BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012483
(462 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2BGH|A Chain A, Crystal Structure Of Vinorine Synthase
pdb|2BGH|B Chain B, Crystal Structure Of Vinorine Synthase
Length = 421
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 149/440 (33%), Positives = 228/440 (51%), Gaps = 49/440 (11%)
Query: 7 KVDVVARETIKPSSPTPKALEDFKLCLMDQSAPAMFTALLFFYPAANDADHDTENKIAEK 66
+++ V+ E I PSSPTP++L+ +K+ +DQ + FYP D++ D A+
Sbjct: 4 QMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDP----AQT 59
Query: 67 LRHLKSSLSKMLTQLYPLAGIIKDHITIECNDEGAEFVEARVSCRLCDILKQPDSV-LLG 125
+HLK SLSK+LT YPLAG I + +++CND G FVEARV +L ++ + L
Sbjct: 60 SQHLKQSLSKVLTHFYPLAGRINVNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLD 119
Query: 126 NFLPVEIESTAAQSGRL-------LFVQANLFTCGGLAIGVCISHKIADAATLGTFINSW 178
+LP S A G++ L V+ + F CGG AIGV +SHKIAD +L TF+N+W
Sbjct: 120 QYLP----SAAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAW 175
Query: 179 ATAAAAADPXXXXXXXXXXXRPTHESPASPLFMASSLFPPSDTQIPTMRLIPDK-YATKR 237
R E +A+ FPP D P+ L+PD+ KR
Sbjct: 176 TATC----------------RGETEIVLPNFDLAARHFPPVDN-TPSPELVPDENVVMKR 218
Query: 238 YVFNTSNXXXXXXXXXXXXVQQP-TRVESVTALMWKCMINVTRSNKGLKKLSLVSHSVDL 296
+VF+ ++ +RV+ V A +WK +I+VTR+ G K +V +V+L
Sbjct: 219 FVFDKEKIGALRAQASSASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNL 278
Query: 297 RKRVVPPLPENTIGNIVGMFFSAQPVAAEEEIDLPGLVWALRKA-KKEFDKNALEMINVE 355
R R+ PPLP +GNI + F+A V AE + D P L+ LR + +K D + E++
Sbjct: 279 RSRMNPPLPHYAMGNIATLLFAA--VDAEWDKDFPDLIGPLRTSLEKTEDDHNHELLK-- 334
Query: 356 KRTWLKMCGVVDLFARRNDVDYCAYTSWCRFPLYEADFGWGKPVWVTLPHTMLKNVVYLL 415
G+ L+ + ++TSWCR Y+ DFGWGKP+ +N L+
Sbjct: 335 --------GMTCLYELEPQ-ELLSFTSWCRLGFYDLDFGWGKPLSACTTTFPKRNAALLM 385
Query: 416 DTKDGEGIEALVSLTKEDMA 435
DT+ G+G+EA + + +++MA
Sbjct: 386 DTRSGDGVEAWLPMAEDEMA 405
>pdb|4G0B|A Chain A, Structure Of Native Hct From Coffea Canephora
pdb|4G0B|B Chain B, Structure Of Native Hct From Coffea Canephora
Length = 436
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 191/460 (41%), Gaps = 55/460 (11%)
Query: 4 SVMKVDVVARETIKPSSPTPKALEDFKLCLMDQSAPAMFTALLFFYPAANDADHDTENKI 63
MK++V ++P+ TP + +D P T ++FY + N
Sbjct: 1 GAMKIEVKESTMVRPAQETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTG-----SSNFF 53
Query: 64 AEKLRHLKSSLSKMLTQLYPLAGIIK----DHITIECNDEGAEFVEARVSCRLCDILKQP 119
K+ LK +LS+ L YP+AG +K I IECN EG FVEA + D
Sbjct: 54 DAKV--LKDALSRALVPFYPMAGRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFA 111
Query: 120 DSVLLGNFLPVEIESTAAQSGRLLFVQANLFTCGGLAIGVCISHKIADAATLGTFINSWA 179
++ L +P S S LL +Q F CGG+++GV + H AD + FINSW+
Sbjct: 112 PTLELRRLIPAVDYSQGISSYALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWS 171
Query: 180 TAAAAADPXXXXXXXXXXXRPTHESPASPLFMASSLFPPSDTQIPTMRLIPDKYATKRYV 239
A D R P P F PP P +++ P + A V
Sbjct: 172 DMARGLDVTLPPFIDRTLLRA--RDPPQPQFQHIEYQPP-----PALKVSP-QTAKSDSV 223
Query: 240 FNTSNXXXXXXXXXXXXVQQPTR----------VESVTALMWKCMINVTRSNKGLK--KL 287
T+ ++ ++ E + +W+C +GL+ +
Sbjct: 224 PETAVSIFKLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKA----RGLEVDQG 279
Query: 288 SLVSHSVDLRKRVVPPLPENTIGNIVGMFFSAQPVAAEEEIDLPGLVW--------ALRK 339
+ + + D R R+ P LP GN++ F+A P+A +++ VW AL +
Sbjct: 280 TKLYIATDGRARLRPSLPPGYFGNVI---FTATPIAIAGDLEFKP-VWYAASKIHDALAR 335
Query: 340 AKKEFDKNALEMINVEKRTWLKMCGVVDLFARRNDVDYCAYTSWCRFPLYEADFGWGKPV 399
++ ++AL+ + ++ + G A TSW R P+++ADFGWG+P+
Sbjct: 336 MDNDYLRSALDYLELQPDLKALVRG-----AHTFKCPNLGITSWVRLPIHDADFGWGRPI 390
Query: 400 WVTLPHTMLKNVVYLLDTKDGEG-IEALVSLTKEDMAEFE 438
++ + + ++L + +G + +SL E M F+
Sbjct: 391 FMGPGGIAYEGLSFILPSPTNDGSMSVAISLQGEHMKLFQ 430
>pdb|4G2M|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora
(Crystal Form 2)
Length = 439
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 188/461 (40%), Gaps = 53/461 (11%)
Query: 2 AESVMKVDVVARETIKPSSPTPKALEDFKLCLMDQSAPAMFTALLFFYPAANDADHDTEN 61
A MK++V ++P+ TP + +D P T ++FY + N
Sbjct: 2 AMGSMKIEVKESTMVRPAQETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTG-----SSN 54
Query: 62 KIAEKLRHLKSSLSKMLTQLYPLAGIIK----DHITIECNDEGAEFVEARVSCRLCDILK 117
K+ LK +LS+ L YP+AG +K I IECN EG FVEA + D
Sbjct: 55 FFDAKV--LKDALSRALVPFYPMAGRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGD 112
Query: 118 QPDSVLLGNFLPVEIESTAAQSGRLLFVQANLFTCGGLAIGVCISHKIADAATLGTFINS 177
++ L +P S S LL +Q F CGG+++GV + H AD + FINS
Sbjct: 113 FAPTLELRRLIPAVDYSQGISSYALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINS 172
Query: 178 WATAAAAADPXXXXXXXXXXXRPTHESPASPLFMASSLFPPSDTQIPTMRLIPDKYA--- 234
W+ A D R P P F PP P + + P A
Sbjct: 173 WSDMARGLDVTLPPFIDRTLLRA--RDPPQPQFQHIEYQPP-----PALAVSPQTAASDS 225
Query: 235 ---TKRYVFNTSNXXXXXXXXXXXXVQQPTRVESVTAL---MWKCMINVTRSNKGLK--K 286
T +F + S L +W+C +GL+ +
Sbjct: 226 VPETAVSIFKLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKA----RGLEVDQ 281
Query: 287 LSLVSHSVDLRKRVVPPLPENTIGNIVGMFFSAQPVAAEEEIDLPGLVW--------ALR 338
+ + + D R R+ P LP GN++ F+A P+A +++ VW AL
Sbjct: 282 GTKLYIATDGRARLRPSLPPGYFGNVI---FTATPIAIAGDLEFKP-VWYAASKIHDALA 337
Query: 339 KAKKEFDKNALEMINVEKRTWLKMCGVVDLFARRNDVDYCAYTSWCRFPLYEADFGWGKP 398
+ ++ ++AL+ + ++ + G F N TSW R P+++ADFGWG+P
Sbjct: 338 RMDNDYLRSALDYLELQPDLKALVRG-AHTFKXPN----LGITSWVRLPIHDADFGWGRP 392
Query: 399 VWVTLPHTMLKNVVYLLDTKDGEG-IEALVSLTKEDMAEFE 438
+++ + + ++L + +G + +SL E M F+
Sbjct: 393 IFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQGEHMKLFQ 433
>pdb|4G22|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora
(Crystal Form 1)
pdb|4G22|B Chain B, Structure Of A Lys-Hct Mutant From Coffea Canephora
(Crystal Form 1)
Length = 439
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 187/461 (40%), Gaps = 53/461 (11%)
Query: 2 AESVMKVDVVARETIKPSSPTPKALEDFKLCLMDQSAPAMFTALLFFYPAANDADHDTEN 61
A MK++V ++P+ TP + +D P T ++FY + N
Sbjct: 2 AMGSMKIEVKESTMVRPAQETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTG-----SSN 54
Query: 62 KIAEKLRHLKSSLSKMLTQLYPLAGIIK----DHITIECNDEGAEFVEARVSCRLCDILK 117
K+ LK +LS+ L YP+AG +K I IECN EG FVEA + D
Sbjct: 55 FFDAKV--LKDALSRALVPFYPMAGRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGD 112
Query: 118 QPDSVLLGNFLPVEIESTAAQSGRLLFVQANLFTCGGLAIGVCISHKIADAATLGTFINS 177
++ L +P S S LL +Q F GG+++GV + H AD + FINS
Sbjct: 113 FAPTLELRRLIPAVDYSQGISSYALLVLQVTYFKXGGVSLGVGMRHHAADGFSGLHFINS 172
Query: 178 WATAAAAADPXXXXXXXXXXXRPTHESPASPLFMASSLFPPSDTQIPTMRLIPDKYA--- 234
W+ A D R P P F PP P + + P A
Sbjct: 173 WSDMARGLDVTLPPFIDRTLLRA--RDPPQPQFQHIEYQPP-----PALAVSPQTAASDS 225
Query: 235 ---TKRYVFNTSNXXXXXXXXXXXXVQQPTRVESVTAL---MWKCMINVTRSNKGLK--K 286
T +F + S L +W+C +GL+ +
Sbjct: 226 VPETAVSIFKLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKA----RGLEVDQ 281
Query: 287 LSLVSHSVDLRKRVVPPLPENTIGNIVGMFFSAQPVAAEEEIDLPGLVW--------ALR 338
+ + + D R R+ P LP GN++ F+A P+A +++ VW AL
Sbjct: 282 GTKLYIATDGRARLRPSLPPGYFGNVI---FTATPIAIAGDLEFKP-VWYAASKIHDALA 337
Query: 339 KAKKEFDKNALEMINVEKRTWLKMCGVVDLFARRNDVDYCAYTSWCRFPLYEADFGWGKP 398
+ ++ ++AL+ + ++ + G F N TSW R P+++ADFGWG+P
Sbjct: 338 RMDNDYLRSALDYLELQPDLKALVRG-AHTFKXPN----LGITSWVRLPIHDADFGWGRP 392
Query: 399 VWVTLPHTMLKNVVYLLDTKDGEG-IEALVSLTKEDMAEFE 438
+++ + + ++L + +G + +SL E M F+
Sbjct: 393 IFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQGEHMKLFQ 433
>pdb|2E1T|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat
Complexed With Malonyl-coa
pdb|2E1T|B Chain B, Crystal Structure Of Dendranthema Morifolium Dmat
Complexed With Malonyl-coa
pdb|2E1U|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat
pdb|2E1U|B Chain B, Crystal Structure Of Dendranthema Morifolium Dmat
Length = 454
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 139/398 (34%), Gaps = 85/398 (21%)
Query: 46 LFFYPAANDADHDTENKIAEKLRHLKSSLSKMLTQLYPLAGII--------KDHIT-IEC 96
LFFY TE + ++K SLS L YP G + K I +E
Sbjct: 45 LFFYELPITRSQFTETVVP----NIKHSLSITLKHFYPFVGKLVVYPAPTKKPEICYVEG 100
Query: 97 NDEGAEFVEARVSC--------RLCDILKQPDSVLLGNFLPVEIESTAAQSG---RLLFV 145
+ F E + R CD + +P+ EST L V
Sbjct: 101 DSVAVTFAECNLDLNELTGNHPRNCDKFY--------DLVPILGESTRLSDCIKIPLFSV 152
Query: 146 QANLFTCGGLAIGVCISHKIADAATLGTFINSWATAAAAADPXXXXXXXXXXXRPTHESP 205
Q LF G+AIG+ H + DA+T F+ +W + A + + RP ++
Sbjct: 153 QVTLFPNQGIAIGITNHHCLGDASTRFCFLKAWTSIARSGN--NDESFLANGTRPLYDRI 210
Query: 206 AS-PL-----------------FMASSLFPPSDTQIPTMRLIPDKYATKRYVFNTSNXXX 247
P+ ++ SL PSD T L R V N
Sbjct: 211 IKYPMLDEAYLKRAKVESFNEDYVTQSLAGPSDKLRATFIL-------TRAVIN------ 257
Query: 248 XXXXXXXXXVQQPT--RVESVT---ALMWKCMINVTRSNKGLKKLSLVSHSVDLRKRVVP 302
Q PT V S T A +W C I +R++ KL L +D R R+ P
Sbjct: 258 --QLKDRVLAQLPTLEYVSSFTVACAYIWSC-IAKSRND----KLQLFGFPIDRRARMKP 310
Query: 303 PLPENTIGNIVGMFFSAQPVAAEEEIDLPGLVWALRKAKKEFDKNALEMINVEKRTWLK- 361
P+P GN VG AA + +L A K +N + + K LK
Sbjct: 311 PIPTAYFGNCVG------GCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKD 364
Query: 362 -MCGVVDLFARRNDVDYCAYTSWCRFPLYEADFGWGKP 398
M DL + + + Y+ DFGWGKP
Sbjct: 365 DMESFNDLVSEGMPTTMTWVSGTPKLRFYDMDFGWGKP 402
>pdb|2E1V|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat, Seleno-
Methionine Derivative
pdb|2E1V|B Chain B, Crystal Structure Of Dendranthema Morifolium Dmat, Seleno-
Methionine Derivative
Length = 454
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 137/399 (34%), Gaps = 87/399 (21%)
Query: 46 LFFYPAANDADHDTENKIAEKLRHLKSSLSKMLTQLYPLAGII--------KDHITIECN 97
LFFY TE + ++K SLS L YP G + K I C
Sbjct: 45 LFFYELPITRSQFTETVVP----NIKHSLSITLKHFYPFVGKLVVYPAPTKKPEI---CY 97
Query: 98 DEGAEFVEARVSCRLCDILKQPDSVLLGN----------FLPVEIESTAAQSG---RLLF 144
EG C L D+ + L GN +P+ EST L
Sbjct: 98 VEGDSVAVTFAECNL-DL-----NELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFS 151
Query: 145 VQANLFTCGGLAIGVCISHKIADAATLGTFINSWATAAAAADPXXXXXXXXXXXRPTHE- 203
VQ LF G+AIG+ H + DA+T F+ +W + A + + RP ++
Sbjct: 152 VQVTLFPNQGIAIGITNHHCLGDASTRFCFLKAWTSIARSGN--NDESFLANGTRPLYDR 209
Query: 204 -----------------SPASPLFMASSLFPPSDTQIPTMRLIPDKYATKRYVFNTSNXX 246
+ ++ SL PSD T L R V N
Sbjct: 210 IIKYPXLDEAYLKRAKVESFNEDYVTQSLAGPSDKLRATFIL-------TRAVIN----- 257
Query: 247 XXXXXXXXXXVQQPT--RVESVT---ALMWKCMINVTRSNKGLKKLSLVSHSVDLRKRVV 301
Q PT V S T A +W C I +R++ KL L +D R R
Sbjct: 258 ---QLKDRVLAQLPTLEYVSSFTVACAYIWSC-IAKSRND----KLQLFGFPIDRRARXK 309
Query: 302 PPLPENTIGNIVGMFFSAQPVAAEEEIDLPGLVWALRKAKKEFDKNALEMINVEKRTWLK 361
PP+P GN VG AA + +L A K +N + + K LK
Sbjct: 310 PPIPTAYFGNCVGG------CAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLK 363
Query: 362 --MCGVVDLFARRNDVDYCAYTSWCRFPLYEADFGWGKP 398
DL + + + Y+ DFGWGKP
Sbjct: 364 DDXESFNDLVSEGXPTTXTWVSGTPKLRFYDXDFGWGKP 402
>pdb|2XR7|A Chain A, Crystal Structure Of Nicotiana Tabacum Malonyltransferase
(Ntmat1) Complexed With Malonyl-Coa
Length = 453
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 63/157 (40%), Gaps = 40/157 (25%)
Query: 261 TRVESVT---ALMWKCMIN---VTRSNKGLKKLSLVSHSVDLRKRVVPPLPENTIGN-IV 313
T V S T A +W C+I T + D R + PPLP + GN +V
Sbjct: 265 THVTSFTVTCAYVWTCIIKSEAATGEEIDENGXEFFGCAADCRAQFNPPLPPSYFGNALV 324
Query: 314 GMFFSAQPVAAEEEIDLPGLVWALRKAKKEFDKNALEMIN--VEKR----------TWLK 361
G VA ++DL G KE A+E+I + KR +W K
Sbjct: 325 GY------VARTRQVDLAG---------KEGFTIAVELIGEAIRKRXKDEEWILSGSWFK 369
Query: 362 MCGVVDLFARRNDVDYCAYTSWCRFPLYEADFGWGKP 398
VD A+R+ + + LY ADFGWG+P
Sbjct: 370 EYDKVD--AKRS----LSVAGSPKLDLYAADFGWGRP 400
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 24/128 (18%)
Query: 70 LKSSLSKMLTQLYPLAGIIKDHITIECNDEGAEFVEAR--VSCRLCDILKQPD---SVLL 124
LK SLS L PLAG + C + + + E R + I + D + L+
Sbjct: 60 LKDSLSLTLKYYLPLAG------NVACPQDWSGYPELRYVTGNSVSVIFSESDXDFNYLI 113
Query: 125 G----------NFLPVEIE---STAAQSGRLLFVQANLFTCGGLAIGVCISHKIADAATL 171
G +F+P E + Q +L +Q LF G++IG H D AT+
Sbjct: 114 GYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHGISIGFTNHHVAGDGATI 173
Query: 172 GTFINSWA 179
F+ +WA
Sbjct: 174 VKFVRAWA 181
>pdb|2ZBA|A Chain A, Crystal Sructure Of F. Sporotrichioides Tri101 Complexed
With Coenzyme A And T-2
pdb|2ZBA|B Chain B, Crystal Sructure Of F. Sporotrichioides Tri101 Complexed
With Coenzyme A And T-2
pdb|2ZBA|C Chain C, Crystal Sructure Of F. Sporotrichioides Tri101 Complexed
With Coenzyme A And T-2
pdb|2ZBA|D Chain D, Crystal Sructure Of F. Sporotrichioides Tri101 Complexed
With Coenzyme A And T-2
Length = 459
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
Query: 366 VDLFARRNDVDYCAYTSWCRFPLYEADFGW--GKPVWVTLPH-TMLKNVVYLLDTK-DGE 421
V L A N +SW + +E DFG+ GKP V P +++ Y K DGE
Sbjct: 371 VSLTADANPSSSIXLSSWAKVGCWEYDFGFGLGKPESVRRPRFEPFESLXYFXPKKPDGE 430
Query: 422 GIEALVSLTKEDMAEFERQEMLLQFA 447
A +SL ED + E ++A
Sbjct: 431 -FTASISLRDEDXERLKADEEWTKYA 455
>pdb|2RKV|A Chain A, Crystal Sructure Of F. Graminearum Tri101 Complexed With
Coenzyme A And T-2 Mycotoxin
pdb|3B2S|A Chain A, Crystal Sructure Of F. Graminearum Tri101 Complexed With
Coenzyme A And Deoxynivalenol
pdb|3B30|A Chain A, Crystal Sructure Of F. Graminearum Tri101 Complexed With
Ethyl Coenzyme A
Length = 451
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 381 TSWCRFPLYEADF--GWGKPVWVTLP-HTMLKNVVYLLDTK-DGEGIEALVSLTKEDMAE 436
+SW + L++ DF G GKP V P +++++Y + K DGE AL SL EDM
Sbjct: 378 SSWAKVGLWDYDFGLGLGKPETVRRPIFEPVESLMYFMPKKPDGEFCAAL-SLRDEDMDR 436
Query: 437 FERQEMLLQFA 447
+ + ++A
Sbjct: 437 LKADKEWTKYA 447
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.133 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,478,850
Number of Sequences: 62578
Number of extensions: 468277
Number of successful extensions: 861
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 838
Number of HSP's gapped (non-prelim): 15
length of query: 462
length of database: 14,973,337
effective HSP length: 102
effective length of query: 360
effective length of database: 8,590,381
effective search space: 3092537160
effective search space used: 3092537160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)