Query 012484
Match_columns 462
No_of_seqs 267 out of 1754
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 10:20:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012484.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012484hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1tt5_A APPBP1, amyloid protein 100.0 7.5E-91 2.6E-95 731.6 41.7 454 5-460 12-507 (531)
2 3cmm_A Ubiquitin-activating en 100.0 1.6E-57 5.6E-62 506.2 14.6 359 2-460 4-370 (1015)
3 1y8q_A Ubiquitin-like 1 activa 100.0 4.7E-55 1.6E-59 438.6 24.0 304 4-460 15-319 (346)
4 1tt5_B Ubiquitin-activating en 100.0 1.1E-32 3.7E-37 282.8 25.7 158 3-163 4-187 (434)
5 1zud_1 Adenylyltransferase THI 100.0 4.3E-34 1.5E-38 274.5 13.7 158 4-163 5-164 (251)
6 3h8v_A Ubiquitin-like modifier 100.0 4.2E-33 1.4E-37 271.2 11.8 167 7-187 15-197 (292)
7 1jw9_B Molybdopterin biosynthe 100.0 8.5E-33 2.9E-37 265.2 13.1 158 4-163 8-167 (249)
8 1y8q_B Anthracycline-, ubiquit 100.0 2.9E-31 9.9E-36 281.3 18.0 152 11-163 3-154 (640)
9 3cmm_A Ubiquitin-activating en 100.0 1.8E-31 6.2E-36 297.3 17.3 159 5-163 405-572 (1015)
10 2nvu_B Maltose binding protein 100.0 2.4E-30 8.1E-35 287.3 25.1 150 12-164 397-559 (805)
11 3h5n_A MCCB protein; ubiquitin 100.0 1.5E-30 5E-35 261.5 20.7 208 3-224 90-314 (353)
12 3rui_A Ubiquitin-like modifier 100.0 4.4E-29 1.5E-33 246.6 15.8 151 11-162 20-183 (340)
13 3vh1_A Ubiquitin-like modifier 100.0 2.3E-28 7.9E-33 256.2 16.7 155 6-161 301-475 (598)
14 4gsl_A Ubiquitin-like modifier 100.0 2.8E-28 9.7E-33 255.5 16.7 149 13-162 314-475 (615)
15 3dfz_A SIRC, precorrin-2 dehyd 97.5 0.00019 6.6E-09 66.6 7.9 96 22-150 28-123 (223)
16 2g1u_A Hypothetical protein TM 97.3 0.00065 2.2E-08 59.0 8.8 100 20-149 14-117 (155)
17 3jyo_A Quinate/shikimate dehyd 97.2 0.00023 8E-09 68.6 5.2 80 22-126 124-203 (283)
18 3llv_A Exopolyphosphatase-rela 97.2 0.0012 4E-08 56.1 9.1 96 23-148 4-101 (141)
19 2hmt_A YUAA protein; RCK, KTN, 97.2 0.0015 5.3E-08 55.0 9.3 36 22-58 3-38 (144)
20 3ic5_A Putative saccharopine d 97.2 0.0014 4.8E-08 53.3 8.5 94 25-148 5-99 (118)
21 1lss_A TRK system potassium up 97.0 0.0019 6.5E-08 54.2 8.3 88 26-143 5-95 (140)
22 3tum_A Shikimate dehydrogenase 96.9 0.0032 1.1E-07 60.1 9.2 74 23-126 123-196 (269)
23 1id1_A Putative potassium chan 96.8 0.0025 8.7E-08 55.0 6.9 93 24-141 2-95 (153)
24 3l4b_C TRKA K+ channel protien 96.7 0.0031 1.1E-07 57.8 7.3 95 27-148 2-97 (218)
25 3tnl_A Shikimate dehydrogenase 96.7 0.0028 9.4E-08 61.9 7.2 83 23-126 152-235 (315)
26 1pjq_A CYSG, siroheme synthase 96.7 0.0066 2.3E-07 62.4 10.2 99 23-153 10-108 (457)
27 3t4e_A Quinate/shikimate dehyd 96.5 0.0043 1.5E-07 60.5 7.2 84 23-126 146-229 (312)
28 3c85_A Putative glutathione-re 96.5 0.011 3.6E-07 52.5 9.1 93 23-142 37-130 (183)
29 1kyq_A Met8P, siroheme biosynt 96.4 0.0058 2E-07 58.3 7.5 114 22-149 10-141 (274)
30 3fwz_A Inner membrane protein 96.4 0.011 3.9E-07 50.1 8.4 87 25-141 7-95 (140)
31 3abi_A Putative uncharacterize 96.2 0.0098 3.4E-07 59.2 8.3 93 24-149 15-108 (365)
32 2ph5_A Homospermidine synthase 96.1 0.013 4.5E-07 59.9 8.7 100 25-150 13-115 (480)
33 2aef_A Calcium-gated potassium 96.1 0.0086 2.9E-07 55.4 6.7 91 24-144 8-98 (234)
34 3pwz_A Shikimate dehydrogenase 96.0 0.012 4.3E-07 56.0 7.5 74 23-127 118-191 (272)
35 3gvi_A Malate dehydrogenase; N 96.0 0.016 5.4E-07 56.8 8.4 36 22-57 4-39 (324)
36 3o8q_A Shikimate 5-dehydrogena 95.9 0.017 5.9E-07 55.3 8.0 74 23-127 124-197 (281)
37 3e8x_A Putative NAD-dependent 95.8 0.075 2.6E-06 48.7 11.6 38 19-57 15-53 (236)
38 2z2v_A Hypothetical protein PH 95.8 0.022 7.5E-07 56.8 8.3 94 23-149 14-108 (365)
39 4g65_A TRK system potassium up 95.7 0.0082 2.8E-07 61.8 5.1 97 26-149 4-101 (461)
40 3p7m_A Malate dehydrogenase; p 95.6 0.026 8.7E-07 55.2 7.9 35 23-57 3-37 (321)
41 2hk9_A Shikimate dehydrogenase 95.4 0.032 1.1E-06 53.1 7.8 35 23-58 127-161 (275)
42 3don_A Shikimate dehydrogenase 95.4 0.018 6.1E-07 55.1 5.9 113 22-146 114-230 (277)
43 4ina_A Saccharopine dehydrogen 95.4 0.03 1E-06 56.5 7.9 99 26-148 2-106 (405)
44 3tri_A Pyrroline-5-carboxylate 95.3 0.032 1.1E-06 53.3 7.4 34 24-57 2-37 (280)
45 2d4a_B Malate dehydrogenase; a 95.3 0.065 2.2E-06 51.9 9.5 71 27-125 1-75 (308)
46 2raf_A Putative dinucleotide-b 95.3 0.072 2.4E-06 48.4 9.3 37 21-58 15-51 (209)
47 3d1l_A Putative NADP oxidoredu 95.2 0.065 2.2E-06 50.4 9.0 35 23-57 8-42 (266)
48 4e21_A 6-phosphogluconate dehy 95.1 0.027 9.2E-07 55.9 6.4 121 23-152 20-143 (358)
49 3oj0_A Glutr, glutamyl-tRNA re 95.1 0.028 9.7E-07 47.7 5.5 34 23-57 19-52 (144)
50 3vku_A L-LDH, L-lactate dehydr 95.0 0.067 2.3E-06 52.3 8.7 74 24-126 8-85 (326)
51 3gpi_A NAD-dependent epimerase 95.0 0.12 4.3E-06 48.7 10.5 99 24-155 2-114 (286)
52 3l9w_A Glutathione-regulated p 94.9 0.056 1.9E-06 54.7 8.2 89 25-143 4-94 (413)
53 2x0j_A Malate dehydrogenase; o 94.9 0.1 3.5E-06 50.2 9.5 71 27-125 2-77 (294)
54 3d0o_A L-LDH 1, L-lactate dehy 94.9 0.043 1.5E-06 53.5 6.9 37 21-57 2-39 (317)
55 3pqe_A L-LDH, L-lactate dehydr 94.8 0.063 2.2E-06 52.5 8.0 74 25-125 5-81 (326)
56 1lld_A L-lactate dehydrogenase 94.6 0.18 6.1E-06 48.7 10.8 34 25-58 7-41 (319)
57 2hjr_A Malate dehydrogenase; m 94.6 0.084 2.9E-06 51.6 8.4 35 24-58 13-47 (328)
58 3obb_A Probable 3-hydroxyisobu 94.6 0.27 9.2E-06 47.4 11.7 117 26-153 4-126 (300)
59 1hyh_A L-hicdh, L-2-hydroxyiso 94.6 0.24 8.3E-06 47.8 11.4 32 26-57 2-34 (309)
60 3qsg_A NAD-binding phosphogluc 94.5 0.12 4.2E-06 50.0 9.3 34 25-58 24-57 (312)
61 3tl2_A Malate dehydrogenase; c 94.5 0.08 2.7E-06 51.5 7.9 36 23-58 6-41 (315)
62 4ezb_A Uncharacterized conserv 94.5 0.12 4.3E-06 50.1 9.2 34 25-58 24-57 (317)
63 1hdo_A Biliverdin IX beta redu 94.4 0.22 7.7E-06 44.0 10.2 34 25-59 3-37 (206)
64 1oju_A MDH, malate dehydrogena 94.4 0.12 4E-06 49.8 8.7 31 27-57 2-33 (294)
65 3doj_A AT3G25530, dehydrogenas 94.4 0.059 2E-06 52.1 6.6 51 8-59 2-54 (310)
66 1ldn_A L-lactate dehydrogenase 94.4 0.13 4.6E-06 49.9 9.2 72 25-125 6-82 (316)
67 1t2d_A LDH-P, L-lactate dehydr 94.4 0.16 5.3E-06 49.6 9.6 32 26-57 5-36 (322)
68 2ewd_A Lactate dehydrogenase,; 94.4 0.11 3.8E-06 50.4 8.5 33 26-58 5-37 (317)
69 3ggo_A Prephenate dehydrogenas 94.3 0.13 4.5E-06 49.9 9.0 33 26-58 34-67 (314)
70 3rku_A Oxidoreductase YMR226C; 94.3 0.27 9.2E-06 46.8 11.0 67 17-102 25-94 (287)
71 3ruf_A WBGU; rossmann fold, UD 94.2 0.27 9.3E-06 47.7 11.1 112 21-155 21-156 (351)
72 2b69_A UDP-glucuronate decarbo 94.2 0.3 1E-05 47.3 11.4 106 21-155 23-146 (343)
73 3m2p_A UDP-N-acetylglucosamine 94.1 0.16 5.4E-06 48.6 9.1 33 25-58 2-35 (311)
74 3ldh_A Lactate dehydrogenase; 94.1 0.19 6.5E-06 49.1 9.6 32 25-56 21-53 (330)
75 3dqp_A Oxidoreductase YLBE; al 94.1 0.19 6.6E-06 45.3 9.2 96 27-152 2-108 (219)
76 3ius_A Uncharacterized conserv 94.0 0.42 1.4E-05 44.8 11.7 97 25-155 5-108 (286)
77 1ur5_A Malate dehydrogenase; o 94.0 0.2 6.8E-06 48.5 9.4 32 26-57 3-34 (309)
78 4gwg_A 6-phosphogluconate dehy 94.0 0.074 2.5E-06 54.9 6.6 124 25-152 4-131 (484)
79 4aj2_A L-lactate dehydrogenase 93.9 0.084 2.9E-06 51.7 6.5 77 21-125 15-95 (331)
80 2zyd_A 6-phosphogluconate dehy 93.7 0.045 1.5E-06 56.5 4.5 127 20-151 10-140 (480)
81 3slg_A PBGP3 protein; structur 93.7 0.06 2.1E-06 53.0 5.3 40 18-58 17-58 (372)
82 3ew7_A LMO0794 protein; Q8Y8U8 93.7 0.32 1.1E-05 43.6 9.8 94 27-152 2-105 (221)
83 2v6b_A L-LDH, L-lactate dehydr 93.7 0.2 6.7E-06 48.4 8.7 32 27-58 2-34 (304)
84 2rcy_A Pyrroline carboxylate r 93.7 0.056 1.9E-06 50.6 4.7 34 25-58 4-40 (262)
85 4gbj_A 6-phosphogluconate dehy 93.6 0.35 1.2E-05 46.4 10.3 116 25-153 5-126 (297)
86 1vl6_A Malate oxidoreductase; 93.6 0.059 2E-06 53.7 4.8 37 22-58 189-225 (388)
87 3h2s_A Putative NADH-flavin re 93.5 0.24 8E-06 44.7 8.5 95 27-152 2-107 (224)
88 3nep_X Malate dehydrogenase; h 93.5 0.33 1.1E-05 47.1 9.9 31 27-57 2-33 (314)
89 2egg_A AROE, shikimate 5-dehyd 93.4 0.06 2.1E-06 51.9 4.5 36 23-58 139-174 (297)
90 1a5z_A L-lactate dehydrogenase 93.4 0.15 5.1E-06 49.6 7.4 31 27-57 2-33 (319)
91 1ez4_A Lactate dehydrogenase; 93.3 0.28 9.7E-06 47.6 9.2 72 26-126 6-81 (318)
92 3fbt_A Chorismate mutase and s 93.3 0.072 2.5E-06 51.0 4.8 35 23-57 120-154 (282)
93 1lu9_A Methylene tetrahydromet 93.3 0.12 4.1E-06 49.3 6.4 34 23-57 117-151 (287)
94 1lnq_A MTHK channels, potassiu 93.3 0.14 4.9E-06 49.9 7.0 89 25-143 115-203 (336)
95 4id9_A Short-chain dehydrogena 93.2 0.2 6.7E-06 48.6 8.0 39 19-58 13-52 (347)
96 3fi9_A Malate dehydrogenase; s 93.2 0.19 6.4E-06 49.5 7.7 35 23-57 6-42 (343)
97 2axq_A Saccharopine dehydrogen 93.2 0.15 5E-06 52.5 7.1 37 22-58 20-56 (467)
98 3vps_A TUNA, NAD-dependent epi 93.1 0.34 1.1E-05 46.1 9.4 37 22-59 4-41 (321)
99 2f1k_A Prephenate dehydrogenas 93.1 0.24 8E-06 46.8 8.2 30 27-57 2-31 (279)
100 1y1p_A ARII, aldehyde reductas 93.1 1 3.5E-05 43.1 13.0 33 23-56 9-42 (342)
101 3dhn_A NAD-dependent epimerase 93.1 0.79 2.7E-05 41.2 11.5 34 26-60 5-39 (227)
102 3ko8_A NAD-dependent epimerase 93.0 0.58 2E-05 44.4 10.9 30 27-57 2-32 (312)
103 2a9f_A Putative malic enzyme ( 93.0 0.083 2.8E-06 52.7 4.8 38 22-59 185-222 (398)
104 3g0o_A 3-hydroxyisobutyrate de 92.9 0.29 1E-05 46.9 8.6 33 25-58 7-39 (303)
105 2pv7_A T-protein [includes: ch 92.9 0.13 4.3E-06 49.5 6.0 32 26-58 22-54 (298)
106 2g5c_A Prephenate dehydrogenas 92.9 0.33 1.1E-05 45.8 8.9 32 26-57 2-34 (281)
107 3kkj_A Amine oxidase, flavin-c 92.9 0.089 3E-06 47.6 4.7 33 25-58 2-34 (336)
108 3u62_A Shikimate dehydrogenase 92.9 0.088 3E-06 49.5 4.6 36 23-59 107-142 (253)
109 3sxp_A ADP-L-glycero-D-mannohe 92.8 0.39 1.3E-05 46.9 9.6 35 23-58 8-45 (362)
110 2p4q_A 6-phosphogluconate dehy 92.7 0.39 1.3E-05 49.7 9.7 125 24-152 9-137 (497)
111 3b1f_A Putative prephenate deh 92.7 0.3 1E-05 46.3 8.4 35 23-57 4-39 (290)
112 3gvx_A Glycerate dehydrogenase 92.7 0.047 1.6E-06 52.5 2.5 52 7-59 102-155 (290)
113 3ego_A Probable 2-dehydropanto 92.6 0.24 8.2E-06 47.7 7.5 31 25-57 2-32 (307)
114 3pef_A 6-phosphogluconate dehy 92.6 0.13 4.5E-06 48.9 5.6 33 26-59 2-34 (287)
115 3nzo_A UDP-N-acetylglucosamine 92.5 0.85 2.9E-05 45.5 11.7 38 20-57 30-68 (399)
116 3pdu_A 3-hydroxyisobutyrate de 92.5 0.22 7.4E-06 47.4 6.9 33 26-59 2-34 (287)
117 1guz_A Malate dehydrogenase; o 92.5 0.52 1.8E-05 45.5 9.7 32 27-58 2-34 (310)
118 4huj_A Uncharacterized protein 92.5 0.13 4.5E-06 47.0 5.2 31 25-56 23-54 (220)
119 1z82_A Glycerol-3-phosphate de 92.4 0.17 5.8E-06 49.4 6.2 33 24-57 13-45 (335)
120 2zqz_A L-LDH, L-lactate dehydr 92.4 0.34 1.2E-05 47.3 8.3 73 25-126 9-85 (326)
121 2bka_A CC3, TAT-interacting pr 92.4 1.1 3.7E-05 40.8 11.4 37 22-58 15-53 (242)
122 1npy_A Hypothetical shikimate 92.3 0.13 4.3E-06 49.0 4.9 33 24-56 118-150 (271)
123 1pzg_A LDH, lactate dehydrogen 92.2 0.56 1.9E-05 45.8 9.6 33 26-58 10-42 (331)
124 3qha_A Putative oxidoreductase 92.2 0.076 2.6E-06 51.0 3.3 34 25-59 15-48 (296)
125 1y6j_A L-lactate dehydrogenase 92.0 0.21 7.1E-06 48.6 6.2 34 25-58 7-41 (318)
126 2dvm_A Malic enzyme, 439AA lon 92.0 0.12 4.2E-06 52.5 4.6 35 22-56 183-219 (439)
127 1x7d_A Ornithine cyclodeaminas 91.9 0.22 7.5E-06 49.1 6.4 76 24-127 128-204 (350)
128 1p9l_A Dihydrodipicolinate red 91.9 0.29 9.8E-06 45.8 6.8 31 27-57 2-34 (245)
129 4egb_A DTDP-glucose 4,6-dehydr 91.8 0.081 2.8E-06 51.4 3.1 36 23-58 22-59 (346)
130 2dc1_A L-aspartate dehydrogena 91.8 0.35 1.2E-05 44.6 7.3 32 27-58 2-33 (236)
131 3pp8_A Glyoxylate/hydroxypyruv 91.8 0.065 2.2E-06 52.2 2.3 52 7-59 119-172 (315)
132 2xxj_A L-LDH, L-lactate dehydr 91.7 0.42 1.4E-05 46.2 8.1 71 26-125 1-75 (310)
133 4g65_A TRK system potassium up 91.7 0.56 1.9E-05 48.0 9.4 98 24-148 234-331 (461)
134 3c24_A Putative oxidoreductase 91.7 0.49 1.7E-05 44.8 8.4 30 26-56 12-42 (286)
135 3hg7_A D-isomer specific 2-hyd 91.7 0.074 2.5E-06 52.0 2.5 52 7-59 120-173 (324)
136 4dll_A 2-hydroxy-3-oxopropiona 91.7 0.12 4.2E-06 50.2 4.1 37 22-59 28-64 (320)
137 3phh_A Shikimate dehydrogenase 91.6 0.17 5.7E-06 48.0 4.9 32 25-57 118-149 (269)
138 3l6d_A Putative oxidoreductase 91.6 0.13 4.5E-06 49.6 4.3 35 24-59 8-42 (306)
139 2pgd_A 6-phosphogluconate dehy 91.6 0.58 2E-05 48.1 9.4 33 26-59 3-35 (482)
140 2pzm_A Putative nucleotide sug 91.6 1.4 4.9E-05 42.2 11.7 36 22-58 17-53 (330)
141 1nyt_A Shikimate 5-dehydrogena 91.5 0.16 5.5E-06 48.1 4.7 33 23-56 117-149 (271)
142 1omo_A Alanine dehydrogenase; 91.5 0.73 2.5E-05 44.7 9.5 73 24-127 124-197 (322)
143 2iz1_A 6-phosphogluconate dehy 91.3 0.63 2.2E-05 47.7 9.3 33 25-58 5-37 (474)
144 2j6i_A Formate dehydrogenase; 91.3 0.24 8.1E-06 49.2 5.8 52 7-58 140-197 (364)
145 4gx0_A TRKA domain protein; me 91.2 1.5 5E-05 45.9 12.2 87 26-144 349-435 (565)
146 3qvo_A NMRA family protein; st 91.2 0.51 1.7E-05 43.1 7.7 105 23-155 21-130 (236)
147 1gpj_A Glutamyl-tRNA reductase 91.2 0.18 6.1E-06 50.8 4.9 35 23-57 165-199 (404)
148 3ehe_A UDP-glucose 4-epimerase 91.1 0.65 2.2E-05 44.2 8.7 29 26-56 2-31 (313)
149 2h78_A Hibadh, 3-hydroxyisobut 91.0 0.19 6.4E-06 48.2 4.6 32 26-58 4-35 (302)
150 1y81_A Conserved hypothetical 90.9 0.16 5.5E-06 43.0 3.6 40 18-58 7-50 (138)
151 4dgs_A Dehydrogenase; structur 90.9 0.17 5.8E-06 49.7 4.2 51 7-58 147-203 (340)
152 3dtt_A NADP oxidoreductase; st 90.9 0.24 8E-06 46.1 5.1 37 21-58 15-51 (245)
153 2d5c_A AROE, shikimate 5-dehyd 90.8 0.19 6.4E-06 47.3 4.4 33 23-57 115-147 (263)
154 1p77_A Shikimate 5-dehydrogena 90.8 0.15 5.2E-06 48.3 3.7 34 23-57 117-150 (272)
155 3i6i_A Putative leucoanthocyan 90.6 0.7 2.4E-05 44.8 8.5 103 23-147 8-116 (346)
156 3d4o_A Dipicolinate synthase s 90.6 0.23 7.8E-06 47.6 4.8 36 22-58 152-187 (293)
157 3evt_A Phosphoglycerate dehydr 90.5 0.11 3.7E-06 50.8 2.5 50 9-59 118-170 (324)
158 2ywl_A Thioredoxin reductase r 90.5 0.26 9E-06 42.9 4.8 32 27-59 3-34 (180)
159 1sb8_A WBPP; epimerase, 4-epim 90.5 0.6 2.1E-05 45.3 7.9 34 23-57 25-59 (352)
160 2yq5_A D-isomer specific 2-hyd 90.4 0.15 5.1E-06 50.2 3.4 52 7-59 124-181 (343)
161 3rc1_A Sugar 3-ketoreductase; 90.4 0.9 3.1E-05 44.5 9.1 93 21-146 23-117 (350)
162 2q1s_A Putative nucleotide sug 90.2 1.5 5E-05 43.1 10.5 37 22-58 29-66 (377)
163 3r6d_A NAD-dependent epimerase 90.2 0.63 2.2E-05 41.8 7.3 101 26-153 6-111 (221)
164 3gg2_A Sugar dehydrogenase, UD 90.2 1.9 6.6E-05 43.8 11.6 33 26-59 3-35 (450)
165 1qyc_A Phenylcoumaran benzylic 90.1 0.44 1.5E-05 45.1 6.5 101 25-146 4-109 (308)
166 2rir_A Dipicolinate synthase, 90.1 0.26 8.8E-06 47.3 4.8 36 22-58 154-189 (300)
167 1pgj_A 6PGDH, 6-PGDH, 6-phosph 90.1 0.25 8.5E-06 50.9 4.9 31 27-58 3-33 (478)
168 1o6z_A MDH, malate dehydrogena 90.1 1 3.5E-05 43.3 9.0 31 27-57 2-34 (303)
169 2gas_A Isoflavone reductase; N 90.1 0.67 2.3E-05 43.8 7.7 102 25-146 2-108 (307)
170 2ekl_A D-3-phosphoglycerate de 89.9 0.13 4.5E-06 49.9 2.5 35 22-57 139-173 (313)
171 1qp8_A Formate dehydrogenase; 89.8 0.14 4.7E-06 49.6 2.5 52 7-59 103-157 (303)
172 4e12_A Diketoreductase; oxidor 89.8 0.3 1E-05 46.4 4.9 32 26-58 5-36 (283)
173 2ixa_A Alpha-N-acetylgalactosa 89.6 1.7 5.9E-05 43.9 10.8 99 21-146 16-119 (444)
174 2a35_A Hypothetical protein PA 89.6 1.5 5.3E-05 38.7 9.4 34 25-58 5-40 (215)
175 1rkx_A CDP-glucose-4,6-dehydra 89.6 2.6 8.9E-05 40.7 11.7 37 21-58 5-42 (357)
176 3qy9_A DHPR, dihydrodipicolina 89.5 0.96 3.3E-05 42.1 7.9 31 26-57 4-35 (243)
177 3t4x_A Oxidoreductase, short c 89.4 0.61 2.1E-05 43.6 6.7 58 23-100 8-66 (267)
178 3hdj_A Probable ornithine cycl 89.4 0.49 1.7E-05 45.8 6.1 34 25-58 121-155 (313)
179 3ftp_A 3-oxoacyl-[acyl-carrier 89.4 0.28 9.7E-06 46.2 4.4 50 6-56 7-59 (270)
180 2bll_A Protein YFBG; decarboxy 89.4 0.49 1.7E-05 45.5 6.2 31 27-58 2-34 (345)
181 1f0y_A HCDH, L-3-hydroxyacyl-C 89.3 0.34 1.2E-05 46.4 4.9 32 26-58 16-47 (302)
182 3ec7_A Putative dehydrogenase; 89.3 1.9 6.5E-05 42.2 10.5 94 22-146 20-115 (357)
183 3oh8_A Nucleoside-diphosphate 89.3 2.8 9.7E-05 43.1 12.3 33 25-58 147-180 (516)
184 4hb9_A Similarities with proba 89.2 0.33 1.1E-05 47.8 4.9 33 25-58 1-33 (412)
185 3jtm_A Formate dehydrogenase, 89.1 0.43 1.5E-05 47.1 5.5 49 8-57 141-195 (351)
186 2g76_A 3-PGDH, D-3-phosphoglyc 89.0 0.23 7.8E-06 48.7 3.5 49 8-57 144-196 (335)
187 1yb4_A Tartronic semialdehyde 89.0 0.64 2.2E-05 44.0 6.6 30 26-56 4-33 (295)
188 2cul_A Glucose-inhibited divis 89.0 0.4 1.4E-05 43.9 4.9 34 24-58 2-35 (232)
189 1np3_A Ketol-acid reductoisome 89.0 0.46 1.6E-05 46.5 5.6 36 21-57 12-47 (338)
190 1nvt_A Shikimate 5'-dehydrogen 88.9 0.23 7.9E-06 47.4 3.4 33 23-57 126-158 (287)
191 3ghy_A Ketopantoate reductase 88.8 0.37 1.3E-05 47.0 4.8 32 25-57 3-34 (335)
192 1vl0_A DTDP-4-dehydrorhamnose 88.8 1.6 5.5E-05 40.8 9.3 36 22-58 9-45 (292)
193 3gg9_A D-3-phosphoglycerate de 88.8 0.17 5.8E-06 50.0 2.3 36 21-57 156-191 (352)
194 2ydy_A Methionine adenosyltran 88.7 1.2 4.2E-05 42.2 8.4 32 25-57 2-34 (315)
195 2pi1_A D-lactate dehydrogenase 88.7 0.2 6.9E-06 49.1 2.8 37 21-58 137-173 (334)
196 2dpo_A L-gulonate 3-dehydrogen 88.7 0.39 1.3E-05 46.7 4.8 35 23-58 4-38 (319)
197 3e48_A Putative nucleoside-dip 88.6 2.5 8.4E-05 39.5 10.4 98 27-152 2-108 (289)
198 3nv9_A Malic enzyme; rossmann 88.5 0.4 1.4E-05 48.6 4.8 39 21-59 215-255 (487)
199 2i6t_A Ubiquitin-conjugating e 88.5 1 3.5E-05 43.3 7.6 34 25-58 14-48 (303)
200 1ks9_A KPA reductase;, 2-dehyd 88.4 0.41 1.4E-05 45.1 4.7 32 27-59 2-33 (291)
201 2c5a_A GDP-mannose-3', 5'-epim 88.3 1.6 5.6E-05 42.8 9.3 33 25-58 29-62 (379)
202 4f6c_A AUSA reductase domain p 88.2 1.4 4.9E-05 44.0 8.9 109 26-156 70-202 (427)
203 3d1c_A Flavin-containing putat 88.2 0.32 1.1E-05 47.3 4.0 35 25-59 4-38 (369)
204 1qyd_A Pinoresinol-lariciresin 88.2 1.2 4E-05 42.2 7.9 100 25-146 4-112 (313)
205 3q2i_A Dehydrogenase; rossmann 88.1 2.2 7.7E-05 41.5 10.1 89 25-146 13-103 (354)
206 2vhw_A Alanine dehydrogenase; 88.1 0.41 1.4E-05 47.6 4.7 35 22-57 165-199 (377)
207 2x4g_A Nucleoside-diphosphate- 88.1 1.5 5.1E-05 42.0 8.7 31 27-58 15-46 (342)
208 3ijp_A DHPR, dihydrodipicolina 88.0 1.2 4E-05 42.6 7.5 106 18-153 13-122 (288)
209 3vrd_B FCCB subunit, flavocyto 87.9 0.47 1.6E-05 47.0 5.1 35 25-59 2-37 (401)
210 1yvv_A Amine oxidase, flavin-c 87.9 0.47 1.6E-05 45.5 4.9 34 25-59 2-35 (336)
211 2vns_A Metalloreductase steap3 87.8 0.53 1.8E-05 42.7 4.9 32 25-57 28-59 (215)
212 1dih_A Dihydrodipicolinate red 87.8 1.1 3.8E-05 42.3 7.3 96 25-150 5-104 (273)
213 2xdo_A TETX2 protein; tetracyc 87.8 0.37 1.3E-05 47.8 4.2 38 21-59 22-59 (398)
214 3lk7_A UDP-N-acetylmuramoylala 87.7 1.3 4.4E-05 45.0 8.3 36 23-59 7-42 (451)
215 2ew2_A 2-dehydropantoate 2-red 87.6 0.49 1.7E-05 45.1 4.8 31 26-57 4-34 (316)
216 1hye_A L-lactate/malate dehydr 87.6 1.8 6.3E-05 41.6 8.9 31 27-57 2-34 (313)
217 3enk_A UDP-glucose 4-epimerase 87.6 1.5 5E-05 42.1 8.3 32 25-57 5-37 (341)
218 4fn4_A Short chain dehydrogena 87.6 0.81 2.8E-05 42.9 6.1 52 22-93 4-56 (254)
219 3i83_A 2-dehydropantoate 2-red 87.5 0.52 1.8E-05 45.5 4.9 32 26-58 3-34 (320)
220 1zej_A HBD-9, 3-hydroxyacyl-CO 87.5 0.51 1.8E-05 45.2 4.8 32 24-57 11-42 (293)
221 3c96_A Flavin-containing monoo 87.5 0.54 1.8E-05 46.9 5.2 36 24-59 3-38 (410)
222 3adn_A Spermidine synthase; am 87.5 0.9 3.1E-05 43.5 6.5 32 24-58 83-116 (294)
223 2izz_A Pyrroline-5-carboxylate 87.4 0.5 1.7E-05 45.8 4.8 35 23-57 20-57 (322)
224 1pjc_A Protein (L-alanine dehy 87.4 0.48 1.7E-05 46.8 4.7 34 23-57 165-198 (361)
225 1s6y_A 6-phospho-beta-glucosid 87.4 2.5 8.7E-05 42.9 10.2 94 25-143 7-111 (450)
226 3euw_A MYO-inositol dehydrogen 87.4 2.8 9.5E-05 40.6 10.2 88 26-146 5-93 (344)
227 3c1o_A Eugenol synthase; pheny 87.3 1 3.6E-05 42.9 6.9 102 25-146 4-109 (321)
228 3hn2_A 2-dehydropantoate 2-red 87.3 0.51 1.7E-05 45.5 4.7 32 26-58 3-34 (312)
229 3dje_A Fructosyl amine: oxygen 87.3 0.57 2E-05 47.0 5.3 36 25-60 6-41 (438)
230 3uuw_A Putative oxidoreductase 87.2 1.9 6.4E-05 41.2 8.7 35 23-57 4-40 (308)
231 1bg6_A N-(1-D-carboxylethyl)-L 87.2 0.55 1.9E-05 45.8 5.0 33 25-58 4-36 (359)
232 3rp8_A Flavoprotein monooxygen 87.2 0.55 1.9E-05 46.6 5.0 39 20-59 18-56 (407)
233 3pxx_A Carveol dehydrogenase; 87.1 0.52 1.8E-05 44.3 4.6 37 21-58 6-43 (287)
234 1leh_A Leucine dehydrogenase; 87.1 0.53 1.8E-05 46.6 4.8 35 22-57 170-204 (364)
235 1yqg_A Pyrroline-5-carboxylate 87.0 0.57 1.9E-05 43.6 4.8 31 27-57 2-32 (263)
236 3mz0_A Inositol 2-dehydrogenas 87.0 3.9 0.00013 39.6 11.0 90 26-146 3-94 (344)
237 1c0p_A D-amino acid oxidase; a 87.0 0.6 2.1E-05 45.5 5.1 35 25-60 6-40 (363)
238 3g17_A Similar to 2-dehydropan 86.9 0.47 1.6E-05 45.3 4.2 32 26-58 3-34 (294)
239 3sc6_A DTDP-4-dehydrorhamnose 86.8 0.64 2.2E-05 43.5 5.1 104 27-155 7-111 (287)
240 3cgv_A Geranylgeranyl reductas 86.8 0.4 1.4E-05 47.1 3.7 35 24-59 3-37 (397)
241 3qiv_A Short-chain dehydrogena 86.8 0.63 2.2E-05 42.9 4.9 35 22-57 6-41 (253)
242 1e6u_A GDP-fucose synthetase; 86.8 2.7 9.2E-05 39.8 9.6 33 24-57 2-35 (321)
243 2glx_A 1,5-anhydro-D-fructose 86.8 2.8 9.6E-05 40.3 9.8 32 27-58 2-34 (332)
244 2d0i_A Dehydrogenase; structur 86.7 0.49 1.7E-05 46.2 4.2 37 21-58 142-178 (333)
245 3tsc_A Putative oxidoreductase 86.7 1.3 4.4E-05 41.5 7.1 36 22-58 8-44 (277)
246 1j4a_A D-LDH, D-lactate dehydr 86.7 0.65 2.2E-05 45.3 5.1 37 21-58 142-178 (333)
247 2eez_A Alanine dehydrogenase; 86.7 0.56 1.9E-05 46.4 4.7 35 22-57 163-197 (369)
248 1u8x_X Maltose-6'-phosphate gl 86.7 3 0.0001 42.7 10.2 93 24-143 27-130 (472)
249 3lyl_A 3-oxoacyl-(acyl-carrier 86.6 0.99 3.4E-05 41.3 6.2 33 23-56 3-36 (247)
250 4hkt_A Inositol 2-dehydrogenas 86.4 3 0.0001 40.1 9.8 32 26-57 4-36 (331)
251 3rkr_A Short chain oxidoreduct 86.4 0.42 1.5E-05 44.5 3.5 37 20-57 24-61 (262)
252 2cuk_A Glycerate dehydrogenase 86.4 0.62 2.1E-05 45.0 4.7 37 22-59 141-177 (311)
253 1obb_A Maltase, alpha-glucosid 86.3 4.3 0.00015 41.5 11.2 93 24-143 2-105 (480)
254 2dbq_A Glyoxylate reductase; D 86.3 0.62 2.1E-05 45.5 4.7 36 22-58 147-182 (334)
255 1y56_B Sarcosine oxidase; dehy 86.2 0.69 2.4E-05 45.3 5.1 35 25-60 5-39 (382)
256 3ba1_A HPPR, hydroxyphenylpyru 86.2 0.56 1.9E-05 45.8 4.3 36 22-58 161-196 (333)
257 2ejw_A HDH, homoserine dehydro 86.2 2.6 8.8E-05 41.1 9.0 86 25-148 3-97 (332)
258 3ond_A Adenosylhomocysteinase; 86.1 0.62 2.1E-05 47.8 4.8 35 23-58 263-297 (488)
259 2gcg_A Glyoxylate reductase/hy 86.1 0.55 1.9E-05 45.8 4.2 36 22-58 152-187 (330)
260 1pl8_A Human sorbitol dehydrog 86.1 1.4 4.8E-05 43.0 7.3 33 25-57 172-204 (356)
261 2r6j_A Eugenol synthase 1; phe 86.0 1.8 6.2E-05 41.1 7.9 97 26-147 12-112 (318)
262 3nyw_A Putative oxidoreductase 86.0 1.6 5.6E-05 40.2 7.4 53 22-94 4-57 (250)
263 4ej6_A Putative zinc-binding d 86.0 1.1 3.8E-05 44.2 6.5 32 25-56 183-214 (370)
264 1iy9_A Spermidine synthase; ro 85.9 1.1 3.7E-05 42.4 6.1 33 24-58 75-108 (275)
265 3cea_A MYO-inositol 2-dehydrog 85.9 1.8 6.1E-05 41.9 7.9 32 25-56 8-41 (346)
266 1ryi_A Glycine oxidase; flavop 85.8 0.67 2.3E-05 45.3 4.8 35 25-60 17-51 (382)
267 1x13_A NAD(P) transhydrogenase 85.7 0.64 2.2E-05 46.7 4.6 36 23-59 170-205 (401)
268 3evn_A Oxidoreductase, GFO/IDH 85.7 3.9 0.00013 39.4 10.2 36 24-59 4-40 (329)
269 4a9w_A Monooxygenase; baeyer-v 85.7 0.52 1.8E-05 45.3 3.8 34 24-58 2-35 (357)
270 2p2s_A Putative oxidoreductase 85.6 5.3 0.00018 38.4 11.1 35 24-58 3-38 (336)
271 3rft_A Uronate dehydrogenase; 85.6 0.78 2.7E-05 42.8 4.9 34 25-59 3-37 (267)
272 1xdw_A NAD+-dependent (R)-2-hy 85.6 0.7 2.4E-05 45.0 4.7 38 21-59 142-179 (331)
273 3alj_A 2-methyl-3-hydroxypyrid 85.6 0.73 2.5E-05 45.3 4.9 36 23-59 9-44 (379)
274 3db2_A Putative NADPH-dependen 85.6 2.4 8.2E-05 41.3 8.6 33 25-57 5-38 (354)
275 3fbs_A Oxidoreductase; structu 85.6 0.75 2.6E-05 42.9 4.8 33 26-59 3-35 (297)
276 1wwk_A Phosphoglycerate dehydr 85.5 0.71 2.4E-05 44.5 4.7 37 21-58 138-174 (307)
277 3pgx_A Carveol dehydrogenase; 85.5 1.2 4.2E-05 41.7 6.3 37 21-58 11-48 (280)
278 1yb1_A 17-beta-hydroxysteroid 85.5 1.1 3.8E-05 41.8 6.0 35 22-57 28-63 (272)
279 3oz2_A Digeranylgeranylglycero 85.5 0.64 2.2E-05 45.3 4.4 32 26-58 5-36 (397)
280 3cky_A 2-hydroxymethyl glutara 85.4 0.79 2.7E-05 43.5 4.9 31 26-57 5-35 (301)
281 1r6d_A TDP-glucose-4,6-dehydra 85.4 3.7 0.00013 39.1 9.9 32 27-58 2-39 (337)
282 2hun_A 336AA long hypothetical 85.3 2.8 9.5E-05 40.0 8.9 35 24-58 2-38 (336)
283 3gt0_A Pyrroline-5-carboxylate 85.3 0.79 2.7E-05 42.4 4.7 32 26-57 3-37 (247)
284 1mx3_A CTBP1, C-terminal bindi 85.2 0.68 2.3E-05 45.5 4.4 36 22-58 165-200 (347)
285 3hhp_A Malate dehydrogenase; M 85.2 1.7 5.8E-05 42.0 7.2 31 27-57 2-35 (312)
286 1gdh_A D-glycerate dehydrogena 85.2 0.7 2.4E-05 44.9 4.4 35 22-57 143-177 (320)
287 3gaf_A 7-alpha-hydroxysteroid 85.2 0.82 2.8E-05 42.4 4.8 34 22-56 9-43 (256)
288 4b8w_A GDP-L-fucose synthase; 85.1 0.75 2.6E-05 43.3 4.6 27 23-49 4-31 (319)
289 2uzz_A N-methyl-L-tryptophan o 85.1 0.54 1.9E-05 45.8 3.7 35 25-60 2-36 (372)
290 2gf2_A Hibadh, 3-hydroxyisobut 85.1 0.76 2.6E-05 43.5 4.6 31 27-58 2-32 (296)
291 3p2y_A Alanine dehydrogenase/p 85.1 0.72 2.5E-05 45.9 4.5 36 23-59 182-217 (381)
292 3ucx_A Short chain dehydrogena 85.0 1.3 4.6E-05 41.1 6.2 35 22-57 8-43 (264)
293 3fg2_P Putative rubredoxin red 85.0 0.84 2.9E-05 45.4 5.1 35 25-59 1-36 (404)
294 3st7_A Capsular polysaccharide 84.9 1.2 4.2E-05 43.5 6.2 32 27-58 2-34 (369)
295 3ip3_A Oxidoreductase, putativ 84.9 1.1 3.8E-05 43.4 5.8 93 26-146 3-95 (337)
296 1dxy_A D-2-hydroxyisocaproate 84.9 0.8 2.7E-05 44.7 4.7 38 21-59 141-178 (333)
297 1evy_A Glycerol-3-phosphate de 84.8 0.23 7.9E-06 48.9 0.8 30 27-57 17-46 (366)
298 3bio_A Oxidoreductase, GFO/IDH 84.8 2.1 7.2E-05 41.0 7.7 34 23-57 7-42 (304)
299 4a2c_A Galactitol-1-phosphate 84.8 1.5 5.2E-05 42.4 6.8 34 24-57 160-193 (346)
300 1jay_A Coenzyme F420H2:NADP+ o 84.8 0.82 2.8E-05 40.9 4.5 30 27-57 2-32 (212)
301 3e82_A Putative oxidoreductase 84.8 4.7 0.00016 39.4 10.4 87 25-146 7-95 (364)
302 3fef_A Putative glucosidase LP 84.7 1.3 4.4E-05 45.1 6.3 95 23-143 3-103 (450)
303 2ho3_A Oxidoreductase, GFO/IDH 84.7 4.4 0.00015 38.8 10.0 30 27-56 3-33 (325)
304 2vou_A 2,6-dihydroxypyridine h 84.7 0.75 2.6E-05 45.6 4.5 35 24-59 4-38 (397)
305 2uyy_A N-PAC protein; long-cha 84.6 0.86 2.9E-05 43.7 4.8 32 26-58 31-62 (316)
306 3r1i_A Short-chain type dehydr 84.5 1.3 4.6E-05 41.6 6.0 35 22-57 29-64 (276)
307 3u3x_A Oxidoreductase; structu 84.5 4.7 0.00016 39.5 10.2 92 23-146 24-116 (361)
308 2nac_A NAD-dependent formate d 84.5 1.1 3.8E-05 44.8 5.6 35 22-57 188-222 (393)
309 2o4c_A Erythronate-4-phosphate 84.5 0.92 3.1E-05 45.1 5.0 35 22-57 113-147 (380)
310 3ihm_A Styrene monooxygenase A 84.4 0.72 2.5E-05 46.4 4.3 33 26-59 23-55 (430)
311 2w2k_A D-mandelate dehydrogena 84.4 0.78 2.7E-05 45.1 4.4 36 22-58 160-196 (348)
312 3m6i_A L-arabinitol 4-dehydrog 84.3 1.9 6.5E-05 42.1 7.3 32 25-56 180-211 (363)
313 2gf3_A MSOX, monomeric sarcosi 84.3 0.87 3E-05 44.5 4.8 34 26-60 4-37 (389)
314 3sju_A Keto reductase; short-c 84.3 1.1 3.7E-05 42.2 5.3 34 22-56 21-55 (279)
315 1ygy_A PGDH, D-3-phosphoglycer 84.3 0.53 1.8E-05 49.0 3.3 36 22-58 139-174 (529)
316 3oet_A Erythronate-4-phosphate 84.3 0.95 3.2E-05 45.0 5.0 35 22-57 116-150 (381)
317 2vt3_A REX, redox-sensing tran 84.3 1.2 4.2E-05 40.5 5.4 88 25-147 85-174 (215)
318 2jl1_A Triphenylmethane reduct 84.3 2.6 8.9E-05 39.2 7.9 99 26-153 1-110 (287)
319 4g2n_A D-isomer specific 2-hyd 84.2 0.8 2.7E-05 45.0 4.4 37 21-58 169-205 (345)
320 1gy8_A UDP-galactose 4-epimera 84.2 4.9 0.00017 39.3 10.3 32 26-58 3-36 (397)
321 3i3l_A Alkylhalidase CMLS; fla 84.2 0.81 2.8E-05 48.3 4.8 37 22-59 20-56 (591)
322 3nix_A Flavoprotein/dehydrogen 84.2 0.75 2.6E-05 45.7 4.3 35 25-60 5-39 (421)
323 3cxt_A Dehydrogenase with diff 84.1 1.7 5.8E-05 41.2 6.6 34 22-56 31-65 (291)
324 1k0i_A P-hydroxybenzoate hydro 84.1 0.91 3.1E-05 44.7 4.8 34 25-59 2-35 (394)
325 3lf2_A Short chain oxidoreduct 84.1 2.5 8.4E-05 39.3 7.6 34 23-57 6-40 (265)
326 5mdh_A Malate dehydrogenase; o 84.1 2.6 8.7E-05 41.1 7.9 76 26-125 4-87 (333)
327 1sc6_A PGDH, D-3-phosphoglycer 84.0 0.87 3E-05 45.7 4.6 43 15-58 133-177 (404)
328 3tjr_A Short chain dehydrogena 84.0 1.1 3.9E-05 42.6 5.4 33 23-56 29-62 (301)
329 3gdo_A Uncharacterized oxidore 84.0 3.5 0.00012 40.3 9.0 33 25-57 5-39 (358)
330 1f06_A MESO-diaminopimelate D- 84.0 1.6 5.5E-05 42.1 6.5 34 25-58 3-37 (320)
331 2hrz_A AGR_C_4963P, nucleoside 84.0 2.1 7.1E-05 41.1 7.3 36 23-58 12-54 (342)
332 2yvl_A TRMI protein, hypotheti 83.9 6.5 0.00022 35.5 10.4 98 24-147 91-189 (248)
333 1n7h_A GDP-D-mannose-4,6-dehyd 83.9 5.9 0.0002 38.5 10.7 32 26-58 29-61 (381)
334 3dme_A Conserved exported prot 83.9 0.9 3.1E-05 43.9 4.6 33 25-58 4-36 (369)
335 2yy7_A L-threonine dehydrogena 83.8 4.2 0.00014 38.2 9.3 34 25-58 2-37 (312)
336 4fb5_A Probable oxidoreductase 83.7 3.5 0.00012 40.3 9.0 94 21-146 21-122 (393)
337 3o4f_A Spermidine synthase; am 83.7 1.8 6.1E-05 41.4 6.4 73 25-123 84-163 (294)
338 1mjf_A Spermidine synthase; sp 83.7 2 6.9E-05 40.5 6.9 34 24-59 75-108 (281)
339 2q1w_A Putative nucleotide sug 83.6 2.8 9.5E-05 40.2 8.0 36 22-58 18-54 (333)
340 1vpd_A Tartronate semialdehyde 83.6 0.99 3.4E-05 42.8 4.7 31 26-57 6-36 (299)
341 1txg_A Glycerol-3-phosphate de 83.6 0.91 3.1E-05 43.7 4.5 30 27-57 2-31 (335)
342 1iy8_A Levodione reductase; ox 83.6 3.1 0.00011 38.5 8.1 34 22-56 10-44 (267)
343 1ff9_A Saccharopine reductase; 83.5 0.88 3E-05 46.3 4.5 35 24-59 2-36 (450)
344 1tlt_A Putative oxidoreductase 83.5 4.4 0.00015 38.7 9.4 35 24-58 4-40 (319)
345 4dio_A NAD(P) transhydrogenase 83.4 0.93 3.2E-05 45.4 4.5 36 23-59 188-223 (405)
346 7mdh_A Protein (malate dehydro 83.4 4.5 0.00015 40.0 9.4 77 26-125 33-116 (375)
347 1x0v_A GPD-C, GPDH-C, glycerol 83.4 0.55 1.9E-05 45.8 2.8 34 25-58 8-47 (354)
348 4f3y_A DHPR, dihydrodipicolina 83.4 1.4 4.7E-05 41.7 5.5 101 23-153 5-107 (272)
349 3ado_A Lambda-crystallin; L-gu 83.4 1.1 3.8E-05 43.5 4.9 33 25-58 6-38 (319)
350 2fk8_A Methoxy mycolic acid sy 83.4 6.4 0.00022 37.3 10.5 71 25-124 91-162 (318)
351 1sby_A Alcohol dehydrogenase; 83.4 1.1 3.9E-05 41.2 4.9 35 23-57 3-38 (254)
352 3e9m_A Oxidoreductase, GFO/IDH 83.3 2.1 7.2E-05 41.3 7.0 33 24-56 4-37 (330)
353 3axb_A Putative oxidoreductase 83.3 0.7 2.4E-05 46.5 3.7 38 23-60 21-59 (448)
354 3tfo_A Putative 3-oxoacyl-(acy 83.3 0.87 3E-05 42.7 4.1 33 23-56 2-35 (264)
355 2cvz_A Dehydrogenase, 3-hydrox 83.3 0.93 3.2E-05 42.6 4.3 30 26-57 2-31 (289)
356 3eag_A UDP-N-acetylmuramate:L- 83.3 5.2 0.00018 38.6 9.8 32 26-58 5-37 (326)
357 1orr_A CDP-tyvelose-2-epimeras 83.2 3.6 0.00012 39.3 8.6 31 26-57 2-33 (347)
358 1zcj_A Peroxisomal bifunctiona 83.2 0.93 3.2E-05 46.3 4.5 33 25-58 37-69 (463)
359 1b8p_A Protein (malate dehydro 83.1 3.3 0.00011 40.1 8.4 32 26-57 6-44 (329)
360 4iin_A 3-ketoacyl-acyl carrier 83.1 1.1 3.8E-05 41.8 4.8 35 22-57 26-61 (271)
361 3uve_A Carveol dehydrogenase ( 83.1 1.9 6.4E-05 40.6 6.4 36 22-58 8-44 (286)
362 2i99_A MU-crystallin homolog; 83.1 1 3.6E-05 43.3 4.6 35 23-57 133-168 (312)
363 1z45_A GAL10 bifunctional prot 83.0 3.8 0.00013 43.9 9.5 36 21-57 7-43 (699)
364 3fpf_A Mtnas, putative unchara 83.0 8.1 0.00028 36.9 10.8 91 8-126 104-197 (298)
365 4e5n_A Thermostable phosphite 83.0 0.68 2.3E-05 45.1 3.3 37 22-59 142-178 (330)
366 2o7s_A DHQ-SDH PR, bifunctiona 82.9 0.84 2.9E-05 47.5 4.1 35 22-57 361-395 (523)
367 3k6j_A Protein F01G10.3, confi 82.9 1.1 3.8E-05 45.7 4.9 33 26-59 55-87 (460)
368 4gx0_A TRKA domain protein; me 82.9 1.8 6.1E-05 45.2 6.7 35 24-59 126-160 (565)
369 3mog_A Probable 3-hydroxybutyr 82.8 1.1 3.7E-05 46.2 4.8 33 25-58 5-37 (483)
370 3ezy_A Dehydrogenase; structur 82.8 3.8 0.00013 39.7 8.7 31 26-56 3-34 (344)
371 1oc2_A DTDP-glucose 4,6-dehydr 82.8 4.9 0.00017 38.5 9.4 33 26-58 5-39 (348)
372 3e05_A Precorrin-6Y C5,15-meth 82.8 9.7 0.00033 33.3 10.8 77 24-126 40-117 (204)
373 2q0l_A TRXR, thioredoxin reduc 82.8 1.1 3.8E-05 42.3 4.7 32 27-58 3-34 (311)
374 3h9u_A Adenosylhomocysteinase; 82.8 1.1 3.8E-05 45.3 4.8 37 22-59 208-244 (436)
375 1v8b_A Adenosylhomocysteinase; 82.8 1 3.6E-05 46.1 4.7 37 22-59 254-290 (479)
376 2aqj_A Tryptophan halogenase, 82.7 1.2 3.9E-05 46.3 5.1 35 25-60 5-42 (538)
377 3kux_A Putative oxidoreductase 82.7 4.7 0.00016 39.2 9.3 32 26-57 8-41 (352)
378 1l7d_A Nicotinamide nucleotide 82.7 0.92 3.2E-05 45.1 4.2 37 22-59 169-205 (384)
379 2gv8_A Monooxygenase; FMO, FAD 82.6 0.87 3E-05 46.0 4.0 35 24-58 5-40 (447)
380 3ce6_A Adenosylhomocysteinase; 82.5 1.1 3.8E-05 46.2 4.8 35 23-58 272-306 (494)
381 1jg1_A PIMT;, protein-L-isoasp 82.2 4.2 0.00014 36.8 8.3 104 24-153 91-194 (235)
382 4ibo_A Gluconate dehydrogenase 82.2 0.88 3E-05 42.7 3.7 34 22-56 23-57 (271)
383 2oln_A NIKD protein; flavoprot 82.2 1.2 4.2E-05 43.8 5.0 34 26-60 5-38 (397)
384 3hwr_A 2-dehydropantoate 2-red 82.2 1.3 4.4E-05 42.7 4.9 31 24-55 18-48 (318)
385 4h7p_A Malate dehydrogenase; s 82.1 4.2 0.00014 39.8 8.6 82 21-125 20-108 (345)
386 3s55_A Putative short-chain de 82.1 0.95 3.3E-05 42.5 3.9 40 18-58 3-43 (281)
387 3itj_A Thioredoxin reductase 1 82.1 1.3 4.6E-05 42.0 5.1 35 24-59 21-55 (338)
388 2gag_B Heterotetrameric sarcos 82.1 1 3.5E-05 44.3 4.3 37 25-61 21-58 (405)
389 3e03_A Short chain dehydrogena 82.0 3.6 0.00012 38.3 8.0 36 23-59 4-40 (274)
390 1ydw_A AX110P-like protein; st 82.0 8 0.00027 37.6 10.8 33 25-57 6-39 (362)
391 3f9i_A 3-oxoacyl-[acyl-carrier 82.0 2.4 8.2E-05 38.7 6.6 35 22-57 11-46 (249)
392 3m2t_A Probable dehydrogenase; 82.0 2.1 7.2E-05 41.9 6.5 36 24-59 4-41 (359)
393 2c20_A UDP-glucose 4-epimerase 82.0 10 0.00035 35.8 11.3 32 26-58 2-34 (330)
394 1f8f_A Benzyl alcohol dehydrog 81.9 1.7 5.8E-05 42.7 5.8 32 25-56 191-222 (371)
395 3e18_A Oxidoreductase; dehydro 81.8 3.5 0.00012 40.3 8.1 34 24-57 4-38 (359)
396 4hy3_A Phosphoglycerate oxidor 81.8 0.9 3.1E-05 45.0 3.7 37 21-58 172-208 (365)
397 1o0s_A NAD-ME, NAD-dependent m 81.8 0.78 2.7E-05 47.8 3.3 40 21-60 316-365 (605)
398 1iuk_A Hypothetical protein TT 81.8 4.1 0.00014 34.2 7.4 36 22-58 9-49 (140)
399 3ktd_A Prephenate dehydrogenas 81.8 1.3 4.4E-05 43.4 4.8 32 26-58 9-40 (341)
400 1i36_A Conserved hypothetical 81.8 1.1 3.8E-05 41.6 4.2 29 27-56 2-30 (264)
401 2qcu_A Aerobic glycerol-3-phos 81.8 1.3 4.6E-05 45.4 5.2 36 24-60 2-37 (501)
402 3un1_A Probable oxidoreductase 81.8 4.4 0.00015 37.5 8.3 40 20-60 23-63 (260)
403 1inl_A Spermidine synthase; be 81.7 1.7 5.9E-05 41.4 5.6 33 24-58 90-123 (296)
404 3hyw_A Sulfide-quinone reducta 81.5 1.3 4.6E-05 44.4 5.0 35 25-59 2-37 (430)
405 1pj5_A N,N-dimethylglycine oxi 81.5 1.3 4.4E-05 48.7 5.2 36 25-60 4-39 (830)
406 1xg5_A ARPG836; short chain de 81.5 4.8 0.00017 37.4 8.6 36 21-57 28-64 (279)
407 3lzw_A Ferredoxin--NADP reduct 81.5 1.3 4.4E-05 42.1 4.6 34 25-59 7-40 (332)
408 4fgw_A Glycerol-3-phosphate de 81.5 2.9 0.0001 41.6 7.3 30 27-56 36-72 (391)
409 4dqv_A Probable peptide synthe 81.4 3.1 0.00011 42.4 7.8 35 23-57 71-108 (478)
410 1kpg_A CFA synthase;, cyclopro 81.4 9.6 0.00033 35.3 10.7 71 25-124 65-136 (287)
411 1yj8_A Glycerol-3-phosphate de 81.4 0.9 3.1E-05 44.9 3.5 33 26-58 22-60 (375)
412 3n58_A Adenosylhomocysteinase; 81.4 1.3 4.5E-05 44.8 4.7 36 22-58 244-279 (464)
413 3g79_A NDP-N-acetyl-D-galactos 81.3 1.5 5.1E-05 45.0 5.2 40 21-60 14-54 (478)
414 3k96_A Glycerol-3-phosphate de 81.3 1.2 4.2E-05 43.8 4.4 33 25-58 29-61 (356)
415 2bry_A NEDD9 interacting prote 81.3 1.4 4.8E-05 45.3 5.1 33 25-58 92-124 (497)
416 2e4g_A Tryptophan halogenase; 81.3 1.4 4.8E-05 45.9 5.2 35 25-60 25-62 (550)
417 3oec_A Carveol dehydrogenase ( 81.3 1.8 6.3E-05 41.5 5.6 38 20-58 41-79 (317)
418 3kd9_A Coenzyme A disulfide re 81.2 1.4 4.6E-05 44.6 4.9 36 24-59 2-38 (449)
419 2zbw_A Thioredoxin reductase; 81.2 1.4 4.7E-05 42.2 4.7 33 25-58 5-37 (335)
420 3f8d_A Thioredoxin reductase ( 81.2 1.4 4.9E-05 41.5 4.8 33 25-58 15-47 (323)
421 2x3n_A Probable FAD-dependent 81.1 1.3 4.4E-05 43.7 4.6 34 25-59 6-39 (399)
422 2ahr_A Putative pyrroline carb 81.1 1.1 3.7E-05 41.6 3.8 31 26-57 4-34 (259)
423 2d59_A Hypothetical protein PH 81.1 1.9 6.3E-05 36.5 5.0 35 22-57 18-57 (144)
424 1n2s_A DTDP-4-, DTDP-glucose o 81.0 2.3 8E-05 39.8 6.2 31 27-59 2-33 (299)
425 3nyc_A D-arginine dehydrogenas 80.9 2.6 8.7E-05 40.9 6.7 33 24-58 8-40 (381)
426 3orf_A Dihydropteridine reduct 80.8 1.5 5E-05 40.5 4.6 44 15-59 12-56 (251)
427 1z7e_A Protein aRNA; rossmann 80.7 1.4 4.8E-05 47.0 5.0 35 23-58 313-349 (660)
428 3o38_A Short chain dehydrogena 80.7 1.1 3.8E-05 41.6 3.8 35 22-57 19-55 (266)
429 4da9_A Short-chain dehydrogena 80.7 1.2 4.2E-05 41.9 4.1 36 20-56 24-60 (280)
430 3ip1_A Alcohol dehydrogenase, 80.7 2.9 0.0001 41.5 7.1 32 25-56 214-245 (404)
431 2nu8_A Succinyl-COA ligase [AD 80.6 2 7E-05 40.8 5.6 115 25-152 7-125 (288)
432 3gvp_A Adenosylhomocysteinase 80.6 1.5 5E-05 44.3 4.8 36 22-58 217-252 (435)
433 1pj3_A NAD-dependent malic enz 80.6 0.94 3.2E-05 46.9 3.4 40 21-60 280-329 (564)
434 2yjz_A Metalloreductase steap4 81.6 0.33 1.1E-05 43.8 0.0 34 23-57 17-50 (201)
435 3h7a_A Short chain dehydrogena 80.6 2.8 9.4E-05 38.7 6.5 34 23-57 5-39 (252)
436 3k5p_A D-3-phosphoglycerate de 80.4 1.5 5.1E-05 44.1 4.8 37 21-58 152-188 (416)
437 2gn4_A FLAA1 protein, UDP-GLCN 80.4 1.7 5.8E-05 42.2 5.1 35 23-57 19-55 (344)
438 3mw9_A GDH 1, glutamate dehydr 80.4 3.5 0.00012 42.2 7.5 52 23-83 242-293 (501)
439 1xhc_A NADH oxidase /nitrite r 80.3 1.2 4E-05 43.9 3.9 34 24-59 7-40 (367)
440 3v76_A Flavoprotein; structura 80.2 1.5 5.2E-05 44.0 4.8 35 24-59 26-60 (417)
441 3pwk_A Aspartate-semialdehyde 80.2 4.4 0.00015 40.0 8.0 92 26-149 3-95 (366)
442 3ioy_A Short-chain dehydrogena 80.2 3.7 0.00013 39.4 7.5 34 23-57 6-40 (319)
443 2qa1_A PGAE, polyketide oxygen 80.1 1.6 5.4E-05 45.0 5.0 36 22-58 8-43 (500)
444 2weu_A Tryptophan 5-halogenase 80.1 1.2 4.1E-05 45.8 4.1 34 26-60 3-39 (511)
445 2r00_A Aspartate-semialdehyde 80.0 2.8 9.5E-05 40.9 6.5 29 26-54 4-33 (336)
446 3h8l_A NADH oxidase; membrane 79.9 1.5 5.3E-05 43.4 4.8 33 26-59 2-37 (409)
447 1xea_A Oxidoreductase, GFO/IDH 79.9 4.4 0.00015 38.8 7.9 30 26-56 3-34 (323)
448 2gqw_A Ferredoxin reductase; f 79.9 1.6 5.6E-05 43.4 4.9 35 25-59 7-42 (408)
449 4had_A Probable oxidoreductase 79.9 5.7 0.00019 38.4 8.8 89 26-146 24-114 (350)
450 3d64_A Adenosylhomocysteinase; 79.8 1.4 4.8E-05 45.3 4.4 37 22-59 274-310 (494)
451 1rp0_A ARA6, thiazole biosynth 79.8 1.8 6E-05 40.8 4.9 36 23-59 37-73 (284)
452 4g81_D Putative hexonate dehyd 79.8 1.4 4.8E-05 41.2 4.1 33 23-56 7-40 (255)
453 2gqf_A Hypothetical protein HI 79.7 1.4 4.7E-05 44.0 4.3 35 24-59 3-37 (401)
454 2dtx_A Glucose 1-dehydrogenase 79.7 5.6 0.00019 36.8 8.3 37 22-59 5-42 (264)
455 3cty_A Thioredoxin reductase; 79.7 1.7 5.7E-05 41.3 4.7 33 25-58 16-48 (319)
456 2q7v_A Thioredoxin reductase; 79.5 1.7 5.8E-05 41.4 4.7 33 25-58 8-40 (325)
457 2vdc_G Glutamate synthase [NAD 79.5 1.6 5.5E-05 44.4 4.8 33 25-58 122-154 (456)
458 1uir_A Polyamine aminopropyltr 79.4 2.7 9.2E-05 40.4 6.1 33 24-58 77-110 (314)
459 1mv8_A GMD, GDP-mannose 6-dehy 79.4 1.6 5.5E-05 44.1 4.7 31 27-58 2-32 (436)
460 3fr7_A Putative ketol-acid red 79.4 2.2 7.4E-05 43.8 5.6 30 18-47 46-76 (525)
461 3klj_A NAD(FAD)-dependent dehy 79.3 2.4 8.3E-05 41.9 5.9 33 25-58 146-178 (385)
462 1c1d_A L-phenylalanine dehydro 79.3 1.8 6.1E-05 42.6 4.8 36 22-58 172-207 (355)
463 3i23_A Oxidoreductase, GFO/IDH 79.2 5.6 0.00019 38.6 8.5 89 26-146 3-93 (349)
464 3qlj_A Short chain dehydrogena 79.2 2.4 8E-05 40.8 5.7 42 16-58 18-60 (322)
465 3c4n_A Uncharacterized protein 79.2 1.7 5.7E-05 43.2 4.7 46 13-60 23-72 (405)
466 3ing_A Homoserine dehydrogenas 79.1 8.1 0.00028 37.4 9.4 25 23-47 2-26 (325)
467 3c1a_A Putative oxidoreductase 79.1 4.5 0.00015 38.6 7.7 34 25-58 10-44 (315)
468 2i76_A Hypothetical protein; N 79.0 1.1 3.8E-05 42.2 3.2 22 26-47 3-24 (276)
469 2rgh_A Alpha-glycerophosphate 79.0 2.5 8.5E-05 44.3 6.2 35 25-60 32-66 (571)
470 2y0c_A BCEC, UDP-glucose dehyd 79.0 1.8 6.2E-05 44.4 5.0 35 24-59 7-41 (478)
471 3g3e_A D-amino-acid oxidase; F 78.9 1.9 6.3E-05 41.7 4.9 34 27-60 2-40 (351)
472 1q1r_A Putidaredoxin reductase 78.9 1.9 6.4E-05 43.4 5.0 35 25-59 4-39 (431)
473 2qyt_A 2-dehydropantoate 2-red 78.8 1.6 5.6E-05 41.5 4.4 30 27-56 10-44 (317)
474 4f6l_B AUSA reductase domain p 78.8 4.9 0.00017 41.1 8.3 109 26-156 151-283 (508)
475 1oaa_A Sepiapterin reductase; 78.8 3.6 0.00012 37.8 6.7 33 23-56 4-40 (259)
476 3ab1_A Ferredoxin--NADP reduct 78.8 1.5 5.2E-05 42.4 4.2 33 25-58 14-46 (360)
477 3mtj_A Homoserine dehydrogenas 78.8 4.8 0.00016 40.8 7.9 22 24-45 9-30 (444)
478 2i7c_A Spermidine synthase; tr 78.7 2.4 8.3E-05 40.0 5.5 34 24-59 78-112 (283)
479 3moi_A Probable dehydrogenase; 78.7 6.3 0.00021 38.9 8.8 32 26-57 3-36 (387)
480 2x6t_A ADP-L-glycero-D-manno-h 78.7 2 6.7E-05 41.6 5.0 40 19-58 40-80 (357)
481 3sc4_A Short chain dehydrogena 78.6 4.8 0.00016 37.8 7.6 37 23-60 7-44 (285)
482 3f1l_A Uncharacterized oxidore 78.6 2 7E-05 39.5 4.8 35 22-57 9-44 (252)
483 2o07_A Spermidine synthase; st 78.6 2.8 9.7E-05 40.1 6.0 33 24-58 95-128 (304)
484 1zk7_A HGII, reductase, mercur 78.5 1.9 6.4E-05 43.7 4.9 34 25-59 4-37 (467)
485 3ef6_A Toluene 1,2-dioxygenase 78.4 2.1 7E-05 42.7 5.1 34 26-59 3-37 (410)
486 3fhl_A Putative oxidoreductase 78.4 3.4 0.00011 40.4 6.6 34 25-58 5-40 (362)
487 3ihg_A RDME; flavoenzyme, anth 78.4 1.4 4.7E-05 45.7 3.9 34 25-59 5-38 (535)
488 3lxd_A FAD-dependent pyridine 78.3 1.6 5.6E-05 43.4 4.3 35 25-59 9-44 (415)
489 3atr_A Conserved archaeal prot 78.3 1.3 4.3E-05 44.8 3.6 34 25-59 6-39 (453)
490 4h3v_A Oxidoreductase domain p 78.2 4.3 0.00015 39.6 7.4 93 22-146 3-103 (390)
491 2qa2_A CABE, polyketide oxygen 78.1 1.6 5.6E-05 44.9 4.4 34 24-58 11-44 (499)
492 3upl_A Oxidoreductase; rossman 78.1 14 0.00047 37.4 11.1 97 24-147 22-137 (446)
493 3fmw_A Oxygenase; mithramycin, 78.1 1.8 6.2E-05 45.4 4.8 34 25-59 49-82 (570)
494 1zh8_A Oxidoreductase; TM0312, 77.8 7.2 0.00025 37.6 8.8 95 20-146 13-110 (340)
495 3d3w_A L-xylulose reductase; u 77.8 2.2 7.7E-05 38.7 4.8 33 23-56 5-38 (244)
496 3qj4_A Renalase; FAD/NAD(P)-bi 77.8 1.4 4.9E-05 42.4 3.6 32 26-58 2-36 (342)
497 2p91_A Enoyl-[acyl-carrier-pro 77.7 1.4 4.9E-05 41.4 3.6 36 21-57 17-55 (285)
498 3u95_A Glycoside hydrolase, fa 77.7 3.2 0.00011 42.5 6.4 76 27-125 2-84 (477)
499 2xve_A Flavin-containing monoo 77.7 2 6.9E-05 43.7 4.9 33 26-58 3-40 (464)
500 3iwa_A FAD-dependent pyridine 77.7 2 6.9E-05 43.6 4.9 35 25-59 3-38 (472)
No 1
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=100.00 E-value=7.5e-91 Score=731.57 Aligned_cols=454 Identities=40% Similarity=0.741 Sum_probs=413.2
Q ss_pred cchhhhHHhhcCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHH
Q 012484 5 KTKYDRQLRIWGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSV 84 (462)
Q Consensus 5 ~~rYdRQl~l~G~~~q~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~ 84 (462)
.+|||||+++||.++|++|++++|+|||+||+|+++||||+++|||+|||+|+|.|+.+||+|||+++.+|||++||+++
T Consensus 12 ~~rY~Rqi~l~G~~~q~~L~~~~VlvvG~GGlGseiak~La~aGVg~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~Ka~~a 91 (531)
T 1tt5_A 12 EQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAA 91 (531)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHCEEEEECCSHHHHHHHHHHHTTTCSEEEEECCCBBCHHHHHHCTTCCGGGBTSBHHHHH
T ss_pred HHHhhHHHHhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEechhhcccCccCChhhcCcHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCeEEEEecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEEEEeeccceEEEEEEeCCc
Q 012484 85 CAFLQELNDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGLTGFVRISVKEH 164 (462)
Q Consensus 85 ~~~l~~lNp~v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~~G~v~~~~~~h 164 (462)
+++|+++||+|+++.+......+.+...+++++||+||+|.++...+..++++|+.+++|+|.+++.|++|++++++|+|
T Consensus 92 ~~~l~~lNp~v~v~~~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~ln~~c~~~~iplI~~~~~G~~G~v~~~~p~~ 171 (531)
T 1tt5_A 92 MEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEH 171 (531)
T ss_dssp HHHHHTTCTTSBCCEESSCHHHHHHSCGGGGGGCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEEEETTEEEEEEECSCE
T ss_pred HHHHHHhCCCCeEEEeCCCcchhhhhhHHHhcCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEEEecCCeEEEEEEcCCc
Confidence 99999999999999888766655455678899999999999999999999999999999999999999999999999999
Q ss_pred eeeecCCCCCCCCcccCCCCchhhhhhhcccCCCCCCCccCCCcHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHh
Q 012484 165 TVVESKPDHFLDDLRLNNPWPELRKFAETFDLNVPDPVAHKHTPYVVILIKMSEEWTNSHGGSLPSTREEKREFKELLKS 244 (462)
Q Consensus 165 ~~~~~~~~~~~~~lrl~~p~p~l~~~~~~~d~~~~~~~~~~~~P~~v~l~~~~~~~~~~~~g~~p~~~~~~~~f~~~~~~ 244 (462)
++++.+|+...+++|+.+|||++.+++.++|.+.++...++|+|++++++++++.||..|+|+.|+++.++.+|++++.+
T Consensus 172 ~~~d~~~~~~~~~lr~~~p~P~~~~~~~~~~~~~~~~~~~~~~p~vv~~~~ale~~k~~~~g~~P~~~~~~~~f~~~i~~ 251 (531)
T 1tt5_A 172 PVIESHPDNALEDLRLDKPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEKEDFRDLIRQ 251 (531)
T ss_dssp EESCCCCSSCCCCCCSSSCCHHHHHHHHTCC-------CGGGSCHHHHHHHHHHHHTTTTCCCCCCHHHHHHHHHHHHHH
T ss_pred eeccCCCCCCCCcccccCCCCCchhhhhccCcccccCCCcCCchHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHh
Confidence 99999998888999999999999999999999988999999999999999999999999999999999999999999999
Q ss_pred cccC-CCCCCHHHHHHHhhcccCCCCccHHHHHHHh--------cCCCChhHHHHHhh----------------------
Q 012484 245 KMVA-IDEDNYKEAIEASFKVFAPPGIKLALSKVLQ--------SADSSFFPFSIAIG---------------------- 293 (462)
Q Consensus 245 ~~~~-~~~~nf~EA~~~~~~~~~~~~i~~~i~~~~~--------~~~~~f~~l~~al~---------------------- 293 (462)
+|+. .+++||+||+++++++++|+++|++++++|+ ..++.||++++||+
T Consensus 252 ~~~~~~~e~N~~Ea~~~~~~~~~~~~i~~~v~~~~~~~~~~~~~~~s~~Fwil~~alk~F~~~~~~g~lPl~g~ipDm~s 331 (531)
T 1tt5_A 252 GILKPEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVRGTIPDMIA 331 (531)
T ss_dssp TTSSCTTHHHHHHHHHHHHHHSCCCCCCHHHHHHHTSHHHHSCCSSCCHHHHHHHHHHHHHHTTTTTSCCCCCCCCCCSS
T ss_pred hcccCccccchHHHHHHHHhhcCCccCcHHHHHHhcccccccccCCCchHHHHHHHHHHHHHhcCCCCCCCCCccCcccc
Confidence 8855 4678999999999999999999999999996 23578999999986
Q ss_pred ---------hhh-HHHHHhHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHhcccceEeeccccccccCCCChhhHhhhh
Q 012484 294 ---------RPW-IFAEADCLAIEQRVRNNLKKLGREPESISKATIKSFCRNARKLKVCRYRLLEDEFSNPSVPDIQKYL 363 (462)
Q Consensus 294 ---------~iy-~ka~~D~~~~~~~~~~~l~~~g~~~~~i~~~~i~~f~~n~~~~~~i~~~sl~~~~~~p~~~~~~~~~ 363 (462)
++| +||.+|++.|..+++++++++|+++..|+...++.||||.+.++++++++|++++..|..+. ....
T Consensus 332 ~t~~Y~~lq~iy~~ka~~D~~~v~~~v~~~~~~~~~~~~~i~~~~i~~f~kn~~~l~~i~~~~l~~~~~~~~~~~-~~~~ 410 (531)
T 1tt5_A 332 DSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDTINK-DEII 410 (531)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSSSCHHHHHHHHHTGGGCEEECCCCHHHHHSTTTSCH-HHHH
T ss_pred chhcccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCCHHHHHHHHhchhhhhcccccchHhhhccccchh-hhhh
Confidence 789 99999999999999999999999889999999999999999999999999999998875422 0112
Q ss_pred ccc-chhhHHHHHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHHHHhhcCCCCCCchHHHHHHHHHhCCCcchh
Q 012484 364 TDE-DYSVAMGFYILLRAVDRFAANYNNYPGEFDGPMDEDISRLKTTAVSVLNDLGCNGSTLTEDLINEMCRFGAAELHA 442 (462)
Q Consensus 364 ~~~-~~~~~~~~~~~l~a~~~F~~~~gr~P~~~~~~~~~D~~~l~~~~~~~~~~~~~~~~~i~~~~v~e~~r~~~~el~~ 442 (462)
.+. +.+++..||++|||+++|.++|||+|++++.+.++|+++|.+++++++++.++. +.+++++++|++|++++||||
T Consensus 411 ~~~~~~~~~~~~~~~~~al~~f~~~~gr~P~~~~~~~~~D~~~l~~~~~~~~~~~~~~-~~~~~~~~~e~~r~~~~el~p 489 (531)
T 1tt5_A 411 SSMDNPDNEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLS-VMVKDDYVHEFCRYGAAEPHT 489 (531)
T ss_dssp HHTTSTTSTHHHHHHHHHHHHHHHHHSSCTTCSTTTHHHHHHHHHHHHHHHHHHHTCC-CCCCHHHHHHHHHTTTCCCHH
T ss_pred hhhhccccchHHHHHHHHHHHHHHHhCCCCCccccchHHHHHHHHHHHHHHHHhcCCc-ccccHHHHHHHHHhcCCCcCH
Confidence 232 235678999999999999999999999877667899999999999999888764 568899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 012484 443 VAAFIGGVASQEVIKVVF 460 (462)
Q Consensus 443 vaa~~GGiaaQE~iK~i~ 460 (462)
||||+||+|||||||+||
T Consensus 490 vaA~~GGi~AQEviK~iT 507 (531)
T 1tt5_A 490 IAAFLGGAAAQEVIKIIT 507 (531)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc
Confidence 999999999999999997
No 2
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-57 Score=506.24 Aligned_cols=359 Identities=23% Similarity=0.376 Sum_probs=280.0
Q ss_pred CCccchhhhHHhhcCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHH
Q 012484 2 AEPKTKYDRQLRIWGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKA 81 (462)
Q Consensus 2 ~~~~~rYdRQl~l~G~~~q~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka 81 (462)
+.+++|||||+|+||.+||++|++++|+|+|+||+|+++||||+++|||+|||+|+|.|+.+||+|||+++.+|||++||
T Consensus 4 ~id~~rY~Rqi~l~G~~~q~rL~~s~VlIvG~GGlGseiak~La~aGVg~itlvD~D~V~~sNL~RQ~l~~~~dvG~~Ka 83 (1015)
T 3cmm_A 4 EIDESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGVKSMTVFDPEPVQLADLSTQFFLTEKDIGQKRG 83 (1015)
T ss_dssp CCCHHHHHHHHHHSCHHHHHHHTTCEEEEECCSHHHHHHHHHHHHHCCSEEEEECCSBCCGGGGGTCTTCCGGGTTSBHH
T ss_pred hhhhHhccchHhhcCHHHHHHHhcCEEEEECCChHHHHHHHHHHHcCCCeEEEecCCEechhhhccccccChhhcChHHH
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCeEEEEecChhhhhcCCcCCCCCCcEEEEcCC-ChHHHHHHHHHHHHcCceEEEEeeccceEEEEEE
Q 012484 82 KSVCAFLQELNDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQL-GEEKMIKLDRICREANVMLIFARSYGLTGFVRIS 160 (462)
Q Consensus 82 ~~~~~~l~~lNp~v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~-~~~~~~~l~~~~~~~~ip~i~~~~~G~~G~v~~~ 160 (462)
++++++|+++||+|+++++.... +++++++||+||+|.+ +...+..++++|+++++|+|++++.|++|++|++
T Consensus 84 ~a~~~~L~~lNP~v~v~~~~~~l------~~~~l~~~DvVv~~~d~~~~~r~~ln~~c~~~~iplI~~~~~G~~G~v~~d 157 (1015)
T 3cmm_A 84 DVTRAKLAELNAYVPVNVLDSLD------DVTQLSQFQVVVATDTVSLEDKVKINEFCHSSGIRFISSETRGLFGNTFVD 157 (1015)
T ss_dssp HHHHHHHTTSCTTSCEEECCCCC------CSTTGGGCSEEEECTTSCHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHCCCCeEEEecCCC------CHHHHhcCCEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEEecccEEEEEec
Confidence 99999999999999998876432 3468899999999999 9999999999999999999999999999999999
Q ss_pred eCC-ceeeecCCCCCCCCcccCCCCchhhhhhhcccCCCCCCCccCCCcHHHHHHHHHHHHH-HhcCCCCCCCHHHHHHH
Q 012484 161 VKE-HTVVESKPDHFLDDLRLNNPWPELRKFAETFDLNVPDPVAHKHTPYVVILIKMSEEWT-NSHGGSLPSTREEKREF 238 (462)
Q Consensus 161 ~~~-h~~~~~~~~~~~~~lrl~~p~p~l~~~~~~~d~~~~~~~~~~~~P~~v~l~~~~~~~~-~~~~g~~p~~~~~~~~f 238 (462)
+++ |.+++.+++ .|++.+.. +++- |++ +++++.|+ ..++|+ +.+|
T Consensus 158 ~~~~~~c~~~~~~---------~p~~~~i~---~i~~-----------p~~---v~~l~~~~h~~~~gd-------~v~F 204 (1015)
T 3cmm_A 158 LGDEFTVLDPTGE---------EPRTGMVS---DIEP-----------DGT---VTMLDDNRHGLEDGN-------FVRF 204 (1015)
T ss_dssp CCSCEEESBSSCC---------CCCEEEEE---EECT-----------TCE---EEESTTCCCCCCTTC-------EEEE
T ss_pred CCCceEEeeCCCC---------CCcccccc---CCCC-----------Cce---eEeeecccccCCCCC-------eEEE
Confidence 987 556665544 34443322 2210 111 23333332 123332 2344
Q ss_pred HHHHHhcccCCCCCCHHHHHHHhhcccCCCCccHHHHHHHhcCCCChhHHHHHhhhhhHHHHHhHHHHHHHHHHHHHhhC
Q 012484 239 KELLKSKMVAIDEDNYKEAIEASFKVFAPPGIKLALSKVLQSADSSFFPFSIAIGRPWIFAEADCLAIEQRVRNNLKKLG 318 (462)
Q Consensus 239 ~~~~~~~~~~~~~~nf~EA~~~~~~~~~~~~i~~~i~~~~~~~~~~f~~l~~al~~iy~ka~~D~~~~~~~~~~~l~~~g 318 (462)
+++ ++|.+. |+.|+. ..+++.| ..|| ..|
T Consensus 205 ~ev--~gm~el---N~~e~~--~i~~~~p---------------~~f~-------------I~D---------------- 233 (1015)
T 3cmm_A 205 SEV--EGLDKL---NDGTLF--KVEVLGP---------------FAFR-------------IGS---------------- 233 (1015)
T ss_dssp ECC--BTSGGG---GSSCCE--ECEEEET---------------TEEE-------------CSC----------------
T ss_pred Eee--ccchhh---cCccce--eeEEcCC---------------ceeE-------------ecc----------------
Confidence 444 455433 333321 1222222 2334 112
Q ss_pred CCCCCCCHHHHHHHHHhcccceEeeccccccccCCCChhhHhhhhccc-chhhHHHHHHHHHHHHHHHHHc-CCCCCCCC
Q 012484 319 REPESISKATIKSFCRNARKLKVCRYRLLEDEFSNPSVPDIQKYLTDE-DYSVAMGFYILLRAVDRFAANY-NNYPGEFD 396 (462)
Q Consensus 319 ~~~~~i~~~~i~~f~~n~~~~~~i~~~sl~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~l~a~~~F~~~~-gr~P~~~~ 396 (462)
...++.+.-++++++++.++.+.|+|+++.+++|.. ...+. +..++..+|++|||+++|.++| ||+|++++
T Consensus 234 --ts~~~~yv~~g~~~qvk~p~~i~f~~l~~~l~~p~~-----l~~d~~k~~~~~~l~~~~~Al~~F~~~~~gr~P~~~~ 306 (1015)
T 3cmm_A 234 --VKEYGEYKKGGIFTEVKVPRKISFKSLKQQLSNPEF-----VFSDFAKFDRAAQLHLGFQALHQFAVRHNGELPRTMN 306 (1015)
T ss_dssp --CTTTCCCCBCCEEEECCCCEEECCCCHHHHHHSCCB-----CCSCGGGTHHHHHHHHHHHHHHHHHHHTTTCCCCTTC
T ss_pred --cchhhhhhcCceeEEecCCcccCHHHHHHHHcChHH-----HHHHHhccCcchHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 223333444455678889999999999999998842 12233 2467889999999999999999 99999753
Q ss_pred CCchhhHHHHHHHHHHHHhhcCCC--C-CCchHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHhc
Q 012484 397 GPMDEDISRLKTTAVSVLNDLGCN--G-STLTEDLINEMCRFGAAELHAVAAFIGGVASQEVIKVVF 460 (462)
Q Consensus 397 ~~~~~D~~~l~~~~~~~~~~~~~~--~-~~i~~~~v~e~~r~~~~el~~vaa~~GGiaaQE~iK~i~ 460 (462)
++|++++.+++++++++.+.. . ..++++++++|+|++++||||||||+||+|||||||+||
T Consensus 307 ---~~D~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~el~pvaA~iGGivAQEVIKaiT 370 (1015)
T 3cmm_A 307 ---DEDANELIKLVTDLSVQQPEVLGEGVDVNEDLIKELSYQARGDIPGVVAFFGGLVAQEVLKACS 370 (1015)
T ss_dssp ---HHHHHHHHHHHHHHHHHCHHHHCTTCCCCHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHhcCCCccccccCcHHHHHHHHHhcCcccCcHHHHhcchHHHHHHHHhc
Confidence 789999999999998875432 1 368899999999999999999999999999999999987
No 3
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=100.00 E-value=4.7e-55 Score=438.60 Aligned_cols=304 Identities=25% Similarity=0.403 Sum_probs=245.4
Q ss_pred ccchhhhHHhhcCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHH
Q 012484 4 PKTKYDRQLRIWGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKS 83 (462)
Q Consensus 4 ~~~rYdRQl~l~G~~~q~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~ 83 (462)
+.+|||||+|+||.++|++|++++|+|+|+||+|+++||||+++|||+|||+|+|.|+.+||+|||+++++|+|++||++
T Consensus 15 ~~~rY~Rq~~l~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~ 94 (346)
T 1y8q_A 15 EAAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEA 94 (346)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHH
T ss_pred HHHHHHHHHHhhCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHH
Confidence 34699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCeEEEEecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEEEEeeccceEEEEEEeCC
Q 012484 84 VCAFLQELNDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGLTGFVRISVKE 163 (462)
Q Consensus 84 ~~~~l~~lNp~v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~~G~v~~~~~~ 163 (462)
++++|+++||+|+++++..... +...+++++||+||+|.++.+.+..++++|+++++|+|.+++.|++|++|+++++
T Consensus 95 ~~~~l~~lnp~v~v~~~~~~~~---~~~~~~~~~~dvVv~~~d~~~~r~~ln~~~~~~~ip~i~~~~~G~~G~v~~d~~~ 171 (346)
T 1y8q_A 95 SLERAQNLNPMVDVKVDTEDIE---KKPESFFTQFDAVCLTCCSRDVIVKVDQICHKNSIKFFTGDVFGYHGYTFANLGE 171 (346)
T ss_dssp HHHHHHHTCTTSEEEEECSCGG---GCCHHHHTTCSEEEEESCCHHHHHHHHHHHHHTTCEEEEEEEEBTEEEEEEECSE
T ss_pred HHHHHHhHCCCeEEEEEecccC---cchHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEeecccEEEEEEecCC
Confidence 9999999999999998876433 2356788999999999999999999999999999999999999999999999999
Q ss_pred ceeeecCCCCCCCCcccCCCCchhhhhhhcccCCCCCCCccCCCcHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Q 012484 164 HTVVESKPDHFLDDLRLNNPWPELRKFAETFDLNVPDPVAHKHTPYVVILIKMSEEWTNSHGGSLPSTREEKREFKELLK 243 (462)
Q Consensus 164 h~~~~~~~~~~~~~lrl~~p~p~l~~~~~~~d~~~~~~~~~~~~P~~v~l~~~~~~~~~~~~g~~p~~~~~~~~f~~~~~ 243 (462)
|++++.++++ +..|..+ .. ..++
T Consensus 172 ~~~~~~~~~~-------------------------------~~~p~~~---~~------~~~~----------------- 194 (346)
T 1y8q_A 172 HEFVEEKTKV-------------------------------AKVSQGV---ED------GPDT----------------- 194 (346)
T ss_dssp EEEEEECC------------------------------------------------------------------------
T ss_pred CCEEEcCCCC-------------------------------cCCCccc---cc------CCCC-----------------
Confidence 9988766542 0111100 00 0000
Q ss_pred hcccCCCCCCHHHHHHHhhcccCCCCccHHHHHHHhcCCCChhHHHHHhhhhhHHHHHhHHHHHHHHHHHHHhhCCCCCC
Q 012484 244 SKMVAIDEDNYKEAIEASFKVFAPPGIKLALSKVLQSADSSFFPFSIAIGRPWIFAEADCLAIEQRVRNNLKKLGREPES 323 (462)
Q Consensus 244 ~~~~~~~~~nf~EA~~~~~~~~~~~~i~~~i~~~~~~~~~~f~~l~~al~~iy~ka~~D~~~~~~~~~~~l~~~g~~~~~ 323 (462)
.+.||+ + +
T Consensus 195 ------~~~~~d-----------------------------------------------------------------~-~ 202 (346)
T 1y8q_A 195 ------KRAKLD-----------------------------------------------------------------S-S 202 (346)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------Cccccc-----------------------------------------------------------------C-C
Confidence 001110 0 0
Q ss_pred CCHHHHHHHHHhcccceEeeccccccccCCCChh-hHhhhhcccchhhHHHHHHHHHHHHHHHHHcCCCCCCCCCCchhh
Q 012484 324 ISKATIKSFCRNARKLKVCRYRLLEDEFSNPSVP-DIQKYLTDEDYSVAMGFYILLRAVDRFAANYNNYPGEFDGPMDED 402 (462)
Q Consensus 324 i~~~~i~~f~~n~~~~~~i~~~sl~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~l~a~~~F~~~~gr~P~~~~~~~~~D 402 (462)
..++..+.+.|.||++.+..|... .+. ...+++..+|++|||+++|.++|||+|++. ..++|
T Consensus 203 ----------~~~~~~~~~~f~~l~~~~~~~~~~~~~~-----~~~~r~~~~~~~~~al~~f~~~~~~~P~~~--~~~~d 265 (346)
T 1y8q_A 203 ----------ETTMVKKKVVFCPVKEALEVDWSSEKAK-----AALKRTTSDYFLLQVLLKFRTDKGRDPSSD--TYEED 265 (346)
T ss_dssp ----------CCCEEEEEEECCCHHHHTSCCSCSHHHH-----HHHTTSCTHHHHHHHHHHHHHHSSSCCCGG--GHHHH
T ss_pred ----------ceEEEeceeeccCHHHHhcCCchhhhhh-----hhcccccHHHHHHHHHHHHHHHhCCCCCCC--CCHHH
Confidence 123557778899998888776431 110 012445679999999999999999999731 23689
Q ss_pred HHHHHHHHHHHHhhcCCCCCCchHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHhc
Q 012484 403 ISRLKTTAVSVLNDLGCNGSTLTEDLINEMCRFGAAELHAVAAFIGGVASQEVIKVVF 460 (462)
Q Consensus 403 ~~~l~~~~~~~~~~~~~~~~~i~~~~v~e~~r~~~~el~~vaa~~GGiaaQE~iK~i~ 460 (462)
+++|.+++.+++++.+++...+++++++++ +++|||||||+||++||||||+||
T Consensus 266 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~----~~~l~pv~AiiGGi~aQEviK~it 319 (346)
T 1y8q_A 266 SELLLQIRNDVLDSLGISPDLLPEDFVRYC----FSEMAPVCAVVGGILAQEIVKALS 319 (346)
T ss_dssp HHHHHHHHHHHHHTTTCCGGGSCGGGGGSS----CSBCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCcccCCHHHHHHh----cCCccHHHHHHHHHHHHHHHHHhc
Confidence 999999999999888765445777776654 899999999999999999999997
No 4
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=100.00 E-value=1.1e-32 Score=282.78 Aligned_cols=158 Identities=22% Similarity=0.327 Sum_probs=143.3
Q ss_pred CccchhhhHHhhcCHHH-------------HH-HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcc
Q 012484 3 EPKTKYDRQLRIWGEQG-------------QA-ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNN 68 (462)
Q Consensus 3 ~~~~rYdRQl~l~G~~~-------------q~-~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~ 68 (462)
...+||+++-++|+.+| ++ .|++++|+|||+||+|++++++|+++|||+|+|+|+|.|+.+||+||
T Consensus 4 ~~~~r~~~vntl~~~~g~~~g~gf~~g~e~~~~~L~~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ 83 (434)
T 1tt5_B 4 DWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQ 83 (434)
T ss_dssp SCTTTTHHHHHHHHSCCSSCCTTCCCCSSHHHHHHHTCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTC
T ss_pred chhhhhccceEEEcCCCcccccccccCHHHHHHHhcCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCC
Confidence 34579999999987765 54 56999999999999999999999999999999999999999999999
Q ss_pred cccccccccccHHHHHHHHHHHhCCCCeEEEEecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHc-------
Q 012484 69 FMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREA------- 141 (462)
Q Consensus 69 f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~------- 141 (462)
|+++.+|+|++||++++++|+++||.++++.+..... +.+.+++++||+||+|.|+.+++..+|+.|+..
T Consensus 84 ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~~~i~---~~~~~~~~~~DlVi~~~Dn~~~R~~in~~c~~~~~~~~g~ 160 (434)
T 1tt5_B 84 FLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQ---DFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGV 160 (434)
T ss_dssp TTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEESCGG---GBCHHHHTTCSEEEECCSCHHHHHHHHHHHHHTCCBSSSC
T ss_pred cCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEecccc---hhhHHHhcCCCEEEECCCCHHHHHHHHHHHHHhhhccccc
Confidence 9999999999999999999999999999888765433 234578899999999999999999999999874
Q ss_pred -----CceEEEEeeccceEEEEEEeCC
Q 012484 142 -----NVMLIFARSYGLTGFVRISVKE 163 (462)
Q Consensus 142 -----~ip~i~~~~~G~~G~v~~~~~~ 163 (462)
++|+|++++.|+.|++++..|+
T Consensus 161 ~~~~~~iPli~~~~~g~~G~v~v~~p~ 187 (434)
T 1tt5_B 161 LDPSSIVPLIDGGTEGFKGNARVILPG 187 (434)
T ss_dssp BCGGGCCCEEEEEEETTEEEEEEECTT
T ss_pred cccccCCcEEEeccccceeEEEEECCC
Confidence 9999999999999999998876
No 5
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=100.00 E-value=4.3e-34 Score=274.47 Aligned_cols=158 Identities=18% Similarity=0.271 Sum_probs=144.2
Q ss_pred ccchhhhHHhh--cCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHH
Q 012484 4 PKTKYDRQLRI--WGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKA 81 (462)
Q Consensus 4 ~~~rYdRQl~l--~G~~~q~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka 81 (462)
+++||+||+++ ||.++|++|++++|+|+|+||+|++++++|+++||++|+|+|+|.|+.+||+||++++.+|+|++|+
T Consensus 5 e~~ry~Rq~~l~~~g~~~q~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka 84 (251)
T 1zud_1 5 DFMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKS 84 (251)
T ss_dssp HHHHTHHHHTSTTTHHHHHHHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHH
T ss_pred HHHHhhhhcchhhcCHHHHHHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHH
Confidence 45799999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCeEEEEecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEEEEeeccceEEEEEEe
Q 012484 82 KSVCAFLQELNDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGLTGFVRISV 161 (462)
Q Consensus 82 ~~~~~~l~~lNp~v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~~G~v~~~~ 161 (462)
++++++|+++||.++++.+...... ++..++++++|+||.|.++...+..+++.|+++++|+|++++.|+.|++++..
T Consensus 85 ~~~~~~l~~~np~~~v~~~~~~~~~--~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~~p~i~~~~~g~~G~v~~~~ 162 (251)
T 1zud_1 85 QVSQQRLTQLNPDIQLTALQQRLTG--EALKDAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGGQLMVLT 162 (251)
T ss_dssp HHHHHHHHHHCTTSEEEEECSCCCH--HHHHHHHHHCSEEEECCSSHHHHHHHHHHHHHTTCCEEEEEEEBTEEEEEEEC
T ss_pred HHHHHHHHHHCCCCEEEEEeccCCH--HHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHhCCCEEEEeccccceEEEEEc
Confidence 9999999999999999887653221 01134567899999999999999999999999999999999999999999866
Q ss_pred CC
Q 012484 162 KE 163 (462)
Q Consensus 162 ~~ 163 (462)
++
T Consensus 163 p~ 164 (251)
T 1zud_1 163 PP 164 (251)
T ss_dssp TT
T ss_pred cC
Confidence 54
No 6
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=100.00 E-value=4.2e-33 Score=271.22 Aligned_cols=167 Identities=18% Similarity=0.238 Sum_probs=121.2
Q ss_pred hhhhHHhh--cCH-HHHHHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHH
Q 012484 7 KYDRQLRI--WGE-QGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKS 83 (462)
Q Consensus 7 rYdRQl~l--~G~-~~q~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~ 83 (462)
-|+||+.| ||. ++|++|++++|+|||+||+|++++++|+++|||+|+|+|+|.|+.+||+||| ++.+|+|++|+++
T Consensus 15 ~y~r~i~L~~~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~-~~~~diG~~Ka~a 93 (292)
T 3h8v_A 15 VPRGSMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLF-FQPHQAGLSKVQA 93 (292)
T ss_dssp -----------------CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC-------------CCTTSBHHHH
T ss_pred CchHhhcccccChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhccccc-CChhhcCchHHHH
Confidence 59999988 998 9999999999999999999999999999999999999999999999999996 5889999999999
Q ss_pred HHHHHHHhCCCCeEEEEecChhhhhcCCcCCC-----------CCCcEEEEcCCChHHHHHHHHHHHHcCceEEEEeecc
Q 012484 84 VCAFLQELNDAVKAKFIEEYPEALIEMNPPFF-----------SQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYG 152 (462)
Q Consensus 84 ~~~~l~~lNp~v~v~~~~~~~~~~~~~~~~~~-----------~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G 152 (462)
++++|+++||+++++.+....... +...+++ +++|+||+|.|+.+++..+|+.|+++++|+|++++.|
T Consensus 94 a~~~L~~iNP~v~v~~~~~~l~~~-~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~~Pli~~gv~~ 172 (292)
T 3h8v_A 94 AEHTLRNINPDVLFEVHNYNITTV-ENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESGVSE 172 (292)
T ss_dssp HHHHHHHHCTTSEEEEECCCTTSH-HHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEECT
T ss_pred HHHHHHhhCCCcEEEEecccCCcH-HHHHHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhCCCEEEeeeec
Confidence 999999999999999887543210 0001122 6899999999999999999999999999999999975
Q ss_pred --ceEEEEEEeCCceeeecCCCCCCCCcccCCCCchh
Q 012484 153 --LTGFVRISVKEHTVVESKPDHFLDDLRLNNPWPEL 187 (462)
Q Consensus 153 --~~G~v~~~~~~h~~~~~~~~~~~~~lrl~~p~p~l 187 (462)
+.|++.+..|+. ..|+.|-||.+
T Consensus 173 ~~~~Gqv~~~~pg~------------t~Cy~Cl~p~~ 197 (292)
T 3h8v_A 173 NAVSGHIQLIIPGE------------SACFACAPPLV 197 (292)
T ss_dssp TSSEEEEEEECTTT------------SCCTTSSSCCC
T ss_pred ceeEEEEEEECCCC------------CCCHhhcCCcc
Confidence 899999887652 23666777743
No 7
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=99.98 E-value=8.5e-33 Score=265.22 Aligned_cols=158 Identities=20% Similarity=0.315 Sum_probs=143.6
Q ss_pred ccchhhhHHhh--cCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHH
Q 012484 4 PKTKYDRQLRI--WGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKA 81 (462)
Q Consensus 4 ~~~rYdRQl~l--~G~~~q~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka 81 (462)
+.+||+||+++ ||.++|++|++++|+|+|+||+|++++++|+++|+++|+|+|.|.|+++||+||++++.+|+|++|+
T Consensus 8 e~~ry~Rq~~l~~~g~~~q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka 87 (249)
T 1jw9_B 8 EMLRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKV 87 (249)
T ss_dssp HHHHTHHHHTSTTTHHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHH
T ss_pred HHHHhhheecccccCHHHHHHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHH
Confidence 34799999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCeEEEEecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEEEEeeccceEEEEEEe
Q 012484 82 KSVCAFLQELNDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGLTGFVRISV 161 (462)
Q Consensus 82 ~~~~~~l~~lNp~v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~~G~v~~~~ 161 (462)
+++++++.++||.++++.+....... ...+++.++|+||++.++.+.+..+++.|++.++|+|++++.|+.|++++..
T Consensus 88 ~~~~~~l~~~np~~~v~~~~~~~~~~--~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p~i~~~~~g~~g~v~~~~ 165 (249)
T 1jw9_B 88 ESARDALTRINPHIAITPVNALLDDA--ELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQITVFT 165 (249)
T ss_dssp HHHHHHHHHHCTTSEEEEECSCCCHH--HHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEEBTEEEEEEEC
T ss_pred HHHHHHHHHHCCCcEEEEEeccCCHh--HHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEeeeccceEEEEEEe
Confidence 99999999999999988876433210 1124577899999999999999999999999999999999999999998875
Q ss_pred CC
Q 012484 162 KE 163 (462)
Q Consensus 162 ~~ 163 (462)
++
T Consensus 166 p~ 167 (249)
T 1jw9_B 166 YQ 167 (249)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 8
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=99.97 E-value=2.9e-31 Score=281.31 Aligned_cols=152 Identities=27% Similarity=0.344 Sum_probs=138.7
Q ss_pred HHhhcCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHH
Q 012484 11 QLRIWGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQE 90 (462)
Q Consensus 11 Ql~l~G~~~q~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~ 90 (462)
|+++||.++|++|++++|+|||+||+||++|+||+++|||+|+|+|+|.|+.+||+|||+++.+|||++||++++++|++
T Consensus 3 qi~l~G~e~Q~kL~~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~ 82 (640)
T 1y8q_B 3 LSRGLPRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQ 82 (640)
T ss_dssp ---CCCHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHT
T ss_pred hhhhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCeEEEEecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEEEEeeccceEEEEEEeCC
Q 012484 91 LNDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGLTGFVRISVKE 163 (462)
Q Consensus 91 lNp~v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~~G~v~~~~~~ 163 (462)
+||+++++++....... ....+++.+||+||+|.++...+..+++.|+.+++|+|.+++.|+.|++++..|+
T Consensus 83 iNP~v~V~a~~~~i~~~-~~~~~~~~~~DlVvda~Dn~~aR~~ln~~c~~~~iPlI~~g~~G~~G~v~vi~p~ 154 (640)
T 1y8q_B 83 FYPKANIVAYHDSIMNP-DYNVEFFRQFILVMNALDNRAARNHVNRMCLAADVPLIESGTAGYLGQVTTIKKG 154 (640)
T ss_dssp TCTTCEEEEEESCTTST-TSCHHHHTTCSEEEECCSCHHHHHHHHHHHHHHTCCEEEEEEETTEEEEEEECTT
T ss_pred HCCCCeEEEEecccchh-hhhHhhhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEEEecccceEEEECCC
Confidence 99999999887643210 1124678999999999999999999999999999999999999999999999876
No 9
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.8e-31 Score=297.28 Aligned_cols=159 Identities=23% Similarity=0.371 Sum_probs=147.0
Q ss_pred cchhhhHHhhcCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHhCC-----CeEEEEeCCcccccCCCccccccccccccc
Q 012484 5 KTKYDRQLRIWGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGI-----GSITVIDGSKVEVGDLGNNFMLDESCVGES 79 (462)
Q Consensus 5 ~~rYdRQl~l~G~~~q~~L~~~~VlivG~g~lG~eiaknLvl~Gv-----~~itlvD~d~v~~~nl~r~f~~~~~dvG~~ 79 (462)
++||+||+++||.++|++|++++|+|||+||+||++++||+++|| |+|+|+|.|.|+.+||+|||+++.+|||++
T Consensus 405 ~~Ry~rq~~l~G~~~q~kL~~~~VlvVGaGGlGsevlk~La~~Gv~~g~~G~i~lvD~D~Ve~SNLnRQ~lf~~~dvG~~ 484 (1015)
T 3cmm_A 405 NSRYDNQIAVFGLDFQKKIANSKVFLVGSGAIGCEMLKNWALLGLGSGSDGYIVVTDNDSIEKSNLNRQFLFRPKDVGKN 484 (1015)
T ss_dssp SSTTHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTTTCSTTCEEEEECCCBCCGGGTTTCTTCCGGGTTSB
T ss_pred hhhhhhHHHhcCHHHHHHHhcCeEEEEecCHHHHHHHHHHHHcCcCcCCCCeEEEEeCCEeccccccccccCChhhCCCH
Confidence 479999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCC--eEEEEecChhhhhc--CCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEEEEeeccceE
Q 012484 80 KAKSVCAFLQELNDAV--KAKFIEEYPEALIE--MNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGLTG 155 (462)
Q Consensus 80 Ka~~~~~~l~~lNp~v--~v~~~~~~~~~~~~--~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~~G 155 (462)
||++++++++++||.+ +++.+......-.. .+.++++++|+||+|.|+.+++..+++.|+.+++|+|.+++.|+.|
T Consensus 485 Ka~~aa~~l~~iNP~v~~~v~~~~~~i~~~~~~~~~~~~~~~~D~Vi~a~Dn~~aR~~ln~~c~~~~~Pli~~g~~G~~G 564 (1015)
T 3cmm_A 485 KSEVAAEAVCAMNPDLKGKINAKIDKVGPETEEIFNDSFWESLDFVTNALDNVDARTYVDRRCVFYRKPLLESGTLGTKG 564 (1015)
T ss_dssp HHHHHHHHHHHHCGGGTTTEEEECCCCSGGGTTTSCHHHHHHCSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEETTEE
T ss_pred HHHHHHHHHHHHCCCCcceEEEEecccCchhhhhccHhhhccCCEEEECCCCHHHHHHHHHHHHHcCCcEEEeCCCcccc
Confidence 9999999999999999 99988764432111 1245678999999999999999999999999999999999999999
Q ss_pred EEEEEeCC
Q 012484 156 FVRISVKE 163 (462)
Q Consensus 156 ~v~~~~~~ 163 (462)
++.+..|+
T Consensus 565 ~v~v~~p~ 572 (1015)
T 3cmm_A 565 NTQVIIPR 572 (1015)
T ss_dssp EEEEECTT
T ss_pred ceEEEeCC
Confidence 99998876
No 10
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=99.97 E-value=2.4e-30 Score=287.29 Aligned_cols=150 Identities=23% Similarity=0.287 Sum_probs=138.7
Q ss_pred HhhcCHHHHHHH-hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHH
Q 012484 12 LRIWGEQGQAAL-EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQE 90 (462)
Q Consensus 12 l~l~G~~~q~~L-~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~ 90 (462)
-..+|.++|+++ ++++|+|||+||+||+++++|+++|||+|+|+|+|.|+.+||+|||+++.+|||++||++++++|++
T Consensus 397 ~~~~g~~~~~~~l~~~~vlvvG~GglG~~~~~~L~~~Gvg~i~l~D~d~v~~snl~rq~~~~~~~vg~~Ka~~~~~~l~~ 476 (805)
T 2nvu_B 397 DFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLND 476 (805)
T ss_dssp TCCCCSHHHHHHHHTCCEEEECCSSHHHHHHHHHHTTTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCcEEEECCCeecccccccccccchhhcCChHHHHHHHHHHH
Confidence 346899999988 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCeEEEEecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHH------------cCceEEEEeeccceEEEE
Q 012484 91 LNDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICRE------------ANVMLIFARSYGLTGFVR 158 (462)
Q Consensus 91 lNp~v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~------------~~ip~i~~~~~G~~G~v~ 158 (462)
+||.++++.+..... +.+.+++++||+||+|.|+.+.+..+|+.|+. +++|+|++++.|+.|+++
T Consensus 477 ~np~~~v~~~~~~~~---~~~~~~~~~~d~vv~~~d~~~~r~~in~~~~~~~~~~~g~~~~~~~~p~i~~~~~g~~G~~~ 553 (805)
T 2nvu_B 477 RVPNCNVVPHFNKIQ---DFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNAR 553 (805)
T ss_dssp HSTTCEEEEEESCGG---GSCHHHHHTCSEEEECCSCHHHHHHHHHHHHHTCCEETTEECGGGCCCEEEEEEETTEEEEE
T ss_pred HCCCCEEEEEecccc---ccHHHHHhcCCEEEECCCCHHHHHHHHHHHHHHhhccccccccccCCcEEEeccccCceeEE
Confidence 999999988776543 33567888999999999999999999999988 499999999999999999
Q ss_pred EEeCCc
Q 012484 159 ISVKEH 164 (462)
Q Consensus 159 ~~~~~h 164 (462)
++.|++
T Consensus 554 ~~~p~~ 559 (805)
T 2nvu_B 554 VILPGM 559 (805)
T ss_dssp EECTTT
T ss_pred EECCCC
Confidence 998763
No 11
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=99.97 E-value=1.5e-30 Score=261.51 Aligned_cols=208 Identities=18% Similarity=0.181 Sum_probs=160.1
Q ss_pred CccchhhhHHh---hcCH--HH-HHHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccc
Q 012484 3 EPKTKYDRQLR---IWGE--QG-QAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCV 76 (462)
Q Consensus 3 ~~~~rYdRQl~---l~G~--~~-q~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dv 76 (462)
.+.+||+||+. +||. ++ |++|++++|+|+|+||+|++++++|+++|||+|+|+|+|.|+.+||+||++++.+|+
T Consensus 90 ~~~~rY~Rq~~~~~~~g~~~~~~q~~L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~di 169 (353)
T 3h5n_A 90 TENNRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDV 169 (353)
T ss_dssp CTTSTTHHHHHHHHHTTCCHHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGT
T ss_pred HHHHHhhhhhhhhhccCCChHHHHHHHhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHC
Confidence 56789999976 5774 56 999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHhCCCCeEEEEecChhhhhcCCcCCCCCCcEEEEcCCChH-HHHHHHHHHHHcCceEEEEeeccceE
Q 012484 77 GESKAKSVCAFLQELNDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEE-KMIKLDRICREANVMLIFARSYGLTG 155 (462)
Q Consensus 77 G~~Ka~~~~~~l~~lNp~v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~-~~~~l~~~~~~~~ip~i~~~~~G~~G 155 (462)
|++|+++++++|+++||.++++.+........+ ..+ ++++|+||+|.++.. .+..+|+.|+++++|+|.+++.|..|
T Consensus 170 G~~Ka~~~~~~l~~~np~v~v~~~~~~i~~~~~-~~~-~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p~i~~~~~g~~g 247 (353)
T 3h5n_A 170 GKNKTEVIKRELLKRNSEISVSEIALNINDYTD-LHK-VPEADIWVVSADHPFNLINWVNKYCVRANQPYINAGYVNDIA 247 (353)
T ss_dssp TSBHHHHHHHHHHHHCTTSEEEEEECCCCSGGG-GGG-SCCCSEEEECCCCSTTHHHHHHHHHHHTTCCEEEEEEETTEE
T ss_pred CChHHHHHHHHHHHHCCCCeEEEeecccCchhh-hhH-hccCCEEEEecCChHHHHHHHHHHHHHhCCCEEEEEEeCCEE
Confidence 999999999999999999999988764432211 123 889999999999888 99999999999999999999999999
Q ss_pred EEEEE-eCCceeeecCCCCCCCCcccCCCCc--hhhhh-----hhcccC--CCCCCCccCCCcHHHHHHHHHHHHHHhc
Q 012484 156 FVRIS-VKEHTVVESKPDHFLDDLRLNNPWP--ELRKF-----AETFDL--NVPDPVAHKHTPYVVILIKMSEEWTNSH 224 (462)
Q Consensus 156 ~v~~~-~~~h~~~~~~~~~~~~~lrl~~p~p--~l~~~-----~~~~d~--~~~~~~~~~~~P~~v~l~~~~~~~~~~~ 224 (462)
++... .|+. ..|+.|-|| .+... .+.++. ........+.++.++..+.+.+.+|-..
T Consensus 248 ~~g~~~~p~~------------~~C~~C~~~~~~~~~~~~~~~~~~c~~~~~~~~~gv~~~~~~iig~l~a~Ealk~l~ 314 (353)
T 3h5n_A 248 VFGPLYVPGK------------TGCYECQKVVADLYGSEKENIDHKIKLINSRFKPATFAPVNNVAAALCAADVIKFIG 314 (353)
T ss_dssp EEEEEECTTT------------SCCTTTTC---------CHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCC------------CCChhhcCCCcCCCccccchhhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHHhc
Confidence 88643 2331 225555554 22211 111110 0112233445566777777777766443
No 12
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=99.96 E-value=4.4e-29 Score=246.62 Aligned_cols=151 Identities=16% Similarity=0.172 Sum_probs=134.9
Q ss_pred HHhhcCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHH
Q 012484 11 QLRIWGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQE 90 (462)
Q Consensus 11 Ql~l~G~~~q~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~ 90 (462)
..|+|+..++++|++++|+|+|+||+||+++++|+++|||+|+|+|+|.|+.+|++|||+++.+|+|++|+++++++|++
T Consensus 20 ~wRll~~~g~~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~ 99 (340)
T 3rui_A 20 KWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKR 99 (340)
T ss_dssp HHHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHH
T ss_pred HHhhcchhhHHHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHH
Confidence 34889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCeEEEEecCh------------hhhh-cCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEEEEeeccceEEE
Q 012484 91 LNDAVKAKFIEEYP------------EALI-EMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGLTGFV 157 (462)
Q Consensus 91 lNp~v~v~~~~~~~------------~~~~-~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~~G~v 157 (462)
+||.++++.+.... ..+. ++..++++++|+||.|.++.+++..+++.|+.+++|+|.++ .|+.|++
T Consensus 100 inP~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~tR~lin~~c~~~~~plI~aa-~G~~G~l 178 (340)
T 3rui_A 100 IFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAA-LGFDSYL 178 (340)
T ss_dssp HCTTCEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTGGGHHHHHHHHHTTCEEEEEE-ECSSEEE
T ss_pred hCCCCEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHHHHHHHHHHHHHcCCcEEEee-ecceEEE
Confidence 99999999876421 0111 11235678999999999999999999999999999999975 9999999
Q ss_pred EEEeC
Q 012484 158 RISVK 162 (462)
Q Consensus 158 ~~~~~ 162 (462)
++..+
T Consensus 179 ~v~~g 183 (340)
T 3rui_A 179 VMRHG 183 (340)
T ss_dssp EEECC
T ss_pred EEeec
Confidence 88653
No 13
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=99.95 E-value=2.3e-28 Score=256.23 Aligned_cols=155 Identities=15% Similarity=0.166 Sum_probs=138.3
Q ss_pred chhhhHHhh-------cCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccc
Q 012484 6 TKYDRQLRI-------WGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGE 78 (462)
Q Consensus 6 ~rYdRQl~l-------~G~~~q~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~ 78 (462)
.+|+||++| |+..+|++|++++|+|||+||+|+++|++|+++|||+|+|+|+|.|+.+||+||++++.+|+|+
T Consensus 301 a~~~~~lnL~lmrwrll~~~gq~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~ 380 (598)
T 3vh1_A 301 ADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGK 380 (598)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSS
T ss_pred HHHHHhhhhhhhhhhccchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCc
Confidence 589999987 6778899999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHhCCCCeEEEEecCh------------hhhh-cCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceE
Q 012484 79 SKAKSVCAFLQELNDAVKAKFIEEYP------------EALI-EMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVML 145 (462)
Q Consensus 79 ~Ka~~~~~~l~~lNp~v~v~~~~~~~------------~~~~-~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~ 145 (462)
+||++++++|+++||.++++.+.... ..+. ++..++++++|+||+|+++.+.+..+++.|+.+++|+
T Consensus 381 ~KAeaaa~~L~~iNP~v~v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatDn~~tR~lin~~c~~~~~pl 460 (598)
T 3vh1_A 381 PKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTV 460 (598)
T ss_dssp BHHHHHHHHHHHHCTTCEEEEECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCSBGGGTHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHhHCCCcEEEEEeccccccCcccccccccccCHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999999876431 0111 1113567889999999999999999999999999999
Q ss_pred EEEeeccceEEEEEEe
Q 012484 146 IFARSYGLTGFVRISV 161 (462)
Q Consensus 146 i~~~~~G~~G~v~~~~ 161 (462)
|.+ +.|+.|++++..
T Consensus 461 I~a-a~G~~Gqv~v~~ 475 (598)
T 3vh1_A 461 INA-ALGFDSYLVMRH 475 (598)
T ss_dssp EEE-EECSSEEEEEEE
T ss_pred EEE-EECCccEEEEEc
Confidence 986 799999998754
No 14
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=99.95 E-value=2.8e-28 Score=255.52 Aligned_cols=149 Identities=16% Similarity=0.158 Sum_probs=134.1
Q ss_pred hhcCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhC
Q 012484 13 RIWGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELN 92 (462)
Q Consensus 13 ~l~G~~~q~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lN 92 (462)
|+|+..++++|++++|+|||+||+||++|++|+++|||+|+|+|+|.|+.+||+||++++.+|+|++||++++++|+++|
T Consensus 314 Rllp~~g~ekL~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iN 393 (615)
T 4gsl_A 314 RILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIF 393 (615)
T ss_dssp HTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHC
T ss_pred hhcchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEecCh------------hhhhc-CCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEEEEeeccceEEEEE
Q 012484 93 DAVKAKFIEEYP------------EALIE-MNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGLTGFVRI 159 (462)
Q Consensus 93 p~v~v~~~~~~~------------~~~~~-~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~~G~v~~ 159 (462)
|.++++.+.... ..+.. ...+++.++|+||+|.|+.+++..+++.|+.+++|+|.++ .|+.|++.+
T Consensus 394 P~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~~tR~~ln~~c~~~~~PlI~aa-lG~~Gql~v 472 (615)
T 4gsl_A 394 PLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAA-LGFDSYLVM 472 (615)
T ss_dssp TTCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSGGGTHHHHHHHHHTTCEEEEEE-ECSSEEEEE
T ss_pred CCcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCHHHHHHHHHHHHHcCCeEEEEE-ccceeEEEE
Confidence 999999876421 11111 1235678999999999999999999999999999999975 999999987
Q ss_pred EeC
Q 012484 160 SVK 162 (462)
Q Consensus 160 ~~~ 162 (462)
..+
T Consensus 473 ~~g 475 (615)
T 4gsl_A 473 RHG 475 (615)
T ss_dssp ECC
T ss_pred eec
Confidence 653
No 15
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.51 E-value=0.00019 Score=66.57 Aligned_cols=96 Identities=13% Similarity=0.180 Sum_probs=66.0
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEe
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIE 101 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~ 101 (462)
.|++.+|+|||.|.+|...++.|..+|. .+++++++.-. . + +.+.+ ...+. .+.
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~~------------------~---l-~~l~~-~~~i~--~i~ 81 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVSA------------------E---I-NEWEA-KGQLR--VKR 81 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCCH------------------H---H-HHHHH-TTSCE--EEC
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCCH------------------H---H-HHHHH-cCCcE--EEE
Confidence 5789999999999999999999999997 69999864210 0 1 12222 12333 332
Q ss_pred cChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEEEEee
Q 012484 102 EYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARS 150 (462)
Q Consensus 102 ~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~ 150 (462)
.. + .++.+.++|+||+++++...-..+...|+ .++|+-.+..
T Consensus 82 ~~---~---~~~dL~~adLVIaAT~d~~~N~~I~~~ak-~gi~VNvvD~ 123 (223)
T 3dfz_A 82 KK---V---GEEDLLNVFFIVVATNDQAVNKFVKQHIK-NDQLVNMASS 123 (223)
T ss_dssp SC---C---CGGGSSSCSEEEECCCCTHHHHHHHHHSC-TTCEEEC---
T ss_pred CC---C---CHhHhCCCCEEEECCCCHHHHHHHHHHHh-CCCEEEEeCC
Confidence 21 1 23456789999998888788788888898 8998555443
No 16
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.35 E-value=0.00065 Score=58.97 Aligned_cols=100 Identities=19% Similarity=0.155 Sum_probs=60.5
Q ss_pred HHHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEE
Q 012484 20 QAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKF 99 (462)
Q Consensus 20 q~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~ 99 (462)
-.++.+.+|+|+|+|.+|..+++.|...|. .++++|.+.-....+... ..+.+
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~------------------------~g~~~-- 66 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSE------------------------FSGFT-- 66 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTT------------------------CCSEE--
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhc------------------------CCCcE--
Confidence 356778899999999999999999999997 799998654222211100 01111
Q ss_pred EecC---hhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHH-cCceEEEEe
Q 012484 100 IEEY---PEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICRE-ANVMLIFAR 149 (462)
Q Consensus 100 ~~~~---~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~-~~ip~i~~~ 149 (462)
+..+ ...+.. .-+.++|+||.+..+......+...++. .+...+.+.
T Consensus 67 ~~~d~~~~~~l~~---~~~~~ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~ 117 (155)
T 2g1u_A 67 VVGDAAEFETLKE---CGMEKADMVFAFTNDDSTNFFISMNARYMFNVENVIAR 117 (155)
T ss_dssp EESCTTSHHHHHT---TTGGGCSEEEECSSCHHHHHHHHHHHHHTSCCSEEEEE
T ss_pred EEecCCCHHHHHH---cCcccCCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEEE
Confidence 1111 111110 1145789999998887766667777776 554444433
No 17
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.25 E-value=0.00023 Score=68.58 Aligned_cols=80 Identities=16% Similarity=0.187 Sum_probs=61.0
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEe
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIE 101 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~ 101 (462)
.+++++|+|+|+||+|..++..|...|+++++|++.+ ..|++.+++.+....|.+.+....
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~-------------------~~~a~~la~~~~~~~~~~~i~~~~ 184 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD-------------------TSRAQALADVINNAVGREAVVGVD 184 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS-------------------HHHHHHHHHHHHHHHTSCCEEEEC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC-------------------HHHHHHHHHHHHhhcCCceEEEcC
Confidence 3668899999999999999999999999999998643 248888888888887777766543
Q ss_pred cChhhhhcCCcCCCCCCcEEEEcCC
Q 012484 102 EYPEALIEMNPPFFSQFTLVVATQL 126 (462)
Q Consensus 102 ~~~~~~~~~~~~~~~~~dvVi~~~~ 126 (462)
. +++ .+.+.++|+||.|+.
T Consensus 185 ~--~~l----~~~l~~~DiVInaTp 203 (283)
T 3jyo_A 185 A--RGI----EDVIAAADGVVNATP 203 (283)
T ss_dssp S--TTH----HHHHHHSSEEEECSS
T ss_pred H--HHH----HHHHhcCCEEEECCC
Confidence 1 111 122457899998764
No 18
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.25 E-value=0.0012 Score=56.14 Aligned_cols=96 Identities=16% Similarity=0.218 Sum_probs=60.2
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEec
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 102 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~ 102 (462)
+...+|+|+|+|.+|..+++.|...|. +++++|.+. .++ +.+.+. .+.+ +..
T Consensus 4 ~~~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~-------------------~~~----~~~~~~--~~~~--~~g 55 (141)
T 3llv_A 4 NGRYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSK-------------------EKI----ELLEDE--GFDA--VIA 55 (141)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCH-------------------HHH----HHHHHT--TCEE--EEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCH-------------------HHH----HHHHHC--CCcE--EEC
Confidence 345789999999999999999999997 688988532 122 222222 2332 222
Q ss_pred Chh--hhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEEEE
Q 012484 103 YPE--ALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFA 148 (462)
Q Consensus 103 ~~~--~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~ 148 (462)
+.. .... ..-+.++|+||.+..+......+...+++.+.+.|.+
T Consensus 56 d~~~~~~l~--~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~~~~~iia 101 (141)
T 3llv_A 56 DPTDESFYR--SLDLEGVSAVLITGSDDEFNLKILKALRSVSDVYAIV 101 (141)
T ss_dssp CTTCHHHHH--HSCCTTCSEEEECCSCHHHHHHHHHHHHHHCCCCEEE
T ss_pred CCCCHHHHH--hCCcccCCEEEEecCCHHHHHHHHHHHHHhCCceEEE
Confidence 211 1111 1124589999988887777677777888776554443
No 19
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.20 E-value=0.0015 Score=55.03 Aligned_cols=36 Identities=17% Similarity=0.290 Sum_probs=29.8
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
++...+|+|+|+|.+|..+++.|...|. +++++|.+
T Consensus 3 ~~~~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~ 38 (144)
T 2hmt_A 3 RIKNKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDIN 38 (144)
T ss_dssp ---CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESC
T ss_pred CCcCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 4567889999999999999999999996 58888854
No 20
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.17 E-value=0.0014 Score=53.30 Aligned_cols=94 Identities=16% Similarity=0.156 Sum_probs=61.8
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecC-
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY- 103 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~- 103 (462)
..+|+|+|+|++|..+++.|...|..+++++|.+. .|.+. +. .+.+.....+..
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~-------------------~~~~~----~~--~~~~~~~~~d~~~ 59 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL-------------------AALAV----LN--RMGVATKQVDAKD 59 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH-------------------HHHHH----HH--TTTCEEEECCTTC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH-------------------HHHHH----HH--hCCCcEEEecCCC
Confidence 45899999999999999999999977899987431 12222 11 334443222211
Q ss_pred hhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEEEE
Q 012484 104 PEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFA 148 (462)
Q Consensus 104 ~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~ 148 (462)
...+ .+.+.++|+||.+.. ......+.+.|.+.+++++..
T Consensus 60 ~~~~----~~~~~~~d~vi~~~~-~~~~~~~~~~~~~~g~~~~~~ 99 (118)
T 3ic5_A 60 EAGL----AKALGGFDAVISAAP-FFLTPIIAKAAKAAGAHYFDL 99 (118)
T ss_dssp HHHH----HHHTTTCSEEEECSC-GGGHHHHHHHHHHTTCEEECC
T ss_pred HHHH----HHHHcCCCEEEECCC-chhhHHHHHHHHHhCCCEEEe
Confidence 1111 134568999998874 344567788899999887653
No 21
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.04 E-value=0.0019 Score=54.24 Aligned_cols=88 Identities=17% Similarity=0.099 Sum_probs=54.0
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecCh-
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYP- 104 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~~- 104 (462)
.+|+|+|+|.+|..+++.|...|. +++++|.+. .+++ .+.+.. .+.+ +..+.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~-------------------~~~~----~~~~~~-~~~~--~~~d~~ 57 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDK-------------------DICK----KASAEI-DALV--INGDCT 57 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCH-------------------HHHH----HHHHHC-SSEE--EESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCH-------------------HHHH----HHHHhc-CcEE--EEcCCC
Confidence 589999999999999999999995 688888432 1121 222211 2221 22111
Q ss_pred --hhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCc
Q 012484 105 --EALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANV 143 (462)
Q Consensus 105 --~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~i 143 (462)
..+. ...+.++|+||.+..+......+...++..+.
T Consensus 58 ~~~~l~---~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~ 95 (140)
T 1lss_A 58 KIKTLE---DAGIEDADMYIAVTGKEEVNLMSSLLAKSYGI 95 (140)
T ss_dssp SHHHHH---HTTTTTCSEEEECCSCHHHHHHHHHHHHHTTC
T ss_pred CHHHHH---HcCcccCCEEEEeeCCchHHHHHHHHHHHcCC
Confidence 1111 11256899999888776555556667776654
No 22
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.88 E-value=0.0032 Score=60.09 Aligned_cols=74 Identities=24% Similarity=0.327 Sum_probs=58.0
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEec
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 102 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~ 102 (462)
++.++++|+|+||.+..++-.|...|+.+++|++.+ ..|++.+++.+....|...+..
T Consensus 123 ~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt-------------------~~ra~~la~~~~~~~~~~~~~~--- 180 (269)
T 3tum_A 123 PAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPS-------------------TARMGAVCELLGNGFPGLTVST--- 180 (269)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSC-------------------HHHHHHHHHHHHHHCTTCEEES---
T ss_pred cccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCC-------------------HHHHHHHHHHHhccCCcceehh---
Confidence 456899999999999999999999999999998632 2488888899988888765321
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCC
Q 012484 103 YPEALIEMNPPFFSQFTLVVATQL 126 (462)
Q Consensus 103 ~~~~~~~~~~~~~~~~dvVi~~~~ 126 (462)
...-+.++|+||.|+.
T Consensus 181 --------~~~~~~~~dliiNaTp 196 (269)
T 3tum_A 181 --------QFSGLEDFDLVANASP 196 (269)
T ss_dssp --------CCSCSTTCSEEEECSS
T ss_pred --------hhhhhhcccccccCCc
Confidence 1123557899998763
No 23
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.76 E-value=0.0025 Score=54.97 Aligned_cols=93 Identities=14% Similarity=0.099 Sum_probs=58.7
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHH-hCCCCeEEEEec
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQE-LNDAVKAKFIEE 102 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~-lNp~v~v~~~~~ 102 (462)
.+.+|+|+|+|.+|..+++.|...|. .++++|.+.- .+++ .+.+ +...+.+ +..
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~------------------~~~~----~~~~~~~~~~~~--i~g 56 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPE------------------DDIK----QLEQRLGDNADV--IPG 56 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCH------------------HHHH----HHHHHHCTTCEE--EES
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCCh------------------HHHH----HHHHhhcCCCeE--EEc
Confidence 46789999999999999999999996 6999885421 0111 2222 2223443 322
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHc
Q 012484 103 YPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREA 141 (462)
Q Consensus 103 ~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~ 141 (462)
+..+.......-+.++|+||++..+...-..+...+++.
T Consensus 57 d~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~ 95 (153)
T 1id1_A 57 DSNDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDM 95 (153)
T ss_dssp CTTSHHHHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHcChhhCCEEEEecCChHHHHHHHHHHHHH
Confidence 221100001112568999999988777777777788876
No 24
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.69 E-value=0.0031 Score=57.85 Aligned_cols=95 Identities=9% Similarity=0.050 Sum_probs=58.3
Q ss_pred cEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecChhh
Q 012484 27 SVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYPEA 106 (462)
Q Consensus 27 ~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~~~~ 106 (462)
+|+|+|+|.+|..+++.|...|. .++++|.+.- +++ .+.+. ..+.+ +..+..+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~-------------------~~~----~l~~~-~~~~~--i~gd~~~ 54 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRE-------------------LCE----EFAKK-LKATI--IHGDGSH 54 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHH-------------------HHH----HHHHH-SSSEE--EESCTTS
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHH-------------------HHH----HHHHH-cCCeE--EEcCCCC
Confidence 69999999999999999999997 6889884321 222 22221 12332 3222211
Q ss_pred hhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHH-cCceEEEE
Q 012484 107 LIEMNPPFFSQFTLVVATQLGEEKMIKLDRICRE-ANVMLIFA 148 (462)
Q Consensus 107 ~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~-~~ip~i~~ 148 (462)
.......-+.++|+||++..+......+...+++ ++.+-+.+
T Consensus 55 ~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 55 KEILRDAEVSKNDVVVILTPRDEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp HHHHHHHTCCTTCEEEECCSCHHHHHHHHHHHHHTSCCCEEEE
T ss_pred HHHHHhcCcccCCEEEEecCCcHHHHHHHHHHHHHcCCCeEEE
Confidence 1000111256899999988887776677777776 45544443
No 25
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.69 E-value=0.0028 Score=61.94 Aligned_cols=83 Identities=12% Similarity=0.147 Sum_probs=57.7
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEec
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 102 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~ 102 (462)
+++++|+|+|+||+|..++..|+..|+++++|++.+.- -..|++.+++.+.+..+ +.+..+..
T Consensus 152 l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~----------------~~~~a~~la~~~~~~~~-~~~~~~~~ 214 (315)
T 3tnl_A 152 IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDD----------------FYANAEKTVEKINSKTD-CKAQLFDI 214 (315)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSST----------------THHHHHHHHHHHHHHSS-CEEEEEET
T ss_pred ccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCc----------------hHHHHHHHHHHhhhhcC-CceEEecc
Confidence 56789999999999999999999999999999974310 02477877777776554 44544432
Q ss_pred Ch-hhhhcCCcCCCCCCcEEEEcCC
Q 012484 103 YP-EALIEMNPPFFSQFTLVVATQL 126 (462)
Q Consensus 103 ~~-~~~~~~~~~~~~~~dvVi~~~~ 126 (462)
.. ..+ .+.+.++|+||.|+.
T Consensus 215 ~~~~~l----~~~l~~aDiIINaTp 235 (315)
T 3tnl_A 215 EDHEQL----RKEIAESVIFTNATG 235 (315)
T ss_dssp TCHHHH----HHHHHTCSEEEECSS
T ss_pred chHHHH----HhhhcCCCEEEECcc
Confidence 11 111 123457899998764
No 26
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.66 E-value=0.0066 Score=62.44 Aligned_cols=99 Identities=9% Similarity=0.133 Sum_probs=67.8
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEec
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 102 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~ 102 (462)
|++.+|+|+|.|.+|...++.|...|. +++++|++... .+ ..+.+ ...++ .+..
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ga-~V~vi~~~~~~---------------------~~-~~l~~-~~~i~--~~~~ 63 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIP---------------------QF-TVWAN-EGMLT--LVEG 63 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCH---------------------HH-HHHHT-TTSCE--EEES
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcC-EEEEEcCCCCH---------------------HH-HHHHh-cCCEE--EEEC
Confidence 678999999999999999999999995 69999964211 00 11111 12333 3322
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEEEEeeccc
Q 012484 103 YPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGL 153 (462)
Q Consensus 103 ~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~ 153 (462)
. + .++.+.++|+||++++.......+...|++.++|+-.++.-.+
T Consensus 64 ~---~---~~~~l~~~~lVi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~ 108 (457)
T 1pjq_A 64 P---F---DETLLDSCWLAIAATDDDTVNQRVSDAAESRRIFCNVVDAPKA 108 (457)
T ss_dssp S---C---CGGGGTTCSEEEECCSCHHHHHHHHHHHHHTTCEEEETTCTTS
T ss_pred C---C---CccccCCccEEEEcCCCHHHHHHHHHHHHHcCCEEEECCCccc
Confidence 1 1 2234568999999888877777888999999999544444333
No 27
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.50 E-value=0.0043 Score=60.48 Aligned_cols=84 Identities=12% Similarity=0.103 Sum_probs=56.1
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEec
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 102 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~ 102 (462)
+++++|+|+|+||+|..++..|...|+++++|++.+.- ...|++.+++.+....+ ..+.....
T Consensus 146 l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~----------------~~~~a~~la~~~~~~~~-~~v~~~~~ 208 (312)
T 3t4e_A 146 MRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDD----------------FFEKAVAFAKRVNENTD-CVVTVTDL 208 (312)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSST----------------HHHHHHHHHHHHHHHSS-CEEEEEET
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCc----------------hHHHHHHHHHHhhhccC-cceEEech
Confidence 56789999999999999999999999999999864310 02477777777776543 34443332
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCC
Q 012484 103 YPEALIEMNPPFFSQFTLVVATQL 126 (462)
Q Consensus 103 ~~~~~~~~~~~~~~~~dvVi~~~~ 126 (462)
..... ..+.+.++|+||.|+.
T Consensus 209 ~~l~~---~~~~l~~~DiIINaTp 229 (312)
T 3t4e_A 209 ADQHA---FTEALASADILTNGTK 229 (312)
T ss_dssp TCHHH---HHHHHHHCSEEEECSS
T ss_pred Hhhhh---hHhhccCceEEEECCc
Confidence 11000 0112456889987764
No 28
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.47 E-value=0.011 Score=52.54 Aligned_cols=93 Identities=14% Similarity=0.000 Sum_probs=56.5
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHh-CCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEe
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLG-GIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIE 101 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~-Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~ 101 (462)
+.+.+|+|+|+|.+|..+++.|... |. .++++|.+. .|++ .+.+.. +.+..-+
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~-------------------~~~~----~~~~~g--~~~~~gd 90 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIRE-------------------EAAQ----QHRSEG--RNVISGD 90 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCH-------------------HHHH----HHHHTT--CCEEECC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCH-------------------HHHH----HHHHCC--CCEEEcC
Confidence 4567999999999999999999999 87 688888432 1222 233332 2221111
Q ss_pred cChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcC
Q 012484 102 EYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREAN 142 (462)
Q Consensus 102 ~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ 142 (462)
....+.... ..-+.++|+||.+..+......+-..++..+
T Consensus 91 ~~~~~~l~~-~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 91 ATDPDFWER-ILDTGHVKLVLLAMPHHQGNQTALEQLQRRN 130 (183)
T ss_dssp TTCHHHHHT-BCSCCCCCEEEECCSSHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHh-ccCCCCCCEEEEeCCChHHHHHHHHHHHHHC
Confidence 111111110 0025689999998877665555556677665
No 29
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.43 E-value=0.0058 Score=58.35 Aligned_cols=114 Identities=12% Similarity=0.272 Sum_probs=66.3
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCccccc--CCCcccccccccccccHHHHHHHHHHH-hCCC----
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVG--DLGNNFMLDESCVGESKAKSVCAFLQE-LNDA---- 94 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~--nl~r~f~~~~~dvG~~Ka~~~~~~l~~-lNp~---- 94 (462)
.|++.+|+|||+|.+|...++.|...|. ++|++|++.-..- .+. . +... -+. ++. ....+. +|+.
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga-~VtViap~~~~~l~~~~~-~-l~~~--~~~-~~~--~~~~~~~~~~~~~~~ 81 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSPDLHKSIIPKFG-K-FIQN--KDQ-PDY--REDAKRFINPNWDPT 81 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEEEECTTHHHHHC-G-GGC----------------CEEECTTCCTT
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCC-EEEEEcCCCCcchhHHHH-H-HHhc--ccc-ccc--cchhhcccccccccc
Confidence 3678999999999999999999999996 5999997552110 000 0 0000 000 000 000000 1111
Q ss_pred -CeE-EEEecChhhhhcCCcCCCC------CCcEEEEcCCChHHHHHHHHHHHHc---CceEEEEe
Q 012484 95 -VKA-KFIEEYPEALIEMNPPFFS------QFTLVVATQLGEEKMIKLDRICREA---NVMLIFAR 149 (462)
Q Consensus 95 -v~v-~~~~~~~~~~~~~~~~~~~------~~dvVi~~~~~~~~~~~l~~~~~~~---~ip~i~~~ 149 (462)
-.+ +.+... + .++.+. ++|+||++++..+.-..+...|++. ++|+-.++
T Consensus 82 ~g~i~~~i~~~---~---~~~dL~~l~~~~~adlViaat~d~~~n~~I~~~Ar~~f~~~i~VNvvd 141 (274)
T 1kyq_A 82 KNEIYEYIRSD---F---KDEYLDLENENDAWYIIMTCIPDHPESARIYHLCKERFGKQQLVNVAD 141 (274)
T ss_dssp SCCCSEEECSS---C---CGGGGCCSSTTCCEEEEEECCSCHHHHHHHHHHHHHHHCTTSEEEETT
T ss_pred cCCeeEEEcCC---C---CHHHHhhcccCCCeEEEEEcCCChHHHHHHHHHHHHhcCCCcEEEECC
Confidence 112 222221 1 122344 8999999998877888899999999 88864444
No 30
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.37 E-value=0.011 Score=50.06 Aligned_cols=87 Identities=17% Similarity=0.194 Sum_probs=54.4
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecCh
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYP 104 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~~ 104 (462)
+.+|+|+|+|.+|..+++.|...|. .++++|.+.- ++ +.+.+ ..+.+ +..+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~-------------------~~----~~~~~--~g~~~--i~gd~ 58 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRT-------------------RV----DELRE--RGVRA--VLGNA 58 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHH-------------------HH----HHHHH--TTCEE--EESCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHH-------------------HH----HHHHH--cCCCE--EECCC
Confidence 4689999999999999999999997 6999985431 22 22333 23332 22221
Q ss_pred h--hhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHc
Q 012484 105 E--ALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREA 141 (462)
Q Consensus 105 ~--~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~ 141 (462)
. +... ..-+.++|+||++..+......+...+++.
T Consensus 59 ~~~~~l~--~a~i~~ad~vi~~~~~~~~n~~~~~~a~~~ 95 (140)
T 3fwz_A 59 ANEEIMQ--LAHLECAKWLILTIPNGYEAGEIVASARAK 95 (140)
T ss_dssp TSHHHHH--HTTGGGCSEEEECCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHH--hcCcccCCEEEEECCChHHHHHHHHHHHHH
Confidence 1 1111 112457899998887766555555566665
No 31
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=96.23 E-value=0.0098 Score=59.16 Aligned_cols=93 Identities=15% Similarity=0.142 Sum_probs=60.2
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEec-
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE- 102 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~- 102 (462)
++.||+|+|+|.+|..+++.|... ..+++.|.+ . +.+..+.+.+....++.
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~--~~v~~~~~~-------------------~-------~~~~~~~~~~~~~~~d~~ 66 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVN-------------------N-------ENLEKVKEFATPLKVDAS 66 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESC-------------------H-------HHHHHHTTTSEEEECCTT
T ss_pred CccEEEEECCCHHHHHHHHHHhcC--CCeEEEEcC-------------------H-------HHHHHHhccCCcEEEecC
Confidence 345799999999999999998653 567776622 1 23334444444322221
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEEEEe
Q 012484 103 YPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFAR 149 (462)
Q Consensus 103 ~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~ 149 (462)
+.+.+ .+.++++|+||.+..+. ....+.+.|.+.++.+++..
T Consensus 67 d~~~l----~~~~~~~DvVi~~~p~~-~~~~v~~~~~~~g~~yvD~s 108 (365)
T 3abi_A 67 NFDKL----VEVMKEFELVIGALPGF-LGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp CHHHH----HHHHTTCSEEEECCCGG-GHHHHHHHHHHHTCEEEECC
T ss_pred CHHHH----HHHHhCCCEEEEecCCc-ccchHHHHHHhcCcceEeee
Confidence 11111 23467899999887653 45678899999999988743
No 32
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=96.14 E-value=0.013 Score=59.93 Aligned_cols=100 Identities=17% Similarity=0.284 Sum_probs=63.6
Q ss_pred cCcEEEEcCChhHHHHHHHHHHh-CC--CeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEe
Q 012484 25 KASVCLLNCGPTGSETLKNLVLG-GI--GSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIE 101 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~-Gv--~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~ 101 (462)
..+|+|||+|++|+.++..|++. ++ ..|+++|.+... .++ .+.+ .++.....
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~-~~~-------------------~~~~-----g~~~~~~~ 67 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTK-VDV-------------------AQQY-----GVSFKLQQ 67 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCS-CCH-------------------HHHH-----TCEEEECC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhh-hhH-------------------Hhhc-----CCceeEEe
Confidence 47899999999999999999986 45 589999855431 111 1111 23433333
Q ss_pred cChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEEEEee
Q 012484 102 EYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARS 150 (462)
Q Consensus 102 ~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~ 150 (462)
....++.+.-...+++.|+||.+..+. .-..+-+.|.+.|+-+|+...
T Consensus 68 Vdadnv~~~l~aLl~~~DvVIN~s~~~-~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 68 ITPQNYLEVIGSTLEENDFLIDVSIGI-SSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp CCTTTHHHHTGGGCCTTCEEEECCSSS-CHHHHHHHHHHHTCEEEESSC
T ss_pred ccchhHHHHHHHHhcCCCEEEECCccc-cCHHHHHHHHHcCCCEEECCC
Confidence 222222111123455569999866553 345678899999999888654
No 33
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=96.11 E-value=0.0086 Score=55.45 Aligned_cols=91 Identities=11% Similarity=0.137 Sum_probs=58.0
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecC
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY 103 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~ 103 (462)
.+.+|+|+|+|.+|..+++.|...|. ++++|.+.- ++ +.+. +.+.+ +..+
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~--v~vid~~~~-------------------~~----~~~~---~~~~~--i~gd 57 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV--FVLAEDENV-------------------RK----KVLR---SGANF--VHGD 57 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE--EEEESCGGG-------------------HH----HHHH---TTCEE--EESC
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe--EEEEECCHH-------------------HH----HHHh---cCCeE--EEcC
Confidence 35689999999999999999999987 888874321 11 1222 33433 3332
Q ss_pred hhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCce
Q 012484 104 PEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVM 144 (462)
Q Consensus 104 ~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip 144 (462)
..+.......-+.++|.||++..+......+...+++.+..
T Consensus 58 ~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~ 98 (234)
T 2aef_A 58 PTRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDES 98 (234)
T ss_dssp TTCHHHHHHTTCTTCSEEEECCSCHHHHHHHHHHHHHHCSS
T ss_pred CCCHHHHHhcCcchhcEEEEcCCCcHHHHHHHHHHHHHCCC
Confidence 21110001123668999999888777667777788887653
No 34
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.03 E-value=0.012 Score=56.05 Aligned_cols=74 Identities=22% Similarity=0.266 Sum_probs=52.2
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEec
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 102 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~ 102 (462)
+.+++|+|+|+||+|..++..|...|+.++++++.+. .|++.+++.+.. ..+.....
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~-------------------~~a~~la~~~~~----~~~~~~~~ 174 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM-------------------AKALALRNELDH----SRLRISRY 174 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH-------------------HHHHHHHHHHCC----TTEEEECS
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH-------------------HHHHHHHHHhcc----CCeeEeeH
Confidence 5678999999999999999999999999999986321 366666665543 12333321
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCCC
Q 012484 103 YPEALIEMNPPFFSQFTLVVATQLG 127 (462)
Q Consensus 103 ~~~~~~~~~~~~~~~~dvVi~~~~~ 127 (462)
+++. . .++|+||.|+..
T Consensus 175 --~~l~----~--~~~DivInaTp~ 191 (272)
T 3pwz_A 175 --EALE----G--QSFDIVVNATSA 191 (272)
T ss_dssp --GGGT----T--CCCSEEEECSSG
T ss_pred --HHhc----c--cCCCEEEECCCC
Confidence 1221 1 579999988754
No 35
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=96.02 E-value=0.016 Score=56.77 Aligned_cols=36 Identities=17% Similarity=0.339 Sum_probs=31.4
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
+|+..+|.|+|+|.+|+.++..|+..|.+.++|+|-
T Consensus 4 ~m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di 39 (324)
T 3gvi_A 4 SMARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDI 39 (324)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CCcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeC
Confidence 356789999999999999999999999888999983
No 36
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=95.93 E-value=0.017 Score=55.33 Aligned_cols=74 Identities=22% Similarity=0.296 Sum_probs=53.1
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEec
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 102 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~ 102 (462)
+.+++|+|+|+||+|..++..|...|+.++++++.+. .|++.+++.+.... .+.....
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~-------------------~~a~~la~~~~~~~---~~~~~~~ 181 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTF-------------------AKAEQLAELVAAYG---EVKAQAF 181 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH-------------------HHHHHHHHHHGGGS---CEEEEEG
T ss_pred ccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH-------------------HHHHHHHHHhhccC---CeeEeeH
Confidence 4678999999999999999999999999999987322 36777666665432 2333321
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCCC
Q 012484 103 YPEALIEMNPPFFSQFTLVVATQLG 127 (462)
Q Consensus 103 ~~~~~~~~~~~~~~~~dvVi~~~~~ 127 (462)
+++ -.++|+||.|+..
T Consensus 182 --~~l-------~~~aDiIInaTp~ 197 (281)
T 3o8q_A 182 --EQL-------KQSYDVIINSTSA 197 (281)
T ss_dssp --GGC-------CSCEEEEEECSCC
T ss_pred --HHh-------cCCCCEEEEcCcC
Confidence 111 1589999988754
No 37
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.80 E-value=0.075 Score=48.73 Aligned_cols=38 Identities=13% Similarity=0.097 Sum_probs=28.7
Q ss_pred HHHHHhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 19 GQAALEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 19 ~q~~L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
-+..|++.+|+|.|+ |++|.++++.|...|. ++++++.
T Consensus 15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R 53 (236)
T 3e8x_A 15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVR 53 (236)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cccCcCCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEEC
Confidence 456789999999997 8999999999999996 6888764
No 38
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=95.78 E-value=0.022 Score=56.75 Aligned_cols=94 Identities=14% Similarity=0.082 Sum_probs=57.8
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEec
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 102 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~ 102 (462)
=++++|+|+|+|++|..++++|+.. ..+++.|.+. .|++.++ .......++.
T Consensus 14 ~~~~~v~IiGaG~iG~~ia~~L~~~--~~V~V~~R~~-------------------~~a~~la-------~~~~~~~~d~ 65 (365)
T 2z2v_A 14 GRHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVNN-------------------ENLEKVK-------EFATPLKVDA 65 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESCH-------------------HHHHHHT-------TTSEEEECCT
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHcC--CeEEEEECCH-------------------HHHHHHH-------hhCCeEEEec
Confidence 3578999999999999999999988 6788887432 1333222 1122111111
Q ss_pred -ChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEEEEe
Q 012484 103 -YPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFAR 149 (462)
Q Consensus 103 -~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~ 149 (462)
+...+ .+.++++|+||.|.. ......+...|.+.++.+++..
T Consensus 66 ~~~~~l----~~ll~~~DvVIn~~P-~~~~~~v~~a~l~~G~~~vD~s 108 (365)
T 2z2v_A 66 SNFDKL----VEVMKEFELVIGALP-GFLGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp TCHHHH----HHHHTTCSCEEECCC-HHHHHHHHHHHHHTTCCEEECC
T ss_pred CCHHHH----HHHHhCCCEEEECCC-hhhhHHHHHHHHHhCCeEEEcc
Confidence 11111 234567899998853 3334457778888888877643
No 39
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.73 E-value=0.0082 Score=61.82 Aligned_cols=97 Identities=18% Similarity=0.160 Sum_probs=61.2
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecChh
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYPE 105 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~~~ 105 (462)
-||+|+|+|-+|..+|+.|...|. .++++|.|.- +. +.+.+.. ++ .++..+..
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~-~v~vId~d~~-------------------~~----~~~~~~~-~~--~~i~Gd~~ 56 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENN-DITIVDKDGD-------------------RL----RELQDKY-DL--RVVNGHAS 56 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTE-EEEEEESCHH-------------------HH----HHHHHHS-SC--EEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHH-------------------HH----HHHHHhc-Cc--EEEEEcCC
Confidence 479999999999999999998885 5999995531 11 2232211 23 33443322
Q ss_pred hhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHc-CceEEEEe
Q 012484 106 ALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREA-NVMLIFAR 149 (462)
Q Consensus 106 ~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~-~ip~i~~~ 149 (462)
...-....-+.++|++|+++++.+.-......+++. +.+-+.+.
T Consensus 57 ~~~~L~~Agi~~ad~~ia~t~~De~Nl~~~~~Ak~~~~~~~~iar 101 (461)
T 4g65_A 57 HPDVLHEAGAQDADMLVAVTNTDETNMAACQVAFTLFNTPNRIAR 101 (461)
T ss_dssp CHHHHHHHTTTTCSEEEECCSCHHHHHHHHHHHHHHHCCSSEEEE
T ss_pred CHHHHHhcCCCcCCEEEEEcCChHHHHHHHHHHHHhcCCccceeE
Confidence 110001123568999999888877777777778774 55544443
No 40
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=95.60 E-value=0.026 Score=55.21 Aligned_cols=35 Identities=14% Similarity=0.372 Sum_probs=31.6
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
|+..+|.|+|+|.+|+.++..|+..|.+.++++|-
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di 37 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDI 37 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeC
Confidence 45679999999999999999999999888999984
No 41
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=95.44 E-value=0.032 Score=53.10 Aligned_cols=35 Identities=17% Similarity=0.330 Sum_probs=31.8
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
+..++|+|+|+|++|..+++.|...|+ +++++|.+
T Consensus 127 ~~~~~v~iiGaG~~g~aia~~L~~~g~-~V~v~~r~ 161 (275)
T 2hk9_A 127 VKEKSILVLGAGGASRAVIYALVKEGA-KVFLWNRT 161 (275)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSS
T ss_pred cCCCEEEEECchHHHHHHHHHHHHcCC-EEEEEECC
Confidence 677899999999999999999999999 89998743
No 42
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=95.41 E-value=0.018 Score=55.09 Aligned_cols=113 Identities=11% Similarity=0.018 Sum_probs=65.1
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHh--CCCCeEEE
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQEL--NDAVKAKF 99 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~l--Np~v~v~~ 99 (462)
.+.+++|+|+|+||+|..++..|...|++++++++.+.-....+...+ +..-.+ .+.+. ..++-++.
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~-------~~~~~~----~~~~~~~~aDiVIna 182 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNI-------NKINLS----HAESHLDEFDIIINT 182 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCC-------EEECHH----HHHHTGGGCSEEEEC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhc-------ccccHh----hHHHHhcCCCEEEEC
Confidence 367899999999999999999999999999999987764444443321 110011 12221 23443333
Q ss_pred EecC--hhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEE
Q 012484 100 IEEY--PEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLI 146 (462)
Q Consensus 100 ~~~~--~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i 146 (462)
...- +..-.....+.++.-.+|++...+... ..+.+.+++.|.+.+
T Consensus 183 Tp~Gm~~~~~~~l~~~~l~~~~~V~D~vY~P~~-T~ll~~A~~~G~~~~ 230 (277)
T 3don_A 183 TPAGMNGNTDSVISLNRLASHTLVSDIVYNPYK-TPILIEAEQRGNPIY 230 (277)
T ss_dssp CC-------CCSSCCTTCCSSCEEEESCCSSSS-CHHHHHHHHTTCCEE
T ss_pred ccCCCCCCCcCCCCHHHcCCCCEEEEecCCCCC-CHHHHHHHHCcCEEe
Confidence 2210 100000123446666677776644322 245677888887643
No 43
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=95.41 E-value=0.03 Score=56.51 Aligned_cols=99 Identities=14% Similarity=0.216 Sum_probs=64.0
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCC--CeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhC-CCCeEEEEec
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGI--GSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELN-DAVKAKFIEE 102 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv--~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lN-p~v~v~~~~~ 102 (462)
.+|+|+|+|++|..+++.|+..|- ..+++.|.+. .|++.+++.+.... +.+.....+.
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~-------------------~~~~~la~~l~~~~~~~~~~~~~D~ 62 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTL-------------------SKCQEIAQSIKAKGYGEIDITTVDA 62 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCH-------------------HHHHHHHHHHHHTTCCCCEEEECCT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCH-------------------HHHHHHHHHhhhhcCCceEEEEecC
Confidence 489999999999999999999883 6899887432 36666666665432 2333322221
Q ss_pred C-hhhhhcCCcCCCCC--CcEEEEcCCChHHHHHHHHHHHHcCceEEEE
Q 012484 103 Y-PEALIEMNPPFFSQ--FTLVVATQLGEEKMIKLDRICREANVMLIFA 148 (462)
Q Consensus 103 ~-~~~~~~~~~~~~~~--~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~ 148 (462)
. ...+ .+.+++ .|+||.+..+. ....+.+.|.+.++.+++.
T Consensus 63 ~d~~~l----~~~l~~~~~DvVin~ag~~-~~~~v~~a~l~~g~~vvD~ 106 (405)
T 4ina_A 63 DSIEEL----VALINEVKPQIVLNIALPY-QDLTIMEACLRTGVPYLDT 106 (405)
T ss_dssp TCHHHH----HHHHHHHCCSEEEECSCGG-GHHHHHHHHHHHTCCEEES
T ss_pred CCHHHH----HHHHHhhCCCEEEECCCcc-cChHHHHHHHHhCCCEEEe
Confidence 1 1111 122333 79999876553 3456778899999987763
No 44
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.33 E-value=0.032 Score=53.33 Aligned_cols=34 Identities=15% Similarity=0.344 Sum_probs=29.5
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCC--CeEEEEeC
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGI--GSITVIDG 57 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv--~~itlvD~ 57 (462)
+..+|.|||+|.+|+.+++.|...|. .+++++|.
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr 37 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIANGYDPNRICVTNR 37 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECS
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeC
Confidence 45789999999999999999999996 37888874
No 45
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=95.28 E-value=0.065 Score=51.95 Aligned_cols=71 Identities=17% Similarity=0.200 Sum_probs=48.3
Q ss_pred cEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHH----hCCCCeEEEEec
Q 012484 27 SVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQE----LNDAVKAKFIEE 102 (462)
Q Consensus 27 ~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~----lNp~v~v~~~~~ 102 (462)
+|.|+|+|.+|+.++..|+..|.++++|+|-+ ..|++..+..+.+ ++..++++...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~-------------------~~~~~g~~~dl~~~~~~~~~~~~i~~t~- 60 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIART-------------------PGKPQGEALDLAHAAAELGVDIRISGSN- 60 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-------------------TTHHHHHHHHHHHHHHHHTCCCCEEEES-
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCC-------------------hhhHHHHHHHHHHhhhhcCCCeEEEECC-
Confidence 68999999999999999999999669999843 1233333333333 44455555422
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcC
Q 012484 103 YPEALIEMNPPFFSQFTLVVATQ 125 (462)
Q Consensus 103 ~~~~~~~~~~~~~~~~dvVi~~~ 125 (462)
+.+-++++|+||.+.
T Consensus 61 --------d~~a~~~aD~Vi~~a 75 (308)
T 2d4a_B 61 --------SYEDMRGSDIVLVTA 75 (308)
T ss_dssp --------CGGGGTTCSEEEECC
T ss_pred --------CHHHhCCCCEEEEeC
Confidence 112367899999873
No 46
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.27 E-value=0.072 Score=48.43 Aligned_cols=37 Identities=14% Similarity=0.249 Sum_probs=28.8
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 21 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 21 ~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
-.+...+|.|||+|.+|+.+++.|...|. +++++|.+
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~-~V~~~~~~ 51 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGH-EVTYYGSK 51 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTC-EEEEECTT
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 45778899999999999999999999996 68888743
No 47
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=95.18 E-value=0.065 Score=50.39 Aligned_cols=35 Identities=20% Similarity=0.345 Sum_probs=30.0
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
+...+|.|||+|.+|+.+++.|...|...++++|.
T Consensus 8 ~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~ 42 (266)
T 3d1l_A 8 IEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSR 42 (266)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECS
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeC
Confidence 44568999999999999999999999765788873
No 48
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=95.13 E-value=0.027 Score=55.92 Aligned_cols=121 Identities=17% Similarity=0.254 Sum_probs=68.1
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHh-CCCCeEEEEe
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQEL-NDAVKAKFIE 101 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~l-Np~v~v~~~~ 101 (462)
++..+|.|||+|.+|..++++|...|. .++++|.+.-....+... |-.-+....+.+... .|++-+..+.
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~--------g~~~~~s~~e~~~~a~~~DvVi~~vp 90 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALERE--------GIAGARSIEEFCAKLVKPRVVWLMVP 90 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT--------TCBCCSSHHHHHHHSCSSCEEEECSC
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHC--------CCEEeCCHHHHHhcCCCCCEEEEeCC
Confidence 456789999999999999999999995 689998654322211111 110011112223322 2454443332
Q ss_pred cC-hhhhhcCCcCCCCCCcEEEEcC-CChHHHHHHHHHHHHcCceEEEEeecc
Q 012484 102 EY-PEALIEMNPPFFSQFTLVVATQ-LGEEKMIKLDRICREANVMLIFARSYG 152 (462)
Q Consensus 102 ~~-~~~~~~~~~~~~~~~dvVi~~~-~~~~~~~~l~~~~~~~~ip~i~~~~~G 152 (462)
.. ...+.+.-...++.-++||.+. ........+.+.+...++.++.+.+.|
T Consensus 91 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsG 143 (358)
T 4e21_A 91 AAVVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSG 143 (358)
T ss_dssp GGGHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEEC
T ss_pred HHHHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCC
Confidence 21 1111111123355556777654 444556667778888899988887654
No 49
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.06 E-value=0.028 Score=47.71 Aligned_cols=34 Identities=18% Similarity=0.102 Sum_probs=30.7
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
....+|+|+|+|++|..+++.|...|+. ++++|.
T Consensus 19 ~~~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r 52 (144)
T 3oj0_A 19 NGGNKILLVGNGMLASEIAPYFSYPQYK-VTVAGR 52 (144)
T ss_dssp HCCCEEEEECCSHHHHHHGGGCCTTTCE-EEEEES
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcC
Confidence 3478999999999999999999999988 999874
No 50
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=95.01 E-value=0.067 Score=52.29 Aligned_cols=74 Identities=26% Similarity=0.208 Sum_probs=52.4
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCC---CCeEEE
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGI-GSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELND---AVKAKF 99 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv-~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp---~v~v~~ 99 (462)
...+|.|+|+|.+|+.++..|+..|+ ++++|+|.+ ..|++..+.-|....| .+++.
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~-------------------~~k~~g~a~DL~~~~~~~~~~~i~- 67 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF-------------------KDKTKGDAIDLEDALPFTSPKKIY- 67 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC-------------------HHHHHHHHHHHHTTGGGSCCCEEE-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC-------------------hHHHHHHHhhHhhhhhhcCCcEEE-
Confidence 45789999999999999999999998 589999832 2356665566665544 33322
Q ss_pred EecChhhhhcCCcCCCCCCcEEEEcCC
Q 012484 100 IEEYPEALIEMNPPFFSQFTLVVATQL 126 (462)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~dvVi~~~~ 126 (462)
. .+.+-++++|+||.+..
T Consensus 68 -~--------~~~~a~~~aDiVvi~ag 85 (326)
T 3vku_A 68 -S--------AEYSDAKDADLVVITAG 85 (326)
T ss_dssp -E--------CCGGGGTTCSEEEECCC
T ss_pred -E--------CcHHHhcCCCEEEECCC
Confidence 1 12234778999987653
No 51
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.00 E-value=0.12 Score=48.66 Aligned_cols=99 Identities=16% Similarity=0.149 Sum_probs=60.5
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecC
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY 103 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~ 103 (462)
+..+|+|.|+|.+|+.+++.|...|. +++.++...- . +.+.+++ +..+
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~---~--------------------------~~~~~~~--~~~D 49 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGH-EVTGLRRSAQ---P--------------------------MPAGVQT--LIAD 49 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTC-CEEEEECTTS---C--------------------------CCTTCCE--EECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcc---c--------------------------cccCCce--EEcc
Confidence 45689999999999999999999997 5777764321 1 1123332 2222
Q ss_pred hhhhhcCCcCCCCC-CcEEEEcCC------------ChHHHHHHHHHHHHcCc-eEEEEeeccceE
Q 012484 104 PEALIEMNPPFFSQ-FTLVVATQL------------GEEKMIKLDRICREANV-MLIFARSYGLTG 155 (462)
Q Consensus 104 ~~~~~~~~~~~~~~-~dvVi~~~~------------~~~~~~~l~~~~~~~~i-p~i~~~~~G~~G 155 (462)
..+.. .-...+.+ +|+||.+.. +......+.+.|++.++ .+|.+++.+.+|
T Consensus 50 l~d~~-~~~~~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg 114 (286)
T 3gpi_A 50 VTRPD-TLASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYG 114 (286)
T ss_dssp TTCGG-GCTTGGGGCCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCC
T ss_pred CCChH-HHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEc
Confidence 11110 01123444 788885421 23345566777877774 688888888776
No 52
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.93 E-value=0.056 Score=54.72 Aligned_cols=89 Identities=16% Similarity=0.201 Sum_probs=59.6
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecCh
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYP 104 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~~ 104 (462)
+.+|+|+|+|-+|..+++.|...|+ .++++|.|.- +++ .+.+. .+.+ +..+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~-------------------~v~----~~~~~--g~~v--i~GDa 55 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPD-------------------HIE----TLRKF--GMKV--FYGDA 55 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHH-------------------HHH----HHHHT--TCCC--EESCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHH-------------------HHH----HHHhC--CCeE--EEcCC
Confidence 4689999999999999999999997 5999986542 222 22222 2222 22221
Q ss_pred h--hhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCc
Q 012484 105 E--ALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANV 143 (462)
Q Consensus 105 ~--~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~i 143 (462)
. ++.. ..-+.++++||++.++......+...+++.+.
T Consensus 56 t~~~~L~--~agi~~A~~viv~~~~~~~n~~i~~~ar~~~p 94 (413)
T 3l9w_A 56 TRMDLLE--SAGAAKAEVLINAIDDPQTNLQLTEMVKEHFP 94 (413)
T ss_dssp TCHHHHH--HTTTTTCSEEEECCSSHHHHHHHHHHHHHHCT
T ss_pred CCHHHHH--hcCCCccCEEEECCCChHHHHHHHHHHHHhCC
Confidence 1 1111 11256899999998887877888888888774
No 53
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=94.88 E-value=0.1 Score=50.23 Aligned_cols=71 Identities=17% Similarity=0.170 Sum_probs=48.0
Q ss_pred cEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHH----hCCCCeEEEEe
Q 012484 27 SVCLLNCGPTGSETLKNLVLGGI-GSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQE----LNDAVKAKFIE 101 (462)
Q Consensus 27 ~VlivG~g~lG~eiaknLvl~Gv-~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~----lNp~v~v~~~~ 101 (462)
||.|||+|.+|+.+|-.|+..|. +++.|+| +-..|++..+.-|.. ++...++..-.
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~D-------------------i~~~~~~G~a~DL~h~~~~~~~~~~i~~~~ 62 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVD-------------------IAEDLAVGEAMDLAHAAAGIDKYPKIVGGA 62 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEEC-------------------SSHHHHHHHHHHHHHHHGGGTCCCEEEEES
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEe-------------------CCCCcchhhhhhhhcccccCCCCCeEecCC
Confidence 69999999999999999998886 7899998 222345544455555 33333433211
Q ss_pred cChhhhhcCCcCCCCCCcEEEEcC
Q 012484 102 EYPEALIEMNPPFFSQFTLVVATQ 125 (462)
Q Consensus 102 ~~~~~~~~~~~~~~~~~dvVi~~~ 125 (462)
+.+-+++.|+||.+.
T Consensus 63 ---------d~~~~~~aDvVvitA 77 (294)
T 2x0j_A 63 ---------DYSLLKGSEIIVVTA 77 (294)
T ss_dssp ---------CGGGGTTCSEEEECC
T ss_pred ---------CHHHhCCCCEEEEec
Confidence 223467899998764
No 54
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=94.85 E-value=0.043 Score=53.48 Aligned_cols=37 Identities=27% Similarity=0.350 Sum_probs=31.0
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeC
Q 012484 21 AALEKASVCLLNCGPTGSETLKNLVLGGI-GSITVIDG 57 (462)
Q Consensus 21 ~~L~~~~VlivG~g~lG~eiaknLvl~Gv-~~itlvD~ 57 (462)
.++...+|+|+|+|.+|..++..|+..|. ..+.++|-
T Consensus 2 ~~m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di 39 (317)
T 3d0o_A 2 NKFKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDL 39 (317)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 34566799999999999999999999886 67999983
No 55
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=94.83 E-value=0.063 Score=52.50 Aligned_cols=74 Identities=22% Similarity=0.130 Sum_probs=50.7
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCC--eEEEEe
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGI-GSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAV--KAKFIE 101 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv-~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v--~v~~~~ 101 (462)
..+|.|+|+|.+|+.++..|+..|. +.++++|-+ ..|++..+.-|+...|.. .++...
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~-------------------~~k~~g~a~DL~~~~~~~~~~v~i~~ 65 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN-------------------KEKAMGDVMDLNHGKAFAPQPVKTSY 65 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC-------------------HHHHHHHHHHHHHTGGGSSSCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc-------------------hHHHHHHHHHHHhccccccCCeEEEe
Confidence 4689999999999999999999998 589999832 236666555566554432 122221
Q ss_pred cChhhhhcCCcCCCCCCcEEEEcC
Q 012484 102 EYPEALIEMNPPFFSQFTLVVATQ 125 (462)
Q Consensus 102 ~~~~~~~~~~~~~~~~~dvVi~~~ 125 (462)
. +.+-++++|+||.+.
T Consensus 66 ~--------~~~a~~~aDvVvi~a 81 (326)
T 3pqe_A 66 G--------TYEDCKDADIVCICA 81 (326)
T ss_dssp E--------CGGGGTTCSEEEECC
T ss_pred C--------cHHHhCCCCEEEEec
Confidence 1 223467899998764
No 56
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=94.64 E-value=0.18 Score=48.72 Aligned_cols=34 Identities=21% Similarity=0.275 Sum_probs=29.8
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGI-GSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv-~~itlvD~d 58 (462)
..+|+|+|+|++|+.++..|+..|. +.++++|.+
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4689999999999999999999995 479999843
No 57
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.64 E-value=0.084 Score=51.64 Aligned_cols=35 Identities=17% Similarity=0.267 Sum_probs=30.8
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
...+|.|+|+|.+|+.+|..|+..|...++++|.+
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~ 47 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDLGDVYMFDII 47 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 34689999999999999999999999569999853
No 58
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=94.57 E-value=0.27 Score=47.36 Aligned_cols=117 Identities=21% Similarity=0.247 Sum_probs=68.0
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecC--
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY-- 103 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~-- 103 (462)
++|.+||+|..|..+|+||+..|. .++++|.+.-....+. +.|-..+...++..+ +.++-+..+...
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~-~v~v~dr~~~~~~~l~--------~~Ga~~a~s~~e~~~--~~dvv~~~l~~~~~ 72 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLV--------AAGASAARSARDAVQ--GADVVISMLPASQH 72 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHH--------HTTCEECSSHHHHHT--TCSEEEECCSCHHH
T ss_pred CEEEEeeehHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHH--------HcCCEEcCCHHHHHh--cCCceeecCCchHH
Confidence 479999999999999999999997 5888874432111110 012111111222221 233443333221
Q ss_pred hhhhhcCC---cCCCCCCcEEEE-cCCChHHHHHHHHHHHHcCceEEEEeeccc
Q 012484 104 PEALIEMN---PPFFSQFTLVVA-TQLGEEKMIKLDRICREANVMLIFARSYGL 153 (462)
Q Consensus 104 ~~~~~~~~---~~~~~~~dvVi~-~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~ 153 (462)
.+.+.... ...++.=++||. ++.+......+.+.+.++|+.|+++-+.|-
T Consensus 73 v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaPVsGg 126 (300)
T 3obb_A 73 VEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGG 126 (300)
T ss_dssp HHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESC
T ss_pred HHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEecCCCCC
Confidence 11222111 122334467775 456777788899999999999999887663
No 59
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.55 E-value=0.24 Score=47.75 Aligned_cols=32 Identities=19% Similarity=0.440 Sum_probs=29.0
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeC
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGI-GSITVIDG 57 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv-~~itlvD~ 57 (462)
.+|+|||+|.+|+.++..|+..|. ..++++|.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~ 34 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDA 34 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcC
Confidence 479999999999999999999997 68999984
No 60
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.54 E-value=0.12 Score=49.97 Aligned_cols=34 Identities=15% Similarity=0.225 Sum_probs=30.8
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..+|.|||+|.+|+.++++|+..|...++++|.+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4689999999999999999999998789999975
No 61
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=94.53 E-value=0.08 Score=51.52 Aligned_cols=36 Identities=19% Similarity=0.338 Sum_probs=32.0
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
++..+|.|+|+|.+|+.+|..|+..|.+.++++|.+
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 345789999999999999999999999889999843
No 62
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=94.49 E-value=0.12 Score=50.08 Aligned_cols=34 Identities=9% Similarity=0.119 Sum_probs=30.2
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..+|.|||+|.+|+.++++|+..|...++++|.+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4689999999999999999999996579998854
No 63
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=94.43 E-value=0.22 Score=43.97 Aligned_cols=34 Identities=26% Similarity=0.391 Sum_probs=28.9
Q ss_pred cCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 25 KASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 25 ~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
+.+|+|.|+ |++|.++++.|...| .++++++.+.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r~~ 37 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVRDS 37 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCG
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCh
Confidence 368999997 899999999999999 4788887654
No 64
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=94.43 E-value=0.12 Score=49.82 Aligned_cols=31 Identities=19% Similarity=0.213 Sum_probs=28.2
Q ss_pred cEEEEcCChhHHHHHHHHHHhCCC-eEEEEeC
Q 012484 27 SVCLLNCGPTGSETLKNLVLGGIG-SITVIDG 57 (462)
Q Consensus 27 ~VlivG~g~lG~eiaknLvl~Gv~-~itlvD~ 57 (462)
+|.|+|+|.+|+.++..|+..|.. +++|+|-
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~ 33 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDI 33 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 799999999999999999999974 8999983
No 65
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.41 E-value=0.059 Score=52.14 Aligned_cols=51 Identities=20% Similarity=0.197 Sum_probs=31.8
Q ss_pred hhhHHhhcCHHHHH--HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 8 YDRQLRIWGEQGQA--ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 8 YdRQl~l~G~~~q~--~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
|+-|-+.|-..... .....+|.|||+|.+|+.++++|+..|. .++++|.+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~m~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 54 (310)
T 3doj_A 2 GSSHHHHHHSSGLVPRGSHMMEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTL 54 (310)
T ss_dssp ----------------CCCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSG
T ss_pred CCcccccccccccCcccccCCEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 34344443333333 3444689999999999999999999997 799998654
No 66
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=94.40 E-value=0.13 Score=49.86 Aligned_cols=72 Identities=25% Similarity=0.205 Sum_probs=48.7
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCC----CCeEEE
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGI-GSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELND----AVKAKF 99 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv-~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp----~v~v~~ 99 (462)
..+|.|+|+|.+|+.++..|...|. ++++++|-+ ..|++..+..+.+..+ .+++..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~-------------------~~~~~~~~~dl~~~~~~~~~~~~i~~ 66 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN-------------------ESKAIGDAMDFNHGKVFAPKPVDIWH 66 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS-------------------HHHHHHHHHHHHHHTTSSSSCCEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC-------------------cchHHHHHhhHHHHhhhcCCCeEEEc
Confidence 3689999999999999999999885 679999832 1244443344444444 444432
Q ss_pred EecChhhhhcCCcCCCCCCcEEEEcC
Q 012484 100 IEEYPEALIEMNPPFFSQFTLVVATQ 125 (462)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~dvVi~~~ 125 (462)
. ..+-++++|+||.+.
T Consensus 67 --~--------~~~al~~aDvViia~ 82 (316)
T 1ldn_A 67 --G--------DYDDCRDADLVVICA 82 (316)
T ss_dssp --C--------CGGGTTTCSEEEECC
T ss_pred --C--------cHHHhCCCCEEEEcC
Confidence 1 123477999999874
No 67
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.38 E-value=0.16 Score=49.59 Aligned_cols=32 Identities=22% Similarity=0.374 Sum_probs=29.1
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
.+|+|||+|.+|+.++..|+..|...++++|-
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di 36 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDI 36 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeC
Confidence 58999999999999999999999955999984
No 68
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.36 E-value=0.11 Score=50.39 Aligned_cols=33 Identities=9% Similarity=0.235 Sum_probs=30.1
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.+|.|||+|.+|+.++..|+..|...++++|.+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~ 37 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIA 37 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 589999999999999999999998679999854
No 69
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.35 E-value=0.13 Score=49.87 Aligned_cols=33 Identities=24% Similarity=0.241 Sum_probs=29.4
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCC-eEEEEeCC
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIG-SITVIDGS 58 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~-~itlvD~d 58 (462)
.+|+|||+|.+|..+++.|...|.. .++++|.+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~ 67 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 67 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 6899999999999999999999984 78888743
No 70
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=94.29 E-value=0.27 Score=46.85 Aligned_cols=67 Identities=12% Similarity=0.113 Sum_probs=49.2
Q ss_pred HHHHHHHhcCcEEEEc-CChhHHHHHHHHHHhCCC--eEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCC
Q 012484 17 EQGQAALEKASVCLLN-CGPTGSETLKNLVLGGIG--SITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELND 93 (462)
Q Consensus 17 ~~~q~~L~~~~VlivG-~g~lG~eiaknLvl~Gv~--~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp 93 (462)
......|.+++|+|.| .||+|.++++.|+..|.+ ++.++|.+ ..+.+.+++.+.+.+|
T Consensus 25 ~~~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~-------------------~~~~~~~~~~l~~~~~ 85 (287)
T 3rku_A 25 RKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARR-------------------LEKLEELKKTIDQEFP 85 (287)
T ss_dssp HHHHHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESC-------------------HHHHHHHHHHHHHHCT
T ss_pred ccchhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECC-------------------HHHHHHHHHHHHhhCC
Confidence 3445678999999998 488999999999999985 77777632 1355666677777777
Q ss_pred CCeEEEEec
Q 012484 94 AVKAKFIEE 102 (462)
Q Consensus 94 ~v~v~~~~~ 102 (462)
..++..+..
T Consensus 86 ~~~~~~~~~ 94 (287)
T 3rku_A 86 NAKVHVAQL 94 (287)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 666665543
No 71
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=94.21 E-value=0.27 Score=47.67 Aligned_cols=112 Identities=15% Similarity=0.110 Sum_probs=65.1
Q ss_pred HHHhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhC-----CC
Q 012484 21 AALEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELN-----DA 94 (462)
Q Consensus 21 ~~L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lN-----p~ 94 (462)
..++..+|+|.|+ |.+|+.+++.|...|. +++.++...-. .. .....+..+. +.
T Consensus 21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~------------------~~-~~~~~~~~~~~~~~~~~ 80 (351)
T 3ruf_A 21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTG------------------HQ-YNLDEVKTLVSTEQWSR 80 (351)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSC------------------CH-HHHHHHHHTSCHHHHTT
T ss_pred CCCCCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCC------------------ch-hhhhhhhhccccccCCc
Confidence 3567889999995 8899999999999995 67777643210 00 0112222221 33
Q ss_pred CeEEEEecChhhhhcCCcCCCCCCcEEEEcCCC-----------------hHHHHHHHHHHHHcCc-eEEEEeeccceE
Q 012484 95 VKAKFIEEYPEALIEMNPPFFSQFTLVVATQLG-----------------EEKMIKLDRICREANV-MLIFARSYGLTG 155 (462)
Q Consensus 95 v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~-----------------~~~~~~l~~~~~~~~i-p~i~~~~~G~~G 155 (462)
++ .+..+..+.. .-...+.++|+||.+... ......+.+.|++.++ .+|.+++.+.+|
T Consensus 81 ~~--~~~~Dl~d~~-~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg 156 (351)
T 3ruf_A 81 FC--FIEGDIRDLT-TCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYG 156 (351)
T ss_dssp EE--EEECCTTCHH-HHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGT
T ss_pred eE--EEEccCCCHH-HHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcC
Confidence 33 3433322110 012345689999965432 0112345667888876 688888877765
No 72
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=94.19 E-value=0.3 Score=47.27 Aligned_cols=106 Identities=14% Similarity=0.231 Sum_probs=60.5
Q ss_pred HHHhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEE
Q 012484 21 AALEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKF 99 (462)
Q Consensus 21 ~~L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~ 99 (462)
..+...+|+|.|+ |.+|+.+++.|...|. +++++|...-... .. +..+...-.+..
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~---~~-------------------~~~~~~~~~~~~ 79 (343)
T 2b69_A 23 MEKDRKRILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRK---RN-------------------VEHWIGHENFEL 79 (343)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCG---GG-------------------TGGGTTCTTEEE
T ss_pred cccCCCEEEEEcCccHHHHHHHHHHHHCCC-EEEEEeCCCccch---hh-------------------hhhhccCCceEE
Confidence 4567789999996 8899999999999995 6777764321100 00 001111112333
Q ss_pred EecChhhhhcCCcCCCCCCcEEEEcCCC---------hHH--------HHHHHHHHHHcCceEEEEeeccceE
Q 012484 100 IEEYPEALIEMNPPFFSQFTLVVATQLG---------EEK--------MIKLDRICREANVMLIFARSYGLTG 155 (462)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~dvVi~~~~~---------~~~--------~~~l~~~~~~~~ip~i~~~~~G~~G 155 (462)
+..+. . ...+.++|+||.+... ... ...+.+.|++.++.+|.+++.+.+|
T Consensus 80 ~~~D~---~---~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g 146 (343)
T 2b69_A 80 INHDV---V---EPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYG 146 (343)
T ss_dssp EECCT---T---SCCCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGB
T ss_pred EeCcc---C---ChhhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcHHHhC
Confidence 33221 1 1235678999965321 111 2345567778888888888877766
No 73
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=94.14 E-value=0.16 Score=48.55 Aligned_cols=33 Identities=12% Similarity=0.203 Sum_probs=27.9
Q ss_pred cCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 25 KASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..+|+|.| .|.+|+.+++.|...|. +++.++..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 35 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRS 35 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 36899999 58899999999999996 67777754
No 74
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=94.13 E-value=0.19 Score=49.12 Aligned_cols=32 Identities=9% Similarity=0.426 Sum_probs=29.6
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCC-CeEEEEe
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGI-GSITVID 56 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv-~~itlvD 56 (462)
..+|.|+|+|.+|+.+|..|+..|+ +.++++|
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~D 53 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVD 53 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEE
Confidence 4789999999999999999999998 6899998
No 75
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=94.12 E-value=0.19 Score=45.31 Aligned_cols=96 Identities=16% Similarity=0.105 Sum_probs=57.2
Q ss_pred cEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecChh
Q 012484 27 SVCLLN-CGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYPE 105 (462)
Q Consensus 27 ~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~~~ 105 (462)
+|+|.| .|++|.++++.|...|. ++++++.+.-....+ +.+ +.+..+..
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~---------------------------~~~--~~~~~D~~ 51 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY---------------------------NNV--KAVHFDVD 51 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC---------------------------TTE--EEEECCTT
T ss_pred eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc---------------------------CCc--eEEEeccc
Confidence 699999 68899999999999994 688887543211111 222 23333222
Q ss_pred hhhcCCcCCCCCCcEEEEcCC---------ChHHHHHHHHHHHHcCc-eEEEEeecc
Q 012484 106 ALIEMNPPFFSQFTLVVATQL---------GEEKMIKLDRICREANV-MLIFARSYG 152 (462)
Q Consensus 106 ~~~~~~~~~~~~~dvVi~~~~---------~~~~~~~l~~~~~~~~i-p~i~~~~~G 152 (462)
+..+.-...+.++|+||.+.. +......+.+.|++.++ .+|..++.+
T Consensus 52 d~~~~~~~~~~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~ 108 (219)
T 3dqp_A 52 WTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIF 108 (219)
T ss_dssp SCHHHHHTTTTTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCHHHHHHHHcCCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence 100001234667888886543 23345567778888775 466666543
No 76
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=94.04 E-value=0.42 Score=44.84 Aligned_cols=97 Identities=12% Similarity=0.109 Sum_probs=61.7
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecCh
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYP 104 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~~ 104 (462)
..+|+|.|+|.+|+.+++.|...|. +++.++.+. .+.. .+.. +. ++.+..+.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~----~~~~--~~--~~~~~~D~ 56 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNP-------------------DQME----AIRA--SG--AEPLLWPG 56 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCG-------------------GGHH----HHHH--TT--EEEEESSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcCh-------------------hhhh----hHhh--CC--CeEEEecc
Confidence 4689999999999999999999986 566665321 1111 1222 23 34444333
Q ss_pred hhhhcCCcCCCCCCcEEEEcCCC----hHHHHHHHHHHHH--cC-ceEEEEeeccceE
Q 012484 105 EALIEMNPPFFSQFTLVVATQLG----EEKMIKLDRICRE--AN-VMLIFARSYGLTG 155 (462)
Q Consensus 105 ~~~~~~~~~~~~~~dvVi~~~~~----~~~~~~l~~~~~~--~~-ip~i~~~~~G~~G 155 (462)
.+ .+ +.++|+||.+... ......+.+.|++ .+ ..+|.+++.+.+|
T Consensus 57 ~d-----~~-~~~~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg 108 (286)
T 3ius_A 57 EE-----PS-LDGVTHLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYG 108 (286)
T ss_dssp SC-----CC-CTTCCEEEECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGC
T ss_pred cc-----cc-cCCCCEEEECCCccccccHHHHHHHHHHHhhcCCceEEEEeecceecC
Confidence 22 22 7789999965432 2234556667777 44 4688888888776
No 77
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=93.99 E-value=0.2 Score=48.50 Aligned_cols=32 Identities=25% Similarity=0.406 Sum_probs=28.8
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
.+|.|+|+|.+|..++..|+..|.-.++++|-
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di 34 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDI 34 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeC
Confidence 58999999999999999999999745999984
No 78
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=93.98 E-value=0.074 Score=54.88 Aligned_cols=124 Identities=14% Similarity=0.162 Sum_probs=69.1
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHh-CCCCeEEEEecC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQEL-NDAVKAKFIEEY 103 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~l-Np~v~v~~~~~~ 103 (462)
..+|.|||+|.+|..+|++|+..|. .++++|.+.-....+...-.. ...+ .-+....+.+..+ .+++-+..+...
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~-g~~i--~~~~s~~e~v~~l~~aDvVil~Vp~~ 79 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEAK-GTKV--VGAQSLKEMVSKLKKPRRIILLVKAG 79 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTTT-TSSC--EECSSHHHHHHTBCSSCEEEECSCSS
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcccC-CCce--eccCCHHHHHhhccCCCEEEEecCCh
Confidence 4689999999999999999999997 699998654322211110000 0000 0001112223322 355544433321
Q ss_pred --hhhhhcCCcCCCCCCcEEEEcCC-ChHHHHHHHHHHHHcCceEEEEeecc
Q 012484 104 --PEALIEMNPPFFSQFTLVVATQL-GEEKMIKLDRICREANVMLIFARSYG 152 (462)
Q Consensus 104 --~~~~~~~~~~~~~~~dvVi~~~~-~~~~~~~l~~~~~~~~ip~i~~~~~G 152 (462)
...+.+.-...++.-++||.+.. .......+.+.+.+.++.++.+.+.|
T Consensus 80 ~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsG 131 (484)
T 4gwg_A 80 QAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSG 131 (484)
T ss_dssp HHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccC
Confidence 11222212234566678887654 33445566677788899999887655
No 79
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=93.90 E-value=0.084 Score=51.71 Aligned_cols=77 Identities=16% Similarity=0.166 Sum_probs=52.4
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCC---Ce
Q 012484 21 AALEKASVCLLNCGPTGSETLKNLVLGGI-GSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDA---VK 96 (462)
Q Consensus 21 ~~L~~~~VlivG~g~lG~eiaknLvl~Gv-~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~---v~ 96 (462)
......+|.|+|+|.+|+.++..|+..|. ..++|+|- ...|++..+.-|+...+. ..
T Consensus 15 ~~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di-------------------~~~~~~g~a~DL~~~~~~~~~~~ 75 (331)
T 4aj2_A 15 EQVPQNKITVVGVGAVGMACAISILMKDLADELALVDV-------------------IEDKLKGEMMDLQHGSLFLKTPK 75 (331)
T ss_dssp --CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS-------------------CHHHHHHHHHHHHHTGGGCSCCE
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeC-------------------ChHHHHHHHHhhhhhhhccCCCe
Confidence 45667899999999999999999999997 57999983 234666666666665332 22
Q ss_pred EEEEecChhhhhcCCcCCCCCCcEEEEcC
Q 012484 97 AKFIEEYPEALIEMNPPFFSQFTLVVATQ 125 (462)
Q Consensus 97 v~~~~~~~~~~~~~~~~~~~~~dvVi~~~ 125 (462)
+.. .. +.+-++++|+||.+.
T Consensus 76 i~~-~~--------d~~~~~~aDiVvi~a 95 (331)
T 4aj2_A 76 IVS-SK--------DYSVTANSKLVIITA 95 (331)
T ss_dssp EEE-CS--------SGGGGTTEEEEEECC
T ss_pred EEE-cC--------CHHHhCCCCEEEEcc
Confidence 211 11 223477999998764
No 80
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=93.74 E-value=0.045 Score=56.52 Aligned_cols=127 Identities=11% Similarity=0.126 Sum_probs=64.4
Q ss_pred HHHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHh-CCCCeEE
Q 012484 20 QAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQEL-NDAVKAK 98 (462)
Q Consensus 20 q~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~l-Np~v~v~ 98 (462)
...+.+++|.|||+|.+|+.++.+|+..|. .++++|.+.-....+.... . +-|-.-+....+.+..+ .+++-+.
T Consensus 10 ~~~~~~~~IgvIGlG~MG~~lA~~La~~G~-~V~v~~r~~~~~~~l~~~~--~--~~gi~~~~s~~e~v~~l~~aDvVil 84 (480)
T 2zyd_A 10 HHHMSKQQIGVVGMAVMGRNLALNIESRGY-TVSIFNRSREKTEEVIAEN--P--GKKLVPYYTVKEFVESLETPRRILL 84 (480)
T ss_dssp -----CBSEEEECCSHHHHHHHHHHHTTTC-CEEEECSSHHHHHHHHHHS--T--TSCEEECSSHHHHHHTBCSSCEEEE
T ss_pred ccccCCCeEEEEccHHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHhhC--C--CCCeEEeCCHHHHHhCCCCCCEEEE
Confidence 346888999999999999999999999997 6889886532211111100 0 00000000111223322 2454444
Q ss_pred EEecC--hhhhhcCCcCCCCCCcEEEEcCCC-hHHHHHHHHHHHHcCceEEEEeec
Q 012484 99 FIEEY--PEALIEMNPPFFSQFTLVVATQLG-EEKMIKLDRICREANVMLIFARSY 151 (462)
Q Consensus 99 ~~~~~--~~~~~~~~~~~~~~~dvVi~~~~~-~~~~~~l~~~~~~~~ip~i~~~~~ 151 (462)
.+... ...+.+.-...++.-++||.+... ......+.+.+.+.++.++.+...
T Consensus 85 ~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~pv~ 140 (480)
T 2zyd_A 85 MVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVS 140 (480)
T ss_dssp CSCSSSHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred ECCCHHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCccc
Confidence 33321 122222112344445677765433 333345566676777777766554
No 81
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=93.72 E-value=0.06 Score=52.96 Aligned_cols=40 Identities=20% Similarity=0.261 Sum_probs=29.2
Q ss_pred HHHHHHhcCcEEEEc-CChhHHHHHHHHHHh-CCCeEEEEeCC
Q 012484 18 QGQAALEKASVCLLN-CGPTGSETLKNLVLG-GIGSITVIDGS 58 (462)
Q Consensus 18 ~~q~~L~~~~VlivG-~g~lG~eiaknLvl~-Gv~~itlvD~d 58 (462)
.|+..|+..+|+|.| .|.+|+.+++.|... |. +++.+|..
T Consensus 17 ~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~ 58 (372)
T 3slg_A 17 QGPGSMKAKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQ 58 (372)
T ss_dssp ------CCCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESC
T ss_pred cCCcccCCCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCC
Confidence 456778889999999 588999999999998 64 68888754
No 82
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=93.71 E-value=0.32 Score=43.55 Aligned_cols=94 Identities=14% Similarity=0.114 Sum_probs=56.4
Q ss_pred cEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecChh
Q 012484 27 SVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYPE 105 (462)
Q Consensus 27 ~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~~~ 105 (462)
+|+|.|+ |++|..+++.|...|. ++++++.+. ..+.++.+.+++ +..+..
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~--------------------------~~~~~~~~~~~~--~~~D~~ 52 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNA--------------------------GKITQTHKDINI--LQKDIF 52 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCS--------------------------HHHHHHCSSSEE--EECCGG
T ss_pred eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCc--------------------------hhhhhccCCCeE--Eecccc
Confidence 6999995 8899999999999994 677776431 112222255543 333222
Q ss_pred hhhcCCcCCCCCCcEEEEcCCC--------hHHHHHHHHHHHHcC-ceEEEEeecc
Q 012484 106 ALIEMNPPFFSQFTLVVATQLG--------EEKMIKLDRICREAN-VMLIFARSYG 152 (462)
Q Consensus 106 ~~~~~~~~~~~~~dvVi~~~~~--------~~~~~~l~~~~~~~~-ip~i~~~~~G 152 (462)
+. ..+.+.++|+||.+... ......+-+.|++.+ ..+|..++.+
T Consensus 53 d~---~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~ 105 (221)
T 3ew7_A 53 DL---TLSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAA 105 (221)
T ss_dssp GC---CHHHHTTCSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC
T ss_pred Ch---hhhhhcCCCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEecce
Confidence 11 11456788999966432 123345666777764 4566665543
No 83
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.67 E-value=0.2 Score=48.38 Aligned_cols=32 Identities=28% Similarity=0.418 Sum_probs=28.6
Q ss_pred cEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCC
Q 012484 27 SVCLLNCGPTGSETLKNLVLGGI-GSITVIDGS 58 (462)
Q Consensus 27 ~VlivG~g~lG~eiaknLvl~Gv-~~itlvD~d 58 (462)
+|+|+|+|.+|+.++..|+..|. +.++++|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 79999999999999999999985 579999843
No 84
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=93.66 E-value=0.056 Score=50.64 Aligned_cols=34 Identities=15% Similarity=0.209 Sum_probs=30.1
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCC---CeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGI---GSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv---~~itlvD~d 58 (462)
..+|.|||+|.+|+.++++|...|. ..++++|.+
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~ 40 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPS 40 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCC
Confidence 3589999999999999999999995 689999854
No 85
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=93.59 E-value=0.35 Score=46.41 Aligned_cols=116 Identities=13% Similarity=0.151 Sum_probs=63.3
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHh--CCCCeEEEEec
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQEL--NDAVKAKFIEE 102 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~l--Np~v~v~~~~~ 102 (462)
+.||.+||+|-.|..+|+||+..|. +++++|.+.-....+... |-..++ .+.++ ..++-+..+..
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~--------G~~~~~----s~~e~~~~~dvvi~~l~~ 71 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGY-ELVVWNRTASKAEPLTKL--------GATVVE----NAIDAITPGGIVFSVLAD 71 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTC-EEEEC-------CTTTTT--------TCEECS----SGGGGCCTTCEEEECCSS
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHc--------CCeEeC----CHHHHHhcCCceeeeccc
Confidence 4689999999999999999999997 588888544333322211 111111 11122 12232222221
Q ss_pred Ch--hhhhcC-CcCCCCCCcEEEE-cCCChHHHHHHHHHHHHcCceEEEEeeccc
Q 012484 103 YP--EALIEM-NPPFFSQFTLVVA-TQLGEEKMIKLDRICREANVMLIFARSYGL 153 (462)
Q Consensus 103 ~~--~~~~~~-~~~~~~~~dvVi~-~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~ 153 (462)
.. ...... -...+..-++||. ++.++.....+.+.+.++|+.++++...|.
T Consensus 72 ~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsGg 126 (297)
T 4gbj_A 72 DAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFAR 126 (297)
T ss_dssp HHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECC
T ss_pred hhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcCCC
Confidence 10 011000 0012234456664 456667788889999999999999887663
No 86
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=93.57 E-value=0.059 Score=53.67 Aligned_cols=37 Identities=22% Similarity=0.364 Sum_probs=35.1
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.|+..+|+|+|+|..|..+++.|+.+|+++|+++|..
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 5788999999999999999999999999999999976
No 87
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=93.48 E-value=0.24 Score=44.67 Aligned_cols=95 Identities=17% Similarity=0.185 Sum_probs=55.9
Q ss_pred cEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecChh
Q 012484 27 SVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYPE 105 (462)
Q Consensus 27 ~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~~~ 105 (462)
+|+|.|+ |++|.++++.|...|. ++++++.+.- +.. .+ ..+.+++ +..+..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~-------------------~~~----~~--~~~~~~~--~~~D~~ 53 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQ-------------------KAA----DR--LGATVAT--LVKEPL 53 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHH-------------------HHH----HH--TCTTSEE--EECCGG
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEeccc-------------------ccc----cc--cCCCceE--Eecccc
Confidence 5999997 8899999999999995 6777653210 111 11 1234443 333322
Q ss_pred hhhcCCcCCCCCCcEEEEcCCC----------hHHHHHHHHHHHHcCceEEEEeecc
Q 012484 106 ALIEMNPPFFSQFTLVVATQLG----------EEKMIKLDRICREANVMLIFARSYG 152 (462)
Q Consensus 106 ~~~~~~~~~~~~~dvVi~~~~~----------~~~~~~l~~~~~~~~ip~i~~~~~G 152 (462)
+. ....+.++|+||.+... ......+-+.|++.+..+|..++.|
T Consensus 54 d~---~~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~ 107 (224)
T 3h2s_A 54 VL---TEADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGSA 107 (224)
T ss_dssp GC---CHHHHTTCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECCGG
T ss_pred cc---cHhhcccCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEecce
Confidence 21 11446688999865432 2223445556666666677766544
No 88
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=93.45 E-value=0.33 Score=47.06 Aligned_cols=31 Identities=13% Similarity=0.313 Sum_probs=28.3
Q ss_pred cEEEEcCChhHHHHHHHHHHhCC-CeEEEEeC
Q 012484 27 SVCLLNCGPTGSETLKNLVLGGI-GSITVIDG 57 (462)
Q Consensus 27 ~VlivG~g~lG~eiaknLvl~Gv-~~itlvD~ 57 (462)
+|.|+|+|.+|+.++..|+..|+ ..++++|-
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~ 33 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDI 33 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 79999999999999999999997 58999983
No 89
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=93.42 E-value=0.06 Score=51.89 Aligned_cols=36 Identities=11% Similarity=0.199 Sum_probs=32.8
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
+..++|+|+|+|++|..++..|...|+.+++++|.+
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 567899999999999999999999999999998743
No 90
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=93.40 E-value=0.15 Score=49.59 Aligned_cols=31 Identities=26% Similarity=0.443 Sum_probs=27.9
Q ss_pred cEEEEcCChhHHHHHHHHHHhCC-CeEEEEeC
Q 012484 27 SVCLLNCGPTGSETLKNLVLGGI-GSITVIDG 57 (462)
Q Consensus 27 ~VlivG~g~lG~eiaknLvl~Gv-~~itlvD~ 57 (462)
+|+|||+|.+|+.++..|+..|. +.++++|.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~ 33 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDV 33 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 79999999999999999999995 47999884
No 91
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=93.33 E-value=0.28 Score=47.63 Aligned_cols=72 Identities=21% Similarity=0.159 Sum_probs=49.7
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhC---CCCeEEEEe
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGI-GSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELN---DAVKAKFIE 101 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv-~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lN---p~v~v~~~~ 101 (462)
.+|.|+|+|.+|..++..|+..|. .++.|+|- ...|++..+..|.+.. +.++++.
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di-------------------~~~~~~g~~~dl~~~~~~~~~~~v~~-- 64 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDV-------------------VKDRTKGDALDLEDAQAFTAPKKIYS-- 64 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS-------------------SHHHHHHHHHHHHGGGGGSCCCEEEE--
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC-------------------CchHHHHHHHHHHHHHHhcCCeEEEE--
Confidence 689999999999999999999885 56999883 2235555455555543 3344432
Q ss_pred cChhhhhcCCcCCCCCCcEEEEcCC
Q 012484 102 EYPEALIEMNPPFFSQFTLVVATQL 126 (462)
Q Consensus 102 ~~~~~~~~~~~~~~~~~dvVi~~~~ 126 (462)
. ..+-++++|+||.+..
T Consensus 65 ~--------~~~a~~~aDvVii~ag 81 (318)
T 1ez4_A 65 G--------EYSDCKDADLVVITAG 81 (318)
T ss_dssp C--------CGGGGTTCSEEEECCC
T ss_pred C--------CHHHhCCCCEEEECCC
Confidence 1 2234779999998764
No 92
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=93.33 E-value=0.072 Score=50.98 Aligned_cols=35 Identities=17% Similarity=0.180 Sum_probs=32.4
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
+.+++|+|+|+||.|..++..|...|+++++|++.
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nR 154 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTR 154 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEES
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeC
Confidence 56789999999999999999999999999999863
No 93
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=93.29 E-value=0.12 Score=49.29 Aligned_cols=34 Identities=18% Similarity=0.298 Sum_probs=30.4
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 23 LEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 23 L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
++.++|+|+| +||+|..+++.|+..|.. ++++|.
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~-V~i~~R 151 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAE-VVLCGR 151 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEEC
Confidence 5678999999 899999999999999986 888863
No 94
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=93.26 E-value=0.14 Score=49.89 Aligned_cols=89 Identities=11% Similarity=0.135 Sum_probs=57.4
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecCh
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYP 104 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~~ 104 (462)
+.+|+|+|+|.+|..+++.|...|. ++++|.|.- +++ +++ +.+.+ +..++
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~--v~vid~~~~-------------------~~~-----~~~--~~~~~--i~gd~ 164 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV--FVLAEDENV-------------------RKK-----VLR--SGANF--VHGDP 164 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE--EEEESCGGG-------------------HHH-----HHH--TTCEE--EESCT
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc--EEEEeCChh-------------------hhh-----HHh--CCcEE--EEeCC
Confidence 5689999999999999999999998 888885431 222 222 23332 33332
Q ss_pred hhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCc
Q 012484 105 EALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANV 143 (462)
Q Consensus 105 ~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~i 143 (462)
.+.......-+.++|.|+++..+.+.-..+...+++.+.
T Consensus 165 ~~~~~L~~a~i~~a~~vi~~~~~d~~n~~~~~~ar~~~~ 203 (336)
T 1lnq_A 165 TRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDE 203 (336)
T ss_dssp TSHHHHHHTCSTTEEEEEECCSSHHHHHHHHHHHHTTCT
T ss_pred CCHHHHHhcChhhccEEEEcCCccHHHHHHHHHHHHHCC
Confidence 211000112356899999888776666677778888765
No 95
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=93.21 E-value=0.2 Score=48.64 Aligned_cols=39 Identities=15% Similarity=0.192 Sum_probs=27.0
Q ss_pred HHHHHhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 19 GQAALEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 19 ~q~~L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.+..+..++|+|.|+ |.+|+.+++.|...|. +++++|..
T Consensus 13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~ 52 (347)
T 4id9_A 13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFDLR 52 (347)
T ss_dssp --------CEEEETTTSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred cccccCCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCC
Confidence 456788899999996 8899999999999995 57777654
No 96
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=93.16 E-value=0.19 Score=49.47 Aligned_cols=35 Identities=14% Similarity=0.300 Sum_probs=31.0
Q ss_pred HhcCcEEEEcC-ChhHHHHHHHHHHhCC-CeEEEEeC
Q 012484 23 LEKASVCLLNC-GPTGSETLKNLVLGGI-GSITVIDG 57 (462)
Q Consensus 23 L~~~~VlivG~-g~lG~eiaknLvl~Gv-~~itlvD~ 57 (462)
|...+|.|+|+ |.+|+.+|..|+..|. ..++++|-
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi 42 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDP 42 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECS
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeC
Confidence 45689999997 9999999999999997 58999983
No 97
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=93.15 E-value=0.15 Score=52.49 Aligned_cols=37 Identities=19% Similarity=0.125 Sum_probs=29.8
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.+..++|+|+|+|++|..++..|+..|-.+++++|.+
T Consensus 20 ~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~ 56 (467)
T 2axq_A 20 RHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRT 56 (467)
T ss_dssp ---CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESS
T ss_pred CCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECC
Confidence 4667899999999999999999999844479999865
No 98
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=93.15 E-value=0.34 Score=46.13 Aligned_cols=37 Identities=24% Similarity=0.332 Sum_probs=29.3
Q ss_pred HHhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 22 ALEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 22 ~L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
.++..+|+|.|+ |.+|+.+++.|...|. +++.++...
T Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~ 41 (321)
T 3vps_A 4 NTLKHRILITGGAGFIGGHLARALVASGE-EVTVLDDLR 41 (321)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC-CEEEECCCS
T ss_pred ccCCCeEEEECCCChHHHHHHHHHHHCCC-EEEEEecCC
Confidence 356789999997 8899999999999996 688877544
No 99
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=93.13 E-value=0.24 Score=46.76 Aligned_cols=30 Identities=13% Similarity=0.188 Sum_probs=27.1
Q ss_pred cEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 27 SVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 27 ~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
+|.|||+|.+|+.+++.|...|. +++++|.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~ 31 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSR 31 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 69999999999999999999997 6888763
No 100
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=93.12 E-value=1 Score=43.07 Aligned_cols=33 Identities=18% Similarity=0.188 Sum_probs=27.8
Q ss_pred HhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEe
Q 012484 23 LEKASVCLLNC-GPTGSETLKNLVLGGIGSITVID 56 (462)
Q Consensus 23 L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD 56 (462)
+++.+|+|.|+ |.+|+.+++.|...|. ++++++
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~ 42 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTA 42 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEe
Confidence 45678999996 8899999999999995 577665
No 101
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.11 E-value=0.79 Score=41.24 Aligned_cols=34 Identities=21% Similarity=0.265 Sum_probs=28.7
Q ss_pred CcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCcc
Q 012484 26 ASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKV 60 (462)
Q Consensus 26 ~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d~v 60 (462)
.+|+|.|+ |.+|..+++.|...| .++++++...-
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~ 39 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRG-FEVTAVVRHPE 39 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTT-CEEEEECSCGG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEcCcc
Confidence 58999995 889999999999999 47888876543
No 102
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=93.02 E-value=0.58 Score=44.40 Aligned_cols=30 Identities=27% Similarity=0.401 Sum_probs=26.0
Q ss_pred cEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 27 SVCLLNC-GPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 27 ~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
+|+|.|+ |.+|+.+++.|...|. +++++|.
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r 32 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVELGY-EVVVVDN 32 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred EEEEECCCChHHHHHHHHHHhCCC-EEEEEeC
Confidence 6999997 8899999999999996 6777764
No 103
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=92.97 E-value=0.083 Score=52.69 Aligned_cols=38 Identities=24% Similarity=0.415 Sum_probs=35.8
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
.+...+|+|+|+|..|..+++.|+.+|+++|+++|..-
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 67889999999999999999999999999999999874
No 104
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=92.95 E-value=0.29 Score=46.92 Aligned_cols=33 Identities=18% Similarity=0.203 Sum_probs=28.9
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..+|.|||+|.+|+.++++|+..|. .++++|.+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGL-STWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-eEEEEECC
Confidence 4689999999999999999999997 68888743
No 105
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=92.91 E-value=0.13 Score=49.50 Aligned_cols=32 Identities=19% Similarity=0.381 Sum_probs=28.9
Q ss_pred CcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 26 ASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 26 ~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.+|+||| +|.+|+.+++.|...|. .++++|.+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~-~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGY-PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 5899999 99999999999999997 68888854
No 106
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=92.91 E-value=0.33 Score=45.77 Aligned_cols=32 Identities=25% Similarity=0.239 Sum_probs=27.8
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCC-eEEEEeC
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIG-SITVIDG 57 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~-~itlvD~ 57 (462)
.+|.|||+|.+|+.+++.|...|.. +++++|.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~ 34 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDI 34 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 4799999999999999999999963 6888774
No 107
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=92.91 E-value=0.089 Score=47.61 Aligned_cols=33 Identities=18% Similarity=0.394 Sum_probs=29.7
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
...|+|||+|..|..+|..|++.|+ +++|+|..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~-~V~v~Ek~ 34 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGH-QVHLFDKS 34 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECC
Confidence 3579999999999999999999999 59999953
No 108
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=92.87 E-value=0.088 Score=49.52 Aligned_cols=36 Identities=17% Similarity=0.337 Sum_probs=32.4
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
+++ +|+|+|+|+.|..++..|...|+++++++|.+.
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 456 999999999999999999999999999998543
No 109
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=92.82 E-value=0.39 Score=46.89 Aligned_cols=35 Identities=20% Similarity=0.249 Sum_probs=28.6
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHH--hCCCeEEEEeCC
Q 012484 23 LEKASVCLLN-CGPTGSETLKNLVL--GGIGSITVIDGS 58 (462)
Q Consensus 23 L~~~~VlivG-~g~lG~eiaknLvl--~Gv~~itlvD~d 58 (462)
+...+|+|.| .|.+|+.+++.|.. .|. +++++|..
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~-~V~~~~r~ 45 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKA-KVVVLDKF 45 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTS-EEEEEECC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCC-eEEEEECC
Confidence 5678999997 58899999999999 776 57777743
No 110
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=92.75 E-value=0.39 Score=49.68 Aligned_cols=125 Identities=13% Similarity=0.128 Sum_probs=66.5
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHh-CCCCeEEEEec
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQEL-NDAVKAKFIEE 102 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~l-Np~v~v~~~~~ 102 (462)
.+.+|.|||+|.+|+.++.+|+..|. .++++|.+.-....+..... . ..|-.-+....+.+..+ .+++-+..+..
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~-~V~v~dr~~~~~~~l~~~~~--~-~~gi~~~~s~~e~v~~l~~aDvVil~Vp~ 84 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGF-TVCAYNRTQSKVDHFLANEA--K-GKSIIGATSIEDFISKLKRPRKVMLLVKA 84 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSHHHHHHHHTTT--T-TSSEECCSSHHHHHHTSCSSCEEEECCCS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHcccc--c-CCCeEEeCCHHHHHhcCCCCCEEEEEcCC
Confidence 35789999999999999999999997 68999865422221111000 0 00000011112233322 25555444433
Q ss_pred C--hhhhhcCCcCCCCCCcEEEEcC-CChHHHHHHHHHHHHcCceEEEEeecc
Q 012484 103 Y--PEALIEMNPPFFSQFTLVVATQ-LGEEKMIKLDRICREANVMLIFARSYG 152 (462)
Q Consensus 103 ~--~~~~~~~~~~~~~~~dvVi~~~-~~~~~~~~l~~~~~~~~ip~i~~~~~G 152 (462)
. ...+.+.-...+..=++||.+. ........+.+.+...++.++.+...|
T Consensus 85 ~~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~pVsg 137 (497)
T 2p4q_A 85 GAPVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVSG 137 (497)
T ss_dssp SHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred hHHHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCCccc
Confidence 1 1222221123455556777654 333344456666777788887766544
No 111
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=92.75 E-value=0.3 Score=46.31 Aligned_cols=35 Identities=11% Similarity=0.112 Sum_probs=28.7
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeC
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGI-GSITVIDG 57 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv-~~itlvD~ 57 (462)
|...+|.|||+|.+|+.+++.|...|. ..++++|.
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~ 39 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNR 39 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcC
Confidence 334689999999999999999999974 36777763
No 112
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=92.68 E-value=0.047 Score=52.51 Aligned_cols=52 Identities=12% Similarity=0.166 Sum_probs=40.2
Q ss_pred hhhhHHhh--cCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 7 KYDRQLRI--WGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 7 rYdRQl~l--~G~~~q~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
.|+|+.+- |.......|.+++|.|||+|.+|..+|+.|...|. +++.+|...
T Consensus 102 ~~~~~~~~g~w~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~ 155 (290)
T 3gvx_A 102 ENNELMKAGIFRQSPTTLLYGKALGILGYGGIGRRVAHLAKAFGM-RVIAYTRSS 155 (290)
T ss_dssp HHHHHHHTTCCCCCCCCCCTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSC
T ss_pred hhhhHhhhcccccCCceeeecchheeeccCchhHHHHHHHHhhCc-EEEEEeccc
Confidence 35555543 54333356889999999999999999999999998 688888654
No 113
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.60 E-value=0.24 Score=47.73 Aligned_cols=31 Identities=16% Similarity=0.136 Sum_probs=26.8
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
..+|+|+|+|++|+.++..|. .| ..+++++.
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g-~~V~~~~r 32 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LY-HDVTVVTR 32 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TT-SEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHh-cC-CceEEEEC
Confidence 358999999999999999999 88 47888763
No 114
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=92.59 E-value=0.13 Score=48.92 Aligned_cols=33 Identities=33% Similarity=0.428 Sum_probs=29.4
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
.+|.|||+|.+|+.++++|...|. .++++|.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCH
Confidence 579999999999999999999995 788988654
No 115
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=92.50 E-value=0.85 Score=45.49 Aligned_cols=38 Identities=18% Similarity=0.313 Sum_probs=32.7
Q ss_pred HHHHhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 20 QAALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 20 q~~L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
...++.++|+|.| .|++|+++++.|+..|...++++|.
T Consensus 30 ~~~~~~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r 68 (399)
T 3nzo_A 30 QSVVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDI 68 (399)
T ss_dssp HHHHHTCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECS
T ss_pred HHHhCCCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEEC
Confidence 3457789999999 5789999999999999888999873
No 116
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.49 E-value=0.22 Score=47.40 Aligned_cols=33 Identities=27% Similarity=0.384 Sum_probs=29.2
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
.+|.|||+|.+|+.++++|...|. .++++|.+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTC-CEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCH
Confidence 479999999999999999999995 689988654
No 117
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=92.48 E-value=0.52 Score=45.47 Aligned_cols=32 Identities=16% Similarity=0.302 Sum_probs=27.9
Q ss_pred cEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCC
Q 012484 27 SVCLLNCGPTGSETLKNLVLGGI-GSITVIDGS 58 (462)
Q Consensus 27 ~VlivG~g~lG~eiaknLvl~Gv-~~itlvD~d 58 (462)
+|+|+|+|.+|+.++..|+..|. .+++++|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~ 34 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVV 34 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 79999999999999999999764 569999854
No 118
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=92.47 E-value=0.13 Score=47.00 Aligned_cols=31 Identities=13% Similarity=0.268 Sum_probs=26.6
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEE-Ee
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITV-ID 56 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itl-vD 56 (462)
..+|.|||+|.+|..+++.|...|. .+++ +|
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~-~V~~v~~ 54 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQI-PAIIANS 54 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTC-CEEEECT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 3689999999999999999999997 4555 55
No 119
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.43 E-value=0.17 Score=49.35 Aligned_cols=33 Identities=15% Similarity=0.152 Sum_probs=28.4
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
...+|.|||+|.+|+.++.+|+.+|. .++++|.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~-~V~~~~r 45 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGE-EVILWAR 45 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCC-eEEEEeC
Confidence 35789999999999999999999995 6888763
No 120
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=92.40 E-value=0.34 Score=47.27 Aligned_cols=73 Identities=26% Similarity=0.167 Sum_probs=49.2
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhC---CCCeEEEE
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGI-GSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELN---DAVKAKFI 100 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv-~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lN---p~v~v~~~ 100 (462)
..+|.|+|+|.+|..++..|+..|. ..+.|+|- ...|++..+..|.+.. +.++++.
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di-------------------~~~~~~g~~~dl~~~~~~~~~~~i~~- 68 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI-------------------FKDKTKGDAIDLSNALPFTSPKKIYS- 68 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS-------------------CHHHHHHHHHHHHTTGGGSCCCEEEE-
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC-------------------CchHhHHHHHHHHHHHHhcCCeEEEE-
Confidence 4689999999999999999998885 56888883 1235555444454433 3444432
Q ss_pred ecChhhhhcCCcCCCCCCcEEEEcCC
Q 012484 101 EEYPEALIEMNPPFFSQFTLVVATQL 126 (462)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~dvVi~~~~ 126 (462)
. ..+-++++|+||.+..
T Consensus 69 -~--------~~~a~~~aDvVii~ag 85 (326)
T 2zqz_A 69 -A--------EYSDAKDADLVVITAG 85 (326)
T ss_dssp -C--------CGGGGGGCSEEEECCC
T ss_pred -C--------CHHHhCCCCEEEEcCC
Confidence 1 2234778999997753
No 121
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=92.37 E-value=1.1 Score=40.75 Aligned_cols=37 Identities=30% Similarity=0.467 Sum_probs=31.2
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHhCCC-eEEEEeCC
Q 012484 22 ALEKASVCLLN-CGPTGSETLKNLVLGGIG-SITVIDGS 58 (462)
Q Consensus 22 ~L~~~~VlivG-~g~lG~eiaknLvl~Gv~-~itlvD~d 58 (462)
.|...+|+|.| .|++|.++++.|+..|.. ++++++.+
T Consensus 15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~ 53 (242)
T 2bka_A 15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRR 53 (242)
T ss_dssp HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESS
T ss_pred hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcC
Confidence 36678999999 589999999999999974 78888754
No 122
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=92.30 E-value=0.13 Score=48.97 Aligned_cols=33 Identities=12% Similarity=0.233 Sum_probs=30.8
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEe
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVID 56 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD 56 (462)
.+++|+|+|+||.|..++..|...|+.+++|++
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~n 150 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYA 150 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEEC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 357899999999999999999999999999986
No 123
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.20 E-value=0.56 Score=45.77 Aligned_cols=33 Identities=15% Similarity=0.197 Sum_probs=29.7
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.+|.|+|+|.+|+.+|..|+..|...++|+|.+
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVV 42 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 589999999999999999999998559999844
No 124
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.15 E-value=0.076 Score=50.99 Aligned_cols=34 Identities=15% Similarity=0.093 Sum_probs=29.8
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
..+|.|||+|.+|..++++|...|. .++++|.+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTT-CEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 4689999999999999999999996 688888543
No 125
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=91.99 E-value=0.21 Score=48.58 Aligned_cols=34 Identities=18% Similarity=0.332 Sum_probs=29.9
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGI-GSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv-~~itlvD~d 58 (462)
..+|+|+|+|.+|..++-.|+..|. ++++++|-+
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 3689999999999999999999886 679999843
No 126
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=91.98 E-value=0.12 Score=52.45 Aligned_cols=35 Identities=23% Similarity=0.525 Sum_probs=32.9
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCC--CeEEEEe
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGI--GSITVID 56 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv--~~itlvD 56 (462)
.|+..+|+|+|+|+.|..+++.|...|+ ++|+++|
T Consensus 183 ~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 183 KISEITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 3567899999999999999999999999 8999998
No 127
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=91.93 E-value=0.22 Score=49.11 Aligned_cols=76 Identities=12% Similarity=0.108 Sum_probs=51.2
Q ss_pred hcCcEEEEcCChhHHHHHHHHHH-hCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEec
Q 012484 24 EKASVCLLNCGPTGSETLKNLVL-GGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 102 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl-~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~ 102 (462)
...+|+|||+|+.|..++..|.. .++.+++++|.+ ..|++.+++.+.+. +.+.+....
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~-------------------~~~a~~la~~~~~~-~g~~~~~~~- 186 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTD-------------------PLATAKLIANLKEY-SGLTIRRAS- 186 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSS-------------------HHHHHHHHHHHTTC-TTCEEEECS-
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCC-------------------HHHHHHHHHHHHhc-cCceEEEeC-
Confidence 46789999999999999999864 578999998732 23666666655432 344443322
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCCC
Q 012484 103 YPEALIEMNPPFFSQFTLVVATQLG 127 (462)
Q Consensus 103 ~~~~~~~~~~~~~~~~dvVi~~~~~ 127 (462)
+.. +.+.++|+||+|+.+
T Consensus 187 ~~~-------eav~~aDiVi~aTps 204 (350)
T 1x7d_A 187 SVA-------EAVKGVDIITTVTAD 204 (350)
T ss_dssp SHH-------HHHTTCSEEEECCCC
T ss_pred CHH-------HHHhcCCEEEEeccC
Confidence 222 234578999988765
No 128
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=91.92 E-value=0.29 Score=45.76 Aligned_cols=31 Identities=16% Similarity=0.338 Sum_probs=24.3
Q ss_pred cEEEEcC-ChhHHHHHHHHHHh-CCCeEEEEeC
Q 012484 27 SVCLLNC-GPTGSETLKNLVLG-GIGSITVIDG 57 (462)
Q Consensus 27 ~VlivG~-g~lG~eiaknLvl~-Gv~~itlvD~ 57 (462)
+|+|+|+ |.+|..+++.+... |..=+-++|.
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~ 34 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDA 34 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEcc
Confidence 7999997 99999999998765 7654456663
No 129
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=91.84 E-value=0.081 Score=51.40 Aligned_cols=36 Identities=14% Similarity=0.102 Sum_probs=27.2
Q ss_pred HhcCcEEEEcC-ChhHHHHHHHHHHhCCC-eEEEEeCC
Q 012484 23 LEKASVCLLNC-GPTGSETLKNLVLGGIG-SITVIDGS 58 (462)
Q Consensus 23 L~~~~VlivG~-g~lG~eiaknLvl~Gv~-~itlvD~d 58 (462)
+...+|+|.|+ |.+|+.+++.|...|.. .++.+|..
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~ 59 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDAL 59 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECC
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecc
Confidence 45678999997 88999999999999943 45555543
No 130
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=91.81 E-value=0.35 Score=44.58 Aligned_cols=32 Identities=22% Similarity=0.235 Sum_probs=27.5
Q ss_pred cEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 27 SVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 27 ~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
+|.|||+|.+|..++++|...|+.-..++|.+
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~ 33 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDVR 33 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEecC
Confidence 69999999999999999998887545788755
No 131
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=91.78 E-value=0.065 Score=52.18 Aligned_cols=52 Identities=19% Similarity=0.333 Sum_probs=40.1
Q ss_pred hhhhHHh--hcCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 7 KYDRQLR--IWGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 7 rYdRQl~--l~G~~~q~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
.|+|+.+ -|.......|.+++|.|||+|.+|..+|+.|...|. +++.+|...
T Consensus 119 ~~~~~~~~g~W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~~G~-~V~~~dr~~ 172 (315)
T 3pp8_A 119 DYQALKNQALWKPLPEYTREEFSVGIMGAGVLGAKVAESLQAWGF-PLRCWSRSR 172 (315)
T ss_dssp HHHHHHHTTCCCCCCCCCSTTCCEEEECCSHHHHHHHHHHHTTTC-CEEEEESSC
T ss_pred HHHHHHHhcccCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCc
Confidence 4555554 365433456889999999999999999999999998 588888543
No 132
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=91.73 E-value=0.42 Score=46.19 Aligned_cols=71 Identities=18% Similarity=0.128 Sum_probs=48.4
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhC---CCCeEEEEe
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGI-GSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELN---DAVKAKFIE 101 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv-~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lN---p~v~v~~~~ 101 (462)
.+|.|+|+|.+|..++..|+..|. +++.|+|-+ ..|++..+..|.+.. ..++++.
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~-------------------~~k~~g~a~dl~~~~~~~~~~~v~~-- 59 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLD-------------------RKLAQAHAEDILHATPFAHPVWVWA-- 59 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS-------------------HHHHHHHHHHHHTTGGGSCCCEEEE--
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC-------------------hhHHHHHHHHHHHhHhhcCCeEEEE--
Confidence 379999999999999999998875 569999832 235555445555533 2444442
Q ss_pred cChhhhhcCCcCCCCCCcEEEEcC
Q 012484 102 EYPEALIEMNPPFFSQFTLVVATQ 125 (462)
Q Consensus 102 ~~~~~~~~~~~~~~~~~dvVi~~~ 125 (462)
. +.+-++++|+||.+.
T Consensus 60 ~--------~~~a~~~aD~Vii~a 75 (310)
T 2xxj_A 60 G--------SYGDLEGARAVVLAA 75 (310)
T ss_dssp C--------CGGGGTTEEEEEECC
T ss_pred C--------CHHHhCCCCEEEECC
Confidence 1 123477999999765
No 133
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.72 E-value=0.56 Score=48.00 Aligned_cols=98 Identities=12% Similarity=0.114 Sum_probs=66.5
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecC
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY 103 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~ 103 (462)
..++|+|+|.|-+|..+|+.|-. + .++++++.|. .|++.++ +..|.+.+ +..+
T Consensus 234 ~~~~v~I~GgG~ig~~lA~~L~~-~-~~v~iIE~d~-------------------~r~~~la----~~l~~~~V--i~GD 286 (461)
T 4g65_A 234 PYRRIMIVGGGNIGASLAKRLEQ-T-YSVKLIERNL-------------------QRAEKLS----EELENTIV--FCGD 286 (461)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTT-T-SEEEEEESCH-------------------HHHHHHH----HHCTTSEE--EESC
T ss_pred cccEEEEEcchHHHHHHHHHhhh-c-CceEEEecCH-------------------HHHHHHH----HHCCCceE--Eecc
Confidence 35789999999999999999853 3 5788887433 3554444 44455543 3333
Q ss_pred hhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEEEE
Q 012484 104 PEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFA 148 (462)
Q Consensus 104 ~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~ 148 (462)
..+..-..++-+.++|++|+++.+.+.-....-+|++.|++-+.+
T Consensus 287 ~td~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 287 AADQELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp TTCHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred ccchhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCccccc
Confidence 221110123446789999999988888888888999999875544
No 134
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=91.72 E-value=0.49 Score=44.83 Aligned_cols=30 Identities=17% Similarity=0.371 Sum_probs=27.2
Q ss_pred CcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEe
Q 012484 26 ASVCLLNC-GPTGSETLKNLVLGGIGSITVID 56 (462)
Q Consensus 26 ~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD 56 (462)
.+|.|||+ |.+|+.+++.|...|. +++++|
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~ 42 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH-HLAAIE 42 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS-EEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEE
Confidence 48999999 9999999999999996 688876
No 135
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=91.66 E-value=0.074 Score=51.97 Aligned_cols=52 Identities=17% Similarity=0.273 Sum_probs=40.7
Q ss_pred hhhhHHhh--cCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 7 KYDRQLRI--WGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 7 rYdRQl~l--~G~~~q~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
.|+|+.+- |.......|.+++|.|||+|.+|..+|+.|...|. +++.+|...
T Consensus 120 ~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~ 173 (324)
T 3hg7_A 120 LYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHFGM-KVLGVSRSG 173 (324)
T ss_dssp HHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred HHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhCCC-EEEEEcCCh
Confidence 45555543 65433457889999999999999999999999998 688888654
No 136
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=91.66 E-value=0.12 Score=50.16 Aligned_cols=37 Identities=16% Similarity=0.264 Sum_probs=30.9
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
+....+|.|||+|.+|..++++|+..|. .++++|.+.
T Consensus 28 ~~~~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~ 64 (320)
T 4dll_A 28 DPYARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTP 64 (320)
T ss_dssp -CCCSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCH
T ss_pred ccCCCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCH
Confidence 3445689999999999999999999997 688888543
No 137
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=91.62 E-value=0.17 Score=48.04 Aligned_cols=32 Identities=16% Similarity=0.223 Sum_probs=30.1
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
+++|+|+|+||.|..++..|...| .++++++.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G-~~v~V~nR 149 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQG-LQVSVLNR 149 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 789999999999999999999999 99999863
No 138
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=91.61 E-value=0.13 Score=49.55 Aligned_cols=35 Identities=17% Similarity=0.254 Sum_probs=30.4
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
...+|.|||+|.+|..++++|...|. .++++|.+.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 35689999999999999999999997 688888543
No 139
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=91.59 E-value=0.58 Score=48.14 Aligned_cols=33 Identities=15% Similarity=0.281 Sum_probs=29.4
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
.+|.|||+|.+|+.++.+|+..|. .++++|.+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~-~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 479999999999999999999997 589998643
No 140
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=91.55 E-value=1.4 Score=42.21 Aligned_cols=36 Identities=22% Similarity=0.252 Sum_probs=30.7
Q ss_pred HHhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 22 ALEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 22 ~L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.+.+.+|+|.|+ |++|+.+++.|+..|. +++++|..
T Consensus 17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~-~V~~~~r~ 53 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNLIEHWLPQGH-EILVIDNF 53 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHHHHHHGGGTC-EEEEEECC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 567789999996 8899999999999994 78888764
No 141
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.47 E-value=0.16 Score=48.06 Aligned_cols=33 Identities=15% Similarity=0.193 Sum_probs=30.3
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEe
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVID 56 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD 56 (462)
+..++|+|+|+|++|..++..|...| .+++++|
T Consensus 117 l~~k~vlViGaGg~g~a~a~~L~~~G-~~V~v~~ 149 (271)
T 1nyt_A 117 RPGLRILLIGAGGASRGVLLPLLSLD-CAVTITN 149 (271)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcC-CEEEEEE
Confidence 46789999999999999999999999 7899986
No 142
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=91.46 E-value=0.73 Score=44.71 Aligned_cols=73 Identities=19% Similarity=0.296 Sum_probs=51.1
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHh-CCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEec
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLG-GIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 102 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~-Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~ 102 (462)
...+|+|||+|+.|...++.|... ++.+++++|.+ ..|++.+++.+.... +.+. ..
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-------------------~~~a~~la~~~~~~~--~~~~-~~- 180 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVR-------------------EKAAKKFVSYCEDRG--ISAS-VQ- 180 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSS-------------------HHHHHHHHHHHHHTT--CCEE-EC-
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCC-------------------HHHHHHHHHHHHhcC--ceEE-EC-
Confidence 457899999999999999999874 78999998732 236777777665421 3333 22
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCCC
Q 012484 103 YPEALIEMNPPFFSQFTLVVATQLG 127 (462)
Q Consensus 103 ~~~~~~~~~~~~~~~~dvVi~~~~~ 127 (462)
+.. +.+ ++|+|++|+.+
T Consensus 181 ~~~-------e~v-~aDvVi~aTp~ 197 (322)
T 1omo_A 181 PAE-------EAS-RCDVLVTTTPS 197 (322)
T ss_dssp CHH-------HHT-SSSEEEECCCC
T ss_pred CHH-------HHh-CCCEEEEeeCC
Confidence 222 235 78999988765
No 143
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=91.27 E-value=0.63 Score=47.74 Aligned_cols=33 Identities=12% Similarity=0.243 Sum_probs=29.5
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..+|.|||+|.+|+.++.+|+..|. .++++|.+
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~-~V~v~dr~ 37 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGY-TVAIYNRT 37 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCC-EEEEEcCC
Confidence 4689999999999999999999998 58888854
No 144
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=91.26 E-value=0.24 Score=49.16 Aligned_cols=52 Identities=17% Similarity=0.202 Sum_probs=39.9
Q ss_pred hhhhHHhh--cCHHHH----HHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 7 KYDRQLRI--WGEQGQ----AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 7 rYdRQl~l--~G~~~q----~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.|+++++- |..... ..|..++|.|||+|.+|..+|+.|...|..+++.+|..
T Consensus 140 ~~~~~~~~g~W~~~~~~~~~~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~ 197 (364)
T 2j6i_A 140 PAHEQIINHDWEVAAIAKDAYDIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQ 197 (364)
T ss_dssp HHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSS
T ss_pred HHHHHHHhCCCCcCcccCCcccCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCC
Confidence 35555543 764322 25889999999999999999999999997668888743
No 145
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=91.23 E-value=1.5 Score=45.91 Aligned_cols=87 Identities=13% Similarity=0.097 Sum_probs=59.0
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecChh
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYPE 105 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~~~ 105 (462)
.+|+|+|+|-+|..+++.|...|.. ++++|.|.-....+. + ++..+..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~-v~vid~d~~~~~~~~--------------------------~-----~i~gD~t 396 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVP-FILIDRQESPVCNDH--------------------------V-----VVYGDAT 396 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCC-EEEEESSCCSSCCSS--------------------------C-----EEESCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCC-EEEEECChHHHhhcC--------------------------C-----EEEeCCC
Confidence 7999999999999999999999975 899997654322221 1 1221111
Q ss_pred hhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCce
Q 012484 106 ALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVM 144 (462)
Q Consensus 106 ~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip 144 (462)
+..-....-+.++|.+|++..+.+.-..+...+++.+.+
T Consensus 397 ~~~~L~~agi~~ad~vi~~~~~d~~ni~~~~~ak~l~~~ 435 (565)
T 4gx0_A 397 VGQTLRQAGIDRASGIIVTTNDDSTNIFLTLACRHLHSH 435 (565)
T ss_dssp SSTHHHHHTTTSCSEEEECCSCHHHHHHHHHHHHHHCSS
T ss_pred CHHHHHhcCccccCEEEEECCCchHHHHHHHHHHHHCCC
Confidence 000000122568999999888877777788889998864
No 146
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=91.17 E-value=0.51 Score=43.14 Aligned_cols=105 Identities=15% Similarity=0.101 Sum_probs=58.4
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEe
Q 012484 23 LEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIE 101 (462)
Q Consensus 23 L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~ 101 (462)
+..++|+|.| .|++|..+++.|+..|--++++++.+.-....+. .+. +..+.
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-------------------------~~~--~~~~~ 73 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-------------------------PTN--SQIIM 73 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-------------------------CTT--EEEEE
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-------------------------cCC--cEEEE
Confidence 3456899999 5899999999999999547888775432211110 011 22232
Q ss_pred cChhhhhcCCcCCCCCCcEEEEcCCChH---HHHHHHHHHHHcCc-eEEEEeeccceE
Q 012484 102 EYPEALIEMNPPFFSQFTLVVATQLGEE---KMIKLDRICREANV-MLIFARSYGLTG 155 (462)
Q Consensus 102 ~~~~~~~~~~~~~~~~~dvVi~~~~~~~---~~~~l~~~~~~~~i-p~i~~~~~G~~G 155 (462)
.+..+.. .-...++++|+||.+..... ....+.+.+++.++ .+|..++.+.+|
T Consensus 74 ~Dl~d~~-~~~~~~~~~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~ 130 (236)
T 3qvo_A 74 GDVLNHA-ALKQAMQGQDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYD 130 (236)
T ss_dssp CCTTCHH-HHHHHHTTCSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCCC--
T ss_pred ecCCCHH-HHHHHhcCCCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEecceecC
Confidence 2221100 00123557788886543222 23345667777775 477777766554
No 147
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=91.17 E-value=0.18 Score=50.76 Aligned_cols=35 Identities=26% Similarity=0.432 Sum_probs=32.6
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
+...+|+|+|+|++|..+++.|...|+++++++|.
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r 199 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANR 199 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECS
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 57899999999999999999999999999999873
No 148
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=91.10 E-value=0.65 Score=44.17 Aligned_cols=29 Identities=28% Similarity=0.378 Sum_probs=23.5
Q ss_pred CcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEe
Q 012484 26 ASVCLLNC-GPTGSETLKNLVLGGIGSITVID 56 (462)
Q Consensus 26 ~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD 56 (462)
++|+|.|+ |.+|+.+++.|...| .++.++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~ 31 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN--EIVVID 31 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS--CEEEEC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC--CEEEEE
Confidence 37999985 889999999999999 455554
No 149
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=91.00 E-value=0.19 Score=48.16 Aligned_cols=32 Identities=22% Similarity=0.379 Sum_probs=29.0
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.+|.|||+|.+|+.++++|...|. +++++|.+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC-eEEEEcCC
Confidence 589999999999999999999997 78888854
No 150
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=90.94 E-value=0.16 Score=43.00 Aligned_cols=40 Identities=20% Similarity=0.363 Sum_probs=29.1
Q ss_pred HHHHHHhcCcEEEEcC----ChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 18 QGQAALEKASVCLLNC----GPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 18 ~~q~~L~~~~VlivG~----g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.|...++..+|.|||+ |.+|..+++||...|. ++.-+|+.
T Consensus 7 ~~~~l~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~-~V~~vnp~ 50 (138)
T 1y81_A 7 HGSNSKEFRKIALVGASKNPAKYGNIILKDLLSKGF-EVLPVNPN 50 (138)
T ss_dssp -------CCEEEEETCCSCTTSHHHHHHHHHHHTTC-EEEEECTT
T ss_pred ccccccCCCeEEEEeecCCCCCHHHHHHHHHHHCCC-EEEEeCCC
Confidence 4556778899999999 9999999999999999 46666654
No 151
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=90.88 E-value=0.17 Score=49.74 Aligned_cols=51 Identities=20% Similarity=0.249 Sum_probs=37.3
Q ss_pred hhhhHHhh--cCHH-HH---HHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 7 KYDRQLRI--WGEQ-GQ---AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 7 rYdRQl~l--~G~~-~q---~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.|+|++|- |... .. ..|..++|.|||+|.+|..+|+.|...|. ++..+|..
T Consensus 147 ~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~ 203 (340)
T 4dgs_A 147 DGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEAFGM-SVRYWNRS 203 (340)
T ss_dssp HHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSS
T ss_pred HHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 35555543 6543 11 46889999999999999999999999887 58888753
No 152
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=90.87 E-value=0.24 Score=46.07 Aligned_cols=37 Identities=16% Similarity=0.197 Sum_probs=30.4
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 21 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 21 ~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..+...+|.|||+|.+|+.++++|+..|. .++++|.+
T Consensus 15 ~~~~~~kIgiIG~G~mG~alA~~L~~~G~-~V~~~~r~ 51 (245)
T 3dtt_A 15 LYFQGMKIAVLGTGTVGRTMAGALADLGH-EVTIGTRD 51 (245)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 47889999999999999999999999996 68888854
No 153
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=90.80 E-value=0.19 Score=47.25 Aligned_cols=33 Identities=21% Similarity=0.292 Sum_probs=30.0
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
++. +|+|+|+|++|..+++.|...|+ +++++|.
T Consensus 115 l~~-~v~iiG~G~~g~~~a~~l~~~g~-~v~v~~r 147 (263)
T 2d5c_A 115 LKG-PALVLGAGGAGRAVAFALREAGL-EVWVWNR 147 (263)
T ss_dssp CCS-CEEEECCSHHHHHHHHHHHHTTC-CEEEECS
T ss_pred CCC-eEEEECCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 566 99999999999999999999998 8999873
No 154
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=90.79 E-value=0.15 Score=48.31 Aligned_cols=34 Identities=18% Similarity=0.216 Sum_probs=31.0
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
++.++|+|+|+|++|..++..|...| .+++++|.
T Consensus 117 ~~~~~vlvlGaGg~g~a~a~~L~~~G-~~v~v~~R 150 (272)
T 1p77_A 117 RPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANR 150 (272)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEES
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEEC
Confidence 46789999999999999999999999 89999873
No 155
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=90.61 E-value=0.7 Score=44.77 Aligned_cols=103 Identities=14% Similarity=0.081 Sum_probs=59.0
Q ss_pred HhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEe
Q 012484 23 LEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIE 101 (462)
Q Consensus 23 L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~ 101 (462)
|...+|+|.|+ |.+|+.+++.|...| .++++++.+.-. ...|+..+ +.+. .+.+++ +.
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~---------------~~~~~~~~-~~l~--~~~v~~--~~ 66 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAH-RPTYILARPGPR---------------SPSKAKIF-KALE--DKGAII--VY 66 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECSSCC---------------CHHHHHHH-HHHH--HTTCEE--EE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECCCCC---------------ChhHHHHH-HHHH--hCCcEE--EE
Confidence 45679999997 889999999999999 567777643200 01122211 1222 234443 33
Q ss_pred cChhhhhcCCcCCCC--CCcEEEEcCC--ChHHHHHHHHHHHHcC-ceEEE
Q 012484 102 EYPEALIEMNPPFFS--QFTLVVATQL--GEEKMIKLDRICREAN-VMLIF 147 (462)
Q Consensus 102 ~~~~~~~~~~~~~~~--~~dvVi~~~~--~~~~~~~l~~~~~~~~-ip~i~ 147 (462)
.+..+.. .-...++ ++|+||.+.. +......+-+.|++.+ ++.+.
T Consensus 67 ~Dl~d~~-~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v 116 (346)
T 3i6i_A 67 GLINEQE-AMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFL 116 (346)
T ss_dssp CCTTCHH-HHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEE
T ss_pred eecCCHH-HHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEe
Confidence 2221110 0113455 8999997654 3445667788898888 76554
No 156
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=90.59 E-value=0.23 Score=47.56 Aligned_cols=36 Identities=19% Similarity=0.292 Sum_probs=32.4
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.|..++|+|+|+|.+|..+++.|...|. +++++|..
T Consensus 152 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~ 187 (293)
T 3d4o_A 152 TIHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARE 187 (293)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECC
Confidence 4778999999999999999999999998 89998843
No 157
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=90.53 E-value=0.11 Score=50.77 Aligned_cols=50 Identities=12% Similarity=0.177 Sum_probs=38.9
Q ss_pred hhHHhh--cCHHH-HHHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 9 DRQLRI--WGEQG-QAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 9 dRQl~l--~G~~~-q~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
+|+.+- |.... ...|.+++|.|||+|.+|..+|+.|...|. +++.+|...
T Consensus 118 ~~~~~~~~W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l~~~G~-~V~~~dr~~ 170 (324)
T 3evt_A 118 LNQRGARQWALPMTTSTLTGQQLLIYGTGQIGQSLAAKASALGM-HVIGVNTTG 170 (324)
T ss_dssp HHHTTTCCSSCSSCCCCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSC
T ss_pred HHHHhcCCcccCCCCccccCCeEEEECcCHHHHHHHHHHHhCCC-EEEEECCCc
Confidence 555443 65432 446889999999999999999999999998 688888643
No 158
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=90.47 E-value=0.26 Score=42.88 Aligned_cols=32 Identities=28% Similarity=0.560 Sum_probs=29.2
Q ss_pred cEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 27 SVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 27 ~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
+|+|||.|..|.++|..|.+.|. +++|+|...
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~-~v~lie~~~ 34 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGL-KVLVLDGGR 34 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-CEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence 79999999999999999999997 699999654
No 159
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=90.47 E-value=0.6 Score=45.29 Aligned_cols=34 Identities=18% Similarity=0.177 Sum_probs=29.1
Q ss_pred HhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 23 LEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 23 L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
+...+|+|.|+ |.+|+.+++.|...|. +++++|.
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r 59 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDN 59 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 66788999997 8899999999999995 6777764
No 160
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=90.44 E-value=0.15 Score=50.20 Aligned_cols=52 Identities=15% Similarity=0.254 Sum_probs=39.4
Q ss_pred hhhhHHh-----hcCH-HHHHHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 7 KYDRQLR-----IWGE-QGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 7 rYdRQl~-----l~G~-~~q~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
.|+|++| -|.. .....|.+++|.|||+|.+|..+|+.|...|. +++.+|...
T Consensus 124 ~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~G~-~V~~~d~~~ 181 (343)
T 2yq5_A 124 EFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSAMGA-KVIAYDVAY 181 (343)
T ss_dssp HHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred HHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhhCCC-EEEEECCCh
Confidence 4666665 3521 11235889999999999999999999999997 688888643
No 161
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=90.36 E-value=0.9 Score=44.48 Aligned_cols=93 Identities=14% Similarity=0.046 Sum_probs=53.8
Q ss_pred HHHhcCcEEEEcCChhHH-HHHHHHHHh-CCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEE
Q 012484 21 AALEKASVCLLNCGPTGS-ETLKNLVLG-GIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAK 98 (462)
Q Consensus 21 ~~L~~~~VlivG~g~lG~-eiaknLvl~-Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~ 98 (462)
..++..+|.|||+|.+|. ..+..|... |+.=+.++|.+. .|++.+++.. .+.
T Consensus 23 ~~m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~-------------------~~~~~~a~~~-----g~~-- 76 (350)
T 3rc1_A 23 ANANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRW-------------------DRAKRFTERF-----GGE-- 76 (350)
T ss_dssp ---CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSH-------------------HHHHHHHHHH-----CSE--
T ss_pred CCCCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCH-------------------HHHHHHHHHc-----CCC--
Confidence 345667999999999998 789999876 443333555322 2444443332 222
Q ss_pred EEecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEE
Q 012484 99 FIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLI 146 (462)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i 146 (462)
.. .+.+++.+. .+.|+|+.|+.+ .....+...|.+.|++++
T Consensus 77 ~~-~~~~~ll~~-----~~~D~V~i~tp~-~~h~~~~~~al~aGk~Vl 117 (350)
T 3rc1_A 77 PV-EGYPALLER-----DDVDAVYVPLPA-VLHAEWIDRALRAGKHVL 117 (350)
T ss_dssp EE-ESHHHHHTC-----TTCSEEEECCCG-GGHHHHHHHHHHTTCEEE
T ss_pred Cc-CCHHHHhcC-----CCCCEEEECCCc-HHHHHHHHHHHHCCCcEE
Confidence 12 233444321 257888887755 344555666777777643
No 162
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=90.18 E-value=1.5 Score=43.07 Aligned_cols=37 Identities=27% Similarity=0.434 Sum_probs=30.7
Q ss_pred HHhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 22 ALEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 22 ~L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.++..+|+|.|+ |.+|+.+++.|...|..+++++|..
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 66 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNL 66 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECC
Confidence 456678999995 8899999999999995578888753
No 163
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=90.18 E-value=0.63 Score=41.84 Aligned_cols=101 Identities=14% Similarity=0.097 Sum_probs=57.1
Q ss_pred CcEEEEc-CChhHHHHHHHHH-HhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecC
Q 012484 26 ASVCLLN-CGPTGSETLKNLV-LGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY 103 (462)
Q Consensus 26 ~~VlivG-~g~lG~eiaknLv-l~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~ 103 (462)
++|+|.| .|++|.++++.|+ ..|. ++++++.+.-+ +. +.+....+.+. .+..+
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~------------------~~----~~~~~~~~~~~--~~~~D 60 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKT------------------RI----PPEIIDHERVT--VIEGS 60 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHH------------------HS----CHHHHTSTTEE--EEECC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccc------------------cc----hhhccCCCceE--EEECC
Confidence 4599999 5899999999999 8887 68877643110 00 11112233333 33332
Q ss_pred hhhhhcCCcCCCCCCcEEEEcCCC--hHHHHHHHHHHHHcCc-eEEEEeeccc
Q 012484 104 PEALIEMNPPFFSQFTLVVATQLG--EEKMIKLDRICREANV-MLIFARSYGL 153 (462)
Q Consensus 104 ~~~~~~~~~~~~~~~dvVi~~~~~--~~~~~~l~~~~~~~~i-p~i~~~~~G~ 153 (462)
..+.. .-...+.++|+||.+... .. ...+.+.+++.+. .+|..++.+.
T Consensus 61 ~~d~~-~~~~~~~~~d~vv~~ag~~n~~-~~~~~~~~~~~~~~~iv~iSs~~~ 111 (221)
T 3r6d_A 61 FQNPG-XLEQAVTNAEVVFVGAMESGSD-MASIVKALSRXNIRRVIGVSMAGL 111 (221)
T ss_dssp TTCHH-HHHHHHTTCSEEEESCCCCHHH-HHHHHHHHHHTTCCEEEEEEETTT
T ss_pred CCCHH-HHHHHHcCCCEEEEcCCCCChh-HHHHHHHHHhcCCCeEEEEeecee
Confidence 21110 001245678999976543 23 4455566777765 4666665554
No 164
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=90.17 E-value=1.9 Score=43.83 Aligned_cols=33 Identities=15% Similarity=0.262 Sum_probs=29.6
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
.+|+|||+|.+|..+|.+|+..|. .++++|.+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~-~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGA-NVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCC-EEEEEECCH
Confidence 589999999999999999999996 789998654
No 165
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=90.14 E-value=0.44 Score=45.13 Aligned_cols=101 Identities=13% Similarity=0.152 Sum_probs=56.4
Q ss_pred cCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHh-CCCCeEEEEec
Q 012484 25 KASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQEL-NDAVKAKFIEE 102 (462)
Q Consensus 25 ~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~l-Np~v~v~~~~~ 102 (462)
..+|+|.|+ |.+|+.+++.|...| .++++++.+.-.. + ...|++ .+.++ .+.+++ +..
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~----~---------~~~~~~----~~~~l~~~~v~~--v~~ 63 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLG-HPTFLLVRESTAS----S---------NSEKAQ----LLESFKASGANI--VHG 63 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCCCCTT----T---------THHHHH----HHHHHHTTTCEE--ECC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC-CCEEEEECCcccc----c---------CHHHHH----HHHHHHhCCCEE--EEe
Confidence 367999996 889999999999999 4677765432100 0 011222 22222 344543 322
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCCCh--HHHHHHHHHHHHcC-ceEE
Q 012484 103 YPEALIEMNPPFFSQFTLVVATQLGE--EKMIKLDRICREAN-VMLI 146 (462)
Q Consensus 103 ~~~~~~~~~~~~~~~~dvVi~~~~~~--~~~~~l~~~~~~~~-ip~i 146 (462)
+..+.. .-...++++|+||.+.... .....+.+.|++.+ ++-+
T Consensus 64 D~~d~~-~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~ 109 (308)
T 1qyc_A 64 SIDDHA-SLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRF 109 (308)
T ss_dssp CTTCHH-HHHHHHHTCSEEEECCCGGGSGGGHHHHHHHHHHCCCSEE
T ss_pred ccCCHH-HHHHHHcCCCEEEECCcchhhhhHHHHHHHHHhcCCCceE
Confidence 221100 0112356789999765432 33456677888887 6544
No 166
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=90.14 E-value=0.26 Score=47.34 Aligned_cols=36 Identities=22% Similarity=0.312 Sum_probs=32.3
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.|..++|+|+|+|.+|..+++.|...|. +++++|..
T Consensus 154 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~ 189 (300)
T 2rir_A 154 TIHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARS 189 (300)
T ss_dssp CSTTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECC
Confidence 4778999999999999999999999998 79998843
No 167
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=90.14 E-value=0.25 Score=50.91 Aligned_cols=31 Identities=19% Similarity=0.366 Sum_probs=28.4
Q ss_pred cEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 27 SVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 27 ~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
+|.|||+|.+|+.++.+|+..|. .++++|.+
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~-~V~v~dr~ 33 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGF-KVAVFNRT 33 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred EEEEEChHHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 79999999999999999999997 58999864
No 168
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=90.13 E-value=1 Score=43.27 Aligned_cols=31 Identities=23% Similarity=0.405 Sum_probs=27.2
Q ss_pred cEEEEc-CChhHHHHHHHHHHhCCC-eEEEEeC
Q 012484 27 SVCLLN-CGPTGSETLKNLVLGGIG-SITVIDG 57 (462)
Q Consensus 27 ~VlivG-~g~lG~eiaknLvl~Gv~-~itlvD~ 57 (462)
+|+|+| +|.+|+.++..|+..|.. ++.|+|.
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di 34 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDI 34 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECC
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcC
Confidence 799999 999999999999988864 5899884
No 169
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=90.11 E-value=0.67 Score=43.82 Aligned_cols=102 Identities=16% Similarity=0.130 Sum_probs=57.1
Q ss_pred cCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccc-cHHHHHHHHHHHhCCCCeEEEEec
Q 012484 25 KASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGE-SKAKSVCAFLQELNDAVKAKFIEE 102 (462)
Q Consensus 25 ~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~-~Ka~~~~~~l~~lNp~v~v~~~~~ 102 (462)
..+|+|.|+ |.+|..+++.|...|. ++++++.+.-... .. .|++.+ ..+. .+.+++. ..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~-------------~~~~~~~~~-~~l~--~~~v~~v--~~ 62 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGN-PTYALVRKTITAA-------------NPETKEELI-DNYQ--SLGVILL--EG 62 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECCSCCSS-------------CHHHHHHHH-HHHH--HTTCEEE--EC
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCC-cEEEEECCCcccC-------------ChHHHHHHH-HHHH--hCCCEEE--Ee
Confidence 357999996 8899999999999994 6777654321000 00 133222 1222 2345433 22
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCCC--hHHHHHHHHHHHHcC-ceEE
Q 012484 103 YPEALIEMNPPFFSQFTLVVATQLG--EEKMIKLDRICREAN-VMLI 146 (462)
Q Consensus 103 ~~~~~~~~~~~~~~~~dvVi~~~~~--~~~~~~l~~~~~~~~-ip~i 146 (462)
+..+. +.-...+++.|+||.+... ......+.+.|++.+ ++-+
T Consensus 63 D~~d~-~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~ 108 (307)
T 2gas_A 63 DINDH-ETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKF 108 (307)
T ss_dssp CTTCH-HHHHHHHTTCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEE
T ss_pred CCCCH-HHHHHHHhCCCEEEECCcccccccHHHHHHHHHhcCCceEE
Confidence 22110 0012345689999976532 344566777888877 5533
No 170
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=89.95 E-value=0.13 Score=49.92 Aligned_cols=35 Identities=14% Similarity=0.163 Sum_probs=31.3
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
.|.+++|.|||+|.+|..+|+.|...|. +++.+|.
T Consensus 139 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~ 173 (313)
T 2ekl_A 139 ELAGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDI 173 (313)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECC
Confidence 5888999999999999999999999996 5777774
No 171
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=89.84 E-value=0.14 Score=49.56 Aligned_cols=52 Identities=17% Similarity=0.325 Sum_probs=38.7
Q ss_pred hhhhHHhh--cCHH-HHHHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 7 KYDRQLRI--WGEQ-GQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 7 rYdRQl~l--~G~~-~q~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
+|+|+++- |... ....|..++|.|||+|.+|..+|+.|...|. ++..+|...
T Consensus 103 ~~~~~~~~g~w~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~dr~~ 157 (303)
T 1qp8_A 103 QYGEKMKRGDYGRDVEIPLIQGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTP 157 (303)
T ss_dssp HHHHHHHTTCCCCCSCCCCCTTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred HHHHHHHcCCCCCCCCCCCCCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCc
Confidence 35555543 6322 1235889999999999999999999999997 588887543
No 172
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=89.76 E-value=0.3 Score=46.41 Aligned_cols=32 Identities=25% Similarity=0.354 Sum_probs=29.1
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.+|.|||+|.+|+.+|..|+..|. +++++|.+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 689999999999999999999998 78998843
No 173
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=89.64 E-value=1.7 Score=43.94 Aligned_cols=99 Identities=10% Similarity=0.093 Sum_probs=56.4
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHh-CCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhC-CCCeEE
Q 012484 21 AALEKASVCLLNCGPTGSETLKNLVLG-GIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELN-DAVKAK 98 (462)
Q Consensus 21 ~~L~~~~VlivG~g~lG~eiaknLvl~-Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lN-p~v~v~ 98 (462)
..++.-+|.|||+|.+|...+..|... |+.=+.++|. ...|++.+++.+.+.+ |.+.
T Consensus 16 ~~~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~-------------------~~~~~~~~a~~~~~~g~~~~~-- 74 (444)
T 2ixa_A 16 FNPKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADP-------------------DPYMVGRAQEILKKNGKKPAK-- 74 (444)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS-------------------CHHHHHHHHHHHHHTTCCCCE--
T ss_pred CCCCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeC-------------------CHHHHHHHHHHHHhcCCCCCc--
Confidence 445667999999999999999988763 4433344542 2336666666665443 3333
Q ss_pred EEec---ChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEE
Q 012484 99 FIEE---YPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLI 146 (462)
Q Consensus 99 ~~~~---~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i 146 (462)
.... +.+++.+. .+.|+|+.++.+ .....+...|-+.|+.++
T Consensus 75 ~~~~~~~~~~~ll~~-----~~vD~V~i~tp~-~~h~~~~~~al~aGkhV~ 119 (444)
T 2ixa_A 75 VFGNGNDDYKNMLKD-----KNIDAVFVSSPW-EWHHEHGVAAMKAGKIVG 119 (444)
T ss_dssp EECSSTTTHHHHTTC-----TTCCEEEECCCG-GGHHHHHHHHHHTTCEEE
T ss_pred eeccCCCCHHHHhcC-----CCCCEEEEcCCc-HHHHHHHHHHHHCCCeEE
Confidence 2220 23333221 157888877754 344555556667777543
No 174
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=89.61 E-value=1.5 Score=38.75 Aligned_cols=34 Identities=18% Similarity=0.196 Sum_probs=28.5
Q ss_pred cCcEEEEc-CChhHHHHHHHHHHhCC-CeEEEEeCC
Q 012484 25 KASVCLLN-CGPTGSETLKNLVLGGI-GSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG-~g~lG~eiaknLvl~Gv-~~itlvD~d 58 (462)
..+|+|.| .|++|.++++.|...|. .++++++.+
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~ 40 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARK 40 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSS
T ss_pred CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 46899998 68899999999999997 478877643
No 175
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=89.59 E-value=2.6 Score=40.69 Aligned_cols=37 Identities=14% Similarity=-0.003 Sum_probs=30.9
Q ss_pred HHHhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 21 AALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 21 ~~L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..+.+.+|+|.| .|.+|+.+++.|...|. ++++++..
T Consensus 5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 42 (357)
T 1rkx_A 5 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLT 42 (357)
T ss_dssp HHHTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred hhhCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCC
Confidence 356778999999 58899999999999996 68888753
No 176
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=89.46 E-value=0.96 Score=42.08 Aligned_cols=31 Identities=16% Similarity=0.205 Sum_probs=25.4
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEE-EeC
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITV-IDG 57 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itl-vD~ 57 (462)
.+|+|+|+|.+|..+++.+...+- .++- +|.
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~ 35 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGH-EIVGVIEN 35 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEECS
T ss_pred eEEEEECcCHHHHHHHHHHHhCCC-EEEEEEec
Confidence 589999999999999999998775 5553 553
No 177
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=89.43 E-value=0.61 Score=43.60 Aligned_cols=58 Identities=10% Similarity=0.119 Sum_probs=41.2
Q ss_pred HhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEE
Q 012484 23 LEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFI 100 (462)
Q Consensus 23 L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~ 100 (462)
|++++|+|.|+ ||+|.++++.|+..|. ++.++|.+ ..+.+.+.+.+.+..+...+..+
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~ 66 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRR-------------------EENVNETIKEIRAQYPDAILQPV 66 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESS-------------------HHHHHHHHHHHHHHCTTCEEEEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhhCCCceEEEE
Confidence 56678888884 8899999999999997 47777632 23455566667777666554443
No 178
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=89.40 E-value=0.49 Score=45.82 Aligned_cols=34 Identities=24% Similarity=0.327 Sum_probs=29.7
Q ss_pred cCcEEEEcCChhHHHHHHHHHHh-CCCeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLG-GIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~-Gv~~itlvD~d 58 (462)
.++|+|||+|..|...++.|... ++.+++++|.+
T Consensus 121 ~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~ 155 (313)
T 3hdj_A 121 SSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY 155 (313)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT
T ss_pred CcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc
Confidence 57899999999999999999874 78999999744
No 179
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=89.40 E-value=0.28 Score=46.15 Aligned_cols=50 Identities=12% Similarity=0.054 Sum_probs=28.6
Q ss_pred chhhhHHhh-cCHHHHH-HHhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEe
Q 012484 6 TKYDRQLRI-WGEQGQA-ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 56 (462)
Q Consensus 6 ~rYdRQl~l-~G~~~q~-~L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD 56 (462)
..|.|+..- +|...+. .|+++.|+|.| .||+|.++++.|+..|. ++.++|
T Consensus 7 ~~~~~~~~~~~gp~~m~~~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~ 59 (270)
T 3ftp_A 7 HHMGTLEAQTQGPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGA-MVIGTA 59 (270)
T ss_dssp ----------------CCTTTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred cccccccCCCCCCcccccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEe
Confidence 345555544 7776554 46777788877 58899999999999998 577766
No 180
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=89.38 E-value=0.49 Score=45.51 Aligned_cols=31 Identities=19% Similarity=0.218 Sum_probs=25.9
Q ss_pred cEEEEcC-ChhHHHHHHHHHHh-CCCeEEEEeCC
Q 012484 27 SVCLLNC-GPTGSETLKNLVLG-GIGSITVIDGS 58 (462)
Q Consensus 27 ~VlivG~-g~lG~eiaknLvl~-Gv~~itlvD~d 58 (462)
+|+|.|+ |.+|+.+++.|... |. +++++|..
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~ 34 (345)
T 2bll_A 2 RVLILGVNGFIGNHLTERLLREDHY-EVYGLDIG 34 (345)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTC-EEEEEESC
T ss_pred eEEEECCCcHHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 6999996 88999999999998 64 68887754
No 181
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=89.33 E-value=0.34 Score=46.41 Aligned_cols=32 Identities=16% Similarity=0.305 Sum_probs=28.8
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.+|.|||+|.+|+.+|..|+..|. .++++|.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~-~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 579999999999999999999997 68998854
No 182
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=89.32 E-value=1.9 Score=42.23 Aligned_cols=94 Identities=18% Similarity=0.166 Sum_probs=52.6
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHH-H-hCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEE
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLV-L-GGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKF 99 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLv-l-~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~ 99 (462)
.++.-+|.|||+|.+|...+++|. . .|+.-+.++|.+ ..|++.+++.. +..+. .
T Consensus 20 ~m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~-------------------~~~~~~~a~~~---g~~~~--~ 75 (357)
T 3ec7_A 20 QGMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIV-------------------AGRAQAALDKY---AIEAK--D 75 (357)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSS-------------------TTHHHHHHHHH---TCCCE--E
T ss_pred CCCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCC-------------------HHHHHHHHHHh---CCCCe--e
Confidence 455678999999999999999998 4 455444466532 22444443332 21122 2
Q ss_pred EecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEE
Q 012484 100 IEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLI 146 (462)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i 146 (462)
.. +.+++.+. .+.|+|+.|+.+ .....+...|.+.|++++
T Consensus 76 ~~-~~~~ll~~-----~~~D~V~i~tp~-~~h~~~~~~al~aGk~Vl 115 (357)
T 3ec7_A 76 YN-DYHDLIND-----KDVEVVIITASN-EAHADVAVAALNANKYVF 115 (357)
T ss_dssp ES-SHHHHHHC-----TTCCEEEECSCG-GGHHHHHHHHHHTTCEEE
T ss_pred eC-CHHHHhcC-----CCCCEEEEcCCc-HHHHHHHHHHHHCCCCEE
Confidence 22 33333321 146788777654 344455556666776643
No 183
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=89.29 E-value=2.8 Score=43.14 Aligned_cols=33 Identities=18% Similarity=0.245 Sum_probs=27.7
Q ss_pred cCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 25 KASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..+|+|.| .|.+|+.+++.|...|. +++.++..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~-~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGH-EVIQLVRK 180 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 35899999 58899999999999997 67777644
No 184
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=89.25 E-value=0.33 Score=47.82 Aligned_cols=33 Identities=21% Similarity=0.339 Sum_probs=29.8
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
+-||+|||+|..|.-+|-.|.+.|+ +++|+|.+
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G~-~v~v~Er~ 33 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHGI-KVTIYERN 33 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEecC
Confidence 3589999999999999999999999 59999854
No 185
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=89.06 E-value=0.43 Score=47.05 Aligned_cols=49 Identities=22% Similarity=0.239 Sum_probs=38.4
Q ss_pred hhhHHhh--cCHHHH----HHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 8 YDRQLRI--WGEQGQ----AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 8 YdRQl~l--~G~~~q----~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
|+|+.+- |..... ..|.+++|.|||+|.+|..+|+.|...|.. ++.+|.
T Consensus 141 ~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~~G~~-V~~~dr 195 (351)
T 3jtm_A 141 GYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPFGCN-LLYHDR 195 (351)
T ss_dssp HHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGGCCE-EEEECS
T ss_pred HHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHHCCCE-EEEeCC
Confidence 4555543 765443 248899999999999999999999999985 777774
No 186
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=89.04 E-value=0.23 Score=48.68 Aligned_cols=49 Identities=16% Similarity=0.265 Sum_probs=36.6
Q ss_pred hhhHHhh--cCHHH--HHHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 8 YDRQLRI--WGEQG--QAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 8 YdRQl~l--~G~~~--q~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
|+|+++- |.... -..|..++|.|||+|.+|..+|+.|...|. +++.+|.
T Consensus 144 ~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~ 196 (335)
T 2g76_A 144 ATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQSFGM-KTIGYDP 196 (335)
T ss_dssp HHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECS
T ss_pred HHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECC
Confidence 4555443 64321 135889999999999999999999998885 5777774
No 187
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=89.01 E-value=0.64 Score=43.99 Aligned_cols=30 Identities=23% Similarity=0.299 Sum_probs=27.4
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEe
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVID 56 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD 56 (462)
.+|.|||+|.+|+.++++|...|. +++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGH-QLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTC-EEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCC-EEEEEc
Confidence 479999999999999999999996 688887
No 188
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=88.98 E-value=0.4 Score=43.91 Aligned_cols=34 Identities=24% Similarity=0.332 Sum_probs=30.6
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
+...|+|||.|..|.++|..|.+.|. +++++|..
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~-~v~lie~~ 35 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGV-RVGLLTQS 35 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC-CEEEEecC
Confidence 45689999999999999999999998 68999875
No 189
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=88.97 E-value=0.46 Score=46.49 Aligned_cols=36 Identities=22% Similarity=0.317 Sum_probs=31.4
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 21 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 21 ~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
..|...+|.|||+|.+|..++++|...|+ +++++|.
T Consensus 12 ~~l~~~~I~IIG~G~mG~alA~~L~~~G~-~V~~~~~ 47 (338)
T 1np3_A 12 SIIQGKKVAIIGYGSQGHAHACNLKDSGV-DVTVGLR 47 (338)
T ss_dssp HHHHTSCEEEECCSHHHHHHHHHHHHTTC-CEEEECC
T ss_pred chhcCCEEEEECchHHHHHHHHHHHHCcC-EEEEEEC
Confidence 45778899999999999999999999997 5777764
No 190
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=88.94 E-value=0.23 Score=47.36 Aligned_cols=33 Identities=9% Similarity=0.238 Sum_probs=30.0
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
++.++|+|+|+||+|..+++.|+..| +++++|.
T Consensus 126 l~~k~vlV~GaGgiG~aia~~L~~~G--~V~v~~r 158 (287)
T 1nvt_A 126 VKDKNIVIYGAGGAARAVAFELAKDN--NIIIANR 158 (287)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHTSSS--EEEEECS
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCC--CEEEEEC
Confidence 56789999999999999999999999 8999863
No 191
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=88.80 E-value=0.37 Score=46.98 Aligned_cols=32 Identities=25% Similarity=0.488 Sum_probs=28.7
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
..+|+|||+|++|+.++..|...|. .++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~-~V~~~~r 34 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGE-AINVLAR 34 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTC-CEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 4689999999999999999999996 6888873
No 192
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=88.78 E-value=1.6 Score=40.80 Aligned_cols=36 Identities=17% Similarity=0.194 Sum_probs=27.7
Q ss_pred HHhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 22 ALEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 22 ~L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.-..++|+|.|. |.+|+.+++.|...|. ++++++..
T Consensus 9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 45 (292)
T 1vl0_A 9 HHHHMKILITGANGQLGREIQKQLKGKNV-EVIPTDVQ 45 (292)
T ss_dssp ---CEEEEEESTTSHHHHHHHHHHTTSSE-EEEEECTT
T ss_pred ccccceEEEECCCChHHHHHHHHHHhCCC-eEEeccCc
Confidence 345678999985 8899999999999984 68887754
No 193
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=88.78 E-value=0.17 Score=49.99 Aligned_cols=36 Identities=14% Similarity=0.139 Sum_probs=31.8
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 21 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 21 ~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
..|.+++|.|||+|.+|..+|+.|...|. +++.+|.
T Consensus 156 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~ 191 (352)
T 3gg9_A 156 RVLKGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWGR 191 (352)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred ccCCCCEEEEEeECHHHHHHHHHHHhCCC-EEEEECC
Confidence 46889999999999999999999999997 5777773
No 194
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=88.73 E-value=1.2 Score=42.20 Aligned_cols=32 Identities=13% Similarity=0.004 Sum_probs=27.0
Q ss_pred cCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 25 KASVCLLNC-GPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 25 ~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
+.+|+|.|+ |.+|+.+++.|...| .+++++|.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 34 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNN-WHAVGCGF 34 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCC-CeEEEEcc
Confidence 468999996 889999999999999 46888774
No 195
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=88.69 E-value=0.2 Score=49.08 Aligned_cols=37 Identities=16% Similarity=0.214 Sum_probs=32.5
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 21 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 21 ~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|..
T Consensus 137 ~~l~g~tvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~ 173 (334)
T 2pi1_A 137 RELNRLTLGVIGTGRIGSRVAMYGLAFGM-KVLCYDVV 173 (334)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred eeccCceEEEECcCHHHHHHHHHHHHCcC-EEEEECCC
Confidence 36899999999999999999999999997 68888743
No 196
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=88.68 E-value=0.39 Score=46.69 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=29.2
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
+.-.+|.|||+|.+|+.+|.+|+..|. .++++|.+
T Consensus 4 ~~~~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~ 38 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIE 38 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSC
T ss_pred CCCceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 345789999999999999999999998 68998854
No 197
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=88.63 E-value=2.5 Score=39.49 Aligned_cols=98 Identities=16% Similarity=0.100 Sum_probs=55.9
Q ss_pred cEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecChh
Q 012484 27 SVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYPE 105 (462)
Q Consensus 27 ~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~~~ 105 (462)
+|+|.|+ |.+|+.+++.|...+-.++++++.+.-....+ ..+.+++ +..+..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-------------------------~~~~v~~--~~~D~~ 54 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-------------------------WRGKVSV--RQLDYF 54 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-------------------------GBTTBEE--EECCTT
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-------------------------hhCCCEE--EEcCCC
Confidence 6999995 88999999999987445677776443211110 1123333 222211
Q ss_pred hhhcCCcCCCCCCcEEEEcCCC-------hHHHHHHHHHHHHcCc-eEEEEeecc
Q 012484 106 ALIEMNPPFFSQFTLVVATQLG-------EEKMIKLDRICREANV-MLIFARSYG 152 (462)
Q Consensus 106 ~~~~~~~~~~~~~dvVi~~~~~-------~~~~~~l~~~~~~~~i-p~i~~~~~G 152 (462)
+. +.-...++++|+||.+... ......+-+.|++.++ .+|..++.|
T Consensus 55 d~-~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~ 108 (289)
T 3e48_A 55 NQ-ESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA 108 (289)
T ss_dssp CH-HHHHHHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred CH-HHHHHHHhCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence 10 0012346688999866432 1234466678888885 467666644
No 198
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=88.49 E-value=0.4 Score=48.56 Aligned_cols=39 Identities=15% Similarity=0.392 Sum_probs=36.0
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHhCC--CeEEEEeCCc
Q 012484 21 AALEKASVCLLNCGPTGSETLKNLVLGGI--GSITVIDGSK 59 (462)
Q Consensus 21 ~~L~~~~VlivG~g~lG~eiaknLvl~Gv--~~itlvD~d~ 59 (462)
++|+..+|++.|+|+.|.-+++.|+..|+ ++|+++|..-
T Consensus 215 k~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~G 255 (487)
T 3nv9_A 215 KDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKG 255 (487)
T ss_dssp CCGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTE
T ss_pred CChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEeccc
Confidence 36889999999999999999999999999 8999999764
No 199
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=88.46 E-value=1 Score=43.32 Aligned_cols=34 Identities=18% Similarity=0.276 Sum_probs=29.6
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGI-GSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv-~~itlvD~d 58 (462)
..+|.|||+|.+|+.++..|+..|. ..++|+|-+
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~ 48 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLS 48 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 3689999999999999999999996 469999843
No 200
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=88.35 E-value=0.41 Score=45.06 Aligned_cols=32 Identities=22% Similarity=0.285 Sum_probs=29.0
Q ss_pred cEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 27 SVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 27 ~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
+|+|||+|.+|+.++..|...|. .++++|.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCC-CEEEEEcCc
Confidence 69999999999999999999997 799998654
No 201
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=88.27 E-value=1.6 Score=42.76 Aligned_cols=33 Identities=15% Similarity=0.159 Sum_probs=28.1
Q ss_pred cCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 25 KASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..+|+|.|+ |.+|+.+++.|...|. +++++|..
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 62 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEGH-YVIASDWK 62 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCeEEEECCccHHHHHHHHHHHHCCC-eEEEEECC
Confidence 468999996 8899999999999995 68888754
No 202
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=88.23 E-value=1.4 Score=44.00 Aligned_cols=109 Identities=13% Similarity=0.125 Sum_probs=59.5
Q ss_pred CcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHh---------CCCC
Q 012484 26 ASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQEL---------NDAV 95 (462)
Q Consensus 26 ~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~l---------Np~v 95 (462)
.+|+|.|+ |++|+++++.|...|. ++++++...-. ....+.+.+.+.+. .+.+
T Consensus 70 ~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~----------------~~~~~~l~~~l~~~~~~~~~~~~~~~v 132 (427)
T 4f6c_A 70 GNTLLTGATGFLGAYLIEALQGYSH-RIYCFIRADNE----------------EIAWYKLMTNLNDYFSEETVEMMLSNI 132 (427)
T ss_dssp EEEEEECTTSHHHHHHHHHHTTTEE-EEEEEEECSSH----------------HHHHHHHHHHHHHHSCHHHHHHHHTTE
T ss_pred CEEEEecCCcHHHHHHHHHHHcCCC-EEEEEECCCCh----------------HHHHHHHHHHHHHhccccccccccCce
Confidence 47999995 8899999999977765 56665422110 00112222233222 2333
Q ss_pred eEEEEecChhhhhcCCcCCCCCCcEEEEcCCCh--------------HHHHHHHHHHHHcCceEEEEeeccceEE
Q 012484 96 KAKFIEEYPEALIEMNPPFFSQFTLVVATQLGE--------------EKMIKLDRICREANVMLIFARSYGLTGF 156 (462)
Q Consensus 96 ~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~--------------~~~~~l~~~~~~~~ip~i~~~~~G~~G~ 156 (462)
.++..+..+. .....+.++|+||.+.... .....+.+.|.+....+|..++.+. |.
T Consensus 133 --~~v~~Dl~d~--~~l~~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~ 202 (427)
T 4f6c_A 133 --EVIVGDFECM--DDVVLPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GT 202 (427)
T ss_dssp --EEEEECC-----CCCCCSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GS
T ss_pred --EEEeCCCCCc--ccCCCcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CC
Confidence 3343332211 1111466899999654221 1123455677776678888888776 54
No 203
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=88.22 E-value=0.32 Score=47.34 Aligned_cols=35 Identities=17% Similarity=0.306 Sum_probs=31.5
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
..+|+|||.|..|..+|..|.+.|..+++|+|...
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC
Confidence 46899999999999999999999976799999764
No 204
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=88.17 E-value=1.2 Score=42.21 Aligned_cols=100 Identities=18% Similarity=0.134 Sum_probs=56.4
Q ss_pred cCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHh-CCCCeEEEEec
Q 012484 25 KASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQEL-NDAVKAKFIEE 102 (462)
Q Consensus 25 ~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~l-Np~v~v~~~~~ 102 (462)
..+|+|.|+ |.+|+.+++.|...|. ++++++.+.-. ....|++. +.++ .+.+++ +..
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~--------------~~~~~~~~----~~~~~~~~~~~--~~~ 62 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEVV--------------SNIDKVQM----LLYFKQLGAKL--IEA 62 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCCS--------------SCHHHHHH----HHHHHTTTCEE--ECC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCC-cEEEEECCCcc--------------cchhHHHH----HHHHHhCCeEE--EeC
Confidence 368999995 8899999999999994 67776543210 00012222 2222 344543 322
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCC------ChHHHHHHHHHHHHcC-ceEE
Q 012484 103 YPEALIEMNPPFFSQFTLVVATQL------GEEKMIKLDRICREAN-VMLI 146 (462)
Q Consensus 103 ~~~~~~~~~~~~~~~~dvVi~~~~------~~~~~~~l~~~~~~~~-ip~i 146 (462)
+..+. +.-...++++|+||.+.. +......+.+.|++.+ ++-+
T Consensus 63 D~~d~-~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~ 112 (313)
T 1qyd_A 63 SLDDH-QRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRF 112 (313)
T ss_dssp CSSCH-HHHHHHHTTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEE
T ss_pred CCCCH-HHHHHHHhCCCEEEECCccccchhhHHHHHHHHHHHHhcCCCceE
Confidence 21110 001134568999996543 2334566778888887 6533
No 205
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=88.15 E-value=2.2 Score=41.52 Aligned_cols=89 Identities=16% Similarity=0.154 Sum_probs=51.8
Q ss_pred cCcEEEEcCChhHHHHHHHHHHh--CCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEec
Q 012484 25 KASVCLLNCGPTGSETLKNLVLG--GIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 102 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~--Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~ 102 (462)
..+|.|||+|.+|...++.|... |+.-+.++|.+ ..|++.+++.. + + ....
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~-------------------~~~~~~~~~~~---~--~--~~~~- 65 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDID-------------------PAALKAAVERT---G--A--RGHA- 65 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSS-------------------HHHHHHHHHHH---C--C--EEES-
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCC-------------------HHHHHHHHHHc---C--C--ceeC-
Confidence 35899999999999999999987 44444466532 22444443332 2 2 2222
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEE
Q 012484 103 YPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLI 146 (462)
Q Consensus 103 ~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i 146 (462)
+.+++.+. .+.|+|+.|+.+. ....+...|.+.|++++
T Consensus 66 ~~~~ll~~-----~~~D~V~i~tp~~-~h~~~~~~al~~gk~v~ 103 (354)
T 3q2i_A 66 SLTDMLAQ-----TDADIVILTTPSG-LHPTQSIECSEAGFHVM 103 (354)
T ss_dssp CHHHHHHH-----CCCSEEEECSCGG-GHHHHHHHHHHTTCEEE
T ss_pred CHHHHhcC-----CCCCEEEECCCcH-HHHHHHHHHHHCCCCEE
Confidence 33333221 2578888777553 33444455666666643
No 206
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=88.10 E-value=0.41 Score=47.58 Aligned_cols=35 Identities=26% Similarity=0.357 Sum_probs=32.3
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
.+..++|+|+|+|++|..+++.+...|. +++++|.
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~ 199 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGA-TVTVLDI 199 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeC
Confidence 4788999999999999999999999999 7999884
No 207
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=88.09 E-value=1.5 Score=42.01 Aligned_cols=31 Identities=16% Similarity=0.337 Sum_probs=26.8
Q ss_pred cEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 27 SVCLLNC-GPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 27 ~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
+|+|.|+ |.+|+.+++.|...|. ++++++.+
T Consensus 15 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 46 (342)
T 2x4g_A 15 KYAVLGATGLLGHHAARAIRAAGH-DLVLIHRP 46 (342)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTC-EEEEEECT
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-EEEEEecC
Confidence 7999995 8899999999999994 78888754
No 208
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=87.97 E-value=1.2 Score=42.60 Aligned_cols=106 Identities=13% Similarity=0.161 Sum_probs=55.6
Q ss_pred HHHHHHhc-CcEEEEc-CChhHHHHHHHHHH-hCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhC-C
Q 012484 18 QGQAALEK-ASVCLLN-CGPTGSETLKNLVL-GGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELN-D 93 (462)
Q Consensus 18 ~~q~~L~~-~~VlivG-~g~lG~eiaknLvl-~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lN-p 93 (462)
++|..|.. -||+|+| +|.+|..+++.+.. .++.=+-++|...- + ....|+|. +..+. .
T Consensus 13 ~~~~~m~~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~---~------~~G~d~ge---------l~G~~~~ 74 (288)
T 3ijp_A 13 EAQTQGPGSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGS---S------FVDKDASI---------LIGSDFL 74 (288)
T ss_dssp --------CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTC---T------TTTSBGGG---------GTTCSCC
T ss_pred hhhhhccCCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc---c------ccccchHH---------hhccCcC
Confidence 44555544 5899999 89999999998874 34433334453210 0 01112331 00111 1
Q ss_pred CCeEEEEecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEEEEeeccc
Q 012484 94 AVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGL 153 (462)
Q Consensus 94 ~v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~ 153 (462)
.+. +..+.+. .+.++|+||..+.+ .........|.++|+|+|. ++.|+
T Consensus 75 gv~---v~~dl~~-------ll~~aDVvIDFT~p-~a~~~~~~~~l~~Gv~vVi-GTTG~ 122 (288)
T 3ijp_A 75 GVR---ITDDPES-------AFSNTEGILDFSQP-QASVLYANYAAQKSLIHII-GTTGF 122 (288)
T ss_dssp SCB---CBSCHHH-------HTTSCSEEEECSCH-HHHHHHHHHHHHHTCEEEE-CCCCC
T ss_pred Cce---eeCCHHH-------HhcCCCEEEEcCCH-HHHHHHHHHHHHcCCCEEE-ECCCC
Confidence 222 1122222 34579999988755 4455666789999999775 45554
No 209
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=87.94 E-value=0.47 Score=47.03 Aligned_cols=35 Identities=20% Similarity=0.349 Sum_probs=31.5
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCC-eEEEEeCCc
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIG-SITVIDGSK 59 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~-~itlvD~d~ 59 (462)
.+||+|||.|..|..+|+.|.+.|-+ +|||+|...
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNE 37 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCC
Confidence 58999999999999999999999875 899998654
No 210
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=87.93 E-value=0.47 Score=45.49 Aligned_cols=34 Identities=18% Similarity=0.409 Sum_probs=30.5
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
...|+|||.|..|..+|..|.+.|+ +++|+|...
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~-~V~vlE~~~ 35 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGH-QVHLFDKSR 35 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCC-cEEEEECCC
Confidence 3589999999999999999999998 699999653
No 211
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=87.80 E-value=0.53 Score=42.69 Aligned_cols=32 Identities=22% Similarity=0.246 Sum_probs=27.8
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
..+|+|+|+|.+|..+++.|...|. +++++|.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~-~V~~~~r 59 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGF-KVVVGSR 59 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTC-CEEEEES
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 4689999999999999999999997 5888774
No 212
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=87.78 E-value=1.1 Score=42.35 Aligned_cols=96 Identities=14% Similarity=0.213 Sum_probs=54.8
Q ss_pred cCcEEEEcC-ChhHHHHHHHHHH-hCCCeEEEEeCCcc--cccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEE
Q 012484 25 KASVCLLNC-GPTGSETLKNLVL-GGIGSITVIDGSKV--EVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFI 100 (462)
Q Consensus 25 ~~~VlivG~-g~lG~eiaknLvl-~Gv~~itlvD~d~v--~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~ 100 (462)
+-+|+|+|+ |.+|..+++.+.. .|+.=+-++|.+.- ...|++.. .|..+ ..+.+ .
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~-------~g~~~------------~~v~~--~ 63 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGEL-------AGAGK------------TGVTV--Q 63 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCS-------SSSSC------------CSCCE--E
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHH-------cCCCc------------CCcee--c
Confidence 358999999 9999999999874 45322225564321 11122111 01000 01221 1
Q ss_pred ecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEEEEee
Q 012484 101 EEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARS 150 (462)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~ 150 (462)
.+ -.+.+.+.|+||..+.+ .....+...|.++|++++...+
T Consensus 64 -~d-------l~~~l~~~DvVIDft~p-~~~~~~~~~a~~~G~~vVigTt 104 (273)
T 1dih_A 64 -SS-------LDAVKDDFDVFIDFTRP-EGTLNHLAFCRQHGKGMVIGTT 104 (273)
T ss_dssp -SC-------STTTTTSCSEEEECSCH-HHHHHHHHHHHHTTCEEEECCC
T ss_pred -CC-------HHHHhcCCCEEEEcCCh-HHHHHHHHHHHhCCCCEEEECC
Confidence 11 12345678999977754 4556777899999999665443
No 213
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=87.76 E-value=0.37 Score=47.84 Aligned_cols=38 Identities=26% Similarity=0.451 Sum_probs=32.6
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 21 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 21 ~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
..+...+|+|||+|..|..+|..|.+.|+ +++|+|...
T Consensus 22 ~~~~~~dV~IVGaG~aGl~~A~~L~~~G~-~v~v~E~~~ 59 (398)
T 2xdo_A 22 NLLSDKNVAIIGGGPVGLTMAKLLQQNGI-DVSVYERDN 59 (398)
T ss_dssp -CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEECSS
T ss_pred cccCCCCEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence 34556799999999999999999999998 799999753
No 214
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=87.69 E-value=1.3 Score=45.02 Aligned_cols=36 Identities=28% Similarity=0.356 Sum_probs=31.3
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
+++++|+|+|.|+.|..+|+.|...|. +++..|...
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~~G~-~V~~~D~~~ 42 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAKLGA-IVTVNDGKP 42 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHHTTC-EEEEEESSC
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEeCCc
Confidence 567899999999999999999999995 588888543
No 215
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=87.63 E-value=0.49 Score=45.09 Aligned_cols=31 Identities=29% Similarity=0.403 Sum_probs=27.9
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
.+|+|||+|.+|+.++..|...|. +++++|.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r 34 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQ 34 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEEC
Confidence 479999999999999999999996 7888874
No 216
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=87.59 E-value=1.8 Score=41.62 Aligned_cols=31 Identities=23% Similarity=0.302 Sum_probs=27.2
Q ss_pred cEEEEcC-ChhHHHHHHHHHHhCC-CeEEEEeC
Q 012484 27 SVCLLNC-GPTGSETLKNLVLGGI-GSITVIDG 57 (462)
Q Consensus 27 ~VlivG~-g~lG~eiaknLvl~Gv-~~itlvD~ 57 (462)
+|+|+|+ |.+|+.++..|+..|. ..+.|+|.
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di 34 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGR 34 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEEC
T ss_pred EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcC
Confidence 7999998 9999999999998886 45888883
No 217
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=87.59 E-value=1.5 Score=42.09 Aligned_cols=32 Identities=25% Similarity=0.427 Sum_probs=26.6
Q ss_pred cCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 25 KASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 25 ~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
+.+|+|.| .|++|..+++.|...|. +++++|.
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGY-DVVIADN 37 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEec
Confidence 46899998 58899999999999996 4777764
No 218
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=87.57 E-value=0.81 Score=42.86 Aligned_cols=52 Identities=13% Similarity=0.215 Sum_probs=39.3
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCC
Q 012484 22 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELND 93 (462)
Q Consensus 22 ~L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp 93 (462)
.|+++.++|-| .+|+|.++|+.|+..|. ++.++|.+ ..+++.+++.+.+...
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~-------------------~~~~~~~~~~i~~~g~ 56 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELL-------------------EDRLNQIVQELRGMGK 56 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECC-------------------HHHHHHHHHHHHhcCC
Confidence 47888888887 58899999999999998 47777732 2356666677766654
No 219
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=87.52 E-value=0.52 Score=45.54 Aligned_cols=32 Identities=22% Similarity=0.267 Sum_probs=28.9
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.+|+|+|+|++|+.++..|...|. .++++|.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH-CVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC-EEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 589999999999999999999995 78998754
No 220
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=87.50 E-value=0.51 Score=45.25 Aligned_cols=32 Identities=13% Similarity=0.192 Sum_probs=28.4
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
..++|.|||+|.+|+.+|.+|+ +|. .++++|.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~-~V~v~d~ 42 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKH-EVVLQDV 42 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTS-EEEEECS
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCC-EEEEEEC
Confidence 4689999999999999999999 998 6999883
No 221
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=87.49 E-value=0.54 Score=46.86 Aligned_cols=36 Identities=25% Similarity=0.410 Sum_probs=31.6
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
...+|+|||.|..|..+|..|.+.|+.+++|+|...
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~ 38 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSS 38 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 356899999999999999999999997699999654
No 222
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=87.49 E-value=0.9 Score=43.48 Aligned_cols=32 Identities=19% Similarity=0.234 Sum_probs=21.8
Q ss_pred hcCcEEEEcCChh--HHHHHHHHHHhCCCeEEEEeCC
Q 012484 24 EKASVCLLNCGPT--GSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 24 ~~~~VlivG~g~l--G~eiaknLvl~Gv~~itlvD~d 58 (462)
...+||++|||+- ..++++ ..++.+++.+|-|
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~---~~~~~~V~~VDid 116 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTR---HKNVESITMVEID 116 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHT---CTTCCEEEEECSC
T ss_pred CCCEEEEEeCChhHHHHHHHh---CCCCCEEEEEECC
Confidence 3579999998743 333333 3578999999843
No 223
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=87.45 E-value=0.5 Score=45.76 Aligned_cols=35 Identities=17% Similarity=0.255 Sum_probs=29.1
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCC---CeEEEEeC
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGI---GSITVIDG 57 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv---~~itlvD~ 57 (462)
+...+|.|||+|.+|+.++.+|...|+ ..++++|.
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r 57 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSP 57 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECC
Confidence 334589999999999999999999995 67888863
No 224
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=87.45 E-value=0.48 Score=46.76 Aligned_cols=34 Identities=26% Similarity=0.347 Sum_probs=31.4
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
+...+|+|+|+|++|..++..+...|. +++++|.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr 198 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDI 198 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeC
Confidence 667899999999999999999999999 8999974
No 225
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=87.41 E-value=2.5 Score=42.93 Aligned_cols=94 Identities=14% Similarity=0.148 Sum_probs=55.1
Q ss_pred cCcEEEEcCChh-HHHHHHHHHH--hCC--CeEEEEeCCcccccCCCcccccccccccccHHHHHH---HH-HHHhCCCC
Q 012484 25 KASVCLLNCGPT-GSETLKNLVL--GGI--GSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVC---AF-LQELNDAV 95 (462)
Q Consensus 25 ~~~VlivG~g~l-G~eiaknLvl--~Gv--~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~---~~-l~~lNp~v 95 (462)
..+|.|||+|++ |..++..|+. .+. ..++|+|-+. |+.|++.+. .. +...+...
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~-----------------~~e~~~~~~~~~~~~~~~~~~~~ 69 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPE-----------------GKEKLEIVGALAKRMVEKAGVPI 69 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGG-----------------GHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCC-----------------ChHHHHHHHHHHHHHHhhcCCCc
Confidence 458999999999 8888888887 565 6799998322 223444422 22 23445556
Q ss_pred eEEEEecChhhhhcCCcCCCCCCcEEEEcCCChH--HHHHHHHHHHHcCc
Q 012484 96 KAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEE--KMIKLDRICREANV 143 (462)
Q Consensus 96 ~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~--~~~~l~~~~~~~~i 143 (462)
+++... +. .+-++++|+||.+..... .+.+...+..++|+
T Consensus 70 ~i~~t~-D~-------~eal~gAD~VVitagv~~~~~~~rd~~ip~~~g~ 111 (450)
T 1s6y_A 70 EIHLTL-DR-------RRALDGADFVTTQFRVGGLEARAKDERIPLKYGV 111 (450)
T ss_dssp EEEEES-CH-------HHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTC
T ss_pred EEEEeC-CH-------HHHhCCCCEEEEcCCCCCCcchhhhhhhhhhcCc
Confidence 665432 11 123568999998765422 23333334444444
No 226
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=87.36 E-value=2.8 Score=40.63 Aligned_cols=88 Identities=11% Similarity=0.167 Sum_probs=51.0
Q ss_pred CcEEEEcCChhHHHHHHHHHHh-CCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecCh
Q 012484 26 ASVCLLNCGPTGSETLKNLVLG-GIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYP 104 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~-Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~~ 104 (462)
.+|.|||+|.+|...+++|... |+.-+.++|.+ ..|++.+++ +.+ +. .. .+.
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~-------------------~~~~~~~a~---~~g--~~--~~-~~~ 57 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPF-------------------IEGAQRLAE---ANG--AE--AV-ASP 57 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSS-------------------HHHHHHHHH---TTT--CE--EE-SSH
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCC-------------------HHHHHHHHH---HcC--Cc--ee-CCH
Confidence 4899999999999999999875 43333355522 123333222 222 22 22 233
Q ss_pred hhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEE
Q 012484 105 EALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLI 146 (462)
Q Consensus 105 ~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i 146 (462)
.++.+. .+.|+|+.++.+ .....+...|.+.|++++
T Consensus 58 ~~~l~~-----~~~D~V~i~tp~-~~h~~~~~~al~~gk~v~ 93 (344)
T 3euw_A 58 DEVFAR-----DDIDGIVIGSPT-STHVDLITRAVERGIPAL 93 (344)
T ss_dssp HHHTTC-----SCCCEEEECSCG-GGHHHHHHHHHHTTCCEE
T ss_pred HHHhcC-----CCCCEEEEeCCc-hhhHHHHHHHHHcCCcEE
Confidence 333221 267899888755 344455556777777644
No 227
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=87.29 E-value=1 Score=42.87 Aligned_cols=102 Identities=12% Similarity=0.031 Sum_probs=56.4
Q ss_pred cCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecC
Q 012484 25 KASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY 103 (462)
Q Consensus 25 ~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~ 103 (462)
..+|+|.|+ |.+|+.+++.|...| .++++++.+.-+. . ...+++.+. .+. .+.+++ +..+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~-----~--------~~~~~~~l~-~~~--~~~v~~--v~~D 64 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFS-HPTFIYARPLTPD-----S--------TPSSVQLRE-EFR--SMGVTI--IEGE 64 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTT-CCEEEEECCCCTT-----C--------CHHHHHHHH-HHH--HTTCEE--EECC
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCC-CcEEEEECCcccc-----c--------ChHHHHHHH-Hhh--cCCcEE--EEec
Confidence 357999995 889999999999999 4677776432000 0 001222221 122 234543 3222
Q ss_pred hhhhhcCCcCCCCCCcEEEEcCCCh--HHHHHHHHHHHHcC-ceEE
Q 012484 104 PEALIEMNPPFFSQFTLVVATQLGE--EKMIKLDRICREAN-VMLI 146 (462)
Q Consensus 104 ~~~~~~~~~~~~~~~dvVi~~~~~~--~~~~~l~~~~~~~~-ip~i 146 (462)
..+. +.-...++++|+||.+.... .....+.+.|++.+ ++-+
T Consensus 65 ~~d~-~~l~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~ 109 (321)
T 3c1o_A 65 MEEH-EKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIKRF 109 (321)
T ss_dssp TTCH-HHHHHHHTTCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEE
T ss_pred CCCH-HHHHHHHcCCCEEEECCCccchhhHHHHHHHHHHhCCccEE
Confidence 2111 00123456899999765432 33456677888877 6544
No 228
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=87.28 E-value=0.51 Score=45.46 Aligned_cols=32 Identities=13% Similarity=0.117 Sum_probs=28.2
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.+|+|+|+|++|+.++..|...|. .+++++.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE-DVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC-CEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-eEEEEEcC
Confidence 589999999999999999999996 68888754
No 229
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=87.26 E-value=0.57 Score=46.97 Aligned_cols=36 Identities=28% Similarity=0.404 Sum_probs=32.7
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcc
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKV 60 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v 60 (462)
...|+|||.|..|..+|..|++.|..+++|+|....
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPV 41 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 468999999999999999999999978999997765
No 230
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=87.22 E-value=1.9 Score=41.17 Aligned_cols=35 Identities=9% Similarity=0.137 Sum_probs=25.7
Q ss_pred HhcCcEEEEcCChhHHH-HHHHHHH-hCCCeEEEEeC
Q 012484 23 LEKASVCLLNCGPTGSE-TLKNLVL-GGIGSITVIDG 57 (462)
Q Consensus 23 L~~~~VlivG~g~lG~e-iaknLvl-~Gv~~itlvD~ 57 (462)
|+..+|.|||+|.+|.. .++.|.. .|+.-+.++|.
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~ 40 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTP 40 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECS
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECC
Confidence 45679999999999996 8888876 45444446663
No 231
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=87.18 E-value=0.55 Score=45.76 Aligned_cols=33 Identities=24% Similarity=0.262 Sum_probs=28.9
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..+|+|||+|.+|+.++..|...|. .++++|.+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~-~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 3689999999999999999999996 58888743
No 232
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=87.17 E-value=0.55 Score=46.64 Aligned_cols=39 Identities=18% Similarity=0.175 Sum_probs=31.3
Q ss_pred HHHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 20 QAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 20 q~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
.+..+..+|+|||+|..|..+|..|.+.|+ +++|+|.+.
T Consensus 18 ~~~~~~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~E~~~ 56 (407)
T 3rp8_A 18 LYFQGHMKAIVIGAGIGGLSAAVALKQSGI-DCDVYEAVK 56 (407)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred ccCCCCCEEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 345567899999999999999999999998 699999764
No 233
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=87.12 E-value=0.52 Score=44.31 Aligned_cols=37 Identities=16% Similarity=0.162 Sum_probs=30.9
Q ss_pred HHHhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 21 AALEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 21 ~~L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..|++++|+|.|+ ||+|.++++.|+..|.. +.++|..
T Consensus 6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~~~ 43 (287)
T 3pxx_A 6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGAD-IILFDIC 43 (287)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECC
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCe-EEEEccc
Confidence 3577889999984 78999999999999974 8888754
No 234
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=87.11 E-value=0.53 Score=46.60 Aligned_cols=35 Identities=26% Similarity=0.289 Sum_probs=31.3
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
.|..++|+|+|+|.+|..+|+.|...|. ++++.|.
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~ 204 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDV 204 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcC
Confidence 3778999999999999999999999998 4778873
No 235
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=87.03 E-value=0.57 Score=43.57 Aligned_cols=31 Identities=23% Similarity=0.225 Sum_probs=27.4
Q ss_pred cEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 27 SVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 27 ~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
+|.|||+|.+|+.++.+|...|...++++|.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r 32 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANR 32 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECS
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECC
Confidence 6999999999999999999999656888763
No 236
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=86.98 E-value=3.9 Score=39.62 Aligned_cols=90 Identities=14% Similarity=0.195 Sum_probs=50.3
Q ss_pred CcEEEEcCChhHHHHHHHHH-H-hCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecC
Q 012484 26 ASVCLLNCGPTGSETLKNLV-L-GGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY 103 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLv-l-~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~ 103 (462)
.+|.|||+|.+|...+++|. . .|+.-+.++|.+ ..|++.+++ +.+..+. ... +
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~-------------------~~~~~~~~~---~~g~~~~--~~~-~ 57 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVN-------------------QEAAQKVVE---QYQLNAT--VYP-N 57 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSS-------------------HHHHHHHHH---HTTCCCE--EES-S
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCC-------------------HHHHHHHHH---HhCCCCe--eeC-C
Confidence 47999999999999999998 4 454433455532 123333322 2221122 222 3
Q ss_pred hhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEE
Q 012484 104 PEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLI 146 (462)
Q Consensus 104 ~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i 146 (462)
.+++.+. .+.|+|+.++.+ .....+...|.+.|++++
T Consensus 58 ~~~ll~~-----~~~D~V~i~tp~-~~h~~~~~~al~~Gk~vl 94 (344)
T 3mz0_A 58 DDSLLAD-----ENVDAVLVTSWG-PAHESSVLKAIKAQKYVF 94 (344)
T ss_dssp HHHHHHC-----TTCCEEEECSCG-GGHHHHHHHHHHTTCEEE
T ss_pred HHHHhcC-----CCCCEEEECCCc-hhHHHHHHHHHHCCCcEE
Confidence 3333321 147888877744 444455556667776644
No 237
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=86.98 E-value=0.6 Score=45.52 Aligned_cols=35 Identities=20% Similarity=0.266 Sum_probs=31.3
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcc
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKV 60 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v 60 (462)
...|+|||.|.+|+.+|..|++.|. +++|+|...+
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~-~V~vle~~~~ 40 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGY-SVHILARDLP 40 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSCT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC-EEEEEeccCC
Confidence 4689999999999999999999997 7999997654
No 238
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=86.89 E-value=0.47 Score=45.25 Aligned_cols=32 Identities=22% Similarity=0.214 Sum_probs=29.2
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.+|+|+|+|++|+.++..|...|. .++++|.+
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~-~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLP-HTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCT-TCEEEESS
T ss_pred cEEEEECCCHHHHHHHHHHHHCCC-eEEEEEec
Confidence 589999999999999999999995 79999865
No 239
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=86.85 E-value=0.64 Score=43.54 Aligned_cols=104 Identities=12% Similarity=0.052 Sum_probs=56.4
Q ss_pred cEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecChh
Q 012484 27 SVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYPE 105 (462)
Q Consensus 27 ~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~~~ 105 (462)
+|+|.|+ |.+|+.+++.|...|. +++.++... .|+.. .+.+.+.+.+..+++-++.-.....
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~--------------~D~~d--~~~~~~~~~~~~~d~vi~~a~~~~~ 69 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEY-DIYPFDKKL--------------LDITN--ISQVQQVVQEIRPHIIIHCAAYTKV 69 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTE-EEEEECTTT--------------SCTTC--HHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEecccc--------------cCCCC--HHHHHHHHHhcCCCEEEECCcccCh
Confidence 7999995 8899999999999985 688887521 22221 2334445554444433221110000
Q ss_pred hhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEEEEeeccceE
Q 012484 106 ALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGLTG 155 (462)
Q Consensus 106 ~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~~G 155 (462)
..... ..+-.+ ..+......+.+.|++.++.+|..++.+.+|
T Consensus 70 ~~~~~------~~~~~~--~~n~~~~~~l~~~~~~~~~~~v~~SS~~vy~ 111 (287)
T 3sc6_A 70 DQAEK------ERDLAY--VINAIGARNVAVASQLVGAKLVYISTDYVFQ 111 (287)
T ss_dssp HHHTT------CHHHHH--HHHTHHHHHHHHHHHHHTCEEEEEEEGGGSC
T ss_pred HHHhc------CHHHHH--HHHHHHHHHHHHHHHHcCCeEEEEchhhhcC
Confidence 00000 000000 0011123456678888888899988877665
No 240
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=86.85 E-value=0.4 Score=47.13 Aligned_cols=35 Identities=23% Similarity=0.337 Sum_probs=31.5
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
....|+|||.|..|..+|..|++.|+ +++|+|.+.
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~-~V~l~E~~~ 37 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGL-KTLMIEKRP 37 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence 35689999999999999999999998 699999765
No 241
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=86.81 E-value=0.63 Score=42.89 Aligned_cols=35 Identities=20% Similarity=0.224 Sum_probs=29.4
Q ss_pred HHhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 22 ALEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 22 ~L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
.+++++|+|.|+ ||+|.++++.|+..|.. +.++|.
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~G~~-V~~~~r 41 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALAREGAA-VVVADI 41 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEcC
Confidence 467788999985 88999999999999975 777763
No 242
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=86.78 E-value=2.7 Score=39.81 Aligned_cols=33 Identities=24% Similarity=0.222 Sum_probs=26.3
Q ss_pred hcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 24 EKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 24 ~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
...+|+|.|+ |.+|+.+++.|...|. ++++++.
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~v~~~~r 35 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGD-VELVLRT 35 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTT-EEEECCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEec
Confidence 3468999995 8899999999999986 4666653
No 243
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=86.76 E-value=2.8 Score=40.26 Aligned_cols=32 Identities=13% Similarity=0.145 Sum_probs=25.5
Q ss_pred cEEEEcCChhHHHH-HHHHHHhCCCeEEEEeCC
Q 012484 27 SVCLLNCGPTGSET-LKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 27 ~VlivG~g~lG~ei-aknLvl~Gv~~itlvD~d 58 (462)
+|.|||+|.+|... ++.|...|+.-+.++|.+
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~ 34 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTS 34 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSC
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCC
Confidence 69999999999998 888888776555577643
No 244
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=86.73 E-value=0.49 Score=46.23 Aligned_cols=37 Identities=19% Similarity=0.268 Sum_probs=32.4
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 21 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 21 ~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..|..++|.|||+|.+|..+|+.|...|. +++.+|..
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~~G~-~V~~~d~~ 178 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIPFGV-KLYYWSRH 178 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSS
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCC
Confidence 36889999999999999999999999996 68888743
No 245
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=86.70 E-value=1.3 Score=41.50 Aligned_cols=36 Identities=17% Similarity=0.207 Sum_probs=30.5
Q ss_pred HHhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 22 ALEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 22 ~L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.|.++.|+|.|. ||+|.++++.|+..|. ++.++|..
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~ 44 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIA 44 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEecc
Confidence 577888999984 7899999999999998 57888753
No 246
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=86.69 E-value=0.65 Score=45.33 Aligned_cols=37 Identities=14% Similarity=0.104 Sum_probs=32.2
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 21 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 21 ~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..|..++|.|||+|.+|..+|+.|...|. +++.+|..
T Consensus 142 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~ 178 (333)
T 1j4a_A 142 REVRDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIF 178 (333)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred ccCCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCC
Confidence 35889999999999999999999999997 57787743
No 247
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=86.67 E-value=0.56 Score=46.40 Aligned_cols=35 Identities=29% Similarity=0.401 Sum_probs=31.8
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
.+...+|+|+|+|++|..+++.+...|. +++++|.
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~ 197 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGMGA-QVTILDV 197 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 3678999999999999999999999999 7999873
No 248
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=86.66 E-value=3 Score=42.71 Aligned_cols=93 Identities=15% Similarity=0.171 Sum_probs=55.3
Q ss_pred hcCcEEEEcCChh-HHHHHHHHHHh--CC--CeEEEEeCCcccccCCCcccccccccccccHHHHHH----HHHHHhCCC
Q 012484 24 EKASVCLLNCGPT-GSETLKNLVLG--GI--GSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVC----AFLQELNDA 94 (462)
Q Consensus 24 ~~~~VlivG~g~l-G~eiaknLvl~--Gv--~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~----~~l~~lNp~ 94 (462)
++.+|.|||+|++ |..++..|+.. +. ..++|+|-+. .|++.+. ..+...+..
T Consensus 27 ~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~-------------------e~~~~~~~~~~~~l~~~~~~ 87 (472)
T 1u8x_X 27 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDK-------------------ERQDRIAGACDVFIREKAPD 87 (472)
T ss_dssp CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCH-------------------HHHHHHHHHHHHHHHHHCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCH-------------------HHHHHHHHHHHHHhccCCCC
Confidence 3469999999998 67788888887 66 5699998432 1222222 222345555
Q ss_pred CeEEEEecChhhhhcCCcCCCCCCcEEEEcCCChH--HHHHHHHHHHHcCc
Q 012484 95 VKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEE--KMIKLDRICREANV 143 (462)
Q Consensus 95 v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~--~~~~l~~~~~~~~i 143 (462)
.++.... +. .+-++++|+||.+..... .+.+-..+..++|+
T Consensus 88 ~~I~~t~-D~-------~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g~ 130 (472)
T 1u8x_X 88 IEFAATT-DP-------EEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGV 130 (472)
T ss_dssp SEEEEES-CH-------HHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTC
T ss_pred CEEEEEC-CH-------HHHHcCCCEEEEcCCCccccccchhhhhhhhcCc
Confidence 6665432 11 123568999998775432 23343445555554
No 249
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=86.64 E-value=0.99 Score=41.35 Aligned_cols=33 Identities=15% Similarity=0.151 Sum_probs=27.4
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEe
Q 012484 23 LEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 56 (462)
Q Consensus 23 L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD 56 (462)
|++++|+|.| .||+|.++++.|+..|. ++.++|
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~ 36 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGA-TVVGTA 36 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEe
Confidence 5667888888 58899999999999997 477766
No 250
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=86.43 E-value=3 Score=40.10 Aligned_cols=32 Identities=22% Similarity=0.238 Sum_probs=24.9
Q ss_pred CcEEEEcCChhHHHHHHHHHHh-CCCeEEEEeC
Q 012484 26 ASVCLLNCGPTGSETLKNLVLG-GIGSITVIDG 57 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~-Gv~~itlvD~ 57 (462)
.+|.|||+|.+|...++.|... |+.-+.++|.
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~ 36 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADA 36 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECC
Confidence 5899999999999999999875 5443345653
No 251
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=86.42 E-value=0.42 Score=44.53 Aligned_cols=37 Identities=11% Similarity=0.114 Sum_probs=29.8
Q ss_pred HHHHhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 20 QAALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 20 q~~L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
+..+.+++|+|.| .||+|.++++.|+..|.. +.++|.
T Consensus 24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~-V~~~~r 61 (262)
T 3rkr_A 24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGAR-VVLTAR 61 (262)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred hhccCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEEC
Confidence 3457778899998 588999999999999975 777763
No 252
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=86.37 E-value=0.62 Score=45.04 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=32.8
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
.|.+++|.|||+|.+|..+|+.|...|. +++.+|...
T Consensus 141 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~ 177 (311)
T 2cuk_A 141 DLQGLTLGLVGMGRIGQAVAKRALAFGM-RVVYHARTP 177 (311)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHCCC-EEEEECCCC
Confidence 5888999999999999999999999996 688888644
No 253
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=86.34 E-value=4.3 Score=41.53 Aligned_cols=93 Identities=12% Similarity=0.214 Sum_probs=53.3
Q ss_pred hcCcEEEEcCChh--HHHHHHHHHHh-C--CCeEEEEeCCcccccCCCcccccccccccccHHHHHHH----HHHHhCCC
Q 012484 24 EKASVCLLNCGPT--GSETLKNLVLG-G--IGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCA----FLQELNDA 94 (462)
Q Consensus 24 ~~~~VlivG~g~l--G~eiaknLvl~-G--v~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~----~l~~lNp~ 94 (462)
+..+|.|||+|++ |+.++..|+.. + ...++|+|-+. .|++.+.. .+......
T Consensus 2 ~~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~-------------------e~l~~~~~~~~~~l~~~~~~ 62 (480)
T 1obb_A 2 PSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDE-------------------ERLDAILTIAKKYVEEVGAD 62 (480)
T ss_dssp CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCH-------------------HHHHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCH-------------------HHHHHHHHHHHHHhccCCCC
Confidence 3568999999996 57778888743 3 46899998432 23332222 22233444
Q ss_pred CeEEEEecChhhhhcCCcCCCCCCcEEEEcCCChHH--HHHHHHHHHHcCc
Q 012484 95 VKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEK--MIKLDRICREANV 143 (462)
Q Consensus 95 v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~--~~~l~~~~~~~~i 143 (462)
.+++... +. .+-++++|+||.+...... +..-.++..+.++
T Consensus 63 ~~I~~tt-D~-------~eal~dAD~VIiaagv~~~~~~~~dE~ip~K~g~ 105 (480)
T 1obb_A 63 LKFEKTM-NL-------DDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGY 105 (480)
T ss_dssp CEEEEES-CH-------HHHHTTCSEEEECCCTTHHHHHHHHHHHHHHTTC
T ss_pred cEEEEEC-CH-------HHHhCCCCEEEECCCccccccccccccccccccc
Confidence 5555432 11 1235689999988754332 3333445566554
No 254
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=86.26 E-value=0.62 Score=45.49 Aligned_cols=36 Identities=11% Similarity=0.096 Sum_probs=31.8
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.|..++|.|||+|.+|..+|+.|...|. +++.+|..
T Consensus 147 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~ 182 (334)
T 2dbq_A 147 DVYGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRT 182 (334)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCC
Confidence 5788999999999999999999999996 68888743
No 255
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=86.24 E-value=0.69 Score=45.28 Aligned_cols=35 Identities=23% Similarity=0.364 Sum_probs=31.4
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcc
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKV 60 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v 60 (462)
...|+|||.|..|+.+|..|++.|.. ++|+|...+
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G~~-V~lle~~~~ 39 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRGEE-VTVIEKRFI 39 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCC-EEEECSSST
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCe-EEEEeCCCC
Confidence 46899999999999999999999985 999997654
No 256
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=86.20 E-value=0.56 Score=45.83 Aligned_cols=36 Identities=14% Similarity=0.122 Sum_probs=32.0
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.|..++|.|||+|.+|..+|+.|...|. +++++|..
T Consensus 161 ~l~g~~vgIIG~G~iG~~vA~~l~~~G~-~V~~~dr~ 196 (333)
T 3ba1_A 161 KFSGKRVGIIGLGRIGLAVAERAEAFDC-PISYFSRS 196 (333)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTC-CEEEECSS
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCC
Confidence 5888999999999999999999999997 58888754
No 257
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=86.16 E-value=2.6 Score=41.06 Aligned_cols=86 Identities=20% Similarity=0.147 Sum_probs=52.2
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhC---------CCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGG---------IGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAV 95 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~G---------v~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v 95 (462)
.-+|.|+|+|.+|+.+++.|.... +.=..+.|.+.... + .++ . .
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~----~-------~~~---------------~-~ 55 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKP----R-------AIP---------------Q-E 55 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSC----C-------SSC---------------G-G
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHh----h-------ccC---------------c-c
Confidence 358999999999999999987753 33334455432110 0 010 0 0
Q ss_pred eEEEEecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEEEE
Q 012484 96 KAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFA 148 (462)
Q Consensus 96 ~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~ 148 (462)
. . ..+-.+++ +.|+|+.|+.+..........|.++|+.++.+
T Consensus 56 ~---~-------~~d~~~ll-~iDvVve~t~~~~~a~~~~~~AL~aGKhVVta 97 (332)
T 2ejw_A 56 L---L-------RAEPFDLL-EADLVVEAMGGVEAPLRLVLPALEAGIPLITA 97 (332)
T ss_dssp G---E-------ESSCCCCT-TCSEEEECCCCSHHHHHHHHHHHHTTCCEEEC
T ss_pred c---c-------cCCHHHHh-CCCEEEECCCCcHHHHHHHHHHHHcCCeEEEC
Confidence 0 1 11123345 88999988876544455666788889987764
No 258
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=86.14 E-value=0.62 Score=47.81 Aligned_cols=35 Identities=14% Similarity=0.203 Sum_probs=31.6
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
|.+++|+|+|+|++|..+|+.|...|. ++.++|.+
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~ 297 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEID 297 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 678999999999999999999999998 78888743
No 259
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=86.12 E-value=0.55 Score=45.78 Aligned_cols=36 Identities=19% Similarity=0.326 Sum_probs=32.2
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.|..++|.|||+|.+|..+|+.|...|. +++.+|..
T Consensus 152 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~ 187 (330)
T 2gcg_A 152 GLTQSTVGIIGLGRIGQAIARRLKPFGV-QRFLYTGR 187 (330)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGTC-CEEEEESS
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCC
Confidence 5888999999999999999999999997 58888853
No 260
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=86.09 E-value=1.4 Score=43.01 Aligned_cols=33 Identities=27% Similarity=0.259 Sum_probs=29.1
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
..+|+|+|+|++|..++.-+...|.++++.+|.
T Consensus 172 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 204 (356)
T 1pl8_A 172 GHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDL 204 (356)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 468999999999999998888899988888873
No 261
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=86.04 E-value=1.8 Score=41.10 Aligned_cols=97 Identities=12% Similarity=0.092 Sum_probs=55.0
Q ss_pred CcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecCh
Q 012484 26 ASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYP 104 (462)
Q Consensus 26 ~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~~ 104 (462)
++|+|.|+ |.+|..+++.|...|. ++++++.+.- .+++.+ ..+.. +.+++ +..+.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~------------------~~~~~~-~~l~~--~~v~~--v~~Dl 67 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGH-PTYVFTRPNS------------------SKTTLL-DEFQS--LGAII--VKGEL 67 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTC-CEEEEECTTC------------------SCHHHH-HHHHH--TTCEE--EECCT
T ss_pred CeEEEECCCchHHHHHHHHHHHCCC-cEEEEECCCC------------------chhhHH-HHhhc--CCCEE--EEecC
Confidence 58999996 8899999999999994 5777653220 112111 11222 34443 32222
Q ss_pred hhhhcCCcCCCCCCcEEEEcCCC--hHHHHHHHHHHHHcC-ceEEE
Q 012484 105 EALIEMNPPFFSQFTLVVATQLG--EEKMIKLDRICREAN-VMLIF 147 (462)
Q Consensus 105 ~~~~~~~~~~~~~~dvVi~~~~~--~~~~~~l~~~~~~~~-ip~i~ 147 (462)
.+. +.-...++++|+||.+... ......+.+.|++.+ ++.+.
T Consensus 68 ~d~-~~l~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 112 (318)
T 2r6j_A 68 DEH-EKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFL 112 (318)
T ss_dssp TCH-HHHHHHHTTCSEEEECCCGGGSTTHHHHHHHHHHHCCCCEEE
T ss_pred CCH-HHHHHHHcCCCEEEECCchhhhHHHHHHHHHHHhcCCCCEEE
Confidence 110 0011345678999976543 223456677888877 65443
No 262
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=86.03 E-value=1.6 Score=40.19 Aligned_cols=53 Identities=15% Similarity=0.163 Sum_probs=38.4
Q ss_pred HHhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCC
Q 012484 22 ALEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDA 94 (462)
Q Consensus 22 ~L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~ 94 (462)
.++++.++|.|+ ||+|.++++.|+..|. ++.++|.+ ..+.+.+.+.+.+.++.
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~~~ 57 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARS-------------------KQNLEKVHDEIMRSNKH 57 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESC-------------------HHHHHHHHHHHHHHCTT
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECC-------------------HHHHHHHHHHHHHhccc
Confidence 356778888884 8999999999999998 67777632 23555666667666543
No 263
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=86.01 E-value=1.1 Score=44.16 Aligned_cols=32 Identities=22% Similarity=0.307 Sum_probs=29.2
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEe
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVID 56 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD 56 (462)
..+|+|+|+|++|..++.-+...|..+++.+|
T Consensus 183 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~ 214 (370)
T 4ej6_A 183 GSTVAILGGGVIGLLTVQLARLAGATTVILST 214 (370)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEC
Confidence 57899999999999999999999999898886
No 264
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=85.93 E-value=1.1 Score=42.37 Aligned_cols=33 Identities=15% Similarity=0.326 Sum_probs=22.4
Q ss_pred hcCcEEEEcCChhHHHHHHHHHH-hCCCeEEEEeCC
Q 012484 24 EKASVCLLNCGPTGSETLKNLVL-GGIGSITVIDGS 58 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl-~Gv~~itlvD~d 58 (462)
...+|+++|+|+ |.- +..+++ .|+.+++.+|-|
T Consensus 75 ~~~~VLdiG~G~-G~~-~~~l~~~~~~~~v~~vEid 108 (275)
T 1iy9_A 75 NPEHVLVVGGGD-GGV-IREILKHPSVKKATLVDID 108 (275)
T ss_dssp SCCEEEEESCTT-CHH-HHHHTTCTTCSEEEEEESC
T ss_pred CCCEEEEECCch-HHH-HHHHHhCCCCceEEEEECC
Confidence 467899999874 322 333333 489999999844
No 265
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=85.88 E-value=1.8 Score=41.94 Aligned_cols=32 Identities=16% Similarity=0.317 Sum_probs=24.5
Q ss_pred cCcEEEEcCChhHHHHHHHHH-H-hCCCeEEEEe
Q 012484 25 KASVCLLNCGPTGSETLKNLV-L-GGIGSITVID 56 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLv-l-~Gv~~itlvD 56 (462)
..+|.|||+|.+|...++.|. . .|+.-+.++|
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d 41 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACA 41 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEEC
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEec
Confidence 358999999999999999987 4 4554345555
No 266
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=85.83 E-value=0.67 Score=45.31 Aligned_cols=35 Identities=11% Similarity=0.164 Sum_probs=31.3
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcc
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKV 60 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v 60 (462)
...|+|||.|..|..+|..|++.|. +++|+|...+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G~-~V~llE~~~~ 51 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKENK-NTALFESGTM 51 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCC-cEEEEeCCCC
Confidence 4689999999999999999999998 6999997654
No 267
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=85.73 E-value=0.64 Score=46.67 Aligned_cols=36 Identities=17% Similarity=0.224 Sum_probs=32.1
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
+...+|+|+|+|++|..+++.+...|. +++++|...
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~ 205 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRP 205 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCH
Confidence 457899999999999999999999998 799998543
No 268
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=85.73 E-value=3.9 Score=39.36 Aligned_cols=36 Identities=11% Similarity=0.154 Sum_probs=26.6
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhC-CCeEEEEeCCc
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGG-IGSITVIDGSK 59 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~G-v~~itlvD~d~ 59 (462)
+..+|.|||+|.+|...++.|...+ +.-+.++|.+.
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~ 40 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTL 40 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCS
T ss_pred CceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCH
Confidence 4468999999999999999998764 33334666544
No 269
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=85.70 E-value=0.52 Score=45.31 Aligned_cols=34 Identities=21% Similarity=0.352 Sum_probs=30.4
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
...+|+|||.|..|..+|..|.+.|. +++|+|..
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~-~v~vie~~ 35 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGL-SYVILDAE 35 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSC-CEEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECC
Confidence 34689999999999999999999998 59999865
No 270
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=85.65 E-value=5.3 Score=38.44 Aligned_cols=35 Identities=11% Similarity=0.160 Sum_probs=26.5
Q ss_pred hcCcEEEEcCChhHH-HHHHHHHHhCCCeEEEEeCC
Q 012484 24 EKASVCLLNCGPTGS-ETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 24 ~~~~VlivG~g~lG~-eiaknLvl~Gv~~itlvD~d 58 (462)
+.-+|.|||+|..|. ..+.+|...|+.=+.++|.+
T Consensus 3 ~~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~ 38 (336)
T 2p2s_A 3 KKIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESD 38 (336)
T ss_dssp -CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSC
T ss_pred CccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCC
Confidence 456899999999996 67888877777655677743
No 271
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=85.63 E-value=0.78 Score=42.78 Aligned_cols=34 Identities=15% Similarity=0.079 Sum_probs=28.0
Q ss_pred cCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 25 KASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 25 ~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
.++|+|.| .|++|.++++.|+..|. +++++|.+.
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~-~V~~~~r~~ 37 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAE-ILRLADLSP 37 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEE-EEEEEESSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCC-EEEEEecCC
Confidence 46799998 58899999999999995 677877543
No 272
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=85.63 E-value=0.7 Score=45.05 Aligned_cols=38 Identities=13% Similarity=0.107 Sum_probs=33.1
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 21 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 21 ~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
..|..++|.|||+|.+|..+|+.|...|. +++.+|...
T Consensus 142 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~ 179 (331)
T 1xdw_A 142 KEVRNCTVGVVGLGRIGRVAAQIFHGMGA-TVIGEDVFE 179 (331)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCc
Confidence 35889999999999999999999999997 488888643
No 273
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=85.62 E-value=0.73 Score=45.28 Aligned_cols=36 Identities=14% Similarity=0.093 Sum_probs=30.8
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
+...+|+|||+|..|..+|..|.+.|+ +++|+|...
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~-~v~viE~~~ 44 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGW-DVRLHEKSS 44 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEecCC
Confidence 456789999999999999999999997 699999654
No 274
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=85.58 E-value=2.4 Score=41.32 Aligned_cols=33 Identities=9% Similarity=0.031 Sum_probs=25.5
Q ss_pred cCcEEEEcCChhHHHHHHHHHHh-CCCeEEEEeC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLG-GIGSITVIDG 57 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~-Gv~~itlvD~ 57 (462)
..+|.|||+|.+|...+++|... |+.-+.++|.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~ 38 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSR 38 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECS
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECC
Confidence 35899999999999999999876 5443445663
No 275
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=85.58 E-value=0.75 Score=42.94 Aligned_cols=33 Identities=15% Similarity=0.167 Sum_probs=29.9
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
.+|+|||.|..|..+|..|.+.|. +++|+|...
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~-~v~lie~~~ 35 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARK-NILLVDAGE 35 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-CEEEEECCC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 579999999999999999999997 799999653
No 276
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=85.54 E-value=0.71 Score=44.50 Aligned_cols=37 Identities=22% Similarity=0.270 Sum_probs=32.3
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 21 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 21 ~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..|..++|.|||+|.+|..+|+.|...|. +++.+|..
T Consensus 138 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~ 174 (307)
T 1wwk_A 138 IELEGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPY 174 (307)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred cccCCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCC
Confidence 36889999999999999999999999996 58888753
No 277
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=85.52 E-value=1.2 Score=41.74 Aligned_cols=37 Identities=16% Similarity=0.169 Sum_probs=31.0
Q ss_pred HHHhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 21 AALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 21 ~~L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..|++++|+|.| .||+|.++++.|+..|. ++.++|..
T Consensus 11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~ 48 (280)
T 3pgx_A 11 GSLQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDIC 48 (280)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecc
Confidence 357888999998 57899999999999997 57788754
No 278
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=85.50 E-value=1.1 Score=41.83 Aligned_cols=35 Identities=11% Similarity=-0.020 Sum_probs=29.3
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 22 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 22 ~L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
.|.+++|+|.| .|++|.++++.|+..|. +++++|.
T Consensus 28 ~l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r 63 (272)
T 1yb1_A 28 SVTGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDI 63 (272)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEc
Confidence 36778999998 58899999999999996 4777763
No 279
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=85.46 E-value=0.64 Score=45.30 Aligned_cols=32 Identities=22% Similarity=0.336 Sum_probs=28.4
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
--|+|||+|..|+.+|..|++.|+ +++|+|..
T Consensus 5 yDViIVGaGpaGl~~A~~La~~G~-~V~v~Er~ 36 (397)
T 3oz2_A 5 YDVLVVGGGPGGSTAARYAAKYGL-KTLMIEKR 36 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC-cEEEEeCC
Confidence 359999999999999999999998 48898853
No 280
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=85.45 E-value=0.79 Score=43.53 Aligned_cols=31 Identities=19% Similarity=0.358 Sum_probs=27.9
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
.+|.|||+|.+|+.++++|...|. +++++|.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~ 35 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGV-TVYAFDL 35 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTC-EEEEECS
T ss_pred CEEEEECccHHHHHHHHHHHHCCC-eEEEEeC
Confidence 589999999999999999999997 6888874
No 281
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=85.45 E-value=3.7 Score=39.12 Aligned_cols=32 Identities=22% Similarity=0.442 Sum_probs=26.2
Q ss_pred cEEEEc-CChhHHHHHHHHHHh---CC--CeEEEEeCC
Q 012484 27 SVCLLN-CGPTGSETLKNLVLG---GI--GSITVIDGS 58 (462)
Q Consensus 27 ~VlivG-~g~lG~eiaknLvl~---Gv--~~itlvD~d 58 (462)
+|+|.| .|.+|+.+++.|... |+ .+++++|..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~ 39 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSL 39 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECC
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECC
Confidence 699998 588999999999996 53 578888753
No 282
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=85.34 E-value=2.8 Score=40.00 Aligned_cols=35 Identities=14% Similarity=0.123 Sum_probs=28.1
Q ss_pred hcCcEEEEc-CChhHHHHHHHHHHhCC-CeEEEEeCC
Q 012484 24 EKASVCLLN-CGPTGSETLKNLVLGGI-GSITVIDGS 58 (462)
Q Consensus 24 ~~~~VlivG-~g~lG~eiaknLvl~Gv-~~itlvD~d 58 (462)
++.+|+|.| .|.+|+.+++.|...|. -+++++|..
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~ 38 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKL 38 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 345799999 58899999999999984 478887753
No 283
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=85.26 E-value=0.79 Score=42.36 Aligned_cols=32 Identities=19% Similarity=0.398 Sum_probs=28.5
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCC---CeEEEEeC
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGI---GSITVIDG 57 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv---~~itlvD~ 57 (462)
.+|.|||+|.+|+.++++|...|. ..++++|.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r 37 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDL 37 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECS
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeC
Confidence 589999999999999999999997 47888874
No 284
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=85.25 E-value=0.68 Score=45.49 Aligned_cols=36 Identities=11% Similarity=0.172 Sum_probs=32.1
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.|..++|.|||+|.+|..+|+.|...|. +++.+|..
T Consensus 165 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~ 200 (347)
T 1mx3_A 165 RIRGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPY 200 (347)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTT
T ss_pred CCCCCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCC
Confidence 5889999999999999999999999997 58888754
No 285
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=85.23 E-value=1.7 Score=41.97 Aligned_cols=31 Identities=19% Similarity=0.186 Sum_probs=26.8
Q ss_pred cEEEEc-CChhHHHHHHHHHHh-CC-CeEEEEeC
Q 012484 27 SVCLLN-CGPTGSETLKNLVLG-GI-GSITVIDG 57 (462)
Q Consensus 27 ~VlivG-~g~lG~eiaknLvl~-Gv-~~itlvD~ 57 (462)
+|.|+| +|.+|+.++..|... +. ..+.|+|-
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di 35 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDI 35 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECS
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEec
Confidence 799999 899999999999876 54 68999984
No 286
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=85.20 E-value=0.7 Score=44.86 Aligned_cols=35 Identities=17% Similarity=0.220 Sum_probs=31.6
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
.|..++|.|||+|.+|..+|+.|...|. +++.+|.
T Consensus 143 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~ 177 (320)
T 1gdh_A 143 KLDNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDT 177 (320)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECS
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECC
Confidence 5889999999999999999999998885 6888875
No 287
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=85.18 E-value=0.82 Score=42.44 Aligned_cols=34 Identities=18% Similarity=0.257 Sum_probs=28.5
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEe
Q 012484 22 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 56 (462)
Q Consensus 22 ~L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD 56 (462)
.|++++|+|.| .||+|.++++.|+..|.. +.++|
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~ 43 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGAS-VVVTD 43 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTCE-EEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEe
Confidence 36678888888 588999999999999985 77776
No 288
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=85.13 E-value=0.75 Score=43.32 Aligned_cols=27 Identities=15% Similarity=0.171 Sum_probs=23.7
Q ss_pred HhcCcEEEEcC-ChhHHHHHHHHHHhCC
Q 012484 23 LEKASVCLLNC-GPTGSETLKNLVLGGI 49 (462)
Q Consensus 23 L~~~~VlivG~-g~lG~eiaknLvl~Gv 49 (462)
++..+|+|.|+ |.+|+.+++.|...|.
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~ 31 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAG 31 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCC
Confidence 45678999995 8899999999999987
No 289
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=85.13 E-value=0.54 Score=45.80 Aligned_cols=35 Identities=14% Similarity=0.265 Sum_probs=31.0
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcc
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKV 60 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v 60 (462)
...|+|||.|.+|+.+|..|++.|. +++|+|....
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~-~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGL-NVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTC-CEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCC
Confidence 3579999999999999999999997 6999997654
No 290
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=85.08 E-value=0.76 Score=43.51 Aligned_cols=31 Identities=26% Similarity=0.371 Sum_probs=27.6
Q ss_pred cEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 27 SVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 27 ~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
+|.|||+|.+|+.++++|...|. +++++|.+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTC-CEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 69999999999999999999997 68888743
No 291
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=85.05 E-value=0.72 Score=45.85 Aligned_cols=36 Identities=25% Similarity=0.215 Sum_probs=32.3
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
+..++|+|+|+|.+|..+++.+...|. +++++|...
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~ 217 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRP 217 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSG
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 367899999999999999999999998 699998654
No 292
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=84.99 E-value=1.3 Score=41.09 Aligned_cols=35 Identities=11% Similarity=0.149 Sum_probs=29.1
Q ss_pred HHhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 22 ALEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 22 ~L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
.|++++|+|.|. ||+|.++++.|+..|.. +.++|.
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r 43 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGAD-LVLAAR 43 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTCE-EEEEES
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcCE-EEEEeC
Confidence 467788999985 78999999999999974 777763
No 293
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=84.98 E-value=0.84 Score=45.44 Aligned_cols=35 Identities=20% Similarity=0.282 Sum_probs=32.0
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCC-eEEEEeCCc
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIG-SITVIDGSK 59 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~-~itlvD~d~ 59 (462)
+++|+|||.|..|..+|..|.+.|.. ++||+|...
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~ 36 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEK 36 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSS
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCC
Confidence 36899999999999999999999985 899999865
No 294
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=84.93 E-value=1.2 Score=43.47 Aligned_cols=32 Identities=13% Similarity=0.094 Sum_probs=26.9
Q ss_pred cEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 27 SVCLLN-CGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 27 ~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
+|+|.| .|.+|+.+++.|...|.-+++.+|.+
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~ 34 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ 34 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 699999 58899999999999998667776643
No 295
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=84.89 E-value=1.1 Score=43.44 Aligned_cols=93 Identities=12% Similarity=0.034 Sum_probs=54.3
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecChh
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYPE 105 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~~~ 105 (462)
-+|.|||+|+.|...++.| ..|+.=+.++|.+.- .+++.+++...+....+. .+ .+.+
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~------------------~~~~~~~~~~~~~~~~~~--~~-~~~~ 60 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPGVPE------------------EDLSKLEKAISEMNIKPK--KY-NNWW 60 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTT------------------CCCHHHHHHHHTTTCCCE--EC-SSHH
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecCCch------------------hhHHHHHHHHHHcCCCCc--cc-CCHH
Confidence 5899999999999888887 555554445553220 133334444444332222 22 2333
Q ss_pred hhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEE
Q 012484 106 ALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLI 146 (462)
Q Consensus 106 ~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i 146 (462)
++.+. .+.|+|+.++.+ .....+...|.+.|++++
T Consensus 61 ~ll~~-----~~vD~V~I~tp~-~~H~~~~~~al~aGkhVl 95 (337)
T 3ip3_A 61 EMLEK-----EKPDILVINTVF-SLNGKILLEALERKIHAF 95 (337)
T ss_dssp HHHHH-----HCCSEEEECSSH-HHHHHHHHHHHHTTCEEE
T ss_pred HHhcC-----CCCCEEEEeCCc-chHHHHHHHHHHCCCcEE
Confidence 43321 147888877644 455667777888888744
No 296
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=84.88 E-value=0.8 Score=44.69 Aligned_cols=38 Identities=18% Similarity=0.212 Sum_probs=33.0
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 21 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 21 ~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
..|..++|.|||+|.+|..+|+.|...|. +++.+|...
T Consensus 141 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~ 178 (333)
T 1dxy_A 141 KELGQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYP 178 (333)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCc
Confidence 35899999999999999999999999997 488888543
No 297
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=84.83 E-value=0.23 Score=48.94 Aligned_cols=30 Identities=13% Similarity=0.090 Sum_probs=27.0
Q ss_pred cEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 27 SVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 27 ~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
+|.|||+|.+|+.++.+|+..|. .++++|.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~-~V~~~~r 46 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCR-EVCVWHM 46 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEE-EEEEECS
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 89999999999999999999985 6888764
No 298
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=84.82 E-value=2.1 Score=40.99 Aligned_cols=34 Identities=18% Similarity=0.292 Sum_probs=25.5
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHh-CCCeEE-EEeC
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLG-GIGSIT-VIDG 57 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~-Gv~~it-lvD~ 57 (462)
++..+|.|||+|.+|...++.|... ++ +++ ++|.
T Consensus 7 M~~irv~IIG~G~iG~~~~~~l~~~~~~-elvav~d~ 42 (304)
T 3bio_A 7 DKKIRAAIVGYGNIGRYALQALREAPDF-EIAGIVRR 42 (304)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHCTTE-EEEEEECC
T ss_pred CCCCEEEEECChHHHHHHHHHHhcCCCC-EEEEEEcC
Confidence 4567999999999999999999874 43 333 5664
No 299
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=84.80 E-value=1.5 Score=42.41 Aligned_cols=34 Identities=29% Similarity=0.374 Sum_probs=30.5
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
...+|+|.|+|++|.-.+..+...|...++.+|.
T Consensus 160 ~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~ 193 (346)
T 4a2c_A 160 ENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDI 193 (346)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEES
T ss_pred CCCEEEEECCCCcchHHHHHHHHcCCcEEEEEec
Confidence 4578999999999999999999999999988873
No 300
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=84.80 E-value=0.82 Score=40.94 Aligned_cols=30 Identities=30% Similarity=0.257 Sum_probs=26.9
Q ss_pred cEEEEc-CChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 27 SVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 27 ~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
+|+|+| +|.+|+.+++.|...|. +++++|.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~-~V~~~~r 32 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSR 32 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTC-EEEEEES
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 699999 99999999999999996 6888874
No 301
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=84.75 E-value=4.7 Score=39.42 Aligned_cols=87 Identities=20% Similarity=0.234 Sum_probs=48.2
Q ss_pred cCcEEEEcCChhHHH-HHHHHHHh-CCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEec
Q 012484 25 KASVCLLNCGPTGSE-TLKNLVLG-GIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 102 (462)
Q Consensus 25 ~~~VlivG~g~lG~e-iaknLvl~-Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~ 102 (462)
.-+|.|||+|.+|.. .+..|... |+.=+.++|.+. .|+ .+..+.+.+ . .
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~-------------------~~~-------~~~~~~~~~--~-~ 57 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDE-------------------EKV-------KRDLPDVTV--I-A 57 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCH-------------------HHH-------HHHCTTSEE--E-S
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCH-------------------HHH-------HhhCCCCcE--E-C
Confidence 358999999999987 67777654 443333555322 111 123444442 2 2
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEE
Q 012484 103 YPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLI 146 (462)
Q Consensus 103 ~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i 146 (462)
+.+++.+. .+.|+|+.|+.+ .....+...|.+.|++++
T Consensus 58 ~~~~ll~~-----~~~D~V~i~tp~-~~H~~~~~~al~aGk~Vl 95 (364)
T 3e82_A 58 SPEAAVQH-----PDVDLVVIASPN-ATHAPLARLALNAGKHVV 95 (364)
T ss_dssp CHHHHHTC-----TTCSEEEECSCG-GGHHHHHHHHHHTTCEEE
T ss_pred CHHHHhcC-----CCCCEEEEeCCh-HHHHHHHHHHHHCCCcEE
Confidence 33343321 157888877654 344455556667777643
No 302
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=84.74 E-value=1.3 Score=45.07 Aligned_cols=95 Identities=11% Similarity=0.143 Sum_probs=53.5
Q ss_pred HhcCcEEEEcCChh--HHHHHHHHHHhC--CCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEE
Q 012484 23 LEKASVCLLNCGPT--GSETLKNLVLGG--IGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAK 98 (462)
Q Consensus 23 L~~~~VlivG~g~l--G~eiaknLvl~G--v~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~ 98 (462)
+++.+|.|||+|++ |..++..|+..- .+.++|+|-+. .-+. +...+.+.+.+ ...+++
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~~~~~geV~L~Di~~---e~le-------------~~~~~~~~l~~--~~~~I~ 64 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSIDERMSGTVALYDLDF---EAAQ-------------KNEVIGNHSGN--GRWRYE 64 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHCSSCCEEEEEECSSH---HHHH-------------HHHHHHTTSTT--SCEEEE
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhccccCCeEEEEeCCH---HHHH-------------HHHHHHHHHhc--cCCeEE
Confidence 34569999999997 689999988622 24999998432 1000 11111112222 333443
Q ss_pred EEecChhhhhcCCcCCCCCCcEEEEcCC--ChHHHHHHHHHHHHcCc
Q 012484 99 FIEEYPEALIEMNPPFFSQFTLVVATQL--GEEKMIKLDRICREANV 143 (462)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~dvVi~~~~--~~~~~~~l~~~~~~~~i 143 (462)
..+ +. .+.++++|+||.+.. ..+.+..=-++.+++|+
T Consensus 65 ~Tt-D~-------~eAl~dADfVI~airvG~~~~~~~De~ip~k~G~ 103 (450)
T 3fef_A 65 AVS-TL-------KKALSAADIVIISILPGSLDDMEVDVHLPERCGI 103 (450)
T ss_dssp EES-SH-------HHHHTTCSEEEECCCSSCHHHHHHHHHGGGGGTC
T ss_pred EEC-CH-------HHHhcCCCEEEeccccCCcccchhhhhhhhccCc
Confidence 322 11 234678999998764 34444433446667665
No 303
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=84.73 E-value=4.4 Score=38.82 Aligned_cols=30 Identities=7% Similarity=0.203 Sum_probs=23.2
Q ss_pred cEEEEcCChhHHHHHHHHHHhC-CCeEEEEe
Q 012484 27 SVCLLNCGPTGSETLKNLVLGG-IGSITVID 56 (462)
Q Consensus 27 ~VlivG~g~lG~eiaknLvl~G-v~~itlvD 56 (462)
+|.|||+|.+|...++.|...+ +.-+.++|
T Consensus 3 ~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d 33 (325)
T 2ho3_A 3 KLGVIGTGAISHHFIEAAHTSGEYQLVAIYS 33 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred EEEEEeCCHHHHHHHHHHHhCCCeEEEEEEe
Confidence 7999999999999999998764 33233555
No 304
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=84.70 E-value=0.75 Score=45.57 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=31.1
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
...+|+|||+|..|..+|..|.+.|+ +++|+|...
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~-~v~v~E~~~ 38 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGV-DVDVYERSP 38 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence 35689999999999999999999998 699999654
No 305
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=84.55 E-value=0.86 Score=43.71 Aligned_cols=32 Identities=28% Similarity=0.402 Sum_probs=28.7
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.+|.|||+|.+|+.++++|...|. +++++|.+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 679999999999999999999997 58888754
No 306
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=84.54 E-value=1.3 Score=41.57 Aligned_cols=35 Identities=11% Similarity=0.122 Sum_probs=29.4
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 22 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 22 ~L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
.|++++|+|.| .||+|.++++.|+..|. ++.++|.
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 64 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGA-QVAVAAR 64 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 46778899998 58899999999999997 4777764
No 307
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=84.48 E-value=4.7 Score=39.46 Aligned_cols=92 Identities=11% Similarity=0.139 Sum_probs=54.4
Q ss_pred HhcCcEEEEcCChhHH-HHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEe
Q 012484 23 LEKASVCLLNCGPTGS-ETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIE 101 (462)
Q Consensus 23 L~~~~VlivG~g~lG~-eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~ 101 (462)
|+.-+|.|||+|..|. ..+..|...|+.=+.++|.+. .|++.+++. .+.+.+ +
T Consensus 24 m~~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~-------------------~~a~~~a~~----~~~~~~--~- 77 (361)
T 3u3x_A 24 MDELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDD-------------------ALAAEFSAV----YADARR--I- 77 (361)
T ss_dssp --CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCH-------------------HHHHHHHHH----SSSCCE--E-
T ss_pred ccCcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCH-------------------HHHHHHHHH----cCCCcc--c-
Confidence 4567999999999885 467777777776566666322 244443332 232221 2
Q ss_pred cChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEE
Q 012484 102 EYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLI 146 (462)
Q Consensus 102 ~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i 146 (462)
.+.+++.+. .+.|+|+.++.+ .....+...|.+.|++++
T Consensus 78 ~~~~~ll~~-----~~vD~V~I~tp~-~~H~~~~~~al~aGkhVl 116 (361)
T 3u3x_A 78 ATAEEILED-----ENIGLIVSAAVS-SERAELAIRAMQHGKDVL 116 (361)
T ss_dssp SCHHHHHTC-----TTCCEEEECCCH-HHHHHHHHHHHHTTCEEE
T ss_pred CCHHHHhcC-----CCCCEEEEeCCh-HHHHHHHHHHHHCCCeEE
Confidence 233444321 257888877754 455666677778887744
No 308
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=84.47 E-value=1.1 Score=44.77 Aligned_cols=35 Identities=23% Similarity=0.276 Sum_probs=30.7
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
.|..++|.|||+|.+|..+|+.|...|. ++..+|.
T Consensus 188 ~l~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~ 222 (393)
T 2nac_A 188 DLEAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDR 222 (393)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECS
T ss_pred cCCCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEcC
Confidence 4789999999999999999999998885 5777774
No 309
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=84.46 E-value=0.92 Score=45.14 Aligned_cols=35 Identities=20% Similarity=0.247 Sum_probs=31.6
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
.|.+++|.|||+|.+|..+|+.|...|+ +++.+|.
T Consensus 113 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~ 147 (380)
T 2o4c_A 113 DLAERTYGVVGAGQVGGRLVEVLRGLGW-KVLVCDP 147 (380)
T ss_dssp CGGGCEEEEECCSHHHHHHHHHHHHTTC-EEEEECH
T ss_pred ccCCCEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcC
Confidence 6899999999999999999999999997 5778874
No 310
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=84.43 E-value=0.72 Score=46.43 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=30.3
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
.+|+|||+|..|..+|..|++.|+ +++|+|...
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~-~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDV-DVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTC-EEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCC-eEEEEcCCC
Confidence 689999999999999999999998 699999764
No 311
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=84.37 E-value=0.78 Score=45.07 Aligned_cols=36 Identities=14% Similarity=0.104 Sum_probs=31.6
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHH-HhCCCeEEEEeCC
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLV-LGGIGSITVIDGS 58 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLv-l~Gv~~itlvD~d 58 (462)
.|.+++|.|||+|.+|..+|+.|. ..|. +++.+|..
T Consensus 160 ~l~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~~ 196 (348)
T 2w2k_A 160 NPRGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDVA 196 (348)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSS
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECCC
Confidence 588899999999999999999998 8886 68888743
No 312
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=84.33 E-value=1.9 Score=42.13 Aligned_cols=32 Identities=22% Similarity=0.319 Sum_probs=29.0
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEe
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVID 56 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD 56 (462)
..+|+|+|+|++|..++..+-..|...+..+|
T Consensus 180 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~ 211 (363)
T 3m6i_A 180 GDPVLICGAGPIGLITMLCAKAAGACPLVITD 211 (363)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEC
Confidence 57899999999999999999999998888887
No 313
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=84.33 E-value=0.87 Score=44.55 Aligned_cols=34 Identities=18% Similarity=0.260 Sum_probs=30.6
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcc
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKV 60 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v 60 (462)
..|+|||.|..|..+|..|++.|. +++|+|....
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~-~V~vie~~~~ 37 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGV-KTLLVDAFDP 37 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSCS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCCC
Confidence 579999999999999999999997 5999997654
No 314
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=84.30 E-value=1.1 Score=42.21 Aligned_cols=34 Identities=12% Similarity=0.128 Sum_probs=25.7
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEe
Q 012484 22 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 56 (462)
Q Consensus 22 ~L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD 56 (462)
-++.++|+|.| .||+|.++++.|+..|.. +.++|
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~ 55 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGIA-VYGCA 55 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEe
Confidence 35667888888 588999999999999975 77766
No 315
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=84.28 E-value=0.53 Score=49.05 Aligned_cols=36 Identities=14% Similarity=0.156 Sum_probs=32.1
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.|..++|.|||+|.+|..+|+.|...|. +++.+|..
T Consensus 139 ~l~g~~vgIIG~G~IG~~vA~~l~~~G~-~V~~~d~~ 174 (529)
T 1ygy_A 139 EIFGKTVGVVGLGRIGQLVAQRIAAFGA-YVVAYDPY 174 (529)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTT
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEECCC
Confidence 5888999999999999999999999997 68888754
No 316
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=84.27 E-value=0.95 Score=45.02 Aligned_cols=35 Identities=23% Similarity=0.327 Sum_probs=31.6
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
.|.+++|.|||+|.+|..+|+.|...|+ ++..+|.
T Consensus 116 ~l~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~ 150 (381)
T 3oet_A 116 SLRDRTIGIVGVGNVGSRLQTRLEALGI-RTLLCDP 150 (381)
T ss_dssp CGGGCEEEEECCSHHHHHHHHHHHHTTC-EEEEECH
T ss_pred ccCCCEEEEEeECHHHHHHHHHHHHCCC-EEEEECC
Confidence 5889999999999999999999999998 5778874
No 317
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=84.27 E-value=1.2 Score=40.50 Aligned_cols=88 Identities=14% Similarity=0.112 Sum_probs=49.3
Q ss_pred cCcEEEEcCChhHHHHHHH--HHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEec
Q 012484 25 KASVCLLNCGPTGSETLKN--LVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 102 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiakn--Lvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~ 102 (462)
..+|+|+|+|.+|..+++. ....|+.=+-++|.|.-. +|+ .++ .+.+...+
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k--------------~g~-----------~i~-gv~V~~~~- 137 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESK--------------IGT-----------EVG-GVPVYNLD- 137 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEESCTTT--------------TTC-----------EET-TEEEEEGG-
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHH--------------HHh-----------Hhc-CCeeechh-
Confidence 3689999999999999994 335577777788865421 111 000 12222211
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEEE
Q 012484 103 YPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIF 147 (462)
Q Consensus 103 ~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~ 147 (462)
...+ +++..|+|+.|..+.. ...+.+.|.+.|+.-|.
T Consensus 138 dl~e-------li~~~D~ViIAvPs~~-~~ei~~~l~~aGi~~Il 174 (215)
T 2vt3_A 138 DLEQ-------HVKDESVAILTVPAVA-AQSITDRLVALGIKGIL 174 (215)
T ss_dssp GHHH-------HCSSCCEEEECSCHHH-HHHHHHHHHHTTCCEEE
T ss_pred hHHH-------HHHhCCEEEEecCchh-HHHHHHHHHHcCCCEEE
Confidence 1122 2323388888876533 44677888888887543
No 318
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=84.25 E-value=2.6 Score=39.18 Aligned_cols=99 Identities=14% Similarity=0.076 Sum_probs=56.7
Q ss_pred CcEEEEcC-ChhHHHHHHHHHHh--CCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEec
Q 012484 26 ASVCLLNC-GPTGSETLKNLVLG--GIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 102 (462)
Q Consensus 26 ~~VlivG~-g~lG~eiaknLvl~--Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~ 102 (462)
.+|+|.|+ |.+|+.+++.|... |. ++++++.+.- ++. .+.. +.+++ +..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~-------------------~~~----~l~~--~~~~~--~~~ 52 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNVE-------------------KAS----TLAD--QGVEV--RHG 52 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCTT-------------------TTH----HHHH--TTCEE--EEC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCHH-------------------HHh----HHhh--cCCeE--EEe
Confidence 36899986 88999999999988 74 6777764310 111 1111 23332 222
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCC-------ChHHHHHHHHHHHHcCc-eEEEEeeccc
Q 012484 103 YPEALIEMNPPFFSQFTLVVATQL-------GEEKMIKLDRICREANV-MLIFARSYGL 153 (462)
Q Consensus 103 ~~~~~~~~~~~~~~~~dvVi~~~~-------~~~~~~~l~~~~~~~~i-p~i~~~~~G~ 153 (462)
+..+.. .-...++++|+||.+.. +......+.+.|++.++ .+|..++.+.
T Consensus 53 D~~d~~-~l~~~~~~~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~ 110 (287)
T 2jl1_A 53 DYNQPE-SLQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFA 110 (287)
T ss_dssp CTTCHH-HHHHHTTTCSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETTG
T ss_pred ccCCHH-HHHHHHhcCCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCCC
Confidence 211100 01134567899886543 22334566678888876 6777776554
No 319
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=84.24 E-value=0.8 Score=44.97 Aligned_cols=37 Identities=14% Similarity=0.153 Sum_probs=32.4
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 21 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 21 ~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|..
T Consensus 169 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~ 205 (345)
T 4g2n_A 169 MGLTGRRLGIFGMGRIGRAIATRARGFGL-AIHYHNRT 205 (345)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHTTTC-EEEEECSS
T ss_pred cccCCCEEEEEEeChhHHHHHHHHHHCCC-EEEEECCC
Confidence 35889999999999999999999998887 58788754
No 320
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=84.23 E-value=4.9 Score=39.28 Aligned_cols=32 Identities=22% Similarity=0.285 Sum_probs=26.7
Q ss_pred CcEEEEcC-ChhHHHHHHHHH-HhCCCeEEEEeCC
Q 012484 26 ASVCLLNC-GPTGSETLKNLV-LGGIGSITVIDGS 58 (462)
Q Consensus 26 ~~VlivG~-g~lG~eiaknLv-l~Gv~~itlvD~d 58 (462)
.+|+|.|+ |.+|+.+++.|+ ..|. +++++|..
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~-~V~~~~r~ 36 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNH-SVVIVDSL 36 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCC-EEEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCC-EEEEEecC
Confidence 47999985 889999999999 9985 68887743
No 321
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=84.22 E-value=0.81 Score=48.34 Aligned_cols=37 Identities=24% Similarity=0.379 Sum_probs=33.1
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
.|....|+|||.|..|..+|..|++.|+ +++|+|.+.
T Consensus 20 ~M~~~DVvIVGgG~AGl~aA~~Lar~G~-~V~LiEr~~ 56 (591)
T 3i3l_A 20 HMTRSKVAIIGGGPAGSVAGLTLHKLGH-DVTIYERSA 56 (591)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHcCCC-CEEEEcCCC
Confidence 3556899999999999999999999998 799999874
No 322
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=84.16 E-value=0.75 Score=45.66 Aligned_cols=35 Identities=20% Similarity=0.466 Sum_probs=31.4
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcc
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKV 60 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v 60 (462)
+..|+|||+|..|+.+|..|++.|+ +++|+|.+..
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~-~V~v~E~~~~ 39 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGF-KVKIVEKQKF 39 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTC-CEEEECSSCS
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCCC
Confidence 3689999999999999999999998 6999997753
No 323
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=84.13 E-value=1.7 Score=41.20 Aligned_cols=34 Identities=15% Similarity=0.100 Sum_probs=28.6
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEe
Q 012484 22 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 56 (462)
Q Consensus 22 ~L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD 56 (462)
.|++++|+|.| .|++|.++++.|+..|. ++.++|
T Consensus 31 ~l~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~ 65 (291)
T 3cxt_A 31 SLKGKIALVTGASYGIGFAIASAYAKAGA-TIVFND 65 (291)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEe
Confidence 36778899998 58899999999999997 577765
No 324
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=84.06 E-value=0.91 Score=44.71 Aligned_cols=34 Identities=24% Similarity=0.405 Sum_probs=30.4
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
+.+|+|||+|..|..+|..|.+.|+ +++|+|...
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~ 35 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGI-DNVILERQT 35 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTC-CEEEECSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence 3689999999999999999999998 599999654
No 325
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=84.05 E-value=2.5 Score=39.29 Aligned_cols=34 Identities=18% Similarity=0.240 Sum_probs=28.6
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 23 LEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 23 L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
|+++.|+|.| .||+|.++++.|+..|.. +.++|.
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~~-V~~~~r 40 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGAA-VAFCAR 40 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeC
Confidence 5678899998 588999999999999984 777763
No 326
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=84.05 E-value=2.6 Score=41.09 Aligned_cols=76 Identities=14% Similarity=0.169 Sum_probs=49.3
Q ss_pred CcEEEEc-CChhHHHHHHHHHHhCC-Ce-----EEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhC-CCCeE
Q 012484 26 ASVCLLN-CGPTGSETLKNLVLGGI-GS-----ITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELN-DAVKA 97 (462)
Q Consensus 26 ~~VlivG-~g~lG~eiaknLvl~Gv-~~-----itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lN-p~v~v 97 (462)
.+|+|+| +|.+|+.++-.|+..|+ ++ +.|+|-.. .+.|++..+.-|+... |.+.-
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~-----------------~~~~~~g~a~DL~~~~~~~~~~ 66 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITP-----------------MMGVLDGVLMELQDCALPLLKD 66 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGG-----------------GHHHHHHHHHHHHHTCCTTEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCC-----------------ccccchhhHhhhHhhhhcccCC
Confidence 4799999 79999999999999888 45 89998321 1135555556676653 55421
Q ss_pred EEEecChhhhhcCCcCCCCCCcEEEEcC
Q 012484 98 KFIEEYPEALIEMNPPFFSQFTLVVATQ 125 (462)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~dvVi~~~ 125 (462)
...... ..+-++++|+||.+.
T Consensus 67 ~~~~~~-------~~~~~~daDvVvitA 87 (333)
T 5mdh_A 67 VIATDK-------EEIAFKDLDVAILVG 87 (333)
T ss_dssp EEEESC-------HHHHTTTCSEEEECC
T ss_pred EEEcCC-------cHHHhCCCCEEEEeC
Confidence 111111 123467899998764
No 327
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=84.05 E-value=0.87 Score=45.73 Aligned_cols=43 Identities=9% Similarity=0.003 Sum_probs=34.2
Q ss_pred cCHHH--HHHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 15 WGEQG--QAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 15 ~G~~~--q~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
|.... -..|..++|.|||+|.+|+.+|+.|...|. ++..+|..
T Consensus 133 W~~~~~~~~el~gktlGiIGlG~IG~~vA~~l~~~G~-~V~~~d~~ 177 (404)
T 1sc6_A 133 GNKLAAGSFEARGKKLGIIGYGHIGTQLGILAESLGM-YVYFYDIE 177 (404)
T ss_dssp CC-----CCCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred ccccCCCccccCCCEEEEEeECHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 75432 135899999999999999999999999996 58888864
No 328
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=84.02 E-value=1.1 Score=42.58 Aligned_cols=33 Identities=12% Similarity=0.205 Sum_probs=28.1
Q ss_pred HhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEe
Q 012484 23 LEKASVCLLNC-GPTGSETLKNLVLGGIGSITVID 56 (462)
Q Consensus 23 L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD 56 (462)
+.+++|+|.|+ ||+|.++++.|+..|. ++.++|
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~ 62 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA-RLVLSD 62 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEE
Confidence 66788999985 7899999999999997 477765
No 329
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=83.99 E-value=3.5 Score=40.27 Aligned_cols=33 Identities=18% Similarity=0.107 Sum_probs=22.6
Q ss_pred cCcEEEEcCChhHHH-HHHHHHHh-CCCeEEEEeC
Q 012484 25 KASVCLLNCGPTGSE-TLKNLVLG-GIGSITVIDG 57 (462)
Q Consensus 25 ~~~VlivG~g~lG~e-iaknLvl~-Gv~~itlvD~ 57 (462)
.-+|.|||+|.+|.. .+..|... |+.=+.++|.
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~ 39 (358)
T 3gdo_A 5 TIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTS 39 (358)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECS
T ss_pred cceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcC
Confidence 458999999999986 67776544 4433345553
No 330
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=83.98 E-value=1.6 Score=42.15 Aligned_cols=34 Identities=12% Similarity=0.221 Sum_probs=26.2
Q ss_pred cCcEEEEcCChhHHHHHHHHHHh-CCCeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLG-GIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~-Gv~~itlvD~d 58 (462)
.-+|.|+|+|.+|..+++.|... ++.-+.++|.+
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~ 37 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRR 37 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESS
T ss_pred CCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCC
Confidence 45899999999999999999876 44444566643
No 331
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=83.98 E-value=2.1 Score=41.08 Aligned_cols=36 Identities=22% Similarity=0.374 Sum_probs=29.4
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHhCC------CeEEEEeCC
Q 012484 23 LEKASVCLLN-CGPTGSETLKNLVLGGI------GSITVIDGS 58 (462)
Q Consensus 23 L~~~~VlivG-~g~lG~eiaknLvl~Gv------~~itlvD~d 58 (462)
|...+|+|.| .|.+|+.+++.|...|. .+++++|..
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~ 54 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVF 54 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESS
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEcc
Confidence 4456899998 58899999999999993 578888754
No 332
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=83.88 E-value=6.5 Score=35.50 Aligned_cols=98 Identities=15% Similarity=0.096 Sum_probs=51.2
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecC
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY 103 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~ 103 (462)
...+|+.+||| .|.-.. .|+.. ..+++.+|.+ ....+.+++.+....-.-.++.+..+
T Consensus 91 ~~~~vldiG~G-~G~~~~-~l~~~-~~~v~~vD~~-------------------~~~~~~a~~~~~~~~~~~~~~~~~~d 148 (248)
T 2yvl_A 91 KEKRVLEFGTG-SGALLA-VLSEV-AGEVWTFEAV-------------------EEFYKTAQKNLKKFNLGKNVKFFNVD 148 (248)
T ss_dssp TTCEEEEECCT-TSHHHH-HHHHH-SSEEEEECSC-------------------HHHHHHHHHHHHHTTCCTTEEEECSC
T ss_pred CCCEEEEeCCC-ccHHHH-HHHHh-CCEEEEEecC-------------------HHHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 45789999998 455433 33333 5678888732 23455555666554321233444333
Q ss_pred hhhhhcCCcCCCCCCcEEEEcCCCh-HHHHHHHHHHHHcCceEEE
Q 012484 104 PEALIEMNPPFFSQFTLVVATQLGE-EKMIKLDRICREANVMLIF 147 (462)
Q Consensus 104 ~~~~~~~~~~~~~~~dvVi~~~~~~-~~~~~l~~~~~~~~ip~i~ 147 (462)
...... . -..||+|++..... .....+.+..+..|.-++.
T Consensus 149 ~~~~~~--~--~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~ 189 (248)
T 2yvl_A 149 FKDAEV--P--EGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFL 189 (248)
T ss_dssp TTTSCC--C--TTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEE
T ss_pred hhhccc--C--CCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEE
Confidence 222110 0 13699999865443 4455555555555544443
No 333
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=83.87 E-value=5.9 Score=38.52 Aligned_cols=32 Identities=16% Similarity=0.095 Sum_probs=27.6
Q ss_pred CcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 26 ASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 26 ~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
++|+|.|+ |.+|+.+++.|...|. ++++++..
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~r~ 61 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR 61 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC
Confidence 67999996 8899999999999995 68888754
No 334
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=83.87 E-value=0.9 Score=43.85 Aligned_cols=33 Identities=18% Similarity=0.378 Sum_probs=30.2
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
...|+|||.|..|..+|..|++.|. +++|+|..
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~G~-~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAGGH-EVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 3579999999999999999999998 69999976
No 335
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=83.81 E-value=4.2 Score=38.20 Aligned_cols=34 Identities=18% Similarity=0.285 Sum_probs=27.2
Q ss_pred cCcEEEEcC-ChhHHHHHHHHHHh-CCCeEEEEeCC
Q 012484 25 KASVCLLNC-GPTGSETLKNLVLG-GIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~-g~lG~eiaknLvl~-Gv~~itlvD~d 58 (462)
+.+|+|.|+ |.+|+.+++.|... |-.+++++|..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~ 37 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIR 37 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESC
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 368999996 88999999999998 33468887743
No 336
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=83.74 E-value=3.5 Score=40.32 Aligned_cols=94 Identities=13% Similarity=0.037 Sum_probs=49.5
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHh--------CCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhC
Q 012484 21 AALEKASVCLLNCGPTGSETLKNLVLG--------GIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELN 92 (462)
Q Consensus 21 ~~L~~~~VlivG~g~lG~eiaknLvl~--------Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lN 92 (462)
..|+.-+|.|||+|.+|..=++.+... ++.=+-++|.+ ..|++.+++.+
T Consensus 21 ~~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~-------------------~~~a~~~a~~~---- 77 (393)
T 4fb5_A 21 QSMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEAN-------------------AGLAEARAGEF---- 77 (393)
T ss_dssp ---CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC---------------------TTHHHHHHHH----
T ss_pred cCCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCC-------------------HHHHHHHHHHh----
Confidence 457778999999999998766665332 23333444432 22444444333
Q ss_pred CCCeEEEEecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEE
Q 012484 93 DAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLI 146 (462)
Q Consensus 93 p~v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i 146 (462)
+..+ ++ .+.+++.+. .+.|+|+.|+.+ .....+...|-+.|+.++
T Consensus 78 g~~~--~y-~d~~ell~~-----~~iDaV~IatP~-~~H~~~a~~al~aGkhVl 122 (393)
T 4fb5_A 78 GFEK--AT-ADWRALIAD-----PEVDVVSVTTPN-QFHAEMAIAALEAGKHVW 122 (393)
T ss_dssp TCSE--EE-SCHHHHHHC-----TTCCEEEECSCG-GGHHHHHHHHHHTTCEEE
T ss_pred CCCe--ec-CCHHHHhcC-----CCCcEEEECCCh-HHHHHHHHHHHhcCCeEE
Confidence 2112 12 233444332 157788777654 445556666677777533
No 337
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=83.71 E-value=1.8 Score=41.44 Aligned_cols=73 Identities=12% Similarity=0.242 Sum_probs=42.5
Q ss_pred cCcEEEEcCChhHHHHHHHHHH-hCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHh------CCCCeE
Q 012484 25 KASVCLLNCGPTGSETLKNLVL-GGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQEL------NDAVKA 97 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl-~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~l------Np~v~v 97 (462)
-++|||||.|+-|. ++.+.+ .++.+++++|-|. .=.+++++.+.++ +|.+++
T Consensus 84 pk~VLIiGgGdG~~--~revlk~~~v~~v~~VEID~-------------------~Vv~~a~~~lp~~~~~~~~dpRv~v 142 (294)
T 3o4f_A 84 AKHVLIIGGGDGAM--LREVTRHKNVESITMVEIDA-------------------GVVSFCRQYLPNHNAGSYDDPRFKL 142 (294)
T ss_dssp CCEEEEESCTTSHH--HHHHHTCTTCCEEEEEESCH-------------------HHHHHHHHHCHHHHTTGGGCTTEEE
T ss_pred CCeEEEECCCchHH--HHHHHHcCCcceEEEEcCCH-------------------HHHHHHHhcCccccccccCCCcEEE
Confidence 47899999764332 444443 5899999998443 1234444555443 455554
Q ss_pred EEEecChhhhhcCCcCCCCCCcEEEE
Q 012484 98 KFIEEYPEALIEMNPPFFSQFTLVVA 123 (462)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~dvVi~ 123 (462)
+..+...+..... ..||+||.
T Consensus 143 --~~~Dg~~~l~~~~---~~yDvIi~ 163 (294)
T 3o4f_A 143 --VIDDGVNFVNQTS---QTFDVIIS 163 (294)
T ss_dssp --EESCTTTTTSCSS---CCEEEEEE
T ss_pred --EechHHHHHhhcc---ccCCEEEE
Confidence 4444444443322 37999985
No 338
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=83.67 E-value=2 Score=40.53 Aligned_cols=34 Identities=12% Similarity=0.363 Sum_probs=23.0
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
...+|+.+|||+ |. ++..++..|..+++.+|-+.
T Consensus 75 ~~~~VLdiG~G~-G~-~~~~l~~~~~~~v~~vDid~ 108 (281)
T 1mjf_A 75 KPKRVLVIGGGD-GG-TVREVLQHDVDEVIMVEIDE 108 (281)
T ss_dssp CCCEEEEEECTT-SH-HHHHHTTSCCSEEEEEESCH
T ss_pred CCCeEEEEcCCc-CH-HHHHHHhCCCCEEEEEECCH
Confidence 457899999974 32 23334434889999999543
No 339
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=83.64 E-value=2.8 Score=40.19 Aligned_cols=36 Identities=25% Similarity=0.366 Sum_probs=28.5
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 22 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 22 ~L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.+...+|+|.| .|.+|+.+++.|...| .+++++|..
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~ 54 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERG-DKVVGIDNF 54 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEECC
Confidence 45667899998 5889999999999999 478888754
No 340
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=83.61 E-value=0.99 Score=42.76 Aligned_cols=31 Identities=32% Similarity=0.418 Sum_probs=27.6
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
.+|.|||+|.+|..++.+|...|. +++++|.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~ 36 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGY-SLVVSDR 36 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECS
T ss_pred ceEEEECchHHHHHHHHHHHhCCC-EEEEEeC
Confidence 489999999999999999999996 5888874
No 341
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=83.60 E-value=0.91 Score=43.72 Aligned_cols=30 Identities=27% Similarity=0.329 Sum_probs=27.4
Q ss_pred cEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 27 SVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 27 ~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
+|+|||+|.+|+.++.+|...|. .++++|.
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~-~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCC-EEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCC-eEEEEEc
Confidence 69999999999999999999996 7888874
No 342
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=83.56 E-value=3.1 Score=38.53 Aligned_cols=34 Identities=18% Similarity=0.273 Sum_probs=28.5
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEe
Q 012484 22 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 56 (462)
Q Consensus 22 ~L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD 56 (462)
.|.+++|+|.| .||+|.++++.|+..|. ++.++|
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~ 44 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVD 44 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEe
Confidence 46778899998 58899999999999996 577765
No 343
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=83.52 E-value=0.88 Score=46.34 Aligned_cols=35 Identities=31% Similarity=0.301 Sum_probs=30.7
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
..++|+|+|+|++|..+++.|+..|. +++++|.+.
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~ 36 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTL 36 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCH
Confidence 45789999999999999999999995 599998654
No 344
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=83.50 E-value=4.4 Score=38.70 Aligned_cols=35 Identities=11% Similarity=0.047 Sum_probs=25.0
Q ss_pred hcCcEEEEcCChhHHH-HHHHHHH-hCCCeEEEEeCC
Q 012484 24 EKASVCLLNCGPTGSE-TLKNLVL-GGIGSITVIDGS 58 (462)
Q Consensus 24 ~~~~VlivG~g~lG~e-iaknLvl-~Gv~~itlvD~d 58 (462)
+..+|.|||+|.+|.. .++.|.. .|+.-+.++|.+
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~ 40 (319)
T 1tlt_A 4 KKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPT 40 (319)
T ss_dssp -CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSS
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCC
Confidence 3468999999999996 8898876 454433466643
No 345
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=83.43 E-value=0.93 Score=45.43 Aligned_cols=36 Identities=14% Similarity=0.242 Sum_probs=32.3
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
+...+|+|+|+|.+|..+++.+...|. +++++|...
T Consensus 188 v~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~ 223 (405)
T 4dio_A 188 VPAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRP 223 (405)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSST
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCH
Confidence 467899999999999999999999998 799998554
No 346
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=83.41 E-value=4.5 Score=40.02 Aligned_cols=77 Identities=10% Similarity=0.037 Sum_probs=49.0
Q ss_pred CcEEEEc-CChhHHHHHHHHHHhCCC-e---EEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhC-CCCe-EE
Q 012484 26 ASVCLLN-CGPTGSETLKNLVLGGIG-S---ITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELN-DAVK-AK 98 (462)
Q Consensus 26 ~~VlivG-~g~lG~eiaknLvl~Gv~-~---itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lN-p~v~-v~ 98 (462)
.+|.|+| +|.+|+.++-.|+..|+- . +.|+|-+.- .-..|++..+.-|+... |... +.
T Consensus 33 ~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~---------------~~~~~~~G~amDL~h~~~p~~~~v~ 97 (375)
T 7mdh_A 33 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSE---------------RSFQALEGVAMELEDSLYPLLREVS 97 (375)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCG---------------GGHHHHHHHHHHHHTTTCTTEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCcc---------------chhhhhHHHHHhHHhhhhhhcCCcE
Confidence 5799999 799999999999998883 3 777763321 12234555555666654 4432 22
Q ss_pred EEecChhhhhcCCcCCCCCCcEEEEcC
Q 012484 99 FIEEYPEALIEMNPPFFSQFTLVVATQ 125 (462)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~dvVi~~~ 125 (462)
. ... +.+-+++.|+||.+.
T Consensus 98 i-~~~-------~y~~~~daDvVVita 116 (375)
T 7mdh_A 98 I-GID-------PYEVFEDVDWALLIG 116 (375)
T ss_dssp E-ESC-------HHHHTTTCSEEEECC
T ss_pred E-ecC-------CHHHhCCCCEEEEcC
Confidence 2 111 123477899998764
No 347
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=83.41 E-value=0.55 Score=45.85 Aligned_cols=34 Identities=21% Similarity=0.191 Sum_probs=29.4
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCC------CeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGI------GSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv------~~itlvD~d 58 (462)
..+|+|||+|.+|+.++..|+..|. ..++++|.+
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~ 47 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFE 47 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcC
Confidence 3589999999999999999999993 578898854
No 348
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=83.40 E-value=1.4 Score=41.73 Aligned_cols=101 Identities=12% Similarity=0.175 Sum_probs=57.1
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHh-CCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEE
Q 012484 23 LEKASVCLLN-CGPTGSETLKNLVLG-GIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFI 100 (462)
Q Consensus 23 L~~~~VlivG-~g~lG~eiaknLvl~-Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~ 100 (462)
|+.-||+|+| +|.+|.++++.+... ++.=+-++|...-. -. ..|+|. . ..+.+.+. +
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~--~~-------G~d~ge----l-----~g~~~gv~---v 63 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSP--QL-------GQDAGA----F-----LGKQTGVA---L 63 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCT--TT-------TSBTTT----T-----TTCCCSCB---C
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcc--cc-------cccHHH----H-----hCCCCCce---e
Confidence 4456899999 799999999998864 43333334532110 00 112221 0 11223332 1
Q ss_pred ecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEEEEeeccc
Q 012484 101 EEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGL 153 (462)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~ 153 (462)
..+.+. .+.++|+||.++.+ .........|.++++|+|. ++.|+
T Consensus 64 ~~dl~~-------ll~~~DVVIDfT~p-~a~~~~~~~al~~G~~vVi-gTTG~ 107 (272)
T 4f3y_A 64 TDDIER-------VCAEADYLIDFTLP-EGTLVHLDAALRHDVKLVI-GTTGF 107 (272)
T ss_dssp BCCHHH-------HHHHCSEEEECSCH-HHHHHHHHHHHHHTCEEEE-CCCCC
T ss_pred cCCHHH-------HhcCCCEEEEcCCH-HHHHHHHHHHHHcCCCEEE-ECCCC
Confidence 122222 23468999988754 4555677789999999775 45553
No 349
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=83.38 E-value=1.1 Score=43.46 Aligned_cols=33 Identities=18% Similarity=0.277 Sum_probs=29.3
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..+|.|||+|.+|+-||-.++.+|+. ++++|.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~-V~l~D~~ 38 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFR-VKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCC-EEEECSC
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCe-EEEEECC
Confidence 46899999999999999999999985 9999854
No 350
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=83.36 E-value=6.4 Score=37.33 Aligned_cols=71 Identities=11% Similarity=0.183 Sum_probs=40.0
Q ss_pred cCcEEEEcCChhHHHHHHHHHHh-CCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLG-GIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY 103 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~-Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~ 103 (462)
..+|+-+|||. |.- +..|+.. |. +++-+|.. ....+.+++++.+....-.++.+..+
T Consensus 91 ~~~vLDiGcG~-G~~-~~~la~~~~~-~v~gvD~s-------------------~~~~~~a~~~~~~~~~~~~v~~~~~d 148 (318)
T 2fk8_A 91 GMTLLDIGCGW-GTT-MRRAVERFDV-NVIGLTLS-------------------KNQHARCEQVLASIDTNRSRQVLLQG 148 (318)
T ss_dssp TCEEEEESCTT-SHH-HHHHHHHHCC-EEEEEESC-------------------HHHHHHHHHHHHTSCCSSCEEEEESC
T ss_pred cCEEEEEcccc-hHH-HHHHHHHCCC-EEEEEECC-------------------HHHHHHHHHHHHhcCCCCceEEEECC
Confidence 46899999975 433 3334433 65 78888732 22344455566554422234444444
Q ss_pred hhhhhcCCcCCCCCCcEEEEc
Q 012484 104 PEALIEMNPPFFSQFTLVVAT 124 (462)
Q Consensus 104 ~~~~~~~~~~~~~~~dvVi~~ 124 (462)
...+ + ..||+|++.
T Consensus 149 ~~~~----~---~~fD~v~~~ 162 (318)
T 2fk8_A 149 WEDF----A---EPVDRIVSI 162 (318)
T ss_dssp GGGC----C---CCCSEEEEE
T ss_pred hHHC----C---CCcCEEEEe
Confidence 3322 1 579999976
No 351
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=83.36 E-value=1.1 Score=41.17 Aligned_cols=35 Identities=23% Similarity=0.411 Sum_probs=30.0
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 23 LEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 23 L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
|++++|+|.| .|++|.++++.|+..|...+.++|.
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r 38 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDR 38 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEES
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEec
Confidence 5678899998 5889999999999999877888764
No 352
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=83.34 E-value=2.1 Score=41.32 Aligned_cols=33 Identities=6% Similarity=0.002 Sum_probs=24.8
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHh-CCCeEEEEe
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLG-GIGSITVID 56 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~-Gv~~itlvD 56 (462)
+..+|.|||+|.+|...++.|... |+.-+.++|
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d 37 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIAS 37 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBC
T ss_pred CeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEe
Confidence 346899999999999999999885 433233555
No 353
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=83.32 E-value=0.7 Score=46.53 Aligned_cols=38 Identities=18% Similarity=0.245 Sum_probs=33.3
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC-Ccc
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG-SKV 60 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~-d~v 60 (462)
|....|+|||.|..|..+|..|++.|..+++|+|. +.+
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~ 59 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAP 59 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSST
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCC
Confidence 45678999999999999999999999458999997 554
No 354
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=83.31 E-value=0.87 Score=42.68 Aligned_cols=33 Identities=15% Similarity=0.229 Sum_probs=27.0
Q ss_pred HhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEe
Q 012484 23 LEKASVCLLNC-GPTGSETLKNLVLGGIGSITVID 56 (462)
Q Consensus 23 L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD 56 (462)
|.+++|+|.|+ ||+|.++++.|+..|.. +.++|
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~ 35 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAK-ILLGA 35 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCE-EEEEE
Confidence 34567888885 78999999999999974 77776
No 355
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=83.27 E-value=0.93 Score=42.63 Aligned_cols=30 Identities=17% Similarity=0.221 Sum_probs=26.3
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
.+|.|||+|.+|+.++++|.. |. +++++|.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~ 31 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RF-PTLVWNR 31 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TS-CEEEECS
T ss_pred CeEEEEcccHHHHHHHHHHhC-CC-eEEEEeC
Confidence 379999999999999999999 87 5888873
No 356
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=83.26 E-value=5.2 Score=38.57 Aligned_cols=32 Identities=13% Similarity=0.082 Sum_probs=27.7
Q ss_pred CcEEEEcCChhHHH-HHHHHHHhCCCeEEEEeCC
Q 012484 26 ASVCLLNCGPTGSE-TLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 26 ~~VlivG~g~lG~e-iaknLvl~Gv~~itlvD~d 58 (462)
++|.+||.|+.|.. +|+.|...|.. +++.|..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~-V~~~D~~ 37 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFE-VSGCDAK 37 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCE-EEEEESS
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCE-EEEEcCC
Confidence 68999999999996 89999999974 8888853
No 357
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=83.17 E-value=3.6 Score=39.31 Aligned_cols=31 Identities=29% Similarity=0.455 Sum_probs=26.1
Q ss_pred CcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 26 ASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 26 ~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
.+|+|.| .|.+|+.+++.|...|. +++++|.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r 33 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDN 33 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCC-EEEEEeC
Confidence 4799998 58899999999999995 6777764
No 358
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=83.16 E-value=0.93 Score=46.34 Aligned_cols=33 Identities=24% Similarity=0.362 Sum_probs=29.1
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
-.+|.|||+|.+|+-+|.+|+.+|. .++++|.+
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~ 69 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGI-SVVAVESD 69 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 3579999999999999999999997 68898843
No 359
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=83.14 E-value=3.3 Score=40.05 Aligned_cols=32 Identities=13% Similarity=0.155 Sum_probs=28.2
Q ss_pred CcEEEEcC-ChhHHHHHHHHHHhCCC------eEEEEeC
Q 012484 26 ASVCLLNC-GPTGSETLKNLVLGGIG------SITVIDG 57 (462)
Q Consensus 26 ~~VlivG~-g~lG~eiaknLvl~Gv~------~itlvD~ 57 (462)
.+|+|+|+ |.+|+.++..|+..|.. .+.++|.
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di 44 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEI 44 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcC
Confidence 58999997 99999999999998873 7999883
No 360
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=83.08 E-value=1.1 Score=41.79 Aligned_cols=35 Identities=17% Similarity=0.187 Sum_probs=28.4
Q ss_pred HHhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 22 ALEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 22 ~L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
.+++++|+|.|+ ||+|.++++.|+..|. ++.+++.
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r 61 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMGL-KVWINYR 61 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 366788899885 8899999999999998 4666653
No 361
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=83.07 E-value=1.9 Score=40.56 Aligned_cols=36 Identities=17% Similarity=0.174 Sum_probs=30.4
Q ss_pred HHhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 22 ALEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 22 ~L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.|+++.|+|.|+ ||+|.++++.|+..|.. +.++|.+
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~-V~~~~~~ 44 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQEGAD-IIAVDIC 44 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEECC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEecc
Confidence 467888999985 78999999999999975 7888754
No 362
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=83.06 E-value=1 Score=43.34 Aligned_cols=35 Identities=9% Similarity=0.228 Sum_probs=30.9
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHh-CCCeEEEEeC
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLG-GIGSITVIDG 57 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~-Gv~~itlvD~ 57 (462)
....+|.|||+|..|..++++|... |+.+++++|.
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr 168 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNR 168 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 3467899999999999999999988 8889999873
No 363
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=83.01 E-value=3.8 Score=43.86 Aligned_cols=36 Identities=25% Similarity=0.311 Sum_probs=27.8
Q ss_pred HHHhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 21 AALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 21 ~~L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
..++.++|+|.| .|.+|+.+++.|+..|. +++++|.
T Consensus 7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~-~V~~~~r 43 (699)
T 1z45_A 7 SESTSKIVLVTGGAGYIGSHTVVELIENGY-DCVVADN 43 (699)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEC
Confidence 346678999998 58899999999999995 6877764
No 364
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=82.98 E-value=8.1 Score=36.90 Aligned_cols=91 Identities=14% Similarity=0.129 Sum_probs=51.3
Q ss_pred hhhHHhhcCHHHH-HH-HhcCcEEEEcCChhHHHHHHHHHH-hCCCeEEEEeCCcccccCCCcccccccccccccHHHHH
Q 012484 8 YDRQLRIWGEQGQ-AA-LEKASVCLLNCGPTGSETLKNLVL-GGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSV 84 (462)
Q Consensus 8 YdRQl~l~G~~~q-~~-L~~~~VlivG~g~lG~eiaknLvl-~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~ 84 (462)
|++.+++...+.+ .. -...+|+.||||+.|.. +..|++ .| .+++-+|.+ ....+.+
T Consensus 104 ~~~~~~l~~~E~~la~l~~g~rVLDIGcG~G~~t-a~~lA~~~g-a~V~gIDis-------------------~~~l~~A 162 (298)
T 3fpf_A 104 YPRYLELLKNEAALGRFRRGERAVFIGGGPLPLT-GILLSHVYG-MRVNVVEIE-------------------PDIAELS 162 (298)
T ss_dssp HHHHHHHHHHHHHHTTCCTTCEEEEECCCSSCHH-HHHHHHTTC-CEEEEEESS-------------------HHHHHHH
T ss_pred cccHHHHHHHHHHHcCCCCcCEEEEECCCccHHH-HHHHHHccC-CEEEEEECC-------------------HHHHHHH
Confidence 5565555554432 11 13578999999964321 112344 44 578888732 2355556
Q ss_pred HHHHHHhCCCCeEEEEecChhhhhcCCcCCCCCCcEEEEcCC
Q 012484 85 CAFLQELNDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQL 126 (462)
Q Consensus 85 ~~~l~~lNp~v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~ 126 (462)
++++.+..- -+++++..+...+. -..||+|+....
T Consensus 163 r~~~~~~gl-~~v~~v~gDa~~l~------d~~FDvV~~~a~ 197 (298)
T 3fpf_A 163 RKVIEGLGV-DGVNVITGDETVID------GLEFDVLMVAAL 197 (298)
T ss_dssp HHHHHHHTC-CSEEEEESCGGGGG------GCCCSEEEECTT
T ss_pred HHHHHhcCC-CCeEEEECchhhCC------CCCcCEEEECCC
Confidence 666666543 35566665544431 247999997654
No 365
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=82.97 E-value=0.68 Score=45.15 Aligned_cols=37 Identities=22% Similarity=0.293 Sum_probs=32.2
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
.|.+++|.|||+|.+|..+|+.|...|. +++.+|...
T Consensus 142 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~ 178 (330)
T 4e5n_A 142 GLDNATVGFLGMGAIGLAMADRLQGWGA-TLQYHEAKA 178 (330)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHTTTSCC-EEEEECSSC
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCC
Confidence 4889999999999999999999998887 588887543
No 366
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=82.94 E-value=0.84 Score=47.46 Aligned_cols=35 Identities=14% Similarity=0.270 Sum_probs=27.1
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
.+.+++++|+|+||+|..+++.|+..|+ ++++++.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~~G~-~V~i~~R 395 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKEKGA-KVVIANR 395 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHHHCC--CEEEES
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 4667899999999999999999999998 7888763
No 367
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=82.87 E-value=1.1 Score=45.71 Aligned_cols=33 Identities=21% Similarity=0.317 Sum_probs=29.7
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
.+|.|||+|.+|+-||.+|+.+|. .++++|.+.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~-~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGI-ETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-eEEEEECcH
Confidence 689999999999999999999998 799998543
No 368
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=82.86 E-value=1.8 Score=45.20 Aligned_cols=35 Identities=9% Similarity=0.178 Sum_probs=30.3
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
.+.||+|+|+|.+|..+++.|...|.. ++++|.+.
T Consensus 126 ~~~hviI~G~g~~g~~la~~L~~~~~~-vvvid~~~ 160 (565)
T 4gx0_A 126 TRGHILIFGIDPITRTLIRKLESRNHL-FVVVTDNY 160 (565)
T ss_dssp CCSCEEEESCCHHHHHHHHHTTTTTCC-EEEEESCH
T ss_pred cCCeEEEECCChHHHHHHHHHHHCCCC-EEEEECCH
Confidence 357899999999999999999999975 88888553
No 369
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=82.84 E-value=1.1 Score=46.19 Aligned_cols=33 Identities=18% Similarity=0.245 Sum_probs=29.5
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
-.+|.|||+|.+|+.+|.+|+.+|. .++++|.+
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~-~V~l~D~~ 37 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGH-QVLLYDIS 37 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CEEEECSC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC-eEEEEECC
Confidence 4689999999999999999999997 68998844
No 370
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=82.83 E-value=3.8 Score=39.70 Aligned_cols=31 Identities=16% Similarity=0.178 Sum_probs=23.6
Q ss_pred CcEEEEcCChhHHHHHHHHHHh-CCCeEEEEe
Q 012484 26 ASVCLLNCGPTGSETLKNLVLG-GIGSITVID 56 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~-Gv~~itlvD 56 (462)
.+|.|||+|.+|...++.|... |+.-+.++|
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d 34 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISD 34 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEEC
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEEC
Confidence 4799999999999999999874 443333555
No 371
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=82.82 E-value=4.9 Score=38.46 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=26.8
Q ss_pred CcEEEEc-CChhHHHHHHHHHHhCC-CeEEEEeCC
Q 012484 26 ASVCLLN-CGPTGSETLKNLVLGGI-GSITVIDGS 58 (462)
Q Consensus 26 ~~VlivG-~g~lG~eiaknLvl~Gv-~~itlvD~d 58 (462)
.+|+|.| .|.+|+.+++.|...|- .+++++|..
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~ 39 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKL 39 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 5799998 58899999999999953 368888753
No 372
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=82.81 E-value=9.7 Score=33.29 Aligned_cols=77 Identities=9% Similarity=-0.006 Sum_probs=43.8
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhC-CCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEec
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGG-IGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 102 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~G-v~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~ 102 (462)
...+|+-+|||. |. ++..|+..| -++++.+|.+. ...+.+++.+...+- -.++.+..
T Consensus 40 ~~~~vLDiG~G~-G~-~~~~la~~~~~~~v~~vD~s~-------------------~~~~~a~~~~~~~~~-~~v~~~~~ 97 (204)
T 3e05_A 40 DDLVMWDIGAGS-AS-VSIEASNLMPNGRIFALERNP-------------------QYLGFIRDNLKKFVA-RNVTLVEA 97 (204)
T ss_dssp TTCEEEEETCTT-CH-HHHHHHHHCTTSEEEEEECCH-------------------HHHHHHHHHHHHHTC-TTEEEEEC
T ss_pred CCCEEEEECCCC-CH-HHHHHHHHCCCCEEEEEeCCH-------------------HHHHHHHHHHHHhCC-CcEEEEeC
Confidence 356899999984 54 344555554 57888888332 244555556555442 23444444
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCC
Q 012484 103 YPEALIEMNPPFFSQFTLVVATQL 126 (462)
Q Consensus 103 ~~~~~~~~~~~~~~~~dvVi~~~~ 126 (462)
+.... ......||+|++...
T Consensus 98 d~~~~----~~~~~~~D~i~~~~~ 117 (204)
T 3e05_A 98 FAPEG----LDDLPDPDRVFIGGS 117 (204)
T ss_dssp CTTTT----CTTSCCCSEEEESCC
T ss_pred Chhhh----hhcCCCCCEEEECCC
Confidence 33211 112357999997653
No 373
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=82.79 E-value=1.1 Score=42.28 Aligned_cols=32 Identities=16% Similarity=0.355 Sum_probs=29.6
Q ss_pred cEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 27 SVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 27 ~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
+|+|||.|..|..+|..|.+.|..+++|+|.+
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~ 34 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG 34 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSSEEEECSS
T ss_pred eEEEECccHHHHHHHHHHHHCCCCcEEEEcCC
Confidence 69999999999999999999998679999975
No 374
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=82.78 E-value=1.1 Score=45.28 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=32.6
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
.|..++|+|+|.|.+|..+|+.|...|. +++++|.+.
T Consensus 208 ~L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~p 244 (436)
T 3h9u_A 208 MIAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVDP 244 (436)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred cccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCh
Confidence 4668899999999999999999999998 688888654
No 375
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=82.76 E-value=1 Score=46.09 Aligned_cols=37 Identities=11% Similarity=0.127 Sum_probs=32.9
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
.+..++|+|+|.|.+|..+|+.|...|. +++++|.+.
T Consensus 254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~~ 290 (479)
T 1v8b_A 254 LISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDP 290 (479)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCH
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCCh
Confidence 4788999999999999999999999997 688888553
No 376
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=82.71 E-value=1.2 Score=46.33 Aligned_cols=35 Identities=20% Similarity=0.322 Sum_probs=31.3
Q ss_pred cCcEEEEcCChhHHHHHHHHHH---hCCCeEEEEeCCcc
Q 012484 25 KASVCLLNCGPTGSETLKNLVL---GGIGSITVIDGSKV 60 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl---~Gv~~itlvD~d~v 60 (462)
..+|+|||.|..|..+|..|++ .|+ +++|+|.+.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~-~V~liE~~~~ 42 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQA-NITLIESAAI 42 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSC-EEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCC-EEEEECCCCC
Confidence 4689999999999999999999 998 7999997654
No 377
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=82.70 E-value=4.7 Score=39.17 Aligned_cols=32 Identities=19% Similarity=0.148 Sum_probs=22.7
Q ss_pred CcEEEEcCChhHHH-HHHHHHHh-CCCeEEEEeC
Q 012484 26 ASVCLLNCGPTGSE-TLKNLVLG-GIGSITVIDG 57 (462)
Q Consensus 26 ~~VlivG~g~lG~e-iaknLvl~-Gv~~itlvD~ 57 (462)
-+|.|||+|.+|.. .+..|... |+.=+-++|.
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~ 41 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSS 41 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECC
Confidence 58999999999987 77777654 4433335553
No 378
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=82.66 E-value=0.92 Score=45.11 Aligned_cols=37 Identities=16% Similarity=0.207 Sum_probs=32.4
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
.+..++|+|+|+|++|..+++.+...|. +++++|...
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~ 205 (384)
T 1l7d_A 169 TVPPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRA 205 (384)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 3568899999999999999999999998 599998543
No 379
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=82.56 E-value=0.87 Score=45.99 Aligned_cols=35 Identities=20% Similarity=0.351 Sum_probs=31.1
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCC-eEEEEeCC
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIG-SITVIDGS 58 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~-~itlvD~d 58 (462)
...+|+|||+|..|..+|..|.+.|.. +++++|..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~ 40 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERR 40 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecC
Confidence 356899999999999999999999974 89999964
No 380
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=82.50 E-value=1.1 Score=46.17 Aligned_cols=35 Identities=14% Similarity=0.212 Sum_probs=31.3
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
+...+|+|+|+|.+|..+++.|...|. +++++|.+
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~ 306 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEID 306 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 567899999999999999999999997 78888754
No 381
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=82.25 E-value=4.2 Score=36.83 Aligned_cols=104 Identities=12% Similarity=0.031 Sum_probs=53.8
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecC
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY 103 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~ 103 (462)
...+|+-+||| .|.-.+.-.-+.| ++++.+|.+. ...+.+++.+....- -.++....+
T Consensus 91 ~~~~vLdiG~G-~G~~~~~la~~~~-~~v~~vD~~~-------------------~~~~~a~~~~~~~~~-~~v~~~~~d 148 (235)
T 1jg1_A 91 PGMNILEVGTG-SGWNAALISEIVK-TDVYTIERIP-------------------ELVEFAKRNLERAGV-KNVHVILGD 148 (235)
T ss_dssp TTCCEEEECCT-TSHHHHHHHHHHC-SCEEEEESCH-------------------HHHHHHHHHHHHTTC-CSEEEEESC
T ss_pred CCCEEEEEeCC-cCHHHHHHHHHhC-CEEEEEeCCH-------------------HHHHHHHHHHHHcCC-CCcEEEECC
Confidence 45689999998 5655444444445 7888888322 244555566655432 124444433
Q ss_pred hhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEEEEeeccc
Q 012484 104 PEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGL 153 (462)
Q Consensus 104 ~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~ 153 (462)
... ....-..||+|+++.........+.+.++..|.-++.+...+.
T Consensus 149 ~~~----~~~~~~~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~~~~~~ 194 (235)
T 1jg1_A 149 GSK----GFPPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPVGSYHL 194 (235)
T ss_dssp GGG----CCGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEECSSSS
T ss_pred ccc----CCCCCCCccEEEECCcHHHHHHHHHHhcCCCcEEEEEEecCCC
Confidence 210 1011125899997653322222344444445555555554443
No 382
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=82.23 E-value=0.88 Score=42.73 Aligned_cols=34 Identities=15% Similarity=0.195 Sum_probs=28.0
Q ss_pred HHhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEe
Q 012484 22 ALEKASVCLLNC-GPTGSETLKNLVLGGIGSITVID 56 (462)
Q Consensus 22 ~L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD 56 (462)
.|++++|+|.|+ ||+|.++++.|+..|. ++.++|
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~ 57 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGA-RILING 57 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEe
Confidence 466788888884 8899999999999997 577765
No 383
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=82.23 E-value=1.2 Score=43.75 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=30.6
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcc
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKV 60 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v 60 (462)
..|+|||+|..|..+|..|++.|. +++|+|....
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~-~V~vlE~~~~ 38 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGH-RVLVLERHTF 38 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-CEEEEESSCT
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCCC
Confidence 579999999999999999999997 5999997654
No 384
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=82.22 E-value=1.3 Score=42.73 Aligned_cols=31 Identities=19% Similarity=0.292 Sum_probs=26.2
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEE
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVI 55 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlv 55 (462)
...+|+|+|+|++|+.++..|+..|. .++++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGH-EVILI 48 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTC-EEEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCC-eEEEE
Confidence 45789999999999999999999996 56665
No 385
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=82.15 E-value=4.2 Score=39.79 Aligned_cols=82 Identities=13% Similarity=0.171 Sum_probs=49.6
Q ss_pred HHHhcCcEEEEcC-ChhHHHHHHHHHHhCC-C-----eEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCC
Q 012484 21 AALEKASVCLLNC-GPTGSETLKNLVLGGI-G-----SITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELND 93 (462)
Q Consensus 21 ~~L~~~~VlivG~-g~lG~eiaknLvl~Gv-~-----~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp 93 (462)
..++..||+|+|+ |++|+.++-.|+...+ + .+.|+|-. -+..+++-.+--|+....
T Consensus 20 ~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~-----------------~~~~~~~Gva~DL~~~~~ 82 (345)
T 4h7p_A 20 GSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIE-----------------PALKALAGVEAELEDCAF 82 (345)
T ss_dssp --CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCG-----------------GGHHHHHHHHHHHHHTTC
T ss_pred CCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCC-----------------CccccchhhhhhhhhcCc
Confidence 3556679999996 9999999998887654 2 68888721 122344555555666543
Q ss_pred CCeEEEEecChhhhhcCCcCCCCCCcEEEEcC
Q 012484 94 AVKAKFIEEYPEALIEMNPPFFSQFTLVVATQ 125 (462)
Q Consensus 94 ~v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~ 125 (462)
.......... +..+-+++.|+||.+.
T Consensus 83 ~~~~~~~~~~------~~~~a~~~advVvi~a 108 (345)
T 4h7p_A 83 PLLDKVVVTA------DPRVAFDGVAIAIMCG 108 (345)
T ss_dssp TTEEEEEEES------CHHHHTTTCSEEEECC
T ss_pred cCCCcEEEcC------ChHHHhCCCCEEEECC
Confidence 3332222211 1112377999999764
No 386
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=82.14 E-value=0.95 Score=42.50 Aligned_cols=40 Identities=18% Similarity=0.211 Sum_probs=31.8
Q ss_pred HHHHHHhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 18 QGQAALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 18 ~~q~~L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..+..|++++|+|.| .||+|.++++.|+..|.. +.++|.+
T Consensus 3 ~~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~-V~~~~r~ 43 (281)
T 3s55_A 3 GSMADFEGKTALITGGARGMGRSHAVALAEAGAD-IAICDRC 43 (281)
T ss_dssp ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECC
T ss_pred CcccccCCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCC
Confidence 345568889999998 588999999999999975 8888754
No 387
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=82.13 E-value=1.3 Score=42.02 Aligned_cols=35 Identities=17% Similarity=0.262 Sum_probs=31.1
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
...+|+|||.|..|..+|..|.+.|.. ++|+|...
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~-v~vie~~~ 55 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIK-PILYEGMM 55 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC-CEEECCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCC-EEEEecCC
Confidence 457899999999999999999999985 99999754
No 388
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=82.06 E-value=1 Score=44.31 Aligned_cols=37 Identities=19% Similarity=0.244 Sum_probs=32.2
Q ss_pred cCcEEEEcCChhHHHHHHHHHH-hCCCeEEEEeCCccc
Q 012484 25 KASVCLLNCGPTGSETLKNLVL-GGIGSITVIDGSKVE 61 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl-~Gv~~itlvD~d~v~ 61 (462)
...|+|||.|..|..+|..|++ .|..+++|+|...+.
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~~~ 58 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLA 58 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSSTT
T ss_pred cCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCCCC
Confidence 4689999999999999999999 995579999976543
No 389
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=82.03 E-value=3.6 Score=38.33 Aligned_cols=36 Identities=11% Similarity=0.139 Sum_probs=30.5
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 23 LEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 23 L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
|++++|+|.| .||+|.++++.|+..|. ++.++|.+.
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~ 40 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSA 40 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCC
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccc
Confidence 5678899998 58899999999999997 688888654
No 390
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=82.02 E-value=8 Score=37.59 Aligned_cols=33 Identities=9% Similarity=0.207 Sum_probs=24.9
Q ss_pred cCcEEEEcCChhHHHHHHHHHHh-CCCeEEEEeC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLG-GIGSITVIDG 57 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~-Gv~~itlvD~ 57 (462)
.-+|.|||+|.+|...++.|... ++.-+.++|.
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~ 39 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAPNATISGVASR 39 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECS
T ss_pred ceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcC
Confidence 35899999999999999998874 4433445653
No 391
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=82.00 E-value=2.4 Score=38.72 Aligned_cols=35 Identities=14% Similarity=0.123 Sum_probs=29.1
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 22 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 22 ~L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
.+++++|+|.| .||+|.++++.|+..|. ++.++|.
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r 46 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGS 46 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcC
Confidence 46778899998 58899999999999996 5777763
No 392
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=81.96 E-value=2.1 Score=41.94 Aligned_cols=36 Identities=22% Similarity=0.208 Sum_probs=26.2
Q ss_pred hcCcEEEEcCChhHHH-HHHHHHHh-CCCeEEEEeCCc
Q 012484 24 EKASVCLLNCGPTGSE-TLKNLVLG-GIGSITVIDGSK 59 (462)
Q Consensus 24 ~~~~VlivG~g~lG~e-iaknLvl~-Gv~~itlvD~d~ 59 (462)
+.-+|.|||+|.+|.. .+++|... |+.-+.++|.+.
T Consensus 4 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~ 41 (359)
T 3m2t_A 4 SLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDL 41 (359)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSH
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCH
Confidence 3468999999999986 88988765 544344667543
No 393
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=81.96 E-value=10 Score=35.79 Aligned_cols=32 Identities=34% Similarity=0.532 Sum_probs=26.6
Q ss_pred CcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 26 ASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 26 ~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.+|+|.| .|.+|+.+++.|...|. +++++|..
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 34 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGL-SVVVVDNL 34 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 4799998 58899999999999994 67777743
No 394
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=81.92 E-value=1.7 Score=42.69 Aligned_cols=32 Identities=22% Similarity=0.296 Sum_probs=28.4
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEe
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVID 56 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD 56 (462)
..+|+|+|+|++|..++.-+...|..+++.+|
T Consensus 191 g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~ 222 (371)
T 1f8f_A 191 ASSFVTWGAGAVGLSALLAAKVCGASIIIAVD 222 (371)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEC
Confidence 46899999999999999888889998888886
No 395
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=81.84 E-value=3.5 Score=40.29 Aligned_cols=34 Identities=18% Similarity=0.175 Sum_probs=25.4
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHh-CCCeEEEEeC
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLG-GIGSITVIDG 57 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~-Gv~~itlvD~ 57 (462)
+.-+|.|||+|.+|...+.+|... |+.=+.++|.
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~ 38 (359)
T 3e18_A 4 KKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDI 38 (359)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS
T ss_pred CcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcC
Confidence 456899999999999999998876 4433345554
No 396
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=81.83 E-value=0.9 Score=44.96 Aligned_cols=37 Identities=16% Similarity=0.130 Sum_probs=31.8
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 21 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 21 ~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|..
T Consensus 172 ~~l~gktvGIIGlG~IG~~vA~~l~~fG~-~V~~~d~~ 208 (365)
T 4hy3_A 172 RLIAGSEIGIVGFGDLGKALRRVLSGFRA-RIRVFDPW 208 (365)
T ss_dssp CCSSSSEEEEECCSHHHHHHHHHHTTSCC-EEEEECSS
T ss_pred cccCCCEEEEecCCcccHHHHHhhhhCCC-EEEEECCC
Confidence 45889999999999999999999988887 57777743
No 397
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=81.82 E-value=0.78 Score=47.75 Aligned_cols=40 Identities=15% Similarity=0.270 Sum_probs=35.3
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHH----hCC------CeEEEEeCCcc
Q 012484 21 AALEKASVCLLNCGPTGSETLKNLVL----GGI------GSITVIDGSKV 60 (462)
Q Consensus 21 ~~L~~~~VlivG~g~lG~eiaknLvl----~Gv------~~itlvD~d~v 60 (462)
++|+..+|++.|+|+.|.-||+.|+. .|+ ++|.++|..-+
T Consensus 316 k~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~vD~~Gl 365 (605)
T 1o0s_A 316 KLVSQEKYLFFGAGAASTGIAEMIVHQMQNEGISKEEACNRIYLMDIDGL 365 (605)
T ss_dssp CCGGGCCEEEECCSHHHHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTEE
T ss_pred CChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChhhhhCeEEEEECCCc
Confidence 37888999999999999999999998 896 79999997544
No 398
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=81.82 E-value=4.1 Score=34.19 Aligned_cols=36 Identities=11% Similarity=0.162 Sum_probs=29.1
Q ss_pred HH-hcCcEEEEcC----ChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 22 AL-EKASVCLLNC----GPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 22 ~L-~~~~VlivG~----g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.| +..+|+|||+ |.+|..++++|...|.. +.-+++.
T Consensus 9 ll~~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~-v~~vnp~ 49 (140)
T 1iuk_A 9 YLSQAKTIAVLGAHKDPSRPAHYVPRYLREQGYR-VLPVNPR 49 (140)
T ss_dssp HHHHCCEEEEETCCSSTTSHHHHHHHHHHHTTCE-EEEECGG
T ss_pred HHcCCCEEEEECCCCCCCChHHHHHHHHHHCCCE-EEEeCCC
Confidence 35 5789999999 68999999999999984 5555554
No 399
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=81.80 E-value=1.3 Score=43.38 Aligned_cols=32 Identities=28% Similarity=0.427 Sum_probs=28.0
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.+|+|||+|.+|+.+++.|...|. .++++|.+
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~-~V~~~dr~ 40 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANH-SVFGYNRS 40 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSC
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 579999999999999999999994 68888743
No 400
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=81.79 E-value=1.1 Score=41.58 Aligned_cols=29 Identities=14% Similarity=0.189 Sum_probs=25.7
Q ss_pred cEEEEcCChhHHHHHHHHHHhCCCeEEEEe
Q 012484 27 SVCLLNCGPTGSETLKNLVLGGIGSITVID 56 (462)
Q Consensus 27 ~VlivG~g~lG~eiaknLvl~Gv~~itlvD 56 (462)
+|.|||+|.+|+.++++|...|. +++++|
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~-~V~~~~ 30 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSL 30 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTC-EEEECC
T ss_pred eEEEEechHHHHHHHHHHHHCCC-eEEEeC
Confidence 69999999999999999999997 566654
No 401
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=81.76 E-value=1.3 Score=45.41 Aligned_cols=36 Identities=14% Similarity=0.334 Sum_probs=31.1
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcc
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKV 60 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v 60 (462)
....|+|||.|.+|+.+|..|++.|. +++|+|.+.+
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~G~-~V~llE~~~~ 37 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGRGL-SVLMLEAQDL 37 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSST
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCC-CEEEEECCCC
Confidence 35689999999999999999999998 5999997644
No 402
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=81.75 E-value=4.4 Score=37.52 Aligned_cols=40 Identities=8% Similarity=0.015 Sum_probs=32.5
Q ss_pred HHHHhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCCcc
Q 012484 20 QAALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGSKV 60 (462)
Q Consensus 20 q~~L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~d~v 60 (462)
+-.+++++|+|.| .||+|.++++.|+..|. ++.++|.+.-
T Consensus 23 m~~~~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~ 63 (260)
T 3un1_A 23 MMRNQQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIK 63 (260)
T ss_dssp HHHTTCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCC
T ss_pred hhCcCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChh
Confidence 3457788899988 48899999999999997 5888886543
No 403
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=81.66 E-value=1.7 Score=41.41 Aligned_cols=33 Identities=15% Similarity=0.330 Sum_probs=21.7
Q ss_pred hcCcEEEEcCChhHHHHHHHHHH-hCCCeEEEEeCC
Q 012484 24 EKASVCLLNCGPTGSETLKNLVL-GGIGSITVIDGS 58 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl-~Gv~~itlvD~d 58 (462)
...+|+.+|||+ |. ++..++. .|..+++.+|-+
T Consensus 90 ~~~~VLdiG~G~-G~-~~~~l~~~~~~~~v~~vDid 123 (296)
T 1inl_A 90 NPKKVLIIGGGD-GG-TLREVLKHDSVEKAILCEVD 123 (296)
T ss_dssp SCCEEEEEECTT-CH-HHHHHTTSTTCSEEEEEESC
T ss_pred CCCEEEEEcCCc-CH-HHHHHHhcCCCCEEEEEECC
Confidence 457899999874 22 2233333 478999999844
No 404
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=81.49 E-value=1.3 Score=44.42 Aligned_cols=35 Identities=26% Similarity=0.128 Sum_probs=30.4
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCc
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGI-GSITVIDGSK 59 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv-~~itlvD~d~ 59 (462)
.++|+|||.|..|..+|+.|.+.|- .+|||||...
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCC
Confidence 3689999999999999999998876 4899998653
No 405
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=81.49 E-value=1.3 Score=48.72 Aligned_cols=36 Identities=25% Similarity=0.472 Sum_probs=32.8
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcc
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKV 60 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v 60 (462)
...|+|||.|.+|+.+|..|++.|..+++|+|.+..
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPL 39 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCT
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCC
Confidence 578999999999999999999999878999997664
No 406
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=81.48 E-value=4.8 Score=37.42 Aligned_cols=36 Identities=14% Similarity=0.201 Sum_probs=29.8
Q ss_pred HHHhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 21 AALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 21 ~~L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
..|++++|+|.| .|++|.++++.|+..|. +++++|.
T Consensus 28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r 64 (279)
T 1xg5_A 28 ERWRDRLALVTGASGGIGAAVARALVQQGL-KVVGCAR 64 (279)
T ss_dssp GGGTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEC
Confidence 357788999998 58899999999999996 5777653
No 407
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=81.46 E-value=1.3 Score=42.05 Aligned_cols=34 Identities=18% Similarity=0.196 Sum_probs=30.1
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
..+|+|||.|..|..+|..|.+.|. +++|+|...
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~-~v~lie~~~ 40 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQA-SVKIIESLP 40 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHCCC-CEEEEEcCC
Confidence 3589999999999999999999997 699998643
No 408
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=81.46 E-value=2.9 Score=41.63 Aligned_cols=30 Identities=17% Similarity=0.199 Sum_probs=25.6
Q ss_pred cEEEEcCChhHHHHHHHHHHhCCC-------eEEEEe
Q 012484 27 SVCLLNCGPTGSETLKNLVLGGIG-------SITVID 56 (462)
Q Consensus 27 ~VlivG~g~lG~eiaknLvl~Gv~-------~itlvD 56 (462)
||.|+|+|+-|+.+|+.|+..|-+ .++|+-
T Consensus 36 KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~ 72 (391)
T 4fgw_A 36 KVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWV 72 (391)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEEC
T ss_pred eEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEE
Confidence 899999999999999999998743 477764
No 409
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=81.44 E-value=3.1 Score=42.36 Aligned_cols=35 Identities=20% Similarity=0.116 Sum_probs=27.7
Q ss_pred HhcCcEEEEcC-ChhHHHHHHHHHHhCC--CeEEEEeC
Q 012484 23 LEKASVCLLNC-GPTGSETLKNLVLGGI--GSITVIDG 57 (462)
Q Consensus 23 L~~~~VlivG~-g~lG~eiaknLvl~Gv--~~itlvD~ 57 (462)
....+|+|.|+ |.+|+++++.|...+- .++++++.
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R 108 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVR 108 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 35678999995 8899999999999831 46777764
No 410
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=81.40 E-value=9.6 Score=35.34 Aligned_cols=71 Identities=14% Similarity=0.171 Sum_probs=39.7
Q ss_pred cCcEEEEcCChhHHHHHHHHH-HhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecC
Q 012484 25 KASVCLLNCGPTGSETLKNLV-LGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY 103 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLv-l~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~ 103 (462)
..+|+-+|||. |.- +..|+ ..|. +++-+|.+. .-.+.+++++.+....-.++.+..+
T Consensus 65 ~~~vLDiGcG~-G~~-~~~l~~~~~~-~v~gvd~s~-------------------~~~~~a~~~~~~~~~~~~~~~~~~d 122 (287)
T 1kpg_A 65 GMTLLDVGCGW-GAT-MMRAVEKYDV-NVVGLTLSK-------------------NQANHVQQLVANSENLRSKRVLLAG 122 (287)
T ss_dssp TCEEEEETCTT-SHH-HHHHHHHHCC-EEEEEESCH-------------------HHHHHHHHHHHTCCCCSCEEEEESC
T ss_pred cCEEEEECCcc-cHH-HHHHHHHcCC-EEEEEECCH-------------------HHHHHHHHHHHhcCCCCCeEEEECC
Confidence 46899999975 432 33333 4566 888887322 2334444555544332234444444
Q ss_pred hhhhhcCCcCCCCCCcEEEEc
Q 012484 104 PEALIEMNPPFFSQFTLVVAT 124 (462)
Q Consensus 104 ~~~~~~~~~~~~~~~dvVi~~ 124 (462)
...+ + ..||+|++.
T Consensus 123 ~~~~----~---~~fD~v~~~ 136 (287)
T 1kpg_A 123 WEQF----D---EPVDRIVSI 136 (287)
T ss_dssp GGGC----C---CCCSEEEEE
T ss_pred hhhC----C---CCeeEEEEe
Confidence 3322 1 589999976
No 411
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=81.37 E-value=0.9 Score=44.88 Aligned_cols=33 Identities=12% Similarity=0.079 Sum_probs=28.7
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCC------CeEEEEeCC
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGI------GSITVIDGS 58 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv------~~itlvD~d 58 (462)
.+|.|||+|.+|+.++..|+..|. ..++++|.+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~ 60 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRD 60 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECC
Confidence 479999999999999999999992 478898754
No 412
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=81.35 E-value=1.3 Score=44.85 Aligned_cols=36 Identities=14% Similarity=0.243 Sum_probs=31.8
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.|..++|+|+|.|.+|..+|+.|...|. +++++|.+
T Consensus 244 ~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~d 279 (464)
T 3n58_A 244 MMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVD 279 (464)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred cccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 3788999999999999999999999998 68888743
No 413
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=81.31 E-value=1.5 Score=45.03 Aligned_cols=40 Identities=8% Similarity=-0.026 Sum_probs=33.4
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHh-CCCeEEEEeCCcc
Q 012484 21 AALEKASVCLLNCGPTGSETLKNLVLG-GIGSITVIDGSKV 60 (462)
Q Consensus 21 ~~L~~~~VlivG~g~lG~eiaknLvl~-Gv~~itlvD~d~v 60 (462)
++..-.+|+|||+|.+|.-+|.+|+.. |...++++|.+.-
T Consensus 14 ~~~~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 14 ERGPIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp HHCSCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred hcCCCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 334456899999999999999999999 8757999996643
No 414
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=81.30 E-value=1.2 Score=43.80 Aligned_cols=33 Identities=18% Similarity=0.245 Sum_probs=28.8
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..+|.|||+|.+|+.++..|+..|. .++++|.+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~-~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQ-KVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTC-CEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCC-eEEEEeCC
Confidence 3589999999999999999999995 58888753
No 415
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=81.29 E-value=1.4 Score=45.32 Aligned_cols=33 Identities=18% Similarity=0.409 Sum_probs=29.9
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..+|+|||.|..|..+|..|++.|+ +++|+|..
T Consensus 92 ~~dVvIVGgG~aGl~aA~~La~~G~-~V~liEk~ 124 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRAAVELALLGA-RVVLVEKR 124 (497)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCEEEECccHHHHHHHHHHHHCCC-eEEEEEec
Confidence 4689999999999999999999997 69999864
No 416
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=81.28 E-value=1.4 Score=45.88 Aligned_cols=35 Identities=17% Similarity=0.281 Sum_probs=31.4
Q ss_pred cCcEEEEcCChhHHHHHHHHHH---hCCCeEEEEeCCcc
Q 012484 25 KASVCLLNCGPTGSETLKNLVL---GGIGSITVIDGSKV 60 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl---~Gv~~itlvD~d~v 60 (462)
..+|+|||.|..|.-+|..|++ .|+ +++|+|.+..
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~-~V~liE~~~~ 62 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTA-DITLLQAPDI 62 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSS-EEEEEECCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCC-cEEEEeCCCC
Confidence 4689999999999999999999 887 7999997654
No 417
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=81.26 E-value=1.8 Score=41.51 Aligned_cols=38 Identities=18% Similarity=0.188 Sum_probs=30.2
Q ss_pred HHHHhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 20 QAALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 20 q~~L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
+..|.++.|+|.| .||+|.++++.|+..|. ++.++|..
T Consensus 41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~ 79 (317)
T 3oec_A 41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLC 79 (317)
T ss_dssp -CTTTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecc
Confidence 3457778888888 58899999999999998 47777743
No 418
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=81.23 E-value=1.4 Score=44.56 Aligned_cols=36 Identities=11% Similarity=0.196 Sum_probs=31.4
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCC-eEEEEeCCc
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIG-SITVIDGSK 59 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~-~itlvD~d~ 59 (462)
+..+|+|||.|..|..+|..|.+.|.+ +++++|...
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~ 38 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATE 38 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSS
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 457899999999999999999999754 899998754
No 419
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=81.20 E-value=1.4 Score=42.16 Aligned_cols=33 Identities=24% Similarity=0.353 Sum_probs=29.8
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..+|+|||.|..|..+|..|.+.|. +++|+|..
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~-~v~lie~~ 37 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGL-SFRFVDPL 37 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCC
Confidence 4689999999999999999999997 69999964
No 420
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=81.18 E-value=1.4 Score=41.48 Aligned_cols=33 Identities=18% Similarity=0.123 Sum_probs=30.0
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..+|+|||.|..|..+|..|.+.|.. ++|+|..
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~-v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLK-TLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC-EEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCc-EEEEecc
Confidence 46899999999999999999999975 9999976
No 421
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=81.12 E-value=1.3 Score=43.71 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=30.2
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
..+|+|||+|..|..+|..|.+.|+ +++|+|...
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~-~V~viE~~~ 39 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGH-RVVVVEQAR 39 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCC-cEEEEeCCC
Confidence 3579999999999999999999998 599999753
No 422
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=81.09 E-value=1.1 Score=41.62 Aligned_cols=31 Identities=13% Similarity=0.230 Sum_probs=27.2
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
.+|.|||+|.+|..++++|...| ..++++|.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g-~~v~~~~~ 34 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTP-HELIISGS 34 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSS-CEEEEECS
T ss_pred cEEEEECCCHHHHHHHHHHHhCC-CeEEEECC
Confidence 47999999999999999999998 47788763
No 423
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=81.06 E-value=1.9 Score=36.50 Aligned_cols=35 Identities=14% Similarity=0.227 Sum_probs=27.7
Q ss_pred HHh-cCcEEEEcC----ChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 22 ALE-KASVCLLNC----GPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 22 ~L~-~~~VlivG~----g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
.+. ..+|+|||+ |.+|..++++|...|. ++.-+++
T Consensus 18 ll~~p~~iaVVGas~~~g~~G~~~~~~l~~~G~-~v~~Vnp 57 (144)
T 2d59_A 18 ILTRYKKIALVGASPKPERDANIVMKYLLEHGY-DVYPVNP 57 (144)
T ss_dssp HHHHCCEEEEETCCSCTTSHHHHHHHHHHHTTC-EEEEECT
T ss_pred HHcCCCEEEEEccCCCCCchHHHHHHHHHHCCC-EEEEECC
Confidence 343 689999999 5799999999999998 3554544
No 424
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=80.98 E-value=2.3 Score=39.78 Aligned_cols=31 Identities=23% Similarity=0.358 Sum_probs=25.7
Q ss_pred cEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 27 SVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 27 ~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
+|+|.|+ |.+|+.+++.|. .| .+++.++...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g-~~V~~~~r~~ 33 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PV-GNLIALDVHS 33 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TT-SEEEEECTTC
T ss_pred eEEEECCCCHHHHHHHHHhh-cC-CeEEEecccc
Confidence 6999996 889999999999 78 5688877543
No 425
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=80.89 E-value=2.6 Score=40.86 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=29.4
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.+..|+|||.|..|..+|..|+ .|. +++|+|..
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~G~-~V~vlE~~ 40 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-AHG-RVVVLERE 40 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-TTS-CEEEECSS
T ss_pred CcCCEEEECCcHHHHHHHHHHh-CCC-CEEEEECC
Confidence 3678999999999999999999 586 79999976
No 426
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=80.79 E-value=1.5 Score=40.49 Aligned_cols=44 Identities=18% Similarity=0.155 Sum_probs=28.9
Q ss_pred cCHHHHHHHhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 15 WGEQGQAALEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 15 ~G~~~q~~L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
|...-+..-.+++|+|.|+ ||+|.++++.|+..|.. +.++|.+.
T Consensus 12 ~~~~~~~~~m~k~vlITGas~gIG~~la~~l~~~G~~-V~~~~r~~ 56 (251)
T 3orf_A 12 SGLVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWN-TISIDFRE 56 (251)
T ss_dssp ----------CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSC
T ss_pred ccccccccccCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCc
Confidence 4433344445678999985 78999999999999975 88887543
No 427
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=80.68 E-value=1.4 Score=46.99 Aligned_cols=35 Identities=17% Similarity=0.190 Sum_probs=28.1
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHh-CCCeEEEEeCC
Q 012484 23 LEKASVCLLN-CGPTGSETLKNLVLG-GIGSITVIDGS 58 (462)
Q Consensus 23 L~~~~VlivG-~g~lG~eiaknLvl~-Gv~~itlvD~d 58 (462)
++..+|+|.| .|.+|+++++.|... |. +++++|..
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~-~V~~~~r~ 349 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLREDHY-EVYGLDIG 349 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSSSE-EEEEEESC
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcCCC-EEEEEEcC
Confidence 4667899999 588999999999998 54 68888754
No 428
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=80.68 E-value=1.1 Score=41.55 Aligned_cols=35 Identities=26% Similarity=0.347 Sum_probs=29.7
Q ss_pred HHhcCcEEEEcC-C-hhHHHHHHHHHHhCCCeEEEEeC
Q 012484 22 ALEKASVCLLNC-G-PTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 22 ~L~~~~VlivG~-g-~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
.|++++|+|.|. | |+|.++++.|+..|.. +.++|.
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~-V~~~~r 55 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGAD-VVISDY 55 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCE-EEEecC
Confidence 477889999998 6 7999999999999975 777763
No 429
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=80.67 E-value=1.2 Score=41.90 Aligned_cols=36 Identities=11% Similarity=0.157 Sum_probs=29.3
Q ss_pred HHHHhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEe
Q 012484 20 QAALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 56 (462)
Q Consensus 20 q~~L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD 56 (462)
+..+.++.|+|.| .||+|.++++.|+..|. ++.++|
T Consensus 24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~ 60 (280)
T 4da9_A 24 MTQKARPVAIVTGGRRGIGLGIARALAASGF-DIAITG 60 (280)
T ss_dssp CSCCCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred hhccCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEe
Confidence 3456678889998 48899999999999998 477766
No 430
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=80.65 E-value=2.9 Score=41.54 Aligned_cols=32 Identities=22% Similarity=0.395 Sum_probs=28.8
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEe
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVID 56 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD 56 (462)
..+|+|+|+|++|..++.-+...|..+++.+|
T Consensus 214 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~ 245 (404)
T 3ip1_A 214 GDNVVILGGGPIGLAAVAILKHAGASKVILSE 245 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEC
Confidence 46799999999999999999899998888886
No 431
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=80.64 E-value=2 Score=40.84 Aligned_cols=115 Identities=13% Similarity=0.120 Sum_probs=62.1
Q ss_pred cCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecC
Q 012484 25 KASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY 103 (462)
Q Consensus 25 ~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~ 103 (462)
+.+|+|+|+ |..|..++++|...|..-+..+|+...... ..|.+--..+.+.+.+-.+++-+-+..
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~g~~-----------~~G~~vy~sl~el~~~~~~D~viI~tP-- 73 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTT-----------HLGLPVFNTVREAVAATGATASVIYVP-- 73 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCE-----------ETTEEEESSHHHHHHHHCCCEEEECCC--
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcccce-----------eCCeeccCCHHHHhhcCCCCEEEEecC--
Confidence 578999998 889999999999999874446666422111 112111111223333334555443322
Q ss_pred hhhhhcCCcCCC-CCCcEEEE-cC-CChHHHHHHHHHHHHcCceEEEEeecc
Q 012484 104 PEALIEMNPPFF-SQFTLVVA-TQ-LGEEKMIKLDRICREANVMLIFARSYG 152 (462)
Q Consensus 104 ~~~~~~~~~~~~-~~~dvVi~-~~-~~~~~~~~l~~~~~~~~ip~i~~~~~G 152 (462)
+....+.-.+.. .+..++|+ +. .+.+....+.+.|+++++.++...+.|
T Consensus 74 ~~~~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~liGPNc~G 125 (288)
T 2nu8_A 74 APFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNTPG 125 (288)
T ss_dssp GGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEECSSCCE
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEecCCcc
Confidence 111110000011 24555443 32 355556688889999999876555544
No 432
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=80.62 E-value=1.5 Score=44.29 Aligned_cols=36 Identities=17% Similarity=0.145 Sum_probs=31.4
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.|..++|+|+|+|.+|..+|+.|...|. +++++|.+
T Consensus 217 ~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~d 252 (435)
T 3gvp_A 217 MFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEID 252 (435)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred eecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 4578999999999999999999999998 58888743
No 433
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=80.60 E-value=0.94 Score=46.92 Aligned_cols=40 Identities=15% Similarity=0.297 Sum_probs=35.0
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHH----hCC------CeEEEEeCCcc
Q 012484 21 AALEKASVCLLNCGPTGSETLKNLVL----GGI------GSITVIDGSKV 60 (462)
Q Consensus 21 ~~L~~~~VlivG~g~lG~eiaknLvl----~Gv------~~itlvD~d~v 60 (462)
++|+..+|++.|+|+.|.-||+.|+. .|+ ++|.++|..-+
T Consensus 280 k~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~~D~~Gl 329 (564)
T 1pj3_A 280 KPISEHKILFLGAGEAALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGL 329 (564)
T ss_dssp CCGGGCCEEEECCSHHHHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTEE
T ss_pred CcHhHcEEEEeCCCHHHHHHHHHHHHHHHHcCCChHHhhCcEEEEeCCCe
Confidence 37888999999999999999999996 896 78999997544
No 434
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=81.62 E-value=0.33 Score=43.77 Aligned_cols=34 Identities=18% Similarity=0.295 Sum_probs=28.9
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
+...+|.|||+|.+|+.++++|...|. +++++|.
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~-~V~~~~r 50 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGY-SVVFGSR 50 (201)
Confidence 566789999999999999999999986 4666653
No 435
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=80.57 E-value=2.8 Score=38.67 Aligned_cols=34 Identities=18% Similarity=0.237 Sum_probs=28.7
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 23 LEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 23 L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
+++++|+|.| .||+|.++++.|+..|. ++.++|.
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r 39 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRR 39 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 5678899998 57899999999999998 5888764
No 436
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=80.44 E-value=1.5 Score=44.11 Aligned_cols=37 Identities=16% Similarity=0.207 Sum_probs=33.0
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 21 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 21 ~~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..|..++|.|||+|.+|..+|+.|...|. ++..+|..
T Consensus 152 ~el~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~yd~~ 188 (416)
T 3k5p_A 152 REVRGKTLGIVGYGNIGSQVGNLAESLGM-TVRYYDTS 188 (416)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECTT
T ss_pred ccCCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCc
Confidence 35889999999999999999999999997 68888864
No 437
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=80.43 E-value=1.7 Score=42.23 Aligned_cols=35 Identities=14% Similarity=0.250 Sum_probs=30.8
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHh-CCCeEEEEeC
Q 012484 23 LEKASVCLLN-CGPTGSETLKNLVLG-GIGSITVIDG 57 (462)
Q Consensus 23 L~~~~VlivG-~g~lG~eiaknLvl~-Gv~~itlvD~ 57 (462)
+++++|+|.| .|++|+++++.|... |..++++++.
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r 55 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSR 55 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEES
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 5678999998 588999999999999 9888998874
No 438
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=80.35 E-value=3.5 Score=42.17 Aligned_cols=52 Identities=13% Similarity=0.203 Sum_probs=40.4
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHH
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKS 83 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~ 83 (462)
|+.++|+|-|.|-+|+.+|+.|...|..=+++.|.+ ..++.++.+...+...
T Consensus 242 l~g~tVaVQG~GNVG~~aa~~L~e~GakVVavsDs~---------G~iyd~~Gid~~~l~~ 293 (501)
T 3mw9_A 242 FGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESD---------GSIWNPDGIDPKELED 293 (501)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSS---------CEEECTTCCCHHHHHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCC---------ceEECCCCCCHHHHHH
Confidence 568899999999999999999999999888888743 3456666665444433
No 439
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=80.28 E-value=1.2 Score=43.93 Aligned_cols=34 Identities=32% Similarity=0.410 Sum_probs=30.1
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
..++|+|||.|..|...|..|.+.| +++|+|.+.
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g--~V~lie~~~ 40 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY--EVTVIDKEP 40 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS--EEEEECSSS
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC--CEEEEECCC
Confidence 4689999999999999999999999 999999765
No 440
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=80.23 E-value=1.5 Score=44.04 Aligned_cols=35 Identities=26% Similarity=0.359 Sum_probs=30.2
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
....|+|||.|..|..+|..|++.|. +++|+|...
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~-~V~llEk~~ 60 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGR-RVLVIDHAR 60 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence 35789999999999999999999997 599999654
No 441
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=80.20 E-value=4.4 Score=39.98 Aligned_cols=92 Identities=12% Similarity=0.138 Sum_probs=50.5
Q ss_pred CcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecCh
Q 012484 26 ASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYP 104 (462)
Q Consensus 26 ~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~~ 104 (462)
-+|.|+|+ |-+|.|+++-|...+.-.+.|.= +.+....|++-+ + ......+..
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~-------------~as~~saG~~~~---------~-~~~~~~~~~--- 56 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRY-------------LASARSAGKSLK---------F-KDQDITIEE--- 56 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCCCEEEEEE-------------EECTTTTTCEEE---------E-TTEEEEEEE---
T ss_pred cEEEEECCCChHHHHHHHHHhcCCCCcEEEEE-------------EEccccCCCcce---------e-cCCCceEee---
Confidence 48999996 66899999998887554443321 111222333221 0 011222111
Q ss_pred hhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEEEEe
Q 012484 105 EALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFAR 149 (462)
Q Consensus 105 ~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~ 149 (462)
.+.+.+.++|+|+.|......+. +...+.+.|..+|+..
T Consensus 57 -----~~~~~~~~~Dvvf~a~~~~~s~~-~a~~~~~~G~~vIDlS 95 (366)
T 3pwk_A 57 -----TTETAFEGVDIALFSAGSSTSAK-YAPYAVKAGVVVVDNT 95 (366)
T ss_dssp -----CCTTTTTTCSEEEECSCHHHHHH-HHHHHHHTTCEEEECS
T ss_pred -----CCHHHhcCCCEEEECCChHhHHH-HHHHHHHCCCEEEEcC
Confidence 12233678999999886544443 4444556677766643
No 442
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=80.19 E-value=3.7 Score=39.36 Aligned_cols=34 Identities=12% Similarity=0.201 Sum_probs=28.4
Q ss_pred HhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 23 LEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 23 L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
+.+++|+|.|+ ||+|.++++.|+..|. ++.++|.
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r 40 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADI 40 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEEC
Confidence 56778999985 8899999999999997 4777763
No 443
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=80.15 E-value=1.6 Score=44.99 Aligned_cols=36 Identities=25% Similarity=0.442 Sum_probs=31.4
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
+-....|+|||+|..|..+|..|.+.|+. ++|+|..
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~-v~vlE~~ 43 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVE-VVVLERL 43 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCC-EEEEESC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCC-EEEEeCC
Confidence 44567899999999999999999999994 8898854
No 444
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=80.11 E-value=1.2 Score=45.77 Aligned_cols=34 Identities=26% Similarity=0.389 Sum_probs=29.3
Q ss_pred CcEEEEcCChhHHHHHHHHHH---hCCCeEEEEeCCcc
Q 012484 26 ASVCLLNCGPTGSETLKNLVL---GGIGSITVIDGSKV 60 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl---~Gv~~itlvD~d~v 60 (462)
.+|+|||.|..|.-+|-.|++ .|+ +++|+|.+..
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~-~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRI-DVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGS-EEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCC-EEEEEecCCC
Confidence 579999999999999999999 998 7999997654
No 445
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=79.98 E-value=2.8 Score=40.86 Aligned_cols=29 Identities=17% Similarity=0.202 Sum_probs=22.9
Q ss_pred CcEEEEc-CChhHHHHHHHHHHhCCCeEEE
Q 012484 26 ASVCLLN-CGPTGSETLKNLVLGGIGSITV 54 (462)
Q Consensus 26 ~~VlivG-~g~lG~eiaknLvl~Gv~~itl 54 (462)
.+|.|+| .|-+|.++++.|...+...+.+
T Consensus 4 ~kV~I~GAtG~iG~~llr~L~~~~~p~~el 33 (336)
T 2r00_A 4 FNVAIFGATGAVGETMLEVLQEREFPVDEL 33 (336)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEECCCCHHHHHHHHHHhcCCCCCEEE
Confidence 5799999 7889999999998875444433
No 446
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=79.93 E-value=1.5 Score=43.42 Aligned_cols=33 Identities=18% Similarity=0.130 Sum_probs=29.4
Q ss_pred CcEEEEcCChhHHHHHHHHHH---hCCCeEEEEeCCc
Q 012484 26 ASVCLLNCGPTGSETLKNLVL---GGIGSITVIDGSK 59 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl---~Gv~~itlvD~d~ 59 (462)
.+|+|||.|..|.++|..|.+ .|. ++||+|...
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~-~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKA-DVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGS-EEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCC-eEEEEeCCC
Confidence 479999999999999999999 775 799999765
No 447
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=79.90 E-value=4.4 Score=38.81 Aligned_cols=30 Identities=13% Similarity=0.222 Sum_probs=22.6
Q ss_pred CcEEEEcCChhHHH-HHHHHHHh-CCCeEEEEe
Q 012484 26 ASVCLLNCGPTGSE-TLKNLVLG-GIGSITVID 56 (462)
Q Consensus 26 ~~VlivG~g~lG~e-iaknLvl~-Gv~~itlvD 56 (462)
.+|.|||+|.+|.. .++.|... |+ +++++|
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~-~l~v~d 34 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDI-ELVLCT 34 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTE-EEEEEC
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCc-eEEEEe
Confidence 47999999999984 89998764 43 344665
No 448
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=79.88 E-value=1.6 Score=43.42 Aligned_cols=35 Identities=29% Similarity=0.358 Sum_probs=31.6
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCC-eEEEEeCCc
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIG-SITVIDGSK 59 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~-~itlvD~d~ 59 (462)
..+|+|||.|..|..+|..|.+.|.. +++++|.+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 42 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEA 42 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSC
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCC
Confidence 46899999999999999999999985 899999754
No 449
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=79.87 E-value=5.7 Score=38.39 Aligned_cols=89 Identities=7% Similarity=0.069 Sum_probs=51.7
Q ss_pred CcEEEEcCChhHHH-HHHHHHHh-CCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecC
Q 012484 26 ASVCLLNCGPTGSE-TLKNLVLG-GIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY 103 (462)
Q Consensus 26 ~~VlivG~g~lG~e-iaknLvl~-Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~ 103 (462)
-||.|||+|.+|.. .+..|... ++.=+-++|.+ ..|++.+++... ..+ +++ +
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~-------------------~~~a~~~a~~~g----~~~--~y~-d 77 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRD-------------------LTRAREMADRFS----VPH--AFG-S 77 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSS-------------------HHHHHHHHHHHT----CSE--EES-S
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCC-------------------HHHHHHHHHHcC----CCe--eeC-C
Confidence 48999999999975 56666654 33323345522 235555544432 111 122 3
Q ss_pred hhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEE
Q 012484 104 PEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLI 146 (462)
Q Consensus 104 ~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i 146 (462)
.+++.+. .+.|+|+.++.+ .....+...|.+.|++++
T Consensus 78 ~~ell~~-----~~iDaV~I~tP~-~~H~~~~~~al~aGkhVl 114 (350)
T 4had_A 78 YEEMLAS-----DVIDAVYIPLPT-SQHIEWSIKAADAGKHVV 114 (350)
T ss_dssp HHHHHHC-----SSCSEEEECSCG-GGHHHHHHHHHHTTCEEE
T ss_pred HHHHhcC-----CCCCEEEEeCCC-chhHHHHHHHHhcCCEEE
Confidence 4444332 257899888755 455666777888888744
No 450
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=79.82 E-value=1.4 Score=45.31 Aligned_cols=37 Identities=14% Similarity=0.118 Sum_probs=32.3
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
.|..++|+|+|.|.+|..+|+.|...|. +++++|.+.
T Consensus 274 ~L~GktVgIIG~G~IG~~vA~~l~~~G~-~V~v~d~~~ 310 (494)
T 3d64_A 274 MIAGKIAVVAGYGDVGKGCAQSLRGLGA-TVWVTEIDP 310 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSCH
T ss_pred ccCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCh
Confidence 3788999999999999999999999996 688887543
No 451
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=79.79 E-value=1.8 Score=40.84 Aligned_cols=36 Identities=14% Similarity=0.349 Sum_probs=31.0
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHh-CCCeEEEEeCCc
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLG-GIGSITVIDGSK 59 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~-Gv~~itlvD~d~ 59 (462)
.....|+|||.|..|..+|..|++. |. +++|+|...
T Consensus 37 ~~~~dVvIIGgG~aGl~aA~~la~~~G~-~V~viEk~~ 73 (284)
T 1rp0_A 37 YAETDVVVVGAGSAGLSAAYEISKNPNV-QVAIIEQSV 73 (284)
T ss_dssp HTEEEEEEECCSHHHHHHHHHHHTSTTS-CEEEEESSS
T ss_pred ccccCEEEECccHHHHHHHHHHHHcCCC-eEEEEECCC
Confidence 4567899999999999999999996 87 699998653
No 452
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=79.79 E-value=1.4 Score=41.20 Aligned_cols=33 Identities=15% Similarity=0.179 Sum_probs=27.0
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEe
Q 012484 23 LEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 56 (462)
Q Consensus 23 L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD 56 (462)
|+++.++|-| .+|+|.++|+.|+..|. ++.+.|
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~ 40 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGA-RVILND 40 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEE
Confidence 5667777777 58899999999999998 477765
No 453
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=79.71 E-value=1.4 Score=44.02 Aligned_cols=35 Identities=26% Similarity=0.323 Sum_probs=31.1
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
++..|+|||.|..|..+|..|+..|. +++|+|...
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~-~V~vlEk~~ 37 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGK 37 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 35689999999999999999999998 699999654
No 454
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=79.70 E-value=5.6 Score=36.81 Aligned_cols=37 Identities=14% Similarity=0.102 Sum_probs=30.7
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 22 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 22 ~L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
.|++++|+|.| .||+|.++++.|+..|. +++++|.+.
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~ 42 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHD 42 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCc
Confidence 46778899998 58899999999999997 588887543
No 455
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=79.69 E-value=1.7 Score=41.33 Aligned_cols=33 Identities=18% Similarity=0.371 Sum_probs=29.9
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..+|+|||.|..|..+|..|.+.|. +++|+|..
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~-~v~lie~~ 48 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGF-SVAILDKA 48 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeCC
Confidence 4689999999999999999999997 59999974
No 456
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=79.46 E-value=1.7 Score=41.38 Aligned_cols=33 Identities=15% Similarity=0.254 Sum_probs=30.1
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..+|+|||.|..|..+|..|.+.|. +++|+|..
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~-~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQL-STLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCC-cEEEEeCC
Confidence 4579999999999999999999997 69999976
No 457
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=79.45 E-value=1.6 Score=44.39 Aligned_cols=33 Identities=27% Similarity=0.412 Sum_probs=30.0
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..+|+|||.|..|..+|..|.+.|. +++|+|..
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~G~-~V~v~e~~ 154 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAKGY-EVHVYDRY 154 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecc
Confidence 4689999999999999999999997 59999864
No 458
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=79.41 E-value=2.7 Score=40.41 Aligned_cols=33 Identities=18% Similarity=0.298 Sum_probs=21.5
Q ss_pred hcCcEEEEcCChhHHHHHHHHHH-hCCCeEEEEeCC
Q 012484 24 EKASVCLLNCGPTGSETLKNLVL-GGIGSITVIDGS 58 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl-~Gv~~itlvD~d 58 (462)
...+|+.+|||.- . ++..|+. .+..+++.+|-+
T Consensus 77 ~~~~VLdiG~G~G-~-~~~~l~~~~~~~~v~~vDid 110 (314)
T 1uir_A 77 EPKRVLIVGGGEG-A-TLREVLKHPTVEKAVMVDID 110 (314)
T ss_dssp CCCEEEEEECTTS-H-HHHHHTTSTTCCEEEEEESC
T ss_pred CCCeEEEEcCCcC-H-HHHHHHhcCCCCEEEEEECC
Confidence 3578999998742 2 2333333 467899999844
No 459
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=79.39 E-value=1.6 Score=44.09 Aligned_cols=31 Identities=19% Similarity=0.246 Sum_probs=28.3
Q ss_pred cEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 27 SVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 27 ~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
+|+|||+|.+|+.+|..|+..|. +++++|.+
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~-~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC-EEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 69999999999999999999997 68999864
No 460
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=79.36 E-value=2.2 Score=43.79 Aligned_cols=30 Identities=17% Similarity=0.221 Sum_probs=27.4
Q ss_pred HHHHHHhc-CcEEEEcCChhHHHHHHHHHHh
Q 012484 18 QGQAALEK-ASVCLLNCGPTGSETLKNLVLG 47 (462)
Q Consensus 18 ~~q~~L~~-~~VlivG~g~lG~eiaknLvl~ 47 (462)
...+.|+. ++|.|||+|.+|..+|++|..+
T Consensus 46 ~~~~~L~GiKkIgIIGlGsMG~AmA~nLr~s 76 (525)
T 3fr7_A 46 LLPEAFKGIKQIGVIGWGSQGPAQAQNLRDS 76 (525)
T ss_dssp GHHHHTTTCSEEEEECCTTHHHHHHHHHHHH
T ss_pred cChHHhcCCCEEEEEeEhHHHHHHHHHHHhc
Confidence 34678899 9999999999999999999999
No 461
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=79.30 E-value=2.4 Score=41.93 Aligned_cols=33 Identities=15% Similarity=0.149 Sum_probs=29.7
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.++|+|||.|.+|.|+|..|...|. ++|+++..
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~-~Vtvv~~~ 178 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGT-PASIGIIL 178 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC-eEEEEEcC
Confidence 6899999999999999999999996 68998753
No 462
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=79.26 E-value=1.8 Score=42.63 Aligned_cols=36 Identities=19% Similarity=0.256 Sum_probs=31.7
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.|..++|.|+|+|.+|..+++.|...|. ++.+.|.+
T Consensus 172 ~L~GktV~I~G~GnVG~~~A~~l~~~Ga-kVvvsD~~ 207 (355)
T 1c1d_A 172 SLDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTD 207 (355)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 4778999999999999999999999998 67788753
No 463
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=79.24 E-value=5.6 Score=38.57 Aligned_cols=89 Identities=12% Similarity=0.144 Sum_probs=47.7
Q ss_pred CcEEEEcCChhHH-HHHHHHHHh-CCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEEEecC
Q 012484 26 ASVCLLNCGPTGS-ETLKNLVLG-GIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY 103 (462)
Q Consensus 26 ~~VlivG~g~lG~-eiaknLvl~-Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~~~~~ 103 (462)
-+|.|||+|.+|. ..+..|... |+.=+.++|.+ +++.+++... .|.+.+ + .+
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~---------------------~~~~~a~~~~--~~~~~~--~-~~ 56 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH---------------------VNEKAAAPFK--EKGVNF--T-AD 56 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT---------------------CCHHHHHHHH--TTTCEE--E-SC
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC---------------------HHHHHHHhhC--CCCCeE--E-CC
Confidence 4899999999998 566666543 44333455543 1112222221 133332 2 23
Q ss_pred hhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEE
Q 012484 104 PEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLI 146 (462)
Q Consensus 104 ~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i 146 (462)
.+++.+. .+.|+|+.++.+ .....+...|.+.|++++
T Consensus 57 ~~~ll~~-----~~~D~V~i~tp~-~~h~~~~~~al~aGk~Vl 93 (349)
T 3i23_A 57 LNELLTD-----PEIELITICTPA-HTHYDLAKQAILAGKSVI 93 (349)
T ss_dssp THHHHSC-----TTCCEEEECSCG-GGHHHHHHHHHHTTCEEE
T ss_pred HHHHhcC-----CCCCEEEEeCCc-HHHHHHHHHHHHcCCEEE
Confidence 3343321 147888877755 444555566677777644
No 464
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=79.21 E-value=2.4 Score=40.76 Aligned_cols=42 Identities=17% Similarity=0.200 Sum_probs=31.9
Q ss_pred CHHHHHHHhcCcEEEEc-CChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 16 GEQGQAALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 16 G~~~q~~L~~~~VlivG-~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
|...+..|.+++|+|.| .||+|.++++.|+..|. ++.++|.+
T Consensus 18 ~p~~m~~l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~ 60 (322)
T 3qlj_A 18 GPGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIG 60 (322)
T ss_dssp ----CCTTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCC
T ss_pred CCchhcccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCc
Confidence 34445567888888888 57899999999999997 68888754
No 465
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=79.16 E-value=1.7 Score=43.20 Aligned_cols=46 Identities=17% Similarity=0.386 Sum_probs=30.7
Q ss_pred hhcCHHHHHHHhc--CcEEEEcCChhHHHHHHHHHHh--CCCeEEEEeCCcc
Q 012484 13 RIWGEQGQAALEK--ASVCLLNCGPTGSETLKNLVLG--GIGSITVIDGSKV 60 (462)
Q Consensus 13 ~l~G~~~q~~L~~--~~VlivG~g~lG~eiaknLvl~--Gv~~itlvD~d~v 60 (462)
..|...++. |.. ..|+|||.|..|+.+|..|++. |. +++|+|....
T Consensus 23 ~~~~~~~~~-m~~~~~dVvIIGaGi~Gls~A~~La~~~pG~-~V~vlE~~~~ 72 (405)
T 3c4n_A 23 SVWAHVGQH-FTEEAFDIVVIGAGRMGAACAFYLRQLAPGR-SLLLVEEGGL 72 (405)
T ss_dssp ------------CCEEEEEEECCSHHHHHHHHHHHHHCTTS-CEEEECSSCS
T ss_pred CcccccCCC-CCcCcCCEEEECCcHHHHHHHHHHHhcCCCC-eEEEEeCCCC
Confidence 456655443 432 5799999999999999999999 98 5999997643
No 466
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=79.12 E-value=8.1 Score=37.36 Aligned_cols=25 Identities=16% Similarity=0.361 Sum_probs=21.4
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHh
Q 012484 23 LEKASVCLLNCGPTGSETLKNLVLG 47 (462)
Q Consensus 23 L~~~~VlivG~g~lG~eiaknLvl~ 47 (462)
|+.-+|.|+|+|.+|+.+++.|...
T Consensus 2 Mk~irVgIiG~G~VG~~~~~~L~~~ 26 (325)
T 3ing_A 2 MKEIRIILMGTGNVGLNVLRIIDAS 26 (325)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHH
T ss_pred CceEEEEEEcCcHHHHHHHHHHHhc
Confidence 3456899999999999999999874
No 467
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=79.10 E-value=4.5 Score=38.57 Aligned_cols=34 Identities=12% Similarity=0.268 Sum_probs=26.9
Q ss_pred cCcEEEEcCChhHHHHHHHHHHh-CCCeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLG-GIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~-Gv~~itlvD~d 58 (462)
..+|.|||+|.+|...++.|... |+.-+.++|.+
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~ 44 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVRLASSN 44 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESC
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCC
Confidence 35899999999999999999885 55445577754
No 468
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=79.03 E-value=1.1 Score=42.17 Aligned_cols=22 Identities=14% Similarity=0.006 Sum_probs=18.2
Q ss_pred CcEEEEcCChhHHHHHHHHHHh
Q 012484 26 ASVCLLNCGPTGSETLKNLVLG 47 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~ 47 (462)
.+|.|||+|.+|..+++.|...
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~ 24 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR 24 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC--
T ss_pred ceEEEEeCCHHHHHHHHHHHHc
Confidence 3799999999999999999876
No 469
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=79.01 E-value=2.5 Score=44.31 Aligned_cols=35 Identities=17% Similarity=0.277 Sum_probs=31.1
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCcc
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKV 60 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~v 60 (462)
...|+|||.|.+|+.+|..|+..|. +++|+|...+
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~-~V~LlE~~~~ 66 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGI-KTGLIEMQDF 66 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCCC
Confidence 4689999999999999999999997 5999997544
No 470
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=78.97 E-value=1.8 Score=44.37 Aligned_cols=35 Identities=17% Similarity=0.192 Sum_probs=30.8
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
.+.+|+|||+|.+|.-+|..|+..|. +++++|.+.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~-~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGH-DVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCC-EEEEEECCH
Confidence 35789999999999999999999997 599998653
No 471
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=78.90 E-value=1.9 Score=41.71 Aligned_cols=34 Identities=18% Similarity=0.047 Sum_probs=30.3
Q ss_pred cEEEEcCChhHHHHHHHHHHhC-----CCeEEEEeCCcc
Q 012484 27 SVCLLNCGPTGSETLKNLVLGG-----IGSITVIDGSKV 60 (462)
Q Consensus 27 ~VlivG~g~lG~eiaknLvl~G-----v~~itlvD~d~v 60 (462)
.|+|||.|.+|+.+|..|++.| -.+++|+|...+
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 6999999999999999999998 258999998754
No 472
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=78.87 E-value=1.9 Score=43.38 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=31.6
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCC-eEEEEeCCc
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIG-SITVIDGSK 59 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~-~itlvD~d~ 59 (462)
..+|+|||.|..|..+|..|.+.|.. +++++|.+.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDAT 39 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCC
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCC
Confidence 46899999999999999999999985 899999754
No 473
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=78.84 E-value=1.6 Score=41.48 Aligned_cols=30 Identities=20% Similarity=0.277 Sum_probs=26.4
Q ss_pred cEEEEcCChhHHHHHHHHHHh-----CCCeEEEEe
Q 012484 27 SVCLLNCGPTGSETLKNLVLG-----GIGSITVID 56 (462)
Q Consensus 27 ~VlivG~g~lG~eiaknLvl~-----Gv~~itlvD 56 (462)
+|+|||+|.+|+.++..|... |...++++|
T Consensus 10 ~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~ 44 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIA 44 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEE
Confidence 799999999999999999999 733688876
No 474
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=78.84 E-value=4.9 Score=41.15 Aligned_cols=109 Identities=13% Similarity=0.128 Sum_probs=59.5
Q ss_pred CcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHH---------hCCCC
Q 012484 26 ASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQE---------LNDAV 95 (462)
Q Consensus 26 ~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~---------lNp~v 95 (462)
.+|+|.|+ |.+|+.+++.|...|. +++.++...-. ....+.+.+.+.. ..+.+
T Consensus 151 ~~VLVTGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~----------------~~~~~~l~~~l~~~~~~~~~~~~~~~v 213 (508)
T 4f6l_B 151 GNTLLTGATGFLGAYLIEALQGYSH-RIYCFIRADNE----------------EIAWYKLMTNLNDYFSEETVEMMLSNI 213 (508)
T ss_dssp EEEEESCTTSHHHHHHHHHTBTTEE-EEEEEEESSSH----------------HHHHHHHHHHHHHHSCHHHHHHHSTTE
T ss_pred CeEEEECCccchHHHHHHHHHhcCC-EEEEEECCCCh----------------HHHHHHHHHHHHHhcccccchhccCce
Confidence 57999996 8899999999955553 56555421100 0011112222222 23344
Q ss_pred eEEEEecChhhhhcCCcCCCCCCcEEEEcCCC--------------hHHHHHHHHHHHHcCceEEEEeeccceEE
Q 012484 96 KAKFIEEYPEALIEMNPPFFSQFTLVVATQLG--------------EEKMIKLDRICREANVMLIFARSYGLTGF 156 (462)
Q Consensus 96 ~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~--------------~~~~~~l~~~~~~~~ip~i~~~~~G~~G~ 156 (462)
. ++..+..+. .......++|+||.+... ......+.+.|.+.+.++|.+++.+. |.
T Consensus 214 ~--~v~~Dl~d~--~~l~~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~v-G~ 283 (508)
T 4f6l_B 214 E--VIVGDFECM--DDVVLPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GT 283 (508)
T ss_dssp E--EEEEBTTBC--SSCCCSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCT-TS
T ss_pred E--EEecCCccc--ccCCCccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhh-cc
Confidence 3 343332211 111145689999965432 12234556677777788898888776 53
No 475
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=78.79 E-value=3.6 Score=37.83 Aligned_cols=33 Identities=21% Similarity=0.111 Sum_probs=26.8
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHH---hCCCeEEEEe
Q 012484 23 LEKASVCLLN-CGPTGSETLKNLVL---GGIGSITVID 56 (462)
Q Consensus 23 L~~~~VlivG-~g~lG~eiaknLvl---~Gv~~itlvD 56 (462)
|++++++|.| .||+|.++++.|+. .|. ++.++|
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~ 40 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSA 40 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEE
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEe
Confidence 5567788887 58899999999999 787 577776
No 476
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=78.78 E-value=1.5 Score=42.42 Aligned_cols=33 Identities=21% Similarity=0.312 Sum_probs=29.9
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
..+|+|||.|..|..+|..|.+.|. +++|+|..
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~-~v~lie~~ 46 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNI-SCRIIESM 46 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC-CEEEEecC
Confidence 4689999999999999999999997 69999864
No 477
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=78.78 E-value=4.8 Score=40.79 Aligned_cols=22 Identities=36% Similarity=0.413 Sum_probs=19.2
Q ss_pred hcCcEEEEcCChhHHHHHHHHH
Q 012484 24 EKASVCLLNCGPTGSETLKNLV 45 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLv 45 (462)
+.-+|.|+|+|.+|+.+++.|.
T Consensus 9 k~irIgIIG~G~VG~~~~~~L~ 30 (444)
T 3mtj_A 9 KPIHVGLLGLGTVGGGTLTVLR 30 (444)
T ss_dssp SCEEEEEECCHHHHHHHHHHHH
T ss_pred CcccEEEECCCHHHHHHHHHHH
Confidence 4568999999999999998876
No 478
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=78.71 E-value=2.4 Score=40.05 Aligned_cols=34 Identities=18% Similarity=0.338 Sum_probs=21.5
Q ss_pred hcCcEEEEcCChhHHHHHHHHHH-hCCCeEEEEeCCc
Q 012484 24 EKASVCLLNCGPTGSETLKNLVL-GGIGSITVIDGSK 59 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl-~Gv~~itlvD~d~ 59 (462)
...+|+++|||. |.- +..+++ .++.+++.+|-+.
T Consensus 78 ~~~~VLdiG~G~-G~~-~~~l~~~~~~~~v~~vDid~ 112 (283)
T 2i7c_A 78 EPKNVLVVGGGD-GGI-IRELCKYKSVENIDICEIDE 112 (283)
T ss_dssp SCCEEEEEECTT-SHH-HHHHTTCTTCCEEEEEESCH
T ss_pred CCCeEEEEeCCc-CHH-HHHHHHcCCCCEEEEEECCH
Confidence 346899999873 222 223333 4678999998443
No 479
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=78.67 E-value=6.3 Score=38.87 Aligned_cols=32 Identities=6% Similarity=-0.031 Sum_probs=23.6
Q ss_pred CcEEEEcCC-hhHHHHHHHHHHh-CCCeEEEEeC
Q 012484 26 ASVCLLNCG-PTGSETLKNLVLG-GIGSITVIDG 57 (462)
Q Consensus 26 ~~VlivG~g-~lG~eiaknLvl~-Gv~~itlvD~ 57 (462)
-+|.|||+| ..|...+.+|... |+.-+.++|.
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~ 36 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDP 36 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECS
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeC
Confidence 479999999 8888899998874 4433445553
No 480
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=78.67 E-value=2 Score=41.64 Aligned_cols=40 Identities=30% Similarity=0.387 Sum_probs=28.4
Q ss_pred HHHHHhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 19 GQAALEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 19 ~q~~L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
.+..+.+.+|+|.|+ |.+|+.+++.|...|...+++++..
T Consensus 40 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 80 (357)
T 2x6t_A 40 GGSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNL 80 (357)
T ss_dssp --------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred ccccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecC
Confidence 344566789999996 8899999999999996678888754
No 481
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=78.61 E-value=4.8 Score=37.78 Aligned_cols=37 Identities=14% Similarity=0.199 Sum_probs=31.1
Q ss_pred HhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeCCcc
Q 012484 23 LEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKV 60 (462)
Q Consensus 23 L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~d~v 60 (462)
|++++|+|.|+ ||+|.++++.|+..|. ++.++|.+.-
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~ 44 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAE 44 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChh
Confidence 67788999985 8899999999999998 6888876543
No 482
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=78.60 E-value=2 Score=39.51 Aligned_cols=35 Identities=11% Similarity=0.179 Sum_probs=29.7
Q ss_pred HHhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 22 ALEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 22 ~L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
.|++++|+|.|. ||+|.++++.|+..|. ++.++|.
T Consensus 9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 44 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREAAMTYARYGA-TVILLGR 44 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 577889999985 7899999999999998 5777763
No 483
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=78.58 E-value=2.8 Score=40.11 Aligned_cols=33 Identities=18% Similarity=0.304 Sum_probs=21.5
Q ss_pred hcCcEEEEcCChhHHHHHHHHHH-hCCCeEEEEeCC
Q 012484 24 EKASVCLLNCGPTGSETLKNLVL-GGIGSITVIDGS 58 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl-~Gv~~itlvD~d 58 (462)
...+|+.+|||. |.- +..|+. .+..+++.+|-+
T Consensus 95 ~~~~VLdiG~G~-G~~-~~~l~~~~~~~~v~~vDid 128 (304)
T 2o07_A 95 NPRKVLIIGGGD-GGV-LREVVKHPSVESVVQCEID 128 (304)
T ss_dssp SCCEEEEEECTT-SHH-HHHHTTCTTCCEEEEEESC
T ss_pred CCCEEEEECCCc-hHH-HHHHHHcCCCCEEEEEECC
Confidence 357899999874 322 233333 467899999844
No 484
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=78.49 E-value=1.9 Score=43.75 Aligned_cols=34 Identities=18% Similarity=0.291 Sum_probs=30.8
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
..+|+|||.|..|..+|..|.+.|. +++|+|.+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~-~V~lie~~~ 37 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGA-QVTLIERGT 37 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCC
Confidence 4689999999999999999999997 799999763
No 485
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=78.44 E-value=2.1 Score=42.70 Aligned_cols=34 Identities=24% Similarity=0.355 Sum_probs=31.0
Q ss_pred CcEEEEcCChhHHHHHHHHHHhCCC-eEEEEeCCc
Q 012484 26 ASVCLLNCGPTGSETLKNLVLGGIG-SITVIDGSK 59 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl~Gv~-~itlvD~d~ 59 (462)
.+|+|||.|..|..+|..|.+.|.. +++++|...
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~ 37 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEP 37 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCC
Confidence 5899999999999999999999984 799999765
No 486
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=78.37 E-value=3.4 Score=40.44 Aligned_cols=34 Identities=12% Similarity=0.094 Sum_probs=25.0
Q ss_pred cCcEEEEcCChhHHH-HHHHHHHh-CCCeEEEEeCC
Q 012484 25 KASVCLLNCGPTGSE-TLKNLVLG-GIGSITVIDGS 58 (462)
Q Consensus 25 ~~~VlivG~g~lG~e-iaknLvl~-Gv~~itlvD~d 58 (462)
.-+|.|||+|.+|.. .+..|... |+.=+.++|.+
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~ 40 (362)
T 3fhl_A 5 IIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERS 40 (362)
T ss_dssp CEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSS
T ss_pred ceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCC
Confidence 458999999999986 77777654 55444566655
No 487
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=78.36 E-value=1.4 Score=45.66 Aligned_cols=34 Identities=21% Similarity=0.320 Sum_probs=30.4
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
...|+|||.|..|..+|..|.+.|+ +++|+|.+.
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~-~v~viEr~~ 38 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGV-RVLVVERRP 38 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTC-CEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence 3579999999999999999999999 599999764
No 488
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=78.34 E-value=1.6 Score=43.42 Aligned_cols=35 Identities=23% Similarity=0.388 Sum_probs=31.6
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCC-eEEEEeCCc
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIG-SITVIDGSK 59 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~-~itlvD~d~ 59 (462)
..+|+|||.|..|..+|..|.+.|.. +++++|...
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~ 44 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREP 44 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSS
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCC
Confidence 46899999999999999999999984 799999765
No 489
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=78.33 E-value=1.3 Score=44.84 Aligned_cols=34 Identities=26% Similarity=0.387 Sum_probs=30.5
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
...|+|||+|..|+.+|..|++.|+ +++|+|...
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~-~V~vlE~~~ 39 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGL-KILLVDSKP 39 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSC-CEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCC
Confidence 4689999999999999999999998 599999754
No 490
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=78.22 E-value=4.3 Score=39.56 Aligned_cols=93 Identities=12% Similarity=0.092 Sum_probs=52.3
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHh-CCC------eEE-EEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCC
Q 012484 22 ALEKASVCLLNCGPTGSETLKNLVLG-GIG------SIT-VIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELND 93 (462)
Q Consensus 22 ~L~~~~VlivG~g~lG~eiaknLvl~-Gv~------~it-lvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp 93 (462)
.|++-+|.|||+|.+|..-++.+... ++. .++ ++|. ...|++.+++.+ +
T Consensus 3 ~M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~-------------------~~~~a~~~a~~~----g 59 (390)
T 4h3v_A 3 AMTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGR-------------------DAEAVRAAAGKL----G 59 (390)
T ss_dssp -CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECS-------------------SHHHHHHHHHHH----T
T ss_pred CCCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcC-------------------CHHHHHHHHHHc----C
Confidence 56677999999999998877777643 221 222 3332 123555444433 2
Q ss_pred CCeEEEEecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEE
Q 012484 94 AVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLI 146 (462)
Q Consensus 94 ~v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i 146 (462)
... +. .+.+++.+. .+.|+|+.++.+ .....+...|.+.|+.++
T Consensus 60 ~~~--~~-~d~~~ll~~-----~~iDaV~I~tP~-~~H~~~~~~al~aGkhVl 103 (390)
T 4h3v_A 60 WST--TE-TDWRTLLER-----DDVQLVDVCTPG-DSHAEIAIAALEAGKHVL 103 (390)
T ss_dssp CSE--EE-SCHHHHTTC-----TTCSEEEECSCG-GGHHHHHHHHHHTTCEEE
T ss_pred CCc--cc-CCHHHHhcC-----CCCCEEEEeCCh-HHHHHHHHHHHHcCCCce
Confidence 212 12 233444322 257888877754 445566667777777643
No 491
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=78.14 E-value=1.6 Score=44.85 Aligned_cols=34 Identities=32% Similarity=0.563 Sum_probs=30.5
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCC
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 58 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d 58 (462)
....|+|||+|..|..+|..|.+.|+. ++|+|..
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~-v~vlE~~ 44 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVD-VMVLEQL 44 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCC-EEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCC-EEEEECC
Confidence 567899999999999999999999995 8899864
No 492
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=78.13 E-value=14 Score=37.39 Aligned_cols=97 Identities=7% Similarity=0.078 Sum_probs=55.8
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHh-CCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHH-H------------
Q 012484 24 EKASVCLLNCGPTGSETLKNLVLG-GIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFL-Q------------ 89 (462)
Q Consensus 24 ~~~~VlivG~g~lG~eiaknLvl~-Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l-~------------ 89 (462)
+.-+|.|||+|.+|...++.+... |+.=..++|.+ ..|++.+++.+ .
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~-------------------~era~~~a~~~yG~~~~~~~~~~~~ 82 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSARR-------------------LPNTFKAIRTAYGDEENAREATTES 82 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSS-------------------THHHHHHHHHHHSSSTTEEECSSHH
T ss_pred CceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCC-------------------HHHHHHHHHHhcCCccccccccchh
Confidence 346899999999999999887642 33333334322 22444333222 1
Q ss_pred ---H-h-CCCCeEEEEecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEEE
Q 012484 90 ---E-L-NDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIF 147 (462)
Q Consensus 90 ---~-l-Np~v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~ 147 (462)
+ + .+. +. ...+.+++.+. .+.|+|+.++.+......+...|-++|+.++.
T Consensus 83 ~i~~a~~~g~--~~-v~~D~eeLL~d-----~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~ 137 (446)
T 3upl_A 83 AMTRAIEAGK--IA-VTDDNDLILSN-----PLIDVIIDATGIPEVGAETGIAAIRNGKHLVM 137 (446)
T ss_dssp HHHHHHHTTC--EE-EESCHHHHHTC-----TTCCEEEECSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred hhhhhhccCC--ce-EECCHHHHhcC-----CCCCEEEEcCCChHHHHHHHHHHHHcCCcEEe
Confidence 0 0 011 12 22233343321 25899998886655556777788899998774
No 493
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=78.06 E-value=1.8 Score=45.36 Aligned_cols=34 Identities=24% Similarity=0.393 Sum_probs=29.4
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCCCeEEEEeCCc
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 59 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv~~itlvD~d~ 59 (462)
...|+|||+|..|..+|..|++.|+ +++|+|...
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~-~V~VlEr~~ 82 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGV-GALVLEKLV 82 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTC-CEEEEBSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence 4589999999999999999999999 599999653
No 494
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=77.85 E-value=7.2 Score=37.64 Aligned_cols=95 Identities=18% Similarity=0.131 Sum_probs=53.3
Q ss_pred HHHHhcCcEEEEcCC-hhHHHHHHHHHHh--CCCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCe
Q 012484 20 QAALEKASVCLLNCG-PTGSETLKNLVLG--GIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVK 96 (462)
Q Consensus 20 q~~L~~~~VlivG~g-~lG~eiaknLvl~--Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~ 96 (462)
++.-..-+|.|||+| ..|...+..|... ++.=+.++|.+ ..|++.+++.+. ...
T Consensus 13 ~~~~~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~-------------------~~~~~~~a~~~~----~~~ 69 (340)
T 1zh8_A 13 MKPLRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRT-------------------RSHAEEFAKMVG----NPA 69 (340)
T ss_dssp ---CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSS-------------------HHHHHHHHHHHS----SCE
T ss_pred cCCCCceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCC-------------------HHHHHHHHHHhC----CCc
Confidence 344455689999999 7899999998875 33333455522 234544444331 112
Q ss_pred EEEEecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCceEE
Q 012484 97 AKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLI 146 (462)
Q Consensus 97 v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i 146 (462)
.. .+.+++.+. .+.|+|+.++.+ .....+...|.+.|++++
T Consensus 70 --~~-~~~~~ll~~-----~~vD~V~i~tp~-~~H~~~~~~al~aGkhVl 110 (340)
T 1zh8_A 70 --VF-DSYEELLES-----GLVDAVDLTLPV-ELNLPFIEKALRKGVHVI 110 (340)
T ss_dssp --EE-SCHHHHHHS-----SCCSEEEECCCG-GGHHHHHHHHHHTTCEEE
T ss_pred --cc-CCHHHHhcC-----CCCCEEEEeCCc-hHHHHHHHHHHHCCCcEE
Confidence 22 233343321 257888887754 444556666777777643
No 495
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=77.81 E-value=2.2 Score=38.71 Aligned_cols=33 Identities=18% Similarity=0.257 Sum_probs=28.2
Q ss_pred HhcCcEEEEcC-ChhHHHHHHHHHHhCCCeEEEEe
Q 012484 23 LEKASVCLLNC-GPTGSETLKNLVLGGIGSITVID 56 (462)
Q Consensus 23 L~~~~VlivG~-g~lG~eiaknLvl~Gv~~itlvD 56 (462)
|++++|+|.|+ |++|.++++.|+..|. ++.++|
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~ 38 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVS 38 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe
Confidence 56788999986 8999999999999997 577765
No 496
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=77.80 E-value=1.4 Score=42.39 Aligned_cols=32 Identities=31% Similarity=0.345 Sum_probs=29.0
Q ss_pred CcEEEEcCChhHHHHHHHHHH---hCCCeEEEEeCC
Q 012484 26 ASVCLLNCGPTGSETLKNLVL---GGIGSITVIDGS 58 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl---~Gv~~itlvD~d 58 (462)
.+|+|||.|..|..+|..|.+ .|+ +++|+|..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~-~V~v~Ek~ 36 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPL-YLAVWDKA 36 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCE-EEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCc-eEEEEECC
Confidence 379999999999999999999 887 79999965
No 497
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=77.74 E-value=1.4 Score=41.35 Aligned_cols=36 Identities=11% Similarity=0.078 Sum_probs=29.6
Q ss_pred HHHhcCcEEEEcC---ChhHHHHHHHHHHhCCCeEEEEeC
Q 012484 21 AALEKASVCLLNC---GPTGSETLKNLVLGGIGSITVIDG 57 (462)
Q Consensus 21 ~~L~~~~VlivG~---g~lG~eiaknLvl~Gv~~itlvD~ 57 (462)
..|.+++|+|.|+ ||+|.++++.|+..|. +++++|.
T Consensus 17 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r 55 (285)
T 2p91_A 17 GLLEGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYA 55 (285)
T ss_dssp CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEES
T ss_pred hccCCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeC
Confidence 3477788999997 5999999999999996 5777763
No 498
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=77.71 E-value=3.2 Score=42.48 Aligned_cols=76 Identities=16% Similarity=0.243 Sum_probs=45.1
Q ss_pred cEEEEcCChhHH--HHHHHHH----HhC-CCeEEEEeCCcccccCCCcccccccccccccHHHHHHHHHHHhCCCCeEEE
Q 012484 27 SVCLLNCGPTGS--ETLKNLV----LGG-IGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKF 99 (462)
Q Consensus 27 ~VlivG~g~lG~--eiaknLv----l~G-v~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lNp~v~v~~ 99 (462)
||.|||+|++|. +++..|+ ++| ...|.|+|-|. ..+ +..+..+.+.....++.++++.
T Consensus 2 KI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~---~rl------------~~~~~~~~~~~~~~~~~~~i~~ 66 (477)
T 3u95_A 2 KISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHE---RRL------------NASYILARKYVEELNSPVKVVK 66 (477)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCH---HHH------------HHHHHHHHHHHHHHTCCCEEEE
T ss_pred EEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCH---HHH------------HHHHHHHHHHHHHcCCCeEEEE
Confidence 699999999873 3444444 344 35799998332 101 0112234445566777888776
Q ss_pred EecChhhhhcCCcCCCCCCcEEEEcC
Q 012484 100 IEEYPEALIEMNPPFFSQFTLVVATQ 125 (462)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~dvVi~~~ 125 (462)
.+. .. +-++++|+||.+.
T Consensus 67 t~d-~~-------eAl~gAD~Vi~~~ 84 (477)
T 3u95_A 67 TES-LD-------EAIEGADFIINTA 84 (477)
T ss_dssp ESC-HH-------HHHTTCSEEEECC
T ss_pred eCC-HH-------HHhCCCCEEEECc
Confidence 432 11 2356899999875
No 499
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=77.71 E-value=2 Score=43.65 Aligned_cols=33 Identities=18% Similarity=0.477 Sum_probs=29.8
Q ss_pred CcEEEEcCChhHHHHHHHHHH---hCCC--eEEEEeCC
Q 012484 26 ASVCLLNCGPTGSETLKNLVL---GGIG--SITVIDGS 58 (462)
Q Consensus 26 ~~VlivG~g~lG~eiaknLvl---~Gv~--~itlvD~d 58 (462)
.+|+|||+|..|..+|+.|.+ .|.. +++++|..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~ 40 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQ 40 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcC
Confidence 589999999999999999999 9986 39999964
No 500
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=77.69 E-value=2 Score=43.59 Aligned_cols=35 Identities=14% Similarity=0.141 Sum_probs=29.5
Q ss_pred cCcEEEEcCChhHHHHHHHHHHhCC-CeEEEEeCCc
Q 012484 25 KASVCLLNCGPTGSETLKNLVLGGI-GSITVIDGSK 59 (462)
Q Consensus 25 ~~~VlivG~g~lG~eiaknLvl~Gv-~~itlvD~d~ 59 (462)
..+|+|||.|..|..+|..|.+.+. .+++|+|.+.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~ 38 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQAS 38 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 4689999999999999999999943 4899999754
Done!