~eI~~~Lk~gaiL~~ 210 (462)
+|+ ..+.++..+ .|+.|+.|..
T Consensus 86 tp~~~~h~~~~~~---AL~aGKhVvt 108 (444)
T 3mtj_A 86 IGGLEPARELVMQ---AIANGKHVVT 108 (444)
T ss_dssp CCSSTTHHHHHHH---HHHTTCEEEE
T ss_pred CCCchHHHHHHHH---HHHcCCEEEE
Confidence 996 777776654 3455665543
No 317
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=95.39 E-value=0.071 Score=53.15 Aligned_cols=67 Identities=13% Similarity=0.186 Sum_probs=43.7
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcCC--cEEEEEecCCchhHHHHH--Hc-Cc--eecCC--CcCCHhhhhccCCe
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSD--IVVKVGLRKGSRSFAEAR--AA-GF--TEENG--TLGDIYETISGSDL 181 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~G--~~Vivg~r~~~~s~~~A~--~~-G~--~~~d~--~~~~~~eav~~ADv 181 (462)
+||+||| .|.+|.+++..|.+. | .+|++.+.... ...+. .. .. .. .. ...+..+++++||+
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~------g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v-~~~~~t~d~~~al~gaDv 79 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMN------PLVSVLHLYDVVNA--PGVTADISHMDTGAVV-RGFLGQQQLEAALTGMDL 79 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHC------TTEEEEEEEESSSH--HHHHHHHHTSCSSCEE-EEEESHHHHHHHHTTCSE
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCCCEEEEEeCCCc--HhHHHHhhcccccceE-EEEeCCCCHHHHcCCCCE
Confidence 7999999 899999999999887 7 46655443332 22221 11 11 11 00 01245788999999
Q ss_pred EEEeec
Q 012479 182 VLLLIS 187 (462)
Q Consensus 182 ViLavp 187 (462)
||++.+
T Consensus 80 Vi~~ag 85 (326)
T 1smk_A 80 IIVPAG 85 (326)
T ss_dssp EEECCC
T ss_pred EEEcCC
Confidence 999985
No 318
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=95.37 E-value=0.031 Score=58.51 Aligned_cols=93 Identities=13% Similarity=0.152 Sum_probs=64.1
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc---EEEEEe----cC----Cchh---HH-----HHHHcCceecC
Q 012479 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI---VVKVGL----RK----GSRS---FA-----EARAAGFTEEN 166 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~---~Vivg~----r~----~~~s---~~-----~A~~~G~~~~d 166 (462)
..+++ ++|.|+|.|..|.+++..|.+. |. +|++.+ |+ .... .. .+...+..
T Consensus 182 ~~l~~-~rvlvlGAGgAg~aia~~L~~~------G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~--- 251 (439)
T 2dvm_A 182 KKISE-ITLALFGAGAAGFATLRILTEA------GVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGE--- 251 (439)
T ss_dssp CCTTT-CCEEEECCSHHHHHHHHHHHHT------TCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTT---
T ss_pred CCccC-CEEEEECccHHHHHHHHHHHHc------CCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccc---
Confidence 35678 8999999999999999999998 87 788888 65 2211 11 11111110
Q ss_pred CCcCCHhhhhccCCeEEEeecc--hhHHHHHHHHHhcCCCCcEEEEe
Q 012479 167 GTLGDIYETISGSDLVLLLISD--AAQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 167 ~~~~~~~eav~~ADvViLavpd--~a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
....+..|+++++|+||-++|. ....+ +....|+++.+|.+.
T Consensus 252 ~~~~~L~e~l~~aDVlInaT~~~~G~~~~---e~v~~m~~~~iVfDL 295 (439)
T 2dvm_A 252 NIEGGPQEALKDADVLISFTRPGPGVIKP---QWIEKMNEDAIVFPL 295 (439)
T ss_dssp CCCSSHHHHHTTCSEEEECSCCCSSSSCH---HHHTTSCTTCEEEEC
T ss_pred cccccHHHHhccCCEEEEcCCCccCCCCh---HHHHhcCCCCEEEEC
Confidence 0134678999999999999997 54432 334567788888777
No 319
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=95.26 E-value=0.047 Score=55.16 Aligned_cols=93 Identities=15% Similarity=0.203 Sum_probs=57.8
Q ss_pred CCEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCC---c--hhHHHHH--HcCceecCCCcC---CHhhhhccC
Q 012479 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG---S--RSFAEAR--AAGFTEENGTLG---DIYETISGS 179 (462)
Q Consensus 111 ikkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~---~--~s~~~A~--~~G~~~~d~~~~---~~~eav~~A 179 (462)
|+||+||| .|.+|..+.+.|.+. ..+++.....+. + +.....- -.|.. +-.+. +.++.++++
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~-----p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~--~~~v~~~~~~~~~~~~~ 76 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRH-----PHMNITALTVSAQSNDAGKLISDLHPQLKGIV--ELPLQPMSDISEFSPGV 76 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHC-----TTEEEEEEEEETTCTTTTSBHHHHCGGGTTTC--CCBEEEESSGGGTCTTC
T ss_pred ceEEEEECCCChHHHHHHHHHHhC-----CCCcEEEEEecCchhhcCCchHHhCccccCcc--ceeEeccCCHHHHhcCC
Confidence 47999999 599999999988874 145554333221 1 2222110 01221 00111 344444899
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 012479 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 180 DvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~G 213 (462)
|+||+|+|.....++.+++. +.|..++|.++
T Consensus 77 Dvvf~a~p~~~s~~~~~~~~---~~g~~vIDlSa 107 (337)
T 3dr3_A 77 DVVFLATAHEVSHDLAPQFL---EAGCVVFDLSG 107 (337)
T ss_dssp SEEEECSCHHHHHHHHHHHH---HTTCEEEECSS
T ss_pred CEEEECCChHHHHHHHHHHH---HCCCEEEEcCC
Confidence 99999999988888777654 46887887766
No 320
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.25 E-value=0.069 Score=48.06 Aligned_cols=69 Identities=16% Similarity=0.190 Sum_probs=46.7
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCC-HhhhhccCCeEEEeecc
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD-IYETISGSDLVLLLISD 188 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~-~~eav~~ADvViLavpd 188 (462)
|||.|+| .|.+|.++++.|.+. |++|++..|..++..... .++......+.+ ..+++.++|+||.+...
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 71 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR------GHEVTAIVRNAGKITQTH--KDINILQKDIFDLTLSDLSDQNVVVDAYGI 71 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCHHHHTTCSEEEECCCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhC------CCEEEEEEcCchhhhhcc--CCCeEEeccccChhhhhhcCCCEEEECCcC
Confidence 5899999 599999999999999 999888777644322221 343221000111 11678899999999864
No 321
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.21 E-value=0.06 Score=53.35 Aligned_cols=67 Identities=18% Similarity=0.085 Sum_probs=48.4
Q ss_pred CCEEEEEcccchHHH-HHHHHHHhhhhhcCCcEEEEEecCCc-hhHHHHHHcCceecCCCcCCHhhhh-ccCCeEEEe
Q 012479 111 INQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLL 185 (462)
Q Consensus 111 ikkIgIIG~G~mG~A-iA~~Lrds~~~~g~G~~Vivg~r~~~-~s~~~A~~~G~~~~d~~~~~~~eav-~~ADvViLa 185 (462)
+|+|.|||.|-+|.+ +|+.|++. |++|.+.++... ...+..++.|+....+ .+.++.. .++|+||+.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~------G~~V~~~D~~~~~~~~~~L~~~gi~v~~g--~~~~~l~~~~~d~vV~S 73 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEA------GFEVSGCDAKMYPPMSTQLEALGIDVYEG--FDAAQLDEFKADVYVIG 73 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHT------TCEEEEEESSCCTTHHHHHHHTTCEEEES--CCGGGGGSCCCSEEEEC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhC------CCEEEEEcCCCCcHHHHHHHhCCCEEECC--CCHHHcCCCCCCEEEEC
Confidence 489999999999996 99999999 999988776542 3345556678764211 2344444 479999984
No 322
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=95.04 E-value=0.13 Score=51.89 Aligned_cols=70 Identities=16% Similarity=0.157 Sum_probs=52.6
Q ss_pred ccCCCCEEEEEccc--chHHHHHHHHHHhhhhhcCCcEEEEEecC----CchhHH----HHHHcCc--eecCCCcCCHhh
Q 012479 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFA----EARAAGF--TEENGTLGDIYE 174 (462)
Q Consensus 107 ~l~gikkIgIIG~G--~mG~AiA~~Lrds~~~~g~G~~Vivg~r~----~~~s~~----~A~~~G~--~~~d~~~~~~~e 174 (462)
.|+| .||++||=| +++.|++..+..- |.++.+...+ ++...+ .|++.|. .. +.+++|
T Consensus 152 ~l~g-l~ia~vGD~~~~va~Sl~~~~~~~------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~----~~d~~e 220 (333)
T 1duv_G 152 AFNE-MTLVYAGDARNNMGNSMLEAAALT------GLDLRLVAPQACWPEAALVTECRALAQQNGGNITL----TEDVAK 220 (333)
T ss_dssp CGGG-CEEEEESCTTSHHHHHHHHHHHHH------CCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEE----ESCHHH
T ss_pred CCCC-cEEEEECCCccchHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEE----EECHHH
Confidence 5788 999999986 9999999999888 9888776543 222222 3346773 33 578999
Q ss_pred hhccCCeEEEeec
Q 012479 175 TISGSDLVLLLIS 187 (462)
Q Consensus 175 av~~ADvViLavp 187 (462)
++++||+|+..+=
T Consensus 221 av~~aDvvytd~w 233 (333)
T 1duv_G 221 GVEGADFIYTDVW 233 (333)
T ss_dssp HHTTCSEEEECCS
T ss_pred HhCCCCEEEeCCc
Confidence 9999999998554
No 323
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=95.04 E-value=0.11 Score=54.90 Aligned_cols=77 Identities=21% Similarity=0.099 Sum_probs=43.3
Q ss_pred CEEEEEcccch-HHHHHHHHHHhhhhhcC-CcEEEEEecCCchhH---HHHH----HcCceecCCCcCCHhhhhccCCeE
Q 012479 112 NQIGVIGWGSQ-GPAQAQNLRDSLAEAKS-DIVVKVGLRKGSRSF---AEAR----AAGFTEENGTLGDIYETISGSDLV 182 (462)
Q Consensus 112 kkIgIIG~G~m-G~AiA~~Lrds~~~~g~-G~~Vivg~r~~~~s~---~~A~----~~G~~~~d~~~~~~~eav~~ADvV 182 (462)
+||+|||.|+. |.++|..|.... .+. +.+|+.+++..++.. +.+. ..+....=....|..+++++||+|
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~~--~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~V 106 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDHL--EEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFV 106 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTT--TTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHhCC--CCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEE
Confidence 59999999997 555665665430 011 235666555432211 1111 111110000135778899999999
Q ss_pred EEeecchh
Q 012479 183 LLLISDAA 190 (462)
Q Consensus 183 iLavpd~a 190 (462)
|+++|...
T Consensus 107 Viaag~~~ 114 (472)
T 1u8x_X 107 MAHIRVGK 114 (472)
T ss_dssp EECCCTTH
T ss_pred EEcCCCcc
Confidence 99998743
No 324
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=94.97 E-value=0.14 Score=51.78 Aligned_cols=70 Identities=19% Similarity=0.149 Sum_probs=52.4
Q ss_pred ccCCCCEEEEEccc--chHHHHHHHHHHhhhhhcCCcEEEEEecCC----chhHH----HHHHcC--ceecCCCcCCHhh
Q 012479 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAG--FTEENGTLGDIYE 174 (462)
Q Consensus 107 ~l~gikkIgIIG~G--~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~----~~s~~----~A~~~G--~~~~d~~~~~~~e 174 (462)
.|+| .||++||=| +++.|++..+..- |.++.+...+. ....+ .|++.| +.. +.+++|
T Consensus 152 ~l~g-l~va~vGD~~~~va~Sl~~~~~~~------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~----~~d~~e 220 (335)
T 1dxh_A 152 PLHD-ISYAYLGDARNNMGNSLLLIGAKL------GMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTL----TEDPKE 220 (335)
T ss_dssp CGGG-CEEEEESCCSSHHHHHHHHHHHHT------TCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEE----ESCHHH
T ss_pred CcCC-eEEEEecCCccchHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEE----EeCHHH
Confidence 5788 999999986 9999999999888 99887765432 22222 333667 333 578999
Q ss_pred hhccCCeEEEeec
Q 012479 175 TISGSDLVLLLIS 187 (462)
Q Consensus 175 av~~ADvViLavp 187 (462)
++++||+|+..+=
T Consensus 221 av~~aDvvytd~w 233 (335)
T 1dxh_A 221 AVKGVDFVHTDVW 233 (335)
T ss_dssp HTTTCSEEEECCC
T ss_pred HhCCCCEEEeCCc
Confidence 9999999998554
No 325
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=94.93 E-value=0.074 Score=55.68 Aligned_cols=75 Identities=20% Similarity=0.094 Sum_probs=44.4
Q ss_pred CEEEEEcccch-HHHHHHHHHH--hhhhhcC-CcEEEEEecCC--chhHH---HHH----HcCceecCCCcCCHhhhhcc
Q 012479 112 NQIGVIGWGSQ-GPAQAQNLRD--SLAEAKS-DIVVKVGLRKG--SRSFA---EAR----AAGFTEENGTLGDIYETISG 178 (462)
Q Consensus 112 kkIgIIG~G~m-G~AiA~~Lrd--s~~~~g~-G~~Vivg~r~~--~~s~~---~A~----~~G~~~~d~~~~~~~eav~~ 178 (462)
+||+|||.|+. |.+++..|.. . +. +.+|+..++.. .+... .+. ..+....=....|..+++++
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~~~----~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~g 83 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKRYH----ELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDG 83 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTT----TCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCC----CCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCC
Confidence 69999999998 7777777765 3 11 22566555543 22111 111 12211000013577889999
Q ss_pred CCeEEEeecchh
Q 012479 179 SDLVLLLISDAA 190 (462)
Q Consensus 179 ADvViLavpd~a 190 (462)
||+||++++...
T Consensus 84 AD~VVitagv~~ 95 (450)
T 1s6y_A 84 ADFVTTQFRVGG 95 (450)
T ss_dssp CSEEEECCCTTH
T ss_pred CCEEEEcCCCCC
Confidence 999999999643
No 326
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=94.89 E-value=0.18 Score=50.55 Aligned_cols=70 Identities=16% Similarity=0.207 Sum_probs=52.3
Q ss_pred cccCCCCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCC----chhHH----HHHHcC--ceecCCCcCCHhh
Q 012479 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAG--FTEENGTLGDIYE 174 (462)
Q Consensus 106 ~~l~gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~----~~s~~----~A~~~G--~~~~d~~~~~~~e 174 (462)
..|+| .||++||= +++.+|++..+..- |.++.+..... ....+ .|++.| +.. +.+++|
T Consensus 151 g~l~g-l~va~vGD~~rva~Sl~~~~~~~------g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~----~~d~~e 219 (315)
T 1pvv_A 151 GTIKG-VKVVYVGDGNNVAHSLMIAGTKL------GADVVVATPEGYEPDEKVIKWAEQNAAESGGSFEL----LHDPVK 219 (315)
T ss_dssp SCCTT-CEEEEESCCCHHHHHHHHHHHHT------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEE----ESCHHH
T ss_pred CCcCC-cEEEEECCCcchHHHHHHHHHHC------CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEE----EeCHHH
Confidence 35788 99999997 79999999999887 98887765432 22222 333667 333 578999
Q ss_pred hhccCCeEEEee
Q 012479 175 TISGSDLVLLLI 186 (462)
Q Consensus 175 av~~ADvViLav 186 (462)
++++||+|+..+
T Consensus 220 av~~aDvvy~~~ 231 (315)
T 1pvv_A 220 AVKDADVIYTDV 231 (315)
T ss_dssp HTTTCSEEEECC
T ss_pred HhCCCCEEEEcc
Confidence 999999999855
No 327
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=94.89 E-value=0.019 Score=58.34 Aligned_cols=22 Identities=32% Similarity=0.364 Sum_probs=20.3
Q ss_pred CEEEEEcccchHHHHHHHHHHh
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDS 133 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds 133 (462)
.+|||||+|.+|..++..|++.
T Consensus 5 i~vgIiG~G~VG~~~~~~l~~~ 26 (358)
T 1ebf_A 5 VNVAVIGAGVVGSAFLDQLLAM 26 (358)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC
T ss_pred EEEEEEecCHHHHHHHHHHHhc
Confidence 5899999999999999999875
No 328
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=94.85 E-value=0.059 Score=54.37 Aligned_cols=93 Identities=11% Similarity=0.075 Sum_probs=55.5
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEec-CCchhHHHHHHcCce--------ecCCCc--CCHhhhhccC
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLR-KGSRSFAEARAAGFT--------EENGTL--GDIYETISGS 179 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r-~~~~s~~~A~~~G~~--------~~d~~~--~~~~eav~~A 179 (462)
.||+||| .|.+|..+.+.|.+. ..++++...+ ..+.........++. ..+-.+ .+.++ ++++
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~-----p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~v 78 (350)
T 2ep5_A 5 IKVSLLGSTGMVGQKMVKMLAKH-----PYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-HKDV 78 (350)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTC-----SSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-GTTC
T ss_pred cEEEEECcCCHHHHHHHHHHHhC-----CCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-hcCC
Confidence 6899999 899999999988765 1346544432 111111122222211 000001 13333 4789
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 012479 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 180 DvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~G 213 (462)
|+||+|+|.....++..... +.|..|++.++
T Consensus 79 DvVf~atp~~~s~~~a~~~~---~aG~~VId~s~ 109 (350)
T 2ep5_A 79 DVVLSALPNELAESIELELV---KNGKIVVSNAS 109 (350)
T ss_dssp SEEEECCCHHHHHHHHHHHH---HTTCEEEECSS
T ss_pred CEEEECCChHHHHHHHHHHH---HCCCEEEECCc
Confidence 99999999988887776654 45766777665
No 329
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=94.84 E-value=0.068 Score=51.29 Aligned_cols=87 Identities=15% Similarity=0.219 Sum_probs=54.5
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCC-------------------chhHHHHHHc----
Q 012479 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG-------------------SRSFAEARAA---- 160 (462)
Q Consensus 105 ~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~-------------------~~s~~~A~~~---- 160 (462)
...|++ ++|.|||+|-+|..++.+|..+ |+ ++.+.++.. .+....++..
T Consensus 23 q~~l~~-~~VlvvG~GglG~~va~~La~~------Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n 95 (251)
T 1zud_1 23 QQKLLD-SQVLIIGLGGLGTPAALYLAGA------GVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLN 95 (251)
T ss_dssp HHHHHT-CEEEEECCSTTHHHHHHHHHHT------TCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHC
T ss_pred HHHHhc-CcEEEEccCHHHHHHHHHHHHc------CCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHC
Confidence 467888 9999999999999999999998 87 555543321 1222222111
Q ss_pred -Cceec--CCCc--CCHhhhhccCCeEEEeecchhHHHHHHHH
Q 012479 161 -GFTEE--NGTL--GDIYETISGSDLVLLLISDAAQADNYEKI 198 (462)
Q Consensus 161 -G~~~~--d~~~--~~~~eav~~ADvViLavpd~a~~~vl~eI 198 (462)
++... +... .+..+.++++|+||.++........+.+.
T Consensus 96 p~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~ 138 (251)
T 1zud_1 96 PDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAA 138 (251)
T ss_dssp TTSEEEEECSCCCHHHHHHHHHHCSEEEECCSSHHHHHHHHHH
T ss_pred CCCEEEEEeccCCHHHHHHHHhcCCEEEECCCCHHHHHHHHHH
Confidence 22110 0001 12346778899999999876655555553
No 330
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=94.74 E-value=0.099 Score=52.60 Aligned_cols=92 Identities=14% Similarity=0.124 Sum_probs=55.4
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecC--CchhHHHHHHc----C------------ceecCC------
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK--GSRSFAEARAA----G------------FTEENG------ 167 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~--~~~s~~~A~~~----G------------~~~~d~------ 167 (462)
.||||+|+|.+|.-+++.|.+. .+++++...+. +........++ | +.. ++
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~-----~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v-~g~~i~v~ 77 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNS-----GKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVI-NGNPITIF 77 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----CSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEE-TTEEEEEE
T ss_pred eEEEEEccCHHHHHHHHHHHcC-----CCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEE-CCeEEEEE
Confidence 5999999999999999998765 14676554442 33322222221 1 000 00
Q ss_pred CcCCHhhhh---ccCCeEEEeecchhHHHHHHHHHhcCCCCc-EEEEec
Q 012479 168 TLGDIYETI---SGSDLVLLLISDAAQADNYEKIFSCMKPNS-ILGLSH 212 (462)
Q Consensus 168 ~~~~~~eav---~~ADvViLavpd~a~~~vl~eI~~~Lk~ga-iL~~a~ 212 (462)
...++++.- .++|+||.|+|.....+... .+++.|. .|.+++
T Consensus 78 ~~~d~~~l~~~~~~vDvV~eatg~~~~~e~a~---~~l~aGak~V~iSa 123 (335)
T 1u8f_O 78 QERDPSKIKWGDAGAEYVVESTGVFTTMEKAG---AHLQGGAKRVIISA 123 (335)
T ss_dssp CCSSGGGCCTTTTTCCEEEECSSSCCSHHHHG---GGGGGTCSEEEESS
T ss_pred ecCCHHHCccccCCCCEEEECCCchhhHHHHH---HHHhCCCeEEEecc
Confidence 012444441 57899999999988877654 4566784 444444
No 331
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=94.71 E-value=0.086 Score=51.93 Aligned_cols=66 Identities=24% Similarity=0.269 Sum_probs=41.4
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcCCc--EEEEEecC-CchhH-HHHHHc--------CceecCCCcCCHhhhhcc
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRK-GSRSF-AEARAA--------GFTEENGTLGDIYETISG 178 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~--~Vivg~r~-~~~s~-~~A~~~--------G~~~~d~~~~~~~eav~~ 178 (462)
+||+||| .|.+|.+++..|... ++ ++.+.+++ +.... ..+.+. .... ..+..+++++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~------~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v----~~~~~~a~~~ 70 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALR------DIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRV----RQGGYEDTAG 70 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEE----EECCGGGGTT
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEE----EeCCHHHhCC
Confidence 5899999 999999999999877 64 45444441 22211 111110 1111 1123678999
Q ss_pred CCeEEEeec
Q 012479 179 SDLVLLLIS 187 (462)
Q Consensus 179 ADvViLavp 187 (462)
||+||++..
T Consensus 71 aDvVi~~ag 79 (303)
T 1o6z_A 71 SDVVVITAG 79 (303)
T ss_dssp CSEEEECCC
T ss_pred CCEEEEcCC
Confidence 999999975
No 332
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=94.67 E-value=0.11 Score=50.12 Aligned_cols=79 Identities=16% Similarity=0.280 Sum_probs=53.5
Q ss_pred CEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhc-cCCeEEEeecch
Q 012479 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLLISDA 189 (462)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~-~ADvViLavpd~ 189 (462)
+||+|+|+ |.||..++..+.+. .+++++...+.+ .+.++++. ++|+||=.++|.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~-----~~~elva~~d~~-------------------~dl~~~~~~~~DvvIDfT~p~ 56 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAA-----DDLTLSAELDAG-------------------DPLSLLTDGNTEVVIDFTHPD 56 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHC-----TTCEEEEEECTT-------------------CCTHHHHHTTCCEEEECSCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEccC-------------------CCHHHHhccCCcEEEEccChH
Confidence 48999996 99999999998754 167776555532 12334443 789999888888
Q ss_pred hHHHHHHHHHhcCCCCc-EEEEeccchHH
Q 012479 190 AQADNYEKIFSCMKPNS-ILGLSHGFLLG 217 (462)
Q Consensus 190 a~~~vl~eI~~~Lk~ga-iL~~a~G~~i~ 217 (462)
...+.+..... .|. +|+-+.|++-.
T Consensus 57 a~~~~~~~a~~---~g~~~VigTTG~~~e 82 (245)
T 1p9l_A 57 VVMGNLEFLID---NGIHAVVGTTGFTAE 82 (245)
T ss_dssp THHHHHHHHHH---TTCEEEECCCCCCHH
T ss_pred HHHHHHHHHHH---cCCCEEEcCCCCCHH
Confidence 88777765443 344 44445677543
No 333
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.65 E-value=0.054 Score=56.12 Aligned_cols=70 Identities=19% Similarity=0.195 Sum_probs=50.8
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCC---chhHHHHHHcCceecCCCcCCHhhhhcc-CCeE
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG---SRSFAEARAAGFTEENGTLGDIYETISG-SDLV 182 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~---~~s~~~A~~~G~~~~d~~~~~~~eav~~-ADvV 182 (462)
.++| ++|.|||.|-.|.+.|+-|++. |++|.+.++.. +...+..++.|+....+ .+.++.+.+ +|+|
T Consensus 6 ~~~~-k~v~viG~G~sG~s~A~~l~~~------G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g--~~~~~~~~~~~d~v 76 (451)
T 3lk7_A 6 TFEN-KKVLVLGLARSGEAAARLLAKL------GAIVTVNDGKPFDENPTAQSLLEEGIKVVCG--SHPLELLDEDFCYM 76 (451)
T ss_dssp TTTT-CEEEEECCTTTHHHHHHHHHHT------TCEEEEEESSCGGGCHHHHHHHHTTCEEEES--CCCGGGGGSCEEEE
T ss_pred hcCC-CEEEEEeeCHHHHHHHHHHHhC------CCEEEEEeCCcccCChHHHHHHhCCCEEEEC--CChHHhhcCCCCEE
Confidence 4678 9999999999999999999999 99998877643 23345556678754211 123345566 8999
Q ss_pred EEe
Q 012479 183 LLL 185 (462)
Q Consensus 183 iLa 185 (462)
|+.
T Consensus 77 v~s 79 (451)
T 3lk7_A 77 IKN 79 (451)
T ss_dssp EEC
T ss_pred EEC
Confidence 985
No 334
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=94.60 E-value=0.085 Score=54.94 Aligned_cols=69 Identities=22% Similarity=0.214 Sum_probs=49.5
Q ss_pred cCCCCEEEEEcccchHHH-HHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEe
Q 012479 108 FNGINQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (462)
Q Consensus 108 l~gikkIgIIG~G~mG~A-iA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLa 185 (462)
+..+++|.|||+|-.|.+ +|+-|.+. |.+|.+.+...+...+..++.|+.... ....+.++++|+||+.
T Consensus 15 ~~~~~~i~viG~G~sG~s~~A~~l~~~------G~~V~~~D~~~~~~~~~l~~~gi~~~~---g~~~~~~~~a~~vv~s 84 (475)
T 1p3d_A 15 MRRVQQIHFIGIGGAGMSGIAEILLNE------GYQISGSDIADGVVTQRLAQAGAKIYI---GHAEEHIEGASVVVVS 84 (475)
T ss_dssp CTTCCEEEEETTTSTTHHHHHHHHHHH------TCEEEEEESCCSHHHHHHHHTTCEEEE---SCCGGGGTTCSEEEEC
T ss_pred cccCCEEEEEeecHHHHHHHHHHHHhC------CCEEEEECCCCCHHHHHHHhCCCEEEC---CCCHHHcCCCCEEEEC
Confidence 344589999999999997 99999998 999887776554444455567876421 1222456789998884
No 335
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=94.54 E-value=0.062 Score=49.01 Aligned_cols=72 Identities=15% Similarity=0.213 Sum_probs=47.1
Q ss_pred CEEEEEc-ccchHHHHHHHHH-HhhhhhcCCcEEEEEecCCc-hhHHHH-HHcCceecCCCcCC---HhhhhccCCeEEE
Q 012479 112 NQIGVIG-WGSQGPAQAQNLR-DSLAEAKSDIVVKVGLRKGS-RSFAEA-RAAGFTEENGTLGD---IYETISGSDLVLL 184 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr-ds~~~~g~G~~Vivg~r~~~-~s~~~A-~~~G~~~~d~~~~~---~~eav~~ADvViL 184 (462)
|+|.|+| .|.+|.++++.|. +. |++|++..|+.+ +..+.+ ...++......+.+ ..++++++|+||.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~ 79 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYT------DMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFV 79 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHC------CCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcC------CceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEE
Confidence 5699999 6999999999999 78 999888777643 222221 11222210011223 3467889999999
Q ss_pred eecch
Q 012479 185 LISDA 189 (462)
Q Consensus 185 avpd~ 189 (462)
+....
T Consensus 80 ~ag~~ 84 (221)
T 3r6d_A 80 GAMES 84 (221)
T ss_dssp SCCCC
T ss_pred cCCCC
Confidence 88753
No 336
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=94.47 E-value=0.094 Score=52.20 Aligned_cols=69 Identities=13% Similarity=0.150 Sum_probs=43.4
Q ss_pred CEEEEEcc-cchHHHHHHHHHHhhhhhcCCc-------EEEEEecCC----ch-hHHHHH--HcC---ceecCCCcCCHh
Q 012479 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI-------VVKVGLRKG----SR-SFAEAR--AAG---FTEENGTLGDIY 173 (462)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~-------~Vivg~r~~----~~-s~~~A~--~~G---~~~~d~~~~~~~ 173 (462)
+||+|||. |.+|.+++..|... |+ +++. .+.+ .. ....+. ..+ +...-....+..
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~------~~~~~~~~~ev~l-~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~ 78 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANG------DMLGKDQPVILQL-LEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPM 78 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT------TTTCTTCCEEEEE-ECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHH
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCcCCCCCCEEEE-EcCCCccccccchhhHHHHhhhcccccCcEEEecCcH
Confidence 79999997 99999999999877 64 5554 4443 21 111111 121 110000125678
Q ss_pred hhhccCCeEEEeec
Q 012479 174 ETISGSDLVLLLIS 187 (462)
Q Consensus 174 eav~~ADvViLavp 187 (462)
+++++||+||++..
T Consensus 79 ~al~~aD~Vi~~ag 92 (329)
T 1b8p_A 79 TAFKDADVALLVGA 92 (329)
T ss_dssp HHTTTCSEEEECCC
T ss_pred HHhCCCCEEEEeCC
Confidence 89999999998864
No 337
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=94.46 E-value=0.045 Score=53.02 Aligned_cols=72 Identities=22% Similarity=0.194 Sum_probs=49.6
Q ss_pred cCCCCEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHc----Cc--eecCCCcCC---Hhhhhc
Q 012479 108 FNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA----GF--TEENGTLGD---IYETIS 177 (462)
Q Consensus 108 l~gikkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~----G~--~~~d~~~~~---~~eav~ 177 (462)
++| +++.|+| .|-+|.+++..|.+. |.+|++..|+.++..+.+.+. ++ ...| +.+ ..++++
T Consensus 117 l~g-k~vlVtGaaGGiG~aia~~L~~~------G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D--~~~~~~~~~~~~ 187 (287)
T 1lu9_A 117 VKG-KKAVVLAGTGPVGMRSAALLAGE------GAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAE--TADDASRAEAVK 187 (287)
T ss_dssp CTT-CEEEEETCSSHHHHHHHHHHHHT------TCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEE--CCSHHHHHHHTT
T ss_pred CCC-CEEEEECCCcHHHHHHHHHHHHC------cCEEEEEECCHHHHHHHHHHHHhcCCcEEEEec--CCCHHHHHHHHH
Confidence 678 9999999 999999999999998 988888877644433333221 21 1101 222 345677
Q ss_pred cCCeEEEeecc
Q 012479 178 GSDLVLLLISD 188 (462)
Q Consensus 178 ~ADvViLavpd 188 (462)
++|+||.+++.
T Consensus 188 ~~DvlVn~ag~ 198 (287)
T 1lu9_A 188 GAHFVFTAGAI 198 (287)
T ss_dssp TCSEEEECCCT
T ss_pred hCCEEEECCCc
Confidence 78888888864
No 338
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=94.38 E-value=0.036 Score=51.39 Aligned_cols=84 Identities=13% Similarity=0.183 Sum_probs=52.1
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcCC-cEEEEEecCCchhHHHHHHcCceecCCCcCC---HhhhhccCCeEEEee
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVLLLI 186 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~G-~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~---~~eav~~ADvViLav 186 (462)
|+|.|.| .|-+|.++++.|.+. | .+|++..|..++..+ ....++......+.+ ..++++++|+||.+.
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~~------G~~~V~~~~R~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a 96 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLADK------QTIKQTLFARQPAKIHK-PYPTNSQIIMGDVLNHAALKQAMQGQDIVYANL 96 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC------TTEEEEEEESSGGGSCS-SCCTTEEEEECCTTCHHHHHHHHTTCSEEEEEC
T ss_pred cEEEEEeCCcHHHHHHHHHHHhC------CCceEEEEEcChhhhcc-cccCCcEEEEecCCCHHHHHHHhcCCCEEEEcC
Confidence 7899999 699999999999998 8 788877776433211 111122211111223 446788999999887
Q ss_pred cchhHHHHHHHHHhcC
Q 012479 187 SDAAQADNYEKIFSCM 202 (462)
Q Consensus 187 pd~a~~~vl~eI~~~L 202 (462)
.........+.+.+.+
T Consensus 97 ~~~~~~~~~~~~~~~~ 112 (236)
T 3qvo_A 97 TGEDLDIQANSVIAAM 112 (236)
T ss_dssp CSTTHHHHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHH
Confidence 7644433333444443
No 339
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=94.32 E-value=0.095 Score=55.08 Aligned_cols=69 Identities=17% Similarity=0.165 Sum_probs=52.2
Q ss_pred CCEEEEEcccchHHH-HHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEe--ec
Q 012479 111 INQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL--IS 187 (462)
Q Consensus 111 ikkIgIIG~G~mG~A-iA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLa--vp 187 (462)
+++|.|||.|-.|.+ +|+-|++. |.+|.+.+...+...+..++.|+... .....+.+.++|+||+. +|
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~------G~~V~~~D~~~~~~~~~l~~~gi~~~---~g~~~~~~~~~d~vV~Spgi~ 92 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANE------GYQISGSDLAPNSVTQHLTALGAQIY---FHHRPENVLDASVVVVSTAIS 92 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHT------TCEEEEECSSCCHHHHHHHHTTCEEE---SSCCGGGGTTCSEEEECTTSC
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHCCCEEE---CCCCHHHcCCCCEEEECCCCC
Confidence 489999999999996 89999999 99998877665555566677788652 22334457789999985 55
Q ss_pred c
Q 012479 188 D 188 (462)
Q Consensus 188 d 188 (462)
+
T Consensus 93 ~ 93 (494)
T 4hv4_A 93 A 93 (494)
T ss_dssp T
T ss_pred C
Confidence 4
No 340
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.28 E-value=0.29 Score=49.50 Aligned_cols=96 Identities=18% Similarity=0.165 Sum_probs=62.0
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHHcCceec-CCCcCCHhhhh------ccCC
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~eav------~~AD 180 (462)
.| .+|.|+|.|.+|...++-++.. |. +|+ +.+.+++..+.+++.|.... +....+..+.+ +..|
T Consensus 213 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi-~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D 284 (404)
T 3ip1_A 213 PG-DNVVILGGGPIGLAAVAILKHA------GASKVI-LSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAK 284 (404)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEE-EECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCS
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEE-EECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCC
Confidence 46 8999999999999999999988 88 554 45555666788899886421 11112333332 2589
Q ss_pred eEEEeecch--hHHHHHHHHHhcCCCCcEEEEec
Q 012479 181 LVLLLISDA--AQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 181 vViLavpd~--a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
+||-++... .....++-+...++++-.++..+
T Consensus 285 ~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 285 LFLEATGVPQLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp EEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred EEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeC
Confidence 999999876 22233333323347776665554
No 341
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.24 E-value=0.24 Score=49.35 Aligned_cols=92 Identities=18% Similarity=0.196 Sum_probs=60.5
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHHcCceec-CCCc--CCHhhhhc-----cC
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~-d~~~--~~~~eav~-----~A 179 (462)
.| .+|.|+|.|.+|...++-++.. |. +|++ ...+++..+.+++.|.... +... .+..+.+. ..
T Consensus 191 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~-~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~ 262 (373)
T 1p0f_A 191 PG-STCAVFGLGGVGFSAIVGCKAA------GASRIIG-VGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGV 262 (373)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEE-ECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEE-ECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCC
Confidence 46 8999999999999999999888 87 5654 4444556788888886320 1000 12333332 57
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCC-cEEEEe
Q 012479 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGLS 211 (462)
Q Consensus 180 DvViLavpd~a~~~vl~eI~~~Lk~g-aiL~~a 211 (462)
|+||-++... +.+++....++++ -.++..
T Consensus 263 Dvvid~~g~~---~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 263 DYAVECAGRI---ETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp SEEEECSCCH---HHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCCH---HHHHHHHHHHhcCCCEEEEE
Confidence 9999998742 2345556677776 555444
No 342
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=94.20 E-value=0.11 Score=51.89 Aligned_cols=71 Identities=21% Similarity=0.227 Sum_probs=52.7
Q ss_pred cccCCCCEEEEEccc--chHHHHHHHHHHhhhhhcCCcEEEEEecCC----chhHH----HHHHcC--ceecCCCcCCHh
Q 012479 106 DAFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAG--FTEENGTLGDIY 173 (462)
Q Consensus 106 ~~l~gikkIgIIG~G--~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~----~~s~~----~A~~~G--~~~~d~~~~~~~ 173 (462)
..|+| .||++||=| ++.+|++..+..- |.++.+...+. ....+ .|++.| +.. +.+++
T Consensus 144 g~l~g-l~va~vGD~~~rva~Sl~~~~~~~------g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~----~~d~~ 212 (307)
T 2i6u_A 144 GALRG-LRLSYFGDGANNMAHSLLLGGVTA------GIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTV----TADAH 212 (307)
T ss_dssp SCCTT-CEEEEESCTTSHHHHHHHHHHHHT------TCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEE----ESCHH
T ss_pred CCcCC-eEEEEECCCCcCcHHHHHHHHHHC------CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEE----EECHH
Confidence 35788 999999986 9999999999888 99887765432 12222 233667 333 57899
Q ss_pred hhhccCCeEEEeec
Q 012479 174 ETISGSDLVLLLIS 187 (462)
Q Consensus 174 eav~~ADvViLavp 187 (462)
|++++||+|+..+=
T Consensus 213 eav~~aDvvy~~~w 226 (307)
T 2i6u_A 213 AAAAGADVLVTDTW 226 (307)
T ss_dssp HHHTTCSEEEECCS
T ss_pred HHhcCCCEEEecce
Confidence 99999999998553
No 343
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=94.15 E-value=0.11 Score=52.32 Aligned_cols=70 Identities=11% Similarity=0.116 Sum_probs=52.2
Q ss_pred ccCCCCEEEEEccc--chHHHHHHHHHHhhhhhcCCcEEEEEecCC----chhHH----HHHHcC--ceecCCCcCCHhh
Q 012479 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAG--FTEENGTLGDIYE 174 (462)
Q Consensus 107 ~l~gikkIgIIG~G--~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~----~~s~~----~A~~~G--~~~~d~~~~~~~e 174 (462)
.|+| .||++||=| ++..|++..+..- |.++.+...+. +...+ .|++.| +.. +.+++|
T Consensus 164 ~l~g-l~va~vGD~~~rva~Sl~~~~~~~------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~----~~d~~e 232 (325)
T 1vlv_A 164 RLKG-VKVVFMGDTRNNVATSLMIACAKM------GMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSF----TSNLEE 232 (325)
T ss_dssp CSTT-CEEEEESCTTSHHHHHHHHHHHHT------TCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEE----ESCHHH
T ss_pred CcCC-cEEEEECCCCcCcHHHHHHHHHHC------CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEE----EcCHHH
Confidence 5788 999999985 9999999999888 99887765432 22222 333667 333 578999
Q ss_pred hhccCCeEEEeec
Q 012479 175 TISGSDLVLLLIS 187 (462)
Q Consensus 175 av~~ADvViLavp 187 (462)
++++||+|+..+=
T Consensus 233 av~~aDvvyt~~w 245 (325)
T 1vlv_A 233 ALAGADVVYTDVW 245 (325)
T ss_dssp HHTTCSEEEECCC
T ss_pred HHccCCEEEeccc
Confidence 9999999998543
No 344
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=94.13 E-value=0.26 Score=49.22 Aligned_cols=71 Identities=14% Similarity=0.080 Sum_probs=50.6
Q ss_pred ccC-CCCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecC----CchhHHHH----HHcCceecCCCcCCHhhhh
Q 012479 107 AFN-GINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFAEA----RAAGFTEENGTLGDIYETI 176 (462)
Q Consensus 107 ~l~-gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~----~~~s~~~A----~~~G~~~~d~~~~~~~eav 176 (462)
.|+ | .||++||= +++.+|++..+..- |.++.+...+ +....+.+ ++.|.... .+.+++|++
T Consensus 142 ~l~~g-l~va~vGD~~~va~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~--~~~d~~eav 212 (307)
T 3tpf_A 142 MQNGI-AKVAFIGDSNNMCNSWLITAAIL------GFEISIAMPKNYKISPEIWEFAMKQALISGAKIS--LGYDKFEAL 212 (307)
T ss_dssp CGGGC-CEEEEESCSSHHHHHHHHHHHHH------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEE--EESCHHHHH
T ss_pred CCCCC-CEEEEEcCCCccHHHHHHHHHHc------CCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEE--EEcCHHHHh
Confidence 477 9 99999995 58999999999887 8887776443 22222333 35554210 157899999
Q ss_pred ccCCeEEEee
Q 012479 177 SGSDLVLLLI 186 (462)
Q Consensus 177 ~~ADvViLav 186 (462)
++||+|+..+
T Consensus 213 ~~aDvvyt~~ 222 (307)
T 3tpf_A 213 KDKDVVITDT 222 (307)
T ss_dssp TTCSEEEECC
T ss_pred cCCCEEEecC
Confidence 9999999877
No 345
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=94.00 E-value=0.057 Score=54.81 Aligned_cols=89 Identities=16% Similarity=0.164 Sum_probs=54.9
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcCC------cEEEEEecCC--chhHHHH----HH-cCceecCCCcCCHhhhhc
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSD------IVVKVGLRKG--SRSFAEA----RA-AGFTEENGTLGDIYETIS 177 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~G------~~Vivg~r~~--~~s~~~A----~~-~G~~~~d~~~~~~~eav~ 177 (462)
+||+||| .|.+|..+.+.|.+. + ++++...+.. .+..... .. ...... ..+ .+.++
T Consensus 10 ~kVaIvGATG~vG~~llr~L~~~------~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~---~~~-~~~~~ 79 (352)
T 2nqt_A 10 TKVAVAGASGYAGGEILRLLLGH------PAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVE---PTE-AAVLG 79 (352)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTC------HHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCE---ECC-HHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHcC------CCCCCccEEEEEEECCCcCCCchhhhcccccccceeeec---cCC-HHHhc
Confidence 7999999 999999999999876 5 2444433321 1211100 00 011110 123 34466
Q ss_pred cCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEeccc
Q 012479 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (462)
Q Consensus 178 ~ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~G~ 214 (462)
++|+||+|+|.....++.+.+ +.|..++|.++-
T Consensus 80 ~~DvVf~alg~~~s~~~~~~~----~~G~~vIDlSa~ 112 (352)
T 2nqt_A 80 GHDAVFLALPHGHSAVLAQQL----SPETLIIDCGAD 112 (352)
T ss_dssp TCSEEEECCTTSCCHHHHHHS----CTTSEEEECSST
T ss_pred CCCEEEECCCCcchHHHHHHH----hCCCEEEEECCC
Confidence 899999999998777666544 467777777653
No 346
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=93.98 E-value=0.15 Score=48.51 Aligned_cols=81 Identities=23% Similarity=0.299 Sum_probs=52.6
Q ss_pred CEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchh--HHHH------HHcCceecCCCcCC---HhhhhccC
Q 012479 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS--FAEA------RAAGFTEENGTLGD---IYETISGS 179 (462)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s--~~~A------~~~G~~~~d~~~~~---~~eav~~A 179 (462)
++|.|+|. |.+|.++++.|.+. |++|++..|..+.. .+.+ ...|+........+ ..++++++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~------g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~ 78 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDL------GHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNV 78 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHT------TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC------CCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCC
Confidence 78999996 99999999999998 88887777753221 1111 23455321111233 44678899
Q ss_pred CeEEEeecch---hHHHHHHHH
Q 012479 180 DLVLLLISDA---AQADNYEKI 198 (462)
Q Consensus 180 DvViLavpd~---a~~~vl~eI 198 (462)
|+||.+.... .+..+++..
T Consensus 79 d~vi~~a~~~~~~~~~~l~~aa 100 (308)
T 1qyc_A 79 DVVISTVGSLQIESQVNIIKAI 100 (308)
T ss_dssp SEEEECCCGGGSGGGHHHHHHH
T ss_pred CEEEECCcchhhhhHHHHHHHH
Confidence 9999998753 334455543
No 347
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=93.90 E-value=0.085 Score=53.13 Aligned_cols=89 Identities=13% Similarity=0.099 Sum_probs=52.1
Q ss_pred CEEEEEcccchHHHHHHHHHHh---hhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecc
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDS---LAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds---~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd 188 (462)
.+|||||+|.+|..++..|++. +...|.+++++...+++.. ++ .++.. .....|.++++ +.|+|+.|+|.
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~---~~--~~~~~-~~~~~d~~~ll-~iDvVve~t~~ 76 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPR---KP--RAIPQ-ELLRAEPFDLL-EADLVVEAMGG 76 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTT---SC--CSSCG-GGEESSCCCCT-TCSEEEECCCC
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHH---Hh--hccCc-ccccCCHHHHh-CCCEEEECCCC
Confidence 5799999999999999999875 1111113444333333211 11 12211 11145777878 99999999997
Q ss_pred hhH-HHHHHHHHhcCCCCcEEEE
Q 012479 189 AAQ-ADNYEKIFSCMKPNSILGL 210 (462)
Q Consensus 189 ~a~-~~vl~eI~~~Lk~gaiL~~ 210 (462)
..+ .+...+ .|+.|+.|+.
T Consensus 77 ~~~a~~~~~~---AL~aGKhVVt 96 (332)
T 2ejw_A 77 VEAPLRLVLP---ALEAGIPLIT 96 (332)
T ss_dssp SHHHHHHHHH---HHHTTCCEEE
T ss_pred cHHHHHHHHH---HHHcCCeEEE
Confidence 643 334433 3456665443
No 348
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.88 E-value=0.31 Score=48.64 Aligned_cols=92 Identities=18% Similarity=0.245 Sum_probs=60.1
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHHcCceec-CCCc--CCHhhhhc-----cC
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~-d~~~--~~~~eav~-----~A 179 (462)
.| .+|.|+|.|.+|...++-++.. |. +|++ ...+++..+.+++.|.... |... .+..+.+. ..
T Consensus 195 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~-~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~ 266 (376)
T 1e3i_A 195 PG-STCAVFGLGCVGLSAIIGCKIA------GASRIIA-IDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGV 266 (376)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEE-ECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEE-EcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCc
Confidence 46 8999999999999999999888 87 5654 4444556788888886420 1000 12333332 47
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCC-cEEEEe
Q 012479 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGLS 211 (462)
Q Consensus 180 DvViLavpd~a~~~vl~eI~~~Lk~g-aiL~~a 211 (462)
|+||-++... +.+++....++++ -.++..
T Consensus 267 Dvvid~~G~~---~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 267 DYSLDCAGTA---QTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp SEEEESSCCH---HHHHHHHHTBCTTTCEEEEC
T ss_pred cEEEECCCCH---HHHHHHHHHhhcCCCEEEEE
Confidence 9999988742 2345555677776 555443
No 349
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=93.86 E-value=0.33 Score=47.47 Aligned_cols=95 Identities=17% Similarity=0.115 Sum_probs=62.2
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceec-CCCcCCHhhhh------ccCC
Q 012479 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (462)
Q Consensus 108 l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~eav------~~AD 180 (462)
.+| ++|.|+|.|.+|...++-++.. |..+++..+.+++..+.+++.|.... +....+..+.+ ...|
T Consensus 159 ~~g-~~VlV~GaG~vG~~aiq~ak~~------G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d 231 (346)
T 4a2c_A 159 CEN-KNVIIIGAGTIGLLAIQCAVAL------GAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQ 231 (346)
T ss_dssp CTT-SEEEEECCSHHHHHHHHHHHHT------TCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSE
T ss_pred CCC-CEEEEECCCCcchHHHHHHHHc------CCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCcc
Confidence 457 8999999999999999999888 87666666665666889999996421 11112233322 3468
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 181 vViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
+|+-++... ..++.....++++-.++..+
T Consensus 232 ~v~d~~G~~---~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 232 LILETAGVP---QTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp EEEECSCSH---HHHHHHHHHCCTTCEEEECC
T ss_pred ccccccccc---chhhhhhheecCCeEEEEEe
Confidence 888777532 23444445667776665443
No 350
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=93.86 E-value=0.31 Score=43.96 Aligned_cols=70 Identities=20% Similarity=0.119 Sum_probs=46.3
Q ss_pred CEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCC-HhhhhccCCeEEEeecc
Q 012479 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD-IYETISGSDLVLLLISD 188 (462)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~-~~eav~~ADvViLavpd 188 (462)
|||.|+|. |.+|.++++.|.+. |.+|++..|...+ .......++......+.+ ..++++++|+||.+...
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR------GHEVLAVVRDPQK-AADRLGATVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCHHH-HHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC------CCEEEEEEecccc-cccccCCCceEEecccccccHhhcccCCEEEECCcc
Confidence 57999997 99999999999999 9998877775333 222222343221000111 11678899999998854
No 351
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=93.85 E-value=0.084 Score=52.85 Aligned_cols=93 Identities=12% Similarity=0.065 Sum_probs=52.8
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhh--hcCCcEEEE-EecCCchh--------HHHHH-HcCceecCCCcC---CHhhhh
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAE--AKSDIVVKV-GLRKGSRS--------FAEAR-AAGFTEENGTLG---DIYETI 176 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~--~g~G~~Viv-g~r~~~~s--------~~~A~-~~G~~~~d~~~~---~~~eav 176 (462)
.+|||||+|.+|..++..|.+.-+. .|.+++++. .+++..+. +.... ..++.. ... +.++++
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~ll 83 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDS---LEYESISASEAL 83 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGG---CCSEECCHHHHH
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCccc---ccCCCCCHHHHh
Confidence 5799999999999999999875110 111244433 33332211 11111 123210 023 777776
Q ss_pred -ccCCeEEEeecch----hHHHHHHHHHhcCCCCcEEEE
Q 012479 177 -SGSDLVLLLISDA----AQADNYEKIFSCMKPNSILGL 210 (462)
Q Consensus 177 -~~ADvViLavpd~----a~~~vl~eI~~~Lk~gaiL~~ 210 (462)
.+.|+|+.++|.. .+.+++.+ .|+.|+.|+.
T Consensus 84 ~~~iDvVv~~t~~~~~~~~~~~~~~~---AL~aGkhVvt 119 (331)
T 3c8m_A 84 ARDFDIVVDATPASADGKKELAFYKE---TFENGKDVVT 119 (331)
T ss_dssp HSSCSEEEECSCCCSSSHHHHHHHHH---HHHTTCEEEE
T ss_pred CCCCCEEEECCCCCCccchHHHHHHH---HHHCCCeEEe
Confidence 4689999999985 44445443 3456776554
No 352
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=93.79 E-value=0.084 Score=52.84 Aligned_cols=67 Identities=18% Similarity=0.229 Sum_probs=48.2
Q ss_pred ccCCCCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCC----chhHHHHHHcC--ceecCCCcCCHhhhhccC
Q 012479 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAEARAAG--FTEENGTLGDIYETISGS 179 (462)
Q Consensus 107 ~l~gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~----~~s~~~A~~~G--~~~~d~~~~~~~eav~~A 179 (462)
.|+| .||++||= +++..|++..+..- |.++.+..... .... +++.| +.. +.+++|++++|
T Consensus 151 ~l~g-lkva~vGD~~~va~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~--~~~~g~~v~~----~~d~~eav~~a 217 (309)
T 4f2g_A 151 PIRG-KTVAWVGDANNMLYTWIQAARIL------DFKLQLSTPPGYALDAKLV--DAESAPFYQV----FDDPNEACKGA 217 (309)
T ss_dssp CCTT-CEEEEESCCCHHHHHHHHHHHHH------TCEEEEECCGGGCCCGGGS--CGGGGGGEEE----CSSHHHHTTTC
T ss_pred CCCC-CEEEEECCCcchHHHHHHHHHHc------CCEEEEECCcccCCCHHHH--HHHcCCeEEE----EcCHHHHhcCC
Confidence 4789 99999994 58999999999887 88877764321 1111 22333 333 57899999999
Q ss_pred CeEEEee
Q 012479 180 DLVLLLI 186 (462)
Q Consensus 180 DvViLav 186 (462)
|+|+..+
T Consensus 218 Dvvyt~~ 224 (309)
T 4f2g_A 218 DLVTTDV 224 (309)
T ss_dssp SEEEECC
T ss_pred CEEEecc
Confidence 9999854
No 353
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=93.79 E-value=0.32 Score=48.50 Aligned_cols=92 Identities=22% Similarity=0.293 Sum_probs=59.8
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHHcCceec-CCCc--CCHhhhhc-----cC
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~-d~~~--~~~~eav~-----~A 179 (462)
.| .+|.|+|.|.+|...++-++.. |. +|++. ..+++..+.+++.|.... |... .+..+.+. ..
T Consensus 191 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~~Vi~~-~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~ 262 (374)
T 2jhf_A 191 QG-STCAVFGLGGVGLSVIMGCKAA------GAARIIGV-DINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGV 262 (374)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEE-CSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEEE-cCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCC
Confidence 46 8999999999999999999988 87 56544 444556788888886320 1000 12333332 47
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCC-cEEEEe
Q 012479 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGLS 211 (462)
Q Consensus 180 DvViLavpd~a~~~vl~eI~~~Lk~g-aiL~~a 211 (462)
|+||-++... +.+++....++++ -.++..
T Consensus 263 D~vid~~g~~---~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 263 DFSFEVIGRL---DTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp SEEEECSCCH---HHHHHHHHHBCTTTCEEEEC
T ss_pred cEEEECCCCH---HHHHHHHHHhhcCCcEEEEe
Confidence 9999998752 2344555567776 555444
No 354
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=93.78 E-value=0.094 Score=52.27 Aligned_cols=93 Identities=17% Similarity=0.210 Sum_probs=61.1
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCc--hhHHHHHHcCceecCCCcCCHhhhh----ccCC
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS--RSFAEARAAGFTEENGTLGDIYETI----SGSD 180 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~--~s~~~A~~~G~~~~d~~~~~~~eav----~~AD 180 (462)
.++| ++|.|+|.|.+|...++.++.. |.+|++..+... +..+.+++.|....| .. +..+.+ ...|
T Consensus 178 ~~~g-~~VlV~GaG~vG~~~~q~a~~~------Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~-~~-~~~~~~~~~~~~~d 248 (366)
T 2cdc_A 178 TLNC-RKVLVVGTGPIGVLFTLLFRTY------GLEVWMANRREPTEVEQTVIEETKTNYYN-SS-NGYDKLKDSVGKFD 248 (366)
T ss_dssp SSTT-CEEEEESCHHHHHHHHHHHHHH------TCEEEEEESSCCCHHHHHHHHHHTCEEEE-CT-TCSHHHHHHHCCEE
T ss_pred cCCC-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCccchHHHHHHHHhCCceec-hH-HHHHHHHHhCCCCC
Confidence 4568 9999999999999999999988 888776666540 345777788875311 11 222222 3479
Q ss_pred eEEEeecchhHHHHH-HHHHhcCCCCcEEEEe
Q 012479 181 LVLLLISDAAQADNY-EKIFSCMKPNSILGLS 211 (462)
Q Consensus 181 vViLavpd~a~~~vl-~eI~~~Lk~gaiL~~a 211 (462)
+||-++.... .+ +...+.|+++-.++..
T Consensus 249 ~vid~~g~~~---~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 249 VIIDATGADV---NILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp EEEECCCCCT---HHHHHHGGGEEEEEEEEEC
T ss_pred EEEECCCChH---HHHHHHHHHHhcCCEEEEE
Confidence 9998887532 23 4555666665544433
No 355
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=93.77 E-value=0.1 Score=51.56 Aligned_cols=90 Identities=19% Similarity=0.232 Sum_probs=62.6
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecc
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd 188 (462)
+| .+|.|+|.|.+|...++-++.. |.+|++..+. ++..+.+++.|.... ..+.++..+..|+||-++..
T Consensus 176 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~v---~~~~~~~~~~~D~vid~~g~ 244 (348)
T 3two_A 176 KG-TKVGVAGFGGLGSMAVKYAVAM------GAEVSVFARN-EHKKQDALSMGVKHF---YTDPKQCKEELDFIISTIPT 244 (348)
T ss_dssp TT-CEEEEESCSHHHHHHHHHHHHT------TCEEEEECSS-STTHHHHHHTTCSEE---ESSGGGCCSCEEEEEECCCS
T ss_pred CC-CEEEEECCcHHHHHHHHHHHHC------CCeEEEEeCC-HHHHHHHHhcCCCee---cCCHHHHhcCCCEEEECCCc
Confidence 57 8999999999999999999988 8887655444 455788888887531 22333333478999999886
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEec
Q 012479 189 AAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 189 ~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
.. .++.....++++-.++..+
T Consensus 245 ~~---~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 245 HY---DLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp CC---CHHHHHTTEEEEEEEEECC
T ss_pred HH---HHHHHHHHHhcCCEEEEEC
Confidence 52 2334455667766655443
No 356
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=93.76 E-value=0.35 Score=48.15 Aligned_cols=92 Identities=18% Similarity=0.239 Sum_probs=60.3
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHHcCceec-CCCc--CCHhhhhc-----cC
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~-d~~~--~~~~eav~-----~A 179 (462)
.| .+|.|+|.|.+|...++-++.. |. +|++ ...+++..+.+++.|.... +... .+..+.++ ..
T Consensus 192 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~~Vi~-~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~ 263 (374)
T 1cdo_A 192 PG-STCAVFGLGAVGLAAVMGCHSA------GAKRIIA-VDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGV 263 (374)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEE-ECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEE-EcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCC
Confidence 46 8999999999999999999988 87 5654 4444556788888886320 1000 12333332 47
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCC-cEEEEe
Q 012479 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGLS 211 (462)
Q Consensus 180 DvViLavpd~a~~~vl~eI~~~Lk~g-aiL~~a 211 (462)
|+||-++... +.++.....++++ -.++..
T Consensus 264 D~vid~~g~~---~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 264 DFSLECVGNV---GVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp SEEEECSCCH---HHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCCH---HHHHHHHHHhhcCCcEEEEE
Confidence 9999988752 2345556677776 555443
No 357
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=93.74 E-value=0.16 Score=50.99 Aligned_cols=70 Identities=16% Similarity=0.185 Sum_probs=48.9
Q ss_pred cccCCCCEEEEEccc-chHHHHHHHHHHhhhhhcCCcEEEEEecCC----chhHHH----HHHcC--ceecCCCcCCHhh
Q 012479 106 DAFNGINQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAE----ARAAG--FTEENGTLGDIYE 174 (462)
Q Consensus 106 ~~l~gikkIgIIG~G-~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~----~~s~~~----A~~~G--~~~~d~~~~~~~e 174 (462)
..|+| .||++||=| ++.+|++..+..- |.++.+..... ....+. |++.| +.. +.+++|
T Consensus 151 g~l~g-l~va~vGD~~~va~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~----~~d~~e 219 (321)
T 1oth_A 151 SSLKG-LTLSWIGDGNNILHSIMMSAAKF------GMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLL----TNDPLE 219 (321)
T ss_dssp SCCTT-CEEEEESCSSHHHHHHHTTTGGG------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEE----ESCHHH
T ss_pred CCcCC-cEEEEECCchhhHHHHHHHHHHc------CCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEE----EECHHH
Confidence 35788 999999986 4777777777666 88887765432 222232 33455 333 578999
Q ss_pred hhccCCeEEEee
Q 012479 175 TISGSDLVLLLI 186 (462)
Q Consensus 175 av~~ADvViLav 186 (462)
++++||+|+.-+
T Consensus 220 av~~aDvvy~d~ 231 (321)
T 1oth_A 220 AAHGGNVLITDT 231 (321)
T ss_dssp HHTTCSEEEECC
T ss_pred HhccCCEEEEec
Confidence 999999999965
No 358
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=93.69 E-value=0.24 Score=43.85 Aligned_cols=70 Identities=21% Similarity=0.289 Sum_probs=46.7
Q ss_pred CEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCC---HhhhhccCCeEEEeec
Q 012479 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~---~~eav~~ADvViLavp 187 (462)
|+|.|+|. |.+|.++++.|.+. |++|++..|+..+... ....++......+.+ ..++++++|+||.+..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~------g~~V~~~~r~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~ 76 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA------GYEVTVLVRDSSRLPS-EGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLG 76 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT------TCEEEEEESCGGGSCS-SSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC------CCeEEEEEeChhhccc-ccCCceEEEEecCCCHHHHHHHHcCCCEEEECcc
Confidence 78999997 99999999999998 9988877775432211 001232211111223 4467888999999876
Q ss_pred c
Q 012479 188 D 188 (462)
Q Consensus 188 d 188 (462)
.
T Consensus 77 ~ 77 (206)
T 1hdo_A 77 T 77 (206)
T ss_dssp C
T ss_pred C
Confidence 4
No 359
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=93.64 E-value=0.16 Score=51.45 Aligned_cols=69 Identities=12% Similarity=0.143 Sum_probs=50.6
Q ss_pred ccCCCCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecC----CchhHHH----HHHcCc--eecCCCcCCHhhh
Q 012479 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFAE----ARAAGF--TEENGTLGDIYET 175 (462)
Q Consensus 107 ~l~gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~----~~~s~~~----A~~~G~--~~~d~~~~~~~ea 175 (462)
.|+| .||++||= +++..|++..+..- |.++.+...+ ++...+. |++.|. .. +.+++|+
T Consensus 176 ~l~g-lkva~vGD~~nva~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~----~~d~~ea 244 (340)
T 4ep1_A 176 TFKG-IKLAYVGDGNNVCHSLLLASAKV------GMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEI----LHNPELA 244 (340)
T ss_dssp CCTT-CEEEEESCCCHHHHHHHHHHHHH------TCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEE----ESCHHHH
T ss_pred CCCC-CEEEEECCCchhHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEE----ECCHHHH
Confidence 4788 99999995 58899999999887 8888776443 2222223 345663 33 5789999
Q ss_pred hccCCeEEEee
Q 012479 176 ISGSDLVLLLI 186 (462)
Q Consensus 176 v~~ADvViLav 186 (462)
+++||+|+..+
T Consensus 245 v~~aDVvyt~~ 255 (340)
T 4ep1_A 245 VNEADFIYTDV 255 (340)
T ss_dssp HTTCSEEEECC
T ss_pred hCCCCEEEecC
Confidence 99999999865
No 360
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=93.63 E-value=0.19 Score=45.57 Aligned_cols=69 Identities=16% Similarity=0.196 Sum_probs=47.3
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCC----HhhhhccCCeEEEee
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD----IYETISGSDLVLLLI 186 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~----~~eav~~ADvViLav 186 (462)
|||.|+| .|.+|.++++.|.+. |++|++..|..++..+. .++......+.+ ..+++++.|+||.+.
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~a 71 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT------DYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEMAKQLHGMDAIINVS 71 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS------SCEEEEEESSGGGSCCC---TTEEEEECCTTSCHHHHHTTTTTCSEEEECC
T ss_pred CeEEEECCCCHHHHHHHHHHHHC------CCEEEEEECCccchhhc---CCceEEEecccCCHHHHHHHHcCCCEEEECC
Confidence 5899999 899999999999998 99988877764432111 232211111233 445788899999988
Q ss_pred cch
Q 012479 187 SDA 189 (462)
Q Consensus 187 pd~ 189 (462)
...
T Consensus 72 g~~ 74 (219)
T 3dqp_A 72 GSG 74 (219)
T ss_dssp CCT
T ss_pred cCC
Confidence 753
No 361
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=93.61 E-value=0.34 Score=48.18 Aligned_cols=92 Identities=20% Similarity=0.196 Sum_probs=60.3
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHHcCceec-CCCc--CCHhhhhc-----cC
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~-d~~~--~~~~eav~-----~A 179 (462)
.| .+|.|+|.|.+|...++-++.. |. +|++ ...+++..+.+++.|.... +... .+..+.++ ..
T Consensus 190 ~g-~~VlV~GaG~vG~~avqla~~~------Ga~~Vi~-~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~ 261 (373)
T 2fzw_A 190 PG-SVCAVFGLGGVGLAVIMGCKVA------GASRIIG-VDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGV 261 (373)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEE-ECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEE-EcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCC
Confidence 46 8999999999999999999988 87 5654 4444556788888886320 1000 12333332 47
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCC-cEEEEe
Q 012479 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGLS 211 (462)
Q Consensus 180 DvViLavpd~a~~~vl~eI~~~Lk~g-aiL~~a 211 (462)
|+||-++... +.+++....++++ -.++..
T Consensus 262 D~vid~~g~~---~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 262 DYSFECIGNV---KVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp SEEEECSCCH---HHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCcH---HHHHHHHHhhccCCcEEEEE
Confidence 9999998752 2345556677776 555544
No 362
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=93.60 E-value=0.33 Score=46.49 Aligned_cols=75 Identities=21% Similarity=0.161 Sum_probs=48.9
Q ss_pred cccCCCCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHH------cCce---ecCCC-cCCHhh
Q 012479 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA------AGFT---EENGT-LGDIYE 174 (462)
Q Consensus 106 ~~l~gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~------~G~~---~~d~~-~~~~~e 174 (462)
..++| |+|.|.|. |-+|.++++.|.+. |++|++..|...+....... .++. ..|-+ ..+..+
T Consensus 7 ~~~~~-~~vlVTGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~ 79 (342)
T 1y1p_A 7 VLPEG-SLVLVTGANGFVASHVVEQLLEH------GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDE 79 (342)
T ss_dssp SSCTT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTT
T ss_pred cCCCC-CEEEEECCccHHHHHHHHHHHHC------CCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHH
Confidence 45678 99999997 99999999999998 99888777753322111111 1221 11111 123456
Q ss_pred hhccCCeEEEeec
Q 012479 175 TISGSDLVLLLIS 187 (462)
Q Consensus 175 av~~ADvViLavp 187 (462)
++++.|+||.+..
T Consensus 80 ~~~~~d~vih~A~ 92 (342)
T 1y1p_A 80 VIKGAAGVAHIAS 92 (342)
T ss_dssp TTTTCSEEEECCC
T ss_pred HHcCCCEEEEeCC
Confidence 6778999998764
No 363
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=93.57 E-value=0.16 Score=51.90 Aligned_cols=71 Identities=15% Similarity=0.155 Sum_probs=52.8
Q ss_pred cccCCCCEEEEEccc--chHHHHHHHHHHhhhhhcCCcEEEEEecC----CchhHH----HHHHcC--ceecCCCcCCHh
Q 012479 106 DAFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFA----EARAAG--FTEENGTLGDIY 173 (462)
Q Consensus 106 ~~l~gikkIgIIG~G--~mG~AiA~~Lrds~~~~g~G~~Vivg~r~----~~~s~~----~A~~~G--~~~~d~~~~~~~ 173 (462)
..|+| .||++||=| +++.|++..+..- |.+|.+.... ++...+ .|++.| +.. +.+++
T Consensus 172 g~l~g-l~va~vGD~~~rva~Sl~~~~~~l------G~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~----~~d~~ 240 (359)
T 2w37_A 172 GKLQG-LTLTFMGDGRNNVANSLLVTGAIL------GVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVI----TDDLD 240 (359)
T ss_dssp SCCTT-CEEEEESCTTSHHHHHHHHHHHHH------TCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEE----ESCHH
T ss_pred CCcCC-eEEEEECCCccchHHHHHHHHHHc------CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEE----EeCHH
Confidence 35788 999999986 9999999999888 9888776543 222222 333667 433 57899
Q ss_pred hhhccCCeEEEeec
Q 012479 174 ETISGSDLVLLLIS 187 (462)
Q Consensus 174 eav~~ADvViLavp 187 (462)
|++++||+|+..+=
T Consensus 241 eav~~aDvvytd~w 254 (359)
T 2w37_A 241 EGLKGSNVVYTDVW 254 (359)
T ss_dssp HHHTTCSEEEECCS
T ss_pred HHhcCCCEEEEccc
Confidence 99999999998654
No 364
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.55 E-value=0.18 Score=50.54 Aligned_cols=93 Identities=20% Similarity=0.226 Sum_probs=61.8
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHHcCceec-CCCcCCHhhhhc--------c
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS--------G 178 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~eav~--------~ 178 (462)
.| .+|.|+|.|.+|...++-++.. |. +|+ ..+.+++..+.+++.|.... +....+..+.+. .
T Consensus 182 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi-~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg 253 (370)
T 4ej6_A 182 AG-STVAILGGGVIGLLTVQLARLA------GATTVI-LSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGG 253 (370)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEE-EECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTC
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEE-EECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCC
Confidence 57 8999999999999999999888 88 554 45555666788888887421 111224444444 3
Q ss_pred CCeEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 179 ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
.|+||-++... +.+++....++++-.++..+
T Consensus 254 ~Dvvid~~G~~---~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 254 VDVVIECAGVA---ETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp EEEEEECSCCH---HHHHHHHHHEEEEEEEEECS
T ss_pred CCEEEECCCCH---HHHHHHHHHhccCCEEEEEe
Confidence 79999988742 23444445566666555443
No 365
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=93.53 E-value=0.24 Score=49.30 Aligned_cols=71 Identities=23% Similarity=0.170 Sum_probs=42.1
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHH--cC-c--eecCCC-cCCHhhhhccCCeEEE
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA--AG-F--TEENGT-LGDIYETISGSDLVLL 184 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~--~G-~--~~~d~~-~~~~~eav~~ADvViL 184 (462)
+||+||| .|.+|.+++..|.... +...++++.+.. .+....+.+ .. . .. ... ..+..+++++||+||+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~---~~~~el~L~Di~-~~~~G~a~Dl~~~~~~~~v-~~~~~~~~~~~~~~aDivii 75 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQL---PSGSELSLYDIA-PVTPGVAVDLSHIPTAVKI-KGFSGEDATPALEGADVVLI 75 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHS---CTTEEEEEECSS-TTHHHHHHHHHTSCSSEEE-EEECSSCCHHHHTTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC---CCCceEEEEecC-CCchhHHHHhhCCCCCceE-EEecCCCcHHHhCCCCEEEE
Confidence 6899999 8999999999987530 012355444443 222222222 11 1 11 000 0245678999999999
Q ss_pred eec
Q 012479 185 LIS 187 (462)
Q Consensus 185 avp 187 (462)
+..
T Consensus 76 ~ag 78 (312)
T 3hhp_A 76 SAG 78 (312)
T ss_dssp CCS
T ss_pred eCC
Confidence 873
No 366
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=93.53 E-value=0.21 Score=47.92 Aligned_cols=81 Identities=20% Similarity=0.148 Sum_probs=53.1
Q ss_pred CEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHH---HHHcCceecCCCcCC---HhhhhccCCeEEE
Q 012479 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAE---ARAAGFTEENGTLGD---IYETISGSDLVLL 184 (462)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~---A~~~G~~~~d~~~~~---~~eav~~ADvViL 184 (462)
++|.|+|. |.+|.++++.|.+. |++|++..|+.+...+. ....|+........+ +.++++++|+||.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~------g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~ 85 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKL------GHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVIS 85 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHT------TCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred CeEEEECCCchHHHHHHHHHHHC------CCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 58999995 99999999999998 88888777764322221 123455321111233 4567889999999
Q ss_pred eecch---hHHHHHHHH
Q 012479 185 LISDA---AQADNYEKI 198 (462)
Q Consensus 185 avpd~---a~~~vl~eI 198 (462)
+.... .+..+++..
T Consensus 86 ~a~~~~~~~~~~l~~aa 102 (318)
T 2r6j_A 86 ALAFPQILDQFKILEAI 102 (318)
T ss_dssp CCCGGGSTTHHHHHHHH
T ss_pred CCchhhhHHHHHHHHHH
Confidence 98753 334455443
No 367
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=93.51 E-value=0.092 Score=53.04 Aligned_cols=95 Identities=18% Similarity=0.228 Sum_probs=61.4
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHHcCceecCCCcCCH-hhhhc------cCC
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDI-YETIS------GSD 180 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~-~eav~------~AD 180 (462)
.| .+|.|+|.|.+|...++-++.. |. +|++..+ +.+..+.+++.|....+-...+. .+.++ ..|
T Consensus 185 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~-~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~D 256 (398)
T 2dph_A 185 PG-SHVYIAGAGPVGRCAAAGARLL------GAACVIVGDQ-NPERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVD 256 (398)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEEES-CHHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEEcC-CHHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCC
Confidence 56 8999999999999999999888 87 6655444 45557888888874211111222 23222 579
Q ss_pred eEEEeecchh-----------HHHHHHHHHhcCCCCcEEEEe
Q 012479 181 LVLLLISDAA-----------QADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 181 vViLavpd~a-----------~~~vl~eI~~~Lk~gaiL~~a 211 (462)
+||-++.... -...+++....++++-.++..
T Consensus 257 vvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 257 CGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp EEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred EEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 9999987542 112455555667776655544
No 368
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.46 E-value=0.28 Score=49.04 Aligned_cols=93 Identities=19% Similarity=0.285 Sum_probs=61.2
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHHcCceec-CCC--cCCHhhhhc-----cC
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGT--LGDIYETIS-----GS 179 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~-d~~--~~~~~eav~-----~A 179 (462)
+| .+|.|+|.|.+|...++-++.. |. +|++ .+.+++..+.+++.|.... +.. ..+..+.++ ..
T Consensus 193 ~g-~~VlV~GaG~vG~~a~q~a~~~------Ga~~Vi~-~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~ 264 (378)
T 3uko_A 193 PG-SNVAIFGLGTVGLAVAEGAKTA------GASRIIG-IDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGV 264 (378)
T ss_dssp TT-CCEEEECCSHHHHHHHHHHHHH------TCSCEEE-ECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEE-EcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCC
Confidence 46 8999999999999999999988 88 5654 4444556788999887420 100 122333332 47
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCC-cEEEEec
Q 012479 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGLSH 212 (462)
Q Consensus 180 DvViLavpd~a~~~vl~eI~~~Lk~g-aiL~~a~ 212 (462)
|+||-++... +.++.....+++| -.++..+
T Consensus 265 D~vid~~g~~---~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 265 DYSFECIGNV---SVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp SEEEECSCCH---HHHHHHHHTBCTTTCEEEECS
T ss_pred CEEEECCCCH---HHHHHHHHHhhccCCEEEEEc
Confidence 9999988853 3345555677774 5554443
No 369
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=93.46 E-value=0.14 Score=50.60 Aligned_cols=93 Identities=18% Similarity=0.172 Sum_probs=61.1
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHHcCcee-cCCCcCCHhhhhc------cCC
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTE-ENGTLGDIYETIS------GSD 180 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~-~d~~~~~~~eav~------~AD 180 (462)
+| ++|.|+|.|.+|.+.++-++.. |. +|++..++ ++..+.+++.|... .+....+..+.+. ..|
T Consensus 167 ~g-~~VlV~GaG~vG~~~~q~a~~~------Ga~~Vi~~~~~-~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D 238 (348)
T 2d8a_A 167 SG-KSVLITGAGPLGLLGIAVAKAS------GAYPVIVSEPS-DFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVD 238 (348)
T ss_dssp TT-CCEEEECCSHHHHHHHHHHHHT------TCCSEEEECSC-HHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEECCC-HHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCC
Confidence 78 9999999999999999999988 88 77655544 55577788888631 0111123333332 579
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 181 vViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
+||-++... +.+++..+.++++-.++..+
T Consensus 239 ~vid~~g~~---~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 239 VFLEFSGAP---KALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp EEEECSCCH---HHHHHHHHHEEEEEEEEECC
T ss_pred EEEECCCCH---HHHHHHHHHHhcCCEEEEEc
Confidence 999998752 23444455566665555443
No 370
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=93.46 E-value=0.2 Score=50.36 Aligned_cols=69 Identities=14% Similarity=0.205 Sum_probs=50.3
Q ss_pred ccCCCCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecC----CchhHHH----HHHcC--ceecCCCcCCHhhh
Q 012479 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFAE----ARAAG--FTEENGTLGDIYET 175 (462)
Q Consensus 107 ~l~gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~----~~~s~~~----A~~~G--~~~~d~~~~~~~ea 175 (462)
.|+| .||++||= +++..|++..+..- |.++.+.... +....+. +++.| +.. +.+++|+
T Consensus 154 ~l~g-lkva~vGD~~rva~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~----~~d~~ea 222 (323)
T 3gd5_A 154 RLAG-LKLAYVGDGNNVAHSLLLGCAKV------GMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQI----LRDPFEA 222 (323)
T ss_dssp CCTT-CEEEEESCCCHHHHHHHHHHHHH------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEE----ESCHHHH
T ss_pred CCCC-CEEEEECCCCcHHHHHHHHHHHc------CCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEE----ECCHHHH
Confidence 4788 99999995 68999999999877 8888776443 2222333 33446 333 5789999
Q ss_pred hccCCeEEEee
Q 012479 176 ISGSDLVLLLI 186 (462)
Q Consensus 176 v~~ADvViLav 186 (462)
+++||+|+..+
T Consensus 223 v~~aDvvyt~~ 233 (323)
T 3gd5_A 223 ARGAHILYTDV 233 (323)
T ss_dssp HTTCSEEEECC
T ss_pred hcCCCEEEEec
Confidence 99999998775
No 371
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=93.45 E-value=0.12 Score=51.67 Aligned_cols=73 Identities=16% Similarity=0.146 Sum_probs=54.3
Q ss_pred cccCCCCEEEEEccc---chHHHHHHHHHHhhhhhcCCcEEEEEecC----CchhHHHHHHcCceecCCCcCCHhhhhcc
Q 012479 106 DAFNGINQIGVIGWG---SQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFAEARAAGFTEENGTLGDIYETISG 178 (462)
Q Consensus 106 ~~l~gikkIgIIG~G---~mG~AiA~~Lrds~~~~g~G~~Vivg~r~----~~~s~~~A~~~G~~~~d~~~~~~~eav~~ 178 (462)
..|+| .||++||=| ++.+|++..+..- |.++.+.... +....+.+++.|.... .+.+++|++++
T Consensus 151 g~l~g-l~va~vGD~~~~rva~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~--~~~d~~eav~~ 221 (308)
T 1ml4_A 151 GRIDG-LKIGLLGDLKYGRTVHSLAEALTFY------DVELYLISPELLRMPRHIVEELREKGMKVV--ETTTLEDVIGK 221 (308)
T ss_dssp SCSSS-EEEEEESCTTTCHHHHHHHHHGGGS------CEEEEEECCGGGCCCHHHHHHHHHTTCCEE--EESCTHHHHTT
T ss_pred CCCCC-eEEEEeCCCCcCchHHHHHHHHHHC------CCEEEEECCccccCCHHHHHHHHHcCCeEE--EEcCHHHHhcC
Confidence 35788 899999974 8999999999887 9888776543 2234466667775310 14689999999
Q ss_pred CCeEEEeec
Q 012479 179 SDLVLLLIS 187 (462)
Q Consensus 179 ADvViLavp 187 (462)
||+|+...=
T Consensus 222 aDvvyt~~~ 230 (308)
T 1ml4_A 222 LDVLYVTRI 230 (308)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCc
Confidence 999998663
No 372
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=93.40 E-value=0.2 Score=52.41 Aligned_cols=68 Identities=15% Similarity=0.127 Sum_probs=48.9
Q ss_pred CCCCEEEEEcccchHHH-HHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEe
Q 012479 109 NGINQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~A-iA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLa 185 (462)
+.+++|.|||+|-.|.+ +|+-|++. |.+|.+.+...+...+..++.|+....+ .+. +.++++|+||+.
T Consensus 17 ~~~~~v~viGiG~sG~s~~A~~l~~~------G~~V~~~D~~~~~~~~~l~~~gi~~~~g--~~~-~~~~~a~~vv~s 85 (491)
T 2f00_A 17 RRVRHIHFVGIGGAGMGGIAEVLANE------GYQISGSDLAPNPVTQQLMNLGATIYFN--HRP-ENVRDASVVVVS 85 (491)
T ss_dssp TTCCEEEEETTTSTTHHHHHHHHHHT------TCEEEEECSSCCHHHHHHHHTTCEEESS--CCG-GGGTTCSEEEEC
T ss_pred ccCCEEEEEEcCHHHHHHHHHHHHhC------CCeEEEECCCCCHHHHHHHHCCCEEECC--CCH-HHcCCCCEEEEC
Confidence 34589999999999997 99999998 9998877665444344555678765211 122 456789998884
No 373
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=93.39 E-value=0.23 Score=50.04 Aligned_cols=94 Identities=15% Similarity=0.135 Sum_probs=55.1
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecC--CchhHHHHH----HcC-----cee--cCC---------C-
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK--GSRSFAEAR----AAG-----FTE--ENG---------T- 168 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~--~~~s~~~A~----~~G-----~~~--~d~---------~- 168 (462)
.||||+|+|.+|.-+++.|.+. .+++++...+. +........ ..| ... .++ .
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~-----p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v 78 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQS-----EDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTV 78 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-----SSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEE
T ss_pred eEEEEECcCHHHHHHHHHHhCC-----CCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEE
Confidence 4899999999999999998765 14566554442 222222221 112 110 000 0
Q ss_pred c--CCHhhh---hccCCeEEEeecchhHHHHHHHHHhcCCCCc--EEEEecc
Q 012479 169 L--GDIYET---ISGSDLVLLLISDAAQADNYEKIFSCMKPNS--ILGLSHG 213 (462)
Q Consensus 169 ~--~~~~ea---v~~ADvViLavpd~a~~~vl~eI~~~Lk~ga--iL~~a~G 213 (462)
. .+++++ -.++|+||.|+|.....+....+ ++.|. +|+..++
T Consensus 79 ~~~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~---l~aGak~VVIs~pa 127 (337)
T 3e5r_O 79 FGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAH---LKGGAKKVVISAPS 127 (337)
T ss_dssp ECCSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHH---HHTTCSEEEESSCC
T ss_pred EecCChHHccccccCCCEEEECCCchhhHHHHHHH---HHcCCCEEEEecCC
Confidence 1 144443 14799999999999888776654 34565 5554443
No 374
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=93.33 E-value=0.16 Score=50.60 Aligned_cols=93 Identities=12% Similarity=0.102 Sum_probs=59.2
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHHcCceec-CCCcCCHhhhhc-----cCCe
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS-----GSDL 181 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~eav~-----~ADv 181 (462)
.| ++|.|+|.|.+|...++-++.. |. .|++ .+.+++..+.+++.|.... +....+..+.+. ..|+
T Consensus 190 ~g-~~VlV~GaG~vG~~a~qlak~~------Ga~~Vi~-~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~ 261 (371)
T 1f8f_A 190 PA-SSFVTWGAGAVGLSALLAAKVC------GASIIIA-VDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNF 261 (371)
T ss_dssp TT-CEEEEESCSHHHHHHHHHHHHH------TCSEEEE-EESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEE-ECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcE
Confidence 46 8999999999999999998888 87 4544 4444556788888886310 111123333332 4799
Q ss_pred EEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 182 ViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
||-++... +.+++....++++-.++..+
T Consensus 262 vid~~g~~---~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 262 ALESTGSP---EILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp EEECSCCH---HHHHHHHHTEEEEEEEEECC
T ss_pred EEECCCCH---HHHHHHHHHHhcCCEEEEeC
Confidence 99888742 23445555666665555443
No 375
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=93.29 E-value=0.17 Score=50.50 Aligned_cols=76 Identities=14% Similarity=0.191 Sum_probs=58.1
Q ss_pred cccCCCCEEEEEccc-chHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEE
Q 012479 106 DAFNGINQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (462)
Q Consensus 106 ~~l~gikkIgIIG~G-~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViL 184 (462)
..++| |++.|||-+ ..|..+|.-|... +-.|.+.... +.++.+.+++||+||.
T Consensus 175 i~l~G-k~vvViGRS~iVGkPla~LL~~~------~ATVTi~Hs~-------------------T~dl~~~~~~ADIvV~ 228 (303)
T 4b4u_A 175 IEIAG-KHAVVVGRSAILGKPMAMMLLQA------NATVTICHSR-------------------TQNLPELVKQADIIVG 228 (303)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSSHHHHHHTCSEEEE
T ss_pred CCCCC-CEEEEEeccccccchHHHHHHhc------CCEEEEecCC-------------------CCCHHHHhhcCCeEEe
Confidence 46889 999999966 6799999999887 7777765321 3467788999999999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
++.-... +. ...+|+|++|+|++
T Consensus 229 A~G~p~~---i~--~d~vk~GavVIDVG 251 (303)
T 4b4u_A 229 AVGKAEL---IQ--KDWIKQGAVVVDAG 251 (303)
T ss_dssp CSCSTTC---BC--GGGSCTTCEEEECC
T ss_pred ccCCCCc---cc--cccccCCCEEEEec
Confidence 9874322 22 35689999999874
No 376
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=93.25 E-value=0.42 Score=48.32 Aligned_cols=80 Identities=11% Similarity=0.115 Sum_probs=42.7
Q ss_pred ccccCCCCEEEEEcc-cchHHHHHHHHHHhhhhhcCC--cEEEEEecCCchh--HHHHHH--c-Cce--ecCCCcCCHhh
Q 012479 105 PDAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSD--IVVKVGLRKGSRS--FAEARA--A-GFT--EENGTLGDIYE 174 (462)
Q Consensus 105 ~~~l~gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G--~~Vivg~r~~~~s--~~~A~~--~-G~~--~~d~~~~~~~e 174 (462)
+..... -||+|||. |.+|.+++..|.... =.|.+ .++...+...... .-.+.+ + .+. ..-....+..+
T Consensus 19 ~~s~~~-vKVaViGAaG~IG~~la~~la~~~-l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~ 96 (345)
T 4h7p_A 19 PGSMSA-VKVAVTGAAGQIGYALVPLIARGA-LLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPRV 96 (345)
T ss_dssp ---CCC-EEEEEESTTSHHHHHHHHHHHHTT-TTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHH
T ss_pred CCCCCC-CEEEEECcCcHHHHHHHHHHHhcc-ccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChHH
Confidence 445555 69999996 999999999988750 00001 1444433322111 111111 1 110 00001356788
Q ss_pred hhccCCeEEEee
Q 012479 175 TISGSDLVLLLI 186 (462)
Q Consensus 175 av~~ADvViLav 186 (462)
++++||+||++-
T Consensus 97 a~~~advVvi~a 108 (345)
T 4h7p_A 97 AFDGVAIAIMCG 108 (345)
T ss_dssp HTTTCSEEEECC
T ss_pred HhCCCCEEEECC
Confidence 999999999965
No 377
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=93.25 E-value=0.25 Score=46.83 Aligned_cols=81 Identities=19% Similarity=0.174 Sum_probs=52.5
Q ss_pred CEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCC-c-----hhHHH---HHHcCceecCCCcCC---Hhhhhcc
Q 012479 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-S-----RSFAE---ARAAGFTEENGTLGD---IYETISG 178 (462)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~-~-----~s~~~---A~~~G~~~~d~~~~~---~~eav~~ 178 (462)
++|.|+|. |.+|.++++.|.+. |++|++..|.. . ...+. ....|+......+.+ ..+++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~ 76 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKA------GNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQ 76 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHH------TCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTT
T ss_pred cEEEEECCCchHHHHHHHHHHhC------CCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhC
Confidence 88999996 99999999999998 88888777764 1 11111 123455321111233 4567889
Q ss_pred CCeEEEeecch---hHHHHHHHH
Q 012479 179 SDLVLLLISDA---AQADNYEKI 198 (462)
Q Consensus 179 ADvViLavpd~---a~~~vl~eI 198 (462)
+|+||.+.... .+..+++..
T Consensus 77 ~d~vi~~a~~~~~~~~~~l~~aa 99 (307)
T 2gas_A 77 VDIVICAAGRLLIEDQVKIIKAI 99 (307)
T ss_dssp CSEEEECSSSSCGGGHHHHHHHH
T ss_pred CCEEEECCcccccccHHHHHHHH
Confidence 99999988743 334455543
No 378
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=93.23 E-value=0.17 Score=50.97 Aligned_cols=97 Identities=22% Similarity=0.233 Sum_probs=61.3
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCC-Hhhhh------ccCCe
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD-IYETI------SGSDL 181 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~-~~eav------~~ADv 181 (462)
.| .+|.|+|.|.+|...++-++.. |...++..+.+++..+.+++.|....+-...+ ..+.+ ...|+
T Consensus 185 ~g-~~VlV~GaG~vG~~aiqlAk~~------Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t~g~g~Dv 257 (398)
T 1kol_A 185 PG-STVYVAGAGPVGLAAAASARLL------GAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDC 257 (398)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEE
T ss_pred CC-CEEEEECCcHHHHHHHHHHHHC------CCCeEEEEcCCHHHHHHHHHcCCcEEccCCcchHHHHHHHHhCCCCCCE
Confidence 56 8999999999999999998888 87333444444566788888887421111111 23322 24799
Q ss_pred EEEeecchh------------HHHHHHHHHhcCCCCcEEEEec
Q 012479 182 VLLLISDAA------------QADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 182 ViLavpd~a------------~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
||-++.... ....+++....++++-.++..+
T Consensus 258 vid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 258 AVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp EEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred EEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 999987542 1124555556666665555443
No 379
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=93.20 E-value=0.43 Score=47.11 Aligned_cols=92 Identities=14% Similarity=0.090 Sum_probs=60.0
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceec-CCCc-CCH-hh---hh-----c
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTL-GDI-YE---TI-----S 177 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~-~~~-~e---av-----~ 177 (462)
.| ++|.|+|.|.+|...++-++.. |.+|++ .+.+++..+.+++.|.... +... .+. ++ .. .
T Consensus 168 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~Vi~-~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~ 239 (352)
T 1e3j_A 168 LG-TTVLVIGAGPIGLVSVLAAKAY------GAFVVC-TARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGD 239 (352)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCEEEE-EESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSS
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCEEEE-EcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCC
Confidence 57 8999999999999999999888 888654 4444556778888886310 1110 121 11 22 2
Q ss_pred cCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 012479 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 178 ~ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
..|+||-++.... .++.....++++-.++..
T Consensus 240 g~D~vid~~g~~~---~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 240 LPNVTIDCSGNEK---CITIGINITRTGGTLMLV 270 (352)
T ss_dssp CCSEEEECSCCHH---HHHHHHHHSCTTCEEEEC
T ss_pred CCCEEEECCCCHH---HHHHHHHHHhcCCEEEEE
Confidence 5899999987542 344455567776665544
No 380
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.15 E-value=0.19 Score=45.12 Aligned_cols=93 Identities=13% Similarity=0.082 Sum_probs=59.0
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceec-CCCcCCHhhhh------ccCC
Q 012479 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (462)
Q Consensus 109 ~gikkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~eav------~~AD 180 (462)
+| ++|.|+| .|.+|.+.++.++.. |.+|++..++ .+..+.+++.|.... |....+..+.+ ...|
T Consensus 38 ~g-~~vlV~Ga~ggiG~~~~~~~~~~------G~~V~~~~~~-~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D 109 (198)
T 1pqw_A 38 PG-ERVLIHSATGGVGMAAVSIAKMI------GARIYTTAGS-DAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVD 109 (198)
T ss_dssp TT-CEEEETTTTSHHHHHHHHHHHHH------TCEEEEEESS-HHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEE
T ss_pred CC-CEEEEeeCCChHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCe
Confidence 46 8999999 699999999999988 8887666554 444556666664210 11111222222 1478
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 012479 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 181 vViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~G 213 (462)
+||.++.. +.++...+.|+++-.++..+.
T Consensus 110 ~vi~~~g~----~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 110 VVLNSLAG----EAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp EEEECCCT----HHHHHHHHTEEEEEEEEECSC
T ss_pred EEEECCch----HHHHHHHHHhccCCEEEEEcC
Confidence 99988764 345556666777666555543
No 381
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.12 E-value=0.21 Score=49.05 Aligned_cols=92 Identities=17% Similarity=0.190 Sum_probs=60.8
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceec-CCCcCCHhhhhc----cCCeEE
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS----GSDLVL 183 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~eav~----~ADvVi 183 (462)
.| .+|.|+|.|.+|...++-++.. |.+|++..+ +++..+.+++.|.... |....+..+.+. ..|+|+
T Consensus 166 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~Vi~~~~-~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vi 237 (340)
T 3s2e_A 166 PG-QWVVISGIGGLGHVAVQYARAM------GLRVAAVDI-DDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVL 237 (340)
T ss_dssp TT-SEEEEECCSTTHHHHHHHHHHT------TCEEEEEES-CHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHC------CCeEEEEeC-CHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEE
Confidence 56 8999999999999999999988 888765544 4556788888886320 111123333333 578998
Q ss_pred EeecchhHHHHHHHHHhcCCCCcEEEEe
Q 012479 184 LLISDAAQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 184 Lavpd~a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
.++... +.++.....++++-.++..
T Consensus 238 d~~g~~---~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 238 VTAVSP---KAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp ESSCCH---HHHHHHHHHEEEEEEEEEC
T ss_pred EeCCCH---HHHHHHHHHhccCCEEEEe
Confidence 887632 3444555566666655544
No 382
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=93.02 E-value=0.16 Score=53.78 Aligned_cols=85 Identities=16% Similarity=0.148 Sum_probs=53.9
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCC-Hh-hhhccCCeEEEeecch
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD-IY-ETISGSDLVLLLISDA 189 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~-~~-eav~~ADvViLavpd~ 189 (462)
++|.|||+|..|..+|+.|.+. |+++++-+....+ .+.+. -+...|.+-.+ .+ .-+++||.++++++++
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~------g~~v~vid~d~~~-~~~~~--~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d 419 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK------PVPFILIDRQESP-VCNDH--VVVYGDATVGQTLRQAGIDRASGIIVTTNDD 419 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCCS-SCCSS--CEEESCSSSSTHHHHHTTTSCSEEEECCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHC------CCCEEEEECChHH-HhhcC--CEEEeCCCCHHHHHhcCccccCEEEEECCCc
Confidence 6799999999999999999998 9888776654333 22221 23322222111 22 2378999999999987
Q ss_pred hHHHHHHHHHhcCCCC
Q 012479 190 AQADNYEKIFSCMKPN 205 (462)
Q Consensus 190 a~~~vl~eI~~~Lk~g 205 (462)
..--+.-.++..+.+.
T Consensus 420 ~~ni~~~~~ak~l~~~ 435 (565)
T 4gx0_A 420 STNIFLTLACRHLHSH 435 (565)
T ss_dssp HHHHHHHHHHHHHCSS
T ss_pred hHHHHHHHHHHHHCCC
Confidence 4433333344444444
No 383
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=92.97 E-value=0.38 Score=47.66 Aligned_cols=92 Identities=13% Similarity=0.099 Sum_probs=59.6
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHHcCceec-CCC---cCCHhhhh-----cc
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGT---LGDIYETI-----SG 178 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~-d~~---~~~~~eav-----~~ 178 (462)
.| .+|.|+|.|.+|...++-++.. |. +|++.. .+++..+.+++.|.... +.. ..+..+.+ ..
T Consensus 171 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~-~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g 242 (356)
T 1pl8_A 171 LG-HKVLVCGAGPIGMVTLLVAKAM------GAAQVVVTD-LSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCK 242 (356)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEEE-SCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSC
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEEC-CCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCC
Confidence 57 8999999999999999998887 88 665544 44555788888886310 100 00111122 35
Q ss_pred CCeEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 012479 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 179 ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
.|+||-++... ..++.....++++-.++..
T Consensus 243 ~D~vid~~g~~---~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 243 PEVTIECTGAE---ASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp CSEEEECSCCH---HHHHHHHHHSCTTCEEEEC
T ss_pred CCEEEECCCCh---HHHHHHHHHhcCCCEEEEE
Confidence 89999998753 2344445567777665544
No 384
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=92.94 E-value=0.15 Score=51.88 Aligned_cols=90 Identities=12% Similarity=0.095 Sum_probs=55.7
Q ss_pred CCEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecC--CchhHHHHH---HcCceecCCCcCCHhhhhccCCeEEE
Q 012479 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK--GSRSFAEAR---AAGFTEENGTLGDIYETISGSDLVLL 184 (462)
Q Consensus 111 ikkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~--~~~s~~~A~---~~G~~~~d~~~~~~~eav~~ADvViL 184 (462)
|.||+||| .|..|.-+.+-|.+. + .+++...... ..+.....- ....... ..+.++...++|+||+
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~h-P----~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~---~~~~~~~~~~~Dvvf~ 84 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNH-P----EAKITYLSSRTYAGKKLEEIFPSTLENSILS---EFDPEKVSKNCDVLFT 84 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHC-T----TEEEEEEECSTTTTSBHHHHCGGGCCCCBCB---CCCHHHHHHHCSEEEE
T ss_pred eeEEEEECCCCHHHHHHHHHHHcC-C----CcEEEEEeCcccccCChHHhChhhccCceEE---eCCHHHhhcCCCEEEE
Confidence 47899998 699999999988876 1 2344332221 122222110 0112210 1244555578999999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEEEEecc
Q 012479 185 LISDAAQADNYEKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~gaiL~~a~G 213 (462)
|+|.....++.+++ .|..|+|.++
T Consensus 85 alp~~~s~~~~~~~-----~g~~VIDlSs 108 (351)
T 1vkn_A 85 ALPAGASYDLVREL-----KGVKIIDLGA 108 (351)
T ss_dssp CCSTTHHHHHHTTC-----CSCEEEESSS
T ss_pred CCCcHHHHHHHHHh-----CCCEEEECCh
Confidence 99998777665543 6888888877
No 385
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=92.93 E-value=0.3 Score=46.83 Aligned_cols=81 Identities=17% Similarity=0.135 Sum_probs=52.8
Q ss_pred CEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCC-c----hhHHH---HHHcCceecCCCcCC---HhhhhccC
Q 012479 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-S----RSFAE---ARAAGFTEENGTLGD---IYETISGS 179 (462)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~-~----~s~~~---A~~~G~~~~d~~~~~---~~eav~~A 179 (462)
|+|.|+|. |.+|.++++.|.+. |++|++..|.. + ...+. ....|+......+.+ +.++++++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~ 78 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASLSF------SHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQV 78 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHT------TCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTC
T ss_pred cEEEEEcCCchhHHHHHHHHHhC------CCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCC
Confidence 78999995 99999999999998 88888777764 1 11111 123454321111233 45678899
Q ss_pred CeEEEeecch---hHHHHHHHH
Q 012479 180 DLVLLLISDA---AQADNYEKI 198 (462)
Q Consensus 180 DvViLavpd~---a~~~vl~eI 198 (462)
|+||.+.... .+..+++..
T Consensus 79 d~vi~~a~~~~~~~~~~l~~aa 100 (321)
T 3c1o_A 79 DIVISALPFPMISSQIHIINAI 100 (321)
T ss_dssp SEEEECCCGGGSGGGHHHHHHH
T ss_pred CEEEECCCccchhhHHHHHHHH
Confidence 9999988743 344555543
No 386
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=92.89 E-value=0.26 Score=48.10 Aligned_cols=82 Identities=17% Similarity=0.166 Sum_probs=53.8
Q ss_pred CEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHH------HHHcCceecCCCcCC---Hhhhhc--cC
Q 012479 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAE------ARAAGFTEENGTLGD---IYETIS--GS 179 (462)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~------A~~~G~~~~d~~~~~---~~eav~--~A 179 (462)
++|.|+|. |.+|.+++..|.+. |++|++..|..+...+. ....|+........+ ..++++ ++
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~------g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 84 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDA------HRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEI 84 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHT------TCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTC
T ss_pred CeEEEECCCcHHHHHHHHHHHHC------CCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCC
Confidence 78999997 99999999999998 88888877764221111 123455322112333 445778 99
Q ss_pred CeEEEeecch---hHHHHHHHHH
Q 012479 180 DLVLLLISDA---AQADNYEKIF 199 (462)
Q Consensus 180 DvViLavpd~---a~~~vl~eI~ 199 (462)
|+||.+.... .+..+++...
T Consensus 85 d~Vi~~a~~~n~~~~~~l~~aa~ 107 (346)
T 3i6i_A 85 DIVVSTVGGESILDQIALVKAMK 107 (346)
T ss_dssp CEEEECCCGGGGGGHHHHHHHHH
T ss_pred CEEEECCchhhHHHHHHHHHHHH
Confidence 9999998763 2334555433
No 387
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=92.84 E-value=0.25 Score=50.60 Aligned_cols=70 Identities=13% Similarity=0.014 Sum_probs=49.9
Q ss_pred ccCCCCEEEEEccc--chHHHHHHHHHHhhhhhcCCcEEEEEecC------CchhHH----HHHHcCceecCCCcCCHhh
Q 012479 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRK------GSRSFA----EARAAGFTEENGTLGDIYE 174 (462)
Q Consensus 107 ~l~gikkIgIIG~G--~mG~AiA~~Lrds~~~~g~G~~Vivg~r~------~~~s~~----~A~~~G~~~~d~~~~~~~e 174 (462)
.|+| .||++||=+ +++.|++..+..- |.++.+.... ++...+ .+++.|.... .+.+++|
T Consensus 177 ~l~g-lkva~vGD~~nnva~Sl~~~~~~l------G~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~--~~~d~~e 247 (365)
T 4amu_A 177 NLKN-KKIVFIGDYKNNVGVSTMIGAAFN------GMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLR--FSTDKIL 247 (365)
T ss_dssp SCTT-CEEEEESSTTSHHHHHHHHHHHHT------TCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEE--EESCHHH
T ss_pred CCCC-CEEEEECCCCcchHHHHHHHHHHc------CCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEE--EECCHHH
Confidence 3789 999999987 7889999998877 8888776433 122222 2445563210 1578999
Q ss_pred hhccCCeEEEe
Q 012479 175 TISGSDLVLLL 185 (462)
Q Consensus 175 av~~ADvViLa 185 (462)
++++||+|+.-
T Consensus 248 av~~aDVVytd 258 (365)
T 4amu_A 248 AAQDADVIYTD 258 (365)
T ss_dssp HTTTCSEEEEC
T ss_pred HhcCCCEEEec
Confidence 99999999984
No 388
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=92.78 E-value=0.24 Score=48.94 Aligned_cols=91 Identities=19% Similarity=0.160 Sum_probs=60.4
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhh------ccCCe
Q 012479 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI------SGSDL 181 (462)
Q Consensus 109 ~gikkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav------~~ADv 181 (462)
.| ++|.|+| .|.+|.+.++-++.. |.+|++. ++ .+..+.+++.|....+ ...+..+.+ ...|+
T Consensus 150 ~g-~~VlV~Ga~g~iG~~~~q~a~~~------Ga~Vi~~-~~-~~~~~~~~~lGa~~i~-~~~~~~~~~~~~~~~~g~D~ 219 (343)
T 3gaz_A 150 DG-QTVLIQGGGGGVGHVAIQIALAR------GARVFAT-AR-GSDLEYVRDLGATPID-ASREPEDYAAEHTAGQGFDL 219 (343)
T ss_dssp TT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEE-EC-HHHHHHHHHHTSEEEE-TTSCHHHHHHHHHTTSCEEE
T ss_pred CC-CEEEEecCCCHHHHHHHHHHHHC------CCEEEEE-eC-HHHHHHHHHcCCCEec-cCCCHHHHHHHHhcCCCceE
Confidence 56 8999999 799999999999988 8887665 44 4457788888875322 122333332 25789
Q ss_pred EEEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 012479 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 182 ViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~G 213 (462)
||-++... .+......++++-.++..++
T Consensus 220 vid~~g~~----~~~~~~~~l~~~G~iv~~g~ 247 (343)
T 3gaz_A 220 VYDTLGGP----VLDASFSAVKRFGHVVSCLG 247 (343)
T ss_dssp EEESSCTH----HHHHHHHHEEEEEEEEESCC
T ss_pred EEECCCcH----HHHHHHHHHhcCCeEEEEcc
Confidence 98888753 34444455666555554443
No 389
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=92.70 E-value=0.27 Score=49.51 Aligned_cols=68 Identities=15% Similarity=0.079 Sum_probs=49.7
Q ss_pred ccCCCCEEEEEccc--chHHHHHHHHHHhhhhhcCCcEEEEEecCCc------hhHHHHH----H--cCc--eecCCCcC
Q 012479 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS------RSFAEAR----A--AGF--TEENGTLG 170 (462)
Q Consensus 107 ~l~gikkIgIIG~G--~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~------~s~~~A~----~--~G~--~~~d~~~~ 170 (462)
.|+| .||++||=+ ++.+|++..+..- |.++.+.....- ...+.++ + .|. .. +.
T Consensus 158 ~l~g-l~va~vGD~~~~va~Sl~~~~~~~------G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~----~~ 226 (328)
T 3grf_A 158 GFKG-IKFAYCGDSMNNVTYDLMRGCALL------GMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKI----FH 226 (328)
T ss_dssp TGGG-CCEEEESCCSSHHHHHHHHHHHHH------TCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEE----ES
T ss_pred ccCC-cEEEEeCCCCcchHHHHHHHHHHc------CCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEE----Ec
Confidence 6889 999999976 8899999999887 888877644321 1223333 3 463 32 57
Q ss_pred CHhhhhccCCeEEEe
Q 012479 171 DIYETISGSDLVLLL 185 (462)
Q Consensus 171 ~~~eav~~ADvViLa 185 (462)
+++|++++||+|+.-
T Consensus 227 d~~eav~~aDvvytd 241 (328)
T 3grf_A 227 DCKKGCEGVDVVYTD 241 (328)
T ss_dssp SHHHHHTTCSEEEEC
T ss_pred CHHHHhcCCCEEEec
Confidence 899999999999863
No 390
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=92.68 E-value=0.12 Score=51.21 Aligned_cols=70 Identities=13% Similarity=-0.013 Sum_probs=52.1
Q ss_pred ccCCCCEEEEEcc---cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEE
Q 012479 107 AFNGINQIGVIGW---GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVL 183 (462)
Q Consensus 107 ~l~gikkIgIIG~---G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvVi 183 (462)
.|+| .||++||= +++.+|++..+..- |.++.+...+.-.-.. ..+.|+.. +.+++|++++||+|+
T Consensus 143 ~l~g-l~va~vGDl~~~rva~Sl~~~~~~~------g~~v~~~~P~~~~p~~-~~~~g~~~----~~d~~eav~~aDvvy 210 (291)
T 3d6n_B 143 EVKD-LRVLYVGDIKHSRVFRSGAPLLNMF------GAKIGVCGPKTLIPRD-VEVFKVDV----FDDVDKGIDWADVVI 210 (291)
T ss_dssp CCTT-CEEEEESCCTTCHHHHHHHHHHHHT------TCEEEEESCGGGSCTT-GGGGCEEE----ESSHHHHHHHCSEEE
T ss_pred CcCC-cEEEEECCCCCCchHHHHHHHHHHC------CCEEEEECCchhCCch-HHHCCCEE----EcCHHHHhCCCCEEE
Confidence 4789 99999997 89999999999988 9888776543210001 12457654 678999999999999
Q ss_pred Eeecch
Q 012479 184 LLISDA 189 (462)
Q Consensus 184 Lavpd~ 189 (462)
. +-.+
T Consensus 211 ~-~~~q 215 (291)
T 3d6n_B 211 W-LRLQ 215 (291)
T ss_dssp E-CCCC
T ss_pred E-eCcc
Confidence 8 6543
No 391
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=92.62 E-value=0.55 Score=46.65 Aligned_cols=92 Identities=12% Similarity=0.020 Sum_probs=59.0
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHc----Cc---eecCCCcCCHhhh-hcc
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA----GF---TEENGTLGDIYET-ISG 178 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~----G~---~~~d~~~~~~~ea-v~~ 178 (462)
.-.| ++|..||+|..|.+...-.+.. |.+| ++.+.++...+.|++. |. ... ..+..+. -..
T Consensus 120 l~~g-~rVLDIGcG~G~~ta~~lA~~~------ga~V-~gIDis~~~l~~Ar~~~~~~gl~~v~~v---~gDa~~l~d~~ 188 (298)
T 3fpf_A 120 FRRG-ERAVFIGGGPLPLTGILLSHVY------GMRV-NVVEIEPDIAELSRKVIEGLGVDGVNVI---TGDETVIDGLE 188 (298)
T ss_dssp CCTT-CEEEEECCCSSCHHHHHHHHTT------CCEE-EEEESSHHHHHHHHHHHHHHTCCSEEEE---ESCGGGGGGCC
T ss_pred CCCc-CEEEEECCCccHHHHHHHHHcc------CCEE-EEEECCHHHHHHHHHHHHhcCCCCeEEE---ECchhhCCCCC
Confidence 3456 8999999998765433222223 5564 5777777667666653 43 110 2233332 145
Q ss_pred CCeEEEeecchhHHHHHHHHHhcCCCCcEEE
Q 012479 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (462)
Q Consensus 179 ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~ 209 (462)
.|+|++..-.....++++++...||||-.|.
T Consensus 189 FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lv 219 (298)
T 3fpf_A 189 FDVLMVAALAEPKRRVFRNIHRYVDTETRII 219 (298)
T ss_dssp CSEEEECTTCSCHHHHHHHHHHHCCTTCEEE
T ss_pred cCEEEECCCccCHHHHHHHHHHHcCCCcEEE
Confidence 7999987655555689999999999998654
No 392
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=92.60 E-value=0.13 Score=51.32 Aligned_cols=92 Identities=20% Similarity=0.213 Sum_probs=59.3
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceec-CCCcCCHhhhhc------cCCe
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS------GSDL 181 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~eav~------~ADv 181 (462)
.| ++|.|+|.|.+|.+.++-++.. |.+|++..+. .+..+.+++.|.... |....+..+.+. ..|+
T Consensus 189 ~g-~~VlV~G~G~vG~~a~qla~~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~ 260 (363)
T 3uog_A 189 AG-DRVVVQGTGGVALFGLQIAKAT------GAEVIVTSSS-REKLDRAFALGADHGINRLEEDWVERVYALTGDRGADH 260 (363)
T ss_dssp TT-CEEEEESSBHHHHHHHHHHHHT------TCEEEEEESC-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEecC-chhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceE
Confidence 46 8999999999999999999988 8887665544 455777888886320 111123333221 5789
Q ss_pred EEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 182 ViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
||-++...... .....++++-.++..+
T Consensus 261 vid~~g~~~~~----~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 261 ILEIAGGAGLG----QSLKAVAPDGRISVIG 287 (363)
T ss_dssp EEEETTSSCHH----HHHHHEEEEEEEEEEC
T ss_pred EEECCChHHHH----HHHHHhhcCCEEEEEe
Confidence 99888854433 3334555655555443
No 393
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=92.54 E-value=0.33 Score=48.03 Aligned_cols=44 Identities=16% Similarity=0.085 Sum_probs=30.4
Q ss_pred cccccccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEec
Q 012479 98 RDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLR 148 (462)
Q Consensus 98 ~~~f~~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r 148 (462)
+|.+....+.|++ .+|.|||+|-.|..++++|..+ |+ ++.+.++
T Consensus 24 ~~G~~~~q~kL~~-~~VlVvGaGGlGs~va~~La~a------GVG~i~lvD~ 68 (292)
T 3h8v_A 24 RMGIVSDYEKIRT-FAVAIVGVGGVGSVTAEMLTRC------GIGKLLLFDY 68 (292)
T ss_dssp --------CGGGG-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEECC
T ss_pred ccChHHHHHHHhC-CeEEEECcCHHHHHHHHHHHHc------CCCEEEEECC
Confidence 3555333467888 9999999999999999999998 76 5555443
No 394
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=92.52 E-value=0.33 Score=49.34 Aligned_cols=89 Identities=12% Similarity=0.083 Sum_probs=55.0
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEe-c-CCchhHHHH-------------HHcCceecCCCcCCHhhh
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGL-R-KGSRSFAEA-------------RAAGFTEENGTLGDIYET 175 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~-r-~~~~s~~~A-------------~~~G~~~~d~~~~~~~ea 175 (462)
.|||||| .|..|.-+.+-|.+. + .+++.... + ...+..... .+.-+. ..+. +.
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~h-P----~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~-----~~~~-~~ 76 (359)
T 4dpk_A 8 LKAAILGATGLVGIEYVRMLSNH-P----YIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIK-----PTDP-KL 76 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTC-S----SEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCE-----ECCG-GG
T ss_pred CeEEEECCCCHHHHHHHHHHHhC-C----CceEEEEECchhcCCChhHhcccccccccccccccceEE-----eCCH-HH
Confidence 5899999 699999999977654 1 23443222 2 212223221 111111 1122 34
Q ss_pred hccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEeccc
Q 012479 176 ISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (462)
Q Consensus 176 v~~ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~G~ 214 (462)
++++|+||+|+|.....++.+.+. +.|..++|.++-
T Consensus 77 ~~~vDvvf~a~p~~~s~~~a~~~~---~~G~~vIDlSa~ 112 (359)
T 4dpk_A 77 MDDVDIIFSPLPQGAAGPVEEQFA---KEGFPVISNSPD 112 (359)
T ss_dssp CTTCCEEEECCCTTTHHHHHHHHH---HTTCEEEECSST
T ss_pred hcCCCEEEECCChHHHHHHHHHHH---HCCCEEEEcCCC
Confidence 579999999999998888777654 468878777663
No 395
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=92.52 E-value=0.33 Score=49.34 Aligned_cols=89 Identities=12% Similarity=0.083 Sum_probs=55.0
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEe-c-CCchhHHHH-------------HHcCceecCCCcCCHhhh
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGL-R-KGSRSFAEA-------------RAAGFTEENGTLGDIYET 175 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~-r-~~~~s~~~A-------------~~~G~~~~d~~~~~~~ea 175 (462)
.|||||| .|..|.-+.+-|.+. + .+++.... + ...+..... .+.-+. ..+. +.
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~h-P----~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~-----~~~~-~~ 76 (359)
T 4dpl_A 8 LKAAILGATGLVGIEYVRMLSNH-P----YIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIK-----PTDP-KL 76 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTC-S----SEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCE-----ECCG-GG
T ss_pred CeEEEECCCCHHHHHHHHHHHhC-C----CceEEEEECchhcCCChhHhcccccccccccccccceEE-----eCCH-HH
Confidence 5899999 699999999977654 1 23443222 2 212223221 111111 1122 34
Q ss_pred hccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEeccc
Q 012479 176 ISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (462)
Q Consensus 176 v~~ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~G~ 214 (462)
++++|+||+|+|.....++.+.+. +.|..++|.++-
T Consensus 77 ~~~vDvvf~a~p~~~s~~~a~~~~---~~G~~vIDlSa~ 112 (359)
T 4dpl_A 77 MDDVDIIFSPLPQGAAGPVEEQFA---KEGFPVISNSPD 112 (359)
T ss_dssp CTTCCEEEECCCTTTHHHHHHHHH---HTTCEEEECSST
T ss_pred hcCCCEEEECCChHHHHHHHHHHH---HCCCEEEEcCCC
Confidence 579999999999998888777654 468878777663
No 396
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=92.26 E-value=0.42 Score=49.76 Aligned_cols=95 Identities=12% Similarity=0.181 Sum_probs=64.3
Q ss_pred cccCCCCEEEEEccc----------chHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcC--ceecCCCcCCHh
Q 012479 106 DAFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG--FTEENGTLGDIY 173 (462)
Q Consensus 106 ~~l~gikkIgIIG~G----------~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G--~~~~d~~~~~~~ 173 (462)
..++| +||+|.|+- +-...++..|.+. |.+|.+.+..-.. +.....| +.. +.+..
T Consensus 314 ~~~~~-~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~------g~~v~~~DP~~~~--~~~~~~~~~~~~----~~~~~ 380 (450)
T 3gg2_A 314 GNVQG-RCVAIWGLSFKPGTDDMREAPSLVLIEKLLEV------GCRVRVYDPVAMK--EAQKRLGDKVEY----TTDMY 380 (450)
T ss_dssp TCCTT-CEEEEECCSSSTTCCCCTTCHHHHHHHHHHHT------TCEEEEECSSCHH--HHHHHHGGGSEE----CSSHH
T ss_pred ccCCC-CEEEEEeeeeCCCCcccccChHHHHHHHHHHC------CCEEEEECCCCcH--HHHHhcCcccee----cCCHH
Confidence 34688 999999974 4467788888888 9888776543221 1112233 442 46788
Q ss_pred hhhccCCeEEEeecchhHHH-HHHHHHhcCCCCcEEEEeccc
Q 012479 174 ETISGSDLVLLLISDAAQAD-NYEKIFSCMKPNSILGLSHGF 214 (462)
Q Consensus 174 eav~~ADvViLavpd~a~~~-vl~eI~~~Lk~gaiL~~a~G~ 214 (462)
+++++||+|+++|.-....+ -++.+...|+ +.+|.|.-++
T Consensus 381 ~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~-~~~i~D~r~~ 421 (450)
T 3gg2_A 381 DAVRGAEALFHVTEWKEFRMPDWSALSQAMA-ASLVIDGRNV 421 (450)
T ss_dssp HHTTTCSCEEECSCCGGGSSCCHHHHHHHSS-SCEEEESSCC
T ss_pred HHhcCCCEEEEccCCHHHhhcCHHHHHHhcC-CCEEEECCCC
Confidence 99999999999998666543 2455666665 4577776554
No 397
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=92.23 E-value=0.45 Score=46.11 Aligned_cols=75 Identities=19% Similarity=0.120 Sum_probs=49.9
Q ss_pred cccCCCCEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHH---HH-------cCceecCCCcCC---
Q 012479 106 DAFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA---RA-------AGFTEENGTLGD--- 171 (462)
Q Consensus 106 ~~l~gikkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A---~~-------~G~~~~d~~~~~--- 171 (462)
..+++ |+|.|.| .|.+|.++++.|.+. |++|++..|......... .. .++........+
T Consensus 21 ~~~~~-~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~ 93 (351)
T 3ruf_A 21 LIFSP-KTWLITGVAGFIGSNLLEKLLKL------NQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTT 93 (351)
T ss_dssp HHHSC-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHH
T ss_pred CCCCC-CeEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHH
Confidence 34567 9999999 599999999999998 999887777543322222 11 233211111223
Q ss_pred HhhhhccCCeEEEeec
Q 012479 172 IYETISGSDLVLLLIS 187 (462)
Q Consensus 172 ~~eav~~ADvViLavp 187 (462)
..++++++|+||.+..
T Consensus 94 ~~~~~~~~d~Vih~A~ 109 (351)
T 3ruf_A 94 CEQVMKGVDHVLHQAA 109 (351)
T ss_dssp HHHHTTTCSEEEECCC
T ss_pred HHHHhcCCCEEEECCc
Confidence 3467789999998875
No 398
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=92.22 E-value=0.15 Score=46.28 Aligned_cols=71 Identities=18% Similarity=0.258 Sum_probs=47.5
Q ss_pred CCEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCC---HhhhhccCCeEEEee
Q 012479 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVLLLI 186 (462)
Q Consensus 111 ikkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~---~~eav~~ADvViLav 186 (462)
||+|.|+| .|.+|.++++.|.+. |++|++..|..++..... .++......+.+ ..++++++|+||.+.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 75 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNR------GFEVTAVVRHPEKIKIEN--EHLKVKKADVSSLDEVCEVCKGADAVISAF 75 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTT------TCEEEEECSCGGGCCCCC--TTEEEECCCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC------CCEEEEEEcCcccchhcc--CceEEEEecCCCHHHHHHHhcCCCEEEEeC
Confidence 48999999 599999999999998 998887777644321110 222211111223 446788999999987
Q ss_pred cch
Q 012479 187 SDA 189 (462)
Q Consensus 187 pd~ 189 (462)
.+.
T Consensus 76 ~~~ 78 (227)
T 3dhn_A 76 NPG 78 (227)
T ss_dssp CC-
T ss_pred cCC
Confidence 654
No 399
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=92.21 E-value=0.33 Score=46.15 Aligned_cols=72 Identities=14% Similarity=0.159 Sum_probs=48.3
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCCch----hHHH---HHHcCceecCCCcCC---HhhhhccCC
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR----SFAE---ARAAGFTEENGTLGD---IYETISGSD 180 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~----s~~~---A~~~G~~~~d~~~~~---~~eav~~AD 180 (462)
|+|.|+| .|.+|.+++..|.+. |++|++..|..+. ..+. ....|+........+ ..++++++|
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d 78 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISL------GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVD 78 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHT------TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCS
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC------CCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCC
Confidence 7899999 599999999999998 8888777776321 1111 122454321111233 456788999
Q ss_pred eEEEeecch
Q 012479 181 LVLLLISDA 189 (462)
Q Consensus 181 vViLavpd~ 189 (462)
+||.+....
T Consensus 79 ~vi~~a~~~ 87 (313)
T 1qyd_A 79 VVISALAGG 87 (313)
T ss_dssp EEEECCCCS
T ss_pred EEEECCccc
Confidence 999988643
No 400
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=92.20 E-value=0.56 Score=48.81 Aligned_cols=87 Identities=13% Similarity=0.073 Sum_probs=56.6
Q ss_pred ccccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHH-HHcCceecCCCcCCHhhhhccC
Q 012479 101 FNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA-RAAGFTEENGTLGDIYETISGS 179 (462)
Q Consensus 101 f~~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A-~~~G~~~~d~~~~~~~eav~~A 179 (462)
||.. -.++| ++|.|||.|..|.+-++.|.+. |.+|+|.........+.. .+.++....+ ..+ .+-+.++
T Consensus 4 ~P~~-~~l~~-~~vlVvGgG~va~~k~~~L~~~------ga~V~vi~~~~~~~~~~l~~~~~i~~~~~-~~~-~~~l~~~ 73 (457)
T 1pjq_A 4 LPIF-CQLRD-RDCLIVGGGDVAERKARLLLEA------GARLTVNALTFIPQFTVWANEGMLTLVEG-PFD-ETLLDSC 73 (457)
T ss_dssp EEEE-ECCBT-CEEEEECCSHHHHHHHHHHHHT------TBEEEEEESSCCHHHHHHHTTTSCEEEES-SCC-GGGGTTC
T ss_pred eeeE-EECCC-CEEEEECCCHHHHHHHHHHHhC------cCEEEEEcCCCCHHHHHHHhcCCEEEEEC-CCC-ccccCCc
Confidence 3444 45789 9999999999999999999999 988877765433323222 2234432111 112 2346789
Q ss_pred CeEEEeecchhH-HHHHHH
Q 012479 180 DLVLLLISDAAQ-ADNYEK 197 (462)
Q Consensus 180 DvViLavpd~a~-~~vl~e 197 (462)
|+||.++.+... ..++..
T Consensus 74 ~lVi~at~~~~~n~~i~~~ 92 (457)
T 1pjq_A 74 WLAIAATDDDTVNQRVSDA 92 (457)
T ss_dssp SEEEECCSCHHHHHHHHHH
T ss_pred cEEEEcCCCHHHHHHHHHH
Confidence 999998887754 344444
No 401
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=92.10 E-value=0.52 Score=44.73 Aligned_cols=71 Identities=23% Similarity=0.303 Sum_probs=48.4
Q ss_pred CEEEEEcc-cchHHHHHHHHHHhhhhhcCC-cEEEEEecCCchhH-HHHHHcCceecCCCcCC---HhhhhccCCeEEEe
Q 012479 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSF-AEARAAGFTEENGTLGD---IYETISGSDLVLLL 185 (462)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lrds~~~~g~G-~~Vivg~r~~~~s~-~~A~~~G~~~~d~~~~~---~~eav~~ADvViLa 185 (462)
|+|.|+|. |.+|.++++.|.+. | ++|++..|...+.. +.....|+........+ ..++++++|+||.+
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~------g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 79 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLED------GTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIV 79 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH------CSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCchHHHHHHHHHHhc------CCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEe
Confidence 78999997 99999999999998 8 88887777644321 22223454321111233 44678899999998
Q ss_pred ecc
Q 012479 186 ISD 188 (462)
Q Consensus 186 vpd 188 (462)
...
T Consensus 80 a~~ 82 (299)
T 2wm3_A 80 TNY 82 (299)
T ss_dssp CCH
T ss_pred CCC
Confidence 753
No 402
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=92.10 E-value=0.28 Score=48.99 Aligned_cols=65 Identities=22% Similarity=0.207 Sum_probs=47.6
Q ss_pred ccCCCCEEEEEccc---chHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEE
Q 012479 107 AFNGINQIGVIGWG---SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVL 183 (462)
Q Consensus 107 ~l~gikkIgIIG~G---~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvVi 183 (462)
.|+| .||++||=| ++..|++..+..- |.++.+.....-.. +. .+.|. ..+++|++++||+|+
T Consensus 144 ~l~g-lkva~vGD~~~~rva~Sl~~~~~~~------G~~v~~~~P~~~~~-~~-~~~g~------~~d~~eav~~aDvvy 208 (304)
T 3r7f_A 144 TFKG-LTVSIHGDIKHSRVARSNAEVLTRL------GARVLFSGPSEWQD-EE-NTFGT------YVSMDEAVESSDVVM 208 (304)
T ss_dssp CCTT-CEEEEESCCTTCHHHHHHHHHHHHT------TCEEEEESCGGGSC-TT-CSSCE------ECCHHHHHHHCSEEE
T ss_pred CCCC-CEEEEEcCCCCcchHHHHHHHHHHc------CCEEEEECCCccCc-ch-hhcCc------cCCHHHHhCCCCEEE
Confidence 5789 999999975 6999999999888 98887765432111 11 12342 468999999999998
Q ss_pred Eee
Q 012479 184 LLI 186 (462)
Q Consensus 184 Lav 186 (462)
...
T Consensus 209 t~~ 211 (304)
T 3r7f_A 209 LLR 211 (304)
T ss_dssp ECC
T ss_pred ecc
Confidence 864
No 403
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=92.08 E-value=0.14 Score=49.42 Aligned_cols=90 Identities=21% Similarity=0.188 Sum_probs=58.9
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceec-CCCc-CCHhhhhccCCeEEEe
Q 012479 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTL-GDIYETISGSDLVLLL 185 (462)
Q Consensus 109 ~gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~-~~~~eav~~ADvViLa 185 (462)
.| ++|.|+|. |.+|...++-++.. |.+|++..++ ++..+.+++.|.... +... .+..+.++..|+||-
T Consensus 125 ~g-~~vlV~Ga~G~vG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid- 195 (302)
T 1iz0_A 125 PG-EKVLVQAAAGALGTAAVQVARAM------GLRVLAAASR-PEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE- 195 (302)
T ss_dssp TT-CEEEESSTTBHHHHHHHHHHHHT------TCEEEEEESS-GGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-
T ss_pred CC-CEEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-
Confidence 46 89999998 99999999999988 8887666554 444667777886320 0000 112233467899998
Q ss_pred ecchhHHHHHHHHHhcCCCCcEEEEe
Q 012479 186 ISDAAQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 186 vpd~a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
+... .++.....++++-.++..
T Consensus 196 ~g~~----~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 196 VRGK----EVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp CSCT----THHHHHTTEEEEEEEEEC
T ss_pred CCHH----HHHHHHHhhccCCEEEEE
Confidence 7753 345555667666555444
No 404
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=92.06 E-value=0.45 Score=48.67 Aligned_cols=88 Identities=13% Similarity=0.123 Sum_probs=59.1
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCH---------------
Q 012479 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI--------------- 172 (462)
Q Consensus 109 ~gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~--------------- 172 (462)
.| ++|.|+|. |.+|.+.++-++.. |.+|++..+. .+..+.+++.|... +.+.
T Consensus 220 ~g-~~VlV~GasG~iG~~a~qla~~~------Ga~vi~~~~~-~~~~~~~~~lGa~~----~i~~~~~~~~~~~~~~~~~ 287 (447)
T 4a0s_A 220 QG-DIVLIWGASGGLGSYAIQFVKNG------GGIPVAVVSS-AQKEAAVRALGCDL----VINRAELGITDDIADDPRR 287 (447)
T ss_dssp TT-CEEEETTTTSHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCCC----EEEHHHHTCCTTGGGCHHH
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHhcCCCE----EEecccccccccccccccc
Confidence 46 89999998 99999999999988 8887766654 55577888888642 1111
Q ss_pred --------hhhh-----ccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 173 --------YETI-----SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 173 --------~eav-----~~ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
.+.+ ...|+||-++... .++.....++++-.++..+
T Consensus 288 ~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~----~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 288 VVETGRKLAKLVVEKAGREPDIVFEHTGRV----TFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHHHHSSCCSEEEECSCHH----HHHHHHHHSCTTCEEEESC
T ss_pred cchhhhHHHHHHHHHhCCCceEEEECCCch----HHHHHHHHHhcCCEEEEEe
Confidence 1111 2578888887753 3445555677766555443
No 405
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=92.05 E-value=0.22 Score=48.83 Aligned_cols=92 Identities=15% Similarity=0.157 Sum_probs=61.2
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceec-CCCcCCHhhhh------ccCC
Q 012479 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (462)
Q Consensus 109 ~gikkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~eav------~~AD 180 (462)
+| ++|.|+| .|.+|.+.++-++.. |.+|++..++ .+..+.+++.|.... +....+..+.+ ...|
T Consensus 148 ~g-~~vlV~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D 219 (334)
T 3qwb_A 148 KG-DYVLLFAAAGGVGLILNQLLKMK------GAHTIAVAST-DEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVD 219 (334)
T ss_dssp TT-CEEEESSTTBHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCce
Confidence 56 8999999 899999999999988 8887766554 455678888886320 11112333322 2479
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 181 vViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
+|+-++... .++.....++++-.++..+
T Consensus 220 ~vid~~g~~----~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 220 ASFDSVGKD----TFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp EEEECCGGG----GHHHHHHHEEEEEEEEECC
T ss_pred EEEECCChH----HHHHHHHHhccCCEEEEEc
Confidence 999998864 3444455666766655544
No 406
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=92.04 E-value=0.17 Score=50.09 Aligned_cols=93 Identities=25% Similarity=0.291 Sum_probs=59.6
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCCchhHHHHHHcCceec-CCCcCCHhhhhc------cCC
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS------GSD 180 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~eav~------~AD 180 (462)
.| .+|.|+|.|.+|...++-++.. |. +|++ .+.+++..+.+++.|.... +....+..+.+. ..|
T Consensus 166 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~~Vi~-~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D 237 (352)
T 3fpc_A 166 LG-DTVCVIGIGPVGLMSVAGANHL------GAGRIFA-VGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVD 237 (352)
T ss_dssp TT-CCEEEECCSHHHHHHHHHHHTT------TCSSEEE-ECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCcEEEE-ECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCC
Confidence 46 8999999999999999999888 87 5655 4555556788898887420 111122323221 479
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 181 vViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
+||-++.... .+++....++++-.++..+
T Consensus 238 ~v~d~~g~~~---~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 238 KVVIAGGDVH---TFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp EEEECSSCTT---HHHHHHHHEEEEEEEEECC
T ss_pred EEEECCCChH---HHHHHHHHHhcCCEEEEec
Confidence 9998887632 2334444556665555443
No 407
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=91.98 E-value=0.38 Score=48.95 Aligned_cols=68 Identities=15% Similarity=0.073 Sum_probs=48.8
Q ss_pred cCCCCEEEEEccc-chHHHHHHHHHHhhhhhcCCcEEEEEecC----CchhHHHHHHc--------CceecCCCcCCHhh
Q 012479 108 FNGINQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFAEARAA--------GFTEENGTLGDIYE 174 (462)
Q Consensus 108 l~gikkIgIIG~G-~mG~AiA~~Lrds~~~~g~G~~Vivg~r~----~~~s~~~A~~~--------G~~~~d~~~~~~~e 174 (462)
|+| .||++||=+ ++.+|++..+..- |.++.+.... ++...+.+++. ++.. +.+++|
T Consensus 186 l~g-lkva~vGD~~nva~Sl~~~l~~l------G~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~----~~d~~e 254 (353)
T 3sds_A 186 LEG-LKIAWVGDANNVLFDLAIAATKM------GVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQ----TTVPEV 254 (353)
T ss_dssp CTT-CEEEEESCCCHHHHHHHHHHHHT------TCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEE----ESCHHH
T ss_pred cCC-CEEEEECCCchHHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEE----ECCHHH
Confidence 589 999999966 7888888888877 8888776443 22333444432 2333 578999
Q ss_pred hhccCCeEEEee
Q 012479 175 TISGSDLVLLLI 186 (462)
Q Consensus 175 av~~ADvViLav 186 (462)
++++||+|+.-+
T Consensus 255 av~~aDVvytd~ 266 (353)
T 3sds_A 255 AVKDADVIVTDT 266 (353)
T ss_dssp HTTTCSEEEECC
T ss_pred HhcCCCEEEeCC
Confidence 999999998754
No 408
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=91.97 E-value=0.89 Score=46.58 Aligned_cols=69 Identities=22% Similarity=0.178 Sum_probs=41.2
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcCCc-----EEEEEecCCchh----HHHHHH--cCcee--cC-CCcCCHhhhh
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI-----VVKVGLRKGSRS----FAEARA--AGFTE--EN-GTLGDIYETI 176 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~-----~Vivg~r~~~~s----~~~A~~--~G~~~--~d-~~~~~~~eav 176 (462)
.||+||| .|.+|.+++..|... ++ .+++.+-..... ...+.+ ++... .+ ....+..+++
T Consensus 33 ~KV~ViGAaG~VG~~la~~l~~~------~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~ 106 (375)
T 7mdh_A 33 VNIAVSGAAGMISNHLLFKLASG------EVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVF 106 (375)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT------TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHT
T ss_pred CEEEEECCCChHHHHHHHHHHcC------CcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHh
Confidence 7999999 799999999999877 44 144432211121 122221 22210 00 0023567889
Q ss_pred ccCCeEEEee
Q 012479 177 SGSDLVLLLI 186 (462)
Q Consensus 177 ~~ADvViLav 186 (462)
++||+||++-
T Consensus 107 ~daDvVVita 116 (375)
T 7mdh_A 107 EDVDWALLIG 116 (375)
T ss_dssp TTCSEEEECC
T ss_pred CCCCEEEEcC
Confidence 9999999964
No 409
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=91.96 E-value=0.27 Score=48.41 Aligned_cols=92 Identities=14% Similarity=0.185 Sum_probs=59.1
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceec-CCCcCCHhhhh----ccCCeEE
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI----SGSDLVL 183 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~eav----~~ADvVi 183 (462)
.| ++|.|+|.|.+|...++-++.. |.+|++..+ +++..+.+++.|.... |-...+..+.+ ...|+||
T Consensus 164 ~g-~~VlV~GaG~vG~~~~~~a~~~------Ga~Vi~~~~-~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vi 235 (339)
T 1rjw_A 164 PG-EWVAIYGIGGLGHVAVQYAKAM------GLNVVAVDI-GDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAV 235 (339)
T ss_dssp TT-CEEEEECCSTTHHHHHHHHHHT------TCEEEEECS-CHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEeC-CHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEE
Confidence 46 8999999999999999999988 887765544 4555677888886320 11111222222 3579999
Q ss_pred EeecchhHHHHHHHHHhcCCCCcEEEEe
Q 012479 184 LLISDAAQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 184 Lavpd~a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
-++... ..+++....++++-.++..
T Consensus 236 d~~g~~---~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 236 VTAVSK---PAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp ESSCCH---HHHHHHHHHEEEEEEEEEC
T ss_pred ECCCCH---HHHHHHHHHhhcCCEEEEe
Confidence 888752 2344444556665554443
No 410
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=91.88 E-value=0.26 Score=48.08 Aligned_cols=92 Identities=14% Similarity=0.106 Sum_probs=60.2
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceec-CCCcCCHhhhh------ccCC
Q 012479 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (462)
Q Consensus 109 ~gikkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~eav------~~AD 180 (462)
+| ++|.|+| .|.+|.+.++-++.. |.+|++..++ .+..+.+++.|.... +....+..+.+ ...|
T Consensus 140 ~g-~~VlV~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~D 211 (325)
T 3jyn_A 140 PG-EIILFHAAAGGVGSLACQWAKAL------GAKLIGTVSS-PEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCP 211 (325)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHH------TCEEEEEESS-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEE
T ss_pred CC-CEEEEEcCCcHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCce
Confidence 56 8999999 899999999999988 8887766554 445677788775310 11112222322 2578
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 181 vViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
+||-++... .+....+.++++-.++..+
T Consensus 212 vvid~~g~~----~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 212 VVYDGVGQD----TWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp EEEESSCGG----GHHHHHTTEEEEEEEEECC
T ss_pred EEEECCChH----HHHHHHHHhcCCCEEEEEe
Confidence 888888763 3445556666666555443
No 411
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=91.78 E-value=0.22 Score=48.86 Aligned_cols=80 Identities=14% Similarity=0.150 Sum_probs=46.4
Q ss_pred ccccccccCCCCEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcC-C---Hhhh
Q 012479 101 FNLLPDAFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG-D---IYET 175 (462)
Q Consensus 101 f~~~~~~l~gikkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~-~---~~ea 175 (462)
++.+...+++ |+|.|+| .|.+|..+++.|.+. .|++|++..|..++........++......+. + ..++
T Consensus 15 ~~~~~~~m~~-~~vlVtGatG~iG~~l~~~L~~~-----~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~ 88 (372)
T 3slg_A 15 QTQGPGSMKA-KKVLILGVNGFIGHHLSKRILET-----TDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYH 88 (372)
T ss_dssp --------CC-CEEEEESCSSHHHHHHHHHHHHH-----SSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHH
T ss_pred hhcCCcccCC-CEEEEECCCChHHHHHHHHHHhC-----CCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHH
Confidence 6666677787 9999999 699999999999875 15788777776443222221133322111122 2 3457
Q ss_pred hccCCeEEEee
Q 012479 176 ISGSDLVLLLI 186 (462)
Q Consensus 176 v~~ADvViLav 186 (462)
++++|+||.+.
T Consensus 89 ~~~~d~Vih~A 99 (372)
T 3slg_A 89 VKKCDVILPLV 99 (372)
T ss_dssp HHHCSEEEECB
T ss_pred hccCCEEEEcC
Confidence 78999999754
No 412
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=91.75 E-value=0.36 Score=50.20 Aligned_cols=68 Identities=16% Similarity=0.170 Sum_probs=49.9
Q ss_pred cCCCCEEEEEc-----cc---chHHHHHHHHHHhhhhhcCCcEEEEEecCC----chhHHH----HHHcCc--eecCCCc
Q 012479 108 FNGINQIGVIG-----WG---SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAE----ARAAGF--TEENGTL 169 (462)
Q Consensus 108 l~gikkIgIIG-----~G---~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~----~~s~~~----A~~~G~--~~~d~~~ 169 (462)
|+| .||+||| +| ++..|++..+..- |.+|.+..... +...+. +++.|. .. +
T Consensus 186 l~G-lkva~vgd~~~s~Gd~nnVa~Sli~~l~~l------G~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~----~ 254 (418)
T 2yfk_A 186 LKG-KKVAMTWAYSPSYGKPLSVPQGIVGLMTRL------GMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTK----T 254 (418)
T ss_dssp GTT-CEEEEECCCCSSSCCCSHHHHHHHHHHGGG------TCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEE----E
T ss_pred cCC-CEEEEEeccccccCccchHHHHHHHHHHHc------CCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEE----E
Confidence 789 9999997 34 4999999999887 98887765542 222333 345664 32 5
Q ss_pred CCHhhhhccCCeEEEee
Q 012479 170 GDIYETISGSDLVLLLI 186 (462)
Q Consensus 170 ~~~~eav~~ADvViLav 186 (462)
.+++|++++||+|+.-+
T Consensus 255 ~d~~eav~~ADVVytd~ 271 (418)
T 2yfk_A 255 NSMAEAFKDADVVYPKS 271 (418)
T ss_dssp SCHHHHHTTCSEEEECC
T ss_pred cCHHHHhcCCCEEEEcc
Confidence 78999999999999865
No 413
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=91.71 E-value=1 Score=40.31 Aligned_cols=92 Identities=14% Similarity=0.074 Sum_probs=58.4
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHc----Cc---eecCCCcCCHhh---hhcc
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA----GF---TEENGTLGDIYE---TISG 178 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~----G~---~~~d~~~~~~~e---av~~ 178 (462)
+| .+|.-||+|. | .++..|.+. +...+| ++.+.++...+.|++. |+ ... ..+..+ ....
T Consensus 40 ~~-~~vLDiG~G~-G-~~~~~la~~----~~~~~v-~~vD~s~~~~~~a~~~~~~~~~~~v~~~---~~d~~~~~~~~~~ 108 (204)
T 3e05_A 40 DD-LVMWDIGAGS-A-SVSIEASNL----MPNGRI-FALERNPQYLGFIRDNLKKFVARNVTLV---EAFAPEGLDDLPD 108 (204)
T ss_dssp TT-CEEEEETCTT-C-HHHHHHHHH----CTTSEE-EEEECCHHHHHHHHHHHHHHTCTTEEEE---ECCTTTTCTTSCC
T ss_pred CC-CEEEEECCCC-C-HHHHHHHHH----CCCCEE-EEEeCCHHHHHHHHHHHHHhCCCcEEEE---eCChhhhhhcCCC
Confidence 46 8999999997 3 344455554 002454 5666666666666542 32 110 123222 2256
Q ss_pred CCeEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 012479 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 179 ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
.|+|++..+......+++++...|+||-.+++.
T Consensus 109 ~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 141 (204)
T 3e05_A 109 PDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLN 141 (204)
T ss_dssp CSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEE
Confidence 899999887777788999999999998876544
No 414
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=91.67 E-value=0.25 Score=48.78 Aligned_cols=90 Identities=16% Similarity=0.182 Sum_probs=59.2
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceec-CCCcCCHhhhhc------cCC
Q 012479 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS------GSD 180 (462)
Q Consensus 109 ~gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~eav~------~AD 180 (462)
+| ++|.|+|. |.+|.+.++-++.. |.+|++..+. .+..+.+++.|.... +.. .+..+.+. ..|
T Consensus 159 ~g-~~VlV~Gasg~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~g~D 229 (342)
T 4eye_A 159 AG-ETVLVLGAAGGIGTAAIQIAKGM------GAKVIAVVNR-TAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVD 229 (342)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESS-GGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTSCEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCCCce
Confidence 46 89999998 99999999999988 9887766554 445678888776321 111 23333321 479
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 012479 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 181 vViLavpd~a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
+||-++... .++.....++++-.++..
T Consensus 230 vvid~~g~~----~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 230 MVVDPIGGP----AFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp EEEESCC------CHHHHHHTEEEEEEEEEC
T ss_pred EEEECCchh----HHHHHHHhhcCCCEEEEE
Confidence 999888764 344455566666655544
No 415
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=91.61 E-value=0.31 Score=49.63 Aligned_cols=91 Identities=13% Similarity=0.102 Sum_probs=51.9
Q ss_pred CCEEEEEc-ccchHHHHHHH-HHHhhhhhcCCc---EEEEE-ecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEE
Q 012479 111 INQIGVIG-WGSQGPAQAQN-LRDSLAEAKSDI---VVKVG-LRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (462)
Q Consensus 111 ikkIgIIG-~G~mG~AiA~~-Lrds~~~~g~G~---~Vivg-~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViL 184 (462)
|+||+|+| .|.+|.-+.+. |.+. ++ .+... .+...+.........+... ...+.++ .+++|+||.
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~------~~~~v~i~~~~~~s~G~~v~~~~g~~i~~~--~~~~~~~-~~~~DvVf~ 71 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEER------DFDAIRPVFFSTSQLGQAAPSFGGTTGTLQ--DAFDLEA-LKALDIIVT 71 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT------GGGGSEEEEEESSSTTSBCCGGGTCCCBCE--ETTCHHH-HHTCSEEEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcC------CCCeEEEEEEEeCCCCCCccccCCCceEEE--ecCChHH-hcCCCEEEE
Confidence 47999999 99999999994 4433 32 33222 2221111100000111110 0112333 578999999
Q ss_pred eecchhHHHHHHHHHhcCCCCc--EEEEecc
Q 012479 185 LISDAAQADNYEKIFSCMKPNS--ILGLSHG 213 (462)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~ga--iL~~a~G 213 (462)
|+|.....+..+.+.. .|. +|++.++
T Consensus 72 a~g~~~s~~~a~~~~~---~G~k~vVID~ss 99 (367)
T 1t4b_A 72 CQGGDYTNEIYPKLRE---SGWQGYWIDAAS 99 (367)
T ss_dssp CSCHHHHHHHHHHHHH---TTCCCEEEECSS
T ss_pred CCCchhHHHHHHHHHH---CCCCEEEEcCCh
Confidence 9998888877776543 454 6777665
No 416
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=91.60 E-value=0.2 Score=52.96 Aligned_cols=48 Identities=27% Similarity=0.344 Sum_probs=34.0
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcC
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG 161 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G 161 (462)
.++| +++.|+|.|-+|.+++..|.+. |.+|++..|..++..+.+.+.+
T Consensus 361 ~l~~-k~vlV~GaGGig~aia~~L~~~------G~~V~i~~R~~~~a~~la~~~~ 408 (523)
T 2o7s_A 361 PLAS-KTVVVIGAGGAGKALAYGAKEK------GAKVVIANRTYERALELAEAIG 408 (523)
T ss_dssp ------CEEEECCSHHHHHHHHHHHHH------CC-CEEEESSHHHHHHHHHHTT
T ss_pred ccCC-CEEEEECCcHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHcC
Confidence 3677 8999999999999999999998 8888888887555455555443
No 417
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=91.60 E-value=0.57 Score=45.56 Aligned_cols=74 Identities=19% Similarity=0.124 Sum_probs=48.9
Q ss_pred ccCCCCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchh---HHHHH-------HcCceecCCCcCC---H
Q 012479 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS---FAEAR-------AAGFTEENGTLGD---I 172 (462)
Q Consensus 107 ~l~gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s---~~~A~-------~~G~~~~d~~~~~---~ 172 (462)
.+++ |+|.|.|. |.+|.++++.|.+. |.+|++..|..... .+... ..++......+.+ .
T Consensus 24 ~~~~-~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~ 96 (352)
T 1sb8_A 24 PAQP-KVWLITGVAGFIGSNLLETLLKL------DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDC 96 (352)
T ss_dssp HHSC-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHH
T ss_pred CccC-CeEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHH
Confidence 3667 89999997 99999999999998 98888777654321 11111 1333211111223 3
Q ss_pred hhhhccCCeEEEeec
Q 012479 173 YETISGSDLVLLLIS 187 (462)
Q Consensus 173 ~eav~~ADvViLavp 187 (462)
.++++++|+||.+..
T Consensus 97 ~~~~~~~d~vih~A~ 111 (352)
T 1sb8_A 97 NNACAGVDYVLHQAA 111 (352)
T ss_dssp HHHHTTCSEEEECCS
T ss_pred HHHhcCCCEEEECCc
Confidence 467789999999875
No 418
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=91.57 E-value=0.32 Score=47.56 Aligned_cols=93 Identities=15% Similarity=0.144 Sum_probs=61.7
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHH-HHcCcee-cCCCcCCHhhhhc-----cCC
Q 012479 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA-RAAGFTE-ENGTLGDIYETIS-----GSD 180 (462)
Q Consensus 109 ~gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A-~~~G~~~-~d~~~~~~~eav~-----~AD 180 (462)
+| ++|.|+|. |.+|.+.++-++.. |.+|++..++ ++..+.+ ++.|... .|....+..+.+. ..|
T Consensus 149 ~g-~~vlI~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d 220 (336)
T 4b7c_A 149 NG-ETVVISGAAGAVGSVAGQIARLK------GCRVVGIAGG-AEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGID 220 (336)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCce
Confidence 46 89999998 99999999999988 8887766554 4445666 7777631 0111123333332 479
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 012479 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 181 vViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~G 213 (462)
+||-++.. +.++.....++++-.++..+.
T Consensus 221 ~vi~~~g~----~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 221 VFFDNVGG----EILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp EEEESSCH----HHHHHHHTTEEEEEEEEECCC
T ss_pred EEEECCCc----chHHHHHHHHhhCCEEEEEee
Confidence 99988874 356666677777766655543
No 419
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=91.57 E-value=1.1 Score=43.00 Aligned_cols=90 Identities=17% Similarity=0.251 Sum_probs=57.4
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHc----Cc----eecCCCcCCHhhhhccCC
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA----GF----TEENGTLGDIYETISGSD 180 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~----G~----~~~d~~~~~~~eav~~AD 180 (462)
+| .+|.-||||. |.- +..|.+.. |.+| ++.+.++...+.|++. |. ... ..+..+.-...|
T Consensus 90 ~~-~~vLDiGcG~-G~~-~~~la~~~-----~~~v-~gvD~s~~~~~~a~~~~~~~~~~~~v~~~---~~d~~~~~~~fD 157 (318)
T 2fk8_A 90 PG-MTLLDIGCGW-GTT-MRRAVERF-----DVNV-IGLTLSKNQHARCEQVLASIDTNRSRQVL---LQGWEDFAEPVD 157 (318)
T ss_dssp TT-CEEEEESCTT-SHH-HHHHHHHH-----CCEE-EEEESCHHHHHHHHHHHHTSCCSSCEEEE---ESCGGGCCCCCS
T ss_pred Cc-CEEEEEcccc-hHH-HHHHHHHC-----CCEE-EEEECCHHHHHHHHHHHHhcCCCCceEEE---ECChHHCCCCcC
Confidence 46 8999999998 332 33333321 5554 5667666666666553 32 110 234444335689
Q ss_pred eEEEe-----ecchhHHHHHHHHHhcCCCCcEEEE
Q 012479 181 LVLLL-----ISDAAQADNYEKIFSCMKPNSILGL 210 (462)
Q Consensus 181 vViLa-----vpd~a~~~vl~eI~~~Lk~gaiL~~ 210 (462)
+|+.. +++.....+++++...|+||-.+.+
T Consensus 158 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 158 RIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp EEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred EEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 99987 6666778899999999999886553
No 420
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=91.54 E-value=0.48 Score=50.14 Aligned_cols=75 Identities=21% Similarity=0.095 Sum_probs=49.6
Q ss_pred ccccCCCCEEEEEcccchHHH-HHHHHHHhhhhhcCCcEEEEEecCC-chhHHHHHHcCceecCCCcCCHhhhhccCCeE
Q 012479 105 PDAFNGINQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKG-SRSFAEARAAGFTEENGTLGDIYETISGSDLV 182 (462)
Q Consensus 105 ~~~l~gikkIgIIG~G~mG~A-iA~~Lrds~~~~g~G~~Vivg~r~~-~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvV 182 (462)
.-+|++ ++|-|||.|-.|.+ +|+-|++. |.+|.+.+... +...+..++.|+....+ .+.++...++|+|
T Consensus 14 ~~~~~~-~~i~~iGiGg~Gms~lA~~l~~~------G~~V~~sD~~~~~~~~~~L~~~gi~~~~G--~~~~~~~~~~d~v 84 (524)
T 3hn7_A 14 NLYFQG-MHIHILGICGTFMGSLALLARAL------GHTVTGSDANIYPPMSTQLEQAGVTIEEG--YLIAHLQPAPDLV 84 (524)
T ss_dssp -----C-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCCCTTHHHHHHHTTCEEEES--CCGGGGCSCCSEE
T ss_pred ceeecC-CEEEEEEecHhhHHHHHHHHHhC------CCEEEEECCCCCcHHHHHHHHCCCEEECC--CCHHHcCCCCCEE
Confidence 467888 99999999999996 78888888 99988777653 23345556678764211 2334444679999
Q ss_pred EEe--ecc
Q 012479 183 LLL--ISD 188 (462)
Q Consensus 183 iLa--vpd 188 (462)
|+. +|+
T Consensus 85 V~Spgi~~ 92 (524)
T 3hn7_A 85 VVGNAMKR 92 (524)
T ss_dssp EECTTCCT
T ss_pred EECCCcCC
Confidence 984 554
No 421
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=91.53 E-value=0.28 Score=51.86 Aligned_cols=92 Identities=14% Similarity=0.174 Sum_probs=58.2
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCc---EEEEEecCCchhHHHHHHcCceecCCCc--CCH----hhhhccCCeE
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI---VVKVGLRKGSRSFAEARAAGFTEENGTL--GDI----YETISGSDLV 182 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~---~Vivg~r~~~~s~~~A~~~G~~~~d~~~--~~~----~eav~~ADvV 182 (462)
+||.|||+|.||..++..|.++. ++ +|++.+..... .+.....|+......+ .+. ..++++.|+|
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~~-----dv~~~~I~vaD~~~~~-~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvV 87 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEKF-----DIKPSQVTIIAAEGTK-VDVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFL 87 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHB-----CCCGGGEEEEESSCCS-CCHHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCC-----CCceeEEEEeccchhh-hhHHhhcCCceeEEeccchhHHHHHHHHhcCCCEE
Confidence 57999999999999999998761 33 56666544322 2333444643211111 222 3456667999
Q ss_pred EEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 183 LLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 183 iLavpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
|.+.++.....+++... ..|....+.+
T Consensus 88 IN~s~~~~~l~Im~acl---eaGv~YlDTa 114 (480)
T 2ph5_A 88 IDVSIGISSLALIILCN---QKGALYINAA 114 (480)
T ss_dssp EECCSSSCHHHHHHHHH---HHTCEEEESS
T ss_pred EECCccccCHHHHHHHH---HcCCCEEECC
Confidence 99999988877777543 2465556655
No 422
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=91.52 E-value=0.51 Score=46.48 Aligned_cols=92 Identities=17% Similarity=0.061 Sum_probs=59.3
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCcee-cCCC-cCCHhhhhc-----cCC
Q 012479 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE-ENGT-LGDIYETIS-----GSD 180 (462)
Q Consensus 109 ~gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~-~d~~-~~~~~eav~-----~AD 180 (462)
+| ++|.|+|. |.+|.+.++.++.. |.+|++..++.. ..+.+++.|... .|-. ..+..+.++ ..|
T Consensus 169 ~g-~~vlV~Ga~ggiG~~~~~~a~~~------Ga~V~~~~~~~~-~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D 240 (347)
T 2hcy_A 169 AG-HWVAISGAAGGLGSLAVQYAKAM------GYRVLGIDGGEG-KEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAH 240 (347)
T ss_dssp TT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECSTT-HHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEE
T ss_pred CC-CEEEEECCCchHHHHHHHHHHHC------CCcEEEEcCCHH-HHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCC
Confidence 56 89999999 89999999999988 888776665543 456777777531 0111 123333333 478
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 012479 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 181 vViLavpd~a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
+||.++... ..++...+.|+++-.++..
T Consensus 241 ~vi~~~g~~---~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 241 GVINVSVSE---AAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp EEEECSSCH---HHHHHHTTSEEEEEEEEEC
T ss_pred EEEECCCcH---HHHHHHHHHHhcCCEEEEE
Confidence 888887642 3455556666665554443
No 423
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=91.49 E-value=0.49 Score=47.10 Aligned_cols=71 Identities=14% Similarity=0.046 Sum_probs=51.0
Q ss_pred cccCCCCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCch-hHHHHHHcCceecCCCcCCHhhhhccCCeEE
Q 012479 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR-SFAEARAAGFTEENGTLGDIYETISGSDLVL 183 (462)
Q Consensus 106 ~~l~gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~-s~~~A~~~G~~~~d~~~~~~~eav~~ADvVi 183 (462)
..|+| .||++||= +++.+|++..+..- |.++.+...+.-. ..+.....++.. +.+++|++++||+|+
T Consensus 150 g~l~g-l~ia~vGD~~rva~Sl~~~~~~~------g~~v~~~~P~~~~~~~~~~~~~~~~~----~~d~~eav~~aDvvy 218 (301)
T 2ef0_A 150 GGLAG-LEVAWVGDGNNVLNSLLEVAPLA------GLKVRVATPKGYEPDPGLLKRANAFF----THDPKEAALGAHALY 218 (301)
T ss_dssp SCCTT-CEEEEESCCCHHHHHHHHHHHHH------TCEEEEECCTTCCCCHHHHHHHTCEE----ESCHHHHHTTCSEEE
T ss_pred CCcCC-cEEEEECCCchhHHHHHHHHHHc------CCEEEEECCchhcCCHHHHhhceeEE----ECCHHHHhcCCCEEE
Confidence 35789 99999997 79999999999888 9888776543211 111111123554 578999999999999
Q ss_pred Eeec
Q 012479 184 LLIS 187 (462)
Q Consensus 184 Lavp 187 (462)
..+=
T Consensus 219 ~~~~ 222 (301)
T 2ef0_A 219 TDVW 222 (301)
T ss_dssp ECCC
T ss_pred ecCc
Confidence 8554
No 424
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=91.47 E-value=0.24 Score=46.73 Aligned_cols=66 Identities=15% Similarity=0.174 Sum_probs=45.0
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCC---Hhhhhcc-CCeEEEeec
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISG-SDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~---~~eav~~-ADvViLavp 187 (462)
|+|.|+|.|.+|..++..|.+. |++|++..|..++. ..++........+ ..+++++ +|+||.+..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~------g~~V~~~~r~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQ------GHEVTGLRRSAQPM-----PAGVQTLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEECTTSCC-----CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CcEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCcccc-----ccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 8999999999999999999998 99888777764431 1222110011222 3446666 999998875
Q ss_pred c
Q 012479 188 D 188 (462)
Q Consensus 188 d 188 (462)
+
T Consensus 73 ~ 73 (286)
T 3gpi_A 73 A 73 (286)
T ss_dssp H
T ss_pred C
Confidence 3
No 425
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=91.42 E-value=0.36 Score=47.60 Aligned_cols=94 Identities=14% Similarity=0.186 Sum_probs=60.1
Q ss_pred CCCCEEEEE-cccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhc-----cCCeE
Q 012479 109 NGINQIGVI-GWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-----GSDLV 182 (462)
Q Consensus 109 ~gikkIgII-G~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~-----~ADvV 182 (462)
+| ++|.|+ |.|.+|.+.++-++.. |.+|++..+ +++..+.+++.|....-....+..+.++ ..|+|
T Consensus 150 ~g-~~VlV~gg~G~vG~~a~qla~~~------Ga~Vi~~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv 221 (346)
T 3fbg_A 150 EG-KTLLIINGAGGVGSIATQIAKAY------GLRVITTAS-RNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYV 221 (346)
T ss_dssp TT-CEEEEESTTSHHHHHHHHHHHHT------TCEEEEECC-SHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEE
T ss_pred CC-CEEEEEcCCCHHHHHHHHHHHHc------CCEEEEEeC-CHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEE
Confidence 68 999999 7999999999999988 888765544 4556788888886321000112333332 47999
Q ss_pred EEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 012479 183 LLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 183 iLavpd~a~~~vl~eI~~~Lk~gaiL~~a~G 213 (462)
+-++.... .++.....++++-.++..++
T Consensus 222 ~d~~g~~~---~~~~~~~~l~~~G~iv~~~~ 249 (346)
T 3fbg_A 222 FCTFNTDM---YYDDMIQLVKPRGHIATIVA 249 (346)
T ss_dssp EESSCHHH---HHHHHHHHEEEEEEEEESSC
T ss_pred EECCCchH---HHHHHHHHhccCCEEEEECC
Confidence 98877432 33444455666655544443
No 426
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=91.42 E-value=0.38 Score=47.88 Aligned_cols=93 Identities=15% Similarity=0.111 Sum_probs=61.2
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceec-CCCcCCHhhhhc-----cCCe
Q 012479 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS-----GSDL 181 (462)
Q Consensus 109 ~gikkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~eav~-----~ADv 181 (462)
.| ++|.|+| .|.+|...++-++.. |.+|++..+. .+..+.+++.|.... +....+..+.++ ..|+
T Consensus 163 ~g-~~VlV~Ga~G~iG~~~~q~a~~~------Ga~Vi~~~~~-~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~ 234 (362)
T 2c0c_A 163 EG-KKVLVTAAAGGTGQFAMQLSKKA------KCHVIGTCSS-DEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDV 234 (362)
T ss_dssp TT-CEEEETTTTBTTHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEE
T ss_pred CC-CEEEEeCCCcHHHHHHHHHHHhC------CCEEEEEECC-HHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCE
Confidence 46 8999999 799999999999988 8887665554 445677888886320 111123333332 4799
Q ss_pred EEEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 012479 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 182 ViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~G 213 (462)
||-++... .++.....++++-.++..+.
T Consensus 235 vid~~g~~----~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 235 VYESVGGA----MFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp EEECSCTH----HHHHHHHHEEEEEEEEECCC
T ss_pred EEECCCHH----HHHHHHHHHhcCCEEEEEeC
Confidence 99998863 44555566666655555443
No 427
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=91.32 E-value=0.19 Score=50.47 Aligned_cols=69 Identities=22% Similarity=0.138 Sum_probs=44.8
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCc-hhHHHHHHcCceecCCCcCC---HhhhhccCCe
Q 012479 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGD---IYETISGSDL 181 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~-~s~~~A~~~G~~~~d~~~~~---~~eav~~ADv 181 (462)
..+.| +||+|||.|..|..+++.+++. |+++++.+.... .....+ +.... ....+ +.+.++++|+
T Consensus 10 ~~~~~-k~IlIlG~G~~g~~la~aa~~~------G~~vi~~d~~~~~~~~~~a--d~~~~--~~~~d~~~l~~~~~~~dv 78 (389)
T 3q2o_A 10 IILPG-KTIGIIGGGQLGRMMALAAKEM------GYKIAVLDPTKNSPCAQVA--DIEIV--ASYDDLKAIQHLAEISDV 78 (389)
T ss_dssp CCCTT-SEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSTTCTTTTTC--SEEEE--CCTTCHHHHHHHHHTCSE
T ss_pred cCCCC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEeCCCCCchHHhC--CceEe--cCcCCHHHHHHHHHhCCE
Confidence 44678 9999999999999999999998 998877654321 111111 11111 01223 4567788998
Q ss_pred EEEe
Q 012479 182 VLLL 185 (462)
Q Consensus 182 ViLa 185 (462)
|...
T Consensus 79 I~~~ 82 (389)
T 3q2o_A 79 VTYE 82 (389)
T ss_dssp EEES
T ss_pred eeec
Confidence 7543
No 428
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=91.28 E-value=0.4 Score=47.08 Aligned_cols=93 Identities=17% Similarity=0.127 Sum_probs=59.2
Q ss_pred cCCCCEEEEEccc-chHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceec-CCCcCCHhhhh------ccC
Q 012479 108 FNGINQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGS 179 (462)
Q Consensus 108 l~gikkIgIIG~G-~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~eav------~~A 179 (462)
-+| ++|.|+|.| .+|.+.++-++.. |.+|++..++. +..+.+++.|.... +....+..+.+ ...
T Consensus 143 ~~g-~~VlV~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~~-~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~ 214 (340)
T 3gms_A 143 QRN-DVLLVNACGSAIGHLFAQLSQIL------NFRLIAVTRNN-KHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGA 214 (340)
T ss_dssp CTT-CEEEESSTTSHHHHHHHHHHHHH------TCEEEEEESSS-TTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCC-CEEEEeCCccHHHHHHHHHHHHc------CCEEEEEeCCH-HHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCC
Confidence 356 899999998 8999999999988 88877666554 45677888776320 11112233322 257
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 180 DvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
|+||-++......+. ...++++-.++..+
T Consensus 215 Dvvid~~g~~~~~~~----~~~l~~~G~iv~~G 243 (340)
T 3gms_A 215 DAAIDSIGGPDGNEL----AFSLRPNGHFLTIG 243 (340)
T ss_dssp EEEEESSCHHHHHHH----HHTEEEEEEEEECC
T ss_pred cEEEECCCChhHHHH----HHHhcCCCEEEEEe
Confidence 888888875544332 24566665555443
No 429
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=91.23 E-value=0.4 Score=50.01 Aligned_cols=93 Identities=17% Similarity=0.266 Sum_probs=66.4
Q ss_pred ccCCCCEEEEEccc----------chHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHH-c-CceecCCCcCCHhh
Q 012479 107 AFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-A-GFTEENGTLGDIYE 174 (462)
Q Consensus 107 ~l~gikkIgIIG~G----------~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~-~-G~~~~d~~~~~~~e 174 (462)
.++| +||+|+|+- +-...++..|.+. |.+|.+.+..- .+.+++ . ++.. +.+.++
T Consensus 319 ~~~~-~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~------g~~v~~~DP~~---~~~~~~~~~~~~~----~~~~~~ 384 (446)
T 4a7p_A 319 DVRG-KTVGILGLTFKPNTDDMRDAPSLSIIAALQDA------GATVKAYDPEG---VEQASKMLTDVEF----VENPYA 384 (446)
T ss_dssp CCTT-CEEEEECCSSSTTSCCCTTCSHHHHHHHHHHT------SCEEEEECSSC---HHHHGGGCSSCCB----CSCHHH
T ss_pred cCCC-CEEEEEEEEeCCCCcccccChHHHHHHHHHHC------CCEEEEECCCC---CHhHHHhcCCceE----ecChhH
Confidence 4788 999999997 7788999999998 99887765432 223322 2 4442 467889
Q ss_pred hhccCCeEEEeecchhHHH-HHHHHHhcCCCCcEEEEeccc
Q 012479 175 TISGSDLVLLLISDAAQAD-NYEKIFSCMKPNSILGLSHGF 214 (462)
Q Consensus 175 av~~ADvViLavpd~a~~~-vl~eI~~~Lk~gaiL~~a~G~ 214 (462)
++++||+|+++|.-....+ =++.+...|+. .+|.|.-++
T Consensus 385 ~~~~ad~vvi~t~~~~f~~~d~~~~~~~~~~-~~i~D~r~~ 424 (446)
T 4a7p_A 385 AADGADALVIVTEWDAFRALDLTRIKNSLKS-PVLVDLRNI 424 (446)
T ss_dssp HHTTBSEEEECSCCTTTTSCCHHHHHTTBSS-CBEECSSCC
T ss_pred HhcCCCEEEEeeCCHHhhcCCHHHHHHhcCC-CEEEECCCC
Confidence 9999999999998665543 24567776754 567777664
No 430
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=91.21 E-value=0.54 Score=46.98 Aligned_cols=73 Identities=11% Similarity=0.071 Sum_probs=52.2
Q ss_pred cccCCCCEEEEEcc---cchHHHHHHHHHHhhhhhcCCcEEEEEecC----CchhHHHHHHcCceecCCCcCCHhhhhcc
Q 012479 106 DAFNGINQIGVIGW---GSQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFAEARAAGFTEENGTLGDIYETISG 178 (462)
Q Consensus 106 ~~l~gikkIgIIG~---G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~----~~~s~~~A~~~G~~~~d~~~~~~~eav~~ 178 (462)
..|+| .||++||= +++.+|++..+..- .|.++.+...+ +....+.+++.|.... .+.+++|++++
T Consensus 150 g~l~g-l~va~vGD~~~~rva~Sl~~~~~~~-----~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~--~~~d~~eav~~ 221 (310)
T 3csu_A 150 GRLDN-LHVAMVGDLKYGRTVHSLTQALAKF-----DGNRFYFIAPDALAMPQYILDMLDEKGIAWS--LHSSIEEVMAE 221 (310)
T ss_dssp SCSSS-CEEEEESCTTTCHHHHHHHHHHHTS-----SSCEEEEECCGGGCCCHHHHHHHHHTTCCEE--ECSCGGGTTTT
T ss_pred CCcCC-cEEEEECCCCCCchHHHHHHHHHhC-----CCCEEEEECCcccccCHHHHHHHHHcCCeEE--EEcCHHHHhcC
Confidence 35789 99999997 58999999988653 16777766443 2233466667775310 15789999999
Q ss_pred CCeEEEee
Q 012479 179 SDLVLLLI 186 (462)
Q Consensus 179 ADvViLav 186 (462)
||+|+...
T Consensus 222 aDvvyt~~ 229 (310)
T 3csu_A 222 VDILYMTR 229 (310)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 99999865
No 431
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.18 E-value=0.2 Score=50.16 Aligned_cols=90 Identities=19% Similarity=0.257 Sum_probs=58.4
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceec-CCCcCC---HhhhhccCCeEEE
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGD---IYETISGSDLVLL 184 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~---~~eav~~ADvViL 184 (462)
.| .+|.|+|.|.+|...++-++.. |.+|++..++ ++..+.+++.|.... + ..+ .+++....|+||-
T Consensus 194 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~Vi~~~~~-~~~~~~a~~lGa~~vi~--~~~~~~~~~~~~g~Dvvid 263 (369)
T 1uuf_A 194 PG-KKVGVVGIGGLGHMGIKLAHAM------GAHVVAFTTS-EAKREAAKALGADEVVN--SRNADEMAAHLKSFDFILN 263 (369)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESS-GGGHHHHHHHTCSEEEE--TTCHHHHHTTTTCEEEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCcEEec--cccHHHHHHhhcCCCEEEE
Confidence 46 8999999999999999999888 8886555544 455778888886320 1 111 1222346799999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEEEEe
Q 012479 185 LISDAAQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
++.... .+++....++++-.++..
T Consensus 264 ~~g~~~---~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 264 TVAAPH---NLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp CCSSCC---CHHHHHTTEEEEEEEEEC
T ss_pred CCCCHH---HHHHHHHHhccCCEEEEe
Confidence 887532 233444556665555444
No 432
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=91.18 E-value=0.23 Score=49.36 Aligned_cols=92 Identities=20% Similarity=0.191 Sum_probs=59.3
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceec-CCCcC-CHhhhh-ccCCeEEEe
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLG-DIYETI-SGSDLVLLL 185 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~-~~~eav-~~ADvViLa 185 (462)
+| .+|.|+|.|.+|...++-++.. |.+|++..++ ++..+.+++.|.... +.... +..+.+ ...|+||-+
T Consensus 179 ~g-~~VlV~GaG~vG~~~~qlak~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~ 250 (360)
T 1piw_A 179 PG-KKVGIVGLGGIGSMGTLISKAM------GAETYVISRS-SRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVC 250 (360)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------TCEEEEEESS-STTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEEC
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCC-HHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEEC
Confidence 56 8999999999999999999988 8886655544 445778888886320 10011 222333 368999999
Q ss_pred ecc--hhHHHHHHHHHhcCCCCcEEEEe
Q 012479 186 ISD--AAQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 186 vpd--~a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
+.. .. .+++..+.++++-.++..
T Consensus 251 ~g~~~~~---~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 251 ASSLTDI---DFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp CSCSTTC---CTTTGGGGEEEEEEEEEC
T ss_pred CCCCcHH---HHHHHHHHhcCCCEEEEe
Confidence 875 21 233445566666555443
No 433
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=91.17 E-value=0.54 Score=44.51 Aligned_cols=39 Identities=15% Similarity=0.124 Sum_probs=32.8
Q ss_pred ccCCCCEEEEEccc---chHHHHHHHHHHhhhhhcCCcEEEEEecCCch
Q 012479 107 AFNGINQIGVIGWG---SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR 152 (462)
Q Consensus 107 ~l~gikkIgIIG~G---~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~ 152 (462)
.|+| |++-|-|.+ -+|.++|+.|.+. |.+|++..|+...
T Consensus 3 ~l~g-K~alVTGaa~~~GIG~aiA~~la~~------Ga~Vvi~~r~~~~ 44 (256)
T 4fs3_A 3 NLEN-KTYVIMGIANKRSIAFGVAKVLDQL------GAKLVFTYRKERS 44 (256)
T ss_dssp CCTT-CEEEEECCCSTTCHHHHHHHHHHHT------TCEEEEEESSGGG
T ss_pred CCCC-CEEEEECCCCCchHHHHHHHHHHHC------CCEEEEEECCHHH
Confidence 4789 999999975 3999999999999 9999888876443
No 434
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=91.16 E-value=0.39 Score=46.82 Aligned_cols=93 Identities=17% Similarity=0.154 Sum_probs=64.1
Q ss_pred cCCCCEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCcee-cCCCcCC-HhhhhccCCeEEE
Q 012479 108 FNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE-ENGTLGD-IYETISGSDLVLL 184 (462)
Q Consensus 108 l~gikkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~-~d~~~~~-~~eav~~ADvViL 184 (462)
-+| .+|.|+| .|.+|...++-++.. |.+|++.. . .+..+.+++.|... .+....+ ..+.++..|+||-
T Consensus 151 ~~g-~~vlV~Ga~G~vG~~a~q~a~~~------Ga~vi~~~-~-~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d 221 (321)
T 3tqh_A 151 KQG-DVVLIHAGAGGVGHLAIQLAKQK------GTTVITTA-S-KRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVID 221 (321)
T ss_dssp CTT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEE-C-HHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEE
T ss_pred CCC-CEEEEEcCCcHHHHHHHHHHHHc------CCEEEEEe-c-cchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEE
Confidence 356 8999997 999999999999988 88876554 3 33478888888742 0111223 5566678999999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEEEEecc
Q 012479 185 LISDAAQADNYEKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~gaiL~~a~G 213 (462)
++..... .+....++++-.++..+.
T Consensus 222 ~~g~~~~----~~~~~~l~~~G~iv~~g~ 246 (321)
T 3tqh_A 222 LVGGDVG----IQSIDCLKETGCIVSVPT 246 (321)
T ss_dssp SSCHHHH----HHHGGGEEEEEEEEECCS
T ss_pred CCCcHHH----HHHHHhccCCCEEEEeCC
Confidence 9885433 445566777666555543
No 435
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.13 E-value=1.2 Score=46.48 Aligned_cols=95 Identities=19% Similarity=0.171 Sum_probs=63.3
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcC-ceecCCCcCC----HhhhhccCCeEEEee
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-FTEENGTLGD----IYETISGSDLVLLLI 186 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G-~~~~d~~~~~----~~eav~~ADvViLav 186 (462)
++|.|+|.|++|..+|+.|.+ .++|.+-.+...+....|++.- ..+-.+...+ .++-+.++|+++-+|
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~~-------~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T 308 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLEQ-------TYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVDVFIALT 308 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------TSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSEEEECC
T ss_pred cEEEEEcchHHHHHHHHHhhh-------cCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhcEEEEcc
Confidence 789999999999999999854 4677777666556556666542 2211222223 234589999999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEecc
Q 012479 187 SDAAQADNYEKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~gaiL~~a~G 213 (462)
.++..-=+..-++..+...+++..+.-
T Consensus 309 ~~De~Ni~~~llAk~~gv~kvIa~vn~ 335 (461)
T 4g65_A 309 NEDETNIMSAMLAKRMGAKKVMVLIQR 335 (461)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred cCcHHHHHHHHHHHHcCCccccccccc
Confidence 987654444456666666667765543
No 436
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=91.06 E-value=0.2 Score=50.22 Aligned_cols=90 Identities=11% Similarity=0.075 Sum_probs=54.3
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhc-CCcEEEEEecCCc--hhHHHHHHcCceecCCCcCCH-hhhhccCCeEEEee
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAK-SDIVVKVGLRKGS--RSFAEARAAGFTEENGTLGDI-YETISGSDLVLLLI 186 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g-~G~~Vivg~r~~~--~s~~~A~~~G~~~~d~~~~~~-~eav~~ADvViLav 186 (462)
+||+|+| .|.+|..+.+.|.++ + ..++++...+..+ +... -.|... .+.+. .+..+++|+||+|+
T Consensus 4 ~kV~I~GAtG~iG~~llr~L~~~----~~p~~elv~i~s~~~~G~~~~---~~~~~i---~~~~~~~~~~~~vDvVf~a~ 73 (336)
T 2r00_A 4 FNVAIFGATGAVGETMLEVLQER----EFPVDELFLLASERSEGKTYR---FNGKTV---RVQNVEEFDWSQVHIALFSA 73 (336)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT----TCCEEEEEEEECTTTTTCEEE---ETTEEE---EEEEGGGCCGGGCSEEEECS
T ss_pred cEEEEECCCCHHHHHHHHHHhcC----CCCCEEEEEEECCCCCCCcee---ecCcee---EEecCChHHhcCCCEEEECC
Confidence 7899999 999999999988765 0 0235444332211 1000 011110 01111 22446899999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEeccc
Q 012479 187 SDAAQADNYEKIFSCMKPNSILGLSHGF 214 (462)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~gaiL~~a~G~ 214 (462)
|.....+..+.+. +.|..+++.++-
T Consensus 74 g~~~s~~~a~~~~---~~G~~vId~s~~ 98 (336)
T 2r00_A 74 GGELSAKWAPIAA---EAGVVVIDNTSH 98 (336)
T ss_dssp CHHHHHHHHHHHH---HTTCEEEECSST
T ss_pred CchHHHHHHHHHH---HcCCEEEEcCCc
Confidence 9988777776543 467777777663
No 437
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=91.05 E-value=0.52 Score=46.00 Aligned_cols=92 Identities=17% Similarity=0.156 Sum_probs=59.4
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCcee-cCCCc-CCHhhhhc-----cCC
Q 012479 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE-ENGTL-GDIYETIS-----GSD 180 (462)
Q Consensus 109 ~gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~-~d~~~-~~~~eav~-----~AD 180 (462)
+| ++|.|+|. |.+|.+.++.++.. |.+|++..++ ....+.+++.|... .|-.. .+..+.+. ..|
T Consensus 145 ~g-~~vlV~Ga~ggiG~~~~~~~~~~------G~~V~~~~~~-~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d 216 (333)
T 1v3u_A 145 GG-ETVLVSAAAGAVGSVVGQIAKLK------GCKVVGAAGS-DEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYD 216 (333)
T ss_dssp SS-CEEEEESTTBHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEE
T ss_pred CC-CEEEEecCCCcHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCe
Confidence 46 89999998 99999999999988 8887766554 44456667777521 01111 23333332 468
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 181 vViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
+||.++... .+++....++++-.++..+
T Consensus 217 ~vi~~~g~~----~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 217 CYFDNVGGE----FLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp EEEESSCHH----HHHHHHTTEEEEEEEEECC
T ss_pred EEEECCChH----HHHHHHHHHhcCCEEEEEe
Confidence 888887743 3555566677766555443
No 438
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=91.03 E-value=0.24 Score=49.48 Aligned_cols=89 Identities=19% Similarity=0.156 Sum_probs=56.4
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHH-HcCceec-CCCcCC---HhhhhccCCeEE
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AAGFTEE-NGTLGD---IYETISGSDLVL 183 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~-~~G~~~~-d~~~~~---~~eav~~ADvVi 183 (462)
.| .+|.|+|.|.+|...++-++.. |.+|++..+.. ...+.+. +.|.... | ..+ ..++....|+||
T Consensus 187 ~g-~~VlV~GaG~vG~~~~q~a~~~------Ga~Vi~~~~~~-~~~~~~~~~lGa~~v~~--~~~~~~~~~~~~~~D~vi 256 (366)
T 1yqd_A 187 PG-KHIGIVGLGGLGHVAVKFAKAF------GSKVTVISTSP-SKKEEALKNFGADSFLV--SRDQEQMQAAAGTLDGII 256 (366)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCG-GGHHHHHHTSCCSEEEE--TTCHHHHHHTTTCEEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCH-HHHHHHHHhcCCceEEe--ccCHHHHHHhhCCCCEEE
Confidence 67 8999999999999999999988 88876665543 3455555 6775310 1 112 223334679999
Q ss_pred Eeecch-hHHHHHHHHHhcCCCCcEEEEe
Q 012479 184 LLISDA-AQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 184 Lavpd~-a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
-++... .....+ +.|+++-.++..
T Consensus 257 d~~g~~~~~~~~~----~~l~~~G~iv~~ 281 (366)
T 1yqd_A 257 DTVSAVHPLLPLF----GLLKSHGKLILV 281 (366)
T ss_dssp ECCSSCCCSHHHH----HHEEEEEEEEEC
T ss_pred ECCCcHHHHHHHH----HHHhcCCEEEEE
Confidence 988743 333333 344554444433
No 439
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=91.01 E-value=0.55 Score=48.17 Aligned_cols=88 Identities=15% Similarity=0.172 Sum_probs=55.0
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcCC-cEEE-EE-ec-CCchhHHHH-------------HHcCceecCCCcCCHh
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSD-IVVK-VG-LR-KGSRSFAEA-------------RAAGFTEENGTLGDIY 173 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~G-~~Vi-vg-~r-~~~~s~~~A-------------~~~G~~~~d~~~~~~~ 173 (462)
.|||||| .|..|.-+.+-|.+. . +++. +. .+ ...+..... .+.-+.. .+.+
T Consensus 20 ~kVaIvGAtG~vG~ell~lL~~h------p~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~-----~~~~ 88 (381)
T 3hsk_A 20 KKAGVLGATGSVGQRFILLLSKH------PEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQE-----CKPE 88 (381)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC------SSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEE-----SSSC
T ss_pred cEEEEECCCChHHHHHHHHHHcC------CCceEEEeeccccccCCCHHHhcccccccccccccccceEEe-----Cchh
Confidence 6899999 699999999877654 3 3543 22 22 222333221 1111111 1222
Q ss_pred hhhccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 012479 174 ETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 174 eav~~ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~G 213 (462)
+.++++|+||+|+|.....++.+++. +.|..|+|.++
T Consensus 89 ~~~~~~Dvvf~alp~~~s~~~~~~~~---~~G~~VIDlSa 125 (381)
T 3hsk_A 89 GNFLECDVVFSGLDADVAGDIEKSFV---EAGLAVVSNAK 125 (381)
T ss_dssp TTGGGCSEEEECCCHHHHHHHHHHHH---HTTCEEEECCS
T ss_pred hhcccCCEEEECCChhHHHHHHHHHH---hCCCEEEEcCC
Confidence 24678999999999988888887764 46877887766
No 440
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=90.89 E-value=0.53 Score=48.64 Aligned_cols=71 Identities=15% Similarity=0.133 Sum_probs=50.0
Q ss_pred ccCCCCEEEEEcc-----c---chHHHHHHHHHHhhhhhcCCcEEEEEecC----CchhHH----HHHHcCceecCCCcC
Q 012479 107 AFNGINQIGVIGW-----G---SQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFA----EARAAGFTEENGTLG 170 (462)
Q Consensus 107 ~l~gikkIgIIG~-----G---~mG~AiA~~Lrds~~~~g~G~~Vivg~r~----~~~s~~----~A~~~G~~~~d~~~~ 170 (462)
-|+| +||+|||. | ++..|++..+..- |.++.+.... .+...+ .|++.|.... .+.
T Consensus 188 ~l~G-lkva~vgd~~~~~G~~nnVa~Sli~~~~~l------G~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~--~~~ 258 (399)
T 3q98_A 188 NLKG-KKIAMTWAYSPSYGKPLSVPQGIIGLMTRF------GMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFR--QVT 258 (399)
T ss_dssp GGTT-CEEEEECCCCSSCCCCTHHHHHHHHHHGGG------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEE--EES
T ss_pred ccCC-CEEEEEEecccccCcchHHHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEE--EEc
Confidence 4788 99999984 4 7889999988877 8888776543 222233 2345564210 157
Q ss_pred CHhhhhccCCeEEEee
Q 012479 171 DIYETISGSDLVLLLI 186 (462)
Q Consensus 171 ~~~eav~~ADvViLav 186 (462)
+++|++++||+|+.-+
T Consensus 259 d~~eav~~aDvVytd~ 274 (399)
T 3q98_A 259 SMEEAFKDADIVYPKS 274 (399)
T ss_dssp CHHHHHTTCSEEEECC
T ss_pred CHHHHhCCCCEEEecC
Confidence 8999999999998765
No 441
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=90.86 E-value=0.35 Score=47.90 Aligned_cols=92 Identities=18% Similarity=0.224 Sum_probs=59.9
Q ss_pred CCCCEEEEE-cccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceec-CCCcCCHhhhhc-----cCCe
Q 012479 109 NGINQIGVI-GWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS-----GSDL 181 (462)
Q Consensus 109 ~gikkIgII-G~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~eav~-----~ADv 181 (462)
.| ++|.|+ |.|.+|.+.++.++.. |.+|++..++ .+..+.+++.|.... +....+..+.+. ..|+
T Consensus 167 ~g-~~VlV~Gg~g~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dv 238 (353)
T 4dup_A 167 EG-ESVLIHGGTSGIGTTAIQLARAF------GAEVYATAGS-TGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDI 238 (353)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEE
T ss_pred CC-CEEEEEcCCCHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceE
Confidence 46 899999 6899999999999988 9887666554 445677787776320 111123333332 4799
Q ss_pred EEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 182 ViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
||-++.... ++.....++++-.++..+
T Consensus 239 vid~~g~~~----~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 239 ILDMIGAAY----FERNIASLAKDGCLSIIA 265 (353)
T ss_dssp EEESCCGGG----HHHHHHTEEEEEEEEECC
T ss_pred EEECCCHHH----HHHHHHHhccCCEEEEEE
Confidence 998888653 344445566665555443
No 442
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=90.84 E-value=0.28 Score=48.48 Aligned_cols=76 Identities=16% Similarity=0.093 Sum_probs=48.9
Q ss_pred cccCCCCEEEEEcc-cchHHHHHHHHHHhhhhhcCC-cEEEEEecCCchhHHHHH-HcCceecCCCcCC---HhhhhccC
Q 012479 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEAR-AAGFTEENGTLGD---IYETISGS 179 (462)
Q Consensus 106 ~~l~gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G-~~Vivg~r~~~~s~~~A~-~~G~~~~d~~~~~---~~eav~~A 179 (462)
..+++ |+|.|.|. |.+|.++++.|.+. | .+|++..|......+... ..++......+.+ ..++++++
T Consensus 28 ~~~~~-~~ilVtGatG~iG~~l~~~L~~~------g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~ 100 (377)
T 2q1s_A 28 SKLAN-TNVMVVGGAGFVGSNLVKRLLEL------GVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEY 100 (377)
T ss_dssp GGGTT-CEEEEETTTSHHHHHHHHHHHHT------TCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCC
T ss_pred HHhCC-CEEEEECCccHHHHHHHHHHHHc------CCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCC
Confidence 45788 99999995 99999999999998 9 888777665332211110 1222211111223 34567789
Q ss_pred CeEEEeecc
Q 012479 180 DLVLLLISD 188 (462)
Q Consensus 180 DvViLavpd 188 (462)
|+||.+...
T Consensus 101 d~Vih~A~~ 109 (377)
T 2q1s_A 101 DYVFHLATY 109 (377)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCc
Confidence 999988653
No 443
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=90.79 E-value=0.49 Score=46.87 Aligned_cols=92 Identities=15% Similarity=0.113 Sum_probs=58.2
Q ss_pred cCCCCEEEEEcccchHHHH-HHHH-HHhhhhhcCCcE-EEEEecCCch---hHHHHHHcCceecCCCcCCHhhhhc----
Q 012479 108 FNGINQIGVIGWGSQGPAQ-AQNL-RDSLAEAKSDIV-VKVGLRKGSR---SFAEARAAGFTEENGTLGDIYETIS---- 177 (462)
Q Consensus 108 l~gikkIgIIG~G~mG~Ai-A~~L-rds~~~~g~G~~-Vivg~r~~~~---s~~~A~~~G~~~~d~~~~~~~eav~---- 177 (462)
+++ .+|.|+|.|.+|... ++-+ +.. |.+ |++..+. ++ ..+.+++.|....+....+..+ +.
T Consensus 171 ~~~-~~VlV~GaG~vG~~a~iqla~k~~------Ga~~Vi~~~~~-~~~~~~~~~~~~lGa~~v~~~~~~~~~-i~~~~g 241 (357)
T 2b5w_A 171 WDP-SSAFVLGNGSLGLLTLAMLKVDDK------GYENLYCLGRR-DRPDPTIDIIEELDATYVDSRQTPVED-VPDVYE 241 (357)
T ss_dssp CCC-CEEEEECCSHHHHHHHHHHHHCTT------CCCEEEEEECC-CSSCHHHHHHHHTTCEEEETTTSCGGG-HHHHSC
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHHHc------CCcEEEEEeCC-cccHHHHHHHHHcCCcccCCCccCHHH-HHHhCC
Confidence 345 899999999999999 8888 766 876 6665554 33 4778888897531111112233 32
Q ss_pred cCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 012479 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 178 ~ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
..|+||-++.... .+++....++++-.++..
T Consensus 242 g~Dvvid~~g~~~---~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 242 QMDFIYEATGFPK---HAIQSVQALAPNGVGALL 272 (357)
T ss_dssp CEEEEEECSCCHH---HHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEECCCChH---HHHHHHHHHhcCCEEEEE
Confidence 4799998887532 334444555665555444
No 444
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=90.71 E-value=0.25 Score=51.35 Aligned_cols=35 Identities=20% Similarity=0.328 Sum_probs=30.9
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHH-hhhhhcCCcEEEEEecC
Q 012479 108 FNGINQIGVIGWGSQGPAQAQNLRD-SLAEAKSDIVVKVGLRK 149 (462)
Q Consensus 108 l~gikkIgIIG~G~mG~AiA~~Lrd-s~~~~g~G~~Vivg~r~ 149 (462)
|+| ++|+|+|+|++|..+|+.|+. . |.+|+...+.
T Consensus 210 l~g-ktvgI~G~G~VG~~vA~~l~~~~------G~kVv~~sD~ 245 (419)
T 1gtm_A 210 LKG-KTIAIQGYGNAGYYLAKIMSEDF------GMKVVAVSDS 245 (419)
T ss_dssp STT-CEEEEECCSHHHHHHHHHHHHTT------CCEEEEEECS
T ss_pred cCC-CEEEEEcCCHHHHHHHHHHHHhc------CCEEEEEeCC
Confidence 899 999999999999999999998 7 9887755454
No 445
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=90.66 E-value=0.53 Score=46.16 Aligned_cols=64 Identities=19% Similarity=0.210 Sum_probs=43.5
Q ss_pred ccccccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhcc
Q 012479 99 DLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISG 178 (462)
Q Consensus 99 ~~f~~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ 178 (462)
+.|....+..+| +||++||+ + +.+...+ .. +.++.|.+++.. .|... ....++++++
T Consensus 130 d~~~~~~~~~~g-~kV~vIG~--~-P~i~~~l-~~------~~~v~V~d~~p~--------~g~~p----~~~~e~ll~~ 186 (270)
T 2h1q_A 130 DPFIMSQNEVKG-KKVGVVGH--F-PHLESLL-EP------ICDLSILEWSPE--------EGDYP----LPASEFILPE 186 (270)
T ss_dssp CHHHHTTTTTTT-SEEEEESC--C-TTHHHHH-TT------TSEEEEEESSCC--------TTCEE----GGGHHHHGGG
T ss_pred cHHHHHHhhcCC-CEEEEECC--C-HHHHHHH-hC------CCCEEEEECCCC--------CCCCC----hHHHHHHhhc
Confidence 456555567788 99999999 4 5666654 44 678888877643 24432 2345668899
Q ss_pred CCeEEEe
Q 012479 179 SDLVLLL 185 (462)
Q Consensus 179 ADvViLa 185 (462)
||+|++.
T Consensus 187 aD~viiT 193 (270)
T 2h1q_A 187 CDYVYIT 193 (270)
T ss_dssp CSEEEEE
T ss_pred CCEEEEE
Confidence 9998865
No 446
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=90.58 E-value=0.35 Score=47.48 Aligned_cols=36 Identities=17% Similarity=0.195 Sum_probs=31.3
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEec
Q 012479 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR 148 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r 148 (462)
-.++| ++|.|||.|..|..-+..|.+. |.+|+|...
T Consensus 9 ~~l~~-k~VLVVGgG~va~rka~~Ll~~------Ga~VtViap 44 (274)
T 1kyq_A 9 HQLKD-KRILLIGGGEVGLTRLYKLMPT------GCKLTLVSP 44 (274)
T ss_dssp ECCTT-CEEEEEEESHHHHHHHHHHGGG------TCEEEEEEE
T ss_pred EEcCC-CEEEEECCcHHHHHHHHHHHhC------CCEEEEEcC
Confidence 45789 9999999999999999999998 888777654
No 447
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=90.53 E-value=1.7 Score=43.30 Aligned_cols=94 Identities=16% Similarity=0.092 Sum_probs=61.3
Q ss_pred cCCCCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCcee-cCCCcCCHhhhhc-----cCC
Q 012479 108 FNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE-ENGTLGDIYETIS-----GSD 180 (462)
Q Consensus 108 l~gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~-~d~~~~~~~eav~-----~AD 180 (462)
-+| .+|.|+|. |.+|...++-++.. |.+|++.. +++..+.+++.|... .+....+..+.++ ..|
T Consensus 163 ~~g-~~VlV~Ga~G~vG~~a~qla~~~------Ga~Vi~~~--~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 163 SKP-VYVLVYGGSTATATVTMQMLRLS------GYIPIATC--SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLR 233 (371)
T ss_dssp SSC-CEEEEESTTSHHHHHHHHHHHHT------TCEEEEEE--CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCC
T ss_pred CCC-cEEEEECCCcHHHHHHHHHHHHC------CCEEEEEe--CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCcc
Confidence 467 89999999 89999999999988 88776543 355678999999632 0111123333332 389
Q ss_pred eEEEeecchhHHHHHHHHHhcC-CCCcEEEEecc
Q 012479 181 LVLLLISDAAQADNYEKIFSCM-KPNSILGLSHG 213 (462)
Q Consensus 181 vViLavpd~a~~~vl~eI~~~L-k~gaiL~~a~G 213 (462)
+||-++.... .++.....+ +++-.++..+.
T Consensus 234 ~v~d~~g~~~---~~~~~~~~l~~~~G~iv~~g~ 264 (371)
T 3gqv_A 234 YALDCITNVE---STTFCFAAIGRAGGHYVSLNP 264 (371)
T ss_dssp EEEESSCSHH---HHHHHHHHSCTTCEEEEESSC
T ss_pred EEEECCCchH---HHHHHHHHhhcCCCEEEEEec
Confidence 9999988632 233334455 46555555543
No 448
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=90.52 E-value=0.45 Score=48.16 Aligned_cols=70 Identities=9% Similarity=-0.003 Sum_probs=48.8
Q ss_pred ccCCCCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecC----CchhHHH----HHHcCceecCCCcCCHhhhhc
Q 012479 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFAE----ARAAGFTEENGTLGDIYETIS 177 (462)
Q Consensus 107 ~l~gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~----~~~s~~~----A~~~G~~~~d~~~~~~~eav~ 177 (462)
.|+| .||++||= +++..|++..+..- |.++.+...+ ++...+. +++.|.... .+.+++ +++
T Consensus 172 ~l~g-lkva~vGD~~rva~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~--~~~d~~-av~ 241 (339)
T 4a8t_A 172 KLED-CKVVFVGDATQVCFSLGLITTKM------GMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFL--VTDDAS-SVE 241 (339)
T ss_dssp CGGG-CEEEEESSCCHHHHHHHHHHHHT------TCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEE--EECCGG-GGT
T ss_pred CCCC-CEEEEECCCchhHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEE--EECChh-HHc
Confidence 5889 99999995 68899999999887 8888776443 2222232 344564210 146788 999
Q ss_pred cCCeEEEee
Q 012479 178 GSDLVLLLI 186 (462)
Q Consensus 178 ~ADvViLav 186 (462)
+||+|+.-+
T Consensus 242 ~aDvvytd~ 250 (339)
T 4a8t_A 242 GADFLYTDV 250 (339)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEecC
Confidence 999999633
No 449
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=90.50 E-value=0.32 Score=46.47 Aligned_cols=66 Identities=20% Similarity=0.230 Sum_probs=44.7
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCcee--cCCCcCCHhhhhccCCeEEEeec
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE--ENGTLGDIYETISGSDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~--~d~~~~~~~eav~~ADvViLavp 187 (462)
|+|.|.| .|.+|.++++.|.+. |++|++..|. +...+ .. ++.. .|-...+..++++++|+||.+..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~-~~~~~-~~--~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~ 71 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKND------GNTPIILTRS-IGNKA-IN--DYEYRVSDYTLEDLINQLNDVDAVVHLAA 71 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESC-CC--------CCEEEECCCCHHHHHHHTTTCSEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhC------CCEEEEEeCC-CCccc-CC--ceEEEEccccHHHHHHhhcCCCEEEEccc
Confidence 7999999 699999999999999 9998877776 32222 21 3321 11111224567889999998864
No 450
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=90.50 E-value=0.56 Score=46.09 Aligned_cols=94 Identities=18% Similarity=0.185 Sum_probs=58.8
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHHhhhhhcCC-cEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhh------ccCC
Q 012479 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI------SGSD 180 (462)
Q Consensus 108 l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G-~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav------~~AD 180 (462)
-.| .+|.|+|.|.+|...++-++.. | .+|++ .+.+++..+.+++.|....-....+..+.+ ...|
T Consensus 170 ~~g-~~vlv~GaG~vG~~a~qla~~~------g~~~Vi~-~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d 241 (345)
T 3jv7_A 170 GPG-STAVVIGVGGLGHVGIQILRAV------SAARVIA-VDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGAT 241 (345)
T ss_dssp CTT-CEEEEECCSHHHHHHHHHHHHH------CCCEEEE-EESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEE
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEE-EcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCe
Confidence 346 8999999999999998888866 4 35554 444456678889988642100011222222 1689
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 181 vViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
+||-++.... .+++....++++-.++..+
T Consensus 242 ~v~d~~G~~~---~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 242 AVFDFVGAQS---TIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp EEEESSCCHH---HHHHHHHHEEEEEEEEECS
T ss_pred EEEECCCCHH---HHHHHHHHHhcCCEEEEEC
Confidence 9999988652 3444445566665555443
No 451
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=90.42 E-value=0.81 Score=46.52 Aligned_cols=94 Identities=18% Similarity=0.158 Sum_probs=54.4
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEec-C-CchhHHHHHH----cC------------ceecCC-C--c
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR-K-GSRSFAEARA----AG------------FTEENG-T--L 169 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r-~-~~~s~~~A~~----~G------------~~~~d~-~--~ 169 (462)
+.||||+|+|.+|.-+.+.|.+. ..++++...+ . +........+ .| +.. ++ . +
T Consensus 17 ~ikVgI~G~G~iGr~llR~l~~~-----p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v-~g~~i~v 90 (354)
T 3cps_A 17 QGTLGINGFGRIGRLVLRACMER-----NDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCI-NGKVVKV 90 (354)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTC-----SSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEE-TTEEEEE
T ss_pred ceEEEEECCCHHHHHHHHHHHcC-----CCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEE-CCeEEEE
Confidence 46999999999999999988765 1466655444 2 2211111111 11 000 00 0 1
Q ss_pred ---CCHhhhh---ccCCeEEEeecchhHHHHHHHHHhcCCCCc--EEEEecc
Q 012479 170 ---GDIYETI---SGSDLVLLLISDAAQADNYEKIFSCMKPNS--ILGLSHG 213 (462)
Q Consensus 170 ---~~~~eav---~~ADvViLavpd~a~~~vl~eI~~~Lk~ga--iL~~a~G 213 (462)
.++++.- .++|+||.|+|.....+..+ .+++.|. +|++.++
T Consensus 91 ~~~~dp~~i~w~~~~vDvV~eatg~~~s~e~a~---~~l~~GakkvVId~pa 139 (354)
T 3cps_A 91 FQAKDPAEIPWGASGAQIVCESTGVFTTEEKAS---LHLKGGAKKVIISAPP 139 (354)
T ss_dssp ECCSCGGGCCHHHHTCCEEEECSSSCCSHHHHG---GGGTTTCSEEEESSCC
T ss_pred EecCChHHCCcccCCCCEEEECCCchhhHHHHH---HHHHcCCcEEEEeCCC
Confidence 1333331 47999999999877765554 4566776 6665554
No 452
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=90.40 E-value=0.96 Score=46.98 Aligned_cols=96 Identities=18% Similarity=0.138 Sum_probs=65.5
Q ss_pred ccCCCCEEEEEccc----------chHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHc-------------Cce
Q 012479 107 AFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-------------GFT 163 (462)
Q Consensus 107 ~l~gikkIgIIG~G----------~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~-------------G~~ 163 (462)
.++| +||+|+|+- +-...++..|.+. |.+|.+.+..-.. .+..... ++.
T Consensus 326 ~~~~-~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~------g~~v~~~DP~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 397 (467)
T 2q3e_A 326 TVTD-KKIAILGFAFKKDTGDTRESSSIYISKYLMDE------GAHLHIYDPKVPR-EQIVVDLSHPGVSEDDQVSRLVT 397 (467)
T ss_dssp CCTT-CEEEEECCSSSTTCCCCTTCHHHHHHHHHHHT------TCEEEEECSSSCH-HHHHHHHCC------CHHHHHEE
T ss_pred ccCC-CEEEEEeeccCCCCcchhhChHHHHHHHHHHC------CCEEEEEcCccCH-HHHhhhhccccccccccccCcee
Confidence 4788 999999986 3677888888888 8888776553221 1110111 233
Q ss_pred ecCCCcCCHhhhhccCCeEEEeecchhHHHH-HHHHHhcCCCCcEEEEeccc
Q 012479 164 EENGTLGDIYETISGSDLVLLLISDAAQADN-YEKIFSCMKPNSILGLSHGF 214 (462)
Q Consensus 164 ~~d~~~~~~~eav~~ADvViLavpd~a~~~v-l~eI~~~Lk~gaiL~~a~G~ 214 (462)
. ..+..|++++||+|+++|.-.....+ ++++...|+...+|.|.-++
T Consensus 398 ~----~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~~~i~D~r~~ 445 (467)
T 2q3e_A 398 I----SKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRV 445 (467)
T ss_dssp E----CSSHHHHHTTCSEEEECSCCGGGGGSCHHHHHHHSCSSCEEEESSCT
T ss_pred e----cCCHHHHHhCCcEEEEecCChhhhcCCHHHHHHhcCCCCEEEeCCCc
Confidence 2 34788899999999999997766543 45677777765557777654
No 453
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=90.38 E-value=0.3 Score=44.73 Aligned_cols=73 Identities=15% Similarity=0.173 Sum_probs=48.0
Q ss_pred cCCCCEEEEEc-ccchHHHHHHHHHHhhhhhcCCc--EEEEEecCCchhHHHHHHcCc--eecCCC-cCCHhhhhccCCe
Q 012479 108 FNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAAGF--TEENGT-LGDIYETISGSDL 181 (462)
Q Consensus 108 l~gikkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~--~Vivg~r~~~~s~~~A~~~G~--~~~d~~-~~~~~eav~~ADv 181 (462)
+++ |+|.|.| .|.+|.++++.|.+. |. +|++..|...+..+.. ..++ ...|-+ ..+..+++++.|+
T Consensus 16 m~~-~~vlVtGasg~iG~~l~~~L~~~------G~~~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~ 87 (242)
T 2bka_A 16 MQN-KSVFILGASGETGRVLLKEILEQ------GLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKLDDYASAFQGHDV 87 (242)
T ss_dssp HTC-CEEEEECTTSHHHHHHHHHHHHH------TCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGGGGGGGGGSSCSE
T ss_pred hcC-CeEEEECCCcHHHHHHHHHHHcC------CCCCEEEEEEcCCCCccccc-cCCceEEecCcCCHHHHHHHhcCCCE
Confidence 567 8999999 699999999999999 98 8888777643221111 1122 110100 1234567788999
Q ss_pred EEEeecc
Q 012479 182 VLLLISD 188 (462)
Q Consensus 182 ViLavpd 188 (462)
||.+...
T Consensus 88 vi~~ag~ 94 (242)
T 2bka_A 88 GFCCLGT 94 (242)
T ss_dssp EEECCCC
T ss_pred EEECCCc
Confidence 9998754
No 454
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=90.35 E-value=0.35 Score=47.59 Aligned_cols=68 Identities=12% Similarity=0.073 Sum_probs=42.4
Q ss_pred CEEEEEcc-cchHHHHHHHHHHhhhhhcCCc-------EEEEEecCCc--hhHHHHHH--c---CceecCC-CcCCHhhh
Q 012479 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI-------VVKVGLRKGS--RSFAEARA--A---GFTEENG-TLGDIYET 175 (462)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~-------~Vivg~r~~~--~s~~~A~~--~---G~~~~d~-~~~~~~ea 175 (462)
+||.|+|. |.+|.+++..|... |+ +|++.++... +....+.. . .+.. |- ...+..++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~------g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~-di~~~~~~~~a 77 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAG------EMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLA-GLEATDDPKVA 77 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT------TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEE-EEEEESCHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC------CCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccC-CeEeccChHHH
Confidence 68999996 99999999999887 64 5655444321 11111111 1 1210 00 02456788
Q ss_pred hccCCeEEEee
Q 012479 176 ISGSDLVLLLI 186 (462)
Q Consensus 176 v~~ADvViLav 186 (462)
++++|+||.+.
T Consensus 78 ~~~~D~Vih~A 88 (327)
T 1y7t_A 78 FKDADYALLVG 88 (327)
T ss_dssp TTTCSEEEECC
T ss_pred hCCCCEEEECC
Confidence 99999999874
No 455
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=90.32 E-value=0.48 Score=45.79 Aligned_cols=68 Identities=29% Similarity=0.235 Sum_probs=44.0
Q ss_pred cccCCCCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCC---HhhhhccCCe
Q 012479 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDL 181 (462)
Q Consensus 106 ~~l~gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~---~~eav~~ADv 181 (462)
+.+++ |+|.|.|. |.+|.++++.|.+. |++|++..|.... .++......+.+ ..++++++|+
T Consensus 15 ~~~~~-~~vlVtGatG~iG~~l~~~L~~~------G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (347)
T 4id9_A 15 VPRGS-HMILVTGSAGRVGRAVVAALRTQ------GRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIMGVSA 80 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHT------TCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHTTCSE
T ss_pred cccCC-CEEEEECCCChHHHHHHHHHHhC------CCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHhCCCE
Confidence 56777 99999997 99999999999999 9988877766433 222110011223 4467889999
Q ss_pred EEEeec
Q 012479 182 VLLLIS 187 (462)
Q Consensus 182 ViLavp 187 (462)
||.+..
T Consensus 81 vih~A~ 86 (347)
T 4id9_A 81 VLHLGA 86 (347)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 998754
No 456
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=90.15 E-value=1.3 Score=46.61 Aligned_cols=92 Identities=11% Similarity=0.113 Sum_probs=56.5
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHc-CceecCCCcCCHh---h-hhccCCeEEEee
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIY---E-TISGSDLVLLLI 186 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~-G~~~~d~~~~~~~---e-av~~ADvViLav 186 (462)
++|.|+|+|..|..+++.|.+. |+++++.+ .+++..+.+.+. |+..--+...+.+ + -+++||.|++ +
T Consensus 128 ~hviI~G~g~~g~~la~~L~~~------~~~vvvid-~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~-t 199 (565)
T 4gx0_A 128 GHILIFGIDPITRTLIRKLESR------NHLFVVVT-DNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIA-N 199 (565)
T ss_dssp SCEEEESCCHHHHHHHHHTTTT------TCCEEEEE-SCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEE-C
T ss_pred CeEEEECCChHHHHHHHHHHHC------CCCEEEEE-CCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEE-e
Confidence 6899999999999999999988 88876654 445556667766 7643211122222 2 2678999998 5
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEe
Q 012479 187 SDAAQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
+++...-..-..+..+..-.++.-+
T Consensus 200 ~~D~~n~~~~~~ar~~~~~~iiar~ 224 (565)
T 4gx0_A 200 LSDPDNANLCLTVRSLCQTPIIAVV 224 (565)
T ss_dssp SCHHHHHHHHHHHHTTCCCCEEEEC
T ss_pred CCcHHHHHHHHHHHHhcCceEEEEE
Confidence 5444322222233344433355443
No 457
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=90.15 E-value=0.31 Score=47.21 Aligned_cols=77 Identities=14% Similarity=0.067 Sum_probs=50.3
Q ss_pred cccccCCCCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHH-cCceecCCCcCC---Hhhhhc-
Q 012479 104 LPDAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-AGFTEENGTLGD---IYETIS- 177 (462)
Q Consensus 104 ~~~~l~gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~-~G~~~~d~~~~~---~~eav~- 177 (462)
.++.++| |+|.|.|. |-+|.++++.|.+. |++|++..|......+.... .++......+.+ ..++++
T Consensus 14 ~~~~~~~-~~vlVTGasG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~ 86 (330)
T 2pzm_A 14 LVPRGSH-MRILITGGAGCLGSNLIEHWLPQ------GHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDS 86 (330)
T ss_dssp CCSTTTC-CEEEEETTTSHHHHHHHHHHGGG------TCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHH
T ss_pred CcccCCC-CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhh
Confidence 3688899 99999996 99999999999998 99888777743321110010 122110011233 345677
Q ss_pred -cCCeEEEeec
Q 012479 178 -GSDLVLLLIS 187 (462)
Q Consensus 178 -~ADvViLavp 187 (462)
+.|+||.+..
T Consensus 87 ~~~D~vih~A~ 97 (330)
T 2pzm_A 87 FKPTHVVHSAA 97 (330)
T ss_dssp HCCSEEEECCC
T ss_pred cCCCEEEECCc
Confidence 8999998864
No 458
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=90.15 E-value=0.97 Score=42.71 Aligned_cols=53 Identities=9% Similarity=0.039 Sum_probs=33.7
Q ss_pred ccccceeecCcccccccccccCCCCEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCC
Q 012479 88 DRDEYIVRGGRDLFNLLPDAFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG 150 (462)
Q Consensus 88 ~~~e~~~~~~~~~f~~~~~~l~gikkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~ 150 (462)
|+++..++ |..+.....++| |+|.|.| .|-+|.++++.|.+. |.+|++..|..
T Consensus 12 ~~~~~~~~---~~~~~~~~~l~~-k~vlITGasggIG~~la~~L~~~------G~~V~~~~r~~ 65 (272)
T 1yb1_A 12 GRENLYFQ---GHMPKRRKSVTG-EIVLITGAGHGIGRLTAYEFAKL------KSKLVLWDINK 65 (272)
T ss_dssp ----------------CCCCCTT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred cchhheec---cccCCcccccCC-CEEEEECCCchHHHHHHHHHHHC------CCEEEEEEcCH
Confidence 44444333 555555567889 9999998 568999999999998 99988777653
No 459
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=90.00 E-value=0.24 Score=49.82 Aligned_cols=89 Identities=17% Similarity=0.121 Sum_probs=52.5
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcC-CcEEEEEecCCc--hhHHHHHHcCceecCCCcCCH-hhhhccCCeEEEee
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKS-DIVVKVGLRKGS--RSFAEARAAGFTEENGTLGDI-YETISGSDLVLLLI 186 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~-G~~Vivg~r~~~--~s~~~A~~~G~~~~d~~~~~~-~eav~~ADvViLav 186 (462)
+||+|+| .|.+|..+.+.|.++ +. .++++...+... +... -.|... .+.+. .+..+++|+||+|+
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~----~~~~~elv~i~s~~~~g~~~~---~~g~~i---~~~~~~~~~~~~~DvV~~a~ 76 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDER----DFPLHRLHLLASAESAGQRMG---FAESSL---RVGDVDSFDFSSVGLAFFAA 76 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT----TCCCSCEEEEECTTTTTCEEE---ETTEEE---ECEEGGGCCGGGCSEEEECS
T ss_pred cEEEEECCCCHHHHHHHHHHHhC----CCCcEEEEEEecCCCCCCccc---cCCcce---EEecCCHHHhcCCCEEEEcC
Confidence 6899999 899999999998855 00 224443332211 1100 012111 01111 23367899999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEecc
Q 012479 187 SDAAQADNYEKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~gaiL~~a~G 213 (462)
|.....++.+.+. +.|..+++.++
T Consensus 77 g~~~s~~~a~~~~---~aG~kvId~Sa 100 (340)
T 2hjs_A 77 AAEVSRAHAERAR---AAGCSVIDLSG 100 (340)
T ss_dssp CHHHHHHHHHHHH---HTTCEEEETTC
T ss_pred CcHHHHHHHHHHH---HCCCEEEEeCC
Confidence 9887777766543 45776766655
No 460
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=89.94 E-value=0.53 Score=47.98 Aligned_cols=69 Identities=9% Similarity=-0.018 Sum_probs=48.4
Q ss_pred ccCCCCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecC----CchhHHH----HHHcCceecCCCcCCHhhhhc
Q 012479 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFAE----ARAAGFTEENGTLGDIYETIS 177 (462)
Q Consensus 107 ~l~gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~----~~~s~~~----A~~~G~~~~d~~~~~~~eav~ 177 (462)
.|+| .||++||= +++..|++..+..- |.++.+.... ++...+. +++.|.... .+.+++ +++
T Consensus 150 ~l~g-lkva~vGD~~rva~Sl~~~~~~~------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~--~~~d~~-av~ 219 (355)
T 4a8p_A 150 KLED-CKVVFVGDATQVCFSLGLITTKM------GMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFL--VTDDAS-SVE 219 (355)
T ss_dssp CGGG-CEEEEESCCCHHHHHHHHHHHHT------TCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEE--EECCGG-GGT
T ss_pred CCCC-CEEEEECCCchhHHHHHHHHHHc------CCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEE--EECCHH-HHc
Confidence 5888 99999994 68999999999887 8888776443 2222232 344564210 146788 999
Q ss_pred cCCeEEEe
Q 012479 178 GSDLVLLL 185 (462)
Q Consensus 178 ~ADvViLa 185 (462)
+||+|+.-
T Consensus 220 ~aDVVytd 227 (355)
T 4a8p_A 220 GADFLYTD 227 (355)
T ss_dssp TCSEEEEC
T ss_pred CCCEEEec
Confidence 99999963
No 461
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=89.91 E-value=0.37 Score=46.75 Aligned_cols=88 Identities=15% Similarity=0.143 Sum_probs=57.1
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeecc
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavpd 188 (462)
.| .+|.|+|.|.+|...++-++.. |.+|++.. +++..+.+++.|.... ..+.+++-...|+||-++..
T Consensus 142 ~g-~~VlV~GaG~vG~~a~qlak~~------Ga~Vi~~~--~~~~~~~~~~lGa~~v---~~d~~~v~~g~Dvv~d~~g~ 209 (315)
T 3goh_A 142 KQ-REVLIVGFGAVNNLLTQMLNNA------GYVVDLVS--ASLSQALAAKRGVRHL---YREPSQVTQKYFAIFDAVNS 209 (315)
T ss_dssp SC-CEEEEECCSHHHHHHHHHHHHH------TCEEEEEC--SSCCHHHHHHHTEEEE---ESSGGGCCSCEEEEECC---
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEE--ChhhHHHHHHcCCCEE---EcCHHHhCCCccEEEECCCc
Confidence 57 8999999999999999999988 88776555 4556788899997531 22222222467999988875
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEec
Q 012479 189 AAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 189 ~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
... .+....++++-.++..+
T Consensus 210 ~~~----~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 210 QNA----AALVPSLKANGHIICIQ 229 (315)
T ss_dssp --------TTGGGEEEEEEEEEEC
T ss_pred hhH----HHHHHHhcCCCEEEEEe
Confidence 432 34455666766555443
No 462
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=89.85 E-value=0.98 Score=44.97 Aligned_cols=91 Identities=14% Similarity=0.180 Sum_probs=59.4
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHH-hhhhhcCCcEEEEEecCCchhHHHHHHcCceec-CCCcCCHhhhhc-----cCC
Q 012479 109 NGINQIGVIG-WGSQGPAQAQNLRD-SLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS-----GSD 180 (462)
Q Consensus 109 ~gikkIgIIG-~G~mG~AiA~~Lrd-s~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~eav~-----~AD 180 (462)
+| .+|.|+| .|.+|...++-++. . |.+|++.. .+++..+.+++.|.... +. ..+..+.+. ..|
T Consensus 171 ~g-~~VlV~Ga~G~vG~~a~qlak~~~------g~~Vi~~~-~~~~~~~~~~~lGad~vi~~-~~~~~~~v~~~~~~g~D 241 (363)
T 4dvj_A 171 AA-PAILIVGGAGGVGSIAVQIARQRT------DLTVIATA-SRPETQEWVKSLGAHHVIDH-SKPLAAEVAALGLGAPA 241 (363)
T ss_dssp SE-EEEEEESTTSHHHHHHHHHHHHHC------CSEEEEEC-SSHHHHHHHHHTTCSEEECT-TSCHHHHHHTTCSCCEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHhc------CCEEEEEe-CCHHHHHHHHHcCCCEEEeC-CCCHHHHHHHhcCCCce
Confidence 57 8999999 99999999998886 5 66766544 44556788888886321 11 123333332 579
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 012479 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 181 vViLavpd~a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
+||-++... ..+++....++++-.++..
T Consensus 242 vvid~~g~~---~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 242 FVFSTTHTD---KHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEECSCHH---HHHHHHHHHSCTTCEEEEC
T ss_pred EEEECCCch---hhHHHHHHHhcCCCEEEEE
Confidence 999888743 2344555567776665544
No 463
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=89.85 E-value=1.6 Score=45.58 Aligned_cols=63 Identities=19% Similarity=0.226 Sum_probs=45.9
Q ss_pred CCCEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeec
Q 012479 110 GINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (462)
Q Consensus 110 gikkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavp 187 (462)
+ |||.|.| .|.+|.+++..|.+. |++|++..|...+. ..+.. |- .....++++++|+||.+..
T Consensus 147 ~-m~VLVTGatG~IG~~l~~~L~~~------G~~V~~l~R~~~~~------~~v~~-d~-~~~~~~~l~~~D~Vih~A~ 210 (516)
T 3oh8_A 147 P-LTVAITGSRGLVGRALTAQLQTG------GHEVIQLVRKEPKP------GKRFW-DP-LNPASDLLDGADVLVHLAG 210 (516)
T ss_dssp C-CEEEEESTTSHHHHHHHHHHHHT------TCEEEEEESSSCCT------TCEEC-CT-TSCCTTTTTTCSEEEECCC
T ss_pred C-CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEECCCCCc------cceee-cc-cchhHHhcCCCCEEEECCC
Confidence 5 8999999 699999999999999 99988777764431 11221 11 1234567889999998764
No 464
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=89.82 E-value=1.3 Score=43.75 Aligned_cols=92 Identities=9% Similarity=0.007 Sum_probs=56.8
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcE-EEEEecCCchhHHHHHHcCceecCCCc-----CCHhhhh------
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIV-VKVGLRKGSRSFAEARAAGFTEENGTL-----GDIYETI------ 176 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~-Vivg~r~~~~s~~~A~~~G~~~~d~~~-----~~~~eav------ 176 (462)
+| .+|.|+|.|.+|...++-++.. |.+ |++. +.+++..+.+++.+-...+-.. .+..+.+
T Consensus 179 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~-~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g 250 (363)
T 3m6i_A 179 LG-DPVLICGAGPIGLITMLCAKAA------GACPLVIT-DIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGG 250 (363)
T ss_dssp TT-CCEEEECCSHHHHHHHHHHHHT------TCCSEEEE-ESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSS
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEE-CCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCC
Confidence 57 8999999999999999999988 886 5544 4445556777765311000000 1112222
Q ss_pred ccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 012479 177 SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 177 ~~ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
...|+||-++.... .++.....++++-.++..
T Consensus 251 ~g~Dvvid~~g~~~---~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 251 IEPAVALECTGVES---SIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp CCCSEEEECSCCHH---HHHHHHHHSCTTCEEEEC
T ss_pred CCCCEEEECCCChH---HHHHHHHHhcCCCEEEEE
Confidence 25799999887542 344445567776665544
No 465
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=89.81 E-value=0.44 Score=44.69 Aligned_cols=39 Identities=15% Similarity=0.107 Sum_probs=32.9
Q ss_pred cccCCCCEEEEEcc-cc-hHHHHHHHHHHhhhhhcCCcEEEEEecCCc
Q 012479 106 DAFNGINQIGVIGW-GS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGS 151 (462)
Q Consensus 106 ~~l~gikkIgIIG~-G~-mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~ 151 (462)
..++| |++.|.|. |. +|.++++.|.+. |.+|++..|...
T Consensus 18 ~~l~~-k~vlITGasg~GIG~~~a~~l~~~------G~~V~~~~r~~~ 58 (266)
T 3o38_A 18 GLLKG-KVVLVTAAAGTGIGSTTARRALLE------GADVVISDYHER 58 (266)
T ss_dssp STTTT-CEEEESSCSSSSHHHHHHHHHHHT------TCEEEEEESCHH
T ss_pred cCCCC-CEEEEECCCCCchHHHHHHHHHHC------CCEEEEecCCHH
Confidence 45788 99999998 85 999999999999 999887776543
No 466
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=89.75 E-value=0.69 Score=48.77 Aligned_cols=91 Identities=12% Similarity=0.217 Sum_probs=64.5
Q ss_pred ccCCCCEEEEEccc----------chHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhh
Q 012479 107 AFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI 176 (462)
Q Consensus 107 ~l~gikkIgIIG~G----------~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav 176 (462)
.++| +||+|.|+- +-...++..|.+. |.+|.+.+..-.. . .++.. ..+.++++
T Consensus 350 ~~~~-~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~------g~~V~~~DP~~~~-~-----~~~~~----~~~~~~~~ 412 (478)
T 3g79_A 350 KMDG-SKVAMLGWAFIKDSDDARNTPSEPYRDLCLKA------GASVMVHDPYVVN-Y-----PGVEI----SDNLEEVV 412 (478)
T ss_dssp CSTT-CEEEEECSSSSTTCSCCTTCTHHHHHHHHHHH------TCEEEEECSSCCC-B-----TTBCE----ESCHHHHH
T ss_pred CCCC-CEEEEEeeecCCCCcchhcCcHHHHHHHHHHC------CCEEEEECCCccc-c-----cCcce----ecCHHHHH
Confidence 4688 999999973 3467888888888 9888776543221 1 11221 35788999
Q ss_pred ccCCeEEEeecchhHHH-HHHHHHhcCC-CCcEEEEeccc
Q 012479 177 SGSDLVLLLISDAAQAD-NYEKIFSCMK-PNSILGLSHGF 214 (462)
Q Consensus 177 ~~ADvViLavpd~a~~~-vl~eI~~~Lk-~gaiL~~a~G~ 214 (462)
++||+|+++|.-....+ -++.+...|+ +..+|.|.-++
T Consensus 413 ~~ad~vvi~t~~~~f~~~d~~~~~~~~~~~~~~i~D~rn~ 452 (478)
T 3g79_A 413 RNADAIVVLAGHSAYSSLKADWAKKVSAKANPVIIDGRNV 452 (478)
T ss_dssp TTCSEEEECSCCHHHHSCCHHHHHHHHCCSSCEEEESSSC
T ss_pred hcCCEEEEecCCHHHHhhhHHHHHHHhccCCCEEEECCCC
Confidence 99999999998766653 2456777777 36788887765
No 467
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=89.74 E-value=0.45 Score=46.33 Aligned_cols=91 Identities=14% Similarity=0.115 Sum_probs=56.4
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCcee-cCCCcCCHhhhh------ccCC
Q 012479 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE-ENGTLGDIYETI------SGSD 180 (462)
Q Consensus 109 ~gikkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~-~d~~~~~~~eav------~~AD 180 (462)
.| ++|.|+| .|.+|.+.++.++.. |.+|++..++ .+..+.+++.|... .|....+..+.+ ...|
T Consensus 140 ~g-~~vlV~Ga~ggiG~~~~~~a~~~------G~~V~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D 211 (327)
T 1qor_A 140 PD-EQFLFHAAAGGVGLIACQWAKAL------GAKLIGTVGT-AQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVR 211 (327)
T ss_dssp TT-CEEEESSTTBHHHHHHHHHHHHH------TCEEEEEESS-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCce
Confidence 46 8999999 799999999999988 8887766554 44466666666521 011111222222 1468
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 012479 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 181 vViLavpd~a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
+||.++... .++...+.++++-.++..
T Consensus 212 ~vi~~~g~~----~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 212 VVYDSVGRD----TWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp EEEECSCGG----GHHHHHHTEEEEEEEEEC
T ss_pred EEEECCchH----HHHHHHHHhcCCCEEEEE
Confidence 888888733 344445556665554444
No 468
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=89.69 E-value=0.34 Score=47.92 Aligned_cols=32 Identities=19% Similarity=0.154 Sum_probs=28.7
Q ss_pred CCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEec
Q 012479 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR 148 (462)
Q Consensus 111 ikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r 148 (462)
||||+|||-|..|..++..+++. |+++++.+.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~------G~~vv~vd~ 32 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKA------GMKVVLVDK 32 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEeC
Confidence 69999999999999999999999 998876654
No 469
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=89.45 E-value=1.6 Score=37.55 Aligned_cols=91 Identities=13% Similarity=0.088 Sum_probs=55.0
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHc----Cce---ecCCCcCCHhhhh----c
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA----GFT---EENGTLGDIYETI----S 177 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~----G~~---~~d~~~~~~~eav----~ 177 (462)
++ ++|.-||+|. | .++..+.+.. .+.+ +++.+.++...+.|++. |+. .. ..+..+.+ .
T Consensus 25 ~~-~~vldiG~G~-G-~~~~~l~~~~----~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~---~~d~~~~~~~~~~ 93 (178)
T 3hm2_A 25 PH-ETLWDIGGGS-G-SIAIEWLRST----PQTT-AVCFEISEERRERILSNAINLGVSDRIAV---QQGAPRAFDDVPD 93 (178)
T ss_dssp TT-EEEEEESTTT-T-HHHHHHHTTS----SSEE-EEEECSCHHHHHHHHHHHHTTTCTTSEEE---ECCTTGGGGGCCS
T ss_pred CC-CeEEEeCCCC-C-HHHHHHHHHC----CCCe-EEEEeCCHHHHHHHHHHHHHhCCCCCEEE---ecchHhhhhccCC
Confidence 45 7999999998 3 3444444431 0334 46777777666666642 321 10 12222222 5
Q ss_pred cCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 012479 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 178 ~ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
..|+|++.-+... ..+++++...|+||..+.+.
T Consensus 94 ~~D~i~~~~~~~~-~~~l~~~~~~L~~gG~l~~~ 126 (178)
T 3hm2_A 94 NPDVIFIGGGLTA-PGVFAAAWKRLPVGGRLVAN 126 (178)
T ss_dssp CCSEEEECC-TTC-TTHHHHHHHTCCTTCEEEEE
T ss_pred CCCEEEECCcccH-HHHHHHHHHhcCCCCEEEEE
Confidence 6899997766544 67888999999998876543
No 470
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=89.39 E-value=0.88 Score=42.98 Aligned_cols=90 Identities=17% Similarity=0.137 Sum_probs=60.0
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHH----cCc--eecCCCcCCHhhhh--ccCC
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA----AGF--TEENGTLGDIYETI--SGSD 180 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~----~G~--~~~d~~~~~~~eav--~~AD 180 (462)
++ ++|.-||+|.-. ++..+.+. |.+ +++.+.++...+.|++ .|. .. ...+..+.+ ...|
T Consensus 120 ~~-~~VLDiGcG~G~--l~~~la~~------g~~-v~gvDi~~~~v~~a~~n~~~~~~~v~~---~~~d~~~~~~~~~fD 186 (254)
T 2nxc_A 120 PG-DKVLDLGTGSGV--LAIAAEKL------GGK-ALGVDIDPMVLPQAEANAKRNGVRPRF---LEGSLEAALPFGPFD 186 (254)
T ss_dssp TT-CEEEEETCTTSH--HHHHHHHT------TCE-EEEEESCGGGHHHHHHHHHHTTCCCEE---EESCHHHHGGGCCEE
T ss_pred CC-CEEEEecCCCcH--HHHHHHHh------CCe-EEEEECCHHHHHHHHHHHHHcCCcEEE---EECChhhcCcCCCCC
Confidence 46 899999999933 44456666 664 4677776666666655 342 21 023454433 3579
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 012479 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 181 vViLavpd~a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
+|+...+......+++++...|+||-.+.++
T Consensus 187 ~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils 217 (254)
T 2nxc_A 187 LLVANLYAELHAALAPRYREALVPGGRALLT 217 (254)
T ss_dssp EEEEECCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCcHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 9998777666778888999999998876654
No 471
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=89.39 E-value=1.6 Score=43.22 Aligned_cols=71 Identities=20% Similarity=0.259 Sum_probs=46.5
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhH-HHHHH-cCceecCCC-cCC---HhhhhccCCeEEE
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF-AEARA-AGFTEENGT-LGD---IYETISGSDLVLL 184 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~-~~A~~-~G~~~~d~~-~~~---~~eav~~ADvViL 184 (462)
|+|.|.| .|.+|.++++.|.+. |++|++..|+.++.. +.... .++...... ..+ ..++++++|+||.
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~ 79 (352)
T 1xgk_A 6 KTIAVVGATGRQGASLIRVAAAV------GHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFI 79 (352)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHT------TCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhC------CCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEE
Confidence 7899999 599999999999988 888887777644321 11111 133211111 122 4567889999997
Q ss_pred eecc
Q 012479 185 LISD 188 (462)
Q Consensus 185 avpd 188 (462)
+...
T Consensus 80 ~a~~ 83 (352)
T 1xgk_A 80 NTTS 83 (352)
T ss_dssp CCCS
T ss_pred cCCC
Confidence 7643
No 472
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=89.38 E-value=0.23 Score=50.72 Aligned_cols=86 Identities=16% Similarity=0.203 Sum_probs=53.2
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcCCc---EEEEEecC--CchhHHHHHHcC--ceecCCCcCCHhhhhccCCeEE
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI---VVKVGLRK--GSRSFAEARAAG--FTEENGTLGDIYETISGSDLVL 183 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~---~Vivg~r~--~~~s~~~A~~~G--~~~~d~~~~~~~eav~~ADvVi 183 (462)
.||+||| .|..|.-+.+-|.+. ++ ++...... ..+... -.| .... ..+ .+.++++|+||
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~------~~p~~el~~~as~~saG~~~~---~~~~~~~~~---~~~-~~~~~~~Dvvf 69 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEES------TLPIDKIRYLASARSAGKSLK---FKDQDITIE---ETT-ETAFEGVDIAL 69 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTC------CCCEEEEEEEECTTTTTCEEE---ETTEEEEEE---ECC-TTTTTTCSEEE
T ss_pred cEEEEECCCChHHHHHHHHHhcC------CCCcEEEEEEEccccCCCcce---ecCCCceEe---eCC-HHHhcCCCEEE
Confidence 6899999 899999999887765 44 22222211 111111 011 1110 012 23467899999
Q ss_pred EeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 012479 184 LLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 184 Lavpd~a~~~vl~eI~~~Lk~gaiL~~a~G 213 (462)
+|+|.....+..+.+. +.|..++|.++
T Consensus 70 ~a~~~~~s~~~a~~~~---~~G~~vIDlSa 96 (366)
T 3pwk_A 70 FSAGSSTSAKYAPYAV---KAGVVVVDNTS 96 (366)
T ss_dssp ECSCHHHHHHHHHHHH---HTTCEEEECSS
T ss_pred ECCChHhHHHHHHHHH---HCCCEEEEcCC
Confidence 9999888887777654 45777777766
No 473
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=89.34 E-value=1.6 Score=45.67 Aligned_cols=97 Identities=15% Similarity=0.190 Sum_probs=65.8
Q ss_pred ccCCCCEEEEEcc----------cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchh--HHHHHH-cC-------ceecC
Q 012479 107 AFNGINQIGVIGW----------GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS--FAEARA-AG-------FTEEN 166 (462)
Q Consensus 107 ~l~gikkIgIIG~----------G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s--~~~A~~-~G-------~~~~d 166 (462)
.++| ++|+|.|+ .+-...++..|.+. |.+|.+.+..-... .....+ .+ +..
T Consensus 332 ~~~~-~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~------g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~-- 402 (481)
T 2o3j_A 332 TVTD-KKIAIFGFAFKKNTGDTRESSAIHVIKHLMEE------HAKLSVYDPKVQKSQMLNDLASVTSAQDVERLITV-- 402 (481)
T ss_dssp CCTT-CEEEEECCSSSTTCCCCTTCHHHHHHHHHHHT------TCEEEEECSSSCHHHHHHHHHHHSCHHHHHHHEEE--
T ss_pred ccCC-CeEEEEeeeeCCCCCccccChHHHHHHHHHHC------CCEEEEECCCCCchhhHHHHHhhhccccccCceee--
Confidence 4688 99999997 35667778888877 88887765432211 112221 11 222
Q ss_pred CCcCCHhhhhccCCeEEEeecchhHHHH-HHHHHhcCCCCcEEEEeccc
Q 012479 167 GTLGDIYETISGSDLVLLLISDAAQADN-YEKIFSCMKPNSILGLSHGF 214 (462)
Q Consensus 167 ~~~~~~~eav~~ADvViLavpd~a~~~v-l~eI~~~Lk~gaiL~~a~G~ 214 (462)
+.+..|++++||+|+++|.-.....+ ++++...|+...+|.|.-++
T Consensus 403 --~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~~~i~D~r~~ 449 (481)
T 2o3j_A 403 --ESDPYAAARGAHAIVVLTEWDEFVELNYSQIHNDMQHPAAIFDGRLI 449 (481)
T ss_dssp --ESSHHHHHTTCSEEEECSCCGGGTTSCHHHHHHHSCSSCEEEESSSC
T ss_pred --cCCHHHHHcCCCEEEEcCCcHHhhccCHHHHHHhcCCCCEEEECCCC
Confidence 35778899999999999997766543 55677778776678887765
No 474
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=89.24 E-value=1.6 Score=43.88 Aligned_cols=88 Identities=14% Similarity=0.097 Sum_probs=54.5
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCC-------------------chhHH---HHHHc-
Q 012479 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG-------------------SRSFA---EARAA- 160 (462)
Q Consensus 105 ~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~-------------------~~s~~---~A~~~- 160 (462)
...|++ .+|.|||+|-.|..++++|..+ |+ ++.+.+... .+... ...+.
T Consensus 31 q~~L~~-~~VlivG~GGlG~~ia~~La~~------Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~ln 103 (346)
T 1y8q_A 31 QKRLRA-SRVLLVGLKGLGAEIAKNLILA------GVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLN 103 (346)
T ss_dssp HHHHHT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTC
T ss_pred HHHHhC-CeEEEECCCHHHHHHHHHHHHc------CCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHC
Confidence 467788 9999999999999999999998 77 555553210 11111 11111
Q ss_pred -Cceec--CCCc-CCHhhhhccCCeEEEeecchhHHHHHHHHH
Q 012479 161 -GFTEE--NGTL-GDIYETISGSDLVLLLISDAAQADNYEKIF 199 (462)
Q Consensus 161 -G~~~~--d~~~-~~~~eav~~ADvViLavpd~a~~~vl~eI~ 199 (462)
++... .... ....+.+++.|+||.++-+......+.+..
T Consensus 104 p~v~v~~~~~~~~~~~~~~~~~~dvVv~~~d~~~~r~~ln~~~ 146 (346)
T 1y8q_A 104 PMVDVKVDTEDIEKKPESFFTQFDAVCLTCCSRDVIVKVDQIC 146 (346)
T ss_dssp TTSEEEEECSCGGGCCHHHHTTCSEEEEESCCHHHHHHHHHHH
T ss_pred CCeEEEEEecccCcchHHHhcCCCEEEEcCCCHHHHHHHHHHH
Confidence 22110 0001 123567889999999987666655565543
No 475
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=89.11 E-value=1.7 Score=42.83 Aligned_cols=94 Identities=10% Similarity=0.046 Sum_probs=60.0
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCch---hHHHHHHcCceec-CCC---cCCHhhhhc---
Q 012479 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR---SFAEARAAGFTEE-NGT---LGDIYETIS--- 177 (462)
Q Consensus 109 ~gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~---s~~~A~~~G~~~~-d~~---~~~~~eav~--- 177 (462)
.| .+|.|+|. |.+|...++-++.. |.++++..+..++ ..+.+++.|.... +.. ..+..+...
T Consensus 167 ~g-~~VlV~Ga~G~vG~~aiqlak~~------Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~ 239 (357)
T 1zsy_A 167 PG-DSVIQNASNSGVGQAVIQIAAAL------GLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMP 239 (357)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHH------TCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSC
T ss_pred CC-CEEEEeCCcCHHHHHHHHHHHHc------CCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCC
Confidence 56 89999998 99999999998888 8877766654332 3567788886420 000 011122222
Q ss_pred cCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 012479 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 178 ~ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~G 213 (462)
..|+||-++..... .+....++++-.++..++
T Consensus 240 ~~Dvvid~~g~~~~----~~~~~~l~~~G~iv~~G~ 271 (357)
T 1zsy_A 240 QPRLALNCVGGKSS----TELLRQLARGGTMVTYGG 271 (357)
T ss_dssp CCSEEEESSCHHHH----HHHHTTSCTTCEEEECCC
T ss_pred CceEEEECCCcHHH----HHHHHhhCCCCEEEEEec
Confidence 37999998875433 234567787766665543
No 476
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=88.99 E-value=0.51 Score=48.82 Aligned_cols=92 Identities=17% Similarity=0.187 Sum_probs=60.5
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEecCC-------c----hhHHHHHHcCceecCCCcCCHhh
Q 012479 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG-------S----RSFAEARAAGFTEENGTLGDIYE 174 (462)
Q Consensus 107 ~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r~~-------~----~s~~~A~~~G~~~~d~~~~~~~e 174 (462)
.++. .||.|+|.|.-|.++|+-|... |. +|++.++++ . -....|..... .....+++|
T Consensus 185 ~l~d-~kVVi~GAGaAG~~iA~ll~~~------Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~---~~~~~~L~e 254 (398)
T 2a9f_A 185 SLDE-VSIVVNGGGSAGLSITRKLLAA------GATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNR---EFKSGTLED 254 (398)
T ss_dssp CTTS-CEEEEECCSHHHHHHHHHHHHH------TCCEEEEEETTEECCTTCCCSCCC---CHHHHHSC---TTCCCSCSH
T ss_pred CCCc-cEEEEECCCHHHHHHHHHHHHc------CCCeEEEEECCCcccCCccccchHHHHHHhhccCc---ccchhhHHH
Confidence 4445 6999999999999999999988 88 888877652 1 01122332111 111357899
Q ss_pred hhccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 012479 175 TISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 175 av~~ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
+++++|++|=+..|... =+++...|+++.+|...
T Consensus 255 av~~ADV~IG~Sapgl~---T~EmVk~Ma~~pIIfal 288 (398)
T 2a9f_A 255 ALEGADIFIGVSAPGVL---KAEWISKMAARPVIFAM 288 (398)
T ss_dssp HHHTTCSEEECCSTTCC---CHHHHHTSCSSCEEEEC
T ss_pred HhccCCEEEecCCCCCC---CHHHHHhhCCCCEEEEC
Confidence 99999998876544322 12555667888877644
No 477
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=88.97 E-value=0.91 Score=38.44 Aligned_cols=92 Identities=18% Similarity=0.122 Sum_probs=55.0
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhc--cCCeEEEeecch
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISDA 189 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~--~ADvViLavpd~ 189 (462)
+++.|||.|..|..++..|++. .|++++...+.+...... .-.|+.+. + ..+..+.++ +.|.|++++|..
T Consensus 5 ~~vlIiGaG~~g~~l~~~l~~~-----~g~~vvg~~d~~~~~~g~-~i~g~pV~-g-~~~l~~~~~~~~id~viia~~~~ 76 (141)
T 3nkl_A 5 KKVLIYGAGSAGLQLANMLRQG-----KEFHPIAFIDDDRKKHKT-TMQGITIY-R-PKYLERLIKKHCISTVLLAVPSA 76 (141)
T ss_dssp EEEEEECCSHHHHHHHHHHHHS-----SSEEEEEEECSCGGGTTC-EETTEEEE-C-GGGHHHHHHHHTCCEEEECCTTS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCcEEEEEEECCcccCCC-EecCeEEE-C-HHHHHHHHHHCCCCEEEEeCCCC
Confidence 7899999999999999999875 167776555554321110 11354431 1 234445443 578999999965
Q ss_pred hH---HHHHHHHHhcCCCCcEEEEeccc
Q 012479 190 AQ---ADNYEKIFSCMKPNSILGLSHGF 214 (462)
Q Consensus 190 a~---~~vl~eI~~~Lk~gaiL~~a~G~ 214 (462)
.. .+++..+. +.|.-+.+...+
T Consensus 77 ~~~~~~~i~~~l~---~~gv~v~~vP~~ 101 (141)
T 3nkl_A 77 SQVQKKVIIESLA---KLHVEVLTIPNL 101 (141)
T ss_dssp CHHHHHHHHHHHH---TTTCEEEECCCH
T ss_pred CHHHHHHHHHHHH---HcCCeEEECCCH
Confidence 43 23433332 345556666554
No 478
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=88.94 E-value=0.57 Score=45.74 Aligned_cols=91 Identities=20% Similarity=0.262 Sum_probs=56.3
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceec-CCCcCCHhhhh------ccCC
Q 012479 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (462)
Q Consensus 109 ~gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~eav------~~AD 180 (462)
.| ++|.|+|. |.+|.+.++.++.. |.+|++..++ ....+.+++.|.... |....+..+.+ ...|
T Consensus 145 ~g-~~vlV~Ga~ggiG~~~~~~a~~~------G~~Vi~~~~~-~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d 216 (333)
T 1wly_A 145 PG-DYVLIHAAAGGMGHIMVPWARHL------GATVIGTVST-EEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVD 216 (333)
T ss_dssp TT-CEEEETTTTSTTHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEE
T ss_pred CC-CEEEEECCccHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCe
Confidence 46 89999995 99999999999988 8887766554 444566666664210 11111222222 2468
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 012479 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 181 vViLavpd~a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
+||.++... .++.....++++-.++..
T Consensus 217 ~vi~~~g~~----~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 217 VVYDSIGKD----TLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp EEEECSCTT----THHHHHHTEEEEEEEEEC
T ss_pred EEEECCcHH----HHHHHHHhhccCCEEEEE
Confidence 888887752 344445556665554444
No 479
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=88.94 E-value=0.75 Score=48.11 Aligned_cols=32 Identities=25% Similarity=0.451 Sum_probs=29.0
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEE
Q 012479 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK 144 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vi 144 (462)
..++| ++|+|.|+|++|...|+-|.+. |.+|+
T Consensus 231 ~~l~g-~~vaVqGfGnVG~~~a~~L~e~------GakvV 262 (440)
T 3aog_A 231 LQVEG-ARVAIQGFGNVGNAAARAFHDH------GARVV 262 (440)
T ss_dssp CCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEE
T ss_pred CCccC-CEEEEeccCHHHHHHHHHHHHC------CCEEE
Confidence 46889 9999999999999999999988 88776
No 480
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=88.83 E-value=2.4 Score=42.07 Aligned_cols=94 Identities=15% Similarity=0.153 Sum_probs=60.7
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceec-CCCcCCHhhhh---ccCCeEE
Q 012479 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI---SGSDLVL 183 (462)
Q Consensus 109 ~gikkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~eav---~~ADvVi 183 (462)
+| ++|.|+| .|.+|...++-++.. |.+|++.. . ++..+.+++.|.... |....+..+.+ ...|+||
T Consensus 183 ~g-~~VlV~Ga~G~vG~~~~qla~~~------Ga~Vi~~~-~-~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vi 253 (375)
T 2vn8_A 183 TG-KRVLILGASGGVGTFAIQVMKAW------DAHVTAVC-S-QDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFIL 253 (375)
T ss_dssp TT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEE-C-GGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHhC------CCEEEEEe-C-hHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEE
Confidence 56 8999999 799999999999988 88876554 3 355778888886320 11112233323 3578888
Q ss_pred EeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 012479 184 LLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 184 Lavpd~a~~~vl~eI~~~Lk~gaiL~~a~G 213 (462)
-++.... ..+......++++-.++..++
T Consensus 254 d~~g~~~--~~~~~~~~~l~~~G~iv~~g~ 281 (375)
T 2vn8_A 254 DNVGGST--ETWAPDFLKKWSGATYVTLVT 281 (375)
T ss_dssp ESSCTTH--HHHGGGGBCSSSCCEEEESCC
T ss_pred ECCCChh--hhhHHHHHhhcCCcEEEEeCC
Confidence 8887542 123444566777766655544
No 481
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=88.80 E-value=0.23 Score=51.13 Aligned_cols=69 Identities=14% Similarity=0.211 Sum_probs=47.4
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchh-HHHHHHcCceecCCCcCCHhhhhccCCeEEEee
Q 012479 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS-FAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (462)
Q Consensus 108 l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s-~~~A~~~G~~~~d~~~~~~~eav~~ADvViLav 186 (462)
+++ |+|.|||.|-.|.+.|+-|.+. |++|++.+.+.... ..... .|+....+. ...+.++++|+||+..
T Consensus 3 ~~~-~~v~viG~G~~G~~~a~~l~~~------G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~--~~~~~~~~~d~vV~s~ 72 (439)
T 2x5o_A 3 YQG-KNVVIIGLGLTGLSCVDFFLAR------GVTPRVMDTRMTPPGLDKLP-EAVERHTGS--LNDEWLMAADLIVASP 72 (439)
T ss_dssp CTT-CCEEEECCHHHHHHHHHHHHTT------TCCCEEEESSSSCTTGGGSC-TTSCEEESS--CCHHHHHTCSEEEECT
T ss_pred CCC-CEEEEEeecHHHHHHHHHHHhC------CCEEEEEECCCCcchhHHhh-CCCEEEECC--CcHHHhccCCEEEeCC
Confidence 577 9999999999999999999888 99887776543221 11122 466531011 1356677899999863
No 482
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=88.79 E-value=0.25 Score=49.60 Aligned_cols=66 Identities=23% Similarity=0.196 Sum_probs=42.7
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCC-chhHHHHHHcCceecCCCcCC---HhhhhccCCeEE
Q 012479 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SRSFAEARAAGFTEENGTLGD---IYETISGSDLVL 183 (462)
Q Consensus 108 l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~-~~s~~~A~~~G~~~~d~~~~~---~~eav~~ADvVi 183 (462)
+.+ ++|+|||.|..|..+++.+++. |+++++.+... ......+ +.+... ...| +.++++++|+|.
T Consensus 10 ~~~-~~IlIlG~G~lg~~la~aa~~l------G~~viv~d~~~~~p~~~~a--d~~~~~--~~~d~~~l~~~~~~~dvi~ 78 (377)
T 3orq_A 10 KFG-ATIGIIGGGQLGKMMAQSAQKM------GYKVVVLDPSEDCPCRYVA--HEFIQA--KYDDEKALNQLGQKCDVIT 78 (377)
T ss_dssp CTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCTTCTTGGGS--SEEEEC--CTTCHHHHHHHHHHCSEEE
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEECCCCChhhhhC--CEEEEC--CCCCHHHHHHHHHhCCcce
Confidence 456 9999999999999999999999 99887765432 2211111 222210 1222 345677889875
Q ss_pred E
Q 012479 184 L 184 (462)
Q Consensus 184 L 184 (462)
.
T Consensus 79 ~ 79 (377)
T 3orq_A 79 Y 79 (377)
T ss_dssp E
T ss_pred e
Confidence 4
No 483
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=88.77 E-value=2.7 Score=39.55 Aligned_cols=89 Identities=12% Similarity=0.091 Sum_probs=56.4
Q ss_pred CCCCEEEEEcccchHHHHHHHHH-HhhhhhcCCcEEEEEecCCchhHHHHHHc----C----ceecCCCcCCHhhhhccC
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVKVGLRKGSRSFAEARAA----G----FTEENGTLGDIYETISGS 179 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lr-ds~~~~g~G~~Vivg~r~~~~s~~~A~~~----G----~~~~d~~~~~~~eav~~A 179 (462)
+| .+|.-||+|.-+.+ ..|. .. |.+| ++.+.++...+.|++. | +... ..+..+.-...
T Consensus 64 ~~-~~vLDiGcG~G~~~--~~l~~~~------~~~v-~gvd~s~~~~~~a~~~~~~~~~~~~~~~~---~~d~~~~~~~f 130 (287)
T 1kpg_A 64 PG-MTLLDVGCGWGATM--MRAVEKY------DVNV-VGLTLSKNQANHVQQLVANSENLRSKRVL---LAGWEQFDEPV 130 (287)
T ss_dssp TT-CEEEEETCTTSHHH--HHHHHHH------CCEE-EEEESCHHHHHHHHHHHHTCCCCSCEEEE---ESCGGGCCCCC
T ss_pred Cc-CEEEEECCcccHHH--HHHHHHc------CCEE-EEEECCHHHHHHHHHHHHhcCCCCCeEEE---ECChhhCCCCe
Confidence 45 79999999984433 3333 44 5554 5677666656666542 2 2210 23444433668
Q ss_pred CeEEEe-----ecchhHHHHHHHHHhcCCCCcEEEE
Q 012479 180 DLVLLL-----ISDAAQADNYEKIFSCMKPNSILGL 210 (462)
Q Consensus 180 DvViLa-----vpd~a~~~vl~eI~~~Lk~gaiL~~ 210 (462)
|+|+.. +++.....+++++...||||-.+.+
T Consensus 131 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 131 DRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp SEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEE
T ss_pred eEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEE
Confidence 999876 4545667889999999999886543
No 484
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=88.69 E-value=1.6 Score=41.73 Aligned_cols=71 Identities=17% Similarity=0.144 Sum_probs=44.2
Q ss_pred CCEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCC-chhH---HHHHHcC-ceecCCCcCC---Hhhhhcc--C
Q 012479 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SRSF---AEARAAG-FTEENGTLGD---IYETISG--S 179 (462)
Q Consensus 111 ikkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~-~~s~---~~A~~~G-~~~~d~~~~~---~~eav~~--A 179 (462)
||+|.|.| .|.+|.++++.|.+. |.+|++..|.. .... +.....+ +......+.+ ..+++++ .
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 74 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQ------GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMP 74 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhC------CCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCC
Confidence 57899999 699999999999998 99887766532 1111 1111122 2110011223 3456777 9
Q ss_pred CeEEEeec
Q 012479 180 DLVLLLIS 187 (462)
Q Consensus 180 DvViLavp 187 (462)
|+||.+..
T Consensus 75 d~vih~A~ 82 (347)
T 1orr_A 75 DSCFHLAG 82 (347)
T ss_dssp SEEEECCC
T ss_pred CEEEECCc
Confidence 99998865
No 485
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=88.66 E-value=1.1 Score=38.81 Aligned_cols=90 Identities=16% Similarity=0.187 Sum_probs=58.5
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHH----cCc----eecCCCcCCHhhhh---c
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA----AGF----TEENGTLGDIYETI---S 177 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~----~G~----~~~d~~~~~~~eav---~ 177 (462)
++ ++|.-||+|. | .++..+.+. +.+ +++.+.++...+.+++ .|. ... ..+..+.+ .
T Consensus 33 ~~-~~vldiG~G~-G-~~~~~l~~~------~~~-v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~---~~d~~~~~~~~~ 99 (192)
T 1l3i_A 33 KN-DVAVDVGCGT-G-GVTLELAGR------VRR-VYAIDRNPEAISTTEMNLQRHGLGDNVTLM---EGDAPEALCKIP 99 (192)
T ss_dssp TT-CEEEEESCTT-S-HHHHHHHTT------SSE-EEEEESCHHHHHHHHHHHHHTTCCTTEEEE---ESCHHHHHTTSC
T ss_pred CC-CEEEEECCCC-C-HHHHHHHHh------cCE-EEEEECCHHHHHHHHHHHHHcCCCcceEEE---ecCHHHhcccCC
Confidence 55 8999999998 3 445555555 534 4566666666666655 232 210 23444433 3
Q ss_pred cCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 012479 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 178 ~ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
..|+|+..-+......+++++...|+||..+.+.
T Consensus 100 ~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~ 133 (192)
T 1l3i_A 100 DIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVT 133 (192)
T ss_dssp CEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEE
Confidence 5799998776566788899999999998765443
No 486
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=88.64 E-value=0.69 Score=45.26 Aligned_cols=92 Identities=14% Similarity=0.154 Sum_probs=59.7
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHH-HcCcee-cCCCc-CCHhhhhc-----cC
Q 012479 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AAGFTE-ENGTL-GDIYETIS-----GS 179 (462)
Q Consensus 109 ~gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~-~~G~~~-~d~~~-~~~~eav~-----~A 179 (462)
+| ++|.|+|. |.+|.+.++.++.. |.+|++..++ ....+.++ +.|... .|-.. .+..+.++ ..
T Consensus 155 ~g-~~vlI~Ga~g~iG~~~~~~a~~~------G~~V~~~~~~-~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~ 226 (345)
T 2j3h_A 155 EG-ETVYVSAASGAVGQLVGQLAKMM------GCYVVGSAGS-KEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGI 226 (345)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCE
T ss_pred CC-CEEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCC
Confidence 56 89999997 99999999999988 8887665554 44456666 567521 01110 12333332 47
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 180 DvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
|+||-++... .++.....++++-.++..+
T Consensus 227 d~vi~~~g~~----~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 227 DIYFENVGGK----MLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp EEEEESSCHH----HHHHHHTTEEEEEEEEECC
T ss_pred cEEEECCCHH----HHHHHHHHHhcCCEEEEEc
Confidence 9999888642 4556666777766655543
No 487
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=88.32 E-value=0.19 Score=51.85 Aligned_cols=79 Identities=15% Similarity=0.062 Sum_probs=55.7
Q ss_pred CEEEEEcc-cchHHHHHHHHHHhhhhhcCCc---EEEEEecCCchhHHHHHHcCceecCCCcCCHhhhhccCCeEEEeec
Q 012479 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI---VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~---~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav~~ADvViLavp 187 (462)
.||.|||. |..|..-+.-++.- |. +|.+.+++. ...|-. .+.+.++|+||.++.
T Consensus 215 ~kV~ViG~~G~vG~~A~~~a~~l------Ga~~~~V~v~D~~~-------~~~g~~---------~~~i~~aDivIn~vl 272 (394)
T 2qrj_A 215 PTVLIIGALGRCGSGAIDLLHKV------GIPDANILKWDIKE-------TSRGGP---------FDEIPQADIFINCIY 272 (394)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT------TCCGGGEEEECHHH-------HTTCSC---------CTHHHHSSEEEECCC
T ss_pred CeEEEEcCCCHHHHHHHHHHHhC------CCCcCceEEeeccc-------cccCCc---------hhhHhhCCEEEECcC
Confidence 58999999 99999988888776 86 777765531 111322 145779999999998
Q ss_pred chh-HHHHH-HHHHhcC-CCCcEEEEec
Q 012479 188 DAA-QADNY-EKIFSCM-KPNSILGLSH 212 (462)
Q Consensus 188 d~a-~~~vl-~eI~~~L-k~gaiL~~a~ 212 (462)
-.. ...++ ++....| |+|.+|+|++
T Consensus 273 ig~~aP~Lvt~e~v~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 273 LSKPIAPFTNMEKLNNPNRRLRTVVDVS 300 (394)
T ss_dssp CCSSCCCSCCHHHHCCTTCCCCEEEETT
T ss_pred cCCCCCcccCHHHHhcCcCCCeEEEEEe
Confidence 422 12333 3566778 9999999885
No 488
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=88.32 E-value=1.3 Score=44.69 Aligned_cols=35 Identities=14% Similarity=0.178 Sum_probs=30.0
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEe
Q 012479 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGL 147 (462)
Q Consensus 106 ~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~ 147 (462)
+.|++ ++|.|||+|-.|..++++|... |+ ++.+.+
T Consensus 30 ~kL~~-~~VlIvGaGGlGs~va~~La~a------GVg~ItlvD 65 (340)
T 3rui_A 30 DIIKN-TKVLLLGAGTLGCYVSRALIAW------GVRKITFVD 65 (340)
T ss_dssp HHHHT-CEEEEECCSHHHHHHHHHHHHT------TCCEEEEEC
T ss_pred HHHhC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEec
Confidence 57888 9999999999999999999998 77 455543
No 489
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=88.31 E-value=0.68 Score=48.71 Aligned_cols=72 Identities=15% Similarity=0.218 Sum_probs=39.7
Q ss_pred CEEEEEcccchHHH--HHHHHHHhhhhhcCCcEEEEEecCCchhHHH--------HHHcCc--eecCCCcCCHhhhhccC
Q 012479 112 NQIGVIGWGSQGPA--QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAE--------ARAAGF--TEENGTLGDIYETISGS 179 (462)
Q Consensus 112 kkIgIIG~G~mG~A--iA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~--------A~~~G~--~~~d~~~~~~~eav~~A 179 (462)
+||+|||.|+.|.+ +...|....+=.+.+.+++. .|.++...+. +...|. .. ..+.|..|++++|
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L-~Di~~~rl~~~~~~~~~~~~~~~~~~~i--~~t~d~~eAl~gA 77 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYL-MDVHERRLNASYILARKYVEELNSPVKV--VKTESLDEAIEGA 77 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEE-ECSCHHHHHHHHHHHHHHHHHHTCCCEE--EEESCHHHHHTTC
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEE-ECCCHHHHHHHHHHHHHHHHHcCCCeEE--EEeCCHHHHhCCC
Confidence 58999999998755 33334332110111224544 4444422211 122332 21 1246889999999
Q ss_pred CeEEEee
Q 012479 180 DLVLLLI 186 (462)
Q Consensus 180 DvViLav 186 (462)
|+||+.+
T Consensus 78 D~Vi~~~ 84 (477)
T 3u95_A 78 DFIINTA 84 (477)
T ss_dssp SEEEECC
T ss_pred CEEEECc
Confidence 9999986
No 490
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=88.23 E-value=1.1 Score=44.09 Aligned_cols=66 Identities=17% Similarity=0.166 Sum_probs=43.9
Q ss_pred CcccccccccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCCHhhhh
Q 012479 97 GRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI 176 (462)
Q Consensus 97 ~~~~f~~~~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~eav 176 (462)
..+.|.......+| +||++||+- .....+++. +.++.|..++.. .|... ....++++
T Consensus 128 ~~d~~~~~~~~~~g-~kV~vIG~f----P~i~~~~~~------~~~l~V~E~~p~--------~g~~p----~~~~~~~l 184 (270)
T 3l5o_A 128 MNDPFIMSQNEVKG-KKVGVVGHF----PHLESLLEP------ICDLSILEWSPE--------EGDYP----LPASEFIL 184 (270)
T ss_dssp -CCHHHHTTTTTTT-SEEEEESCC----TTHHHHHTT------TSEEEEEESSCC--------TTCEE----GGGHHHHG
T ss_pred ccCchhhhhcccCC-CEEEEECCc----hhHHHHHhc------CCCEEEEECCCC--------CCCCC----hhHHHHhh
Confidence 34456666677889 999999974 345566766 678888777532 23332 23455688
Q ss_pred ccCCeEEEe
Q 012479 177 SGSDLVLLL 185 (462)
Q Consensus 177 ~~ADvViLa 185 (462)
++||+||+.
T Consensus 185 p~~D~viiT 193 (270)
T 3l5o_A 185 PECDYVYIT 193 (270)
T ss_dssp GGCSEEEEE
T ss_pred ccCCEEEEE
Confidence 999998875
No 491
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=88.20 E-value=1.1 Score=45.19 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=31.0
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHHhhhhhcCCc-EEEEEec
Q 012479 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLR 148 (462)
Q Consensus 105 ~~~l~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~-~Vivg~r 148 (462)
.+.|++ .+|.|||+|-.|..++.+|..+ |+ ++.+.++
T Consensus 113 q~~L~~-~~VlvvG~GglGs~va~~La~a------Gvg~i~lvD~ 150 (353)
T 3h5n_A 113 QDKLKN-AKVVILGCGGIGNHVSVILATS------GIGEIILIDN 150 (353)
T ss_dssp HHHHHT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEEEC
T ss_pred HHHHhC-CeEEEECCCHHHHHHHHHHHhC------CCCeEEEECC
Confidence 467888 9999999999999999999998 76 5555543
No 492
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=88.12 E-value=0.31 Score=49.31 Aligned_cols=87 Identities=20% Similarity=0.188 Sum_probs=53.3
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcCCc---EEEEEecCC--chhHHHHHHcCceecCCCcCC-HhhhhccCCeEEE
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI---VVKVGLRKG--SRSFAEARAAGFTEENGTLGD-IYETISGSDLVLL 184 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~---~Vivg~r~~--~~s~~~A~~~G~~~~d~~~~~-~~eav~~ADvViL 184 (462)
.||+||| .|..|.-+.+-|.+. .+ ++....... .+.... .|... .+.+ ..+.++++|+||+
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h------~fp~~el~~~~s~~~aG~~~~~---~~~~~---~~~~~~~~~~~~~Dvvf~ 69 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDER------DFPASAVRFFASARSQGRKLAF---RGQEI---EVEDAETADPSGLDIALF 69 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT------TCCEEEEEEEECTTTSSCEEEE---TTEEE---EEEETTTSCCTTCSEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCCceEEEEEECcccCCCceee---cCCce---EEEeCCHHHhccCCEEEE
Confidence 6899999 799999999877765 33 333222111 111110 11100 0111 1234678999999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEEEEecc
Q 012479 185 LISDAAQADNYEKIFSCMKPNSILGLSHG 213 (462)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~gaiL~~a~G 213 (462)
|+|.....+..+.+. +.|..|++.++
T Consensus 70 a~~~~~s~~~a~~~~---~~G~~vID~Sa 95 (344)
T 3tz6_A 70 SAGSAMSKVQAPRFA---AAGVTVIDNSS 95 (344)
T ss_dssp CSCHHHHHHHHHHHH---HTTCEEEECSS
T ss_pred CCChHHHHHHHHHHH---hCCCEEEECCC
Confidence 999988888877654 45777887776
No 493
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=88.08 E-value=0.45 Score=46.47 Aligned_cols=32 Identities=34% Similarity=0.510 Sum_probs=29.4
Q ss_pred CEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecC
Q 012479 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK 149 (462)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~ 149 (462)
+||.|||.|.-|.+.|..|.+. |++|.|..+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~------G~~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH------GIKVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCCEEEEecC
Confidence 7899999999999999999999 9999888653
No 494
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=88.05 E-value=1.1 Score=44.47 Aligned_cols=91 Identities=19% Similarity=0.189 Sum_probs=56.4
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceec-CCCcCCHhhhh----c--cCC
Q 012479 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI----S--GSD 180 (462)
Q Consensus 109 ~gikkIgIIG~-G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~eav----~--~AD 180 (462)
.| ++|.|+|. |.+|.+.++.++.. |.+|++..+. ++..+.+++.|.... |....+..+.+ . ..|
T Consensus 170 ~g-~~vlV~GasggiG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D 241 (351)
T 1yb5_A 170 AG-ESVLVHGASGGVGLAACQIARAY------GLKILGTAGT-EEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGID 241 (351)
T ss_dssp TT-CEEEEETCSSHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEE
T ss_pred Cc-CEEEEECCCChHHHHHHHHHHHC------CCEEEEEeCC-hhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcE
Confidence 46 89999998 99999999999988 8887666554 444567777775310 11111222222 1 478
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 012479 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (462)
Q Consensus 181 vViLavpd~a~~~vl~eI~~~Lk~gaiL~~a 211 (462)
+||.++... .+.+....++++-.++..
T Consensus 242 ~vi~~~G~~----~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 242 IIIEMLANV----NLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp EEEESCHHH----HHHHHHHHEEEEEEEEEC
T ss_pred EEEECCChH----HHHHHHHhccCCCEEEEE
Confidence 888887643 234444555665444433
No 495
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=88.01 E-value=0.88 Score=45.37 Aligned_cols=72 Identities=11% Similarity=0.059 Sum_probs=51.3
Q ss_pred ccCCCCEEEEEcc---cchHHHHHHHHHHhhhhhcCCcEEEEEecC----CchhHHHHHHcCceecCCCcCCHhhhhccC
Q 012479 107 AFNGINQIGVIGW---GSQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFAEARAAGFTEENGTLGDIYETISGS 179 (462)
Q Consensus 107 ~l~gikkIgIIG~---G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~----~~~s~~~A~~~G~~~~d~~~~~~~eav~~A 179 (462)
.++| .||++||= |++..|++..+..- . |.++.+...+ ++...+.+++.|.... .+.+++|++++|
T Consensus 148 ~l~g-lkva~vGD~~~~rva~Sl~~~~~~~-~----G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~--~~~d~~eav~~a 219 (306)
T 4ekn_B 148 RIDG-IKIAFVGDLKYGRTVHSLVYALSLF-E----NVEMYFVSPKELRLPKDIIEDLKAKNIKFY--EKESLDDLDDDI 219 (306)
T ss_dssp CSTT-CEEEEESCTTTCHHHHHHHHHHHTS-S----SCEEEEECCGGGCCCHHHHHHHHHTTCCEE--EESCGGGCCTTC
T ss_pred CcCC-CEEEEEcCCCCCcHHHHHHHHHHhc-C----CCEEEEECCcccccCHHHHHHHHHcCCEEE--EEcCHHHHhcCC
Confidence 5789 99999997 58999999988652 0 6777765432 2334456677775421 146899999999
Q ss_pred CeEEEee
Q 012479 180 DLVLLLI 186 (462)
Q Consensus 180 DvViLav 186 (462)
|+|+...
T Consensus 220 Dvvy~~~ 226 (306)
T 4ekn_B 220 DVLYVTR 226 (306)
T ss_dssp SEEEECC
T ss_pred CEEEeCC
Confidence 9999753
No 496
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=87.97 E-value=1.4 Score=41.47 Aligned_cols=71 Identities=15% Similarity=0.119 Sum_probs=45.9
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCceecCCCcCC---HhhhhccCCeEEEeec
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVLLLIS 187 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~---~~eav~~ADvViLavp 187 (462)
|||.|+| .|.+|.++++.|.+. .|.+|++..|+.++... ....++......+.+ ..++++++|+||.+..
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~-----~g~~V~~~~R~~~~~~~-~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 74 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIAN-----HIDHFHIGVRNVEKVPD-DWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPS 74 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT-----TCTTEEEEESSGGGSCG-GGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhC-----CCCcEEEEECCHHHHHH-hhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 5799999 599999999998864 15678777776443211 112343221111233 4567889999999876
Q ss_pred c
Q 012479 188 D 188 (462)
Q Consensus 188 d 188 (462)
.
T Consensus 75 ~ 75 (289)
T 3e48_A 75 I 75 (289)
T ss_dssp C
T ss_pred C
Confidence 4
No 497
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=87.97 E-value=2.4 Score=41.57 Aligned_cols=90 Identities=13% Similarity=0.107 Sum_probs=59.1
Q ss_pred CEEEEE-cccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHcCcee-cCCCcCCHhhhh------ccCCeEE
Q 012479 112 NQIGVI-GWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE-ENGTLGDIYETI------SGSDLVL 183 (462)
Q Consensus 112 kkIgII-G~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~-~d~~~~~~~eav------~~ADvVi 183 (462)
++|.|. |.|.+|.+.++-++.. |.+|++..++ .+..+.+++.|... .+....+..+.+ ...|+||
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~------Ga~Vi~~~~~-~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vi 238 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE------GFRPIVTVRR-DEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFL 238 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH------TCEEEEEESC-GGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEE
Confidence 455444 8999999999999988 8887766554 44577888888631 011112333333 3689999
Q ss_pred EeecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 184 LLISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 184 Lavpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
-++..... ....+.++++-.++..+
T Consensus 239 d~~g~~~~----~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 239 DAVTGPLA----SAIFNAMPKRARWIIYG 263 (349)
T ss_dssp ESSCHHHH----HHHHHHSCTTCEEEECC
T ss_pred ECCCChhH----HHHHhhhcCCCEEEEEe
Confidence 99885443 44556777777666554
No 498
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=87.54 E-value=0.42 Score=47.93 Aligned_cols=69 Identities=7% Similarity=-0.082 Sum_probs=41.6
Q ss_pred CEEEEEc-ccchHHHHHHHHHHhhhhhcCCc--E-----EEEEecCCc--hhHHHHHH--cC---ceecCCCcCCHhhhh
Q 012479 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI--V-----VKVGLRKGS--RSFAEARA--AG---FTEENGTLGDIYETI 176 (462)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lrds~~~~g~G~--~-----Vivg~r~~~--~s~~~A~~--~G---~~~~d~~~~~~~eav 176 (462)
+||+|+| .|.+|.+++..|... ++ + +++.+.... .....+.+ +. +...-....+..+++
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~------~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~ 77 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNG------SVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAF 77 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTT------TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHT
T ss_pred eEEEEECCCCHHHHHHHHHHHhC------CCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHh
Confidence 6899999 899999999999876 44 2 444443321 12222221 11 110000024567889
Q ss_pred ccCCeEEEee
Q 012479 177 SGSDLVLLLI 186 (462)
Q Consensus 177 ~~ADvViLav 186 (462)
++||+||++-
T Consensus 78 ~daDvVvitA 87 (333)
T 5mdh_A 78 KDLDVAILVG 87 (333)
T ss_dssp TTCSEEEECC
T ss_pred CCCCEEEEeC
Confidence 9999999975
No 499
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=87.53 E-value=2.8 Score=37.99 Aligned_cols=89 Identities=15% Similarity=0.221 Sum_probs=55.0
Q ss_pred CCCCEEEEEcccchHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHHc----Cce----ecCCCcCCHhhh---hc
Q 012479 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA----GFT----EENGTLGDIYET---IS 177 (462)
Q Consensus 109 ~gikkIgIIG~G~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~~----G~~----~~d~~~~~~~ea---v~ 177 (462)
++ .+|.-||+|. | .++..|.+. +.+| ++.+.++...+.|++. |+. .. ..+..+. ..
T Consensus 55 ~~-~~vLDlGcG~-G-~~~~~la~~------~~~v-~~vD~s~~~~~~a~~~~~~~g~~~~v~~~---~~d~~~~~~~~~ 121 (204)
T 3njr_A 55 RG-ELLWDIGGGS-G-SVSVEWCLA------GGRA-ITIEPRADRIENIQKNIDTYGLSPRMRAV---QGTAPAALADLP 121 (204)
T ss_dssp TT-CEEEEETCTT-C-HHHHHHHHT------TCEE-EEEESCHHHHHHHHHHHHHTTCTTTEEEE---ESCTTGGGTTSC
T ss_pred CC-CEEEEecCCC-C-HHHHHHHHc------CCEE-EEEeCCHHHHHHHHHHHHHcCCCCCEEEE---eCchhhhcccCC
Confidence 45 8999999998 3 344455554 5555 5677666666655542 322 11 2333332 34
Q ss_pred cCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 012479 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (462)
Q Consensus 178 ~ADvViLavpd~a~~~vl~eI~~~Lk~gaiL~~a~ 212 (462)
..|+|++.... ... +++++...|+||-.+++..
T Consensus 122 ~~D~v~~~~~~-~~~-~l~~~~~~LkpgG~lv~~~ 154 (204)
T 3njr_A 122 LPEAVFIGGGG-SQA-LYDRLWEWLAPGTRIVANA 154 (204)
T ss_dssp CCSEEEECSCC-CHH-HHHHHHHHSCTTCEEEEEE
T ss_pred CCCEEEECCcc-cHH-HHHHHHHhcCCCcEEEEEe
Confidence 68999976533 333 8889999999988765443
No 500
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=87.42 E-value=2.5 Score=44.29 Aligned_cols=93 Identities=10% Similarity=0.108 Sum_probs=63.9
Q ss_pred ccCCCCEEEEEccc----------chHHHHHHHHHHhhhhhcCCcEEEEEecCCchhHHHHHH-cC------------ce
Q 012479 107 AFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-AG------------FT 163 (462)
Q Consensus 107 ~l~gikkIgIIG~G----------~mG~AiA~~Lrds~~~~g~G~~Vivg~r~~~~s~~~A~~-~G------------~~ 163 (462)
.++| ++|+|.|+- +-...++..|.+. |.+|.+.+..-.. .+++ .| +.
T Consensus 325 ~~~~-~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~------g~~v~~~DP~~~~---~~~~~~~~~~~~~~~~~~~~~ 394 (478)
T 2y0c_A 325 DLTG-RTFAIWGLAFKPNTDDMREAPSRELIAELLSR------GARIAAYDPVAQE---EARRVIALDLADHPSWLERLS 394 (478)
T ss_dssp CCTT-CEEEEECCSSSSSCCCCTTCHHHHHHHHHHHT------TCEEEEECTTTHH---HHHHHHHHHTTTCHHHHTTEE
T ss_pred cCCC-CEEEEEecccCCCCCccccChHHHHHHHHHHC------CCEEEEECCCccH---HHHHhhcccccccccccccee
Confidence 4688 999999973 3556778888877 8888776554221 2221 22 33
Q ss_pred ecCCCcCCHhhhhccCCeEEEeecchhHHH-HHHHHHhcCCCCcEEEEeccc
Q 012479 164 EENGTLGDIYETISGSDLVLLLISDAAQAD-NYEKIFSCMKPNSILGLSHGF 214 (462)
Q Consensus 164 ~~d~~~~~~~eav~~ADvViLavpd~a~~~-vl~eI~~~Lk~gaiL~~a~G~ 214 (462)
. +.+..+++++||+|+++|.-..... -++.+...|+. .+|.|.-++
T Consensus 395 ~----~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~-~~i~D~r~~ 441 (478)
T 2y0c_A 395 F----VDDEAQAARDADALVIVTEWKIFKSPDFVALGRLWKT-PVIFDGRNL 441 (478)
T ss_dssp E----CSSHHHHTTTCSEEEECSCCGGGGSCCHHHHHTTCSS-CEEEESSCC
T ss_pred e----cCCHHHHHhCCCEEEEecCChHhhccCHHHHHhhcCC-CEEEECCCC
Confidence 2 4578899999999999999776554 24567666664 678888765
Done!