Query 012483
Match_columns 462
No_of_seqs 140 out of 1208
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 10:19:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012483.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012483hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bgh_A Vinorine synthase; VS, 100.0 5.3E-78 1.8E-82 614.7 35.9 410 6-452 3-420 (421)
2 4g22_A Hydroxycinnamoyl-COA sh 100.0 5.5E-76 1.9E-80 603.0 39.0 401 5-439 5-434 (439)
3 2e1v_A Acyl transferase; BAHD 100.0 1.3E-68 4.6E-73 550.9 37.3 413 1-445 1-448 (454)
4 2xr7_A Malonyltransferase; xen 100.0 5.5E-69 1.9E-73 553.8 33.7 406 8-445 2-448 (453)
5 2rkv_A Trichothecene 3-O-acety 100.0 3.4E-62 1.2E-66 503.1 36.0 392 29-449 5-449 (451)
6 1q9j_A PAPA5, polyketide synth 98.7 2.8E-06 9.4E-11 85.2 24.3 285 27-344 6-314 (422)
7 2jgp_A Tyrocidine synthetase 3 98.1 0.00062 2.1E-08 70.1 24.6 281 27-343 95-400 (520)
8 2xhg_A Tyrocidine synthetase A 98.0 0.0011 3.6E-08 67.2 23.3 289 27-344 16-336 (466)
9 1l5a_A Amide synthase, VIBH; n 98.0 0.00079 2.7E-08 67.5 21.7 253 67-344 35-305 (436)
10 4hvm_A Tlmii; PSI-biology, mid 97.8 0.002 6.9E-08 65.7 21.2 251 67-344 49-328 (493)
11 2vsq_A Surfactin synthetase su 97.5 0.0071 2.4E-07 69.5 23.0 259 67-343 49-327 (1304)
12 3fot_A 15-O-acetyltransferase; 97.4 0.0039 1.3E-07 64.0 16.9 150 154-316 177-361 (519)
13 3cla_A Type III chloramphenico 70.2 3.2 0.00011 36.9 3.7 45 140-184 164-210 (213)
14 2i9d_A Chloramphenicol acetylt 68.6 3.6 0.00012 36.7 3.6 27 155-181 189-215 (217)
15 1q23_A Chloramphenicol acetylt 68.2 3.7 0.00013 36.7 3.6 44 140-184 168-214 (219)
16 3rqc_A Probable lipoamide acyl 65.7 3.9 0.00013 36.7 3.3 32 155-186 187-218 (224)
17 1scz_A E2, dihydrolipoamide su 64.4 5 0.00017 36.2 3.7 30 155-184 196-225 (233)
18 1dpb_A Dihydrolipoyl-transacet 64.3 5 0.00017 36.5 3.7 30 155-184 208-237 (243)
19 3b8k_A PDCE2;, dihydrolipoylly 64.1 4.6 0.00016 36.6 3.5 30 155-184 204-233 (239)
20 2ii3_A Lipoamide acyltransfera 62.6 5.5 0.00019 36.6 3.7 30 155-184 224-253 (262)
21 3mae_A 2-oxoisovalerate dehydr 59.2 6.9 0.00024 35.8 3.7 32 155-186 210-241 (256)
22 3l60_A Branched-chain alpha-ke 57.8 7.6 0.00026 35.4 3.7 30 155-184 205-234 (250)
23 2k1o_A Putative; repressor, tr 53.7 26 0.0009 23.5 4.7 45 231-282 13-57 (66)
24 2xl1_A Arginine attenuator pep 46.3 12 0.0004 20.1 1.7 19 258-276 6-24 (26)
25 1x93_A Hypothetical protein HP 42.0 32 0.0011 22.3 3.6 38 234-278 2-39 (55)
26 3dva_I Dihydrolipoyllysine-res 35.7 7.8 0.00027 38.4 0.0 30 155-184 391-420 (428)
27 4hhu_A OR280; engineered prote 27.6 80 0.0028 24.6 4.5 40 37-89 77-116 (170)
28 4hhu_A OR280; engineered prote 24.7 84 0.0029 24.5 4.1 23 67-89 13-35 (170)
No 1
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=5.3e-78 Score=614.67 Aligned_cols=410 Identities=35% Similarity=0.596 Sum_probs=341.3
Q ss_pred cEEEEEeeeeecCCCCCCCCCCcccCCcCccccccccceEEEEecCCCCCCCCcchhhHHHHHHHHHHHHHHhhhhcccC
Q 012483 6 MKVDVVARETIKPSSPTPKALEDFKLCLMDQSAPAMFTALLFFYPAANDADHDTENKIAEKLRHLKSSLSKMLTQLYPLA 85 (462)
Q Consensus 6 ~~V~~~~~~~V~p~~~~~~~~~~~~LS~lD~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~la 85 (462)
|+|++.++++|+|+.|+|.+.+.++||+||+..++.|++.+|||+.++ ..+.+...++++||+||+++|++|||||
T Consensus 3 m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~----~~~~~~~~~~~~Lk~sLs~~L~~~~plA 78 (421)
T 2bgh_A 3 PQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPL----DSNLDPAQTSQHLKQSLSKVLTHFYPLA 78 (421)
T ss_dssp -CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCS----SCCCCHHHHHHHHHHHHHHHTTTSGGGG
T ss_pred ceEEEeeeEEEeCCCCCCCCCcccCCChHHhcccccccceEEEEeCCC----ccccchhhHHHHHHHHHHHHhhhcchhc
Confidence 789999999999999988765689999999987789999999999764 2111356789999999999999999999
Q ss_pred ccccCCeeEEeCCCCceEEEEEeccchhhhccC-CChhhhhccCCccccccc----cCCCceEEEEEEEEecCcEEEEee
Q 012483 86 GIIKDHITIECNDEGAEFVEARVSCRLCDILKQ-PDSVLLGNFLPVEIESTA----AQSGRLLFVQANLFTCGGLAIGVC 160 (462)
Q Consensus 86 Grl~~~~~i~~~~~gv~f~~a~~d~~~~~l~~~-p~~~~~~~l~p~~~~~~~----~~~~Pll~vQvt~~~cGG~~L~~~ 160 (462)
|||+++++|+|+++||.|++|++|++++++... |+...++.|+|.. .... ..+.|++.+|||+|+|||++||++
T Consensus 79 GRl~~~~~i~c~~~Gv~fv~A~~d~~l~~~~~~~p~~~~~~~l~p~~-~~~~~~~~~~~~pll~vQvt~f~cgG~~lg~~ 157 (421)
T 2bgh_A 79 GRINVNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPSA-AYPGGKIEVNEDVPLAVKISFFECGGTAIGVN 157 (421)
T ss_dssp SEEETTTEEECCCCCEEEEEEEESSCHHHHHSCCSSGGGGGGGSSSC-SSSSSSSCCCTTCSEEEEEEECTTSCEEEEEE
T ss_pred cccCCCcEEEEcCCceEEEEEEEcCCHHHHhccCCChHHHHhcCCCC-CCccccccccCCceEEEEEEEEcCCCEEEEEE
Confidence 999988999999999999999999999999765 6655677888866 2222 456899999999999999999999
Q ss_pred ecccccchhcHHHHHHHHHHHHhcCCCCCCCCCccCCCCCCCCCCCCCCCcc-ccCCCC-CCCCCCCcccCCCCceEEEE
Q 012483 161 ISHKIADAATLGTFINSWATAAAAADPHHHHHHHHHHHRPTHESPASPLFMA-SSLFPP-SDTQIPTMRLIPDKYATKRY 238 (462)
Q Consensus 161 ~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~~~~~~~~~~~~~~~~~~P~~~~-~~~~p~-~~~p~~~~~~~~~~~~~~~f 238 (462)
+||.++||.|+.+|+++||+....... . ..|.+++ ..+.|+ ++.|. ..+....++..++|
T Consensus 158 ~~H~v~Dg~~~~~fl~~wa~~~rg~~~----------------~-~~P~~dr~~~l~p~~~~~~~-~~~~~~~~~~~~~f 219 (421)
T 2bgh_A 158 LSHKIADVLSLATFLNAWTATCRGETE----------------I-VLPNFDLAARHFPPVDNTPS-PELVPDENVVMKRF 219 (421)
T ss_dssp EETTTCCHHHHHHHHHHHHHHHTTCSC----------------C-CCCBCSHHHHHSCCCTTCCC-CCCCCCSSEEEEEE
T ss_pred eeEEechHHHHHHHHHHHHHHhcCCCC----------------C-CCCccccccccCCCcccCCC-CccCCccceEEEEE
Confidence 999999999999999999998764321 1 4578887 655555 44433 12223457899999
Q ss_pred EecHHHHHHHHHHHhccCC-CCCChHHHHHHHHHHHHHHhhcCCCCCCceeEEEEEecCccccCCCCCCCccccchhhhc
Q 012483 239 VFNTSNLAALKAKAASASV-QQPTRVESVTALMWKCMINVTRSNKGLKKLSLVSHSVDLRKRVVPPLPENTIGNIVGMFF 317 (462)
Q Consensus 239 ~fs~~~l~~Lk~~a~~~~~-~~~St~dal~AllW~~i~~Ar~~~~~~~~~~~l~~~vd~R~r~~pplp~~Y~GN~v~~~~ 317 (462)
+|++++|++||+++.++.. .++|+||+|+|++|||+++||+...++++++.+.++||+|+|++||+|++||||++..+
T Consensus 220 ~f~~~~i~~LK~~a~~~~~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~y~GN~~~~~- 298 (421)
T 2bgh_A 220 VFDKEKIGALRAQASSASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMGNIATLL- 298 (421)
T ss_dssp EECHHHHHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGGSSSCCCTTBCSCCEEEE-
T ss_pred EECHHHHHHHHHHhhccCCCCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCccccCCCCCCCccceEEEEE-
Confidence 9999999999999976543 68999999999999999999865433356899999999999999999999999999988
Q ss_pred ccccccccccCChHHHHHHHHHHHHHhhHHHHHHhhhhhhhhhhhhchhccccccCCCCeEEeeecCCCCCCccccCCCc
Q 012483 318 SAQPVAAEEEIDLPGLVWALRKAKKEFDKNALEMINVEKRTWLKMCGVVDLFARRNDVDYCAYTSWCRFPLYEADFGWGK 397 (462)
Q Consensus 318 ~~~~~~~~~~~~L~~~A~~IR~ai~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~tsW~~~~~y~~DFG~G~ 397 (462)
.+..++++ +.+|+++|.+||+++.++++++++.+.+ |.+.. ... ...+.+.+|||.++++|++|||||+
T Consensus 299 ~~~~~~~~-~~~l~~~a~~ir~ai~~~~~~~~~~~~~----~~~~~----~~~--~~~~~~~vssw~~~~~y~~DFGwGk 367 (421)
T 2bgh_A 299 FAAVDAEW-DKDFPDLIGPLRTSLEKTEDDHNHELLK----GMTCL----YEL--EPQELLSFTSWCRLGFYDLDFGWGK 367 (421)
T ss_dssp EEEECTTC-CCCGGGGHHHHHHHTCCCSSCHHHHHHH----HHHHH----HTS--CGGGEEEEEEETTSCGGGCCSSSCC
T ss_pred EEEecccc-cccHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHh----hcc--CCCCeEEEeccccCCCcccccCCCc
Confidence 66666654 7899999999999999998888886654 23211 111 1124589999999999999999999
Q ss_pred ceeeecCccccCcEEEEeeCCCCCcEEEEEecCHHHHHHHhcChhhhhcccCCCC
Q 012483 398 PVWVTLPHTMLKNVVYLLDTKDGEGIEALVSLTKEDMAEFERQEMLLQFADVNPS 452 (462)
Q Consensus 398 P~~v~~~~~~~~g~v~i~p~~~~~g~ev~v~L~~~~m~~l~~D~~~~~~~~~~~~ 452 (462)
|+++++...+.+|+++++|+++++|++|.|+|++++|++|++ ||.+|+++||+
T Consensus 368 P~~v~~~~~~~~g~~~~~p~~~~~gi~v~v~L~~~~m~~f~~--e~~~~~~~~~~ 420 (421)
T 2bgh_A 368 PLSACTTTFPKRNAALLMDTRSGDGVEAWLPMAEDEMAMLPV--ELLSLVDSDFS 420 (421)
T ss_dssp CSEEECCCCCSTTEEEEEECTTSSSEEEEEEEEHHHHHHSCH--HHHTTBCCCCC
T ss_pred cCeecccccCcCCEEEEEecCCCCeEEEEEEcCHHHHHHHHH--HHHHhhcCCCC
Confidence 999998776678999999999888999999999999999998 99999999996
No 2
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=5.5e-76 Score=602.99 Aligned_cols=401 Identities=25% Similarity=0.400 Sum_probs=325.1
Q ss_pred ccEEEEEeeeeecCCCCCCCCCCcccCCcCccccccccceEEEEecCCCCCCCCcchhhHHHHHHHHHHHHHHhhhhccc
Q 012483 5 VMKVDVVARETIKPSSPTPKALEDFKLCLMDQSAPAMFTALLFFYPAANDADHDTENKIAEKLRHLKSSLSKMLTQLYPL 84 (462)
Q Consensus 5 ~~~V~~~~~~~V~p~~~~~~~~~~~~LS~lD~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~l 84 (462)
+|+|++.++++|+|+.|+|. +.++||+||+.+++.|++.+|||+.++ . +....+++||+||+++|++||||
T Consensus 5 ~~~V~i~~~~~V~P~~~tp~--~~~~LS~lD~~~~~~~~~~~~~y~~~~----~---~~~~~~~~Lk~sLs~~L~~f~pl 75 (439)
T 4g22_A 5 SMKIEVKESTMVRPAQETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTG----S---SNFFDAKVLKDALSRALVPFYPM 75 (439)
T ss_dssp -CCEEEEEEEEECCSSCCCC--CEECCCHHHHSCCTTCCCEEEEECCCS----C---TTTTCHHHHHHHHHHHTTTTGGG
T ss_pred ceEEEEeeeEEEeCCCCCCC--CeecCChhHhCccccceeeEEEEcCCC----C---ccccHHHHHHHHHHHHHhhcccc
Confidence 47899999999999999876 469999999998899999999999754 2 11235899999999999999999
Q ss_pred Ccccc----CCeeEEeCCCCceEEEEEeccchhhhccCCChhhhhccCCccccccccCCCceEEEEEEEEecCcEEEEee
Q 012483 85 AGIIK----DHITIECNDEGAEFVEARVSCRLCDILKQPDSVLLGNFLPVEIESTAAQSGRLLFVQANLFTCGGLAIGVC 160 (462)
Q Consensus 85 aGrl~----~~~~i~~~~~gv~f~~a~~d~~~~~l~~~p~~~~~~~l~p~~~~~~~~~~~Pll~vQvt~~~cGG~~L~~~ 160 (462)
||||+ ++++|+|+++||.|+||++|++++|+........++.|+|..+...+..+.|++.+|||+|+|||++||++
T Consensus 76 AGRl~~~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p~~~~~~l~p~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~ 155 (439)
T 4g22_A 76 AGRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPAVDYSQGISSYALLVLQVTYFKCGGVSLGVG 155 (439)
T ss_dssp GCEEEECTTSCEEEECCCCCEEEEEEEESSCGGGGTTCCCCGGGGGGSCCCCTTSCTTSSCSEEEEEEECTTSCEEEEEE
T ss_pred ceeeeeCCCCCEEEEECCCCCEEEEEEcCCcHHHhcCCCCCHHHHhcCCCCCcccccccCceeEEEEEEecCCCEEEEEE
Confidence 99997 47999999999999999999999999653222356678886543333467899999999999999999999
Q ss_pred ecccccchhcHHHHHHHHHHHHhcCCCCCCCCCccCCCCCCCCCCCCCCCccccCCCCCCCCCC-------C-------c
Q 012483 161 ISHKIADAATLGTFINSWATAAAAADPHHHHHHHHHHHRPTHESPASPLFMASSLFPPSDTQIP-------T-------M 226 (462)
Q Consensus 161 ~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~p~~~~p~~-------~-------~ 226 (462)
+||.++||.|+.+|+++||+....... ...|.+||..+. +++.|.. . .
T Consensus 156 ~~H~v~Dg~~~~~Fl~~wa~~~rg~~~-----------------~~~P~~dr~~l~-~~~pp~~~~~~~~~~~~~~~~~~ 217 (439)
T 4g22_A 156 MRHHAADGFSGLHFINSWSDMARGLDV-----------------TLPPFIDRTLLR-ARDPPQPQFQHIEYQPPPALAVS 217 (439)
T ss_dssp ECTTTCCHHHHHHHHHHHHHHHTTCCC-----------------SSCCBCCGGGGC-CCSSCCCSSCCGGGSCCC-----
T ss_pred eeeccCcHHHHHHHHHHHHHHhCCCCC-----------------CCCCcccccccc-CCCCCCCCcCcccccCCCCCccc
Confidence 999999999999999999999865321 234666664332 1111100 0 0
Q ss_pred c----cCC-CCceEEEEEecHHHHHHHHHHHhccC-CCCCChHHHHHHHHHHHHHHhhcCCCCCCceeEEEEEecCcccc
Q 012483 227 R----LIP-DKYATKRYVFNTSNLAALKAKAASAS-VQQPTRVESVTALMWKCMINVTRSNKGLKKLSLVSHSVDLRKRV 300 (462)
Q Consensus 227 ~----~~~-~~~~~~~f~fs~~~l~~Lk~~a~~~~-~~~~St~dal~AllW~~i~~Ar~~~~~~~~~~~l~~~vd~R~r~ 300 (462)
. ... .++..++|+|++++|++||+++..+. ..++|+||+|+||+|||+++||+..+ ++.+.+.++||+|+|+
T Consensus 218 ~~~~~~~~~~~~~~~~f~fs~~~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rAr~~~~--~~~~~l~~~vd~R~rl 295 (439)
T 4g22_A 218 PQTAASDSVPETAVSIFKLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEV--DQGTKLYIATDGRARL 295 (439)
T ss_dssp ----------CEEEEEEEECHHHHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHHTTCCT--TCEEEEEEEEECTTTS
T ss_pred ccccccCCcccceEEEEEECHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHhcCCCC--CCcEEEEEEEcccCCC
Confidence 0 111 56899999999999999999998653 46899999999999999999987643 5789999999999999
Q ss_pred CCCCCCCccccchhhhccccccccc-ccCChHHHHHHHHHHHHHhhHHHHHHhhhhhhhhhhhhchhc---cccccCCCC
Q 012483 301 VPPLPENTIGNIVGMFFSAQPVAAE-EEIDLPGLVWALRKAKKEFDKNALEMINVEKRTWLKMCGVVD---LFARRNDVD 376 (462)
Q Consensus 301 ~pplp~~Y~GN~v~~~~~~~~~~~~-~~~~L~~~A~~IR~ai~~~~~~~~~~~~~~~~~w~~~~~~~~---~~~~~~~~~ 376 (462)
+||+|++||||++..+ .+..++++ .+++|+++|.+||+++.+++++|+++.++ |++..++.. ......+..
T Consensus 296 ~Pplp~~Y~GN~v~~~-~~~~~~~el~~~~L~~~A~~Ir~ai~~~~~e~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 370 (439)
T 4g22_A 296 RPSLPPGYFGNVIFTA-TPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALD----YLELQPDLKALVRGAHTFKCP 370 (439)
T ss_dssp SSCCCTTBCSCCEEEE-CCEEEHHHHHHSCHHHHHHHHHHHHHTCSHHHHHHHHH----HHHTCSCSTTCCCCHHHHCTT
T ss_pred CCCCCCCcccceeehh-hcceEHHHHhhCcHHHHHHHHHHHHHhhCHHHHHHHHH----HHHhCccchhhcccCCcCcCC
Confidence 9999999999999988 77777766 67899999999999999999999999887 565432110 111111123
Q ss_pred eEEeeecCCCCCCccccCCCcceeeecCccccCcEEEEeeCCCC-CcEEEEEecCHHHHHHHhc
Q 012483 377 YCAYTSWCRFPLYEADFGWGKPVWVTLPHTMLKNVVYLLDTKDG-EGIEALVSLTKEDMAEFER 439 (462)
Q Consensus 377 ~~~~tsW~~~~~y~~DFG~G~P~~v~~~~~~~~g~v~i~p~~~~-~g~ev~v~L~~~~m~~l~~ 439 (462)
.+.+|||.+|++|++|||||+|+++++...+.+|.++++|++++ ||++|.|+|++++|++|++
T Consensus 371 ~~~vssw~r~~~y~~DFGwGkP~~~~~~~~~~~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~ 434 (439)
T 4g22_A 371 NLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQGEHMKLFQS 434 (439)
T ss_dssp CEEEEECTTSCTTCCCCSSCCCSEEEESSCCSTTEEEEEECTTCSSCEEEEEEEEHHHHHHHHH
T ss_pred cEEEeecCcCCccccccCCCCcceeeccccCCCcEEEEeecCCCCCcEEEEEECCHHHHHHHHH
Confidence 48999999999999999999999999876667899999998754 4799999999999999987
No 3
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=1.3e-68 Score=550.88 Aligned_cols=413 Identities=19% Similarity=0.290 Sum_probs=313.9
Q ss_pred CCCcccEEEEEeeeeecCCCCCCCCCCcccCCcCccccc-cccceEEEEecCCCCCCCCcchhhHHHHHHHHHHHHHHhh
Q 012483 1 MAESVMKVDVVARETIKPSSPTPKALEDFKLCLMDQSAP-AMFTALLFFYPAANDADHDTENKIAEKLRHLKSSLSKMLT 79 (462)
Q Consensus 1 ~~~~~~~V~~~~~~~V~p~~~~~~~~~~~~LS~lD~~~~-~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~Lk~sL~~~L~ 79 (462)
|+ +..+|+|.++++|+|+.++++. +.++||+||+.+. ..|++.+|||+.++ ......+.++++||+||+++|+
T Consensus 1 ~~-~~~~v~v~~~~~V~P~~~~~~~-~~~~LS~lD~~~~~~~~~~~~~~y~~~~----~~~~~~~~~~~~Lk~sLs~~L~ 74 (454)
T 2e1v_A 1 MA-SLPILTVLEQSQVSPPPDTLGD-KSLQLTFFDFFWLRSPPINNLFFYELPI----TRSQFTETVVPNIKHSLSITLK 74 (454)
T ss_dssp ------CEEEEEEEEECCCTTSCCC-EEEECCHHHHTTTTCCCEEEEEEEECCC----CHHHHHHTHHHHHHHHHHHHHT
T ss_pred CC-CCceEEEEEEEEEeCCCCCCCC-ceecCchHHhhhhccCCccEEEEEeCCC----CcchhhHHHHHHHHHHHHHHhh
Confidence 55 4467999999999999874432 6799999999855 46999999999764 2100145679999999999999
Q ss_pred hhcccCcccc--C----CeeEEeC-CCCceEEEEEeccchhhhccC-C-ChhhhhccCCcccccc---ccCCCceEEEEE
Q 012483 80 QLYPLAGIIK--D----HITIECN-DEGAEFVEARVSCRLCDILKQ-P-DSVLLGNFLPVEIEST---AAQSGRLLFVQA 147 (462)
Q Consensus 80 ~~p~laGrl~--~----~~~i~~~-~~gv~f~~a~~d~~~~~l~~~-p-~~~~~~~l~p~~~~~~---~~~~~Pll~vQv 147 (462)
+||||||||+ + +++|+|+ ++||.|++|++|.+++++... + ....++.|+|..+... +..+.|++++||
T Consensus 75 ~~~plAGRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQv 154 (454)
T 2e1v_A 75 HFYPFVGKLVVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQV 154 (454)
T ss_dssp TCGGGGSEEEECSSSSSCCEEEECTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEE
T ss_pred hccccceeeeeccCCCCCEEEEECCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEE
Confidence 9999999997 2 6899999 599999999999999998653 2 2335567888654221 123459999999
Q ss_pred EEEecCcEEEEeeecccccchhcHHHHHHHHHHHHh-cCCCCCCCCCccCCCCCCCCCCCCCCCccccCCCCC-------
Q 012483 148 NLFTCGGLAIGVCISHKIADAATLGTFINSWATAAA-AADPHHHHHHHHHHHRPTHESPASPLFMASSLFPPS------- 219 (462)
Q Consensus 148 t~~~cGG~~L~~~~~H~v~Dg~~~~~fl~~wa~~~r-g~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~p~~------- 219 (462)
|+|+|||++||+++||+++||.|+.+|+++||+... ........ .....|.+|| .+..|.
T Consensus 155 T~f~cgG~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~~-----------~~~~~P~~dr-~l~~p~~~~~~~~ 222 (454)
T 2e1v_A 155 TLFPNQGIAIGITNHHCLGDASTRFCFLKAWTSIARSGNNDESFL-----------ANGTRPLYDR-IIKYPMLDEAYLK 222 (454)
T ss_dssp EEETTTEEEEEEEECGGGCCHHHHHHHHHHHHHHHHTTSCCHHHH-----------HHSCCCBCCC-CCCCHHHHHHHHH
T ss_pred EEecCCcEEEEEEeeeeecchhHHHHHHHHHHHHhccCCCccccC-----------CCCCCCcccc-cCCCCCcchHHHH
Confidence 999999999999999999999999999999999887 32100000 0012455555 321110
Q ss_pred CCCC--------CCcccCCCCceEEEEEecHHHHHHHHHHHhccCC--CCCChHHHHHHHHHHHHHHhhcCCCCCCceeE
Q 012483 220 DTQI--------PTMRLIPDKYATKRYVFNTSNLAALKAKAASASV--QQPTRVESVTALMWKCMINVTRSNKGLKKLSL 289 (462)
Q Consensus 220 ~~p~--------~~~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~--~~~St~dal~AllW~~i~~Ar~~~~~~~~~~~ 289 (462)
.... ........+...++|+|++++|++||+++.++.. .++|+||+|+|++|||+++|| + ++.+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar---~--~~~~~ 297 (454)
T 2e1v_A 223 RAKVESFNEDYVTQSLAGPSDKLRATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR---N--DKLQL 297 (454)
T ss_dssp HTTCTTHHHHCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH---C--CSEEE
T ss_pred hhhccccccccCcccCCCCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhc---C--CCceE
Confidence 0000 0000023467899999999999999999986543 689999999999999999998 2 46899
Q ss_pred EEEEecCccccCCCCCCCccccchhhhccccccccc-c-cCChHHHHHHHHHHHHHhhHHHHHHhhhh-hhhhhhhhchh
Q 012483 290 VSHSVDLRKRVVPPLPENTIGNIVGMFFSAQPVAAE-E-EIDLPGLVWALRKAKKEFDKNALEMINVE-KRTWLKMCGVV 366 (462)
Q Consensus 290 l~~~vd~R~r~~pplp~~Y~GN~v~~~~~~~~~~~~-~-~~~L~~~A~~IR~ai~~~~~~~~~~~~~~-~~~w~~~~~~~ 366 (462)
+.++||+|+|++||+|.+||||++..+ .+..++++ . +++|+++|.+||+++.+++++|++..+.. ...|++..
T Consensus 298 l~~~vd~R~rl~pplP~~Y~GN~~~~~-~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~~~~~~~~~~--- 373 (454)
T 2e1v_A 298 FGFPIDRRARMKPPIPTAYFGNCVGGC-AAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDDMESFNDLV--- 373 (454)
T ss_dssp EEEEEECGGGSSSCCCTTBCSCCEEEE-EEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-----CHHH---
T ss_pred EEEEecchhccCCCCCcccccceeeeE-EeecchhhccccccHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH---
Confidence 999999999999999999999999988 77777766 4 47999999999999999987776665432 11233321
Q ss_pred ccccccCCCCeEEeeecCCCCCCccccCCCcceeeecCccccCcEEEEeeCCCCC-cEEEEEecCHHHHHHHhcChhhhh
Q 012483 367 DLFARRNDVDYCAYTSWCRFPLYEADFGWGKPVWVTLPHTMLKNVVYLLDTKDGE-GIEALVSLTKEDMAEFERQEMLLQ 445 (462)
Q Consensus 367 ~~~~~~~~~~~~~~tsW~~~~~y~~DFG~G~P~~v~~~~~~~~g~v~i~p~~~~~-g~ev~v~L~~~~m~~l~~D~~~~~ 445 (462)
..+ .+...+.+|||.+|++|++|||||+|+++++...+.+|+++++|+++++ |++|.|+|++++|++|++ +|.+
T Consensus 374 -~~~--~~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f~~--~~~~ 448 (454)
T 2e1v_A 374 -SEG--MPTTMTWVSGTPKLRFYDMDFGWGKPKKLETVSIDHNGAISINSCKESNEDLEIGVCISATQMEDFVH--IFDD 448 (454)
T ss_dssp -HHC--CCSEEEEEECCTTSCGGGCCSSSCSCSEEEEGGGGGSSEEEEEECSSCTTSEEEEEEEEHHHHHHHHH--HHHH
T ss_pred -Hhh--cCCceEEEecCCCCCcccccccCccceEEEeeeeCCCCeEEEEecCCCCCCEEEEEEECHHHHHHHHH--HHHH
Confidence 112 1222599999999999999999999999998766667999999987754 799999999999999965 5543
No 4
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=5.5e-69 Score=553.81 Aligned_cols=406 Identities=20% Similarity=0.314 Sum_probs=316.7
Q ss_pred EEEEeeeeecCCCCCCCCCCcccCCcCccccc-cccceEEEEecCCCCCCCCcchhhHHHHHHHHHHHHHHhhhhcccCc
Q 012483 8 VDVVARETIKPSSPTPKALEDFKLCLMDQSAP-AMFTALLFFYPAANDADHDTENKIAEKLRHLKSSLSKMLTQLYPLAG 86 (462)
Q Consensus 8 V~~~~~~~V~p~~~~~~~~~~~~LS~lD~~~~-~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~laG 86 (462)
|+|.++++|+|+.++++. +.++||+||+.+. ..|++.+|||+.++ ......+.++++||+||+++|++||||||
T Consensus 2 v~v~~~~~V~P~~~~~~~-~~~~LS~lD~~~~~~~~~~~~~~y~~~~----~~~~~~~~~~~~Lk~sLs~~L~~~~plAG 76 (453)
T 2xr7_A 2 ASVIEQCQVVPSPGSATE-LTLPLTYFDHVWLAFHRMRRILFYKLPI----SRPDFVQTIIPTLKDSLSLTLKYYLPLAG 76 (453)
T ss_dssp CEEEEESCCCCCTTCCSE-EEEECCHHHHGGGGSCCEEEEEEEECCC----CSHHHHHTHHHHHHHHHHHHHTTSGGGGS
T ss_pred eEEEEEEEecCCCCCCCC-ceECCCHHHhhhhhcCCccEEEEEeCCC----CCchhHHHHHHHHHHHHHHHhhhccccCe
Confidence 899999999999874432 6799999999855 46999999999764 21011456799999999999999999999
Q ss_pred ccc------CCeeEEeC-CCCceEEEEEeccchhhhccC--CChhhhhccCCccccccc---cCCCceEEEEEEEEecCc
Q 012483 87 IIK------DHITIECN-DEGAEFVEARVSCRLCDILKQ--PDSVLLGNFLPVEIESTA---AQSGRLLFVQANLFTCGG 154 (462)
Q Consensus 87 rl~------~~~~i~~~-~~gv~f~~a~~d~~~~~l~~~--p~~~~~~~l~p~~~~~~~---~~~~Pll~vQvt~~~cGG 154 (462)
||+ ++++|+|+ ++||.|++|++|.+++++... +....++.|+|..+.... ..+.|++++|||+|+|||
T Consensus 77 Rl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cGG 156 (453)
T 2xr7_A 77 NVACPQDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHG 156 (453)
T ss_dssp CCEEESSTTCCCEEEEETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEEETTTE
T ss_pred eEEccCCCCCCEEEEecCCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEEccCCc
Confidence 995 36899999 599999999999999998652 234456678886542111 122899999999999999
Q ss_pred EEEEeeecccccchhcHHHHHHHHHHHHh-cCCCCCCCCCccCCCCCCCCCCCCCCCccccCCCCCCC-----CCC---C
Q 012483 155 LAIGVCISHKIADAATLGTFINSWATAAA-AADPHHHHHHHHHHHRPTHESPASPLFMASSLFPPSDT-----QIP---T 225 (462)
Q Consensus 155 ~~L~~~~~H~v~Dg~~~~~fl~~wa~~~r-g~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~p~~~~-----p~~---~ 225 (462)
++||+++||+++||.|+.+|+++||+... ....... .....|.+||..+.+|..+ ... .
T Consensus 157 ~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~~~------------~~~~~P~~dr~~l~~p~~~~~~~~~~~~~~~ 224 (453)
T 2xr7_A 157 ISIGFTNHHVAGDGATIVKFVRAWALLNKFGGDEQFL------------ANEFIPFYDRSVIKDPNGVGMSIWNEMKKYK 224 (453)
T ss_dssp EEEEEEECTTTCCSHHHHHHHHHHHHHHHTTTCGGGS------------CGGGSCBCCCSSSCCSSCHHHHTTTTGGGCT
T ss_pred EEEEEeeeeeeechhHHHHHHHHHHHHhhcCCCcccC------------CCCCCCccccccccCCCCcchHHHHhccccC
Confidence 99999999999999999999999999877 3210000 0112466666544433211 000 0
Q ss_pred c--c----cCCCCceEEEEEecHHHHHHHHHHHhccCC--CCCChHHHHHHHHHHHHHHhhcCC--C-CCCceeEEEEEe
Q 012483 226 M--R----LIPDKYATKRYVFNTSNLAALKAKAASASV--QQPTRVESVTALMWKCMINVTRSN--K-GLKKLSLVSHSV 294 (462)
Q Consensus 226 ~--~----~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~--~~~St~dal~AllW~~i~~Ar~~~--~-~~~~~~~l~~~v 294 (462)
. . ....++..++|+|++++|++||+++.++.. .++|+||+|+|++|||+++||... . ++++++.+.++|
T Consensus 225 ~~~~~~~~~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~v 304 (453)
T 2xr7_A 225 HMMKMSDVVTPPDKVRGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAA 304 (453)
T ss_dssp TTSCCSCCCCCCSCCCEEEEECHHHHHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEEC
T ss_pred CccccccccCCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEe
Confidence 0 0 123467799999999999999999986543 689999999999999999998752 0 235689999999
Q ss_pred cCccccCCCCCCCccccchhhhccccccccc-c-cCChHHHHHHHHHHHHH--hhHH-HHHHhhhhhhhhhhhhchhccc
Q 012483 295 DLRKRVVPPLPENTIGNIVGMFFSAQPVAAE-E-EIDLPGLVWALRKAKKE--FDKN-ALEMINVEKRTWLKMCGVVDLF 369 (462)
Q Consensus 295 d~R~r~~pplp~~Y~GN~v~~~~~~~~~~~~-~-~~~L~~~A~~IR~ai~~--~~~~-~~~~~~~~~~~w~~~~~~~~~~ 369 (462)
|+|+|++||+|.+||||++..+ .+..++++ . +++|+++|.+||+++.+ ++++ ++++ + |++... .
T Consensus 305 d~R~rl~pplP~~Y~GN~~~~~-~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~--~----~~~~~~----~ 373 (453)
T 2xr7_A 305 DCRAQFNPPLPPSYFGNALVGY-VARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG--S----WFKEYD----K 373 (453)
T ss_dssp CTTSCSSSCCCTTBCSCCCCEE-EEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS--C----TTSCCC----C
T ss_pred cccccCCCCCCcccccceeeee-eeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhh--H----HHHHHH----h
Confidence 9999999999999999999988 77666666 4 48999999999999999 5777 8886 4 454221 1
Q ss_pred cccCCCCeEEeeecCCCCCCccccCCCcceeeecCccccCc--EEEEeeCCCCC-cEEEEEecCHHHHHHHhcChhhhh
Q 012483 370 ARRNDVDYCAYTSWCRFPLYEADFGWGKPVWVTLPHTMLKN--VVYLLDTKDGE-GIEALVSLTKEDMAEFERQEMLLQ 445 (462)
Q Consensus 370 ~~~~~~~~~~~tsW~~~~~y~~DFG~G~P~~v~~~~~~~~g--~v~i~p~~~~~-g~ev~v~L~~~~m~~l~~D~~~~~ 445 (462)
+. +...+.+|||++|++|++|||||+|+++++...+.+| +++++|+++++ |++|.|+|++++|++|++ +|.+
T Consensus 374 ~~--~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~~f~~--~~~~ 448 (453)
T 2xr7_A 374 VD--AKRSLSVAGSPKLDLYAADFGWGRPEKLEFVSIDNDDGISMSLSKSKDSDGDLEIGLSLSKTRMNAFAA--MFTH 448 (453)
T ss_dssp SC--GGGEEEECSCSSCCGGGCCCSSCSCSEEEEGGGSSCSSCEEEEEECSSSTTCEEEEECCCHHHHHHHHH--HHHH
T ss_pred hc--cCCcEEEeccccCCccccccCCCcceEEEeeeecCCCceEEEEeecCCCCCCEEEEEEeCHHHHHHHHH--HHHH
Confidence 21 1235899999999999999999999999987666678 88889887654 799999999999999965 5544
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=3.4e-62 Score=503.12 Aligned_cols=392 Identities=18% Similarity=0.234 Sum_probs=292.8
Q ss_pred ccCCcCcccc--ccccceEEEEecCCCCCCCCcchhhHHHHHHHHHHHHHHhhhhcccCcccc---------CCeeEEeC
Q 012483 29 FKLCLMDQSA--PAMFTALLFFYPAANDADHDTENKIAEKLRHLKSSLSKMLTQLYPLAGIIK---------DHITIECN 97 (462)
Q Consensus 29 ~~LS~lD~~~--~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~laGrl~---------~~~~i~~~ 97 (462)
++||.|||+. ++.|++.+|||+.++ . .+.+.++++||+||+++|++||||||||+ ++++|.|+
T Consensus 5 ~~Ls~lD~~~~~~~~y~~~~~~y~~~~----~--~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~ 78 (451)
T 2rkv_A 5 IQLDTLGQLPGLLSIYTQISLLYPVSD----S--SQYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPF 78 (451)
T ss_dssp EECCGGGGCTTGGGCEEEEEEEEECSC----G--GGHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECC
T ss_pred ccCChhhcCccccccceeEEEEEECCC----C--CCHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeec
Confidence 6899999997 689999999999654 2 13567899999999999999999999996 14788887
Q ss_pred CCCceEEEEEecc-----chhhhcc--CCChhhhh--ccCCccccc-----cccCCCceEEEEEEEEecCcEEEEeeecc
Q 012483 98 DEGAEFVEARVSC-----RLCDILK--QPDSVLLG--NFLPVEIES-----TAAQSGRLLFVQANLFTCGGLAIGVCISH 163 (462)
Q Consensus 98 ~~gv~f~~a~~d~-----~~~~l~~--~p~~~~~~--~l~p~~~~~-----~~~~~~Pll~vQvt~~~cGG~~L~~~~~H 163 (462)
+.+..|++++++. +++++.. .|. ..+. .+.|..... ....+.|++.+|||+| |||++||+++||
T Consensus 79 ~~~~~~~va~~~~d~~~p~~~~l~~~~~p~-~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~~-~GG~~lg~~~~H 156 (451)
T 2rkv_A 79 EDVPRVVVKDLRDDPSAPTIEGMRKAGYPM-AMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFI-KGGLILTVNGQH 156 (451)
T ss_dssp CSSCEEEEEECTTCTTSCBHHHHHHHTSCG-GGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEEE-BTEEEEEEEEET
T ss_pred CCCCeEEEEeCCCCCCCCCHHHHHHcCCCh-hhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEEe-cCceeeeeeehh
Confidence 7666699988864 5777653 222 1111 233322110 1234589999999965 799999999999
Q ss_pred cccchhcHHHHHHHHHHHHhcCCCCCCCCCccCCCCCCCCCCCCCCCccccCCCC------C---CCCCCC-------cc
Q 012483 164 KIADAATLGTFINSWATAAAAADPHHHHHHHHHHHRPTHESPASPLFMASSLFPP------S---DTQIPT-------MR 227 (462)
Q Consensus 164 ~v~Dg~~~~~fl~~wa~~~rg~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~p~------~---~~p~~~-------~~ 227 (462)
+++||.|+.+|+++||+.......... ....|.++|..+.|. . +.+... ..
T Consensus 157 ~v~Dg~g~~~Fl~awa~~~rg~~~~~~-------------~~~~p~~dr~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~ 223 (451)
T 2rkv_A 157 GAMDMVGQDAVIRLLSKACRNDPFTEE-------------EMTAMNLDRKTIVPYLENYTIGPEVDHQIVKADVAGGDAV 223 (451)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCCCHH-------------HHHHTTCCSTTSSCCCTTCCCCGGGTTCBCCTTSCC----
T ss_pred ccccHHHHHHHHHHHHHHhcCCCCCcc-------------ccccccCchhhccccccccCCCccccccccCCCCCCCCCC
Confidence 999999999999999998775321000 000223333221111 0 000000 01
Q ss_pred cCCCCceEEEEEecHHHHHHHHHHHhccC---CCCCChHHHHHHHHHHHHHHhhcCCCCCCceeEEEEEecCccccCCCC
Q 012483 228 LIPDKYATKRYVFNTSNLAALKAKAASAS---VQQPTRVESVTALMWKCMINVTRSNKGLKKLSLVSHSVDLRKRVVPPL 304 (462)
Q Consensus 228 ~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~---~~~~St~dal~AllW~~i~~Ar~~~~~~~~~~~l~~~vd~R~r~~ppl 304 (462)
....++..++|+|++++|++||+++.++. +.++|+||+|+|++|||+++||....++++++.+.++||+|+|++ +
T Consensus 224 ~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~--l 301 (451)
T 2rkv_A 224 LTPVSASWAFFTFSPKAMSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMG--V 301 (451)
T ss_dssp ---CCEEEEEEEECHHHHHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEEECHHHHT--C
T ss_pred CCCCCceEEEEEECHHHHHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEecccccCC--C
Confidence 12356789999999999999999998653 367999999999999999999822112357899999999999998 8
Q ss_pred CCCccccchhhhccccccccc-ccCChHHHHHHHHHHHHHhhHHH-HHHhhhhhhhhhhhhchhc-cccc---cCCCCeE
Q 012483 305 PENTIGNIVGMFFSAQPVAAE-EEIDLPGLVWALRKAKKEFDKNA-LEMINVEKRTWLKMCGVVD-LFAR---RNDVDYC 378 (462)
Q Consensus 305 p~~Y~GN~v~~~~~~~~~~~~-~~~~L~~~A~~IR~ai~~~~~~~-~~~~~~~~~~w~~~~~~~~-~~~~---~~~~~~~ 378 (462)
|.+||||++..+ .+..++++ .+.+|+++|.+||+++.+++.++ ++++++ |++...+.. ..+. ..+.+ +
T Consensus 302 P~~y~GN~~~~~-~~~~~~~el~~~~L~~~a~~ir~ai~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~ 375 (451)
T 2rkv_A 302 SNNYPGLLQNMT-YHNSTIGEIANESLGATASRLRSELDPASMRQRTRGLAT----YLHNNPDKSNVSLTADADPSTS-V 375 (451)
T ss_dssp CTTCCSCCEEEE-EEEEEHHHHHHSCHHHHHHHHHTTCCHHHHHHHHHHHHH----HHHHCSCCTTBCTTTTCCTTTC-E
T ss_pred CCCCcccceeee-cccCcHHHhccchHHHHHHHHHHHhcccCchhHHHHHHH----HHhcCCCccccccccccCCCCC-E
Confidence 999999999988 66666666 68899999999999999998888 988876 465432111 1111 11234 9
Q ss_pred EeeecCCCCCCccccC--CCcceeeecCcc-ccCcEEEEeeCCCCCcEEEEEecCHHHHHHHhcChhhhhcccC
Q 012483 379 AYTSWCRFPLYEADFG--WGKPVWVTLPHT-MLKNVVYLLDTKDGEGIEALVSLTKEDMAEFERQEMLLQFADV 449 (462)
Q Consensus 379 ~~tsW~~~~~y~~DFG--~G~P~~v~~~~~-~~~g~v~i~p~~~~~g~ev~v~L~~~~m~~l~~D~~~~~~~~~ 449 (462)
++|||+++++|++||| ||+|++++.+.. +.+|+++++|.+.++|++|.|+|++++|++|++|+||++|++.
T Consensus 376 ~~ssw~~~~~y~~DFG~gwG~P~~v~~~~~~~~~g~~~~~p~~~~ggi~v~v~L~~~~m~~f~~d~ef~~~~~~ 449 (451)
T 2rkv_A 376 MLSSWAKVGLWDYDFGLGLGKPETVRRPIFEPVESLMYFMPKKPDGEFCAALSLRDEDMDRLKADKEWTKYAQY 449 (451)
T ss_dssp EEEECTTCCGGGCCTTCSSCSCSEEECCBCSCCTTEEEECCCCTTSCEEEEEEEEHHHHHHHHHCHHHHTTCEE
T ss_pred EEeccccCCccccccCCCCCCceEEEcCCccCCCCEEEEecCCCCCCEEEEEEeCHHHHHHHhcCHHHHhhhee
Confidence 9999999999999998 899999986553 3678999998655668999999999999999999999999864
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=98.72 E-value=2.8e-06 Score=85.22 Aligned_cols=285 Identities=15% Similarity=0.139 Sum_probs=153.1
Q ss_pred CcccCCcCccccc--cccceEEEEecCCCCCCCCcchhhHHHHHHHHHHHHHHhhhhcccCccccCCeeEEeCCCCc-eE
Q 012483 27 EDFKLCLMDQSAP--AMFTALLFFYPAANDADHDTENKIAEKLRHLKSSLSKMLTQLYPLAGIIKDHITIECNDEGA-EF 103 (462)
Q Consensus 27 ~~~~LS~lD~~~~--~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~laGrl~~~~~i~~~~~gv-~f 103 (462)
..+|||++.+.+. ..++...+-++.+- + .++|+++|.+++..+|.|-.++.. .+.+. ..
T Consensus 6 ~~~pls~~Q~~~~~~~y~~~~~~~l~g~l----d--------~~~l~~A~~~lv~rh~~LRt~f~~------~~~~~~q~ 67 (422)
T 1q9j_A 6 VIRKLSHSEEVFAQYEVFTSMTIQLRGVI----D--------VDALSDAFDALLETHPVLASHLEQ------SSDGGWNL 67 (422)
T ss_dssp EEEECCHHHHHHHHTTCEEEEEEEEESCC----C--------HHHHHHHHHHHHHHCGGGSEEEEE------CTTSSEEE
T ss_pred eeecCCHHHHHHHhcCceEEEEEEEecCC----C--------HHHHHHHHHHHHHhCccceEEEEe------cCCcceee
Confidence 4589999987542 23355555555443 2 789999999999999999888751 11111 11
Q ss_pred EEEEecc---chhhhccCCChhhhhccCCccccccccCCCceEEEEEEEEecCcEEEEeeecccccchhcHHHHHHHHHH
Q 012483 104 VEARVSC---RLCDILKQPDSVLLGNFLPVEIESTAAQSGRLLFVQANLFTCGGLAIGVCISHKIADAATLGTFINSWAT 180 (462)
Q Consensus 104 ~~a~~d~---~~~~l~~~p~~~~~~~l~p~~~~~~~~~~~Pll~vQvt~~~cGG~~L~~~~~H~v~Dg~~~~~fl~~wa~ 180 (462)
+....+. .+.++........+.. .. ...+ ...|++++.+.. ..++..|.+.+||.++||.|+..|++.|.+
T Consensus 68 v~~~~~~~~~~~~d~~~~~~~~~~~~---~~-~~~d-~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~ 141 (422)
T 1q9j_A 68 VADDLLHSGICVIDGTAATNGSPSGN---AE-LRLD-QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDELFS 141 (422)
T ss_dssp EECCSSSCCCEEEC---------------CC-CCCC-TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHHH
T ss_pred eccCCCCCceEEEECCCCCcchhhhc---cc-CccC-CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHHHHH
Confidence 1111111 1111111110000100 00 0123 567889888877 668899999999999999999999999998
Q ss_pred HHhc-----CCCCCC--CCCc-c-----CCCCC----CCCCC-CCCCCccccCCCCCCCCCCCcccCCCCceEEEEEecH
Q 012483 181 AAAA-----ADPHHH--HHHH-H-----HHHRP----THESP-ASPLFMASSLFPPSDTQIPTMRLIPDKYATKRYVFNT 242 (462)
Q Consensus 181 ~~rg-----~~~~~~--~~~~-~-----~~~~~----~~~~~-~~P~~~~~~~~p~~~~p~~~~~~~~~~~~~~~f~fs~ 242 (462)
.... ...... .... . ..... ..... ..-.|. ..+.+...+|...+...........+.+++
T Consensus 142 ~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~-~~l~~~~~lp~~~~~~~~~~~~~~~~~l~~ 220 (422)
T 1q9j_A 142 RYTDAVTTGDPGPITPQPTPLSMEAVLAQRGIRKQGLSGAERFMSVMYA-YEIPATETPAVLAHPGLPQAVPVTRLWLSK 220 (422)
T ss_dssp HHHHHHHSSSCCCCCCCCCCBCHHHHHHHSSCCC-----CTTSSTTTTC-C-------------CCSBCCCCEEEECCCH
T ss_pred HHHHhhccCCCCCCCCCCCCCCHHHHHHhcCCcccccchhhhhhhhhhc-ccCCCcccCCCCCCCCCCCCccceEEEeCH
Confidence 7752 111000 0000 0 00000 00000 001111 111111111211111112224668889999
Q ss_pred HHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHhhcCCCCCCceeEEEEEecCccccCCCCCCCccccchhhhcccccc
Q 012483 243 SNLAALKAKAASASVQQPTRVESVTALMWKCMINVTRSNKGLKKLSLVSHSVDLRKRVVPPLPENTIGNIVGMFFSAQPV 322 (462)
Q Consensus 243 ~~l~~Lk~~a~~~~~~~~St~dal~AllW~~i~~Ar~~~~~~~~~~~l~~~vd~R~r~~pplp~~Y~GN~v~~~~~~~~~ 322 (462)
+..++||+.|.. ..+|.+.++.|.+-..+.+-+.. + .....+.+++++|....|+++..=+.|.+.+. ....+
T Consensus 221 ~~~~~l~~~a~~---~~~t~~~~l~aa~~~~l~r~~~~--~-~~~v~~g~~~~~R~~~~~~~~~~~~~~~vG~f-~n~lp 293 (422)
T 1q9j_A 221 QQTSDLMAFGRE---HRLSLNAVVAAAILLTEWQLRNT--P-HVPIPYVYPVDLRFVLAPPVAPTEATNLLGAA-SYLAE 293 (422)
T ss_dssp HHHHHHHHHHTT---TTCCHHHHHHHHHHHHHHHHHTC--S-SCCEEEEEEEETTTTSSSCCCTTTBSCCEEEE-EEEEC
T ss_pred HHHHHHHHHHHH---hCCCHHHHHHHHHHHHHHhcccC--C-CceEEEeeeeecccccCCCCChhhhhhhheee-eeeee
Confidence 999999998875 46899999988876666654211 1 34678999999999876554321223333332 22222
Q ss_pred cccccCChHHHHHHHHHHHHHh
Q 012483 323 AAEEEIDLPGLVWALRKAKKEF 344 (462)
Q Consensus 323 ~~~~~~~L~~~A~~IR~ai~~~ 344 (462)
.. .+.++.+++..+++.+.+.
T Consensus 294 ~~-~~~~~~~~l~~v~~~~~~~ 314 (422)
T 1q9j_A 294 IG-PNTDIVDLASDIVATLRAD 314 (422)
T ss_dssp CC-SSCCHHHHHHHHHHHHHHH
T ss_pred cc-CCCCHHHHHHHHHHHHHHH
Confidence 21 2346778888888877663
No 7
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.11 E-value=0.00062 Score=70.12 Aligned_cols=281 Identities=9% Similarity=0.017 Sum_probs=151.9
Q ss_pred CcccCCcCcccc-------c--ccc-ceEEEEecCCCCCCCCcchhhHHHHHHHHHHHHHHhhhhcccCccccC---Ce-
Q 012483 27 EDFKLCLMDQSA-------P--AMF-TALLFFYPAANDADHDTENKIAEKLRHLKSSLSKMLTQLYPLAGIIKD---HI- 92 (462)
Q Consensus 27 ~~~~LS~lD~~~-------~--~~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~laGrl~~---~~- 92 (462)
..+|||+.-+.+ + ..| +...+-++..- + .++|++++.+++..++.|--++.. .+
T Consensus 95 ~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~l----d--------~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~ 162 (520)
T 2jgp_A 95 AYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEGKL----E--------RTRVEAAFQRLIARHESLRTSFAVVNGEPV 162 (520)
T ss_dssp SSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEECC----C--------HHHHHHHHHHHHHHCGGGGEEEEEETTEEE
T ss_pred CCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECCCC----C--------HHHHHHHHHHHHHHhHhheeEEEeeCCEEE
Confidence 468999875421 1 123 55566666544 2 789999999999999998877741 11
Q ss_pred eEEeCCCCceEEEEEeccchhhhccCCChhhhhccCCccccccccCCCceEEEEEEEEecCcEEEEeeecccccchhcHH
Q 012483 93 TIECNDEGAEFVEARVSCRLCDILKQPDSVLLGNFLPVEIESTAAQSGRLLFVQANLFTCGGLAIGVCISHKIADAATLG 172 (462)
Q Consensus 93 ~i~~~~~gv~f~~a~~d~~~~~l~~~p~~~~~~~l~p~~~~~~~~~~~Pll~vQvt~~~cGG~~L~~~~~H~v~Dg~~~~ 172 (462)
.+........+... +.+-+++. + .....-. + .+....|++++.+.....+...|.+.+||.++||.|+.
T Consensus 163 q~v~~~~~~~~~~~--~~~~~~~~-----~-~~~~~~~-~--fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~ 231 (520)
T 2jgp_A 163 QNIHEDVPFALAYS--EVTEEEAR-----E-LVSSLVQ-P--FDLEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSG 231 (520)
T ss_dssp EEECSCCCCCCEEE--ECCHHHHH-----H-HHHHTCC-C--CCTTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHH
T ss_pred EEECCCCCCceEEE--eCCHHHHH-----H-HHHHhcC-C--CCCCCCcceeEEEEEEcCCcEEEEEEccceeecHhHHH
Confidence 11111111111111 11111111 0 1100100 1 12245788888887776577899999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCccCCCCCCCCCCCCCC-------Ccc--ccCCCCCCCCCCC--cccCCCCceEEEEEec
Q 012483 173 TFINSWATAAAAADPHHHHHHHHHHHRPTHESPASPL-------FMA--SSLFPPSDTQIPT--MRLIPDKYATKRYVFN 241 (462)
Q Consensus 173 ~fl~~wa~~~rg~~~~~~~~~~~~~~~~~~~~~~~P~-------~~~--~~~~p~~~~p~~~--~~~~~~~~~~~~f~fs 241 (462)
.|++.+.+...........................+. |.. ....|+..+|... +...........+.++
T Consensus 232 ~l~~el~~~Y~~~~l~~~~~~~~d~~~~~~~~~~~~~~~~~~~yW~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~ 311 (520)
T 2jgp_A 232 ILLAEWVQLYQGDVLPELRIQYKDFAVWQQEFSQSAAFHKQEAYWLQTFADDIPVLNLPTDFTRPSTQSFAGDQCTIGAG 311 (520)
T ss_dssp HHHHHHHHHHTTCCCCCCSCCHHHHHHHHHHHTTSHHHHHHHHHHHHHTSSCCCCCCCCCSSCCCSSCCCBEEEEEEECC
T ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcChhhHHHHHHHHHHhCCCCCcCCCCCCCCCCCCCCCCccEEEEeCC
Confidence 9999999987653211000000000000000000000 000 0001111222111 1112233456788999
Q ss_pred HHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHhhcCCCCCCceeEEEEEecCccccCCCCCCCccccchhhhccccc
Q 012483 242 TSNLAALKAKAASASVQQPTRVESVTALMWKCMINVTRSNKGLKKLSLVSHSVDLRKRVVPPLPENTIGNIVGMFFSAQP 321 (462)
Q Consensus 242 ~~~l~~Lk~~a~~~~~~~~St~dal~AllW~~i~~Ar~~~~~~~~~~~l~~~vd~R~r~~pplp~~Y~GN~v~~~~~~~~ 321 (462)
.+..++|++.+.. ..+|.+.++.|.+-..+.+-.. .....+.+++++|..- --.+..|+.+-.. ....
T Consensus 312 ~~~~~~l~~~a~~---~~~T~~~~l~aa~a~~L~~~~~-----~~dv~~g~~~~gR~~~---~~~~~vG~f~n~l-plr~ 379 (520)
T 2jgp_A 312 KALTEGLHQLAQA---TGTTLYMVLLAAYNVLLAKYAG-----QEDIIVGTPITGRSHA---DLEPIVGMFVNTL-AMRN 379 (520)
T ss_dssp HHHHHHHHHHHHH---HTCCHHHHHHHHHHHHHHHHHT-----CSCEEEEEEECCCCSG---GGTTCCSCCCEEE-EEEE
T ss_pred HHHHHHHHHHHHH---cCCCHHHHHHHHHHHHHHHhcC-----CCCeEEEeccCCCCch---hhhccEEeeeeee-eEEe
Confidence 9999999998875 3578899988876555554322 2457899999999652 2234455554433 2222
Q ss_pred ccccccCChHHHHHHHHHHHHH
Q 012483 322 VAAEEEIDLPGLVWALRKAKKE 343 (462)
Q Consensus 322 ~~~~~~~~L~~~A~~IR~ai~~ 343 (462)
.. +.+.++.+++..+++.+.+
T Consensus 380 ~~-~~~~~~~~~l~~v~~~~~~ 400 (520)
T 2jgp_A 380 KP-QREKTFSEFLQEVKQNALD 400 (520)
T ss_dssp CC-CTTSBHHHHHHHHHHHHHH
T ss_pred cC-CCCCCHHHHHHHHHHHHHH
Confidence 21 1345788888888877755
No 8
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=97.99 E-value=0.0011 Score=67.19 Aligned_cols=289 Identities=11% Similarity=0.033 Sum_probs=149.9
Q ss_pred CcccCCcCcccc-----c-cccceEEEEecCCCCCCCCcchhhHHHHHHHHHHHHHHhhhhcccCccccC---Ce-eEEe
Q 012483 27 EDFKLCLMDQSA-----P-AMFTALLFFYPAANDADHDTENKIAEKLRHLKSSLSKMLTQLYPLAGIIKD---HI-TIEC 96 (462)
Q Consensus 27 ~~~~LS~lD~~~-----~-~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~laGrl~~---~~-~i~~ 96 (462)
..+|||+..+++ + .......+.|.... . ...+.|+++|.+++..++.|--++.. .+ .+..
T Consensus 16 ~~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g----~------ld~~~L~~Al~~lv~rh~~LRt~f~~~~~~~~q~v~ 85 (466)
T 2xhg_A 16 GNVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPE----G------FDPKVIQSVMDKIIEHHDALRMVYQHENGNVVQHNR 85 (466)
T ss_dssp EECCCCHHHHHHHHTTCTTTTCBEEEEEEEETT----C------CCHHHHHHHHHHHHHHSGGGGEEEECGGGCCEEEEC
T ss_pred CCCCCCHHHHHHHhCCCCCcCcceeEEEEEcCC----C------CCHHHHHHHHHHHHHhChHhheEEecCCCceeeecc
Confidence 458999876532 1 11223334444433 1 12789999999999999998877752 11 1111
Q ss_pred C--CCCceEEEEEeccchhhhccCCCh-hhhhccCC--ccccccccCCCceEEEEEEEEecCcEEEEeeecccccchhcH
Q 012483 97 N--DEGAEFVEARVSCRLCDILKQPDS-VLLGNFLP--VEIESTAAQSGRLLFVQANLFTCGGLAIGVCISHKIADAATL 171 (462)
Q Consensus 97 ~--~~gv~f~~a~~d~~~~~l~~~p~~-~~~~~l~p--~~~~~~~~~~~Pll~vQvt~~~cGG~~L~~~~~H~v~Dg~~~ 171 (462)
. ...+.+.+... ....+. ..+..+.- ..+ .+....|++++.+.... ++-.|-+.+||.++||.|+
T Consensus 86 ~~~~~~~~~~~~d~-------~~~~~~~~~~~~~~~~~~~~--fdl~~~pl~r~~l~~~~-~~~~l~l~~HH~i~Dg~S~ 155 (466)
T 2xhg_A 86 GLGGQLYDFFSYNL-------TAQPDVQQAIEAETQRLHSS--MNLQEGPLVKVALFQTL-HGDHLFLAIHHLVVDGISW 155 (466)
T ss_dssp CSSSCCCEEEEEEC-------TTCSCHHHHHHHHHHHHHTT--CCTTTCCCEEEEEEEET-TEEEEEEEEEGGGCCHHHH
T ss_pred ccccccceeEEEec-------CCcccHHHHHHHHHHHHHhc--cCCCCCCeEEEEEEEcC-CCCEEEEEeeeeeechhhH
Confidence 1 11222222211 110110 00100000 001 12345688888887776 5555779999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCccCCCCC------CCCCCCCCCCcc------ccC--CCCCCCCCCCcc--cCCCCceE
Q 012483 172 GTFINSWATAAAAADPHHHHHHHHHHHRP------THESPASPLFMA------SSL--FPPSDTQIPTMR--LIPDKYAT 235 (462)
Q Consensus 172 ~~fl~~wa~~~rg~~~~~~~~~~~~~~~~------~~~~~~~P~~~~------~~~--~p~~~~p~~~~~--~~~~~~~~ 235 (462)
..|++.+.+.................... .......+.+.. ..+ .|+..+|...+. ........
T Consensus 156 ~~l~~el~~~Y~~~~~g~~~~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~~~lp~~~~~~~~~~~~~~~ 235 (466)
T 2xhg_A 156 RILFEDLATGYAQALAGQAISLPEKTDSFQSWSQWLQEYANEADLLSEIPYWESLESQAKNVSLPKDYEVTDCKQKSVRN 235 (466)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCCCCCSCHHHHHHHHHHHTTSHHHHTTHHHHHHHHHHCCCCCCCCSSCCSSCBGGGEEE
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHhcCccchhhhHHHHHhhccCCcccCCccccccccccccceE
Confidence 99999999876532110000000000000 000000000000 000 011122211111 11223456
Q ss_pred EEEEecHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHhhcCCCCCCceeEEEEEecCccccCC-CCCCCccccchh
Q 012483 236 KRYVFNTSNLAALKAKAASASVQQPTRVESVTALMWKCMINVTRSNKGLKKLSLVSHSVDLRKRVVP-PLPENTIGNIVG 314 (462)
Q Consensus 236 ~~f~fs~~~l~~Lk~~a~~~~~~~~St~dal~AllW~~i~~Ar~~~~~~~~~~~l~~~vd~R~r~~p-plp~~Y~GN~v~ 314 (462)
..+.++++..++|++.+.. ...+|.++++.|.+-..+.+-.. .....+.+++++|....+ +--.+-+|+.+-
T Consensus 236 ~~~~l~~~~~~~l~~~~~~--~~~~t~~~~llaa~~~~l~~~~~-----~~dv~ig~~~~gR~~~~~~~~~~~~vG~f~n 308 (466)
T 2xhg_A 236 MRIRLHPEETEQLLKHANQ--AYQTEINDLLLAALGLAFAEWSK-----LAQIVIHLEGHGREDIIEQANVARTVGWFTS 308 (466)
T ss_dssp EEEECCHHHHHHHHHTGGG--TTTCCHHHHHHHHHHHHHHHHHC-----CSEEEEEEEECCCCSCSTTCCCTTCCSCCCE
T ss_pred EEEEcCHHHHHHHHHHhHH--hhCCCHHHHHHHHHHHHHHHHhC-----CCceEEEecCCCCCccccCCCccccccceee
Confidence 7889999999999887743 13578899988876656555422 245789999999976421 122345555544
Q ss_pred hhcccccccccccCChHHHHHHHHHHHHHh
Q 012483 315 MFFSAQPVAAEEEIDLPGLVWALRKAKKEF 344 (462)
Q Consensus 315 ~~~~~~~~~~~~~~~L~~~A~~IR~ai~~~ 344 (462)
.. ...... +.+.++.+++..|++.+..+
T Consensus 309 ~l-plr~~~-~~~~~~~~~l~~v~~~~~~~ 336 (466)
T 2xhg_A 309 QY-PVLLDL-KQTAPLSDYIKLTKENMRKI 336 (466)
T ss_dssp EE-EEEEEC-SCCCSHHHHHHHHHHHHHHS
T ss_pred ec-cEEEec-CCCCCHHHHHHHHHHHHHhC
Confidence 33 111111 13457888999998888765
No 9
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=97.97 E-value=0.00079 Score=67.51 Aligned_cols=253 Identities=9% Similarity=-0.021 Sum_probs=136.0
Q ss_pred HHHHHHHHHHHhhhhcccCccccCCeeEEeCCCCceEEEEEeccchhhhccCCCh-h----hhhccCCccccccccCCCc
Q 012483 67 LRHLKSSLSKMLTQLYPLAGIIKDHITIECNDEGAEFVEARVSCRLCDILKQPDS-V----LLGNFLPVEIESTAAQSGR 141 (462)
Q Consensus 67 ~~~Lk~sL~~~L~~~p~laGrl~~~~~i~~~~~gv~f~~a~~d~~~~~l~~~p~~-~----~~~~l~p~~~~~~~~~~~P 141 (462)
.++|++++.+++..++.|--++.....+........+.+ .++...++. . .+....-. + .+....|
T Consensus 35 ~~~L~~A~~~lv~rh~~LRt~f~~~~~~v~~~~~~~~~~-------~d~~~~~~~~~~~~~~~~~~~~~-~--fdl~~~p 104 (436)
T 1l5a_A 35 TTLLLRALHLTVSEIDLFRARFSAQGELYWHPFSPPIDY-------QDLSIHLEAEPLAWRQIEQDLQR-S--STLIDAP 104 (436)
T ss_dssp HHHHHHHHHHHHHTCGGGGEEECTTCCEEECSSCCCCEE-------EECTTCTTHHHHHHHHHHHHHTS-C--CCCBTSC
T ss_pred HHHHHHHHHHHHHHhheeEEEEEecCCeECCCcCCCccE-------EeCCCCCCHHHHHHHHHHHHhcC-C--CCcCCCC
Confidence 789999999999999999888752100111111111111 111111110 0 11111100 1 1224568
Q ss_pred eEEEEEEEEecCcEEEEeeecccccchhcHHHHHHHHHHHHhcC---CCCCCCCCccCCCC-CCCCCCCCCCCcc-----
Q 012483 142 LLFVQANLFTCGGLAIGVCISHKIADAATLGTFINSWATAAAAA---DPHHHHHHHHHHHR-PTHESPASPLFMA----- 212 (462)
Q Consensus 142 ll~vQvt~~~cGG~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg~---~~~~~~~~~~~~~~-~~~~~~~~P~~~~----- 212 (462)
++++.+.....+...|.+.+||.++||.|+..|++.+.+..... .............. ........+....
T Consensus 105 l~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W 184 (436)
T 1l5a_A 105 ITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTPTAAFKPYQSYLEEEAAYLTSHRYWQDKQFW 184 (436)
T ss_dssp SCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCHHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred CeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhhccHhHHHHHHHH
Confidence 88888777665789999999999999999999999999887632 10000000000000 0000000000000
Q ss_pred -c---cCCCCCCCCCCCcccCCCCceEEEEEecHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHhhcCCCCCCcee
Q 012483 213 -S---SLFPPSDTQIPTMRLIPDKYATKRYVFNTSNLAALKAKAASASVQQPTRVESVTALMWKCMINVTRSNKGLKKLS 288 (462)
Q Consensus 213 -~---~~~p~~~~p~~~~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~St~dal~AllW~~i~~Ar~~~~~~~~~~ 288 (462)
. ...++..+|.. ............+.++++..++|++.+.. ..+|.+.++.|.+-..+.+-. + ...
T Consensus 185 ~~~l~~~~~~~~lp~~-~~~~~~~~~~~~~~l~~~~~~~l~~~a~~---~~~t~~~~l~aa~~~~L~~~~----g--~dv 254 (436)
T 1l5a_A 185 QGYLREAPDLTLTSAT-YDPQLSHAVSLSYTLNSQLNHLLLKLANA---NQIGWPDALVALCALYLESAE----P--DAP 254 (436)
T ss_dssp HHHHHTSCCCCBCCTT-CCGGGCCEEEEEEECCHHHHHHHHHHHHH---TTCCHHHHHHHHHHHHHHHHS----T--TCC
T ss_pred HHHhcCCCCcccCCCC-CCCCcccceeeEEecCHHHHHHHHHHHHH---hCCCHHHHHHHHHHHHHHHhh----C--Cce
Confidence 0 01111122211 11112234577889999999999999876 468899999887655555432 2 347
Q ss_pred EEEEEecCccccCCCCCCCccccchhhhcccccccccccCChHHHHHHHHHHHHHh
Q 012483 289 LVSHSVDLRKRVVPPLPENTIGNIVGMFFSAQPVAAEEEIDLPGLVWALRKAKKEF 344 (462)
Q Consensus 289 ~l~~~vd~R~r~~pplp~~Y~GN~v~~~~~~~~~~~~~~~~L~~~A~~IR~ai~~~ 344 (462)
.+.+++++|..- --.+-.|+.+-.. ...... +.+.++.+++..+++.+.+.
T Consensus 255 ~ig~~~~~R~~~---~~~~~vG~f~n~l-plr~~~-~~~~t~~~~l~~v~~~~~~~ 305 (436)
T 1l5a_A 255 WLWLPFMNRWGS---VAANVPGLMVNSL-PLLRLS-AQQTSLGNYLKQSGQAIRSL 305 (436)
T ss_dssp EEEEEECCCTTS---GGGGSCSCCCEEE-EEECCC-CTTCBHHHHHHHHHHHHHHH
T ss_pred EEeeecccCCCh---HHhcCcceEEEEE-EEEEec-CCCCCHHHHHHHHHHHHHHH
Confidence 899999999641 2234455544333 111111 13457888888888877664
No 10
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=97.79 E-value=0.002 Score=65.75 Aligned_cols=251 Identities=14% Similarity=0.076 Sum_probs=131.9
Q ss_pred HHHHHHHHHHHhhhhcccCccccC---CeeEEeCCCCceEEEEEeccchhhhccCCCh-h----hhhccCCccccccccC
Q 012483 67 LRHLKSSLSKMLTQLYPLAGIIKD---HITIECNDEGAEFVEARVSCRLCDILKQPDS-V----LLGNFLPVEIESTAAQ 138 (462)
Q Consensus 67 ~~~Lk~sL~~~L~~~p~laGrl~~---~~~i~~~~~gv~f~~a~~d~~~~~l~~~p~~-~----~~~~l~p~~~~~~~~~ 138 (462)
.++|+++|.+++..++.|--++.. .+. ........+.+... ...+.. . .+....-.+ .+..
T Consensus 49 ~~~L~~A~~~lv~rh~~LRt~f~~~~~~~~-~v~~~~~~~~~~d~-------~~~~~~~~~~~~~~~~~~~~~---fdl~ 117 (493)
T 4hvm_A 49 DDRLAAAADEVLDAFPLLRVNFVDDDGLWM-RTRENADALVRSDL-------RGHPDPQARCVELLRADRDRP---TDPE 117 (493)
T ss_dssp HHHHHHHHHHHHHHCGGGGEEEEESSSEEE-EECSCCCCEEEEEC-------TTSSSHHHHHHHHHHHHHSSC---CCTT
T ss_pred HHHHHHHHHHHHHhchhceeEEEccCCEEE-EecCCCCCceEEEC-------CCCCchHHHHHHHHHHHhcCC---CCCC
Confidence 799999999999999999887751 222 22221233322211 111110 1 111111110 1224
Q ss_pred CCceEEEEEEEEecCcEEEEeeecccccchhcHHHHHHHHHHHHhcCCCCCCCCCccCCCCCCCC--CCCCCCCc-----
Q 012483 139 SGRLLFVQANLFTCGGLAIGVCISHKIADAATLGTFINSWATAAAAADPHHHHHHHHHHHRPTHE--SPASPLFM----- 211 (462)
Q Consensus 139 ~~Pll~vQvt~~~cGG~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~~~~~~~~~~~~~~--~~~~P~~~----- 211 (462)
..|++++.+.....+...|.+.+||.++||.|+..|++.+.+........ ........ .... ....+...
T Consensus 118 ~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~l~~~l~~~Y~g~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 194 (493)
T 4hvm_A 118 RDPLVRLHLVRLSETDVVLGVVAHQMLLDARSRYMVLGAVWQAYYGRFRP-AQYRDFAE--VADFHPLDRETVRVARHRW 194 (493)
T ss_dssp TSCSEEEEEEECSSSEEEEEEEEETTTCCHHHHHHHHHHHHHHHTTCCCG-GGSBCGGG--TTTCCTTCSHHHHHHHHHH
T ss_pred CCCeEEEEEEEECCCcEEEEEecchhhccHHHHHHHHHHHHHHhCCCCCC-cCHHHHHH--HHhhhhcccChhhHHHHHH
Confidence 46888888877765668999999999999999999999999988322110 00000000 0000 00000000
Q ss_pred -cccC--CCCCCCCCCCcccCCCCceEEEEEecHHHHHHHHHHHhccCCCCCC--hHHHHHHHHHHHHHHhhcCC-----
Q 012483 212 -ASSL--FPPSDTQIPTMRLIPDKYATKRYVFNTSNLAALKAKAASASVQQPT--RVESVTALMWKCMINVTRSN----- 281 (462)
Q Consensus 212 -~~~~--~p~~~~p~~~~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~S--t~dal~AllW~~i~~Ar~~~----- 281 (462)
+..+ .|+ ++.. +.... ......+.++.+..++|++.|.. ..+| .+.++.|.+-..+.+-+...
T Consensus 195 W~~~l~~~~~--l~~~-~~~~~-~~~~~~~~l~~~~~~~l~~~a~~---~~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~ 267 (493)
T 4hvm_A 195 WSRRLPALPV--RGGD-GGPVG-PPETSRLRVPGSRWQALTEPGGP---LGGNGSLAMAALTAWWLWTQGAGTGTDTGAG 267 (493)
T ss_dssp HHHHGGGSCC--CC---------CCEEEEEEEEHHHHHHHHCC---------CHHHHHHHHHHHHHHHC-----------
T ss_pred HHHhccCCCC--CCCC-CCCCC-CCeeEEEEcCHHHHHHHHHHHHH---cCCCchHHHHHHHHHHHHHHHhhhccccccc
Confidence 0000 111 1100 11111 26678899999999999987764 4578 89998887655544431100
Q ss_pred --CCCCceeEEEEEecCccccCCCCCCCccccchhhhcccccccccc--cCChHHHHHHHHHHHHHh
Q 012483 282 --KGLKKLSLVSHSVDLRKRVVPPLPENTIGNIVGMFFSAQPVAAEE--EIDLPGLVWALRKAKKEF 344 (462)
Q Consensus 282 --~~~~~~~~l~~~vd~R~r~~pplp~~Y~GN~v~~~~~~~~~~~~~--~~~L~~~A~~IR~ai~~~ 344 (462)
.+ .....+.+++++|..- --.+.+|+++-.. ....... . +.++.+++..+++.+.+.
T Consensus 268 ~~~g-~~dv~~g~~~~gR~~~---~~~~~vG~f~n~l-plr~~~~-~~~~~t~~~~l~~v~~~~~~~ 328 (493)
T 4hvm_A 268 TGTG-KDSLYLSTEVDLRDHL---QLGSVVGPLTDRV-VFGVDLT-GLREPSFRDLMSRTQAGFLDA 328 (493)
T ss_dssp ------CEEEEEEEEEHHHHT---TCCSBCSCCEEEE-EEEEECT-TCSSCBHHHHHHHHHHHHHHH
T ss_pred CcCC-CCCEEEEeeccCCCCc---chhcCeEeeecee-EEEEecC-CCcCCCHHHHHHHHHHHHHHH
Confidence 11 3468899999999662 3345566654433 2222111 3 467888888888877664
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=97.54 E-value=0.0071 Score=69.48 Aligned_cols=259 Identities=10% Similarity=0.020 Sum_probs=136.0
Q ss_pred HHHHHHHHHHHhhhhcccCccccC-----CeeEEeCCCCceEEEEEeccchhhhccCCCh---hhhhccCCccc-ccccc
Q 012483 67 LRHLKSSLSKMLTQLYPLAGIIKD-----HITIECNDEGAEFVEARVSCRLCDILKQPDS---VLLGNFLPVEI-ESTAA 137 (462)
Q Consensus 67 ~~~Lk~sL~~~L~~~p~laGrl~~-----~~~i~~~~~gv~f~~a~~d~~~~~l~~~p~~---~~~~~l~p~~~-~~~~~ 137 (462)
.++|++++.+++..++.|--++.. ..++........+.+. |+...+.. ..+..+.-... ...+.
T Consensus 49 ~~~l~~A~~~lv~rH~~LRt~f~~~~~~~p~Q~v~~~~~~~~~~~-------d~~~~~~~~~~~~~~~~~~~~~~~~fdl 121 (1304)
T 2vsq_A 49 IKCLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVLKKRQFHIEEI-------DLTHLTGSEQTAKINEYKEQDKIRGFDL 121 (1304)
T ss_dssp HHHHHHHHHHHHHHCGGGGEEEECSSCSSCEEEEESCCCCCEEEE-------ECTTSCHHHHHHHHHHHHHHHHHHCCCT
T ss_pred HHHHHHHHHHHHHhhhhceEEEEEcCCCeEEEEECCCCCCceEEE-------ECCCCCchhHHHHHHHHHHHHhcCCCCC
Confidence 789999999999999988877641 0111111111122111 11111110 01111100000 00123
Q ss_pred CCCceEEEEEEEEecCcEEEEeeecccccchhcHHHHHHHHHHHHhcCCCCCCCCCccCCCCCC-CCCCCCCCCc-----
Q 012483 138 QSGRLLFVQANLFTCGGLAIGVCISHKIADAATLGTFINSWATAAAAADPHHHHHHHHHHHRPT-HESPASPLFM----- 211 (462)
Q Consensus 138 ~~~Pll~vQvt~~~cGG~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~~~~~~~~~~~~-~~~~~~P~~~----- 211 (462)
...|++++.+.....+...|.+.+||.++||.|+..|++.+.+..................... ..........
T Consensus 122 ~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~~~l~~~~~y~d~~~~~~~~~~~~~~~y 201 (1304)
T 2vsq_A 122 TRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKPYSLPPVKPYKDYIKWLEKQDKQASLRY 201 (1304)
T ss_dssp TTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCTHHHHHHHHTSCHHHHHHH
T ss_pred CCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCCCCCCCCcccHHHHHHHHhcchhhHHHHH
Confidence 4568999888887767889999999999999999999999998775421100000000000000 0000000000
Q ss_pred -cc---cCCCCCCCCCCC-cccCCCCceEEEEEecHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHhhcCCCCCCc
Q 012483 212 -AS---SLFPPSDTQIPT-MRLIPDKYATKRYVFNTSNLAALKAKAASASVQQPTRVESVTALMWKCMINVTRSNKGLKK 286 (462)
Q Consensus 212 -~~---~~~p~~~~p~~~-~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~St~dal~AllW~~i~~Ar~~~~~~~~ 286 (462)
+. .+.++..+|... +...........+.++++..++||+.|.. ..+|.+.+|.|.+-..+.|--. ..
T Consensus 202 W~~~L~~~~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~---~~~T~~~vllaa~a~~L~r~tg-----~~ 273 (1304)
T 2vsq_A 202 WREYLEGFEGQTTFAEQRKKQKDGYEPKELLFSPSEAETKAFTELAKS---QHTTLSTALQAVWSVLISRYQQ-----SG 273 (1304)
T ss_dssp HHHHHTTCCCCCTTTTTCCCSSCCCCEEEEEECCCHHHHHHHHHHHHH---TTCCHHHHHHHHHHHHHHHHHT-----CS
T ss_pred HHHHhCCCCccccCCCCCCccccccCcceEEEecCHHHHHHHHHHHHH---cCCCHHHHHHHHHHHHHHHhcC-----CC
Confidence 00 011111222211 11122234567788999999999999886 4578899888865444444321 24
Q ss_pred eeEEEEEecCccccCCCCCCCccccchhhhcccccccccccCChHHHHHHHHHHHHH
Q 012483 287 LSLVSHSVDLRKRVVPPLPENTIGNIVGMFFSAQPVAAEEEIDLPGLVWALRKAKKE 343 (462)
Q Consensus 287 ~~~l~~~vd~R~r~~pplp~~Y~GN~v~~~~~~~~~~~~~~~~L~~~A~~IR~ai~~ 343 (462)
...+..++++|....+.+ .+-.|+.+-.. ...... +.+.++.++...+++.+.+
T Consensus 274 dvv~G~pvsgR~~~~~~~-~~~vG~fvntl-plr~~~-~~~~s~~~ll~~v~~~~~~ 327 (1304)
T 2vsq_A 274 DLAFGTVVSGRPAEIKGV-EHMVGLFINVV-PRRVKL-SEGITFNGLLKRLQEQSLQ 327 (1304)
T ss_dssp EEEEEEEECCCCTTSTTG-GGCCSSCCEEE-EEEEEC-CTTCBHHHHHHHHHHHHHH
T ss_pred CEEEEEEeCCCCccchhh-hcccccceeEE-EEEecC-CCCCcHHHHHHHHHHHHHH
Confidence 688999999996532211 23344433322 111111 1346788888888877655
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=97.41 E-value=0.0039 Score=64.05 Aligned_cols=150 Identities=9% Similarity=-0.032 Sum_probs=93.3
Q ss_pred cEEEEeeecccccchhcHHHHHHHHHHHHhcCCCCCCCCCccCCCCCCCCCCCCCCCc----cccCCCCC----CCC---
Q 012483 154 GLAIGVCISHKIADAATLGTFINSWATAAAAADPHHHHHHHHHHHRPTHESPASPLFM----ASSLFPPS----DTQ--- 222 (462)
Q Consensus 154 G~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~~~~~~~~~~~~~~~~~~P~~~----~~~~~p~~----~~p--- 222 (462)
-.-|.+.+||.++||.|...|++.+-+........... ...|.++ ...+.|+- ..|
T Consensus 177 ~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~-------------~~~~~~~~g~E~~~L~P~~e~~~~~p~~~ 243 (519)
T 3fot_A 177 TVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDS-------------REMKKIQWGQEIKNLSPPVVDSLKLDINT 243 (519)
T ss_dssp EEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CG-------------GGSCCCCTTTTGGGSCCCTGGGBSSCGGG
T ss_pred eEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCc-------------cCCCcCCCCcccccCCcCHHHHhCCCCCC
Confidence 45677888999999999999999999888754311000 0001110 00111111 011
Q ss_pred -C--------------------CC-c-ccCCCCceEEEEEecHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHhhc
Q 012483 223 -I--------------------PT-M-RLIPDKYATKRYVFNTSNLAALKAKAASASVQQPTRVESVTALMWKCMINVTR 279 (462)
Q Consensus 223 -~--------------------~~-~-~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~St~dal~AllW~~i~~Ar~ 279 (462)
. .. + ......-....+.|+++..++|++.|.+..+..+|-+.+|.|.+-.++.+...
T Consensus 244 ~~~e~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~ls~~~t~~L~~~ck~~~~~g~Tvt~~l~Aa~~~al~~~~~ 323 (519)
T 3fot_A 244 LGSEFDDKCTEYTSALVANYKSRGMKFQPGLALPRCVIHKLSADESIDIVKAVKTRLGPGFTISHLTQAAIVLALLDHLK 323 (519)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHSCCSBCCCCCCCEEEEEEECCHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCcceEEEEcCHHHHHHHHHHHHhcCCCCeeHHHHHHHHHHHHHHhhcC
Confidence 0 00 0 01112334578899999999999999986667899999998877666665321
Q ss_pred C-CCCCCceeEEEEEecCccccCCCCCCCccccchhhh
Q 012483 280 S-NKGLKKLSLVSHSVDLRKRVVPPLPENTIGNIVGMF 316 (462)
Q Consensus 280 ~-~~~~~~~~~l~~~vd~R~r~~pplp~~Y~GN~v~~~ 316 (462)
. .........+.++||+|+++.++.-.+|||.++...
T Consensus 324 ~~~~~~~~~~~~~~pvnlR~~l~~~~~~n~~~~~~~~~ 361 (519)
T 3fot_A 324 PNDLSDDEVFISPTSVDGRRWLREDIASNFYAMCQTAA 361 (519)
T ss_dssp ---CCTTCCEEEEEEEECGGGBCHHHHTSCCSCCEEEE
T ss_pred CcccCCCccEEEEeeeeccccCCCcccccccceeeeee
Confidence 1 011123578999999999997665567888776644
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=70.18 E-value=3.2 Score=36.90 Aligned_cols=45 Identities=16% Similarity=0.257 Sum_probs=32.5
Q ss_pred CceEEEEEEEEecCc--EEEEeeecccccchhcHHHHHHHHHHHHhc
Q 012483 140 GRLLFVQANLFTCGG--LAIGVCISHKIADAATLGTFINSWATAAAA 184 (462)
Q Consensus 140 ~Pll~vQvt~~~cGG--~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg 184 (462)
.|++.+--..-+.|. +-|++++||.+.||.-..+|++.+.+....
T Consensus 164 ~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le~ 210 (213)
T 3cla_A 164 APIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCNS 210 (213)
T ss_dssp SCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHTS
T ss_pred ccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHHh
Confidence 577754221112132 678999999999999999999999987643
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=68.58 E-value=3.6 Score=36.72 Aligned_cols=27 Identities=22% Similarity=0.336 Sum_probs=24.6
Q ss_pred EEEEeeecccccchhcHHHHHHHHHHH
Q 012483 155 LAIGVCISHKIADAATLGTFINSWATA 181 (462)
Q Consensus 155 ~~L~~~~~H~v~Dg~~~~~fl~~wa~~ 181 (462)
+-|++++||.+.||.-..+|++.+.+.
T Consensus 189 m~lsls~DHRvvDG~~aa~Fl~~lk~~ 215 (217)
T 2i9d_A 189 MPIAMTIHHGFIDGHHLSLFYKKVEDF 215 (217)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEEecchhhChHHHHHHHHHHHHH
Confidence 578999999999999999999998765
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=68.20 E-value=3.7 Score=36.69 Aligned_cols=44 Identities=11% Similarity=0.305 Sum_probs=33.0
Q ss_pred CceEEEEEEEEecCc---EEEEeeecccccchhcHHHHHHHHHHHHhc
Q 012483 140 GRLLFVQANLFTCGG---LAIGVCISHKIADAATLGTFINSWATAAAA 184 (462)
Q Consensus 140 ~Pll~vQvt~~~cGG---~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg 184 (462)
.|++.+--..-+ +| +-|++++||.+.||.-..+|++.+.+....
T Consensus 168 ~pIi~~G~~~~~-~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le~ 214 (219)
T 1q23_A 168 APVFTMGKYYTQ-GDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDE 214 (219)
T ss_dssp SCEEEECCCEEE-TTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEecccEEEE-CCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHhC
Confidence 476654322223 33 678999999999999999999999887654
No 16
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=65.74 E-value=3.9 Score=36.66 Aligned_cols=32 Identities=16% Similarity=0.321 Sum_probs=28.3
Q ss_pred EEEEeeecccccchhcHHHHHHHHHHHHhcCC
Q 012483 155 LAIGVCISHKIADAATLGTFINSWATAAAAAD 186 (462)
Q Consensus 155 ~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~ 186 (462)
+-|+++++|.+.||.-...|++.+.+......
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~p~ 218 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIEDPN 218 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHTCTT
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHhCHH
Confidence 45899999999999999999999999887643
No 17
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=64.42 E-value=5 Score=36.22 Aligned_cols=30 Identities=10% Similarity=0.206 Sum_probs=27.2
Q ss_pred EEEEeeecccccchhcHHHHHHHHHHHHhc
Q 012483 155 LAIGVCISHKIADAATLGTFINSWATAAAA 184 (462)
Q Consensus 155 ~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg 184 (462)
+-|+++++|.+.||.-...|++.+.+....
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 669999999999999999999999987664
No 18
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=64.29 E-value=5 Score=36.48 Aligned_cols=30 Identities=13% Similarity=0.271 Sum_probs=27.1
Q ss_pred EEEEeeecccccchhcHHHHHHHHHHHHhc
Q 012483 155 LAIGVCISHKIADAATLGTFINSWATAAAA 184 (462)
Q Consensus 155 ~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg 184 (462)
+-|+++++|.+.||.-...|++.+.+....
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 237 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLAD 237 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHhC
Confidence 579999999999999999999999987654
No 19
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=64.12 E-value=4.6 Score=36.56 Aligned_cols=30 Identities=10% Similarity=0.317 Sum_probs=27.2
Q ss_pred EEEEeeecccccchhcHHHHHHHHHHHHhc
Q 012483 155 LAIGVCISHKIADAATLGTFINSWATAAAA 184 (462)
Q Consensus 155 ~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg 184 (462)
+-|+++++|.+.||.-...|++.+.+....
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 233 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLEK 233 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 789999999999999999999999987653
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=62.56 E-value=5.5 Score=36.60 Aligned_cols=30 Identities=27% Similarity=0.509 Sum_probs=27.0
Q ss_pred EEEEeeecccccchhcHHHHHHHHHHHHhc
Q 012483 155 LAIGVCISHKIADAATLGTFINSWATAAAA 184 (462)
Q Consensus 155 ~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg 184 (462)
+-|+++++|.+.||.-...|++.+.+....
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le~ 253 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLEN 253 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHhC
Confidence 568999999999999999999999987654
No 21
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=59.19 E-value=6.9 Score=35.81 Aligned_cols=32 Identities=19% Similarity=0.392 Sum_probs=28.9
Q ss_pred EEEEeeecccccchhcHHHHHHHHHHHHhcCC
Q 012483 155 LAIGVCISHKIADAATLGTFINSWATAAAAAD 186 (462)
Q Consensus 155 ~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~ 186 (462)
+-|+++++|.+.||.-...||+.+.+......
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~P~ 241 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEKIS 241 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHTCC
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhChH
Confidence 45999999999999999999999999988654
No 22
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=57.79 E-value=7.6 Score=35.39 Aligned_cols=30 Identities=13% Similarity=0.380 Sum_probs=27.4
Q ss_pred EEEEeeecccccchhcHHHHHHHHHHHHhc
Q 012483 155 LAIGVCISHKIADAATLGTFINSWATAAAA 184 (462)
Q Consensus 155 ~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg 184 (462)
+-|+++++|.+.||.-...|++.+.+....
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 234 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIES 234 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHhC
Confidence 468999999999999999999999998765
No 23
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=53.70 E-value=26 Score=23.54 Aligned_cols=45 Identities=16% Similarity=0.241 Sum_probs=34.9
Q ss_pred CCceEEEEEecHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHhhcCCC
Q 012483 231 DKYATKRYVFNTSNLAALKAKAASASVQQPTRVESVTALMWKCMINVTRSNK 282 (462)
Q Consensus 231 ~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~St~dal~AllW~~i~~Ar~~~~ 282 (462)
.+.....|+||+|+-+.|++.|.++ -|.+..+|=|.|.++.....
T Consensus 13 k~~~~Vs~Y~SkEey~~L~klA~eE-------~eSV~sfIKR~IlK~l~ykk 57 (66)
T 2k1o_A 13 KRNFSVTFYLSKEEHDVLRRLADEE-------VESVNSFVKRHILKTIIYKK 57 (66)
T ss_dssp CCCEEEEEEEEHHHHHHHHHHHHTT-------CSCHHHHHHHHHHHHHCSSC
T ss_pred ccceEEEEEecHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhc
Confidence 3456789999999999999999864 35577778888888765543
No 24
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=46.31 E-value=12 Score=20.09 Aligned_cols=19 Identities=11% Similarity=0.309 Sum_probs=15.8
Q ss_pred CCCChHHHHHHHHHHHHHH
Q 012483 258 QQPTRVESVTALMWKCMIN 276 (462)
Q Consensus 258 ~~~St~dal~AllW~~i~~ 276 (462)
+-+++.|-|+-++|+.+..
T Consensus 6 svftsqdylsdhlwralna 24 (26)
T 2xl1_A 6 SVFTSQDYLSDHLWRALNA 24 (26)
T ss_pred ceeecHHHHHHHHHHHHhc
Confidence 4467899999999998864
No 25
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=41.96 E-value=32 Score=22.26 Aligned_cols=38 Identities=16% Similarity=0.233 Sum_probs=27.1
Q ss_pred eEEEEEecHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHhh
Q 012483 234 ATKRYVFNTSNLAALKAKAASASVQQPTRVESVTALMWKCMINVT 278 (462)
Q Consensus 234 ~~~~f~fs~~~l~~Lk~~a~~~~~~~~St~dal~AllW~~i~~Ar 278 (462)
....|+||+++-+.|++.|.++. |.+..+|=|.|.++.
T Consensus 2 ~~Vs~Y~SkEey~~L~klA~eE~-------eSV~sfIKR~IlK~l 39 (55)
T 1x93_A 2 RAVSLYFSDEQYQKLEKMANEEE-------ESVGSYIKRYILKAL 39 (55)
T ss_dssp EEEEEEECHHHHHHHHHHHHHTT-------SCTTHHHHHHHHHHH
T ss_pred ceEEEEecHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHH
Confidence 35789999999999999998642 234445556666554
No 26
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=35.65 E-value=7.8 Score=38.39 Aligned_cols=30 Identities=23% Similarity=0.351 Sum_probs=0.0
Q ss_pred EEEEeeecccccchhcHHHHHHHHHHHHhc
Q 012483 155 LAIGVCISHKIADAATLGTFINSWATAAAA 184 (462)
Q Consensus 155 ~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg 184 (462)
+-|+++++|.+.||.-...||+.+.+....
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le~ 420 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLSD 420 (428)
T ss_dssp ------------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHhC
Confidence 359999999999999999999999887654
No 27
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=27.61 E-value=80 Score=24.61 Aligned_cols=40 Identities=18% Similarity=0.312 Sum_probs=30.0
Q ss_pred ccccccceEEEEecCCCCCCCCcchhhHHHHHHHHHHHHHHhhhhcccCcccc
Q 012483 37 SAPAMFTALLFFYPAANDADHDTENKIAEKLRHLKSSLSKMLTQLYPLAGIIK 89 (462)
Q Consensus 37 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~laGrl~ 89 (462)
++....--..+.|+.++ ++.|..+|...+.+-..+||.+.
T Consensus 77 imgsgsgvm~i~f~gdd-------------lea~ekalkemirqarkfagtvt 116 (170)
T 4hhu_A 77 IMGSGSGVMVIVFEGDD-------------LEALEKALKEMIRQARKFAGTVT 116 (170)
T ss_dssp EECTTCCEEEEEEECSC-------------HHHHHHHHHHHHHHHHHTTCEEE
T ss_pred EEeCCceEEEEEEecCc-------------HHHHHHHHHHHHHHHHhhcceEE
Confidence 34333334567777665 78899999999999999999885
No 28
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=24.75 E-value=84 Score=24.52 Aligned_cols=23 Identities=30% Similarity=0.507 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHhhhhcccCcccc
Q 012483 67 LRHLKSSLSKMLTQLYPLAGIIK 89 (462)
Q Consensus 67 ~~~Lk~sL~~~L~~~p~laGrl~ 89 (462)
++.|..+|...+.+-..+||.+.
T Consensus 13 lea~ekalkemirqarkfagtvt 35 (170)
T 4hhu_A 13 LEALEKALKEMIRQARKFAGTVT 35 (170)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHHHHhhcceEE
Confidence 78899999999999889999875
Done!