Query 012487
Match_columns 462
No_of_seqs 263 out of 2004
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 03:09:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012487.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012487hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02782 Branched-chain amino 100.0 2.1E-84 4.6E-89 674.7 41.1 337 126-462 63-403 (403)
2 PLN02883 Branched-chain amino 100.0 4.4E-84 9.6E-89 668.2 38.4 338 124-461 43-383 (384)
3 PLN02259 branched-chain-amino- 100.0 4.4E-83 9.5E-88 662.0 37.0 338 125-462 48-388 (388)
4 KOG0975 Branched chain aminotr 100.0 1.6E-82 3.5E-87 636.7 27.3 330 127-459 39-378 (379)
5 PLN03117 Branched-chain-amino- 100.0 7E-74 1.5E-78 588.6 39.7 335 128-462 15-351 (355)
6 PRK13357 branched-chain amino 100.0 9.1E-65 2E-69 521.5 38.6 332 130-462 14-356 (356)
7 TIGR01123 ilvE_II branched-cha 100.0 9.9E-59 2.1E-63 468.7 34.0 303 159-461 1-313 (313)
8 TIGR01122 ilvE_I branched-chai 100.0 9.7E-58 2.1E-62 458.2 32.8 289 159-461 1-298 (298)
9 PRK06606 branched-chain amino 100.0 6E-56 1.3E-60 447.1 33.3 291 157-461 8-306 (306)
10 COG0115 IlvE Branched-chain am 100.0 1.6E-53 3.4E-58 425.5 31.4 276 156-451 2-284 (284)
11 cd01557 BCAT_beta_family BCAT_ 100.0 6.2E-53 1.3E-57 420.2 32.4 274 171-449 1-279 (279)
12 PRK12479 branched-chain amino 100.0 8.9E-53 1.9E-57 422.9 32.0 276 156-450 4-287 (299)
13 PRK07544 branched-chain amino 100.0 1.9E-52 4.2E-57 418.8 30.4 274 156-451 9-290 (292)
14 PRK08320 branched-chain amino 100.0 6.9E-52 1.5E-56 413.8 32.2 273 157-448 4-284 (288)
15 PRK13356 aminotransferase; Pro 100.0 8.2E-52 1.8E-56 413.2 32.3 271 157-447 8-282 (286)
16 cd01558 D-AAT_like D-Alanine a 100.0 2.7E-51 5.8E-56 405.3 29.9 263 159-443 1-270 (270)
17 PRK07650 4-amino-4-deoxychoris 100.0 5.3E-51 1.2E-55 406.6 32.0 271 158-448 2-276 (283)
18 PRK06680 D-amino acid aminotra 100.0 2.5E-50 5.3E-55 402.7 32.3 270 157-449 4-283 (286)
19 TIGR01121 D_amino_aminoT D-ami 100.0 6.1E-50 1.3E-54 397.8 31.9 265 158-445 2-273 (276)
20 PRK12400 D-amino acid aminotra 100.0 9.7E-50 2.1E-54 399.2 32.4 267 157-445 6-280 (290)
21 PLN02845 Branched-chain-amino- 100.0 9.7E-50 2.1E-54 407.2 32.5 272 157-449 42-324 (336)
22 PRK07849 4-amino-4-deoxychoris 100.0 2.1E-49 4.7E-54 397.3 31.9 265 157-445 8-286 (292)
23 TIGR03461 pabC_Proteo aminodeo 100.0 4.3E-49 9.2E-54 388.0 30.5 254 159-440 1-260 (261)
24 PRK06092 4-amino-4-deoxychoris 100.0 6.5E-49 1.4E-53 388.4 31.2 260 158-445 2-267 (268)
25 cd00449 PLPDE_IV PyridoxaL 5'- 100.0 1.8E-48 3.8E-53 381.2 30.4 250 176-443 1-256 (256)
26 cd01559 ADCL_like ADCL_like: 4 100.0 1.6E-48 3.4E-53 381.8 29.0 246 176-443 1-249 (249)
27 PRK09266 hypothetical protein; 100.0 1E-46 2.2E-51 372.8 28.5 256 157-445 4-260 (266)
28 PF01063 Aminotran_4: Aminotra 100.0 1.8E-38 4E-43 305.1 23.4 224 202-443 1-231 (231)
29 PRK07546 hypothetical protein; 100.0 4.1E-36 8.8E-41 287.5 24.4 204 183-419 4-209 (209)
30 PRK07101 hypothetical protein; 100.0 3.1E-28 6.6E-33 229.8 21.4 183 183-413 3-187 (187)
31 PF15507 DUF4649: Domain of un 66.5 9.1 0.0002 31.0 3.8 54 389-442 11-66 (72)
32 PF03698 UPF0180: Uncharacteri 35.8 1E+02 0.0023 25.5 5.5 67 376-443 12-79 (80)
33 PRK03094 hypothetical protein; 30.6 1.6E+02 0.0036 24.4 5.8 66 377-443 13-79 (80)
34 PF13051 DUF3912: Protein of u 23.5 71 0.0015 24.8 2.3 39 347-385 30-68 (68)
No 1
>PLN02782 Branched-chain amino acid aminotransferase
Probab=100.00 E-value=2.1e-84 Score=674.69 Aligned_cols=337 Identities=66% Similarity=1.132 Sum_probs=319.6
Q ss_pred ChhhccCCCCCCCCccceeeCceEEEEEccCceeecCeeccCCcceeCCCCccccccceEEEEEEEEEeCCCeEeecChH
Q 012487 126 VVEEYANLKWDELGFCLIPVDYMYVMKCSKEKNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPE 205 (462)
Q Consensus 126 ~~~~~~~~d~~~l~fg~~~tdhm~~~~~~~~~~W~ng~ivp~~~~~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr~d 205 (462)
..++..++||++||||+++||||++++|+++++|.||+|+|++++.|+|.|++||||||||||||+|++.||++++|||+
T Consensus 63 ~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~~w~ng~ivp~~~~~i~~~d~gl~YGdgvFEg~kayr~~~G~i~lFr~d 142 (403)
T PLN02782 63 EVTELADIDWDNLGFGLVPTDYMYIMKCNRDGEFSKGELQRFGNIELSPSAGVLNYGQGLFEGLKAYRKEDGNILLFRPE 142 (403)
T ss_pred CCcccccCCccccCCCccccCceEEEEECCCCcEeCCEEEECCCCEeChhhhHHhhhhhhhheEEEEEcCCCcEeeeChH
Confidence 34455689999999999999999999998888899999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHcCCcCCCCCCcceEEEEEEeccCCcccccCCCCcEEEEEEeccCCCC
Q 012487 206 QNALRMQMGADRLRMPSPTIEQFVDAVKHTVVANKQWVPPPGKGSLYIRPLLMGSGPVLGATPAPDYTFLAFASPVGNYH 285 (462)
Q Consensus 206 ~Hl~RL~~SA~~L~mp~~~~e~l~~~I~~lv~~n~~~vP~~~~g~lyIRp~~~g~~~~lGv~p~~~~~~~I~~~P~~~y~ 285 (462)
+|++||++||++|+||.++.++|+++|+++++.|+.|||+.+.+++||||+++|+++.+|+.++.+++++|+++|+++|+
T Consensus 143 ~H~~RL~~SA~rL~lp~~~~e~l~~~i~~lv~~n~~~vP~~~~~~lyiRp~v~g~~~~lG~~~~~~~~~~i~~~p~~~~~ 222 (403)
T PLN02782 143 ENAIRMRNGAERMCMPAPTVEQFVEAVKETVLANKRWVPPPGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYF 222 (403)
T ss_pred HHHHHHHHHHHHhCcCCCCHHHHHHHHHHHHHhccccCCCCCCccEEEEEEEEecCCCcCcCCCCCcEEEEEEEECcccc
Confidence 99999999999999999999999999999999999999998778999999999988889999888899999999999887
Q ss_pred C---CceeEEEeeeeeecCCCCCCCCCcccccccchHHHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEEeCCEEEcc
Q 012487 286 K---GYLNLVVEEKFYRAFPGGTGGVKAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTP 362 (462)
Q Consensus 286 ~---~~v~l~i~~~~~Ra~p~g~g~~Kt~gNYa~~l~a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v~~~~liTP 362 (462)
+ +++++.+++++.|++|++++++|++|||+++++++++|+++||+|+||||..++|+|+|++++|||++++++|+||
T Consensus 223 ~~g~~~v~l~v~~~~~Ra~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~Ld~~~~g~V~E~~~sNlF~v~~~~l~TP 302 (403)
T PLN02782 223 KEGVAPINLIVENEFHRATPGGTGGVKTIGNYAAVLKAQSIAKAKGYSDVLYLDCVHKKYLEEVSSCNIFIVKDNVISTP 302 (403)
T ss_pred ccCCccEEEEEeCceeecCCCCCcccchhhhHHHHHHHHHHHHHcCCCEEEEEeCCCCCEEEEcCcEEEEEEECCEEEcC
Confidence 5 5788988877899999999999999999999999999999999999999965579999999999999999999999
Q ss_pred CCCCCCccchHHHHHHHHHHHcCCcEEEEEeChhhhhccceeEEEecccceEEeEEEEECCeEEEcC-CCchHHHHHHHH
Q 012487 363 ATDGTILPGITRKSVIEIAQILGYQVEERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYK-TGPETVAQKLYE 441 (462)
Q Consensus 363 pLs~~ILpGITR~siLela~~~G~~V~Er~I~~~eL~~adEvF~tgTa~gI~PV~~I~~~~~~i~~~-~~~gp~t~~L~~ 441 (462)
+++++||+||||++||++|+++|++|+||+|+++||.+|||+|+|||+++|+||++|.|+|+.+.+. +..||++++|++
T Consensus 303 ~l~~~iLpGITR~svlela~~~Gi~V~Er~i~~~eL~~AdEvF~tgTa~~V~PV~~I~~~g~~~~~~~g~~Gpvt~~L~~ 382 (403)
T PLN02782 303 AIKGTILPGITRKSIIDVARSQGFQVEERNVTVDELLEADEVFCTGTAVVVSPVGSITYKGKRVSYGEGGFGTVSQQLYT 382 (403)
T ss_pred CCcCCcCcCHHHHHHHHHHHHcCCeEEEEECCHHHHhhCCEEEEccCcceEEEEEEEEECCEEEeCCCCCcCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999988663 458999999999
Q ss_pred HHHHhhccCCCCCCCCeEECC
Q 012487 442 MLVGIQTGRIEDKMGWTVELN 462 (462)
Q Consensus 442 ~l~~iq~G~~~d~~gW~~~v~ 462 (462)
+|.+||+|+.+|++||+++|+
T Consensus 383 ~l~~iq~G~~~~~~~W~~~v~ 403 (403)
T PLN02782 383 VLTSLQMGLIEDNMNWTVELS 403 (403)
T ss_pred HHHHHhcCCCCCCCCCeEECC
Confidence 999999999999999999986
No 2
>PLN02883 Branched-chain amino acid aminotransferase
Probab=100.00 E-value=4.4e-84 Score=668.21 Aligned_cols=338 Identities=60% Similarity=1.026 Sum_probs=318.7
Q ss_pred CCChhhccCCCCCCCCccceeeCceEEEEEccCceeecCeeccCCcceeCCCCccccccceEEEEEEEEEeCCCeEeecC
Q 012487 124 SDVVEEYANLKWDELGFCLIPVDYMYVMKCSKEKNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFR 203 (462)
Q Consensus 124 ~~~~~~~~~~d~~~l~fg~~~tdhm~~~~~~~~~~W~ng~ivp~~~~~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr 203 (462)
....+..+++||++||||.+|||||++++|.++++|.+++|+|++++.|+|++++||||||||||||+|++.||++++||
T Consensus 43 ~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~~w~~~~i~p~~~l~l~p~a~~l~YGdgvFEg~kayr~~dG~i~lfr 122 (384)
T PLN02883 43 EREDEEYADVDWDKLGFSLVRTDFMFATKSCRDGNFEQGYLSRYGNIELNPAAGILNYGQGLIEGMKAYRGEDGRILLFR 122 (384)
T ss_pred cccccccccCCchhcCcCCeecCceEEEEEcCCCcccCCeEeeCCCcccCccccHhhcceeeeeeEEEEECCCCCEeeeC
Confidence 35567778999999999999999999999998889999999999999999999999999999999999999999999999
Q ss_pred hHhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHcCCcCCCCCCcceEEEEEEeccCCcccccCCCCcEEEEEEeccCC
Q 012487 204 PEQNALRMQMGADRLRMPSPTIEQFVDAVKHTVVANKQWVPPPGKGSLYIRPLLMGSGPVLGATPAPDYTFLAFASPVGN 283 (462)
Q Consensus 204 ~d~Hl~RL~~SA~~L~mp~~~~e~l~~~I~~lv~~n~~~vP~~~~g~lyIRp~~~g~~~~lGv~p~~~~~~~I~~~P~~~ 283 (462)
+++|++||++||++|+||.++.++|.++|+++++.|..|||+.+.+++||||+++++++.+|+.++.+++|+|+++|+++
T Consensus 123 ~~~h~~RL~~SA~rL~lp~~~~e~~~~~i~~lv~~n~~wvp~~~~~~lYIRp~v~~~~~~lG~~~~~~~~~~i~~~p~~~ 202 (384)
T PLN02883 123 PELNAMRMKIGAERMCMHSPSVHQFIEGVKQTVLANRRWVPPPGKGSLYLRPLLFGSGASLGVAAAPEYTFLVFGSPVQN 202 (384)
T ss_pred hhHHHHHHHHHHHHhCCCCcCHHHHHHHHHHHHHhccccCCCCCCceEEEEEEEEecCCccCCCCCCCeEEEEEEEeccc
Confidence 99999999999999999999999999999999999999999887779999999999888899998888999999999999
Q ss_pred CCC---CceeEEEeeeeeecCCCCCCCCCcccccccchHHHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEEeCCEEE
Q 012487 284 YHK---GYLNLVVEEKFYRAFPGGTGGVKAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVIS 360 (462)
Q Consensus 284 y~~---~~v~l~i~~~~~Ra~p~g~g~~Kt~gNYa~~l~a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v~~~~li 360 (462)
|++ +++++.+++.+.|++|++++++|++|||+++++++++|+++||||+||||..++|+|+|+++||||++++++|+
T Consensus 203 y~~~g~~~v~l~~~~~~~Ra~~~g~g~~K~~~nYa~~lla~~eA~~~G~de~L~Ld~~~~~~V~E~~~sNlF~v~~~~l~ 282 (384)
T PLN02883 203 YFKEGTAALNLYVEEVIPRAYLGGTGGVKAISNYGPVLEVMRRAKSRGFSDVLYLDADTGKNIEEVSAANIFLVKGNIIV 282 (384)
T ss_pred ccccCcceEEEEECccccccCCCCCcccchhhhHHHHHHHHHHHHHCCCCEEEEEeCCCCCEEEEcCcEEEEEEECCEEE
Confidence 875 47888888878999999999999999999999999999999999999999755579999999999999999999
Q ss_pred ccCCCCCCccchHHHHHHHHHHHcCCcEEEEEeChhhhhccceeEEEecccceEEeEEEEECCeEEEcCCCchHHHHHHH
Q 012487 361 TPATDGTILPGITRKSVIEIAQILGYQVEERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLY 440 (462)
Q Consensus 361 TPpLs~~ILpGITR~siLela~~~G~~V~Er~I~~~eL~~adEvF~tgTa~gI~PV~~I~~~~~~i~~~~~~gp~t~~L~ 440 (462)
||+++++||+||||++||++|+++|++|+||+|+++||.+|||+|+|||+++|+||++|+++++.+.+....||++++|+
T Consensus 283 TP~l~~~iLpGITR~svl~la~~~G~~V~Er~i~~~eL~~AdEvF~tgTa~~I~PV~~I~~~~~~~~~~~~~G~vt~~L~ 362 (384)
T PLN02883 283 TPATSGTILGGITRKSIIEIALDLGYKVEERRVPVEELKEAEEVFCTGTAAGVASVGSITFKNTRTEYKVGDGIVTQQLR 362 (384)
T ss_pred eCCCcCCcCcCHHHHHHHHHHHHCCCeEEEEECCHHHHHhCCEeeeccChhheEEEEEEeccCceeecccCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999987776533333589999999
Q ss_pred HHHHHhhccCCCCCCCCeEEC
Q 012487 441 EMLVGIQTGRIEDKMGWTVEL 461 (462)
Q Consensus 441 ~~l~~iq~G~~~d~~gW~~~v 461 (462)
++|.+||+|+++|++||+++|
T Consensus 363 ~~l~~iq~G~~~d~~~W~~~~ 383 (384)
T PLN02883 363 SILLGIQTGSIQDTKDWVLQI 383 (384)
T ss_pred HHHHHHHcCCCCCCCCCeEeC
Confidence 999999999999999999987
No 3
>PLN02259 branched-chain-amino-acid aminotransferase 2
Probab=100.00 E-value=4.4e-83 Score=661.97 Aligned_cols=338 Identities=62% Similarity=1.105 Sum_probs=319.7
Q ss_pred CChhhccCCCCCCCCccceeeCceEEEEEccCceeecCeeccCCcceeCCCCccccccceEEEEEEEEEeCCCeEeecCh
Q 012487 125 DVVEEYANLKWDELGFCLIPVDYMYVMKCSKEKNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRP 204 (462)
Q Consensus 125 ~~~~~~~~~d~~~l~fg~~~tdhm~~~~~~~~~~W~ng~ivp~~~~~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr~ 204 (462)
...++.+++||++||||.+|||||++++|+++++|.||+|+|++++.|+|.|++||||||||||||+|+..||++++||+
T Consensus 48 ~~~~~~~~~~~~~l~f~~~~td~m~~~~~~~~~~w~~g~ivp~~~~~i~~~drgl~YGdgvFEglkayr~~~G~i~lfr~ 127 (388)
T PLN02259 48 NGDDVYADLDWDNLGFGLNPADYMYVMKCSKDGEFTQGELSPYGNIQLSPSAGVLNYGQAIYEGTKAYRKENGKLLLFRP 127 (388)
T ss_pred ccccccccCCccccCCCCcccCceEEEEECCCCeEECCEEeEchhCeeCchhhHHHhhhhhhhcEEEEECCCCeEeecCc
Confidence 55667789999999999999999999999888899999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHcCCcCCCCCCcceEEEEEEeccCCcccccCCCCcEEEEEEeccCCC
Q 012487 205 EQNALRMQMGADRLRMPSPTIEQFVDAVKHTVVANKQWVPPPGKGSLYIRPLLMGSGPVLGATPAPDYTFLAFASPVGNY 284 (462)
Q Consensus 205 d~Hl~RL~~SA~~L~mp~~~~e~l~~~I~~lv~~n~~~vP~~~~g~lyIRp~~~g~~~~lGv~p~~~~~~~I~~~P~~~y 284 (462)
++|++||++||++|+||.++.++|.++|.++++.|..|||+.+.+.+||||+++|+++.+|+.|+.+++++|+++|+++|
T Consensus 128 ~~h~~RL~~SA~rL~lp~~~~e~~~~~i~~lv~~n~~~vp~~~~~~lyiRp~v~g~~~~lG~~p~~~~~~~i~~~p~~~~ 207 (388)
T PLN02259 128 DHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALANKRWVPPAGKGTLYIRPLLMGSGPILGLGPAPEYTFIVYASPVGNY 207 (388)
T ss_pred HHHHHHHHHhHHHhCCCCcCHHHHHHHHHHHHHhccccCCCCCCceEEEEEEEEecCCccCcCCCCCcEEEEEEEechhh
Confidence 99999999999999999999999999999999999999998877799999999998888999988889999999999998
Q ss_pred CCC---ceeEEEeeeeeecCCCCCCCCCcccccccchHHHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEEeCCEEEc
Q 012487 285 HKG---YLNLVVEEKFYRAFPGGTGGVKAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVIST 361 (462)
Q Consensus 285 ~~~---~v~l~i~~~~~Ra~p~g~g~~Kt~gNYa~~l~a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v~~~~liT 361 (462)
+++ ++++.+++++.|++|++++++|+++||+++++++++|+++||||+||||..++|+|+|+++||||++++++|+|
T Consensus 208 ~~~g~~~i~l~v~~~~~Ra~p~~~g~~K~~~NY~~~l~a~~eA~~~G~de~L~Ld~~~~g~V~E~~~sNlF~v~~~~l~T 287 (388)
T PLN02259 208 FKEGMAALNLYVEEEYVRAAPGGAGGVKSITNYAPVLKALSRAKSRGFSDVLYLDSVKKKYLEEASSCNVFVVKGRTIST 287 (388)
T ss_pred hhcCcceEEEEeecceeccCCCCCcccchhhhHHHHHHHHHHHHHcCCCEEEEecCCCCCEEEEcCcEEEEEEECCEEEc
Confidence 763 56687777789999999999999889999999999999999999999997568999999999999999999999
Q ss_pred cCCCCCCccchHHHHHHHHHHHcCCcEEEEEeChhhhhccceeEEEecccceEEeEEEEECCeEEEcCCCchHHHHHHHH
Q 012487 362 PATDGTILPGITRKSVIEIAQILGYQVEERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLYE 441 (462)
Q Consensus 362 PpLs~~ILpGITR~siLela~~~G~~V~Er~I~~~eL~~adEvF~tgTa~gI~PV~~I~~~~~~i~~~~~~gp~t~~L~~ 441 (462)
|+++++||+||||++||++|+++|++|+||+|+++||.+|||+|+|||+++|+||++|+++++.+.++++.||++++|++
T Consensus 288 P~l~~~iL~GITR~sIl~la~~~G~~V~Er~i~~~eL~~AdEvF~tgTa~~V~PV~~I~~~~~~~~~~~~~g~~t~~L~~ 367 (388)
T PLN02259 288 PATNGTILEGITRKSVMEIASDQGYQVVEKAVHVDEVMDADEVFCTGTAVVVAPVGTITYQEKRVEYKTGDESVCQKLRS 367 (388)
T ss_pred CCCcCCcCcCHHHHHHHHHHHHCCCeEEEEECCHHHHHhCCEEEEcCCcceEEEEEEEecCCceEEeCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888887666556899999999
Q ss_pred HHHHhhccCCCCCCCCeEECC
Q 012487 442 MLVGIQTGRIEDKMGWTVELN 462 (462)
Q Consensus 442 ~l~~iq~G~~~d~~gW~~~v~ 462 (462)
+|.+||+|+++|++||+++||
T Consensus 368 ~l~~iq~G~~~~~~~W~~~~~ 388 (388)
T PLN02259 368 VLVGIQTGLIEDNKGWVTDIN 388 (388)
T ss_pred HHHHHHcCCCCCCCCCeEECC
Confidence 999999999999999999997
No 4
>KOG0975 consensus Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-82 Score=636.69 Aligned_cols=330 Identities=55% Similarity=0.921 Sum_probs=314.6
Q ss_pred hhhccCCCCCCCCccceeeCceEEEEEccCceeecCeeccCCcceeCCCCccccccceEEEEEEEEEeCCCeEeecChHh
Q 012487 127 VEEYANLKWDELGFCLIPVDYMYVMKCSKEKNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQ 206 (462)
Q Consensus 127 ~~~~~~~d~~~l~fg~~~tdhm~~~~~~~~~~W~ng~ivp~~~~~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr~d~ 206 (462)
..+...+||++|+||.+|||||++++|.+++ |..|.|.|++++.+||++.+|||||++||||||||++||+|++|||++
T Consensus 39 ~~k~~~~d~~~L~fg~~~td~m~~~k~~~~g-w~~~~I~p~gni~~~Paa~vlhy~~~lfEG~KAyRt~d~~i~LFrPd~ 117 (379)
T KOG0975|consen 39 DEKPAPIDWDELGFGLVFTDHMLTIKWSEDG-WSQGEISPFGNLSLHPAAKVLHYGQGLFEGLKAYRTEDGKIRLFRPDQ 117 (379)
T ss_pred CCccCcCCHHHhccCCcccceeEEEeccccC-cCCCCccCcCCEeeChhhhceecchhhccccccccCCCCeEEEecchh
Confidence 4556788999999999999999999999555 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHcCCcCCCCCCcceEEEEEEeccCCcccccCCCCcEEEEEEeccCCCCC
Q 012487 207 NALRMQMGADRLRMPSPTIEQFVDAVKHTVVANKQWVPPPGKGSLYIRPLLMGSGPVLGATPAPDYTFLAFASPVGNYHK 286 (462)
Q Consensus 207 Hl~RL~~SA~~L~mp~~~~e~l~~~I~~lv~~n~~~vP~~~~g~lyIRp~~~g~~~~lGv~p~~~~~~~I~~~P~~~y~~ 286 (462)
|+.||++||.|++||.|+.++|.++|++++.+|++|||+.+.++|||||+++|+++.+|+.++.+++|+++++|+++||+
T Consensus 118 N~~Rm~~sA~r~~lP~p~~~e~ie~i~~lv~~~~~wVP~~~~~SLyirp~l~Gt~~~Lgv~~~~e~~l~vi~spvg~yf~ 197 (379)
T KOG0975|consen 118 NMDRMLRSAERACLPSPDVEEFIEAIKQLVLADKEWVPPPGKGSLYIRPLLIGTDPVLGVSPAPEATLFVIVSPVGPYFK 197 (379)
T ss_pred hHHHHHhhhhhccCCCCCHHHHHHHHHHHHHhcCcccCCCCCceEEEeeeeccCCcccccccCCcceEEEEEcccchhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred ---CceeEEEeeeeeecCCCCCCCCCcccccccchHHHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEEeCCE--EEc
Q 012487 287 ---GYLNLVVEEKFYRAFPGGTGGVKAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNV--IST 361 (462)
Q Consensus 287 ---~~v~l~i~~~~~Ra~p~g~g~~Kt~gNYa~~l~a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v~~~~--liT 361 (462)
+|++|.+.+.++|++|+|+|+.|+++||+++++++.||+.+||+|+||||.. ++||+|+++||||++++++ ++|
T Consensus 198 ~g~~~v~L~v~~~~~Ra~pgg~g~~k~~~NY~P~vl~q~eA~~~G~~dvLwL~~d-~~~ItEv~tmNiF~v~~n~~elvT 276 (379)
T KOG0975|consen 198 SGFKGVNLLVDPEFVRAWPGGTGGVKLGGNYAPNVLAQKEAKSKGASDVLWLDGD-GGYITEVGTMNIFMVKKNEDELVT 276 (379)
T ss_pred ccccceEEEEecceeecCCCCCCceeeccccchHHHHHHHHHhcCcceeEEEecC-CCceeeccceeEEEEEcCceeEec
Confidence 7899999999999999999999999999999999999999999999999984 4599999999999999887 999
Q ss_pred cCCCCCCccchHHHHHHHHHHHcC-CcEEEEEeChhhhhccceeEEEecccceEEeEEEEECCeEEE---c-CCCchHHH
Q 012487 362 PATDGTILPGITRKSVIEIAQILG-YQVEERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIE---Y-KTGPETVA 436 (462)
Q Consensus 362 PpLs~~ILpGITR~siLela~~~G-~~V~Er~I~~~eL~~adEvF~tgTa~gI~PV~~I~~~~~~i~---~-~~~~gp~t 436 (462)
|++++.|||||||++|||+|+++| ++|+||.++++||.+|+|+|+||||++|.||+.|.|.+++|. + .++.||++
T Consensus 277 Pp~dg~ILpGvTR~sileLa~~~g~~~V~Er~vtv~e~~~A~Evf~tGTA~~v~pV~~i~~~~~~i~~~~~~~g~~g~l~ 356 (379)
T KOG0975|consen 277 PPLDGTILPGVTRKSILELARDLGEFKVEERDVTVDELKTADEVFCTGTAAVVSPVGSILYKDEKIHIPTIGEGKEGPLA 356 (379)
T ss_pred CCCCCcccCCccHHHHHHHHHHhCceEEEEEEEeHHHhhhhHhhhcccceeeeccccceeecccccceeecCCCCccHHH
Confidence 999999999999999999999999 999999999999999999999999999999999999984432 3 34589999
Q ss_pred HHHHHHHHHhhccCCCCCCCCeE
Q 012487 437 QKLYEMLVGIQTGRIEDKMGWTV 459 (462)
Q Consensus 437 ~~L~~~l~~iq~G~~~d~~gW~~ 459 (462)
++|++.|.+||+|. +|..+|++
T Consensus 357 ~~l~~~l~~iq~g~-~~~~~w~~ 378 (379)
T KOG0975|consen 357 KKLLSTLTDIQYGR-EPKKGWTV 378 (379)
T ss_pred HHHHHHHHHhhcCC-cCCCCccc
Confidence 99999999999999 78889986
No 5
>PLN03117 Branched-chain-amino-acid aminotransferase; Provisional
Probab=100.00 E-value=7e-74 Score=588.59 Aligned_cols=335 Identities=64% Similarity=1.112 Sum_probs=309.3
Q ss_pred hhccCCCCCCCCccceeeCceEEEEEccCceeecCeeccCCcceeCCCCccccccceEEEEEEEEEeCCCeEeecChHhH
Q 012487 128 EEYANLKWDELGFCLIPVDYMYVMKCSKEKNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQN 207 (462)
Q Consensus 128 ~~~~~~d~~~l~fg~~~tdhm~~~~~~~~~~W~ng~ivp~~~~~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr~d~H 207 (462)
.+..++||++||||.+|||||+.++|..+.+|.||+|+|.+++.|++.|++||||||||||||+|+..||++++|++++|
T Consensus 15 ~~~~~~~~~~~~f~~~~~~~m~~~~~~~~~~~~ng~~v~~~~a~i~~~drgl~yGDGvFEtir~y~~~~G~i~lf~l~~H 94 (355)
T PLN03117 15 EKYANVKWEELGFALVPTDYMYVAKCKQGESFSEGKIVPYGDISISPCAGILNYGQGLFEGLKAYRTEDGRITLFRPDQN 94 (355)
T ss_pred ccccccCccccCCCccccCceEEEEcCCCCeEECCEEEEchhceeCcchhhhhhcceeEeeEEEEECCCCcEeeeCcHHH
Confidence 44457999999999999999999999877889999999999999999999999999999999999888999999999999
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHcCCcCCCCCCcceEEEEEEeccCCcccccCCCCcEEEEEEeccCCCCC-
Q 012487 208 ALRMQMGADRLRMPSPTIEQFVDAVKHTVVANKQWVPPPGKGSLYIRPLLMGSGPVLGATPAPDYTFLAFASPVGNYHK- 286 (462)
Q Consensus 208 l~RL~~SA~~L~mp~~~~e~l~~~I~~lv~~n~~~vP~~~~g~lyIRp~~~g~~~~lGv~p~~~~~~~I~~~P~~~y~~- 286 (462)
++||.+||++|+|+.++.+.|++.|.++++.|..|+|+...+.+||||+++|+++.+|+.+..++.+++++.|+++++.
T Consensus 95 l~RL~~Sa~~L~i~~p~~~~l~~~i~~lv~~n~~~i~~~~~~~~yir~~~~g~~~~~g~~~~~~~~~~i~~~p~~~~~~~ 174 (355)
T PLN03117 95 ALRMQTGADRLCMTPPSLEQFVEAVKQTVLANKKWVPPPGKGTLYIRPLLIGSGAVLGVAPAPEYTFLIYASPVGNYHKA 174 (355)
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhccccccCCCCCcEEEEEEEEEecCccCcCCCCCcEEEEEEEeccccccC
Confidence 9999999999999988999999999999999999998766678899999887776778887667888999999877653
Q ss_pred -CceeEEEeeeeeecCCCCCCCCCcccccccchHHHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEEeCCEEEccCCC
Q 012487 287 -GYLNLVVEEKFYRAFPGGTGGVKAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATD 365 (462)
Q Consensus 287 -~~v~l~i~~~~~Ra~p~g~g~~Kt~gNYa~~l~a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v~~~~liTPpLs 365 (462)
+|+++.+++.+.|+.|.+++++|+++||+.+++++++|+++||||+||||..++|+|+|++++|||+++|++|+||+++
T Consensus 175 ~~gi~l~~~~~~~r~~~~~l~~~K~~~nyl~~vla~~eA~~~G~deaL~ld~~~~g~v~E~~~sNlF~v~~~~l~TP~l~ 254 (355)
T PLN03117 175 SSGLNLKVDHKHRRAHSGGTGGVKSCTNYSPVVKSLIEAKSSGFSDVLFLDAATGKNIEELSACNIFILKGNIVSTPPTS 254 (355)
T ss_pred CCCEEEEEcCceEeCCCCCccchhhhhhhHHHHHHHHHHHHCCCCEEEEEeCCCCCEEEEcCcEEEEEEECCEEEeCCCc
Confidence 7899988766788989899999997799999999999999999999999963347999999999999999999999999
Q ss_pred CCCccchHHHHHHHHHHHcCCcEEEEEeChhhhhccceeEEEecccceEEeEEEEECCeEEEcCCCchHHHHHHHHHHHH
Q 012487 366 GTILPGITRKSVIEIAQILGYQVEERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLYEMLVG 445 (462)
Q Consensus 366 ~~ILpGITR~siLela~~~G~~V~Er~I~~~eL~~adEvF~tgTa~gI~PV~~I~~~~~~i~~~~~~gp~t~~L~~~l~~ 445 (462)
.+||+||||+.||++|+++|++|+|+.|+++||.+|||+|+|||+++|+||.+|++.++.+.+....||+|++|+++|.+
T Consensus 255 ~~iL~GItR~~vl~la~~~Gi~v~Er~i~~~eL~~AdEvFltnT~~~I~PV~~i~~~~~~~~~~~~~~~~~~~l~~~~~~ 334 (355)
T PLN03117 255 GTILPGVTRKSISELARDIGYQVEERDVSVDELLEAEEVFCTGTAVVVKAVETVTFHDKKVKYRTGEEALSTKLHLILTN 334 (355)
T ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEEEccHHHHhhCCEEEEccCcceEEEEEEEEecCceEEeCCCCChHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998777776654458999999999999
Q ss_pred hhccCCCCCCCCeEECC
Q 012487 446 IQTGRIEDKMGWTVELN 462 (462)
Q Consensus 446 iq~G~~~d~~gW~~~v~ 462 (462)
||+|+.+|++||+++||
T Consensus 335 ~~~g~~~~~~~W~~~v~ 351 (355)
T PLN03117 335 IQMGVVEDKKGWMVEID 351 (355)
T ss_pred HhCCCCCCCCCCEEEcc
Confidence 99999999999999984
No 6
>PRK13357 branched-chain amino acid aminotransferase; Provisional
Probab=100.00 E-value=9.1e-65 Score=521.46 Aligned_cols=332 Identities=44% Similarity=0.762 Sum_probs=297.7
Q ss_pred ccCCCCCCCCccceeeCceEEEEEccCceeecCeeccCCcceeCCCCccccccceEEEEEEEEEeCCCeEeecChHhHHH
Q 012487 130 YANLKWDELGFCLIPVDYMYVMKCSKEKNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNAL 209 (462)
Q Consensus 130 ~~~~d~~~l~fg~~~tdhm~~~~~~~~~~W~ng~ivp~~~~~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr~d~Hl~ 209 (462)
+..+||+++|||+.++|||++..|.++ .|.||+++|.+++.|++.|++|+||||||||||+|++.+|++++|++++|++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~nG~~vp~~~a~is~~Drg~~yGDGvFEtir~~~~~~G~~~~f~l~~Hl~ 92 (356)
T PRK13357 14 KRAIDWANLGFGYVFTDHMVVIDYKDG-KWHDARLVPYGPLELDPAATVLHYGQEIFEGLKAYRHKDGSIVLFRPDANAK 92 (356)
T ss_pred ccCCCccccCCCccccceeEEEEecCC-cccCCeEeeCCCceeCcccchhhhcceeeeeEEEEEcCCCcEeeeChHHHHH
Confidence 446789999999999999999999875 4999999999999999999999999999999999987789999999999999
Q ss_pred HHHHHHhhcCCCCCCHHHHHHHHHHHHHHcCCcCCC-CCCcceEEEEEEeccCCcccccCCCCcEEEEEEeccCCCCC--
Q 012487 210 RMQMGADRLRMPSPTIEQFVDAVKHTVVANKQWVPP-PGKGSLYIRPLLMGSGPVLGATPAPDYTFLAFASPVGNYHK-- 286 (462)
Q Consensus 210 RL~~SA~~L~mp~~~~e~l~~~I~~lv~~n~~~vP~-~~~g~lyIRp~~~g~~~~lGv~p~~~~~~~I~~~P~~~y~~-- 286 (462)
||.+||++|+|+.++.+.|.+.+.++++.|..++++ ..++.+|||++++++...+|+.+...+.++|++.|.++++.
T Consensus 93 RL~~Sa~~L~i~~~~~~~l~~~i~~li~~n~~~~~~~~~~~~~~ir~~v~rg~~~~g~~~~~~~~~~i~~~~~~~~~~~~ 172 (356)
T PRK13357 93 RLQRSADRLLMPELPEELFLEAVKQLVKADRDWVPPYGEGASLYLRPFMIATEPFLGVKPAEEYIFCVIASPVGAYFKGG 172 (356)
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHHHHHHhcccccCCCCCCccEEEEEEEEccCCcccccCCCccEEEEEEEechhhcccC
Confidence 999999999999778999999999999999876532 22357899999987766678876667889999998776553
Q ss_pred -CceeEEEeeeeeecCCCCCCCCCcccccccchHHHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEEeCCEEEccCCC
Q 012487 287 -GYLNLVVEEKFYRAFPGGTGGVKAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATD 365 (462)
Q Consensus 287 -~~v~l~i~~~~~Ra~p~g~g~~Kt~gNYa~~l~a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v~~~~liTPpLs 365 (462)
+++++.+...+.|..|..++++|+..||+.+++++++|+++||||+||+|..++|+|+|++++|||++++++++|||++
T Consensus 173 ~~~v~l~~~~~~~r~~~~~l~~~Kt~~nyl~~vla~~eA~~~G~deaL~ld~~~~G~V~E~s~sNlF~v~~~~l~TPpl~ 252 (356)
T PRK13357 173 VKPVSIWVSDEYDRAAPGGTGAAKVGGNYAASLLAQAEAKEKGCDQVLYLDAVEHTYIEEVGGMNFFFITKDGTVTPPLS 252 (356)
T ss_pred CCceEEEEcCCeEecCCCCcchhhcccccHHHHHHHHHHHHCCCCEEEEEcCCCCCEEEEcCcEEEEEEECCEEEECCCC
Confidence 5788887756788888888999996699999999999999999999999963479999999999999999999999999
Q ss_pred CCCccchHHHHHHHHHHHcCCcEEEEEeChhh------hhccceeEEEecccceEEeEEEEECCeEEEc-CCCchHHHHH
Q 012487 366 GTILPGITRKSVIEIAQILGYQVEERAVAVEE------LFDSEEVFCTGTAMVVNPVNSITYQGKRIEY-KTGPETVAQK 438 (462)
Q Consensus 366 ~~ILpGITR~siLela~~~G~~V~Er~I~~~e------L~~adEvF~tgTa~gI~PV~~I~~~~~~i~~-~~~~gp~t~~ 438 (462)
.+||+||||+.||++|+++|++|+|++|+++| |.+|||+|+|||+.+|+||.+|++++....+ ++.+||++++
T Consensus 253 ~giL~GItR~~vlela~~~Gi~v~e~~i~~~el~~~~~L~~AdevFltnS~~gi~PV~~id~~~~~~~~~~g~~g~~t~~ 332 (356)
T PRK13357 253 GSILPGITRDSLLQLAEDLGLTVEERPVSIDEWQADAASGEFTEAFACGTAAVITPIGGIKYKDKEFVIGDGEVGPVTQK 332 (356)
T ss_pred CCCCcchHHHHHHHHHHHCCCeEEEEecCHHHhhhhhccCcceEEEEcccccEEEEEEEEEeCCCEEEcCCCCCChHHHH
Confidence 99999999999999999999999999999999 8999999999999999999999764433333 4568999999
Q ss_pred HHHHHHHhhccCCCCCCCCeEECC
Q 012487 439 LYEMLVGIQTGRIEDKMGWTVELN 462 (462)
Q Consensus 439 L~~~l~~iq~G~~~d~~gW~~~v~ 462 (462)
|+++|.+++.|+.++.++|.++||
T Consensus 333 L~~~~~~~~~~~~~~~~~w~~~~~ 356 (356)
T PRK13357 333 LYDELTGIQFGDVEDPHGWIVKVD 356 (356)
T ss_pred HHHHHHHHhcCCCCCCCCCcEeCc
Confidence 999999999999999999999987
No 7
>TIGR01123 ilvE_II branched-chain amino acid aminotransferase, group II. Among the class IV aminotransferases are two phylogenetically separable groups of branched-chain amino acid aminotransferase (IlvE). The last common ancestor of the two lineages appears also to have given rise to a family of D-amino acid aminotransferases (DAAT). This model represents the IlvE family less similar to the DAAT family.
Probab=100.00 E-value=9.9e-59 Score=468.68 Aligned_cols=303 Identities=47% Similarity=0.826 Sum_probs=269.2
Q ss_pred eecCeeccCCcceeCCCCccccccceEEEEEEEEEeCCCeEeecChHhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 012487 159 FSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSPTIEQFVDAVKHTVVA 238 (462)
Q Consensus 159 W~ng~ivp~~~~~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr~d~Hl~RL~~SA~~L~mp~~~~e~l~~~I~~lv~~ 238 (462)
|.||+++|.+++.|++.|++|+||||||||||+|+..+|++++|++++|++||.+||++|+|+.++.+.|.+.+.++++.
T Consensus 1 ~~nG~~~~~~~a~i~~~Drg~~yGdGvFEtir~~~~~~g~~~~~~l~~Hl~RL~~sa~~L~i~~~~~~~l~~~l~~~~~~ 80 (313)
T TIGR01123 1 WHNGRLTPYGPLHLDPGSTVLHYGQECFEGLKAYRCADGSIVLFRPDANAARLRRSARRLLMPELPDELFLEALRQLVKA 80 (313)
T ss_pred CCCCEEEECccCeeCcchhHHHhhhhheeeeeEEECCCCcEeeeChHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999997778999999999999999999999999977899999999999999
Q ss_pred cCCcCCCCC-CcceEEEEEEeccCCcccccCCCCcEEEEEEeccCCCCC---CceeEEEeeeeeecCCCCCCCCCccccc
Q 012487 239 NKQWVPPPG-KGSLYIRPLLMGSGPVLGATPAPDYTFLAFASPVGNYHK---GYLNLVVEEKFYRAFPGGTGGVKAIVNY 314 (462)
Q Consensus 239 n~~~vP~~~-~g~lyIRp~~~g~~~~lGv~p~~~~~~~I~~~P~~~y~~---~~v~l~i~~~~~Ra~p~g~g~~Kt~gNY 314 (462)
|..+++... ++.+|||+++++++..+|+.+.+.+.++|++.|.++++. +++++.+...+.|..|..++.+|+.+||
T Consensus 81 ~~~~~~~~~~~~~~~ir~~v~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~l~~~K~~~ny 160 (313)
T TIGR01123 81 NKDWVPPYGSGASLYLRPFVIGTEPNLGVRPAPEYLFYVFASPVGAYFKGGLAPVSIFVTTEYDRAAPGGTGAVKVGGNY 160 (313)
T ss_pred ccccCCCCCCCCcEEEEeEEEecCCccccCCCCccEEEEEEEEchhhccccccceeEEecccceecCCCCCccceecccc
Confidence 987765322 357899999887766678877667888898888876654 3456666556788888778999996699
Q ss_pred ccchHHHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEEeC-CEEEccCCCCCCccchHHHHHHHHHHHcCCcEEEEEe
Q 012487 315 STVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKG-NVISTPATDGTILPGITRKSVIEIAQILGYQVEERAV 393 (462)
Q Consensus 315 a~~l~a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v~~-~~liTPpLs~~ILpGITR~siLela~~~G~~V~Er~I 393 (462)
+.+++++++|+++||||+|++|...+|+|+|++++|||++++ |+|+|||++.+||+||||+.||++|+++|++|+|++|
T Consensus 161 l~~vla~~eA~~~g~deal~ld~~g~g~v~E~~~sNlf~v~~~g~l~Tp~l~~~~L~GItR~~vi~l~~~~Gi~v~e~~i 240 (313)
T TIGR01123 161 AASLLAQAKAAEQGCDQVVYLDPVEHTYIEEVGAMNFFFITGDGELVTPPLSGSILPGITRDSLLQLAKDLGMEVEERRI 240 (313)
T ss_pred HHHHHHHHHHHHCCCCEEEEEeCCCCeEEEEcCcEeEEEEEcCCEEEeCCCCCCCCcchHHHHHHHHHHHcCCeEEEEec
Confidence 999999999999999999999973224599999999999985 7999999999999999999999999999999999999
Q ss_pred Chhhhhcc----ceeEEEecccceEEeEEEEECCeEEEc-CCCchHHHHHHHHHHHHhhccCCCCCCCCeEEC
Q 012487 394 AVEELFDS----EEVFCTGTAMVVNPVNSITYQGKRIEY-KTGPETVAQKLYEMLVGIQTGRIEDKMGWTVEL 461 (462)
Q Consensus 394 ~~~eL~~a----dEvF~tgTa~gI~PV~~I~~~~~~i~~-~~~~gp~t~~L~~~l~~iq~G~~~d~~gW~~~v 461 (462)
+++||.+| ||+|+|||+.+|+||.+|+++++.+.+ .+.+||++++|+++|.++++|+.++..+|+++|
T Consensus 241 ~~~~l~~A~~~~devfltnS~~gi~PV~~i~~d~~~~~~~~g~~g~~~~~l~~~~~~~~~~~~~~~~~w~~~~ 313 (313)
T TIGR01123 241 DIDELKAFVEAGEEVFACGTAAVITPVGEIQHGGKEVVFASGQPGEVTKALYDELTDIQYGDFEDPYGWIVEV 313 (313)
T ss_pred CHHHHHHHHhcCCEEEEccCceEEEEEEEEEECCeEEEcCCCCCChHHHHHHHHHHHHhcCCCCCCCCCeeeC
Confidence 99999998 999999999999999999777776544 445899999999999999999988888999886
No 8
>TIGR01122 ilvE_I branched-chain amino acid aminotransferase, group I. Among the class IV aminotransferases are two phylogenetically separable groups of branched-chain amino acid aminotransferase (IlvE). The last common ancestor of the two lineages appears also to have given rise to a family of D-amino acid aminotransferases (DAAT). This model represents the IlvE family more strongly similar to the DAAT family.
Probab=100.00 E-value=9.7e-58 Score=458.16 Aligned_cols=289 Identities=33% Similarity=0.555 Sum_probs=257.7
Q ss_pred eecCeeccCCcceeCCCCccccccceEEEEEEEEEeCCCeEeecChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHHHHH
Q 012487 159 FSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSP-TIEQFVDAVKHTVV 237 (462)
Q Consensus 159 W~ng~ivp~~~~~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr~d~Hl~RL~~SA~~L~mp~~-~~e~l~~~I~~lv~ 237 (462)
|.||+++|.+++.+++.|++|+||||+|||||+|++.||. ++|++++|++||.+||++|+|+.+ +.+.|.+.|.++++
T Consensus 1 ~~ng~~v~~~~~~i~~~drg~~~GdgvFEt~r~~~g~~~~-~~~~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~~i~ 79 (298)
T TIGR01122 1 WMDGEFVDWEDAKVHVLTHALHYGTGVFEGIRAYDTDKGP-AIFRLKEHIQRLYDSAKIYRMEIPYSKEELMEATRETLR 79 (298)
T ss_pred CcCCEEEEhhhcccChhhhhhhccceEEEEEEEEcCCCcc-eeeChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999665533 488999999999999999999866 79999999999999
Q ss_pred HcCCcCCCCCCcceEEEEEEeccCCcccccCC--CCcEEEEEEeccCCCC-----CCceeEEEeeeeeecCCCCC-CCCC
Q 012487 238 ANKQWVPPPGKGSLYIRPLLMGSGPVLGATPA--PDYTFLAFASPVGNYH-----KGYLNLVVEEKFYRAFPGGT-GGVK 309 (462)
Q Consensus 238 ~n~~~vP~~~~g~lyIRp~~~g~~~~lGv~p~--~~~~~~I~~~P~~~y~-----~~~v~l~i~~~~~Ra~p~g~-g~~K 309 (462)
.+.. ...|||++++++.+.+|+.+. .++.+++++.|.+.++ .+++++.+++ +.|..+..+ +++|
T Consensus 80 ~~~~-------~~~~ir~~v~rg~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~-~~r~~~~~~~~~~K 151 (298)
T TIGR01122 80 KNNL-------RSAYIRPLVFRGDGDLGLNPRAGYKPDVIIAAWPWGAYLGEEALEKGIDAKVSS-WRRNAPNTIPTAAK 151 (298)
T ss_pred hcCC-------CCEEEEEEEEEccCCCCcCCCCCCCceEEEEEeccccccCcccccCCeEEEEEE-EEcCCCCCcCccch
Confidence 8853 358999998866556777763 3678888888876543 2689998875 677766664 8999
Q ss_pred cccccccchHHHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEEeCCEEEccCCCCCCccchHHHHHHHHHHHcCCcEE
Q 012487 310 AIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATDGTILPGITRKSVIEIAQILGYQVE 389 (462)
Q Consensus 310 t~gNYa~~l~a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v~~~~liTPpLs~~ILpGITR~siLela~~~G~~V~ 389 (462)
+.+||+.++++.++|+++|+||+||+|. +|+|+|++++|||++++++|+||+++.++|+||||+.||++|+++|++|+
T Consensus 152 ~~~~yl~~v~a~~~a~~~g~de~l~ld~--~g~v~E~s~sNlf~v~~~~l~TP~~~~~~L~GItR~~il~la~~~g~~v~ 229 (298)
T TIGR01122 152 AGGNYLNSLLAKSEARRHGYDEAILLDV--EGYVAEGSGENIFIVKDGVLFTPPVTSSILPGITRDTVITLAKELGIEVV 229 (298)
T ss_pred hhhhhHHHHHHHHHHHHcCCCEEEEECC--CCCEEECCceEEEEEECCEEECCCCCCCcCcchHHHHHHHHHHHcCCcEE
Confidence 9967999999999999999999999996 79999999999999999999999999999999999999999999999999
Q ss_pred EEEeChhhhhccceeEEEecccceEEeEEEEECCeEEEcCCCchHHHHHHHHHHHHhhccCCCCCCCCeEEC
Q 012487 390 ERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLYEMLVGIQTGRIEDKMGWTVEL 461 (462)
Q Consensus 390 Er~I~~~eL~~adEvF~tgTa~gI~PV~~I~~~~~~i~~~~~~gp~t~~L~~~l~~iq~G~~~d~~gW~~~v 461 (462)
|++|+++||.+|||+|+|||+++|+||.+| +++.+ .++.+||++++|++.|.+++.|..+|+++|+++|
T Consensus 230 e~~i~~~eL~~adevfltns~~gv~PV~~i--d~~~~-~~~~~g~~~~~l~~~~~~~~~~~~~~~~~w~~~~ 298 (298)
T TIGR01122 230 EQPISREELYTADEAFFTGTAAEITPIREV--DGRKI-GNGRRGPVTKKLQEAFFDLVTGGTEDYWGWLTYV 298 (298)
T ss_pred EEeCCHHHHhhCCEEEEcCCcceEEEEEEE--CCEEC-CCCCCChHHHHHHHHHHHHHcCCCCCcCCCceeC
Confidence 999999999999999999999999999999 46655 3456899999999999999999999999999875
No 9
>PRK06606 branched-chain amino acid aminotransferase; Validated
Probab=100.00 E-value=6e-56 Score=447.11 Aligned_cols=291 Identities=33% Similarity=0.524 Sum_probs=258.8
Q ss_pred ceeecCeeccCCcceeCCCCccccccceEEEEEEEEEeCCCeEeecChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHHH
Q 012487 157 KNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSP-TIEQFVDAVKHT 235 (462)
Q Consensus 157 ~~W~ng~ivp~~~~~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr~d~Hl~RL~~SA~~L~mp~~-~~e~l~~~I~~l 235 (462)
..|.||+++|..++.+++.|++|+||||||||+|+|++.+|.. +|++++|++||.+||++|+|+.+ +.+.|.+.+.++
T Consensus 8 ~~~~nG~~~~~~~~~i~~~drg~~~GdgvFEtir~~~g~~~~~-~~~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~~ 86 (306)
T PRK06606 8 YIWFNGELVPWEDAKVHVLTHALHYGTGVFEGIRAYDTPKGPA-IFRLREHTKRLFNSAKILRMEIPYSVDELMEAQREV 86 (306)
T ss_pred cEEECCEEEEhHHcccChhhhhhhhcceeEEEEEEecCCCCCe-eeChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 5799999999999999999999999999999999998776663 78899999999999999999976 689999999999
Q ss_pred HHHcCCcCCCCCCcceEEEEEEeccCCcccccCC-CCcEEEEEEeccCCCC-----CCceeEEEeeeeeecCCCC-CCCC
Q 012487 236 VVANKQWVPPPGKGSLYIRPLLMGSGPVLGATPA-PDYTFLAFASPVGNYH-----KGYLNLVVEEKFYRAFPGG-TGGV 308 (462)
Q Consensus 236 v~~n~~~vP~~~~g~lyIRp~~~g~~~~lGv~p~-~~~~~~I~~~P~~~y~-----~~~v~l~i~~~~~Ra~p~g-~g~~ 308 (462)
++.+.. ...|||++++++...+|+.+. ..+.++|++.|.++|+ .+|+++.+++ +.|..+.. ++.+
T Consensus 87 i~~~~~-------~~~~ir~~v~rg~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~gv~l~~~~-~~r~~~~~~~~~~ 158 (306)
T PRK06606 87 VRKNNL-------KSAYIRPLVFVGDEGLGVRPHGLPTDVAIAAWPWGAYLGEEALEKGIRVKVSS-WTRHAPNSIPTRA 158 (306)
T ss_pred HHhcCC-------CCEEEEEEEEecCCccCcCCCCCCceEEEEEeccccccCcccccCCeEEEEee-EecCCCCCcCcch
Confidence 998763 368999998876656677654 3567888888876543 2689998875 56766655 5789
Q ss_pred CcccccccchHHHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEEeCCEEEccCCCCCCccchHHHHHHHHHHHcCCcE
Q 012487 309 KAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATDGTILPGITRKSVIEIAQILGYQV 388 (462)
Q Consensus 309 Kt~gNYa~~l~a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v~~~~liTPpLs~~ILpGITR~siLela~~~G~~V 388 (462)
|+.+||+.++++.++|+++|+||+||+|. +|+|+|++++|||++++++|+||+++.+||+||||+.||++|+++|++|
T Consensus 159 K~~~nyl~~vla~~ea~~~G~de~l~l~~--~g~v~E~~~sNlf~v~~~~l~TP~~~~giL~GitR~~vl~~~~~~g~~v 236 (306)
T PRK06606 159 KASGNYLNSILAKTEARRNGYDEALLLDV--EGYVSEGSGENIFIVRDGVLYTPPLTSSILEGITRDTVITLAKDLGIEV 236 (306)
T ss_pred hhhhccHHHHHHHHHHHHcCCCEEEEECC--CCCEEEcCceEEEEEECCEEECCCCcCCcCCCHHHHHHHHHHHHcCCcE
Confidence 98779999999999999999999999996 7999999999999999999999999999999999999999999999999
Q ss_pred EEEEeChhhhhccceeEEEecccceEEeEEEEECCeEEEcCCCchHHHHHHHHHHHHhhccCCCCCCCCeEEC
Q 012487 389 EERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLYEMLVGIQTGRIEDKMGWTVEL 461 (462)
Q Consensus 389 ~Er~I~~~eL~~adEvF~tgTa~gI~PV~~I~~~~~~i~~~~~~gp~t~~L~~~l~~iq~G~~~d~~gW~~~v 461 (462)
+|++|+++||.+|||+|+|||+++|+||.+| +++.+ .++.+||++++|+++|.+++.++.+|..+|+++|
T Consensus 237 ~e~~i~~~eL~~AdevfltnS~~gi~PV~~i--d~~~~-~~g~~g~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 306 (306)
T PRK06606 237 IERRITRDELYIADEVFFTGTAAEVTPIREV--DGRQI-GNGKRGPITEKLQSAYFDIVRGRTEKYAHWLTPV 306 (306)
T ss_pred EEEeCCHHHHhhCCEEEEcCCcceEEEEEEE--CcEEC-CCCCCCHHHHHHHHHHHHHHcCCCCCCCCCcccC
Confidence 9999999999999999999999999999999 46665 2446899999999999999999999999999865
No 10
>COG0115 IlvE Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.6e-53 Score=425.48 Aligned_cols=276 Identities=41% Similarity=0.631 Sum_probs=241.7
Q ss_pred CceeecCeeccCCcceeCCCCccccccceEEEEEEEEEeCCCeEeecChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHH
Q 012487 156 EKNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSP-TIEQFVDAVKH 234 (462)
Q Consensus 156 ~~~W~ng~ivp~~~~~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr~d~Hl~RL~~SA~~L~mp~~-~~e~l~~~I~~ 234 (462)
+.+|.||+++|.+++.+++.|+++|||++||||+|+|+ |+ +|++++|++||++||++|+||.+ +.+++......
T Consensus 2 ~~~~~~g~~~~~~~~~~~~~~~~~~~g~~vFE~~r~~~---g~--~~~l~~H~~RL~~Sa~~l~~~~~~~~~~~~~~~~~ 76 (284)
T COG0115 2 GKIWVNGELVPEEDAKLSVLDRGLHYGDGVFETLRAYN---GK--LFRLDEHLARLKRSAKRLGLPRPESEEEIELLIQL 76 (284)
T ss_pred CeEeECCEEccCcccccCcccceeccccceeEEEEEeC---Cc--ccChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 35699999999999999999999999999999999995 54 89999999999999999999998 56666656665
Q ss_pred HHHHcCCcCCCCCCcceEEEEEEeccCCcccccCCCCcEEEEEEeccCCCCC-----CceeEEEeeeeeecCCCCCCCCC
Q 012487 235 TVVANKQWVPPPGKGSLYIRPLLMGSGPVLGATPAPDYTFLAFASPVGNYHK-----GYLNLVVEEKFYRAFPGGTGGVK 309 (462)
Q Consensus 235 lv~~n~~~vP~~~~g~lyIRp~~~g~~~~lGv~p~~~~~~~I~~~P~~~y~~-----~~v~l~i~~~~~Ra~p~g~g~~K 309 (462)
++..+ .|.+ .+|+||++++++..+|+.+..++.+.++++|+++|++ +++.+.+.+ ..|..|.+++..|
T Consensus 77 ~~~~~-~~~~-----~~y~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~ 149 (284)
T COG0115 77 LLAKN-NLVP-----GLYIRPLVRGGGGGLGVRDATEPTLIVAASPVGAYLKGGRLEKGVVLVISS-PVRRAPPGPGAAK 149 (284)
T ss_pred HHHhh-CCCC-----ceEEEEEEEeecCCCCcCCCCccEEEEEEEecccccCcccccCCeEEEEee-hhhccCCCcchhh
Confidence 55544 4433 3999999999888899988778999999999999986 366666664 3455555455544
Q ss_pred cccccccchHHHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEEe-CCEEEccCCCCCCccchHHHHHHHHHHHcCCcE
Q 012487 310 AIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLK-GNVISTPATDGTILPGITRKSVIEIAQILGYQV 388 (462)
Q Consensus 310 t~gNYa~~l~a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v~-~~~liTPpLs~~ILpGITR~siLela~~~G~~V 388 (462)
.++||+.+++++.+|+++|++++|++|. +|+|+|++++|||+++ |++++||+++.+||+||||++||++|+++|++|
T Consensus 150 k~~~y~~~~~a~~~A~~~G~~eal~~~~--~G~V~Eg~~sNvf~v~~dg~~~TP~~~~~iL~GitR~~li~la~~~G~~v 227 (284)
T COG0115 150 KTGNYLSSVLAKREAKAAGADEALLLDE--DGYVTEGAGSNVFFVKGDGVLVTPPLSGGILPGITRDSLLELAKELGLTV 227 (284)
T ss_pred hhcccHHHHHHHHHHHHCCCCEEEEecC--CCeEEEcCcceEEEEEECCEEECCCCCCCccccHHHHHHHHHHHHcCceE
Confidence 4459999999999999999999999996 8999999999999999 889999999999999999999999999999999
Q ss_pred EEEEeChhhhhccceeEEEecccceEEeEEEEECCeEEEcCCCchHHHHHHHHHHHHhhccCC
Q 012487 389 EERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLYEMLVGIQTGRI 451 (462)
Q Consensus 389 ~Er~I~~~eL~~adEvF~tgTa~gI~PV~~I~~~~~~i~~~~~~gp~t~~L~~~l~~iq~G~~ 451 (462)
+|++|+.+||..|||+|+|||+++|+||..| +++ . +.+||+|++|++.|.++|+|..
T Consensus 228 ~E~~i~~~~l~~adevf~t~t~~~v~PV~~i--~~~-~---~~~gpit~~l~~~~~~~~~~~~ 284 (284)
T COG0115 228 EERPITLEDLKQADEVFLTNTAAGVTPVGLI--DGR-V---GQPGPVTKKLRELLTDIQYGEI 284 (284)
T ss_pred EEeecCHHHHhhCCEEEEEccceEEEEEEEE--CCc-c---CCCChHHHHHHHHHHHHhccCC
Confidence 9999999999999999999999999999999 344 2 5689999999999999999863
No 11
>cd01557 BCAT_beta_family BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate. The enzyme requires pyridoxal 5'-phosphate (PLP) as a cofactor to catalyze the reaction. It has been found that mammals have two foms of the enzyme - mitochondrial and cytosolic forms while bacteria contain only one form of the enzyme. The mitochondrial form plays a significant role in skeletal muscle glutamine and alanine synthesis and in interorgan nitrogen metabolism.Members of this subgroup are widely distributed in all three forms of life.
Probab=100.00 E-value=6.2e-53 Score=420.20 Aligned_cols=274 Identities=49% Similarity=0.826 Sum_probs=243.3
Q ss_pred eeCCCCccccccceEEEEEEEEEeCCCeEeecChHhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHcCCcCCCCCCcc
Q 012487 171 EMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSPTIEQFVDAVKHTVVANKQWVPPPGKGS 250 (462)
Q Consensus 171 ~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr~d~Hl~RL~~SA~~L~mp~~~~e~l~~~I~~lv~~n~~~vP~~~~g~ 250 (462)
.+++.|++|+||||||||+|+|+..||+.++|++++|++||.+||++|+|+.++.+.|.+.+.++++.|..|+|......
T Consensus 1 ~i~~~drg~~yGdgvFEtir~~~~~~g~g~~~~l~~Hl~RL~~sa~~l~i~~~~~~~l~~~i~~~i~~~~~~~~~~~~~~ 80 (279)
T cd01557 1 SLHPATHALHYGQAVFEGLKAYRTPDGKIVLFRPDENAERLNRSARRLGLPPFSVEEFIDAIKELVKLDADWVPYGGGAS 80 (279)
T ss_pred CcCccccHhhcChhheeeEEEEecCCCCEeEECHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCCC
Confidence 37899999999999999999997666766689999999999999999999966899999999999999998877655557
Q ss_pred eEEEEEEeccCCcccccCCCCcEEEEEEeccCCCCC---CceeEEEeeeeeecCCCCCCCCCcccccccchHHHHHHHHC
Q 012487 251 LYIRPLLMGSGPVLGATPAPDYTFLAFASPVGNYHK---GYLNLVVEEKFYRAFPGGTGGVKAIVNYSTVFKPVAEAKAK 327 (462)
Q Consensus 251 lyIRp~~~g~~~~lGv~p~~~~~~~I~~~P~~~y~~---~~v~l~i~~~~~Ra~p~g~g~~Kt~gNYa~~l~a~~eA~~~ 327 (462)
.|||++++++...+|+.+..+++++|++.|+++++. +++++.+++ +.|..|...+.+|+.+||+.+++++++|+++
T Consensus 81 ~~ir~~v~rg~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~gv~l~~~~-~~r~~~~~~~~~K~~~nyl~~vla~~eA~~~ 159 (279)
T cd01557 81 LYIRPFIFGTDPQLGVSPALEYLFAVFASPVGAYFKGGEKGVSALVSS-FRRAAPGGPGAAKAGGNYAASLLAQKEAAEK 159 (279)
T ss_pred EEEEEEEEeccccCCcCCCCccEEEEEEEEccccccCCCCCeEEEEee-EEcCCCCCCcccchhhccHHHHHHHHHHHHC
Confidence 999999987666678776566788898988877653 789998874 6787776677899866999999999999999
Q ss_pred CCCeEEEEeccCC-CEEEeeCceeEEEEeCCEEEccCCCCCCccchHHHHHHHHHHHcCCcEEEEEeChhhhhccceeEE
Q 012487 328 GFSDVLFLDVKTA-KYIEEVSTSNIFFLKGNVISTPATDGTILPGITRKSVIEIAQILGYQVEERAVAVEELFDSEEVFC 406 (462)
Q Consensus 328 G~ddvL~LD~~~~-g~V~E~stsNiF~v~~~~liTPpLs~~ILpGITR~siLela~~~G~~V~Er~I~~~eL~~adEvF~ 406 (462)
|+||+||+|. + |+|+|++++|||++++++|+||+++.++|+||||+.||++|+++|++|+|++|+++||.+|||+|+
T Consensus 160 g~de~l~ld~--~~g~v~E~~~sNlf~v~~~~l~TP~~~~~~L~Gitr~~v~~~~~~~Gi~v~e~~i~~~~l~~ade~f~ 237 (279)
T cd01557 160 GYDQALWLDG--AHGYVAEVGTMNIFFVKDGELITPPLDGSILPGITRDSILELARDLGIKVEERPITRDELYEADEVFA 237 (279)
T ss_pred CCCEEEEEcC--CCCEEEEeCcEEEEEEECCEEEcCCCcCCCCCchHHHHHHHHHHHcCCeEEEEeCCHHHHhhCCEEEE
Confidence 9999999996 6 999999999999999999999999989999999999999999999999999999999999999999
Q ss_pred EecccceEEeEEEEECCeEEE-cCCCchHHHHHHHHHHHHhhcc
Q 012487 407 TGTAMVVNPVNSITYQGKRIE-YKTGPETVAQKLYEMLVGIQTG 449 (462)
Q Consensus 407 tgTa~gI~PV~~I~~~~~~i~-~~~~~gp~t~~L~~~l~~iq~G 449 (462)
|||+.+|+||.+| +++.+. .++.+||++++|++.|.++++|
T Consensus 238 ~ns~~gi~pV~~i--~~~~~~~~~~~~gp~~~~l~~~~~~~~~~ 279 (279)
T cd01557 238 TGTAAVVTPVGEI--DYRGKEPGEGEVGPVTKKLYDLLTDIQYG 279 (279)
T ss_pred ecceeEEEEEEEE--ccccccCCCCCCCHHHHHHHHHHHHHhcC
Confidence 9999999999999 455541 1345899999999999999876
No 12
>PRK12479 branched-chain amino acid aminotransferase; Provisional
Probab=100.00 E-value=8.9e-53 Score=422.89 Aligned_cols=276 Identities=27% Similarity=0.403 Sum_probs=243.5
Q ss_pred CceeecCeeccCCcceeCCCCccccccceEEEEEEEEEeCCCeEeecChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHH
Q 012487 156 EKNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSP-TIEQFVDAVKH 234 (462)
Q Consensus 156 ~~~W~ng~ivp~~~~~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr~d~Hl~RL~~SA~~L~mp~~-~~e~l~~~I~~ 234 (462)
+..|.||+++|.+++.|++.|++|+||||||||||+| +|+ +|++++|++||.+||++|+|+.+ +.+++.+.+.+
T Consensus 4 ~~~~~nG~~~~~~~~~i~~~drg~~~GdgvFEt~r~~---~g~--~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~ 78 (299)
T PRK12479 4 QYIYMNGEFVEKEKAVVSVYDHGFLYGDGVFEGIRSY---GGN--VFCLKEHVKRLYESAKSILLTIPLTVDEMEEAVLQ 78 (299)
T ss_pred cEEEECCEEeEHHHCccccccchhheeeeEEEEEEEE---CCE--ecCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 4579999999999999999999999999999999998 677 78899999999999999999876 79999999999
Q ss_pred HHHHcCCcCCCCCCcceEEEEEEeccCCcccccCC--CCcEEEEEEeccCCCC----CCceeEEEeeeeeecCCCCC-CC
Q 012487 235 TVVANKQWVPPPGKGSLYIRPLLMGSGPVLGATPA--PDYTFLAFASPVGNYH----KGYLNLVVEEKFYRAFPGGT-GG 307 (462)
Q Consensus 235 lv~~n~~~vP~~~~g~lyIRp~~~g~~~~lGv~p~--~~~~~~I~~~P~~~y~----~~~v~l~i~~~~~Ra~p~g~-g~ 307 (462)
+++.+.. ...|||+.++++.+.+|+.+. .++.++|++.|.+.+. .+|+++.+.+ +.|..|+.+ ..
T Consensus 79 ~i~~~~~-------~~~~ir~~v~rg~g~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~gv~~~~~~-~~r~~~~~~~~~ 150 (299)
T PRK12479 79 TLQKNEY-------ADAYIRLIVSRGKGDLGLDPRSCVKPSVIIIAEQLKLFPQEFYDNGLSVVSVA-SRRNTPDALDPR 150 (299)
T ss_pred HHHHcCC-------CCeEEEEEEEecCCCCCCCCccCCCceEEEEEEEcccCChhHHhCCeEEEEEe-EeccCCCccCcc
Confidence 9988752 357999998876566777654 3567888888875432 4788888775 577766665 68
Q ss_pred CCcccccccchHHHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEEeCCEEEccCCCCCCccchHHHHHHHHHHHcCCc
Q 012487 308 VKAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATDGTILPGITRKSVIEIAQILGYQ 387 (462)
Q Consensus 308 ~Kt~gNYa~~l~a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v~~~~liTPpLs~~ILpGITR~siLela~~~G~~ 387 (462)
+|+. ||+.+++++++|+++|+||+||+|. +|+|+|++++|||++++++|+||+++.++|+||||+.|+++|+++|++
T Consensus 151 ~K~~-nyl~~vla~~ea~~~g~de~l~ld~--~g~v~E~s~sNlf~v~~~~l~TP~l~~giL~GItR~~il~~~~~~g~~ 227 (299)
T PRK12479 151 IKSM-NYLNNVLVKIEAAQAGVLEALMLNQ--QGYVCEGSGDNVFVVKDGKVLTPPSYLGALEGITRNSVIELCERLSIP 227 (299)
T ss_pred chhh-hhHHHHHHHHHHHHcCCCEEEEEcC--CCcEEECCceEEEEEECCEEEeCCCcCCCCcCHHHHHHHHHHHHcCCe
Confidence 9997 9999999999999999999999996 799999999999999999999999999999999999999999999999
Q ss_pred EEEEEeChhhhhccceeEEEecccceEEeEEEEECCeEEEcCCCchHHHHHHHHHHHHhhccC
Q 012487 388 VEERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLYEMLVGIQTGR 450 (462)
Q Consensus 388 V~Er~I~~~eL~~adEvF~tgTa~gI~PV~~I~~~~~~i~~~~~~gp~t~~L~~~l~~iq~G~ 450 (462)
|+|+.|+++||.+|||+|+|||+++|+||.+| +++.+ ..+.+||++++|+++|.+...+.
T Consensus 228 v~e~~i~~~~L~~adevfltnS~~gi~PV~~i--d~~~~-~~~~~g~~~~~l~~~~~~~~~~~ 287 (299)
T PRK12479 228 CEERPFTRHDVYVADEVFLTGTAAELIPVVKV--DSREI-GDGKPGSVTKQLTEEFKKLTRER 287 (299)
T ss_pred EEEEeCCHHHHHhCCeeeeecCcccEEEEEEE--CCEEc-CCCCcCHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999 46665 34568999999999998766654
No 13
>PRK07544 branched-chain amino acid aminotransferase; Validated
Probab=100.00 E-value=1.9e-52 Score=418.84 Aligned_cols=274 Identities=30% Similarity=0.454 Sum_probs=237.4
Q ss_pred CceeecCeeccCCcceeCCCCccccccceEEEEEEEEEeCCCeEeecChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHH
Q 012487 156 EKNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSP-TIEQFVDAVKH 234 (462)
Q Consensus 156 ~~~W~ng~ivp~~~~~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr~d~Hl~RL~~SA~~L~mp~~-~~e~l~~~I~~ 234 (462)
+..|.||+++|.+++.+++.|++|+||||||||+|+| +|+ +|++++|++||.+||++|+|+.+ +.+.|.+.+.+
T Consensus 9 ~~~~~nG~~~~~~~~~i~~~drg~~~GdgvFEt~r~~---~g~--~~~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~ 83 (292)
T PRK07544 9 GFIWMDGELVPWRDAKVHVLTHGLHYASSVFEGERAY---GGK--IFKLREHSERLRRSAELLDFEIPYSVAEIDAAKKE 83 (292)
T ss_pred CeEEECCEEEEhHHCccChhhhHhhhcceeEEeeEee---CCc--ccChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 4579999999999999999999999999999999998 676 78899999999999999999976 78999999999
Q ss_pred HHHHcCCcCCCCCCcceEEEEEEeccCCcccccCCC-CcEEEEEEeccCCCC-----CCceeEEEeeeeeecCCCCC-CC
Q 012487 235 TVVANKQWVPPPGKGSLYIRPLLMGSGPVLGATPAP-DYTFLAFASPVGNYH-----KGYLNLVVEEKFYRAFPGGT-GG 307 (462)
Q Consensus 235 lv~~n~~~vP~~~~g~lyIRp~~~g~~~~lGv~p~~-~~~~~I~~~P~~~y~-----~~~v~l~i~~~~~Ra~p~g~-g~ 307 (462)
+++.+.. ...|||++++.+...+|+.+.. ...++|...|.+.++ .+++++.+++ +.|..|..+ ..
T Consensus 84 ~i~~~~~-------~~~~ir~~v~rg~~~~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~gv~l~~~~-~~r~~~~~~~~~ 155 (292)
T PRK07544 84 TLAANGL-------TDAYVRPVAWRGSEMMGVSAQQNKIHLAIAAWEWPSYFDPEAKMKGIRLDIAK-WRRPDPETAPSA 155 (292)
T ss_pred HHHhcCC-------CCeEEEEEEEecCCCCCcCCCCCCcEEEEEEeccccccCccccCCCEEEEEeE-EEcCCCCCcCHh
Confidence 9998853 3579999988665566776543 355666666655433 2689998875 567666554 56
Q ss_pred CCcccccccchHHHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEEeCCEEEccCCCCCCccchHHHHHHHHHHHcCCc
Q 012487 308 VKAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATDGTILPGITRKSVIEIAQILGYQ 387 (462)
Q Consensus 308 ~Kt~gNYa~~l~a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v~~~~liTPpLs~~ILpGITR~siLela~~~G~~ 387 (462)
+|+.|||+.+++++++|+++|+||+||+|. +|+|+|++++|||+++|++|+||+++ ++|+||||+.||++|+++|++
T Consensus 156 ~k~~~~yl~~vla~~~A~~~G~deal~ld~--~g~V~E~~~sNlf~v~~~~l~TP~~~-~~L~GItR~~vl~~a~~~g~~ 232 (292)
T PRK07544 156 AKAAGLYMICTISKHAAEAKGYADALMLDY--RGYVAEATGANIFFVKDGVIHTPTPD-CFLDGITRQTVIELAKRRGIE 232 (292)
T ss_pred hhhhcccHHHHHHHHHHHHcCCCeEEEECC--CCCEEEcCceEEEEEECCEEECCCCc-ccccchhHHHHHHHHHHcCCe
Confidence 798889999999999999999999999996 79999999999999999999999986 599999999999999999999
Q ss_pred EEEEEeChhhhhccceeEEEecccceEEeEEEEECCeEEEcCCCchHHHHHHHHHHHHhhccCC
Q 012487 388 VEERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLYEMLVGIQTGRI 451 (462)
Q Consensus 388 V~Er~I~~~eL~~adEvF~tgTa~gI~PV~~I~~~~~~i~~~~~~gp~t~~L~~~l~~iq~G~~ 451 (462)
|+|++|+++||.+|||+|+|||+++|+||.+|+ ++.+ . +||++++|++.|.+...++.
T Consensus 233 v~e~~i~~~eL~~adevfltnS~~gi~PV~~i~--~~~~--~--~g~~~~~l~~~~~~~~~~~~ 290 (292)
T PRK07544 233 VVERHIMPEELAGFSECFLTGTAAEVTPVSEIG--EYRF--T--PGAITRDLMDDYEALVRPRA 290 (292)
T ss_pred EEEEecCHHHHhhcCceeecCccceEEEEEEEe--eEEe--C--CChHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999994 6655 2 68999999999987665543
No 14
>PRK08320 branched-chain amino acid aminotransferase; Reviewed
Probab=100.00 E-value=6.9e-52 Score=413.75 Aligned_cols=273 Identities=31% Similarity=0.469 Sum_probs=239.4
Q ss_pred ceeecCeeccCCcceeCCCCccccccceEEEEEEEEEeCCCeEeecChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHHH
Q 012487 157 KNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSP-TIEQFVDAVKHT 235 (462)
Q Consensus 157 ~~W~ng~ivp~~~~~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr~d~Hl~RL~~SA~~L~mp~~-~~e~l~~~I~~l 235 (462)
..|.||++++..++.+++.|++|+|||||||||+++ +|+ +|++++|++||.+||++|+|+.+ +.+.+.+.+.++
T Consensus 4 ~~~~nG~~~~~~~~~i~~~drg~~~GdgvFEt~~v~---~g~--~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~~ 78 (288)
T PRK08320 4 LIYLNGEFVPKEEAKVSVFDHGFLYGDGVFEGIRAY---NGR--VFRLKEHIDRLYDSAKAIMLEIPLSKEEMTEIVLET 78 (288)
T ss_pred EEEECCEEEEHHHCcccccchhhhhcceEEEEEEEE---CCE--eecHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHH
Confidence 469999999999999999999999999999999998 677 67899999999999999999766 789999999999
Q ss_pred HHHcCCcCCCCCCcceEEEEEEeccCCcccccCC--CCcEEEEEEeccCCCCC----CceeEEEeeeeeecCCCCC-CCC
Q 012487 236 VVANKQWVPPPGKGSLYIRPLLMGSGPVLGATPA--PDYTFLAFASPVGNYHK----GYLNLVVEEKFYRAFPGGT-GGV 308 (462)
Q Consensus 236 v~~n~~~vP~~~~g~lyIRp~~~g~~~~lGv~p~--~~~~~~I~~~P~~~y~~----~~v~l~i~~~~~Ra~p~g~-g~~ 308 (462)
++.+.. ...+||+.++++.+.+|+.+. .++.+++++.|..+++. +|+++.+.+ +.|..+..+ .++
T Consensus 79 i~~~~~-------~~~~iri~v~rg~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~r~~~~~~~~~~ 150 (288)
T PRK08320 79 LRKNNL-------RDAYIRLVVSRGVGDLGLDPRKCPKPTVVCIAEPIGLYPGELYEKGLKVITVS-TRRNRPDALSPQV 150 (288)
T ss_pred HHhcCC-------CCEEEEEEEEECCCcCCCCcccCCCceEEEEEEEcCcCChhHHhcCeEEEEEe-eeccCCCCcCccc
Confidence 998752 367999998876566787764 35567788877655432 788888765 567666555 689
Q ss_pred CcccccccchHHHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEEeCCEEEccCCCCCCccchHHHHHHHHHHHcCCcE
Q 012487 309 KAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATDGTILPGITRKSVIEIAQILGYQV 388 (462)
Q Consensus 309 Kt~gNYa~~l~a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v~~~~liTPpLs~~ILpGITR~siLela~~~G~~V 388 (462)
|+. ||+.++++.++|+++||||+||+|. +|+|+|++++|||++++++|+||+++.++|+||||+.||++|+++|++|
T Consensus 151 K~~-nyl~~v~a~~~A~~~g~de~L~ld~--~g~v~E~s~sNlf~~~~~~l~TP~~~~~~L~GitR~~ll~~~~~~g~~v 227 (288)
T PRK08320 151 KSL-NYLNNILAKIEANLAGVDEAIMLND--EGYVAEGTGDNIFIVKNGKLITPPTYAGALEGITRNAVIEIAKELGIPV 227 (288)
T ss_pred hhh-hhHHHHHHHHHHHHcCCCEEEEECC--CCeEEEcCcEEEEEEECCEEECCCCcCCCCcCHHHHHHHHHHHHcCCeE
Confidence 997 9999999999999999999999996 7999999999999999999999999999999999999999999999999
Q ss_pred EEEEeChhhhhccceeEEEecccceEEeEEEEECCeEEEcCCCchHHHHHHHHHHHHhhc
Q 012487 389 EERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLYEMLVGIQT 448 (462)
Q Consensus 389 ~Er~I~~~eL~~adEvF~tgTa~gI~PV~~I~~~~~~i~~~~~~gp~t~~L~~~l~~iq~ 448 (462)
+|+.++++||.+|||+|+|||+++|+||.+| +++.+ ..+.+||++++|++.|.+...
T Consensus 228 ~e~~l~~~dL~~ade~f~~ns~~gv~pV~~i--~~~~~-~~~~~g~~~~~l~~~~~~~~~ 284 (288)
T PRK08320 228 REELFTLHDLYTADEVFLTGTAAEVIPVVKV--DGRVI-GDGKPGPITKKLLEEFRELTK 284 (288)
T ss_pred EEEECCHHHHHhCCEEEEecChhhEEEEEEE--CCEEC-CCCCcCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999 46654 245689999999999976543
No 15
>PRK13356 aminotransferase; Provisional
Probab=100.00 E-value=8.2e-52 Score=413.19 Aligned_cols=271 Identities=25% Similarity=0.378 Sum_probs=230.8
Q ss_pred ceeecCeeccCCcceeCCCCccccccceEEEEEEEEEeCCCeEeecChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHHH
Q 012487 157 KNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSP-TIEQFVDAVKHT 235 (462)
Q Consensus 157 ~~W~ng~ivp~~~~~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr~d~Hl~RL~~SA~~L~mp~~-~~e~l~~~I~~l 235 (462)
..|.||++++.+.+.+++.|++|+||||||||+|+| +|+ +|++++|++||.+||++|+|+.+ +.+.+.+.+.++
T Consensus 8 ~~~~nG~~~~~~~~~i~~~drg~~yGdgvFEtir~~---~g~--~~~l~~Hl~RL~~Sa~~L~i~~~~~~~~l~~~i~~~ 82 (286)
T PRK13356 8 WTFFDGEWHEGNVPIMGPADHAAWLGSTVFDGARAF---EGV--TPDLDLHCARVNRSAEALGLKPTVSAEEIEALAREG 82 (286)
T ss_pred eEEECCEEcchhhcccccccchhhhcceeEEEEEEe---cCC--CCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 369999999999999999999999999999999999 566 67899999999999999999855 799999999999
Q ss_pred HHHcCCcCCCCCCcceEEEEEEeccCC-cccccCC-CCcEEEEEEeccCCCCCCceeEEEeeeeeecCCCCC-CCCCccc
Q 012487 236 VVANKQWVPPPGKGSLYIRPLLMGSGP-VLGATPA-PDYTFLAFASPVGNYHKGYLNLVVEEKFYRAFPGGT-GGVKAIV 312 (462)
Q Consensus 236 v~~n~~~vP~~~~g~lyIRp~~~g~~~-~lGv~p~-~~~~~~I~~~P~~~y~~~~v~l~i~~~~~Ra~p~g~-g~~Kt~g 312 (462)
++.+.. ....|||++++.+.. ..|+.+. ....+.+...+.+....+++++.+++ +.|..+..+ +.+|+.+
T Consensus 83 i~~~~~------~~~~~ir~~v~rg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~l~~~~-~~r~~~~~~~~~~K~~~ 155 (286)
T PRK13356 83 LKRFDP------DTALYIRPMYWAEDGFASGVAPDPESTRFALCLEEAPMPEPTGFSLTLSP-FRRPTLEMAPTDAKAGC 155 (286)
T ss_pred HHHcCC------CCcEEEEEEEEeccCcccCcCCCcCCceEEEEEEccCCCCCCcEEEEEee-eecCCCCCCCccceecc
Confidence 998752 236799998875433 2244333 23444555554433223789998875 567665543 6789888
Q ss_pred ccccchHHHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEEeCCEEEccCCCCCCccchHHHHHHHHHHHcCCcEEEEE
Q 012487 313 NYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATDGTILPGITRKSVIEIAQILGYQVEERA 392 (462)
Q Consensus 313 NYa~~l~a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v~~~~liTPpLs~~ILpGITR~siLela~~~G~~V~Er~ 392 (462)
||+.+++++++|+++|+||+||+|. +|+|+|++++|||++++++|+||+++.++|+||||+.||++|++.|++|+|++
T Consensus 156 nyl~~vla~~ea~~~g~deal~ld~--~G~v~E~~~sNlf~v~~~~l~TP~~~~~~L~GItR~~vi~~a~~~gi~v~e~~ 233 (286)
T PRK13356 156 LYPNNARALREARSRGFDNALVLDM--LGNVAETATSNVFMVKDGVVFTPVPNGTFLNGITRQRVIALLREDGVTVVETT 233 (286)
T ss_pred chHHHHHHHHHHHHcCCCEEEEECC--CCCEEEcCceEEEEEECCEEEcCCCCCCcccCHHHHHHHHHHHHcCCeEEEEe
Confidence 9999999999999999999999996 79999999999999999999999999999999999999999999999999999
Q ss_pred eChhhhhccceeEEEecccceEEeEEEEECCeEEEcCCCchHHHHHHHHHHHHhh
Q 012487 393 VAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLYEMLVGIQ 447 (462)
Q Consensus 393 I~~~eL~~adEvF~tgTa~gI~PV~~I~~~~~~i~~~~~~gp~t~~L~~~l~~iq 447 (462)
|+++||.+|||+|+|||+.+|+||.+| +++.+ .+||++++|+++|.+..
T Consensus 234 i~~~eL~~adevfltns~~gi~PV~~i--d~~~~----~~g~~~~~l~~~~~~~~ 282 (286)
T PRK13356 234 LTYEDFLEADEVFSTGNYSKVVPVTRF--DDRSL----QPGPVTRRARELYWDWA 282 (286)
T ss_pred cCHHHHHhcCceEEecChheEEEEEEE--CCEEe----cCChHHHHHHHHHHHHH
Confidence 999999999999999999999999999 57765 26899999999987543
No 16
>cd01558 D-AAT_like D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids. It plays a major role in the synthesis of bacterial cell wall components like D-alanine and D-glutamate in addition to other D-amino acids. The enzyme like other members of this superfamily requires PLP as a cofactor. Members of this subgroup are found in all three forms of life.
Probab=100.00 E-value=2.7e-51 Score=405.28 Aligned_cols=263 Identities=30% Similarity=0.457 Sum_probs=226.2
Q ss_pred eecCeeccCCcceeCCCCccccccceEEEEEEEEEeCCCeEeecChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHHHHH
Q 012487 159 FSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSP-TIEQFVDAVKHTVV 237 (462)
Q Consensus 159 W~ng~ivp~~~~~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr~d~Hl~RL~~SA~~L~mp~~-~~e~l~~~I~~lv~ 237 (462)
|.||+++|..++.+++.|++|+||||+|||||+| +|+ +|++++|++||.+||++|+|+.+ +.+.+.+.+.++++
T Consensus 1 ~~nG~~~~~~~~~i~~~d~g~~~G~gvFEt~r~~---~g~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~~~~~ 75 (270)
T cd01558 1 YLNGEYVPREEAKVSVFDRGFLFGDGVYEVIRVY---NGK--PFALDEHLDRLYRSAKELRIDIPYTREELKELIRELVA 75 (270)
T ss_pred CcCCeEeEHHHCccccccchhcccceEEEEEEEE---CCE--EecHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999998 676 78899999999999999999865 78999999999999
Q ss_pred HcCCcCCCCCCcceEEEEEEeccCCcccccCC--CCcEEEEEEeccCCC----CCCceeEEEeeeeeecCCCCCCCCCcc
Q 012487 238 ANKQWVPPPGKGSLYIRPLLMGSGPVLGATPA--PDYTFLAFASPVGNY----HKGYLNLVVEEKFYRAFPGGTGGVKAI 311 (462)
Q Consensus 238 ~n~~~vP~~~~g~lyIRp~~~g~~~~lGv~p~--~~~~~~I~~~P~~~y----~~~~v~l~i~~~~~Ra~p~g~g~~Kt~ 311 (462)
.+.. ..+.+|+|+ ..|.+ ..|+.+. ..+.+++++.|++++ +.+++++.+++ ..|. ...++|+.
T Consensus 76 ~~~~-----~~~~~~~~~-t~g~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~gv~~~~~~-~~~~---~~~~~K~~ 144 (270)
T cd01558 76 KNEG-----GEGDVYIQV-TRGVG-PRGHDFPKCVKPTVVIITQPLPLPPAELLEKGVRVITVP-DIRW---LRCDIKSL 144 (270)
T ss_pred HcCC-----CCceEEEEE-EeCCC-ccCCCCCCCCCCEEEEEEEecCCCChhhhhcCeEEEEec-cccc---CCCCchhh
Confidence 8752 235677876 34544 3455442 345677888887642 33789888775 3332 34689997
Q ss_pred cccccchHHHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEEeCCEEEccCCCCCCccchHHHHHHHHHHHcCCcEEEE
Q 012487 312 VNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATDGTILPGITRKSVIEIAQILGYQVEER 391 (462)
Q Consensus 312 gNYa~~l~a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v~~~~liTPpLs~~ILpGITR~siLela~~~G~~V~Er 391 (462)
||+.+++++++|+++|+||+||+|. +|+|+|++++|||++++++|+||+++.++|+||||+.||++|+++|++|+|+
T Consensus 145 -ny~~~~~a~~~a~~~g~de~l~ld~--~g~v~E~~~sNif~~~~~~l~TP~~~~~~L~GitR~~vl~~a~~~g~~v~e~ 221 (270)
T cd01558 145 -NLLNNVLAKQEAKEAGADEAILLDA--DGLVTEGSSSNVFIVKNGVLVTPPLDNGILPGITRATVIELAKELGIPVEER 221 (270)
T ss_pred -ccHHHHHHHHHHHHcCCCEEEEEcC--CCEEEEcCcEEEEEEECCEEECCCCcCCCCCChHHHHHHHHHHHcCCeEEEE
Confidence 9999999999999999999999996 7999999999999999999999999999999999999999999999999999
Q ss_pred EeChhhhhccceeEEEecccceEEeEEEEECCeEEEcCCCchHHHHHHHHHH
Q 012487 392 AVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLYEML 443 (462)
Q Consensus 392 ~I~~~eL~~adEvF~tgTa~gI~PV~~I~~~~~~i~~~~~~gp~t~~L~~~l 443 (462)
.|+++||.+|||+|+|||+++|+||.+| +++.+ .++..||++++|++.|
T Consensus 222 ~i~~~eL~~ade~fl~ns~~gv~PV~~i--~~~~~-~~~~~~~~~~~l~~~~ 270 (270)
T cd01558 222 PFSLEELYTADEVFLTSTTAEVMPVVEI--DGRPI-GDGKPGPVTKRLREAY 270 (270)
T ss_pred eCCHHHHhhCCEEEEecCcccEEEEEEE--CCeEC-CCCCCCHHHHHHHHhC
Confidence 9999999999999999999999999999 46554 2445799999998754
No 17
>PRK07650 4-amino-4-deoxychorismate lyase; Provisional
Probab=100.00 E-value=5.3e-51 Score=406.60 Aligned_cols=271 Identities=24% Similarity=0.332 Sum_probs=234.1
Q ss_pred eeecCeeccCCcceeCCCCccccccceEEEEEEEEEeCCCeEeecChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHHHH
Q 012487 158 NFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSP-TIEQFVDAVKHTV 236 (462)
Q Consensus 158 ~W~ng~ivp~~~~~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr~d~Hl~RL~~SA~~L~mp~~-~~e~l~~~I~~lv 236 (462)
.|.||+++|..++.+++.|++|+||||+|||||+| +|+ +|++++|++||.+||++|+|+.+ +.+.+.+.+.+++
T Consensus 2 ~~~nG~~~~~~~~~v~~~drg~~~GdgvFEt~r~~---~g~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~l~~~~ 76 (283)
T PRK07650 2 IYVNGQYVEEEEARISPFDHGYLYGLGVFETFRIY---NGH--PFLLDDHYDRLNDALDTLQIEWTMTKDEVLLILKNLL 76 (283)
T ss_pred EEECCEEeEHHHCeecccccccccccEEEEEEEEE---CCE--EEcHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 59999999999999999999999999999999998 677 56799999999999999999975 7899999999999
Q ss_pred HHcCCcCCCCCCcceEEEEEEeccCCcccccCC--CCcEEEEEEeccCCCCC-CceeEEEeeeeeecCCCCCCCCCcccc
Q 012487 237 VANKQWVPPPGKGSLYIRPLLMGSGPVLGATPA--PDYTFLAFASPVGNYHK-GYLNLVVEEKFYRAFPGGTGGVKAIVN 313 (462)
Q Consensus 237 ~~n~~~vP~~~~g~lyIRp~~~g~~~~lGv~p~--~~~~~~I~~~P~~~y~~-~~v~l~i~~~~~Ra~p~g~g~~Kt~gN 313 (462)
+.+.. ...+||+.++++.+.+|+.+. ..+.++++..|.++... ......+. ...|..+..+..+|+. |
T Consensus 77 ~~~~~-------~~~~iRl~v~rg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Kt~-~ 147 (283)
T PRK07650 77 EKNGL-------ENAYVRFNVSAGIGEIGLQTEMYEEPTVIVYMKPLAPPGLPAEKEGVVL-KQRRNTPEGAFRLKSH-H 147 (283)
T ss_pred HhcCC-------CcEEEEEEEEeCCCCCCCCCCCCCCCEEEEEEEcCCCCChhhcCeEEEE-EEEecCCCCCcchhHH-h
Confidence 88752 357999988765455666543 45678888888754322 11122222 3456667778899997 9
Q ss_pred cccchHHHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEEeCCEEEccCCCCCCccchHHHHHHHHHHHcCCcEEEEEe
Q 012487 314 YSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATDGTILPGITRKSVIEIAQILGYQVEERAV 393 (462)
Q Consensus 314 Ya~~l~a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v~~~~liTPpLs~~ILpGITR~siLela~~~G~~V~Er~I 393 (462)
|..+++++++|+++|+||+||+|. +|+|+|++++|||++++++|+||+++.|+|+||||+.||++|++.|++|+|+.|
T Consensus 148 y~~~v~a~~~a~~~g~de~llln~--~G~v~E~s~sNif~v~~g~l~TP~l~~g~L~GitR~~li~~~~~~g~~v~e~~i 225 (283)
T PRK07650 148 YLNNILGKREIGNDPNKEGIFLTE--EGYVAEGIVSNLFWVKGDIVYTPSLETGILNGITRAFVIKVLEELGIEVKEGFY 225 (283)
T ss_pred HHHHHHHHHHHHHcCCCeEEEECC--CCeEEEcCceEEEEEECCEEEcCCCcCCCcccHHHHHHHHHHHHcCCeEEEEec
Confidence 999999999999999999999996 799999999999999999999999999999999999999999999999999999
Q ss_pred ChhhhhccceeEEEecccceEEeEEEEECCeEEEcCCCchHHHHHHHHHHHHhhc
Q 012487 394 AVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLYEMLVGIQT 448 (462)
Q Consensus 394 ~~~eL~~adEvF~tgTa~gI~PV~~I~~~~~~i~~~~~~gp~t~~L~~~l~~iq~ 448 (462)
+++||..|||+|+|||+++|+||.+| +++.+ ++.+||++++|+++|.+...
T Consensus 226 ~~~dL~~adeifl~ns~~gv~pV~~i--~~~~~--~g~~g~~~~~l~~~~~~~~~ 276 (283)
T PRK07650 226 TKEELLSADEVFVTNSIQEIVPLTRI--EERDF--PGKVGMVTKRLQNLYEMQRE 276 (283)
T ss_pred CHHHHhhCCEeeeecCcccEEEEEEE--CCEEe--CCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 57765 46689999999999976443
No 18
>PRK06680 D-amino acid aminotransferase; Reviewed
Probab=100.00 E-value=2.5e-50 Score=402.71 Aligned_cols=270 Identities=21% Similarity=0.338 Sum_probs=229.3
Q ss_pred ceeecCeeccCCcceeCCCCccccccceEEEEEEEEEeCCCeEeecChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHHH
Q 012487 157 KNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSP-TIEQFVDAVKHT 235 (462)
Q Consensus 157 ~~W~ng~ivp~~~~~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr~d~Hl~RL~~SA~~L~mp~~-~~e~l~~~I~~l 235 (462)
..|.||+++|..++.+++.|++|+||||||||||+| +|+ +|++++|++||.+||++|+|+.+ +.+.|.+.|.++
T Consensus 4 ~~~~nG~~~~~~~~~i~~~drg~~yGdGvFEt~r~~---~g~--~~~l~~Hl~RL~~Sa~~L~i~~~~~~~~l~~~i~~~ 78 (286)
T PRK06680 4 IAYVNGRYVNHREARVHIEDRGFQFADGIYEVCAVR---DGK--LVDLDRHLARLFRSLGEIRIAPPMTRAELVEVLREL 78 (286)
T ss_pred EEEECCEEEEHHHCcccccccccceeeEEEEEEEEE---CCE--EechHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHH
Confidence 579999999999999999999999999999999999 787 56789999999999999999966 789999999999
Q ss_pred HHHcCCcCCCCCCcceEEEEEEeccCCccccc-C--CCCcEEEEEEeccCCC-----CCCceeEEEeeeeeecCCCCCCC
Q 012487 236 VVANKQWVPPPGKGSLYIRPLLMGSGPVLGAT-P--APDYTFLAFASPVGNY-----HKGYLNLVVEEKFYRAFPGGTGG 307 (462)
Q Consensus 236 v~~n~~~vP~~~~g~lyIRp~~~g~~~~lGv~-p--~~~~~~~I~~~P~~~y-----~~~~v~l~i~~~~~Ra~p~g~g~ 307 (462)
++.|+. ...+||+.+..+....|+. + ..++.++|++.|+++| +.+|+++.+.+. .| ....+
T Consensus 79 ~~~~~~-------~~~~lr~~vtrG~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~gv~~~~~~~-~~---~~~~~ 147 (286)
T PRK06680 79 IRRNRV-------REGLVYLQVTRGVARRDHVFPAADVKPSVVVFAKSVDFARPAAAAETGIKVITVPD-NR---WKRCD 147 (286)
T ss_pred HHHcCC-------CceEEEEEEEeCCCCCCCCCCCCCCCcEEEEEEEeccccCChhHHhCCeEEEEecC-CC---CCCCC
Confidence 998753 2335555554332233443 2 2456788988888652 236888776642 22 23467
Q ss_pred CCcccccccchHHHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEE-eCCEEEccCCCCCCccchHHHHHHHHHHHcCC
Q 012487 308 VKAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFL-KGNVISTPATDGTILPGITRKSVIEIAQILGY 386 (462)
Q Consensus 308 ~Kt~gNYa~~l~a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v-~~~~liTPpLs~~ILpGITR~siLela~~~G~ 386 (462)
+|+. ||+.+++++++|+++|+||+||+| +|+|+|++++|||++ ++++|+||+++.++|+||||+.||++|++.|+
T Consensus 148 ~Ks~-nyl~~vla~~eA~~~g~dd~l~ld---~g~v~E~~~sN~f~~~~~~~l~TP~~~~~iL~Gitr~~il~~a~~~g~ 223 (286)
T PRK06680 148 IKSV-GLLPNVLAKQAAKEAGAQEAWMVD---DGFVTEGASSNAWIVTKDGKLVTRPADNFILPGITRHTLIDLAKELGL 223 (286)
T ss_pred cchh-ccHHHHHHHHHHHHCCCCEEEEec---CCEEEEcCcEEEEEEEECCEEEeCCCCCCCCcCHHHHHHHHHHHHcCC
Confidence 9998 899999999999999999999998 489999999999999 99999999999999999999999999999999
Q ss_pred cEEEEEeChhhhhccceeEEEecccceEEeEEEEECCeEEEcCCCchHHHHHHHHHHHHhhcc
Q 012487 387 QVEERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLYEMLVGIQTG 449 (462)
Q Consensus 387 ~V~Er~I~~~eL~~adEvF~tgTa~gI~PV~~I~~~~~~i~~~~~~gp~t~~L~~~l~~iq~G 449 (462)
+|+|+.|+++||.+|||+|+|||+++|+||.+| +++.+ .++.+||++++|++.|.+...+
T Consensus 224 ~v~e~~i~~~el~~ade~f~~ns~~gi~pV~~i--d~~~~-~~~~~g~~~~~L~~~~~~~~~~ 283 (286)
T PRK06680 224 EVEERPFTLQEAYAAREAFITAASSFVFPVVQI--DGKQI-GNGKPGPIAKRLREAYEEFARL 283 (286)
T ss_pred eEEEEcCCHHHHhcCcEEEEecCcccEEEEEEE--CCEEC-CCCCCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999 46665 2445799999999999875543
No 19
>TIGR01121 D_amino_aminoT D-amino acid aminotransferase. Specificity is broad for various D-amino acids, and differs among members of the family; the family is designated equivalog, but with this caveat attached.
Probab=100.00 E-value=6.1e-50 Score=397.83 Aligned_cols=265 Identities=23% Similarity=0.315 Sum_probs=221.7
Q ss_pred eeecCeeccCCcceeCCCCccccccceEEEEEEEEEeCCCeEeecChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHHHH
Q 012487 158 NFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSP-TIEQFVDAVKHTV 236 (462)
Q Consensus 158 ~W~ng~ivp~~~~~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr~d~Hl~RL~~SA~~L~mp~~-~~e~l~~~I~~lv 236 (462)
.|.||+++|.+++.+++.|++|+||||||||||+| +|+ +|++++|++||.+||++|+|+.+ +.+.+.+.|.+++
T Consensus 2 ~~~nG~~~~~~~~~i~~~drgl~yGdgvFEtir~~---~g~--~~~l~~H~~RL~~Sa~~l~i~~~~~~~~l~~~i~~~~ 76 (276)
T TIGR01121 2 VLWNGQLVEREEAKIDIEDRGYQFGDGVYEVIRVY---NGK--LFTVNEHIDRLYASAAKIRIDIPYTKEELHQLLHELV 76 (276)
T ss_pred EEECCEEeEHHHCeecccccccccccEEEEEEEEE---CCE--EeChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 59999999999999999999999999999999999 676 78899999999999999999865 7899999999999
Q ss_pred HHcCCcCCCCCCcceEEEEEEeccCCccccc-CC--CCcEEEEEEeccCCC---CCCceeEEEeeeeeecCCCCCCCCCc
Q 012487 237 VANKQWVPPPGKGSLYIRPLLMGSGPVLGAT-PA--PDYTFLAFASPVGNY---HKGYLNLVVEEKFYRAFPGGTGGVKA 310 (462)
Q Consensus 237 ~~n~~~vP~~~~g~lyIRp~~~g~~~~lGv~-p~--~~~~~~I~~~P~~~y---~~~~v~l~i~~~~~Ra~p~g~g~~Kt 310 (462)
+.+.. ...+||+.+..+....|.. |. ..+.++++..|.+.. +.+|+++.+..+ .| ....++|+
T Consensus 77 ~~~~~-------~~~~irl~~~rg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~-~~---~~~~~~K~ 145 (276)
T TIGR01121 77 EKNNL-------NTGHVYFQVTRGVAPRNHQFPAGTVKPVITAYTKEVPRPEENLEKGVKAITVED-IR---WLRCDIKS 145 (276)
T ss_pred HhcCC-------CceEEEEEEEcCCCCcCCCCCCCCCCcEEEEEEecccCChhHHhcCeEEEEecC-CC---ccCCCcch
Confidence 98763 2345565544322223333 22 234566666665432 237888766543 22 23468998
Q ss_pred ccccccchHHHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEEeCCEEEccCCCCCCccchHHHHHHHHHHHcCCcEEE
Q 012487 311 IVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATDGTILPGITRKSVIEIAQILGYQVEE 390 (462)
Q Consensus 311 ~gNYa~~l~a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v~~~~liTPpLs~~ILpGITR~siLela~~~G~~V~E 390 (462)
. ||+.+++++++|+++|+||+||++ +|+|+|++++|||++++++|+||+++.++|+||||+.||++|+++|++|+|
T Consensus 146 ~-nyl~~vla~~eA~~~g~de~l~~~---~g~v~E~~~sNif~v~~~~~~TP~~~~~~L~GitR~~vl~~a~~~g~~v~e 221 (276)
T TIGR01121 146 L-NLLGNVLAKQEAHEKGAYEAILHR---GGTVTEGSSSNVYGIKDGVLYTHPANNLILNGITRMVILACAEENGIPVKE 221 (276)
T ss_pred h-hhHHHHHHHHHHHHcCCCEEEEec---CCeEEecCceeEEEEECCEEEeCCCcCCCCcCHHHHHHHHHHHHCCCeEEE
Confidence 7 999999999999999999999995 589999999999999999999999999999999999999999999999999
Q ss_pred EEeChhhhhccceeEEEecccceEEeEEEEECCeEEEcCCCchHHHHHHHHHHHH
Q 012487 391 RAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLYEMLVG 445 (462)
Q Consensus 391 r~I~~~eL~~adEvF~tgTa~gI~PV~~I~~~~~~i~~~~~~gp~t~~L~~~l~~ 445 (462)
++|+++||.+|||+|+|||+++|+||.+| +++.+ .++..||++++|+++|.+
T Consensus 222 ~~i~~~el~~ade~fltns~~gi~PV~~i--d~~~~-~~~~~g~~~~~L~~~~~~ 273 (276)
T TIGR01121 222 EPFTKEELLNADEVFVSSTTAEITPVIEI--DGQQI-GDGKPGPWTRQLQKAFEE 273 (276)
T ss_pred EeCCHHHHhcCCEEEEecCcccEEEEEEE--CCEEC-CCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999 45654 244579999999998864
No 20
>PRK12400 D-amino acid aminotransferase; Reviewed
Probab=100.00 E-value=9.7e-50 Score=399.17 Aligned_cols=267 Identities=18% Similarity=0.258 Sum_probs=222.2
Q ss_pred ceeecCeeccCCc--ceeCCCCccccccceEEEEEEEEEeCCCeEeecChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHH
Q 012487 157 KNFSHGILTRFGR--LEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSP-TIEQFVDAVK 233 (462)
Q Consensus 157 ~~W~ng~ivp~~~--~~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr~d~Hl~RL~~SA~~L~mp~~-~~e~l~~~I~ 233 (462)
..|.||+++|.++ ..|++.|++|+||||||||||+| +|+ +|++++|++||.+||++|+|+.| +.+.+.+.+.
T Consensus 6 ~~~~ng~~v~~~~~~~~i~~~drgl~yGdgvFEtir~~---~G~--~~~l~~Hl~RL~~Sa~~L~i~~p~~~~~l~~~l~ 80 (290)
T PRK12400 6 FVLWNDAVIDTTKQKTYIELEERGLQFGDGVYEVIRLY---KGN--FHLLDPHITRLYRSMEEIELTLPFSKAELITLLY 80 (290)
T ss_pred EEEECCEEechHHcCceeccccchhhhcceEEEEEEEE---CCE--ecccHHHHHHHHHHHHHhCCCCCCCHHHHHHHHH
Confidence 5799999999994 55999999999999999999998 677 56789999999999999999976 7889999999
Q ss_pred HHHHHcCCcCCCCCCcceEEEEEEeccCCcccccCC--CCcEEEEEEeccCCC---CCCceeEEEeeeeeecCCCCCCCC
Q 012487 234 HTVVANKQWVPPPGKGSLYIRPLLMGSGPVLGATPA--PDYTFLAFASPVGNY---HKGYLNLVVEEKFYRAFPGGTGGV 308 (462)
Q Consensus 234 ~lv~~n~~~vP~~~~g~lyIRp~~~g~~~~lGv~p~--~~~~~~I~~~P~~~y---~~~~v~l~i~~~~~Ra~p~g~g~~ 308 (462)
++++.+.. ....+||+.+..+....|..++ ..++++++..|.+.+ ..+++++...+. .+....++
T Consensus 81 ~~~~~~~~------~~~~~iri~v~rG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~~ 150 (290)
T PRK12400 81 KLIENNNF------HEDGTIYLQVSRGVQARTHTFSYDVPPTIYAYITKKERPALWIEYGVRAISEPD----TRWLRCDI 150 (290)
T ss_pred HHHHhcCC------CCCEEEEEEEEeCCCCCCCCCCCCCCcEEEEEEecccCchhHHhcCcEEEECCC----CCccCCCC
Confidence 99998752 1235677666543333454432 344566666553221 126777665432 12334678
Q ss_pred CcccccccchHHHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEEeCCEEEccCCCCCCccchHHHHHHHHHHHcCCcE
Q 012487 309 KAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATDGTILPGITRKSVIEIAQILGYQV 388 (462)
Q Consensus 309 Kt~gNYa~~l~a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v~~~~liTPpLs~~ILpGITR~siLela~~~G~~V 388 (462)
|+. ||+.+++++++|++.|+||+||+| +|+|+|++++|||++++++|+|||++.++|+||||+.||++|+++|++|
T Consensus 151 Kt~-nyl~~vla~~ea~~~g~deaL~l~---~g~v~E~t~sNif~v~~~~l~TPpl~~g~L~GItR~~llela~~~gi~v 226 (290)
T PRK12400 151 KSL-NLLPNILAATKAERKGCKEALFVR---NGTVTEGSHSNFFLIKNGTLYTHPANHLILNGIIRQYVLSLAKTLRIPV 226 (290)
T ss_pred ccc-ccHHHHHHHHHHHHcCCCEEEEEc---CCEEEEcCceEEEEEECCEEEeCCCCCCcCcCHHHHHHHHHHHHcCCcE
Confidence 997 999999999999999999999996 5999999999999999999999999999999999999999999999999
Q ss_pred EEEEeChhhhhccceeEEEecccceEEeEEEEECCeEEEcCCCchHHHHHHHHHHHH
Q 012487 389 EERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLYEMLVG 445 (462)
Q Consensus 389 ~Er~I~~~eL~~adEvF~tgTa~gI~PV~~I~~~~~~i~~~~~~gp~t~~L~~~l~~ 445 (462)
+|+.++++||.+|||+|+|||+++|+||++| +++.+ .++.+||++++|++.|.+
T Consensus 227 ~E~~i~~~eL~~Adevfltns~~gv~PV~~i--~~~~~-~~~~~g~~t~~l~~~~~~ 280 (290)
T PRK12400 227 QEELFSVRDVYQADECFFTGTTIEILPMTHL--DGTAI-QDGQVGPITKMLQRSFSQ 280 (290)
T ss_pred EEEeCCHHHHHhCCeeeEccCcceEEEEEEE--CCEEC-CCCCcCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 46665 355689999999999865
No 21
>PLN02845 Branched-chain-amino-acid aminotransferase-like protein
Probab=100.00 E-value=9.7e-50 Score=407.18 Aligned_cols=272 Identities=23% Similarity=0.307 Sum_probs=232.0
Q ss_pred ceeecCeeccCCcceeCCCCccccccceEEEEEEEEEeCCCeEeecChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHHH
Q 012487 157 KNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSP-TIEQFVDAVKHT 235 (462)
Q Consensus 157 ~~W~ng~ivp~~~~~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr~d~Hl~RL~~SA~~L~mp~~-~~e~l~~~I~~l 235 (462)
..|.||+++|.+++.|++.|++|+||||+|||||++ +|+ +|++++|++||.+||++|+|+.+ +.+.+.+.|.++
T Consensus 42 ~~~~nG~~v~~~~a~i~~~Drgl~~GdGvFETirv~---~G~--~~~le~Hl~RL~~Sa~~L~i~~p~~~~~l~~~i~~~ 116 (336)
T PLN02845 42 SSVVGGITTDPAAMVIPLDDHMVHRGHGVFDTATIR---DGH--LYELDAHLDRFLRSAAKAKIPLPFDRATLRRILLQT 116 (336)
T ss_pred eEEECCEEccHHHCcccccccceeecceEEEEEEEE---CCE--EcCHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHH
Confidence 459999999999999999999999999999999998 677 67899999999999999999876 789999999999
Q ss_pred HHHcCCcCCCCCCcceEEEEEEeccCCcccccC--CCCcEEEEEEeccCCCC--CCceeEEEeeeeeecCCCCCCCCCcc
Q 012487 236 VVANKQWVPPPGKGSLYIRPLLMGSGPVLGATP--APDYTFLAFASPVGNYH--KGYLNLVVEEKFYRAFPGGTGGVKAI 311 (462)
Q Consensus 236 v~~n~~~vP~~~~g~lyIRp~~~g~~~~lGv~p--~~~~~~~I~~~P~~~y~--~~~v~l~i~~~~~Ra~p~g~g~~Kt~ 311 (462)
++.+.. ...+||+.+..+.+.+++.+ ...+.++++..|.+.+. .+++++.+++ +.|. +..+.++|+.
T Consensus 117 i~~~~~-------~~~~irl~vtrG~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~gv~l~~~~-~~~~-~~~~~~~Kt~ 187 (336)
T PLN02845 117 VAASGC-------RNGSLRYWLSAGPGGFSLSPSGCSEPAFYAVVIEDTYAQDRPEGVKVVTSS-VPIK-PPQFATVKSV 187 (336)
T ss_pred HHhcCC-------CcEEEEEEEEeCCCCCCCCCCCCCCCEEEEEEccccccccccCCeEEEEee-eeec-CCccccchhh
Confidence 998752 34678877765433455543 24567888887754332 3688888775 3453 3446789987
Q ss_pred cccccchHHHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEEe-CCEEEccCCCCCCccchHHHHHHHHHHHc---C--
Q 012487 312 VNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLK-GNVISTPATDGTILPGITRKSVIEIAQIL---G-- 385 (462)
Q Consensus 312 gNYa~~l~a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v~-~~~liTPpLs~~ILpGITR~siLela~~~---G-- 385 (462)
||+.++++.++|+++|+||+||+|. +|+|+|++++||||++ +++|+||+++ +||+||||+.||++|+++ |
T Consensus 188 -nyl~~vla~~eA~~~G~deaLlln~--~G~V~Egt~sNiF~v~~~~~l~TP~l~-~iL~GItR~~vlela~~~~~~G~~ 263 (336)
T PLN02845 188 -NYLPNALSQMEAEERGAFAGIWLDE--EGFVAEGPNMNVAFLTNDGELVLPPFD-KILSGCTARRVLELAPRLVSPGDL 263 (336)
T ss_pred -hhHHHHHHHHHHHHcCCCEEEEECC--CCcEEEcCcceEEEEEECCEEEeCCCC-CcCccHHHHHHHHHHHhhhccCCc
Confidence 9999999999999999999999996 7999999999999885 9999999997 499999999999999986 8
Q ss_pred CcEEEEEeChhhhhccceeEEEecccceEEeEEEEECCeEEEcCCCchHHHHHHHHHHHHhhcc
Q 012487 386 YQVEERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLYEMLVGIQTG 449 (462)
Q Consensus 386 ~~V~Er~I~~~eL~~adEvF~tgTa~gI~PV~~I~~~~~~i~~~~~~gp~t~~L~~~l~~iq~G 449 (462)
++|+|+.|+++||.+|||+|+|||+++|+||.+| +++.+ .++.+||++++|++.|.+...+
T Consensus 264 i~V~E~~i~~~eL~~AdEvFltnS~~gv~PV~~i--d~~~~-~~g~~gp~t~~L~~~~~~~~~~ 324 (336)
T PLN02845 264 RGVKQRKISVEEAKAADEMMLIGSGVPVLPIVSW--DGQPI-GDGKVGPITLALHDLLLDDMRS 324 (336)
T ss_pred eEEEEEecCHHHHhcCCEEEEecCcccEEEEEEE--CCEEC-CCCCCCHHHHHHHHHHHHHHhc
Confidence 8999999999999999999999999999999999 57665 2456899999999999875544
No 22
>PRK07849 4-amino-4-deoxychorismate lyase; Provisional
Probab=100.00 E-value=2.1e-49 Score=397.35 Aligned_cols=265 Identities=22% Similarity=0.297 Sum_probs=227.8
Q ss_pred ceeecC-----eeccCCcceeCCCCccccccceEEEEEEEEEeCCCeEeecChHhHHHHHHHHHhhcCCCCCCHHHHHHH
Q 012487 157 KNFSHG-----ILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSPTIEQFVDA 231 (462)
Q Consensus 157 ~~W~ng-----~ivp~~~~~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr~d~Hl~RL~~SA~~L~mp~~~~e~l~~~ 231 (462)
.+|.|| +++|.+++.|++.|++|+||||+|||||++ +|+ +|.+++|++||.+||+.|+|+.++.+.|.++
T Consensus 8 ~~~~ng~~~~~~~~~~~~a~i~~~drg~~~GdgvFEt~rv~---~g~--i~~l~~Hl~RL~~Sa~~l~i~~~~~~~l~~~ 82 (292)
T PRK07849 8 VVTLDPYGGSERVHDPSAPLLHADDLAAVRGDGVFETLLVR---DGR--PCNLEAHLERLARSAALLDLPEPDLDRWRRA 82 (292)
T ss_pred EEEECCCCccceEechHHCCccchhcchhccceEEEEEEEE---CCE--ECCHHHHHHHHHHHHHhcCCCCCCHHHHHHH
Confidence 579999 999999999999999999999999999998 677 5668999999999999999998888999999
Q ss_pred HHHHHHHcCCcCCCCCCcceEEEEEEeccCCcccccCCCCcEEEEEEeccCCCC----CCceeEEEeeee-----eecCC
Q 012487 232 VKHTVVANKQWVPPPGKGSLYIRPLLMGSGPVLGATPAPDYTFLAFASPVGNYH----KGYLNLVVEEKF-----YRAFP 302 (462)
Q Consensus 232 I~~lv~~n~~~vP~~~~g~lyIRp~~~g~~~~lGv~p~~~~~~~I~~~P~~~y~----~~~v~l~i~~~~-----~Ra~p 302 (462)
|.++++.+.. . ....+||+++..+.... ..+.+++.+.|++.+. .+++++.+++.. .+..|
T Consensus 83 i~~~v~~~~~---~--~~~~~iRl~v~~g~~~~-----~~~~~~i~~~p~~~~~~~~~~~gv~l~~~~~~~~~~~~~~~p 152 (292)
T PRK07849 83 VELAIEEWRA---P--EDEAALRLVYSRGRESG-----GAPTAWVTVSPVPERVARARREGVSVITLDRGYPSDAAERAP 152 (292)
T ss_pred HHHHHHHhcC---C--CCCeEEEEEEeCCCCCC-----CCCeEEEEEeecCccchhhccCCeEEEEEeccccCcccccCc
Confidence 9999987631 0 13568898765432211 2456788888875432 368888876421 12245
Q ss_pred CCCCCCCcccccccchHHHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEEeCCEEEccCCCCCCccchHHHHHHHHHH
Q 012487 303 GGTGGVKAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATDGTILPGITRKSVIEIAQ 382 (462)
Q Consensus 303 ~g~g~~Kt~gNYa~~l~a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v~~~~liTPpLs~~ILpGITR~siLela~ 382 (462)
..+.++|+. ||+.++++.++|+++|+||+||+|. +|+|+|++++|||+++|++|+||+++.++|+||||+.||++|+
T Consensus 153 ~~~~~~Kt~-ny~~~i~a~~~A~~~g~dd~L~ld~--~G~v~E~s~~Nif~~~~g~l~TP~~~~giL~GItR~~vie~~~ 229 (292)
T PRK07849 153 WLLAGAKTL-SYAVNMAALRYAARRGADDVIFTST--DGYVLEGPTSTVVIATDDRLLTPPPWYGILPGTTQAALFEVAR 229 (292)
T ss_pred ccccccchh-hhHHHHHHHHHHHHcCCCEEEEEcC--CCcEEECCceEEEEEECCEEECCCCcCCCCccHHHHHHHHHHH
Confidence 567889997 9999999999999999999999996 7999999999999999999999999999999999999999999
Q ss_pred HcCCcEEEEEeChhhhhccceeEEEecccceEEeEEEEECCeEEEcCCCchHHHHHHHHHHHH
Q 012487 383 ILGYQVEERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLYEMLVG 445 (462)
Q Consensus 383 ~~G~~V~Er~I~~~eL~~adEvF~tgTa~gI~PV~~I~~~~~~i~~~~~~gp~t~~L~~~l~~ 445 (462)
++|++|+|+.|+++||.+|||+|+|||+++|+||.+| +++.+ . .||++++|++.|.+
T Consensus 230 ~~g~~v~er~i~~~eL~~Adevfltns~~gi~pV~~i--d~~~~--~--~~~~~~~l~~~~~~ 286 (292)
T PRK07849 230 EKGWDCEYRALRPADLFAADGVWLVSSVRLAARVHTL--DGRPL--P--RDPLADELTELVDA 286 (292)
T ss_pred HcCCceEEEECCHHHHhhCCEEEEecCcceEEEEEEE--CCEEC--C--CChHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 56665 2 57999999998865
No 23
>TIGR03461 pabC_Proteo aminodeoxychorismate lyase. Members of this protein family are aminodeoxychorismate lyase (ADC lyase), EC 4.1.3.38, the PabC protein of PABA biosynthesis. PABA (para-aminobenzoate) is a precursor of folate, needed for de novo purine biosynthesis. This enzyme is a pyridoxal-phosphate-binding protein in the class IV aminotransferase family (pfam01063).
Probab=100.00 E-value=4.3e-49 Score=388.01 Aligned_cols=254 Identities=26% Similarity=0.349 Sum_probs=217.7
Q ss_pred eecCeeccCCcceeCCCCccccccceEEEEEEEEEeCCCeEeecChHhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 012487 159 FSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSPTIEQFVDAVKHTVVA 238 (462)
Q Consensus 159 W~ng~ivp~~~~~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr~d~Hl~RL~~SA~~L~mp~~~~e~l~~~I~~lv~~ 238 (462)
|.||++ .+.+++.|++|+||+|||||||++ +|+ +|++++|++||.+||+.|+|+.++.+.+.+.+.++++.
T Consensus 1 ~~nG~~----~~~i~~~d~g~~~G~gvFEt~r~~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~l~~~~~~~~~~ 71 (261)
T TIGR03461 1 WVNGVL----QTQISVSDRGLQYGDGCFTTAKVR---NGK--IELLDLHLERLQDAAARLGIPLPDWDALREEMAQLAAG 71 (261)
T ss_pred CcCCcc----cCccCcccccccccceeEEEEEEE---CCE--eccHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHh
Confidence 788885 668999999999999999999998 777 67789999999999999999988899999999999886
Q ss_pred cCCcCCCCCCcceEEEEEEeccCCcccccC--CCCcEEEEEEeccCCCC----CCceeEEEeeeeeecCCCCCCCCCccc
Q 012487 239 NKQWVPPPGKGSLYIRPLLMGSGPVLGATP--APDYTFLAFASPVGNYH----KGYLNLVVEEKFYRAFPGGTGGVKAIV 312 (462)
Q Consensus 239 n~~~vP~~~~g~lyIRp~~~g~~~~lGv~p--~~~~~~~I~~~P~~~y~----~~~v~l~i~~~~~Ra~p~g~g~~Kt~g 312 (462)
+. ..+||+.+..+....|+.+ ...+.+++.+.|+++++ .+|+++.+++ ..+..+..+.++|+.
T Consensus 72 ~~---------~~~ir~~v~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~Kt~- 140 (261)
T TIGR03461 72 YS---------LGVLKVIISRGSGGRGYSPPGCSDPTRIISVSPYPAHYSAWQQQGIRLGVSP-VRLGRNPLLAGIKHL- 140 (261)
T ss_pred CC---------CeEEEEEEecCCCCCCCCCCCCCCCcEEEEeccCcccChhHhcCCEEEEEec-cccCCCCCCcCcccc-
Confidence 52 3567776654333334443 24456788888876554 2788988876 344444567899997
Q ss_pred ccccchHHHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEEeCCEEEccCCCCCCccchHHHHHHHHHHHcCCcEEEEE
Q 012487 313 NYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATDGTILPGITRKSVIEIAQILGYQVEERA 392 (462)
Q Consensus 313 NYa~~l~a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v~~~~liTPpLs~~ILpGITR~siLela~~~G~~V~Er~ 392 (462)
||+.++++.++|+++|+||+||+|. +|+|+|++++|||+++|++|+||+++.++|+||||+.||++|++.|++|+|+.
T Consensus 141 ~y~~~~~a~~~A~~~g~de~llln~--~g~v~E~s~sNif~~~~~~l~TP~~~~~~L~GItR~~il~~~~~~g~~v~E~~ 218 (261)
T TIGR03461 141 NRLEQVLIKAELENSEADEALVLDT--DGNVVECTAANIFWRKGNQVFTPDLSYCGVAGVMRQHVLALLPALGYEIEEVK 218 (261)
T ss_pred ccHHHHHHHHHhhhcCCCEEEEECC--CCCEEEeccEEEEEEECCEEECCCccccCcccHHHHHHHHHHHHcCCeEEEEe
Confidence 9999999999999999999999996 79999999999999999999999999899999999999999999999999999
Q ss_pred eChhhhhccceeEEEecccceEEeEEEEECCeEEEcCCCchHHHHHHH
Q 012487 393 VAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLY 440 (462)
Q Consensus 393 I~~~eL~~adEvF~tgTa~gI~PV~~I~~~~~~i~~~~~~gp~t~~L~ 440 (462)
|+++||.+|||+|+|||+++|+||.+| +++.+ . +||++++|+
T Consensus 219 i~~~eL~~ade~f~~ns~~gi~pV~~i--d~~~~--~--~~~~~~~l~ 260 (261)
T TIGR03461 219 AGLEELLSADEVFITNSLMGVVPVNAI--GETSY--P--SRTLTRLLQ 260 (261)
T ss_pred cCHHHHhhCCEEEEeCCccceEEEEEE--CCEEe--c--chHHHHHhh
Confidence 999999999999999999999999999 56665 2 579998874
No 24
>PRK06092 4-amino-4-deoxychorismate lyase; Reviewed
Probab=100.00 E-value=6.5e-49 Score=388.36 Aligned_cols=260 Identities=23% Similarity=0.292 Sum_probs=220.4
Q ss_pred eeecCeeccCCcceeCCCCccccccceEEEEEEEEEeCCCeEeecChHhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHH
Q 012487 158 NFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSPTIEQFVDAVKHTVV 237 (462)
Q Consensus 158 ~W~ng~ivp~~~~~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr~d~Hl~RL~~SA~~L~mp~~~~e~l~~~I~~lv~ 237 (462)
.|.||++ .+.++++|++|+||||+|||||++ +|+ +|++++|++||.+||++|+|+.++.+.+.+.+.+++.
T Consensus 2 ~~~nG~~----~~~i~~~d~g~~~GdgvFEtir~~---~g~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~~~~l~~~~~ 72 (268)
T PRK06092 2 FWINGQP----QESLSVSDRSTQYGDGCFTTARVR---DGQ--VSLLSRHLQRLQDACERLAIPLDDWAQLEQEMKQLAA 72 (268)
T ss_pred EEECCcC----cCccCccccccccccceeeEEEEE---CCe--eccHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHh
Confidence 4889986 468999999999999999999998 677 6678999999999999999998877788888887773
Q ss_pred HcCCcCCCCCCcceEEEEEEeccCCcccccCC--CCcEEEEEEeccCCCC----CCceeEEEeeeeeecCCCCCCCCCcc
Q 012487 238 ANKQWVPPPGKGSLYIRPLLMGSGPVLGATPA--PDYTFLAFASPVGNYH----KGYLNLVVEEKFYRAFPGGTGGVKAI 311 (462)
Q Consensus 238 ~n~~~vP~~~~g~lyIRp~~~g~~~~lGv~p~--~~~~~~I~~~P~~~y~----~~~v~l~i~~~~~Ra~p~g~g~~Kt~ 311 (462)
.. ...+||+.+..+....|+.+. ..+.++|++.|+++++ .+|+++.+++. .+..+..+.++|+.
T Consensus 73 ~~---------~~~~iri~v~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~gv~l~~~~~-~~~~~~~~~~~Kt~ 142 (268)
T PRK06092 73 EL---------ENGVLKVIISRGSGGRGYSPAGCAAPTRILSVSPYPAHYSRWREQGITLALCPT-RLGRNPLLAGIKHL 142 (268)
T ss_pred hC---------CCeEEEEEEEccCCCCCCCCCCCCCCeEEEEeccCCccChhHhhCCEEEEEecc-ccCCCCCccCcchh
Confidence 21 245677776654444556543 3457888888887654 27899888763 33334457789996
Q ss_pred cccccchHHHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEEeCCEEEccCCCCCCccchHHHHHHHHHHHcCCcEEEE
Q 012487 312 VNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATDGTILPGITRKSVIEIAQILGYQVEER 391 (462)
Q Consensus 312 gNYa~~l~a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v~~~~liTPpLs~~ILpGITR~siLela~~~G~~V~Er 391 (462)
||+.++++.++|+++|+||+||+|. +|+|+|++++|||++++++|+||+++.++|+||||+.||++|+++|++|+|+
T Consensus 143 -ny~~~~~a~~~A~~~g~de~l~l~~--~g~v~E~s~sNif~v~~~~~~TP~~~~~~L~GitR~~vl~~~~~~g~~v~e~ 219 (268)
T PRK06092 143 -NRLEQVLIRAELEQTEADEALVLDS--EGWVIECCAANLFWRKGGVVYTPDLDQCGVAGVMRQFILELLAQSGYPVVEV 219 (268)
T ss_pred -hhHHHHHHHHHHHhcCCCEEEEECC--CCCEEEccceEEEEEECCEEECCCccccCcccHHHHHHHHHHHHcCCeEEEE
Confidence 9999999999999999999999996 7999999999999999999999999888999999999999999999999999
Q ss_pred EeChhhhhccceeEEEecccceEEeEEEEECCeEEEcCCCchHHHHHHHHHHHH
Q 012487 392 AVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLYEMLVG 445 (462)
Q Consensus 392 ~I~~~eL~~adEvF~tgTa~gI~PV~~I~~~~~~i~~~~~~gp~t~~L~~~l~~ 445 (462)
.|+++||.+|||+|+|||+++|+||.+| +++.+ . .||++++|++.+..
T Consensus 220 ~i~~~dL~~adevfltns~~gi~pV~~i--d~~~~--~--~g~~~~~l~~~~~~ 267 (268)
T PRK06092 220 DASLEELLQADEVFICNSLMPVWPVRAI--GETSY--S--SGTLTRYLQPLCER 267 (268)
T ss_pred ECCHHHHhhCCEEEEeCCcceEEEEEEE--CCEEc--c--chHHHHHHHHHHhc
Confidence 9999999999999999999999999999 46665 2 58999999988753
No 25
>cd00449 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV). This D-amino acid superfamily, one of five classes of PLPDE, consists of branched-chain amino acid aminotransferases (BCAT), D-amino acid transferases (DAAT), and 4-amino-4-deoxychorismate lyases (ADCL). BCAT catalyzes the reversible transamination reaction between the L-branched-chain amino and alpha-keto acids. DAAT catalyzes the synthesis of D-glutamic acid and D-alanine, and ADCL converts 4-amino-4-deoxychorismate to p-aminobenzoate and pyruvate. Except for a few enzymes, i. e., Escherichia coli and Salmonella BCATs, which are homohexamers arranged as a double trimer, the class IV PLPDEs are homodimers. Homodimer formation is required for catalytic activity.
Probab=100.00 E-value=1.8e-48 Score=381.19 Aligned_cols=250 Identities=45% Similarity=0.680 Sum_probs=218.1
Q ss_pred CccccccceEEEEEEEEEeCCCeEeecChHhHHHHHHHHHhhcCCCC-CCHHHHHHHHHHHHHHcCCcCCCCCCcceEEE
Q 012487 176 SGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPS-PTIEQFVDAVKHTVVANKQWVPPPGKGSLYIR 254 (462)
Q Consensus 176 d~~l~YG~gvFEgmkay~~~dG~i~lFr~d~Hl~RL~~SA~~L~mp~-~~~e~l~~~I~~lv~~n~~~vP~~~~g~lyIR 254 (462)
|++|+||||+|||||++ +|+ +|++++|++||.+||+.|+|+. ++.+.+.+.+.++++.+.. ...+||
T Consensus 1 drg~~~GdgvFEt~r~~---~g~--~~~l~~Hl~RL~~sa~~l~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~ir 68 (256)
T cd00449 1 DRGLHYGDGVFEGLRAG---KGR--LFRLDEHLDRLNRSAKRLGLPIPYDREELREALKELVAANNG-------ASLYIR 68 (256)
T ss_pred CceeeccceEEEEEEEc---CcE--EEChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCCC-------CCEEEE
Confidence 68999999999999997 677 6778999999999999999994 5899999999999987642 467999
Q ss_pred EEEeccCCcccccC--CCCcEEEEEEeccCCC---CCCceeEEEeeeeeecCCCCCCCCCcccccccchHHHHHHHHCCC
Q 012487 255 PLLMGSGPVLGATP--APDYTFLAFASPVGNY---HKGYLNLVVEEKFYRAFPGGTGGVKAIVNYSTVFKPVAEAKAKGF 329 (462)
Q Consensus 255 p~~~g~~~~lGv~p--~~~~~~~I~~~P~~~y---~~~~v~l~i~~~~~Ra~p~g~g~~Kt~gNYa~~l~a~~eA~~~G~ 329 (462)
+.++++...+|+.+ ...+.+++++.|++++ +.+|+++.+++....+.+..+.++|+. ||+.++++.++|+++|+
T Consensus 69 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~Kt~-~~~~~~~a~~~a~~~g~ 147 (256)
T cd00449 69 PLLTRGVGGLGVAPPPSPEPTFVVFASPVGAYAKGGEKGVRLITSPDRRRAAPGGTGDAKTG-GNLNSVLAKQEAAEAGA 147 (256)
T ss_pred EEEEecccccCCCCCCCCCcEEEEEEeeccccccccCCCeEEEEeeeEEeCCCCCCccchhh-CCHHHHHHHHHHHHcCC
Confidence 98886655567653 3567888988888764 237999998875433356678999998 78999999999999999
Q ss_pred CeEEEEeccCCCEEEeeCceeEEEEeCCEEEccCCCCCCccchHHHHHHHHHHHcCCcEEEEEeChhhhhccceeEEEec
Q 012487 330 SDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATDGTILPGITRKSVIEIAQILGYQVEERAVAVEELFDSEEVFCTGT 409 (462)
Q Consensus 330 ddvL~LD~~~~g~V~E~stsNiF~v~~~~liTPpLs~~ILpGITR~siLela~~~G~~V~Er~I~~~eL~~adEvF~tgT 409 (462)
||+||+|. +|+|+|++++|||++++++|+||+++.|+|+||||+.||++|+++|++|+|+.++++||.+|||+|+|||
T Consensus 148 de~llld~--~g~v~E~s~sNlf~~~~~~l~TP~~~~g~L~GitR~~vl~~~~~~g~~v~e~~i~~~dL~~adevfl~ns 225 (256)
T cd00449 148 DEALLLDD--NGYVTEGSASNVFIVKDGELVTPPLDGGILPGITRDSVIELAKELGIKVEERPISLDELYAADEVFLTGT 225 (256)
T ss_pred CEEEEECC--CCcEEEcCceEEEEEECCEEEeCCCCCCcCcchhHHHHHHHHHHcCCeEEEEecCHHHHhhCCEEEEccc
Confidence 99999996 6999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEeEEEEECCeEEEcCCCchHHHHHHHHHH
Q 012487 410 AMVVNPVNSITYQGKRIEYKTGPETVAQKLYEML 443 (462)
Q Consensus 410 a~gI~PV~~I~~~~~~i~~~~~~gp~t~~L~~~l 443 (462)
+++|+||.+| +++.+ ..+.+||++++|+++|
T Consensus 226 ~~gv~pV~~i--~~~~~-~~~~~~~~~~~l~~~~ 256 (256)
T cd00449 226 AAEVTPVTEI--DGRGI-GDGKPGPVTRKLRELL 256 (256)
T ss_pred cceEEEEEEE--CCeec-CCCCCCHHHHHHHHhC
Confidence 9999999999 46655 2346899999998764
No 26
>cd01559 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate. Based on the information available from the crystal structure, most members of this subgroup are likely to function as dimers. The enzyme from E.Coli, the structure of which is available, is a homodimer that is folded into a small and a larger domain. The coenzyme pyridoxal 5; -phosphate resides at the interface of the two domains that is linked by a flexible loop. Members of this subgroup are found in Eukaryotes and bacteria.
Probab=100.00 E-value=1.6e-48 Score=381.75 Aligned_cols=246 Identities=31% Similarity=0.481 Sum_probs=214.9
Q ss_pred CccccccceEEEEEEEEEeCCCeEeecChHhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHcCCcCCCCCCcceEEEE
Q 012487 176 SGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSPTIEQFVDAVKHTVVANKQWVPPPGKGSLYIRP 255 (462)
Q Consensus 176 d~~l~YG~gvFEgmkay~~~dG~i~lFr~d~Hl~RL~~SA~~L~mp~~~~e~l~~~I~~lv~~n~~~vP~~~~g~lyIRp 255 (462)
|++|+||||+|||||+| +|+ +|++++|++||.+||++|+|+.++.+.+.+.|.++++.+.. ...+||+
T Consensus 1 Drg~~~GdgvFEt~~~~---~g~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~l~~~i~~~i~~~~~-------~~~~ir~ 68 (249)
T cd01559 1 DRGFAYGDGVFETMRAL---DGR--LFLLDAHLARLERSARRLGIPEPDLPRLRAALESLLAANDI-------DEGRIRL 68 (249)
T ss_pred CCcccccceeEEEEEEE---CCE--EccHHHHHHHHHHHHHhcCcCCCCHHHHHHHHHHHHHhCCC-------CceEEEE
Confidence 68999999999999998 677 67899999999999999999955899999999999998753 3568998
Q ss_pred EEeccCCcccccC--CCCcEEEEEEeccCC-CCCCceeEEEeeeeeecCCCCCCCCCcccccccchHHHHHHHHCCCCeE
Q 012487 256 LLMGSGPVLGATP--APDYTFLAFASPVGN-YHKGYLNLVVEEKFYRAFPGGTGGVKAIVNYSTVFKPVAEAKAKGFSDV 332 (462)
Q Consensus 256 ~~~g~~~~lGv~p--~~~~~~~I~~~P~~~-y~~~~v~l~i~~~~~Ra~p~g~g~~Kt~gNYa~~l~a~~eA~~~G~ddv 332 (462)
++..+....|+.+ ..++.++|.+.|.++ .+.+|+++.+++ +.|..+..++++|+. ||+.+++++++|+++|+||+
T Consensus 69 ~v~rg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~gv~l~~~~-~~~~~~~~~~~~Kt~-ny~~~~~a~~~a~~~g~de~ 146 (249)
T cd01559 69 ILSRGPGGRGYAPSVCPGPALYVSVIPLPPAWRQDGVRLITCP-VRLGEQPLLAGLKHL-NYLENVLAKREARDRGADEA 146 (249)
T ss_pred EEecCCCCCCCCCCCCCCCEEEEEeccCCHHHHhCCcEEEEcc-cccCCCCCCCCcchh-hhHHHHHHHHHHHhcCCCEE
Confidence 8875444445543 345678888888754 223789998875 566677789999996 99999999999999999999
Q ss_pred EEEeccCCCEEEeeCceeEEEEeCCEEEccCCCCCCccchHHHHHHHHHHHcCCcEEEEEeChhhhhccceeEEEecccc
Q 012487 333 LFLDVKTAKYIEEVSTSNIFFLKGNVISTPATDGTILPGITRKSVIEIAQILGYQVEERAVAVEELFDSEEVFCTGTAMV 412 (462)
Q Consensus 333 L~LD~~~~g~V~E~stsNiF~v~~~~liTPpLs~~ILpGITR~siLela~~~G~~V~Er~I~~~eL~~adEvF~tgTa~g 412 (462)
||+|. +|+|+|++++|||++++++|+||+++.++|+||||+.|+++++++|++|+|+.|+++||.+|||+|+|||+++
T Consensus 147 l~l~~--~g~v~E~~~~Nif~~~~~~~~TP~~~~g~L~Gitr~~~l~~~~~~g~~v~e~~i~~~el~~ade~~~~ns~~g 224 (249)
T cd01559 147 LFLDT--DGRVIEGTASNLFFVKDGELVTPSLDRGGLAGITRQRVIELAAAKGYAVDERPLRLEDLLAADEAFLTNSLLG 224 (249)
T ss_pred EEEcC--CCCEEEecceEEEEEECCEEECCCcccCccccHHHHHHHHHHHHcCceEEEEecCHHHHhhCCEEEEecCccc
Confidence 99996 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeEEEEECCeEEEcCCCchHHHHHHHHHH
Q 012487 413 VNPVNSITYQGKRIEYKTGPETVAQKLYEML 443 (462)
Q Consensus 413 I~PV~~I~~~~~~i~~~~~~gp~t~~L~~~l 443 (462)
|+||.+|+ +. .+.+||++++|++.|
T Consensus 225 i~pV~~id--~~----~~~~~~~~~~l~~~~ 249 (249)
T cd01559 225 VAPVTAID--DH----DGPPGPLTRALRELL 249 (249)
T ss_pred eeEEEEEC--Cc----ccCccHHHHHHHHhC
Confidence 99999994 42 335799999998764
No 27
>PRK09266 hypothetical protein; Provisional
Probab=100.00 E-value=1e-46 Score=372.76 Aligned_cols=256 Identities=18% Similarity=0.182 Sum_probs=217.2
Q ss_pred ceeecCeeccCCcceeCCCCccccccceEEEEEEEEEeCCCeEeecChHhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHH
Q 012487 157 KNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSPTIEQFVDAVKHTV 236 (462)
Q Consensus 157 ~~W~ng~ivp~~~~~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr~d~Hl~RL~~SA~~L~mp~~~~e~l~~~I~~lv 236 (462)
..|.||+++|..++. .+++||||+||||+++ +|+ +|++++|++||.+||++|+++.++.+.+.+.+.+++
T Consensus 4 ~~~~nG~~~~~~~a~-----~~~~~GdgvFETir~~---~g~--~~~l~~Hl~RL~~sa~~l~~~~~~~~~l~~~l~~~~ 73 (266)
T PRK09266 4 LIELNGRPATAEDLA-----ALALANYGHFTSMQVR---DGR--VRGLDLHLQRLRRASRELFGAALDDDRVRAQLRAAL 73 (266)
T ss_pred EEEECCEECCHHHhh-----hHhhccceEEEEEEEE---CCE--EcCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 469999999998876 4999999999999998 677 677999999999999999776568999999999998
Q ss_pred HHcCCcCCCCCCcceEEEEEEeccCCcccccCC-CCcEEEEEEeccCCCCCCceeEEEeeeeeecCCCCCCCCCcccccc
Q 012487 237 VANKQWVPPPGKGSLYIRPLLMGSGPVLGATPA-PDYTFLAFASPVGNYHKGYLNLVVEEKFYRAFPGGTGGVKAIVNYS 315 (462)
Q Consensus 237 ~~n~~~vP~~~~g~lyIRp~~~g~~~~lGv~p~-~~~~~~I~~~P~~~y~~~~v~l~i~~~~~Ra~p~g~g~~Kt~gNYa 315 (462)
+. . ....|||+.+.++.+.+|+.+. ..+.+++++.|..++..+++++.+++ +.|.. ..+|+. ||.
T Consensus 74 ~~-~-------~~~~~ir~~v~r~~g~~~~~~~~~~~~~~i~~~~~~~~~~~~v~l~~~~-~~r~~----~~~K~~-~~l 139 (266)
T PRK09266 74 AA-G-------PADASVRVTVFAPDFDFRNPLADVAPDVLVATSPPADGPAGPLRLQSVP-YEREL----PHIKHV-GTF 139 (266)
T ss_pred hc-C-------CCcEEEEEEEEecCcccCCCCCCCCceEEEEEecCCcCCCCCeEEEEEE-ecccC----CCCCCC-CcH
Confidence 43 2 1367999988754444565332 45677888888665545789888775 45543 479998 788
Q ss_pred cchHHHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEEeCCEEEccCCCCCCccchHHHHHHHHHHHcCCcEEEEEeCh
Q 012487 316 TVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATDGTILPGITRKSVIEIAQILGYQVEERAVAV 395 (462)
Q Consensus 316 ~~l~a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v~~~~liTPpLs~~ILpGITR~siLela~~~G~~V~Er~I~~ 395 (462)
.+++++++|+++|+||+||+|. +|+|+|++++|||++++++|+||++ ++|+||||+.|+++++++|++|+|+.|++
T Consensus 140 ~~vla~~~a~~~g~de~l~ln~--~g~v~E~~~sNlf~v~~~~l~TP~~--~~L~GItR~~ll~~~~~~g~~v~e~~i~~ 215 (266)
T PRK09266 140 GQLHLRRLAQRAGFDDALFVDP--DGRVSEGATWNLGFWDGGAVVWPQA--PALPGVTMALLQRGLERLGIPQRTRPVTL 215 (266)
T ss_pred HHHHHHHHHHHcCCCeEEEEcC--CCcEEEcCceEEEEEECCEEECCCC--CccchHHHHHHHHHHHHcCCeeEEEECCH
Confidence 8999999999999999999996 7999999999999999999999994 79999999999999999999999999999
Q ss_pred hhhhccceeEEEecccceEEeEEEEECCeEEEcCCCchHHHHHHHHHHHH
Q 012487 396 EELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLYEMLVG 445 (462)
Q Consensus 396 ~eL~~adEvF~tgTa~gI~PV~~I~~~~~~i~~~~~~gp~t~~L~~~l~~ 445 (462)
+||.+|||+|+|||+++|+||.+| +++.+ .. .+|++++|++.|..
T Consensus 216 ~eL~~adevfltnSl~gi~pV~~i--~~~~~--~~-~~~~~~~l~~~~~~ 260 (266)
T PRK09266 216 ADLGRFAGAFACNAWRGQRAVSAI--DDVAL--PD-SHALLELLRRAYEA 260 (266)
T ss_pred HHHHHhhHhhhhcCccceEEEEEE--CCEEC--CC-CchHHHHHHHHHHh
Confidence 999999999999999999999999 46654 21 37999999999854
No 28
>PF01063 Aminotran_4: Aminotransferase class IV; InterPro: IPR001544 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-IV, currently consists of proteins of about 270 to 415 amino-acid residues that share a few regions of sequence similarity. Surprisingly, the best conserved region does not include the lysine residue to which the pyridoxal-phosphate group is known to be attached, in ilvE, but is located some 40 residues at the C terminus side of the pyridoxal-phosphate-lysine. The D-amino acid transferases (D-AAT), which are among the members of this entry, are required by bacteria to catalyse the synthesis of D-glutamic acid and D-alanine, which are essential constituents of bacterial cell wall and are the building block for other D-amino acids. Despite the difference in the structure of the substrates, D-AATs and L-ATTs have strong similarity [, ]. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1EKV_A 2HGX_A 1EKP_A 1KTA_B 1KT8_B 2A1H_B 2HDK_A 2HGW_B 1EKF_B 2HG8_A ....
Probab=100.00 E-value=1.8e-38 Score=305.09 Aligned_cols=224 Identities=31% Similarity=0.432 Sum_probs=174.6
Q ss_pred cChHhHHHHHHHHHhhcCCCC-CCHHHHHHHHHHHHHHcCCcCCCCCCcceEEEEEEeccCCcccccCCCCcEEEEEEec
Q 012487 202 FRPEQNALRMQMGADRLRMPS-PTIEQFVDAVKHTVVANKQWVPPPGKGSLYIRPLLMGSGPVLGATPAPDYTFLAFASP 280 (462)
Q Consensus 202 Fr~d~Hl~RL~~SA~~L~mp~-~~~e~l~~~I~~lv~~n~~~vP~~~~g~lyIRp~~~g~~~~lGv~p~~~~~~~I~~~P 280 (462)
|++++|++||.+||+.+ +.. ++.+.+.+.+.++++.+.. .+..|||+++++++...+..+............
T Consensus 1 f~l~~Hl~Rl~~S~~~l-~~~~~~~~~l~~~i~~~~~~~~~------~~~~~ir~~v~~g~~~~~~~~~~~~~~~~~~~~ 73 (231)
T PF01063_consen 1 FFLDEHLERLRRSARAL-IGLPFSREELREIIQELLEANPD------QGEGYIRITVTRGGGPLGGSPPENSAPPPFSIA 73 (231)
T ss_dssp ETHHHHHHHHHHHHHHT-TTHSSHHHHHHHHHHHHHHHTTS------SSSEEEEEEEEETSSSSSSSECSEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHH-ccCCcCHHHHHHHHHHHHHHcCC------CCCcEEEEEEEcCCCCcCccCcccccccccccc
Confidence 67999999999999999 433 3789999999999988761 245699999987766666665543322211111
Q ss_pred cCCCCCCceeEEEeeeeeecCCC-----CCCCCCcccccccchH-HHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEE
Q 012487 281 VGNYHKGYLNLVVEEKFYRAFPG-----GTGGVKAIVNYSTVFK-PVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFL 354 (462)
Q Consensus 281 ~~~y~~~~v~l~i~~~~~Ra~p~-----g~g~~Kt~gNYa~~l~-a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v 354 (462)
.. + ..+..........++.+. .++++|+. ||..+.+ +..+|+++|+||+|++|. +|+|+|++++|||++
T Consensus 74 ~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kt~-~~~~~~~~~~~~a~~~g~de~ll~d~--~G~v~E~~~sNif~~ 148 (231)
T PF01063_consen 74 PP-R-RPPPPLVGSVGVRRASPPLPRPNPLPRHKTT-NRLANVLAALRAAREKGADEALLLDE--DGNVTEGSTSNIFFV 148 (231)
T ss_dssp TC-H-HHHEEEEEECSEECETTTSE-TTTSTTS-BS-HHHHHHHHHHHHHHHTTSSEEEEEET--TSBEEEESSSEEEEE
T ss_pred cc-c-cCCcceeeeeeEEeccccccccCCCCCeeEC-CcchhhHHHHHHHHhcCcchhheecC--CCCcCCCCCcccccc
Confidence 11 1 122222222223333333 37899998 6777777 777777999999999996 799999999999999
Q ss_pred eCCEEEccCCCCCCccchHHHHHHHHHHHcCCcEEEEEeChhhhhccceeEEEecccceEEeEEEEECCeEEEcCCCchH
Q 012487 355 KGNVISTPATDGTILPGITRKSVIEIAQILGYQVEERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPET 434 (462)
Q Consensus 355 ~~~~liTPpLs~~ILpGITR~siLela~~~G~~V~Er~I~~~eL~~adEvF~tgTa~gI~PV~~I~~~~~~i~~~~~~gp 434 (462)
+|++|+||+++.|+|+||||+.||++++++|++|+|++++++||.+|||+|+|||+++|+||.+| +++.+ . .||
T Consensus 149 ~~~~~~TP~~~~giL~Gitr~~ll~~~~~~g~~v~e~~i~~~~L~~ade~fl~ns~~gi~pV~~i--~~~~~--~--~~p 222 (231)
T PF01063_consen 149 KDGTLYTPPLDSGILPGITRQLLLELAKELGIPVEERPITLDDLQQADEVFLTNSLRGIRPVKSI--DGRSF--G--PGP 222 (231)
T ss_dssp ETTEEEEESGSSSSB--HHHHHHHHHHHHTTSEEEEE-BBHHHHHTHSEEEEEETTTEEEEEEEE--TTEES--T--THH
T ss_pred cCCEEEcCChhhhhccHHHHHHHHHHHHhCCCCcEEEEeCHHHhhhhhheEEecchhhEEEEEEE--CCEEC--C--CCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999 57664 3 899
Q ss_pred HHHHHHHHH
Q 012487 435 VAQKLYEML 443 (462)
Q Consensus 435 ~t~~L~~~l 443 (462)
++++|+++|
T Consensus 223 ~~~~L~~~~ 231 (231)
T PF01063_consen 223 ITRRLQEAY 231 (231)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhC
Confidence 999999986
No 29
>PRK07546 hypothetical protein; Provisional
Probab=100.00 E-value=4.1e-36 Score=287.46 Aligned_cols=204 Identities=16% Similarity=0.208 Sum_probs=171.2
Q ss_pred ceEEEEEEEEEeCCCeEeecChHhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHcCCcCCCCCCcceEEEEEEeccCC
Q 012487 183 QGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSPTIEQFVDAVKHTVVANKQWVPPPGKGSLYIRPLLMGSGP 262 (462)
Q Consensus 183 ~gvFEgmkay~~~dG~i~lFr~d~Hl~RL~~SA~~L~mp~~~~e~l~~~I~~lv~~n~~~vP~~~~g~lyIRp~~~g~~~ 262 (462)
.++||||+++ ++|+ ++.+++|++||.+||+.|++|.+ .+.+.+.+.++++.+. +..+||+++..++
T Consensus 4 ~~lfETi~~~--~~G~--~~~l~~Hl~RL~~sa~~l~~~~~-~~~l~~~l~~~~~~~~--------~~~~vrl~~~~~g- 69 (209)
T PRK07546 4 FELIETLRWE--PGAG--FPRLDRHLARLERSARALGFPCD-PAAVRAKLAEAVAGAQ--------GPLRLRLTLARDG- 69 (209)
T ss_pred ccEEEEEEEe--CCCC--cccHHHHHHHHHHHHHHhCCCCC-HHHHHHHHHHHhhccC--------CCeEEEEEEcCCC-
Confidence 4799999986 2566 66789999999999999999974 6788899998887531 3578887665332
Q ss_pred cccccCCCCcEEEEEEeccCCCCC-CceeEEEeeeeeecCCCCCCCCCcccccccchHHHHHHHHCCCCeEEEEeccCCC
Q 012487 263 VLGATPAPDYTFLAFASPVGNYHK-GYLNLVVEEKFYRAFPGGTGGVKAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAK 341 (462)
Q Consensus 263 ~lGv~p~~~~~~~I~~~P~~~y~~-~~v~l~i~~~~~Ra~p~g~g~~Kt~gNYa~~l~a~~eA~~~G~ddvL~LD~~~~g 341 (462)
.+.+...|+++... +++++.+.+ ..+..+..+..+|+. ||+.+++++++|+++|+||+|++|. +|
T Consensus 70 ----------~~~i~~~p~~~~~~~~~~~l~~~~-~~~~~~~~~~~~Kt~-nr~~~v~a~~~a~~~g~de~l~l~~--~G 135 (209)
T PRK07546 70 ----------RLTVETAPLPPLPPDTVWRVAIAR-TRLDSADPLLRYKTT-RRAAYDAARAELPPAEADEVILLNE--RG 135 (209)
T ss_pred ----------CEEEEEecCCCCCCCCcEEEEEcC-cccCCCCcchhcccC-ChHHHHHHHHHHhhCCCCEEEEECC--CC
Confidence 25677777764332 456776654 344555567789997 9999999999999999999999996 79
Q ss_pred EEEeeCceeEEEEeCCEEE-ccCCCCCCccchHHHHHHHHHHHcCCcEEEEEeChhhhhccceeEEEecccceEEeEEE
Q 012487 342 YIEEVSTSNIFFLKGNVIS-TPATDGTILPGITRKSVIEIAQILGYQVEERAVAVEELFDSEEVFCTGTAMVVNPVNSI 419 (462)
Q Consensus 342 ~V~E~stsNiF~v~~~~li-TPpLs~~ILpGITR~siLela~~~G~~V~Er~I~~~eL~~adEvF~tgTa~gI~PV~~I 419 (462)
+|+|++++||||+++++|+ ||+++.|+|+||||+.+++. .+|+|+.|+++||.+|||+|+|||++||+||..|
T Consensus 136 ~v~E~s~~Ni~~~~~~~~~~TP~~~~g~L~Gi~R~~ll~~-----~~v~e~~i~~~~L~~adevfl~NSl~gv~pV~~~ 209 (209)
T PRK07546 136 EVCEGTITNVFLDRGGGMLTTPPLSCGLLPGVLRAELLDA-----GRAREAVLTVDDLKSARAIWVGNSLRGLIRAELI 209 (209)
T ss_pred cEEEcCceeEEEEECCEEEECCCCcCCCCccHHHHHHHhh-----CCeEEEEcCHHHHhhCCEEEEEccceeEEEEEEC
Confidence 9999999999999999999 99999999999999999985 5899999999999999999999999999999865
No 30
>PRK07101 hypothetical protein; Provisional
Probab=99.96 E-value=3.1e-28 Score=229.83 Aligned_cols=183 Identities=16% Similarity=0.207 Sum_probs=140.4
Q ss_pred ceEEEEEEEEEeCCCeEeecChHhHHHHHHHHHhhcCCCC-C-CHHHHHHHHHHHHHHcCCcCCCCCCcceEEEEEEecc
Q 012487 183 QGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPS-P-TIEQFVDAVKHTVVANKQWVPPPGKGSLYIRPLLMGS 260 (462)
Q Consensus 183 ~gvFEgmkay~~~dG~i~lFr~d~Hl~RL~~SA~~L~mp~-~-~~e~l~~~I~~lv~~n~~~vP~~~~g~lyIRp~~~g~ 260 (462)
.++||||+++ +|+ ++++++|++||.+||+.+++.. + +.+.+.+.+.++ . .+..++|++. +.
T Consensus 3 ~~l~ETir~~---~g~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~~~~~~~~~~----~-------~~~~r~rl~~-~~ 65 (187)
T PRK07101 3 FPLFETIAIE---DGE--IQNLSYHQQRYERTLAEFYGKEAPFDLAEIIQPPTEL----Q-------EGLVRCRIDY-NA 65 (187)
T ss_pred CcceEEEeee---CCe--eccHHHHHHHHHHHHHHHcccCCcccHHHHhhchhhh----c-------CCCEEEEEEe-cC
Confidence 4699999998 677 6789999999999999998854 2 667777766543 1 2457888765 54
Q ss_pred CCcccccCCCCcEEEEEEeccCCCCCCceeEEEeeeeeecCCCCCCCCCcccccccchHHHHHHHHCCCCeEEEEeccCC
Q 012487 261 GPVLGATPAPDYTFLAFASPVGNYHKGYLNLVVEEKFYRAFPGGTGGVKAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTA 340 (462)
Q Consensus 261 ~~~lGv~p~~~~~~~I~~~P~~~y~~~~v~l~i~~~~~Ra~p~g~g~~Kt~gNYa~~l~a~~eA~~~G~ddvL~LD~~~~ 340 (462)
+. +-+...|+.+...+++++...++ ..-.+|+. ||. .+....|++.|+||+|++| +
T Consensus 66 g~-----------~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~Kt~-~r~--~~~~~~a~~~g~de~l~~~---~ 121 (187)
T PRK07101 66 EI-----------YQVQYFPYQRRPIRSFQPVYCDD-------IDYSLKYT-DRS--ALNELFAQKGECDEIIIIK---N 121 (187)
T ss_pred Cc-----------EEEEEEcCCCCCcCceEEEecCC-------cccccccC-CHH--HHHHHHHHhCCCCEEEEEc---C
Confidence 32 23344444332224666543322 23378997 432 3445556778999999997 5
Q ss_pred CEEEeeCceeEEEEeCCEEEccCCCCCCccchHHHHHHHHHHHcCCcEEEEEeChhhhhccceeEEEecccce
Q 012487 341 KYIEEVSTSNIFFLKGNVISTPATDGTILPGITRKSVIEIAQILGYQVEERAVAVEELFDSEEVFCTGTAMVV 413 (462)
Q Consensus 341 g~V~E~stsNiF~v~~~~liTPpLs~~ILpGITR~siLela~~~G~~V~Er~I~~~eL~~adEvF~tgTa~gI 413 (462)
|+|+|++++|||++++++|+||+ .++|+||||+.+|+. | +|+|+.|+++||.+|||+|+|||++|+
T Consensus 122 G~v~E~~~sNi~~~~~~~~~TP~--~~~L~Gi~R~~ll~~----~-~v~e~~i~~~~L~~ad~~~~~nsl~G~ 187 (187)
T PRK07101 122 GLVTDTSIGNLAFFDGKQWFTPK--KPLLKGTQRARLLDE----G-KIKEKDITVEDLLQYEEIRLINAMNGF 187 (187)
T ss_pred CEEEEccceEEEEEECCEEEcCC--CCCccHHHHHHHHcc----C-CEEEEecCHHHHhcCCEEEEEecccCC
Confidence 99999999999999999999999 489999999999984 6 899999999999999999999999874
No 31
>PF15507 DUF4649: Domain of unknown function (DUF4649)
Probab=66.45 E-value=9.1 Score=31.02 Aligned_cols=54 Identities=22% Similarity=0.230 Sum_probs=40.8
Q ss_pred EEEEeChhhhhccc-eeEEE-ecccceEEeEEEEECCeEEEcCCCchHHHHHHHHH
Q 012487 389 EERAVAVEELFDSE-EVFCT-GTAMVVNPVNSITYQGKRIEYKTGPETVAQKLYEM 442 (462)
Q Consensus 389 ~Er~I~~~eL~~ad-EvF~t-gTa~gI~PV~~I~~~~~~i~~~~~~gp~t~~L~~~ 442 (462)
.||.++.++..++. .-.+| -|..--.||.++.++|+.+.+.|..|.+...|.+.
T Consensus 11 ~Er~~~fe~~~ef~~s~~~C~vtipD~~~V~svt~~G~~ldy~G~~GdLY~~L~k~ 66 (72)
T PF15507_consen 11 QERTQTFEDYNEFMRSQSGCIVTIPDYYPVTSVTYNGQDLDYQGTYGDLYFFLMKQ 66 (72)
T ss_pred eEEEEEeCCHHHHHHHhccCcccCCCceEEEEEEECCEEeccccchhHHHHHHHHh
Confidence 57777776665542 22344 67888899999999999998888888888777653
No 32
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=35.82 E-value=1e+02 Score=25.46 Aligned_cols=67 Identities=19% Similarity=0.227 Sum_probs=45.9
Q ss_pred HHHHHHHHcCCcEEEEEeChhhhhccceeEEEecccceEEeEEEEECCeEEEcCCC-chHHHHHHHHHH
Q 012487 376 SVIEIAQILGYQVEERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTG-PETVAQKLYEML 443 (462)
Q Consensus 376 siLela~~~G~~V~Er~I~~~eL~~adEvF~tgTa~gI~PV~~I~~~~~~i~~~~~-~gp~t~~L~~~l 443 (462)
-|-+.+++.|++|..-. .-+++..+|.+.++|--..++-+.....+.-.|.-.|. +.++++.|.+.|
T Consensus 12 ~v~~~L~~~GyeVv~l~-~~~~~~~~daiVvtG~~~n~mg~~d~~~~~pVInA~G~T~eEI~~~v~~rl 79 (80)
T PF03698_consen 12 NVKEALREKGYEVVDLE-NEQDLQNVDAIVVTGQDTNMMGIQDTSTKVPVINASGLTAEEIVQEVEERL 79 (80)
T ss_pred HHHHHHHHCCCEEEecC-CccccCCcCEEEEECCCcccccccccccCceEEecCCCCHHHHHHHHHHhh
Confidence 45567888899887554 33457889999999988888777655433333332343 678888887765
No 33
>PRK03094 hypothetical protein; Provisional
Probab=30.55 E-value=1.6e+02 Score=24.36 Aligned_cols=66 Identities=17% Similarity=0.188 Sum_probs=45.5
Q ss_pred HHHHHHHcCCcEEEEEeChhhhhccceeEEEecccceEEeEEEEECCeEEEcCCC-chHHHHHHHHHH
Q 012487 377 VIEIAQILGYQVEERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTG-PETVAQKLYEML 443 (462)
Q Consensus 377 iLela~~~G~~V~Er~I~~~eL~~adEvF~tgTa~gI~PV~~I~~~~~~i~~~~~-~gp~t~~L~~~l 443 (462)
|-+.+++.|++|..-. +..++..+|.+.+||--..++.+....++.-.|.-.|. +.++++.|.+.|
T Consensus 13 i~~~L~~~GYeVv~l~-~~~~~~~~Da~VitG~d~n~mgi~d~~t~~pVI~A~G~TaeEI~~~ve~r~ 79 (80)
T PRK03094 13 VQQALKQKGYEVVQLR-SEQDAQGCDCCVVTGQDSNVMGIADTSTKGSVITASGLTADEICQQVESRL 79 (80)
T ss_pred HHHHHHHCCCEEEecC-cccccCCcCEEEEeCCCcceecccccccCCcEEEcCCCCHHHHHHHHHHhh
Confidence 5567888899886432 22446778999999999999888876544333332343 678888887665
No 34
>PF13051 DUF3912: Protein of unknown function (DUF3912)
Probab=23.46 E-value=71 Score=24.83 Aligned_cols=39 Identities=15% Similarity=0.135 Sum_probs=32.3
Q ss_pred CceeEEEEeCCEEEccCCCCCCccchHHHHHHHHHHHcC
Q 012487 347 STSNIFFLKGNVISTPATDGTILPGITRKSVIEIAQILG 385 (462)
Q Consensus 347 stsNiF~v~~~~liTPpLs~~ILpGITR~siLela~~~G 385 (462)
.-++++++.+++.+--.|.+-+|-||--...-++|++.|
T Consensus 30 ~~~~f~ivi~~q~i~velkdivlvgvdvgqfh~wceqng 68 (68)
T PF13051_consen 30 LESHFAIVIGEQSIDVELKDIVLVGVDVGQFHEWCEQNG 68 (68)
T ss_pred cCCcEEEEECCeEEEEEeeeEEEEEecHHHHHHHHhhCC
Confidence 346788888998888888888999999888888887654
Done!