Query 012481
Match_columns 462
No_of_seqs 115 out of 1325
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 10:17:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012481.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012481hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rtk_A 60 kDa chaperonin 2; he 100.0 1E-104 4E-109 845.5 39.5 453 5-462 52-514 (546)
2 1kp8_A Groel protein; chaperon 100.0 1E-102 4E-107 832.1 42.8 455 5-462 52-516 (547)
3 1we3_A CPN60(groel); chaperoni 100.0 1E-101 5E-106 824.7 45.7 455 5-462 52-518 (543)
4 1iok_A Chaperonin 60; chaperon 100.0 1E-102 4E-107 832.2 35.4 452 5-462 53-518 (545)
5 3p9d_C T-complex protein 1 sub 100.0 1.5E-87 5E-92 721.0 28.8 427 5-462 61-579 (590)
6 3iyg_H T-complex protein 1 sub 100.0 1.7E-85 5.9E-90 698.1 39.9 400 5-462 53-507 (515)
7 3ruv_A Chaperonin, CPN; double 100.0 1.2E-85 4E-90 703.5 37.8 397 5-462 61-512 (543)
8 3ko1_A Chaperonin; 9-fold symm 100.0 1.1E-85 3.9E-90 703.9 37.0 397 5-462 72-526 (553)
9 3iyg_B T-complex protein 1 sub 100.0 5.2E-85 1.8E-89 694.5 40.9 396 5-462 54-504 (513)
10 3aq1_B Thermosome subunit; gro 100.0 2E-85 6.9E-90 695.7 36.7 397 5-462 15-469 (500)
11 3p9d_A T-complex protein 1 sub 100.0 8.9E-86 3.1E-90 706.1 31.8 402 5-462 66-541 (559)
12 1a6d_A Thermosome (alpha subun 100.0 1.1E-84 3.8E-89 696.1 37.6 396 5-462 64-515 (545)
13 1q3q_A Thermosome alpha subuni 100.0 1.2E-84 4E-89 696.4 37.7 397 5-462 65-518 (548)
14 3p9d_D T-complex protein 1 sub 100.0 2.7E-85 9.1E-90 698.6 31.7 401 5-462 61-521 (528)
15 3iyg_E T-complex protein 1 sub 100.0 5.7E-84 2E-88 687.2 41.0 404 5-462 52-508 (515)
16 3iyg_A T-complex protein 1 sub 100.0 3.4E-84 1.2E-88 690.7 39.0 402 5-462 52-521 (529)
17 1a6d_B Thermosome (beta subuni 100.0 1.8E-84 6.3E-89 694.7 36.2 397 5-462 63-516 (543)
18 3iyg_D T-complex protein 1 sub 100.0 4.8E-84 1.6E-88 687.9 39.2 397 5-462 53-511 (518)
19 3iyg_Q T-complex protein 1 sub 100.0 6.9E-83 2.4E-87 678.5 39.7 403 5-462 53-505 (512)
20 3iyg_G T-complex protein 1 sub 100.0 1.2E-82 4.1E-87 676.7 39.8 397 5-462 51-507 (515)
21 3p9d_G T-complex protein 1 sub 100.0 2.6E-84 8.8E-89 693.6 26.5 399 5-462 66-520 (550)
22 3p9d_E T-complex protein 1 sub 100.0 2E-83 7E-88 688.2 33.2 403 5-462 87-551 (562)
23 3p9d_B T-complex protein 1 sub 100.0 4.7E-84 1.6E-88 689.6 28.2 396 5-462 60-511 (527)
24 3iyg_Z T-complex protein 1 sub 100.0 9.4E-83 3.2E-87 677.4 36.5 396 5-462 52-510 (517)
25 3p9d_F T-complex protein 1 sub 100.0 5.2E-82 1.8E-86 676.1 27.8 397 5-462 59-530 (546)
26 3p9d_H T-complex protein 1 sub 100.0 4.2E-81 1.4E-85 671.1 20.9 397 5-462 68-541 (568)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 2.1E-49 7.1E-54 360.1 14.7 189 140-328 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 7.6E-48 2.6E-52 350.5 16.3 185 143-327 12-200 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 1.4E-38 4.7E-43 276.6 15.2 144 145-288 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.9 6.4E-22 2.2E-26 182.0 13.2 145 138-336 2-174 (178)
31 1ass_A Thermosome; chaperonin, 99.8 2.2E-18 7.6E-23 155.4 13.2 127 143-292 1-154 (159)
No 1
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=1.3e-104 Score=845.50 Aligned_cols=453 Identities=32% Similarity=0.468 Sum_probs=421.9
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012481 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (462)
Q Consensus 5 ~~~~lk~~~~~~p~~~~~~~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~i~~G~~~a~~~~~~~ 83 (462)
..||||+|++.||++++. ..+++++|++||+++||||||+||||++||++|+++++ |+||+.|++||++|.+.++++
T Consensus 52 G~TIlk~i~v~hp~~n~g--Akll~e~a~~qd~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~ 129 (546)
T 3rtk_A 52 GVSIAKEIELEDPYEKIG--AELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTET 129 (546)
T ss_dssp ---------CCCHHHHHH--HHHHHHHHTSCC-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCChhhhHH--HHHHHHHHHhhhhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999996544 55669999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhccCcceeEecCCCccceeEEEeeEEEeccccCCcccccccc
Q 012481 84 LDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFTHKNK 163 (462)
Q Consensus 84 L~~~~~~v~~~~~l~~vA~ts~~~~~~l~~li~~a~~~vg~~~~I~v~~g~~~~d~~~~~~G~~~~~g~~~~~~~~~~~~ 163 (462)
|+++++|+++.++|.++|++|++ ++.+++++++|+.+++.+|.|+|+++++..+++++++||+||++|.||||++++++
T Consensus 130 L~~~s~~v~~~e~L~~vA~iS~~-~~~i~~liadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt~~e~ 208 (546)
T 3rtk_A 130 LLKGAKEVETKEQIAATAAISAG-DQSIGDLIAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDPER 208 (546)
T ss_dssp HHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCSBTTT
T ss_pred HHHhcccCCChHHHHhHeEEeCC-chHHHHHHHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCcccccCccc
Confidence 99999999999999999999998 88999999999999999999999988888789999999999999999999999999
Q ss_pred ceeeecCceEEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCcchhhHhhHHhhccCCCCcEEEEeecCcchhhhhhHH
Q 012481 164 KECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIME 243 (462)
Q Consensus 164 ~~~~l~~~~Il~~d~~i~~~~~i~~~le~i~~~g~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le 243 (462)
|+.+++||+|+++|.+|+++++++|+++++.++|+|||||+++|+++++++|+.|+++|.+++++||.|+||+.|+++|+
T Consensus 209 m~~~len~kIll~d~kIs~~~~l~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le 288 (546)
T 3rtk_A 209 QEAVLEDPYILLVSSKVSTVKDLLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQ 288 (546)
T ss_dssp TBEEEESCEEEEBSSEECCSTTTHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHH
T ss_pred CeeEecccEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----HHHHHHHh
Q 012481 244 DLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLA 319 (462)
Q Consensus 244 dla~~tG~~i~~~~~~~~~~~~~~~~LG~a~~v~i~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s----~~l~~Rl~ 319 (462)
|||++|||++++++.+++++++++++||+|++|+++++++++++||+++++++.|+++|+.++++++| ++|+|||+
T Consensus 289 ~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erla 368 (546)
T 3rtk_A 289 DMAILTGGQVISEEVGLTLENADLSLLGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLA 368 (546)
T ss_dssp HHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHH
T ss_pred HHHHHhCCEEeeccccCccccCCHhhCCeeEEEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHH
Confidence 99999999999998898999999999999999999999999999999999999999999999999988 99999999
Q ss_pred hhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHcCCcCChhHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHH
Q 012481 320 KLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNALKMA 399 (462)
Q Consensus 320 ~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~a~~~gvVpGGGa~el~~s~~L~~~~~~~~~~~~gi~~~a~AL~~~ 399 (462)
+|+|++|||+|||+|+++++|+||+++||||++|+++++|+|||||++|+++|++|++|+ .++++|+|+++|++||+.|
T Consensus 369 kl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~giVpGGGa~e~~~s~~L~~~~-~~g~eq~~i~~~a~ALe~i 447 (546)
T 3rtk_A 369 KLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQAAPTLDELK-LEGDEATGANIVKVALEAP 447 (546)
T ss_dssp HHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHTTGGGSTTSC-CCTTHHHHHHHHHHHTTHH
T ss_pred HhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCCcccCCcHHHHHHHHHHHHhc-cccHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999987 7899999999999999999
Q ss_pred HHHHHHhcCCChHHH-HHHHhcCCCCccccccC----CchhcCCccccccHHHHHHHHHHHHHHHhcC
Q 012481 400 AYLIASNAGVDGSVI-DKLLEQDSSDLGYNPAR----DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 462 (462)
Q Consensus 400 ~~~La~NaG~d~~~v-~~l~~~~~~~~G~d~~~----dm~~~gI~dP~~v~~~al~~A~~~A~~lL~i 462 (462)
|++||+|||+|+.++ ++|++. .+++|||+.+ ||++.|||||+.||+++|++|+|+|++||+|
T Consensus 448 p~~La~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~i 514 (546)
T 3rtk_A 448 LKQIAFNSGLEPGVVAEKVRNL-PAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTT 514 (546)
T ss_dssp HHHHHTTTTCCHHHHHHHHHHS-CTTEECCSSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCHHHHHHHHHhh-cCCEeEcCCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 999885 3568999987 9999999999999999999999999999986
No 2
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=1.2e-102 Score=832.09 Aligned_cols=455 Identities=34% Similarity=0.494 Sum_probs=436.6
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012481 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (462)
Q Consensus 5 ~~~~lk~~~~~~p~~~~~~~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~i~~G~~~a~~~~~~~ 83 (462)
..+|||+|++.||..++. ..+++++|++||+++||||||+||||++||++++++++ |+||+.|++||++|.+.++++
T Consensus 52 G~tIlk~i~~~hp~en~~--Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~ 129 (547)
T 1kp8_A 52 GVSVAREIELEDKFENMG--AQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEE 129 (547)
T ss_dssp HHHHHHHCCCSSHHHHHH--HHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccccChhhhHH--HHHHHHHHHhhccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999933322 33458999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhccCcceeEecCCCccceeEEEeeEEEeccccCCcccccccc
Q 012481 84 LDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFTHKNK 163 (462)
Q Consensus 84 L~~~~~~v~~~~~l~~vA~ts~~~~~~l~~li~~a~~~vg~~~~I~v~~g~~~~d~~~~~~G~~~~~g~~~~~~~~~~~~ 163 (462)
|+++++|+++.+.|.++|++|+++++.+++++++|+.+++++|.|+|++|++..|++++++|++||++|.||||+++|++
T Consensus 130 L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~liadAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~ 209 (547)
T 1kp8_A 130 LKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPET 209 (547)
T ss_dssp HHHHCBCCCSHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCSBTTT
T ss_pred HHHhCcCCCCHHHHHHHHHHhccchhHHHHHHHHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCccccccccCccc
Confidence 99999999889999999999998899999999999999999999999999999887799999999999999999999999
Q ss_pred ceeeecCceEEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCcchhhHhhHHhhccCCCCcEEEEeecCcchhhhhhHH
Q 012481 164 KECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIME 243 (462)
Q Consensus 164 ~~~~l~~~~Il~~d~~i~~~~~i~~~le~i~~~g~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le 243 (462)
|+.+++||+|+++|.+|+++++++|+++++.++|+||||++++|+++++++|+.|+++|.++|+|||.|+||+.|+++|+
T Consensus 210 m~~~lenp~Ill~d~~Is~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le 289 (547)
T 1kp8_A 210 GAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQ 289 (547)
T ss_dssp TBEEEESCEEECEESEECCGGGTHHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHH
T ss_pred CceEecCceEEEEcCcCCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----HHHHHHHh
Q 012481 244 DLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLA 319 (462)
Q Consensus 244 dla~~tG~~i~~~~~~~~~~~~~~~~LG~a~~v~i~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s----~~l~~Rl~ 319 (462)
|||++|||++++++.+++++++++++||+|++|+++++++++++||+++++++.|+++++.+++.++| |+|+|||+
T Consensus 290 ~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erla 369 (547)
T 1kp8_A 290 DIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVA 369 (547)
T ss_dssp HHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHH
T ss_pred HHHHHhCCeEecccccCCcccCCHHHCCceeEEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHH
Confidence 99999999999998888999999999999999999999999999999999999999999999999888 99999999
Q ss_pred hhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHcCCcCChhHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHH
Q 012481 320 KLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNALKMA 399 (462)
Q Consensus 320 ~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~a~~~gvVpGGGa~el~~s~~L~~~~~~~~~~~~gi~~~a~AL~~~ 399 (462)
||+|++|||+|||+|+++++|+||+++||||++|+++++|+|||||++|++++++|++++..++++|+|+++|++||+.|
T Consensus 370 kl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~ALe~i 449 (547)
T 1kp8_A 370 KLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNADQNVGIKVALRAMEAP 449 (547)
T ss_dssp HHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHTTHH
T ss_pred HhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCCEEeCCcHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988766889999999999999999
Q ss_pred HHHHHHhcCCChHHH-HHHHhcCCCCccccccC----CchhcCCccccccHHHHHHHHHHHHHHHhcC
Q 012481 400 AYLIASNAGVDGSVI-DKLLEQDSSDLGYNPAR----DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 462 (462)
Q Consensus 400 ~~~La~NaG~d~~~v-~~l~~~~~~~~G~d~~~----dm~~~gI~dP~~v~~~al~~A~~~A~~lL~i 462 (462)
|++||+|||+|+.++ ++|++. ++++|||+.+ ||++.|||||+.||+++|++|+++|++||+|
T Consensus 450 p~~la~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~i 516 (547)
T 1kp8_A 450 LRQIVLNCGEEPSVVANTVKGG-DGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITT 516 (547)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHS-CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred HHHHHHHcCCCHHHHHHHHHhc-CCCEeEeCCCCccccchhcCceechHhHHHHHHHHHHHHHHHHhH
Confidence 999999999999999 999875 5789999987 9999999999999999999999999999985
No 3
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=1.3e-101 Score=824.75 Aligned_cols=455 Identities=35% Similarity=0.509 Sum_probs=436.0
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012481 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (462)
Q Consensus 5 ~~~~lk~~~~~~p~~~~~~~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~i~~G~~~a~~~~~~~ 83 (462)
..+|||+|++.||..++. ..+++++|++||+++||||||+||||++||+++.+++. |+||+.|++||++|.+.++++
T Consensus 52 G~tIlk~i~~~hp~en~~--Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~ 129 (543)
T 1we3_A 52 GVTVAKEVELEDHLENIG--AQLLKEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEK 129 (543)
T ss_dssp HHHHHHHCCCSSHHHHHH--HHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccCChHHhHH--HHHHHHHHHhhheecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999933322 33448999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhccCcceeEecCCCccceeEEEeeEEEeccccCCcccccccc
Q 012481 84 LDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFTHKNK 163 (462)
Q Consensus 84 L~~~~~~v~~~~~l~~vA~ts~~~~~~l~~li~~a~~~vg~~~~I~v~~g~~~~d~~~~~~G~~~~~g~~~~~~~~~~~~ 163 (462)
|+++++|+++.++|.+||++|++ ++.+++++++|+.+++++|.|+|++|++..|++++++|++|++||.||||+++|++
T Consensus 130 L~~~s~~v~~~~~l~~vA~iS~~-~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~ 208 (543)
T 1we3_A 130 IKALAIPVEDRKAIEEVATISAN-DPEVGKLIADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVTNPET 208 (543)
T ss_dssp HHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCSBTTT
T ss_pred HHHhcccCCCHHHHHHhhhhhcC-CHHHHHHHHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCccccccccCccc
Confidence 99999999889999999999998 89999999999999999999999999998887899999999999999999999999
Q ss_pred ceeeecCceEEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCcchhhHhhHHhhccCCCCcEEEEeecCcchhhhhhHH
Q 012481 164 KECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIME 243 (462)
Q Consensus 164 ~~~~l~~~~Il~~d~~i~~~~~i~~~le~i~~~g~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le 243 (462)
|+.+++||+|+++|.+|+++++++++++++.++|+||||++++|+++++++|+.|+++|.++|+|||.|+||+.|+++|+
T Consensus 209 m~~~~en~~Ill~d~~Is~~~~l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le 288 (543)
T 1we3_A 209 MEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLK 288 (543)
T ss_dssp TBCCEEEEEEEEESSCBCCHHHHHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHH
T ss_pred CceeecCceEEEECCCcCCHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----HHHHHHHh
Q 012481 244 DLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLA 319 (462)
Q Consensus 244 dla~~tG~~i~~~~~~~~~~~~~~~~LG~a~~v~i~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s----~~l~~Rl~ 319 (462)
|||++|||++++++.+++++++++++||+|++|+++++++++++||++++.++.|+++++.+++.++| ++|+|||+
T Consensus 289 ~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erla 368 (543)
T 1we3_A 289 DIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLA 368 (543)
T ss_dssp HHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHH
T ss_pred HHHHHhCCceeeccccCCcccCCHHHCCCceEEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHH
Confidence 99999999999998889999999999999999999999999999999999999999999999999888 99999999
Q ss_pred hhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHcCCcCChhHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHH
Q 012481 320 KLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKM 398 (462)
Q Consensus 320 ~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~a~~~gvVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ 398 (462)
||+|++|||+|||+|+++++|+||+++||||++|+++++|+|||||++|++++++|++++.. ++++|+|+++|++||+.
T Consensus 369 kl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ 448 (543)
T 1we3_A 369 KLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGDEATGAKIVRRALEE 448 (543)
T ss_dssp HHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTH
T ss_pred hccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCccHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999875 89999999999999999
Q ss_pred HHHHHHHhcCCChHHH-HHHHhc-CCCCccccccC----CchhcCCccccccHHHHHHHHHHHHHHHhcC
Q 012481 399 AAYLIASNAGVDGSVI-DKLLEQ-DSSDLGYNPAR----DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 462 (462)
Q Consensus 399 ~~~~La~NaG~d~~~v-~~l~~~-~~~~~G~d~~~----dm~~~gI~dP~~v~~~al~~A~~~A~~lL~i 462 (462)
||++||+|||+|+.++ ++|++. +++++|||+.+ ||++.|||||+.||+++|++|+++|++||+|
T Consensus 449 ip~~La~NaG~d~~~vv~~l~~~h~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 518 (543)
T 1we3_A 449 PARQIAENAGYEGSVIVQQILAETKNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTT 518 (543)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHCCSCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred HHHHHHHHCCCCHHHHHHHHHHhcCCCCEEEeCCCCeecccccCCcCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 999874 35789999987 9999999999999999999999999999986
No 4
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=1.3e-102 Score=832.22 Aligned_cols=452 Identities=36% Similarity=0.537 Sum_probs=394.6
Q ss_pred HHHHhhhccccCc----cccccchhhhhhhhhhhhcccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHH
Q 012481 5 ACSLASRVRLINT----TGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADA 79 (462)
Q Consensus 5 ~~~~lk~~~~~~p----~~~~~~~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~i~~G~~~a~~~ 79 (462)
..+|||+|++.|| +|++ ++++|++||+++||||||+||||++||+++++++. |+||+.|++||++|.+.
T Consensus 53 G~tIlk~i~~~hp~en~~Akl------l~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~ 126 (545)
T 1iok_A 53 GVSVAKEIELSDKFENMGAQM------VREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAK 126 (545)
T ss_dssp HHHHHHHCCCSSHHHHHHHHH------HHHHHHHGGGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCChhhHHHHHH------HHHHHHhhccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 4689999999999 6664 48999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhccCcceeEecCCCccceeEEEeeEEEeccccCCcccc
Q 012481 80 VVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFT 159 (462)
Q Consensus 80 ~~~~L~~~~~~v~~~~~l~~vA~ts~~~~~~l~~li~~a~~~vg~~~~I~v~~g~~~~d~~~~~~G~~~~~g~~~~~~~~ 159 (462)
++++|+++++|+++.+.|.++|++|+++++.+++++++|+.+++++|.|+|++|++..|++++++|++||++|.||||++
T Consensus 127 a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt 206 (545)
T 1iok_A 127 VVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVT 206 (545)
T ss_dssp HHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHHHHHHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCC
T ss_pred HHHHHHHhcccCCCHHHHHHHHHhhcCCchhHHHHHHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCcccccccc
Confidence 99999999999988889999999999889999999999999999999999999999988779999999999999999999
Q ss_pred ccccceeeecCceEEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCcchhhHhhHHhhccCCCCcEEEEeecCcchhhh
Q 012481 160 HKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRK 239 (462)
Q Consensus 160 ~~~~~~~~l~~~~Il~~d~~i~~~~~i~~~le~i~~~g~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~ 239 (462)
+|++|+.+++||+|+++|.+|+++++++++++++.++|+||||++++|+++++++|+.|+++|.++|+|||.|+||+.|+
T Consensus 207 ~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~ 286 (545)
T 1iok_A 207 NADKMIAELEDAYILLHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRK 286 (545)
T ss_dssp CSSSSCEEEEEEEEEECSSCBCCCCC-----------CCCCEEEESCBC-----------------CEEEECSCCTTHHH
T ss_pred CcccCceeecCCeEEEEcCCcCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----HHHH
Q 012481 240 AIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLK 315 (462)
Q Consensus 240 ~~ledla~~tG~~i~~~~~~~~~~~~~~~~LG~a~~v~i~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s----~~l~ 315 (462)
++|+|||++|||++++++.+++++++++++||+|++|+++++++++++||+++++++.|+++++.+++.++| ++|+
T Consensus 287 ~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~ 366 (545)
T 1iok_A 287 AMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQ 366 (545)
T ss_dssp HHHHHHHHHHTC---------------CTTSEEEEEEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHH
T ss_pred HHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHH
Confidence 999999999999999998899999999999999999999999999999999999999999999999999888 9999
Q ss_pred HHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHcCCcCChhHHHHHHHHHHHHhcCCChhHHHHHHHHHHH
Q 012481 316 DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNA 395 (462)
Q Consensus 316 ~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~a~~~gvVpGGGa~el~~s~~L~~~~~~~~~~~~gi~~~a~A 395 (462)
|||+||+|++|||+|||+|+++++|+||+++||||++|+++++|+|||||++|++++++|++++..++++|+|+++|++|
T Consensus 367 erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~A 446 (545)
T 1iok_A 367 ERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRA 446 (545)
T ss_dssp HHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHGGGGGSCCCSSHHHHHHHHHHHHH
T ss_pred HHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHhccCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998876688999999999999
Q ss_pred HHHHHHHHHHhcCCChHHH-HHHHhcCCCCccccccC----CchhcCCccccccHHHHHHHHHHHHHHHhcC
Q 012481 396 LKMAAYLIASNAGVDGSVI-DKLLEQDSSDLGYNPAR----DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 462 (462)
Q Consensus 396 L~~~~~~La~NaG~d~~~v-~~l~~~~~~~~G~d~~~----dm~~~gI~dP~~v~~~al~~A~~~A~~lL~i 462 (462)
|+.||++||+|||+|+.++ ++|++.+++++|||+.+ ||++.|||||+.||+++|++|+++|++||+|
T Consensus 447 Le~ip~~La~NaG~d~~~vv~~l~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~i 518 (545)
T 1iok_A 447 LEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITT 518 (545)
T ss_dssp TTHHHHHHHHHHTSCHHHHHHHHHSCCSTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHhhcCCCeeEeCCCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999 99987656789999987 9999999999999999999999999999986
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=1.5e-87 Score=720.98 Aligned_cols=427 Identities=12% Similarity=0.136 Sum_probs=355.2
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchHHHhhhHHHHHHHhh-cC-CCChHHHHHHHHHHHHHHHH
Q 012481 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKA-LG-RANLTGLTQGFRMAADAVVR 82 (462)
Q Consensus 5 ~~~~lk~~~~~~p~~~~~~~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~l-i~-G~~P~~i~~G~~~a~~~~~~ 82 (462)
..||||+|++.||+|+++ +++|++||+++||||||+||||++||++|.++ +. |+||+.|++||++|.+.+++
T Consensus 61 G~TIlk~i~~~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~ 134 (590)
T 3p9d_C 61 GHAILREIDVAHPAAKSM------LELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALE 134 (590)
T ss_dssp HHHHHHHSCCCCHHHHTH------HHHTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCHHHHHH------HHHHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 78999999999999999999999999999999 99 99999999999999999999
Q ss_pred HHhccccccC--CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccCcc----------------eeEe--cCCCc
Q 012481 83 NLDCQARKIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWENDL----------------ITIF--DRKAL 136 (462)
Q Consensus 83 ~L~~~~~~v~--~~~~l~~vA~ts~~------~~~~l~~li~~a~~~vg~~~~----------------I~v~--~g~~~ 136 (462)
+|+++++|++ +.+.|.++|+||++ +++.|++++++|+.++++++. |+|+ .|++.
T Consensus 135 ~L~~~s~~v~~~~~e~L~~vA~tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~ 214 (590)
T 3p9d_C 135 VIKQVSKPVDVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDV 214 (590)
T ss_dssp HHHHHCCTTTTCCTHHHHHHHTTTSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCG
T ss_pred HHHHHhhccccCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCc
Confidence 9999999986 36889999998764 367899999999999987642 4443 46665
Q ss_pred cceeEEEeeEEEeccccCCccccccccceeeecCceEEEeccc-------------cCCHHHHHHHH-----------HH
Q 012481 137 YNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVIRQAS-----------LP 192 (462)
Q Consensus 137 ~d~~~~~~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Il~~d~~-------------i~~~~~i~~~l-----------e~ 192 (462)
+++++++||+||+++.+|.| +.+++||+|+++|.+ |++++++.+++ ++
T Consensus 215 -~ds~lv~Gmvfdk~~~~~~m-------~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vek 286 (590)
T 3p9d_C 215 -LDSRVLKGVLLNKDVVHPKM-------SRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQ 286 (590)
T ss_dssp -GGCBCCSSEEECCCCSCTTS-------CSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred -ccceeeeEEEEecccCCCCC-------cceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999888755 347999999999984 44566666555 67
Q ss_pred HHHcCCCEEEEecCcchhhHhhHHhhccCCCCcEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCCccCCCCCCcee
Q 012481 193 CMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS 272 (462)
Q Consensus 193 i~~~g~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~~~~~~~~~LG~ 272 (462)
+.++|.+|+|++++|+++++++|..|+ |++++++ |+.+|+|||++|||+++++ ++++++++||+
T Consensus 287 I~~~g~~vII~e~~I~d~Al~~L~k~~------I~av~~~-----~k~~le~ia~~TGa~iis~-----l~~~~~~~LG~ 350 (590)
T 3p9d_C 287 ILAVRPTLVITEKGVSDLAQHYLLKGG------CSVLRRV-----KKSDNNRIARVTGATIVNR-----VEDLKESDVGT 350 (590)
T ss_dssp HHTTCCSEECCSSCCCTHHHHHHHHTT------CCCCCCC-----CHHHHHHHHHHHTCCCCSC-----STTCCTTSCBC
T ss_pred HHhcCCcEEEecCCcCHHHHHHHHhcc------ceeeccC-----CHHHHHHHHHHhCCceeec-----ccCCCHHHhCC
Confidence 888886677777789999999999864 6677766 6888999999999999996 89999999999
Q ss_pred -eeEEE---EecceEEEEcCCCChhh--------------------------HHHHHHHHHHHhhhcccHHHHHHHhhhc
Q 012481 273 -CKRVI---ATMDNVVIIGGSGELVD--------------------------IQERCEQLRSTIKLSTSDKLKDRLAKLS 322 (462)
Q Consensus 273 -a~~v~---i~~~~~~~~~g~~~~~~--------------------------i~~r~~~l~~~l~~~~s~~l~~Rl~~l~ 322 (462)
|++|+ +++++|++++||++++. |+.|+++++++++.++| .+.+|+++|+
T Consensus 351 ~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~-~~~~~~~~l~ 429 (590)
T 3p9d_C 351 NCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSG-HHHHHHHHGS 429 (590)
T ss_dssp CCSEEECCEETTEECEEECC----------------------------------------------------------CC
T ss_pred cCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCC-HHHHHHHhhc
Confidence 99996 67899999999999888 99999999999998877 2346689999
Q ss_pred CCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHc-CCcCChhHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHH
Q 012481 323 GGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAA 400 (462)
Q Consensus 323 g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~a~~~-gvVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~ 400 (462)
|++|||+|||+|+++++|+||+++||||++|+++++ |+|||||++|+++|++|++|+.. ++++|+|+++|++||+.||
T Consensus 430 ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip 509 (590)
T 3p9d_C 430 GKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQWPYQAVADAMECIP 509 (590)
T ss_dssp CSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTHHHHHHHHHHTTHHH
T ss_pred CCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 59999999999999999998764 8999999999999999999
Q ss_pred HHHHHhcCCChHHH-HHHHhc---CCCCccccccC----CchhcCCccccccHHHHHHHHHHHHHHHhcC
Q 012481 401 YLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPAR----DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 462 (462)
Q Consensus 401 ~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~----dm~~~gI~dP~~v~~~al~~A~~~A~~lL~i 462 (462)
++||+|||+|+.++ .+|++. +++++|||+.+ ||++.|||||+.||+++|++|+++|++||+|
T Consensus 510 ~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 579 (590)
T 3p9d_C 510 RTLIQNAGGDPIRLLSQLRAKHAQGNFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRV 579 (590)
T ss_dssp HHHHHTTCSCHHHHHHHHHHHHTTSCTTCBCCTTSSSCBCTTTTTCCEEHHHHHHHHHHHHHHHHHTTSE
T ss_pred HHHHHHcCCCHHHHHHHHHHHHhcCCCCEeEeCCCCeEeehHHcCCeEcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 999873 56789999987 9999999999999999999999999999986
No 6
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.7e-85 Score=698.14 Aligned_cols=400 Identities=14% Similarity=0.153 Sum_probs=362.7
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012481 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (462)
Q Consensus 5 ~~~~lk~~~~~~p~~~~~~~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~i~~G~~~a~~~~~~~ 83 (462)
..+|||+|+++||+|+++ +++|++||+++||||||+||||++||++|.++++ |+||+.|++||++|.+.++++
T Consensus 53 G~tIlk~i~v~hP~Akll------~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 126 (515)
T 3iyg_H 53 GATILKLLDVVHPAAKTL------VDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNK 126 (515)
T ss_pred HHHHHHHccCCCHHHHHH------HHHHHHhhceeCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999966 7899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--C----HHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC---cceeEec--CCCccceeEEEeeE
Q 012481 84 LDCQARKIT--T----FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN---DLITIFD--RKALYNELNFVKGM 146 (462)
Q Consensus 84 L~~~~~~v~--~----~~~l~~vA~ts~~------~~~~l~~li~~a~~~vg~~---~~I~v~~--g~~~~d~~~~~~G~ 146 (462)
|+++++|++ + ++.|.++|+||++ +++.|++++++|+.+++.+ +.|+|+. |++. +++++++||
T Consensus 127 L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~-~ds~lv~G~ 205 (515)
T 3iyg_H 127 IKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGAL-EESQLVAGV 205 (515)
T ss_pred HHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCc-cceEEEeee
Confidence 999999984 5 5678999998774 4678999999999999876 6788864 5444 578999999
Q ss_pred EEeccccCCccccccccceeeecCceEEEeccc-------------cCCHHHH-----------HHHHHHHHHcCCCEEE
Q 012481 147 KLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSLLV 202 (462)
Q Consensus 147 ~~~~g~~~~~~~~~~~~~~~~l~~~~Il~~d~~-------------i~~~~~i-----------~~~le~i~~~g~~lvi 202 (462)
+||++|.||||.+.|+ +++||+|+++|.+ |++++++ .++++++.+.|+||||
T Consensus 206 ~~dk~~~~p~~~~~p~----~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi 281 (515)
T 3iyg_H 206 AFKKTFSYAGFEMQPK----KYHNPMIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVL 281 (515)
T ss_pred EEecCccCcccccCCc----cccccEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9999999999977665 7999999999984 6677665 6778999999999999
Q ss_pred EecCcchhhHhhHHhhccCCCCcEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEe---
Q 012481 203 VAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT--- 279 (462)
Q Consensus 203 i~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~~~~~~~~~LG~a~~v~i~--- 279 (462)
++++|++.++++|..+ +++++++. ++.+|+|||++|||+++++ ++++++++||+|++|++.
T Consensus 282 ~~~~I~dla~~~l~~~------gI~~v~~~-----~k~~leria~~tGa~ii~~-----l~~~~~~~LG~a~~v~~~~ig 345 (515)
T 3iyg_H 282 SKLPIGDVATQYFADR------DMFCAGRV-----PEEDLKRTMMACGGSIQTS-----VNALSSDVLGRCQVFEETQIG 345 (515)
T ss_pred ECCcccHHHHHHHHHc------CCcccccc-----cHHHHHHHHHHhCCEEeec-----cccCCHHHCCcccEEEEEEEc
Confidence 9999999888877542 36788877 6778999999999999996 899999999999999864
Q ss_pred cceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHc-
Q 012481 280 MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE- 358 (462)
Q Consensus 280 ~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~a~~~- 358 (462)
++++++++||+++ +.|||+|||+|+++++|+||+++||||++|+++++
T Consensus 346 ~~~~~~i~g~~~~-------------------------------~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~ 394 (515)
T 3iyg_H 346 GERYNFFTGCPKA-------------------------------KTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKND 394 (515)
T ss_pred CeEEEEEecCCCC-------------------------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 7899999999876 35899999999999999999999999999999998
Q ss_pred CCcCChhHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCccccccC--
Q 012481 359 GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPAR-- 431 (462)
Q Consensus 359 gvVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~-- 431 (462)
++|||||++|+++|++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+
T Consensus 395 ~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~ 474 (515)
T 3iyg_H 395 SVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTED 474 (515)
T ss_pred CeecCCcHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCc
Confidence 59999999999999999999876 899999999999999999999999999999999 999874 34678999987
Q ss_pred --CchhcCCccccccHHHHHHHHHHHHHHHhcC
Q 012481 432 --DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 462 (462)
Q Consensus 432 --dm~~~gI~dP~~v~~~al~~A~~~A~~lL~i 462 (462)
||++.|||||+.||+++|++|+++|++||+|
T Consensus 475 ~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~i 507 (515)
T 3iyg_H 475 IADNFEAFVWEPAMVRINALTAASEAACLIVSV 507 (515)
T ss_pred ccccHhccCEECHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999986
No 7
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=1.2e-85 Score=703.47 Aligned_cols=397 Identities=18% Similarity=0.240 Sum_probs=364.8
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012481 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (462)
Q Consensus 5 ~~~~lk~~~~~~p~~~~~~~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~i~~G~~~a~~~~~~~ 83 (462)
..||||+|++.||+||++ +++|++||+++||||||+||||++||++|.++++ |+||+.|++||++|.+.++++
T Consensus 61 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 134 (543)
T 3ruv_A 61 GVTILREMSVEHPAAKML------IEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQEL 134 (543)
T ss_dssp HHHHHHHSCCCCHHHHHH------HHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCcCHHHHHH------HHHHHHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999966 7899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC-cc-----eeEe--cCCCccceeEEEeeEE
Q 012481 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-DL-----ITIF--DRKALYNELNFVKGMK 147 (462)
Q Consensus 84 L~~~~~~v~--~~~~l~~vA~ts~~~------~~~l~~li~~a~~~vg~~-~~-----I~v~--~g~~~~d~~~~~~G~~ 147 (462)
|+++++|++ +.+.|.++|+||+++ ++.|++++++|+.+++.+ |. |+|+ .|++. +++++++|++
T Consensus 135 L~~~s~~v~~~d~~~L~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~-~ds~lv~G~v 213 (543)
T 3ruv_A 135 LKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASI-DDTELIKGVL 213 (543)
T ss_dssp HHHHCEECCTTCHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCG-GGCEEESSEE
T ss_pred HHHhhCCCCCCCHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCc-ccceeecceE
Confidence 999999987 789999999999864 789999999999999876 64 7776 45554 5799999999
Q ss_pred EeccccCCccccccccceeeecCceEEEeccc-------------cCCHHH-----------HHHHHHHHHHcCCCEEEE
Q 012481 148 LEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNV-----------IRQASLPCMMQGQSLLVV 203 (462)
Q Consensus 148 ~~~g~~~~~~~~~~~~~~~~l~~~~Il~~d~~-------------i~~~~~-----------i~~~le~i~~~g~~lvii 203 (462)
||++|.||||++ +++||+|+++|.+ |+++++ +.++++++.++|+||||+
T Consensus 214 ~dk~~~~~~m~~-------~~~n~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~ 286 (543)
T 3ruv_A 214 VDKERVSAQMPK-------KVTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFC 286 (543)
T ss_dssp ESCCCSCTTSCS-------EEEEEEEEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred EeccccCccccc-------cccCcEEEEEcccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 999999999843 7999999999984 566655 667789999999999999
Q ss_pred ecCcchhhHhhHHhhccCCCCcEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEe---c
Q 012481 204 AEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---M 280 (462)
Q Consensus 204 ~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~~~~~~~~~LG~a~~v~i~---~ 280 (462)
+++|+++++++|..+ ++++|+++ ++++|+|||++|||+++++ ++++++++||+|++|++. +
T Consensus 287 ~~~I~~~al~~L~~~------gI~~v~~v-----~k~~le~ia~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ig~ 350 (543)
T 3ruv_A 287 QKGIDDLAQHYLAKE------GIVAARRV-----KKSDMEKLAKATGANVIAA-----IAALSAQDLGDAGLVEERKISG 350 (543)
T ss_dssp SSCBCHHHHHHHHHT------TCEEECSC-----CHHHHHHHHHHHCCCEESC-----GGGCCGGGCEEEEEEEEEEETT
T ss_pred eCCccHHHHHHHHHc------CcEEEeeC-----CHHHHHHHHHHhCCceecc-----cccCCHHHCCcccEEEEEEeCC
Confidence 999999999999853 48899988 6778999999999999996 999999999999999865 8
Q ss_pred ceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHcC-
Q 012481 281 DNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG- 359 (462)
Q Consensus 281 ~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~a~~~g- 359 (462)
++++|++||++++ .+||+|||+|+++++|+||+++||||++|+++++|
T Consensus 351 ~~~~~i~g~~~~~-------------------------------~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~ 399 (543)
T 3ruv_A 351 DSMIFVEECKHPK-------------------------------AVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGR 399 (543)
T ss_dssp EEEEEEECCSSCS-------------------------------SEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCE
T ss_pred ceEEEEECCCCCc-------------------------------eeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 8999999998864 48999999999999999999999999999999999
Q ss_pred CcCChhHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCccccccC--
Q 012481 360 IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYNPAR-- 431 (462)
Q Consensus 360 vVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~----~~~~~G~d~~~-- 431 (462)
+|||||++|+++|++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+
T Consensus 400 iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~ 479 (543)
T 3ruv_A 400 IVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGA 479 (543)
T ss_dssp EEETTTHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCS
T ss_pred eecCCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCc
Confidence 9999999999999999999875 899999999999999999999999999999999 999863 34689999987
Q ss_pred --CchhcCCccccccHHHHHHHHHHHHHHHhcC
Q 012481 432 --DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 462 (462)
Q Consensus 432 --dm~~~gI~dP~~v~~~al~~A~~~A~~lL~i 462 (462)
||++.|||||+.||+++|++|+++|++||+|
T Consensus 480 ~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~i 512 (543)
T 3ruv_A 480 VEDMCENGVVEPLRVKTQAIQSAAESTEMLLRI 512 (543)
T ss_dssp EEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTC
T ss_pred cccHHHcCCEecHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999997
No 8
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=1.1e-85 Score=703.94 Aligned_cols=397 Identities=19% Similarity=0.263 Sum_probs=365.1
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012481 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (462)
Q Consensus 5 ~~~~lk~~~~~~p~~~~~~~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~i~~G~~~a~~~~~~~ 83 (462)
..+|||+|+++||+||++ +++|++||+++||||||+||||++||++|.++++ |+||+.|++||++|.+.++++
T Consensus 72 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 145 (553)
T 3ko1_A 72 GATILDKMDLQHPAAKLL------VQIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQT 145 (553)
T ss_dssp HHHHHHSSCCCSHHHHHH------HHHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhhhccChhHHHH------HHHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHH
Confidence 468999999999999966 7899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC--cc-------eeEe--cCCCccceeEEEe
Q 012481 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN--DL-------ITIF--DRKALYNELNFVK 144 (462)
Q Consensus 84 L~~~~~~v~--~~~~l~~vA~ts~~~------~~~l~~li~~a~~~vg~~--~~-------I~v~--~g~~~~d~~~~~~ 144 (462)
|+++++|++ +.+.|.++|+||+++ ++.|++++++|+.+++.+ |. |+|+ .|++. +++++++
T Consensus 146 L~~~s~~v~~~d~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~-~ds~lv~ 224 (553)
T 3ko1_A 146 IQELAQTVSINDTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSI-NDTQLVY 224 (553)
T ss_dssp HHTTCEECCTTCHHHHHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCG-GGCEEES
T ss_pred HHHhcCCCCCCcHHHHHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCcc-ccceeeE
Confidence 999999987 789999999999875 678999999999999875 65 7886 45454 5799999
Q ss_pred eEEEeccccCCccccccccceeeecCceEEEecc-------------ccCCHHH-----------HHHHHHHHHHcCCCE
Q 012481 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDT-------------KISNSNV-----------IRQASLPCMMQGQSL 200 (462)
Q Consensus 145 G~~~~~g~~~~~~~~~~~~~~~~l~~~~Il~~d~-------------~i~~~~~-----------i~~~le~i~~~g~~l 200 (462)
||+||++|.||||++ +++||+|+++|. +|+++++ +.++++++.+.|+||
T Consensus 225 G~v~dk~~~~~~m~~-------~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~v 297 (553)
T 3ko1_A 225 GIVVDKEVVHPGMPK-------RLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANV 297 (553)
T ss_dssp EEEECSCBSCTTSCS-------CCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSE
T ss_pred EEEecccccCCCCcc-------ccccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceE
Confidence 999999999999843 699999999998 4667766 567789999999999
Q ss_pred EEEecCcchhhHhhHHhhccCCCCcEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEe-
Q 012481 201 LVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT- 279 (462)
Q Consensus 201 vii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~~~~~~~~~LG~a~~v~i~- 279 (462)
||++++|+++++++|..+ ++++|+++ ++++|+|||++|||+++++ ++++++++||+|++|++.
T Consensus 298 vI~~~~I~~~al~~L~~~------gI~~v~~v-----~k~~leria~~tGa~ivs~-----l~~l~~~~LG~a~~v~~~~ 361 (553)
T 3ko1_A 298 IICQKGIDEVAQSYLAKK------GVLAVRRA-----KKSDLEKLARATGGRVVSN-----IDEISEQDLGYASLIEERK 361 (553)
T ss_dssp EECSSCBCSHHHHHHHHH------TCEEECCC-----CHHHHHHHHTTTTCCEESC-----GGGCCSSSSEECSEEECCC
T ss_pred EEeccChHHHHHHHHHhc------chhhhhhh-----hhhhHHHHHHhhCCeeecc-----cccCChhhcchHHHHHHhh
Confidence 999999999999999864 37899988 5777999999999999996 999999999999999865
Q ss_pred --cceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHH
Q 012481 280 --MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKE 357 (462)
Q Consensus 280 --~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~a~~ 357 (462)
+++++|++||++++ .+||+|||+|+++++|+||+++||||++|++++
T Consensus 362 ig~d~~~~i~g~~~~~-------------------------------~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~ 410 (553)
T 3ko1_A 362 VGEDKMVFVEGAKNPK-------------------------------SISILIRGGLERLVDETERALRDALGTVADVIK 410 (553)
T ss_dssp CSSSCCEEEESCSSSS-------------------------------CEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEEeccCCCCc-------------------------------eEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 88999999998764 489999999999999999999999999999999
Q ss_pred cC-CcCChhHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhcC---C-CCcccccc
Q 012481 358 EG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQD---S-SDLGYNPA 430 (462)
Q Consensus 358 ~g-vVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~~---~-~~~G~d~~ 430 (462)
+| +|||||++|++++++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++.+ + +++|||+.
T Consensus 411 ~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~ 490 (553)
T 3ko1_A 411 DGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLY 490 (553)
T ss_dssp HCEEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETT
T ss_pred cCceecCCceeEeHHHHHHHHhccccCChhHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEee
Confidence 99 9999999999999999999875 899999999999999999999999999999999 9998742 3 67999998
Q ss_pred C----CchhcCCccccccHHHHHHHHHHHHHHHhcC
Q 012481 431 R----DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 462 (462)
Q Consensus 431 ~----dm~~~gI~dP~~v~~~al~~A~~~A~~lL~i 462 (462)
+ ||++.|||||+.||+++|++|+++|++||+|
T Consensus 491 ~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 526 (553)
T 3ko1_A 491 AGQPVDMWQKGVIEPALVKMNAIKAATEAATLVLRI 526 (553)
T ss_dssp TTEEEESGGGSCEEETTHHHHHHHHHHHHHHHHHHE
T ss_pred cCCchHHHHhCccchhhhhhhhhhhcchhheEEEeh
Confidence 7 9999999999999999999999999999986
No 9
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=5.2e-85 Score=694.54 Aligned_cols=396 Identities=16% Similarity=0.192 Sum_probs=361.2
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012481 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (462)
Q Consensus 5 ~~~~lk~~~~~~p~~~~~~~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~i~~G~~~a~~~~~~~ 83 (462)
..||||+|++.||+||++ +++|++||+++||||||+||||++||++|.++++ |+||+.|++||++|.+.++++
T Consensus 54 G~tIlk~i~v~hp~Akll------~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 127 (513)
T 3iyg_B 54 GATILKNIGVDNPAAKVL------VDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQA 127 (513)
T ss_pred HHHHHHHccccCHHHHHH------HHHHHHhhhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999966 7899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC-----CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC---cceeEec--CCCccceeEEEeeEE
Q 012481 84 LDCQARKIT-----TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN---DLITIFD--RKALYNELNFVKGMK 147 (462)
Q Consensus 84 L~~~~~~v~-----~~~~l~~vA~ts~~------~~~~l~~li~~a~~~vg~~---~~I~v~~--g~~~~d~~~~~~G~~ 147 (462)
|+++++|++ +.+.|.++|+||++ +++.|++++++|+.+++++ +.|+|+. |++. +++++++||+
T Consensus 128 L~~~s~~v~~~~~~~~~~l~~va~tslssK~~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~-~ds~lv~G~v 206 (513)
T 3iyg_B 128 LLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSL-ADSYLDEGFL 206 (513)
T ss_pred HHHhCcCcccccccCHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCc-cceeEEeeEE
Confidence 999999986 56889999997764 3578999999999999987 7788864 5554 5689999999
Q ss_pred EeccccCCccccccccceeeecCceEEEecc--------------ccCCHHHHHH-----------HHHHHHHcCCCEEE
Q 012481 148 LEWGLKSPYFFTHKNKKECVLDGALVLIYDT--------------KISNSNVIRQ-----------ASLPCMMQGQSLLV 202 (462)
Q Consensus 148 ~~~g~~~~~~~~~~~~~~~~l~~~~Il~~d~--------------~i~~~~~i~~-----------~le~i~~~g~~lvi 202 (462)
||++|.+| |+ .+++||+|+++|. ++++++++.+ +++++.++|+||||
T Consensus 207 ~dk~~~~~-m~-------~~~en~kIll~~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi 278 (513)
T 3iyg_B 207 LDKKIGVN-QP-------KRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFI 278 (513)
T ss_pred EeccccCC-Cc-------eeecCceEEEEcCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 99999988 42 4799999999998 4667766654 68889999999999
Q ss_pred EecCcchhhHhhHHhhccCCCCcEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEE---Ee
Q 012481 203 VAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---AT 279 (462)
Q Consensus 203 i~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~~~~~~~~~LG~a~~v~---i~ 279 (462)
++++|+++++++|..+ +|++||+|+ +.+|+|||++|||+++++ ++++++++||+|++|+ ++
T Consensus 279 ~~~~I~~~al~~L~~~------~I~av~~~~-----~~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~ig 342 (513)
T 3iyg_B 279 NRQLIYNYPEQLFGAA------GVMAIEHAD-----FVGVERLALVTGGEIAST-----FDHPELVKLGSCKLIEEVMIG 342 (513)
T ss_pred EcCCccHHHHHHHHHc------CceEEecCC-----HHHHHHHHHHhCCEEecc-----cccCCHhHCCcccEEEEEEEC
Confidence 9999999999999863 599999996 345999999999999996 8999999999999997 67
Q ss_pred cceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHc-
Q 012481 280 MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE- 358 (462)
Q Consensus 280 ~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~a~~~- 358 (462)
++++++++||+++ +.|||+|||+|+++++|+||+++||+|++|+++++
T Consensus 343 ~~~~~~~~g~~~~-------------------------------~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~ 391 (513)
T 3iyg_B 343 EDKLIHFSGVALG-------------------------------EACTIVLRGATQQILDEAERSLHDALCVLAQTVKDS 391 (513)
T ss_pred CeEEEEEecCCCC-------------------------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8899999998764 57999999999999999999999999999999998
Q ss_pred CCcCChhHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCccccccC--
Q 012481 359 GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPAR-- 431 (462)
Q Consensus 359 gvVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~-- 431 (462)
++|||||++|++++++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+
T Consensus 392 ~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~ 471 (513)
T 3iyg_B 392 RTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGT 471 (513)
T ss_pred cEEeCCcHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCC
Confidence 69999999999999999999875 899999999999999999999999999999999 999874 45689999987
Q ss_pred --CchhcCCccccccHHHHHHHHHHHHHHHhcC
Q 012481 432 --DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 462 (462)
Q Consensus 432 --dm~~~gI~dP~~v~~~al~~A~~~A~~lL~i 462 (462)
||++.|||||+.||+++|++|+++|++||+|
T Consensus 472 ~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~i 504 (513)
T 3iyg_B 472 IGDMSVLGITESFQVKRQVLLSAAEAAEVILRV 504 (513)
T ss_pred ccchHhccCEecHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999986
No 10
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=2e-85 Score=695.74 Aligned_cols=397 Identities=17% Similarity=0.234 Sum_probs=335.9
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012481 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (462)
Q Consensus 5 ~~~~lk~~~~~~p~~~~~~~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~i~~G~~~a~~~~~~~ 83 (462)
..||||+|++.||+||++ +++|++||+++||||||+||||++||+++.++++ |+||+.|++||++|.+.++++
T Consensus 15 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 88 (500)
T 3aq1_B 15 GATILKEMDIQHPAAKMI------VEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRHAAEKCREI 88 (500)
T ss_dssp ----------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCcCCCHHHHHH------HHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC--cc--------eeEe--cCCCccceeEEE
Q 012481 84 LDCQARKIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN--DL--------ITIF--DRKALYNELNFV 143 (462)
Q Consensus 84 L~~~~~~v~--~~~~l~~vA~ts~~------~~~~l~~li~~a~~~vg~~--~~--------I~v~--~g~~~~d~~~~~ 143 (462)
|+++++|++ +.+.|.++|+||++ +++.|++++++|+.+++.+ |. |+|+ +|++. ++++++
T Consensus 89 L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~~G~~~-~ds~lv 167 (500)
T 3aq1_B 89 LETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGGSI-DDSELI 167 (500)
T ss_dssp HHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEEESSCG-GGCEEE
T ss_pred HHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEecCCCc-cceEEE
Confidence 999999986 48899999998754 4678999999999999865 43 5666 78777 579999
Q ss_pred eeEEEeccccCCccccccccceeeecCceEEEeccc-------------cCCHHHH-----------HHHHHHHHHcCCC
Q 012481 144 KGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQS 199 (462)
Q Consensus 144 ~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Il~~d~~-------------i~~~~~i-----------~~~le~i~~~g~~ 199 (462)
+|++|+++|.||||++ +++||+|+++|.+ |++++++ .++++++.++|+|
T Consensus 168 ~G~v~dk~~~~~~m~~-------~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~ 240 (500)
T 3aq1_B 168 DGLVIDKERSHPNMPE-------KVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASGAN 240 (500)
T ss_dssp SEEEESCCCSSTTSCS-------EEEEEEEEEESSCBCC-------------------------CHHHHHHHHHHTTCCS
T ss_pred eeeEEeecCCCCCCcc-------cccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 9999999999999843 7899999999998 6666664 8999999999999
Q ss_pred EEEEecCcchhhHhhHHhhccCCCCcEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEe
Q 012481 200 LLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT 279 (462)
Q Consensus 200 lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~~~~~~~~~LG~a~~v~i~ 279 (462)
|||++++|+++++++|..|+ |++|++. ++++|+|||++|||+++++ ++++++++||+|++|++.
T Consensus 241 lvi~~~~I~~~al~~L~~~~------I~av~~~-----~k~~le~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~ 304 (500)
T 3aq1_B 241 VVFCQKGIDDMAQYYIEKAG------IYAVRRV-----KKSDLKRLSKVTGATIIQD-----LDQITTEDVGTAGLVEEK 304 (500)
T ss_dssp EEEESSCBCHHHHHHHHHTT------CEEECSC-----CHHHHHHHHHHHCCCCBSC-----TTCCCSTTCEEEEEEEEE
T ss_pred EEEECCCcCHHHHHHHHHCC------EEEEEeC-----CHHHHHHHHHHhCCeEecc-----cccCCHhHCCCceEEEEE
Confidence 99999999999999999864 8899887 6788999999999999996 899999999999999875
Q ss_pred ---cceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHH
Q 012481 280 ---MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAK 356 (462)
Q Consensus 280 ---~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~a~ 356 (462)
++++++++||+++ +.|||+|||+|+++++|+||+++||+|++|+++
T Consensus 305 ~ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~ 353 (500)
T 3aq1_B 305 EVRGGKMTYVTGCQNS-------------------------------KAVTVLLHGGTEHVVDSLDHALNDALHVVGVVI 353 (500)
T ss_dssp ECSSSEEEEEEEETTC-------------------------------CCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCeEEEEEECCCCC-------------------------------ceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999998865 579999999999999999999999999999999
Q ss_pred HcC-CcCChhHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCcccccc
Q 012481 357 EEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPA 430 (462)
Q Consensus 357 ~~g-vVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~ 430 (462)
++| +|||||++|++++++|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.
T Consensus 354 ~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~ 433 (500)
T 3aq1_B 354 EDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEALEVIPVALAENAGLDPIDIMVELRSQHEKGNKNAGLNVY 433 (500)
T ss_dssp HHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTCTTEEECTT
T ss_pred HCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeeEeCC
Confidence 999 9999999999999999999865 899999999999999999999999999999999 999863 4468999998
Q ss_pred C----CchhcCCccccccHHHHHHHHHHHHHHHhcC
Q 012481 431 R----DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 462 (462)
Q Consensus 431 ~----dm~~~gI~dP~~v~~~al~~A~~~A~~lL~i 462 (462)
+ ||++.|||||+.||+++|++|+++|++||+|
T Consensus 434 ~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 469 (500)
T 3aq1_B 434 TGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRI 469 (500)
T ss_dssp TCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 7 9999999999999999999999999999997
No 11
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=8.9e-86 Score=706.08 Aligned_cols=402 Identities=17% Similarity=0.245 Sum_probs=365.7
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012481 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (462)
Q Consensus 5 ~~~~lk~~~~~~p~~~~~~~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~i~~G~~~a~~~~~~~ 83 (462)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||++|.++++ |+||+.|++||++|.+.++++
T Consensus 66 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 139 (559)
T 3p9d_A 66 GATILSLLDVQHPAGKIL------VELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRF 139 (559)
T ss_dssp HHHHHHHHCCCSHHHHHH------HHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHH------HHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999966 7899999999999999999999999999999999 999999999999999999999
Q ss_pred Hhc-cccccCC--HHHHHHHHHHhcCC------ChhHHHHHHHHHHhhcc-----Ccc-----eeEec--CCCccceeEE
Q 012481 84 LDC-QARKITT--FEEIAQVGTTAANG------DGEIGELIAKVFEKGWE-----NDL-----ITIFD--RKALYNELNF 142 (462)
Q Consensus 84 L~~-~~~~v~~--~~~l~~vA~ts~~~------~~~l~~li~~a~~~vg~-----~~~-----I~v~~--g~~~~d~~~~ 142 (462)
|++ +++|++. .+.|.++|+||+++ ++.|++++++|+.++++ ++. |+|.. |++.. ++++
T Consensus 140 L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~-ds~l 218 (559)
T 3p9d_A 140 INEVLSTSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSAT-ESLL 218 (559)
T ss_dssp HHHHTGGGSCC--CTTHHHHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSS-CCBC
T ss_pred HHHhcccCCCCCCHHHHHHHHHHHhccCcccchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCcc-ceeE
Confidence 999 9999874 67899999999985 68899999999999983 244 44443 77765 5899
Q ss_pred EeeEEEeccccCCccccccccceeeec--CceEEEecccc-------------CCHHH-----------HHHHHHHHHHc
Q 012481 143 VKGMKLEWGLKSPYFFTHKNKKECVLD--GALVLIYDTKI-------------SNSNV-----------IRQASLPCMMQ 196 (462)
Q Consensus 143 ~~G~~~~~g~~~~~~~~~~~~~~~~l~--~~~Il~~d~~i-------------~~~~~-----------i~~~le~i~~~ 196 (462)
++||+|+++|.||||++ +++ ||+|+++|.++ +++++ +.++++++.++
T Consensus 219 v~G~v~dk~~~~~~m~~-------~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~ 291 (559)
T 3p9d_A 219 VPGYALNCTVASQAMPK-------RIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDA 291 (559)
T ss_dssp CSEECCCCCCSSTTSCS-------EECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eccEEEeecccCCCcce-------eeccCCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999864 677 99999999876 34433 68899999999
Q ss_pred CCCEEEEecCcchhhHhhHHhhccCCCCcEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCCc-cCCCCCCceeeeE
Q 012481 197 GQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNS-TYFVPLKLGSCKR 275 (462)
Q Consensus 197 g~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~~-~~~~~~~LG~a~~ 275 (462)
|+||||++++|+++++++|..|+ |++|+++ ++.+|+|||++|||+++++..++.+ +++++++||+|++
T Consensus 292 g~~lvI~~~~I~~~al~~L~~~~------I~av~~~-----~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~ 360 (559)
T 3p9d_A 292 GAQVVLTTKGIDDLCLKEFVEAK------IMGVRRC-----KKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDE 360 (559)
T ss_dssp CCSEEEESSCCCGGGTHHHHHTT------CEEESSC-----CHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEE
T ss_pred CCCEEEEcCCCCHHHHHHHHHcC------CceEccC-----CHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceE
Confidence 99999999999999999999975 7899887 6778999999999999998666654 8999999999999
Q ss_pred EE---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHH
Q 012481 276 VI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAV 352 (462)
Q Consensus 276 v~---i~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~ 352 (462)
|+ ++++++++++||+++ +.|||+|||+|+++++|+||+++||||++
T Consensus 361 v~~~~ig~~~~~~~~g~~~~-------------------------------~~~tI~lrG~te~~l~E~kr~l~DAL~~~ 409 (559)
T 3p9d_A 361 VVQAKFSDDECILIKGTSKH-------------------------------SSSSIILRGANDYSLDEMERSLHDSLSVV 409 (559)
T ss_dssp EEEEECSSCEEECEEEESSS-------------------------------CCCCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCceEEEEEcCCCC-------------------------------CEEEEEEcCCCHHHHHHHHHHHHHHHHHH
Confidence 98 688999999998864 57999999999999999999999999999
Q ss_pred HHHHHcC-CcCChhHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCC---
Q 012481 353 QAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSS--- 423 (462)
Q Consensus 353 k~a~~~g-vVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~~--- 423 (462)
|+++++| +|||||++|++++++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++
T Consensus 410 r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~ 489 (559)
T 3p9d_A 410 KRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKP 489 (559)
T ss_dssp HHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC-
T ss_pred HHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccc
Confidence 9999999 9999999999999999999876 899999999999999999999999999999999 999863 333
Q ss_pred ---------CccccccC----CchhcCCccccccHHHHHHHHHHHHHHHhcC
Q 012481 424 ---------DLGYNPAR----DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 462 (462)
Q Consensus 424 ---------~~G~d~~~----dm~~~gI~dP~~v~~~al~~A~~~A~~lL~i 462 (462)
++|||+.+ ||++.|||||+.||+++|++|+|+|++||+|
T Consensus 490 ~~~~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 541 (559)
T 3p9d_A 490 EDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSALEACVAILRI 541 (559)
T ss_dssp ---CCCCCCCEEECTTSSSEEESTTSSCCEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred cccccccccceeEECCCCcEeehhhccCEecHHHHHHHHHHHHHHHHHHHhH
Confidence 68999987 9999999999999999999999999999986
No 12
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=1.1e-84 Score=696.15 Aligned_cols=396 Identities=19% Similarity=0.254 Sum_probs=366.2
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012481 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (462)
Q Consensus 5 ~~~~lk~~~~~~p~~~~~~~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~i~~G~~~a~~~~~~~ 83 (462)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||+++.++++ |+||+.|++||++|.+.++++
T Consensus 64 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 137 (545)
T 1a6d_A 64 GATILKEMDVEHPTAKMI------VEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKI 137 (545)
T ss_dssp HHHHHHHSCCCSHHHHHH------HGGGGCTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhccchHHHHH------HHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999966 7899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC-CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC---------cceeEe--cCCCccceeEEEee
Q 012481 84 LDCQARKIT-TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN---------DLITIF--DRKALYNELNFVKG 145 (462)
Q Consensus 84 L~~~~~~v~-~~~~l~~vA~ts~~------~~~~l~~li~~a~~~vg~~---------~~I~v~--~g~~~~d~~~~~~G 145 (462)
|+++++| + +.+.|.++|+||++ +++.|++++++|+.+++++ +.|+|+ +|++.. ++++++|
T Consensus 138 L~~~s~~-~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~-ds~lv~G 215 (545)
T 1a6d_A 138 IDEIAEK-STDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVN-DTQFISG 215 (545)
T ss_dssp HHHHCEE-CCCHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCST-TCEEESE
T ss_pred HHHhcCC-CCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCce-eeEEEee
Confidence 9999999 7 78999999998854 3678999999999999865 368887 787775 5799999
Q ss_pred EEEeccccCCccccccccceeeecCceEEEeccc-------------cCCHHHH-----------HHHHHHHHHcCCCEE
Q 012481 146 MKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSLL 201 (462)
Q Consensus 146 ~~~~~g~~~~~~~~~~~~~~~~l~~~~Il~~d~~-------------i~~~~~i-----------~~~le~i~~~g~~lv 201 (462)
++|+++|.||||++ +++||+|+++|.+ |++++++ .++++++.++|+|||
T Consensus 216 ~v~dk~~~~~~m~~-------~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lv 288 (545)
T 1a6d_A 216 IVIDKEKVHSKMPD-------VVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVV 288 (545)
T ss_dssp EEESCCCSCTTSCS-------EEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred EEEeccCCCCCCcc-------eecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 99999999999853 6899999999998 6667665 889999999999999
Q ss_pred EEecCcchhhHhhHHhhccCCCCcEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEe--
Q 012481 202 VVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT-- 279 (462)
Q Consensus 202 ii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~~~~~~~~~LG~a~~v~i~-- 279 (462)
|++++|+++++++|..|+ |+||++. ++++|+|||++|||+++++ ++++++++||+|++|++.
T Consensus 289 i~~~~I~~~al~~L~~~~------I~av~~~-----~k~~le~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~~i 352 (545)
T 1a6d_A 289 LCQKGIDDVAQHYLAKEG------IYAVRRV-----KKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEERKI 352 (545)
T ss_dssp EESSCBCHHHHHHHHHHT------CEEECSC-----CHHHHHHHHHHHCCCEESS-----GGGCCGGGCEEEEEEEEEEE
T ss_pred EECCCccHHHHHHHHHCC------eeEeccC-----CHHHHHHHHHHhCCeeecc-----cccCCHHHCCCceEEEEEEe
Confidence 999999999999999875 8899887 6788999999999999996 999999999999999864
Q ss_pred -cceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHc
Q 012481 280 -MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE 358 (462)
Q Consensus 280 -~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~a~~~ 358 (462)
++++++++||+++ +.|||+|||+|+++++|+||+++||+|++|+++++
T Consensus 353 g~~~~~~~~g~~~~-------------------------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~ 401 (545)
T 1a6d_A 353 GDDRMTFVMGCKNP-------------------------------KAVSILIRGGTDHVVSEVERALNDAIRVVAITKED 401 (545)
T ss_dssp TTEEEEEEEEESCS-------------------------------SCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCceEEEEecCCCC-------------------------------ceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 7899999998865 57999999999999999999999999999999999
Q ss_pred C-CcCChhHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCccccccC-
Q 012481 359 G-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPAR- 431 (462)
Q Consensus 359 g-vVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~- 431 (462)
| +|||||++|++++++|++++.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+
T Consensus 402 g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g 481 (545)
T 1a6d_A 402 GKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNN 481 (545)
T ss_dssp CEEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTT
T ss_pred CCEEeCcCHHHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccC
Confidence 9 9999999999999999999875 899999999999999999999999999999999 999863 44689999987
Q ss_pred ---CchhcCCccccccHHHHHHHHHHHHHHHhcC
Q 012481 432 ---DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 462 (462)
Q Consensus 432 ---dm~~~gI~dP~~v~~~al~~A~~~A~~lL~i 462 (462)
||++.|||||+.||+++|++|+++|++||+|
T Consensus 482 ~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 515 (545)
T 1a6d_A 482 GVGDMKAKGVVDPLRVKTHALESAVEVATMILRI 515 (545)
T ss_dssp EEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccccchhcCccccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999987
No 13
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=1.2e-84 Score=696.42 Aligned_cols=397 Identities=17% Similarity=0.262 Sum_probs=367.1
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012481 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (462)
Q Consensus 5 ~~~~lk~~~~~~p~~~~~~~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~i~~G~~~a~~~~~~~ 83 (462)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||++++++++ |+||+.|++||++|.+.++++
T Consensus 65 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 138 (548)
T 1q3q_A 65 CATILDKIDLQHPAAKMM------VEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEI 138 (548)
T ss_dssp HHHHHHHSCCCSHHHHHH------HHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccchHHHHH------HHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999966 7899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC--c-------ceeEe--cCCCccceeEEEe
Q 012481 84 LDCQARKIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN--D-------LITIF--DRKALYNELNFVK 144 (462)
Q Consensus 84 L~~~~~~v~--~~~~l~~vA~ts~~------~~~~l~~li~~a~~~vg~~--~-------~I~v~--~g~~~~d~~~~~~ 144 (462)
|+++++|++ +.+.|.++|+||++ +++.|++++++|+.+++++ | .|+|+ +|++.. ++++++
T Consensus 139 L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~-ds~lv~ 217 (548)
T 1q3q_A 139 LDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVE-ESELVR 217 (548)
T ss_dssp HHHHCEECCTTCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGG-GCEEES
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCcc-ceEEEe
Confidence 999999986 48899999998864 3578999999999999865 3 68887 787775 579999
Q ss_pred eEEEeccccCCccccccccceeeecCceEEEeccc-------------cCCHHHH-----------HHHHHHHHHcCCCE
Q 012481 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSL 200 (462)
Q Consensus 145 G~~~~~g~~~~~~~~~~~~~~~~l~~~~Il~~d~~-------------i~~~~~i-----------~~~le~i~~~g~~l 200 (462)
|++|+++|.||||++ +++||+|+++|.+ |++++++ .++++++.++|+||
T Consensus 218 G~v~dk~~~~~~m~~-------~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~l 290 (548)
T 1q3q_A 218 GVVIDKEVVHPRMPK-------RVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANV 290 (548)
T ss_dssp SEEESCCCSSTTSCS-------EESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCE
T ss_pred eEEEeccCCCCCCcc-------eecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCE
Confidence 999999999999853 6899999999998 7777775 88999999999999
Q ss_pred EEEecCcchhhHhhHHhhccCCCCcEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEe-
Q 012481 201 LVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT- 279 (462)
Q Consensus 201 vii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~~~~~~~~~LG~a~~v~i~- 279 (462)
||++++|+++++++|..|+ |+||++. ++++|+|||++|||+++++ ++++++++||+|++|++.
T Consensus 291 vi~~~~I~~~al~~L~~~~------I~av~~~-----~k~~le~ia~~tGa~ii~~-----l~~~~~~~LG~a~~v~~~~ 354 (548)
T 1q3q_A 291 VFVQKGIDDLAQHYLAKYG------IMAVRRV-----KKSDMEKLAKATGAKIVTN-----VKDLTPEDLGYAEVVEERK 354 (548)
T ss_dssp EEESSCBCHHHHHHHHHTT------CEEECSC-----CHHHHHHHHHHHCCCCBSS-----GGGCCGGGCEEESEEEEEE
T ss_pred EEEcCCcCHHHHHHHHHCC------cEEEccC-----CHHHHHHHHHHhCCeEecc-----cccCCHHHCCCceEEEEEE
Confidence 9999999999999999864 8899887 6788999999999999996 999999999999999865
Q ss_pred --cceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHH
Q 012481 280 --MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKE 357 (462)
Q Consensus 280 --~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~a~~ 357 (462)
++++++++||+++ +.|||+|||+|+++++|+||+++||+|++|++++
T Consensus 355 ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~ 403 (548)
T 1q3q_A 355 LAGENMIFVEGCKNP-------------------------------KAVTILIRGGTEHVIDEVERALEDAVKVVKDVME 403 (548)
T ss_dssp ETTEEEEEEECCSSC-------------------------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCceEEEEecCCCC-------------------------------CeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999865 5699999999999999999999999999999999
Q ss_pred cC-CcCChhHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCccccccC
Q 012481 358 EG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPAR 431 (462)
Q Consensus 358 ~g-vVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~ 431 (462)
+| +|||||++|++++++|++|+.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+
T Consensus 404 ~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~ 483 (548)
T 1q3q_A 404 DGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFE 483 (548)
T ss_dssp SCEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTT
T ss_pred CCCcccCCcHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCC
Confidence 99 9999999999999999999875 899999999999999999999999999999999 999863 34689999987
Q ss_pred ----CchhcCCccccccHHHHHHHHHHHHHHHhcC
Q 012481 432 ----DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 462 (462)
Q Consensus 432 ----dm~~~gI~dP~~v~~~al~~A~~~A~~lL~i 462 (462)
||++.|||||+.||+++|++|+++|++||+|
T Consensus 484 g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 518 (548)
T 1q3q_A 484 GKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRI 518 (548)
T ss_dssp TEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCccchhhcCCEecHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999997
No 14
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=2.7e-85 Score=698.58 Aligned_cols=401 Identities=15% Similarity=0.141 Sum_probs=363.3
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012481 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (462)
Q Consensus 5 ~~~~lk~~~~~~p~~~~~~~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~i~~G~~~a~~~~~~~ 83 (462)
..||||+|++.||+++++ +++|++||+++||||||+||||++||++|.++++ |+||+.|++||++|.+.++++
T Consensus 61 G~tIlk~i~v~hP~akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 134 (528)
T 3p9d_D 61 GHTILKQMAILHPVARML------VEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDI 134 (528)
T ss_dssp HHHHHHHSCCCCTTHHHH------HHHHHHHHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccCCHHHHHH------HHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHH
Confidence 468999999999999966 7899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhcc--CcceeEe-------cCCCccceeEEEeeE
Q 012481 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWE--NDLITIF-------DRKALYNELNFVKGM 146 (462)
Q Consensus 84 L~~~~~~v~--~~~~l~~vA~ts~~~------~~~l~~li~~a~~~vg~--~~~I~v~-------~g~~~~d~~~~~~G~ 146 (462)
|+++++|++ +.+.|.++|+||+++ ++.|++++++|+.++++ ++.|+++ .|++.. ++++++||
T Consensus 135 L~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~-ds~lv~G~ 213 (528)
T 3p9d_D 135 LLEMCHKVSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTID-DTEMIDGV 213 (528)
T ss_dssp HHTTCCCCCSCCHHHHHHHHHHHSCSSSCSTTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSC-CCEEESSC
T ss_pred HHHhhCCCCCCCHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCcc-ceEEEeee
Confidence 999999987 789999999999975 57899999999999986 4544443 277765 68999999
Q ss_pred EEeccccCCccccccccceeeecCceEEEeccccC-------------CHH-----------HHHHHHHHHHHcCCCEEE
Q 012481 147 KLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSN-----------VIRQASLPCMMQGQSLLV 202 (462)
Q Consensus 147 ~~~~g~~~~~~~~~~~~~~~~l~~~~Il~~d~~i~-------------~~~-----------~i~~~le~i~~~g~~lvi 202 (462)
+||++|.|||| |+..++||+|+++|.+++ +++ ++.++++++.+.|+||||
T Consensus 214 v~dk~~~~~~~------m~~~ien~kIll~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi 287 (528)
T 3p9d_D 214 VLTQTAIKSAG------GPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLL 287 (528)
T ss_dssp BCCCCCCCSSS------CCSEESSEEEEEECCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEeecccCccc------CcccccCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999995 234799999999999865 443 378999999999999999
Q ss_pred EecCc-----chhhHhhHHhhccCCCCcEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEE
Q 012481 203 VAEDV-----ENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI 277 (462)
Q Consensus 203 i~~~i-----~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~~~~~~~~~LG~a~~v~ 277 (462)
++++| ++.++++|..|+ |++||++ ++++|+|||++|||+++++ ++++++++||+|++|+
T Consensus 288 ~~~~I~~~a~~~~al~~L~~~~------I~av~~~-----~k~~le~ia~~tGa~ii~~-----~~~l~~~~LG~a~~v~ 351 (528)
T 3p9d_D 288 IQKSILRDAVNDLALHFLSKLN------IMVVKDI-----EREEIEFLSKGLGCKPIAD-----IELFTEDRLDSADLVE 351 (528)
T ss_dssp ESSCSCTTSCSCHHHHHHTTTS------CCEEECC-----CTHHHHHHHHHHTCCCCSC-----STTCCSSSEEEESCEE
T ss_pred EeCCcccccCCHHHHHHHHHcC------cEEEEeC-----CHHHHHHHHHHHCCEEecc-----cccCCHHHCCcccEEE
Confidence 99999 999999998754 8899988 5777999999999999997 7999999999999997
Q ss_pred E---ecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHH
Q 012481 278 A---TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQA 354 (462)
Q Consensus 278 i---~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~ 354 (462)
+ ++++++++++|+... .|+.|||+|||+|+++++|+||+++||+|++|+
T Consensus 352 ~~~ig~~~~~~i~g~~~~~----------------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~ 403 (528)
T 3p9d_D 352 EIDSDGSKIVRVTGIRNNN----------------------------ARPTVSVVIRGANNMIIDETERSLHDALCVIRC 403 (528)
T ss_dssp CCEETTEECCBCTTBCCGG----------------------------GCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHH
T ss_pred EEEECCEEEEEEEcccccC----------------------------CCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4 567789998876321 146899999999999999999999999999999
Q ss_pred HHHcC-CcCChhHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCcccc
Q 012481 355 AKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYN 428 (462)
Q Consensus 355 a~~~g-vVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~~~~G~d 428 (462)
++++| +|||||++|++++++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||
T Consensus 404 av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d 483 (528)
T 3p9d_D 404 LVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGIS 483 (528)
T ss_dssp HHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCC
T ss_pred HHhcCCccCCCCHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCcccee
Confidence 99999 9999999999999999999876 899999999999999999999999999999999 999874 35789999
Q ss_pred ccC----CchhcCCccccccHHHHHHHHHHHHHHHhcC
Q 012481 429 PAR----DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 462 (462)
Q Consensus 429 ~~~----dm~~~gI~dP~~v~~~al~~A~~~A~~lL~i 462 (462)
+.+ ||++.|||||+.||+++|++|+|+|++||+|
T Consensus 484 ~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 521 (528)
T 3p9d_D 484 VRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRI 521 (528)
T ss_dssp SSSSSCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCccchHhccCeecHHHHHHHHHHHHHHHHHHHhh
Confidence 987 9999999999999999999999999999987
No 15
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.7e-84 Score=687.25 Aligned_cols=404 Identities=17% Similarity=0.185 Sum_probs=357.6
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012481 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (462)
Q Consensus 5 ~~~~lk~~~~~~p~~~~~~~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~i~~G~~~a~~~~~~~ 83 (462)
..||||+|++.||+|+++ +++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|.+.++++
T Consensus 52 G~tIlk~i~~~hP~Akll------~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 125 (515)
T 3iyg_E 52 GATILSMMDVDHQIAKLM------VELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEH 125 (515)
T ss_pred HHHHHHHcccCCHHHHHH------HHHHHHhhhhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999966 7899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC----CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC-------cceeEe--cCCCccceeEEEe
Q 012481 84 LDCQARKIT----TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-------DLITIF--DRKALYNELNFVK 144 (462)
Q Consensus 84 L~~~~~~v~----~~~~l~~vA~ts~~~------~~~l~~li~~a~~~vg~~-------~~I~v~--~g~~~~d~~~~~~ 144 (462)
|+++++|++ +.+.|.++|+||+++ .+.|++++++|+..+... +.|+|+ .|++.. ++++++
T Consensus 126 L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~-ds~lv~ 204 (515)
T 3iyg_E 126 LDKISDSVLVDMKNTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLE-DTKLIK 204 (515)
T ss_pred HHHhceecCCCccCHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcc-cceEEe
Confidence 999998875 368899999999985 357888999999888641 235664 476665 689999
Q ss_pred eEEEeccccCCcccccccc-ceeeecCceEEE-----eccccCCHHHH-----------HHHHHHHHHcCCCEEEEecCc
Q 012481 145 GMKLEWGLKSPYFFTHKNK-KECVLDGALVLI-----YDTKISNSNVI-----------RQASLPCMMQGQSLLVVAEDV 207 (462)
Q Consensus 145 G~~~~~g~~~~~~~~~~~~-~~~~l~~~~Il~-----~d~~i~~~~~i-----------~~~le~i~~~g~~lvii~~~i 207 (462)
||+||++|.||||+++.++ +...+++|+.+. ++.+|++++++ .++++++.++|+||||++++|
T Consensus 205 G~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I 284 (515)
T 3iyg_E 205 GVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGF 284 (515)
T ss_pred eEEEecccccccccccCCCceEEEEcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 9999999999999875443 222344444433 23346777665 678999999999999999999
Q ss_pred chhhHhhHHhhccCCCCcEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEE-----ecce
Q 012481 208 ENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA-----TMDN 282 (462)
Q Consensus 208 ~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~~~~~~~~~LG~a~~v~i-----~~~~ 282 (462)
+++++++|..|+ +++++++ ++.+|+|||++|||+++++ ++++++++||+|++|++ ++++
T Consensus 285 ~~~al~~L~~~~------I~~v~~v-----~k~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~ig~~k~~ 348 (515)
T 3iyg_E 285 DDEANHLLLQND------LPAVRWV-----GGPEIELIAIATGGRIVPR-----FSELTAEKLGFAGLVKEISFGTTKDK 348 (515)
T ss_pred CHHHHHHHHHCC------CEEEecc-----CHHHHHHHHHHhCCEEecc-----cccCCHHHCCcceEEEEEEeccccce
Confidence 999999999875 6789988 3667999999999999996 89999999999999986 4588
Q ss_pred EEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHcC-Cc
Q 012481 283 VVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IV 361 (462)
Q Consensus 283 ~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~a~~~g-vV 361 (462)
+++++||+++. .+||+|||+|+++++|+||+++||||++|+++++| +|
T Consensus 349 ~~~~~g~~~~~-------------------------------~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iV 397 (515)
T 3iyg_E 349 MLVIEQCKNSR-------------------------------AVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVV 397 (515)
T ss_pred EEEEEcCCCCc-------------------------------eEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 99999998763 58999999999999999999999999999999999 99
Q ss_pred CChhHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCccccccC----
Q 012481 362 PGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYNPAR---- 431 (462)
Q Consensus 362 pGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~----~~~~~G~d~~~---- 431 (462)
||||++|++++++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+
T Consensus 398 pGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~ 477 (515)
T 3iyg_E 398 YGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTN 477 (515)
T ss_pred CCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCccc
Confidence 99999999999999999876 899999999999999999999999999999999 999863 34679999987
Q ss_pred CchhcCCccccccHHHHHHHHHHHHHHHhcC
Q 012481 432 DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 462 (462)
Q Consensus 432 dm~~~gI~dP~~v~~~al~~A~~~A~~lL~i 462 (462)
||++.|||||+.||+++|++|+++|++||+|
T Consensus 478 d~~~~gI~dp~~vk~~al~~A~~~a~~iL~i 508 (515)
T 3iyg_E 478 DMKHQHVIETLIGKKQQISLATQMVRMILKI 508 (515)
T ss_pred chHhccCEEcHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999986
No 16
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.4e-84 Score=690.66 Aligned_cols=402 Identities=15% Similarity=0.170 Sum_probs=361.9
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012481 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (462)
Q Consensus 5 ~~~~lk~~~~~~p~~~~~~~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~i~~G~~~a~~~~~~~ 83 (462)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||++|.++++ |+||+.|++||++|.+.++++
T Consensus 52 G~tIlk~i~v~hP~akll------~~~a~~qd~e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 125 (529)
T 3iyg_A 52 GATILKLLEVEHPAAKVL------CELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRY 125 (529)
T ss_pred HHHHHHHcccCChHHHHH------HHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999976 7899999999999999999999999999999999 999999999999999999999
Q ss_pred Hhc-cccccC--CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhc---cCc-----c--eeEe--cCCCccceeEE
Q 012481 84 LDC-QARKIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGW---END-----L--ITIF--DRKALYNELNF 142 (462)
Q Consensus 84 L~~-~~~~v~--~~~~l~~vA~ts~~------~~~~l~~li~~a~~~vg---~~~-----~--I~v~--~g~~~~d~~~~ 142 (462)
|++ +++|++ +++.|.++|+||++ +++.|++++++|+.+++ .+| . |+|+ .|++. +++++
T Consensus 126 L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~-~ds~l 204 (529)
T 3iyg_A 126 ISENLIINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQ-MESML 204 (529)
T ss_pred HHHhcccCCCCCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCc-cceEE
Confidence 999 999987 68899999999875 36889999999999997 333 2 6664 56655 46899
Q ss_pred EeeEEEeccccCCccccccccceeeecCceEEEecccc-------------CCHHH-----------HHHHHHHHHHcCC
Q 012481 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKI-------------SNSNV-----------IRQASLPCMMQGQ 198 (462)
Q Consensus 143 ~~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Il~~d~~i-------------~~~~~-----------i~~~le~i~~~g~ 198 (462)
++|++|+++|.||+|++ .++||+|+++|.++ +++++ +.++++++.+.|+
T Consensus 205 v~G~v~dk~~~~~~m~~-------~ien~kIlll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~ 277 (529)
T 3iyg_A 205 INGYALNCVVGSQGMPK-------RIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGA 277 (529)
T ss_pred EeeeEEecCcccccCCc-------ccCCceEEEecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999865 68899999999864 33322 6678899999999
Q ss_pred CEEEEecCcchhhHhhHHhhccCCCCcEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCC-ccCCCCCCceeeeEEE
Q 012481 199 SLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMN-STYFVPLKLGSCKRVI 277 (462)
Q Consensus 199 ~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~-~~~~~~~~LG~a~~v~ 277 (462)
||||++++|+++++++|..|+ |++||+. ++++|+|||++|||+++++..++. .+++++++||+|++|+
T Consensus 278 nvvi~~~~I~d~al~~L~~~g------I~av~~v-----~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~ 346 (529)
T 3iyg_A 278 NVILTTGGIDDMCLKYFVEAG------AMAVRRV-----LKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVV 346 (529)
T ss_pred CEEEECCCCCHHHHHHHHHcC------CceeccC-----CHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEE
Confidence 999999999999999999874 8899987 677899999999999999854443 3456788999999997
Q ss_pred ---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHH
Q 012481 278 ---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQA 354 (462)
Q Consensus 278 ---i~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~ 354 (462)
++++++++++||+++ +.|||+|||+|+++++|.||+++||+|++|+
T Consensus 347 ~~~ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~ 395 (529)
T 3iyg_A 347 QERICDDELILIKNTKAR-------------------------------TSASVILRGANDFMCDEMERSLHDALCVVKR 395 (529)
T ss_pred EEEeCCceEEEEEcCCCC-------------------------------ceEEEEECCchHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999876 4699999999999999999999999999999
Q ss_pred HHHcC-CcCChhHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CC------
Q 012481 355 AKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DS------ 422 (462)
Q Consensus 355 a~~~g-vVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~------ 422 (462)
++++| +|||||++|+++|++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++
T Consensus 396 ~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~ 475 (529)
T 3iyg_A 396 VLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERK 475 (529)
T ss_pred HhhCCeEEeCCcHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccc
Confidence 99999 9999999999999999999876 899999999999999999999999999999999 999863 22
Q ss_pred --CCccccccC----CchhcCCccccccHHHHHHHHHHHHHHHhcC
Q 012481 423 --SDLGYNPAR----DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 462 (462)
Q Consensus 423 --~~~G~d~~~----dm~~~gI~dP~~v~~~al~~A~~~A~~lL~i 462 (462)
+++|||+.+ ||++.|||||+.||+++|++|+++|++||||
T Consensus 476 ~~~~~G~d~~~g~~~d~~~~gV~dp~~vk~~al~~A~e~a~~iL~i 521 (529)
T 3iyg_A 476 NLKWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRI 521 (529)
T ss_pred cCceeeeeCCCCCccChhhccCEecHHHHHHHHHHHHHHHHHHHhH
Confidence 578999987 9999999999999999999999999999987
No 17
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=1.8e-84 Score=694.67 Aligned_cols=397 Identities=19% Similarity=0.253 Sum_probs=365.8
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012481 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (462)
Q Consensus 5 ~~~~lk~~~~~~p~~~~~~~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~i~~G~~~a~~~~~~~ 83 (462)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||++|+++++ |+||+.|++||++|.+.++++
T Consensus 63 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 136 (543)
T 1a6d_B 63 GVTILKEMDVEHPAAKMM------VEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRV 136 (543)
T ss_dssp HHHHHHHSCCCSHHHHHH------HHHHTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccchHHHHH------HHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999966 7899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCC--HHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC--cc-------eeEe--cCCCccceeEEEe
Q 012481 84 LDCQARKITT--FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN--DL-------ITIF--DRKALYNELNFVK 144 (462)
Q Consensus 84 L~~~~~~v~~--~~~l~~vA~ts~~------~~~~l~~li~~a~~~vg~~--~~-------I~v~--~g~~~~d~~~~~~ 144 (462)
|+++++|++. .+.|.++|+||++ +++.|++++++|+.+++++ |. |+|+ +|++.. ++++++
T Consensus 137 L~~~a~~v~~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~-ds~lv~ 215 (543)
T 1a6d_B 137 IDEISTKIGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAID-DTQLIN 215 (543)
T ss_dssp HHHHCEECCTTHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGG-GCEEES
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCcc-ceeEEc
Confidence 9999999873 7899999998754 3578999999999999875 52 7776 787775 579999
Q ss_pred eEEEeccccCCccccccccceeeecCceEEEeccc-------------cCCHHHH-----------HHHHHHHHHcCCCE
Q 012481 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSL 200 (462)
Q Consensus 145 G~~~~~g~~~~~~~~~~~~~~~~l~~~~Il~~d~~-------------i~~~~~i-----------~~~le~i~~~g~~l 200 (462)
||+|+++|.||||+. .++||+|+++|.+ |++++++ .++++++.++|+||
T Consensus 216 G~v~dk~~~~~~m~~-------~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~l 288 (543)
T 1a6d_B 216 GIIVDKEKVHPGMPD-------VVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANV 288 (543)
T ss_dssp EEEESCCCSSTTSCS-------EEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred cEEEecCCCCCCCcc-------eecCCeEEEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 999999999999853 6899999999998 6777665 89999999999999
Q ss_pred EEEecCcchhhHhhHHhhccCCCCcEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEe-
Q 012481 201 LVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT- 279 (462)
Q Consensus 201 vii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~~~~~~~~~LG~a~~v~i~- 279 (462)
||++++|+++++++|..|+ |++|++. ++++|+|||++|||+++++ ++++++++||+|++|++.
T Consensus 289 vi~~~~I~~~al~~L~~~~------I~av~~v-----~k~~le~ia~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ 352 (543)
T 1a6d_B 289 VITQKGIDDMAQHYLSRAG------IYAVRRV-----KKSDMDKLAKATGASIVST-----IDEISSSDLGTAERVEQVK 352 (543)
T ss_dssp EEESSCBCHHHHHHHHHTT------CEEECSC-----CHHHHHHHHHHHTCCEESC-----GGGCCGGGCEEEEEEEEEE
T ss_pred EEECCCcCHHHHHHHHHCC------eeEeccC-----CHHHHHHHHHHhCCceecc-----cccCCHHHCCCceEEEEEE
Confidence 9999999999999999864 8999987 6778999999999999986 999999999999999864
Q ss_pred --cceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHH
Q 012481 280 --MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKE 357 (462)
Q Consensus 280 --~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~a~~ 357 (462)
++++++++||+++ +.|||+|||+|+++++|+||+++||+|++|++++
T Consensus 353 ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~ 401 (543)
T 1a6d_B 353 VGEDYMTFVTGCKNP-------------------------------KAVSILVRGETEHVVDEMERSITDSLHVVASALE 401 (543)
T ss_dssp ETTEEEEEEEEESSS-------------------------------SCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCceEEEEecCCCC-------------------------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999998865 5699999999999999999999999999999999
Q ss_pred cC-CcCChhHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCccccccC
Q 012481 358 EG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPAR 431 (462)
Q Consensus 358 ~g-vVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~ 431 (462)
+| +|||||++|++++++|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+
T Consensus 402 ~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~ 481 (543)
T 1a6d_B 402 DGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFT 481 (543)
T ss_dssp HCEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTT
T ss_pred CCCccCCccHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCC
Confidence 99 9999999999999999999864 889999999999999999999999999999999 999863 44689999987
Q ss_pred ----CchhcCCccccccHHHHHHHHHHHHHHHhcC
Q 012481 432 ----DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 462 (462)
Q Consensus 432 ----dm~~~gI~dP~~v~~~al~~A~~~A~~lL~i 462 (462)
||++.|||||+.||+++|++|+++|++||+|
T Consensus 482 g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 516 (543)
T 1a6d_B 482 GEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRI 516 (543)
T ss_dssp TEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHE
T ss_pred CcccchhhcCceecHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999986
No 18
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.8e-84 Score=687.90 Aligned_cols=397 Identities=16% Similarity=0.186 Sum_probs=355.7
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012481 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (462)
Q Consensus 5 ~~~~lk~~~~~~p~~~~~~~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~i~~G~~~a~~~~~~~ 83 (462)
..||||+|++.||+||++ +++|++||+++||||||+||||++||++|.++++ |+||+.|++||++|.+.++++
T Consensus 53 G~tIlk~i~v~hP~akll------~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 126 (518)
T 3iyg_D 53 GATILKQMQVLHPAARML------VELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEI 126 (518)
T ss_pred HHHHHHHcccchHHHHHH------HHHHHHhhhhhCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999966 7899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCCC------hhHHHHHHHHHHhhcc---Ccc-----eeEe--cCCCccceeEEEee
Q 012481 84 LDCQARKIT--TFEEIAQVGTTAANGD------GEIGELIAKVFEKGWE---NDL-----ITIF--DRKALYNELNFVKG 145 (462)
Q Consensus 84 L~~~~~~v~--~~~~l~~vA~ts~~~~------~~l~~li~~a~~~vg~---~~~-----I~v~--~g~~~~d~~~~~~G 145 (462)
|+++++|++ +.+.|.++|+||++++ +.|++++++|+.+++. +|. |+|+ .|++. +++++++|
T Consensus 127 L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~-~ds~lv~G 205 (518)
T 3iyg_D 127 LTDMSRPVELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTI-DDCELVEG 205 (518)
T ss_pred HHHheeeCCCCChHHHHHHhHhhhccccchhhHHHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCCh-hhheEecc
Confidence 999999987 7889999999999864 7899999999999985 454 6665 35554 57899999
Q ss_pred EEEeccccCCccccccccceeeecCceEEEeccc-------------cCCHH-----------HHHHHHHHHHHcCCCEE
Q 012481 146 MKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSN-----------VIRQASLPCMMQGQSLL 201 (462)
Q Consensus 146 ~~~~~g~~~~~~~~~~~~~~~~l~~~~Il~~d~~-------------i~~~~-----------~i~~~le~i~~~g~~lv 201 (462)
|+||++|.| .|+. .++||+|++++.+ |++++ ++.++++++.+.|+|||
T Consensus 206 ~~~dk~~~~-~mp~-------~i~n~kIlll~~~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lv 277 (518)
T 3iyg_D 206 LVLTQKVAN-SGIT-------RVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVL 277 (518)
T ss_pred EEEeccccc-CCCc-------cccCceEEEEEeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 999999998 3321 3566666666554 44554 46788999999999999
Q ss_pred EE-----ecCcchhhHhhHHhhccCCCCcEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEE
Q 012481 202 VV-----AEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRV 276 (462)
Q Consensus 202 ii-----~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~~~~~~~~~LG~a~~v 276 (462)
|+ +++|+++++++|..| +|+|||+|+ +.+|+|||++|||+++++ ++++++++||+|++|
T Consensus 278 i~~k~i~~~~I~~~Al~~L~~~------~I~av~~~~-----~~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v 341 (518)
T 3iyg_D 278 LIQKSILRDALSDLALHFLNKM------KIMVVKDIE-----REDIEFICKTIGTKPVAH-----VDQFTADMLGSAELA 341 (518)
T ss_pred EEeccccccCcCHHHHHHHHHc------CcEEEecCC-----HHHHHHHHHHhCCEEecc-----cccCCHHHCCcCcEE
Confidence 99 799999999999986 489999995 445999999999999997 899999999999999
Q ss_pred EE---ec-ceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHH
Q 012481 277 IA---TM-DNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAV 352 (462)
Q Consensus 277 ~i---~~-~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~ 352 (462)
++ ++ +++++|++|++. |+.|||+|||+|+++++|+||+++||+|++
T Consensus 342 ~~~~~g~~~~~~~~~g~~~~------------------------------~~~~tI~lrG~te~~l~E~kr~l~DAl~~~ 391 (518)
T 3iyg_D 342 EEVSLNGSGKLIKITGCASP------------------------------GKTVTIVVRGSNKLVIEEAERSIHDALCVI 391 (518)
T ss_pred EEEEeCCCceEEEEECCCCC------------------------------CceEEEEECCCCHHHHHHHHHHHHHHHHHH
Confidence 75 34 578999998751 367999999999999999999999999999
Q ss_pred HHHHHcC-CcCChhHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCcc
Q 012481 353 QAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLG 426 (462)
Q Consensus 353 k~a~~~g-vVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~~~~G 426 (462)
|+++++| +|||||++|++++++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|
T Consensus 392 r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G 471 (518)
T 3iyg_D 392 RCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTG 471 (518)
T ss_pred HHHHhCCCEeecCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCcee
Confidence 9999998 9999999999999999999875 899999999999999999999999999999999 999873 456799
Q ss_pred ccccC----CchhcCCccccccHHHHHHHHHHHHHHHhcC
Q 012481 427 YNPAR----DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 462 (462)
Q Consensus 427 ~d~~~----dm~~~gI~dP~~v~~~al~~A~~~A~~lL~i 462 (462)
||+.+ ||++.|||||+.||+++|++|+++|++||+|
T Consensus 472 ~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 511 (518)
T 3iyg_D 472 INVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKI 511 (518)
T ss_pred EeCCCCcccchhhccCEEcHHHHHHHHHHHHHHHHHHHhh
Confidence 99987 9999999999999999999999999999987
No 19
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=6.9e-83 Score=678.51 Aligned_cols=403 Identities=15% Similarity=0.194 Sum_probs=355.1
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012481 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (462)
Q Consensus 5 ~~~~lk~~~~~~p~~~~~~~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~i~~G~~~a~~~~~~~ 83 (462)
..||||+|++.||+||++ +++|++||+++||||||+||||++||++|.++++ |+||+.|++||++|.+.++++
T Consensus 53 G~tIlk~i~v~hP~Akll------~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~ 126 (512)
T 3iyg_Q 53 AATILRELEVQHPAAKMI------VMASHMQEQEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEI 126 (512)
T ss_pred HHHHHHHcccCCHHHHHH------HHHHHHhhhhhCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999966 7899999999999999999999999999999999 999999999999999999999
Q ss_pred Hhcc----ccccCCHHHHHHHHHHhcCC-----ChhHHHHHHHHHHhhccC-cceeEe-------cCCCccceeEEEeeE
Q 012481 84 LDCQ----ARKITTFEEIAQVGTTAANG-----DGEIGELIAKVFEKGWEN-DLITIF-------DRKALYNELNFVKGM 146 (462)
Q Consensus 84 L~~~----~~~v~~~~~l~~vA~ts~~~-----~~~l~~li~~a~~~vg~~-~~I~v~-------~g~~~~d~~~~~~G~ 146 (462)
|+++ +.++++.+.|.++|+||+++ ++.|++++++|+.+++++ +.|+++ .|++. +++++++||
T Consensus 127 L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~-~ds~lv~G~ 205 (512)
T 3iyg_Q 127 LPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGNEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGV-HSSSVLHGM 205 (512)
T ss_pred HHHhhcccCCCCCCHHHHHHHHHHHhCCCCccchHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCc-ccceEEeeE
Confidence 9998 56677889999999999986 688999999999999876 444443 36666 679999999
Q ss_pred EEeccccCCcccccccccee-eecCce-EEEeccc----cCCHHHHHHH-------HH----HHHHcCCCEEEEecCcch
Q 012481 147 KLEWGLKSPYFFTHKNKKEC-VLDGAL-VLIYDTK----ISNSNVIRQA-------SL----PCMMQGQSLLVVAEDVEN 209 (462)
Q Consensus 147 ~~~~g~~~~~~~~~~~~~~~-~l~~~~-Il~~d~~----i~~~~~i~~~-------le----~i~~~g~~lvii~~~i~~ 209 (462)
+||++|.+ |+++.++.++ .+.+|+ +..++.+ |++++++.++ ++ ++.++|+||||++++|++
T Consensus 206 ~~dk~~~~--~~~~~~n~kI~ll~~~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~ 283 (512)
T 3iyg_Q 206 VFKKETEG--DVTSVKDAKIAVYSCPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVAD 283 (512)
T ss_pred EEecCcCC--CCcccccCceEEEecccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccH
Confidence 99999976 6664332222 334444 4444444 7788887776 55 788999999999999999
Q ss_pred hhHhhHHhhccCCCCcEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEe---cceEEEE
Q 012481 210 EVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVII 286 (462)
Q Consensus 210 ~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~~~~~~~~~LG~a~~v~i~---~~~~~~~ 286 (462)
.++++|.. .+|++||+|+ +.+|+|||++|||+++++ ++++++++||+|++|++. +++++++
T Consensus 284 la~~~l~k------~~I~av~~~~-----~~dle~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~~~g~~~~~~~ 347 (512)
T 3iyg_Q 284 MALHYANK------YNIMLVRLNS-----KWDLRRLCKTVGATALPR-----LNPPVLEEMGHCDSVYLSEVGDTQVVVF 347 (512)
T ss_pred HHHHHHHH------CCeEEEEeCC-----HHHHHHHHHHhCCEEecc-----cccCCHHHCCcccEEEEEEeCCeEEEEE
Confidence 99997775 4599999996 445999999999999996 899999999999999764 5678999
Q ss_pred cCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHcC-CcCChh
Q 012481 287 GGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSG 365 (462)
Q Consensus 287 ~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~a~~~g-vVpGGG 365 (462)
++|+. +|+.|||+|||+|+++++|+||+++||||++|+++++| +|||||
T Consensus 348 ~~~~~------------------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGG 397 (512)
T 3iyg_Q 348 KHEKE------------------------------DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGG 397 (512)
T ss_pred EcccC------------------------------CCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCc
Confidence 98753 24789999999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCcccccc--C----Cch
Q 012481 366 VALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPA--R----DMF 434 (462)
Q Consensus 366 a~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~--~----dm~ 434 (462)
++|+++|++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+. + ||+
T Consensus 398 a~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~ 477 (512)
T 3iyg_Q 398 ATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDML 477 (512)
T ss_pred HHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcccchH
Confidence 9999999999999875 899999999999999999999999999999999 999863 5678999998 2 999
Q ss_pred hcCCccccccHHHHHHHHHHHHHHHhcC
Q 012481 435 KCGDVDPLKHVPSEFAKATSMISLKNAI 462 (462)
Q Consensus 435 ~~gI~dP~~v~~~al~~A~~~A~~lL~i 462 (462)
+.|||||+.||+++|++|+++|++||+|
T Consensus 478 ~~gI~dp~~vk~~al~~A~~~a~~iL~i 505 (512)
T 3iyg_Q 478 EAGVLDTYLGKYWAIKLATNAAVTVLRV 505 (512)
T ss_pred hccCeEcHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999986
No 20
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.2e-82 Score=676.67 Aligned_cols=397 Identities=12% Similarity=0.150 Sum_probs=356.7
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012481 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (462)
Q Consensus 5 ~~~~lk~~~~~~p~~~~~~~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~i~~G~~~a~~~~~~~ 83 (462)
..||||+|++.||+||++ +++|++||+++||||||+||||++||++|.++++ |+||+.|++||++|.+.++++
T Consensus 51 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 124 (515)
T 3iyg_G 51 GNAILREIQVQHPAAKSM------IEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMIST 124 (515)
T ss_pred HHHHHHhcccCCHHHHHH------HHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC--c--------ceeEe--cCCCccceeEEE
Q 012481 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN--D--------LITIF--DRKALYNELNFV 143 (462)
Q Consensus 84 L~~~~~~v~--~~~~l~~vA~ts~~~------~~~l~~li~~a~~~vg~~--~--------~I~v~--~g~~~~d~~~~~ 143 (462)
|+++++|++ +.+.|.++|+||+++ .+.+++++++|+..+..+ + .|.|+ +|++. ++++++
T Consensus 125 L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~-~ds~lv 203 (515)
T 3iyg_G 125 LKKISIPVDTSNRDTMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGII-EDSCVL 203 (515)
T ss_pred HHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCc-ccceEE
Confidence 999999986 478999999999874 235678999999888622 2 14554 57666 478999
Q ss_pred eeEEEeccccCCccccccccceeeecCceEEEecc-------------ccCCHHHHHHHHH-----------HHHHcCCC
Q 012481 144 KGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDT-------------KISNSNVIRQASL-----------PCMMQGQS 199 (462)
Q Consensus 144 ~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Il~~d~-------------~i~~~~~i~~~le-----------~i~~~g~~ 199 (462)
+||+||++|.||.|+ .+++||+|+++|. +|++++++.++++ ++.+.|.+
T Consensus 204 ~G~v~dk~~~~~~m~-------~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~ 276 (515)
T 3iyg_G 204 RGVMINKDVTHPRMR-------RYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPD 276 (515)
T ss_pred eeEEEeCCCCCCCCc-------ceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999774 3799999999998 5778888888887 88888888
Q ss_pred EEEEecCcchhhHhhHHhhccCCCCcEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCCccCCCCCCcee-eeEEEE
Q 012481 200 LLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS-CKRVIA 278 (462)
Q Consensus 200 lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~~~~~~~~~LG~-a~~v~i 278 (462)
|+|++++|++.++++|..+ +|+++++. ++++|+|||++|||+++++ ++++++++||+ |+.|++
T Consensus 277 vIi~~~~I~~~al~~L~~~------~I~av~~~-----~k~~leria~~tGa~ii~~-----l~~l~~~~LG~~a~~v~~ 340 (515)
T 3iyg_G 277 VVITEKGISDLAQHYLMRA------NITAIRRV-----RKTDNNRIARACGARIVSR-----PEELREEDVGTGAGLLEI 340 (515)
T ss_pred EEEECCccCHHHHHHHHHC------CceeeccC-----CHHHHHHHHHHhCCeeecc-----ccccChhhcCCcccEEEE
Confidence 8898999999999998863 48899877 6778999999999999997 89999999999 999975
Q ss_pred ---ecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHH
Q 012481 279 ---TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAA 355 (462)
Q Consensus 279 ---~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~a 355 (462)
++++++|++||+++ ..|||+|||+|+++++|+||+++||||++|++
T Consensus 341 ~~~g~~~~~~i~g~~~~-------------------------------~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~ 389 (515)
T 3iyg_G 341 KKIGDEYFTFITECKDP-------------------------------KACTILLRGASKEILSEVERNLQDAMQVCRNV 389 (515)
T ss_pred EEECCceEEEEeCCCCC-------------------------------CeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45689999999876 35899999999999999999999999999999
Q ss_pred HHc-CCcCChhHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCcccc
Q 012481 356 KEE-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYN 428 (462)
Q Consensus 356 ~~~-gvVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~----~~~~~G~d 428 (462)
+++ ++|||||++|+++|++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||
T Consensus 390 ~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d 469 (515)
T 3iyg_G 390 LLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVN 469 (515)
T ss_pred hhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeee
Confidence 976 59999999999999999999875 899999999999999999999999999999999 999863 24578999
Q ss_pred ccC----CchhcCCccccccHHHHHHHHHHHHHHHhcC
Q 012481 429 PAR----DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 462 (462)
Q Consensus 429 ~~~----dm~~~gI~dP~~v~~~al~~A~~~A~~lL~i 462 (462)
+.+ ||++.|||||+.||+++|++|+++|++||+|
T Consensus 470 ~~~g~~~d~~~~gi~dp~~vk~~al~~A~e~a~~iL~i 507 (515)
T 3iyg_G 470 GETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRI 507 (515)
T ss_pred CCCCcccccHHcCCEEcHHHHHHHHHHHHHHHHHHHHH
Confidence 987 9999999999999999999999999999986
No 21
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=2.6e-84 Score=693.57 Aligned_cols=399 Identities=16% Similarity=0.161 Sum_probs=358.7
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012481 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (462)
Q Consensus 5 ~~~~lk~~~~~~p~~~~~~~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~i~~G~~~a~~~~~~~ 83 (462)
..||||+|+++||+|+++ +++|++||+++||||||+||||++||++|.++++ |+||+.|++||++|.+.++++
T Consensus 66 G~TIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~ 139 (550)
T 3p9d_G 66 GATILKLLDVVHPAAKTL------VDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEK 139 (550)
T ss_dssp HHHHTTTSCCCSHHHHHH------HHHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCCHHHHHH------HHHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999966 7899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--C---HHHHHHHHHHhcC------CChhHHHHHHHHHHhhcc-C------cceeEecCCCccceeEEEee
Q 012481 84 LDCQARKIT--T---FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWE-N------DLITIFDRKALYNELNFVKG 145 (462)
Q Consensus 84 L~~~~~~v~--~---~~~l~~vA~ts~~------~~~~l~~li~~a~~~vg~-~------~~I~v~~g~~~~d~~~~~~G 145 (462)
|+++++|++ + .+.|.++|+||++ +++.|++++++|+.++++ + +.+++. |++..| +++++|
T Consensus 140 L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv~-Gg~~~d-s~lv~G 217 (550)
T 3p9d_G 140 INELAVDITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKIP-GGAMEE-SLFING 217 (550)
T ss_dssp HHHSEECCCCC------CHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBCC-SSCGGG-CCCCSS
T ss_pred HHHhcccCCCCcchhHHHHHHHHHHhccCccccccHhHHHHHHHHHHHHhCccccCchheeEEEec-CCCccc-eeEEee
Confidence 999999986 3 6789999999864 367899999999999984 3 444544 777765 599999
Q ss_pred EEEeccccCCccccccccceeeecCceEEEeccc-------------cCCHHHHHH-----------HHHHHHHcCCCEE
Q 012481 146 MKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVIRQ-----------ASLPCMMQGQSLL 201 (462)
Q Consensus 146 ~~~~~g~~~~~~~~~~~~~~~~l~~~~Il~~d~~-------------i~~~~~i~~-----------~le~i~~~g~~lv 201 (462)
|+||++|.||||.+.|+ .++||+|+++|.+ |++++++.+ +++++.++|++||
T Consensus 218 ~~~dk~~~s~yf~~~~~----~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vV 293 (550)
T 3p9d_G 218 VAFKKTFSYAGFEQQPK----KFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIV 293 (550)
T ss_dssp EEECCCSSCTTCSCSCS----CCSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEE
T ss_pred EEEeccccccccccCcc----cccCceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999987665 4999999999997 456655544 6778999999999
Q ss_pred EEecCcchhhHhhHHhhccCCCCcEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEE---
Q 012481 202 VVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA--- 278 (462)
Q Consensus 202 ii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~~~~~~~~~LG~a~~v~i--- 278 (462)
+++++|++.++++|..+ +++++++. ++.+|+|||++|||+++++ ++++++++||+|++|++
T Consensus 294 i~~~~I~dla~~~L~~~------gI~~v~~v-----~k~~lerIa~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~i 357 (550)
T 3p9d_G 294 LSKLPIGDLATQFFADR------NIFCAGRV-----SADDMNRVIQAVGGSIQST-----TSDIKPEHLGTCALFEEMQI 357 (550)
T ss_dssp EESSCCCHHHHHTTGGG------TCEEEECC-----CTTHHHHHHHHTCCCCBSS-----GGGCCGGGCCCCSBCCCCCC
T ss_pred EECCCccHHHHHHHHHc------CCccccCc-----CHHHHHHHHHHhCCceecc-----hhhCCHHHcCCceEEEEEEe
Confidence 99999999998877743 47889888 5677999999999999996 99999999999999975
Q ss_pred ecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHc
Q 012481 279 TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE 358 (462)
Q Consensus 279 ~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~a~~~ 358 (462)
+++++++++||+++ +.|||+|||+|+++++|+||+++||||++|+++++
T Consensus 358 g~e~~~~~~g~~~~-------------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~ 406 (550)
T 3p9d_G 358 GSERYNLFQGCPQA-------------------------------KTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQN 406 (550)
T ss_dssp SSSCCEEEBCCTTC-------------------------------CCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCeEEEEEecCCCC-------------------------------ceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhc
Confidence 67899999999865 46899999999999999999999999999999999
Q ss_pred C-CcCChhHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCccccccC-
Q 012481 359 G-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPAR- 431 (462)
Q Consensus 359 g-vVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~- 431 (462)
| +|||||++|+++|++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+
T Consensus 407 g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g 486 (550)
T 3p9d_G 407 KLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETE 486 (550)
T ss_dssp CCEEETTTHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSS
T ss_pred CCcccCCCHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCC
Confidence 9 9999999999999999999765 899999999999999999999999999999999 999863 45789999987
Q ss_pred ---CchhcCCccccccHHHHHHHHHHHHHHHhcC
Q 012481 432 ---DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 462 (462)
Q Consensus 432 ---dm~~~gI~dP~~v~~~al~~A~~~A~~lL~i 462 (462)
||++.|||||+.||+++|++|+|+|++||+|
T Consensus 487 ~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~i 520 (550)
T 3p9d_G 487 NIGDNFAKFVWEPALVKINALNSATEATNLILSV 520 (550)
T ss_dssp SBCCHHHHTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred cccchHhccCEecHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999986
No 22
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=2e-83 Score=688.23 Aligned_cols=403 Identities=19% Similarity=0.210 Sum_probs=357.3
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012481 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (462)
Q Consensus 5 ~~~~lk~~~~~~p~~~~~~~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~i~~G~~~a~~~~~~~ 83 (462)
..||||+|++.||+||++ +++|++||+++||||||+||||++||++|.++++ |+||+.|++||++|.+.++++
T Consensus 87 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 160 (562)
T 3p9d_E 87 GATILSQMELDNEIAKLL------VQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISK 160 (562)
T ss_dssp HHHHHHHSCCCSHHHHHH------HHHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCCHHHHHH------HHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999966 7899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCC------HHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC-------cceeEe--cCCCccceeEE
Q 012481 84 LDCQARKITT------FEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-------DLITIF--DRKALYNELNF 142 (462)
Q Consensus 84 L~~~~~~v~~------~~~l~~vA~ts~~~------~~~l~~li~~a~~~vg~~-------~~I~v~--~g~~~~d~~~~ 142 (462)
|+++++|+++ ++.|.++|+||+++ .+.|++++++|+..+... +.|+|+ .|++.. ++++
T Consensus 161 L~~~s~~v~~~~~~~~~e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~-ds~l 239 (562)
T 3p9d_E 161 LEETCDDISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSIS-DSKL 239 (562)
T ss_dssp TTTTTSSSSBCCCSSCHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGG-GCEE
T ss_pred HHHhccCcCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChh-hhce
Confidence 9999998863 26899999999875 357899999999988642 346664 577765 5799
Q ss_pred EeeEEEeccccCCccccccccceeeecCceEEEeccc-------------cCCHHH-----------HHHHHHHHHHcCC
Q 012481 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNV-----------IRQASLPCMMQGQ 198 (462)
Q Consensus 143 ~~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Il~~d~~-------------i~~~~~-----------i~~~le~i~~~g~ 198 (462)
++||+||++|.||||+++.+ .+..+++|+|++++.+ |+++++ +.++++++.++|+
T Consensus 240 veGmv~dk~~~sp~m~~~~~-~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~ 318 (562)
T 3p9d_E 240 INGVILDKDFSHPQMPKCVL-PKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGA 318 (562)
T ss_dssp ESSEEESSCCCTTSCCC------TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred eeeEEEecCCCCCCcCcccc-cccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999987541 1112367777666643 455555 6799999999999
Q ss_pred CEEEEecCcchhhHhhHHhhccCCCCcEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEE
Q 012481 199 SLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA 278 (462)
Q Consensus 199 ~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~~~~~~~~~LG~a~~v~i 278 (462)
||||++++|+++++++|..|+ +++++++ ++++|+|||++|||+++++ ++++++++||+|++|++
T Consensus 319 ~vvI~~~~I~~~Al~~L~~~~------I~~v~~v-----~k~~le~ia~~TGa~iis~-----l~~l~~~~LG~a~~v~~ 382 (562)
T 3p9d_E 319 DVVICQWGFDDEANHLLLQND------LPAVRWV-----GGQELEHIAISTNGRIVPR-----FQDLSKDKLGTCSRIYE 382 (562)
T ss_dssp SCCEECSSCCSHHHHHHHTTT------CCCEECC-----CTTTHHHHHHHHCCCEEES-----SSCCCTTSCEECSCEEE
T ss_pred cEEEEeCCCCHHHHHHHHHCC------CEEEecc-----CHHHHHHHHHHhCCEEEec-----cccCCHHHCCcceEEEE
Confidence 999999999999999999876 5578888 4667999999999999996 89999999999999987
Q ss_pred -----ecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHH
Q 012481 279 -----TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQ 353 (462)
Q Consensus 279 -----~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k 353 (462)
+++++++|+||+++. .|||+|||+|+++++|+||+++||||++|
T Consensus 383 ~~ig~~~~~~~~i~g~~~~~-------------------------------~~TIllrG~te~~l~E~kr~i~DAL~~~r 431 (562)
T 3p9d_E 383 QEFGTTKDRMLIIEQSKETK-------------------------------TVTCFVRGSNKMIVDEAERALHDSLCVVR 431 (562)
T ss_dssp ECCSSSSCCEEEECCCSCCS-------------------------------CCEEEEECTTTTTHHHHTHHHHHHHHHHH
T ss_pred EEeccCCceEEEEecCCCCC-------------------------------eEEEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 358899999998763 57999999999999999999999999999
Q ss_pred HHHHcC-CcCChhHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCcc
Q 012481 354 AAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLG 426 (462)
Q Consensus 354 ~a~~~g-vVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~----~~~~~G 426 (462)
+++++| +|||||++|++++++|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|
T Consensus 432 ~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G 511 (562)
T 3p9d_E 432 NLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIG 511 (562)
T ss_dssp HHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBC
T ss_pred HHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCcee
Confidence 999999 9999999999999999999875 899999999999999999999999999999999 999863 457899
Q ss_pred ccccC----CchhcCCccccccHHHHHHHHHHHHHHHhcC
Q 012481 427 YNPAR----DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 462 (462)
Q Consensus 427 ~d~~~----dm~~~gI~dP~~v~~~al~~A~~~A~~lL~i 462 (462)
||+.+ ||++.|||||+.||+++|++|+++|++||+|
T Consensus 512 ~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 551 (562)
T 3p9d_E 512 VDCLGYGSNDMKELFVVDPFIGKKQQILLATQLCRMILKI 551 (562)
T ss_dssp CBTTTTBCCBTTTTTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred EecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHHH
Confidence 99987 9999999999999999999999999999986
No 23
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=4.7e-84 Score=689.62 Aligned_cols=396 Identities=19% Similarity=0.212 Sum_probs=360.2
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchHHHhhhHHHHHHHhhcC--CCChHHHHHHHHHHHHHHHH
Q 012481 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG--RANLTGLTQGFRMAADAVVR 82 (462)
Q Consensus 5 ~~~~lk~~~~~~p~~~~~~~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~--G~~P~~i~~G~~~a~~~~~~ 82 (462)
..||||+|++.||+||++ +++|++||+++||||||+||||++||++|++++. |+||+.|++||++|.+.+++
T Consensus 60 G~tIlk~i~~~hP~Akll------~e~a~~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~ 133 (527)
T 3p9d_B 60 GATILKSIPLDNPAAKVL------VNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALD 133 (527)
T ss_dssp HHHHHHTCCCCCHHHHHH------HHHHHHHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCHHHHHH------HHHHHHhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 468999999999999966 7899999999999999999999999999999997 99999999999999999999
Q ss_pred HHhccccccCC-----HHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccCc---ceeEec--CCCccceeEEEeeE
Q 012481 83 NLDCQARKITT-----FEEIAQVGTTAANG------DGEIGELIAKVFEKGWEND---LITIFD--RKALYNELNFVKGM 146 (462)
Q Consensus 83 ~L~~~~~~v~~-----~~~l~~vA~ts~~~------~~~l~~li~~a~~~vg~~~---~I~v~~--g~~~~d~~~~~~G~ 146 (462)
+|+++++++++ .+.|.++|+||+++ ++.|++++++|+.++++++ .|+|++ |++. +++++++||
T Consensus 134 ~L~~~s~~v~~~~~~~~~~l~~vA~tSl~sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~-~ds~lv~G~ 212 (527)
T 3p9d_B 134 ALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKL-SDSFLDEGF 212 (527)
T ss_dssp HHHHTCBCCCCCHHHHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSS-SCCCEESSC
T ss_pred HHHHhCccCCCcchhhHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCc-cccEEEEeE
Confidence 99999999875 68999999999986 5789999999999999887 788874 5555 468999999
Q ss_pred EEeccccCCccccccccceeeecCceEEEeccc--------------cCCHHHH-----------HHHHHHHHHcCCCEE
Q 012481 147 KLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK--------------ISNSNVI-----------RQASLPCMMQGQSLL 201 (462)
Q Consensus 147 ~~~~g~~~~~~~~~~~~~~~~l~~~~Il~~d~~--------------i~~~~~i-----------~~~le~i~~~g~~lv 201 (462)
+||++|.||| |+ .++||+|++++.+ +++++++ .+.++++.++|+|||
T Consensus 213 ~~dk~~~~~~----p~----~~~n~kIlll~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vv 284 (527)
T 3p9d_B 213 ILAKKFGNNQ----PK----RIENAKILIANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTF 284 (527)
T ss_dssp CCSCCCSSSC----CS----CCSSCEEEEECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEE
T ss_pred EEecccCCCC----Ce----eeecceEEEeccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 9999999997 33 4689999998764 3445544 678899999999999
Q ss_pred EEecCcchhhHhhHHhhccCCCCcEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEE---E
Q 012481 202 VVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---A 278 (462)
Q Consensus 202 ii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~~~~~~~~~LG~a~~v~---i 278 (462)
|++++|++.++++|..|+ |++|++++ +.+|+|||++|||+++++ ++++++++||+|++|+ +
T Consensus 285 i~~~~I~~~al~~L~~~~------i~av~~~~-----~~dle~ia~~tGa~iv~~-----~~~~~~~~LG~a~~v~~~~i 348 (527)
T 3p9d_B 285 INRQLIYDYPEQLFTDLG------INSIEHAD-----FEGVERLALVTGGEVVST-----FDEPSKCKLGECDVIEEIML 348 (527)
T ss_dssp ESSCCCTTTHHHHHHHTC------BCCCCCCH-----HHHHHHHHHHTCCCCCST-----TSCCTTSCEECSBCCBCCCS
T ss_pred EECCCCCHHHHHHHHHCC------CEEEecCC-----HHHHHHHHHHhCCEEecc-----hhhCCHHHCCCCcEEEEEEe
Confidence 999999999999999864 78999994 445999999999999997 8999999999999997 6
Q ss_pred ecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHc
Q 012481 279 TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE 358 (462)
Q Consensus 279 ~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~a~~~ 358 (462)
++++++++.||+++ +.|||+|||+|+++++|+||+++||||++|+++++
T Consensus 349 g~~~~~~~~g~~~~-------------------------------~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~ 397 (527)
T 3p9d_B 349 GEQPFLKFSGCKAG-------------------------------EACTIVLRGATDQTLDEAERSLHDALSVLSQTTKE 397 (527)
T ss_dssp SSCCBCCBCSSCCS-------------------------------CCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHC
T ss_pred cceEEEEEECCCCC-------------------------------CEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 78899999998764 67999999999999999999999999999999999
Q ss_pred C-CcCChhHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCccccccC-
Q 012481 359 G-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPAR- 431 (462)
Q Consensus 359 g-vVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~- 431 (462)
| +|||||++|++++++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+
T Consensus 398 g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g 477 (527)
T 3p9d_B 398 TRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNG 477 (527)
T ss_dssp CCEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSST
T ss_pred CCcccCCcHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCC
Confidence 9 9999999999999999999875 899999999999999999999999999999999 999863 45789999987
Q ss_pred ---CchhcCCccccccHHHHHHHHHHHHHHHhcC
Q 012481 432 ---DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 462 (462)
Q Consensus 432 ---dm~~~gI~dP~~v~~~al~~A~~~A~~lL~i 462 (462)
||++.|||||+.||+++|++|+|+|++||+|
T Consensus 478 ~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 511 (527)
T 3p9d_B 478 TIADMRQLGIVESYKLKRAVVSSASEAAEVLLRV 511 (527)
T ss_dssp TCCCHHHHTCEEETTHHHHHHHHHHHHHHHHHHC
T ss_pred CCcchHhccCEEcHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999986
No 24
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=9.4e-83 Score=677.41 Aligned_cols=396 Identities=17% Similarity=0.227 Sum_probs=348.1
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012481 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (462)
Q Consensus 5 ~~~~lk~~~~~~p~~~~~~~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~i~~G~~~a~~~~~~~ 83 (462)
..+|||+|++.||+|+++ +++|++||+++||||||+||||++||++|.++++ |+||+.|++||++|.+.++++
T Consensus 52 G~tIlk~i~v~hp~akll------~~~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 125 (517)
T 3iyg_Z 52 GNVLLHEMQIQHPTASLI------AKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQF 125 (517)
T ss_pred HHHHHHHccCcCHHHHHH------HHHHHHHHHHhCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999966 7899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC-CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccCc------ceeEe--cCCCccceeEEEeeEEE
Q 012481 84 LDCQARKIT-TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEND------LITIF--DRKALYNELNFVKGMKL 148 (462)
Q Consensus 84 L~~~~~~v~-~~~~l~~vA~ts~~~------~~~l~~li~~a~~~vg~~~------~I~v~--~g~~~~d~~~~~~G~~~ 148 (462)
|+++++|++ +.+.|.++|+||+++ .+.|++++++|+..+.+++ .|+|. .|++ .+++++++||+|
T Consensus 126 L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~-~~ds~lv~G~v~ 204 (517)
T 3iyg_Z 126 LEQVKVSKEMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKS-ETDTSLIRGLVL 204 (517)
T ss_pred HHhhCcCCCCCHHHHHHHHHHHhccccchhHHHHHHHHHHHHhheeccCCCcCChhHheeeeecCCC-ccccceEeeEEE
Confidence 999999987 788999999999875 3567888888887775432 23443 4544 467899999999
Q ss_pred eccccCCccccccccceeeecCceEEEeccccC-------------CHHHHH-----------HHHHHHHH--------c
Q 012481 149 EWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSNVIR-----------QASLPCMM--------Q 196 (462)
Q Consensus 149 ~~g~~~~~~~~~~~~~~~~l~~~~Il~~d~~i~-------------~~~~i~-----------~~le~i~~--------~ 196 (462)
|++|.||+|+ .+++||+|+++|.+++ +++++. ..++.+.. +
T Consensus 205 dk~~~~p~m~-------~~ien~kIll~~~~le~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~ 277 (517)
T 3iyg_Z 205 DHGARHPDMK-------KRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDS 277 (517)
T ss_pred eccCCCCCcc-------ccccCCeEEEecccccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Confidence 9999999974 3799999999998753 333322 23333332 3
Q ss_pred CCCEEEE-ecCcchhhHhhHHhhccCCCCcEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCCccCCCCCC-ceeee
Q 012481 197 GQSLLVV-AEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLK-LGSCK 274 (462)
Q Consensus 197 g~~lvii-~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~~~~~~~~~-LG~a~ 274 (462)
++|+||+ +++|++.++++|..+ +|++++++ ++.+|+|||++|||+++++ ++++++++ ||+|+
T Consensus 278 ~~~lvIi~~~~I~d~al~~L~~~------gI~~v~~v-----~~~~leria~~tGa~iv~~-----l~~l~~~~~LG~a~ 341 (517)
T 3iyg_Z 278 DKGFVVINQKGIDPFSLDALAKE------GIIALRRA-----KRRNMERLTLACGGIALNS-----LDDLNPDCLLGHAG 341 (517)
T ss_pred CCceEEEecccCCHHHHHHHHHC------CCEEEEec-----CHHHHHHHHHHhCCEEecc-----hhhCcccccCCcce
Confidence 5677766 589999999999875 38899988 4667999999999999996 99999999 99999
Q ss_pred EE---EEecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHH
Q 012481 275 RV---IATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHA 351 (462)
Q Consensus 275 ~v---~i~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a 351 (462)
| .++++++++++||++++ .|||+|||+|+++++|+||+++||||+
T Consensus 342 -v~e~~ig~~~~~~~~g~~~~~-------------------------------~~TI~lrG~t~~~l~E~kr~l~DAl~~ 389 (517)
T 3iyg_Z 342 -VYEYTLGEEKFTFIEKCNNPR-------------------------------SVTLLIKGPNKHTLTQIKDAIRDGLRA 389 (517)
T ss_pred -EEEEEEcCceEEEEeCCCCch-------------------------------hheeeecCCcHHHHHHHHHHHHHHHHH
Confidence 9 57889999999998874 379999999999999999999999999
Q ss_pred HHHHHHcC-CcCChhHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCc
Q 012481 352 VQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDL 425 (462)
Q Consensus 352 ~k~a~~~g-vVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~~~~ 425 (462)
+|+++++| +|||||++|+++|++|++|+.. ++++|+|+++|++||+.+|++||+|||+|+.++ .+|++. +++++
T Consensus 390 ~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~ 469 (517)
T 3iyg_Z 390 VKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLV 469 (517)
T ss_pred HHHHHhcceEecCccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcE
Confidence 99999999 9999999999999999999886 899999999999999999999999999999999 999873 45789
Q ss_pred cccccC----CchhcCCccccccHHHHHHHHHHHHHHHhcC
Q 012481 426 GYNPAR----DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 462 (462)
Q Consensus 426 G~d~~~----dm~~~gI~dP~~v~~~al~~A~~~A~~lL~i 462 (462)
|||+.+ ||++.|||||+.||+++|++|+++|++||+|
T Consensus 470 G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 510 (517)
T 3iyg_Z 470 GVDLNTGEPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLV 510 (517)
T ss_pred EEeCCCCcccchhhccCeecHHHHHHHHHHHHHHHHHHHHH
Confidence 999987 9999999999999999999999999999986
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=5.2e-82 Score=676.13 Aligned_cols=397 Identities=17% Similarity=0.213 Sum_probs=345.5
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012481 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (462)
Q Consensus 5 ~~~~lk~~~~~~p~~~~~~~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~i~~G~~~a~~~~~~~ 83 (462)
..||||+|++.||+||++ +++|++||+++||||||+||||++||++|.++++ |+||+.|++||++|.+.++++
T Consensus 59 G~tIlk~i~v~hP~akll------~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 132 (546)
T 3p9d_F 59 GKVLLTEMQIQSPTAVLI------ARAAAAQDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKF 132 (546)
T ss_dssp HHHHHHTSCCCCHHHHHH------HHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCcCHHHHHH------HHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH
Confidence 468999999999999976 6899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC----CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC-------cceeEe--cCCCccceeEEEe
Q 012481 84 LDCQARKIT----TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-------DLITIF--DRKALYNELNFVK 144 (462)
Q Consensus 84 L~~~~~~v~----~~~~l~~vA~ts~~~------~~~l~~li~~a~~~vg~~-------~~I~v~--~g~~~~d~~~~~~ 144 (462)
|+++++|++ +.+.|.++|+||+++ .+.|++++++|+..+.+. ..|.+. .|++ .+++++++
T Consensus 133 L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~-~~ds~lv~ 211 (546)
T 3p9d_F 133 LDEFKISKTNLSNDREFLLQVARSSLLTKVDADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLS-PKDTTFIK 211 (546)
T ss_dssp HHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHHHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSC-TTTCCCCS
T ss_pred HHHhhccccccccCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCC-ccccEEEe
Confidence 999999884 678999999999975 457899999999888531 135554 4554 45789999
Q ss_pred eEEEeccccCCccccccccceeeecCceEEEeccccC-------------CHHH-----------HHHHHHHHHH-----
Q 012481 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSNV-----------IRQASLPCMM----- 195 (462)
Q Consensus 145 G~~~~~g~~~~~~~~~~~~~~~~l~~~~Il~~d~~i~-------------~~~~-----------i~~~le~i~~----- 195 (462)
||+|+++|.||+|+ .+++||+|+++|.+++ ++++ +...++.+..
T Consensus 212 G~v~dk~~~~~~m~-------~~~en~kIll~~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v 284 (546)
T 3p9d_F 212 GLVLDHGGRHPDMP-------TRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEV 284 (546)
T ss_dssp SCEESCCCCSSSSC-------SSBCSCCCCEECCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred eEEEecccccccCc-------ceecCceEEEecCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999764 4799999999997653 2211 2233444443
Q ss_pred ----cCCCEEE-EecCcchhhHhhHHhhccCCCCcEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCCccCCCCCCc
Q 012481 196 ----QGQSLLV-VAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKL 270 (462)
Q Consensus 196 ----~g~~lvi-i~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~~~~~~~~~L 270 (462)
+|+|+|| ++++|+++++++|..|+ ++++|++ ++.+|+|||++|||+++++ ++++++++|
T Consensus 285 ~~~~~g~~~vIi~~k~I~~~Al~~L~~~g------I~~vr~v-----~~~~leria~~tGa~ii~~-----l~~l~~~~L 348 (546)
T 3p9d_F 285 CGMDPDKGFVIINQKGIDPMSLDVFAKHN------ILALRRA-----KRRNMERLQLVTGGEAQNS-----VEDLSPQIL 348 (546)
T ss_dssp --------CEEEESSCCCHHHHHHHTTTT------CEEECCC-----CHHHHHHHHHTTTBCCCCC-----CSSCSTTCC
T ss_pred hhhccCCceEEEecCcCcHHHHHHHHHCC------CeeEecC-----CHHHHHHHHHHhCCEEecc-----hhhCCHhHC
Confidence 5677554 45799999999999875 7899988 4556999999999999996 899999999
Q ss_pred eeeeEE---EEecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHH
Q 012481 271 GSCKRV---IATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITN 347 (462)
Q Consensus 271 G~a~~v---~i~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~D 347 (462)
|+|++| .+++++++|++||++++ .|||+|||+|+++++|+||+++|
T Consensus 349 G~a~~v~~~~ig~~~~~~i~g~~~~~-------------------------------~~tI~lrG~te~~l~E~kr~l~D 397 (546)
T 3p9d_F 349 GFSGLVYQETIGEEKFTYVTENTDPK-------------------------------SCTILIKGSTHYALAQTKDAVRD 397 (546)
T ss_dssp BCCCCBCBCCCSSCCCEECSSCSCCS-------------------------------CEEEECCCSCHHHHHHHHHHHHH
T ss_pred CcccEEEEEEecCceEEEEecCCCCc-------------------------------eEEEEECCCCHHHHHHHHHHHHH
Confidence 999999 57889999999998864 58999999999999999999999
Q ss_pred HHHHHHHHHHcC-CcCChhHHHHHHHHHHHH---hcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc-
Q 012481 348 ALHAVQAAKEEG-IVPGSGVALLYASKELDK---LQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ- 420 (462)
Q Consensus 348 Al~a~k~a~~~g-vVpGGGa~el~~s~~L~~---~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~- 420 (462)
|||++|+++++| +|||||++|+++|++|++ |+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++.
T Consensus 398 Al~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h 477 (546)
T 3p9d_F 398 GLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDEL 477 (546)
T ss_dssp HHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHH
T ss_pred HHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHh
Confidence 999999999998 999999999999999998 5665 899999999999999999999999999999999 999863
Q ss_pred -------CCCCccccccC----CchhcCCccccccHHHHHHHHHHHHHHHhcC
Q 012481 421 -------DSSDLGYNPAR----DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 462 (462)
Q Consensus 421 -------~~~~~G~d~~~----dm~~~gI~dP~~v~~~al~~A~~~A~~lL~i 462 (462)
+++++|||+.+ ||++.|||||+.||+++|++|+++|++||+|
T Consensus 478 ~~~~~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~i 530 (546)
T 3p9d_F 478 DDAQDSDETRYVGVDLNIGDSCDPTIEGIWDSYRVLRNAITGATGIASNLLLC 530 (546)
T ss_dssp HHHTTSTTSSCCCCBTTTTBCCCSGGGTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred hhhhcccCCceeeEeCCCCeecchHhccCEecHHHHHHHHHHHHHHHHHHHHH
Confidence 44679999987 9999999999999999999999999999986
No 26
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=4.2e-81 Score=671.05 Aligned_cols=397 Identities=15% Similarity=0.148 Sum_probs=351.7
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012481 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (462)
Q Consensus 5 ~~~~lk~~~~~~p~~~~~~~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~i~~G~~~a~~~~~~~ 83 (462)
..||||+|++.||+||++ +++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|.+.++++
T Consensus 68 G~TIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~ 141 (568)
T 3p9d_H 68 AATMLRELDIVHPAVKVL------VMATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKE 141 (568)
T ss_dssp HHHHTTTCCCCCHHHHHH------HHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccCCHHHHHH------HHHHHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999966 7899999999999999999999999999999999 999999999999999999999
Q ss_pred Hhcccccc----CCHHHHHHHHHHhcC-----CChhHHHHHHHHHHhhccC-----c-------ceeEec--CCCcccee
Q 012481 84 LDCQARKI----TTFEEIAQVGTTAAN-----GDGEIGELIAKVFEKGWEN-----D-------LITIFD--RKALYNEL 140 (462)
Q Consensus 84 L~~~~~~v----~~~~~l~~vA~ts~~-----~~~~l~~li~~a~~~vg~~-----~-------~I~v~~--g~~~~d~~ 140 (462)
|++++.++ .+.+.|.++|+||++ +++.|++++++|+.+++++ + .|+|+. |++.. ++
T Consensus 142 L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~-dS 220 (568)
T 3p9d_H 142 LDEMVVGEITDKNDKNELLKMIKPVISSKKYGSEDILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLS-NS 220 (568)
T ss_dssp HHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGG-GC
T ss_pred HHHhccccCCCCCCHHHHHHHHHHHhhccCcchHHHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcc-hh
Confidence 99999876 567899999999864 3578999999999999864 3 477754 77775 57
Q ss_pred EEEeeEEEeccccCCccccccccceeeec---CceEEEeccc-------------cCCHHHHHH-----------HHHHH
Q 012481 141 NFVKGMKLEWGLKSPYFFTHKNKKECVLD---GALVLIYDTK-------------ISNSNVIRQ-----------ASLPC 193 (462)
Q Consensus 141 ~~~~G~~~~~g~~~~~~~~~~~~~~~~l~---~~~Il~~d~~-------------i~~~~~i~~-----------~le~i 193 (462)
++++|++|+++|. +| +.+++ ||+|+++|.+ |++++++.+ +++++
T Consensus 221 ~lv~G~v~dk~~~--~m-------~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I 291 (568)
T 3p9d_H 221 TVIKGMVFNREPE--GH-------VKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEI 291 (568)
T ss_dssp EEESSCCBSSCBS--SG-------GGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeccEEEeeccc--CC-------cEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999974 33 33677 9999999987 666766654 67889
Q ss_pred HHcCCCEEEEecCcchhhHhhHHhhccCCCCcEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceee
Q 012481 194 MMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSC 273 (462)
Q Consensus 194 ~~~g~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~~~~~~~~~LG~a 273 (462)
.+.|+||||++++|++.++++|..++ |++||+|+ +.+|+|||++|||+++++ ++++++++||+|
T Consensus 292 ~~~g~~vvi~~~~I~~~al~~L~~~g------I~av~~v~-----~~~leria~~tGa~ivs~-----l~~l~~~~LG~a 355 (568)
T 3p9d_H 292 ADMGVECIVAGAGVGELALHYLNRYG------ILVLKVPS-----KFELRRLCRVCGATPLPR-----LGAPTPEELGLV 355 (568)
T ss_dssp HHTTCCEEEECSCCCHHHHHHHHHHT------CEEECCCC-----HHHHHHHHHHHSCCCCSS-----SSCCCGGGCEEC
T ss_pred HhcCCeEEEECCCcChHHHHHHHHCC------eEEEecCC-----HHHHHHHHHHhCCEEEec-----cccCCHHHCCcc
Confidence 99999999999999999999999863 89999994 556999999999999997 899999999999
Q ss_pred eEEEE---ecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHH
Q 012481 274 KRVIA---TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALH 350 (462)
Q Consensus 274 ~~v~i---~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~ 350 (462)
++|++ ++++++++++|+. |+++.|||+|||+|+++++|+||+++||||
T Consensus 356 ~~v~~~~ig~~~~~~~~g~~~-----------------------------l~~~~~TIllrG~t~~~l~E~er~i~DAL~ 406 (568)
T 3p9d_H 356 ETVKTMEIGGDRVTVFKQEQG-----------------------------EISRTSTIILRGATQNNLDDIERAIDDGVA 406 (568)
T ss_dssp SCCCCCEETTEECBCCCCCSS-----------------------------SCCSSCEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEecCceEEEEecCCC-----------------------------CCCCeEEEEECCCcHHHHHHHHHHHHHHHH
Confidence 99864 5588999999873 124679999999999999999999999999
Q ss_pred HHHHHHH--c-CCcCChhHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc-----
Q 012481 351 AVQAAKE--E-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----- 420 (462)
Q Consensus 351 a~k~a~~--~-gvVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~----- 420 (462)
++|++++ + ++|||||++|+++|++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++.
T Consensus 407 vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~ 486 (568)
T 3p9d_H 407 AVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTE 486 (568)
T ss_dssp HHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSS
T ss_pred HHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhc
Confidence 9999999 5 69999999999999999999875 899999999999999999999999999999999 999874
Q ss_pred ------CCCCccccccC-------CchhcCCccccccHHHHHHHHHHHHHHHhcC
Q 012481 421 ------DSSDLGYNPAR-------DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 462 (462)
Q Consensus 421 ------~~~~~G~d~~~-------dm~~~gI~dP~~v~~~al~~A~~~A~~lL~i 462 (462)
+++++|||+.+ ||++.|||||+.||+++|++|+|+|++||||
T Consensus 487 ~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 541 (568)
T 3p9d_H 487 PGAVKTDHLYKGVDIDGESDEGVKDIREENIYDMLATKKFAINVATEAATTVLSI 541 (568)
T ss_dssp CCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHHHHHHHHHHHHCCEECBCCC---
T ss_pred ccccccCCCceeEcccCCCcccccChHHccCEEcHHHHHHHHHHHHHHHHHHHhH
Confidence 34578999853 8999999999999999999999999999986
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.1e-49 Score=360.09 Aligned_cols=189 Identities=38% Similarity=0.559 Sum_probs=185.0
Q ss_pred eEEEeeEEEeccccCCccccccccceeeecCceEEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCcchhhHhhHHhhc
Q 012481 140 LNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDF 219 (462)
Q Consensus 140 ~~~~~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Il~~d~~i~~~~~i~~~le~i~~~g~~lvii~~~i~~~al~~l~~n~ 219 (462)
+++++||+||+||+||||++++++|.++++||+||++|.+|++.++++|+||.+.++|+||+||++|+++++|++|+.|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHH
Q 012481 220 TCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERC 299 (462)
Q Consensus 220 ~~~~~~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~~~~~~~~~LG~a~~v~i~~~~~~~~~g~~~~~~i~~r~ 299 (462)
++|.+++||||.|+|||+||+.|+|||.+|||++++++.|+++++++.++||+|++|.+++++|+++.|.++++.|+.|+
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccc----HHHHHHHhhhcCCeEEE
Q 012481 300 EQLRSTIKLSTS----DKLKDRLAKLSGGYAVL 328 (462)
Q Consensus 300 ~~l~~~l~~~~s----~~l~~Rl~~l~g~~~tI 328 (462)
++++++++.++| |+|+||||||+||+|.|
T Consensus 162 ~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999988 99999999999999865
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=7.6e-48 Score=350.49 Aligned_cols=185 Identities=35% Similarity=0.527 Sum_probs=180.9
Q ss_pred EeeEEEeccccCCccccccccceeeecCceEEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCcchhhHhhHHhhccCC
Q 012481 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCT 222 (462)
Q Consensus 143 ~~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Il~~d~~i~~~~~i~~~le~i~~~g~~lvii~~~i~~~al~~l~~n~~~~ 222 (462)
.+||.||+||+||||++++++|.+++++|+||++|.+|+++++++|+||.+.++|+|||||++||++++|++|+.|+++|
T Consensus 12 ~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg 91 (201)
T 3osx_A 12 SEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRG 91 (201)
T ss_dssp CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHT
T ss_pred ccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccc
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHH
Q 012481 223 TEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQL 302 (462)
Q Consensus 223 ~~~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~~~~~~~~~LG~a~~v~i~~~~~~~~~g~~~~~~i~~r~~~l 302 (462)
.++|||||.|+|||+||+.|+|||.+|||++++++.|+++++++.++||+|++|.+++++|+++.|.++++.|+.|+++|
T Consensus 92 ~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~qI 171 (201)
T 3osx_A 92 IVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQI 171 (201)
T ss_dssp SCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccc----HHHHHHHhhhcCCeEE
Q 012481 303 RSTIKLSTS----DKLKDRLAKLSGGYAV 327 (462)
Q Consensus 303 ~~~l~~~~s----~~l~~Rl~~l~g~~~t 327 (462)
+++|+.++| |+|+||||||+||+|+
T Consensus 172 r~qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 172 RQQIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 999999988 9999999999999873
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=1.4e-38 Score=276.56 Aligned_cols=144 Identities=34% Similarity=0.535 Sum_probs=141.9
Q ss_pred eEEEeccccCCccccccccceeeecCceEEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCcchhhHhhHHhhccCCCC
Q 012481 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTE 224 (462)
Q Consensus 145 G~~~~~g~~~~~~~~~~~~~~~~l~~~~Il~~d~~i~~~~~i~~~le~i~~~g~~lvii~~~i~~~al~~l~~n~~~~~~ 224 (462)
||+||+||+||||++++++|.+++++|+||++|.+|++.++++|+||++.++|+||+||++|+++++|++|+.|+++|.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEecceEEEEcC
Q 012481 225 KVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGG 288 (462)
Q Consensus 225 ~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~~~~~~~~~LG~a~~v~i~~~~~~~~~g 288 (462)
++||||.|+|||+||+.|+|||.+|||++++++.|.++++++.++||+|++|.++++++++++|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999876
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.87 E-value=6.4e-22 Score=181.97 Aligned_cols=145 Identities=10% Similarity=0.168 Sum_probs=120.0
Q ss_pred ceeEEEeeEEEeccccCCccccccccceeeecCceEEEeccccC-------------CHH-----------HHHHHHHHH
Q 012481 138 NELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSN-----------VIRQASLPC 193 (462)
Q Consensus 138 d~~~~~~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Il~~d~~i~-------------~~~-----------~i~~~le~i 193 (462)
+++++++|++|++++.+|.|++ .++||+|++++.+++ +++ .+..++++|
T Consensus 2 ~dS~lv~Gvvl~k~~~~~~mpk-------~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI 74 (178)
T 1gml_A 2 EDSCVLRGVMINKDVTHPRMRR-------YIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDI 74 (178)
T ss_dssp -CCSEEEEEEESCCCSSTTSCC-------EEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEEEEeccccCCCCCc-------ccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3678999999999999887643 689999999998654 222 245677889
Q ss_pred HHcCCCEEEEecCcchhhHhhHHhhccCCCCcEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCCccCCCCCCcee-
Q 012481 194 MMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS- 272 (462)
Q Consensus 194 ~~~g~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~~~~~~~~~LG~- 272 (462)
.+.|.++|+++++|++.++++|..+ +|++++++ ++++|++||++|||+++++ ++++++++||+
T Consensus 75 ~~~g~nVVl~~k~I~d~a~~~l~k~------gI~~vr~v-----~~~dleria~atGa~iv~~-----~~~l~~~~LG~~ 138 (178)
T 1gml_A 75 IQLKPDVVITEKGISDLAQHYLMRA------NVTAIRRV-----RKTDNNRIARACGARIVSR-----PEELREDDVGTG 138 (178)
T ss_dssp HTTCCSEEEESSCBCHHHHHHHHHT------TCEEECCC-----CHHHHHHHHHHHCCCEESC-----GGGCCGGGSBCC
T ss_pred hhcCCcEEEECCcccHHHHHHHHHC------CCEEEecC-----CHHHHHHHHHHhCCeEeCC-----hhhCChhhhCCc
Confidence 9999999999999999999999975 48999999 4667999999999999997 99999999999
Q ss_pred eeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHh
Q 012481 273 CKRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKA 336 (462)
Q Consensus 273 a~~v~---i~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~ 336 (462)
|+.|+ ++++++++|+||++++ .|||++||+|.+
T Consensus 139 ~~~v~~~~ig~~~~~~~~gc~~~~-------------------------------~~TIllRG~~~~ 174 (178)
T 1gml_A 139 AGLLEIKKIGDEYFTFITDCKDPK-------------------------------ACTILLRGASHH 174 (178)
T ss_dssp EEEEEEEEETTEEEEEEEEESSTT-------------------------------SCEEEEEC----
T ss_pred ccEEEEEEECCeEEEEEECCCCCC-------------------------------EEEEEEECCCcc
Confidence 99986 4678899999998764 589999999875
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.77 E-value=2.2e-18 Score=155.42 Aligned_cols=127 Identities=17% Similarity=0.273 Sum_probs=108.2
Q ss_pred EeeEEEeccccCCccccccccceeeecCceEEEeccccC-------------CHHH-----------HHHHHHHHHHcCC
Q 012481 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSNV-----------IRQASLPCMMQGQ 198 (462)
Q Consensus 143 ~~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Il~~d~~i~-------------~~~~-----------i~~~le~i~~~g~ 198 (462)
++|++|++++.+|.|++ .++||+|++++.+++ ++++ +...+++|.+.|.
T Consensus 1 i~Gvv~~k~~~~~~mpk-------~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPD-------VVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCTTSCS-------EEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCCCCCc-------CcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 47999999999987743 689999999998654 3332 4567788999999
Q ss_pred CEEEEecCcchhhHhhHHhhccCCCCcEEEEeecCcchhhhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEE-
Q 012481 199 SLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI- 277 (462)
Q Consensus 199 ~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tG~~i~~~~~~~~~~~~~~~~LG~a~~v~- 277 (462)
++|+++++|++.++++|..+ +|++++++ ++++|++||++|||+++++ ++++++++||+|+.|+
T Consensus 74 nVVl~~k~I~d~a~~~l~k~------gI~~v~~v-----~~~dleria~atGa~iv~~-----~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKE------GIYAVRRV-----KKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHT------TCEEECSC-----CHHHHHHHHHHHTCCCBSS-----TTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHC------CCEEEccC-----CHHHHHHHHHHhCCeeeCc-----cccCCcccCccceEEEE
Confidence 99999999999999999974 48999999 4667999999999999997 8999999999999996
Q ss_pred --EecceEEEEcCCCCh
Q 012481 278 --ATMDNVVIIGGSGEL 292 (462)
Q Consensus 278 --i~~~~~~~~~g~~~~ 292 (462)
++++++++|+||++.
T Consensus 138 ~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp EEETTEEEEEEESCC--
T ss_pred EEECCeEEEEEECCCCc
Confidence 468899999999864
Done!