BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012488
(462 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224119074|ref|XP_002317979.1| predicted protein [Populus trichocarpa]
gi|118487707|gb|ABK95678.1| unknown [Populus trichocarpa]
gi|222858652|gb|EEE96199.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/467 (86%), Positives = 430/467 (92%), Gaps = 7/467 (1%)
Query: 2 ASMALKSFTGLRQSPQEQQ---HPHFIAQALPRQQKFRVSAAKTSPKLTNRNLRVAVIGG 58
+S+ KSFTGLR S QE H H + ++FR++A+K+SPKL NRNLRVAVIGG
Sbjct: 3 SSIVFKSFTGLRHSSQEHPKVLHSHTNPISSFSYRRFRITASKSSPKLQNRNLRVAVIGG 62
Query: 59 GPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMI 118
GPAGGAAAETLAK G+ET+LIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR+VTKMKMI
Sbjct: 63 GPAGGAAAETLAKGGIETYLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKMI 122
Query: 119 SPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPR----NF 174
SPSNVAVDIG+TLKPHEYIGMVRREVLDAYLRERA NGA VINGLF+KMD+P+ N
Sbjct: 123 SPSNVAVDIGRTLKPHEYIGMVRREVLDAYLRERASTNGAKVINGLFLKMDIPKKGSENI 182
Query: 175 EQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKI 234
PYVL+YTEYDG KGG GE++TLEVD VIGADGANSRVAKSI+AGDYDYAIAFQER+KI
Sbjct: 183 NSPYVLHYTEYDGKKGGTGERKTLEVDVVIGADGANSRVAKSIDAGDYDYAIAFQERIKI 242
Query: 235 PDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAK 294
P +KMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRA+
Sbjct: 243 PSDKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAR 302
Query: 295 DKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEA 354
DKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEA
Sbjct: 303 DKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEA 362
Query: 355 IIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEY 414
I+EGS NG RM+DE DLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEY
Sbjct: 363 IVEGSGNGKRMVDESDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEY 422
Query: 415 VQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLT 461
VQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKL+
Sbjct: 423 VQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLS 469
>gi|449440790|ref|XP_004138167.1| PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic-like
[Cucumis sativus]
gi|449477252|ref|XP_004154972.1| PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic-like
[Cucumis sativus]
Length = 465
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/467 (86%), Positives = 437/467 (93%), Gaps = 7/467 (1%)
Query: 1 MASMALKSFTGLRQSPQEQQHPHFIAQALPRQ-----QKFRVSAAKTSPKLTNRNLRVAV 55
MAS+ALKSFTGLRQS E+ PHFI Q Q ++F V+AAKTSPK+ RNLRVAV
Sbjct: 1 MASVALKSFTGLRQSSTEK--PHFITQTKANQNPQFRRRFYVAAAKTSPKIAGRNLRVAV 58
Query: 56 IGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKM 115
+GGGPAGG+AAETLA+ GVETFL ERKLDNCKPCGGAIPLCMVGEFDLPLD+IDR+VTKM
Sbjct: 59 VGGGPAGGSAAETLARGGVETFLFERKLDNCKPCGGAIPLCMVGEFDLPLDLIDRRVTKM 118
Query: 116 KMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFE 175
KMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLR+RA +NGA+VINGL MK++LP+N
Sbjct: 119 KMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRDRAAENGANVINGLVMKLELPKNQN 178
Query: 176 QPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIP 235
PYVL+YT YDG KGGVGEK TLEVDAVIGADGANSRVAK+I+AGDYDYAIAFQER+KIP
Sbjct: 179 APYVLHYTAYDGKKGGVGEKMTLEVDAVIGADGANSRVAKAIDAGDYDYAIAFQERIKIP 238
Query: 236 DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKD 295
D+KMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHK DIKKFQ+ATRNRAKD
Sbjct: 239 DDKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKADIKKFQIATRNRAKD 298
Query: 296 KILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
KILGGKIIRVEAHPIPEHPRPRRL+GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI
Sbjct: 299 KILGGKIIRVEAHPIPEHPRPRRLAGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 358
Query: 356 IEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYV 415
+EGSENG RM++E DLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYV
Sbjct: 359 VEGSENGKRMVEESDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYV 418
Query: 416 QKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
QKMTFDSYLYK+VVPGNPL+DLKLAVNTIGSLVRANAL+REM+K+++
Sbjct: 419 QKMTFDSYLYKKVVPGNPLDDLKLAVNTIGSLVRANALKREMEKVSL 465
>gi|356562846|ref|XP_003549679.1| PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic-like
[Glycine max]
Length = 462
Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/464 (86%), Positives = 431/464 (92%), Gaps = 4/464 (0%)
Query: 1 MASMALKSFTGLRQSPQEQQHPHFIAQALPR--QQKFRVSAAKTSPKLTNRNLRVAVIGG 58
M S+A KSF GLRQS E PHF AQ+ P +KFRV A K SP+L RNLRVAV+GG
Sbjct: 1 MNSIAFKSFVGLRQSSPEA--PHFAAQSRPATPHRKFRVVAGKFSPRLNGRNLRVAVVGG 58
Query: 59 GPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMI 118
GPAGGAAAETLAK GVETFLIERK+DNCKPCGGAIPLCMVGEFDLPLDIIDR+VTKMKMI
Sbjct: 59 GPAGGAAAETLAKGGVETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKMI 118
Query: 119 SPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPY 178
SPSNVAVDIG+TLKPHEYIGMVRREVLDAYLR+RA++NGA+VINGLF+KMD+P++ PY
Sbjct: 119 SPSNVAVDIGRTLKPHEYIGMVRREVLDAYLRDRAKENGANVINGLFLKMDIPKDNNSPY 178
Query: 179 VLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEK 238
VL+Y+ YDG G GEKRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQERV+IPD+K
Sbjct: 179 VLHYSSYDGKTNGAGEKRTLEVDAVIGADGANSRVAKSIDAGDYEYAIAFQERVRIPDDK 238
Query: 239 MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKIL 298
MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATR RA+DKIL
Sbjct: 239 MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRKRAEDKIL 298
Query: 299 GGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEG 358
GGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+EG
Sbjct: 299 GGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEG 358
Query: 359 SENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKM 418
SENG RM++EGDLRKYLEKWDKTYWPTYKVLD+LQKVFYRSNPAREAFVEMCADEYVQKM
Sbjct: 359 SENGKRMVEEGDLRKYLEKWDKTYWPTYKVLDILQKVFYRSNPAREAFVEMCADEYVQKM 418
Query: 419 TFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
TFDSYLYK VVPGNPLEDLKLA+NTIGSLVRANA+RREM KL +
Sbjct: 419 TFDSYLYKTVVPGNPLEDLKLAINTIGSLVRANAIRREMKKLNV 462
>gi|19749359|gb|AAD28640.2| geranylgeranyl hydrogenase [Glycine max]
Length = 462
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/464 (86%), Positives = 430/464 (92%), Gaps = 4/464 (0%)
Query: 1 MASMALKSFTGLRQSPQEQQHPHFIAQALPR--QQKFRVSAAKTSPKLTNRNLRVAVIGG 58
M S+A KSF GLRQS E PHF AQ P +KFRV A K SPKL RNLRVAV+GG
Sbjct: 1 MNSIAFKSFVGLRQSSPEA--PHFAAQPRPATPHRKFRVLAGKFSPKLNGRNLRVAVVGG 58
Query: 59 GPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMI 118
GPAGGAAAETLAK GVETFLIERK+DNCKPCGGAIPLCMVGEFDLPLDIIDR+VTKMKMI
Sbjct: 59 GPAGGAAAETLAKGGVETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKMI 118
Query: 119 SPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPY 178
SPSNVAVDIG+TLKPHEYIGMVRREVLDAYLR+RA++ GA+VINGLF+KMD+P++ PY
Sbjct: 119 SPSNVAVDIGRTLKPHEYIGMVRREVLDAYLRDRAKEYGANVINGLFLKMDIPKDKNSPY 178
Query: 179 VLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEK 238
VL+Y+ YDG GVGEKRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQERVKIPD+K
Sbjct: 179 VLHYSSYDGKTNGVGEKRTLEVDAVIGADGANSRVAKSIDAGDYEYAIAFQERVKIPDDK 238
Query: 239 MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKIL 298
MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATR RA+DKIL
Sbjct: 239 MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRKRAEDKIL 298
Query: 299 GGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEG 358
GGKIIRVEAHPIPEHPRPRRL GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+EG
Sbjct: 299 GGKIIRVEAHPIPEHPRPRRLLGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEG 358
Query: 359 SENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKM 418
SENG RM++EGDLRKYLEKWDKTYWPTYKVLD+LQKVFYRSNPAREAFVEMCADEYVQKM
Sbjct: 359 SENGKRMVEEGDLRKYLEKWDKTYWPTYKVLDILQKVFYRSNPAREAFVEMCADEYVQKM 418
Query: 419 TFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
TFDSYLYK VVPGNPLEDLKLA+NTIGSLVRANA+RREM+KL +
Sbjct: 419 TFDSYLYKTVVPGNPLEDLKLAINTIGSLVRANAIRREMNKLNV 462
>gi|356512135|ref|XP_003524776.1| PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic-like
[Glycine max]
Length = 462
Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/464 (86%), Positives = 429/464 (92%), Gaps = 4/464 (0%)
Query: 1 MASMALKSFTGLRQSPQEQQHPHFIAQALPR--QQKFRVSAAKTSPKLTNRNLRVAVIGG 58
M S+A KSF GLRQS E PHF AQ P +KFRV A K SPKL RNLRVAV+GG
Sbjct: 1 MNSIAFKSFVGLRQSSPEA--PHFAAQPRPATPHRKFRVLAGKFSPKLNGRNLRVAVVGG 58
Query: 59 GPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMI 118
GPAGGAAAETLAK GVETFLIERK+DNCKPCGGAIPLCMVGEFDLPLDIIDR+VTKMKMI
Sbjct: 59 GPAGGAAAETLAKGGVETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKMI 118
Query: 119 SPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPY 178
SPSNVAVDIG+TLKPHEYIGMVRREVLDAYLR+RA++ GA+VINGLF+KMD+P++ PY
Sbjct: 119 SPSNVAVDIGRTLKPHEYIGMVRREVLDAYLRDRAKEYGANVINGLFLKMDIPKDKNSPY 178
Query: 179 VLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEK 238
VL+Y+ YDG G GEKRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQERVKIPD+K
Sbjct: 179 VLHYSSYDGKTNGAGEKRTLEVDAVIGADGANSRVAKSIDAGDYEYAIAFQERVKIPDDK 238
Query: 239 MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKIL 298
MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATR RA+DKIL
Sbjct: 239 MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRKRAEDKIL 298
Query: 299 GGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEG 358
GGKIIRVEAHPIPEHPRPRRL GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+EG
Sbjct: 299 GGKIIRVEAHPIPEHPRPRRLLGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEG 358
Query: 359 SENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKM 418
SENG RM++EGDLRKYLEKWDKTYWPTYKVLD+LQKVFYRSNPAREAFVEMCADEYVQKM
Sbjct: 359 SENGKRMVEEGDLRKYLEKWDKTYWPTYKVLDILQKVFYRSNPAREAFVEMCADEYVQKM 418
Query: 419 TFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
TFDSYLYK VVPGNPLEDLKLA+NTIGSLVRANA+RREM+KL +
Sbjct: 419 TFDSYLYKTVVPGNPLEDLKLAINTIGSLVRANAIRREMNKLNV 462
>gi|225457405|ref|XP_002284906.1| PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic
[Vitis vinifera]
Length = 467
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/469 (84%), Positives = 427/469 (91%), Gaps = 9/469 (1%)
Query: 1 MASMALKSFTGLRQSPQEQQHP-------HFIAQALPRQQKFRVSAAKTSPKLTNRNLRV 53
MAS++LK+F GLRQS + + H AQ P + R+ A K SPK+T RNLRV
Sbjct: 1 MASISLKTFVGLRQSSSDTYNSGHVFPVKHLPAQ--PASRGLRIVAGKFSPKVTGRNLRV 58
Query: 54 AVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVT 113
AV+GGGPAGG+AAETLAK G+ETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR+VT
Sbjct: 59 AVVGGGPAGGSAAETLAKGGIETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRRVT 118
Query: 114 KMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRN 173
KMKMISPSNVAVDIGQTLKPHEYIGMVRREVLD+YLRERA +GA+VINGLF+KMD P+
Sbjct: 119 KMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDSYLRERASASGATVINGLFLKMDAPKG 178
Query: 174 FEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVK 233
PYVL+YT YD GGVGE+RTLEVDAVIGADGANSRVAK I AGDYDYAIAFQER+K
Sbjct: 179 ATAPYVLHYTGYDSKTGGVGERRTLEVDAVIGADGANSRVAKFIGAGDYDYAIAFQERIK 238
Query: 234 IPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRA 293
IPD+KMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHK DIKKFQLATR RA
Sbjct: 239 IPDDKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKSDIKKFQLATRLRA 298
Query: 294 KDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAE 353
K+KILGGKIIRVEAHPIPEHPRPRRL+GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAE
Sbjct: 299 KEKILGGKIIRVEAHPIPEHPRPRRLAGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAE 358
Query: 354 AIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADE 413
AI+EGSENG RM+DEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADE
Sbjct: 359 AIVEGSENGKRMVDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADE 418
Query: 414 YVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
YVQKMTFDSYLYK+VVPGNPLEDLKLAVNTIGSLVRANALRREMDK+++
Sbjct: 419 YVQKMTFDSYLYKKVVPGNPLEDLKLAVNTIGSLVRANALRREMDKMSV 467
>gi|255547383|ref|XP_002514749.1| geranylgeranyl hydrogenase, putative [Ricinus communis]
gi|223546353|gb|EEF47855.1| geranylgeranyl hydrogenase, putative [Ricinus communis]
Length = 465
Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/463 (85%), Positives = 421/463 (90%), Gaps = 2/463 (0%)
Query: 2 ASMALKSFTGLRQSPQEQQHPHFIAQALPRQQKFRVSAAKTSPKLTNRNLRVAVIGGGPA 61
+S+ KSFTGLR S ++ +VSA+KTSPKL NRNLRVAVIGGGPA
Sbjct: 3 SSIVFKSFTGLRHSTTVDSSKTTTPLNRQHRRSLQVSASKTSPKLQNRNLRVAVIGGGPA 62
Query: 62 GGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPS 121
GGAAAETLAK G+ETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPS
Sbjct: 63 GGAAAETLAKGGIETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPS 122
Query: 122 NVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNF--EQPYV 179
N+AVDIGQTLKPHEYIGMVRREVLD+YLRERA+ NGA VINGLF+K+D+P+ PYV
Sbjct: 123 NIAVDIGQTLKPHEYIGMVRREVLDSYLRERAQSNGAKVINGLFLKLDIPKGSGNNAPYV 182
Query: 180 LYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKM 239
L+Y EYDG GG G+K+TLEVDAVIGADGANSRVAKSI AGDYDYAIAFQER+KIPD+KM
Sbjct: 183 LHYNEYDGKVGGTGQKKTLEVDAVIGADGANSRVAKSIGAGDYDYAIAFQERIKIPDDKM 242
Query: 240 VYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILG 299
VYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILG
Sbjct: 243 VYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILG 302
Query: 300 GKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGS 359
GKIIRVEAHPIPEHPRPRRL RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGS
Sbjct: 303 GKIIRVEAHPIPEHPRPRRLLDRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGS 362
Query: 360 ENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMT 419
E G RM+DE DLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMT
Sbjct: 363 EYGKRMVDEIDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMT 422
Query: 420 FDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
FDSYLYKRVVPGNPL+DLKLA NTIGSLVRANALR+EM+KL++
Sbjct: 423 FDSYLYKRVVPGNPLDDLKLAFNTIGSLVRANALRKEMNKLSV 465
>gi|297839323|ref|XP_002887543.1| hypothetical protein ARALYDRAFT_476582 [Arabidopsis lyrata subsp.
lyrata]
gi|297333384|gb|EFH63802.1| hypothetical protein ARALYDRAFT_476582 [Arabidopsis lyrata subsp.
lyrata]
Length = 467
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/467 (83%), Positives = 431/467 (92%), Gaps = 8/467 (1%)
Query: 2 ASMALKSFTGLRQSPQEQQHPHFIAQ-----ALP-RQQKFRVSAAKTSPKLTNRNLRVAV 55
++ LKSFTGLRQS EQ + F++ +LP R+ RV+A++ +PKL+NR LRVAV
Sbjct: 3 TTVTLKSFTGLRQSSTEQTN--FVSHVPSSLSLPQRRSSLRVTASRATPKLSNRKLRVAV 60
Query: 56 IGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKM 115
IGGGPAGGAAAETLA+ G+ET LIERK+DNCKPCGGAIPLCMVGEF+LPLDIIDR+VTKM
Sbjct: 61 IGGGPAGGAAAETLAQGGIETILIERKMDNCKPCGGAIPLCMVGEFNLPLDIIDRRVTKM 120
Query: 116 KMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFE 175
KMISPSN+AVDIG+TLK HEYIGMVRREVLDAYLRERAEK+GA+VINGLF+KMD P N++
Sbjct: 121 KMISPSNIAVDIGRTLKEHEYIGMVRREVLDAYLRERAEKSGATVINGLFLKMDHPENWD 180
Query: 176 QPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIP 235
PY L+YTEYDG G G K+T+EVDAVIGADGANSRVAKSI+AGDYDYAIAFQER++IP
Sbjct: 181 SPYTLHYTEYDGKTGATGTKKTMEVDAVIGADGANSRVAKSIDAGDYDYAIAFQERIRIP 240
Query: 236 DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKD 295
DEKM YYE+LAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKD
Sbjct: 241 DEKMTYYEDLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKD 300
Query: 296 KILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
KILGGKIIRVEAHPIPEHPRPRRLS RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI
Sbjct: 301 KILGGKIIRVEAHPIPEHPRPRRLSKRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 360
Query: 356 IEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYV 415
+EGS+NG +MIDEGDLRKYLEKWDKTY PTY+VLDVLQKVFYRSNPAREAFVEMCADEYV
Sbjct: 361 VEGSQNGKKMIDEGDLRKYLEKWDKTYLPTYRVLDVLQKVFYRSNPAREAFVEMCADEYV 420
Query: 416 QKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
QKMTFDSYLYKRV PG+PLED+KLAVNTIGSLVRANALRRE++KL++
Sbjct: 421 QKMTFDSYLYKRVAPGSPLEDIKLAVNTIGSLVRANALRREIEKLSV 467
>gi|219842164|dbj|BAH10639.1| geranylgeranyl reductase [Hevea brasiliensis]
Length = 471
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/469 (84%), Positives = 428/469 (91%), Gaps = 8/469 (1%)
Query: 2 ASMALKSFTGLRQS----PQEQQHPHFIAQALPRQQKFRVSAAKTSPKLTNRNLRVAVIG 57
+S+A KSFTGLR S P+ H I+ Q+ +++A +SPKL NRNLRVAVIG
Sbjct: 3 SSIAFKSFTGLRHSSAEPPKLHSQLHNISPPNYCQRHLQITAGISSPKLQNRNLRVAVIG 62
Query: 58 GGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKM 117
GGPAGGAAAETLAK G+ET+LIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKM
Sbjct: 63 GGPAGGAAAETLAKGGIETYLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKM 122
Query: 118 ISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFE-- 175
ISPSN+AVDIGQTLKPHEYIGMVRREVLD+YLRERA NGA+VINGLF+KMDLP+ +
Sbjct: 123 ISPSNIAVDIGQTLKPHEYIGMVRREVLDSYLRERAASNGANVINGLFLKMDLPKGGKGS 182
Query: 176 --QPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVK 233
PYVL+YTEY+G GG G+K+TLEVDAVIGADGANSRVAKSI AGDYDYAIAFQER++
Sbjct: 183 ETAPYVLHYTEYNGKVGGAGQKKTLEVDAVIGADGANSRVAKSIGAGDYDYAIAFQERIR 242
Query: 234 IPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRA 293
IPD+KMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRA
Sbjct: 243 IPDDKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRA 302
Query: 294 KDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAE 353
KDKILGGKIIRVEAHPIPEHPRPRRLS RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAE
Sbjct: 303 KDKILGGKIIRVEAHPIPEHPRPRRLSDRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAE 362
Query: 354 AIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADE 413
AI+EGS NG RM+DE DLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADE
Sbjct: 363 AIVEGSGNGKRMVDESDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADE 422
Query: 414 YVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
YVQKMTFDSYLYK+VVPGNPL+DLKLA NTIGSLVRANALR+EM+KL++
Sbjct: 423 YVQKMTFDSYLYKKVVPGNPLDDLKLAFNTIGSLVRANALRKEMNKLSV 471
>gi|2828267|emb|CAA74372.1| geranylgeranyl reductase [Arabidopsis thaliana]
Length = 472
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/467 (83%), Positives = 430/467 (92%), Gaps = 8/467 (1%)
Query: 2 ASMALKSFTGLRQSPQEQQHPHFIAQ-----ALP-RQQKFRVSAAKTSPKLTNRNLRVAV 55
++ LKSFTGLRQS EQ + F++ +LP R+ RV+AA+ +PKL+NR LRVAV
Sbjct: 8 TTVTLKSFTGLRQSSTEQTN--FVSHVPSSLSLPQRRTSLRVTAARATPKLSNRKLRVAV 65
Query: 56 IGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKM 115
IGGGPAGGAAAETLA+ G+ET LIERK+DNCKPCGGAIPLCMVGEF+LPLDIIDR+VTKM
Sbjct: 66 IGGGPAGGAAAETLAQGGIETILIERKMDNCKPCGGAIPLCMVGEFNLPLDIIDRRVTKM 125
Query: 116 KMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFE 175
KMISPSN+AVDIG+TLK HEYIGMVRREVLDAYLRERAEK+GA+VINGLF+KMD P N++
Sbjct: 126 KMISPSNIAVDIGRTLKEHEYIGMVRREVLDAYLRERAEKSGATVINGLFLKMDHPENWD 185
Query: 176 QPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIP 235
PY L+YTEYDG G G K+T+EVDAVIGADGANSRVAKSI+AGDYDYAIAFQER++IP
Sbjct: 186 SPYTLHYTEYDGKTGATGTKKTMEVDAVIGADGANSRVAKSIDAGDYDYAIAFQERIRIP 245
Query: 236 DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKD 295
DEKM YYE+LAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKD
Sbjct: 246 DEKMTYYEDLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKD 305
Query: 296 KILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
KILGGKIIRVEAHPIPEHPRPRRLS RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI
Sbjct: 306 KILGGKIIRVEAHPIPEHPRPRRLSKRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 365
Query: 356 IEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYV 415
+EGS+NG +MIDEGDLRKYLEKWDKTY PTY+VLDVLQKVFYRSNPAREAFVEMC DEYV
Sbjct: 366 VEGSQNGKKMIDEGDLRKYLEKWDKTYLPTYRVLDVLQKVFYRSNPAREAFVEMCNDEYV 425
Query: 416 QKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
QKMTFDSYLYKRV PG+PLED+KLAVNTIGSLVRANALRRE++KL++
Sbjct: 426 QKMTFDSYLYKRVAPGSPLEDIKLAVNTIGSLVRANALRREIEKLSV 472
>gi|15221261|ref|NP_177587.1| geranylgeranyl diphosphate reductase [Arabidopsis thaliana]
gi|75333617|sp|Q9CA67.1|CHLP_ARATH RecName: Full=Geranylgeranyl diphosphate reductase, chloroplastic;
AltName: Full=Geranylgeranyl reductase; Flags: Precursor
gi|12324810|gb|AAG52372.1|AC011765_24 geranylgeranyl reductase; 47568-49165 [Arabidopsis thaliana]
gi|15292919|gb|AAK92830.1| putative geranylgeranyl reductase [Arabidopsis thaliana]
gi|15450455|gb|AAK96521.1| At1g74470/F1M20_15 [Arabidopsis thaliana]
gi|16648981|gb|AAL24342.1| geranylgeranyl reductase [Arabidopsis thaliana]
gi|18700167|gb|AAL77695.1| At1g74470/F1M20_15 [Arabidopsis thaliana]
gi|20259041|gb|AAM14236.1| putative geranylgeranyl reductase [Arabidopsis thaliana]
gi|20857316|gb|AAM26711.1| At1g74470/F1M20_15 [Arabidopsis thaliana]
gi|23397186|gb|AAN31876.1| putative geranylgeranyl reductase [Arabidopsis thaliana]
gi|27311931|gb|AAO00931.1| geranylgeranyl reductase [Arabidopsis thaliana]
gi|332197476|gb|AEE35597.1| geranylgeranyl diphosphate reductase [Arabidopsis thaliana]
Length = 467
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/467 (83%), Positives = 430/467 (92%), Gaps = 8/467 (1%)
Query: 2 ASMALKSFTGLRQSPQEQQHPHFIAQ-----ALP-RQQKFRVSAAKTSPKLTNRNLRVAV 55
++ LKSFTGLRQS EQ + F++ +LP R+ RV+AA+ +PKL+NR LRVAV
Sbjct: 3 TTVTLKSFTGLRQSSTEQTN--FVSHVPSSLSLPQRRTSLRVTAARATPKLSNRKLRVAV 60
Query: 56 IGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKM 115
IGGGPAGGAAAETLA+ G+ET LIERK+DNCKPCGGAIPLCMVGEF+LPLDIIDR+VTKM
Sbjct: 61 IGGGPAGGAAAETLAQGGIETILIERKMDNCKPCGGAIPLCMVGEFNLPLDIIDRRVTKM 120
Query: 116 KMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFE 175
KMISPSN+AVDIG+TLK HEYIGMVRREVLDAYLRERAEK+GA+VINGLF+KMD P N++
Sbjct: 121 KMISPSNIAVDIGRTLKEHEYIGMVRREVLDAYLRERAEKSGATVINGLFLKMDHPENWD 180
Query: 176 QPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIP 235
PY L+YTEYDG G G K+T+EVDAVIGADGANSRVAKSI+AGDYDYAIAFQER++IP
Sbjct: 181 SPYTLHYTEYDGKTGATGTKKTMEVDAVIGADGANSRVAKSIDAGDYDYAIAFQERIRIP 240
Query: 236 DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKD 295
DEKM YYE+LAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKD
Sbjct: 241 DEKMTYYEDLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKD 300
Query: 296 KILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
KILGGKIIRVEAHPIPEHPRPRRLS RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI
Sbjct: 301 KILGGKIIRVEAHPIPEHPRPRRLSKRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 360
Query: 356 IEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYV 415
+EGS+NG +MIDEGDLRKYLEKWDKTY PTY+VLDVLQKVFYRSNPAREAFVEMC DEYV
Sbjct: 361 VEGSQNGKKMIDEGDLRKYLEKWDKTYLPTYRVLDVLQKVFYRSNPAREAFVEMCNDEYV 420
Query: 416 QKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
QKMTFDSYLYKRV PG+PLED+KLAVNTIGSLVRANALRRE++KL++
Sbjct: 421 QKMTFDSYLYKRVAPGSPLEDIKLAVNTIGSLVRANALRREIEKLSV 467
>gi|66732625|gb|AAY52460.1| geranylgeranyl hydrogenase [Lotus japonicus]
Length = 462
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/464 (84%), Positives = 428/464 (92%), Gaps = 4/464 (0%)
Query: 1 MASMALKSFTGLRQSPQEQQHPHFIAQALPR--QQKFRVSAAKTSPKLTNRNLRVAVIGG 58
M S+ALKSF GLRQS E PHF Q P ++ F+V A K SPKL RNLRVAV+GG
Sbjct: 1 MNSIALKSFVGLRQSSPEA--PHFSVQLKPNAPRRNFKVLAGKFSPKLQGRNLRVAVVGG 58
Query: 59 GPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMI 118
GPAGGAAAETL+K G+ETFLIERK+DNCKPCGGAIPLCMVGEFDLPLDIIDR+VTKMKMI
Sbjct: 59 GPAGGAAAETLSKAGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKMI 118
Query: 119 SPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPY 178
SPSNVAVDIG+TLKPHEYIGMVRREVLDAYLR+RA++NGA +INGLF+KMD+P + PY
Sbjct: 119 SPSNVAVDIGRTLKPHEYIGMVRREVLDAYLRDRAKQNGAEIINGLFLKMDVPVDKVTPY 178
Query: 179 VLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEK 238
VL+YT YDG GG+GEKRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQER+KIPD+K
Sbjct: 179 VLHYTAYDGKTGGLGEKRTLEVDAVIGADGANSRVAKSIDAGDYEYAIAFQERIKIPDDK 238
Query: 239 MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKIL 298
M YYE+LAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATR RA+DKIL
Sbjct: 239 MAYYEDLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRKRAEDKIL 298
Query: 299 GGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEG 358
GGKIIRVEAHPIPEHPRPRRL GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+EG
Sbjct: 299 GGKIIRVEAHPIPEHPRPRRLKGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEG 358
Query: 359 SENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKM 418
SENG R+++EGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRS+PAREAFVEMCADEYVQKM
Sbjct: 359 SENGKRLVEEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSDPAREAFVEMCADEYVQKM 418
Query: 419 TFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
TFDSYLYK V PGNPL+D+KLA+NTIGSLVRANAL+REM+KL +
Sbjct: 419 TFDSYLYKTVAPGNPLQDIKLAINTIGSLVRANALKREMEKLNV 462
>gi|23397035|gb|AAN31803.1| putative geranylgeranyl reductase [Arabidopsis thaliana]
Length = 467
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/467 (83%), Positives = 430/467 (92%), Gaps = 8/467 (1%)
Query: 2 ASMALKSFTGLRQSPQEQQHPHFIAQ-----ALP-RQQKFRVSAAKTSPKLTNRNLRVAV 55
++ LKSFTGLRQS EQ + F++ +LP R+ RV+AA+ +PKL+NR LRVAV
Sbjct: 3 TTVTLKSFTGLRQSSTEQTN--FVSHVPSSLSLPQRRTSLRVTAARATPKLSNRKLRVAV 60
Query: 56 IGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKM 115
IGGGPAGGAAAETLA+ G+ET LIERK+DNCKPCGGAIPLCMVGEF+LPLDIIDR+VTKM
Sbjct: 61 IGGGPAGGAAAETLAQGGIETILIERKMDNCKPCGGAIPLCMVGEFNLPLDIIDRRVTKM 120
Query: 116 KMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFE 175
KMISPSN+AVDIG+TLK HEYIGMVRREVLDAYLRERAEK+GA+VINGLF+KMD P N++
Sbjct: 121 KMISPSNIAVDIGRTLKEHEYIGMVRREVLDAYLRERAEKSGATVINGLFLKMDHPENWD 180
Query: 176 QPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIP 235
PY L+YTEYDG G G K+T+EVDAVIGADGANSRVAKSI+AGDYDYAIAFQER++IP
Sbjct: 181 SPYTLHYTEYDGKAGATGTKKTMEVDAVIGADGANSRVAKSIDAGDYDYAIAFQERIRIP 240
Query: 236 DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKD 295
DEKM YYE+LAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKD
Sbjct: 241 DEKMTYYEDLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKD 300
Query: 296 KILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
KILGGKIIRVEAHPIPEHPRPRRLS RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI
Sbjct: 301 KILGGKIIRVEAHPIPEHPRPRRLSKRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 360
Query: 356 IEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYV 415
+EGS+NG +MIDEGDLRKYLEKWDKTY PTY+VLDVLQKVFYRSNPAREAFVEMC DEYV
Sbjct: 361 VEGSQNGKKMIDEGDLRKYLEKWDKTYLPTYRVLDVLQKVFYRSNPAREAFVEMCNDEYV 420
Query: 416 QKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
QKMTFDSYLYKRV PG+PLED+KLAVNTIGSLVRANALRRE++KL++
Sbjct: 421 QKMTFDSYLYKRVAPGSPLEDIKLAVNTIGSLVRANALRREIEKLSV 467
>gi|114324489|gb|ABI63587.1| geranylgeranyl reductase [Brassica rapa subsp. pekinensis]
Length = 466
Score = 787 bits (2033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/466 (83%), Positives = 427/466 (91%), Gaps = 4/466 (0%)
Query: 1 MASMALKSFTGLRQSPQEQ-QHPHFIAQALPRQQK---FRVSAAKTSPKLTNRNLRVAVI 56
MA+ ALKSFTGLRQSP +Q + +L R Q+ +V+A++ SPKL NR+LRVAVI
Sbjct: 1 MATFALKSFTGLRQSPTDQITFVSNVPSSLSRSQRRTSLKVTASRASPKLANRSLRVAVI 60
Query: 57 GGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMK 116
GGGPAGGAAAETLA+ G+ET LIERK+DNCKPCGGAIPLCMVGEF+LPLDIIDR+VTKMK
Sbjct: 61 GGGPAGGAAAETLAQGGIETILIERKMDNCKPCGGAIPLCMVGEFNLPLDIIDRRVTKMK 120
Query: 117 MISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQ 176
MISPSN+AVDIG+TLK HEYIGMVRREVLD YLRERAEK+GA+VINGLF+KMDLP ++
Sbjct: 121 MISPSNIAVDIGRTLKEHEYIGMVRREVLDQYLRERAEKSGATVINGLFLKMDLPEEWDS 180
Query: 177 PYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPD 236
PYVL+YTEYDG G G+K+T+EVDAVIGADGANSRVAKSI AGDYDYAIAFQER++IPD
Sbjct: 181 PYVLHYTEYDGKTGATGQKKTMEVDAVIGADGANSRVAKSIGAGDYDYAIAFQERIRIPD 240
Query: 237 EKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDK 296
+KM YYE+LAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDK
Sbjct: 241 DKMTYYEDLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDK 300
Query: 297 ILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAII 356
ILGGKIIRVEAHPIPEHPRPRRLS RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+
Sbjct: 301 ILGGKIIRVEAHPIPEHPRPRRLSKRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIV 360
Query: 357 EGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQ 416
EGS+NG +MIDE DLRKYLEKWDKTY PTY+VLDVLQKVFYRSNPAREAFVEMC DEYVQ
Sbjct: 361 EGSQNGKKMIDESDLRKYLEKWDKTYLPTYRVLDVLQKVFYRSNPAREAFVEMCGDEYVQ 420
Query: 417 KMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
KMTFDSYLYKRV PG+PLEDLKLAVNTIGS+ RANALRRE++KL +
Sbjct: 421 KMTFDSYLYKRVAPGSPLEDLKLAVNTIGSVFRANALRREIEKLNV 466
>gi|62126055|gb|AAX63898.1| geranylgeranyl reductase [Medicago truncatula]
Length = 462
Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/462 (83%), Positives = 424/462 (91%)
Query: 1 MASMALKSFTGLRQSPQEQQHPHFIAQALPRQQKFRVSAAKTSPKLTNRNLRVAVIGGGP 60
M+S+ALKSF GLR S E + + + ++KF V AA TSPK+ RNLRVAVIGGGP
Sbjct: 1 MSSIALKSFLGLRISSPETPQFSYRPKPITHRRKFTVVAAATSPKIDGRNLRVAVIGGGP 60
Query: 61 AGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISP 120
AGGAAAETLAK G+ETFLIERK+DNCKPCGGAIPLCMVGEFDLPLDIIDR+VTKMKMISP
Sbjct: 61 AGGAAAETLAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKMISP 120
Query: 121 SNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVL 180
SNVAVDIG+TLK HEYIGMVRREVLD YLR RA++NGA++INGLF+KMD+P+ PYVL
Sbjct: 121 SNVAVDIGRTLKSHEYIGMVRREVLDDYLRNRAKENGANIINGLFLKMDIPKEKNAPYVL 180
Query: 181 YYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMV 240
+Y+ YDG GGVGEK TLEVD VIGADGANSRVAKSI+AGDY+YAIAFQER+KIPD+KM
Sbjct: 181 HYSSYDGKTGGVGEKTTLEVDVVIGADGANSRVAKSIDAGDYEYAIAFQERIKIPDDKMA 240
Query: 241 YYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGG 300
YYE+LAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATR RA+DKILGG
Sbjct: 241 YYEDLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRKRAEDKILGG 300
Query: 301 KIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
KIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI++GS
Sbjct: 301 KIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVQGSA 360
Query: 361 NGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTF 420
NG RM++EGDLRKYLEKWDKTYWPTYKVLD+LQKVFYRSNPAREAFVEMCADEYVQKMTF
Sbjct: 361 NGKRMVEEGDLRKYLEKWDKTYWPTYKVLDILQKVFYRSNPAREAFVEMCADEYVQKMTF 420
Query: 421 DSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
DSYLYK VVPG+PLED+KLA+NTIGSLVRANALRREMDKL +
Sbjct: 421 DSYLYKTVVPGSPLEDIKLAINTIGSLVRANALRREMDKLNV 462
>gi|75216452|sp|Q9ZS34.1|CHLP_TOBAC RecName: Full=Geranylgeranyl diphosphate reductase, chloroplastic;
AltName: Full=Geranylgeranyl reductase; Flags: Precursor
gi|3821254|emb|CAA07683.1| geranylgeranyl reductase [Nicotiana tabacum]
Length = 464
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/465 (83%), Positives = 423/465 (90%), Gaps = 4/465 (0%)
Query: 1 MASMALKSFTGLRQSPQEQQHPHFIAQALPRQQ---KFRVSAAKTSPKLTNRNLRVAVIG 57
MAS+ALK+FTGLRQS E ++++LP Q + R++A+K+SP++ RNLRVAV+G
Sbjct: 1 MASIALKTFTGLRQSSPENNSIT-LSKSLPFTQTHRRLRINASKSSPRVNGRNLRVAVVG 59
Query: 58 GGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKM 117
GGPAGGAAAETLAK G+ETFLIERK+DNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKM
Sbjct: 60 GGPAGGAAAETLAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKM 119
Query: 118 ISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQP 177
ISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF+KMD+P+ P
Sbjct: 120 ISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKAPNAP 179
Query: 178 YVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
YVL+YT YD G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER+KI D+
Sbjct: 180 YVLHYTAYDSKTNGAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIKISDD 239
Query: 238 KMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKI 297
KM YYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHK DIKKFQLATR RA KI
Sbjct: 240 KMKYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKADIKKFQLATRLRADSKI 299
Query: 298 LGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIE 357
GGKIIRVEAHPIPEHPRPRRL RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+E
Sbjct: 300 TGGKIIRVEAHPIPEHPRPRRLQDRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVE 359
Query: 358 GSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQK 417
GSE G RM+DE DLRKYLEKWDKTYWPTYKVLD+LQKVFYRSNPAREAFVEMCADEYVQK
Sbjct: 360 GSEMGKRMVDESDLRKYLEKWDKTYWPTYKVLDILQKVFYRSNPAREAFVEMCADEYVQK 419
Query: 418 MTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
MTFDSYLYK+V PGNP+EDLKLAVNTIGSLVRANALRREMDKL++
Sbjct: 420 MTFDSYLYKKVAPGNPIEDLKLAVNTIGSLVRANALRREMDKLSV 464
>gi|300825706|gb|ADK35887.1| geranylgeranyl reductase [Sesamum indicum]
Length = 465
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/465 (83%), Positives = 423/465 (90%), Gaps = 3/465 (0%)
Query: 1 MASMALKSFTGLRQSPQEQQHPHF---IAQALPRQQKFRVSAAKTSPKLTNRNLRVAVIG 57
MAS+ALK+F GLRQS E IA ++ RV+A+K+SP++T RNLRVAV+G
Sbjct: 1 MASIALKTFVGLRQSTPENNAIVLSKPIATTTLPYRRLRVNASKSSPRVTGRNLRVAVVG 60
Query: 58 GGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKM 117
GGPAGGAAAETLAK G+ETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR+VTKMKM
Sbjct: 61 GGPAGGAAAETLAKGGIETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKM 120
Query: 118 ISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQP 177
ISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLR+RA GA+VINGLF+KMDLP++ P
Sbjct: 121 ISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRDRASDAGATVINGLFLKMDLPQSKNAP 180
Query: 178 YVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
YVL+YT+Y+ G GEK+T+EVDAVIGADGANSRVAK INAGDYDYAIAFQER+KI DE
Sbjct: 181 YVLHYTDYNAKTGSAGEKKTMEVDAVIGADGANSRVAKGINAGDYDYAIAFQERIKISDE 240
Query: 238 KMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKI 297
KM YYENLAEMYVG+DVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATR RA+DKI
Sbjct: 241 KMKYYENLAEMYVGEDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRLRARDKI 300
Query: 298 LGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIE 357
GG+IIRVEAHPIPEHPRP+R+ RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+E
Sbjct: 301 EGGRIIRVEAHPIPEHPRPKRVLDRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVE 360
Query: 358 GSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQK 417
GSENG RM++E DLR YLEKWDKTYWPTYKVLD+LQKVFYRSNPA+EAFVEMCADEYVQK
Sbjct: 361 GSENGKRMVEESDLRVYLEKWDKTYWPTYKVLDILQKVFYRSNPAKEAFVEMCADEYVQK 420
Query: 418 MTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
MTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALR+EM+KL++
Sbjct: 421 MTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRKEMEKLSV 465
>gi|37921345|gb|AAP55675.1| geranylgeranyl reductase [Prunus persica]
Length = 466
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/468 (82%), Positives = 422/468 (90%), Gaps = 8/468 (1%)
Query: 1 MASMALKSFTGLRQSPQEQQHPHFIAQALPR------QQKFRVSAAKTSPKLTNRNLRVA 54
MAS+A KSF GLRQ+ E+ PHF QA P ++ +V+AAKTSPK+T RNLRVA
Sbjct: 1 MASIAPKSFIGLRQASAEK--PHFTIQAKPISLNPSIHRRLQVNAAKTSPKVTGRNLRVA 58
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTK 114
V+GGGPAGG+AAETLAK G+ETFLIERK+DNCKPCGGAIPLCMVGEFDLPLDIIDR+VTK
Sbjct: 59 VVGGGPAGGSAAETLAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTK 118
Query: 115 MKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNF 174
MKMISPSNVAVDIGQTLKPHEYIGM RREVLD YLR RA +NGA+VINGLF+KM+ P +
Sbjct: 119 MKMISPSNVAVDIGQTLKPHEYIGMARREVLDQYLRNRASENGATVINGLFLKMEKPGDG 178
Query: 175 EQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKI 234
E PYVL+YTEYDG GG G K+ LEVDAVIGADGANSRVAKSI+AGDY+YAIAFQER+KI
Sbjct: 179 EAPYVLHYTEYDGKVGGAGVKKNLEVDAVIGADGANSRVAKSIDAGDYEYAIAFQERIKI 238
Query: 235 PDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAK 294
PD+KMVYYENLAEMYVGDDVSPDFYGWVFP+CDHV VGTGTVT +G+ KKFQLATRNR+K
Sbjct: 239 PDDKMVYYENLAEMYVGDDVSPDFYGWVFPQCDHVPVGTGTVTPQGNFKKFQLATRNRSK 298
Query: 295 DKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEA 354
DKILGGK +RVEAHPIPEHPRPRRL+GRVALVGDAAGYVTKCSGEG YFA K RMCAE
Sbjct: 299 DKILGGKFLRVEAHPIPEHPRPRRLAGRVALVGDAAGYVTKCSGEGFYFAPKIIRMCAEP 358
Query: 355 IIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEY 414
I+EGSENG RM++E DLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEY
Sbjct: 359 IVEGSENGKRMVNEADLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEY 418
Query: 415 VQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
VQKMTFDSYLYKRVVPGNP EDLKLAVNTIGSLVRANALRREM+KL +
Sbjct: 419 VQKMTFDSYLYKRVVPGNPWEDLKLAVNTIGSLVRANALRREMEKLNV 466
>gi|3202030|gb|AAC19396.1| geranylgeranyl hydrogenase [Mesembryanthemum crystallinum]
Length = 466
Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/463 (81%), Positives = 403/463 (87%), Gaps = 5/463 (1%)
Query: 2 ASMALKSFTGLRQSPQEQQHPHFIAQA----LPRQQKFRVSAAKTSPKLTNRNLRVAVIG 57
+SMA K FTGLRQS LP K + AA TSPKLT RNLRVAVIG
Sbjct: 3 SSMAFKPFTGLRQSTLTTPETTTTTPITFTKLP-SSKTAIRAAITSPKLTGRNLRVAVIG 61
Query: 58 GGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKM 117
GGPAGG+AAETLAKNG+ETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR+VTKMKM
Sbjct: 62 GGPAGGSAAETLAKNGIETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKM 121
Query: 118 ISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQP 177
ISPSNVAVDIG+TLKPHEYIGMVRREVLD YLRERA GA+VINGLF+KMDLP +
Sbjct: 122 ISPSNVAVDIGRTLKPHEYIGMVRREVLDEYLRERAAGFGATVINGLFLKMDLPEGKDGS 181
Query: 178 YVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
Y L+YT YD GG GE+R LEVDAVIGADGANSRVAK+I AGDY+YAIAFQER+KIPD
Sbjct: 182 YKLHYTGYDAKSGGAGERRMLEVDAVIGADGANSRVAKAIGAGDYEYAIAFQERIKIPDA 241
Query: 238 KMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKI 297
KM YYE+LAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHK DIKKFQLATR RA DKI
Sbjct: 242 KMQYYEDLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKSDIKKFQLATRTRAMDKI 301
Query: 298 LGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIE 357
GGKIIRVEAHPIPEHPRP+R+ RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+E
Sbjct: 302 QGGKIIRVEAHPIPEHPRPKRVLDRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVE 361
Query: 358 GSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQK 417
GS NG RM+DE DLRKYLEKWDK YWPTYKVLD+LQKVFYRSNPAREAFVEMCADEYVQK
Sbjct: 362 GSANGKRMVDESDLRKYLEKWDKKYWPTYKVLDILQKVFYRSNPAREAFVEMCADEYVQK 421
Query: 418 MTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKL 460
MTFDSYLYK VVPGNPL+DLKLAV T+GSLVRA LRREM+K+
Sbjct: 422 MTFDSYLYKTVVPGNPLDDLKLAVRTVGSLVRAYGLRREMEKI 464
>gi|257097946|gb|ACV41179.1| geranyl geranyl reductase [Posidonia oceanica]
Length = 464
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/463 (81%), Positives = 418/463 (90%), Gaps = 4/463 (0%)
Query: 1 MASMALKSFTGLRQSPQEQQH--PHFIAQALP-RQQKFRVSAAKTSPKLTNRNLRVAVIG 57
MAS+ALK+FTGLRQS EQ + H + +LP R+ RV+AA+ SPKL+NR LRVAVIG
Sbjct: 1 MASIALKTFTGLRQSSTEQTNFVSHSSSLSLPQRRTSLRVTAARASPKLSNRKLRVAVIG 60
Query: 58 GGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKM 117
GGPAGGAAAETLA+ G+ET LIERK+DNCKPCGGAIPLCMVGEFDLPLDIIDR+VTKMKM
Sbjct: 61 GGPAGGAAAETLAQGGIETILIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKM 120
Query: 118 ISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQP 177
ISPSNVAVDIG+TLKPHEYIGM+RREVLDAYLR+RA G +VINGLF+KMD P++ P
Sbjct: 121 ISPSNVAVDIGRTLKPHEYIGMLRREVLDAYLRDRASSLGTTVINGLFLKMDSPKDDVSP 180
Query: 178 YVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
YVL+YT YD + G G+ TLEVDAVIGADGANSRVAK+I+AGDYDYAIAFQERVKIPD+
Sbjct: 181 YVLHYTHYDRS-GPSGKPSTLEVDAVIGADGANSRVAKAISAGDYDYAIAFQERVKIPDD 239
Query: 238 KMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKI 297
KM YY++LAEMYVG DVSPDFYGWVFPKCDHVAVGTGTVTHK DIKKFQ ATR RAKDKI
Sbjct: 240 KMEYYKDLAEMYVGQDVSPDFYGWVFPKCDHVAVGTGTVTHKSDIKKFQTATRLRAKDKI 299
Query: 298 LGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIE 357
GGKIIRVEAHPIPEHPRPRRL GRVAL+GDAAGYVTKCSGEGIYFAAKSGRMCAEAI+E
Sbjct: 300 EGGKIIRVEAHPIPEHPRPRRLLGRVALIGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVE 359
Query: 358 GSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQK 417
GSEN +++DE DLRKYL+K+DK YWPTYKVLDVLQKVFYRS+PAREAFVEMCADEYVQK
Sbjct: 360 GSENEKKLVDESDLRKYLKKFDKAYWPTYKVLDVLQKVFYRSDPAREAFVEMCADEYVQK 419
Query: 418 MTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKL 460
MTF+SYLYK+VVPGNP++D+KLA NTIGSLVRANA+RREM KL
Sbjct: 420 MTFNSYLYKKVVPGNPVDDIKLAFNTIGSLVRANAMRREMTKL 462
>gi|89474863|gb|ABD73016.1| geranylgeranyl reductase [Olea europaea]
Length = 462
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/462 (80%), Positives = 409/462 (88%)
Query: 1 MASMALKSFTGLRQSPQEQQHPHFIAQALPRQQKFRVSAAKTSPKLTNRNLRVAVIGGGP 60
MAS+ALKSF GLRQ+ E + K R++A+KTSP++ RNL+VAV+GGGP
Sbjct: 1 MASIALKSFIGLRQTTSENKSIVLTKPNTQTYHKIRINASKTSPRVNGRNLKVAVVGGGP 60
Query: 61 AGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISP 120
AGGAAAETLAK G+ET L ERK+DNCKPCGGAIPLCMVGEFDLPLDIIDR+VTKMKMISP
Sbjct: 61 AGGAAAETLAKGGIETILFERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKMISP 120
Query: 121 SNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVL 180
SNVAVDIGQTLKPHEYIGMVRREVLDAYLR+RA GA+VINGL +KMDLP++ PY L
Sbjct: 121 SNVAVDIGQTLKPHEYIGMVRREVLDAYLRDRAATAGATVINGLLLKMDLPKSTGSPYKL 180
Query: 181 YYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMV 240
+YT+Y+ GG GEK+T+E DAVIGADGANSRVAK+INAG+Y+YAIAFQER+KI D+KM
Sbjct: 181 HYTDYNAKTGGAGEKKTMEADAVIGADGANSRVAKNINAGEYEYAIAFQERIKISDDKMK 240
Query: 241 YYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGG 300
YYENLAEMYVGDDVSPDFYGWVFP CDHVAVGTGTVTHKGDIKK Q+A R RA+DKI GG
Sbjct: 241 YYENLAEMYVGDDVSPDFYGWVFPTCDHVAVGTGTVTHKGDIKKLQIAPRLRARDKIEGG 300
Query: 301 KIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
KIIRVEA PIPEHPRPRR+ RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+EGSE
Sbjct: 301 KIIRVEAPPIPEHPRPRRVLDRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSE 360
Query: 361 NGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTF 420
NG RM+DE DLRKYLEKWDKTYWP YKVLDVLQKVF RSNP REAFVEMCADEYVQKMTF
Sbjct: 361 NGIRMVDESDLRKYLEKWDKTYWPPYKVLDVLQKVFSRSNPPREAFVEMCADEYVQKMTF 420
Query: 421 DSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
DSYLYK+VVPGNPL+DLKLAVN IGSLVRAN LRREM+KL++
Sbjct: 421 DSYLYKKVVPGNPLDDLKLAVNPIGSLVRANPLRREMEKLSV 462
>gi|147781719|emb|CAN61003.1| hypothetical protein VITISV_009187 [Vitis vinifera]
Length = 447
Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/469 (80%), Positives = 408/469 (86%), Gaps = 29/469 (6%)
Query: 1 MASMALKSFTGLRQSPQEQQHP-------HFIAQALPRQQKFRVSAAKTSPKLTNRNLRV 53
MAS++LK+F GLRQS + + H AQ P + R+ A K SPK+T RNLRV
Sbjct: 1 MASISLKTFVGLRQSSSDTYNSGHVFPVKHLPAQ--PASRGLRIVAGKFSPKVTGRNLRV 58
Query: 54 AVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVT 113
AV+GGGPAGG+AAETLAK G+ETFLIERKL NCKPCGGAIPLCMVGEFDLPLDIIDR+VT
Sbjct: 59 AVVGGGPAGGSAAETLAKGGIETFLIERKLXNCKPCGGAIPLCMVGEFDLPLDIIDRRVT 118
Query: 114 KMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRN 173
KMKMISPSNVAVDIGQTLKPHEYIGMVRREVLD+YLRERA +GA+VINGLF+KMD P+
Sbjct: 119 KMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDSYLRERASASGATVINGLFLKMDAPKG 178
Query: 174 FEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVK 233
PYVL+YT YD GGVGE+RTLEVDA DYAIAFQER+K
Sbjct: 179 ATAPYVLHYTGYDSKTGGVGERRTLEVDA--------------------DYAIAFQERIK 218
Query: 234 IPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRA 293
IPD+KMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHK DIKKFQLATR RA
Sbjct: 219 IPDDKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKSDIKKFQLATRLRA 278
Query: 294 KDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAE 353
K+KILGGKIIRVEAHPIPEHPRPRRL+GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAE
Sbjct: 279 KEKILGGKIIRVEAHPIPEHPRPRRLAGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAE 338
Query: 354 AIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADE 413
AI+EGSENG RM+DEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADE
Sbjct: 339 AIVEGSENGKRMVDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADE 398
Query: 414 YVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
YVQKMTFDSYLYK+VVPGNPLEDLKLAVNTIGSLVRANALRREMDK+++
Sbjct: 399 YVQKMTFDSYLYKKVVPGNPLEDLKLAVNTIGSLVRANALRREMDKMSV 447
>gi|148909299|gb|ABR17749.1| unknown [Picea sitchensis]
Length = 514
Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/426 (82%), Positives = 384/426 (90%), Gaps = 1/426 (0%)
Query: 37 VSAAKTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLC 96
V A + KL R LRVAVIGGGPAGG AETLAK G+ETFLIERKLDN KPCGGAIPLC
Sbjct: 90 VYAGINNRKLEGRKLRVAVIGGGPAGGCTAETLAKGGIETFLIERKLDNAKPCGGAIPLC 149
Query: 97 MVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKN 156
MVGEF+LPLDIIDRKVTKMKMISPSNVAVD+G+TLK +EYIGMVRREVLD+YLRERA K
Sbjct: 150 MVGEFELPLDIIDRKVTKMKMISPSNVAVDVGRTLKENEYIGMVRREVLDSYLRERAAKF 209
Query: 157 GASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS 216
GA+VINGLFMKMDLP++ + PYVL+Y YDG G + TLEVDAV+GADGANSRVAK
Sbjct: 210 GANVINGLFMKMDLPKDSDSPYVLHYNLYDGASSQ-GTRCTLEVDAVVGADGANSRVAKG 268
Query: 217 INAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV 276
I+AGDYDYAIAFQER+ +P EKM YYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV
Sbjct: 269 IDAGDYDYAIAFQERIMLPVEKMGYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV 328
Query: 277 THKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKC 336
+K IK++QLATRNRAK+KI GGKIIRVEAHPIPEHPRPRR+ RVALVGDAAGYVTKC
Sbjct: 329 INKPGIKQYQLATRNRAKEKIEGGKIIRVEAHPIPEHPRPRRVKDRVALVGDAAGYVTKC 388
Query: 337 SGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVF 396
SGEGIYFAAKSGRMCAEAI+EGS NGTRMI+E DLR+YLEKWDK YWPTYKVLD+LQKVF
Sbjct: 389 SGEGIYFAAKSGRMCAEAIVEGSANGTRMINEADLRRYLEKWDKQYWPTYKVLDILQKVF 448
Query: 397 YRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRRE 456
YRSNPAREAFVEMCAD+YVQKMTFDSYLYK VVPGNPL+DLKLA+ TIGSLVRA+ALR+E
Sbjct: 449 YRSNPAREAFVEMCADDYVQKMTFDSYLYKTVVPGNPLDDLKLAIKTIGSLVRASALRKE 508
Query: 457 MDKLTI 462
M KL++
Sbjct: 509 MKKLSV 514
>gi|168065762|ref|XP_001784816.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663613|gb|EDQ50368.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 524
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/469 (76%), Positives = 405/469 (86%), Gaps = 14/469 (2%)
Query: 5 ALKSFTGLR-----------QSPQEQQHPHFIAQALPRQQKFRVSAAKTSPKLTNRNLRV 53
+LKSF GLR +S + ++ + + +A Q RV AA+ S K+ R LRV
Sbjct: 59 SLKSFEGLRGLNASGPTSAVESLKAERRSNVVEEA--GYQPLRVYAARGSKKIEGRKLRV 116
Query: 54 AVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVT 113
AV+GGGPAGG AAETLAK G+ETFLIERKLDN KPCGGAIPLCMVGEFDLP +IIDRKVT
Sbjct: 117 AVVGGGPAGGCAAETLAKGGIETFLIERKLDNAKPCGGAIPLCMVGEFDLPPEIIDRKVT 176
Query: 114 KMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRN 173
KMKMISPSNVAVD+G+TL EYIGMVRREVLD++LRERA+KNGAS+INGLF++M++P++
Sbjct: 177 KMKMISPSNVAVDVGKTLNDDEYIGMVRREVLDSFLRERAQKNGASIINGLFLRMEVPKD 236
Query: 174 FEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVK 233
+ PY L+YT +DG+ +G LEVDAVIGADGANSRVAK I+AG+YDYAIAFQER+K
Sbjct: 237 NDSPYRLHYTNFDGS-SKIGTPAVLEVDAVIGADGANSRVAKDIDAGEYDYAIAFQERIK 295
Query: 234 IPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRA 293
IP++KM YYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV +K IKK+Q ATRNRA
Sbjct: 296 IPEDKMEYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVINKPAIKKYQTATRNRA 355
Query: 294 KDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAE 353
KDKI GGKIIRVEAHPIPEHPRPRR S RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAE
Sbjct: 356 KDKIAGGKIIRVEAHPIPEHPRPRRASDRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAE 415
Query: 354 AIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADE 413
AI+EGS NGTRMIDE DLR YL+KWDK YW TYKVLD+LQKVFYRSNPAREAFVEMCAD+
Sbjct: 416 AIVEGSANGTRMIDESDLRTYLDKWDKKYWATYKVLDILQKVFYRSNPAREAFVEMCADD 475
Query: 414 YVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
YVQKMTFDSYLYK VVPGNPL+DLKLAVNTIGSL+RANALR+E +K+T+
Sbjct: 476 YVQKMTFDSYLYKVVVPGNPLDDLKLAVNTIGSLIRANALRKESEKMTV 524
>gi|168006450|ref|XP_001755922.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692852|gb|EDQ79207.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 522
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/430 (80%), Positives = 385/430 (89%), Gaps = 1/430 (0%)
Query: 33 QKFRVSAAKTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGA 92
Q RV AA+ S K+ R LRVAV+GGGPAGG AAETLAK G+ETFLIERKLDN KPCGGA
Sbjct: 94 QPLRVYAARGSKKIEGRKLRVAVVGGGPAGGCAAETLAKGGIETFLIERKLDNAKPCGGA 153
Query: 93 IPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRER 152
IPLCMVGEFDLP +IIDRKVTKMKMISPSNVAVD+G+TL EYIGMVRREVLD++LRER
Sbjct: 154 IPLCMVGEFDLPPEIIDRKVTKMKMISPSNVAVDVGKTLNDDEYIGMVRREVLDSFLRER 213
Query: 153 AEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSR 212
A KNGA++INGLF++MD+P++ PY L+YT +DG VG LEVDAVIGADGANSR
Sbjct: 214 AVKNGATIINGLFLRMDVPKDENTPYKLHYTNFDGASK-VGTPGVLEVDAVIGADGANSR 272
Query: 213 VAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVG 272
VAK I+AG+YDYAIAFQER+KIPD+KM YYENLAEMYVGDDVSPDFYGWVFPKCDHVAVG
Sbjct: 273 VAKDIDAGEYDYAIAFQERIKIPDDKMEYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVG 332
Query: 273 TGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGY 332
TGTV +K IKK+Q ATRNRAKDKI GGKIIRVEAHPIPEHPRPRR S RVAL+GDAAGY
Sbjct: 333 TGTVINKPAIKKYQTATRNRAKDKIAGGKIIRVEAHPIPEHPRPRRASNRVALIGDAAGY 392
Query: 333 VTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVL 392
VTKCSGEGIYFAAKSGRMCAEAI+EGS NGTRM+DE DLR YLEKWDK YW TYKVLD+L
Sbjct: 393 VTKCSGEGIYFAAKSGRMCAEAIVEGSANGTRMVDESDLRTYLEKWDKKYWATYKVLDIL 452
Query: 393 QKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANA 452
QKVFYRSNPAREAFVEMCAD+YVQKMTFDSYLYK VVPGNPL+D+KLA+NTIGSL+RANA
Sbjct: 453 QKVFYRSNPAREAFVEMCADDYVQKMTFDSYLYKVVVPGNPLDDIKLAINTIGSLIRANA 512
Query: 453 LRREMDKLTI 462
LR+E +K+T+
Sbjct: 513 LRKESEKMTV 522
>gi|168031332|ref|XP_001768175.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680613|gb|EDQ67048.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 518
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/430 (80%), Positives = 387/430 (90%), Gaps = 1/430 (0%)
Query: 33 QKFRVSAAKTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGA 92
Q RV AA+ S K+ R LRVAV+GGGPAGG AAETLA G+ETFLIERKLDN KPCGGA
Sbjct: 90 QPLRVYAARGSKKIEGRKLRVAVVGGGPAGGCAAETLAMGGIETFLIERKLDNAKPCGGA 149
Query: 93 IPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRER 152
IPLCMVGEFDLP +IIDRKVTKMKMISPSNVAVD+G+TL EYIGMVRREVLD++LRER
Sbjct: 150 IPLCMVGEFDLPPEIIDRKVTKMKMISPSNVAVDVGKTLNDDEYIGMVRREVLDSFLRER 209
Query: 153 AEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSR 212
A+KNGA++INGLF++M++P++ + PY L+YT +DG+ VG LEVDAVIGADGANSR
Sbjct: 210 AQKNGATIINGLFLRMEVPKDNDSPYKLHYTNFDGS-SKVGTPAVLEVDAVIGADGANSR 268
Query: 213 VAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVG 272
VAK I+AG+YDYAIAFQER+KIP +KM YYENLAEMYVGDDVSPDFYGWVFPKCDHVAVG
Sbjct: 269 VAKDIDAGEYDYAIAFQERIKIPADKMEYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVG 328
Query: 273 TGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGY 332
TGTV +K IKK+Q ATRNRAKDKI GGKIIRVEAHPIPEHPRPRR+S RVALVGDAAGY
Sbjct: 329 TGTVINKPSIKKYQTATRNRAKDKIAGGKIIRVEAHPIPEHPRPRRVSSRVALVGDAAGY 388
Query: 333 VTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVL 392
VTKCSGEGIYFAAKSGRMCAEAI+EGS NGTRM+DE DLR YL+KWDK YW TYKVLD+L
Sbjct: 389 VTKCSGEGIYFAAKSGRMCAEAIVEGSANGTRMVDESDLRVYLDKWDKKYWATYKVLDIL 448
Query: 393 QKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANA 452
QKVFYRSNPAREAFVEMCAD+YVQKMTFDSYLYK VVPGNPL+D+KLAVNTIGSL+RANA
Sbjct: 449 QKVFYRSNPAREAFVEMCADDYVQKMTFDSYLYKVVVPGNPLDDIKLAVNTIGSLIRANA 508
Query: 453 LRREMDKLTI 462
LR+E +K+T+
Sbjct: 509 LRKESEKMTV 518
>gi|302787985|ref|XP_002975762.1| hypothetical protein SELMODRAFT_150713 [Selaginella moellendorffii]
gi|300156763|gb|EFJ23391.1| hypothetical protein SELMODRAFT_150713 [Selaginella moellendorffii]
Length = 501
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/444 (78%), Positives = 387/444 (87%), Gaps = 6/444 (1%)
Query: 24 FIAQALPRQQK-----FRVSAAKTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFL 78
F+A + P + R+ AA S KL NR LRVAVIGGGPAGG AAETLAKNG+ETFL
Sbjct: 58 FLAASTPSLTRNSRPGLRILAAAGSKKLGNRKLRVAVIGGGPAGGCAAETLAKNGIETFL 117
Query: 79 IERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIG 138
IERK+DN KPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVD+G+TL +EYIG
Sbjct: 118 IERKMDNAKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDVGKTLNENEYIG 177
Query: 139 MVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTL 198
MVRREVLD+YLRERA GA+++NGLF++M++P + PYVL+Y Y VG TL
Sbjct: 178 MVRREVLDSYLRERAASFGANLVNGLFLRMEMPSDANAPYVLHYNLYK-PGSSVGVPATL 236
Query: 199 EVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDF 258
EVDAVIGADGANSRVAK I+AGDYDYAIAFQER+KIPD+KMVYYENLAEMYVGDDVSPDF
Sbjct: 237 EVDAVIGADGANSRVAKDIDAGDYDYAIAFQERIKIPDDKMVYYENLAEMYVGDDVSPDF 296
Query: 259 YGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRR 318
YGWVFPKCDHVAVGTGTV +K IKK+Q+ATR+RA+DKI GGKIIRVEAHPIPEHPRPRR
Sbjct: 297 YGWVFPKCDHVAVGTGTVINKPAIKKYQVATRHRARDKIAGGKIIRVEAHPIPEHPRPRR 356
Query: 319 LSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKW 378
+ RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+EGSE G RMI+E DLR YL+KW
Sbjct: 357 VRDRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSEKGVRMINEADLRSYLQKW 416
Query: 379 DKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLK 438
D YWPTYKVLD+LQKVFYRSNPAREAFVE+CADEYVQKMTFDSYLYK VVPGNPL+D+K
Sbjct: 417 DTKYWPTYKVLDILQKVFYRSNPAREAFVELCADEYVQKMTFDSYLYKTVVPGNPLDDIK 476
Query: 439 LAVNTIGSLVRANALRREMDKLTI 462
LAVNTIGSL+RANALR+E K +
Sbjct: 477 LAVNTIGSLIRANALRKEARKAVL 500
>gi|226528956|ref|NP_001149382.1| LOC100283007 [Zea mays]
gi|195626836|gb|ACG35248.1| geranylgeranyl hydrogenase [Zea mays]
gi|223975327|gb|ACN31851.1| unknown [Zea mays]
gi|413938849|gb|AFW73400.1| geranylgeranyl hydrogenase [Zea mays]
Length = 457
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/426 (81%), Positives = 383/426 (89%), Gaps = 2/426 (0%)
Query: 39 AAKTSPKLTN-RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCM 97
AA +SPKL N R LRVAV+GGGPAGGAAAE LAK GVET LIERK+DNCKPCGGAIPLCM
Sbjct: 32 AAASSPKLPNGRRLRVAVVGGGPAGGAAAEALAKGGVETVLIERKMDNCKPCGGAIPLCM 91
Query: 98 VGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNG 157
V EFDLPLD++DRKV KMKMISPSNVAVDIG+TL PHEYIGMVRREVLDAYLR RA+ G
Sbjct: 92 VSEFDLPLDLVDRKVRKMKMISPSNVAVDIGRTLAPHEYIGMVRREVLDAYLRSRAQSVG 151
Query: 158 ASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVG-EKRTLEVDAVIGADGANSRVAKS 216
A V+NGLF++ + P+ YV++Y YDG+ G VG EKR+ EVDA++GADGANSRVAK
Sbjct: 152 AEVVNGLFLRYEAPKEPNGSYVVHYNHYDGSNGKVGGEKRSFEVDAIVGADGANSRVAKD 211
Query: 217 INAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV 276
+ AGDY+YAIAFQERVKIPD+KMVYYE AEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV
Sbjct: 212 MGAGDYEYAIAFQERVKIPDDKMVYYEERAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV 271
Query: 277 THKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKC 336
THK DIKKFQ ATR RAKDKI GGKIIRVEAHPIPEHPRP+R+SGRV LVGDAAGYVTKC
Sbjct: 272 THKADIKKFQAATRLRAKDKIEGGKIIRVEAHPIPEHPRPKRVSGRVTLVGDAAGYVTKC 331
Query: 337 SGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVF 396
SGEGIYFAAKSGRMCAEAI+ GS NGTRM++E DLRKYL ++D+ YWPTYKVLD+LQKVF
Sbjct: 332 SGEGIYFAAKSGRMCAEAIVAGSANGTRMVEESDLRKYLAEFDRLYWPTYKVLDILQKVF 391
Query: 397 YRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRRE 456
YRSN AREAFVEMCAD+YVQKMTFDSYLYKRVVPGNPL+D+KLAVNTIGSLVRA ALRRE
Sbjct: 392 YRSNAAREAFVEMCADDYVQKMTFDSYLYKRVVPGNPLDDIKLAVNTIGSLVRATALRRE 451
Query: 457 MDKLTI 462
M+K+T+
Sbjct: 452 MEKVTL 457
>gi|302783877|ref|XP_002973711.1| hypothetical protein SELMODRAFT_271030 [Selaginella moellendorffii]
gi|300158749|gb|EFJ25371.1| hypothetical protein SELMODRAFT_271030 [Selaginella moellendorffii]
Length = 500
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/444 (78%), Positives = 387/444 (87%), Gaps = 6/444 (1%)
Query: 24 FIAQALPRQQK-----FRVSAAKTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFL 78
F+A + P + R+ AA S KL NR LRVAVIGGGPAGG AAETLAKNG+ETFL
Sbjct: 57 FLAASTPSLTRNSRPGLRILAAAGSKKLGNRKLRVAVIGGGPAGGCAAETLAKNGIETFL 116
Query: 79 IERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIG 138
IERK+DN KPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVD+G+TL +EYIG
Sbjct: 117 IERKMDNAKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDVGKTLNENEYIG 176
Query: 139 MVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTL 198
MVRREVLD+YLRERA GA+++NGLF++M++P + PYVL+Y Y VG T+
Sbjct: 177 MVRREVLDSYLRERAASFGANLVNGLFLRMEMPSDANAPYVLHYNLYK-PGSSVGVPATM 235
Query: 199 EVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDF 258
EVDAVIGADGANSRVAK I+AGDYDYAIAFQER+KIPD+KMVYYENLAEMYVGDDVSPDF
Sbjct: 236 EVDAVIGADGANSRVAKDIDAGDYDYAIAFQERIKIPDDKMVYYENLAEMYVGDDVSPDF 295
Query: 259 YGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRR 318
YGWVFPKCDHVAVGTGTV +K IKK+Q+ATR+RA+DKI GGKIIRVEAHPIPEHPRPRR
Sbjct: 296 YGWVFPKCDHVAVGTGTVINKPAIKKYQVATRHRARDKIAGGKIIRVEAHPIPEHPRPRR 355
Query: 319 LSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKW 378
+ RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+EGSE G RMI+E DLR YL+KW
Sbjct: 356 VRDRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSEKGVRMINEADLRSYLKKW 415
Query: 379 DKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLK 438
D YWPTYKVLD+LQKVFYRSNPAREAFVE+CADEYVQKMTFDSYLYK VVPGNPL+D+K
Sbjct: 416 DTKYWPTYKVLDILQKVFYRSNPAREAFVELCADEYVQKMTFDSYLYKTVVPGNPLDDIK 475
Query: 439 LAVNTIGSLVRANALRREMDKLTI 462
LAVNTIGSL+RANALR+E K +
Sbjct: 476 LAVNTIGSLIRANALRKEARKAVL 499
>gi|242065996|ref|XP_002454287.1| hypothetical protein SORBIDRAFT_04g028050 [Sorghum bicolor]
gi|241934118|gb|EES07263.1| hypothetical protein SORBIDRAFT_04g028050 [Sorghum bicolor]
Length = 457
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/426 (80%), Positives = 382/426 (89%), Gaps = 2/426 (0%)
Query: 39 AAKTSPKLTN-RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCM 97
AA +SPKL N R LRVAV+GGGPAGGAAAE LAK GVET LIERK+DNCKPCGGAIPLCM
Sbjct: 32 AAASSPKLPNGRRLRVAVVGGGPAGGAAAEALAKGGVETVLIERKMDNCKPCGGAIPLCM 91
Query: 98 VGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNG 157
V EFDLPLD++DRKV KMKMISPSNVAVDIG+TL PHEYIGMVRREVLDAYLR RA+ G
Sbjct: 92 VSEFDLPLDLVDRKVRKMKMISPSNVAVDIGRTLAPHEYIGMVRREVLDAYLRSRAQSAG 151
Query: 158 ASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVG-EKRTLEVDAVIGADGANSRVAKS 216
A V+NGLF++ + P+ YV++Y YD + G +G EKR+ EVDA++GADGANSRVAK
Sbjct: 152 AEVVNGLFLRYEAPKEPNGSYVVHYNHYDSSNGKIGGEKRSFEVDAIVGADGANSRVAKD 211
Query: 217 INAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV 276
+ AGDY+YAIAFQERVKIPD+KMVYYE AEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV
Sbjct: 212 MGAGDYEYAIAFQERVKIPDDKMVYYEERAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV 271
Query: 277 THKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKC 336
THK DIKKFQ ATR RAKDKI GGKIIRVEAHPIPEHPRP+R+SGRV LVGDAAGYVTKC
Sbjct: 272 THKADIKKFQAATRLRAKDKIEGGKIIRVEAHPIPEHPRPKRVSGRVTLVGDAAGYVTKC 331
Query: 337 SGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVF 396
SGEGIYFAAKSGRMCAEAI+ GS NGTRM++E DLRKYL ++D+ YWPTYKVLD+LQKVF
Sbjct: 332 SGEGIYFAAKSGRMCAEAIVAGSANGTRMVEESDLRKYLAEFDRLYWPTYKVLDILQKVF 391
Query: 397 YRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRRE 456
YRSN AREAFVEMCAD+YVQKMTFDSYLYKRVVPGNPL+D+KLAVNTIGSLVRA ALRRE
Sbjct: 392 YRSNAAREAFVEMCADDYVQKMTFDSYLYKRVVPGNPLDDIKLAVNTIGSLVRATALRRE 451
Query: 457 MDKLTI 462
M+K+T+
Sbjct: 452 MEKVTL 457
>gi|357138149|ref|XP_003570660.1| PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic-like
[Brachypodium distachyon]
Length = 464
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/426 (80%), Positives = 380/426 (89%), Gaps = 2/426 (0%)
Query: 39 AAKTSPKL-TNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCM 97
AA TSPKL R LRVAV+GGGPAGGAAAE LAK GVET LIERK+DNCKPCGGAIPLCM
Sbjct: 39 AAATSPKLPAGRRLRVAVVGGGPAGGAAAEALAKGGVETVLIERKMDNCKPCGGAIPLCM 98
Query: 98 VGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNG 157
V EFDLPLD++DRKVTKMKMISPSNVAVDIG+TL PHEYIGMVRREVLD +LR RA+K G
Sbjct: 99 VSEFDLPLDLVDRKVTKMKMISPSNVAVDIGRTLAPHEYIGMVRREVLDDFLRTRAQKAG 158
Query: 158 ASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVG-EKRTLEVDAVIGADGANSRVAKS 216
A V+NGLF++ + P+ Y ++Y YD + G VG EKR+ EVDA++GADGANSRVAK
Sbjct: 159 AEVLNGLFLRYEAPKEANGTYTVHYNHYDSSSGKVGGEKRSFEVDAIVGADGANSRVAKD 218
Query: 217 INAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV 276
+ AGDY+YAIAFQERVKIPD+KM YYE AEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV
Sbjct: 219 MGAGDYEYAIAFQERVKIPDDKMRYYEERAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV 278
Query: 277 THKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKC 336
THK DIKKFQ ATR RAKDKI GG+IIRVEAHPIPEHPRP+R+SGRV LVGDAAGYVTKC
Sbjct: 279 THKADIKKFQAATRLRAKDKIDGGRIIRVEAHPIPEHPRPKRVSGRVTLVGDAAGYVTKC 338
Query: 337 SGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVF 396
SGEGIYFAAKSGRMCAEAI+ GS NGTR+++EGDLRKYL ++D+ YWPTYKVLD+LQKVF
Sbjct: 339 SGEGIYFAAKSGRMCAEAIVAGSANGTRLVEEGDLRKYLAEFDRLYWPTYKVLDILQKVF 398
Query: 397 YRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRRE 456
YRSN AREAFVEMCAD+YVQ+MTFDSYLYKRVVPGNPLED+KLAVNTIGSLVRA ALRRE
Sbjct: 399 YRSNAAREAFVEMCADDYVQRMTFDSYLYKRVVPGNPLEDIKLAVNTIGSLVRATALRRE 458
Query: 457 MDKLTI 462
M KLT+
Sbjct: 459 MSKLTL 464
>gi|326529517|dbj|BAK04705.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 462
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/434 (79%), Positives = 381/434 (87%), Gaps = 2/434 (0%)
Query: 31 RQQKFRVSAAKTSPKLTN-RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPC 89
R Q AA +SPKL R LRVAV+GGGPAGGAAAE LAK GVET LIERK+DNCKPC
Sbjct: 29 RSQLLVTRAATSSPKLPGGRKLRVAVVGGGPAGGAAAEALAKGGVETVLIERKMDNCKPC 88
Query: 90 GGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYL 149
GGAIPLCMV EFDLPLD++DR+VTKMKMISPSNVAVDIG+TL PHEYIGMVRREVLD +L
Sbjct: 89 GGAIPLCMVSEFDLPLDLVDRRVTKMKMISPSNVAVDIGRTLAPHEYIGMVRREVLDDFL 148
Query: 150 RERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVG-EKRTLEVDAVIGADG 208
R RA+K GA V+NGLF++ + P+ Y ++Y YD + G VG EKR+ EVDA++GADG
Sbjct: 149 RTRAQKAGAEVLNGLFLRYEEPKERNGTYTVHYNHYDSSNGKVGGEKRSFEVDAIVGADG 208
Query: 209 ANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDH 268
ANSRVAK + AGDY+YAIAFQERVKIPD+KM YYE AEMYVGDDVSPDFYGWVFPKCDH
Sbjct: 209 ANSRVAKDMGAGDYEYAIAFQERVKIPDDKMRYYEERAEMYVGDDVSPDFYGWVFPKCDH 268
Query: 269 VAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGD 328
VAVGTGTVTHK DIKKFQ ATR RAKDKI GGKIIRVEAHPIPEHPRP+R+SGRV LVGD
Sbjct: 269 VAVGTGTVTHKADIKKFQAATRLRAKDKIEGGKIIRVEAHPIPEHPRPKRVSGRVTLVGD 328
Query: 329 AAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKV 388
AAGYVTKCSGEGIYFAAKSGRMCAEAI+ GS NGTR++DE DLRKYL ++D+ YWPTYKV
Sbjct: 329 AAGYVTKCSGEGIYFAAKSGRMCAEAIVAGSANGTRLVDESDLRKYLAEFDRLYWPTYKV 388
Query: 389 LDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
LD+LQKVFYRSN AREAFVEMCAD+YVQ+MTFDSYLYKRVVPGNP+ED+KLAVNTIGSLV
Sbjct: 389 LDILQKVFYRSNAAREAFVEMCADDYVQRMTFDSYLYKRVVPGNPIEDIKLAVNTIGSLV 448
Query: 449 RANALRREMDKLTI 462
RA ALRREM KLT+
Sbjct: 449 RATALRREMGKLTL 462
>gi|288904218|gb|AAZ67145.2| geranylgeranyl hydrogenase [Triticum aestivum]
Length = 462
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/434 (79%), Positives = 381/434 (87%), Gaps = 2/434 (0%)
Query: 31 RQQKFRVSAAKTSPKLTN-RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPC 89
R Q AA +SPKL R LRVAV+GGGPAGGAAAE LAK GVET LIERK+DNCKPC
Sbjct: 29 RSQLLVTRAAASSPKLPGGRKLRVAVVGGGPAGGAAAEALAKGGVETVLIERKMDNCKPC 88
Query: 90 GGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYL 149
GGAIPLCMV EFDLPLD++DR+VTKMKMISPSNVAVDIG+TL PHEYIGMVRREVLD +L
Sbjct: 89 GGAIPLCMVSEFDLPLDLVDRRVTKMKMISPSNVAVDIGRTLAPHEYIGMVRREVLDDFL 148
Query: 150 RERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVG-EKRTLEVDAVIGADG 208
R RA+K GA V+NGLF++ + P+ Y ++Y YD + G VG EKR+ EVDA++GADG
Sbjct: 149 RNRAQKAGAEVLNGLFLRYEAPKERNGTYTVHYNHYDSSNGKVGGEKRSFEVDAIVGADG 208
Query: 209 ANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDH 268
ANSRVAK + AGDY+YAIAFQERVKIPD+KM YYE AEMYVGDDVSPDFYGWVFPKCDH
Sbjct: 209 ANSRVAKDMGAGDYEYAIAFQERVKIPDDKMRYYEERAEMYVGDDVSPDFYGWVFPKCDH 268
Query: 269 VAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGD 328
VAVGTGTVTHK DIKKFQ ATR RAKDKI GGKIIRVEAHPIPEHPRP+R+SGRV LVGD
Sbjct: 269 VAVGTGTVTHKADIKKFQAATRLRAKDKIEGGKIIRVEAHPIPEHPRPKRVSGRVTLVGD 328
Query: 329 AAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKV 388
AAGYVTKCSGEGIYFAAKSGRMCAEAI+ GS NGTR++DE DLRKYL ++D+ YWPTYKV
Sbjct: 329 AAGYVTKCSGEGIYFAAKSGRMCAEAIVAGSANGTRLVDESDLRKYLAEFDRLYWPTYKV 388
Query: 389 LDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
LD+LQKVFYRSN AREAFVEMCAD+YVQ+MTFDSYLYKRVVPGNP+ED+KLAVNTIGSLV
Sbjct: 389 LDILQKVFYRSNAAREAFVEMCADDYVQRMTFDSYLYKRVVPGNPIEDIKLAVNTIGSLV 448
Query: 449 RANALRREMDKLTI 462
RA ALRREM KLT+
Sbjct: 449 RATALRREMGKLTL 462
>gi|297599916|ref|NP_001048106.2| Os02g0744900 [Oryza sativa Japonica Group]
gi|255671248|dbj|BAF10020.2| Os02g0744900, partial [Oryza sativa Japonica Group]
Length = 489
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/434 (79%), Positives = 381/434 (87%), Gaps = 2/434 (0%)
Query: 31 RQQKFRVSAAKTSPKL-TNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPC 89
R + AA +SPKL + R LRVAV+GGGPAGGAAAE LAK GVET LIERKLDNCKPC
Sbjct: 56 RMARLVTRAAASSPKLPSGRRLRVAVVGGGPAGGAAAEALAKGGVETVLIERKLDNCKPC 115
Query: 90 GGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYL 149
GGAIPLCMV EFDLPLD++DRKV KMKMISPSNVAVDIG TL PHEYIGMVRREVLDAYL
Sbjct: 116 GGAIPLCMVSEFDLPLDLVDRKVRKMKMISPSNVAVDIGGTLAPHEYIGMVRREVLDAYL 175
Query: 150 RERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVG-EKRTLEVDAVIGADG 208
R RAE GA V+NGLF++ + P+ YV++Y YD + G G EKRT EVDA++GADG
Sbjct: 176 RSRAEGAGAEVVNGLFLRYEAPKEPNGSYVVHYNHYDSSNGKAGGEKRTFEVDAIVGADG 235
Query: 209 ANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDH 268
ANSRVAK + AGDY+YAIAFQERVKIPD+KM YYE AEMYVGDDVSPDFYGWVFPKCDH
Sbjct: 236 ANSRVAKDMGAGDYEYAIAFQERVKIPDDKMKYYEERAEMYVGDDVSPDFYGWVFPKCDH 295
Query: 269 VAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGD 328
VAVGTGTVTHK DIKKFQ ATR RAKD+I GGKIIRVEAHPIPEHPRP+R++GRV LVGD
Sbjct: 296 VAVGTGTVTHKPDIKKFQAATRLRAKDRIEGGKIIRVEAHPIPEHPRPKRVAGRVTLVGD 355
Query: 329 AAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKV 388
AAGYVTKCSGEGIYFAAKSGRMCAEAI+ GS NGTRM++E DLR+YL ++D+ YWPTYKV
Sbjct: 356 AAGYVTKCSGEGIYFAAKSGRMCAEAIVAGSANGTRMVEESDLRRYLAEFDRLYWPTYKV 415
Query: 389 LDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
LDVLQKVFYRSN AREAFVEMCAD+YVQ+MTFDSYLYKRVVPGNPL+D+KLAVNTIGSLV
Sbjct: 416 LDVLQKVFYRSNAAREAFVEMCADDYVQRMTFDSYLYKRVVPGNPLDDIKLAVNTIGSLV 475
Query: 449 RANALRREMDKLTI 462
RA ALRREM+K+T+
Sbjct: 476 RATALRREMEKVTL 489
>gi|75133295|sp|Q6Z2T6.1|CHLP_ORYSJ RecName: Full=Geranylgeranyl diphosphate reductase, chloroplastic;
AltName: Full=Geranylgeranyl reductase; Flags: Precursor
gi|46390105|dbj|BAD15541.1| putative geranylgeranyl reductase [Oryza sativa Japonica Group]
gi|46390642|dbj|BAD16125.1| putative geranylgeranyl reductase [Oryza sativa Japonica Group]
gi|125541116|gb|EAY87511.1| hypothetical protein OsI_08917 [Oryza sativa Indica Group]
gi|125583668|gb|EAZ24599.1| hypothetical protein OsJ_08361 [Oryza sativa Japonica Group]
gi|215692844|dbj|BAG88184.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 463
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/434 (79%), Positives = 381/434 (87%), Gaps = 2/434 (0%)
Query: 31 RQQKFRVSAAKTSPKL-TNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPC 89
R + AA +SPKL + R LRVAV+GGGPAGGAAAE LAK GVET LIERKLDNCKPC
Sbjct: 30 RMARLVTRAAASSPKLPSGRRLRVAVVGGGPAGGAAAEALAKGGVETVLIERKLDNCKPC 89
Query: 90 GGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYL 149
GGAIPLCMV EFDLPLD++DRKV KMKMISPSNVAVDIG TL PHEYIGMVRREVLDAYL
Sbjct: 90 GGAIPLCMVSEFDLPLDLVDRKVRKMKMISPSNVAVDIGGTLAPHEYIGMVRREVLDAYL 149
Query: 150 RERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVG-EKRTLEVDAVIGADG 208
R RAE GA V+NGLF++ + P+ YV++Y YD + G G EKRT EVDA++GADG
Sbjct: 150 RSRAEGAGAEVVNGLFLRYEAPKEPNGSYVVHYNHYDSSNGKAGGEKRTFEVDAIVGADG 209
Query: 209 ANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDH 268
ANSRVAK + AGDY+YAIAFQERVKIPD+KM YYE AEMYVGDDVSPDFYGWVFPKCDH
Sbjct: 210 ANSRVAKDMGAGDYEYAIAFQERVKIPDDKMKYYEERAEMYVGDDVSPDFYGWVFPKCDH 269
Query: 269 VAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGD 328
VAVGTGTVTHK DIKKFQ ATR RAKD+I GGKIIRVEAHPIPEHPRP+R++GRV LVGD
Sbjct: 270 VAVGTGTVTHKPDIKKFQAATRLRAKDRIEGGKIIRVEAHPIPEHPRPKRVAGRVTLVGD 329
Query: 329 AAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKV 388
AAGYVTKCSGEGIYFAAKSGRMCAEAI+ GS NGTRM++E DLR+YL ++D+ YWPTYKV
Sbjct: 330 AAGYVTKCSGEGIYFAAKSGRMCAEAIVAGSANGTRMVEESDLRRYLAEFDRLYWPTYKV 389
Query: 389 LDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
LDVLQKVFYRSN AREAFVEMCAD+YVQ+MTFDSYLYKRVVPGNPL+D+KLAVNTIGSLV
Sbjct: 390 LDVLQKVFYRSNAAREAFVEMCADDYVQRMTFDSYLYKRVVPGNPLDDIKLAVNTIGSLV 449
Query: 449 RANALRREMDKLTI 462
RA ALRREM+K+T+
Sbjct: 450 RATALRREMEKVTL 463
>gi|219886379|gb|ACL53564.1| unknown [Zea mays]
Length = 381
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/381 (81%), Positives = 345/381 (90%), Gaps = 1/381 (0%)
Query: 83 LDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRR 142
+DNCKPCGGAIPLCMV EFDLPLD++DRKV KMKMISPSNVAVDIG+TL PHEYIGMVRR
Sbjct: 1 MDNCKPCGGAIPLCMVSEFDLPLDLVDRKVRKMKMISPSNVAVDIGRTLAPHEYIGMVRR 60
Query: 143 EVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVG-EKRTLEVD 201
EVLDAYLR RA+ GA V+NGLF++ + P+ YV++Y YDG+ G VG EKR+ EVD
Sbjct: 61 EVLDAYLRSRAQSVGAEVVNGLFLRYEAPKEPNGSYVVHYNHYDGSNGKVGGEKRSFEVD 120
Query: 202 AVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGW 261
A++GADGANSRVAK + AGDY+YAIAFQERVKIPD+KMVYYE AEMYVGDDVSPDFYGW
Sbjct: 121 AIVGADGANSRVAKDMGAGDYEYAIAFQERVKIPDDKMVYYEERAEMYVGDDVSPDFYGW 180
Query: 262 VFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSG 321
VFPKCDHVAVGTGTVTHK DIKKFQ ATR RAKDKI GGKIIRVEAHPIPEHPRP+R+SG
Sbjct: 181 VFPKCDHVAVGTGTVTHKADIKKFQAATRLRAKDKIEGGKIIRVEAHPIPEHPRPKRVSG 240
Query: 322 RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKT 381
RV LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+ GS NGTRM++E DLRKYL ++D+
Sbjct: 241 RVTLVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVAGSANGTRMVEESDLRKYLAEFDRL 300
Query: 382 YWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAV 441
YWPTYKVLD+LQKVFYRSN AREAFVEMCAD+YVQKMTFDSYLYKRVVPGNPL+D+KLAV
Sbjct: 301 YWPTYKVLDILQKVFYRSNAAREAFVEMCADDYVQKMTFDSYLYKRVVPGNPLDDIKLAV 360
Query: 442 NTIGSLVRANALRREMDKLTI 462
NTIGSLVRA ALRREM+K+T+
Sbjct: 361 NTIGSLVRATALRREMEKVTL 381
>gi|302853314|ref|XP_002958173.1| hypothetical protein VOLCADRAFT_77841 [Volvox carteri f.
nagariensis]
gi|300256534|gb|EFJ40798.1| hypothetical protein VOLCADRAFT_77841 [Volvox carteri f.
nagariensis]
Length = 508
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/419 (74%), Positives = 355/419 (84%), Gaps = 4/419 (0%)
Query: 37 VSAAKTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLC 96
V A + L R LRVAVIGGGP+G AAETLAK GVET+LIERKLDNCKPCGGAIPLC
Sbjct: 70 VFALRDGAALDGRKLRVAVIGGGPSGACAAETLAKGGVETYLIERKLDNCKPCGGAIPLC 129
Query: 97 MVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKN 156
MV EFDLPL+IIDRKVTKMKMISPSN VD+G+TL E+IGM RREV D +LR+RAEK
Sbjct: 130 MVEEFDLPLEIIDRKVTKMKMISPSNREVDVGKTLSETEWIGMCRREVFDDFLRKRAEKL 189
Query: 157 GASVINGLFMKMDLPRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA+++NGLFM+ + + + P+ ++YT Y DG+K +G TLEVD +IGADGANSRVAK
Sbjct: 190 GANIVNGLFMRSE-KQGSDGPFTIHYTSYADGSK--MGTPSTLEVDMIIGADGANSRVAK 246
Query: 216 SINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGT 275
I+AG+YDYAIAFQER++IPD+KM YYENLAEMYVGDDVSPDFYGWVFPK DHVAVGTGT
Sbjct: 247 EIDAGEYDYAIAFQERIRIPDDKMKYYENLAEMYVGDDVSPDFYGWVFPKYDHVAVGTGT 306
Query: 276 VTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTK 335
V +K IK++Q ATR+R+K K GGKIIRVEAHPIPEHPRPRR GRVALVGDAAGYVTK
Sbjct: 307 VVNKTAIKQYQQATRDRSKVKTEGGKIIRVEAHPIPEHPRPRRCKGRVALVGDAAGYVTK 366
Query: 336 CSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKV 395
CSGEGIYFAAKSGRMCAEAI+E S NGT+M E +R YL+KWD+ YW TYKVLD+LQKV
Sbjct: 367 CSGEGIYFAAKSGRMCAEAIVEASANGTKMAGEDAIRVYLDKWDRKYWATYKVLDILQKV 426
Query: 396 FYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALR 454
FYRSNPAREAFVE+C D YVQKMTFDSYLYK VVPGNPL+D+KL V T+ SL+R+NALR
Sbjct: 427 FYRSNPAREAFVELCEDSYVQKMTFDSYLYKTVVPGNPLDDVKLLVRTVSSLLRSNALR 485
>gi|159464036|ref|XP_001690248.1| geranylgeranyl reductase [Chlamydomonas reinhardtii]
gi|158284236|gb|EDP09986.1| geranylgeranyl reductase [Chlamydomonas reinhardtii]
Length = 504
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/455 (69%), Positives = 373/455 (81%), Gaps = 7/455 (1%)
Query: 1 MASMALKSFTGLRQSPQEQQHPHFIAQALPRQQKFRVSAAKTSPKLTNRNLRVAVIGGGP 60
+A + +F+G+ PQ +Q A+++ R + V A K L R LRVAVIGGGP
Sbjct: 33 VAQLPSSTFSGV-TVPQ-RQFAVSGARSVSRAVQ-SVFAVKDGAALEGRKLRVAVIGGGP 89
Query: 61 AGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISP 120
+G AAETLAK GVETFL+ERKLDNCKPCGGAIPLCMV EFDLP++IIDR+VTKMKMISP
Sbjct: 90 SGACAAETLAKGGVETFLLERKLDNCKPCGGAIPLCMVEEFDLPMEIIDRRVTKMKMISP 149
Query: 121 SNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVL 180
SN VD+G+TL E+IGM RREV D YLR RA+K GA+++NGLFM+ + ++ E P+ +
Sbjct: 150 SNREVDVGKTLSETEWIGMCRREVFDDYLRNRAQKLGANIVNGLFMRSE-QQSAEGPFTI 208
Query: 181 YYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKM 239
+Y Y DG+K +G+ TLEVD +IGADGANSR+AK I+AG+YDYAIAFQER++IPD+KM
Sbjct: 209 HYNSYEDGSK--MGKPATLEVDMIIGADGANSRIAKEIDAGEYDYAIAFQERIRIPDDKM 266
Query: 240 VYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILG 299
YYENLAEMYVGDDVSPDFYGWVFPK DHVAVGTGTV +K IK++Q ATR+R+K K G
Sbjct: 267 KYYENLAEMYVGDDVSPDFYGWVFPKYDHVAVGTGTVVNKTAIKQYQQATRDRSKVKTEG 326
Query: 300 GKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGS 359
GKIIRVEAHPIPEHPRPRR GRVALVGDAAGYVTKCSGEGIYFAAKSGRM AEAI+EGS
Sbjct: 327 GKIIRVEAHPIPEHPRPRRCKGRVALVGDAAGYVTKCSGEGIYFAAKSGRMAAEAIVEGS 386
Query: 360 ENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMT 419
NGT+M E +R YL+KWD+ YW TYKVLD+LQKVFYRSNPAREAFVE+C D YVQKMT
Sbjct: 387 ANGTKMCGEDAIRVYLDKWDRKYWTTYKVLDILQKVFYRSNPAREAFVELCEDSYVQKMT 446
Query: 420 FDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALR 454
FDSYLYK VVPGNPL+D+KL V T+ S++R+NALR
Sbjct: 447 FDSYLYKTVVPGNPLDDVKLLVRTVSSILRSNALR 481
>gi|412990444|emb|CCO19762.1| geranylgeranyl reductase [Bathycoccus prasinos]
Length = 465
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/410 (78%), Positives = 355/410 (86%), Gaps = 3/410 (0%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPL 105
L R LRVAVIGGGPAG AAETLAK G ETFL+ERK+DNCKPCGGAIPLCMVGEFDLP
Sbjct: 48 LDGRKLRVAVIGGGPAGACAAETLAKGGCETFLVERKMDNCKPCGGAIPLCMVGEFDLPE 107
Query: 106 DIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
+IIDRKVTKMKMISPSN AVD+GQTL EYIGM RREV+D +LR+RA+ GA++INGLF
Sbjct: 108 EIIDRKVTKMKMISPSNRAVDVGQTLNDKEYIGMCRREVMDDFLRKRAKALGANLINGLF 167
Query: 166 MKMDLPRNFEQPYVLYYTEYDG-TKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDY 224
MK+D P P L+Y +Y+G +K G+ +T+EVDAVIGADGANSRVAK I+AG+YDY
Sbjct: 168 MKIDDPGVNSGPITLHYNDYEGDSKTGI--PKTIEVDAVIGADGANSRVAKCIDAGEYDY 225
Query: 225 AIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKK 284
AIAFQER+KIPD KM YY+NLAEMYVGDDVSPDFYGWVFPK DHVAVGTGTV +K IK+
Sbjct: 226 AIAFQERIKIPDAKMDYYKNLAEMYVGDDVSPDFYGWVFPKYDHVAVGTGTVVNKTAIKQ 285
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
+Q A RNRA+DK GGKIIRVEAHPIPEHPRP R+ GRVALVGDAAGYVTKCSGEGIYFA
Sbjct: 286 YQTAMRNRAEDKCAGGKIIRVEAHPIPEHPRPNRVRGRVALVGDAAGYVTKCSGEGIYFA 345
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPARE 404
AKSGRM AEAI+E S NGT+ IDE DLR YL+KWD+ YW TYKVLD+LQKVFYRSNPARE
Sbjct: 346 AKSGRMAAEAIVEQSMNGTKEIDESDLRVYLDKWDRKYWATYKVLDILQKVFYRSNPARE 405
Query: 405 AFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALR 454
AFVEMCADEYVQKMTFDSYLYK VVPGNPL+D KL VNTIGSLVRA ALR
Sbjct: 406 AFVEMCADEYVQKMTFDSYLYKTVVPGNPLDDGKLLVNTIGSLVRATALR 455
>gi|384244672|gb|EIE18171.1| putative plastid geranylgeranyl reductase precursor [Coccomyxa
subellipsoidea C-169]
Length = 464
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 313/427 (73%), Positives = 356/427 (83%), Gaps = 7/427 (1%)
Query: 31 RQQKFRVSAAKTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCG 90
R RV A K L +R LRVAVIGGGP+G AETLA GVETFLIERKLDNCKPCG
Sbjct: 26 RAVGLRVCAIKDGAVL-DRKLRVAVIGGGPSGACTAETLASGGVETFLIERKLDNCKPCG 84
Query: 91 GAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLR 150
GAIPLCMV EF++P +IIDRKVTKMKMISPSN VD+G+TL EYIGM RREVLDAYLR
Sbjct: 85 GAIPLCMVDEFNIPAEIIDRKVTKMKMISPSNREVDVGKTLSETEYIGMCRREVLDAYLR 144
Query: 151 ERAEKNGASVINGLFMKM--DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208
+RA+ NGA+V NGLFM+M D P E Y +++ Y+ G VG+ ++++VDAV+GADG
Sbjct: 145 DRAKSNGATVYNGLFMRMEKDGP---EGGYTVHFNSYE-EGGKVGKPQSIKVDAVVGADG 200
Query: 209 ANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDH 268
ANSRVAK I+AG+YDYAIAFQER++IPD+KM YY +LAEMYVGDDVSPDFYGWVFPK DH
Sbjct: 201 ANSRVAKEIDAGEYDYAIAFQERIRIPDDKMAYYMDLAEMYVGDDVSPDFYGWVFPKYDH 260
Query: 269 VAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGD 328
VAVGTGTV +K IK++Q ATR+R+K K GGKIIRVEAHPIPEHPRPRR GRVALVGD
Sbjct: 261 VAVGTGTVINKSGIKQYQQATRDRSKVKTEGGKIIRVEAHPIPEHPRPRRAQGRVALVGD 320
Query: 329 AAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKV 388
AAGYVTKCSGEGIYFAAKSGRMCAEAI+ GS+NGTRM+ E DL YL K+D YW TYKV
Sbjct: 321 AAGYVTKCSGEGIYFAAKSGRMCAEAIVAGSKNGTRMVSEQDLNVYLSKFDTKYWLTYKV 380
Query: 389 LDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
LD+LQKVFYRSNPAREAFVEMC EYVQ+MTFDSYLYK VVPGNPL+D KLA +T+GSL+
Sbjct: 381 LDILQKVFYRSNPAREAFVEMCESEYVQRMTFDSYLYKTVVPGNPLDDAKLAFDTLGSLL 440
Query: 449 RANALRR 455
R NALR+
Sbjct: 441 RGNALRQ 447
>gi|255083236|ref|XP_002504604.1| predicted protein [Micromonas sp. RCC299]
gi|226519872|gb|ACO65862.1| predicted protein [Micromonas sp. RCC299]
Length = 467
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 313/409 (76%), Positives = 352/409 (86%), Gaps = 1/409 (0%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPL 105
L R LRVAVIGGGPAG AAETLAK G ETFLIERK+DNCKPCGGAIPLCMVGEFDLP
Sbjct: 51 LDGRKLRVAVIGGGPAGACAAETLAKGGCETFLIERKMDNCKPCGGAIPLCMVGEFDLPE 110
Query: 106 DIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
+IIDRKVTKMKMISPSN AVD+GQTL EYIGM RREV+D +LR+RA+ G +++NGLF
Sbjct: 111 EIIDRKVTKMKMISPSNRAVDVGQTLNDKEYIGMCRREVMDDFLRKRAKSLGTNLVNGLF 170
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
MK+D P P ++Y +Y+ VGE +T+EVD VIGADGANSRVAK+I+AG+YDYA
Sbjct: 171 MKLDDPGQGNGPITIHYNDYEAD-AKVGEPKTMEVDVVIGADGANSRVAKNIDAGEYDYA 229
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKF 285
IAFQER+KIPDEKM YY++LAEMYVGDDVSPDFYGWVFPK DHVAVGTGTV +K IK++
Sbjct: 230 IAFQERIKIPDEKMDYYKDLAEMYVGDDVSPDFYGWVFPKYDHVAVGTGTVVNKTAIKQY 289
Query: 286 QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAA 345
Q A R RA++K GGKIIRVEAHPIPEHPRPRR+ GRV LVGDAAGYVTKCSGEGIYFAA
Sbjct: 290 QAAMRKRAEEKCAGGKIIRVEAHPIPEHPRPRRVQGRVTLVGDAAGYVTKCSGEGIYFAA 349
Query: 346 KSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREA 405
KSGRM AEA++E S+NGT+ +DE DLR YL+KWD+ YW TYKVLD+LQKVFYRSNPAREA
Sbjct: 350 KSGRMAAEAVVERSQNGTKEVDESDLRVYLDKWDRKYWATYKVLDILQKVFYRSNPAREA 409
Query: 406 FVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALR 454
FVEMCADEYVQKMTFDSYLYK VVPGNPL+D KL NTI S+VRANALR
Sbjct: 410 FVEMCADEYVQKMTFDSYLYKTVVPGNPLDDAKLLGNTIASIVRANALR 458
>gi|209402465|gb|ACI45955.1| putative plastid geranylgeranyl reductase precursor [Mantoniella
squamata]
Length = 467
Score = 632 bits (1631), Expect = e-178, Method: Compositional matrix adjust.
Identities = 311/410 (75%), Positives = 353/410 (86%), Gaps = 1/410 (0%)
Query: 45 KLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLP 104
K NR LRVAV+GGGPAG AAETLAK G ETFLIERK+DNCKPCGGAIPLCMVGEFDLP
Sbjct: 50 KPLNRKLRVAVVGGGPAGACAAETLAKGGCETFLIERKMDNCKPCGGAIPLCMVGEFDLP 109
Query: 105 LDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
+IIDRKVTKMKMISPSN AVD+GQTL EYIGM RREV+D +LR+RA+ G ++INGL
Sbjct: 110 EEIIDRKVTKMKMISPSNRAVDVGQTLNDKEYIGMCRREVMDDFLRKRAKSLGTNLINGL 169
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDY 224
FMK++ P P ++Y +Y+ VGE +T+EVD VIGADGANSRVAK+I+AG+YDY
Sbjct: 170 FMKLEDPGVGNGPITIHYNDYEA-DAKVGEAKTMEVDVVIGADGANSRVAKNIDAGEYDY 228
Query: 225 AIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKK 284
AIAFQER+KIPDEKM YY++LAEMYVGDDVSPDFYGWVFPK DHVAVGTGTV +K IK
Sbjct: 229 AIAFQERIKIPDEKMEYYKDLAEMYVGDDVSPDFYGWVFPKYDHVAVGTGTVVNKTAIKT 288
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
+Q A R RA++K GGKIIRVEAHPIPEHPRPRR+ GRV LVGDAAGYVTKCSGEGIYFA
Sbjct: 289 YQAAMRKRAEEKCAGGKIIRVEAHPIPEHPRPRRVQGRVTLVGDAAGYVTKCSGEGIYFA 348
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPARE 404
AKSGRM AEA++E S+NGT +DE DLR+YL+KWD+ YW TYKVLD+LQKVFYRSNPARE
Sbjct: 349 AKSGRMAAEAVVERSQNGTLEVDESDLREYLDKWDRKYWATYKVLDILQKVFYRSNPARE 408
Query: 405 AFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALR 454
AFVEMCADEYVQKMTFDSYLYK VVPGNP++D+KL NT+ S+VRANALR
Sbjct: 409 AFVEMCADEYVQKMTFDSYLYKTVVPGNPIDDIKLLGNTVASIVRANALR 458
>gi|308800570|ref|XP_003075066.1| Ggh geranylgeranyl reductase (IC) [Ostreococcus tauri]
gi|119358874|emb|CAL52338.2| Ggh geranylgeranyl reductase (IC) [Ostreococcus tauri]
Length = 462
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 313/409 (76%), Positives = 352/409 (86%), Gaps = 1/409 (0%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPL 105
LT+R LRVAVIGGGPAG AAETLAK G ET+LIERK+DNCKPCGGAIPLCMVGEFDLP
Sbjct: 46 LTDRKLRVAVIGGGPAGACAAETLAKGGCETYLIERKMDNCKPCGGAIPLCMVGEFDLPE 105
Query: 106 DIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
+IIDRKVTKMKMISPSN AVD+GQTL EYIGM RREV+D +LR+RA GA+++NGLF
Sbjct: 106 EIIDRKVTKMKMISPSNRAVDVGQTLNDKEYIGMCRREVMDDFLRKRANSLGANLVNGLF 165
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
MK++ P P ++ Y +Y+ + G +TLEVD VIGADGANSRVAK I+AG+YDYA
Sbjct: 166 MKIEDPGQGNGPILVQYNDYE-EESKTGVPKTLEVDVVIGADGANSRVAKCIDAGEYDYA 224
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKF 285
IAFQER+KIPDEKM YY++LAEMYVGDDVSPDFYGWVFPK DHVAVGTGTV +K IK++
Sbjct: 225 IAFQERIKIPDEKMEYYKDLAEMYVGDDVSPDFYGWVFPKYDHVAVGTGTVVNKTAIKQY 284
Query: 286 QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAA 345
Q A RNRA++K GGKIIRVEAHPIPEHPRP R+ GRVALVGDAAGYVTKCSGEGIYFAA
Sbjct: 285 QTAMRNRAEEKCEGGKIIRVEAHPIPEHPRPNRVKGRVALVGDAAGYVTKCSGEGIYFAA 344
Query: 346 KSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREA 405
KSGRM AEA++E S NGT+ IDE DLR YL+KWD+ YW TYKVLD+LQKVFYRSNPAREA
Sbjct: 345 KSGRMAAEAVVEQSMNGTKEIDESDLRVYLDKWDRKYWATYKVLDILQKVFYRSNPAREA 404
Query: 406 FVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALR 454
FVEMCADEYVQKMTFDSYLYK VVPGNPL+D KL NT+ SLVR+NALR
Sbjct: 405 FVEMCADEYVQKMTFDSYLYKTVVPGNPLDDAKLLANTVASLVRSNALR 453
>gi|145342134|ref|XP_001416148.1| geranylgeranyl reductase [Ostreococcus lucimarinus CCE9901]
gi|144576373|gb|ABO94441.1| geranylgeranyl reductase [Ostreococcus lucimarinus CCE9901]
Length = 462
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 317/429 (73%), Positives = 359/429 (83%), Gaps = 6/429 (1%)
Query: 26 AQALPRQQKFRVSAAKTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDN 85
A+ PR V A +P LT+R LRVAVIGGGPAG AAETLAK G ETFLIERK+DN
Sbjct: 31 ARVTPRN----VVTASGAP-LTDRKLRVAVIGGGPAGACAAETLAKGGCETFLIERKMDN 85
Query: 86 CKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVL 145
CKPCGGAIPLCMVGEFDLP +IIDRKVTKMKMISPSN AVD+GQTL EYIGM RREV+
Sbjct: 86 CKPCGGAIPLCMVGEFDLPEEIIDRKVTKMKMISPSNRAVDVGQTLNDKEYIGMCRREVM 145
Query: 146 DAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIG 205
D +LR+RA+ GA+++NGLFMK++ P P ++ Y +Y+ + G +TLEVD VIG
Sbjct: 146 DDFLRKRAKSLGANLVNGLFMKIEDPGQGNGPIMVQYNDYE-EESKTGVPKTLEVDVVIG 204
Query: 206 ADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPK 265
ADGANSRVAK I+AG+YDYAIAFQER+KIPD KM YY++LAEMYVGDDVSPDFYGWVFPK
Sbjct: 205 ADGANSRVAKCIDAGEYDYAIAFQERIKIPDAKMEYYKDLAEMYVGDDVSPDFYGWVFPK 264
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVAL 325
DHVAVGTGTV +K IK++Q A RNRA++K GGKIIRVEAHPIPEHPRP R+ GRVAL
Sbjct: 265 YDHVAVGTGTVVNKTAIKQYQTAMRNRAEEKCEGGKIIRVEAHPIPEHPRPNRVKGRVAL 324
Query: 326 VGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPT 385
VGDAAGYVTKCSGEGIYFAAKSGRM AEA++E S NGT+ I E DLR YL+KWD+ YW T
Sbjct: 325 VGDAAGYVTKCSGEGIYFAAKSGRMAAEAVVEQSMNGTKEIGETDLRVYLDKWDRKYWAT 384
Query: 386 YKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIG 445
YKVLD+LQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYK VVPGNPL+D KL NT+
Sbjct: 385 YKVLDILQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKTVVPGNPLDDAKLLANTVA 444
Query: 446 SLVRANALR 454
SL+R+NALR
Sbjct: 445 SLMRSNALR 453
>gi|307111103|gb|EFN59338.1| hypothetical protein CHLNCDRAFT_29491, partial [Chlorella
variabilis]
Length = 497
Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust.
Identities = 304/442 (68%), Positives = 356/442 (80%), Gaps = 12/442 (2%)
Query: 14 QSPQEQQHPHFIAQALPRQQKFRVSAAKTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNG 73
QS +QQ Q R +V A + L +R LRVAVIGGGP+G AE+LAK G
Sbjct: 47 QSSSKQQ------QGASRSAALKVFAVRDGTPL-DRPLRVAVIGGGPSGACCAESLAKGG 99
Query: 74 VETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKP 133
VE FLIERK+DNCKPCGGAIP+CMV EFDLP++IIDR+VTKMKMISPSN VD+G+TL
Sbjct: 100 VEAFLIERKMDNCKPCGGAIPICMVEEFDLPMEIIDRRVTKMKMISPSNREVDVGKTLND 159
Query: 134 HEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEY-DGTKGGV 192
E+IGM RREV D +LR+RA K GA+VINGL+M M+ + + P L Y +Y +G K V
Sbjct: 160 KEWIGMCRREVFDDFLRKRAAKLGANVINGLYMGME--QQGDGPITLRYNKYNEGDK--V 215
Query: 193 GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGD 252
G TLEVD VIGADGANSRVAK I+AG+YDYAIAFQER++IP++KM YY++LAEMYVGD
Sbjct: 216 GTPSTLEVDVVIGADGANSRVAKDIDAGEYDYAIAFQERIRIPEDKMEYYKDLAEMYVGD 275
Query: 253 DVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPE 312
DVSPDFYGWVFPK DHVAVGTGTV +K IK++Q ATR+RAK K GG+IIRVEAHPIPE
Sbjct: 276 DVSPDFYGWVFPKYDHVAVGTGTVVNKTAIKQYQQATRDRAKVKTEGGQIIRVEAHPIPE 335
Query: 313 HPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLR 372
HPRPRR+ GRV LVGDAAGYVTKCSGEGIYFAAKSGRM EA+++ SE G +M E LR
Sbjct: 336 HPRPRRVKGRVTLVGDAAGYVTKCSGEGIYFAAKSGRMAGEALVKASEGGKKMAGERALR 395
Query: 373 KYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGN 432
YL+++D+ YW TYKVLD+LQKVFYRSNPAREAFVEMC YVQKMTFDSYLYK VVPGN
Sbjct: 396 NYLDEFDRKYWATYKVLDILQKVFYRSNPAREAFVEMCESNYVQKMTFDSYLYKTVVPGN 455
Query: 433 PLEDLKLAVNTIGSLVRANALR 454
PL+D+KL V+T+GSL+R+NALR
Sbjct: 456 PLDDVKLLVDTVGSLLRSNALR 477
>gi|303280980|ref|XP_003059782.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458437|gb|EEH55734.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 380
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 280/372 (75%), Positives = 321/372 (86%), Gaps = 1/372 (0%)
Query: 83 LDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRR 142
+DNCKPCGGAIPLCMVGEFDLP +IIDRKVTKMKMISPSN AVD+GQTL EYIGM RR
Sbjct: 1 MDNCKPCGGAIPLCMVGEFDLPEEIIDRKVTKMKMISPSNRAVDVGQTLNDKEYIGMCRR 60
Query: 143 EVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDA 202
EV+D +LR+RA+ G +++NGLFMK++ P ++Y +Y+ VGE +T+EVD
Sbjct: 61 EVMDDFLRKRAKSLGTNLVNGLFMKLEDPGQGNGAITIHYNDYEA-DSKVGEPKTMEVDC 119
Query: 203 VIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWV 262
+IGADGANSRVAK+I+AG+YDYAIAFQER+KIPDEKM YY++LAEMYVGDDVSPDFYGWV
Sbjct: 120 IIGADGANSRVAKNIDAGEYDYAIAFQERIKIPDEKMEYYKDLAEMYVGDDVSPDFYGWV 179
Query: 263 FPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR 322
FPK DHVAVGTGTV +K IK +Q A R RA++K GGKIIRVEAHPIPEHPRPRR+ GR
Sbjct: 180 FPKYDHVAVGTGTVVNKTAIKTYQAAMRKRAEEKCAGGKIIRVEAHPIPEHPRPRRVQGR 239
Query: 323 VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTY 382
V LVGDAAGYVTKCSGEGIYFAAKSGRM AEA++E SENGT+ +DE DLR YL+KWD+ Y
Sbjct: 240 VTLVGDAAGYVTKCSGEGIYFAAKSGRMAAEAVVERSENGTKEVDESDLRLYLDKWDRKY 299
Query: 383 WPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVN 442
W TYKVLD+LQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYK VVPGNPL+D+KL N
Sbjct: 300 WATYKVLDILQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKTVVPGNPLDDMKLLGN 359
Query: 443 TIGSLVRANALR 454
T+ S+VRANALR
Sbjct: 360 TVASIVRANALR 371
>gi|170079071|ref|YP_001735709.1| geranylgeranyl reductase [Synechococcus sp. PCC 7002]
gi|169886740|gb|ACB00454.1| geranylgeranyl reductase [Synechococcus sp. PCC 7002]
Length = 407
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 277/405 (68%), Positives = 332/405 (81%), Gaps = 4/405 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+GGGPAG +AAE LAK G+ET++ ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 3 LRVAVVGGGPAGSSAAEILAKAGIETYIFERKLDNAKPCGGAIPLCMVDEFDLPPEIIDR 62
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSN+ V+IGQTLK EYIGM RREV+D+++R RA GA++ING K+++
Sbjct: 63 RVRKMKMISPSNIEVNIGQTLKDDEYIGMCRREVMDSFMRNRAADLGATLINGTVFKLEI 122
Query: 171 PRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P N PYVL+Y+ D + G V GE +TL+VD V+GADGANSRVAK+I+AGDY+YAIAFQ
Sbjct: 123 PNNNTDPYVLHYS--DHSNGEVKGEMKTLKVDLVVGADGANSRVAKAIDAGDYNYAIAFQ 180
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER+++P++KM YYE LAEMYVGDDVSPDFY WVFPK DHVAVGTGT+ ++ IK+ Q
Sbjct: 181 ERIRLPEDKMAYYEELAEMYVGDDVSPDFYAWVFPKYDHVAVGTGTMKVNQAKIKQLQAG 240
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA ++ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS
Sbjct: 241 IRARAAKRLEGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSA 300
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+E S NG R+ E DL++YL++WDK Y TY VLD+LQ+VFYRS+ REAFVE
Sbjct: 301 RMCAEVIVEASNNGQRVPTEADLKQYLKRWDKQYGATYLVLDILQRVFYRSDATREAFVE 360
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MCAD VQK+TFDSYLYK VVP NPL+ +K+ TIGSL+R NAL
Sbjct: 361 MCADIDVQKLTFDSYLYKTVVPANPLKQMKITAKTIGSLLRGNAL 405
>gi|428773789|ref|YP_007165577.1| geranylgeranyl reductase [Cyanobacterium stanieri PCC 7202]
gi|428688068|gb|AFZ47928.1| geranylgeranyl reductase [Cyanobacterium stanieri PCC 7202]
Length = 407
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 277/406 (68%), Positives = 330/406 (81%), Gaps = 4/406 (0%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
+RVAV+GGGP+G +AAE LAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IID
Sbjct: 2 TIRVAVVGGGPSGSSAAEVLAKAGIETYLFERKLDNAKPCGGAIPLCMVDEFDLPPEIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSN+ V+IGQTLK +EYIGM RREVLD ++R+RA K GA++ING ++D
Sbjct: 62 RRVRKMKMISPSNIEVNIGQTLKDNEYIGMCRREVLDGFMRDRAAKLGANLINGTVYQLD 121
Query: 170 LPRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
+P N PY L+Y ++ +GT GE +TL+VD VIGADGANSR+AK+I+AGDY+YAIAF
Sbjct: 122 IPDNDNDPYTLHYADHSNGT--AQGEMKTLKVDLVIGADGANSRIAKAIDAGDYNYAIAF 179
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQL 287
QER+K+P++KM YYE LAEMYVG+DVSPDFY WVFPK DHVAVGTGT+ +K IK Q
Sbjct: 180 QERIKLPEDKMAYYEELAEMYVGNDVSPDFYAWVFPKYDHVAVGTGTMKVNKAMIKDLQA 239
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
R RA ++ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS
Sbjct: 240 GIRQRAAKRLEGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKS 299
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
RMCAE I+E S NG ++ E DL+ YL++WDK Y TY VLD+LQ+VFYRS+ REAFV
Sbjct: 300 ARMCAEVIVETSNNGQKVPSEADLKTYLKRWDKQYGATYLVLDILQRVFYRSDATREAFV 359
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EMCAD VQK+TFDSYLYK VVP NPL LK+ TIGSL+R NAL
Sbjct: 360 EMCADIDVQKITFDSYLYKTVVPANPLTQLKITAKTIGSLLRGNAL 405
>gi|428770141|ref|YP_007161931.1| geranylgeranyl reductase [Cyanobacterium aponinum PCC 10605]
gi|428684420|gb|AFZ53887.1| geranylgeranyl reductase [Cyanobacterium aponinum PCC 10605]
Length = 407
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 275/406 (67%), Positives = 331/406 (81%), Gaps = 4/406 (0%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
+RVAV+GGGPAG + AE LAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IID
Sbjct: 2 TIRVAVVGGGPAGSSTAEVLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSN+ V+IGQTLK EYIGM RREVLD ++R+RA K GA++ING ++D
Sbjct: 62 RRVRKMKMISPSNIEVNIGQTLKDDEYIGMCRREVLDGFMRDRAAKLGANLINGTVYQLD 121
Query: 170 LPRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
+P N PYVL+Y ++ +GT GE +TL+VD V+GADGANSR+AK+I+AGDY+YAIAF
Sbjct: 122 IPSNDRDPYVLHYADHSNGT--AQGEMKTLKVDLVVGADGANSRIAKAIDAGDYNYAIAF 179
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQL 287
QER+++P++KM YYE+LAEMYVG+DVSPDFY WVFPK DHVAVGTGT+ +K IK Q
Sbjct: 180 QERIRLPEDKMAYYEDLAEMYVGNDVSPDFYAWVFPKYDHVAVGTGTMKVNKAIIKDLQA 239
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
R RA ++ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS
Sbjct: 240 GIRKRAAKRLEGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKS 299
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GRMCAE I+E S NG ++ E DL+ Y+++WDK Y TY VLD+LQ+VFYRS+ REAFV
Sbjct: 300 GRMCAEMIVEASNNGQKVPSEADLKTYIKRWDKKYGATYLVLDILQRVFYRSDATREAFV 359
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EMCAD VQK+TFDSYLYK VVP NPL +K+ TIGSL+R NAL
Sbjct: 360 EMCADIDVQKITFDSYLYKTVVPSNPLVQMKITAKTIGSLLRGNAL 405
>gi|411116520|ref|ZP_11389007.1| geranylgeranyl reductase [Oscillatoriales cyanobacterium JSC-12]
gi|410712623|gb|EKQ70124.1| geranylgeranyl reductase [Oscillatoriales cyanobacterium JSC-12]
Length = 407
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 283/405 (69%), Positives = 329/405 (81%), Gaps = 4/405 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+GGGPAG +AAE LAK G+ET+LIERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 3 LRVAVVGGGPAGSSAAEVLAKAGIETYLIERKLDNVKPCGGAIPLCMVSEFDLPPEIIDR 62
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSN+ V+IG TLK EYIGM RREVLD +LR RAEK GA VING +++
Sbjct: 63 RVRKMKMISPSNIEVNIGSTLKDDEYIGMCRREVLDGFLRTRAEKLGAKVINGTMHTLEI 122
Query: 171 PRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P + + YVL+Y ++ +GT G + +TL+VD VIGADGANSRVAK+I+AGDY+YAIAFQ
Sbjct: 123 PSDDKGAYVLHYADHSNGTLEG--DNKTLQVDLVIGADGANSRVAKAIDAGDYNYAIAFQ 180
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT-HKGDIKKFQLA 288
ER++IPD+KM YYE+LAEMYVGDDVSPDFY WVFPK DHVAVGTGT+ ++ IK+ Q
Sbjct: 181 ERIRIPDDKMAYYEDLAEMYVGDDVSPDFYAWVFPKYDHVAVGTGTMKPNQSRIKELQRG 240
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA K+ GGKIIRVEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS
Sbjct: 241 IRERAAAKLRGGKIIRVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSA 300
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+E S G R+ E DL+ YL++WDK Y TY VLD+LQ+VFYRS+ REAFVE
Sbjct: 301 RMCAETIVEFSNKGDRIPTEQDLKVYLKRWDKQYGATYLVLDLLQRVFYRSDATREAFVE 360
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MC+D VQK+TFDSYLYK VVP NPL LK+ TIGSL+R NAL
Sbjct: 361 MCSDIDVQKLTFDSYLYKTVVPANPLVQLKITAKTIGSLIRGNAL 405
>gi|220907083|ref|YP_002482394.1| geranylgeranyl reductase [Cyanothece sp. PCC 7425]
gi|219863694|gb|ACL44033.1| geranylgeranyl reductase [Cyanothece sp. PCC 7425]
Length = 407
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 278/404 (68%), Positives = 327/404 (80%), Gaps = 2/404 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+GGGPAG +AAE LA+ G+ET+LIERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 3 LRVAVVGGGPAGSSAAEVLARAGIETYLIERKLDNVKPCGGAIPLCMVSEFDLPPEIIDR 62
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSN+ V+IG TLK EYIGM RREVLD +LR+RA GA+VING +DL
Sbjct: 63 RVRKMKMISPSNIEVNIGSTLKQDEYIGMCRREVLDGFLRDRAAHCGATVINGTMHTLDL 122
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
P N PYVL+Y ++ GE +TL+VD VIGADGANSRVA++I+AGDY+YAIAFQE
Sbjct: 123 PSNDRDPYVLHYADHSNGSAA-GENKTLKVDLVIGADGANSRVARAIDAGDYNYAIAFQE 181
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT-HKGDIKKFQLAT 289
R+++P++KM YYE+LAEMYVGDDVSPDFY WVFPK DHVAVGTGT+ ++ IK+ Q
Sbjct: 182 RIRLPEDKMAYYEDLAEMYVGDDVSPDFYAWVFPKYDHVAVGTGTMKPNQARIKQLQAGI 241
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R RA K+ GGKII+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS R
Sbjct: 242 RERAAAKLRGGKIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSAR 301
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
MCAE I+E S+ G R+ E +L+ YL++WD+ Y TYKVLD+LQ VFYRS+ REAFVEM
Sbjct: 302 MCAETIVEFSQGGQRVPTEQELKIYLKRWDRKYGITYKVLDLLQTVFYRSDATREAFVEM 361
Query: 410 CADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
CAD VQK+TFDSYLYK VVP NPL LK+ TIGSL+R +AL
Sbjct: 362 CADLDVQKLTFDSYLYKTVVPANPLVQLKITAKTIGSLLRGHAL 405
>gi|427420182|ref|ZP_18910365.1| geranylgeranyl reductase [Leptolyngbya sp. PCC 7375]
gi|425762895|gb|EKV03748.1| geranylgeranyl reductase [Leptolyngbya sp. PCC 7375]
Length = 422
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 276/405 (68%), Positives = 329/405 (81%), Gaps = 4/405 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+GGGPAG +AAETL K G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 3 LRVAVVGGGPAGSSAAETLVKAGIETYLFERKLDNAKPCGGAIPLCMVDEFDLPPEIIDR 62
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSN+ V+IG TLK EYIGM RREVLD +LR RAEK G VING K+++
Sbjct: 63 RVRKMKMISPSNIEVNIGSTLKDDEYIGMCRREVLDGFLRGRAEKLGTKVINGTVHKVEI 122
Query: 171 PRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P N PY L+Y ++ +GT G + +TL+VD VIGADGANSRVA++I+AGDY+YAIAFQ
Sbjct: 123 PSNDTDPYTLHYADHSNGTLQG--DAKTLQVDMVIGADGANSRVARAIDAGDYNYAIAFQ 180
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER++IPD+KM YYE LAEMYVGDDVSPDFY WVFPK DHVAVGTGT+ ++ IK+ Q
Sbjct: 181 ERIRIPDDKMAYYEELAEMYVGDDVSPDFYAWVFPKYDHVAVGTGTMRVNQAKIKQLQKG 240
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA ++ GG+I++VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKSG
Sbjct: 241 IRERAAKRLEGGEILKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSG 300
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+E S +G R++ E +L+ Y+++WDK Y TY VLD+LQ+VFYRS+ REAFVE
Sbjct: 301 RMCAETIVELSNSGERVLTEAELKTYIKRWDKQYGVTYLVLDILQRVFYRSDATREAFVE 360
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MCAD VQK+TFDSYLYK VVP NP+ +K+ TIGSL+R NAL
Sbjct: 361 MCADIDVQKLTFDSYLYKTVVPANPITQMKITAKTIGSLIRGNAL 405
>gi|427722956|ref|YP_007070233.1| geranylgeranyl reductase [Leptolyngbya sp. PCC 7376]
gi|427354676|gb|AFY37399.1| geranylgeranyl reductase [Leptolyngbya sp. PCC 7376]
Length = 407
Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust.
Identities = 275/405 (67%), Positives = 331/405 (81%), Gaps = 4/405 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+GGGPAG +AAE LAK G+ET++ ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 3 LRVAVVGGGPAGSSAAEILAKAGIETYIFERKLDNAKPCGGAIPLCMVDEFDLPPEIIDR 62
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMK+ISPSN+ V IGQTLK EYIGM RREV+D+++R RA + GA++ING K+++
Sbjct: 63 RVRKMKLISPSNIEVSIGQTLKDDEYIGMCRREVMDSFMRNRAAELGANLINGTVSKLEI 122
Query: 171 PRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P N + PY L+Y+ D ++G + GE +TL+VD VIGADGANSR+AK+I+AGDY+YAIAFQ
Sbjct: 123 PSNDKDPYTLHYS--DHSQGQIKGEMKTLKVDLVIGADGANSRIAKAIDAGDYNYAIAFQ 180
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER+++P +KM YYE LAEMYVGDDVSPDFY WVFPK DHVAVGTGT+ ++ IK+ Q
Sbjct: 181 ERIRLPQDKMEYYEELAEMYVGDDVSPDFYAWVFPKYDHVAVGTGTMKVNQAKIKQLQAG 240
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA ++ GG+IIRVEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS
Sbjct: 241 IRQRAAKRLEGGEIIRVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSA 300
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+E S NG + E DL++YL+ WDKTY TY VLD+LQ+VFYRS+ REAFVE
Sbjct: 301 RMCAEVIVEASNNGQTVPTEKDLKRYLKIWDKTYGATYLVLDILQRVFYRSDATREAFVE 360
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MCAD VQ+MTFDSYLYK VVP NPL+ +K+ TIGSL+R NAL
Sbjct: 361 MCADIDVQEMTFDSYLYKTVVPANPLKQMKITAKTIGSLLRGNAL 405
>gi|304569546|ref|NP_441659.2| 43 kD bacteriochlorophyll synthase subunit [Synechocystis sp. PCC
6803]
gi|383322673|ref|YP_005383526.1| geranylgeranyl reductase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383325842|ref|YP_005386695.1| geranylgeranyl reductase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383491726|ref|YP_005409402.1| geranylgeranyl reductase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384436993|ref|YP_005651717.1| geranylgeranyl reductase [Synechocystis sp. PCC 6803]
gi|2493698|sp|Q55087.1|CHLP_SYNY3 RecName: Full=Geranylgeranyl diphosphate reductase; AltName:
Full=Geranylgeranyl reductase
gi|1332619|emb|CAA66615.1| geranylgeranyl hydrogenase [Synechocystis sp. PCC 6803]
gi|339274025|dbj|BAK50512.1| geranylgeranyl reductase [Synechocystis sp. PCC 6803]
gi|359271992|dbj|BAL29511.1| geranylgeranyl reductase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359275162|dbj|BAL32680.1| geranylgeranyl reductase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359278332|dbj|BAL35849.1| geranylgeranyl reductase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407961705|dbj|BAM54945.1| 43 kD bacteriochlorophyll synthase subunit [Synechocystis sp. PCC
6803]
Length = 407
Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust.
Identities = 275/404 (68%), Positives = 323/404 (79%), Gaps = 2/404 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+GGGPAG +AAE L K G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 3 LRVAVVGGGPAGSSAAEILVKAGIETYLFERKLDNAKPCGGAIPLCMVDEFDLPPEIIDR 62
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSN+ V+IGQTLK EYIGM RREVLD +LRERAEK G VING K+D+
Sbjct: 63 RVRKMKMISPSNIEVNIGQTLKDDEYIGMCRREVLDGFLRERAEKLGTKVINGTVYKLDI 122
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
P PY L+Y ++ G GE + L+VD VIGADGANSR+AK+I+AGDY+YAIAFQE
Sbjct: 123 PSKDSDPYTLHYADH-SVGGTTGEMKILKVDVVIGADGANSRIAKAIDAGDYNYAIAFQE 181
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLAT 289
R+++P++KM YY+ LAEMYVGDDVSPDFY WVFPK DHVAVGTGT+ +K IK Q
Sbjct: 182 RIRLPEDKMAYYDELAEMYVGDDVSPDFYAWVFPKYDHVAVGTGTMKVNKARIKDLQAGI 241
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R RA K+ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS R
Sbjct: 242 RTRAAKKLEGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSAR 301
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
MCAE I+ S NG R+ E DL++Y+++WDK Y TY VLD+LQ+VFYR++ REAFVEM
Sbjct: 302 MCAETIVATSNNGQRVPTEADLKQYIKQWDKRYGATYLVLDILQRVFYRTDATREAFVEM 361
Query: 410 CADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
C+D VQK+TFDSYLYK VVP NPL +K+ TIGSL+R NAL
Sbjct: 362 CSDIDVQKLTFDSYLYKTVVPANPLVQMKITAKTIGSLLRGNAL 405
>gi|452824971|gb|EME31970.1| geranylgeranyl reductase [Galdieria sulphuraria]
Length = 478
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 285/427 (66%), Positives = 339/427 (79%), Gaps = 1/427 (0%)
Query: 28 ALPRQQKFRVSAAKTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCK 87
+ P + RV K L LRVAV+GGGP G +AAE+LA+ G+ETF+ ERK DN K
Sbjct: 50 SCPSLSRTRVPNCKYFKTLLEAKLRVAVVGGGPGGSSAAESLARAGIETFIFERKFDNAK 109
Query: 88 PCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDA 147
PCGGAIPLCM+ EF LPLDI+DRKV +MKMISPSN VDIG+TLKPHEYIGM RREVLD+
Sbjct: 110 PCGGAIPLCMIEEFSLPLDIVDRKVRRMKMISPSNREVDIGKTLKPHEYIGMTRREVLDS 169
Query: 148 YLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGAD 207
+LRERA + GA I+GL + LP+ +PY++ Y+++ G+G+ TL+VD +IGAD
Sbjct: 170 FLRERAIQLGAQPIHGLVTDIILPKTDREPYIICYSDFSEKGNGIGKPNTLQVDMIIGAD 229
Query: 208 GANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCD 267
GANSRVAK I+AGDY+YAIAFQER+++P EKM YYE LAEMYVGDDVSPDFY WVFPK D
Sbjct: 230 GANSRVAKVIDAGDYNYAIAFQERIRLPPEKMAYYEELAEMYVGDDVSPDFYAWVFPKYD 289
Query: 268 HVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVG 327
HV VGTGTV + IKK+Q A R RA K+ GG II+VEAHPIPEHPRPRR+ GRVALVG
Sbjct: 290 HVGVGTGTVLDRPSIKKYQAAIRRRAASKLNGGHIIKVEAHPIPEHPRPRRVVGRVALVG 349
Query: 328 DAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRK-YLEKWDKTYWPTY 386
DAAGYVTKCSGEGIYFAAKSGRMCAEAI E S+ G R+ E +L+K YL++WD+ YW TY
Sbjct: 350 DAAGYVTKCSGEGIYFAAKSGRMCAEAIAEISQQGERIPSESELKKTYLKRWDQKYWSTY 409
Query: 387 KVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGS 446
KVLDVLQ VFYR+N AREAFVE+C DEYVQ+MTFDSYLYK V GNPL+D++L +T+G+
Sbjct: 410 KVLDVLQAVFYRNNIAREAFVELCEDEYVQQMTFDSYLYKTVAKGNPLQDVRLLFHTLGA 469
Query: 447 LVRANAL 453
RA AL
Sbjct: 470 FARAPAL 476
>gi|427715744|ref|YP_007063738.1| geranylgeranyl reductase [Calothrix sp. PCC 7507]
gi|427348180|gb|AFY30904.1| geranylgeranyl reductase [Calothrix sp. PCC 7507]
Length = 406
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 279/406 (68%), Positives = 324/406 (79%), Gaps = 5/406 (1%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAV+G GPAG +AAETLAK G+ET+LIERKLDN KPCGGAIPLCMV EFDLP +IID
Sbjct: 2 TLRVAVVGSGPAGSSAAETLAKAGIETYLIERKLDNAKPCGGAIPLCMVSEFDLPPEIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSN VDI + EYIGM RREVLD +LRERA K GA +IN K+D
Sbjct: 62 RRVRKMKMISPSNREVDI-NLINEDEYIGMCRREVLDGFLRERAAKLGAILINATVHKLD 120
Query: 170 LPRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
+P N PY ++Y D T+GG G +TL+VD VIGADGANSR+AK ++AGDY+YAIAF
Sbjct: 121 IPGNNTDPYTIHYV--DHTEGGAQGIAKTLKVDLVIGADGANSRIAKEMDAGDYNYAIAF 178
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQL 287
QER+++P++KM YY +LAEMYVGDDVS DFY WVFPK DHVAVGTGT+ HK IK+ Q
Sbjct: 179 QERIRLPEDKMAYYNDLAEMYVGDDVSTDFYAWVFPKYDHVAVGTGTMQVHKASIKQLQA 238
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
R RA +K+ GGKII+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFAAKS
Sbjct: 239 GIRARASEKLAGGKIIKVEAHPIPEHPRPRRVVGRIALVGDAAGYVTKSSGEGIYFAAKS 298
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GRMCAE I+E S NG+R+ E DL+ YL++WDK Y TYKVLD+LQ VFYRS+ REAFV
Sbjct: 299 GRMCAETIVEASNNGSRIPTENDLKVYLKRWDKKYGLTYKVLDILQSVFYRSDATREAFV 358
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EMC D VQK+TFDSYLYK VVP NP+ LK+ TIGSL+R NAL
Sbjct: 359 EMCGDLDVQKLTFDSYLYKTVVPANPITQLKITAKTIGSLIRGNAL 404
>gi|22297694|ref|NP_680941.1| geranylgeranyl hydrogenase [Thermosynechococcus elongatus BP-1]
gi|22293871|dbj|BAC07703.1| geranylgeranyl hydrogenase [Thermosynechococcus elongatus BP-1]
Length = 402
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 274/405 (67%), Positives = 326/405 (80%), Gaps = 7/405 (1%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
+LRVAV+GGGPAG +AAETLAK G++T+L ERKLDN KPCGGAIPLCMV EFDLP +IID
Sbjct: 2 SLRVAVVGGGPAGSSAAETLAKAGIQTYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSN+ V+IG TLK HEYIGM RREVLD+++R RA GA++ING K++
Sbjct: 62 RRVRKMKMISPSNIEVNIGHTLKEHEYIGMCRREVLDSFMRNRAADLGANLINGTVFKLE 121
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P ++PY L+Y + DGT +TLEVD VIGADGANSR+AK I+AGDY+YAIA+Q
Sbjct: 122 QPTTSDRPYTLHYVQEDGTA------QTLEVDVVIGADGANSRIAKEIDAGDYNYAIAYQ 175
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER+++P++KM YY LAEMYVGDDVSPDFY WVFPK DHVAVGTGT+ +K I++ Q
Sbjct: 176 ERIRLPEDKMAYYNELAEMYVGDDVSPDFYAWVFPKYDHVAVGTGTMKVNKDRIRELQAG 235
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R+RA K+ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS
Sbjct: 236 IRSRAAAKLEGGQIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSA 295
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+E S G R+ E DL+ YL++WDK Y TY VLD+LQ+VFYRS+ REAFVE
Sbjct: 296 RMCAETIVETSNGGRRIPTEADLKLYLKRWDKAYGMTYLVLDLLQRVFYRSDATREAFVE 355
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MC+D VQK+TFDSYLYK VVP NPL LK+ TIGSL+R NAL
Sbjct: 356 MCSDLDVQKLTFDSYLYKTVVPANPLVQLKITAKTIGSLMRGNAL 400
>gi|354567402|ref|ZP_08986571.1| geranylgeranyl reductase [Fischerella sp. JSC-11]
gi|353542674|gb|EHC12135.1| geranylgeranyl reductase [Fischerella sp. JSC-11]
Length = 418
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 279/406 (68%), Positives = 323/406 (79%), Gaps = 5/406 (1%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP DIID
Sbjct: 14 TLRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPQDIID 73
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSN VDI +K EYIGM RREVLD YLR RA K GA++IN K+D
Sbjct: 74 RQVRKMKMISPSNREVDI-NLVKQEEYIGMCRREVLDGYLRNRAAKLGANLINATVHKLD 132
Query: 170 LPRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
+PRN PY ++Y D T+GG G +TL+VD +IGADGANSR+AK I+AGDY+YAIAF
Sbjct: 133 IPRNNTDPYTIHYV--DHTEGGAQGIAKTLKVDLIIGADGANSRIAKEIDAGDYNYAIAF 190
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQL 287
QER+++P E+M YY +LAEMYVGDDVS DFY WVFPK DHVAVGTGT+ +K IK+ Q
Sbjct: 191 QERIRLPQEQMAYYNDLAEMYVGDDVSTDFYAWVFPKYDHVAVGTGTMHVNKASIKQLQA 250
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
R RA K++GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAGYVTK SGEGIYFAAKS
Sbjct: 251 GIRARAARKLVGGQIIKVEAHPIPEHPRPRRVVGRVALVGDAAGYVTKSSGEGIYFAAKS 310
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GRMCAE I+E S G R+ E DL+ YL++WDK Y TYKVLD+LQ VFYRS+ REAFV
Sbjct: 311 GRMCAETIVEVSNGGIRIPTEADLKVYLKRWDKKYGLTYKVLDLLQTVFYRSDATREAFV 370
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EMCAD VQ++TFDSYLYK VVP NP+ LK+ TIGSL+R NAL
Sbjct: 371 EMCADLDVQRLTFDSYLYKTVVPANPITQLKITAKTIGSLIRGNAL 416
>gi|428320472|ref|YP_007118354.1| geranylgeranyl reductase [Oscillatoria nigro-viridis PCC 7112]
gi|428244152|gb|AFZ09938.1| geranylgeranyl reductase [Oscillatoria nigro-viridis PCC 7112]
Length = 424
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 275/406 (67%), Positives = 327/406 (80%), Gaps = 5/406 (1%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAV+G GPAG +AAETL K G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IID
Sbjct: 20 TLRVAVVGSGPAGSSAAETLVKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPQNIID 79
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSNV VDI HEYIGM RREVLD +LR+RA GA +ING K++
Sbjct: 80 RQVRKMKMISPSNVEVDI-NIENAHEYIGMCRREVLDGFLRDRAASLGAKLINGTVHKLE 138
Query: 170 LPRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
+P N PY+L+Y ++ DG+ G+ ++TL+VD VIGADGANSRVAK+I+AGDY+YAIAF
Sbjct: 139 IPANNTDPYILHYADHSDGSAMGI--QKTLKVDLVIGADGANSRVAKAIDAGDYNYAIAF 196
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQL 287
QER+++P++KM YYE+LAEMYVGDDVS DFY WVFPK DHVAVGTGT+ ++ IKK Q
Sbjct: 197 QERIRLPEDKMAYYEDLAEMYVGDDVSTDFYAWVFPKYDHVAVGTGTMKVNQASIKKLQA 256
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
R RA K++GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAGYVTK SGEGIYFAAKS
Sbjct: 257 GVRARAAKKLMGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGYVTKSSGEGIYFAAKS 316
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GRMCAE I+E S G R+ E +++ YL++WDK Y TYKVLD+LQ+VFYRS+ REAFV
Sbjct: 317 GRMCAETIVEISNKGARIPTEEEIKIYLKRWDKAYGITYKVLDILQRVFYRSDATREAFV 376
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EMCAD VQK+TFDSYLYK VVP NP +K+ TIGSL+R NAL
Sbjct: 377 EMCADRDVQKLTFDSYLYKTVVPANPFIQMKITAKTIGSLLRGNAL 422
>gi|428312978|ref|YP_007123955.1| geranylgeranyl reductase [Microcoleus sp. PCC 7113]
gi|428254590|gb|AFZ20549.1| geranylgeranyl reductase [Microcoleus sp. PCC 7113]
Length = 426
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 278/405 (68%), Positives = 325/405 (80%), Gaps = 5/405 (1%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 23 LRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIIDR 82
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSNV VDI K HEYIGM RREVLD ++R RA K GA +ING K+D+
Sbjct: 83 RVRKMKMISPSNVEVDI-NIEKEHEYIGMCRREVLDGFMRNRAAKLGAKLINGTVHKLDI 141
Query: 171 PRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P N PY ++Y ++ DG+ G +TL+VD VIGADGANSRVAK+I+AGDY+YAIAFQ
Sbjct: 142 PTNNTDPYTIHYADHSDGSLEGTA--KTLKVDLVIGADGANSRVAKAIDAGDYNYAIAFQ 199
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER+++P++KM YYE+LAEMYVG+DVS DFY WVFPK DHVAVGTGT+ +K DIKK Q
Sbjct: 200 ERIRLPEDKMAYYEDLAEMYVGNDVSTDFYAWVFPKYDHVAVGTGTMKVNKADIKKLQAG 259
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA ++ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS
Sbjct: 260 IRARAAKRLAGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSA 319
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+E S GTR+ E DL+ YL++WDK Y TYKVLD+LQ VFYRS+ REAFVE
Sbjct: 320 RMCAETIVETSNGGTRIPTEADLKLYLKRWDKKYGMTYKVLDILQTVFYRSDATREAFVE 379
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MCAD+ VQK+TFDSYLYK VVP NP +K+ TIGSL+R NAL
Sbjct: 380 MCADKDVQKLTFDSYLYKTVVPANPFVQMKITAKTIGSLLRGNAL 424
>gi|254421839|ref|ZP_05035557.1| geranylgeranyl reductase [Synechococcus sp. PCC 7335]
gi|196189328|gb|EDX84292.1| geranylgeranyl reductase [Synechococcus sp. PCC 7335]
Length = 407
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 275/405 (67%), Positives = 331/405 (81%), Gaps = 4/405 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+GGGPAG +AAETL K G+ETFL ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 3 LRVAVVGGGPAGSSAAETLVKAGIETFLFERKLDNAKPCGGAIPLCMVDEFDLPPEIIDR 62
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSNV V+IG+TL EYIGM RRE+LD +LR+RAE+ G VING K+++
Sbjct: 63 RVRKMKMISPSNVEVNIGETLHNDEYIGMCRREILDGFLRDRAERLGTKVINGTVHKLEI 122
Query: 171 PRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P N + PYVL+Y D + GG+ GE +TL+VD VIGADGANSRVA++I+AGDY+YAIAFQ
Sbjct: 123 PGNDKDPYVLHYA--DHSHGGLQGEAKTLKVDMVIGADGANSRVARAIDAGDYNYAIAFQ 180
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT-HKGDIKKFQLA 288
ER+++P++KM YYE LAEMYVGDDVSPDFY WVFPK DHVAVGTGT+ ++ IK+ Q
Sbjct: 181 ERIRLPEDKMAYYEELAEMYVGDDVSPDFYAWVFPKYDHVAVGTGTMRPNQARIKELQRG 240
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA ++ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS
Sbjct: 241 IRQRAAKRLEGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSA 300
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+E S +G R + E +L+ Y+++WDK Y TYKVLD+LQ+VFYRS+ +REAFVE
Sbjct: 301 RMCAETIVEFSNSGERALTEDELKLYIKRWDKEYGLTYKVLDILQRVFYRSDASREAFVE 360
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MC+D VQK+TFDSYLYK VVP NPL +K+ T+GSL+R AL
Sbjct: 361 MCSDIDVQKLTFDSYLYKTVVPANPLTQMKITAKTVGSLLRGYAL 405
>gi|434389267|ref|YP_007099878.1| geranylgeranyl reductase [Chamaesiphon minutus PCC 6605]
gi|428020257|gb|AFY96351.1| geranylgeranyl reductase [Chamaesiphon minutus PCC 6605]
Length = 408
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 275/406 (67%), Positives = 325/406 (80%), Gaps = 5/406 (1%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG AAE LAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 3 LRVAVVGSGPAGSCAAEVLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIIDR 62
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V +MKMISPSN+ VDIGQTLK EYIGM RREVLD +LR+RA K GA +ING K+++
Sbjct: 63 QVRQMKMISPSNIEVDIGQTLKAGEYIGMCRREVLDGFLRDRAAKLGAKLINGTVHKLEM 122
Query: 171 P-RNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
P N PYV++Y D + G + GE +TL+VD VIGADGANSRVAK+++AGDY+YAIAF
Sbjct: 123 PGLNTTDPYVIHYA--DHSNGSLEGEAKTLKVDLVIGADGANSRVAKAMDAGDYNYAIAF 180
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQL 287
QER+++P++KM YY +LAEMYVGDDVS DFY WVFPK DHVAVGTGT+ HK IK+ Q
Sbjct: 181 QERIRLPEDKMAYYHSLAEMYVGDDVSTDFYAWVFPKYDHVAVGTGTMKVHKASIKQLQA 240
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
R RA K+ GG II+VEAHPIPEHPRPRR+ GR LVGDAAGYVTK SGEGIYFAAKS
Sbjct: 241 GIRKRAAKKLEGGTIIKVEAHPIPEHPRPRRVVGRCTLVGDAAGYVTKSSGEGIYFAAKS 300
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GRMCAE I+E SE G ++ E DL+ Y+++WDK Y TY VLD+LQ+VFYRS+ REAFV
Sbjct: 301 GRMCAEVIVERSERGAKIPTEADLKAYIKQWDKAYGLTYTVLDILQRVFYRSDATREAFV 360
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EMC+D VQK+TFDSYLYK VVP NP+ +K+ TIGSL+R NAL
Sbjct: 361 EMCSDLDVQKLTFDSYLYKTVVPANPITQMKITAKTIGSLLRGNAL 406
>gi|300864352|ref|ZP_07109226.1| geranylgeranyl reductase [Oscillatoria sp. PCC 6506]
gi|300337661|emb|CBN54372.1| geranylgeranyl reductase [Oscillatoria sp. PCC 6506]
Length = 406
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 278/406 (68%), Positives = 325/406 (80%), Gaps = 5/406 (1%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAV+G GPAG AAETL K G+ET+LIERKLDN KPCGGAIPLCMV EFDLP +IID
Sbjct: 2 TLRVAVVGSGPAGSCAAETLVKAGIETYLIERKLDNAKPCGGAIPLCMVSEFDLPQEIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSN+ VDI KP EYIGM RREVLD++LR RA GA +ING K+D
Sbjct: 62 RQVRKMKMISPSNIEVDI-NIEKPDEYIGMCRREVLDSFLRNRAASLGAKLINGTVHKLD 120
Query: 170 LPRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
+P N Y ++Y ++ DG VG + L+VD VIGADGANSRVAK+I+AGDY+YAIAF
Sbjct: 121 IPTNGTDAYTIHYADHSDGN--AVGTIKNLKVDLVIGADGANSRVAKAIDAGDYNYAIAF 178
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQL 287
QER+++P++KM YY++LAEMYVGDDVS DFY WVFPK DHVAVGTGT+ ++ DIKK Q
Sbjct: 179 QERIRLPEDKMDYYQDLAEMYVGDDVSTDFYAWVFPKYDHVAVGTGTMKVNQADIKKLQA 238
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
R RA K+ GGKII+VEAHPIPEHPRPRR+ GRVALVGDAAGYVTK SGEGIYFAAKS
Sbjct: 239 GIRARAAKKLAGGKIIKVEAHPIPEHPRPRRVVGRVALVGDAAGYVTKSSGEGIYFAAKS 298
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GRMCAE I+E S NGTR+ E +L+ YL++WDK Y TYKVLD+LQ+VFYRS+ REAFV
Sbjct: 299 GRMCAETIVEISANGTRIPTEEELKLYLKRWDKKYGITYKVLDILQRVFYRSDATREAFV 358
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EMCAD VQ++TFDSYLYK VVP NP +K+ TIGSL+R NAL
Sbjct: 359 EMCADRDVQRLTFDSYLYKTVVPANPFVQMKITAKTIGSLLRGNAL 404
>gi|75907719|ref|YP_322015.1| geranylgeranyl reductase [Anabaena variabilis ATCC 29413]
gi|75701444|gb|ABA21120.1| Geranylgeranyl reductase [Anabaena variabilis ATCC 29413]
Length = 418
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 273/405 (67%), Positives = 325/405 (80%), Gaps = 3/405 (0%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IID
Sbjct: 14 TLRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIID 73
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSN VDI +K EYIGM RREVLD +LR RA K GA++IN K+D
Sbjct: 74 RQVRKMKMISPSNREVDI-NLIKEDEYIGMCRREVLDGFLRNRAAKLGANLINATVHKVD 132
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
+P N PY ++Y +++ G G +TL+VD +IGADGANSR+AK ++AGDY+YAIAFQ
Sbjct: 133 IPGNNSDPYTIHYVDHN-EGGAQGVTKTLKVDLIIGADGANSRIAKEMDAGDYNYAIAFQ 191
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER+++P++KM YY +LAEMYVG+DVS DFY WVFPK DHVAVGTGT+ HK IK+ Q
Sbjct: 192 ERIRLPEDKMAYYNDLAEMYVGNDVSTDFYAWVFPKYDHVAVGTGTMQVHKASIKQLQAG 251
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA +K+ GGKII+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFAAKSG
Sbjct: 252 IRARASEKLAGGKIIKVEAHPIPEHPRPRRVVGRIALVGDAAGYVTKSSGEGIYFAAKSG 311
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+E S+NG+R+ E +L+ YL++WDK Y TYKVLD+LQ VFYRS+ REAFVE
Sbjct: 312 RMCAETIVEVSQNGSRIPTENELKIYLKRWDKKYGLTYKVLDILQTVFYRSDATREAFVE 371
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MCAD VQK+TFDSYLYK VVP NP+ LK+ TIGSL+R NAL
Sbjct: 372 MCADLDVQKLTFDSYLYKTVVPANPITQLKITAKTIGSLIRGNAL 416
>gi|428223506|ref|YP_007107603.1| geranylgeranyl reductase [Geitlerinema sp. PCC 7407]
gi|427983407|gb|AFY64551.1| geranylgeranyl reductase [Geitlerinema sp. PCC 7407]
Length = 406
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 278/405 (68%), Positives = 324/405 (80%), Gaps = 5/405 (1%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 3 LRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIIDR 62
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V +MKMISPSNV VDI EYIGM RREVLD +LR+RA K GA +ING K+DL
Sbjct: 63 RVRRMKMISPSNVEVDINLD-NQDEYIGMCRREVLDGFLRDRAAKLGAKLINGTVHKLDL 121
Query: 171 PRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P N PY L+Y ++ DG+ G +TL+VD VIGADGANSRVAK+++AGDY+YAIAFQ
Sbjct: 122 PTNSTDPYTLHYADHSDGSIEGTA--KTLQVDLVIGADGANSRVAKAMDAGDYNYAIAFQ 179
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER+++P++KM YY++LAEMYVG+DVSPDFY WVFPK DHVAVGTGT+ +K IK Q
Sbjct: 180 ERIRLPEDKMAYYQDLAEMYVGNDVSPDFYAWVFPKYDHVAVGTGTMKVNKAMIKSLQAG 239
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA ++ GGKII+VEAHPIPEHPRPRR+ GR ALVGDAAGYVTK SGEGIYFAAKSG
Sbjct: 240 IRARAAKRLEGGKIIKVEAHPIPEHPRPRRVVGRAALVGDAAGYVTKSSGEGIYFAAKSG 299
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+E S NG R+ E DL+ YL++WDK Y TYKVLD+LQ VFYRS+ REAFVE
Sbjct: 300 RMCAETIVEVSNNGARIPTEADLKLYLQRWDKKYGLTYKVLDLLQNVFYRSDATREAFVE 359
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MCAD VQ++TFDSYLYK VVP NPL LK+ TIGSL+R NAL
Sbjct: 360 MCADRDVQRLTFDSYLYKTVVPANPLVQLKITAKTIGSLLRGNAL 404
>gi|434397929|ref|YP_007131933.1| geranylgeranyl reductase [Stanieria cyanosphaera PCC 7437]
gi|428269026|gb|AFZ34967.1| geranylgeranyl reductase [Stanieria cyanosphaera PCC 7437]
Length = 407
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 273/406 (67%), Positives = 328/406 (80%), Gaps = 4/406 (0%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAV+G GPAG +AAE LAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IID
Sbjct: 2 TLRVAVVGSGPAGSSAAEILAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSN+ V+IGQTLK EYIGM RREVLD ++R+RA K GA++ING ++D
Sbjct: 62 RRVRKMKMISPSNIEVNIGQTLKDDEYIGMCRREVLDGFMRDRAAKLGANLINGTVYQLD 121
Query: 170 LPRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
+P N + PY ++Y ++ +G GV +TL+ D VIGADGANSR+AK+I+AGDY+YAIAF
Sbjct: 122 IPNNDKDPYTIHYADHSNGDAKGV--MKTLKADLVIGADGANSRIAKAIDAGDYNYAIAF 179
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQL 287
QER+++P++KM YYE+LAEMYVGDDVSPDFY WVFPK DHVAVGTGT+ +K IK Q
Sbjct: 180 QERIRLPEDKMAYYEDLAEMYVGDDVSPDFYAWVFPKYDHVAVGTGTMKVNKAIIKDLQA 239
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
R RA K+ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS
Sbjct: 240 GIRTRAARKLEGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKS 299
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
RMCAE I+E S G R+ E DL+ YL++WDK Y TY VLD+LQ+VFYR++ REAFV
Sbjct: 300 ARMCAEVIVEASNQGQRIPTEADLKVYLKRWDKKYGMTYLVLDILQRVFYRTDATREAFV 359
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EMCAD VQK+TFDSYLYK VVP NPL+ +K+ T+GSL+R NAL
Sbjct: 360 EMCADVDVQKLTFDSYLYKTVVPANPLKQMKITAKTLGSLLRGNAL 405
>gi|440684152|ref|YP_007158947.1| geranylgeranyl reductase [Anabaena cylindrica PCC 7122]
gi|428681271|gb|AFZ60037.1| geranylgeranyl reductase [Anabaena cylindrica PCC 7122]
Length = 406
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 274/405 (67%), Positives = 323/405 (79%), Gaps = 3/405 (0%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAV+G GPAG +AAETLAK G+ET+LIERKLDN KPCGGAIPLCMV EFDLP +IID
Sbjct: 2 TLRVAVVGSGPAGSSAAETLAKAGIETYLIERKLDNAKPCGGAIPLCMVSEFDLPPEIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSN VDI + EYIGM RREVLD +LR+RA K GA +IN K+D
Sbjct: 62 RRVRKMKMISPSNREVDI-NLINEDEYIGMCRREVLDGFLRDRAAKLGAILINATVHKLD 120
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
+P N PY ++Y ++ T G G +TL+VD VIGADGANSR+AK ++AGDY+YAIAFQ
Sbjct: 121 IPTNNTDPYTIHYVDHTET-GTQGIAKTLKVDLVIGADGANSRIAKEMDAGDYNYAIAFQ 179
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER+++P +KM YY +LAEMYVGDDVS DFY WVFPK DHVAVGTGT+ +K IK+FQ
Sbjct: 180 ERIRLPQDKMAYYNDLAEMYVGDDVSTDFYAWVFPKYDHVAVGTGTMHVNKAKIKQFQAG 239
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA +K+ GG+II++EAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFAAKSG
Sbjct: 240 IRARASEKLAGGEIIKIEAHPIPEHPRPRRVVGRIALVGDAAGYVTKSSGEGIYFAAKSG 299
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAEAI+E + G R+ EGDL+ YL++WDK Y TYKVLD+LQ VFYRS+ REAFVE
Sbjct: 300 RMCAEAIVEAANGGARIPTEGDLKVYLKRWDKKYGLTYKVLDILQSVFYRSDATREAFVE 359
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MC D VQK+TFDSYLYK VVP NP+ LK+ TIGSL+R NAL
Sbjct: 360 MCGDMDVQKLTFDSYLYKTVVPANPITQLKITAKTIGSLIRGNAL 404
>gi|334118471|ref|ZP_08492560.1| geranylgeranyl reductase [Microcoleus vaginatus FGP-2]
gi|333459478|gb|EGK88091.1| geranylgeranyl reductase [Microcoleus vaginatus FGP-2]
Length = 424
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 274/406 (67%), Positives = 325/406 (80%), Gaps = 5/406 (1%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAV+G GPAG +AAETL K G+ET+L ERKLDN KPCGGAIPLCMV EFDLP IID
Sbjct: 20 TLRVAVVGSGPAGSSAAETLVKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPQSIID 79
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSNV VDI HEYIGM RREVLD ++R+RA GA +ING K++
Sbjct: 80 RQVRKMKMISPSNVEVDI-NIENAHEYIGMCRREVLDGFMRDRAASLGAKLINGTVHKLE 138
Query: 170 LPRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
+P N PY L+Y ++ DG+ G+ ++TL+VD VIGADGANSRVAK+I+AGDY+YAIAF
Sbjct: 139 IPGNNTDPYTLHYADHSDGSAMGI--QKTLKVDLVIGADGANSRVAKAIDAGDYNYAIAF 196
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQL 287
QER+++P++KM YYE+LAEMYVGDDVS DFY WVFPK DHVAVGTGT+ ++ IKK Q
Sbjct: 197 QERIRLPEDKMAYYEDLAEMYVGDDVSTDFYAWVFPKYDHVAVGTGTMKVNQASIKKLQA 256
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
R RA K++GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAGYVTK SGEGIYFAAKS
Sbjct: 257 GVRARAAKKLMGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGYVTKSSGEGIYFAAKS 316
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GRMCAE I+E S G R+ E +++ YL++WDK Y TYKVLD+LQ+VFYRS+ REAFV
Sbjct: 317 GRMCAETIVEISNKGARIPTEEEIKIYLKRWDKAYGITYKVLDILQRVFYRSDATREAFV 376
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EMCAD VQK+TFDSYLYK VVP NP +K+ TIGSL+R NAL
Sbjct: 377 EMCADRDVQKLTFDSYLYKTVVPANPFVQMKITAKTIGSLLRGNAL 422
>gi|443327998|ref|ZP_21056603.1| geranylgeranyl reductase [Xenococcus sp. PCC 7305]
gi|442792407|gb|ELS01889.1| geranylgeranyl reductase [Xenococcus sp. PCC 7305]
Length = 407
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 274/405 (67%), Positives = 325/405 (80%), Gaps = 4/405 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
+RVAV+G GPAG +AAE LAK G+ETFL ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 3 IRVAVVGSGPAGSSAAEILAKAGIETFLFERKLDNAKPCGGAIPLCMVDEFDLPPEIIDR 62
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSNV V+IG TLK EYIGM RREVLD +LR+RA K GA++ING ++D+
Sbjct: 63 QVRKMKMISPSNVEVNIGHTLKDGEYIGMCRREVLDGFLRDRAAKLGANLINGTVYQLDV 122
Query: 171 PRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P N + PY L+Y ++ +G+ GV +TL+ D VIGADGANSR+AK+I+AGDY+YAIAFQ
Sbjct: 123 PTNDKDPYTLHYADHSNGSSKGV--MKTLKADVVIGADGANSRIAKAIDAGDYNYAIAFQ 180
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER+++P++KM YYE+LAEMYVG+DVS DFY WVFPK DHVAVGTGT+ HK IK Q
Sbjct: 181 ERIRLPEDKMAYYEDLAEMYVGNDVSTDFYAWVFPKFDHVAVGTGTMKVHKATIKDLQAG 240
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA K+ GG+II+VEAHPIPEHPRPR + GRV LVGDA G VTK SGEGIYFAAKS
Sbjct: 241 IRARAARKLEGGEIIKVEAHPIPEHPRPRPIRGRVVLVGDALGTVTKSSGEGIYFAAKSA 300
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+E S+NG ++ E DL+ +L+KW+K Y TY VLD+LQKVFYRS+ REAFVE
Sbjct: 301 RMCAETIVEASQNGAKLPTEADLKGFLKKWNKQYGATYLVLDILQKVFYRSDATREAFVE 360
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MCAD VQKMTFDSYLYK VVP NPL +K+ TIGSL+R NAL
Sbjct: 361 MCADVDVQKMTFDSYLYKTVVPANPLTQMKITAKTIGSLIRGNAL 405
>gi|427706768|ref|YP_007049145.1| geranylgeranyl reductase [Nostoc sp. PCC 7107]
gi|427359273|gb|AFY41995.1| geranylgeranyl reductase [Nostoc sp. PCC 7107]
Length = 406
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 274/406 (67%), Positives = 327/406 (80%), Gaps = 5/406 (1%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAV+G GPAG +AAETLA +G+ET+L ERKLDN KPCGGAIPLCMVGEFDLP +IID
Sbjct: 2 TLRVAVVGSGPAGSSAAETLAASGIETYLFERKLDNAKPCGGAIPLCMVGEFDLPPEIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSN VDI + EYIGM RREVLD++LR RA K GA++IN K+D
Sbjct: 62 RRVRKMKMISPSNREVDI-NLVNEEEYIGMCRREVLDSFLRNRAAKLGANLINATVHKVD 120
Query: 170 LPRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
+P N PY ++Y ++ DG+ GVG +TL+VD +IGADGANSR+AK ++AGDY+YAIAF
Sbjct: 121 IPTNNTDPYTIHYVDHADGSVQGVG--KTLKVDLIIGADGANSRIAKEMDAGDYNYAIAF 178
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQL 287
QER+++P++KM +Y +LAEMYVGDDVS DFY WVFPK DHVAVGTGT+ +K IK+ Q
Sbjct: 179 QERIRLPEDKMAFYNDLAEMYVGDDVSTDFYAWVFPKYDHVAVGTGTMHVNKASIKQLQA 238
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
R RA K+ GGKII+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFAAKS
Sbjct: 239 GIRARAAKKLEGGKIIKVEAHPIPEHPRPRRVVGRIALVGDAAGYVTKSSGEGIYFAAKS 298
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GRMCAEAI+E S NG+R+ E DL+ Y+++WDK Y TYKVLD+LQ VFYRS+ REAFV
Sbjct: 299 GRMCAEAIVETSNNGSRIPTENDLKIYIKRWDKKYGLTYKVLDILQSVFYRSDATREAFV 358
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EMC D VQK+TFDSYLYK VVP NP+ LK+ TIGSL+R NAL
Sbjct: 359 EMCGDMDVQKLTFDSYLYKTVVPANPITQLKITAKTIGSLIRGNAL 404
>gi|443315738|ref|ZP_21045214.1| geranylgeranyl reductase [Leptolyngbya sp. PCC 6406]
gi|442784654|gb|ELR94518.1| geranylgeranyl reductase [Leptolyngbya sp. PCC 6406]
Length = 411
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 273/405 (67%), Positives = 326/405 (80%), Gaps = 2/405 (0%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
+LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IID
Sbjct: 2 SLRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVEEFDLPPEIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSN+ V+IG TLK EYIGM RREVLD +LR+RA GA +ING ++
Sbjct: 62 RQVRKMKMISPSNIEVNIGSTLKDGEYIGMCRREVLDGFLRDRAAMLGAKLINGTVHTLE 121
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
LP+ PY L+Y ++ +G VG ++L+VD VIGADGANSRVAK+I AGDY+YAIAFQ
Sbjct: 122 LPQTESDPYTLHYADHS-EEGLVGNHKSLQVDLVIGADGANSRVAKAIKAGDYNYAIAFQ 180
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER+++P +KM YYE+LAEMYVGDDVSPDFY WVFPK DHVAVGTGT+ ++ IK+ Q
Sbjct: 181 ERIRLPADKMTYYEDLAEMYVGDDVSPDFYAWVFPKYDHVAVGTGTMRVNQAKIKQLQAG 240
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA ++ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS
Sbjct: 241 IRARAAKRLEGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSA 300
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAEAI+E S+ G R+ E DL+ YL++WDK Y TY VLD+LQ+VFYR++ REAFVE
Sbjct: 301 RMCAEAIVEFSQGGQRIPTEADLKVYLKRWDKQYGTTYLVLDLLQRVFYRTDATREAFVE 360
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MCAD VQK+TFDSYLYK VVP NPL +K+ T+GSL+R NAL
Sbjct: 361 MCADMDVQKLTFDSYLYKTVVPANPLVQMKITAKTLGSLLRGNAL 405
>gi|17227624|ref|NP_484172.1| geranylgeranyl hydrogenase [Nostoc sp. PCC 7120]
gi|17135106|dbj|BAB77652.1| geranylgeranyl hydrogenase [Nostoc sp. PCC 7120]
Length = 406
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 272/405 (67%), Positives = 324/405 (80%), Gaps = 3/405 (0%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IID
Sbjct: 2 TLRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSN VDI +K EYIGM RREVLD +LR RA K GA++IN K+D
Sbjct: 62 RQVRKMKMISPSNREVDI-NLIKEDEYIGMCRREVLDGFLRNRAAKLGANLINATVHKVD 120
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
+P N PY ++Y +++ G G +TL+VD +IGADGANSR+AK ++AGDY+YAIAFQ
Sbjct: 121 IPGNNSDPYTIHYVDHN-EGGAQGVTKTLKVDLIIGADGANSRIAKEMDAGDYNYAIAFQ 179
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER+++P++KM YY +LAEMYVG+DVS DFY WVFPK DHVAVGTGT+ HK IK+ Q
Sbjct: 180 ERIRLPEDKMAYYNDLAEMYVGNDVSTDFYAWVFPKYDHVAVGTGTMQVHKASIKQLQAG 239
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA +K+ GGKII+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFAAKSG
Sbjct: 240 IRTRASEKLAGGKIIKVEAHPIPEHPRPRRVVGRIALVGDAAGYVTKSSGEGIYFAAKSG 299
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+E S+NG+R+ E +L+ YL++WDK Y TYKVLD+LQ VFYRS+ REAFVE
Sbjct: 300 RMCAETIVEVSQNGSRIPTENELKIYLKRWDKKYGLTYKVLDILQTVFYRSDATREAFVE 359
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MC D VQK+TFDSYLYK VVP NP+ LK+ TIGSL+R NAL
Sbjct: 360 MCGDLDVQKLTFDSYLYKTVVPANPITQLKITAKTIGSLIRGNAL 404
>gi|427712839|ref|YP_007061463.1| geranylgeranyl reductase [Synechococcus sp. PCC 6312]
gi|427376968|gb|AFY60920.1| geranylgeranyl reductase [Synechococcus sp. PCC 6312]
Length = 407
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 277/405 (68%), Positives = 323/405 (79%), Gaps = 4/405 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAETLA+ G+ET+L ERKLDN KPCGGAIPLCMV EFDLP IIDR
Sbjct: 3 LRVAVVGSGPAGSSAAETLARAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPHIIDR 62
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSN+ V+IG TLK EYIGM RREVLD +LRERA GA++ING K+D+
Sbjct: 63 QVRKMKMISPSNIEVNIGHTLKADEYIGMCRREVLDGFLRERAAGFGANLINGTVFKLDI 122
Query: 171 PRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P N +PY L+Y D + GG G +TLEVD VIGADGANSR+AK I+AGDY+YAIAFQ
Sbjct: 123 PENNSKPYTLHYA--DLSNGGPEGIAKTLEVDVVIGADGANSRIAKEIDAGDYNYAIAFQ 180
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER+++P +KM YY +LAEMYVGDDVSPDFY WVFPK DHVAVGTGT+ +K I++ Q
Sbjct: 181 ERIRLPADKMAYYNDLAEMYVGDDVSPDFYAWVFPKYDHVAVGTGTMKINKEKIRQLQAG 240
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA K+ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS
Sbjct: 241 IRTRAAAKLEGGQIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSA 300
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+E S NG R+ E DL+ YL++WD+ Y TY VLD+LQ+VFYRS+ REAFVE
Sbjct: 301 RMCAETIVEFSNNGQRIPTEADLKVYLKRWDQRYGMTYLVLDLLQRVFYRSDATREAFVE 360
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MC D VQ++TFDSYLYK VVP NPL LK+ TIGSL+R NAL
Sbjct: 361 MCEDIDVQRLTFDSYLYKTVVPANPLVQLKITAKTIGSLLRGNAL 405
>gi|434404525|ref|YP_007147410.1| geranylgeranyl reductase [Cylindrospermum stagnale PCC 7417]
gi|428258780|gb|AFZ24730.1| geranylgeranyl reductase [Cylindrospermum stagnale PCC 7417]
Length = 418
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 273/405 (67%), Positives = 322/405 (79%), Gaps = 3/405 (0%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAV+G GPAG +AAETLAK G+ET+LIERKLDN KPCGGAIPLCMV EFDLP +IID
Sbjct: 14 TLRVAVVGSGPAGSSAAETLAKAGIETYLIERKLDNAKPCGGAIPLCMVSEFDLPPEIID 73
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSN VDI + EYIGM RREVLD +LR+RA K GA +IN K+D
Sbjct: 74 RRVRKMKMISPSNREVDI-NLINQDEYIGMCRREVLDGFLRDRAAKLGAILINATVHKLD 132
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
+P N PY ++Y ++ + G G +TL+VD VIGADGANSR+AK ++AGDY+YAIAFQ
Sbjct: 133 IPTNNTDPYTIHYVDHTES-GAQGIAKTLKVDLVIGADGANSRIAKEMDAGDYNYAIAFQ 191
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER+++P +KM YY +LAEMYVGDDVS DFY WVFPK DHVAVGTGT+ +K IK+ Q
Sbjct: 192 ERIRLPQDKMDYYNDLAEMYVGDDVSTDFYAWVFPKYDHVAVGTGTMHVNKASIKQLQAG 251
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA +K+ GG+II+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFAAKSG
Sbjct: 252 IRARASEKLAGGQIIKVEAHPIPEHPRPRRVVGRIALVGDAAGYVTKSSGEGIYFAAKSG 311
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+E S +G R+ EGDL+ YL++WDK Y TYKVLD+LQ VFYRS+ REAFVE
Sbjct: 312 RMCAETIVEASNSGARIPSEGDLKIYLKRWDKKYGLTYKVLDILQSVFYRSDATREAFVE 371
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MC D VQK+TFDSYLYK VVP NP+ LK+ TIGSL+R NAL
Sbjct: 372 MCGDMDVQKLTFDSYLYKTVVPANPITQLKITAKTIGSLIRGNAL 416
>gi|297733970|emb|CBI15217.3| unnamed protein product [Vitis vinifera]
Length = 351
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 299/464 (64%), Positives = 322/464 (69%), Gaps = 115/464 (24%)
Query: 1 MASMALKSFTGLRQSPQEQQHPH--FIAQALPRQQKFRVSAAKTSPKLTNRNLRVAVIGG 58
MAS++LK+F GLRQS + + F + LP Q +R LR+
Sbjct: 1 MASISLKTFVGLRQSSSDTYNSGHVFPVKHLPAQP-------------ASRGLRIVAGKF 47
Query: 59 GPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMI 118
P +FDLPLDIIDR+
Sbjct: 48 SP---------------------------------------KFDLPLDIIDRR------- 61
Query: 119 SPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPY 178
PHEYIGMVRREVLD+YLRERA +GA+V
Sbjct: 62 --------------PHEYIGMVRREVLDSYLRERASASGATV------------------ 89
Query: 179 VLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEK 238
DAVIGADGANSRVAK I AGDYDYAIAFQER+KIPD+K
Sbjct: 90 ----------------------DAVIGADGANSRVAKFIGAGDYDYAIAFQERIKIPDDK 127
Query: 239 MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKIL 298
MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHK DIKKFQLATR RAK+KIL
Sbjct: 128 MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKSDIKKFQLATRLRAKEKIL 187
Query: 299 GGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEG 358
GGKIIRVEAHPIPEHPRPRRL+GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+EG
Sbjct: 188 GGKIIRVEAHPIPEHPRPRRLAGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEG 247
Query: 359 SENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKM 418
SENG RM+DEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKM
Sbjct: 248 SENGKRMVDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKM 307
Query: 419 TFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
TFDSYLYK+VVPGNPLEDLKLAVNTIGSLVRANALRREMDK+++
Sbjct: 308 TFDSYLYKKVVPGNPLEDLKLAVNTIGSLVRANALRREMDKMSV 351
>gi|428777643|ref|YP_007169430.1| geranylgeranyl reductase [Halothece sp. PCC 7418]
gi|428691922|gb|AFZ45216.1| geranylgeranyl reductase [Halothece sp. PCC 7418]
Length = 405
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 276/405 (68%), Positives = 328/405 (80%), Gaps = 5/405 (1%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAE LAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 2 LRVAVVGSGPAGSSAAEVLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSNV VDI K EYIGM RREVLD +LR RA K GA++ING +++L
Sbjct: 62 RVRKMKMISPSNVTVDINLENK-DEYIGMCRREVLDGFLRNRAAKLGANLINGTVHRLEL 120
Query: 171 PRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P++ +PY L+Y ++ DG+ VG +TL+VD V+GADGANSRVAK+I+AGDY+YAIAFQ
Sbjct: 121 PQSENEPYTLHYADHSDGSS--VGTAKTLQVDLVVGADGANSRVAKAIDAGDYNYAIAFQ 178
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER++IP+EKM YYE LAEMYVGDDVSPDFY WVFPK DHVAVGTGT+ +K IK Q
Sbjct: 179 ERIRIPEEKMGYYEELAEMYVGDDVSPDFYAWVFPKFDHVAVGTGTMKVNKAKIKDLQAG 238
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA ++I GG+II+VEAHPIPEHPRP R+ GRVALVGDAAG VTK SGEGIYFAAKS
Sbjct: 239 IRARAAERITGGEIIKVEAHPIPEHPRPHRVRGRVALVGDAAGTVTKSSGEGIYFAAKSA 298
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+E S+NG R+ E DL+ YL++WDK Y TY VLD+LQ+VFYRS+ +REAFVE
Sbjct: 299 RMCAETIVETSKNGQRVPTEKDLKLYLKRWDKQYGMTYLVLDLLQRVFYRSDASREAFVE 358
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MC+D+ VQKMTFDSYLYK V PGNPL +K+ T+GSL+R +AL
Sbjct: 359 MCSDKDVQKMTFDSYLYKTVTPGNPLVQMKITAKTVGSLLRGHAL 403
>gi|225435999|ref|XP_002273133.1| PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic
[Vitis vinifera]
Length = 466
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 268/421 (63%), Positives = 328/421 (77%), Gaps = 8/421 (1%)
Query: 43 SPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFD 102
+P L+ R LR AVIGGGPAG +AAETLA G+ETFL ER + KPCGGAIPLCM+ EF
Sbjct: 53 NPPLSGRKLRAAVIGGGPAGSSAAETLAAGGIETFLFERSPASSKPCGGAIPLCMLEEFS 112
Query: 103 LPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVIN 162
+P +++DR+VT+MK+ISPSN+ VD G+TLKP+EYI M+RREVLD++LR RAE GA+ I
Sbjct: 113 IPPELVDRRVTRMKIISPSNLTVDFGKTLKPNEYIAMLRREVLDSFLRRRAESAGATAIT 172
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDY 222
L +DLP + PYV++Y G + +L VD VIGADGANSRVAKSI AGDY
Sbjct: 173 ALVTSLDLPSSPASPYVIHYN-------AGGSRHSLAVDVVIGADGANSRVAKSIKAGDY 225
Query: 223 DYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDI 282
AIAFQER+K+P+EKM YY++LAEMYVG+DVSPDFY WVFPKCDHVAVGTGTV K +I
Sbjct: 226 SCAIAFQERIKLPEEKMEYYQDLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCSKQNI 285
Query: 283 KKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIY 342
K +Q R R + KI GGK+I+VEAHPIPEHPRP R+ GRVALVGDAAGYVTKCSGEGIY
Sbjct: 286 KLYQRGIRERVEPKISGGKVIKVEAHPIPEHPRPVRIRGRVALVGDAAGYVTKCSGEGIY 345
Query: 343 FAAKSGRMCAEAIIEGSENGTRMIDEGDLRK-YLEKWDKTYWPTYKVLDVLQKVFYRSNP 401
FAAKSG+MCAEAI++ SE G RMI E DLR+ YL++WD Y TY++LD+L +VFY SN
Sbjct: 346 FAAKSGKMCAEAILKASEGGLRMISEEDLRREYLKEWDGKYLVTYRLLDLLHRVFYGSNA 405
Query: 402 AREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLT 461
AREA VE+C +EYVQ+MTF+SYLYKR+ G+ ED K+ NT GSL+R + R++ L
Sbjct: 406 AREALVELCGNEYVQRMTFESYLYKRLAEGDGWEDAKMVFNTFGSLIRCKIVGRDVQALR 465
Query: 462 I 462
+
Sbjct: 466 V 466
>gi|254416981|ref|ZP_05030728.1| geranylgeranyl reductase [Coleofasciculus chthonoplastes PCC 7420]
gi|196176148|gb|EDX71165.1| geranylgeranyl reductase [Coleofasciculus chthonoplastes PCC 7420]
Length = 436
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 274/405 (67%), Positives = 328/405 (80%), Gaps = 5/405 (1%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 33 LRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIIDR 92
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSN+ VDI +K EYIGM RRE+LD ++R RA K GA++ING K+D+
Sbjct: 93 RVRKMKMISPSNIEVDI-NLVKEDEYIGMCRREILDGFMRNRAAKLGATLINGTVHKLDI 151
Query: 171 PRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P + +PY L+Y ++ DG+ GV ++TL+VD VIGADGANSRVAK+I+AG+Y+YAIAFQ
Sbjct: 152 PTSNTEPYTLHYADHSDGSLSGV--QKTLKVDLVIGADGANSRVAKAIDAGNYNYAIAFQ 209
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER+++P + M YYE+LAEMYVG+DVSPDFY WVFPK DHVAVGTGT+ ++ IKK Q
Sbjct: 210 ERIRLPGDMMNYYEDLAEMYVGNDVSPDFYAWVFPKYDHVAVGTGTMKVNQAKIKKLQAG 269
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA K++GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS
Sbjct: 270 IRARAAKKLVGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSA 329
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+E S GTR+ E DL+ YL++WDK Y TYKVLD+LQ VFYRS+ REAFVE
Sbjct: 330 RMCAETIVETSNGGTRIPTEADLKLYLKRWDKKYGITYKVLDILQTVFYRSDATREAFVE 389
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MC+D VQ++TFDSYLYK VVP NPL LK+ TIGSL+R NAL
Sbjct: 390 MCSDLDVQRLTFDSYLYKTVVPANPLVQLKITAKTIGSLLRGNAL 434
>gi|428304744|ref|YP_007141569.1| geranylgeranyl reductase [Crinalium epipsammum PCC 9333]
gi|428246279|gb|AFZ12059.1| geranylgeranyl reductase [Crinalium epipsammum PCC 9333]
Length = 406
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 276/405 (68%), Positives = 322/405 (79%), Gaps = 5/405 (1%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP IIDR
Sbjct: 3 LRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPQIIDR 62
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSNV VDI K EYIGM RREVLD +LR+RA K GA +ING K+D+
Sbjct: 63 QVRKMKMISPSNVEVDI-NIEKKEEYIGMCRREVLDGFLRDRAAKLGAKLINGTVHKIDI 121
Query: 171 PRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P N Y L+Y D + G + G +TL+VD +IGADGANSRVAK+I+AGDY+YAIAFQ
Sbjct: 122 PGNNTDAYTLHYA--DHSNGSLEGTAKTLKVDLIIGADGANSRVAKAIDAGDYNYAIAFQ 179
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER+++P++KM YY +LAEMYVG+DVS DFY WVFPK DHVAVGTGT+ HK DIK Q
Sbjct: 180 ERIRLPEDKMAYYHDLAEMYVGNDVSTDFYAWVFPKYDHVAVGTGTMKVHKADIKNLQAG 239
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA K+ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAGYVTK SGEGIYFAAKSG
Sbjct: 240 IRARAAKKLAGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGYVTKSSGEGIYFAAKSG 299
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+E S++G ++ E DL+ YL++WDK Y TYKVLD+LQ VFYRS+ REAFVE
Sbjct: 300 RMCAETIVEVSQSGQKIPTENDLKLYLKRWDKKYGLTYKVLDILQSVFYRSDATREAFVE 359
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MCAD VQ++TFDSYLYK VVP NPL +K+ TI SL+R NAL
Sbjct: 360 MCADRDVQRLTFDSYLYKTVVPANPLVQMKITAKTIASLLRGNAL 404
>gi|428300909|ref|YP_007139215.1| geranylgeranyl reductase [Calothrix sp. PCC 6303]
gi|428237453|gb|AFZ03243.1| geranylgeranyl reductase [Calothrix sp. PCC 6303]
Length = 406
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 274/405 (67%), Positives = 321/405 (79%), Gaps = 3/405 (0%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAV+G GPAG +AAE LAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IID
Sbjct: 2 TLRVAVVGSGPAGSSAAEILAKAGIETYLFERKLDNAKPCGGAIPLCMVEEFDLPANIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSN VDI +K EYIGM RREVLDA+LR+RA GA++IN K+D
Sbjct: 62 RRVRKMKMISPSNREVDI-NLIKEDEYIGMCRREVLDAFLRDRAAALGANLINATVHKLD 120
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
+P N PY ++Y ++ + G G ++L+VDA+IGADGANSR+AK I+AGDY+YAIAFQ
Sbjct: 121 IPTNDTDPYTIHYVDHTES-GAQGIAKSLQVDAIIGADGANSRIAKEIDAGDYNYAIAFQ 179
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER++IPD KM YYE+LAEMYVGDDVS DFY WVFPK DHVAVGTGT+ HK IK+ Q
Sbjct: 180 ERIRIPDAKMAYYEDLAEMYVGDDVSTDFYAWVFPKYDHVAVGTGTMHVHKASIKQLQAG 239
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA K+ GGKII+VEAHPIPEHPRPRR+ GRVALVGDAAGYVTK SGEGIYFAAKSG
Sbjct: 240 IRARAAKKLEGGKIIKVEAHPIPEHPRPRRVVGRVALVGDAAGYVTKSSGEGIYFAAKSG 299
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAEAI+E S G + E DL+ Y+++WDK Y TYKVLD+LQ VFYRS+ REAFVE
Sbjct: 300 RMCAEAIVEFSNKGETIPTERDLKVYIKRWDKKYGLTYKVLDILQNVFYRSDATREAFVE 359
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MC+D VQK+TFDSYLYK VVP NP+ LK+ T+ SL+R NAL
Sbjct: 360 MCSDMDVQKLTFDSYLYKTVVPANPITQLKITAKTLASLLRGNAL 404
>gi|158335203|ref|YP_001516375.1| geranylgeranyl reductase [Acaryochloris marina MBIC11017]
gi|359460313|ref|ZP_09248876.1| geranylgeranyl reductase [Acaryochloris sp. CCMEE 5410]
gi|158305444|gb|ABW27061.1| geranylgeranyl reductase [Acaryochloris marina MBIC11017]
Length = 406
Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust.
Identities = 274/404 (67%), Positives = 322/404 (79%), Gaps = 3/404 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAETL K G+ET+L ERKLDN KPCGGAIPLCMV EFDLPL+IIDR
Sbjct: 3 LRVAVVGSGPAGSSAAETLVKAGIETYLFERKLDNAKPCGGAIPLCMVDEFDLPLEIIDR 62
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KM+MISPSNV VDI EYIGM RREVLD ++R+RA K GA +ING K+D
Sbjct: 63 QVRKMRMISPSNVEVDI-NIKNEGEYIGMCRREVLDGFMRDRAAKLGAKLINGTVNKLDF 121
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
P QPY ++Y + G + G +TL+VD VIGADGANSR+AK I AGDY+YAIAFQE
Sbjct: 122 PTGANQPYTIHYADLTGGRAE-GVMKTLQVDLVIGADGANSRIAKEIKAGDYNYAIAFQE 180
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLAT 289
R+++PDE M YY++ AEMYVGDDVS DFY WVFPK DHVAVGTGT+ ++ DIKK Q
Sbjct: 181 RIRLPDEYMAYYQDRAEMYVGDDVSTDFYAWVFPKYDHVAVGTGTMKVNQADIKKLQAGI 240
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R RA +++GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS R
Sbjct: 241 RARAAHRLVGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSAR 300
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
MCAEAI+E S NG R+ E +L+ YL++WDK Y TYKVLD+LQ+VFYRS+ REAFVEM
Sbjct: 301 MCAEAIVEFSNNGQRIPTEDELKIYLKRWDKAYGMTYKVLDILQRVFYRSDATREAFVEM 360
Query: 410 CADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
CADE VQ+MTFDSYLYK VVP NPL+ +K+ TIGSL+R NAL
Sbjct: 361 CADEDVQQMTFDSYLYKTVVPMNPLKQIKITAKTIGSLIRGNAL 404
>gi|428211023|ref|YP_007084167.1| geranylgeranyl reductase [Oscillatoria acuminata PCC 6304]
gi|427999404|gb|AFY80247.1| geranylgeranyl reductase [Oscillatoria acuminata PCC 6304]
Length = 406
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 275/405 (67%), Positives = 326/405 (80%), Gaps = 5/405 (1%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP IIDR
Sbjct: 3 LRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPDHIIDR 62
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSN+ VDI K EYIGM RRE+LD +LR+RAEK GA++ING K+D+
Sbjct: 63 RVRKMKMISPSNIEVDINLE-KQEEYIGMCRREILDGFLRDRAEKLGANLINGTVHKLDI 121
Query: 171 PRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P N PYVL+Y ++ DG+ G ++TL+VD VIGADGANSRVAK+I+AGDY+YAIAFQ
Sbjct: 122 PSNNTDPYVLHYADHSDGSVAGT--QKTLKVDLVIGADGANSRVAKAIDAGDYNYAIAFQ 179
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER+++P++KM YY +LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ ++ IKK Q
Sbjct: 180 ERIRLPEDKMAYYNDLAEMYVGTDVSPDFYAWVFPKYDHVAVGTGTMKVNQALIKKLQAG 239
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA ++ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS
Sbjct: 240 IRTRAAKRLEGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSA 299
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+E SE GTR+ E +L+ YL++WDK Y TY VLD+LQ+VFYR++ REAFVE
Sbjct: 300 RMCAETIVEFSEGGTRVPTEEELKIYLKRWDKKYGITYAVLDILQRVFYRTDATREAFVE 359
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MCAD VQ+MTFDSYLYK VVP NP +K+ TIGSL+R NAL
Sbjct: 360 MCADMDVQRMTFDSYLYKTVVPANPFVQMKITAKTIGSLLRGNAL 404
>gi|186683857|ref|YP_001867053.1| geranylgeranyl reductase [Nostoc punctiforme PCC 73102]
gi|186466309|gb|ACC82110.1| geranylgeranyl reductase [Nostoc punctiforme PCC 73102]
Length = 406
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 272/406 (66%), Positives = 325/406 (80%), Gaps = 5/406 (1%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAVIG GPAG +AAETLA +G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IID
Sbjct: 2 TLRVAVIGSGPAGSSAAETLAASGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSN VDI + EYIGM RREVLD +LR+RA K GA++IN K+D
Sbjct: 62 RRVRKMKMISPSNREVDI-NLINEDEYIGMCRREVLDGFLRDRAAKLGANLINATVHKLD 120
Query: 170 LPRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
+P N PY ++Y ++ +G G+ +TL+VD +IGADGANSRVAK ++AGDY+YAIAF
Sbjct: 121 IPGNNTDPYTIHYVDHTEGISQGIA--KTLKVDLIIGADGANSRVAKEMDAGDYNYAIAF 178
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQL 287
QER+++P++KM YY +LAEMYVGDDVS DFY WVFPK DHVAVGTGT+ +K IK+ Q
Sbjct: 179 QERIRLPEDKMAYYNDLAEMYVGDDVSTDFYAWVFPKYDHVAVGTGTMHINKASIKQLQA 238
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
R RA +K+ GGKII+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFAAKS
Sbjct: 239 GIRARASEKLAGGKIIKVEAHPIPEHPRPRRVVGRIALVGDAAGYVTKSSGEGIYFAAKS 298
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GRMCAE I+E S +G+R+ EGDL+ YL++WDK Y TYKVLD+LQ VFYRS+ REAFV
Sbjct: 299 GRMCAETIVEASNSGSRIPTEGDLKIYLKRWDKRYGLTYKVLDILQSVFYRSDATREAFV 358
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EMC D VQ++TFDSYLYK VVP NP+ LK+ TIGSL+R NAL
Sbjct: 359 EMCDDLDVQRLTFDSYLYKTVVPANPITQLKITAKTIGSLIRGNAL 404
>gi|32307576|gb|AAP79193.1| geranyl-geranyl reductase [Bigelowiella natans]
Length = 540
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 276/433 (63%), Positives = 334/433 (77%), Gaps = 9/433 (2%)
Query: 29 LPRQQKFRVSAA------KTSPKLTNRNLRVAVIGGGPAGGAAAETLAK-NGVETFLIER 81
+P+ KF + K K RVAVIGGGP+G AAAE AK G++TF+ ER
Sbjct: 90 MPKGTKFHCNWVAGERNLKGHAKADGSKYRVAVIGGGPSGSAAAEIFAKEKGIDTFIFER 149
Query: 82 KLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVR 141
K+DN KPCGGAIPLCMV EFDLP +IDRKV KMKMISPSN VD+G+TLKP+EYIGM R
Sbjct: 150 KMDNVKPCGGAIPLCMVDEFDLPESVIDRKVRKMKMISPSNRVVDVGRTLKPNEYIGMCR 209
Query: 142 REVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEY-DGTKGGVGEKRTLEV 200
REVLD ++R R+ GA INGL K+D+PR PYV++Y +Y D T GG G +T+E
Sbjct: 210 REVLDGFMRNRSVDLGAVPINGLVTKIDVPRGDSDPYVIHYQDYGDKTAGGAGTPKTMEF 269
Query: 201 DAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYG 260
D ++GADGANSRVAK+I+AG+Y+YAIAFQER+ I +EKM YY++LAEMYVGDDVSPDFY
Sbjct: 270 DVLVGADGANSRVAKAIDAGEYNYAIAFQERIAIDEEKMEYYKDLAEMYVGDDVSPDFYA 329
Query: 261 WVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS 320
WVFPK DHV VGTGTV ++ DI K+Q A R RAKD++ GGKII+VEAHPIPEHPRPRR+
Sbjct: 330 WVFPKYDHVGVGTGTVVNRPDIPKYQKAIRERAKDRLEGGKIIKVEAHPIPEHPRPRRVQ 389
Query: 321 GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLR-KYLEKWD 379
GR ALVGDAAGYVTKCSGEGIYFAAKSGRM A+AI++ + GTR+ + ++ Y+ +D
Sbjct: 390 GRAALVGDAAGYVTKCSGEGIYFAAKSGRMAAQAIVQLMQGGTRLPTQQEIEDTYIADYD 449
Query: 380 KTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKL 439
K Y TY VLD+LQKVFY SN AREAFVEMC +YVQK+TFDSYLYK V GNP++D+KL
Sbjct: 450 KKYQATYVVLDLLQKVFYSSNAAREAFVEMCDSDYVQKVTFDSYLYKTVQGGNPVDDIKL 509
Query: 440 AVNTIGSLVRANA 452
+T+GS+ RA A
Sbjct: 510 LFSTVGSIFRAQA 522
>gi|356501334|ref|XP_003519480.1| PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic-like
[Glycine max]
Length = 448
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 273/435 (62%), Positives = 332/435 (76%), Gaps = 11/435 (2%)
Query: 30 PRQQKFRVSAAKTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDN-CKP 88
P + F + A+K+ ++ R LR AVIGGGPAG +AAE LA GVETFL ER + KP
Sbjct: 23 PYLKSFTIKASKS---ISGRKLRAAVIGGGPAGSSAAEALASGGVETFLFERNPPSVAKP 79
Query: 89 CGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAY 148
CGGAIPLCM+ EFD+P +IDR VT M++ SPSN+AVD G+TLKPHE+I M+RREVLD++
Sbjct: 80 CGGAIPLCMLEEFDIPNHLIDRHVTHMRIFSPSNIAVDFGKTLKPHEFIAMLRREVLDSF 139
Query: 149 LRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208
LR RA GA+ I+GL +DLP + + PY ++YT +G+ +R+L VD VIGADG
Sbjct: 140 LRSRAHAAGATAISGLVTALDLPASPDAPYTVHYTA-NGS-----SRRSLAVDVVIGADG 193
Query: 209 ANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDH 268
ANSRVAK+I AGDY AIAFQER+K+PDEKM YYENLAEMYVGDDVSPDFY WVFPKCDH
Sbjct: 194 ANSRVAKAIGAGDYACAIAFQERIKLPDEKMAYYENLAEMYVGDDVSPDFYAWVFPKCDH 253
Query: 269 VAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGD 328
VAVGTGTV K DIK +Q R R K KI GGK+I+VEAHPIPEHPRP R+ GRVALVGD
Sbjct: 254 VAVGTGTVRSKKDIKLYQRGIRERVKPKINGGKVIKVEAHPIPEHPRPVRVRGRVALVGD 313
Query: 329 AAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRK-YLEKWDKTYWPTYK 387
AAGYVTKCSGEGIYFAAKSGR+C ++ SE G RMIDE DLR+ YL+ WD Y T++
Sbjct: 314 AAGYVTKCSGEGIYFAAKSGRVCGNGVVRASEGGDRMIDECDLRREYLKPWDAEYANTFR 373
Query: 388 VLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSL 447
LD+LQ+VFY SN REA VE+C DEYVQ+MTF+SYLYK++ G L+ KL +NT+GSL
Sbjct: 374 FLDLLQRVFYGSNACREALVELCGDEYVQRMTFESYLYKKLARGRVLDHAKLFMNTLGSL 433
Query: 448 VRANALRREMDKLTI 462
VR+ ++ M+ +
Sbjct: 434 VRSKVVQTSMESFIL 448
>gi|427732449|ref|YP_007078686.1| geranylgeranyl reductase [Nostoc sp. PCC 7524]
gi|427368368|gb|AFY51089.1| geranylgeranyl reductase [Nostoc sp. PCC 7524]
Length = 406
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 273/406 (67%), Positives = 325/406 (80%), Gaps = 5/406 (1%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IID
Sbjct: 2 TLRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSN VDI +K EYIGM RREVLD +LR RA K GA++IN K+D
Sbjct: 62 RQVRKMKMISPSNREVDI-NLIKQEEYIGMCRREVLDGFLRNRAAKLGANLINATVHKVD 120
Query: 170 LPRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
+P N PY ++Y D ++GG+ G +TL+VD +IGADGANSR+AK ++AGDY+YAIAF
Sbjct: 121 IPSNNTDPYTIHYV--DHSEGGLQGVTKTLKVDLIIGADGANSRIAKEMDAGDYNYAIAF 178
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQL 287
QER+++P +KM YY +LAEMYVG+DVS DFY WVFPK DHVAVGTGT+ +K IK+ Q
Sbjct: 179 QERIRLPQDKMGYYNDLAEMYVGNDVSTDFYAWVFPKYDHVAVGTGTMHVNKASIKQLQA 238
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
R RA K+ GGKII+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFAAKS
Sbjct: 239 GIRARAAKKLEGGKIIKVEAHPIPEHPRPRRVVGRIALVGDAAGYVTKSSGEGIYFAAKS 298
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GRMCAE I+E S+NG+R+ E +++ YL++WDK Y TYKVLD+LQ VFYRS+ REAFV
Sbjct: 299 GRMCAETIVEVSQNGSRIPTENEIKLYLKRWDKKYGLTYKVLDILQTVFYRSDATREAFV 358
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EMCAD VQK+TFDSYLYK VVP NP+ LK+ TIGSL+R NAL
Sbjct: 359 EMCADLDVQKLTFDSYLYKTVVPANPITQLKITAKTIGSLIRGNAL 404
>gi|282897405|ref|ZP_06305407.1| Geranylgeranyl reductase [Raphidiopsis brookii D9]
gi|281198057|gb|EFA72951.1| Geranylgeranyl reductase [Raphidiopsis brookii D9]
Length = 406
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 271/404 (67%), Positives = 320/404 (79%), Gaps = 3/404 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP DIIDR
Sbjct: 3 LRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPADIIDR 62
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V MKMISPSN VDI T EYIGM RREVLD +LR RA K GA++IN K+D+
Sbjct: 63 RVRNMKMISPSNREVDINLT-NQEEYIGMCRREVLDGFLRNRAAKLGANLINATVHKLDI 121
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
P N PY ++Y +++ G VG +TL+VD +IGADGANSRVAK ++AGDY+YAIAFQE
Sbjct: 122 PNNNSDPYTIHYVDHN-EGGSVGVAKTLKVDLIIGADGANSRVAKEMDAGDYNYAIAFQE 180
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLAT 289
R+++P++KM YY NLAEMYVGDDVS DFY W+FPK DHVAVGTGT+ +K IK+ Q
Sbjct: 181 RIRLPEDKMAYYNNLAEMYVGDDVSTDFYAWIFPKYDHVAVGTGTMHVNKASIKQLQAGI 240
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R RA +K+ GG II+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFAAKSGR
Sbjct: 241 RARAVEKLAGGTIIKVEAHPIPEHPRPRRVVGRIALVGDAAGYVTKSSGEGIYFAAKSGR 300
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
MCAE I+E S +G R+ E +L+ Y+++WDK Y TYKVLD+LQ VFYRS+ REAFVEM
Sbjct: 301 MCAETIVEVSNSGARIPSERELKLYIKRWDKKYGLTYKVLDLLQTVFYRSDATREAFVEM 360
Query: 410 CADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
C D VQK+TFDSYLYK VVP NP+ LK+ TIGSL+R NAL
Sbjct: 361 CDDMDVQKLTFDSYLYKTVVPANPITQLKITAKTIGSLLRGNAL 404
>gi|282901749|ref|ZP_06309664.1| Geranylgeranyl reductase [Cylindrospermopsis raciborskii CS-505]
gi|281193366|gb|EFA68348.1| Geranylgeranyl reductase [Cylindrospermopsis raciborskii CS-505]
Length = 406
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 269/404 (66%), Positives = 321/404 (79%), Gaps = 3/404 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP DIIDR
Sbjct: 3 LRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPADIIDR 62
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V MKMISPSN VDI + EYIGM RREVLD +LR RA K GA++IN K+D+
Sbjct: 63 RVRNMKMISPSNREVDI-NLINQEEYIGMCRREVLDGFLRNRAAKLGANLINATVHKLDI 121
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
P N PY ++Y +++ G VG +TL+VD +IGADGANSR+AK ++AGDY+YAIAFQE
Sbjct: 122 PNNNSDPYTIHYVDHN-EGGSVGVAKTLKVDLIIGADGANSRIAKEMDAGDYNYAIAFQE 180
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLAT 289
R+++P++KM YY NLAEMYVGDDVS DFY W+FPK DHVAVGTGT+ +K IK+ Q
Sbjct: 181 RIRLPEDKMAYYNNLAEMYVGDDVSTDFYAWIFPKYDHVAVGTGTMHVNKASIKQLQAGI 240
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R RA +K+ GG II+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFAAKSGR
Sbjct: 241 RARAAEKLAGGTIIKVEAHPIPEHPRPRRVVGRIALVGDAAGYVTKSSGEGIYFAAKSGR 300
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
MCAE I+E S +G R+ +E +L+ Y+++WDK Y TYKVLD+LQ VFYRS+ REAFVEM
Sbjct: 301 MCAETIVEVSNSGARIPNERELKLYIKRWDKKYGLTYKVLDLLQTVFYRSDATREAFVEM 360
Query: 410 CADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
C D VQK+TFDSYLYK VVP NP+ LK+ TIGSL+R NAL
Sbjct: 361 CDDMDVQKLTFDSYLYKTVVPANPITQLKITAKTIGSLLRGNAL 404
>gi|113475492|ref|YP_721553.1| geranylgeranyl reductase [Trichodesmium erythraeum IMS101]
gi|110166540|gb|ABG51080.1| geranylgeranyl reductase [Trichodesmium erythraeum IMS101]
Length = 406
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 273/406 (67%), Positives = 323/406 (79%), Gaps = 5/406 (1%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAV+G GPAG +AAETL K G+ET+L ERKL+N KPCGGAIPLCMV EFDLP +IID
Sbjct: 2 TLRVAVVGSGPAGSSAAETLVKAGIETYLFERKLNNAKPCGGAIPLCMVSEFDLPPEIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSNV VDI K EYIGM RREVLD +LR+RA GA++ING K+D
Sbjct: 62 RRVRKMKMISPSNVEVDI-HIEKEDEYIGMCRREVLDGFLRDRAASLGANLINGTVYKLD 120
Query: 170 LPRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
LP N +PY ++Y+ D ++G + G +TL+VD VIGADGANSRVAK+I+AGDY+YAIAF
Sbjct: 121 LPNNDREPYTIHYS--DHSQGDIQGTAKTLKVDLVIGADGANSRVAKAIDAGDYNYAIAF 178
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQL 287
QER+++PD M YYE+LAEMYVGDDVSPDFY WVFPK DHVAVGTGT+ H+ IK+ Q
Sbjct: 179 QERIRLPDHLMAYYEDLAEMYVGDDVSPDFYAWVFPKYDHVAVGTGTMKVHQAKIKQLQA 238
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
R RA ++ GG+II+VEAHPIPEHPRP R+ GRVALVGDAAG VTK SGEGIYFAAKS
Sbjct: 239 GIRARAAKRLEGGQIIKVEAHPIPEHPRPHRVRGRVALVGDAAGTVTKSSGEGIYFAAKS 298
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
RMCAE I+E S NG + E DL+ YL++WDK Y TYKVLD+LQ+VFYRS+ REAFV
Sbjct: 299 ARMCAETIVEASNNGAIIPTEADLKLYLKRWDKKYGMTYKVLDILQRVFYRSDATREAFV 358
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EMCAD VQK+TFDSYLYK VVP NPL +K+ TIGS++R +AL
Sbjct: 359 EMCADRDVQKLTFDSYLYKTVVPANPLIQMKITAKTIGSMLRGHAL 404
>gi|298492449|ref|YP_003722626.1| geranylgeranyl reductase ['Nostoc azollae' 0708]
gi|298234367|gb|ADI65503.1| geranylgeranyl reductase ['Nostoc azollae' 0708]
Length = 406
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 273/406 (67%), Positives = 322/406 (79%), Gaps = 5/406 (1%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAV+G GPAG +AAETLAK G+ET+LIERKLDN KPCGGAIPLCMV EFDLP +IID
Sbjct: 2 TLRVAVVGSGPAGSSAAETLAKAGIETYLIERKLDNAKPCGGAIPLCMVSEFDLPPEIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSN VDI + EYIGM RREVLD +LRERA K GA++IN K+D
Sbjct: 62 RRVRKMKMISPSNREVDI-NLVNEEEYIGMCRREVLDGFLRERAAKLGANLINATVHKLD 120
Query: 170 LPRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
+P N PY ++Y D T+GG G +TL+VD VIGADGANSR+AK ++AGDY+YAIAF
Sbjct: 121 IPTNNTDPYTIHYV--DHTEGGAQGITKTLKVDLVIGADGANSRIAKEMDAGDYNYAIAF 178
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQL 287
QER+++P +KM YY ++AEMYVG+DVS DFY WVFPK DHVAVGTGT+ +K +IK+ Q
Sbjct: 179 QERIRLPQDKMAYYNDMAEMYVGNDVSTDFYAWVFPKYDHVAVGTGTMQVNKANIKQLQA 238
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
R RA K+ GG+II+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFAAKS
Sbjct: 239 GIRARASKKLAGGQIIKVEAHPIPEHPRPRRVVGRIALVGDAAGYVTKSSGEGIYFAAKS 298
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GRMCAE I+E S NG R+ E DL+ YL++WDK Y TYKVLD+LQ VFYRS+ REAFV
Sbjct: 299 GRMCAETIVEVSNNGVRIPTENDLKIYLKRWDKKYGLTYKVLDILQTVFYRSDATREAFV 358
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EMC D VQ++TFDSYLYK VVP NP+ LK+ TI SL+R NAL
Sbjct: 359 EMCDDMDVQRLTFDSYLYKTVVPANPITQLKITAKTIASLLRGNAL 404
>gi|56751138|ref|YP_171839.1| geranylgeranyl hydrogenase [Synechococcus elongatus PCC 6301]
gi|81299196|ref|YP_399404.1| geranylgeranyl reductase [Synechococcus elongatus PCC 7942]
gi|56686097|dbj|BAD79319.1| geranylgeranyl hydrogenase [Synechococcus elongatus PCC 6301]
gi|81168077|gb|ABB56417.1| geranylgeranyl reductase [Synechococcus elongatus PCC 7942]
Length = 457
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 274/405 (67%), Positives = 323/405 (79%), Gaps = 5/405 (1%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+GGGPAG AAETL K G+ET+LIERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 45 LRVAVVGGGPAGSCAAETLVKAGIETYLIERKLDNAKPCGGAIPLCMVSEFDLPAEIIDR 104
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V MKMISPSN V+I EYIGM RREVLD +LR+RA K G +ING +++L
Sbjct: 105 RVRNMKMISPSNREVNINLD-NADEYIGMTRREVLDGFLRDRAAKLGTKLINGTLFRLEL 163
Query: 171 PRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P+ PYVL+Y ++ +G+ G+ TLEVD VIGADGANSR+AK+I+AGDY+YAIAFQ
Sbjct: 164 PKGDRDPYVLHYADHSNGSLEGI--PSTLEVDVVIGADGANSRIAKAIDAGDYNYAIAFQ 221
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER+++P++KM YYENLAEMYVG DVSPDFY WVFPK DHVAVGTGT+ ++ IKK Q
Sbjct: 222 ERIRLPEDKMHYYENLAEMYVGGDVSPDFYAWVFPKYDHVAVGTGTMHVNQRLIKKLQAG 281
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA +++ GGKII+VEAHPIPEHPRPRR+ GR ALVGDAAGYVTK SGEGIYFAAKSG
Sbjct: 282 IRARAANRLEGGKIIKVEAHPIPEHPRPRRVVGRAALVGDAAGYVTKSSGEGIYFAAKSG 341
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+E S NG R+ E DL++YL +WDK Y TYKVLD+LQ VFYRS+ REAFVE
Sbjct: 342 RMCAETIVETSNNGARIPTEADLKQYLRRWDKKYGTTYKVLDLLQTVFYRSDATREAFVE 401
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MC D+ VQ++TFDSYLYK VVP NPL LK+ T+GSL+R NAL
Sbjct: 402 MCDDKDVQRLTFDSYLYKTVVPANPLVQLKITAKTLGSLLRGNAL 446
>gi|58613459|gb|AAW79316.1| chloroplast geranylgeranyl reductase/hydrogenase [Heterocapsa
triquetra]
Length = 529
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 278/445 (62%), Positives = 337/445 (75%), Gaps = 9/445 (2%)
Query: 16 PQEQQHPHFIAQA--LPRQQKFRVSAAKT----SPKL-TNRNLRVAVIGGGPAGGAAAET 68
P+ Q+ +A A +P + + + AKT P+L R LRVAVIGGGP G + A+
Sbjct: 74 PRRQRKAAKLAGASMVPNKNQRTIRDAKTIVCAGPRLPEGRKLRVAVIGGGPGGASCADA 133
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LAK G ET+LIERKLDNCKPCGGAIP+CMVGEFDLP D+IDRKV KM MISP+N V IG
Sbjct: 134 LAKGGCETYLIERKLDNCKPCGGAIPMCMVGEFDLPTDLIDRKVRKMTMISPTNNEVQIG 193
Query: 129 QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGT 188
+TLK EYIGMVRREVLD +LRERA +NGA++INGLF +M +P++ ++ YVL Y ++
Sbjct: 194 RTLKDDEYIGMVRREVLDNFLRERAAENGATLINGLFTQMRMPKSEKESYVLTYNDFGDA 253
Query: 189 KGGV--GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLA 246
+G G K+TLEVD VIGADGANSRVAK I AGDY+YAIAFQER++IP++KM YY+ A
Sbjct: 254 EGDARKGVKKTLEVDVVIGADGANSRVAKEIEAGDYEYAIAFQERMRIPEDKMEYYKERA 313
Query: 247 EMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVE 306
EMYVG+DVSPDFY WVFPK DHVAVGTGTV K I+K+Q R RA +I GG+IIRVE
Sbjct: 314 EMYVGEDVSPDFYAWVFPKYDHVAVGTGTVVDKKGIQKYQQGIRERAAPRIEGGEIIRVE 373
Query: 307 AHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMI 366
AHPIPEHPRP R R L+GDAAGYVTKCSGEGIYFAAKSG MCA I+ SENGTR I
Sbjct: 374 AHPIPEHPRPWRTKDRCTLIGDAAGYVTKCSGEGIYFAAKSGLMCASEIVAASENGTRQI 433
Query: 367 DEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYK 426
+ DL +Y+ K+D Y PTY VLD LQK+FY S+ ARE+FV++C +YVQ++TFDSYLYK
Sbjct: 434 TQNDLMEYIRKFDSKYGPTYIVLDALQKLFYTSDAARESFVDLCELDYVQQVTFDSYLYK 493
Query: 427 RVVPGNPLEDLKLAVNTIGSLVRAN 451
V +P+ D+ L T+ SLV+ N
Sbjct: 494 TVQGNSPIGDVMLLGKTVSSLVKYN 518
>gi|428220672|ref|YP_007104842.1| geranylgeranyl reductase [Synechococcus sp. PCC 7502]
gi|427994012|gb|AFY72707.1| geranylgeranyl reductase [Synechococcus sp. PCC 7502]
Length = 406
Score = 559 bits (1441), Expect = e-157, Method: Compositional matrix adjust.
Identities = 278/406 (68%), Positives = 325/406 (80%), Gaps = 5/406 (1%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAVIGGGPAG AAETL K G+ET+L ERKLDN KPCGGAIPLCMV EFD+P IID
Sbjct: 2 TLRVAVIGGGPAGSCAAETLVKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDIPDRIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
RKV KMKMISPSNV VDI Q EYIGM RRE+LDA+LR+RA+ GA +ING + +
Sbjct: 62 RKVRKMKMISPSNVEVDI-QIENEGEYIGMCRRELLDAFLRDRAKDLGAKLINGRVLDIK 120
Query: 170 LPRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
+ +PY + Y+ D + GG+ G ++LEVD ++GADG NS VAK+I+AGDY+YAIAF
Sbjct: 121 IVEKGNKPYTISYS--DMSDGGIEGTLKSLEVDLIVGADGFNSVVAKAIDAGDYNYAIAF 178
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT-HKGDIKKFQL 287
QER+KI D+KM YYE+LAEMYVG+DVS DFY WVFPK DHVAVGTGT+ H+ DIKK Q
Sbjct: 179 QERIKISDDKMKYYEDLAEMYVGNDVSTDFYAWVFPKYDHVAVGTGTMKPHQRDIKKLQA 238
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
R RA ++I GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAGYVTK SGEGIYFAAKS
Sbjct: 239 GIRTRAHNRIEGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGYVTKSSGEGIYFAAKS 298
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GRMCAEAI+E S+N TR+ E DL+ YL++WDK Y TYKVLD+LQ+VFY S+ +REAFV
Sbjct: 299 GRMCAEAIVEFSQNNTRIPTEADLKVYLKRWDKKYGATYKVLDILQRVFYNSDASREAFV 358
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EMCAD+ VQKMTFDSYLYK VVP NP LK+ TIGSL+R NAL
Sbjct: 359 EMCADKDVQKMTFDSYLYKTVVPANPFVQLKITAKTIGSLLRGNAL 404
>gi|257058089|ref|YP_003135977.1| geranylgeranyl reductase [Cyanothece sp. PCC 8802]
gi|256588255|gb|ACU99141.1| geranylgeranyl reductase [Cyanothece sp. PCC 8802]
Length = 405
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 275/405 (67%), Positives = 323/405 (79%), Gaps = 5/405 (1%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAETL K G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 2 LRVAVVGSGPAGSSAAETLVKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSNVAVDI EYIGM RREVLD +LR+RA K GA++ING K+D+
Sbjct: 62 RVRKMKMISPSNVAVDINLD-NEDEYIGMCRREVLDGFLRDRAAKLGANLINGTVYKLDI 120
Query: 171 PRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P N PY L+Y D + G V GE +TL+VD VIGADGANSR+AK+I+AGDY+YAIAFQ
Sbjct: 121 PTNSTDPYTLHYA--DHSNGNVQGEMKTLKVDVVIGADGANSRIAKAIDAGDYNYAIAFQ 178
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER+++P +KM YYE+LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ +K IK Q
Sbjct: 179 ERIRLPQDKMAYYEDLAEMYVGTDVSPDFYAWVFPKYDHVAVGTGTMKVNKALIKDLQAG 238
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA ++ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS
Sbjct: 239 IRTRAAHRLEGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSA 298
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+E S G R+ E DL+ YL++WDK Y TY VLD+LQ+VFYR++ +REAFVE
Sbjct: 299 RMCAETIVEMSNAGQRIPTEDDLKVYLKRWDKKYGMTYLVLDILQRVFYRTDASREAFVE 358
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MCAD+ VQ+MTFDSYLYK VVP NPL +K+ TIGSL+R +AL
Sbjct: 359 MCADKDVQRMTFDSYLYKTVVPANPLVQMKITAKTIGSLLRGHAL 403
>gi|255561256|ref|XP_002521639.1| geranylgeranyl hydrogenase, putative [Ricinus communis]
gi|223539151|gb|EEF40746.1| geranylgeranyl hydrogenase, putative [Ricinus communis]
Length = 451
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 272/456 (59%), Positives = 338/456 (74%), Gaps = 15/456 (3%)
Query: 16 PQEQQHPHFIAQAL-------PRQQKFRVSAAKTSPKLTNRNLRVAVIGGGPAGGAAAET 68
P Q H H + L + F+ + ++ R LR AVIGGGPAG +AAE
Sbjct: 2 PIPQIHHHLYSTFLCPLYTPTSKSTFFKPQTLSITSAISGRKLRAAVIGGGPAGSSAAEA 61
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LA G+ETFL ER KPCGGAIPLCM+ EF++PL++IDR VT+MK++SPSN+ VD G
Sbjct: 62 LAAGGIETFLFERSTSTAKPCGGAIPLCMLDEFNIPLNLIDRHVTRMKIVSPSNLTVDFG 121
Query: 129 -QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDG 187
+TLKPHE I M+RREVLD++LR R + GA++I GL M +D+P ++PY++++ +
Sbjct: 122 SKTLKPHESIPMLRREVLDSFLRSRVQSKGATLIQGLVMHIDIPSLPKEPYIIHHIINNN 181
Query: 188 TKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAE 247
KG L VD VIGADGANSRVAKSINAG+Y AIAFQER+++PD+KM YY++LAE
Sbjct: 182 IKG------ELAVDVVIGADGANSRVAKSINAGNYSCAIAFQERIRLPDDKMEYYKDLAE 235
Query: 248 MYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEA 307
MYVGDDVSPDFY WVFPKCDHVAVGTGTV K +IK FQ R R +DKI GGK+I+VEA
Sbjct: 236 MYVGDDVSPDFYAWVFPKCDHVAVGTGTVCSKQNIKVFQRGIRERVRDKIKGGKVIKVEA 295
Query: 308 HPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMID 367
HPIPEHPRP R+ GRVALVGDAAGYVTKCSGEGIYFAAKSGRMC E I++ SE G +M+
Sbjct: 296 HPIPEHPRPTRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVKASEGGEKMVS 355
Query: 368 EGDL-RKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYK 426
E DL R+YL +WD Y T++ LD+LQ+VFY SN REA VE+C DEYVQ+MTFDSYLYK
Sbjct: 356 EEDLKREYLREWDNKYVNTFRFLDLLQRVFYGSNVGREALVELCGDEYVQRMTFDSYLYK 415
Query: 427 RVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
++ G+ ED+K+ +NT GSLVR + REM+ L +
Sbjct: 416 KLAGGDRWEDVKMVLNTFGSLVRCRIVGREMEGLKV 451
>gi|332708798|ref|ZP_08428769.1| geranylgeranyl reductase [Moorea producens 3L]
gi|332352340|gb|EGJ31909.1| geranylgeranyl reductase [Moorea producens 3L]
Length = 411
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 272/405 (67%), Positives = 326/405 (80%), Gaps = 5/405 (1%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 8 LRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIIDR 67
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V MKMISPS++ VDI K +EYIGM RREVLD ++R RA + GA++ING K+D+
Sbjct: 68 QVRNMKMISPSDLEVDI-HIEKENEYIGMCRREVLDGFMRNRAAELGANLINGTVYKLDI 126
Query: 171 PRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P + QPY +YY+ D + G V G +TL+VD VIGADGANSRVAK+I+AGDY+YAIAFQ
Sbjct: 127 PTSNSQPYTIYYS--DHSDGSVKGTHKTLKVDVVIGADGANSRVAKAIDAGDYNYAIAFQ 184
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER+ +P+ M YY++LAEMYVG+DVSPDFY WVFPK DHVAVGTGT+ ++ IKK Q
Sbjct: 185 ERISLPENMMNYYQDLAEMYVGNDVSPDFYAWVFPKYDHVAVGTGTMRVNQSLIKKLQAG 244
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA K++GGKII+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS
Sbjct: 245 IRARAAKKLVGGKIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSA 304
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+E S G+R+ E DL+ YL++WDK Y TYKVLD+LQ+VFY S+ +REAFVE
Sbjct: 305 RMCAETIVETSNGGSRIPTESDLKLYLKRWDKKYGMTYKVLDILQRVFYNSDASREAFVE 364
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MCAD+ VQ++TFDSYLYK VVP NPL +K+ TIGSL+R NAL
Sbjct: 365 MCADKDVQRLTFDSYLYKTVVPANPLIQMKITAKTIGSLLRGNAL 409
>gi|357493579|ref|XP_003617078.1| Geranylgeranyl reductase [Medicago truncatula]
gi|355518413|gb|AET00037.1| Geranylgeranyl reductase [Medicago truncatula]
Length = 450
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 279/464 (60%), Positives = 337/464 (72%), Gaps = 19/464 (4%)
Query: 4 MALK--SFTGLRQSPQEQQHPHFIAQALPRQQKFRVSAAK-TSPKLTNRNLRVAVIGGGP 60
MALK +F+ P + HF +SA+ T P + R LR AVIGGGP
Sbjct: 1 MALKIQTFSPSFSVPTSKPKQHF--------HSITISASNSTRPSIAGRKLRAAVIGGGP 52
Query: 61 AGGAAAETLAKNGVETFLIERKLDNC-KPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMIS 119
AG +AAE LA GVETFL ER + KPCGGAIPLCM+ EFD+P +IDR VT+M++ S
Sbjct: 53 AGSSAAEALASGGVETFLFERNPPSTPKPCGGAIPLCMLEEFDIPHHLIDRHVTQMRIFS 112
Query: 120 PSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYV 179
PSN+AVD G+TLKP+E+I M+RREVLD++LR RA GA I+GL +D+P + PY
Sbjct: 113 PSNIAVDFGKTLKPNEFIAMLRREVLDSFLRSRAVSAGAEHISGLVTSLDVPTSPNSPYT 172
Query: 180 LYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKM 239
+ YT +K +L VD VIGADGANSRVAKSI+AGDY AIAFQER+K+ DEKM
Sbjct: 173 INYTNKTSSKN------SLAVDVVIGADGANSRVAKSISAGDYTCAIAFQERIKLSDEKM 226
Query: 240 VYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILG 299
YYENLAEMY+GDDVSPDFY WVFPKCDHVAVGTGTV K DIK +Q A R RA KI G
Sbjct: 227 KYYENLAEMYIGDDVSPDFYAWVFPKCDHVAVGTGTVRSKHDIKLYQRAIRERAMSKIDG 286
Query: 300 GKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGS 359
GK+I+VEAHPIPEHPRP R+ GRVALVGDAAGYVTKCSGEGIYFAA SGRMC ++ S
Sbjct: 287 GKVIKVEAHPIPEHPRPIRVRGRVALVGDAAGYVTKCSGEGIYFAAMSGRMCGNGVVRAS 346
Query: 360 ENGTRMIDEGDL-RKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKM 418
E G +MI+E DL R+YL++WD Y T++ LD+LQ+VFY SN +REA VE+C DEYVQ+M
Sbjct: 347 EGGEKMINECDLMREYLKEWDAKYVNTFRFLDLLQRVFYGSNASREALVELCGDEYVQRM 406
Query: 419 TFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
TFDSYLYK++ G +D+KL +NTIGSL+R N + M L +
Sbjct: 407 TFDSYLYKKLAHGRVCDDVKLFMNTIGSLIRCNDVGTRMKGLIL 450
>gi|427735828|ref|YP_007055372.1| geranylgeranyl reductase [Rivularia sp. PCC 7116]
gi|427370869|gb|AFY54825.1| geranylgeranyl reductase [Rivularia sp. PCC 7116]
Length = 414
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 269/408 (65%), Positives = 319/408 (78%), Gaps = 3/408 (0%)
Query: 47 TNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLD 106
T LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP D
Sbjct: 7 TMPTLRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVDEFDLPAD 66
Query: 107 IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFM 166
IIDR+V KMKMISPSN VDI K EYIGM RREVLD ++R RA K GA +IN
Sbjct: 67 IIDRQVRKMKMISPSNREVDINLE-KQDEYIGMCRREVLDGFMRNRAAKLGAHLINATVH 125
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAI 226
K+D P+N PY ++Y ++ + G G +TL+VD +IGADGANSR+AK ++AGDY+YAI
Sbjct: 126 KLDFPKNNTDPYTIHYVDHTES-GAKGIAKTLKVDLIIGADGANSRIAKEMDAGDYNYAI 184
Query: 227 AFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKF 285
AFQER+++P++KM YY +LAEMYVGDDVS DFY WVFPK DHVAVGTGT+ +K IK+
Sbjct: 185 AFQERIRLPEDKMAYYNDLAEMYVGDDVSTDFYAWVFPKYDHVAVGTGTMHINKASIKQL 244
Query: 286 QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAA 345
Q R+RA K+ GG II+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFAA
Sbjct: 245 QAGIRSRASKKLAGGSIIKVEAHPIPEHPRPRRVVGRIALVGDAAGYVTKSSGEGIYFAA 304
Query: 346 KSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREA 405
KSGRMCAE I+E S +G + E DL+ YL++WDK Y TYKVLD+LQ VFYRS+ REA
Sbjct: 305 KSGRMCAETIVEISNSGQSIPTEADLKIYLKRWDKKYGLTYKVLDILQNVFYRSDATREA 364
Query: 406 FVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
FVEMC D VQ++TFDSYLYK VVP NP+ +K+ TIGSL+R NAL
Sbjct: 365 FVEMCDDRDVQRLTFDSYLYKTVVPANPITQMKITAKTIGSLIRGNAL 412
>gi|443311064|ref|ZP_21040699.1| geranylgeranyl reductase [Synechocystis sp. PCC 7509]
gi|442778913|gb|ELR89171.1| geranylgeranyl reductase [Synechocystis sp. PCC 7509]
Length = 408
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 269/405 (66%), Positives = 317/405 (78%), Gaps = 3/405 (0%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAV+G GPAG +AAETLAK G+ETFL ERKLDN KPCGGAIPLCMV EFDLP IID
Sbjct: 4 TLRVAVVGSGPAGSSAAETLAKAGIETFLFERKLDNAKPCGGAIPLCMVSEFDLPPHIID 63
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSN VDI + EYIGM RREVLD ++R+RA GA +IN K+D
Sbjct: 64 RRVRKMKMISPSNREVDI-NLVNEDEYIGMCRREVLDGFMRDRAASLGAKLINATVHKLD 122
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
+P N PY ++Y +++ G G +TL+VD +IGADGANSR+AK I+AGDY+YAIAFQ
Sbjct: 123 IPTNNNDPYTIHYIDHN-EGGSQGVAKTLKVDVIIGADGANSRIAKEIDAGDYNYAIAFQ 181
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER+++P +M YY +LAEMYVGDDVS DFY WVFPK DHVAVGTGT+ HK IK+ Q
Sbjct: 182 ERIRLPQAQMDYYNDLAEMYVGDDVSTDFYAWVFPKYDHVAVGTGTMQVHKASIKQLQAG 241
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA K++GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAGYVTK SGEGIYFAAKSG
Sbjct: 242 IRARAAKKLVGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGYVTKSSGEGIYFAAKSG 301
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE IIE S +G ++ E DL+ YL++WD+ Y TYKVLD+LQ VFYR++ REAFVE
Sbjct: 302 RMCAETIIEVSNSGAKIPTENDLKLYLKRWDRKYGLTYKVLDILQSVFYRTDATREAFVE 361
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MCAD VQK+TFDSYLYK VVP NP LK+ T+GSL+R NAL
Sbjct: 362 MCADMDVQKLTFDSYLYKTVVPANPFTQLKITAKTLGSLIRGNAL 406
>gi|218245067|ref|YP_002370438.1| geranylgeranyl reductase [Cyanothece sp. PCC 8801]
gi|218165545|gb|ACK64282.1| geranylgeranyl reductase [Cyanothece sp. PCC 8801]
Length = 405
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 272/404 (67%), Positives = 321/404 (79%), Gaps = 3/404 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAETL K G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 2 LRVAVVGSGPAGSSAAETLVKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSNVAVDI EYIGM RREVLD +LR+RA K GA++ING K+D+
Sbjct: 62 RVRKMKMISPSNVAVDINLD-NEDEYIGMCRREVLDGFLRDRAAKLGANLINGTVYKLDI 120
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
P N PY L+Y ++ GE +TL+VD VIGADGANSR+AK+I+AGDY+YAIAFQE
Sbjct: 121 PTNSTDPYTLHYADHSNGNAQ-GEMKTLKVDVVIGADGANSRIAKAIDAGDYNYAIAFQE 179
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLAT 289
R+++P +KM YYE+LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ +K IK Q
Sbjct: 180 RIRLPQDKMAYYEDLAEMYVGTDVSPDFYAWVFPKYDHVAVGTGTMKVNKALIKDLQAGI 239
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R RA ++ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS R
Sbjct: 240 RTRAAHRLEGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSAR 299
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
MCAE I+E S G R+ E DL+ YL++WDK Y TY VLD+LQ+VFYR++ +REAFVEM
Sbjct: 300 MCAETIVEMSNAGQRIPTEDDLKVYLKRWDKKYGMTYLVLDILQRVFYRTDASREAFVEM 359
Query: 410 CADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
CAD+ VQ+MTFDSYLYK VVP NPL +K+ TIGSL+R +AL
Sbjct: 360 CADKDVQRMTFDSYLYKTVVPANPLVQMKITAKTIGSLLRGHAL 403
>gi|209402481|gb|ACI45963.1| putative plastid geranylgeranyl reductase precusor [Pyropia
yezoensis]
Length = 477
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 272/429 (63%), Positives = 324/429 (75%), Gaps = 11/429 (2%)
Query: 31 RQQKFRVSAAKTSP------KLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD 84
R F + A+TSP + + NLRVAV+GGGPAG AE LAK G+E L ERK+D
Sbjct: 39 RASFFGAAVAQTSPVPQAKSPVLSMNLRVAVVGGGPAGSCCAEELAKAGIEVTLFERKMD 98
Query: 85 NCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREV 144
N KPCGGAIPLCMV EF LP +IIDRKV KM MISPSN IG TLKPHEYIGM RRE+
Sbjct: 99 NAKPCGGAIPLCMVDEFSLPEEIIDRKVRKMAMISPSNKVSQIGATLKPHEYIGMTRREI 158
Query: 145 LDAYLRERAEKNGASVINGLFMKMDLPR--NFEQPYVLYYTEY-DGTKGGVGEKRTLEVD 201
LD YLR+RA GA INGL + +P N +PYV+ Y++Y + TKGG + +TLEVD
Sbjct: 159 LDGYLRDRAISLGAKPINGLVTDIKIPSDVNSSEPYVISYSDYAESTKGG-AQGKTLEVD 217
Query: 202 AVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGW 261
+IGADGANSRVAK+I+AGDY YAIAFQER+K+P +M YYE LAEMYVGDDVSPDFY W
Sbjct: 218 YIIGADGANSRVAKAIDAGDYQYAIAFQERIKLPAAQMEYYEELAEMYVGDDVSPDFYAW 277
Query: 262 VFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSG 321
VFPK DHV VGTGTV + IKK+Q A R RA DK+ GGKII++EAHPIPEHPRPRR G
Sbjct: 278 VFPKYDHVGVGTGTVIDRPSIKKYQQAIRTRAADKLAGGKIIKIEAHPIPEHPRPRRCVG 337
Query: 322 RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLR-KYLEKWDK 380
RVAL+GDAAGYVTK SGEGIYFAAKSGRM EA++ S G R E D++ Y++ +D+
Sbjct: 338 RVALIGDAAGYVTKASGEGIYFAAKSGRMAGEALVALSNKGARTPTEADIKGSYIKDFDR 397
Query: 381 TYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLA 440
YW TYK LD+LQ VFY+++ +E+FVE+C DEYVQ++TFDSYLYK V NP+ED+KL
Sbjct: 398 KYWATYKALDILQSVFYKNDKTKESFVELCDDEYVQRVTFDSYLYKTVTTVNPVEDMKLL 457
Query: 441 VNTIGSLVR 449
T+GSLV+
Sbjct: 458 FRTVGSLVK 466
>gi|434392313|ref|YP_007127260.1| geranylgeranyl reductase [Gloeocapsa sp. PCC 7428]
gi|428264154|gb|AFZ30100.1| geranylgeranyl reductase [Gloeocapsa sp. PCC 7428]
Length = 406
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 268/406 (66%), Positives = 325/406 (80%), Gaps = 5/406 (1%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP IID
Sbjct: 2 TLRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPQIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSN VDI + EYIGM RREVLD +LR+RA K GA++IN K+D
Sbjct: 62 RQVRKMKMISPSNREVDI-NLVNEDEYIGMCRREVLDGFLRDRAAKLGANLINATVHKLD 120
Query: 170 LPRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
+P+N PY ++Y D ++GG G ++L+VDA+IGADGANSR+AK I+AGDY+YAIAF
Sbjct: 121 IPQNNTDPYTIHYV--DHSEGGAQGIAKSLKVDAIIGADGANSRIAKEIDAGDYNYAIAF 178
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQL 287
QER+++P+ +M YY +LAEMYVG+DVS DFY WVFPK DHVAVGTGT+ +K IK+ Q
Sbjct: 179 QERIRLPEAQMAYYNDLAEMYVGNDVSTDFYAWVFPKYDHVAVGTGTMQVNKASIKQLQA 238
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
R RA K++GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAGYVTK SGEGIYFAAKS
Sbjct: 239 GIRARAARKLVGGQIIKVEAHPIPEHPRPRRVVGRVALVGDAAGYVTKSSGEGIYFAAKS 298
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GRMCAE ++E S+ GTR+ E +L+ YL++WD+ Y TYKVLD+LQ VFYRS+ REAFV
Sbjct: 299 GRMCAETLVEVSQGGTRIPTESELKVYLKRWDRKYGMTYKVLDLLQTVFYRSDATREAFV 358
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EMCAD VQ++TFDSYLYK VVP NP+ +K+ T+GSL+R NAL
Sbjct: 359 EMCADRDVQRLTFDSYLYKTVVPANPITQMKITAKTLGSLLRGNAL 404
>gi|428203400|ref|YP_007081989.1| geranylgeranyl reductase [Pleurocapsa sp. PCC 7327]
gi|427980832|gb|AFY78432.1| geranylgeranyl reductase [Pleurocapsa sp. PCC 7327]
Length = 406
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/405 (67%), Positives = 321/405 (79%), Gaps = 5/405 (1%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAE LAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 3 LRVAVVGSGPAGSSAAEVLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIIDR 62
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSN+ VDI K EYIGM RREVLD ++R RA K GA++ING ++D+
Sbjct: 63 RVRKMKMISPSNIEVDINLENK-DEYIGMCRREVLDGFMRSRAAKLGANLINGTVYQLDI 121
Query: 171 PRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P N PY L+Y +Y +G GV +TL+ D VIGADGANSR+AK+I+AGDY+YAIAFQ
Sbjct: 122 PSNNTDPYTLHYADYSNGDAQGV--IKTLKADVVIGADGANSRIAKAIDAGDYNYAIAFQ 179
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER+++P++KM YYE LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ +K IK Q+
Sbjct: 180 ERIRLPEDKMNYYEELAEMYVGKDVSPDFYAWVFPKYDHVAVGTGTMKVNKAIIKDLQMG 239
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA K+ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS
Sbjct: 240 IRTRAARKLEGGQIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSA 299
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+E S G R+ E DL+ YL++WDK Y TY VLD+LQ+VFYR++ REAFVE
Sbjct: 300 RMCAETIVEASNGGQRLPTEDDLKLYLKRWDKKYGMTYLVLDILQRVFYRTDATREAFVE 359
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MCAD+ VQKMTFDSYLYK VVP NPL +K+ TIGSL+R NAL
Sbjct: 360 MCADKDVQKMTFDSYLYKTVVPANPLVQMKITAKTIGSLLRGNAL 404
>gi|428217216|ref|YP_007101681.1| geranylgeranyl reductase [Pseudanabaena sp. PCC 7367]
gi|427988998|gb|AFY69253.1| geranylgeranyl reductase [Pseudanabaena sp. PCC 7367]
Length = 406
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 269/405 (66%), Positives = 321/405 (79%), Gaps = 3/405 (0%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAV+GGGPAG +AAE LAK G+ET++ ERKLDN KPCGGAIPLCMV EF+LP +IID
Sbjct: 2 TLRVAVVGGGPAGSSAAEVLAKAGIETYIFERKLDNAKPCGGAIPLCMVSEFELPPEIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSN VDI +K EYIGM RRE+LD ++R RA + GA +ING +++
Sbjct: 62 RRVRKMKMISPSNREVDI-SLVKTDEYIGMCRREILDGFMRNRAHELGAELINGRVVEIK 120
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
+ + PYV+ Y + G G +R+LEVD ++GADGANS VA++INAGDY+YAIAFQ
Sbjct: 121 ITDKGKSPYVIEYNDMSAG-GSQGVRRSLEVDLIVGADGANSVVAEAINAGDYNYAIAFQ 179
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER++IP +KM YYE LAEMYVGDDVS DFY WVFPK DHVAVGTGT+ HK DIKK Q
Sbjct: 180 ERIRIPPDKMKYYEELAEMYVGDDVSTDFYAWVFPKYDHVAVGTGTMKVHKKDIKKLQAG 239
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA+ +I GG++I++EAHPIPEHPRPRR+ GRVALVGDAAGYVTK SGEGIYFAAKSG
Sbjct: 240 IRARAEKRIEGGEVIKIEAHPIPEHPRPRRVVGRVALVGDAAGYVTKSSGEGIYFAAKSG 299
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAEAI+E ++ G R+ E DL+ YL++WDK Y TYKVLD+LQ+VFY SN +REAFVE
Sbjct: 300 RMCAEAIVEFAQQGQRIPTEADLKVYLKRWDKAYGMTYKVLDILQRVFYSSNASREAFVE 359
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MCAD VQK+TFDSYLYK VVP NP LK+ TI SL+R NAL
Sbjct: 360 MCADMDVQKLTFDSYLYKTVVPANPFTQLKITAKTIASLIRGNAL 404
>gi|443475246|ref|ZP_21065202.1| geranylgeranyl reductase [Pseudanabaena biceps PCC 7429]
gi|443019965|gb|ELS33985.1| geranylgeranyl reductase [Pseudanabaena biceps PCC 7429]
Length = 406
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 275/406 (67%), Positives = 322/406 (79%), Gaps = 5/406 (1%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAV+GGGPAG AAETLAK G+ET++ ERKLDN KPCGGAIPLCMV EFDLP +IID
Sbjct: 2 TLRVAVVGGGPAGSCAAETLAKAGIETYIFERKLDNAKPCGGAIPLCMVSEFDLPPEIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V MKMISPSNV VDI + P EYIGM RRE+LDA+LR RA GA +ING + +
Sbjct: 62 RRVRNMKMISPSNVEVDI-KLDNPDEYIGMCRREILDAFLRNRAADLGAKLINGRILDIK 120
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
+ N +QPYVL Y+++ G G RTLEVD ++GADGANS VAK+I+AGDY+YAIAFQ
Sbjct: 121 ITENGKQPYVLTYSDF-AEGGNEGIMRTLEVDLIVGADGANSVVAKAIDAGDYNYAIAFQ 179
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD--IKKFQL 287
ER++I +KM YY++LAEMYVGDDVSPDFY WVFPK DHVAVGTGT+ HK IK+ Q
Sbjct: 180 ERIRISPDKMEYYKDLAEMYVGDDVSPDFYAWVFPKYDHVAVGTGTM-HKNQRMIKQLQA 238
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
R RA +I GG++I+VEAHPIPEHPRPRR+ GRVALVGDAAGYVTK SGEGIYFAAKS
Sbjct: 239 GIRARALPRIEGGEVIKVEAHPIPEHPRPRRVVGRVALVGDAAGYVTKSSGEGIYFAAKS 298
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GRMCAEAI+E +E G R+ E DL+ Y+++WDK Y TYKVLD+LQ VFY +N REAFV
Sbjct: 299 GRMCAEAIVEFAEAGKRIPTEADLKVYIKRWDKQYGLTYKVLDILQNVFYATNATREAFV 358
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EMCAD+ VQK+TFDSYLYK VVP NP LK+ TIGSL+R NAL
Sbjct: 359 EMCADKDVQKLTFDSYLYKTVVPANPFTQLKITAKTIGSLLRGNAL 404
>gi|119511090|ref|ZP_01630209.1| Geranylgeranyl reductase [Nodularia spumigena CCY9414]
gi|119464261|gb|EAW45179.1| Geranylgeranyl reductase [Nodularia spumigena CCY9414]
Length = 406
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/406 (66%), Positives = 321/406 (79%), Gaps = 5/406 (1%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IID
Sbjct: 2 TLRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVDEFDLPPEIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSN V+I +K EYIGM RREVLD +LR+RA K GA++IN K+D
Sbjct: 62 RRVRKMKMISPSNREVNI-NIVKEDEYIGMCRREVLDGFLRDRAAKLGANLINATVHKLD 120
Query: 170 LPRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
+P N PY ++Y D T+GG G +TL+VD +IGADGANSR+AK ++AGDY+YAIAF
Sbjct: 121 IPTNNTSPYTIHYV--DHTEGGSQGITKTLKVDLIIGADGANSRIAKEMDAGDYNYAIAF 178
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQL 287
QER+++P +KM YY +LAEMYVG+DVS DFY WVFPK DHVAVGTGT+ +K IK+ Q
Sbjct: 179 QERIRLPQDKMDYYNDLAEMYVGNDVSTDFYAWVFPKYDHVAVGTGTMQVNKASIKQLQA 238
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
R RA +K+ GGKII+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFAAKS
Sbjct: 239 GIRARASEKLAGGKIIKVEAHPIPEHPRPRRVVGRIALVGDAAGYVTKSSGEGIYFAAKS 298
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GRMCAE I+E S +G + E DL+ YL++WDK Y TYKVLD+LQ VFYRS+ REAFV
Sbjct: 299 GRMCAETIVEMSNSGATIPTEKDLKVYLKRWDKKYGLTYKVLDILQTVFYRSDATREAFV 358
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EMC D VQK+TFDSYLYK VVP NP LK+ T+GSL+R NAL
Sbjct: 359 EMCDDLDVQKLTFDSYLYKTVVPANPFTQLKITAKTLGSLIRGNAL 404
>gi|428208884|ref|YP_007093237.1| geranylgeranyl reductase [Chroococcidiopsis thermalis PCC 7203]
gi|428010805|gb|AFY89368.1| geranylgeranyl reductase [Chroococcidiopsis thermalis PCC 7203]
Length = 406
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/406 (65%), Positives = 323/406 (79%), Gaps = 5/406 (1%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAV+G GPAG +AAE LAK G+ET+LIERKLDN KPCGGAIPLCMV EFDLP +IID
Sbjct: 2 TLRVAVVGSGPAGSSAAEVLAKAGIETYLIERKLDNAKPCGGAIPLCMVSEFDLPPEIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V +MKMISPSN VDI + EYIGM RREVLD +LR RA + GA +IN K+D
Sbjct: 62 RQVRRMKMISPSNREVDI-NLVNEDEYIGMCRREVLDGFLRNRAAQLGAILINATVHKLD 120
Query: 170 LPRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
P N ++PY ++Y D ++GG G +TL+VD VIGADGANSR+AK ++AGDY++AIAF
Sbjct: 121 FPTNSKEPYTIHYV--DHSEGGTQGVAKTLKVDLVIGADGANSRIAKEMDAGDYNFAIAF 178
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQL 287
QER+++P +KM YY+++AEMYVG+DVS DFY WVFPK DHVAVGTGT+ +K IK+ Q
Sbjct: 179 QERIRLPQDKMAYYQDMAEMYVGNDVSTDFYAWVFPKYDHVAVGTGTMQVNKASIKQLQA 238
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
R RA K+ GG+II+VEAHPIPEHPRPRR+ GR+AL+GDAAGYVTK SGEGIYFAAKS
Sbjct: 239 GIRARAARKLAGGQIIKVEAHPIPEHPRPRRVVGRIALIGDAAGYVTKSSGEGIYFAAKS 298
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GRMCAE I+E S+ G+R+ E DL+ YL++WD+ Y TYKVLD+LQ VFYRS+ REAFV
Sbjct: 299 GRMCAETIVEFSQGGSRIPTEDDLKVYLKRWDRKYGITYKVLDILQTVFYRSDATREAFV 358
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EMCAD VQK+TFDSYLYK VVP NP+ LK+ TIGSL+R NAL
Sbjct: 359 EMCADLDVQKLTFDSYLYKTVVPANPITQLKITAKTIGSLIRGNAL 404
>gi|307152319|ref|YP_003887703.1| geranylgeranyl reductase [Cyanothece sp. PCC 7822]
gi|306982547|gb|ADN14428.1| geranylgeranyl reductase [Cyanothece sp. PCC 7822]
Length = 405
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/405 (66%), Positives = 322/405 (79%), Gaps = 5/405 (1%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 2 LRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSN+ VDI EYIGM RREVLD Y+R RA K GA++IN K+D+
Sbjct: 62 RVRKMKMISPSNIEVDINLD-NQEEYIGMCRREVLDGYMRNRAAKLGATLINATVYKLDI 120
Query: 171 PRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P N PY ++Y ++ DG+ G+ K+TL+VD VIGADGANSR+AK+I+AGDY+YAIAFQ
Sbjct: 121 PTNNTDPYTIHYADHSDGSIEGI--KKTLKVDVVIGADGANSRIAKAIDAGDYNYAIAFQ 178
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER+++P +KM YYE++AEMYVG DVSPDFY WVFPK DHVAVGTGT+ +K IK Q
Sbjct: 179 ERIRLPQDKMAYYEDMAEMYVGKDVSPDFYAWVFPKYDHVAVGTGTMKVNKAMIKDLQAG 238
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA K+ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS
Sbjct: 239 IRTRAARKLEGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSA 298
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+E S G R+ E DL+ YL++WDK Y TY VLD+LQ+VFYRS+ AREAFVE
Sbjct: 299 RMCAETIVETSNGGQRIPTEDDLKLYLKRWDKKYGMTYLVLDILQRVFYRSDAAREAFVE 358
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MC+D+ VQ++TFDSYLYK VVP NPL +K+ TIGSL+R AL
Sbjct: 359 MCSDKDVQRLTFDSYLYKTVVPANPLIQMKITAKTIGSLLRGYAL 403
>gi|443322504|ref|ZP_21051525.1| geranylgeranyl reductase [Gloeocapsa sp. PCC 73106]
gi|442787772|gb|ELR97484.1| geranylgeranyl reductase [Gloeocapsa sp. PCC 73106]
Length = 406
Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust.
Identities = 268/405 (66%), Positives = 321/405 (79%), Gaps = 5/405 (1%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
+RVAV+G GPAG +AAETL K G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 3 IRVAVVGSGPAGSSAAETLVKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPQEIIDR 62
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
KV KMKMISPSN+ VDI K EYIGM RREVLD YLR+RA GA++ING ++D+
Sbjct: 63 KVRKMKMISPSNIEVDI-NIEKEDEYIGMCRREVLDGYLRDRAASLGANLINGTVYQIDI 121
Query: 171 PRNFEQPYVLYYTEYD-GTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P N PY ++Y ++ G G+ +TL+ D +IGADGANSRVAK+I+AGDY+YAIAFQ
Sbjct: 122 PNNNTDPYTIHYADHSQGDAKGI--MKTLKADVIIGADGANSRVAKAIDAGDYNYAIAFQ 179
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER+++P++KM YYE+LAEMYVG+DVSPDFY WVFPK DHVAVGTGT+ +K IK Q+
Sbjct: 180 ERIRLPEDKMAYYEDLAEMYVGNDVSPDFYAWVFPKYDHVAVGTGTMKVNKSIIKDLQVG 239
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
RNRA K+ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS
Sbjct: 240 IRNRAARKLAGGQIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSA 299
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+E ++ G + E DL+ YL++WDK Y TY VLD+LQ+VFYRS+ REAFVE
Sbjct: 300 RMCAETIVETTQGGQHLPTEDDLKLYLKRWDKKYGLTYLVLDLLQRVFYRSDATREAFVE 359
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MC+D VQK+TFDSYLYK VVP NPL +K+ T GSL+R NAL
Sbjct: 360 MCSDRDVQKLTFDSYLYKTVVPANPLIQMKITAKTFGSLIRGNAL 404
>gi|414077314|ref|YP_006996632.1| geranylgeranyl reductase [Anabaena sp. 90]
gi|413970730|gb|AFW94819.1| geranylgeranyl reductase [Anabaena sp. 90]
Length = 414
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/405 (65%), Positives = 318/405 (78%), Gaps = 3/405 (0%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAV+G GPAG AAETLAK G+ET+L ERKLD KPCGGAIPLCMV EFDLP +IID
Sbjct: 10 TLRVAVVGSGPAGSCAAETLAKAGIETYLFERKLDYAKPCGGAIPLCMVKEFDLPPEIID 69
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSN VDI + EYIGM RREVLD +LR+RAEK GA++IN K+D
Sbjct: 70 RQVRKMKMISPSNREVDI-NLINQDEYIGMCRREVLDGFLRDRAEKLGANLINATVHKVD 128
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
+P PY ++Y ++ G +G G +TL+VD ++GADGANSR+AK + AGDY+YAIAFQ
Sbjct: 129 IPAGKSDPYTIHYVDHTG-EGAQGVTKTLKVDLIVGADGANSRIAKDMGAGDYNYAIAFQ 187
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER+++P +KM YY LAEMYVGDDVS DFY WVFPK DHVAVGTGT+ +K IK+FQ
Sbjct: 188 ERIRLPQDKMAYYNELAEMYVGDDVSTDFYAWVFPKYDHVAVGTGTMHINKARIKQFQAG 247
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA +K+ GG+II++EAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFAAKSG
Sbjct: 248 IRARASEKLAGGEIIKIEAHPIPEHPRPRRVVGRIALVGDAAGYVTKSSGEGIYFAAKSG 307
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE+I+E + G R+ E DL+ YL++WDK Y TYKVLD+LQ VFYRS+ REAFVE
Sbjct: 308 RMCAESIVEAANGGARIPTEADLKVYLKRWDKKYGLTYKVLDILQNVFYRSDATREAFVE 367
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MC D VQK+TFDSYLYK VVP NP LK+ T+GSL+R NAL
Sbjct: 368 MCDDMDVQKLTFDSYLYKTVVPANPFTQLKITAKTLGSLIRGNAL 412
>gi|425448806|ref|ZP_18828650.1| Geranylgeranyl diphosphate reductase [Microcystis aeruginosa PCC
7941]
gi|389768735|emb|CCI06231.1| Geranylgeranyl diphosphate reductase [Microcystis aeruginosa PCC
7941]
Length = 405
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/404 (66%), Positives = 318/404 (78%), Gaps = 3/404 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 2 LRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSNV VDI EYIGM RREVLD ++RERA K GA +ING +D+
Sbjct: 62 RVRKMKMISPSNVEVDINLD-NQDEYIGMCRREVLDGFMRERAHKLGAHLINGTVYGLDI 120
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
P N PY L+Y ++ GE ++L+VD VIGADGANSR+AK+I+AGDY+YAIAFQE
Sbjct: 121 PTNSTDPYTLHYADHSHGNSQ-GEMKSLKVDMVIGADGANSRIAKAIDAGDYNYAIAFQE 179
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLAT 289
R+++P +KM YYE+LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ +K IK Q
Sbjct: 180 RIRLPQDKMAYYEDLAEMYVGKDVSPDFYAWVFPKYDHVAVGTGTMKVNKAMIKDLQAGI 239
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R RA ++ GG+IIRVEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS R
Sbjct: 240 RARAAHRLEGGEIIRVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSAR 299
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
MCAE I+E + G R+ E +L+ YL++WDK Y TY VLD+LQ+VFYR++ REAFVEM
Sbjct: 300 MCAETIVEVTNGGQRIPTEDELKLYLKRWDKKYGMTYLVLDILQRVFYRTDATREAFVEM 359
Query: 410 CADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
C+D+ VQKMTFDSYLYK VVP NPL +K+ TIGSL+R NAL
Sbjct: 360 CSDKDVQKMTFDSYLYKTVVPANPLVQMKITAKTIGSLLRGNAL 403
>gi|428778562|ref|YP_007170348.1| geranylgeranyl reductase [Dactylococcopsis salina PCC 8305]
gi|428692841|gb|AFZ48991.1| geranylgeranyl reductase [Dactylococcopsis salina PCC 8305]
Length = 405
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/405 (66%), Positives = 323/405 (79%), Gaps = 5/405 (1%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAE LAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 2 LRVAVVGSGPAGSSAAEVLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSNVAVDI EYIGM RREVLD +LR RA + GA++ING +++L
Sbjct: 62 RVRKMKMISPSNVAVDINLE-NEEEYIGMCRREVLDGFLRNRAAELGANLINGTVHRLEL 120
Query: 171 PRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P+ + Y L+Y ++ DG+ VG +TL+VD VIGADGANSRVAK+I AGDY+YAIAFQ
Sbjct: 121 PQASNESYTLHYADHSDGS--AVGTAKTLQVDLVIGADGANSRVAKAIEAGDYNYAIAFQ 178
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER++IP+EKM YYE LAEMYVGDDVSPDFY WVFPK DHVAVGTGT+ +K IK Q
Sbjct: 179 ERIRIPEEKMGYYEELAEMYVGDDVSPDFYAWVFPKYDHVAVGTGTMKVNKAKIKDLQAG 238
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA ++I GG+II+VEAHPIPEHPRP R+ RVALVGDAAG VTK SGEGIYFAAKS
Sbjct: 239 IRARAAERITGGEIIKVEAHPIPEHPRPHRVRDRVALVGDAAGTVTKSSGEGIYFAAKSA 298
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+E S+NG R+ E DL+ Y+++WDK Y TY VLD+LQ+VFYRS+ +REAFVE
Sbjct: 299 RMCAETIVETSKNGQRIPTEDDLKLYIKRWDKRYGMTYLVLDLLQRVFYRSDASREAFVE 358
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MC+D+ VQ++TFDSYLYK V PGNP +K+ T+GSL+R +AL
Sbjct: 359 MCSDKDVQRLTFDSYLYKTVAPGNPWVQMKITAKTVGSLLRGHAL 403
>gi|218441184|ref|YP_002379513.1| geranylgeranyl reductase [Cyanothece sp. PCC 7424]
gi|218173912|gb|ACK72645.1| geranylgeranyl reductase [Cyanothece sp. PCC 7424]
Length = 405
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/404 (66%), Positives = 321/404 (79%), Gaps = 3/404 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 2 LRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSN+ VDI EYIGM RREVLD ++R RA K GA++ING ++D+
Sbjct: 62 RVRKMKMISPSNIEVDINLD-NQEEYIGMCRREVLDGFMRNRAAKLGANLINGTVYQLDI 120
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
P N PYVL+Y ++ + G +TL+VD VIGADGANSR+AK+I+AGDY+YAIAFQE
Sbjct: 121 PNNSTDPYVLHYADHSNGEAK-GIMKTLKVDVVIGADGANSRIAKAIDAGDYNYAIAFQE 179
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLAT 289
R+++P++KM YY +LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ +K IK Q
Sbjct: 180 RIRLPEDKMTYYNDLAEMYVGKDVSPDFYAWVFPKYDHVAVGTGTMKVNKAIIKDLQAGI 239
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R RA K+ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS R
Sbjct: 240 RTRAARKLEGGQIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSAR 299
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
MCAE IIE S G R+ E DL+ YL++WDK Y TY VLD+LQ+VFYRS+ +REAFVEM
Sbjct: 300 MCAETIIETSNAGQRIPTEDDLKLYLKRWDKKYGMTYLVLDLLQRVFYRSDASREAFVEM 359
Query: 410 CADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
C+D+ VQ++TFDSYLYK VVP NPL +K+ T+GSL+R +AL
Sbjct: 360 CSDKDVQRLTFDSYLYKTVVPANPLIQMKITAKTLGSLLRGHAL 403
>gi|209528120|ref|ZP_03276595.1| geranylgeranyl reductase [Arthrospira maxima CS-328]
gi|376001572|ref|ZP_09779436.1| Geranylgeranyl hydrogenase [Arthrospira sp. PCC 8005]
gi|423062646|ref|ZP_17051436.1| geranylgeranyl reductase [Arthrospira platensis C1]
gi|209491442|gb|EDZ91822.1| geranylgeranyl reductase [Arthrospira maxima CS-328]
gi|375330041|emb|CCE15189.1| Geranylgeranyl hydrogenase [Arthrospira sp. PCC 8005]
gi|406715981|gb|EKD11133.1| geranylgeranyl reductase [Arthrospira platensis C1]
Length = 406
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/405 (66%), Positives = 322/405 (79%), Gaps = 3/405 (0%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAV+G GPAG +AAETL K G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IID
Sbjct: 2 TLRVAVVGSGPAGSSAAETLVKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSN VDI +EYIGM RREVLD ++R+RA GA++ING K++
Sbjct: 62 RRVRKMKMISPSNREVDINLE-NENEYIGMCRREVLDGFMRDRAASLGANLINGTVHKLE 120
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
+P + +PY ++Y ++ + VG +TL+VD VIGADGANSRVAK+I+AGDY+YAIAFQ
Sbjct: 121 IPASSGEPYTIHYNDH-SSGDAVGTAKTLKVDLVIGADGANSRVAKAIDAGDYNYAIAFQ 179
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER++IP +KM YYE+ AEMYVG+DVSPDFY WVFPK DHVAVGTGT+ ++ IKK Q
Sbjct: 180 ERIRIPADKMAYYEDRAEMYVGNDVSPDFYAWVFPKYDHVAVGTGTMKVNQAMIKKLQAG 239
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA +I GGKII+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKSG
Sbjct: 240 IRARAAHRIEGGKIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSG 299
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+E S G R+ E DL+ YL++WDK Y TY VLDVLQ+VFYRS+ +REAFVE
Sbjct: 300 RMCAETIVETSNAGQRIPTEDDLKLYLKRWDKQYGMTYLVLDVLQRVFYRSDASREAFVE 359
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MC+D VQ+MTFDSYLYK VVP NPL +K+ T+GSL+R +AL
Sbjct: 360 MCSDLDVQRMTFDSYLYKTVVPANPLVQMKITAKTVGSLLRGHAL 404
>gi|409990310|ref|ZP_11273702.1| geranylgeranyl reductase [Arthrospira platensis str. Paraca]
gi|291568019|dbj|BAI90291.1| geranylgeranyl hydrogenase [Arthrospira platensis NIES-39]
gi|409938821|gb|EKN80093.1| geranylgeranyl reductase [Arthrospira platensis str. Paraca]
Length = 406
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/405 (66%), Positives = 322/405 (79%), Gaps = 3/405 (0%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAV+G GPAG +AAETL K G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IID
Sbjct: 2 TLRVAVVGSGPAGSSAAETLVKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSN VDI +EYIGM RREVLD ++R+RA GA++ING K++
Sbjct: 62 RRVRKMKMISPSNREVDINLE-NENEYIGMCRREVLDGFMRDRAASLGANLINGTVHKLE 120
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
+P + +PY ++Y ++ + VG +TL+VD VIGADGANSRVAK+I+AGDY+YAIAFQ
Sbjct: 121 IPASSGEPYTIHYNDH-SSGDAVGTAKTLKVDLVIGADGANSRVAKAIDAGDYNYAIAFQ 179
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLA 288
ER++IP +KM YYE+ AEMYVG+DVSPDFY WVFPK DHVAVGTGT+ ++ IKK Q
Sbjct: 180 ERIRIPADKMAYYEDRAEMYVGNDVSPDFYAWVFPKYDHVAVGTGTMKVNQAMIKKLQAG 239
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA +I GGKII+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKSG
Sbjct: 240 IRARAAHRIEGGKIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSG 299
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+E S G R+ E DL+ YL++WDK Y TY VLDVLQ+VFYRS+ +REAFVE
Sbjct: 300 RMCAETIVETSNAGQRIPTEDDLKLYLKRWDKQYGMTYLVLDVLQRVFYRSDASREAFVE 359
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MC+D VQ+MTFDSYLYK VVP NPL +K+ T+GSL+R +AL
Sbjct: 360 MCSDLDVQRMTFDSYLYKTVVPANPLVQMKITAKTLGSLLRGHAL 404
>gi|119492086|ref|ZP_01623539.1| Geranylgeranyl reductase [Lyngbya sp. PCC 8106]
gi|119453296|gb|EAW34461.1| Geranylgeranyl reductase [Lyngbya sp. PCC 8106]
Length = 406
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/406 (66%), Positives = 322/406 (79%), Gaps = 5/406 (1%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAV+G GPAG +AAETL K G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IID
Sbjct: 2 TLRVAVVGSGPAGSSAAETLVKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSN VDI + +EYIGM RREVLD ++R+RA K GA++ING K+D
Sbjct: 62 RRVRKMKMISPSNREVDI-NLINENEYIGMCRREVLDGFMRDRAAKLGANLINGTVYKLD 120
Query: 170 LPRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
+P + Y L+YT D ++G G +TL+VD VIGADGANSR+AK+I+AGDY+YAIAF
Sbjct: 121 IPTKKNEAYTLHYT--DHSEGNSRGTAKTLKVDLVIGADGANSRIAKAIDAGDYNYAIAF 178
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQL 287
QER++I DEKM YY++ AEMYVG+DVSPDFY WVFPK DHVAVGTGT+ ++ IK+ Q
Sbjct: 179 QERIRISDEKMAYYQDRAEMYVGNDVSPDFYAWVFPKYDHVAVGTGTMKVNQAMIKQLQA 238
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
R RA +I GGKII+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS
Sbjct: 239 GIRARAAHRIEGGKIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKS 298
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
RMCAE I+E S NG ++ E DL+ YL++WDK Y TY VLD+LQ+VFYR++ REAFV
Sbjct: 299 ARMCAETIVEMSNNGAKIPTEDDLKIYLKRWDKQYGMTYLVLDILQRVFYRTDATREAFV 358
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EMC+D VQKMTFDSYLYK VVP NPL +K+ T+GSL+R +AL
Sbjct: 359 EMCSDLDVQKMTFDSYLYKTVVPANPLVQMKITAKTLGSLLRGHAL 404
>gi|172038059|ref|YP_001804560.1| geranylgeranyl hydrogenase [Cyanothece sp. ATCC 51142]
gi|354556408|ref|ZP_08975703.1| geranylgeranyl reductase [Cyanothece sp. ATCC 51472]
gi|171699513|gb|ACB52494.1| geranylgeranyl hydrogenase [Cyanothece sp. ATCC 51142]
gi|353551620|gb|EHC21021.1| geranylgeranyl reductase [Cyanothece sp. ATCC 51472]
Length = 406
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/404 (66%), Positives = 322/404 (79%), Gaps = 3/404 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 3 LRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIIDR 62
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSN+ VDI + EYIGM RREVLD +LR+RA + GA++ING ++D+
Sbjct: 63 RVRKMKMISPSNIEVDINLD-RQDEYIGMCRREVLDGFLRDRAARLGANLINGTVYQLDI 121
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
P+ Y L+Y ++ VGEK+TL+VD VIGADGANSR+AK+I+AGDY+YAIAFQE
Sbjct: 122 PKTSNGAYTLHYADH-SNGNAVGEKKTLQVDVVIGADGANSRIAKAIDAGDYNYAIAFQE 180
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLAT 289
R+++P +KM YYE+LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ +K IK Q
Sbjct: 181 RIRLPQDKMAYYEDLAEMYVGKDVSPDFYAWVFPKYDHVAVGTGTMKVNKTLIKDLQAGI 240
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R RA ++ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS R
Sbjct: 241 RARAARRLEGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSAR 300
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
MCAE I+E S G R+ E DL+ YL++WDK Y TY VLD+LQ+VFYR++ REAFVEM
Sbjct: 301 MCAETIVEMSNAGQRIPTEEDLKVYLKRWDKQYGMTYLVLDILQRVFYRTDATREAFVEM 360
Query: 410 CADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
CAD+ VQ+MTFDSYLYK VVP NPL +K+ TIGSL+R NAL
Sbjct: 361 CADKDVQRMTFDSYLYKTVVPANPLVQMKITAKTIGSLLRGNAL 404
>gi|126655372|ref|ZP_01726811.1| Geranylgeranyl reductase [Cyanothece sp. CCY0110]
gi|126622851|gb|EAZ93556.1| Geranylgeranyl reductase [Cyanothece sp. CCY0110]
Length = 419
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/404 (66%), Positives = 322/404 (79%), Gaps = 3/404 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 16 LRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIIDR 75
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSN+ VDI + EYIGM RREVLD +LR+RA GA++ING ++D+
Sbjct: 76 RVRKMKMISPSNIEVDINLD-RQDEYIGMCRREVLDGFLRDRAASLGANLINGTVYQLDI 134
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
P+ Y L+Y ++ +GEK+TL+VD VIGADGANSR+AK+I+AGDY+YAIAFQE
Sbjct: 135 PKTSNGAYTLHYADH-SNGNALGEKKTLQVDVVIGADGANSRIAKAIDAGDYNYAIAFQE 193
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLAT 289
R+++P +KM YYE+LAEMYVG+DVSPDFY WVFPK DHVAVGTGT+ +K IK Q
Sbjct: 194 RIRLPQDKMAYYEDLAEMYVGNDVSPDFYAWVFPKYDHVAVGTGTMKVNKTLIKDLQAGI 253
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R RA ++ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS R
Sbjct: 254 RARAARRLEGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSAR 313
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
MCAE I+E S G R+ E DL+ YL++WDK Y TY VLD+LQ+VFYR++ REAFVEM
Sbjct: 314 MCAETIVEMSNAGQRIPTEDDLKVYLKRWDKQYGMTYLVLDILQRVFYRTDATREAFVEM 373
Query: 410 CADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
CAD+ VQ+MTFDSYLYK VVP NPL +K+ TIGSL+R NAL
Sbjct: 374 CADKDVQRMTFDSYLYKTVVPANPLVQMKITAKTIGSLLRGNAL 417
>gi|425457519|ref|ZP_18837222.1| Geranylgeranyl diphosphate reductase [Microcystis aeruginosa PCC
9807]
gi|389801100|emb|CCI19693.1| Geranylgeranyl diphosphate reductase [Microcystis aeruginosa PCC
9807]
Length = 405
Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust.
Identities = 271/404 (67%), Positives = 318/404 (78%), Gaps = 3/404 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 2 LRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSNV VDI EYIGM RREVLD ++RERA K GA +ING +D+
Sbjct: 62 RVRKMKMISPSNVEVDINLD-NQDEYIGMCRREVLDGFMRERAHKLGAHLINGTVYGLDI 120
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
P N PY L+Y ++ GE ++L+VD VIGADGANSR+AK+I+AGDY+YAIAFQE
Sbjct: 121 PTNSTDPYTLHYADHSHGNSQ-GEMKSLKVDVVIGADGANSRIAKAIDAGDYNYAIAFQE 179
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLAT 289
R+++P +KM YYE+LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ +K IK Q
Sbjct: 180 RIRLPQDKMAYYEDLAEMYVGKDVSPDFYAWVFPKYDHVAVGTGTMKVNKAMIKDLQAGI 239
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R RA ++ GG+IIRVEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS R
Sbjct: 240 RARAARRLEGGEIIRVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSAR 299
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
MCAE I+E + G R+ E DL+ YL++WDK Y TY VLD+LQ+VFYR++ REAFVEM
Sbjct: 300 MCAETIVEVTNGGQRIPTEDDLKLYLKRWDKKYGMTYLVLDILQRVFYRTDATREAFVEM 359
Query: 410 CADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
C+D+ VQKMTFDSYLYK VVP NPL +K+ TIGSL+R NAL
Sbjct: 360 CSDKDVQKMTFDSYLYKTVVPANPLVQMKITAKTIGSLLRGNAL 403
>gi|86604802|ref|YP_473565.1| geranylgeranyl reductase [Synechococcus sp. JA-3-3Ab]
gi|86553344|gb|ABC98302.1| geranylgeranyl reductase [Synechococcus sp. JA-3-3Ab]
Length = 406
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 273/406 (67%), Positives = 328/406 (80%), Gaps = 5/406 (1%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
+LRVAV+GGGPAG +AAE LA+ G+ETFL ERKLDN KPCGGAIPLCMV EFDLP +IID
Sbjct: 2 SLRVAVVGGGPAGASAAEVLAQAGIETFLFERKLDNAKPCGGAIPLCMVSEFDLPEEIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
RKV KMKMISPSN VDI K +EYIGM RRE+LDA+LR RA + GA +I+G M ++
Sbjct: 62 RKVRKMKMISPSNYEVDIALE-KENEYIGMCRREILDAFLRNRARQKGAELIHGKVMHLE 120
Query: 170 LPRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
+P+N PY+L+Y+++ DG+ GV R+L VD VIGADG +S+VA++I AGDY+YA+AF
Sbjct: 121 IPQNGRDPYILHYSDFSDGSNRGV--PRSLGVDLVIGADGFHSKVAEAIGAGDYNYALAF 178
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQL 287
QER+++PD+KM YYE AEMYVGDDVSPDFY WVFPKCDHVAVGTGT+ ++ I+K Q
Sbjct: 179 QERIRLPDDKMAYYEERAEMYVGDDVSPDFYAWVFPKCDHVAVGTGTMKANQAQIQKLQA 238
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
R RA ++I GG++I+VEAHPIPEHPRPRR+ GR ALVGDAAGYVTK SGEGIYFAAKS
Sbjct: 239 GIRARAAERIRGGQVIKVEAHPIPEHPRPRRVVGRAALVGDAAGYVTKSSGEGIYFAAKS 298
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GRMCAE I+E SE G R+ E DL+ YL++WD+ Y TYKVLD+LQ+VFYRSN REAFV
Sbjct: 299 GRMCAETIVETSEGGKRIPSEEDLKLYLKRWDRQYGLTYKVLDILQRVFYRSNATREAFV 358
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EMCAD VQ+MTFDSYLYK VVP NP K+ V T+GSL+R NAL
Sbjct: 359 EMCADRDVQRMTFDSYLYKTVVPMNPWVQFKITVKTLGSLLRGNAL 404
>gi|390442357|ref|ZP_10230363.1| Geranylgeranyl diphosphate reductase [Microcystis sp. T1-4]
gi|389834338|emb|CCI34489.1| Geranylgeranyl diphosphate reductase [Microcystis sp. T1-4]
Length = 405
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 270/404 (66%), Positives = 318/404 (78%), Gaps = 3/404 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 2 LRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSNV VDI EYIGM RREVLD ++RERA K GA +ING +D+
Sbjct: 62 RVRKMKMISPSNVEVDINLD-NQDEYIGMCRREVLDGFMRERAHKLGAHLINGTVYGLDI 120
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
P N PY L+Y ++ GE ++L+VD VIGADGANSR+AK+I+AGDY+YAIAFQE
Sbjct: 121 PTNSTDPYTLHYADHSNGNSQ-GEMKSLKVDVVIGADGANSRIAKAIDAGDYNYAIAFQE 179
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLAT 289
R+++P +KM YYE+LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ +K IK Q
Sbjct: 180 RIRLPQDKMAYYEDLAEMYVGKDVSPDFYAWVFPKYDHVAVGTGTMKVNKAMIKDLQAGI 239
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R RA ++ GG+IIRVEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS R
Sbjct: 240 RARAARRLEGGEIIRVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSAR 299
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
MCAE I+E + G R+ E +L+ YL++WDK Y TY VLD+LQ+VFYR++ REAFVEM
Sbjct: 300 MCAETIVEVTNGGQRIPTEDELKLYLKRWDKKYGMTYLVLDILQRVFYRTDATREAFVEM 359
Query: 410 CADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
C+D+ VQKMTFDSYLYK VVP NPL +K+ TIGSL+R NAL
Sbjct: 360 CSDKDVQKMTFDSYLYKTVVPANPLVQMKITAKTIGSLLRGNAL 403
>gi|67925014|ref|ZP_00518397.1| Geranylgeranyl reductase [Crocosphaera watsonii WH 8501]
gi|67853132|gb|EAM48508.1| Geranylgeranyl reductase [Crocosphaera watsonii WH 8501]
Length = 413
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 270/404 (66%), Positives = 322/404 (79%), Gaps = 3/404 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 10 LRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIIDR 69
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSNV VDI + EYIGM RREVLD +LR+RA GA++ING ++++
Sbjct: 70 RVRKMKMISPSNVEVDINLD-RQDEYIGMCRREVLDGFLRDRAAGLGANLINGTVYQLEI 128
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
P+ E Y L+Y ++ VGE+++LEVD VIGADGANSRVAK+I+AGDY+YAIAFQE
Sbjct: 129 PKTSEGAYTLHYADH-SNGNSVGERKSLEVDLVIGADGANSRVAKAIDAGDYNYAIAFQE 187
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLAT 289
R+++P +KM YYE+LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ +K IK Q
Sbjct: 188 RIRLPQDKMTYYEDLAEMYVGKDVSPDFYAWVFPKYDHVAVGTGTMKVNKNMIKGLQAGI 247
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R RA ++ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS R
Sbjct: 248 RARAARRLEGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSAR 307
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
MCAE I+E S G R+ E DL+ YL++WDK Y TY VLD+LQ+VFYR++ REAFVEM
Sbjct: 308 MCAETIVEMSNAGQRIPTEDDLKVYLKRWDKQYGMTYLVLDILQRVFYRTDATREAFVEM 367
Query: 410 CADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
CAD+ VQ+MTFDSYLYK VVP NPL +K+ TIGSL+R +AL
Sbjct: 368 CADKDVQRMTFDSYLYKTVVPANPLVQMKITAKTIGSLLRGHAL 411
>gi|166367743|ref|YP_001660016.1| geranylgeranyl hydrogenase [Microcystis aeruginosa NIES-843]
gi|422304945|ref|ZP_16392282.1| Geranylgeranyl diphosphate reductase [Microcystis aeruginosa PCC
9806]
gi|425443052|ref|ZP_18823284.1| Geranylgeranyl diphosphate reductase [Microcystis aeruginosa PCC
9717]
gi|425446989|ref|ZP_18826984.1| Geranylgeranyl diphosphate reductase [Microcystis aeruginosa PCC
9443]
gi|425464501|ref|ZP_18843814.1| Geranylgeranyl diphosphate reductase [Microcystis aeruginosa PCC
9809]
gi|425469529|ref|ZP_18848455.1| Geranylgeranyl diphosphate reductase [Microcystis aeruginosa PCC
9701]
gi|440753872|ref|ZP_20933074.1| geranylgeranyl reductase [Microcystis aeruginosa TAIHU98]
gi|159029278|emb|CAO90144.1| chlP [Microcystis aeruginosa PCC 7806]
gi|166090116|dbj|BAG04824.1| geranylgeranyl hydrogenase [Microcystis aeruginosa NIES-843]
gi|389715733|emb|CCH99941.1| Geranylgeranyl diphosphate reductase [Microcystis aeruginosa PCC
9717]
gi|389732580|emb|CCI03527.1| Geranylgeranyl diphosphate reductase [Microcystis aeruginosa PCC
9443]
gi|389789821|emb|CCI14231.1| Geranylgeranyl diphosphate reductase [Microcystis aeruginosa PCC
9806]
gi|389833492|emb|CCI21954.1| Geranylgeranyl diphosphate reductase [Microcystis aeruginosa PCC
9809]
gi|389880581|emb|CCI38659.1| Geranylgeranyl diphosphate reductase [Microcystis aeruginosa PCC
9701]
gi|440174078|gb|ELP53447.1| geranylgeranyl reductase [Microcystis aeruginosa TAIHU98]
Length = 405
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 270/404 (66%), Positives = 318/404 (78%), Gaps = 3/404 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 2 LRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSNV VDI EYIGM RREVLD ++RERA K GA +ING +D+
Sbjct: 62 RVRKMKMISPSNVEVDINLD-NQDEYIGMCRREVLDGFMRERAHKLGAHLINGTVYGLDI 120
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
P N PY L+Y ++ GE ++L+VD VIGADGANSR+AK+I+AGDY+YAIAFQE
Sbjct: 121 PTNSTDPYTLHYADHSHGNSQ-GEMKSLKVDVVIGADGANSRIAKAIDAGDYNYAIAFQE 179
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLAT 289
R+++P +KM YYE+LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ +K IK Q
Sbjct: 180 RIRLPQDKMAYYEDLAEMYVGKDVSPDFYAWVFPKYDHVAVGTGTMKVNKAMIKDLQAGI 239
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R RA ++ GG+IIRVEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS R
Sbjct: 240 RARAARRLEGGEIIRVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSAR 299
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
MCAE I+E + G R+ E +L+ YL++WDK Y TY VLD+LQ+VFYR++ REAFVEM
Sbjct: 300 MCAETIVEVTNGGQRIPTEDELKLYLKRWDKKYGMTYLVLDILQRVFYRTDATREAFVEM 359
Query: 410 CADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
C+D+ VQKMTFDSYLYK VVP NPL +K+ TIGSL+R NAL
Sbjct: 360 CSDKDVQKMTFDSYLYKTVVPANPLVQMKITAKTIGSLLRGNAL 403
>gi|425434881|ref|ZP_18815345.1| Geranylgeranyl diphosphate reductase [Microcystis aeruginosa PCC
9432]
gi|425459006|ref|ZP_18838492.1| Geranylgeranyl diphosphate reductase [Microcystis aeruginosa PCC
9808]
gi|389675474|emb|CCH95415.1| Geranylgeranyl diphosphate reductase [Microcystis aeruginosa PCC
9432]
gi|389823370|emb|CCI28510.1| Geranylgeranyl diphosphate reductase [Microcystis aeruginosa PCC
9808]
Length = 405
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 270/404 (66%), Positives = 318/404 (78%), Gaps = 3/404 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 2 LRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSNV VDI EYIGM RREVLD ++RERA K GA +ING +D+
Sbjct: 62 RVRKMKMISPSNVEVDINLD-NQDEYIGMCRREVLDGFMRERAHKLGAHLINGTVYGLDI 120
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
P N PY L+Y ++ GE ++L+VD VIGADGANSR+AK+I+AGDY+YAIAFQE
Sbjct: 121 PTNSTDPYTLHYADHSHGNSQ-GEMKSLKVDMVIGADGANSRIAKAIDAGDYNYAIAFQE 179
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLAT 289
R+++P +KM YYE+LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ +K IK Q
Sbjct: 180 RIRLPQDKMAYYEDLAEMYVGKDVSPDFYAWVFPKYDHVAVGTGTMKVNKAMIKDLQAGI 239
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R RA ++ GG+IIRVEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS R
Sbjct: 240 RARAARRLEGGEIIRVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSAR 299
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
MCAE I+E + G R+ E +L+ YL++WDK Y TY VLD+LQ+VFYR++ REAFVEM
Sbjct: 300 MCAETIVEVTNGGQRIPTEDELKLYLKRWDKKYGMTYLVLDILQRVFYRTDATREAFVEM 359
Query: 410 CADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
C+D+ VQKMTFDSYLYK VVP NPL +K+ TIGSL+R NAL
Sbjct: 360 CSDKDVQKMTFDSYLYKTVVPANPLVQMKITAKTIGSLLRGNAL 403
>gi|416407008|ref|ZP_11688227.1| Geranylgeranyl hydrogenase BchP [Crocosphaera watsonii WH 0003]
gi|357260941|gb|EHJ10265.1| Geranylgeranyl hydrogenase BchP [Crocosphaera watsonii WH 0003]
Length = 406
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 270/404 (66%), Positives = 322/404 (79%), Gaps = 3/404 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 3 LRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIIDR 62
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSNV VDI + EYIGM RREVLD +LR+RA GA++ING ++++
Sbjct: 63 RVRKMKMISPSNVEVDINLD-RQDEYIGMCRREVLDGFLRDRAAGLGANLINGTVYQLEI 121
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
P+ E Y L+Y ++ VGE+++LEVD VIGADGANSRVAK+I+AGDY+YAIAFQE
Sbjct: 122 PKTSEGAYTLHYADH-SNGNSVGERKSLEVDLVIGADGANSRVAKAIDAGDYNYAIAFQE 180
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLAT 289
R+++P +KM YYE+LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ +K IK Q
Sbjct: 181 RIRLPQDKMTYYEDLAEMYVGKDVSPDFYAWVFPKYDHVAVGTGTMKVNKNMIKGLQAGI 240
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R RA ++ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS R
Sbjct: 241 RARAARRLEGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSAR 300
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
MCAE I+E S G R+ E DL+ YL++WDK Y TY VLD+LQ+VFYR++ REAFVEM
Sbjct: 301 MCAETIVEMSNAGQRIPTEDDLKVYLKRWDKQYGMTYLVLDILQRVFYRTDATREAFVEM 360
Query: 410 CADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
CAD+ VQ+MTFDSYLYK VVP NPL +K+ TIGSL+R +AL
Sbjct: 361 CADKDVQRMTFDSYLYKTVVPANPLVQMKITAKTIGSLLRGHAL 404
>gi|224102913|ref|XP_002312852.1| predicted protein [Populus trichocarpa]
gi|222849260|gb|EEE86807.1| predicted protein [Populus trichocarpa]
Length = 454
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 280/471 (59%), Positives = 345/471 (73%), Gaps = 26/471 (5%)
Query: 1 MASMALKS---FTG---LRQSPQEQQHPHFIAQALPRQQKFRVSAAKTSPKLTNRNLRVA 54
MA++AL FT L+ Q QQ P+ + ++A +SP L+ R LR A
Sbjct: 1 MAALALTHNLHFTPTLPLKAIKQHQQ---------PKPKTLTITATSSSP-LSGRKLRAA 50
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTK 114
VIGGGPAG +AAE LA GVETFL ER KPCGGAIPLCM+ EF +PL +IDR VT+
Sbjct: 51 VIGGGPAGSSAAEALAAGGVETFLFERSPSTAKPCGGAIPLCMIDEFSIPLHLIDRHVTR 110
Query: 115 MKMISPSNVAVDIG-QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRN 173
MK+ISPSN+ VD G +TLK HE+I M+RREVLD++LR RA+ NGA I GL +++P
Sbjct: 111 MKIISPSNLTVDFGSKTLKSHEFIPMLRREVLDSFLRSRAQSNGAQFITGLVTDIEVPDF 170
Query: 174 FE-QPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERV 232
+PYV+++T + KR+L VD ++GADGANSRVAK INAG+Y AIAFQER+
Sbjct: 171 LSSKPYVIHHTINNC-------KRSLAVDLIVGADGANSRVAKIINAGNYRCAIAFQERI 223
Query: 233 KIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNR 292
K+PDEKM YY NLAEMYVG+DVSPDFY WVFPKCDHVAVGTGT + DIK +Q R R
Sbjct: 224 KLPDEKMEYYHNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTACARRDIKVYQRGIRER 283
Query: 293 AKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCA 352
K+KI GG++I+VEAHPIPE PRPRR+ GRVALVGDAAGYVTKCSGEGIYFAAKSGRMC
Sbjct: 284 VKEKIKGGRVIKVEAHPIPEQPRPRRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCG 343
Query: 353 EAIIEGSENGTRMIDEGDLRK-YLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCA 411
EAI++ SE G RM+ E DLR+ YL +WD Y T++ LD+LQ+VFY SN REA VE+C
Sbjct: 344 EAIVKASEGGERMVSEEDLRREYLREWDNKYVNTFRFLDLLQRVFYGSNVGREALVELCG 403
Query: 412 DEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
DEYVQ+MTFDSYLYK++ G+ +D+KL +NT GS +R + REM+ L +
Sbjct: 404 DEYVQRMTFDSYLYKKMASGDRWDDVKLVLNTFGSFMRCKVVGREMEALKL 454
>gi|86609219|ref|YP_477981.1| geranylgeranyl reductase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557761|gb|ABD02718.1| geranylgeranyl reductase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 406
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 269/406 (66%), Positives = 324/406 (79%), Gaps = 5/406 (1%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
+LRVAV+GGGPAG +AAE LA+ G+ETFL ERKLDN KPCGGAIPLCMV EFDLP IID
Sbjct: 2 SLRVAVVGGGPAGASAAEVLAQAGIETFLFERKLDNAKPCGGAIPLCMVSEFDLPEGIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
RKV KMKMISPSN VDI K +EYIGM RRE+LDA+LR RA + GA +ING M ++
Sbjct: 62 RKVRKMKMISPSNYEVDIALE-KENEYIGMCRREILDAFLRNRAHQKGAELINGKVMHLE 120
Query: 170 LPRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
+P+N PY+L+Y ++ DG++ GV R+L VD VIGADG +S+VA++I AGDY+YA+AF
Sbjct: 121 IPQNGRDPYILHYNDFSDGSRQGV--PRSLAVDVVIGADGFHSKVAEAIGAGDYNYALAF 178
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQL 287
QER+++PD+KM YY AEMYVGDDVSPDFY WVFPK +HVAVGTGT+ ++ I+K Q
Sbjct: 179 QERIRLPDDKMAYYAERAEMYVGDDVSPDFYAWVFPKSNHVAVGTGTMRANQAHIQKLQA 238
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
R RA ++I GG++I+VEAHPIPEHPRPRR+ GR ALVGDAAGYVTK SGEGIYFAAKS
Sbjct: 239 GIRARAAERIRGGQVIKVEAHPIPEHPRPRRVVGRAALVGDAAGYVTKSSGEGIYFAAKS 298
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GRMCAE I+E S G R+ E DL+ YL++WD+ Y TYKVLD+LQ+VFYRSN REAFV
Sbjct: 299 GRMCAETIVETSNGGKRIPTEEDLKLYLKRWDRQYGLTYKVLDILQRVFYRSNATREAFV 358
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EMCAD VQ+MTFDSYLYK VVP +P K+ V T+GSL+R NAL
Sbjct: 359 EMCADRDVQRMTFDSYLYKTVVPMSPWVQFKITVKTLGSLIRGNAL 404
>gi|449016879|dbj|BAM80281.1| geranylgeranyl hydrogenase [Cyanidioschyzon merolae strain 10D]
Length = 454
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 258/383 (67%), Positives = 308/383 (80%), Gaps = 3/383 (0%)
Query: 74 VETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKP 133
+ETFLIERK+DNCKPCGGAIPLCMV EF LP DIIDRKV +M M+SPS + +G+TLKP
Sbjct: 70 IETFLIERKMDNCKPCGGAIPLCMVDEFGLPPDIIDRKVRRMLMVSPSGREIPVGRTLKP 129
Query: 134 HEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLP--RNFEQPYVLYYTEYDGTKGG 191
HEYIGM RRE+LD+YLRERA + GA ++GL +++LP R+ Y + Y +YD GG
Sbjct: 130 HEYIGMTRREILDSYLRERAYELGAIRVHGLVQEVELPDPRDPRGKYRIKYADYDKIDGG 189
Query: 192 VGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVG 251
+LEVD V+GADGANSRVAK+I+AGDY YAIAFQER+KIPD+KM +YE+LAEMYVG
Sbjct: 190 RATTSSLEVDMVVGADGANSRVAKAIDAGDYSYAIAFQERIKIPDDKMAFYEDLAEMYVG 249
Query: 252 DDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIP 311
DDVSPDFY WVFPK DHV VGTGTV K +IK+++ R RA KI GGK+I+VEAHPIP
Sbjct: 250 DDVSPDFYAWVFPKYDHVGVGTGTVIDKPNIKRYKEGIRQRAAPKIAGGKVIKVEAHPIP 309
Query: 312 EHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDL 371
EHPRPRR+ GRVALVGDAAGYVTKCSGEGIYFAAKSGRMC EAI+ S NG+R+ E DL
Sbjct: 310 EHPRPRRVVGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEAIVRASLNGSRIPTEQDL 369
Query: 372 RK-YLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVP 430
R YL +D+ Y PTY VLD+LQKVFY +N AREAF E+C D+YVQ++TFDSYLYK+V
Sbjct: 370 RNGYLRPYDRQYGPTYTVLDILQKVFYTNNAAREAFCELCGDDYVQQVTFDSYLYKKVTR 429
Query: 431 GNPLEDLKLAVNTIGSLVRANAL 453
+P+ED+KL TIGSL+R +AL
Sbjct: 430 TSPVEDVKLLFRTIGSLMRGHAL 452
>gi|443658277|ref|ZP_21132095.1| geranylgeranyl reductase [Microcystis aeruginosa DIANCHI905]
gi|443332939|gb|ELS47519.1| geranylgeranyl reductase [Microcystis aeruginosa DIANCHI905]
Length = 399
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/399 (66%), Positives = 313/399 (78%), Gaps = 3/399 (0%)
Query: 56 IGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKM 115
+G GPAG +AAETLAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR+V KM
Sbjct: 1 MGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIIDRRVRKM 60
Query: 116 KMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFE 175
KMISPSNV VDI EYIGM RREVLD ++RERA K GA +ING +D+P N
Sbjct: 61 KMISPSNVEVDINLD-NQDEYIGMCRREVLDGFMRERAHKLGAHLINGTVYGLDIPTNST 119
Query: 176 QPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIP 235
PY L+Y ++ GE ++L+VD VIGADGANSR+AK+I+AGDY+YAIAFQER+++P
Sbjct: 120 DPYTLHYADHSHGNSQ-GEMKSLKVDVVIGADGANSRIAKAIDAGDYNYAIAFQERIRLP 178
Query: 236 DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLATRNRAK 294
+KM YYE+LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ +K IK Q R RA
Sbjct: 179 QDKMAYYEDLAEMYVGKDVSPDFYAWVFPKYDHVAVGTGTMKVNKAMIKDLQAGIRARAA 238
Query: 295 DKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEA 354
++ GG+IIRVEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS RMCAE
Sbjct: 239 RRLEGGEIIRVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSARMCAET 298
Query: 355 IIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEY 414
I+E + G R+ E +L+ YL++WDK Y TY VLD+LQ+VFYR++ REAFVEMC+D+
Sbjct: 299 IVEVTNGGQRIPTEDELKLYLKRWDKKYGMTYLVLDILQRVFYRTDATREAFVEMCSDKD 358
Query: 415 VQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
VQKMTFDSYLYK VVP NPL +K+ TIGSL+R NAL
Sbjct: 359 VQKMTFDSYLYKTVVPANPLVQMKITAKTIGSLLRGNAL 397
>gi|284929496|ref|YP_003422018.1| geranylgeranyl reductase [cyanobacterium UCYN-A]
gi|284809940|gb|ADB95637.1| geranylgeranyl reductase [cyanobacterium UCYN-A]
Length = 406
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 258/404 (63%), Positives = 318/404 (78%), Gaps = 3/404 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+G GPAG +AAETL K G+ET+L ER L KPCGGAIPLCMV EF+LP IIDR
Sbjct: 3 LRVAVVGSGPAGSSAAETLVKAGIETYLFERNLSYVKPCGGAIPLCMVDEFELPPTIIDR 62
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSN+ VD+ K EYIGM RRE+LD +LR+RA + GA++ING ++D
Sbjct: 63 RVRKMKMISPSNIEVDLNLDNK-DEYIGMCRREILDGFLRDRAVELGANLINGTVYQLDT 121
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
P+N + PY +YY ++ + +GEK+TL+VD +IGADGANSR+AK I+AGDY+YAIAFQE
Sbjct: 122 PQNSQDPYTIYYADHSNGQA-LGEKKTLQVDVIIGADGANSRIAKFIDAGDYNYAIAFQE 180
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLAT 289
R+++P +KM YE+LAEMYVG DVSPDFY W+FPK DHVAVGTGT+ ++ IKK Q
Sbjct: 181 RIRLPKDKMNRYEDLAEMYVGKDVSPDFYAWIFPKYDHVAVGTGTMKNNQAMIKKLQAGI 240
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R+RA ++ GG++I+VEAHPIPEHPRPRR+ RVALVGDAAG VTK SGEGIYFAAKS R
Sbjct: 241 RSRAFSRLEGGEVIKVEAHPIPEHPRPRRVVNRVALVGDAAGTVTKSSGEGIYFAAKSAR 300
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
MCAE I+E S +G + E DL+ YL++WDK Y TY VLD+LQ +FYRS+ +REAFVEM
Sbjct: 301 MCAEIIVETSNSGRTIPTEDDLKLYLKRWDKQYGTTYLVLDILQHIFYRSDASREAFVEM 360
Query: 410 CADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
CAD+ Q+MTFDSYLYK VVP NPL +KL TIGSL+R +AL
Sbjct: 361 CADKNAQRMTFDSYLYKTVVPMNPLVQMKLTAKTIGSLLRGHAL 404
>gi|33865631|ref|NP_897190.1| geranylgeranyl hydrogenase [Synechococcus sp. WH 8102]
gi|33632801|emb|CAE07612.1| geranylgeranyl hydrogenase [Synechococcus sp. WH 8102]
Length = 450
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 266/410 (64%), Positives = 318/410 (77%), Gaps = 10/410 (2%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAVIGGGP+G AAE LAK G++T+L ERKLDN KPCGGAIPLCMV EFDLP DIIDR
Sbjct: 2 LRVAVIGGGPSGSCAAEILAKAGIQTWLFERKLDNAKPCGGAIPLCMVEEFDLPDDIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKP-----HEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
KV MKMISPSN VDI L P + YIGM RREV DAYLR RA G +++NGL
Sbjct: 62 KVRNMKMISPSNREVDI--KLDPLGYDDNAYIGMCRREVFDAYLRNRAADLGTTLVNGLV 119
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
K+D N + PY L+Y +Y G G G+++TL+VD +IGADGANSRVAK+++AGDY+ A
Sbjct: 120 QKIDTGSNRQGPYTLHYADYSGG-GPTGDQKTLDVDLIIGADGANSRVAKAMDAGDYNVA 178
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD-IKK 284
IAFQER+K+P E+M YYE+LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ IK
Sbjct: 179 IAFQERIKLPAEEMTYYEDLAEMYVGTDVSPDFYAWVFPKYDHVAVGTGTMQQNQSLIKG 238
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
Q R RA ++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFA
Sbjct: 239 LQKGIRERANKRLFKGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFA 298
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRK-YLEKWDKTYWPTYKVLDVLQKVFYRSNPAR 403
AKSGRMCAEAI+E S+NGT + E ++ YL++WD+ Y TY VLD+LQ++FYR++ AR
Sbjct: 299 AKSGRMCAEAIVEISKNGTVIPTEKQIKSTYLKRWDRKYGATYAVLDILQRIFYRNDAAR 358
Query: 404 EAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EAFVEMC D VQK+TFDSYLYKRVV NP + +KL + T+GSL+R AL
Sbjct: 359 EAFVEMCDDRDVQKLTFDSYLYKRVVLMNPWQQMKLTLRTLGSLLRGEAL 408
>gi|116074694|ref|ZP_01471955.1| geranylgeranyl hydrogenase [Synechococcus sp. RS9916]
gi|116067916|gb|EAU73669.1| geranylgeranyl hydrogenase [Synechococcus sp. RS9916]
Length = 451
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/410 (64%), Positives = 319/410 (77%), Gaps = 10/410 (2%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+GGGP+G AAE LAK G++T+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 2 LRVAVVGGGPSGSCAAEILAKAGIQTWLFERKLDNAKPCGGAIPLCMVEEFDLPDEIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKP-----HEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
KV MKMISPSN VDI L P + YIGM RREV DA+LR RA G +++NGL
Sbjct: 62 KVRNMKMISPSNREVDI--KLDPLGYDDNAYIGMCRREVFDAFLRNRAADLGTTLVNGLV 119
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
K+D N + PY+L+Y +Y G G GE+++LEVD +IGADGANSRVAK+++AGDY+ A
Sbjct: 120 QKIDTGSNRQGPYILHYADYSGG-GPTGEQKSLEVDLIIGADGANSRVAKAMDAGDYNVA 178
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD-IKK 284
IAFQER+K+P E+M YYE+LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ IK
Sbjct: 179 IAFQERIKLPAEEMTYYEDLAEMYVGTDVSPDFYAWVFPKYDHVAVGTGTMQQNQSLIKG 238
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
Q R RA ++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFA
Sbjct: 239 LQKGIRERANKRLFKGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFA 298
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRK-YLEKWDKTYWPTYKVLDVLQKVFYRSNPAR 403
AKSGRMCAEAI+E S NG R+ E +++ YL++WDK Y TY VLD+LQ++FYR++ AR
Sbjct: 299 AKSGRMCAEAIVEISNNGQRIPTEKEIKSTYLKRWDKKYGATYAVLDILQRIFYRNDAAR 358
Query: 404 EAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EAFVEMC D VQK+TFDSYLYKRVV NP + +KL + T+GSL+R AL
Sbjct: 359 EAFVEMCDDMDVQKLTFDSYLYKRVVMMNPWQQIKLTLRTLGSLLRGEAL 408
>gi|317969810|ref|ZP_07971200.1| geranylgeranyl hydrogenase [Synechococcus sp. CB0205]
Length = 454
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/404 (65%), Positives = 323/404 (79%), Gaps = 3/404 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+GGGP+G AAE LAK G+ET++ ERKLDN KPCGGAIPLCMV EFDLP IIDR
Sbjct: 2 LRVAVVGGGPSGSCAAEILAKAGIETWIFERKLDNAKPCGGAIPLCMVEEFDLPESIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
KV MKMISPSN VDI +EYIGM RREV+DA++R RA + GA+++NGL K+D
Sbjct: 62 KVRNMKMISPSNREVDI-NLENENEYIGMCRREVMDAFMRNRAAELGANLVNGLVTKIDT 120
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
N + PY L Y++Y + GE ++LEVD +IGADGANSRVAK+++AGDY+ AIAFQE
Sbjct: 121 GANRQGPYTLTYSDYSEGEA-TGETKSLEVDLIIGADGANSRVAKAMDAGDYNVAIAFQE 179
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT-HKGDIKKFQLAT 289
R+K+P E+M YYE+LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ ++ IK Q
Sbjct: 180 RIKLPAEEMKYYESLAEMYVGTDVSPDFYAWVFPKYDHVAVGTGTMQENQALIKSLQEGI 239
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R RAK +++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFAAKSGR
Sbjct: 240 RERAKKRLVNGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFAAKSGR 299
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
MCAE I+E S+ G R+ E DL+KYL+KWD+ Y TYKVL++LQ VFYR++ AREAFVEM
Sbjct: 300 MCAEQIVEASQGGKRVPTEADLKKYLKKWDRQYGATYKVLEILQNVFYRNDAAREAFVEM 359
Query: 410 CADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
C D+ VQ++TFDSYLYKRVV NP + LKL + T+GS++R NAL
Sbjct: 360 CDDKDVQRLTFDSYLYKRVVAMNPWQQLKLTLLTLGSVLRGNAL 403
>gi|194476742|ref|YP_002048921.1| Geranylgeranyl reductase [Paulinella chromatophora]
gi|171191749|gb|ACB42711.1| Geranylgeranyl reductase [Paulinella chromatophora]
Length = 456
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 259/404 (64%), Positives = 316/404 (78%), Gaps = 3/404 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+GGGP+G AAE LAK G++T+L ERKLDN KPCGGAIPLCMV EFDLP IIDR
Sbjct: 2 LRVAVVGGGPSGSCAAEVLAKAGIQTWLFERKLDNAKPCGGAIPLCMVEEFDLPESIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
KV MKMISPSN VDI + EYIGM RREV+D +LR+RA GA ++NGL +D
Sbjct: 62 KVRNMKMISPSNREVDI-RLENTDEYIGMCRREVMDGFLRKRAVDLGAKLVNGLVHSIDT 120
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
+N + PY ++Y Y G G TLEVD ++GADGANSRVAK+++AGDY+ AIAFQE
Sbjct: 121 GKNRQGPYTIHYANYSAG-GSTGNIETLEVDLIVGADGANSRVAKAMDAGDYNVAIAFQE 179
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT-HKGDIKKFQLAT 289
R+++P+++M YYENLAEMYVGDDVSPDFY WVFPK DHVAVGTGT+ ++ IK Q
Sbjct: 180 RIRLPNKEMGYYENLAEMYVGDDVSPDFYAWVFPKYDHVAVGTGTMQENQALIKSLQKGI 239
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R RA ++L GK+I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFAAKSGR
Sbjct: 240 RKRASARLLDGKVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFAAKSGR 299
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
MCAE I+ S GT++ +E DL+ YL WD+ Y TYKVL++LQ +FYR++ AREAFVEM
Sbjct: 300 MCAEQILASSAGGTKIPNEKDLKVYLRNWDRKYGATYKVLELLQGIFYRNDAAREAFVEM 359
Query: 410 CADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
CAD+ VQ++TFDSYLYKRVV NP + KL + T+GS++R +AL
Sbjct: 360 CADKDVQRLTFDSYLYKRVVAMNPWQQFKLVLLTLGSVLRGSAL 403
>gi|88770652|gb|ABD51929.1| chloroplast geranylgeranyl reductase/hydrogenase [Guillardia theta]
gi|428186171|gb|EKX55022.1| hypothetical protein GUITHDRAFT_91519 [Guillardia theta CCMP2712]
Length = 483
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/416 (63%), Positives = 326/416 (78%), Gaps = 7/416 (1%)
Query: 48 NRNLRVAVIGGGPAGGAAAETLAKN-GVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLD 106
+R +RVA++GGGP+G AAE A+ ++T++ ERK+DN KPCGGAIPLCM+ EF +P +
Sbjct: 55 DRKMRVAIVGGGPSGSCAAEIFAQEPNIDTYIFERKMDNAKPCGGAIPLCMIEEFQIPEE 114
Query: 107 IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFM 166
++DRKV KM MISP+ IGQTL+ EYIGM RRE+LD +LR+RA K GA INGL
Sbjct: 115 VVDRKVRKMLMISPTGKEAPIGQTLRDDEYIGMTRREILDGFLRDRAIKLGAKPINGLVT 174
Query: 167 KMDLPR-NFE-QPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDY 224
+DLP N E +PY ++YT Y+G K VG L+VD +IGADGANSRVAK+I+AG+Y+Y
Sbjct: 175 GIDLPEGNSETKPYKIHYTNYNGQK--VGTPEELDVDLIIGADGANSRVAKAIDAGEYNY 232
Query: 225 AIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKK 284
AIAFQER++I D++M +YE LAEMYVGDDVSPDFYGWVFPK DHV VGTGTV ++ IK+
Sbjct: 233 AIAFQERIRINDQQMAFYEELAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPAIKQ 292
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
+Q A R RA KI GGKII+VEAHPIPEH RP+R+ R ALVGDAAGYVTKCSGEGIYFA
Sbjct: 293 YQNAIRERAGKKIEGGKIIKVEAHPIPEHYRPKRVLNRAALVGDAAGYVTKCSGEGIYFA 352
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLR-KYLEKWDKTYWPTYKVLDVLQKVFYRSNPAR 403
AKSGRM AEAI + ++ GT + + ++ YL ++D+ Y PTY VLDVLQ+VFYRSNPAR
Sbjct: 353 AKSGRMAAEAITKLTQGGTVLPTQEEIEDTYLRRYDQLYGPTYAVLDVLQQVFYRSNPAR 412
Query: 404 EAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDK 459
EAFVEMC EYVQK+TFDSYLYK+V G P+EDLKL NT+ SLV+ N LR ++ K
Sbjct: 413 EAFVEMCESEYVQKVTFDSYLYKKVTSGGPVEDLKLLFNTVRSLVKQN-LRSDIPK 467
>gi|33861317|ref|NP_892878.1| aromatic-ring hydroxylase (flavoprotein monooxygenase)
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|33633894|emb|CAE19219.1| Aromatic-ring hydroxylase (flavoprotein monooxygenase)
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
Length = 443
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 265/411 (64%), Positives = 323/411 (78%), Gaps = 12/411 (2%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAVIGGGP+G AAE LAK+G++T+L ERKLDN KPCGGAIPLCMV EFDLP IIDR
Sbjct: 2 LRVAVIGGGPSGSCAAEILAKSGIKTWLFERKLDNAKPCGGAIPLCMVEEFDLPETIIDR 61
Query: 111 KVTKMKMISPSNVAVDI------GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
KV MKMISPSN VDI G++ +EYIGM RREV+DA++R RA + GA++INGL
Sbjct: 62 KVRHMKMISPSNREVDISLDNVYGKS--DNEYIGMCRREVMDAFMRNRASELGATLINGL 119
Query: 165 FMKMDLPRNFEQPYVLYYTEYD-GTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYD 223
+D + + PY L Y+++ G K G E + L VD +IGADGANSRVAK+++AGDY
Sbjct: 120 VTSIDTGNDNQGPYKLSYSDFSSGDKKG--ELKELTVDLLIGADGANSRVAKAMDAGDYK 177
Query: 224 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT-HKGDI 282
AIAFQER+K+P E+M YYE+LAEMYVG DVSPDFYGWVFPK DHVAVGTGT+ ++ I
Sbjct: 178 VAIAFQERIKLPKEEMSYYEDLAEMYVGTDVSPDFYGWVFPKYDHVAVGTGTMQKNQSLI 237
Query: 283 KKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIY 342
K Q RNRAK +++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIY
Sbjct: 238 KGLQEGVRNRAKKRLVNGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIY 297
Query: 343 FAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPA 402
FAAKSGRMCAE I+E S+NG + E DL+ YL+KWDK Y TYKVL++LQ +FYR++ A
Sbjct: 298 FAAKSGRMCAEEIVEASKNGQEIPSEKDLKNYLKKWDKKYGTTYKVLEILQNIFYRNDSA 357
Query: 403 REAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
REAFVEMC D VQ++TFDSYLYKRVV PL+ +KL + T+GS++R AL
Sbjct: 358 REAFVEMCDDMDVQRLTFDSYLYKRVVAMKPLQQIKLTMLTLGSILRGKAL 408
>gi|260435236|ref|ZP_05789206.1| geranylgeranyl reductase [Synechococcus sp. WH 8109]
gi|260413110|gb|EEX06406.1| geranylgeranyl reductase [Synechococcus sp. WH 8109]
Length = 460
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 264/410 (64%), Positives = 316/410 (77%), Gaps = 10/410 (2%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAVIGGGP+G AAE LAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 2 LRVAVIGGGPSGSCAAEILAKAGIETWLFERKLDNAKPCGGAIPLCMVEEFDLPDEIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKP-----HEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
KV MKMISPSN VDI L P + YIGM RREV DA+LR RA G ++INGL
Sbjct: 62 KVRNMKMISPSNREVDI--KLDPLGYDENAYIGMCRREVFDAFLRNRAADLGTTLINGLV 119
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
K+D + + PY ++Y +Y G G GE++TL VD +IGADGANSRVAK+++AGDY+ A
Sbjct: 120 QKIDTGTDRQGPYTIHYADYSGG-GPTGEQKTLAVDLIIGADGANSRVAKAMDAGDYNVA 178
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD-IKK 284
IAFQER+K+P E+M YYE+LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ IK
Sbjct: 179 IAFQERIKLPAEEMTYYEDLAEMYVGTDVSPDFYAWVFPKYDHVAVGTGTMQQNQSLIKG 238
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
Q R RA ++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFA
Sbjct: 239 LQRGIRERANKRLFQGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFA 298
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRK-YLEKWDKTYWPTYKVLDVLQKVFYRSNPAR 403
AKSGRMCAEAI+E S NG + E ++ YL++WD+ Y TY VLD+LQ++FYR++ AR
Sbjct: 299 AKSGRMCAEAIVEISNNGASIPTEKQIKSTYLKRWDRKYGATYAVLDILQRIFYRNDAAR 358
Query: 404 EAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EAFVEMC D+ VQK+TFDSYLYKRVV NP + +KL + T+GSL+R AL
Sbjct: 359 EAFVEMCDDKDVQKLTFDSYLYKRVVMMNPWQQIKLTLRTLGSLIRGEAL 408
>gi|224132246|ref|XP_002328221.1| predicted protein [Populus trichocarpa]
gi|224147708|ref|XP_002336528.1| predicted protein [Populus trichocarpa]
gi|222835866|gb|EEE74287.1| predicted protein [Populus trichocarpa]
gi|222837736|gb|EEE76101.1| predicted protein [Populus trichocarpa]
Length = 451
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 268/436 (61%), Positives = 333/436 (76%), Gaps = 10/436 (2%)
Query: 30 PRQQKFRVSAAKTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPC 89
P Q+ + T+ ++ R LR AVIGGGPAG +AAE LA GVETFL ER KPC
Sbjct: 23 PHQKPKPHNLTITATSISGRKLRAAVIGGGPAGSSAAEALAAGGVETFLFERSPSTAKPC 82
Query: 90 GGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG-QTLKPHEYIGMVRREVLDAY 148
GGAIPLCM+ EF +PL ++DR VT+MK+ISPSN+ VD G +TLK HE+I M+RREVLD++
Sbjct: 83 GGAIPLCMIDEFSIPLHLVDRHVTRMKIISPSNLTVDFGSRTLKSHEFIPMLRREVLDSF 142
Query: 149 LRERAEKNGASVINGLFMKMDLPRNFE-QPYVLYYTEYDGTKGGVGEKRTLEVDAVIGAD 207
LR RA+ NGA I GL +++P F +PYV+++T + K++L VD ++GAD
Sbjct: 143 LRSRAQSNGAHFITGLVTDIEVPDFFSSKPYVIHHTINN-------RKQSLAVDLIVGAD 195
Query: 208 GANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCD 267
GANSRVAK I+AG+Y AIAFQER+K+PDEKM YY +LAEMYVG+DVSPDFY WVFPKCD
Sbjct: 196 GANSRVAKIIDAGNYSCAIAFQERIKLPDEKMEYYHDLAEMYVGNDVSPDFYAWVFPKCD 255
Query: 268 HVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVG 327
HVAVGTGTV + +IK +Q R R ++KI GGK+I+VEAHPIPEHPRPRR+ GRVALVG
Sbjct: 256 HVAVGTGTVCARQNIKVYQRGIRERVREKIKGGKVIKVEAHPIPEHPRPRRVRGRVALVG 315
Query: 328 DAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDL-RKYLEKWDKTYWPTY 386
DAAGYVTKCSGEGIYFAAKSGRMC EAI++ SE G +MI E DL R+YL +WD+ Y T+
Sbjct: 316 DAAGYVTKCSGEGIYFAAKSGRMCGEAIVKASEGGEKMISEEDLKREYLREWDRKYVNTF 375
Query: 387 KVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGS 446
+ LD+LQKVFY S+ REA VE+C DEYVQ+MTFDSYLYK++ G+ D+KL +NT GS
Sbjct: 376 RFLDLLQKVFYGSDVGREALVELCGDEYVQRMTFDSYLYKKLATGDRWGDVKLVLNTFGS 435
Query: 447 LVRANALRREMDKLTI 462
L+R L REM+ L +
Sbjct: 436 LMRCKVLGREMEALKL 451
>gi|57335865|emb|CAH25334.1| geranylgeranyl reductase [Guillardia theta]
Length = 428
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 264/415 (63%), Positives = 325/415 (78%), Gaps = 7/415 (1%)
Query: 49 RNLRVAVIGGGPAGGAAAETLAKN-GVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDI 107
R +RVA++GGGP+G AAE A+ ++T++ ERK+DN KPCGGAIPLCM+ EF +P ++
Sbjct: 1 RKMRVAIVGGGPSGSCAAEIFAQEPNIDTYIFERKMDNAKPCGGAIPLCMIEEFQIPEEV 60
Query: 108 IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK 167
+DRKV KM MISP+ IGQTL+ EYIGM RRE+LD +LR+RA K GA INGL
Sbjct: 61 VDRKVRKMLMISPTGKEAPIGQTLRDDEYIGMTRREILDGFLRDRAIKLGAKPINGLVTG 120
Query: 168 MDLPR-NFE-QPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
+DLP N E +PY ++YT Y+G K VG L+VD +IGADGANSRVAK+I+AG+Y+YA
Sbjct: 121 IDLPEGNSETKPYKIHYTNYNGQK--VGTPEELDVDLIIGADGANSRVAKAIDAGEYNYA 178
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKF 285
IAFQER++I D++M +YE LAEMYVGDDVSPDFYGWVFPK DHV VGTGTV ++ IK++
Sbjct: 179 IAFQERIRINDQQMAFYEELAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPAIKQY 238
Query: 286 QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAA 345
Q A R RA KI GGKII+VEAHPIPEH RP+R+ R ALVGDAAGYVTKCSGEGIYFAA
Sbjct: 239 QNAIRERAGKKIEGGKIIKVEAHPIPEHYRPKRVLNRAALVGDAAGYVTKCSGEGIYFAA 298
Query: 346 KSGRMCAEAIIEGSENGTRMIDEGDLR-KYLEKWDKTYWPTYKVLDVLQKVFYRSNPARE 404
KSGRM AEAI + ++ GT + + ++ YL ++D+ Y PTY VLDVLQ+VFYRSNPARE
Sbjct: 299 KSGRMAAEAITKLTQGGTVLPTQEEIEDTYLRRYDQLYGPTYAVLDVLQQVFYRSNPARE 358
Query: 405 AFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDK 459
AFVEMC EYVQK+TFDSYLYK+V G P+EDLKL NT+ SLV+ N LR ++ K
Sbjct: 359 AFVEMCESEYVQKVTFDSYLYKKVTSGGPVEDLKLLFNTVRSLVKQN-LRSDIPK 412
>gi|88808504|ref|ZP_01124014.1| geranylgeranyl hydrogenase [Synechococcus sp. WH 7805]
gi|88787492|gb|EAR18649.1| geranylgeranyl hydrogenase [Synechococcus sp. WH 7805]
Length = 457
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/410 (64%), Positives = 317/410 (77%), Gaps = 10/410 (2%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+GGGP+G AAE LAK G+ T+L ERKLDN KPCGGAIPLCMV EFDLP IIDR
Sbjct: 2 LRVAVVGGGPSGSCAAEILAKAGISTWLFERKLDNAKPCGGAIPLCMVEEFDLPESIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKP-----HEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
KV MKMISPSN VDI L P + YIGM RREV DA++R RA + G ++INGL
Sbjct: 62 KVRNMKMISPSNKEVDI--QLDPLGYDDNAYIGMCRREVFDAFMRNRAAELGTTLINGLV 119
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
K+D + PY L+Y +Y + G GE +TLEVD +IGADGANSRVAK+++AGDY+ A
Sbjct: 120 QKIDTGSARQGPYTLHYADYS-SGGPTGELKTLEVDLIIGADGANSRVAKAMDAGDYNVA 178
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD-IKK 284
IAFQER+K+P E+M YYE+LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ IK
Sbjct: 179 IAFQERIKLPPEEMTYYEDLAEMYVGTDVSPDFYAWVFPKYDHVAVGTGTMQQNQSLIKG 238
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
Q R RA+ ++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFA
Sbjct: 239 LQKGIRERARKRLFKGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFA 298
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRK-YLEKWDKTYWPTYKVLDVLQKVFYRSNPAR 403
AKSGRMCAEAI+E S NG+R+ E +++ YL++WD+ Y TY VLD+LQ++FYR++ AR
Sbjct: 299 AKSGRMCAEAIVEISANGSRVPTEKEIKSTYLKRWDRKYGATYAVLDILQRIFYRNDAAR 358
Query: 404 EAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EAFVEMC D VQK+TFDSYLYKRVV NP + +KL + T+GSL+R AL
Sbjct: 359 EAFVEMCDDRDVQKLTFDSYLYKRVVMMNPWQQVKLTLRTLGSLLRGEAL 408
>gi|78212771|ref|YP_381550.1| geranylgeranyl reductase [Synechococcus sp. CC9605]
gi|78197230|gb|ABB34995.1| geranylgeranyl reductase [Synechococcus sp. CC9605]
Length = 455
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 264/410 (64%), Positives = 316/410 (77%), Gaps = 10/410 (2%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
L+VAVIGGGP+G AAE LAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 2 LQVAVIGGGPSGSCAAEILAKAGIETWLFERKLDNAKPCGGAIPLCMVEEFDLPDEIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKP-----HEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
KV MKMISPSN VDI L P + YIGM RREV DA+LR RA G ++INGL
Sbjct: 62 KVRNMKMISPSNREVDI--KLDPLGYDENAYIGMCRREVFDAFLRNRAADLGTTLINGLV 119
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
K+D + + PY ++Y +Y G G GE++TL VD +IGADGANSRVAK+++AGDY+ A
Sbjct: 120 QKIDTGADRQGPYTIHYADYSGG-GPTGEQKTLAVDLIIGADGANSRVAKAMDAGDYNVA 178
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD-IKK 284
IAFQER+K+P E+M YYENLAEMYVG DVSPDFY WVFPK DHVAVGTGT+ IK
Sbjct: 179 IAFQERIKLPAEEMTYYENLAEMYVGTDVSPDFYAWVFPKYDHVAVGTGTMQQNQSLIKG 238
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
Q R RA ++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFA
Sbjct: 239 LQRGIRERANKRLFQGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFA 298
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRK-YLEKWDKTYWPTYKVLDVLQKVFYRSNPAR 403
AKSGRMCAEAI+E S NG + E ++ YL++WD+ Y TY VLD+LQ++FYR++ AR
Sbjct: 299 AKSGRMCAEAIVEISNNGASIPTEKQIKSTYLKRWDRKYGATYVVLDILQRIFYRNDAAR 358
Query: 404 EAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EAFVEMC D+ VQK+TFDSYLYKRVV NP + +KL + T+GSL+R AL
Sbjct: 359 EAFVEMCDDKDVQKLTFDSYLYKRVVMMNPWQQIKLTLRTLGSLIRGEAL 408
>gi|91070297|gb|ABE11215.1| aromatic-ring hydroxylase [uncultured Prochlorococcus marinus clone
HF10-88D1]
Length = 446
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/409 (64%), Positives = 318/409 (77%), Gaps = 8/409 (1%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAVIGGGP+G AAE LAK G++T+L ERKLDN KPCGGAIPLCMV EFDLP IIDR
Sbjct: 2 LRVAVIGGGPSGSCAAEILAKAGIKTWLFERKLDNAKPCGGAIPLCMVEEFDLPESIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTL----KPHEYIGMVRREVLDAYLRERAEKNGASVINGLFM 166
KV M+MISPSN VDI +E+IGM RREV+DA++R RA GA++INGL
Sbjct: 62 KVRHMRMISPSNREVDISLDRVYGKSDNEFIGMCRREVMDAFMRNRASDLGATLINGLVT 121
Query: 167 KMDLPRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
+D N + PY L Y+++ +G K G E + L VD +IGADGANSRVAK+++AGDY A
Sbjct: 122 SIDTGDNKQGPYKLSYSDFTNGDKKG--ELKELTVDLLIGADGANSRVAKAMDAGDYKVA 179
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT-HKGDIKK 284
IAFQER+K+P E+M YYE+LAEMYVG DVSPDFYGWVFPK DHVAVGTGT+ ++ IK
Sbjct: 180 IAFQERIKLPKEEMSYYEDLAEMYVGTDVSPDFYGWVFPKYDHVAVGTGTMQKNQSLIKG 239
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
Q RNRAK +++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFA
Sbjct: 240 LQEGVRNRAKKRLVNGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFA 299
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPARE 404
AKSGRMCAE I+E S NG + E DL+ YL+KWDK Y TYKVL++LQ +FYR++ ARE
Sbjct: 300 AKSGRMCAEEIVEASRNGQVIPSEKDLKNYLKKWDKKYGTTYKVLEILQNIFYRNDSARE 359
Query: 405 AFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
AFVEMC D VQ++TFDSYLYKRVV PL+ LK+ + T+GS++R AL
Sbjct: 360 AFVEMCDDMDVQRLTFDSYLYKRVVSMKPLQQLKITMLTLGSILRGKAL 408
>gi|148239653|ref|YP_001225040.1| geranylgeranyl hydrogenase ChlP [Synechococcus sp. WH 7803]
gi|147848192|emb|CAK23743.1| Geranylgeranyl hydrogenase ChlP [Synechococcus sp. WH 7803]
Length = 457
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 262/410 (63%), Positives = 316/410 (77%), Gaps = 10/410 (2%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+GGGP+G AAE LAK G+ T+L ERKLDN KPCGGAIPLCMV EFDLP IIDR
Sbjct: 2 LRVAVVGGGPSGSCAAEILAKAGISTWLFERKLDNAKPCGGAIPLCMVEEFDLPESIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKP-----HEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
KV MKMISPSN VDI L P + YIGM RREV DA++R RA G +++NGL
Sbjct: 62 KVRNMKMISPSNKEVDI--KLDPLGYDDNAYIGMCRREVFDAFMRNRAADLGTTLVNGLV 119
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
K+D + PY L+Y +Y + G GE +TLEVD +IGADGANSRVAK+++AGDY+ A
Sbjct: 120 QKIDTGNARQGPYTLHYADYS-SGGPTGELKTLEVDLIIGADGANSRVAKAMDAGDYNVA 178
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD-IKK 284
IAFQER+K+P E+M YYE+LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ IK
Sbjct: 179 IAFQERIKLPPEEMTYYEDLAEMYVGTDVSPDFYAWVFPKYDHVAVGTGTMQQNQSLIKG 238
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
Q R RA+ ++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFA
Sbjct: 239 LQKGIRERARKRLFKGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFA 298
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRK-YLEKWDKTYWPTYKVLDVLQKVFYRSNPAR 403
AKSGRMCAEAI+E S NG+R+ E +++ YL++WD+ Y TY VLD+LQ++FYR++ AR
Sbjct: 299 AKSGRMCAEAIVEISANGSRVPTEKEIKSTYLKRWDRKYGATYAVLDILQRIFYRNDAAR 358
Query: 404 EAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EAFVEMC D VQK+TFDSYLYKRVV NP + +KL + T+GSL+R AL
Sbjct: 359 EAFVEMCDDRDVQKLTFDSYLYKRVVLMNPWQQIKLTLRTLGSLLRGEAL 408
>gi|123968355|ref|YP_001009213.1| aromatic-ring hydroxylase (flavoprotein monooxygenase)
[Prochlorococcus marinus str. AS9601]
gi|123198465|gb|ABM70106.1| Aromatic-ring hydroxylase (flavoprotein monooxygenase)
[Prochlorococcus marinus str. AS9601]
Length = 446
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/409 (64%), Positives = 319/409 (77%), Gaps = 8/409 (1%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAVIGGGP+G AAE LAK G++T+L ERKLDN KPCGGAIPLCMV EFDLP IIDR
Sbjct: 2 LRVAVIGGGPSGSCAAEILAKAGIKTWLFERKLDNAKPCGGAIPLCMVEEFDLPESIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTL----KPHEYIGMVRREVLDAYLRERAEKNGASVINGLFM 166
KV M+MISPSN VDI +E+IGM RREV+DA++R RA GA++INGL
Sbjct: 62 KVRHMRMISPSNREVDISLDRVYGKSDNEFIGMCRREVMDAFMRNRASDLGATLINGLVT 121
Query: 167 KMDLPRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
+D N + PY L Y+++ +G K G E + L VD +IGADGANSRVAK+++AGDY A
Sbjct: 122 SIDTGDNNQGPYKLSYSDFTNGDKKG--ELKELTVDLLIGADGANSRVAKAMDAGDYKVA 179
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT-HKGDIKK 284
IAFQER+K+P E+M YYE+LAEMYVG DVSPDFYGWVFPK DHVAVGTGT+ ++ IK
Sbjct: 180 IAFQERIKLPKEEMGYYEDLAEMYVGTDVSPDFYGWVFPKYDHVAVGTGTMQKNQSLIKG 239
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
Q RNRAK +++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFA
Sbjct: 240 LQEGVRNRAKKRLVNGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFA 299
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPARE 404
AKSGRMCAE I+E S+NG + E DL+ YL+KWDK Y TYKVL++LQ +FYR++ ARE
Sbjct: 300 AKSGRMCAEEIVEASKNGQVIPSEKDLKNYLKKWDKKYGTTYKVLEILQNIFYRNDSARE 359
Query: 405 AFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
AFVEMC D VQ++TFDSYLYKRVV PL+ LK+ + T+GS++R AL
Sbjct: 360 AFVEMCDDMDVQRLTFDSYLYKRVVSMKPLQQLKITMLTLGSILRGKAL 408
>gi|427701817|ref|YP_007045039.1| geranylgeranyl reductase [Cyanobium gracile PCC 6307]
gi|427344985|gb|AFY27698.1| geranylgeranyl reductase [Cyanobium gracile PCC 6307]
Length = 461
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 257/404 (63%), Positives = 315/404 (77%), Gaps = 3/404 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+GGGP+G AAE LAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP IIDR
Sbjct: 2 LRVAVVGGGPSGSCAAEVLAKAGIETWLFERKLDNAKPCGGAIPLCMVEEFDLPESIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
KV M+MISPSN VDI +EYIGM RREVLD +LR RA + GA ++NGL +D
Sbjct: 62 KVRNMRMISPSNREVDI-HLENSNEYIGMCRREVLDGFLRNRAAELGAHLVNGLVQSIDT 120
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
+ PY L+Y +Y + G GE +TLEVD ++GADGANSRVAK+++AGDY+ AIAFQE
Sbjct: 121 GNQRQGPYTLHYADYS-SGGPTGELKTLEVDLIVGADGANSRVAKAMDAGDYNVAIAFQE 179
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLAT 289
R+++P E+M YYE+LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ ++ IK Q
Sbjct: 180 RIRLPAEEMAYYEDLAEMYVGTDVSPDFYAWVFPKYDHVAVGTGTMQANQSLIKGLQKGI 239
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R RA ++L G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFAAKSGR
Sbjct: 240 RERASRRLLRGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFAAKSGR 299
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
MCAE I+ S +G+R+ E DL+ Y+ KWD+ Y TYKVL++LQ +FY ++ AREAFVEM
Sbjct: 300 MCAEEIVAASASGSRIPTEKDLKVYIRKWDRKYGATYKVLELLQNIFYSNDAAREAFVEM 359
Query: 410 CADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
C D+ VQ++TFDSYLYKRVV NP + +KL V T+G+++R AL
Sbjct: 360 CDDKDVQRLTFDSYLYKRVVAMNPWQQIKLTVLTLGAVLRGQAL 403
>gi|78779152|ref|YP_397264.1| aromatic-ring hydroxylase (flavoprotein monooxygenase)
[Prochlorococcus marinus str. MIT 9312]
gi|78712651|gb|ABB49828.1| geranylgeranyl reductase [Prochlorococcus marinus str. MIT 9312]
Length = 446
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/411 (63%), Positives = 321/411 (78%), Gaps = 12/411 (2%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAVIGGGP+G AAE LAK G++T+L ERKLDN KPCGGAIPLCMV EFDLP IIDR
Sbjct: 2 LRVAVIGGGPSGSCAAEILAKAGIKTWLFERKLDNAKPCGGAIPLCMVEEFDLPESIIDR 61
Query: 111 KVTKMKMISPSNVAVDI------GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
KV M+MISPSN VDI G++ +E+IGM RREV+DA++R RA GA++INGL
Sbjct: 62 KVRHMRMISPSNREVDISLDKVYGKS--DNEFIGMCRREVMDAFMRNRASDLGATLINGL 119
Query: 165 FMKMDLPRNFEQPYVLYYTEYD-GTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYD 223
+D N + PY L Y++Y G K G E + L VD +IGADGANSRVAK+++AGDY
Sbjct: 120 VTSIDTGNNNQGPYKLVYSDYSSGDKKG--ELKELTVDLLIGADGANSRVAKAMDAGDYK 177
Query: 224 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT-HKGDI 282
AIAFQER+K+P E+M YYE+LAEMYVG DVSPDFYGWVFPK DHVAVGTGT+ ++ I
Sbjct: 178 VAIAFQERIKLPKEEMSYYEDLAEMYVGTDVSPDFYGWVFPKYDHVAVGTGTMQKNQLLI 237
Query: 283 KKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIY 342
K Q RNRAK +++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIY
Sbjct: 238 KGLQEGVRNRAKKRLVNGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIY 297
Query: 343 FAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPA 402
FAAKSGRMCAE I+E S+NG + E DL+ YL+KWDK Y TYKVL++LQ +FYR++ A
Sbjct: 298 FAAKSGRMCAEEIVEASKNGEVIPSENDLKNYLKKWDKKYGATYKVLEILQNIFYRNDSA 357
Query: 403 REAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
REAFVEMC D VQ++TFDSYLYK+VV P++ +KL + T+GS++R AL
Sbjct: 358 REAFVEMCDDMDVQRLTFDSYLYKKVVAMKPIQQIKLTLLTLGSILRGKAL 408
>gi|113953174|ref|YP_730490.1| geranylgeranyl reductase [Synechococcus sp. CC9311]
gi|113880525|gb|ABI45483.1| geranylgeranyl reductase [Synechococcus sp. CC9311]
Length = 462
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 261/410 (63%), Positives = 316/410 (77%), Gaps = 10/410 (2%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+GGGP+G AAE LA+ G++T+L ERKLDN KPCGGAIPLCMV EFDLP IIDR
Sbjct: 2 LRVAVVGGGPSGSCAAEVLARAGIKTWLFERKLDNAKPCGGAIPLCMVEEFDLPDSIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKP-----HEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
KV MKMISPSN VDI L P + YIGM RREV D++LR RA G ++INGL
Sbjct: 62 KVRNMKMISPSNREVDI--KLDPLGYDDNAYIGMCRREVFDSFLRNRAADLGTTLINGLV 119
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
K+D + PY L+Y +Y G GE ++LEVD +IGADGANSRVAK+++AGDY A
Sbjct: 120 QKIDTGNKRQGPYTLHYADYSAG-GPTGEMKSLEVDLIIGADGANSRVAKAMDAGDYKVA 178
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD-IKK 284
IAFQER+K+P E+M YYE+LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ IK
Sbjct: 179 IAFQERIKLPAEEMAYYEDLAEMYVGTDVSPDFYAWVFPKYDHVAVGTGTMQQNQSLIKG 238
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
Q R RA+ ++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFA
Sbjct: 239 LQKGIRERARKRLFKGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFA 298
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRK-YLEKWDKTYWPTYKVLDVLQKVFYRSNPAR 403
AKSGRMCAEAI+E S+NGT+M E +++ YL++WD+ Y TY VLD+LQ++FYR++ AR
Sbjct: 299 AKSGRMCAEAIVEISKNGTQMPTEKEIKNTYLKRWDRKYGATYIVLDILQRIFYRTDAAR 358
Query: 404 EAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EAFVEMC D+ VQK+TFDSYLYK+VV NP + +KL T+GSL+R AL
Sbjct: 359 EAFVEMCDDQDVQKLTFDSYLYKKVVMMNPWQQVKLTARTLGSLLRGQAL 408
>gi|78184812|ref|YP_377247.1| geranylgeranyl reductase [Synechococcus sp. CC9902]
gi|78169106|gb|ABB26203.1| Geranylgeranyl reductase [Synechococcus sp. CC9902]
Length = 452
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 262/410 (63%), Positives = 316/410 (77%), Gaps = 10/410 (2%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAVIGGGP+G AAE LAK G+ET+L ERKLDN KPCGGAIPLCMV EF+LP IIDR
Sbjct: 2 LRVAVIGGGPSGSCAAEILAKAGIETWLFERKLDNAKPCGGAIPLCMVEEFNLPDSIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKP-----HEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
KV MKMISPSN VDI L P + YIGM RREV DA+LR RA G ++INGL
Sbjct: 62 KVRNMKMISPSNREVDI--QLDPLGYDENAYIGMCRREVFDAFLRNRAADLGTTLINGLV 119
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
K+D +N + PY ++Y +Y G G GE +TL+VD ++GADGANSRVAK+++AGDY+ A
Sbjct: 120 QKIDTGKNRQGPYCIHYADYSGG-GPTGEPKTLDVDLIVGADGANSRVAKAMDAGDYNVA 178
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD-IKK 284
IAFQER+K+P E+M YYE+LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ IK
Sbjct: 179 IAFQERIKLPPEEMTYYEDLAEMYVGTDVSPDFYAWVFPKYDHVAVGTGTMQQNQSLIKG 238
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
Q R RA ++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFA
Sbjct: 239 LQKGIRERATKRLFKGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFA 298
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRK-YLEKWDKTYWPTYKVLDVLQKVFYRSNPAR 403
AKSGRMCAEAI+E S NG + E ++ YL++WD+ Y TY VLD+LQ++FYR++ AR
Sbjct: 299 AKSGRMCAEAIVEISNNGANVPTEKQIKSTYLKRWDRKYGATYAVLDILQRIFYRNDAAR 358
Query: 404 EAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EAFVEMC D+ VQ++TFDSYLYKRVV NP + +KL + T+GSL+R AL
Sbjct: 359 EAFVEMCDDKDVQRLTFDSYLYKRVVLMNPWQQVKLTLRTLGSLLRGEAL 408
>gi|352093825|ref|ZP_08954996.1| geranylgeranyl reductase [Synechococcus sp. WH 8016]
gi|351680165|gb|EHA63297.1| geranylgeranyl reductase [Synechococcus sp. WH 8016]
Length = 462
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 260/410 (63%), Positives = 318/410 (77%), Gaps = 10/410 (2%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+GGGP+G AAE LA+ G++T+L ERKLDN KPCGGAIPLCMV EFDLP IIDR
Sbjct: 2 LRVAVVGGGPSGSCAAEVLARAGIKTWLFERKLDNAKPCGGAIPLCMVEEFDLPDSIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKP-----HEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
KV MKMISPSN VDI L P + YIGM RREV D++LR RA G ++INGL
Sbjct: 62 KVRNMKMISPSNREVDI--KLDPLGYDDNAYIGMCRREVFDSFLRNRAADLGTTLINGLV 119
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
K+D N + PY L+Y +Y + G G+ ++L+VD +IGADGANSRVAK+++AGDY A
Sbjct: 120 QKIDTGDNRQGPYTLHYADY-SSGGPTGDMKSLDVDLIIGADGANSRVAKAMDAGDYKVA 178
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD-IKK 284
IAFQER+K+P E+M YYE+LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ IK
Sbjct: 179 IAFQERIKLPAEEMAYYEDLAEMYVGTDVSPDFYAWVFPKYDHVAVGTGTMQQNQSLIKG 238
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
Q R RA+ ++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFA
Sbjct: 239 LQKGIRERARKRLFKGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFA 298
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRK-YLEKWDKTYWPTYKVLDVLQKVFYRSNPAR 403
AKSGRMCAEAI+E S+NGT+M E +++ YL++WD+ Y TY VLD+LQ++FYR++ AR
Sbjct: 299 AKSGRMCAEAIVEISKNGTQMPTEKEIKNTYLKRWDRKYGATYIVLDILQRIFYRTDAAR 358
Query: 404 EAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EAFVEMC D+ VQK+TFDSYLYK+VV NP + +KL T+GSL+R AL
Sbjct: 359 EAFVEMCDDQDVQKLTFDSYLYKKVVMMNPWQQVKLTARTLGSLLRGQAL 408
>gi|224010635|ref|XP_002294275.1| hypothetical protein THAPSDRAFT_10234 [Thalassiosira pseudonana
CCMP1335]
gi|220970292|gb|EED88630.1| hypothetical protein THAPSDRAFT_10234 [Thalassiosira pseudonana
CCMP1335]
Length = 426
Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust.
Identities = 254/410 (61%), Positives = 323/410 (78%), Gaps = 8/410 (1%)
Query: 52 RVAVIGGGPAGGAAAETLAKN-GVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
+VAV+GGGP+G AAE A+ G++T + ERK+DN KPCGGAIPLCM+GEFD+P +DR
Sbjct: 4 KVAVVGGGPSGACAAEIFAQEKGIDTVMFERKMDNAKPCGGAIPLCMIGEFDIPESTVDR 63
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
KV +MK+ISPSN VDIG TL+P+EYIGM RRE++D YLR+RA GA INGL +D+
Sbjct: 64 KVRRMKLISPSNNEVDIGDTLQPNEYIGMCRREIMDKYLRDRAISYGAEPINGLVTAIDV 123
Query: 171 PRNF---EQPYVLYYTEYD-GTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAI 226
P + E+ Y L+Y E+ G+ GV +++ VD +IGADGANSRVAK+++AG+Y++AI
Sbjct: 124 PEDHKTTEKQYTLHYQEFQAGSSAGV--PKSMNVDLIIGADGANSRVAKAMDAGEYNFAI 181
Query: 227 AFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQ 286
AFQER+KI DE+M +YE +AEMYVGDDVSPDFYGWVFPK DHV VGTGTV ++ IK++Q
Sbjct: 182 AFQERIKITDEQMSFYEEMAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPAIKQYQ 241
Query: 287 LATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAK 346
A R+RA DKI GGKII+VEAHPIPEH RP R+ GR+ALVGDAAGYVTKCSGEGIYFAAK
Sbjct: 242 KAMRDRAGDKIAGGKIIKVEAHPIPEHYRPNRVQGRMALVGDAAGYVTKCSGEGIYFAAK 301
Query: 347 SGRMCAEAIIEGSENGTRMIDEGDL-RKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREA 405
SGRM AEAI++ + G R+ + ++ R YL +DK Y PTY VLD+LQKVFY +N AREA
Sbjct: 302 SGRMAAEAIVKLMDGGKRLPTQNEIERTYLADYDKLYGPTYTVLDILQKVFYSNNGAREA 361
Query: 406 FVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRR 455
FVE+C +YVQ++TFDSYLYK+V NPL+D+KL TIG L++ ++ +
Sbjct: 362 FVELCNSKYVQQVTFDSYLYKKVQGNNPLDDIKLLGETIGCLIKGYSIAK 411
>gi|126696158|ref|YP_001091044.1| aromatic-ring hydroxylase (flavoprotein monooxygenase)
[Prochlorococcus marinus str. MIT 9301]
gi|126543201|gb|ABO17443.1| Aromatic-ring hydroxylase (flavoprotein monooxygenase)
[Prochlorococcus marinus str. MIT 9301]
Length = 446
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 261/409 (63%), Positives = 318/409 (77%), Gaps = 8/409 (1%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAVIGGGP+G AAE LAK G++T+L ERKLDN KPCGGAIPLCMV EFDLP IIDR
Sbjct: 2 LRVAVIGGGPSGSCAAEILAKAGIKTWLFERKLDNAKPCGGAIPLCMVEEFDLPESIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTL----KPHEYIGMVRREVLDAYLRERAEKNGASVINGLFM 166
KV M+MISPSN VDI +E+IGM RREV+DA++R RA GA++INGL
Sbjct: 62 KVRHMRMISPSNREVDISLDRVYGKSDNEFIGMCRREVMDAFMRNRASDLGATLINGLVT 121
Query: 167 KMDLPRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
+ N + PY L Y+++ +G K G E + L VD +IGADGANSRVAK+++AGDY A
Sbjct: 122 SIHTGDNNQGPYKLSYSDFTNGDKKG--ELKELTVDLLIGADGANSRVAKAMDAGDYKVA 179
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT-HKGDIKK 284
IAFQER+K+P E+M YYE+LAEMYVG DVSPDFYGWVFPK DHVAVGTGT+ ++ IK
Sbjct: 180 IAFQERIKLPKEEMSYYEDLAEMYVGTDVSPDFYGWVFPKYDHVAVGTGTMQKNQSLIKG 239
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
Q RNRAK +++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFA
Sbjct: 240 LQEGVRNRAKKRLVNGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFA 299
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPARE 404
AKSGRMCAE I+E S+NG + E DL+ YL+KWDK Y TYKVL++LQ +FYR++ ARE
Sbjct: 300 AKSGRMCAEEIVEASKNGQVIPSEKDLKNYLKKWDKKYGTTYKVLEILQNIFYRNDSARE 359
Query: 405 AFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
AFVEMC D VQ++TFDSYLYK+VV PL+ LK+ + T+GS++R AL
Sbjct: 360 AFVEMCDDMDVQRLTFDSYLYKKVVSMKPLQQLKITMLTLGSILRGKAL 408
>gi|148242366|ref|YP_001227523.1| geranylgeranyl hydrogenase [Synechococcus sp. RCC307]
gi|147850676|emb|CAK28170.1| Geranylgeranyl hydrogenase [Synechococcus sp. RCC307]
Length = 467
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 258/405 (63%), Positives = 318/405 (78%), Gaps = 5/405 (1%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+GGGP+G AAE LAK G++T++ ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 2 LRVAVVGGGPSGSCAAEVLAKAGIQTWIFERKLDNAKPCGGAIPLCMVEEFDLPENIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
KV M+MISPSN V+I +EYIGM RREV+D++LR RA GA++INGL K++
Sbjct: 62 KVRNMRMISPSNREVEINLD-NENEYIGMCRREVMDSFLRNRAADLGANLINGLVTKIET 120
Query: 171 PRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
+ PY L YT+Y DG G ++LEVD +IGADGANSRVAK+++AGDY+ AIAFQ
Sbjct: 121 GPKRQGPYTLQYTDYSDGA--ATGTAKSLEVDLIIGADGANSRVAKAMDAGDYNVAIAFQ 178
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT-HKGDIKKFQLA 288
ER+K+P E+M YYENLAEMYVG DVSPDFY WVFPK DHVAVGTGT+ ++ IK Q+
Sbjct: 179 ERIKLPAEEMSYYENLAEMYVGTDVSPDFYAWVFPKYDHVAVGTGTMQENQALIKDLQVG 238
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA+ +++ G++I+VEAHPIPEHPRPRR+ G +ALVGDAAGYVTK SGEGIYFAAKSG
Sbjct: 239 IRQRARKRLIKGEVIKVEAHPIPEHPRPRRVVGGMALVGDAAGYVTKSSGEGIYFAAKSG 298
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RMCAE I+ S +G R+ E DL+ YL KWD+ Y TYKVL++LQ +FYR++ AREAFVE
Sbjct: 299 RMCAEEIVAASGSGQRVPTEKDLKGYLRKWDRKYGATYKVLELLQNIFYRNDAAREAFVE 358
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MC D+ VQ++TFDSYLYKRVV NP + LKL T+G+++R NAL
Sbjct: 359 MCDDKDVQRLTFDSYLYKRVVTMNPWQQLKLTFLTVGAVLRGNAL 403
>gi|116070686|ref|ZP_01467955.1| Geranylgeranyl reductase [Synechococcus sp. BL107]
gi|116066091|gb|EAU71848.1| Geranylgeranyl reductase [Synechococcus sp. BL107]
Length = 452
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 261/410 (63%), Positives = 316/410 (77%), Gaps = 10/410 (2%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
L+VAVIGGGP+G AAE LAK G+ET+L ERKLDN KPCGGAIPLCMV EF+LP IIDR
Sbjct: 2 LKVAVIGGGPSGSCAAEILAKAGIETWLFERKLDNAKPCGGAIPLCMVEEFNLPDSIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKP-----HEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
KV MKMISPSN VDI L P + YIGM RREV DA+LR RA G ++INGL
Sbjct: 62 KVRNMKMISPSNREVDI--QLDPLGYDENAYIGMCRREVFDAFLRNRAADLGTTLINGLV 119
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
K+D +N + PY ++Y +Y + G GE +TL+VD +IGADGANSRVAK+++AGDY+ A
Sbjct: 120 QKIDTGKNRQGPYCIHYADY-SSGGPTGEPKTLDVDLIIGADGANSRVAKAMDAGDYNVA 178
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD-IKK 284
IAFQER+K+P E+M YYE+LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ IK
Sbjct: 179 IAFQERIKLPPEEMTYYEDLAEMYVGTDVSPDFYAWVFPKYDHVAVGTGTMQQNQSLIKG 238
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
Q R RA ++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFA
Sbjct: 239 LQKGIRERATKRLFKGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFA 298
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRK-YLEKWDKTYWPTYKVLDVLQKVFYRSNPAR 403
AKSGRMCAEAI+E S NG + E ++ YL++WD+ Y TY VLD+LQ++FYR++ AR
Sbjct: 299 AKSGRMCAEAIVEISNNGANVPTEKQIKSTYLKRWDRKYGATYAVLDILQRIFYRNDAAR 358
Query: 404 EAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EAFVEMC D+ VQ++TFDSYLYKRVV NP + +KL + T+GSL+R AL
Sbjct: 359 EAFVEMCDDKDVQRLTFDSYLYKRVVLMNPWQQVKLTLRTLGSLLRGEAL 408
>gi|254432050|ref|ZP_05045753.1| geranylgeranyl reductase [Cyanobium sp. PCC 7001]
gi|197626503|gb|EDY39062.1| geranylgeranyl reductase [Cyanobium sp. PCC 7001]
Length = 475
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 260/404 (64%), Positives = 320/404 (79%), Gaps = 3/404 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+GGGP+G AAE LAK G++T++ ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 2 LRVAVVGGGPSGSCAAEVLAKAGIQTWIFERKLDNAKPCGGAIPLCMVSEFDLPEEIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
KV M+MISPSN VDI +EYIGM RRE+LDA+LR RA GA +INGL K+D
Sbjct: 62 KVRNMRMISPSNREVDI-HLDDQNEYIGMCRREILDAFLRNRAADLGAHLINGLVTKIDT 120
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
+N + PY L Y++Y G+ GE RTLEVD ++GADGANSRVAK+++AGDY+ AIAFQE
Sbjct: 121 GKNRQGPYTLTYSDY-GSGEATGETRTLEVDLIVGADGANSRVAKAMDAGDYNVAIAFQE 179
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLAT 289
R+K+P ++M YYE+LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ ++ IK Q
Sbjct: 180 RIKLPAKEMSYYEDLAEMYVGTDVSPDFYAWVFPKYDHVAVGTGTMQNNQALIKGLQEGI 239
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R RA+ +++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFAAKSGR
Sbjct: 240 RLRARKRLVNGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFAAKSGR 299
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
MCAE I+ S+ G + E DL+ YL KWD+ Y TYKVL++LQ +FYR++ AREAFVEM
Sbjct: 300 MCAEQIVAASQAGQSIPSEADLKVYLRKWDRQYGATYKVLELLQNIFYRNDAAREAFVEM 359
Query: 410 CADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
C D+ VQ++TFDSYLYKRVV NP + LKL + T+G+++R NAL
Sbjct: 360 CDDKDVQRLTFDSYLYKRVVAMNPWQQLKLTLLTLGAVLRGNAL 403
>gi|254525425|ref|ZP_05137477.1| geranylgeranyl reductase [Prochlorococcus marinus str. MIT 9202]
gi|221536849|gb|EEE39302.1| geranylgeranyl reductase [Prochlorococcus marinus str. MIT 9202]
Length = 446
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 260/409 (63%), Positives = 317/409 (77%), Gaps = 8/409 (1%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAVIGGGP+G AAE LAK G++T+L ERKLDN KPCGGAIPLCMV EFDLP IIDR
Sbjct: 2 LRVAVIGGGPSGSCAAEILAKAGIKTWLFERKLDNAKPCGGAIPLCMVDEFDLPESIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQT----LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFM 166
KV M+MISPSN VDI +EYIGM RREV+DA++R RA GA++INGL
Sbjct: 62 KVRHMRMISPSNREVDISLDNVYGKSENEYIGMCRREVMDAFMRNRAADLGATLINGLVT 121
Query: 167 KMDLPRNFEQPYVLYYTEYD-GTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
++ + PY L Y+++ G K G E + L VD +IGADGANSRVAK+++AGDY A
Sbjct: 122 SINTGVKNQGPYKLKYSDFSSGDKKG--EIKELTVDLLIGADGANSRVAKAMDAGDYKVA 179
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT-HKGDIKK 284
+AFQER+K+P E+M YYE+LAEMYVG DVSPDFYGWVFPK DHVAVGTGT+ ++ IK
Sbjct: 180 VAFQERIKLPKEEMSYYEDLAEMYVGSDVSPDFYGWVFPKYDHVAVGTGTMQENQSLIKG 239
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
Q RNRA+ +++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFA
Sbjct: 240 LQEGVRNRAQKRLVNGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFA 299
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPARE 404
AKSGRMCAE I+E S+NG + E DL+ YL+KWDK Y TYKVL++LQ +FYR++ ARE
Sbjct: 300 AKSGRMCAEEIVEASKNGQEIPSEKDLKNYLKKWDKKYGTTYKVLEILQNIFYRNDSARE 359
Query: 405 AFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
AFVEMC D VQ++TFDSYLYKRVV PL+ LK+ + T+GS++R AL
Sbjct: 360 AFVEMCDDMDVQRLTFDSYLYKRVVSMKPLQQLKITMLTLGSILRGKAL 408
>gi|157413189|ref|YP_001484055.1| aromatic-ring hydroxylase (flavoprotein monooxygenase)
[Prochlorococcus marinus str. MIT 9215]
gi|157387764|gb|ABV50469.1| Aromatic-ring hydroxylase (flavoprotein monooxygenase)
[Prochlorococcus marinus str. MIT 9215]
Length = 444
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 260/408 (63%), Positives = 316/408 (77%), Gaps = 6/408 (1%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAVIGGGP+G AAE LAK+G++T+L ERKLDN KPCGGAIPLCMV EFDLP IIDR
Sbjct: 2 LRVAVIGGGPSGSCAAEILAKSGIKTWLFERKLDNAKPCGGAIPLCMVEEFDLPESIIDR 61
Query: 111 KVTKMKMISPSNVAVDI-GQTLKP---HEYIGMVRREVLDAYLRERAEKNGASVINGLFM 166
KV MKMISPSN VDI + P EYIGM+RREV+D+++R RA GA+++NGL
Sbjct: 62 KVRNMKMISPSNREVDIILDDIYPGSKKEYIGMLRREVMDSFMRNRAADLGATLVNGLVS 121
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAI 226
K++ N + PY L+YTE + V K+ LEVD ++GADGA SRVAK+++AGDY+YA+
Sbjct: 122 KIETGTNKQGPYTLHYTETLNDESEVKGKQ-LEVDLIVGADGATSRVAKAMDAGDYNYAV 180
Query: 227 AFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD-IKKF 285
A QER+K+P E+M YYE+ AEMYVG DVSPDFYGWVFPK DHVA GTGT+ G IK
Sbjct: 181 AIQERIKLPKEEMKYYEDRAEMYVGTDVSPDFYGWVFPKYDHVAAGTGTMKQNGGLIKSL 240
Query: 286 QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAA 345
Q+ R RAK +++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFAA
Sbjct: 241 QIGVRERAKKRLVNGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFAA 300
Query: 346 KSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREA 405
KSGRMCAE I+E S+NG + E DL+ YL+KWDK Y TY VLD+LQ++FY S+ AREA
Sbjct: 301 KSGRMCAEQIVESSQNGKIIPTEKDLKIYLKKWDKKYGTTYTVLDILQRIFYTSDGAREA 360
Query: 406 FVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
FVEMC D VQ++TFDSYLYK VV PL+ LKL T+GS++R AL
Sbjct: 361 FVEMCGDMDVQRLTFDSYLYKTVVAMKPLQQLKLTFLTLGSVLRGKAL 408
>gi|87124316|ref|ZP_01080165.1| geranylgeranyl hydrogenase [Synechococcus sp. RS9917]
gi|86167888|gb|EAQ69146.1| geranylgeranyl hydrogenase [Synechococcus sp. RS9917]
Length = 457
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 260/410 (63%), Positives = 316/410 (77%), Gaps = 10/410 (2%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+GGGP+G AAE LAK G++T+L ERKLDN KPCGGAIPLCMV EF++P IIDR
Sbjct: 2 LRVAVVGGGPSGSCAAEILAKAGIQTWLFERKLDNAKPCGGAIPLCMVDEFEIPDHIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKP-----HEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
KV MKMISPSN VDI L P + YIGM RREV DA+LR RA + G +++NGL
Sbjct: 62 KVRNMKMISPSNREVDI--KLDPLGYDQNAYIGMCRREVFDAFLRNRAAELGTTLVNGLV 119
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
K+D + PY L+Y +Y + G GE ++LEVD +IGADGANSRVAK+++AGDY+ A
Sbjct: 120 QKIDTGNQRQGPYTLHYADY-SSGGPTGEIKSLEVDLIIGADGANSRVAKAMDAGDYNVA 178
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD-IKK 284
IAFQER+K+P E+M YYE+LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ IK
Sbjct: 179 IAFQERIKLPAEEMAYYEDLAEMYVGTDVSPDFYAWVFPKYDHVAVGTGTMQQNQSLIKG 238
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
Q R RA ++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFA
Sbjct: 239 LQKGIRERASKRLFKGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFA 298
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRK-YLEKWDKTYWPTYKVLDVLQKVFYRSNPAR 403
AKSGRMCAEAI+E S NG R+ E +++ YL++WD+ Y TY VLD+LQ++FYR++ AR
Sbjct: 299 AKSGRMCAEAIVEISGNGARIPTEKEIKSTYLKRWDRKYGATYAVLDILQRIFYRNDAAR 358
Query: 404 EAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EAFVEMC D VQK+TFDSYLYKRVV NP + +KL + T+GSL+R AL
Sbjct: 359 EAFVEMCDDRDVQKLTFDSYLYKRVVMMNPWQQIKLTLRTLGSLLRGEAL 408
>gi|33862850|ref|NP_894410.1| aromatic-ring hydroxylase (flavoprotein monooxygenase)
[Prochlorococcus marinus str. MIT 9313]
gi|33634766|emb|CAE20752.1| Aromatic-ring hydroxylase (flavoprotein monooxygenase)
[Prochlorococcus marinus str. MIT 9313]
Length = 468
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 254/405 (62%), Positives = 313/405 (77%), Gaps = 7/405 (1%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+GGGP+G AAE LAK G++T+L ERKLDN KPCGGAIPLCMV EFDLP IIDR
Sbjct: 2 LRVAVVGGGPSGSCAAEVLAKAGIQTWLFERKLDNAKPCGGAIPLCMVDEFDLPESIIDR 61
Query: 111 KVTKMKMISPSNVAVDI--GQTLKP---HEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
KV M+MISPSN VDI + P EYIGM RREV+DA++R+RA G ++INGL
Sbjct: 62 KVRNMRMISPSNREVDITLDKVYSPDDKSEYIGMCRREVMDAFMRDRAASLGTNLINGLV 121
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
K+D N + PY + Y++Y T GE ++LEVD +IGADGANSRVA +++AGDY+ A
Sbjct: 122 TKIDTGSNRQGPYTITYSDY-STGKSTGEAKSLEVDLIIGADGANSRVATAMDAGDYNVA 180
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT-HKGDIKK 284
IAFQER+K+P+E+M YYE+LAEMYVG DVSPDFYGWVFPK DHVAVGTGT+ ++ IK
Sbjct: 181 IAFQERIKLPNEEMAYYEDLAEMYVGTDVSPDFYGWVFPKYDHVAVGTGTMQKNQTLIKS 240
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
Q R RAK +++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFA
Sbjct: 241 LQKGVRERAKKRLVHGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFA 300
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPARE 404
AKSGRMCAE I+E S +G + E DL+KYL+KWD+ Y TY VL +LQ +FY ++ ARE
Sbjct: 301 AKSGRMCAEQIVESSRSGELIPSEADLKKYLKKWDRKYGSTYIVLSILQAIFYSNDTARE 360
Query: 405 AFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVR 449
AFV MC D VQ++TFDSYLYK+VV NP + +KL + T+ +L R
Sbjct: 361 AFVAMCDDMDVQRLTFDSYLYKKVVAMNPWQQIKLTLLTVDALAR 405
>gi|87302812|ref|ZP_01085623.1| Geranylgeranyl reductase [Synechococcus sp. WH 5701]
gi|87282695|gb|EAQ74653.1| Geranylgeranyl reductase [Synechococcus sp. WH 5701]
Length = 463
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 252/400 (63%), Positives = 311/400 (77%), Gaps = 3/400 (0%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTK 114
++GGGP+G AE LAK G+ET+L ERKLDN KPCGGAIPLCMV EFDLP IIDRKV
Sbjct: 1 MVGGGPSGSCVAEVLAKAGIETWLFERKLDNAKPCGGAIPLCMVEEFDLPESIIDRKVRN 60
Query: 115 MKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNF 174
M+MISPSN VDI +EYIGM RRE+LD +LR RA + GA +INGL +D
Sbjct: 61 MRMISPSNREVDI-HLENENEYIGMCRREILDGFLRNRAAELGAHLINGLVQSIDTGSAR 119
Query: 175 EQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKI 234
+ PY L+Y +Y G G GE ++LEVD ++GADGANSRVAK+++AGDY+ AIAFQER+++
Sbjct: 120 QGPYTLHYADYSGG-GPTGEIKSLEVDLIVGADGANSRVAKAMDAGDYNVAIAFQERIRL 178
Query: 235 PDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT-HKGDIKKFQLATRNRA 293
P E+M YYE+LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ ++ IK Q R RA
Sbjct: 179 PKEEMSYYEDLAEMYVGTDVSPDFYAWVFPKYDHVAVGTGTMQKNQALIKSLQKGIRKRA 238
Query: 294 KDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAE 353
++L G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFAAKSGRMCAE
Sbjct: 239 SARLLRGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFAAKSGRMCAE 298
Query: 354 AIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADE 413
I+ S +G ++ E DL+ Y+ KWDK Y TYKVL++LQ +FYR++ AREAFVEMC D+
Sbjct: 299 QIVAASASGAKIPTEADLKVYIRKWDKQYGATYKVLEILQNIFYRNDAAREAFVEMCDDK 358
Query: 414 YVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
VQ++TFDSYLYKRVV NP + +KL + T+G+++R NAL
Sbjct: 359 DVQRLTFDSYLYKRVVMMNPWQQIKLTLLTLGAVLRGNAL 398
>gi|124023375|ref|YP_001017682.1| aromatic-ring hydroxylase [Prochlorococcus marinus str. MIT 9303]
gi|123963661|gb|ABM78417.1| Aromatic-ring hydroxylase (flavoprotein monooxygenase)
[Prochlorococcus marinus str. MIT 9303]
Length = 468
Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust.
Identities = 254/405 (62%), Positives = 313/405 (77%), Gaps = 7/405 (1%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+GGGP+G AAE LAK G++T+L ERKLDN KPCGGAIPLCMV EFDLP IIDR
Sbjct: 2 LRVAVVGGGPSGSCAAEVLAKAGIQTWLFERKLDNAKPCGGAIPLCMVDEFDLPESIIDR 61
Query: 111 KVTKMKMISPSNVAVDI--GQTLKP---HEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
KV M+MISPSN VDI + P EYIGM RREV+DA++R+RA G ++INGL
Sbjct: 62 KVRNMRMISPSNREVDITLDKVYSPDDKSEYIGMCRREVMDAFMRDRAASLGTNLINGLV 121
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
K+D N + PY + Y++Y T GE ++LEVD +IGADGANSRVA +++AGDY+ A
Sbjct: 122 TKIDTGSNRQGPYTITYSDY-STGKSTGEAKSLEVDLIIGADGANSRVATAMDAGDYNVA 180
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT-HKGDIKK 284
IAFQER+K+P+E+M YYE+LAEMYVG DVSPDFYGWVFPK DHVAVGTGT+ ++ IK
Sbjct: 181 IAFQERIKLPNEEMAYYEDLAEMYVGTDVSPDFYGWVFPKYDHVAVGTGTMQKNQTLIKS 240
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
Q R RAK +++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFA
Sbjct: 241 LQKGVRERAKKRLVHGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFA 300
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPARE 404
AKSGRMCAE I+E S +G + E DL+KYL+KWD+ Y TY VL +LQ +FY ++ ARE
Sbjct: 301 AKSGRMCAEQIVESSRSGELIPSEADLKKYLKKWDRKYGATYIVLSILQAIFYSNDTARE 360
Query: 405 AFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVR 449
AFV MC D VQ++TFDSYLYK+VV NP + +KL + T+ +L R
Sbjct: 361 AFVAMCDDMDVQRLTFDSYLYKKVVAMNPWQQIKLTLLTVDALAR 405
>gi|318041342|ref|ZP_07973298.1| geranylgeranyl hydrogenase [Synechococcus sp. CB0101]
Length = 455
Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust.
Identities = 260/401 (64%), Positives = 318/401 (79%), Gaps = 5/401 (1%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTK 114
++GGGP+G AAE LAK G+ET++ ERKLDN KPCGGAIPLCMV EFDLP IIDRKV
Sbjct: 1 MVGGGPSGSCAAEVLAKAGIETWIFERKLDNAKPCGGAIPLCMVAEFDLPESIIDRKVRN 60
Query: 115 MKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNF 174
MKMISPSN VDI +EYIGM RREV+DA+LR RA + GA ++NGL K+D N
Sbjct: 61 MKMISPSNREVDI-NLENDNEYIGMCRREVMDAFLRNRAAELGAHLVNGLVTKIDTGANR 119
Query: 175 EQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVK 233
+ PY L Y++Y DG G ++LEVD +IGADGANSRVAK+++AGDY+ AIAFQER+K
Sbjct: 120 QGPYTLTYSDYSDGE--ATGTTQSLEVDLIIGADGANSRVAKAMDAGDYNVAIAFQERIK 177
Query: 234 IPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT-HKGDIKKFQLATRNR 292
+P E+M YYE+LAEMYVG DVSPDFY WVFPK DHVAVGTGT+ ++ IK Q R R
Sbjct: 178 LPPEEMKYYESLAEMYVGTDVSPDFYAWVFPKYDHVAVGTGTMQENQALIKSLQEGIRER 237
Query: 293 AKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCA 352
AK +++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFAAKSGRMCA
Sbjct: 238 AKKRLVNGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFAAKSGRMCA 297
Query: 353 EAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCAD 412
E I+E S+ G ++ E DL+KYL+KWD+ Y TYKVL++LQ +FYR++ AREAFVEMC D
Sbjct: 298 EQIVESSQGGKKVPSEADLKKYLKKWDRQYGATYKVLEILQNIFYRNDAAREAFVEMCDD 357
Query: 413 EYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
+ VQ++TFDSYLYKRVV NP + LKL + T+GS++R NAL
Sbjct: 358 KDVQRLTFDSYLYKRVVAMNPWQQLKLTLLTLGSVLRGNAL 398
>gi|323449224|gb|EGB05114.1| hypothetical protein AURANDRAFT_31415 [Aureococcus anophagefferens]
Length = 424
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 262/406 (64%), Positives = 315/406 (77%), Gaps = 6/406 (1%)
Query: 52 RVAVIGGGPAGGAAAETLAKN-GVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
RVAV+GGGP+G AAE A+ +ET++IERK DN KPCGGAIPLCMV EFDLP DIIDR
Sbjct: 4 RVAVVGGGPSGACAAEICAQEPNIETYIIERKFDNAKPCGGAIPLCMVDEFDLPADIIDR 63
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
KV KMKMISPSN VDIG+TLK EYIGM RREV+D YLR+RA + GA IN L K+D
Sbjct: 64 KVRKMKMISPSNREVDIGKTLKEDEYIGMCRREVMDGYLRDRAVEYGAIPINALVTKIDT 123
Query: 171 PRNFEQP--YVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
P + + Y ++Y+ D G + +L+VD +IGADGANSRVAK+I+AG+Y++AIAF
Sbjct: 124 PADSDSQGRYTIHYSRND--LGRKAPEESLDVDVIIGADGANSRVAKAIDAGEYNFAIAF 181
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLA 288
QER+KI DEKM +Y+ LAEMYVGDDVSPDFYGWVFPK DHV VGTGTV ++ IK +Q A
Sbjct: 182 QERIKIDDEKMAFYDELAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVINRPGIKMYQDA 241
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA DKI GGKII+VEAHPIPEH RPRR+ R LVGDAAGYVTKCSGEGIYFAAKSG
Sbjct: 242 IRERAGDKIAGGKIIKVEAHPIPEHYRPRRVKNRAMLVGDAAGYVTKCSGEGIYFAAKSG 301
Query: 349 RMCAEAIIEGSENGTRM-IDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
RM AEA+++ + GT + +EG +Y++ +D Y PTY VLD+LQKVFY +N AREAFV
Sbjct: 302 RMAAEAVVKLMKGGTVLPTEEGITAEYIKPYDGLYGPTYTVLDILQKVFYTNNAAREAFV 361
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
+MC EYVQ +TF SYLYKR+V NP+ED+KL T+GSL+R A+
Sbjct: 362 DMCQSEYVQDVTFQSYLYKRLVTPNPVEDIKLLFGTVGSLLRGRAI 407
>gi|298708963|emb|CBJ30916.1| geranylgeranyl reductase; geranylgeranyl diphosphate reductase;
geranylgeranyl hydrogenase [Ectocarpus siliculosus]
Length = 474
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 262/432 (60%), Positives = 326/432 (75%), Gaps = 6/432 (1%)
Query: 26 AQALPRQQKFRVSAAKTSPKLTNRNLRVAVIGGGPAGGAAAETLAK-NGVETFLIERKLD 84
A+ Q+ +A +SP +VAV+GGGP+G AAE LA + V+ L ERK+D
Sbjct: 28 ARGFTGQRVAPAAATSSSPSGMKMKYKVAVVGGGPSGSCAAEILADCDDVDVTLFERKMD 87
Query: 85 NCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREV 144
N KPCGGAIPLCM+ EFDLP IIDRKV KMKMISP+N VDIGQTL EYIGMVRREV
Sbjct: 88 NAKPCGGAIPLCMIDEFDLPTSIIDRKVRKMKMISPTNREVDIGQTLGDDEYIGMVRREV 147
Query: 145 LDAYLRERAEKNGASVINGLFMKMDLPRNFEQ-PYVLYYTEYD-GTKGGVGEKRTLEVDA 202
+D ++R+RA + GA INGL +D+P + + Y +++ Y+ G++ GV + E D
Sbjct: 148 MDGFMRDRAIEKGAHAINGLVNDIDVPADKDSGKYKIHFARYEKGSRKGVQDSE--EFDL 205
Query: 203 VIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWV 262
+IG+DGANSRVAK+++AG Y+YAIAFQER+KI ++KM +YE +AEMYVGDDVSPDFYGWV
Sbjct: 206 IIGSDGANSRVAKAMDAGAYNYAIAFQERIKISEKKMEFYEEMAEMYVGDDVSPDFYGWV 265
Query: 263 FPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR 322
FPK DHV VGTGTV ++ IK +Q A R RA +KI GGKII++EAHPIPE+ RPRR+ GR
Sbjct: 266 FPKYDHVGVGTGTVVNRPKIKDYQDAIRKRAGEKIEGGKIIKIEAHPIPENYRPRRVVGR 325
Query: 323 VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRK-YLEKWDKT 381
+ALVGDAAGYVTKCSGEGIYFAAKSGRM AEA+++ + ++ E L+K YL+ +DK
Sbjct: 326 MALVGDAAGYVTKCSGEGIYFAAKSGRMAAEAVVQCIKQTGKLPTEAQLKKTYLKDYDKL 385
Query: 382 YWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAV 441
Y PTY VLD+LQKVFY +N AREAFVE+C EYVQK+TFDSYLYK+V NP+EDLKL
Sbjct: 386 YKPTYLVLDILQKVFYSNNAAREAFVELCESEYVQKVTFDSYLYKKVQGNNPVEDLKLLF 445
Query: 442 NTIGSLVRANAL 453
T GSL+R AL
Sbjct: 446 GTFGSLMRGQAL 457
>gi|219109757|ref|XP_002176632.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411167|gb|EEC51095.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 463
Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust.
Identities = 264/434 (60%), Positives = 328/434 (75%), Gaps = 9/434 (2%)
Query: 24 FIAQALPRQQKFRVSAAKTSPKLTNRNLRVAVIGGGPAGGAAAETLAKN-GVETFLIERK 82
F A + Q V +K++ + +VAV+GGGPAG AAE A+ G++T L ERK
Sbjct: 16 FTASSFVGQNLASVPVSKSA---LDMKYKVAVVGGGPAGACAAEIFAQEKGIDTVLFERK 72
Query: 83 LDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRR 142
LDN KPCGGAIPLCMVGEFDLP ++DRKV +M +ISP V VDIG+TLKP EYIGM RR
Sbjct: 73 LDNAKPCGGAIPLCMVGEFDLPESVVDRKVRRMNLISPKGVEVDIGETLKPDEYIGMTRR 132
Query: 143 EVLDAYLRERAEKNGASVINGLFMKMDLPRNF---EQPYVLYYTEYDGTKGGVGEKRTLE 199
E+LD YLR+RA GA ++NGL +D+P + E Y + Y Y+ G + ++
Sbjct: 133 EILDGYLRDRAIDYGAEIVNGLVTSIDIPADHKVSENQYTINYQAYE-EGSSAGTPKNMK 191
Query: 200 VDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFY 259
VD ++GADGANSRVAK+++AG Y++AIAFQER+KIPD+KM +YE +AEMYVGDDVSPDFY
Sbjct: 192 VDLIVGADGANSRVAKAMDAGQYNFAIAFQERIKIPDDKMKFYEEMAEMYVGDDVSPDFY 251
Query: 260 GWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL 319
GWVFPK DHV VGTGTV ++ IK++Q A R+RA DKI GGKII+VEAHPIPEH RPRR+
Sbjct: 252 GWVFPKYDHVGVGTGTVVNRPAIKQYQKAIRDRAGDKIAGGKIIKVEAHPIPEHYRPRRV 311
Query: 320 SGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDL-RKYLEKW 378
GR+ALVGDAAGYVTKCSGEGIYFAAKSGRM AE I++ +NG+ + + D+ R YL+K+
Sbjct: 312 QGRIALVGDAAGYVTKCSGEGIYFAAKSGRMAAEEIVKLMKNGSVLPTQADIERTYLKKY 371
Query: 379 DKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLK 438
D Y PTY VLD+LQKVFY +N AREAFVE+C +YVQ++TFDSYLYKRV NPL+DLK
Sbjct: 372 DNLYGPTYTVLDLLQKVFYVNNGAREAFVELCNSKYVQQVTFDSYLYKRVQGNNPLDDLK 431
Query: 439 LAVNTIGSLVRANA 452
L TIG L++ A
Sbjct: 432 LLGETIGCLIKGYA 445
>gi|123966058|ref|YP_001011139.1| aromatic-ring hydroxylase (flavoprotein monooxygenase)
[Prochlorococcus marinus str. MIT 9515]
gi|123200424|gb|ABM72032.1| Aromatic-ring hydroxylase (flavoprotein monooxygenase)
[Prochlorococcus marinus str. MIT 9515]
Length = 445
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 258/408 (63%), Positives = 316/408 (77%), Gaps = 6/408 (1%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAVIGGGP+G AAE LAK+G++T++ ERKLDN KPCGGAIPLCMV EFDLP IIDR
Sbjct: 2 LRVAVIGGGPSGSCAAEILAKSGIKTWIFERKLDNAKPCGGAIPLCMVEEFDLPESIIDR 61
Query: 111 KVTKMKMISPSNVAVDI-GQTLKP---HEYIGMVRREVLDAYLRERAEKNGASVINGLFM 166
KV MKMISPSN VDI + P EYIGM+RREV+D+++R RA GA+++NGL
Sbjct: 62 KVRNMKMISPSNREVDIILDDIYPGSKKEYIGMLRREVMDSFMRNRAADLGATLVNGLVS 121
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAI 226
K++ N + PY L+Y E + V K+ LEVD ++GADGA SRVAK+++AGDY+YA+
Sbjct: 122 KIETGTNKQGPYTLHYNEILNDQSEVKGKQ-LEVDLIVGADGATSRVAKAMDAGDYNYAV 180
Query: 227 AFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD-IKKF 285
A QER+K+P E+M YYE+ AEMYVG DVSPDFYGWVFPK DHVA GTGT+ G IK
Sbjct: 181 AIQERIKLPKEEMKYYEDRAEMYVGTDVSPDFYGWVFPKYDHVAAGTGTMKQNGGLIKSL 240
Query: 286 QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAA 345
Q+ R RAK +++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFAA
Sbjct: 241 QIGVRERAKKRLVNGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFAA 300
Query: 346 KSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREA 405
KSGRMCAE I+E S+NG + E DL+ YL+KWDK Y TY VLD+LQ++FY S+ AREA
Sbjct: 301 KSGRMCAEQIVESSQNGKIIPTEKDLKIYLKKWDKKYGTTYTVLDILQRIFYTSDGAREA 360
Query: 406 FVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
FVEMC D VQ++TFDSYLYK VV PL+ LKL + T+GS++R AL
Sbjct: 361 FVEMCGDMDVQRLTFDSYLYKTVVAMKPLQQLKLTLLTLGSVLRGKAL 408
>gi|33240282|ref|NP_875224.1| aromatic-ring hydroxylase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|33237809|gb|AAP99876.1| Geranylgeranyl hydrogenase ChlP [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 447
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 256/410 (62%), Positives = 321/410 (78%), Gaps = 10/410 (2%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAVIGGGP+G AE LAK G++T++ ERKLDN KPCGGAIPLCMV EF+LP IIDR
Sbjct: 2 LRVAVIGGGPSGSCTAEILAKAGIKTWIFERKLDNAKPCGGAIPLCMVSEFELPDSIIDR 61
Query: 111 KVTKMKMISPSNVAVDI------GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
KV M+MISPSN VDI G+T +EYIGM RREV+DA++R RA + GA ++NGL
Sbjct: 62 KVRNMRMISPSNREVDISLDKVYGET--ENEYIGMCRREVMDAFMRNRAAELGAILVNGL 119
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDY 224
K++ N + PY L Y++Y + GE +TLEVD ++GADGANSRVAK+++AGDY+
Sbjct: 120 VTKIETGTNRQGPYTLNYSDYS-SGDAKGEAKTLEVDLIVGADGANSRVAKAMDAGDYNV 178
Query: 225 AIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT-HKGDIK 283
AIAFQER+K+P+++M YYE+LAEMYVG DVSPDFYGWVFPK DHVAVGTGT+ ++ IK
Sbjct: 179 AIAFQERIKLPEKEMSYYEDLAEMYVGTDVSPDFYGWVFPKFDHVAVGTGTMQKNQALIK 238
Query: 284 KFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYF 343
Q R RA+ +++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYF
Sbjct: 239 DLQEGVRERAQKRLVNGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYF 298
Query: 344 AAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAR 403
AAKSGRMCAE I+ S+ G+++ E DL+KY++KWDK Y TYKVL++LQ +FY ++ AR
Sbjct: 299 AAKSGRMCAEEIVSASQGGSKIPTEDDLKKYIKKWDKKYGATYKVLEILQNIFYSNDGAR 358
Query: 404 EAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
EAFVEMC D VQ++TFDSYLYK VV PL+ LKL T+GS++R AL
Sbjct: 359 EAFVEMCDDIDVQRLTFDSYLYKTVVAMKPLQQLKLTFMTLGSVLRGRAL 408
>gi|159903544|ref|YP_001550888.1| aromatic-ring hydroxylase (flavoprotein monooxygenase)
[Prochlorococcus marinus str. MIT 9211]
gi|159888720|gb|ABX08934.1| Aromatic-ring hydroxylase (flavoprotein monooxygenase)
[Prochlorococcus marinus str. MIT 9211]
Length = 449
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 256/408 (62%), Positives = 317/408 (77%), Gaps = 6/408 (1%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LR+AVIGGGP+G AAE LAK G++T++ ERKLDN KPCGGAIPLCMV EFDLP IIDR
Sbjct: 2 LRIAVIGGGPSGSCAAEILAKAGIKTWIFERKLDNAKPCGGAIPLCMVSEFDLPDSIIDR 61
Query: 111 KVTKMKMISPSNVAVDIGQTL----KPHEYIGMVRREVLDAYLRERAEKNGASVINGLFM 166
KV M+MISPSN V+I +EYIGM RREV+DA++R RA GA++INGL
Sbjct: 62 KVRNMRMISPSNREVNISLDKVYGENDNEYIGMCRREVMDAFMRNRAADLGATLINGLVT 121
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAI 226
K++ N + PY L Y+++ + GE + LEVD +IGADGANSRVAK+++AGDY+ AI
Sbjct: 122 KIETGTNKQGPYTLSYSDFSNGET-TGENKKLEVDLIIGADGANSRVAKAMDAGDYNVAI 180
Query: 227 AFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT-HKGDIKKF 285
AFQER+K+P ++M YYE+LAEMYVG DVSPDFYGWVFPK DHVAVGTGT+ ++ IK
Sbjct: 181 AFQERIKLPKKEMGYYEDLAEMYVGTDVSPDFYGWVFPKYDHVAVGTGTMQKNQSLIKSL 240
Query: 286 QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAA 345
Q R RA+ +++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFAA
Sbjct: 241 QEGVRQRAQKRLVNGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFAA 300
Query: 346 KSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREA 405
KSGRMCAE I+E S+NG ++ E DL+KYL+KWDK Y TYKVL++LQ +FY ++ AREA
Sbjct: 301 KSGRMCAEEIVEASKNGAKIPTEQDLKKYLKKWDKKYGTTYKVLEILQNIFYSNDGAREA 360
Query: 406 FVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
FVEMC D VQ++TFDSYLYK VV P + LKL T+GS++R AL
Sbjct: 361 FVEMCDDMDVQRLTFDSYLYKTVVAMKPWQQLKLTFLTLGSVLRGRAL 408
>gi|451815089|ref|YP_007451541.1| 43 kD bacteriochlorophyll synthase subunit [Synechocystis sp. PCC
6803]
gi|1653425|dbj|BAA18339.1| 43 kD bacteriochlorophyll synthase subunit [Synechocystis sp. PCC
6803]
gi|451781058|gb|AGF52027.1| 43 kD bacteriochlorophyll synthase subunit [Synechocystis sp. PCC
6803]
Length = 359
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 239/358 (66%), Positives = 283/358 (79%), Gaps = 2/358 (0%)
Query: 97 MVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKN 156
MV EFDLP +IIDR+V KMKMISPSN+ V+IGQTLK EYIGM RREVLD +LRERAEK
Sbjct: 1 MVDEFDLPPEIIDRRVRKMKMISPSNIEVNIGQTLKDDEYIGMCRREVLDGFLRERAEKL 60
Query: 157 GASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS 216
G VING K+D+P PY L+Y ++ G GE + L+VD VIGADGANSR+AK+
Sbjct: 61 GTKVINGTVYKLDIPSKDSDPYTLHYADH-SVGGTTGEMKILKVDVVIGADGANSRIAKA 119
Query: 217 INAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV 276
I+AGDY+YAIAFQER+++P++KM YY+ LAEMYVGDDVSPDFY WVFPK DHVAVGTGT+
Sbjct: 120 IDAGDYNYAIAFQERIRLPEDKMAYYDELAEMYVGDDVSPDFYAWVFPKYDHVAVGTGTM 179
Query: 277 -THKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTK 335
+K IK Q R RA K+ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK
Sbjct: 180 KVNKARIKDLQAGIRTRAAKKLEGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTK 239
Query: 336 CSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKV 395
SGEGIYFAAKS RMCAE I+ S NG R+ E DL++Y+++WDK Y TY VLD+LQ+V
Sbjct: 240 SSGEGIYFAAKSARMCAETIVATSNNGQRVPTEADLKQYIKQWDKRYGATYLVLDILQRV 299
Query: 396 FYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
FYR++ REAFVEMC+D VQK+TFDSYLYK VVP NPL +K+ TIGSL+R NAL
Sbjct: 300 FYRTDATREAFVEMCSDIDVQKLTFDSYLYKTVVPANPLVQMKITAKTIGSLLRGNAL 357
>gi|58613461|gb|AAW79317.1| chloroplast geranylgeranyl reductase/hydrogenase [Isochrysis
galbana]
Length = 451
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 255/407 (62%), Positives = 320/407 (78%), Gaps = 7/407 (1%)
Query: 51 LRVAVIGGGPAGGAAAETLAKN-GVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
+RVAV+GGGPAG AAE A+ +E + ERK+DNCKPCGGAIPLCMV EF LP DI+D
Sbjct: 31 IRVAVVGGGPAGACAAEIFAQAPNIECTMFERKMDNCKPCGGAIPLCMVEEFSLPPDIVD 90
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPS VD+G+TLK EYIGM+RREV+D YLR+RA + GA+ +NGL K++
Sbjct: 91 RRVRKMKMISPSGREVDVGRTLKEDEYIGMLRREVMDKYLRDRAVQFGATPVNGLVQKVE 150
Query: 170 LPRNFEQPYVLYYTEYD-GTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
+ + PY + YT+Y+ GT G + E D ++GADGANSR AK+I+AG+Y+YAIAF
Sbjct: 151 FA-DTDGPYTIKYTKYEEGTPKGTPAE--AEFDIIVGADGANSRTAKAIDAGEYNYAIAF 207
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLA 288
QER+KI DEKM YYE+LAEMYVGDDVSPDFY WVFPK DHV VGTGTV ++ I ++Q A
Sbjct: 208 QERIKIADEKMAYYEDLAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVVNRPAISEYQAA 267
Query: 289 TRNRAKDKI-LGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
R R +K+ K+++VEAHPIPEH RPRR+ GRVALVGDAAGYVTKCSGEGIYFAAKS
Sbjct: 268 IRERCAEKLGPDPKVMKVEAHPIPEHMRPRRVVGRVALVGDAAGYVTKCSGEGIYFAAKS 327
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLR-KYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAF 406
GRM A+ I+ + G+R+ E +++ YL+K+D+ Y PTY VLD+LQKVFY +N AREAF
Sbjct: 328 GRMAAQEIVALTAGGSRLPTEQEIKDTYLKKFDQKYGPTYLVLDILQKVFYTNNGAREAF 387
Query: 407 VEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
V+MCA +YVQK+TFDSYLYK+V NPL+D+KL NTIGS+++ NA+
Sbjct: 388 VDMCASDYVQKVTFDSYLYKKVQGNNPLDDVKLLFNTIGSVIKGNAI 434
>gi|72382004|ref|YP_291359.1| geranylgeranyl reductase [Prochlorococcus marinus str. NATL2A]
gi|124025503|ref|YP_001014619.1| aromatic-ring hydroxylase (flavoprotein monooxygenase)
[Prochlorococcus marinus str. NATL1A]
gi|72001854|gb|AAZ57656.1| geranylgeranyl reductase:Geranylgeranyl reductase, plants and
cyanobacteria:Geranylgeranyl reductase, plantal and
prokaryotic [Prochlorococcus marinus str. NATL2A]
gi|123960571|gb|ABM75354.1| Aromatic-ring hydroxylase (flavoprotein monooxygenase)
[Prochlorococcus marinus str. NATL1A]
Length = 443
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 261/408 (63%), Positives = 317/408 (77%), Gaps = 6/408 (1%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAVIGGGP+G AAE LAK G++T++ ERKLDN KPCGGAIPLCMV EFDLP IIDR
Sbjct: 2 LRVAVIGGGPSGSCAAEILAKAGIKTWIFERKLDNAKPCGGAIPLCMVSEFDLPESIIDR 61
Query: 111 KVTKMKMISPSNVAVDI-GQTLKP---HEYIGMVRREVLDAYLRERAEKNGASVINGLFM 166
KV MKMISPSN VDI + P EYIGM+RREV+D+++R RA + GA+++NGL
Sbjct: 62 KVRNMKMISPSNREVDIILDDIYPGSDKEYIGMLRREVMDSFMRNRAAELGATLVNGLVS 121
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAI 226
K++ N + PY L+YTE K K+ LEVD ++GADGA SRVAK+++AGDY+YA+
Sbjct: 122 KIETGTNKQGPYTLHYTEILNDKSEEKGKQ-LEVDLIVGADGATSRVAKAMDAGDYNYAV 180
Query: 227 AFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD-IKKF 285
A QER+K+P E+M YYE+ AEMYVG DVSPDFYGWVFPK DHVA GTGT+ G IK
Sbjct: 181 AIQERIKLPKEEMKYYEDRAEMYVGTDVSPDFYGWVFPKYDHVAAGTGTMKQNGGLIKSL 240
Query: 286 QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAA 345
Q+ R RAK +++ G++I+VEAHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFAA
Sbjct: 241 QIGVRERAKKRLVNGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFAA 300
Query: 346 KSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREA 405
KSGRMCAE I+E S+NG + E DL+KYL+KWDK Y TY VLD+LQ++FY S+ AREA
Sbjct: 301 KSGRMCAEQIVESSQNGKIIPTENDLKKYLKKWDKKYGITYTVLDILQRIFYTSDGAREA 360
Query: 406 FVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
FVEMC D VQ++TFDSYLYK VV PL+ LKL + TIGS++R AL
Sbjct: 361 FVEMCGDMDVQRLTFDSYLYKTVVAMKPLQQLKLTLLTIGSVLRGKAL 408
>gi|37523946|ref|NP_927323.1| geranylgeranyl hydrogenase [Gloeobacter violaceus PCC 7421]
gi|35214952|dbj|BAC92318.1| geranylgeranyl hydrogenase [Gloeobacter violaceus PCC 7421]
Length = 398
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 245/405 (60%), Positives = 297/405 (73%), Gaps = 13/405 (3%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
LRVAV+G GP G +AAE AK G ET+LIE+ L N KPCGGAIPLCMV EFDLP +IID
Sbjct: 2 TLRVAVVGSGPGGSSAAEICAKAGFETYLIEKNLSNAKPCGGAIPLCMVSEFDLPSEIID 61
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V M MI+PSN AVDI T K EYIGM RREVLD +LR RA GA +I G F +
Sbjct: 62 RRVRNMSMIAPSNHAVDISLT-KQDEYIGMCRREVLDGFLRNRAASVGAHLIEGTFT--E 118
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
L R PYVL Y + DG R+L+ D VIGADG +S++AK+I+AGD YAIAFQ
Sbjct: 119 LKRG--TPYVLEYRDKDGNA------RSLKADIVIGADGFHSKIAKTIDAGDVPYAIAFQ 170
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT-HKGDIKKFQLA 288
ER+++P EKM YYE+ AEMY+G DVSPDFY W+FPK +HVAVGTGT++ +K I++ Q A
Sbjct: 171 ERIELPPEKMAYYEDRAEMYLGFDVSPDFYAWIFPKSNHVAVGTGTMSPNKDGIRRMQKA 230
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA KI GGKII++EAHP+PE RPRR+ RV LVGDAAGYVTK SGEGIYFAAKSG
Sbjct: 231 LRERAGAKIAGGKIIKIEAHPLPERSRPRRVVDRVMLVGDAAGYVTKSSGEGIYFAAKSG 290
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
RM A+ I+E + G ++ E L +Y+ +WD+ Y TY+VL +LQ VFYRS+ REAFVE
Sbjct: 291 RMAAQTIVEAAAGG-KLPSEAQLGEYVRRWDRQYGLTYRVLSILQDVFYRSDATREAFVE 349
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
MCAD VQ++TFDSYLYK VVP P K+ + T+GSL+R NAL
Sbjct: 350 MCADRDVQRLTFDSYLYKTVVPAGPFVQTKITLKTLGSLLRGNAL 394
>gi|357127918|ref|XP_003565624.1| PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic-like
[Brachypodium distachyon]
Length = 442
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/413 (59%), Positives = 306/413 (74%), Gaps = 6/413 (1%)
Query: 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDII 108
R LRVAV+GGGPAG +AAE LA G + FL+ER KPCGGAIPLCM+ EF +PL+++
Sbjct: 25 RPLRVAVVGGGPAGASAAEALASAGAQAFLLERSPAGAKPCGGAIPLCMLDEFSIPLELV 84
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
DR+VT+M+++SPSN+A D +TL P +I M+RREVLD++LR RA GA+++ GL +
Sbjct: 85 DRRVTRMRVLSPSNLAADFSKTLPPGAHIPMLRREVLDSFLRRRAADAGATLVPGLVTSL 144
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
LP PY+++Y G + LEVDAV+GADGANSRVA+ + AG Y AIAF
Sbjct: 145 SLPAGPSDPYLVHYISSAAADG----RSVLEVDAVVGADGANSRVAREVGAGGYSTAIAF 200
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLA 288
QER+++PD M YY++LAEMYVG DVSPDFYGWVFPKCDHVAVGTGTV K DIKKFQ
Sbjct: 201 QERIRLPDAAMGYYDDLAEMYVGGDVSPDFYGWVFPKCDHVAVGTGTVAAKPDIKKFQAG 260
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA KI GGK+I+VEAHPIPEHPRPRR+ GRVALVGDAAGYVT+CSGEGIYFAAKSG
Sbjct: 261 IRARAGPKIAGGKVIKVEAHPIPEHPRPRRVVGRVALVGDAAGYVTRCSGEGIYFAAKSG 320
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRK-YLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
R+C +A+ + T + EG +R+ YL WD + T++ LD+LQ+VFY N REA V
Sbjct: 321 RLCGQAMAD-EWRVTGKVTEGGIRQGYLRAWDDEFLLTFRFLDLLQRVFYGGNAGREALV 379
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKL 460
EMCADE+VQ+ TFD YL KR+ PG P DL+L T GS+VR + L +E+ +L
Sbjct: 380 EMCADEHVQRRTFDCYLNKRMAPGEPWADLQLLWRTAGSMVRCSVLGKEVQRL 432
>gi|414876947|tpg|DAA54078.1| TPA: hypothetical protein ZEAMMB73_341253 [Zea mays]
Length = 445
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/413 (58%), Positives = 308/413 (74%), Gaps = 3/413 (0%)
Query: 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDII 108
R LRVAV+GGGPAG +AAE LA G TFL+ER KPCGGAIPLCM+ EF +P D++
Sbjct: 28 RTLRVAVVGGGPAGASAAEALASAGARTFLLERSPAGAKPCGGAIPLCMLDEFAIPRDLV 87
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
DR+VT+M+++SPSN+A D + L P +I M+RREVLD++LR RA + GA ++ GL +
Sbjct: 88 DRRVTRMRVLSPSNLAADFSRALPPGAHIPMLRREVLDSFLRRRAVEAGAELVPGLVTSL 147
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRT-LEVDAVIGADGANSRVAKSINAGDYDYAIA 227
LP PY+++Y + GVG R+ LEVDA++GADGANSRVA+ + AGDY AIA
Sbjct: 148 SLPAGPADPYLVHYI--SSSPEGVGAGRSVLEVDAIVGADGANSRVAREVGAGDYTTAIA 205
Query: 228 FQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQL 287
FQER+++PD M YY++LAEMYVG DVSPDFYGWVFPKCDHVAVGTGTV K +IK+ Q
Sbjct: 206 FQERIRLPDAGMAYYDDLAEMYVGGDVSPDFYGWVFPKCDHVAVGTGTVAAKPEIKRLQS 265
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
R RA KI GG++++VEAHPIPEHPRPRR+ GRVALVGDAAGYVT+CSGEGIYFAAKS
Sbjct: 266 GIRARAGPKIAGGRVVKVEAHPIPEHPRPRRVVGRVALVGDAAGYVTRCSGEGIYFAAKS 325
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GR+C +A+ E + + G R YL +WD + ++ LD+LQ+VFY N REA V
Sbjct: 326 GRLCGQAMAEEWARTGSVTEAGLRRGYLRRWDDEFLLMFRFLDLLQRVFYGGNAGREALV 385
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKL 460
EMC+D+YVQ+ TF+SYLYKR+VPG P DL+L T+ S+VR + RE+++L
Sbjct: 386 EMCSDDYVQRRTFESYLYKRMVPGEPWGDLRLLWRTVASMVRCGVIGREVERL 438
>gi|242052533|ref|XP_002455412.1| hypothetical protein SORBIDRAFT_03g010340 [Sorghum bicolor]
gi|241927387|gb|EES00532.1| hypothetical protein SORBIDRAFT_03g010340 [Sorghum bicolor]
Length = 445
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/412 (58%), Positives = 305/412 (74%), Gaps = 2/412 (0%)
Query: 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDII 108
R LRVAV+GGGPAG +AAE LA G TFL+ER KPCGGAIPLCM+ EF +P D++
Sbjct: 29 RPLRVAVVGGGPAGASAAEALASAGARTFLLERSPAGAKPCGGAIPLCMLDEFAIPRDLV 88
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
DR+VT+M+++SPSN+A D + L P +I M+RREVLD++LR RA + GA ++ GL +
Sbjct: 89 DRRVTRMRVVSPSNLAADFSRALPPGAHIPMLRREVLDSFLRRRAAEAGAELVPGLVTSL 148
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
LP PY+++Y +G + LEVDA++GADGANSRVA+ + AGDY AIAF
Sbjct: 149 SLPAGPADPYLVHYISSSSPEGA--GRGVLEVDAIVGADGANSRVAREVGAGDYTTAIAF 206
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLA 288
QER+++PD M YY++LAEMYVG DVSPDFYGWVFPKCDHVAVGTGTV K +IK+ Q
Sbjct: 207 QERIRLPDAAMGYYDDLAEMYVGGDVSPDFYGWVFPKCDHVAVGTGTVAAKPEIKRLQSG 266
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA KI GG++++VEAHPIPEHPRPRR+ GRVALVGDAAGYVT+CSGEGIYFAAKSG
Sbjct: 267 IRARAGPKIAGGRVVKVEAHPIPEHPRPRRVVGRVALVGDAAGYVTRCSGEGIYFAAKSG 326
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
R+C +A+ E + + G R YL +WD + ++ LD+LQ+VFY N REA VE
Sbjct: 327 RLCGQAMAEEWARTGAVTEAGLRRGYLRRWDDEFLLMFRFLDLLQRVFYGGNAGREALVE 386
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKL 460
MCADEYVQ+ TF+SYLYKR+VPG P DL+L T+ S+VR + RE+++L
Sbjct: 387 MCADEYVQRRTFESYLYKRMVPGEPWGDLRLLWRTVASMVRCGVIGREVERL 438
>gi|326526579|dbj|BAJ97306.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 447
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 243/413 (58%), Positives = 308/413 (74%), Gaps = 4/413 (0%)
Query: 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDII 108
R LRVAV+GGGPAG +AAE LA G + FL+ER KPCGGAIPLCM+ EF +PL ++
Sbjct: 30 RPLRVAVVGGGPAGASAAEALASAGAQAFLLERSPAGAKPCGGAIPLCMLDEFAIPLGLV 89
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
DR+VT+M+++SPSN+A D G+ L P +I M+RREVLD++LR RA GA+++ GL +
Sbjct: 90 DRRVTRMRVLSPSNLAADFGRALPPGAHIPMLRREVLDSFLRTRAADAGATLVPGLVTSL 149
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
LP PY+++Y G + LEVDAV+GADGANSRVA+ + AGDY AIAF
Sbjct: 150 SLPAVPTDPYLVHYIS--SGDGPSPTRSVLEVDAVVGADGANSRVAREVGAGDYSTAIAF 207
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLA 288
QER+++PD+ M YY++LAEMYVG DVSPDFYGWVFPKCDHVAVGTGTV K +IKK Q
Sbjct: 208 QERIRLPDKAMEYYDDLAEMYVGGDVSPDFYGWVFPKCDHVAVGTGTVAAKPEIKKLQSG 267
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R RA KI GG++I+VEAHPIPEHPRPRR+ GRVALVGDAAGYVT+CSGEGIYFAAKSG
Sbjct: 268 IRARAGPKIAGGRVIKVEAHPIPEHPRPRRVVGRVALVGDAAGYVTRCSGEGIYFAAKSG 327
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRK-YLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
R+C +A+ + T + EG +R+ YL +WD + T++ LD+LQ+VFY N REA V
Sbjct: 328 RLCGQAMAK-EWRLTGAVTEGGIRRGYLRRWDDEFLLTFRFLDLLQRVFYGDNAGREALV 386
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKL 460
EMCADE+VQ+ TFD YL+KR+ PG P DL+L T GS+VR + L +E+ +L
Sbjct: 387 EMCADEHVQRRTFDCYLHKRMAPGEPWADLQLLWRTAGSMVRCSVLGKEVQRL 439
>gi|115435818|ref|NP_001042667.1| Os01g0265000 [Oryza sativa Japonica Group]
gi|56783772|dbj|BAD81184.1| putative geranylgeranyl hydrogenase [Oryza sativa Japonica Group]
gi|56783846|dbj|BAD81258.1| putative geranylgeranyl hydrogenase [Oryza sativa Japonica Group]
gi|113532198|dbj|BAF04581.1| Os01g0265000 [Oryza sativa Japonica Group]
Length = 457
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 239/423 (56%), Positives = 307/423 (72%), Gaps = 2/423 (0%)
Query: 39 AAKTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMV 98
++ +P R LRVAV+GGGPAG +AAE LA G + FL+ER KPCGGAIPLCM+
Sbjct: 21 SSSATPAPPRRPLRVAVVGGGPAGASAAEALASAGAQAFLLERNPSGAKPCGGAIPLCML 80
Query: 99 GEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGA 158
EF +P D++DR+VT+M+++SPSN+A D + L P +I M+RREVLD++LR RA GA
Sbjct: 81 DEFAIPRDLVDRRVTRMRVLSPSNLAADFSRALPPGAHIPMLRREVLDSFLRRRAADAGA 140
Query: 159 SVINGLFMKMDLPRN-FEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSI 217
+++ GL + LP + PY+++Y D + LEVDAVIGADGANSRVA+ +
Sbjct: 141 TLVPGLVTSLSLPADPATDPYLVHYISSDSGGPSS-SRCVLEVDAVIGADGANSRVAREV 199
Query: 218 NAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT 277
AGDY AIAFQER+++PDE M YY++LAEMYVG DVSPDFYGWVFPKCDHVAVGTGTV
Sbjct: 200 GAGDYSTAIAFQERIRLPDEAMAYYDDLAEMYVGGDVSPDFYGWVFPKCDHVAVGTGTVA 259
Query: 278 HKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCS 337
K +IK+ Q R RA K+ GG+++RVEAHPIPEHPRPRR+ GRVALVGDAAGYVT+CS
Sbjct: 260 AKPEIKRLQSGIRARAAGKVAGGRVVRVEAHPIPEHPRPRRVVGRVALVGDAAGYVTRCS 319
Query: 338 GEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFY 397
GEGIYFAA+SGR+C A+ + + + G YL +WD + PT++ LD+LQ+VFY
Sbjct: 320 GEGIYFAARSGRLCGRAMADEWRLTGAVTEAGIRAGYLRRWDDEFRPTFRFLDLLQRVFY 379
Query: 398 RSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREM 457
N REA VEMCADE+VQ+ TFDSYL+KR+ P P DL+L T ++VR L RE+
Sbjct: 380 GGNAGREALVEMCADEHVQRRTFDSYLHKRMAPAEPWGDLRLLWRTAAAMVRCGVLGREV 439
Query: 458 DKL 460
++L
Sbjct: 440 ERL 442
>gi|3023160|gb|AAC12646.1| geranylgeranyl reductase [Zantedeschia aethiopica]
Length = 291
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/266 (85%), Positives = 243/266 (91%)
Query: 197 TLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSP 256
TLEVDAVIGADGANSRVAK+I AGDY+YAIAFQERVKIP+EKM YY+ AEMYVG DVS
Sbjct: 19 TLEVDAVIGADGANSRVAKAIGAGDYEYAIAFQERVKIPEEKMEYYKERAEMYVGADVSS 78
Query: 257 DFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRP 316
DFY WVFPKCDHVAVGTGTV KGDIK+FQ ATR RA DKI GG+I+RVEAHPIPEHPRP
Sbjct: 79 DFYAWVFPKCDHVAVGTGTVIDKGDIKRFQAATRLRAGDKIEGGRILRVEAHPIPEHPRP 138
Query: 317 RRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLE 376
RR+ RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+EGSE G+RM+DE DLR+YL
Sbjct: 139 RRVLDRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAILEGSEAGSRMVDESDLRRYLN 198
Query: 377 KWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLED 436
K+DKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPG+PLED
Sbjct: 199 KFDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGSPLED 258
Query: 437 LKLAVNTIGSLVRANALRREMDKLTI 462
LKLAV TIGSL+RANALR MD T+
Sbjct: 259 LKLAVKTIGSLIRANALRNYMDTNTL 284
>gi|397586533|gb|EJK53643.1| hypothetical protein THAOC_26871, partial [Thalassiosira oceanica]
Length = 495
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/375 (60%), Positives = 289/375 (77%), Gaps = 9/375 (2%)
Query: 39 AAKTSPKLTNRNLRVAVIGGGPAGGAAAETLAKN-GVETFLIERKLDNCKPCGGAIPLCM 97
A TS + +VAV+GGGP+G AAE A+ ++T L ERK+DN KPCGGAIPLCM
Sbjct: 122 APATSSSALSMKYKVAVVGGGPSGACAAEIFAQEKNIDTVLFERKMDNAKPCGGAIPLCM 181
Query: 98 VGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNG 157
+GEFD+P +DRKV +MK+ISP+N+ VDIG TL+P+EYIGM RRE++D +LR+RA G
Sbjct: 182 IGEFDIPETTVDRKVRRMKLISPTNIEVDIGDTLQPNEYIGMCRREIMDKFLRDRAISYG 241
Query: 158 ASVINGLFMKMDLP----RNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSR 212
A IN L +D+P N + Y + Y+E+ +G++ G ++ + VD ++GADGANSR
Sbjct: 242 AEPINALVTAIDVPADHVENPDAKYNIKYSEFVEGSRTGTAKE--MMVDLIVGADGANSR 299
Query: 213 VAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVG 272
VAK+++AG+Y++AIAFQER+KI DEK+ +YE +AEMYVGDDVSPDFYGWVFPK DHV VG
Sbjct: 300 VAKAMDAGEYNFAIAFQERIKISDEKLKFYEEMAEMYVGDDVSPDFYGWVFPKYDHVGVG 359
Query: 273 TGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGY 332
TGTV ++ IK++Q A R+RA DKI GGKII+VEAHPIPEH RPRR+ GR+ALVGDAAGY
Sbjct: 360 TGTVVNRPAIKQYQKAIRDRAGDKIAGGKIIKVEAHPIPEHYRPRRVQGRMALVGDAAGY 419
Query: 333 VTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDL-RKYLEKWDKTYWPTYKVLDV 391
VTKCSGEGIYFAAKSGRM AEAI++ + G R+ + D+ R Y+ +DK Y PTY VLD+
Sbjct: 420 VTKCSGEGIYFAAKSGRMAAEAIVKLMDGGRRLPTQADIERTYIADYDKLYGPTYTVLDI 479
Query: 392 LQKVFYRSNPAREAF 406
LQKVFY +N AREA
Sbjct: 480 LQKVFYSNNGAREAL 494
>gi|397634871|gb|EJK71614.1| hypothetical protein THAOC_06923 [Thalassiosira oceanica]
Length = 360
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/347 (60%), Positives = 272/347 (78%), Gaps = 8/347 (2%)
Query: 115 MKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLP--- 171
MK+ISP+NV VDIG TL+P+EYIGM RRE++D +LR+RA GA IN L +D+P
Sbjct: 1 MKLISPTNVEVDIGDTLQPNEYIGMCRREIMDKFLRDRAISYGAEPINALVTAIDVPADH 60
Query: 172 -RNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
N + Y + Y+E+ +G++ G + + VD ++GADGANSRVAK+++AG+Y++AIAFQ
Sbjct: 61 VENPDAKYNIKYSEFVEGSRTGTA--KEMMVDLIVGADGANSRVAKAMDAGEYNFAIAFQ 118
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLAT 289
ER+KI DEK+ +YE +AEMYVGDDVSPDFYGWVFPK DHV VGTGTV ++ IK++Q A
Sbjct: 119 ERIKISDEKLKFYEEMAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPAIKQYQKAI 178
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R+RA DKI GGKII+VEAHPIPEH RPRR+ GR+ALVGDAAGYVTKCSGEGIYFAAKSGR
Sbjct: 179 RDRAGDKIAGGKIIKVEAHPIPEHYRPRRVQGRMALVGDAAGYVTKCSGEGIYFAAKSGR 238
Query: 350 MCAEAIIEGSENGTRMIDEGDL-RKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
M AEAI++ + G R+ + D+ R Y+ +DK Y PTY VLD+LQKVFY +N AREAFVE
Sbjct: 239 MAAEAIVKLMDGGRRLPTQADIERTYIADYDKLYGPTYTVLDILQKVFYSNNGAREAFVE 298
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRR 455
+C +YVQ++TFDSYLYK+V NPL+D+KL TIG L++ ++ +
Sbjct: 299 LCNSKYVQQVTFDSYLYKKVQGNNPLDDIKLLGETIGCLIKGYSIAK 345
>gi|413968578|gb|AFW90626.1| geranylgeranyl reductase [Solanum tuberosum]
Length = 249
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/250 (81%), Positives = 218/250 (87%), Gaps = 1/250 (0%)
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIA 227
MD+P+ PYVL+YT YD G GEK TLEVDAVIGADGANSRVAKSINAGDY+YAIA
Sbjct: 1 MDMPKAPNSPYVLHYTSYDSKTNGAGEKCTLEVDAVIGADGANSRVAKSINAGDYEYAIA 60
Query: 228 FQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQL 287
FQER++I D+KM YYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHK DIKKFQL
Sbjct: 61 FQERIRISDDKMKYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKADIKKFQL 120
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
ATR RA KI GGKIIRVEAHPIPEHPRPRRL RVALVGDAAGYVTKCSGEGIYFAAKS
Sbjct: 121 ATRLRADSKITGGKIIRVEAHPIPEHPRPRRLQDRVALVGDAAGYVTKCSGEGIYFAAKS 180
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GRMCAEAI+EGSENG RM+DE DLRKYLEKWDKTYWPTYK L + + + ++EAFV
Sbjct: 181 GRMCAEAIVEGSENGKRMVDESDLRKYLEKWDKTYWPTYKCLIYCRSIL-QVESSKEAFV 239
Query: 408 EMCADEYVQK 417
EMCADEYVQ+
Sbjct: 240 EMCADEYVQR 249
>gi|228478498|gb|ACQ41835.1| geranyl-geranyl reductase [Elaeis oleifera]
Length = 207
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/207 (90%), Positives = 199/207 (96%)
Query: 256 PDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPR 315
PDFYGWVFPKCDHVAVGTGTVTHKG+IK+FQ ATR RA+DKI GGKIIRVEAHPIPEHPR
Sbjct: 1 PDFYGWVFPKCDHVAVGTGTVTHKGEIKRFQAATRLRARDKIEGGKIIRVEAHPIPEHPR 60
Query: 316 PRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYL 375
PRR+ GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+EGSENG RMIDE DLRKYL
Sbjct: 61 PRRVLGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSENGNRMIDESDLRKYL 120
Query: 376 EKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLE 435
+K+D+ YWPTYKVLDVLQKVFYRSN AREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLE
Sbjct: 121 KKFDRMYWPTYKVLDVLQKVFYRSNSAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLE 180
Query: 436 DLKLAVNTIGSLVRANALRREMDKLTI 462
DLKLAVNTIGSLVRANALRREM+K+T+
Sbjct: 181 DLKLAVNTIGSLVRANALRREMNKITL 207
>gi|224124074|ref|XP_002330098.1| predicted protein [Populus trichocarpa]
gi|222871232|gb|EEF08363.1| predicted protein [Populus trichocarpa]
Length = 210
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/224 (84%), Positives = 202/224 (90%), Gaps = 14/224 (6%)
Query: 239 MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKIL 298
M+YYE+LAEMYVGDDVSP FYGWVFPKCDHVAVGTGTVTHKGDIKKFQ ATRNRA+DKIL
Sbjct: 1 MMYYEDLAEMYVGDDVSPGFYGWVFPKCDHVAVGTGTVTHKGDIKKFQEATRNRARDKIL 60
Query: 299 GGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEG 358
GGKIIRVEAHPIPEHPRPRRL GRVALVGDAAGYV KCSGEGIYFAAKSGRMCAEA++EG
Sbjct: 61 GGKIIRVEAHPIPEHPRPRRLLGRVALVGDAAGYVIKCSGEGIYFAAKSGRMCAEAMVEG 120
Query: 359 SENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKM 418
SENG +M+DE DLRKYLEKWD+TYWPTYKVLDVLQKVFYRSNPAR+AFVEMCADE
Sbjct: 121 SENGKKMVDESDLRKYLEKWDETYWPTYKVLDVLQKVFYRSNPARKAFVEMCADE----- 175
Query: 419 TFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
V PGNPLEDLKLAVNTIGSLVRA ALRREM+KL++
Sbjct: 176 ---------VAPGNPLEDLKLAVNTIGSLVRATALRREMEKLSV 210
>gi|25992742|gb|AAN77241.1| geranyl-geranyl reductase [Xerophyta humilis]
Length = 202
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/202 (87%), Positives = 191/202 (94%)
Query: 261 WVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS 320
WVFPKCDHVAVGTGTVTHKG+IKKFQ ATR RA+DKI GGKIIRVEAHPIPEHPRPRR+
Sbjct: 1 WVFPKCDHVAVGTGTVTHKGEIKKFQAATRLRARDKIEGGKIIRVEAHPIPEHPRPRRVL 60
Query: 321 GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDK 380
RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+E SENG RMIDE DLR+YL+K+D
Sbjct: 61 DRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEASENGKRMIDESDLRRYLKKFDD 120
Query: 381 TYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLA 440
YWPTYKVLDVLQKVFYRSNPAREAFVEMCAD+YVQKMTFDSYLYK+VVPGNP++DLKLA
Sbjct: 121 MYWPTYKVLDVLQKVFYRSNPAREAFVEMCADKYVQKMTFDSYLYKKVVPGNPIDDLKLA 180
Query: 441 VNTIGSLVRANALRREMDKLTI 462
VNTIGSL+RANALRREM K+T+
Sbjct: 181 VNTIGSLIRANALRREMQKITL 202
>gi|125525296|gb|EAY73410.1| hypothetical protein OsI_01293 [Oryza sativa Indica Group]
Length = 293
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 165/263 (62%), Positives = 202/263 (76%)
Query: 198 LEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPD 257
L VDAVIGADGANSRVA+ + AGDY AIAFQER+++PDE M YY++LAEMYVG DVSPD
Sbjct: 16 LVVDAVIGADGANSRVAREVGAGDYSTAIAFQERIRLPDEAMAYYDDLAEMYVGGDVSPD 75
Query: 258 FYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPR 317
FYGWVFPKCDHVAVGTGTV K +IK+ Q R RA K+ GG+++RVEAHPIPEHPRPR
Sbjct: 76 FYGWVFPKCDHVAVGTGTVAAKPEIKRLQSGIRARAAGKVAGGRVVRVEAHPIPEHPRPR 135
Query: 318 RLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEK 377
R+ GRVALVGDAAGYVT+CSGEGIYFAA+SGR+C A+ + + + G YL +
Sbjct: 136 RVVGRVALVGDAAGYVTRCSGEGIYFAARSGRLCGRAMADEWRLTGAVTEAGIRAGYLRR 195
Query: 378 WDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDL 437
WD + PT++ LD+LQ+VFY N REA VEMCADE+VQ+ TFDSYL+KR+ P P DL
Sbjct: 196 WDDEFRPTFRFLDLLQRVFYGGNAGREALVEMCADEHVQRRTFDSYLHKRMAPAEPWGDL 255
Query: 438 KLAVNTIGSLVRANALRREMDKL 460
+L T ++VR L RE+++L
Sbjct: 256 RLLWRTAAAMVRCGVLGREVERL 278
>gi|62319720|dbj|BAD95270.1| geranylgeranyl reductase [Arabidopsis thaliana]
Length = 160
Score = 310 bits (794), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 145/160 (90%), Positives = 155/160 (96%)
Query: 303 IRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENG 362
IRVEAHPIPEHPRPRRLS RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+EGS+NG
Sbjct: 1 IRVEAHPIPEHPRPRRLSKRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSQNG 60
Query: 363 TRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDS 422
+MIDEGDLRKYLEKWDKTY PTY+VLDVLQKVFYRSNPAREAFVEMC DEYVQKMTFDS
Sbjct: 61 KKMIDEGDLRKYLEKWDKTYLPTYRVLDVLQKVFYRSNPAREAFVEMCNDEYVQKMTFDS 120
Query: 423 YLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
YLYKRV PG+PLED+KLAVNTIGSLVRANALRRE++KL++
Sbjct: 121 YLYKRVAPGSPLEDIKLAVNTIGSLVRANALRREIEKLSV 160
>gi|222424568|dbj|BAH20239.1| AT1G74470 [Arabidopsis thaliana]
Length = 160
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 144/160 (90%), Positives = 155/160 (96%)
Query: 303 IRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENG 362
IRVEAHPIPEHPRPRRLS RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+EGS+NG
Sbjct: 1 IRVEAHPIPEHPRPRRLSKRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSQNG 60
Query: 363 TRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDS 422
+MIDEGDLRKYLEKWDKTY PTY+VLDVLQKVFYRSNPAREAFVEMC DEYVQKMTFDS
Sbjct: 61 KKMIDEGDLRKYLEKWDKTYLPTYRVLDVLQKVFYRSNPAREAFVEMCNDEYVQKMTFDS 120
Query: 423 YLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
YLY+RV PG+PLED+KLAVNTIGSLVRANALRRE++KL++
Sbjct: 121 YLYERVAPGSPLEDIKLAVNTIGSLVRANALRREIEKLSV 160
>gi|119513846|ref|ZP_01632807.1| Geranylgeranyl reductase [Nodularia spumigena CCY9414]
gi|119461502|gb|EAW42578.1| Geranylgeranyl reductase [Nodularia spumigena CCY9414]
Length = 209
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 143/207 (69%), Positives = 164/207 (79%), Gaps = 1/207 (0%)
Query: 248 MYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLATRNRAKDKILGGKIIRVE 306
MYVG+DVS DFY WVFPK DHVAVGTGT+ +K IK+ Q R RA +K+ GGKII+VE
Sbjct: 1 MYVGNDVSTDFYAWVFPKYDHVAVGTGTMQVNKASIKQLQAGIRARASEKLAGGKIIKVE 60
Query: 307 AHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMI 366
AHPIPEHPRPRR+ GR+ALVGDAAGYVTK SGEGIYFAAKSGRMCAE I+E S +G +
Sbjct: 61 AHPIPEHPRPRRVVGRIALVGDAAGYVTKSSGEGIYFAAKSGRMCAETIVEMSNSGATIP 120
Query: 367 DEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYK 426
E DL+ YL++WDK Y TYKVLD+LQ VFYRS+ REAFVEMC D VQK+TFDSYLYK
Sbjct: 121 TEKDLKVYLKRWDKKYGLTYKVLDILQTVFYRSDATREAFVEMCDDLDVQKLTFDSYLYK 180
Query: 427 RVVPGNPLEDLKLAVNTIGSLVRANAL 453
VVP NP LK+ T+GSL+R NAL
Sbjct: 181 TVVPANPFTQLKITAKTLGSLIRGNAL 207
>gi|219849505|ref|YP_002463938.1| geranylgeranyl reductase [Chloroflexus aggregans DSM 9485]
gi|219543764|gb|ACL25502.1| geranylgeranyl reductase [Chloroflexus aggregans DSM 9485]
Length = 421
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 169/420 (40%), Positives = 231/420 (55%), Gaps = 23/420 (5%)
Query: 52 RVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRK 111
RV ++G G AA TL G+ET LIE++L KPCGGA+P EFDLP +IDRK
Sbjct: 4 RVLIVGASVGGATAAITLRSFGIETILIEKELVKAKPCGGAVPPAAFREFDLPTSLIDRK 63
Query: 112 VTKMKMISPSNVAVDI---GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
V + ++SPS + G +Y+ MVRREV D++LR RA++ GA +I+ + +
Sbjct: 64 VRQCLIVSPSGQETRVPVAGTVPSEDDYVAMVRREVFDSFLRRRAQERGAELIHAQLIGL 123
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
+ R + Y G +G V D VIGADGA S AK + + A+A
Sbjct: 124 RVDRRGVEAT---YRTPSGHEGSVW------ADVVIGADGAYSPTAKFLGLPNLPRAVAM 174
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLA 288
QER+K+P +KM +E A++Y+G +VSPD Y W FPK DH+AVG G G K L
Sbjct: 175 QERIKLPPDKMARWEETADLYLGHEVSPDLYAWAFPKRDHIAVGIGAGPRHGSAAKQLLN 234
Query: 289 T-RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
+ R + GG++I EAH +P PRP RV +GDAAG V SGEGIY+A KS
Sbjct: 235 NLKRRLGSALDGGQVILREAHALPMEPRPHLAFDRVMFIGDAAGLVVHTSGEGIYWAMKS 294
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
G+M A+ + E + + E +LR Y +W K Y Y+ L LQ Y + E F
Sbjct: 295 GQMAAQTLAEYLDAPS----EANLRTYERRWWKQYGTMYRFLRFLQVWGYGNERQMEVFT 350
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALR-----REMDKLTI 462
EMC + VQ++TFDSY++K++ P L L++ I S VR N +R RE LTI
Sbjct: 351 EMCRNYDVQRLTFDSYMHKQMAPAPWLAQLRMTAEIIASEVR-NYVRPRTPLREQLGLTI 409
>gi|163847644|ref|YP_001635688.1| geranylgeranyl reductase [Chloroflexus aurantiacus J-10-fl]
gi|222525502|ref|YP_002569973.1| geranylgeranyl reductase [Chloroflexus sp. Y-400-fl]
gi|10198164|gb|AAG15228.1|AF288462_8 BchP [Chloroflexus aurantiacus]
gi|163668933|gb|ABY35299.1| geranylgeranyl reductase [Chloroflexus aurantiacus J-10-fl]
gi|222449381|gb|ACM53647.1| geranylgeranyl reductase [Chloroflexus sp. Y-400-fl]
Length = 419
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 166/420 (39%), Positives = 229/420 (54%), Gaps = 23/420 (5%)
Query: 52 RVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRK 111
RV ++G G AA TL G+ET ++E++L KPCGGA+P EFDLP +IDRK
Sbjct: 4 RVLIVGASVGGATAAITLRSFGIETIMLEKELSKAKPCGGAVPPAAFREFDLPTSLIDRK 63
Query: 112 VTKMKMISPSNVAVDI---GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
V + ++SPS + G +Y+ MVRREV D++LR+RA++ GA +I+ +
Sbjct: 64 VKQCLIVSPSGQETRVPVAGTIPSDDDYVAMVRREVFDSFLRQRAQERGADLIHAQLTGL 123
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
+ R + V Y G +G V D VIGADGA S AK + A+A
Sbjct: 124 RVDR---RGVVATYRTPSGHEGSVW------ADVVIGADGAYSPTAKFLGLPHLPRAVAI 174
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGT-VTHKGDIKKFQL 287
QER+K+ +KM +E A++Y+G +VSPD Y W FPK DH+AVG G H K+
Sbjct: 175 QERIKLSPDKMARWEETADLYLGYEVSPDLYAWAFPKRDHIAVGIGAGPRHSTAAKQLLT 234
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
+ R D + GG+ I EAH +P PRP R L+GDAAG V SGEGIY+A KS
Sbjct: 235 NLKRRLGDALAGGQTILREAHALPMEPRPHMAFDRAMLIGDAAGLVVHTSGEGIYWAMKS 294
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
G+M A+ + E + + +LR Y +W K Y Y+ L LQ Y + E F
Sbjct: 295 GQMAAQTLAEYLDAPS----AANLRHYERRWWKQYGTMYRFLRFLQMWGYGNERQMEVFT 350
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALR-----REMDKLTI 462
EMC + VQ++TFDSY++K++ P L L++ I S VR N LR RE LT+
Sbjct: 351 EMCRNYDVQRLTFDSYMHKQMAPAPWLAQLRMTAEIIASEVR-NYLRPRTPIREQLGLTV 409
>gi|57283362|emb|CAG26756.1| putative geranylgeranyl reductase [Silene latifolia]
Length = 151
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 136/151 (90%), Positives = 141/151 (93%)
Query: 202 AVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGW 261
AVIGADGANSRVAK+I AGDY+YAIAFQER+KIPD KM YYE+LAEMYVGDDVSPDFYGW
Sbjct: 1 AVIGADGANSRVAKNIGAGDYEYAIAFQERIKIPDSKMTYYEDLAEMYVGDDVSPDFYGW 60
Query: 262 VFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSG 321
VFPKCDHVAVGTGTVTHK DIKKFQLATR RA DKI GGKIIRVEAHPIPEHPRPRR+
Sbjct: 61 VFPKCDHVAVGTGTVTHKSDIKKFQLATRTRAMDKIEGGKIIRVEAHPIPEHPRPRRVLD 120
Query: 322 RVALVGDAAGYVTKCSGEGIYFAAKSGRMCA 352
RVALVGDAAGYVTKCSGEGIYFAAKSGRM A
Sbjct: 121 RVALVGDAAGYVTKCSGEGIYFAAKSGRMXA 151
>gi|57283364|emb|CAG26757.1| putative geranylgeranyl reductase [Silene viscosa]
Length = 151
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/151 (89%), Positives = 140/151 (92%)
Query: 202 AVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGW 261
AVIGADGANSRVAK+I AGDY+YAIAFQER+KIPD KM YYE+LAEMYVGDDVSPDFYGW
Sbjct: 1 AVIGADGANSRVAKNIGAGDYEYAIAFQERIKIPDSKMTYYEDLAEMYVGDDVSPDFYGW 60
Query: 262 VFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSG 321
VFPKCDHVAVGTGTVTHK DIKKFQLATR RA DKI GGKIIRVEAHPIPEHPRPRR+
Sbjct: 61 VFPKCDHVAVGTGTVTHKSDIKKFQLATRTRAMDKIEGGKIIRVEAHPIPEHPRPRRVLD 120
Query: 322 RVALVGDAAGYVTKCSGEGIYFAAKSGRMCA 352
RVALVGDAAGYVT CSGEGIY AAKSGRMCA
Sbjct: 121 RVALVGDAAGYVTXCSGEGIYSAAKSGRMCA 151
>gi|148657371|ref|YP_001277576.1| geranylgeranyl reductase [Roseiflexus sp. RS-1]
gi|148569481|gb|ABQ91626.1| geranylgeranyl reductase [Roseiflexus sp. RS-1]
Length = 406
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 164/411 (39%), Positives = 225/411 (54%), Gaps = 16/411 (3%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V V+G G AA+TLA+ GV ++ER KPCGGA+P EFDLP +I RKV
Sbjct: 4 VLVVGASVGGSTAADTLARAGVPVVMLERDTSYVKPCGGAVPPVAFTEFDLPETLISRKV 63
Query: 113 TKMKMISPSNVAVDI---GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
+ SPS V+I G +YI M RE D Y+R+RA + GA +I G + D
Sbjct: 64 HHALVHSPSERVVEIEVAGVNHSDQDYIAMCCREEFDRYIRQRAVQRGAMLIEGQLV--D 121
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
L + E Y + G + + L V AVIGADGA S AK + + IA Q
Sbjct: 122 LAFDKEGVTATYRERFGGAR------QQLRVTAVIGADGAYSTTAKLLGLPNLPRCIAIQ 175
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGT-VTHKGDIKKFQLA 288
+R+++P KM +E+ A++Y+G +VSPD Y W FPK DHVAVG GT H ++
Sbjct: 176 QRIRLPAGKMARWEDTADLYLGPEVSPDLYAWAFPKSDHVAVGIGTGPAHSKRARELLAN 235
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
++R + + GG+II EAH +P PR R L+GDAAG V SGEGIY+A KSG
Sbjct: 236 LKHRIRRDLEGGEIILEEAHALPMEPREHMAFERAMLIGDAAGLVVHTSGEGIYWAMKSG 295
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
+M AE +IE + + LR+Y +W KTY Y+ L LQK Y S E F +
Sbjct: 296 KMAAETLIESLPDASLTA----LRRYERRWWKTYGTMYRFLVFLQKWGYGSARQMEVFTD 351
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDK 459
MC + VQ++TF+SY++K + P L L++ + I + VR RR D+
Sbjct: 352 MCRNLDVQRLTFESYMHKTMAPVPWLAQLRMTADIIAAQVRHYLPRRRTDQ 402
>gi|347753875|ref|YP_004861439.1| geranylgeranyl reductase [Candidatus Chloracidobacterium
thermophilum B]
gi|347586393|gb|AEP10923.1| geranylgeranyl reductase/geranylgeranyl reductase family
[Candidatus Chloracidobacterium thermophilum B]
Length = 398
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 165/402 (41%), Positives = 228/402 (56%), Gaps = 21/402 (5%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
+RV V GGGP G AA TLA+ GVET LIE+ KPCGGAIP +V +FD+P +I R
Sbjct: 1 MRVIVCGGGPGGSTAAATLARAGVETVLIEKSFSRIKPCGGAIPPVLVRDFDIPEHLIQR 60
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHE-YIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
+V+ + + +PS AV T+ H+ Y+GMV RE DA+LR+RA + GA V+ G +D
Sbjct: 61 RVSSVAVYAPSGRAV----TMDIHQGYVGMVCREAFDAFLRQRASQLGALVVEGRVEGVD 116
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDY-AIAF 228
E+ + +T G ++TL DA+IGADGANS VA++ N A A
Sbjct: 117 AT---ERGATVTFTTPQ------GNRQTLVADAIIGADGANSFVARTFNLHQGGLVAAAI 167
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLA 288
QER + E +Y SPDFYGWVFPK DHVAVGTGT ++K A
Sbjct: 168 QERFALNTETARRLNERCAIYYDGRYSPDFYGWVFPKADHVAVGTGTAIRSANLKGHLEA 227
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
+ + + E PIP P R ++ RVALVGDAAG V SGEGI++A KSG
Sbjct: 228 FKQHLG---ISERPTLREGAPIPLRPYDRWVTNRVALVGDAAGLVASSSGEGIFYAMKSG 284
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
M AEA++E + + E R Y + + K Y T++ L+++Q ++Y+++ REAFV
Sbjct: 285 EMAAEAMLECRHD---LRSEKLYRAYQKAFLKKYGATFRFLELMQNLYYKNDARREAFVA 341
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRA 450
+C D VQ +TF SY+YK +V L+ +++ L RA
Sbjct: 342 ICRDRGVQDLTFQSYMYKTLVRMPMLDGIRIMSKNFYHLTRA 383
>gi|194332876|ref|YP_002014736.1| geranylgeranyl reductase [Prosthecochloris aestuarii DSM 271]
gi|194310694|gb|ACF45089.1| geranylgeranyl reductase [Prosthecochloris aestuarii DSM 271]
Length = 379
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 168/401 (41%), Positives = 240/401 (59%), Gaps = 28/401 (6%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
VAVIGGGP+G AA LAK G+ T LIER L N KPCGGAIPL ++ EF++P ++++K+
Sbjct: 5 VAVIGGGPSGAVAAAILAKAGLSTVLIERNLANVKPCGGAIPLGLIEEFNIPDPLVEKKL 64
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPR 172
+KM + SP + + P+ Y+GMVRRE D+YLR+RA + GA ++ L ++
Sbjct: 65 SKMSVRSPRGRKISMEM---PNGYVGMVRRERFDSYLRDRAVRLGADIVEALVREIKPAS 121
Query: 173 NFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN-AGDYDYAIAFQER 231
N ++ +KG +E D +IGADGANS+ A+ ++ + IA Q+R
Sbjct: 122 NGHSIHL--------SKGHA----PIEADFIIGADGANSKTAEELDFPANELQVIAMQQR 169
Query: 232 VKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRN 291
D + YE+L E++ +VSPDFYGW+FPK DH+A+GTGT K D+K Q
Sbjct: 170 FHYSD-TLKPYEDLVEIWFDGEVSPDFYGWIFPKTDHIAIGTGTEFRKHDLKSLQ----K 224
Query: 292 RAKDKI-LGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRM 350
R +KI + K EA IP PR R LVGDAAG VT +GEGI+FA +SG++
Sbjct: 225 RFIEKIGITDKPYLDEAAKIPMKPRKSFTQDRAILVGDAAGLVTPANGEGIFFAMRSGKL 284
Query: 351 CAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMC 410
AEA+IE R+ + LR Y +K+ K Y + L VLQ V+Y+++ RE+FV +C
Sbjct: 285 GAEAMIE------RIRNNKPLRSYEKKFRKLYSQIFFGLQVLQSVYYKNDRLRESFVAIC 338
Query: 411 ADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRAN 451
D+ VQ++TFDSYLYK++VP +K+ I L + +
Sbjct: 339 QDDDVQQITFDSYLYKKMVPAPWSVQMKIFGKNIYHLTKGS 379
>gi|156743680|ref|YP_001433809.1| geranylgeranyl reductase [Roseiflexus castenholzii DSM 13941]
gi|156235008|gb|ABU59791.1| geranylgeranyl reductase [Roseiflexus castenholzii DSM 13941]
Length = 406
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 160/407 (39%), Positives = 223/407 (54%), Gaps = 16/407 (3%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V V+G G AA+TLA+ GV ++ER KPCGGA+P EFDLP +I RKV
Sbjct: 4 VLVVGASVGGATAADTLARAGVPVVMLERDTSYVKPCGGAVPPVAFTEFDLPETLISRKV 63
Query: 113 TKMKMISPSNVAVDI---GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
+ SPS V+I G +YI M RE D Y+R+RA ++GA++I G + D
Sbjct: 64 HHALVHSPSERVVEIEVAGVHRSDQDYIAMCCREEFDCYIRQRAVQHGATLIEGQLI--D 121
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
L + E V Y + G + + L AVIGADGA S AK + + IA Q
Sbjct: 122 LAFDKEGVTVTYRERFGGAR------QELRAVAVIGADGAYSTTAKLLGLPNLPRCIAIQ 175
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGT-VTHKGDIKKFQLA 288
+R+++P KM +E+ A++Y+G +VSPD Y W FPK DHVAVG GT +H ++
Sbjct: 176 QRIRLPASKMARWEDTADLYLGPEVSPDLYAWAFPKSDHVAVGIGTGPSHSKRARELLAN 235
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
+ R + GG++I EAH +P PR R L+GDAAG V SGEGIY+A KSG
Sbjct: 236 LKRRISRDLEGGEVILEEAHALPMEPREHMAFERAMLIGDAAGLVVHTSGEGIYWAMKSG 295
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
+M AE +I + + LR+Y +W KTY Y+ L LQK Y + E F +
Sbjct: 296 KMAAETLIASLPDASL----AALRRYERRWWKTYGTMYRFLVWLQKWGYGNARQMEVFTD 351
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRR 455
MC + VQ++TF+SY++K + P L L++ + I + VR RR
Sbjct: 352 MCRNLDVQRLTFESYMHKSMTPVPWLAQLRMTADIIAAQVRHYLPRR 398
>gi|110598296|ref|ZP_01386571.1| geranylgeranyl reductase:Geranylgeranyl reductase, plantal and
prokaryotic [Chlorobium ferrooxidans DSM 13031]
gi|110340104|gb|EAT58604.1| geranylgeranyl reductase:Geranylgeranyl reductase, plantal and
prokaryotic [Chlorobium ferrooxidans DSM 13031]
Length = 380
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 160/403 (39%), Positives = 237/403 (58%), Gaps = 31/403 (7%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
VAV+GGGP+G AA LA+ G+ T LIER +N KPCGGAIPL ++ EF +P +++++K+
Sbjct: 5 VAVLGGGPSGSVAAAELARAGLSTILIERNFENVKPCGGAIPLGLIEEFRIPSELVEKKL 64
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPR 172
++MK SP +++ P+ Y+GMVRRE D +LR AEK GA+V GL +
Sbjct: 65 SRMKARSPKGRVIEMNM---PNGYVGMVRREKFDRWLRTEAEKAGATVAEGLVNTIT--- 118
Query: 173 NFEQPYVLYYTEYDG--TKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDY-AIAFQ 229
DG K + L+ +IGADGANS+ A ++ + IA Q
Sbjct: 119 ----------PSADGFVIKTLNDKIAPLKAARIIGADGANSKTADELHFPPNELKVIAMQ 168
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLAT 289
+R + + N+ E++ +VSPDFYGW+FPK DH+A+GTGT H+ +IK Q
Sbjct: 169 QRFHY-SPAIEKFSNIVEIWFDGEVSPDFYGWIFPKADHLAIGTGTEDHRHNIKALQ--- 224
Query: 290 RNRAKDKI-LGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R +KI + K EA IP PR + LVGDAAG VT +GEGI+FA +SG
Sbjct: 225 -RRFIEKIGITDKPYLDEAAKIPMKPRKSFTQEKAILVGDAAGLVTPANGEGIFFAMRSG 283
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
++ A+A+IE +NG L Y +++ + Y P + L+VLQ ++Y+++ RE+FV
Sbjct: 284 KLGAQAMIEHLKNG------APLANYEKEFRRLYAPIFFGLEVLQAIYYKTDRLRESFVA 337
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRAN 451
+CAD+ VQ++TFDSYLYK++VP +K+ I L++ +
Sbjct: 338 ICADDDVQQITFDSYLYKKMVPAPWPVQMKIFSKNIYHLIKGS 380
>gi|309792704|ref|ZP_07687155.1| geranylgeranyl reductase [Oscillochloris trichoides DG-6]
gi|308225253|gb|EFO79030.1| geranylgeranyl reductase [Oscillochloris trichoides DG6]
Length = 405
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 153/402 (38%), Positives = 225/402 (55%), Gaps = 16/402 (3%)
Query: 52 RVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRK 111
RV ++G G AA TL G+ET L+E++L KPCGGA+P EFD+P +IDRK
Sbjct: 4 RVLIVGASVGGATAAITLRGMGIETVLLEKELHKPKPCGGAVPPAAFREFDIPTSLIDRK 63
Query: 112 VTKMKMISPSNVAVDI---GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
VT +++SPS + G H+Y+ MVRREV D +LRERA++ GA +I+G +
Sbjct: 64 VTICRLVSPSGQEASVPVAGTNPTEHDYVAMVRREVFDGFLRERAQQRGAELIHGQLNGL 123
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
++ + + Y + DG ++T+ D VIGADGA S A+ + AIA
Sbjct: 124 EVGASGVR--ATYRSMSDG------REQTIHADVVIGADGAYSPTARLLGLPPLPRAIAI 175
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGT-VTHKGDIKKFQL 287
QER+ +P E M +++ A +++G ++SPD Y W FPK DH+A+G GT H K+
Sbjct: 176 QERIALPPEAMREWQDTATIFLGRELSPDLYSWAFPKHDHLAIGIGTGPAHSKQAKQLLE 235
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
+ R K+ GG+++ EA+ +P P+ R LVGDAAG VT SGEGIY+A KS
Sbjct: 236 NLKQRLAPKLAGGRLLLREAYALPMQPQKYLAFDRAMLVGDAAGLVTHTSGEGIYWAMKS 295
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
G++ A+ + + + T +LR Y W + Y Y L LQK Y + E F
Sbjct: 296 GQLAAQVLSQYLDAPT----AANLRNYDRLWWQQYGTMYTFLRGLQKWGYGNERQMEVFT 351
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVR 449
EMC + VQ++TFDSY++K + P +K+ + + S VR
Sbjct: 352 EMCRNPDVQRLTFDSYMHKTMAPAPWAVQMKMTWDILRSQVR 393
>gi|21675064|ref|NP_663129.1| geranylgeranyl hydrogenase [Chlorobium tepidum TLS]
gi|21648302|gb|AAM73471.1| geranylgeranyl hydrogenase [Chlorobium tepidum TLS]
Length = 383
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 165/384 (42%), Positives = 228/384 (59%), Gaps = 30/384 (7%)
Query: 73 GVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTL- 131
G T LIER L N KPCGGAIPL ++ EFD+P +++++K+T+M + SP G+T+
Sbjct: 25 GHSTILIERNLANVKPCGGAIPLGLIEEFDIPDELVEKKLTRMSVRSPK------GETIF 78
Query: 132 --KPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTK 189
P+ Y+GMVRRE D YLRE+A+K GA V+ L K++ R+ ++ + L +G
Sbjct: 79 MHMPNGYVGMVRRERFDRYLREKAQKAGAEVVEALVKKIE--RSVDR-FTLQLFNKEGEA 135
Query: 190 GGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDY-AIAFQERVKIPDEKMVYYENLAEM 248
+E VIGADGANS+ A + D IA Q+R DE + YE L E+
Sbjct: 136 -----LPPVEASYVIGADGANSKTADELGFPPNDLKVIAMQQRFHYCDE-LKPYEELVEI 189
Query: 249 YVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKI-LGGKIIRVEA 307
+ +VSPDFYGW+FPK DH+A+GTGT H+ DIK+ Q +R +KI + K EA
Sbjct: 190 WFDGEVSPDFYGWIFPKTDHIAIGTGTEEHRNDIKQLQ----HRFVEKIGIAEKPYLNEA 245
Query: 308 HPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMID 367
IP PR R LVGDAAG VT +GEGI+FA +SG++ AEA+IE N T
Sbjct: 246 AKIPMKPRRSFTQERAILVGDAAGLVTPANGEGIFFAMRSGKLGAEAMIERIRNNT---- 301
Query: 368 EGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKR 427
L Y +K+ K Y P + L VLQ V+Y+S+ RE+FV +C D+ VQ +TFDSYLYK+
Sbjct: 302 --PLSSYEKKFRKLYSPIFFGLQVLQSVYYKSDRLRESFVAICRDKDVQGITFDSYLYKK 359
Query: 428 VVPGNPLEDLKLAVNTIGSLVRAN 451
+VP +K+ I L + +
Sbjct: 360 MVPAPWSVQMKIMAKNIYHLAKGS 383
>gi|193211697|ref|YP_001997650.1| geranylgeranyl reductase [Chlorobaculum parvum NCIB 8327]
gi|193085174|gb|ACF10450.1| geranylgeranyl reductase [Chlorobaculum parvum NCIB 8327]
Length = 383
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 162/381 (42%), Positives = 225/381 (59%), Gaps = 24/381 (6%)
Query: 73 GVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLK 132
G T LIER L N KPCGGAIPL ++ EFD+P +++++K+T+M + SP + +
Sbjct: 25 GHSTILIERNLANVKPCGGAIPLGLIEEFDIPDELVEKKLTRMSVRSPKGETIFMHM--- 81
Query: 133 PHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGV 192
P+ Y+GMVRRE D+YLRE+A+K GA ++ L K+D + +T + K G
Sbjct: 82 PNGYVGMVRRERFDSYLREKAQKAGAELVEALVKKIDRASD-------RFTIHLFNKEGE 134
Query: 193 GEKRTLEVDAVIGADGANSRVAKSINAGDYDY-AIAFQERVKIPDEKMVYYENLAEMYVG 251
+E VIGADGANS+ A+ + D IA Q+R DE + YE L E++
Sbjct: 135 ALP-PVEASYVIGADGANSKTAEELGFPPNDLKVIAMQQRFHYCDE-LKPYEELVEIWFD 192
Query: 252 DDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKI-LGGKIIRVEAHPI 310
+VSPDFYGW+FPK DH+A+GTGT H+ DIK+ Q R +KI + K EA I
Sbjct: 193 GEVSPDFYGWIFPKTDHIAIGTGTEEHRRDIKELQ----KRFVEKIGITEKPYLNEAAKI 248
Query: 311 PEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGD 370
P PR R LVGDAAG VT +GEGI+FA +SG++ AEA+IE N T
Sbjct: 249 PMKPRRSFTQERAILVGDAAGLVTPANGEGIFFAMRSGKLGAEAMIERIRNNT------P 302
Query: 371 LRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVP 430
L Y +K+ K Y P + L VLQ V+Y+S+ RE+FV +C D+ VQ +TFDSYLYK++VP
Sbjct: 303 LSSYEKKFRKLYSPIFFGLQVLQSVYYKSDRLRESFVAICRDKDVQGITFDSYLYKKMVP 362
Query: 431 GNPLEDLKLAVNTIGSLVRAN 451
+K+ + L + +
Sbjct: 363 APWSVQMKIMAKNVYHLAKGS 383
>gi|78188019|ref|YP_378357.1| geranylgeranyl reductase [Chlorobium chlorochromatii CaD3]
gi|78170218|gb|ABB27314.1| Geranylgeranyl reductase [Chlorobium chlorochromatii CaD3]
Length = 380
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 163/401 (40%), Positives = 237/401 (59%), Gaps = 27/401 (6%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
VAVIGGGP+G AA LA+ G L+ER LDN KPCGGAIPL ++ EF++P +++++K+
Sbjct: 5 VAVIGGGPSGAVAAAMLARAGFSVVLLERNLDNVKPCGGAIPLGLIEEFNIPAELVEKKL 64
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPR 172
T+MK SP +D+ P+ Y+GMVRRE D YLRE AE+ GA+V+ GL +
Sbjct: 65 TRMKARSPKGRVIDMHM---PNGYVGMVRREKFDRYLREEAERAGATVVEGLVSSIT--- 118
Query: 173 NFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDY-AIAFQER 231
+ +VL K + L+ +IGADGANS+ A + + IA Q+R
Sbjct: 119 SNGDAFVL--------KTLNDKVAPLQARRIIGADGANSKTADELRFPPNELKVIAMQQR 170
Query: 232 VKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRN 291
+ + ++ E++ +VSPDFYGW+FPK DH+A+GTGT K +IK Q
Sbjct: 171 FHY-TPSIEKFSDIVEIWFDGEVSPDFYGWIFPKADHLAIGTGTEDRKHNIKALQ----K 225
Query: 292 RAKDKI-LGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRM 350
R +KI + K EA IP PR + LVGDAAG VT +GEGI+FA +SG++
Sbjct: 226 RFVEKIGITDKPYLDEAAKIPMKPRRSFTQEKAILVGDAAGLVTPANGEGIFFAMRSGKL 285
Query: 351 CAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMC 410
A+A+IE + G L Y +++ K Y P + L+VLQ +YR++ RE+FV +C
Sbjct: 286 GAQAMIEHLKQGK------PLSNYEQEFRKLYAPIFFGLEVLQVAYYRNDRLRESFVAIC 339
Query: 411 ADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRAN 451
AD+ VQ++TFDSYLYK+++P +K+ I L++ +
Sbjct: 340 ADDDVQRITFDSYLYKKMIPAPWSVQMKIFGKNIYHLIKGS 380
>gi|189499023|ref|YP_001958493.1| geranylgeranyl reductase [Chlorobium phaeobacteroides BS1]
gi|189494464|gb|ACE03012.1| geranylgeranyl reductase [Chlorobium phaeobacteroides BS1]
Length = 379
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 161/401 (40%), Positives = 238/401 (59%), Gaps = 28/401 (6%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
VAV+GGGP+G AA LAK G+ T LIER L+N KPCGGAIPL ++ EF +P ++++K+
Sbjct: 5 VAVVGGGPSGAVAAAELAKAGISTALIERNLENVKPCGGAIPLGLIEEFGIPEALVEKKL 64
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPR 172
++M + SP+ + + P+ Y+GMVRRE D+YLR+RA+++G+ VI +M
Sbjct: 65 SRMSVRSPAGRMIFMEM---PNGYVGMVRRERFDSYLRDRAKRHGSEVIEA---RMKEIS 118
Query: 173 NFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDY-AIAFQER 231
Y + ++ E +E +IGADGANSR A+ + + IA Q+R
Sbjct: 119 RSGDTYTITLSK---------EHPPVEASYIIGADGANSRTAEVLGFPQNELQVIAMQQR 169
Query: 232 VKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRN 291
D + YE+L E++ DVSPDFYGW+FPK DH+A+GTGT K ++++ Q +
Sbjct: 170 FHYSD-TLKPYEDLVEIWFDGDVSPDFYGWIFPKTDHIAIGTGTEFRKHNLRELQ----D 224
Query: 292 RAKDKI-LGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRM 350
R KI + K EA IP PR LVGDAAG VT +GEGI+FA +SG++
Sbjct: 225 RFVQKIGISEKPYLDEAAKIPMKPRKSFTQDNAILVGDAAGLVTPANGEGIFFAMRSGKL 284
Query: 351 CAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMC 410
AEA+I+ R+ + L+ Y + + K Y P + L LQ V+Y+++ RE+FV +C
Sbjct: 285 GAEAMID------RIRNNKPLKIYEKTFRKLYAPIFFGLQTLQSVYYKNDRLRESFVAIC 338
Query: 411 ADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRAN 451
D VQ++TFDSYLYK++VP +K+ + I L + +
Sbjct: 339 EDRDVQRITFDSYLYKKMVPAPWSVQMKIFMKNIYHLAKGS 379
>gi|189345580|ref|YP_001942109.1| geranylgeranyl reductase [Chlorobium limicola DSM 245]
gi|189339727|gb|ACD89130.1| geranylgeranyl reductase [Chlorobium limicola DSM 245]
Length = 380
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/401 (40%), Positives = 238/401 (59%), Gaps = 27/401 (6%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
VAVIGGGP+G AA LA G+ET L+ER LDN KPCGGAIPL ++ EF+LP +++++K+
Sbjct: 5 VAVIGGGPSGAVAAAILAHAGLETVLVERNLDNVKPCGGAIPLGLIEEFNLPAELVEKKL 64
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPR 172
+ M+ SP + + P+ Y+GMVRRE D YLR+ A K+G V+ GL ++
Sbjct: 65 SHMRARSPKGRVIGMHM---PNGYVGMVRRERFDRYLRDEAGKSGCEVMEGLVSSIER-- 119
Query: 173 NFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDY-AIAFQER 231
+ + T D +E +IGADGANS+ A ++ + IA Q+R
Sbjct: 120 --QGDAFIIKTLNDKLP-------PIEARYIIGADGANSKTADQLHFPPNELKVIAMQQR 170
Query: 232 VKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRN 291
+ + + ++ E++ +VSPDFYGW+FPK DH+A+GTGT +K +IK Q
Sbjct: 171 FRY-TPAIQEFSDIVEIWFDGEVSPDFYGWIFPKADHLAIGTGTEDNKHNIKALQ----K 225
Query: 292 RAKDKI-LGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRM 350
R +KI + EA IP PR R L+GDAAG VT +GEGI+FA +SG++
Sbjct: 226 RFVEKIGIAASPYLDEAAKIPMKPRRSFTGDRAILIGDAAGLVTPANGEGIFFAMRSGKL 285
Query: 351 CAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMC 410
A A+I+ +NG+ L Y +++ K Y P + L+VLQ V+YR++ RE+FV +C
Sbjct: 286 GALAMIDHIKNGS------PLALYEKEFRKLYAPIFFGLEVLQSVYYRNDRLRESFVAIC 339
Query: 411 ADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRAN 451
AD+ VQ++TFDSYLYK++VP +K+ I L++ +
Sbjct: 340 ADDDVQRITFDSYLYKKMVPAPWSVQMKIFSKNIYHLLKGS 380
>gi|194335209|ref|YP_002017003.1| geranylgeranyl reductase [Pelodictyon phaeoclathratiforme BU-1]
gi|194307686|gb|ACF42386.1| geranylgeranyl reductase [Pelodictyon phaeoclathratiforme BU-1]
Length = 380
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 161/401 (40%), Positives = 234/401 (58%), Gaps = 31/401 (7%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
VAVIGGGP+G AA LAK G+ T LIER LDN KPCGGAIPL ++ EF +P ++I++K+
Sbjct: 5 VAVIGGGPSGAVAAAVLAKAGISTVLIERNLDNVKPCGGAIPLGLIEEFQIPAELIEKKL 64
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPR 172
++M+ SP +++ P+ Y+GMVRRE D YLR AE+ GA ++ GL +
Sbjct: 65 SRMRARSPKGRIIEMHM---PNGYVGMVRREKFDRYLRSEAERAGAVIVEGLVKSIS--- 118
Query: 173 NFEQPYVLYYTEYDGTKGGVGEKRT--LEVDAVIGADGANSRVAKSINAGDYDY-AIAFQ 229
DG + L +IGADGANS+ A ++ + IA Q
Sbjct: 119 ----------HSGDGFVINTLNDKVAPLRARKIIGADGANSKTADELHFPLNELKVIAMQ 168
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLAT 289
+R K + + ++ E++ +VSPDFYGW+FPK DH+A+GTGT + ++K Q
Sbjct: 169 QRFKY-TPAIQKFSDIVEIWFDGEVSPDFYGWIFPKADHLAIGTGTEDKRHNLKALQ--- 224
Query: 290 RNRAKDKI-LGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
R +KI + EA IP PR + LVGDAAG VT +GEGI+FA +SG
Sbjct: 225 -KRFIEKIGITDAPYLDEAAKIPMKPRKSFTQEKAILVGDAAGLVTPANGEGIFFAMRSG 283
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
++ A+A+IE +N T L+ Y +++ K Y P + L+VLQ +YR++ RE+FV
Sbjct: 284 KLGAQAMIEHIKNKT------PLQNYEKEFRKLYAPIFFGLEVLQAAYYRNDRLRESFVA 337
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVR 449
+CAD+ VQ++TFDSYLYK++VP +K+ I L++
Sbjct: 338 ICADDDVQQITFDSYLYKKMVPAPWSTQMKIFSKNIYHLIK 378
>gi|119355894|ref|YP_910538.1| geranylgeranyl reductase [Chlorobium phaeobacteroides DSM 266]
gi|119353243|gb|ABL64114.1| geranylgeranyl reductase [Chlorobium phaeobacteroides DSM 266]
Length = 380
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 159/402 (39%), Positives = 234/402 (58%), Gaps = 29/402 (7%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
VAVIGGGP+G AA LA+ G+ T LIER LD+ KPCGGAIPL ++ EF +P +++++K+
Sbjct: 5 VAVIGGGPSGAVAAAELARAGIPTVLIERNLDHVKPCGGAIPLGLIEEFGIPGELVEKKL 64
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPR 172
+ M+ SP +++ P+ Y+GMVRRE D YLR AE+ GA ++ GL
Sbjct: 65 SHMRARSPKGRIIEMNM---PNGYVGMVRREKFDRYLRSEAERAGAVIVEGLVN------ 115
Query: 173 NFEQPYVLYYTEYDGTKGGVGEK-RTLEVDAVIGADGANSRVAKSINAGDYDY-AIAFQE 230
+ + + T + +K +E +IGADGANS+ A + + IA Q+
Sbjct: 116 ------TIRRSSFGFTISTLNDKVPPIEAHYIIGADGANSKTADELRFPPNELKVIAMQQ 169
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATR 290
R K E + + ++ E++ +VSPDFYGW+FPK DH+A+GTGT + IK+ Q
Sbjct: 170 RFKYTPE-LEQFRDIVEIWFDGEVSPDFYGWIFPKADHLAIGTGTEDRRHSIKELQ---- 224
Query: 291 NRAKDKI-LGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R +KI + EA IP PR + LVGDAAG VT +GEGI+FA +SG+
Sbjct: 225 KRFIEKIGITEAPYLDEAAKIPMKPRKSFTAEGAILVGDAAGLVTPANGEGIFFAMRSGK 284
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
+ A+A+I ++ L Y + K Y P + L+VLQ V+YR++ RE+FV +
Sbjct: 285 LAAQAMIGHLKHAE------PLENYETGFRKLYAPIFFGLEVLQYVYYRNDRLRESFVAI 338
Query: 410 CADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRAN 451
CAD+ VQ++TFDSYLYK++VP +K+ I LV+ +
Sbjct: 339 CADDDVQQITFDSYLYKKMVPAPWSTQMKIFSKNIYHLVKGS 380
>gi|193214982|ref|YP_001996181.1| geranylgeranyl reductase [Chloroherpeton thalassium ATCC 35110]
gi|193088459|gb|ACF13734.1| geranylgeranyl reductase [Chloroherpeton thalassium ATCC 35110]
Length = 383
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 156/380 (41%), Positives = 214/380 (56%), Gaps = 30/380 (7%)
Query: 73 GVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLK 132
G+ LIER +N KPCGGAIPL ++ EF +P +I++RKV M + SP +++
Sbjct: 25 GISNVLIERNFNNTKPCGGAIPLGLIEEFAIPDEIVERKVDHMAVRSPKGRVIEMHM--- 81
Query: 133 PHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGV 192
P ++GMVRRE D +LRERA +G ++ KM R + +Y D GV
Sbjct: 82 PTGFVGMVRRERFDRFLRERAAADGTELLEA---KM---RKVRKTNGVYQISVDAASKGV 135
Query: 193 GEKRTLEVDAVIGADGANSRVAKSINAGDYDY-AIAFQERVKIPDEKMVYYENLAEMYVG 251
E +E VIGADGANS+VA + +Y AIA QER + Y NL E++
Sbjct: 136 SE---IEAKYVIGADGANSKVANELGFPPNEYKAIAIQERFHY-SPALERYNNLVEIWFD 191
Query: 252 DDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKI-LGGKIIRVEAHPI 310
+VSPDFYGW+FPK DHVA+GTGT G+I+K Q R ++KI L + EA +
Sbjct: 192 GEVSPDFYGWIFPKADHVAIGTGTDDKHGNIRKLQA----RFREKIGLDIEPYLEEAAKL 247
Query: 311 PEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI---IEGSENGTRMID 367
P HPR LVGDAAG VT +GEGI+FA +SG+M + + I G E
Sbjct: 248 PMHPRKSFTQESAMLVGDAAGLVTPSNGEGIFFAMRSGKMAGQTLANFINGQEK------ 301
Query: 368 EGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKR 427
L Y + K Y +K L ++Q V+YR++ RE+FV +C DE+VQ++TFDSYLYK+
Sbjct: 302 --SLHAYEANFHKLYKIIFKGLGMMQSVYYRNDRLRESFVAICRDEHVQQITFDSYLYKK 359
Query: 428 VVPGNPLEDLKLAVNTIGSL 447
+VP +K+ I L
Sbjct: 360 MVPAPFWVQMKIMAKNIYHL 379
>gi|145218842|ref|YP_001129551.1| geranylgeranyl reductase [Chlorobium phaeovibrioides DSM 265]
gi|145205006|gb|ABP36049.1| geranylgeranyl reductase [Chlorobium phaeovibrioides DSM 265]
Length = 380
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 159/400 (39%), Positives = 234/400 (58%), Gaps = 27/400 (6%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
AVIGGGP+G AA LA+ G+ L+ER L+N KPCGGAIPL ++ EF +P +++++K+
Sbjct: 5 TAVIGGGPSGAVAAAELARAGLSVILLERNLENIKPCGGAIPLGLIEEFSIPDELVEKKL 64
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPR 172
++M+ SP +++ + P+ ++GMVRRE D +LR AEK GA V GL M +P
Sbjct: 65 SRMRARSPKGRTIEM---VMPNGFVGMVRREKFDHWLRSEAEKAGAEVREGL-MSSIMPT 120
Query: 173 NFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDY-AIAFQER 231
+ L T D E +IGADGANS+ A+ ++ + IA Q+R
Sbjct: 121 D---DGYLITTLNDKIP-------PFEARHIIGADGANSKTAEELSFPQNELKVIAMQQR 170
Query: 232 VKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRN 291
+ + + E++ +VSPDFYGW+FPK DH+A+GTGT ++ IK Q R
Sbjct: 171 FHY-TPSIERFRTMVEIWFDGEVSPDFYGWIFPKADHLAIGTGTEDNRHSIKGLQ--KRF 227
Query: 292 RAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMC 351
K I + EA IP PR S + LVGDAAG VT +GEGI+FA +SG++
Sbjct: 228 VEKIGITDAPFLE-EAAKIPMKPRKSFSSAKNILVGDAAGLVTPANGEGIFFAMRSGKLG 286
Query: 352 AEAIIEGSENGTRMIDEG-DLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMC 410
A+A+I R I EG L++Y +++ + Y P + L+VLQ V+Y+++ RE+FV +C
Sbjct: 287 AQAMI-------RHIREGAPLQEYEKEFRRLYAPIFFGLEVLQSVYYKTDRLRESFVAIC 339
Query: 411 ADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRA 450
AD VQ +TFDSYLYK++VP +K+ I L++
Sbjct: 340 ADRDVQNITFDSYLYKKMVPAKWGVQMKIFSKNIYHLIKG 379
>gi|78185908|ref|YP_373951.1| geranylgeranyl reductase [Chlorobium luteolum DSM 273]
gi|78165810|gb|ABB22908.1| Geranylgeranyl reductase [Chlorobium luteolum DSM 273]
Length = 380
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 162/400 (40%), Positives = 234/400 (58%), Gaps = 29/400 (7%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
VAVIGGGP+G AA LAK G+ T L+ER L+N KPCGGAIPL ++ EF +P +++++K+
Sbjct: 5 VAVIGGGPSGAVAAAVLAKAGLSTILLERNLENVKPCGGAIPLGLIEEFSIPPELVEKKL 64
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPR 172
+ M+ SP +++ P+ Y+GMVRRE D +LR AEK GA V+ GL MD
Sbjct: 65 SHMRARSPKGRTIEMHM---PNGYVGMVRREKFDRWLRSEAEKAGAVVMEGL---MD--- 115
Query: 173 NFEQPYVLYYTEYDGTKGGVGEK-RTLEVDAVIGADGANSRVAKSINAGDYDY-AIAFQE 230
L T +G K E +IGADGANS+ A + + IA Q+
Sbjct: 116 ------SLMPTGEGWLISTLGNKVEPFEATHIIGADGANSKTADELGFPPNELKVIAMQQ 169
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATR 290
R E + + ++ E++ +VSPDFYGW+FPK DH+A+GTGT K IK Q
Sbjct: 170 RFHYTPE-IEKFRDIVEIWFDGEVSPDFYGWIFPKADHLAIGTGTEDRKHSIKALQ---- 224
Query: 291 NRAKDKI-LGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R +KI + + EA IP PR + + LVGDAAG VT +GEGI+FA +SG+
Sbjct: 225 KRFVEKIGIKTESYLDEAAKIPMKPRKMFAAEKNILVGDAAGLVTPANGEGIFFAMRSGK 284
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
+ AEA++ ++G L Y +++ K Y P + L+ LQ ++YR++ RE+FV +
Sbjct: 285 LGAEAMVRHIKSGA------PLSAYEQEFRKLYQPIFFGLEALQAIYYRNDRLRESFVAI 338
Query: 410 CADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVR 449
CAD+ VQ++TFDSYLYK++VP +K+ I L++
Sbjct: 339 CADDDVQRITFDSYLYKKMVPAPWSVQMKIFSKNIYHLLK 378
>gi|291168935|gb|ADD81873.1| geranylgeranyl reductase [Heptacodium miconioides]
gi|291168937|gb|ADD81874.1| geranylgeranyl reductase [Heptacodium miconioides]
Length = 145
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 118/144 (81%), Positives = 133/144 (92%)
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+VTKMKMISPSNVAVDIGQTLKPHEYIGMVRRE+LDAYLR+RA +GA+VINGLF+KMD
Sbjct: 1 RRVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREILDAYLRDRAAASGATVINGLFLKMD 60
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
PR+ PYVL+YT YD GG+G+KRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQ
Sbjct: 61 KPRDKTSPYVLHYTGYDAKIGGMGQKRTLEVDAVIGADGANSRVAKSISAGDYEYAIAFQ 120
Query: 230 ERVKIPDEKMVYYENLAEMYVGDD 253
ER+KIPD+KM YYENLAEMYVGD+
Sbjct: 121 ERIKIPDDKMQYYENLAEMYVGDE 144
>gi|291168899|gb|ADD81856.1| geranylgeranyl reductase [Symphoricarpos oreophilus]
gi|291168915|gb|ADD81864.1| geranylgeranyl reductase [Symphoricarpos palmeri]
Length = 145
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/144 (81%), Positives = 130/144 (90%)
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+VTKMKMISPSNVAVDIGQTLKPHEYIGMVRRE+LDAYLR+RA GA+VINGLF+KMD
Sbjct: 1 RRVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREILDAYLRDRAAGAGATVINGLFLKMD 60
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P + PYVL+YT YD G+GEKRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQ
Sbjct: 61 KPSDKTSPYVLHYTGYDAKTSGMGEKRTLEVDAVIGADGANSRVAKSISAGDYEYAIAFQ 120
Query: 230 ERVKIPDEKMVYYENLAEMYVGDD 253
ER+KIPDEKM YYENLAEMYVGD+
Sbjct: 121 ERIKIPDEKMQYYENLAEMYVGDE 144
>gi|291168923|gb|ADD81868.1| geranylgeranyl reductase [Leycesteria formosa]
Length = 145
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 118/144 (81%), Positives = 130/144 (90%)
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+VTKMKMISPSNVAVDIGQTLKPHEYIGMVRRE+LDAYLRERA GA+VINGLF+KMD
Sbjct: 1 RRVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREILDAYLRERAAGAGATVINGLFLKMD 60
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P + PYVL+YT YD G+GEKRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQ
Sbjct: 61 KPGDKTSPYVLHYTGYDAKTSGMGEKRTLEVDAVIGADGANSRVAKSISAGDYEYAIAFQ 120
Query: 230 ERVKIPDEKMVYYENLAEMYVGDD 253
ER+KIP+EKM YYENLAEMYVGD+
Sbjct: 121 ERIKIPEEKMQYYENLAEMYVGDE 144
>gi|291168871|gb|ADD81844.1| geranylgeranyl reductase [Symphoricarpos albus]
gi|291168877|gb|ADD81847.1| geranylgeranyl reductase [Symphoricarpos rotundifolius]
gi|291168887|gb|ADD81851.1| geranylgeranyl reductase [Symphoricarpos microphyllus]
Length = 145
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 117/144 (81%), Positives = 130/144 (90%)
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+VTKMKMISPSNVAVDIGQTLKPHEYIGMVRRE+LD+YLR+RA GA+VINGLF+KMD
Sbjct: 1 RRVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREILDSYLRDRAAGAGATVINGLFLKMD 60
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P + PYVL+YT YD G+GEKRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQ
Sbjct: 61 KPSDKTSPYVLHYTGYDAKTSGMGEKRTLEVDAVIGADGANSRVAKSISAGDYEYAIAFQ 120
Query: 230 ERVKIPDEKMVYYENLAEMYVGDD 253
ER+KIPDEKM YYENLAEMYVGD+
Sbjct: 121 ERIKIPDEKMQYYENLAEMYVGDE 144
>gi|291168882|gb|ADD81849.1| geranylgeranyl reductase [Symphoricarpos occidentalis]
gi|291168903|gb|ADD81858.1| geranylgeranyl reductase [Symphoricarpos orbiculatus]
gi|291168907|gb|ADD81860.1| geranylgeranyl reductase [Symphoricarpos orbiculatus]
gi|291168911|gb|ADD81862.1| geranylgeranyl reductase [Symphoricarpos orbiculatus]
Length = 145
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/144 (81%), Positives = 130/144 (90%)
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+VTKMKMISPSNVAVDIGQTLKPHEYIGMVRRE+LDAYLR+RA GA+VINGLF+KMD
Sbjct: 1 RRVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREILDAYLRDRAAGAGATVINGLFLKMD 60
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P + PYVL+YT YD G+G+KRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQ
Sbjct: 61 KPSDKTSPYVLHYTGYDAKTSGMGDKRTLEVDAVIGADGANSRVAKSISAGDYEYAIAFQ 120
Query: 230 ERVKIPDEKMVYYENLAEMYVGDD 253
ER+KIPDEKM YYENLAEMYVGD+
Sbjct: 121 ERIKIPDEKMQYYENLAEMYVGDE 144
>gi|291168867|gb|ADD81842.1| geranylgeranyl reductase [Symphoricarpos albus]
Length = 145
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/144 (81%), Positives = 129/144 (89%)
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+VTKMKMISPSNVAVDIGQTLKPHEYIGMVRRE+LD YLR+RA GA+VINGLF+KMD
Sbjct: 1 RRVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREILDXYLRDRAAGAGATVINGLFLKMD 60
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P + PYVL+YT YD G+GEKRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQ
Sbjct: 61 KPSDKTSPYVLHYTGYDAKTSGMGEKRTLEVDAVIGADGANSRVAKSISAGDYEYAIAFQ 120
Query: 230 ERVKIPDEKMVYYENLAEMYVGDD 253
ER+KIPDEKM YYENLAEMYVGD+
Sbjct: 121 ERIKIPDEKMQYYENLAEMYVGDE 144
>gi|291168889|gb|ADD81852.1| geranylgeranyl reductase [Symphoricarpos longiflorus]
gi|291168891|gb|ADD81853.1| geranylgeranyl reductase [Symphoricarpos longiflorus]
Length = 145
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/144 (80%), Positives = 130/144 (90%)
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+VTKMKMISPSNVAVDIGQTLKPHEYIGMVRRE+LD+YLR+RA GA+VING+F+KMD
Sbjct: 1 RRVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREILDSYLRDRAAGAGATVINGIFLKMD 60
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P + PYVL+YT YD G+GEKRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQ
Sbjct: 61 KPSDKTSPYVLHYTGYDAKTSGMGEKRTLEVDAVIGADGANSRVAKSISAGDYEYAIAFQ 120
Query: 230 ERVKIPDEKMVYYENLAEMYVGDD 253
ER+KIPDEKM YYENLAEMYVGD+
Sbjct: 121 ERIKIPDEKMQYYENLAEMYVGDE 144
>gi|291168895|gb|ADD81854.1| geranylgeranyl reductase [Symphoricarpos oreophilus]
Length = 145
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/144 (81%), Positives = 129/144 (89%)
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+VTKMKMISPSNVAVDI QTLKPHEYIGMVRRE+LDAYLR+RA GA+VINGLF+KMD
Sbjct: 1 RRVTKMKMISPSNVAVDIVQTLKPHEYIGMVRREILDAYLRDRAASAGATVINGLFLKMD 60
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P + PYVL+YT YD G+GEKRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQ
Sbjct: 61 KPSDKTSPYVLHYTGYDAKTSGMGEKRTLEVDAVIGADGANSRVAKSISAGDYEYAIAFQ 120
Query: 230 ERVKIPDEKMVYYENLAEMYVGDD 253
ER+KIPDEKM YYENLAEMYVGD+
Sbjct: 121 ERIKIPDEKMQYYENLAEMYVGDE 144
>gi|291168897|gb|ADD81855.1| geranylgeranyl reductase [Symphoricarpos oreophilus]
Length = 145
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/144 (80%), Positives = 130/144 (90%)
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+VTKMKMISPSNVAVDIGQTLKPHEYIGMVRRE+LD+YLR+RA GA+VINGLF+KMD
Sbjct: 1 RRVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREILDSYLRDRAAGAGATVINGLFLKMD 60
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P + PYVL+YT YD G+G+KRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQ
Sbjct: 61 KPSDKTSPYVLHYTGYDAKTSGMGDKRTLEVDAVIGADGANSRVAKSISAGDYEYAIAFQ 120
Query: 230 ERVKIPDEKMVYYENLAEMYVGDD 253
ER+KIPDEKM YYENLAEMYVGD+
Sbjct: 121 ERIKIPDEKMQYYENLAEMYVGDE 144
>gi|291168869|gb|ADD81843.1| geranylgeranyl reductase [Symphoricarpos albus]
Length = 145
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 116/144 (80%), Positives = 129/144 (89%)
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+VTKMKMISPSNVAVDIGQTLKPHEY GMVRRE+LD+YLR+RA GA+VINGLF+KMD
Sbjct: 1 RRVTKMKMISPSNVAVDIGQTLKPHEYXGMVRREILDSYLRDRAAGAGATVINGLFLKMD 60
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P + PYVL+YT YD G+GEKRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQ
Sbjct: 61 KPSDKTSPYVLHYTGYDAKTSGMGEKRTLEVDAVIGADGANSRVAKSISAGDYEYAIAFQ 120
Query: 230 ERVKIPDEKMVYYENLAEMYVGDD 253
ER+KIPDEKM YYENLAEMYVGD+
Sbjct: 121 ERIKIPDEKMQYYENLAEMYVGDE 144
>gi|291168875|gb|ADD81846.1| geranylgeranyl reductase [Symphoricarpos hesperius]
Length = 145
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 116/144 (80%), Positives = 129/144 (89%)
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+VTKMKMISPSNVAVDIGQTLKPHEYIGMVRRE+LD+YLR+RA GA+VINGLF+KMD
Sbjct: 1 RRVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREILDSYLRDRAAGAGATVINGLFLKMD 60
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P + PYVL+YT YD G+G KRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQ
Sbjct: 61 KPSDKTSPYVLHYTGYDAKTSGMGXKRTLEVDAVIGADGANSRVAKSISAGDYEYAIAFQ 120
Query: 230 ERVKIPDEKMVYYENLAEMYVGDD 253
ER+KIPDEKM YYENLAEMYVGD+
Sbjct: 121 ERIKIPDEKMQYYENLAEMYVGDE 144
>gi|21328656|gb|AAM48662.1| geranylgeranyl bacteriochlorophyll reductase [uncultured marine
proteobacterium]
Length = 392
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 158/402 (39%), Positives = 217/402 (53%), Gaps = 25/402 (6%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V VIGGGP+G AAE LA++G L++R+ KPCGGAIP ++ +F +P I ++
Sbjct: 4 VVVIGGGPSGATAAEDLARSGHHVALLDRE-GRIKPCGGAIPPRLIEDFAIPSSQIVARI 62
Query: 113 TKMKMISPSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+MISP+ VDI P E ++GMV RE D +LR RA+ GA+ + G F++++
Sbjct: 63 NTARMISPTQRKVDI-----PIENGFVGMVDREHFDPFLRRRAQGAGATWLTGTFLRIE- 116
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS--INAGDYDYAIAF 228
R+ + P V+Y + G E+R L +IGADGA S+VAKS N Y IA+
Sbjct: 117 -RDADHPTVIYRDKDSG------EERRLACKVIIGADGARSKVAKSEVPNGDKIPYVIAY 169
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLA 288
E ++ P E M Y ++ +SPDFYGWVFP +VG GT D+KK
Sbjct: 170 HEIIEAPLEGMSYDPKRCDVIYDGAISPDFYGWVFPHGKSASVGMGTGIEGVDLKK--AT 227
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKS 347
RA + K IR E PIP P +G V L GDAAG V SGEGIY+A
Sbjct: 228 AELRAAHGLSDCKTIRREGAPIPLRPLDCWDNGTDVVLAGDAAGVVAPSSGEGIYYAMVG 287
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GR+ A A G R D RK + K+ +KVL +Q +YRS+ RE FV
Sbjct: 288 GRVAATAASAFLTTG-RAKDLQLARKLFMREHKS---VFKVLGAMQNAYYRSDERRERFV 343
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVR 449
+C D VQK+TF++Y+ KR+V P+ LK+ + + L R
Sbjct: 344 SLCHDIDVQKLTFEAYMNKRLVAARPMAHLKIGLKNLAHLXR 385
>gi|291168865|gb|ADD81841.1| geranylgeranyl reductase [Symphoricarpos albus]
Length = 145
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 115/144 (79%), Positives = 130/144 (90%)
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R++TKMKMISPSNVAVDIGQTLKPHEYIGMVRRE+LD+YLR+RA GA+VINGLF+KMD
Sbjct: 1 RRLTKMKMISPSNVAVDIGQTLKPHEYIGMVRREILDSYLRDRAAGAGATVINGLFLKMD 60
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P + PYVL+YT YD G+G+KRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQ
Sbjct: 61 KPSDKTSPYVLHYTGYDAKTSGMGDKRTLEVDAVIGADGANSRVAKSISAGDYEYAIAFQ 120
Query: 230 ERVKIPDEKMVYYENLAEMYVGDD 253
ER+KIPDEKM YYENLAEMYVGD+
Sbjct: 121 ERIKIPDEKMQYYENLAEMYVGDE 144
>gi|291168873|gb|ADD81845.1| geranylgeranyl reductase [Symphoricarpos albus]
Length = 145
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 116/144 (80%), Positives = 129/144 (89%)
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+VTKMKMISPSNVAV IGQTLKPHEYIGMVRRE+LD+YLR+RA GA+VINGLF+KMD
Sbjct: 1 RRVTKMKMISPSNVAVAIGQTLKPHEYIGMVRREILDSYLRDRAAGAGATVINGLFLKMD 60
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P + PYVL+YT YD G+GEKRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQ
Sbjct: 61 KPSDKTSPYVLHYTGYDAKTSGMGEKRTLEVDAVIGADGANSRVAKSISAGDYEYAIAFQ 120
Query: 230 ERVKIPDEKMVYYENLAEMYVGDD 253
ER+KIPDEKM YYENLAEMYVGD+
Sbjct: 121 ERIKIPDEKMQYYENLAEMYVGDE 144
>gi|291168909|gb|ADD81861.1| geranylgeranyl reductase [Symphoricarpos orbiculatus]
Length = 145
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 116/144 (80%), Positives = 129/144 (89%)
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+VTKMKMISPSNVAVDIGQTLKPHEYIGMVRRE+LDAYLR+RA GA+VINGLF+KMD
Sbjct: 1 RRVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREILDAYLRDRAAGAGATVINGLFLKMD 60
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P + PYVL+YT YD G+G+KRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQ
Sbjct: 61 KPSDKTSPYVLHYTGYDAKTSGMGDKRTLEVDAVIGADGANSRVAKSISAGDYEYAIAFQ 120
Query: 230 ERVKIPDEKMVYYENLAEMYVGDD 253
ER+KIPDEK YYENLAEMYVGD+
Sbjct: 121 ERIKIPDEKXQYYENLAEMYVGDE 144
>gi|291168863|gb|ADD81840.1| geranylgeranyl reductase [Symphoricarpos albus]
Length = 145
Score = 240 bits (613), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 115/144 (79%), Positives = 129/144 (89%)
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+V KMKMISPSNVAVDIGQTLKPHEYIGMVRRE+LD+YLR+RA GA+VINGLF+KMD
Sbjct: 1 RRVNKMKMISPSNVAVDIGQTLKPHEYIGMVRREILDSYLRDRAAGAGATVINGLFLKMD 60
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P + PYVL+YT YD G+G+KRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQ
Sbjct: 61 KPSDKTSPYVLHYTGYDAKTSGMGDKRTLEVDAVIGADGANSRVAKSISAGDYEYAIAFQ 120
Query: 230 ERVKIPDEKMVYYENLAEMYVGDD 253
ER+KIPDEKM YYENLAEMYVGD+
Sbjct: 121 ERIKIPDEKMQYYENLAEMYVGDE 144
>gi|291168913|gb|ADD81863.1| geranylgeranyl reductase [Symphoricarpos orbiculatus]
Length = 145
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 116/144 (80%), Positives = 128/144 (88%)
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R VTKMKMISPSNVAVDIGQTLKPHEYIGMVRRE+LDAYLR+RA GA+VINGLF+KMD
Sbjct: 1 RGVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREILDAYLRDRAAGAGATVINGLFLKMD 60
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P + PYVL+Y YD G+G+KRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQ
Sbjct: 61 KPSDKTSPYVLHYPGYDAKTSGMGDKRTLEVDAVIGADGANSRVAKSISAGDYEYAIAFQ 120
Query: 230 ERVKIPDEKMVYYENLAEMYVGDD 253
ER+KIPDEKM YYENLAEMYVGD+
Sbjct: 121 ERIKIPDEKMQYYENLAEMYVGDE 144
>gi|119504101|ref|ZP_01626182.1| geranylgeranyl reductase [marine gamma proteobacterium HTCC2080]
gi|40063464|gb|AAR38264.1| bacteriochlorophyll reductase [uncultured marine bacterium 581]
gi|119460104|gb|EAW41198.1| geranylgeranyl reductase [marine gamma proteobacterium HTCC2080]
Length = 397
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 150/409 (36%), Positives = 234/409 (57%), Gaps = 24/409 (5%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPL 105
++N + V VIGGGP+G +AAE LAK L+ER KPCGGAIP C++ EF++P
Sbjct: 1 MSNTDYDVVVIGGGPSGASAAEHLAKQNYRVLLLERAF-RIKPCGGAIPPCLIDEFEIPE 59
Query: 106 DIIDRKVTKMKMISPSNVAVD--IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVING 163
D++ ++ +MISP+ VD +G+T ++GMV R+V D +LRERA GA + G
Sbjct: 60 DLLVARIRSARMISPTEKKVDMPVGET-----FVGMVDRDVFDPWLRERAVTAGAELRIG 114
Query: 164 LFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGD 221
F + +++ VL+ ++ + G+ E ++ +VIGADGA S VA+ + +
Sbjct: 115 AFKAL----HYDDDGVLH-IDFQSKEAGL-ENVSVTTRSVIGADGARSNVARQAIPCSKN 168
Query: 222 YDYAIAFQERVKIPDEKMVYYE-NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKG 280
+ +A+ E V+ P Y+ + +++ D+SPDFY WVFP H ++G G+ T G
Sbjct: 169 ARWVLAYHEIVEAPAANDELYDGDRCDVWYQGDLSPDFYAWVFPHGRHASIGVGSET-DG 227
Query: 281 DIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGE 339
+ +AT RAK + + +R E PIP P R G+ V L GDAAG V SGE
Sbjct: 228 FSARNSVATL-RAKTGLDTCQTVRREGAPIPMKPLKRWDDGKGVLLSGDAAGVVAPASGE 286
Query: 340 GIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRS 399
GIY+A G++ A+ I E + G I R++++ KT+W L +LQ+++YRS
Sbjct: 287 GIYYAMLCGKIAAQTIDEFLQVGDARILGDARRQFMKLHGKTFW----ALGLLQRIWYRS 342
Query: 400 NPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
+ RE FV MC D+ VQ++T+ +Y K++V L++A+ IG+L+
Sbjct: 343 DKRREKFVSMCQDKDVQELTWQAYTQKQLVKRRKTAHLRVALKDIGNLI 391
>gi|18645075|gb|AAL76376.1| geranylgeranyl bacteriochlorophyll reductase [uncultured marine
proteobacterium]
Length = 397
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 149/409 (36%), Positives = 234/409 (57%), Gaps = 24/409 (5%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPL 105
++N + V VIGGGP+G +AAE LAK L+ER KPCGGAIP C++ EF++P
Sbjct: 1 MSNTDYDVVVIGGGPSGASAAEHLAKQNYRVLLLERAF-RIKPCGGAIPPCLIDEFEIPE 59
Query: 106 DIIDRKVTKMKMISPSNVAVD--IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVING 163
D++ ++ +MISP+ VD +G+T ++GMV R+V D +LRERA GA + G
Sbjct: 60 DLLVARIRSARMISPTEKKVDMPVGET-----FVGMVDRDVFDPWLRERAVTAGAELRIG 114
Query: 164 LFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGD 221
F + +++ VL+ ++ + G+ E ++ +VIGADGA S VA+ + +
Sbjct: 115 AFKAL----HYDDDGVLH-IDFQSKEAGL-ENVSVTTRSVIGADGARSNVARQAIPCSKN 168
Query: 222 YDYAIAFQERVKIPDEKMVYYE-NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKG 280
+ +A+ E V+ P Y+ + +++ D+SPDFY WVFP H ++G G+ T G
Sbjct: 169 ARWVLAYHEIVEAPAANDELYDGDRCDVWYQGDLSPDFYAWVFPHGRHASIGVGSET-DG 227
Query: 281 DIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGE 339
+ +AT RAK + + +R E PIP P R G+ + L GDAAG V SGE
Sbjct: 228 FSARNSVATL-RAKTGLDTCQTVRREGAPIPMKPLKRWDDGKGILLSGDAAGVVAPASGE 286
Query: 340 GIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRS 399
GIY+A G++ A+ I E + G I R++++ KT+W L +LQ+++YRS
Sbjct: 287 GIYYAMLCGKIAAQTIDEFLQVGDARILGDARRQFMKLHGKTFW----ALGLLQRIWYRS 342
Query: 400 NPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
+ RE FV MC D+ VQ++T+ +Y K++V L++A+ IG+L+
Sbjct: 343 DKRREKFVSMCQDKDVQELTWQAYTQKQLVKRRKTAHLRVALKDIGNLI 391
>gi|291168905|gb|ADD81859.1| geranylgeranyl reductase [Symphoricarpos orbiculatus]
Length = 145
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 115/144 (79%), Positives = 128/144 (88%)
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+VTKMKMISPSNVAVDIGQTLKPHEYIGMVRRE+LDAYLR+RA GA+VINGLF+KMD
Sbjct: 1 RRVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREILDAYLRDRAAGAGATVINGLFLKMD 60
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P + PYVL+YT YD G+G+KRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQ
Sbjct: 61 KPSDKTSPYVLHYTGYDAKTSGMGDKRTLEVDAVIGADGANSRVAKSISAGDYEYAIAFQ 120
Query: 230 ERVKIPDEKMVYYENLAEMYVGDD 253
ER+KIPDEK YENLAEMYVGD+
Sbjct: 121 ERIKIPDEKXQXYENLAEMYVGDE 144
>gi|291168919|gb|ADD81866.1| geranylgeranyl reductase [Triosteum himalayanum]
Length = 145
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 115/144 (79%), Positives = 129/144 (89%)
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+VTKMKMISPSNVAVDIGQ LKPHEYIGMVRRE+LDAYLR+RA GA+VINGLF+KMD
Sbjct: 1 RRVTKMKMISPSNVAVDIGQPLKPHEYIGMVRREILDAYLRDRAAGAGATVINGLFLKMD 60
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P + PYVL+YT YD G+GEKRTLEVDAVIGADGANSRVAKSI+AG+Y+YAIAFQ
Sbjct: 61 KPGDKTSPYVLHYTGYDAKTSGMGEKRTLEVDAVIGADGANSRVAKSISAGEYEYAIAFQ 120
Query: 230 ERVKIPDEKMVYYENLAEMYVGDD 253
ER+KIP+EKM YYENLAEMYVGD+
Sbjct: 121 ERIKIPEEKMQYYENLAEMYVGDE 144
>gi|85703496|ref|ZP_01034600.1| Geranylgeranyl hydrogenase [Roseovarius sp. 217]
gi|85672424|gb|EAQ27281.1| Geranylgeranyl hydrogenase [Roseovarius sp. 217]
Length = 394
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 152/403 (37%), Positives = 219/403 (54%), Gaps = 27/403 (6%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V VIGGGP+G AAE LA++G + L++R KPCGGAIP ++ +F LP D I K+
Sbjct: 6 VVVIGGGPSGATAAEDLARSGHKVALLDRA-GRIKPCGGAIPPRLIADFHLPDDQIVAKI 64
Query: 113 TKMKMISPSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
T +MISP+ VDI P E ++GMV RE D +LR RA + GA G ++++D
Sbjct: 65 TTARMISPTGRHVDI-----PIENGFVGMVDREEFDEFLRVRAAQAGAIRATGTYLRID- 118
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS-INAGD-YDYAIAF 228
R P V+Y + GE+R+L +IGADGA S VA++ + GD Y IA+
Sbjct: 119 -RTGTTPAVIYRDK------ATGEERSLPTRLIIGADGARSNVARAEVPGGDKIPYVIAY 171
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLA 288
E ++ P Y ++ +SPDFYGWVFP +VG G++ D+K Q
Sbjct: 172 HEIIEAPAATATYDPKRCDVIYDGAISPDFYGWVFPHGKSASVGMGSMVKGVDLK--QAT 229
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKS 347
RA + +R E PIP P +GR V L GDAAG V SGEGIY+A
Sbjct: 230 ADLRAASGLTDCPTLRREGAPIPLKPMDCWDNGRDVVLAGDAAGVVAPSSGEGIYYAMVG 289
Query: 348 GRMCAEAIIEGSENG-TRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAF 406
GR+ A A +G TR DL+ + + + + ++VL +Q +Y+S+ RE F
Sbjct: 290 GRVAATAASACLASGRTR-----DLKLARQLFMRDHKTVFRVLASMQNAYYKSDERRERF 344
Query: 407 VEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVR 449
V +C D VQ++TF++Y+ K++V P+ LK+ + + L R
Sbjct: 345 VSLCHDVDVQRLTFEAYMNKKLVRARPMAHLKIGLKNLAHLTR 387
>gi|254460516|ref|ZP_05073932.1| geranylgeranyl reductase [Rhodobacterales bacterium HTCC2083]
gi|206677105|gb|EDZ41592.1| geranylgeranyl reductase [Rhodobacteraceae bacterium HTCC2083]
Length = 392
Score = 231 bits (588), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 153/402 (38%), Positives = 219/402 (54%), Gaps = 25/402 (6%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V VIGGGP+G AAE LA++G + +I+R KPCGGAIP ++ +F +P I ++
Sbjct: 4 VVVIGGGPSGATAAEDLARSGRKVAMIDRD-GRIKPCGGAIPPRLIEDFFIPDSQIIARI 62
Query: 113 TKMKMISPSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+M+SP+ VDI P E ++GMV R+ D +LR RA++ GA + G FM+++
Sbjct: 63 NTARMVSPTQRKVDI-----PIEDGFVGMVDRKDFDPFLRNRAKEAGAQCMTGTFMRIE- 116
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS-INAGD-YDYAIAF 228
R+ + +V+Y + G E+ +L +IGADGA S+VAK+ + GD Y IA+
Sbjct: 117 -RDSDGTHVVYRDKESG------EEISLATKLIIGADGARSKVAKAEVPGGDKIPYVIAY 169
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLA 288
E ++ P Y ++ +SPDFYGWVFP +VG GT D+KK
Sbjct: 170 HEIIEAPAASHNYDPKRCDVIYDGAISPDFYGWVFPHGSSASVGMGTGIDGVDLKKATAD 229
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKS 347
R A + G K +R E PIP P +G V L GDAAG V SGEGIY+A
Sbjct: 230 LRVAAG--LEGCKTLRREGAPIPLKPMDCWDNGTDVVLAGDAAGVVAPSSGEGIYYAMLG 287
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GR+ A A E G R D RK + K+ +KVL +Q +YRS+ RE FV
Sbjct: 288 GRVAATAASACLETG-RAKDLQLARKLFMREHKS---VFKVLGAMQNAYYRSDERRERFV 343
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVR 449
+C D VQK+TF++Y+ KR++ P+ LK+ + + L R
Sbjct: 344 SLCHDVDVQKLTFEAYMNKRLIKARPMAHLKIGLKNLAHLTR 385
>gi|260574927|ref|ZP_05842929.1| geranylgeranyl reductase [Rhodobacter sp. SW2]
gi|259022932|gb|EEW26226.1| geranylgeranyl reductase [Rhodobacter sp. SW2]
Length = 399
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 151/403 (37%), Positives = 223/403 (55%), Gaps = 27/403 (6%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V VIGGGP+G AAE +A+ G + L++R KPCGGAIP ++ +F++P I K+
Sbjct: 5 VFVIGGGPSGSTAAEDIARAGRKVALLDRD-GRIKPCGGAIPPRLIADFNIPDSQIVAKI 63
Query: 113 TKMKMISPSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
T +MISP+ AVDI P E Y+GMV R+ D +LR RA + GA + G F++++
Sbjct: 64 TTARMISPTGRAVDI-----PIENGYVGMVDRDKYDEFLRNRAAEAGAERLTGTFLRIE- 117
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS-INAGD-YDYAIAF 228
R+ E +V++ + GE++ VIGADGA S VA++ + GD Y IA+
Sbjct: 118 -RDAEGTHVVWRDK------ASGEEQRSATKLVIGADGARSGVARAEVPGGDKIPYVIAY 170
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLA 288
E + P+ Y ++ +SPDFYGWVFP H ++G GT D+KK A
Sbjct: 171 HEIIVAPEASNSYDPTRCDVIYDGRISPDFYGWVFPHGKHASIGMGTGVDGVDLKK---A 227
Query: 289 TRN-RAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAK 346
T + R + + +R E PIP HP R +GR V L GDAAG V SGEGI++A
Sbjct: 228 TADLRESSGLTDCETVRREGAPIPLHPMDRWDNGRDVVLAGDAAGVVAPSSGEGIFYAMV 287
Query: 347 SGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAF 406
GR+ A A + +G DL + + K + +KVL +Q +Y+S+ RE F
Sbjct: 288 GGRVAATACLACLASGK----AADLALARKAFMKEHGTVFKVLRSMQDAYYKSDERRERF 343
Query: 407 VEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVR 449
V +C D VQ +TF++Y+ K++V P+ LK+ + + L+R
Sbjct: 344 VSLCHDVDVQTLTFEAYMNKKLVSARPMAHLKIGLKNMAHLLR 386
>gi|291168901|gb|ADD81857.1| geranylgeranyl reductase [Symphoricarpos sinensis]
Length = 145
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 113/144 (78%), Positives = 124/144 (86%)
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R VTK KM PS VAV IGQTLKPHEYIGMVRRE+LDAYLR+RA GA+VINGLF+KMD
Sbjct: 1 RGVTKRKMKLPSKVAVAIGQTLKPHEYIGMVRREILDAYLRDRAAGAGATVINGLFLKMD 60
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P + PYVL+YT YD G+GEKRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQ
Sbjct: 61 KPGDKTSPYVLHYTGYDAKTSGMGEKRTLEVDAVIGADGANSRVAKSISAGDYEYAIAFQ 120
Query: 230 ERVKIPDEKMVYYENLAEMYVGDD 253
ER+KIPDEKM YYENLAEMYVGD+
Sbjct: 121 ERIKIPDEKMQYYENLAEMYVGDE 144
>gi|149202050|ref|ZP_01879023.1| geranylgeranyl reductase [Roseovarius sp. TM1035]
gi|149144148|gb|EDM32179.1| geranylgeranyl reductase [Roseovarius sp. TM1035]
Length = 394
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 152/402 (37%), Positives = 215/402 (53%), Gaps = 25/402 (6%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V VIGGGP+G AAE LA++G + L++R KPCGGAIP ++ +F+LP I K+
Sbjct: 6 VVVIGGGPSGATAAEDLARSGYKVALLDRA-GRIKPCGGAIPPRLIADFNLPDAQIVAKI 64
Query: 113 TKMKMISPSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
T +MISP+ VDI P E ++GMV RE D +LR RA + GA G ++++D
Sbjct: 65 TTARMISPTGRHVDI-----PIENGFVGMVDREHFDEFLRVRAAQAGAVRATGTYLRID- 118
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGD--YDYAIAF 228
R+ P V+Y + G R+L +IGADGA S VA+ G Y IA+
Sbjct: 119 -RSGPTPAVIYRDKV------TGNARSLPTRLIIGADGARSSVARDEVPGAERIPYVIAY 171
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLA 288
E ++ P+ Y ++ +SPDFYGWVFP +VG G++ D+K Q
Sbjct: 172 HEIIEAPEATAAYDPKRCDVIYDGAISPDFYGWVFPHGKSASVGMGSMIKDVDLK--QAT 229
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKS 347
RA + IR E PIP P +GR V L GDAAG V SGEGIY+A
Sbjct: 230 ADLRAASGLTDCPTIRREGAPIPLKPLDCWDNGRDVGLAGDAAGVVAPSSGEGIYYAMVG 289
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GR+ A A +G R+ D R+ + KT ++VL +Q +YRS+ RE FV
Sbjct: 290 GRVAATAASACLASG-RVRDLKLARQLFMREHKT---VFRVLASMQNAYYRSDERRERFV 345
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVR 449
+C D VQ++TF++Y+ K++V P+ LK+ + + L R
Sbjct: 346 SLCHDIDVQRLTFEAYMNKKLVKARPMAHLKIGLKNLAHLTR 387
>gi|84514667|ref|ZP_01002031.1| Geranylgeranyl hydrogenase [Loktanella vestfoldensis SKA53]
gi|84511718|gb|EAQ08171.1| Geranylgeranyl hydrogenase [Loktanella vestfoldensis SKA53]
Length = 393
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 155/402 (38%), Positives = 214/402 (53%), Gaps = 25/402 (6%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V V+G GP+G AAE LA++G + I+R+ KPCGGAIP ++ +F +P D I KV
Sbjct: 5 VVVVGAGPSGATAAEDLARSGHKVAFIDRE-GRIKPCGGAIPPRLIADFFIPDDQIVAKV 63
Query: 113 TKMKMISPSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+MISP+ VDI P E Y+GMV RE D++LR+RA+ GA G F K +
Sbjct: 64 NTARMISPTGRQVDI-----PIENGYVGMVDREHFDSFLRQRAQDAGAHRYAGTFTK--I 116
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS-INAGD-YDYAIAF 228
R+ + +V+Y + G L VIGADGA S VA++ I GD Y IA+
Sbjct: 117 TRDADGTHVVYRDKISGND------MRLTTKLVIGADGARSNVARAEIKDGDKIPYVIAY 170
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLA 288
E ++ P Y ++ +SPDFYGWVFP +VG G++ D+K Q
Sbjct: 171 HEIIEAPAANATYDPLRCDVVYDGRISPDFYGWVFPHGAQASVGMGSMLKSVDVK--QAT 228
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKS 347
RA + K IR E PIP P +GR V L GDAAG V SGEGIY+A
Sbjct: 229 ADLRAASGLTDCKTIRREGAPIPLKPLDCWDNGRDVVLAGDAAGVVAPSSGEGIYYAMVG 288
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GR+ A A +G R+ D RK + K ++VL +Q +YRS+ RE FV
Sbjct: 289 GRVAATAAAACLASG-RVKDLQLARKLFMREHKQ---VFRVLGAMQNAYYRSDERRERFV 344
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVR 449
+C D VQK+TF++Y+ K++V P+ LK+ + + L R
Sbjct: 345 SLCHDVDVQKLTFEAYMNKKLVKARPMAHLKIGIKNLAHLTR 386
>gi|291168921|gb|ADD81867.1| geranylgeranyl reductase [Triosteum pinnatifidum]
Length = 145
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 111/144 (77%), Positives = 126/144 (87%)
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+ TKMK ISPS +AVDI QTLKPHEYIGMVRRE+LDAYLR+RA GA+VINGLF+KMD
Sbjct: 1 RRGTKMKKISPSKLAVDICQTLKPHEYIGMVRREILDAYLRDRAAGAGATVINGLFLKMD 60
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P + PYVL+YT YD G+GEKRTLEVDAVIGADGANSRVAKSI+AG+Y+YAIAFQ
Sbjct: 61 KPGDKTSPYVLHYTGYDAKTSGMGEKRTLEVDAVIGADGANSRVAKSISAGEYEYAIAFQ 120
Query: 230 ERVKIPDEKMVYYENLAEMYVGDD 253
ER+KIP+EKM YYENLAEMYVGD+
Sbjct: 121 ERIKIPEEKMQYYENLAEMYVGDE 144
>gi|255263398|ref|ZP_05342740.1| geranylgeranyl hydrogenase [Thalassiobium sp. R2A62]
gi|255105733|gb|EET48407.1| geranylgeranyl hydrogenase [Thalassiobium sp. R2A62]
Length = 392
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 150/403 (37%), Positives = 221/403 (54%), Gaps = 27/403 (6%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V VIGGGP+G AA+ LA++G + +I+R+ KPCGGAIP + +F +P D + KV
Sbjct: 4 VIVIGGGPSGATAAQDLARSGHKVAMIDRE-GRIKPCGGAIPPRAIEDFCIPDDQLVAKV 62
Query: 113 TKMKMISPSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+MISP+ VDI P E ++GMV R+ D +LR+RA K GA + G F++++
Sbjct: 63 NTARMISPTGRKVDI-----PIENGFVGMVDRKDFDPFLRDRAGKAGAHCLTGTFLRIN- 116
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS-INAGD-YDYAIAF 228
R Q V+Y + G ++RTL +IGADGA S+VAK+ + GD Y IA+
Sbjct: 117 -RTAGQTTVIYRDKDSG------KERTLRTKIIIGADGARSKVAKAEVPGGDKIPYVIAY 169
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLA 288
E ++ P Y ++ +SPDFYGW+FP ++G GT D+K+ A
Sbjct: 170 HEIIEAPALSADYDPLRCDVIYDGKISPDFYGWIFPHGRSASIGIGTGIEGVDLKR---A 226
Query: 289 TRN-RAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAK 346
T + RA + K +R E PIP P + +G V L GDAAG V SGEGIY+A
Sbjct: 227 TADIRAAHGLTDCKTLRREGAPIPLRPMDKWDNGTDVVLAGDAAGVVAPSSGEGIYYAML 286
Query: 347 SGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAF 406
GR+ A A G DL+ + + + + +KVL +Q +YRS+ RE F
Sbjct: 287 GGRVAATAASACIATGR----SKDLQLARKLFMREHKSVFKVLGAMQNAYYRSDERRERF 342
Query: 407 VEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVR 449
V +C D VQ++TF++Y+ KR++ P+ LK+ + + L R
Sbjct: 343 VSLCHDVDVQRLTFEAYMNKRLIKARPMAHLKIGIKNLAHLTR 385
>gi|291168917|gb|ADD81865.1| geranylgeranyl reductase [Triosteum perfoliatum]
Length = 145
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 108/141 (76%), Positives = 124/141 (87%)
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPR 172
T+M+M PS +AVDIGQTLKPHEYIGMVRRE+LDAYLR+RA GA+VINGLF+KMD P
Sbjct: 4 TQMEMFLPSKLAVDIGQTLKPHEYIGMVRREILDAYLRDRAAGAGATVINGLFLKMDKPG 63
Query: 173 NFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERV 232
+ PYVL+YT +D G+GEKRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQER+
Sbjct: 64 DKTSPYVLHYTGFDAKTSGMGEKRTLEVDAVIGADGANSRVAKSISAGDYEYAIAFQERI 123
Query: 233 KIPDEKMVYYENLAEMYVGDD 253
KIP+EKM YYENLAEMYVGD+
Sbjct: 124 KIPEEKMQYYENLAEMYVGDE 144
>gi|291168884|gb|ADD81850.1| geranylgeranyl reductase [Symphoricarpos orbiculatus]
Length = 136
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/135 (80%), Positives = 121/135 (89%)
Query: 119 SPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPY 178
SPS+VAVDIGQTLKPHEYIGMVRRE+LDAYLR+RA GA+VINGLF+KMD P + PY
Sbjct: 1 SPSHVAVDIGQTLKPHEYIGMVRREILDAYLRDRAAGAGATVINGLFLKMDKPSDKTSPY 60
Query: 179 VLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEK 238
VL+YT YD G+G+KRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQER+KIPDEK
Sbjct: 61 VLHYTGYDAKTSGMGDKRTLEVDAVIGADGANSRVAKSISAGDYEYAIAFQERIKIPDEK 120
Query: 239 MVYYENLAEMYVGDD 253
M YYENLAEMYVGD+
Sbjct: 121 MQYYENLAEMYVGDE 135
>gi|294676230|ref|YP_003576845.1| geranylgeranyl reductase [Rhodobacter capsulatus SB 1003]
gi|114852|sp|P26172.1|BCHP_RHOCB RecName: Full=Geranylgeranyl diphosphate reductase; AltName:
Full=Geranylgeranyl reductase
gi|46117|emb|CAA77534.1| 391 aa (43 kD) bacteriochlorophyll synthase subunit [Rhodobacter
capsulatus]
gi|294475050|gb|ADE84438.1| geranylgeranyl reductase [Rhodobacter capsulatus SB 1003]
Length = 391
Score = 224 bits (571), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 145/396 (36%), Positives = 212/396 (53%), Gaps = 23/396 (5%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTK 114
V+GGGPAG AA +A+ G++ L++R KPCGGAIP ++ +FD+P ++ K+T
Sbjct: 7 VVGGGPAGSTAAWDMARAGLKVALLDRA-GRIKPCGGAIPPRLIRDFDIPDHLLVAKITS 65
Query: 115 MKMISPSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPR 172
+MISP+ VDI P E ++GMV RE D +LRERA K GA + G +++++ R
Sbjct: 66 ARMISPTGRFVDI-----PIENGFVGMVDREDYDEWLRERAGKAGAERLTGTWLRIE--R 118
Query: 173 NFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERV 232
+ + V++ + GE+ E VIGADGANS+V + A A+ E +
Sbjct: 119 DSGKTVVVWRDKV------TGEEMKAETRVVIGADGANSQVRNEVPATKIPLVFAYHEII 172
Query: 233 KIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNR 292
K P Y ++Y +SPDFYGWVFP ++G G T D+ T R
Sbjct: 173 KAPTTVANYDPTRCDVYYDGRISPDFYGWVFPHGKTASIGMG--TELPDVSLKDCTTLLR 230
Query: 293 AKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMC 351
+ + IR E PIP P +G+ V L GDAAG V SGEGIY+A GR
Sbjct: 231 QMSGLDKEETIRKEGAPIPLQPLDVWDNGKDVVLSGDAAGVVAPSSGEGIYYAHAGGRYA 290
Query: 352 AEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCA 411
AEA + ++G DL+ + K + +KVL ++Q +Y S+ RE FV +C
Sbjct: 291 AEAAMAFLKSGK----PADLKLARAGFMKEHGTVFKVLRMMQDKYYHSDDRRERFVSLCH 346
Query: 412 DEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSL 447
D VQ+MTF+SY+ K++ PL++LK+ + L
Sbjct: 347 DVDVQRMTFESYMNKKMTKFQPLKNLKIGFKNLAHL 382
>gi|390950725|ref|YP_006414484.1| geranylgeranyl reductase [Thiocystis violascens DSM 198]
gi|390427294|gb|AFL74359.1| geranylgeranyl reductase family protein [Thiocystis violascens DSM
198]
Length = 413
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 143/399 (35%), Positives = 211/399 (52%), Gaps = 19/399 (4%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTK 114
VIGGGP+G AA LAK G L++R KPCGGAIP + +FD+P ++ +V
Sbjct: 11 VIGGGPSGATAATDLAKLGRTVLLLDRA-GRIKPCGGAIPPQAMRDFDIPESMLANQVNS 69
Query: 115 MKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNF 174
+M+SP++ VD+ Y+GMV RE D +LRERA GA G F +++ R+
Sbjct: 70 ARMVSPTDRTVDMPIN---GGYVGMVDREHFDEWLRERAATAGAVRRVGTFERIE--RDS 124
Query: 175 EQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGD--YDYAIAFQERV 232
+ ++ Y G E+ + AVIGADGA+S VAK G + A+ E V
Sbjct: 125 DGTALVCYRPGQGRSDNPSEQ--VRARAVIGADGAHSSVAKQCIPGSEGMKFVSAYHEIV 182
Query: 233 KIPDEKMV--YYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATR 290
+ P V + ++Y D+SPDFYGWVFP D +VG GT ++ R
Sbjct: 183 RTPPNGGVADFDGTRCDVYYQGDISPDFYGWVFPHGDTTSVGVGTAVEGFSLRSACTELR 242
Query: 291 NRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGR 349
RA + + +R E PIP P P +GR + L GDA+G V SGEGIY+A GR
Sbjct: 243 RRA--GLAEAETLRREGAPIPLEPLPCWDNGRDIVLAGDASGVVAPASGEGIYYALVGGR 300
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
+ AEA+ E G + +++++ K +W VL +LQ+ +Y S+ RE FV +
Sbjct: 301 LAAEAVAEFLTTGKASALKNARKRFMKAHGKVFW----VLGILQRFWYASDKRRERFVSL 356
Query: 410 CADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
CAD +Q +T+++Y+ KR+V P L++ + L+
Sbjct: 357 CADPDIQYLTWEAYMNKRLVKARPGAHLRIFFKDMAHLL 395
>gi|91978208|ref|YP_570867.1| geranylgeranyl reductase [Rhodopseudomonas palustris BisB5]
gi|91684664|gb|ABE40966.1| geranylgeranyl reductase [Rhodopseudomonas palustris BisB5]
Length = 400
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 151/408 (37%), Positives = 221/408 (54%), Gaps = 36/408 (8%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V V+GGGP+G AA LA+ G L++R KPCGGAIP + +F +P ++ K+
Sbjct: 10 VIVVGGGPSGATAACDLARAGKRVVLLDRA-GRIKPCGGAIPPRAIRDFAIPDSMLVAKI 68
Query: 113 TKMKMISPSNVAVD--IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+M+SPS+V VD IG ++GMV RE D +LR+RA GA GLF
Sbjct: 69 NAARMVSPSDVEVDMPIGDG-----FVGMVDREHFDEWLRKRAASVGAERRTGLFRS--F 121
Query: 171 PRNFEQPYVLYYTEY--DGTKGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGDYDYAI 226
R+ ++Y E DGT +T+ A+IGADGA S VA+ +A +
Sbjct: 122 TRDESGVNTVHYEERQPDGTM----LDQTVRARAIIGADGAVSAVARQFLPDADRAPFVF 177
Query: 227 AFQERVKIPDEKMVYYENL-AEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKF 285
A+ E +K P YE+ ++Y VSPDFYGWVFP D V+VGTG++ HKG +
Sbjct: 178 AYHEIIKAPQPGQAAYESRRCDVYYQGKVSPDFYGWVFPHGDTVSVGTGSM-HKGFSLRD 236
Query: 286 QLATRNRAK--DKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIY 342
+A +A D++ + IR E PIP HP PR G V L GDAAG V SGEGIY
Sbjct: 237 SVAELRKATGLDEV---ETIRKEGAPIPLHPLPRWDDGHSVLLAGDAAGVVAPASGEGIY 293
Query: 343 FAAKSGRMCAEAIIEGSENGTRMIDEGD---LRKYLEKWDKTYWPTYKVLDVLQKVFYRS 399
+A GR+ AEA+ E +D D L+ +++ + +++L ++Q +Y S
Sbjct: 294 YALVGGRLAAEAVGE-------FLDTADAKVLKLARKRFMRANGSVFRILGLMQWYWYAS 346
Query: 400 NPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSL 447
+ RE FV +C D VQK+T+D+Y+ K++V P+ +++ + +
Sbjct: 347 DKRREQFVSICRDRDVQKLTWDAYMNKKLVRAKPIAHVRIFFKNLAHM 394
>gi|32401312|gb|AAP80828.1| geranylgeranyl hydrogenase [Griffithsia japonica]
Length = 195
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 120/173 (69%), Positives = 141/173 (81%), Gaps = 2/173 (1%)
Query: 44 PKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDL 103
P L+ R LRVAV+GGGPAG AAETLAKNG+ET++ ERK+DNCKPCGGAIPLCMV EFDL
Sbjct: 8 PTLSMR-LRVAVVGGGPAGACAAETLAKNGIETYIFERKMDNCKPCGGAIPLCMVEEFDL 66
Query: 104 PLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVING 163
P IIDRKV KM+MISP+NV VDIG+TLKPHEYIGM RREVLDAYLR+RA GA+ ING
Sbjct: 67 PPTIIDRKVRKMRMISPTNVEVDIGKTLKPHEYIGMTRREVLDAYLRDRAVDLGATAING 126
Query: 164 LFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS 216
L K+ +P + + PY L+YT+ + K G +TLEVD VIGADGANSRVA++
Sbjct: 127 LVSKLVIPDD-DGPYTLHYTDIEAHKSGGRNTKTLEVDLVIGADGANSRVART 178
>gi|429209335|ref|ZP_19200573.1| Geranylgeranyl hydrogenase BchP [Rhodobacter sp. AKP1]
gi|428187800|gb|EKX56374.1| Geranylgeranyl hydrogenase BchP [Rhodobacter sp. AKP1]
Length = 394
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 148/403 (36%), Positives = 217/403 (53%), Gaps = 26/403 (6%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V V+GGGP+G AA+ LA+ G L++R KPCGGAIP ++ +FD+P I ++
Sbjct: 5 VFVVGGGPSGATAADELARAGKSVALLDRA-GRIKPCGGAIPPRLIEDFDIPDSQIVARI 63
Query: 113 TKMKMISPSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+MISP+ VDI P E ++GMV RE D +LR RA K GA + G F++++
Sbjct: 64 RTARMISPTGRKVDI-----PIEGGFVGMVDREHFDEWLRRRAAKAGAERLTGTFLRIE- 117
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS-INAGD-YDYAIAF 228
R+ YV++ + GE++ E VIGADGA S VA++ + GD IA+
Sbjct: 118 -RDSFHTYVVWREK------ATGEEKRSETKLVIGADGAKSDVARAEVPGGDKIPMVIAY 170
Query: 229 QERVKIPDEKMVYYE-NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQL 287
E +K P ++ Y+ ++ VSPDFYGW+FP + +VG GT D+K+
Sbjct: 171 HEIIKPPTSSVIDYDPTRCDVIYDGRVSPDFYGWIFPHGETASVGMGTGILGFDLKEATA 230
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAK 346
R +A + + IR E PIP P + +G+ V L GDAAG V SGEGIY+A
Sbjct: 231 LLRRQAG--LDQCETIRKEGAPIPLQPLEKWDNGKDVVLAGDAAGVVAPSSGEGIYYAFV 288
Query: 347 SGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAF 406
G++ A A + ++G R D RK KT +KVL +Q +YR + RE F
Sbjct: 289 GGQVAARACLAALKSG-RATDLQLARKMFMADHKT---VFKVLRSMQDAYYRDDERRERF 344
Query: 407 VEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVR 449
V +C D VQ++TF+SY+ K++ P +K+ + L R
Sbjct: 345 VSLCHDTDVQRLTFESYMNKKLTSKQPWAHIKIGFKNVMHLTR 387
>gi|77463847|ref|YP_353351.1| geranylgeranyl hydrogenase [Rhodobacter sphaeroides 2.4.1]
gi|126462682|ref|YP_001043796.1| geranylgeranyl reductase [Rhodobacter sphaeroides ATCC 17029]
gi|332558721|ref|ZP_08413043.1| geranylgeranyl reductase [Rhodobacter sphaeroides WS8N]
gi|4490583|emb|CAB38733.1| geranylgeranyl bacteriochlorophyll reductase [Rhodobacter
sphaeroides]
gi|6690715|gb|AAF24283.1| BchP [Rhodobacter sphaeroides]
gi|77388265|gb|ABA79450.1| Geranylgeranyl hydrogenase [Rhodobacter sphaeroides 2.4.1]
gi|126104346|gb|ABN77024.1| geranylgeranyl reductase [Rhodobacter sphaeroides ATCC 17029]
gi|332276433|gb|EGJ21748.1| geranylgeranyl reductase [Rhodobacter sphaeroides WS8N]
Length = 394
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 148/403 (36%), Positives = 217/403 (53%), Gaps = 26/403 (6%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V V+GGGP+G AA+ LA+ G L++R KPCGGAIP ++ +FD+P I ++
Sbjct: 5 VFVVGGGPSGATAADELARAGKSVALLDRA-GRIKPCGGAIPPRLIEDFDIPDSQIVARI 63
Query: 113 TKMKMISPSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+MISP+ VDI P E ++GMV RE D +LR RA K GA + G F++++
Sbjct: 64 RTARMISPTGRKVDI-----PIEGGFVGMVDREHFDEWLRRRAAKAGAERLTGTFLRVE- 117
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS-INAGD-YDYAIAF 228
R+ YV++ + GE++ E VIGADGA S VA++ + GD IA+
Sbjct: 118 -RDSFHTYVVWREK------ATGEEKRSETKLVIGADGAKSDVARAEVPGGDKIPMVIAY 170
Query: 229 QERVKIPDEKMVYYE-NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQL 287
E +K P ++ Y+ ++ VSPDFYGW+FP + +VG GT D+K+
Sbjct: 171 HEIIKPPTSSVIDYDPTRCDVIYDGRVSPDFYGWIFPHGETASVGMGTGILGFDLKEATA 230
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAK 346
R +A + + IR E PIP P + +G+ V L GDAAG V SGEGIY+A
Sbjct: 231 LLRRQAG--LDQCETIRKEGAPIPLQPLEKWDNGKDVVLAGDAAGVVAPSSGEGIYYAFV 288
Query: 347 SGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAF 406
G++ A A + ++G R D RK KT +KVL +Q +YR + RE F
Sbjct: 289 GGQVAARACLAALKSG-RATDLQLARKMFMADHKT---VFKVLRSMQDAYYRDDERRERF 344
Query: 407 VEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVR 449
V +C D VQ++TF+SY+ K++ P +K+ + L R
Sbjct: 345 VSLCHDTDVQRLTFESYMNKKLTSKQPWAHIKIGFKNVMHLTR 387
>gi|332526099|ref|ZP_08402237.1| geranylgeranyl reductase [Rubrivivax benzoatilyticus JA2]
gi|332109942|gb|EGJ10570.1| geranylgeranyl reductase [Rubrivivax benzoatilyticus JA2]
Length = 400
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 208/384 (54%), Gaps = 16/384 (4%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
+A+ G L++R KPCGGAIP + +F +P ++I K +MISPS+V VDI
Sbjct: 24 IARQGRSVLLLDRA-GRIKPCGGAIPPRAIRDFGIPDELIVAKALCARMISPSDVKVDIH 82
Query: 129 QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGT 188
+ Y+G+V RE D +LRERA + GA G F ++D R+ + ++ Y +D
Sbjct: 83 IE---NGYVGLVDREHFDEWLRERARQCGAERRTGTFERID--RDTDGCAIVRYRPHDKG 137
Query: 189 KGGVGEKRTLEVDAVIGADGANSRVAKS--INAGDYDYAIAFQERVKIPDEKMVYYE-NL 245
+ G G++ + A+IGADGA S VA+ A + +Y A+ E ++ P+ Y+ N
Sbjct: 138 ERGEGQEAAVRARAIIGADGARSEVARQQIACANEIEYVFAYHEIIEAPEPGHPDYDPNR 197
Query: 246 AEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRV 305
++Y +SPDFYGWVFP ++VGTG+ ++ R A + + IR
Sbjct: 198 CDVYYRGTISPDFYGWVFPHGKTMSVGTGSADKGFSLRNATAKLREDA--GLANCRTIRR 255
Query: 306 EAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTR 364
E PIP P +GR V L GDA+G V SGEGIY+A GR AEA++E G
Sbjct: 256 EGAPIPLKPLRCWDNGRDVVLAGDASGVVAPASGEGIYYALAGGRFAAEAVLEMLRTGDA 315
Query: 365 MIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYL 424
G R ++ + + +W +L V+Q+ +Y S+ RE FV +C D+ VQ++TFDSY+
Sbjct: 316 KALAGARRNFMREHGRVFW----ILGVMQRFWYSSDKRRERFVSICKDKDVQQLTFDSYM 371
Query: 425 YKRVVPGNPLEDLKLAVNTIGSLV 448
KR+ P+ +++ I L+
Sbjct: 372 NKRLTRRKPMAHVRIFFKDIAHLL 395
>gi|89052658|ref|YP_508109.1| geranylgeranyl reductase [Jannaschia sp. CCS1]
gi|88862207|gb|ABD53084.1| Geranylgeranyl reductase [Jannaschia sp. CCS1]
Length = 393
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 148/394 (37%), Positives = 214/394 (54%), Gaps = 25/394 (6%)
Query: 60 PAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMIS 119
P+G AAE LA++G LI+R KPCGGAIP ++ +F++P I K+T +MIS
Sbjct: 12 PSGATAAEDLARSGHLVALIDRD-GRIKPCGGAIPPRLIADFNIPDSQIVAKITTARMIS 70
Query: 120 PSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQP 177
P+ VDI P E ++GMV RE D +LR RA GA G + + + R+ +
Sbjct: 71 PTKRRVDI-----PIENGFVGMVDREHFDEFLRVRACDAGAERFTGTYTR--ISRDADGT 123
Query: 178 YVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS-INAGD-YDYAIAFQERVKIP 235
+V + + GE R L+ VIGADGA S+VA S + GD Y IA+ E ++ P
Sbjct: 124 HVHFRDK------ASGEDRVLDTKMVIGADGARSKVAASEVKGGDKIPYVIAYHEIIESP 177
Query: 236 DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKD 295
D VY ++ +SPDFYGWVFP +VG G++ D+K+ A R +
Sbjct: 178 DATDVYDPKRCDVIYDGAISPDFYGWVFPHGKSASVGMGSMIKDVDLKEATAALREASG- 236
Query: 296 KILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEA 354
+ K IR E PIP P + +GR V L GDAAG V SGEGIY+A GR+ A A
Sbjct: 237 -LTDCKTIRREGAPIPLKPLDQWDNGRDVVLAGDAAGVVAPSSGEGIYYAMVGGRVAATA 295
Query: 355 IIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEY 414
++G MI + L + L + K + +KVL +Q +Y+S+ RE FV +C D
Sbjct: 296 AAAKLQSG--MIKDLQLARKL--FMKEHKSVFKVLGAMQNAYYKSDERRERFVSLCHDID 351
Query: 415 VQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
VQ++TF++Y+ K +V P+ LK+ + + L+
Sbjct: 352 VQRLTFEAYMNKSLVKARPMAHLKIGIKNVSHLL 385
>gi|126734131|ref|ZP_01749878.1| geranylgeranyl reductase [Roseobacter sp. CCS2]
gi|126716997|gb|EBA13861.1| geranylgeranyl reductase [Roseobacter sp. CCS2]
Length = 395
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 147/402 (36%), Positives = 214/402 (53%), Gaps = 25/402 (6%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V V+G GP+G AAE LA++G + I+R KPCGGA+P ++ +F +P + I KV
Sbjct: 7 VVVVGAGPSGATAAEDLARSGHKVAFIDRD-GRIKPCGGAVPPRLIEDFFIPDEQIVAKV 65
Query: 113 TKMKMISPSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+MISP+ VDI P E ++GMV RE D +LR+RA+ GA G F K++
Sbjct: 66 NTARMISPTGRHVDI-----PIENGFVGMVDREHFDEFLRKRAKDAGAHRYTGTFTKIE- 119
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS-INAGD-YDYAIAF 228
R+ + +V+Y + G + L+ VIGADGA S VA++ + GD Y IA+
Sbjct: 120 -RDADGTHVIYRDKISGNE------MKLDTKLVIGADGARSNVARAEVKDGDKIPYVIAY 172
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLA 288
E ++ P+ Y ++ +SPDFYGWVFP +VG G++ D+K Q
Sbjct: 173 HEIIEAPEPTPSYDPARCDVVYDGKISPDFYGWVFPHGGQASVGMGSMIKSVDVK--QAT 230
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKS 347
RA + K IR E PIP P +G V L GDAAG V SGEGIY+A
Sbjct: 231 ADLRAASGLTDCKTIRKEGAPIPLKPLDCWDNGSDVVLAGDAAGVVAPSSGEGIYYAMVG 290
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GR+ A A G DL+ + + + + ++VL +Q +YRS+ RE FV
Sbjct: 291 GRVAATAAAACLSTGR----AKDLQLARKLFMREHKQVFRVLGAMQNAYYRSDERRERFV 346
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVR 449
+C D VQK+TF++Y+ K++V P+ LK+ + + L R
Sbjct: 347 SLCHDVDVQKLTFEAYMNKKLVKARPMAHLKIGIKNLAHLTR 388
>gi|115523359|ref|YP_780270.1| geranylgeranyl reductase [Rhodopseudomonas palustris BisA53]
gi|115517306|gb|ABJ05290.1| geranylgeranyl reductase [Rhodopseudomonas palustris BisA53]
Length = 401
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 146/397 (36%), Positives = 215/397 (54%), Gaps = 27/397 (6%)
Query: 60 PAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMIS 119
PAG AA LAK+G + L++R KPCGGAIP + +F +P +I K++ +MIS
Sbjct: 17 PAGSTAANDLAKDGRKVVLLDRA-GRIKPCGGAIPPRAIRDFAIPDHMIVAKISSARMIS 75
Query: 120 PSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQP 177
PS+ VD+ P + Y+GMV R D +LR RA ++GA GLF + R+
Sbjct: 76 PSDNEVDM-----PIDGGYVGMVDRAEFDEWLRTRAAESGAERRTGLFKR--FTRDESGV 128
Query: 178 YVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGDYDYAIAFQERVKIP 235
++Y E+ G ++ T+ A+IGADGA S VA+ A + A+ E VK P
Sbjct: 129 NTIHYEEH--LPDGSVKEHTVRARAIIGADGAVSAVARQFLPEADRVPFVFAYHEIVKAP 186
Query: 236 --DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRA 293
D+ Y ++Y VSPDFYGWVFP D V++GTG++ HKG + +A +A
Sbjct: 187 RPDQGAAYEGRRCDVYYQGKVSPDFYGWVFPHGDTVSIGTGSM-HKGFSLRDSVAELRKA 245
Query: 294 K--DKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRM 350
D++ + IR E PIP HP R G V L GDAAG V SGEGIY+A GR+
Sbjct: 246 TGLDQL---ETIRKEGAPIPLHPLARWDDGHSVLLAGDAAGVVAPASGEGIYYALLGGRL 302
Query: 351 CAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMC 410
A+AI E E G ++++ +W +L ++QK +Y S+ RE FV +C
Sbjct: 303 AADAIGEFLETGDVAALGAARKRFMRANGTVFW----ILGLMQKYWYSSDKRREQFVNIC 358
Query: 411 ADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSL 447
D VQK+T+D+Y+ K++V P+ +++ + +
Sbjct: 359 RDSDVQKLTWDAYMNKKLVRAKPIAHVRIFFKNLAHM 395
>gi|383770191|ref|YP_005449254.1| geranylgeranyl reductase BchP [Bradyrhizobium sp. S23321]
gi|381358312|dbj|BAL75142.1| geranylgeranyl reductase BchP [Bradyrhizobium sp. S23321]
Length = 398
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/393 (35%), Positives = 209/393 (53%), Gaps = 21/393 (5%)
Query: 60 PAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMIS 119
P+G AA LAK G L++R KPCGGAIP ++ +FD+P ++ V+ +M+S
Sbjct: 16 PSGATAAHNLAKLGRSVLLLDRA-GRIKPCGGAIPPRLIRDFDIPDHLLVAHVSSARMVS 74
Query: 120 PSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQP 177
PS+ VD+ P + ++GMV R+V D +LR RA + GA GLF + + R+
Sbjct: 75 PSDQQVDM-----PIDGGFVGMVDRDVFDEWLRTRAAEAGAQRRIGLFKRFE--RDETGA 127
Query: 178 YVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGDYDYAIAFQERVKIP 235
+++Y E + G + T+ A+IGADGA S VA+ A Y A+ E V+ P
Sbjct: 128 TIVHYEER--SADGASMESTVRARALIGADGALSAVARQCLPGADRQPYVFAYHEIVRAP 185
Query: 236 DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKD 295
+ ++Y VSPDFYGWVFP D V+VGTG+ +++ R+ A
Sbjct: 186 PAASSFDGTRCDVYYRGSVSPDFYGWVFPHGDTVSVGTGSARKGFSLRESVGGLRDAA-- 243
Query: 296 KILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEA 354
+ + IR E PIP HP PR G V L GDAAG V SGEGIY+A GR+ AEA
Sbjct: 244 GLATSETIRREGAPIPLHPLPRWDDGHSVLLAGDAAGVVAPASGEGIYYAMIGGRLSAEA 303
Query: 355 IIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEY 414
+ E E G+ ++++ +W +L V+Q +Y ++ RE FV +C D
Sbjct: 304 VDEFLETGSAKALRNARKRFMRLHGVVFW----ILGVMQWYWYSNDRRRERFVSICRDRD 359
Query: 415 VQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSL 447
VQK+T+D+Y+ K +V P+ +++ + +
Sbjct: 360 VQKLTWDAYMNKELVRAKPVAHVRIFFKNLAHM 392
>gi|110677559|ref|YP_680566.1| geranylgeranyl hydrogenase [Roseobacter denitrificans OCh 114]
gi|109453675|gb|ABG29880.1| geranylgeranyl hydrogenase [Roseobacter denitrificans OCh 114]
Length = 392
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 147/400 (36%), Positives = 212/400 (53%), Gaps = 25/400 (6%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V VIGGGP+G AA L +G L++RK KPCGGAIP ++ +F + D + KV
Sbjct: 4 VVVIGGGPSGATAALDLVHSGHRVALLDRK-GRIKPCGGAIPPRLMQDFHIGDDQLLAKV 62
Query: 113 TKMKMISPSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+MISP+ VDI P E ++GMV R+ D +LR+RA GA G F++++
Sbjct: 63 NTARMISPTGRKVDI-----PIENGFVGMVDRKDFDPFLRQRAADAGADYFTGTFVRIER 117
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRV--AKSINAGDYDYAIAF 228
P P V+Y + E+R L VIGADGA SRV A+ +A A+
Sbjct: 118 PEG--TPVVIYRDK------ATQEERELPCKLVIGADGAKSRVGLAEVKDADKVPLVFAY 169
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLA 288
E +K P + +Y ++ +SPDFYGWVFP + +VG GT ++K+ A
Sbjct: 170 HEIIKAPPKSAIYDPERCDVIYDGAISPDFYGWVFPHGNSASVGMGTELSSVNLKEATAA 229
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKS 347
R+ A + + IR E PIP P R +G+ V L GDAAG V SGEGIY+A
Sbjct: 230 LRDAAG--LSDCETIRKEGAPIPLRPLDRWDNGKDVLLAGDAAGVVAPSSGEGIYYAMVG 287
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GR+ A A +G DLR + + K + ++VL +Q +YRS+ RE FV
Sbjct: 288 GRVAATACAATLASGRVK----DLRLARQLFMKEHKMVFRVLGSMQNAYYRSDERRERFV 343
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSL 447
+C D VQ++TF++Y+ K++V P+ LK+ + + L
Sbjct: 344 SLCHDVDVQRLTFEAYMNKKLVRARPMAHLKIGIKNLAHL 383
>gi|291168930|gb|ADD81871.1| geranylgeranyl reductase [Lonicera graebneri]
Length = 132
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 117/131 (89%)
Query: 123 VAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYY 182
VAVDIGQTLKPHEYIGMVRRE+LDAYLR+RA GA+VINGLF+KMD P + PYVL+Y
Sbjct: 1 VAVDIGQTLKPHEYIGMVRREILDAYLRDRAAGAGATVINGLFLKMDKPGDKTSPYVLHY 60
Query: 183 TEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYY 242
T YD G+GEKRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQER+KIPDEKM YY
Sbjct: 61 TGYDTKTSGMGEKRTLEVDAVIGADGANSRVAKSISAGDYEYAIAFQERIKIPDEKMEYY 120
Query: 243 ENLAEMYVGDD 253
ENLAEMYVGD+
Sbjct: 121 ENLAEMYVGDE 131
>gi|149914219|ref|ZP_01902750.1| geranylgeranyl reductase [Roseobacter sp. AzwK-3b]
gi|149811738|gb|EDM71571.1| geranylgeranyl reductase [Roseobacter sp. AzwK-3b]
Length = 392
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 149/396 (37%), Positives = 216/396 (54%), Gaps = 27/396 (6%)
Query: 60 PAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMIS 119
P+G AAE LA++G + L++R KPCGGAIP ++ +FDLP + + K+T +MIS
Sbjct: 11 PSGATAAEDLARSGHKVALLDRA-GRIKPCGGAIPPRLIADFDLPDEQLVAKITTARMIS 69
Query: 120 PSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQP 177
P+ VDI P E ++GMV RE D +LR+RA GA+ G ++++D R+ +
Sbjct: 70 PTGRKVDI-----PIENGFVGMVDREDFDEFLRKRAAHAGATRATGTYLRID--RDGDGT 122
Query: 178 YVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS-INAGD-YDYAIAFQERVKIP 235
V+Y + G + R+L VIGADGA S VA++ + GD Y IA+ E ++ P
Sbjct: 123 RVVYRDKVSGNE------RSLATKLVIGADGARSNVARTEVPGGDRIPYVIAYHEIIEAP 176
Query: 236 DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRN-RAK 294
+ Y ++ +SPDFYGWVFP +VG G++ D+KK AT + R
Sbjct: 177 GKVGDYDPARCDVIYDGRISPDFYGWVFPHGKSASVGMGSMVRDVDLKK---ATADLRLA 233
Query: 295 DKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAE 353
+ IR E PIP P R +G V L GDAAG V SGEGIY+A GR+ A
Sbjct: 234 SGLADCPTIRKEGAPIPLKPLDRWDNGSDVVLAGDAAGVVAPSSGEGIYYAMVGGRVAAT 293
Query: 354 AIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADE 413
A +G R+ D RK KT ++VL +Q +YRS+ RE FV +C D
Sbjct: 294 AASACLASG-RVRDLRLARKLFMSEHKT---VFRVLASMQNAYYRSDERRERFVSLCHDI 349
Query: 414 YVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVR 449
VQ++TF++Y+ K++V P+ LK+ + + L R
Sbjct: 350 DVQRLTFEAYMNKKLVRARPMAHLKIGLKNLAHLTR 385
>gi|89258493|gb|ABD65460.1| geranylgeranyl dehydrogenase [Gossypium hirsutum]
Length = 116
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/112 (89%), Positives = 106/112 (94%)
Query: 351 CAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMC 410
AEAI+EGSENG +M+DEGDLRKYLEKWDK YWPTYKVLDVLQKVFYRSNPAREAFVEMC
Sbjct: 5 VAEAIVEGSENGKKMVDEGDLRKYLEKWDKKYWPTYKVLDVLQKVFYRSNPAREAFVEMC 64
Query: 411 ADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
ADEYVQKMTFDSYLYK V PGNPLEDLKLAVNTIGSLVRANALR+EM+KL +
Sbjct: 65 ADEYVQKMTFDSYLYKTVAPGNPLEDLKLAVNTIGSLVRANALRKEMEKLNV 116
>gi|159046068|ref|YP_001534862.1| geranylgeranyl reductase [Dinoroseobacter shibae DFL 12]
gi|157913828|gb|ABV95261.1| geranylgeranyl reductase [Dinoroseobacter shibae DFL 12]
Length = 394
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 210/394 (53%), Gaps = 26/394 (6%)
Query: 60 PAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMIS 119
P+G AAE LA+ G + LI+R KPCGGAIP ++ +FD+P I K+ +M+S
Sbjct: 12 PSGATAAEDLARAGKKVALIDRA-GRIKPCGGAIPPRLIADFDIPESQIVAKINTARMVS 70
Query: 120 PSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQP 177
P+ VDI P E ++GMV RE D +LR+RA K GA G F+++D R+ +
Sbjct: 71 PTARHVDI-----PIENGFVGMVDREFFDEFLRDRAAKAGADRHTGTFLRID--RSEKGT 123
Query: 178 YVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYD--YAIAFQERVKIP 235
+V+Y + E+ + +IGADGA S VA++ G Y IA+ E +K P
Sbjct: 124 WVVYRDKTSR------EEVAIRTKLIIGADGARSDVARAEVPGGSTIPYVIAYHEIIKAP 177
Query: 236 DEKMVYYENLAEMYVGDDV-SPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAK 294
+ Y+ + D V SPDFYGWVFP +VG GT D+K R+ A
Sbjct: 178 EGVSDKYDPTRCDVIYDGVVSPDFYGWVFPHGKSASVGMGTGVDGTDLKAATKLLRDSAG 237
Query: 295 DKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAE 353
+ + IR E PIP P + +GR + L GDAAG V SGEGIY+A GR+ E
Sbjct: 238 --LSECETIRKEGAPIPLKPLDKWDNGRDLVLAGDAAGVVAPSSGEGIYYAMAGGRVAGE 295
Query: 354 AIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADE 413
A +E G L K +++ K + ++VL +Q +YRS+ RE FV +C D
Sbjct: 296 AALECLRTGQVKA----LAKARKRFLKEHGTVFRVLGAMQDAYYRSDERRERFVSLCHDV 351
Query: 414 YVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSL 447
VQ++TF++Y+ K++V P+ LK+ V + L
Sbjct: 352 DVQRLTFEAYMNKKLVRARPMAHLKIGVKNLAHL 385
>gi|291168860|gb|ADD81839.1| geranylgeranyl reductase [Symphoricarpos albus]
Length = 134
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/133 (77%), Positives = 117/133 (87%)
Query: 121 SNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVL 180
S+V VD GQTLKPHEYIGMVRRE+LD+YLR+RA GA+VING+F+KMD P + PYVL
Sbjct: 1 SHVXVDXGQTLKPHEYIGMVRREILDSYLRDRAAGAGATVINGIFLKMDKPSDKTSPYVL 60
Query: 181 YYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMV 240
+YT YD G+GEKRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQER+KIPDEKM
Sbjct: 61 HYTGYDAKTSGMGEKRTLEVDAVIGADGANSRVAKSISAGDYEYAIAFQERIKIPDEKMQ 120
Query: 241 YYENLAEMYVGDD 253
YYENLAEMYVGD+
Sbjct: 121 YYENLAEMYVGDE 133
>gi|302384164|ref|YP_003819987.1| geranylgeranyl reductase [Brevundimonas subvibrioides ATCC 15264]
gi|302194792|gb|ADL02364.1| geranylgeranyl reductase [Brevundimonas subvibrioides ATCC 15264]
Length = 405
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/418 (33%), Positives = 215/418 (51%), Gaps = 28/418 (6%)
Query: 40 AKTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVG 99
++ P + V+GGGP+G AA LA G L++R+ KPCGGAIP ++
Sbjct: 2 SRPEPGIVAETFDCVVVGGGPSGSTAARHLASQGRTVLLLDRQ-GRIKPCGGAIPPRLIR 60
Query: 100 EFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNG 157
+FD+P +I K + +MI+PS+ V + P E Y+GMV RE D +LR RAE G
Sbjct: 61 DFDIPDSLICAKANEARMIAPSDRRVHM-----PIEGGYVGMVNREAFDEWLRARAETAG 115
Query: 158 ASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVA-KS 216
A G F +++ R + ++ Y K + +IGADGA S VA ++
Sbjct: 116 AQRRTGTFDRIE--READGSALILYRPAGAPKDA--PPIAVRARTIIGADGARSNVAAQA 171
Query: 217 INAGDYD-YAIAFQERVKIPDEKMVYYE-NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTG 274
+ D Y A+ E +K P +E + +++ ++SPDFY W+FP D ++G G
Sbjct: 172 VKGADKQRYVFAYHEIIKAPAAGTADFEASRCDVWYQGNLSPDFYAWIFPHGDTASIGVG 231
Query: 275 TVTHKGDIKKFQLATRNRAKDKILG---GKIIRVEAHPIPEHPRPRRLSGR-VALVGDAA 330
++ K F L T A K+ G + +R E PIP P R +GR V L GDAA
Sbjct: 232 SMQ-----KGFSLRTAVTALRKVAGLTECETVRTEGAPIPLKPMKRWDNGRDVVLAGDAA 286
Query: 331 GYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLD 390
G V SGEGIY+A + GR+ AEA+ G G L + +++ K + + VL
Sbjct: 287 GVVAPASGEGIYYAMEGGRLAAEAVEATLATGK----AGALTQARKRFMKAHGKVFMVLG 342
Query: 391 VLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
++Q +YRS+ RE FV +C D +Q++T+ +Y+ K +V P ++ +G L+
Sbjct: 343 IMQHFWYRSDKRRERFVSLCDDPDIQELTWQAYMNKELVKAKPAAHARIFFKDMGHLL 400
>gi|21328616|gb|AAM48623.1| geranylgeranyl hydrogenase [uncultured marine proteobacterium]
Length = 400
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 146/408 (35%), Positives = 213/408 (52%), Gaps = 30/408 (7%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
+ V V+GGGP+G AA +A G L+ER KPCGGAIP CM+ EFD+P ++
Sbjct: 7 DFDVIVVGGGPSGATAAHEIALAGHRVLLLERAF-RIKPCGGAIPPCMLEEFDIPRSLLK 65
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMK 167
++ +MISP+ VD+ P E ++GMV R+ D +LR RA++ GA + F K
Sbjct: 66 AEIQSARMISPTVQKVDM-----PIEGTFVGMVDRDEFDPWLRSRAQQAGAELELAAFKK 120
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS--INAGDYDYA 225
++ + E V Y + KG + R V+GADGA S+VA+ D +
Sbjct: 121 LEYLDD-ETIQVTYVS-----KGHDTDVRRATARCVLGADGARSKVARQGIPKYADVPWV 174
Query: 226 IAFQERVKIPDEKMVYYE-NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKK 284
+A+ E VK PD Y+ E++ +SPDFY WVFP + ++G G+ +K
Sbjct: 175 LAYHEIVKAPDTATENYDPQRCEVWYQGKLSPDFYAWVFPHGNSASIGVGSA-----LKD 229
Query: 285 FQLATRNRAKDKILG---GKIIRVEAHPIPEHPRPRRLSGRVALV-GDAAGYVTKCSGEG 340
F A I G + IR E PIP P R G+ LV GDAAG V SGEG
Sbjct: 230 FSAQDSVSALRTISGLDTAETIRKEGAPIPMKPMKRWDDGKGVLVSGDAAGVVAPASGEG 289
Query: 341 IYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSN 400
IY+A GR+ A+A+ E +G + +++++ +T+W L +LQ +Y S+
Sbjct: 290 IYYAMLCGRLSADAVNEFLLSGKPAALKAPRKRFMKLHGRTFW----ALGLLQYFWYHSD 345
Query: 401 PAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
RE FVEMC D+ VQ +T+ SY K++V E L++ V I L+
Sbjct: 346 KRREQFVEMCKDDDVQTLTWQSYTQKKLVKKKRKEHLRVFVKDIAQLL 393
>gi|383759192|ref|YP_005438177.1| geranylgeranyl bacteriochlorophyll reductase BchP [Rubrivivax
gelatinosus IL144]
gi|7416817|dbj|BAA94066.1| geranylgeranyl bacteriochlorophyll reductase [Rubrivivax
gelatinosus]
gi|381379861|dbj|BAL96678.1| geranylgeranyl bacteriochlorophyll reductase BchP [Rubrivivax
gelatinosus IL144]
Length = 400
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 208/384 (54%), Gaps = 16/384 (4%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
+A+ G L++R KPCGGAIP + +F +P ++I K +MISP++V VDI
Sbjct: 24 IARQGRSVLLLDRA-GRIKPCGGAIPPRAIRDFGIPDELIVAKALCARMISPTDVKVDIH 82
Query: 129 QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGT 188
+ Y+G+V RE D +LRERA + GA G F ++D R+ + ++ Y ++
Sbjct: 83 IE---NGYVGLVDREQFDEWLRERARQCGAVRRTGTFERID--RDADGCAIVRYRPHEKG 137
Query: 189 KGGVGEKRTLEVDAVIGADGANSRVAKS--INAGDYDYAIAFQERVKIPDEKMVYYE-NL 245
+ G G++ + A+IGADGA S VA+ A + +Y A+ E ++ P+ Y+ +
Sbjct: 138 ERGEGQEAAVRARAIIGADGARSEVARQQISCAHEVEYVFAYHEIIEAPEPGHPDYDPSR 197
Query: 246 AEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRV 305
++Y +SPDFYGWVFP ++VGTG+ ++ R A + K IR
Sbjct: 198 CDVYYRGTISPDFYGWVFPHGKTMSVGTGSADKGFSLRNATAKLREDAG--LANCKTIRR 255
Query: 306 EAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTR 364
E PIP P +GR V L GDA+G V SGEGIY+A GR AEA++E G
Sbjct: 256 EGAPIPLKPLRCWDNGRDVVLAGDASGVVAPASGEGIYYALAGGRFAAEAVLEMLRTGDA 315
Query: 365 MIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYL 424
G R ++ + + +W +L +LQ+ +Y S+ RE FV +C D+ VQ++TFDSY+
Sbjct: 316 KALAGARRNFMREHGRVFW----ILGILQRFWYSSDKRRERFVSICKDKDVQQLTFDSYM 371
Query: 425 YKRVVPGNPLEDLKLAVNTIGSLV 448
KR+ P+ +++ I L+
Sbjct: 372 NKRLTRRKPMAHVRIFFKDIAHLL 395
>gi|339505954|ref|YP_004716652.1| geranylgeranyl reductase BchP [Roseobacter litoralis Och 149]
gi|338759947|gb|AEI96410.1| geranylgeranyl reductase BchP [Roseobacter litoralis Och 149]
Length = 392
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 145/400 (36%), Positives = 212/400 (53%), Gaps = 25/400 (6%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V VIGGGP+G AA L ++G + L++R+ KPCGGAIP ++ +F + D + KV
Sbjct: 4 VVVIGGGPSGATAALDLVQSGHKVALLDRE-GRIKPCGGAIPPRLMQDFHIGDDQLLAKV 62
Query: 113 TKMKMISPSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+MISP+ VDI P E ++GMV R+ D +LR+RA GA G F++++
Sbjct: 63 NTARMISPTGRKVDI-----PIENGFVGMVDRKDFDPFLRKRAADAGAEYFTGTFVRIER 117
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRV--AKSINAGDYDYAIAF 228
P P V+Y + E+R L VIGADGA SRV A+ +A A+
Sbjct: 118 PEG--TPVVIYRDK------ATQEERALPCKLVIGADGAKSRVGLAEVKDADKVPLVFAY 169
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLA 288
E +K P + +Y ++ +SPDFYGWVFP + +VG GT ++K+ A
Sbjct: 170 HEIIKAPPKSAIYDPERCDVIYDGAISPDFYGWVFPHGNSASVGMGTELSSVNLKEATAA 229
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKS 347
R A + + IR E PIP P R +G+ V L GDAAG V SGEGIY+A
Sbjct: 230 LRKSAG--LTDCETIRKEGAPIPLRPLDRWDNGKDVLLAGDAAGVVAPSSGEGIYYAMVG 287
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GR+ A A + DLR + + K + ++VL +Q +YRS+ RE FV
Sbjct: 288 GRVAATACAATLASDRVK----DLRLARQLFMKEHKMVFRVLGSMQNAYYRSDERRERFV 343
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSL 447
+C D VQ++TF++Y+ K++V P+ LK+ + + L
Sbjct: 344 SLCHDVDVQRLTFEAYMNKKLVRARPMAHLKIGIKNLAHL 383
>gi|221639702|ref|YP_002525964.1| geranylgeranyl reductase [Rhodobacter sphaeroides KD131]
gi|221160483|gb|ACM01463.1| Geranylgeranyl reductase BchP [Rhodobacter sphaeroides KD131]
Length = 394
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 148/403 (36%), Positives = 218/403 (54%), Gaps = 26/403 (6%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V V+GGGP+G AA+ LA+ G L++R KPCGGAIP ++ +FD+P I ++
Sbjct: 5 VFVVGGGPSGATAADELARAGKSVALLDRA-GRIKPCGGAIPPRLIEDFDIPDSQIVARI 63
Query: 113 TKMKMISPSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+MISP+ VDI P E ++GMV RE D +LR RA K GA + G F++++
Sbjct: 64 RTARMISPTGRKVDI-----PIEGGFVGMVDREHFDEWLRRRAAKAGAERLTGTFLRIE- 117
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS-INAGD-YDYAIAF 228
R+ YV++ + GE++ E VIGADGA S VA++ + GD IA+
Sbjct: 118 -RDSFHTYVVWREK------ATGEEKRSETKLVIGADGAKSDVARAEVPGGDKIPMVIAY 170
Query: 229 QERVKIPDEKMVYYE-NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQL 287
E +K P ++ Y+ ++ VSPDFYGW+FP + +VG GT D+K+
Sbjct: 171 HEIIKPPTSSVIDYDPTRCDVIYDGRVSPDFYGWIFPHGETASVGMGTGILGFDLKEATA 230
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAK 346
R +A + + IR E PIP P + +G+ V L GDAAG V SGEGIY+A
Sbjct: 231 LLRRQAG--LDQCETIRKEGAPIPLQPLEKWDNGKDVVLAGDAAGVVAPSSGEGIYYAFV 288
Query: 347 SGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAF 406
G++ A+A + ++G R D RK KT +KVL +Q +YR + RE F
Sbjct: 289 GGQVAAKACLAALKSG-RATDLQLARKMFMADHKT---VFKVLRSMQDAYYRDDERRERF 344
Query: 407 VEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVR 449
V +C D VQ++TF+SY+ K++ P +K+ + L R
Sbjct: 345 VSLCHDTDVQRLTFESYMNKKLTSKQPWAHIKIGFKNVMHLTR 387
>gi|114707562|ref|ZP_01440458.1| geranylgeranyl reductase [Fulvimarina pelagi HTCC2506]
gi|114537121|gb|EAU40249.1| geranylgeranyl reductase [Fulvimarina pelagi HTCC2506]
Length = 413
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 149/416 (35%), Positives = 215/416 (51%), Gaps = 32/416 (7%)
Query: 42 TSPKLTN----RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCM 97
T P +N + VIGGGPAG AA LA+ G T L+ER KPCGGAIP +
Sbjct: 10 TMPAASNAAQVKRFDAVVIGGGPAGSTAALRLAEAGYSTALVERG-GRIKPCGGAIPPRL 68
Query: 98 VGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEK 155
+ +F +P ++ ++ +MI+PS VD+ P + ++GMV RE D +LRERA
Sbjct: 69 IQDFAIPGHLLKATISSARMIAPSGKTVDM-----PIDGGFVGMVDREEFDEWLRERAVS 123
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
G + I +F ++ P E + T+ +GE +TL VIGADGA S VA+
Sbjct: 124 RGVTRITAMFDGLE-PAFGEDRQIRIKTK-------LGEIQTLSARLVIGADGARSAVAR 175
Query: 216 SI--NAGDYDYAIAFQERVK---IPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA 270
+ N A+ E V E N +++ +SPDFYGW+FP + V+
Sbjct: 176 AALPNQKQPKSVFAYHEIVDSKGCSSEPASARANRCDVFYQGAISPDFYGWIFPHGETVS 235
Query: 271 VGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDA 329
+GTGT ++K R G K +R E PIP P R GR V + GDA
Sbjct: 236 IGTGTAKKGYGLRK--AVGDLRFASGYGGAKTVRREGAPIPLKPMKRWDDGRNVIVAGDA 293
Query: 330 AGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVL 389
AG V SGEGIY+A +S RM A+A I NG D +L K + + + + VL
Sbjct: 294 AGVVAPASGEGIYYAMESARMVADAGIAFLANG----DARELAKARKLFMGDHGKIFLVL 349
Query: 390 DVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIG 445
++LQ V+YRS+ RE FV +C D VQ++T++SY++KR+ +P ++ +G
Sbjct: 350 ELLQTVWYRSDWLRERFVSICRDPDVQRLTWESYMHKRMSKASPTAHARILWQNLG 405
>gi|291168927|gb|ADD81870.1| geranylgeranyl reductase [Lonicera japonica]
Length = 134
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 105/133 (78%), Positives = 116/133 (87%)
Query: 121 SNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVL 180
SNVAVDIGQTLKPHEYIGMVRRE+LDAYLR+RA GA+VINGLF+KMD P + PYVL
Sbjct: 1 SNVAVDIGQTLKPHEYIGMVRREILDAYLRDRAAGAGATVINGLFLKMDKPGDKTSPYVL 60
Query: 181 YYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMV 240
+YT YD G+GEKRTLEVDAVIGADGANSRVAKSI+AGDYD+A AFQER+KI DEKM
Sbjct: 61 HYTGYDAKISGMGEKRTLEVDAVIGADGANSRVAKSISAGDYDFASAFQERIKISDEKME 120
Query: 241 YYENLAEMYVGDD 253
Y ENLAEMYVGD+
Sbjct: 121 YSENLAEMYVGDE 133
>gi|381165557|ref|ZP_09874784.1| geranylgeranyl reductase [Phaeospirillum molischianum DSM 120]
gi|380685047|emb|CCG39596.1| geranylgeranyl reductase [Phaeospirillum molischianum DSM 120]
Length = 395
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/386 (35%), Positives = 201/386 (52%), Gaps = 26/386 (6%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LA+ G L++R KPCGGA+P ++ EF++P ++ ++TK +MI+PSN VDI
Sbjct: 25 LARRGFSVLLLDRA-GRIKPCGGAVPPRLMAEFEIPDSLLVARITKARMIAPSNQHVDI- 82
Query: 129 QTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
P E Y+GMV R D +LRERA GA G F + R+ V+ Y + +
Sbjct: 83 ----PIEGGYVGMVNRSTFDEWLRERARTAGAERRTGTFETFE--RDENGVAVIRYKDAE 136
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGDYDYAIAFQERVKIPDEKMVYYE- 243
G V + AVIGADGA S + A + A+ E V+ P + YE
Sbjct: 137 GNPAAVKAR------AVIGADGAQSAIGHQAVPGADKLKFVFAYHEFVRTPTQPPANYEA 190
Query: 244 NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKII 303
+ ++Y +SPDFY WVFP D V++GTGT ++ Q T R + + +
Sbjct: 191 DRCDVYYQGPLSPDFYAWVFPHGDTVSIGTGTALKGFSMR--QAVTDLRKTIGLDSAETL 248
Query: 304 RVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENG 362
R E PIP P +GR V L GDAAG V SGEGIY+A GR+ E++ E G
Sbjct: 249 RQEGAPIPMEPLKVWDNGRDVLLAGDAAGVVAPASGEGIYYAMVGGRLAGESVAEFLITG 308
Query: 363 TRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDS 422
G R+++ K + ++VL V+Q+ +Y ++ RE FV +C D+ VQ++TFD+
Sbjct: 309 KSKALAGARRRFM----KAHGNVFRVLGVMQRFWYSNDNRRERFVSICRDQDVQQLTFDA 364
Query: 423 YLYKRVVPGNPLEDLKLAVNTIGSLV 448
Y+ K +V PL +++ + I L
Sbjct: 365 YMNKELVKAKPLAHVRIFLKNIAHLT 390
>gi|86751098|ref|YP_487594.1| geranylgeranyl reductase [Rhodopseudomonas palustris HaA2]
gi|86574126|gb|ABD08683.1| geranylgeranyl reductase [Rhodopseudomonas palustris HaA2]
Length = 400
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/399 (35%), Positives = 218/399 (54%), Gaps = 30/399 (7%)
Query: 60 PAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMIS 119
P+G AA LA+ G L++R KPCGGAIP + +F +P ++ K+ +M+S
Sbjct: 17 PSGATAACDLARAGKRVVLLDRA-GRIKPCGGAIPPRAIRDFAIPDSMLVAKINAARMVS 75
Query: 120 PSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQP 177
P++V VD+ P + ++GMV RE D +LR+RA GA GLF + R+
Sbjct: 76 PTDVEVDM-----PIDGGFVGMVDREHFDEWLRQRAANVGAERRTGLFRR--FTRDESGV 128
Query: 178 YVLYYTEY--DGTKGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGDYDYAIAFQERVK 233
+++Y E DGT + +T+ A+IGADGA S VA+ +A + A+ E +K
Sbjct: 129 NIVHYEERLPDGTM----QDQTVRARAIIGADGAVSAVARQFLPDADRVPFVFAYHEIIK 184
Query: 234 IPDEKMVYYENL-AEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLAT--R 290
P YE+ ++Y VSPDFYGWVFP D V+VGTG++ HKG + +A +
Sbjct: 185 APQPGQAAYESRRCDVYYQGKVSPDFYGWVFPHGDTVSVGTGSM-HKGFSLRDSVAELRK 243
Query: 291 NRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGR 349
D++ + IR E PIP HP PR G V L GDAAG V SGEGIY+A GR
Sbjct: 244 QTGLDEV---ETIRKEGAPIPLHPLPRWDDGHSVLLAGDAAGVVAPASGEGIYYALVGGR 300
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
+ AEA+ E + D L+ +++ + +++L ++Q +Y ++ RE FV +
Sbjct: 301 LAAEAVGEFLDTA----DAKALKLARKRFMRANGSVFRILGLMQWYWYANDKRREQFVSI 356
Query: 410 CADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
C D+ VQK+T+D+Y+ K++V P+ +++ + +
Sbjct: 357 CRDQDVQKLTWDAYMNKKLVRAKPIAHVRIFFKNLAHMT 395
>gi|254503167|ref|ZP_05115318.1| FAD binding domain, putative [Labrenzia alexandrii DFL-11]
gi|222439238|gb|EEE45917.1| FAD binding domain, putative [Labrenzia alexandrii DFL-11]
Length = 401
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 213/405 (52%), Gaps = 22/405 (5%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
N VAVIGGGP G AAE LA++ L++ + KPCGGAIP + +F++ D +
Sbjct: 4 NFDVAVIGGGPCGAIAAERLAQSDHSVVLVDPD-NKIKPCGGAIPSRALKDFEISEDQLV 62
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
+ ++I+PS AV++ + ++GMV RE D YLR RAE+ GA + G +D
Sbjct: 63 ARANAARVIAPSGNAVEM--RIGDIGFVGMVDRETFDPYLRARAEQAGARFVRGKLAGID 120
Query: 170 LPRNFEQPYVLYYTEYDGTK-GGVGEKRTLEVDAVIGADGANSRVAKSINAGDYD--YAI 226
+N + DGT G L VIGADGANS V + + Y
Sbjct: 121 TGQNGS-----LDLKVDGTDPHNPGTTEHLNARMVIGADGANSAVRRLMFPAKKKPPYVF 175
Query: 227 AFQERVK---IPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIK 283
A+ E V+ +PD + + +Y G +SPDFYGWVFP +VG G+ +++
Sbjct: 176 AYHEIVESPAVPDPDIFQRDRCDVVYDGR-ISPDFYGWVFPHGGQTSVGCGSAVKGHNLR 234
Query: 284 KFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIY 342
R+RA + G + IR E P+P P R +G+ V L GDAAG V SGEGIY
Sbjct: 235 DATSDLRDRAG--LTGQRTIRREGAPLPLKPMRRWDNGQNVLLAGDAAGTVAPSSGEGIY 292
Query: 343 FAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPA 402
+A G + A+A+ E G R+++ + + ++ +L ++Q V+YRS+
Sbjct: 293 YAMLCGNLSADAVAECLATGQASALRQARRRFMAEHGRIFF----ILGIMQAVWYRSDGL 348
Query: 403 REAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSL 447
RE FV MCAD VQ++T++SYL KR+V +PL +++ + L
Sbjct: 349 RERFVTMCADPDVQRLTWESYLNKRLVRRDPLGHIRVFFKDLAQL 393
>gi|146277065|ref|YP_001167224.1| geranylgeranyl reductase [Rhodobacter sphaeroides ATCC 17025]
gi|145555306|gb|ABP69919.1| geranylgeranyl reductase [Rhodobacter sphaeroides ATCC 17025]
Length = 394
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 148/403 (36%), Positives = 217/403 (53%), Gaps = 26/403 (6%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V V+GGGP+G AA+ LA+ G L++R KPCGGAIP ++ +FD+P I ++
Sbjct: 5 VFVVGGGPSGATAADELARAGKRVALLDRA-GRIKPCGGAIPPRLIEDFDIPDSQIVARI 63
Query: 113 TKMKMISPSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+MISP+ VDI P E ++GMV RE D +LR RA K GA + G F++++
Sbjct: 64 RTARMISPTGRKVDI-----PIEGGFVGMVDREHFDEWLRCRAAKAGAERLTGTFVRIE- 117
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS-INAGD-YDYAIAF 228
R+ +V++ + GE++ E VIGADGA S VA++ + GD IA+
Sbjct: 118 -RDSFHTWVVWREK------ATGEEKRSEAKFVIGADGAKSDVARAEVPGGDKIPMVIAY 170
Query: 229 QERVKIPDEKMVYYE-NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQL 287
E +K P + Y+ ++ VSPDFYGW+FP +VG GT H D+K+
Sbjct: 171 HEIIKPPASPAIDYDPTRCDVIYDGRVSPDFYGWIFPHGQTASVGMGTGIHGFDLKEATA 230
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAK 346
R +A + + IR E PIP P + +G+ V L GDAAG V SGEGIY+A
Sbjct: 231 LLRKQAG--LDQCETIRKEGAPIPLQPLDKWDNGKDVVLAGDAAGVVAPSSGEGIYYAFV 288
Query: 347 SGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAF 406
G++ A+A + ++G R D RK KT +KVL +Q +YR + RE F
Sbjct: 289 GGQVAAKACLAALKSG-RATDLQLARKLFMADHKT---VFKVLRSMQDAYYRDDERRERF 344
Query: 407 VEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVR 449
V +C D VQ++TF+SY+ K++ P +K+ + L R
Sbjct: 345 VSLCHDVDVQRLTFESYMNKKLTSKQPWAHIKIGFKNVMHLTR 387
>gi|410687143|ref|YP_006965278.1| geranylgeranyl diphosphate reductase BchP [Sulfitobacter
guttiformis]
gi|399920085|gb|AFP55489.1| geranylgeranyl diphosphate reductase BchP [Sulfitobacter
guttiformis]
Length = 402
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 149/396 (37%), Positives = 201/396 (50%), Gaps = 28/396 (7%)
Query: 60 PAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMIS 119
P G AA LAK G L++R KPCGGA+P M+ ++D+P I K+ +MIS
Sbjct: 20 PCGATAATDLAKRGYSVALLDRD-GRIKPCGGAVPPRMIEDYDIPDSQIVAKIRTARMIS 78
Query: 120 PSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQP 177
P+ VDI P E Y+GMV RE D YLR RA GA I G + K + R+ E
Sbjct: 79 PTQRHVDI-----PIENGYVGMVDREHFDEYLRVRAATAGALRITGTYTK--ITRDAEGT 131
Query: 178 YVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAG--DYDYAIAFQERVKIP 235
+V Y + GE R + VIGADGA S +AK+ G Y IA+ E ++ P
Sbjct: 132 HVHYRHKE------TGENRAMTCRMVIGADGARSNIAKTEVPGGAKIPYVIAYHEIIEAP 185
Query: 236 DEKMVYYE-NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRN-RA 293
+Y ++ +SPDFYGWVFP +VG GT D+KK AT + RA
Sbjct: 186 TVTTEHYNPQRCDVIYDGRISPDFYGWVFPHGKSASVGMGTCIDGVDLKK---ATADLRA 242
Query: 294 KDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCA 352
+ K IR E PIP P R +G V L GDAAG V SGEGIY+A G A
Sbjct: 243 NAGLTDCKTIRREGAPIPLKPLDRWDNGSDVLLAGDAAGVVAPSSGEGIYYAMACGTSAA 302
Query: 353 EAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCAD 412
A + R DL+ + + + ++VL +Q +Y+S+ RE FV +C D
Sbjct: 303 LA----TARRLRTNMPSDLKLSRKMFMGEHGQVFRVLGAMQNAYYKSDMRRERFVSLCHD 358
Query: 413 EYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
VQK+TF++Y+ K++V PL LK+ + I L
Sbjct: 359 VDVQKLTFEAYMNKKLVAARPLAHLKIGIKNIAHLT 394
>gi|296283169|ref|ZP_06861167.1| geranylgeranyl reductase [Citromicrobium bathyomarinum JL354]
Length = 397
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 209/401 (52%), Gaps = 26/401 (6%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTK 114
V+GGGP+G A LA+ G L++R KPCGGA+P ++ +F++P ++ +
Sbjct: 10 VVGGGPSGATIATELAREGHRVLLLDRA-GRIKPCGGAVPPRLLKDFEIPHHLLVARARS 68
Query: 115 MKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNF 174
+MI+PSN VD+ + Y+GMV R+V D +LRERA + GA G F ++ R
Sbjct: 69 ARMIAPSNRTVDM--PVGEIGYVGMVDRDVFDEWLRERAAEVGAERRTGTFETIE--REE 124
Query: 175 EQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAG--DYDYAIAFQERV 232
QP + Y E G GE R + VIGADGA S VA AG A+ E +
Sbjct: 125 GQPPTVCYREQRG-----GEIRRVRTRLVIGADGARSAVAAQNIAGAERMKCVFAYHEII 179
Query: 233 KIPDEKMVYYE-NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQL---A 288
+ P +++ + +++ +SPDFY WVFP + +VG G+ K F L
Sbjct: 180 QSPANDSDHFDASRCDVFYQGRLSPDFYAWVFPHGETASVGVGSAN-----KGFSLRGAV 234
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKS 347
R R ++ G + IR E PIP P R +G V + GDAAG V SGEGIY+A
Sbjct: 235 ARMRGDLELDGCETIRREGAPIPLRPLKRWDNGADVIVAGDAAGVVAPASGEGIYYAMMG 294
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GR A+A + G G + ++ + K +W VL ++Q +Y S+ RE FV
Sbjct: 295 GRCVAQAAAQFLATGQPAALRGARKAFMREHGKVFW----VLGMMQHFWYSSDKRRERFV 350
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
MCAD VQ++T+++Y+ KR+V P+ +++ + L+
Sbjct: 351 TMCADRDVQQLTWEAYMNKRLVRAKPVAHVRIFLKDCAHLL 391
>gi|291168933|gb|ADD81872.1| geranylgeranyl reductase [Lonicera tangutica]
Length = 127
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 113/126 (89%)
Query: 128 GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDG 187
GQTLKPHEYIGMVRRE+LDAYLR+RA GA+VINGLF+KMD P + PYVL+YT YD
Sbjct: 1 GQTLKPHEYIGMVRREILDAYLRDRAAGAGATVINGLFLKMDKPGDKTSPYVLHYTGYDT 60
Query: 188 TKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAE 247
G+GEKRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQER+KIPDEKMVYYENLAE
Sbjct: 61 KTSGMGEKRTLEVDAVIGADGANSRVAKSISAGDYEYAIAFQERIKIPDEKMVYYENLAE 120
Query: 248 MYVGDD 253
MYVGD+
Sbjct: 121 MYVGDE 126
>gi|121998381|ref|YP_001003168.1| geranylgeranyl reductase [Halorhodospira halophila SL1]
gi|121589786|gb|ABM62366.1| geranylgeranyl reductase [Halorhodospira halophila SL1]
Length = 405
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 142/391 (36%), Positives = 204/391 (52%), Gaps = 32/391 (8%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LA+ G E L++R KPCGGAIP V +F++P D+I V +M+SPS+ VD+
Sbjct: 30 LAQQGHEVLLLDRP-GRIKPCGGAIPPRAVQDFEIPDDMICATVGSARMVSPSDRHVDM- 87
Query: 129 QTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
P + Y+GMV REV D +LR RA + GA + F ++ E+ Y Y
Sbjct: 88 ----PIQDGYVGMVDREVFDEWLRSRAAEAGAQRRDATF------KHLEEGDGGVYIRYA 137
Query: 187 GTKGGV-GEKRTLEVDAVIGADGANSRVAKSI--NAGDYDYAIAFQERVKIP--DEKMVY 241
+GG E R + VIGADGANS V + A + A+ E ++ P E +
Sbjct: 138 QGRGGADAETRQVWARVVIGADGANSAVGRQAIEGATEIPQVAAYHEIIEAPAAGEDDRF 197
Query: 242 YENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLAT---RNRAKDKIL 298
A++Y +SPDFYGW+FP D V+VG G+ +K F L + + R +
Sbjct: 198 DPRRADVYYRGSISPDFYGWIFPHGDTVSVGAGSA-----VKGFSLRSAVEKLRQDAGLD 252
Query: 299 GGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIE 357
K +R E PIP HP R +GR V L GDAAG V SGEGIY+A G+ AEA+
Sbjct: 253 QAKTLRREGAPIPMHPLKRWDNGRNVVLAGDAAGTVAPASGEGIYYAMVGGQYAAEAVER 312
Query: 358 GSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQK 417
G D L + + + + + ++VL V+Q+ +Y +N RE FV +CAD VQ
Sbjct: 313 ALATG----DGAALAQAEKAFTRDHGQVFRVLGVMQRFWYTNNNRRERFVRICADPDVQA 368
Query: 418 MTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
+T+D+Y+ KR+V PL +++ I L
Sbjct: 369 LTWDAYMNKRLVRARPLAHMRIFFKNIAHLT 399
>gi|291168925|gb|ADD81869.1| geranylgeranyl reductase [Lonicera sempervirens]
Length = 132
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/131 (76%), Positives = 115/131 (87%)
Query: 123 VAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYY 182
VAVDIGQTL+PHEYIGMVRRE+LDAYLR+RA G ++INGLF+KMD P + PYVL+Y
Sbjct: 1 VAVDIGQTLEPHEYIGMVRREILDAYLRDRAAGAGTTIINGLFLKMDKPGDKTSPYVLHY 60
Query: 183 TEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYY 242
T YD G+G+KRTLEVDAVIGADGA+SRVAKSI+AGDY YAIAFQER++IPDEKM YY
Sbjct: 61 TGYDAKTSGMGKKRTLEVDAVIGADGADSRVAKSISAGDYQYAIAFQERIRIPDEKMQYY 120
Query: 243 ENLAEMYVGDD 253
ENLAEMYVGD+
Sbjct: 121 ENLAEMYVGDE 131
>gi|345870839|ref|ZP_08822789.1| geranylgeranyl reductase [Thiorhodococcus drewsii AZ1]
gi|343921308|gb|EGV32029.1| geranylgeranyl reductase [Thiorhodococcus drewsii AZ1]
Length = 398
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 139/385 (36%), Positives = 203/385 (52%), Gaps = 22/385 (5%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LAK G L++R KPCGGAIP + EFD+P + KV +MI+PS+ VD+
Sbjct: 25 LAKLGRSVCLLDRA-GRIKPCGGAIPPQAMREFDIPESALATKVYSARMIAPSDREVDM- 82
Query: 129 QTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
P + Y+GMV RE D +LRERA +NGA G F +++ R+ + V+++
Sbjct: 83 ----PIDGGYVGMVDREHFDEWLRERAAQNGAIRKTGTFERIE--RDSDGTAVIHFRS-- 134
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKSINAG--DYDYAIAFQERVKIPDEKMVYYEN 244
G GE ++ AVIGADGANS V K+ G Y A+ E V P + +
Sbjct: 135 GQDRINGEAESVRAKAVIGADGANSFVGKNYVPGYETVKYVSAYHEIVATPKDAD-FDGT 193
Query: 245 LAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIR 304
++Y D+SPDFYGWVFP D ++VG GT ++ R RA + + +R
Sbjct: 194 RCDVYYQGDISPDFYGWVFPHGDTISVGVGTAIPGFSMRSACTELRRRAG--LENAETLR 251
Query: 305 VEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGT 363
E PIP P +GR + L GDAAG V SGEGIY+A GRM EA+ E G
Sbjct: 252 REGAPIPLEPLKVWDNGRDILLAGDAAGCVAPASGEGIYYALACGRMAGEAVNEFCTTGN 311
Query: 364 RMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSY 423
+ +++++ K +W VL ++QK +Y S+ RE FV +CAD +Q +T+++Y
Sbjct: 312 PKALKKARQRFMKAHGKVFW----VLGIMQKFWYSSDKRRERFVSLCADPDIQHLTWEAY 367
Query: 424 LYKRVVPGNPLEDLKLAVNTIGSLV 448
+ KR+V P ++ + L+
Sbjct: 368 MNKRLVKARPGAHFRIFFKDLAHLL 392
>gi|90422815|ref|YP_531185.1| geranylgeranyl reductase [Rhodopseudomonas palustris BisB18]
gi|90104829|gb|ABD86866.1| geranylgeranyl reductase [Rhodopseudomonas palustris BisB18]
Length = 400
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 214/387 (55%), Gaps = 24/387 (6%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LAK+ + L++R KPCGGAIP ++ +F++P +I K+ +M+SPS+ VD+
Sbjct: 26 LAKDSRKVLLLDRA-GRIKPCGGAIPPRLIRDFNIPDHMIVAKINSARMVSPSDHRVDM- 83
Query: 129 QTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
P + ++GMV R V D +LR+RA GA GL+ +++ + + L + +
Sbjct: 84 ----PIDGGFVGMVDRAVFDEWLRKRAADGGAERRTGLYKRLE---HEDGGTTLVHYDER 136
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGDYDYAIAFQERVKIP-DEKMVYYE 243
+ G + EK T+ AVIGADGA S VA+ +A + A+ E V+ P + +Y
Sbjct: 137 SSDGTMVEK-TVRTRAVIGADGALSAVARQCIPDADKMPFVFAYHEIVRAPKNADGLYDA 195
Query: 244 NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKG-DIKKFQLATRNRAKDKILGGKI 302
++Y VSPDFYGWVFP D V+VGTG+ HKG +++ A R+ A + +
Sbjct: 196 ERCDVYYRGTVSPDFYGWVFPHGDTVSVGTGS-AHKGFSLRESVGALRDAA--GLSDVET 252
Query: 303 IRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSEN 361
IR E PIP HP PR GR V L GDAAG V SGEGIY+A GR+ A+AI + E
Sbjct: 253 IRKEGAPIPLHPLPRWDDGRNVLLAGDAAGVVAPASGEGIYYAMLGGRLAADAIDQFLET 312
Query: 362 GTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFD 421
G ++++ +W +L ++QK +Y ++ RE FV +C D VQK+T+D
Sbjct: 313 GDVAALATARKRFMRANGTVFW----ILGLMQKYWYSNDKRREQFVSICRDRDVQKLTWD 368
Query: 422 SYLYKRVVPGNPLEDLKLAVNTIGSLV 448
+Y+ K++V P+ +++ + +
Sbjct: 369 AYMNKKLVRAKPIAHVRIFFKNLAHMT 395
>gi|316935294|ref|YP_004110276.1| geranylgeranyl reductase [Rhodopseudomonas palustris DX-1]
gi|315603008|gb|ADU45543.1| geranylgeranyl reductase [Rhodopseudomonas palustris DX-1]
Length = 401
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 139/389 (35%), Positives = 212/389 (54%), Gaps = 27/389 (6%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LA+ G L++R KPCGGAIP + +F +P ++ K+ +M+SPSNV VD+
Sbjct: 26 LARAGKRVVLLDRA-GRIKPCGGAIPPRAIHDFAIPDSMLVAKIRSARMVSPSNVEVDM- 83
Query: 129 QTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
P + ++GMV RE D +LR+RA GA GLF + R+ ++Y E
Sbjct: 84 ----PIDGGFVGMVDREHFDEWLRQRAATVGAERRTGLFKR--FSRDESGVNTVHY-EAR 136
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGDYDYAIAFQERVKIP--DEKMVYY 242
G + ++ T+ A+IGADGA S VA+ +A + A+ E +K P ++K Y
Sbjct: 137 QADGSMADQ-TVRCRAIIGADGAVSGVARQFLPDADRVPFVFAYHEIIKTPRPEQKAAYE 195
Query: 243 ENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAK--DKILGG 300
++Y VSPDFYGWVFP D V+VGTG++ HKG + +A +A D++
Sbjct: 196 GARCDVYYQGQVSPDFYGWVFPHGDTVSVGTGSM-HKGFSLRDSVAELRKATGLDEV--- 251
Query: 301 KIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGS 359
+ IR E PIP HP PR G V L GDAAG V SGEGIY+A GR+ AEA+ E
Sbjct: 252 ETIRKEGAPIPLHPLPRWDDGHSVLLAGDAAGVVAPASGEGIYYALLGGRLAAEAVGEFL 311
Query: 360 ENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMT 419
+ D L+ +++ + +++L ++Q +Y ++ RE FV +C D VQK+T
Sbjct: 312 QTA----DAKALKLARKRFMRANGSVFRILGLMQWYWYANDKRREQFVNICRDRDVQKLT 367
Query: 420 FDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
+DSY+ K++V P+ +++ + +
Sbjct: 368 WDSYMNKKLVRAKPIAHVRIFFKNLAHMT 396
>gi|374619446|ref|ZP_09691980.1| geranylgeranyl reductase family protein [gamma proteobacterium
HIMB55]
gi|374302673|gb|EHQ56857.1| geranylgeranyl reductase family protein [gamma proteobacterium
HIMB55]
Length = 400
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 139/408 (34%), Positives = 208/408 (50%), Gaps = 24/408 (5%)
Query: 47 TNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLD 106
+N + V V+GGGP+G AA +A G L+ER KPCGGAIP C++GEFD+P
Sbjct: 4 SNTDFDVIVVGGGPSGATAAHEIALAGHSVLLLERAF-RIKPCGGAIPPCILGEFDIPRS 62
Query: 107 IIDRKVTKMKMISPSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGL 164
++ ++ +MISP VD+ P E ++GMV R+ D +LR RA++ GA +
Sbjct: 63 LLKAEIQSARMISPKAQKVDM-----PIEGTFVGMVDRDEFDPWLRLRAQRAGAELELAA 117
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS--INAGDY 222
F + + E V Y ++ + ++ R V+GADGA S+VA+ D
Sbjct: 118 FKSLKY-LDEETIEVTYVSKDEESQVCTATAR-----CVLGADGARSKVARQGVPKYADI 171
Query: 223 DYAIAFQERVKIPDEKMVYYE-NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD 281
+ +A+ E V+ P Y+ E++ +SPDFY WVFP ++G G+ D
Sbjct: 172 PWVLAYHEIVEAPSAATEDYDPERCEVWYQGKLSPDFYAWVFPHGTSASIGVGSAFK--D 229
Query: 282 IKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALV-GDAAGYVTKCSGEG 340
R+ + IR E PIP P R G+ LV GDAAG V SGEG
Sbjct: 230 FSAKDSVAELRSISGLDDAPTIRKEGAPIPMKPMKRWDDGKGILVSGDAAGVVAPASGEG 289
Query: 341 IYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSN 400
IY+A GR+ A+AI E G + +++++ +T+W L +LQ +Y S+
Sbjct: 290 IYYAMLCGRLSADAIKEFLVTGKASALKAPRKRFMKLHGRTFW----ALGLLQYFWYHSD 345
Query: 401 PAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
RE FVEMC DE VQ +T+ SY K++V E L++ + + L+
Sbjct: 346 KRREQFVEMCKDEDVQTLTWQSYTQKKLVKKKRKEHLRVFLKDVAQLL 393
>gi|288942347|ref|YP_003444587.1| geranylgeranyl reductase [Allochromatium vinosum DSM 180]
gi|288897719|gb|ADC63555.1| geranylgeranyl reductase [Allochromatium vinosum DSM 180]
Length = 396
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 205/384 (53%), Gaps = 22/384 (5%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LAK G L++R KPCGGAIP + +FDLP ++ +V+ +MISPS+ VD+
Sbjct: 25 LAKAGRSVCLLDRA-GRIKPCGGAIPPQAMRDFDLPESVLANRVSSARMISPSDRKVDMP 83
Query: 129 QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGT 188
+ Y+G+V RE D +LR RA ++GA+ G F K++ R+ + ++ Y G
Sbjct: 84 IQ---NGYVGLVDREHFDEWLRARAAESGATRRTGTFEKIE--RDTDGTAIVVYRPGQGR 138
Query: 189 KGGVGEKRTLEVDAVIGADGANSRVAKSINAG--DYDYAIAFQERVKIPDEKMVYYENLA 246
E+ + AVIGADGANS V K G Y A+ E ++ P + +
Sbjct: 139 NDSPSEQ--IRARAVIGADGANSFVGKHYVPGYETVKYVSAYHEILRTPPG---FDGSRC 193
Query: 247 EMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILG-GKIIRV 305
++Y D+SPDFYGWVFP D ++VG GT ++ RA LG +I+R
Sbjct: 194 DVYYQGDISPDFYGWVFPHGDTISVGVGTAVPGFSLRAACTELSRRAG---LGDAEILRR 250
Query: 306 EAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTR 364
E PIP P +GR + L GDAAG V SGEGIY+A GR+ A+A+ E G
Sbjct: 251 EGAPIPLEPLKCWDNGRDILLAGDAAGVVAPASGEGIYYAMMGGRLAAQAVDEFCRTGDP 310
Query: 365 MIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYL 424
+ +++++ K +W VL ++Q+ +Y S+ RE FV +CAD +Q +T+++Y+
Sbjct: 311 KALKQARKRFMKDHGKVFW----VLGIMQRFWYSSDKRRERFVSLCADPDIQYLTWEAYM 366
Query: 425 YKRVVPGNPLEDLKLAVNTIGSLV 448
KR+V P L++ + L+
Sbjct: 367 NKRLVKARPGAHLRIFFKDMAHLL 390
>gi|344338396|ref|ZP_08769328.1| geranylgeranyl reductase [Thiocapsa marina 5811]
gi|343801678|gb|EGV19620.1| geranylgeranyl reductase [Thiocapsa marina 5811]
Length = 401
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 195/385 (50%), Gaps = 19/385 (4%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LAK G L++R KPCGGAIP + EF++P ++ +V +M+SPS+ VD+
Sbjct: 25 LAKRGRRVLLLDRG-GRIKPCGGAIPPQAMREFEIPESMLANQVNSARMVSPSDQRVDMP 83
Query: 129 QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGT 188
Y+GMV RE D +LRERA + GA G F ++ R+ + ++ Y G
Sbjct: 84 IN---GGYVGMVDREHFDEWLRERAAQAGAERRTGTFEAVE--RDTDGTALIRYRPGAGR 138
Query: 189 KGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGDYDYAIAFQERVKIPDE--KMVYYEN 244
G E+ + AVIGADGA+S V K A Y A+ E V+ PD +
Sbjct: 139 SGNESER--VRARAVIGADGAHSAVGKQCVPGADKIKYVAAYHEIVRTPDNGGPADFDGT 196
Query: 245 LAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIR 304
++Y D+SPDFYGWVFP D +VG GT +K R RA + + +R
Sbjct: 197 RCDVYYQGDISPDFYGWVFPHGDTTSVGVGTAVEGFSLKSATTELRRRAG--LEHAETLR 254
Query: 305 VEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGT 363
E PIP P R +GR + L GDAAG V SGEGIY+A GR+ +A+ G
Sbjct: 255 REGAPIPLKPLKRWDNGRDLVLAGDAAGVVAPASGEGIYYALVGGRLAGDAVDTFLATGD 314
Query: 364 RMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSY 423
+ +++ K +W VL ++Q +Y S+ RE FV MC D VQ +T+D+Y
Sbjct: 315 ARALKSARAHFMKAHGKVFW----VLGMMQYFWYSSDKRRERFVSMCKDPDVQSLTWDAY 370
Query: 424 LYKRVVPGNPLEDLKLAVNTIGSLV 448
+ KR+V P L++ + L+
Sbjct: 371 MNKRLVRAKPAAHLRVFFKDMAHLL 395
>gi|39934604|ref|NP_946880.1| geranylgeranyl reductase [Rhodopseudomonas palustris CGA009]
gi|192290119|ref|YP_001990724.1| geranylgeranyl reductase [Rhodopseudomonas palustris TIE-1]
gi|39648453|emb|CAE26974.1| geranylgeranyl reductase [Rhodopseudomonas palustris CGA009]
gi|192283868|gb|ACF00249.1| geranylgeranyl reductase [Rhodopseudomonas palustris TIE-1]
Length = 401
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 212/389 (54%), Gaps = 27/389 (6%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LA+ G L++R KPCGGAIP + +F +P ++ K+ +M+SPSNV VD+
Sbjct: 26 LARAGKRVVLLDRA-GRIKPCGGAIPPRAIRDFAIPDSMLVAKINAARMVSPSNVEVDM- 83
Query: 129 QTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
P + ++GMV RE D +LR+RA GA GLF + R+ ++Y E
Sbjct: 84 ----PIDGGFVGMVDREHFDEWLRQRAATVGAERRTGLFKR--FSRDESGVNTVHY-EGR 136
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGDYDYAIAFQERVKIP--DEKMVYY 242
G G + ++ T+ A+IGADGA S VA+ +A + A+ E +K P ++K Y
Sbjct: 137 GPDGSMIDQ-TVRCRAIIGADGAVSGVARQFLKDADRVPFVFAYHEIIKAPTAEQKAAYE 195
Query: 243 ENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLAT--RNRAKDKILGG 300
++Y VSPDFYGWVFP + V+VGTG++ HKG + +A + D++
Sbjct: 196 SRRCDVYYQGHVSPDFYGWVFPHGNTVSVGTGSM-HKGFSLRDSVAELRKQTGLDEV--- 251
Query: 301 KIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGS 359
+ IR E PIP HP PR G V L GDAAG V SGEGIY+A GR+ AEA+
Sbjct: 252 ETIRKEGAPIPLHPLPRWDDGHSVLLAGDAAGVVAPASGEGIYYALLGGRLAAEAV---- 307
Query: 360 ENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMT 419
E + D L+ +++ + +++L ++Q +Y ++ RE FV +C D VQK+T
Sbjct: 308 EEFLQTADAKALKLARKRFMRGNGSVFRILGLMQWYWYANDKRREQFVSICRDRDVQKLT 367
Query: 420 FDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
+D+Y+ K++V P+ +++ + +
Sbjct: 368 WDAYMNKKLVRAKPIAHVRIFFKNLAHMT 396
>gi|304393721|ref|ZP_07375649.1| geranylgeranyl hydrogenase [Ahrensia sp. R2A130]
gi|303294728|gb|EFL89100.1| geranylgeranyl hydrogenase [Ahrensia sp. R2A130]
Length = 398
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/392 (34%), Positives = 207/392 (52%), Gaps = 36/392 (9%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LA G + L++R KPCGGAIP + +FD+P + I ++ +MI+PS+ VD+
Sbjct: 26 LASRGHDVVLLDRA-GRIKPCGGAIPPRAIEDFDIPAEQICARIRSARMIAPSDKGVDM- 83
Query: 129 QTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
P E ++GMV RE D +LR RA KNGA+ + G F + RN + + Y
Sbjct: 84 ----PIENGFVGMVDREHFDEWLRVRATKNGATRVTGTFD--GITRNADGTVDVSY---- 133
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGDYDYAIAFQERVKIP---DEKMVY 241
K G+ RT+ VIGADGA S+V K+ Y A+ E V +P ++ Y
Sbjct: 134 --KDSGGQSRTITASMVIGADGAKSKVLKTAMPKVKPAPYVFAYHEIVDVPEAINDNAAY 191
Query: 242 YENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV----THKGDIKKFQLATRNRAKDKI 297
N ++Y +SPDFY WVFP ++G G+ + +G + + RN D +
Sbjct: 192 MANRCDVYYQGKLSPDFYAWVFPHGKTASIGVGSAKKGFSLRGAVADLR---RNTGLDDM 248
Query: 298 LGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAII 356
++R E PIP P R G+ V ++GDAAG V SGEGIY+A GRM AEA+
Sbjct: 249 ---PLVRHEGAPIPMKPIKRWDDGKNVIVIGDAAGCVAPASGEGIYYAMACGRMGAEAVE 305
Query: 357 EGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQ 416
+ G + +L++ K +W VL +LQ +Y + RE FV++C D+ VQ
Sbjct: 306 LALQTGDAKHLASARKAFLKEHGKVFW----VLGILQYFWYGGDRRRERFVKICEDKDVQ 361
Query: 417 KMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
++T++SY++KR+V P+ +++ +G L+
Sbjct: 362 RLTWESYMHKRLVKREPMAHVRVFFKDMGHLL 393
>gi|344342843|ref|ZP_08773713.1| geranylgeranyl reductase [Marichromatium purpuratum 984]
gi|343805395|gb|EGV23291.1| geranylgeranyl reductase [Marichromatium purpuratum 984]
Length = 396
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 134/388 (34%), Positives = 206/388 (53%), Gaps = 30/388 (7%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LAK G L++R KPCGGAIP + EFD+P + +V +M++PSN VD+
Sbjct: 25 LAKRGRSVLLLDRP-GRIKPCGGAIPPQAMREFDIPEAQLATRVYSARMVAPSNRTVDM- 82
Query: 129 QTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
P + Y+GMV R+ D +LRERA ++GA+ ++ F ++ R+ + ++ Y
Sbjct: 83 ----PIDGGYVGMVDRKDFDEWLRERAAEHGATRLDATFETIE--RDADGTALVRYRPGQ 136
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKSINAG--DYDYAIAFQERVKIPDEKMVYYEN 244
G GE + AVIGADGA+S VAK G Y A+ E V+ P+ +
Sbjct: 137 GRDS--GEPLQVRARAVIGADGAHSAVAKQCVPGAEKMKYVAAYHEIVRTPEG---FDGT 191
Query: 245 LAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQL---ATRNRAKDKILGGK 301
++Y D+SPDFYGWVFP D ++VG GT +I F L T R + + +
Sbjct: 192 RCDVYYQGDISPDFYGWVFPHGDTISVGVGT-----EISGFSLRSACTELRKRAGLAEVE 246
Query: 302 IIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
+R E PIP P +GR V L GDAAG V SGEGIY+A GR+ EA+ E
Sbjct: 247 TLRCEGAPIPLEPLRCWDNGRDVVLAGDAAGVVAPASGEGIYYALLGGRLAGEAVEEMLA 306
Query: 361 NGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTF 420
G + +++++ + +W +L ++Q+ +Y ++ RE FV +CAD VQ +T+
Sbjct: 307 TGKASALKLARKRFIKDHGRVFW----ILGIMQRFWYANDKRRERFVSICADPDVQYLTW 362
Query: 421 DSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
++Y+ KR+V P +++ + L+
Sbjct: 363 EAYMNKRLVRAKPTAHIRIFFKDLAHLL 390
>gi|61699159|gb|AAX53583.1| BchP [Thiocapsa roseopersicina]
Length = 401
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 195/385 (50%), Gaps = 19/385 (4%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LA+ G L++R KPCGGAIP + EF++P ++ +V +M+SPS+ VD+
Sbjct: 25 LARRGRRVLLLDRG-GRIKPCGGAIPPQAMREFEIPESMLANQVNSARMVSPSDQRVDMP 83
Query: 129 QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGT 188
Y+GMV RE D +LRERA + GA G F ++ R+ + ++ Y G
Sbjct: 84 IN---GGYVGMVDREHFDEWLRERAAQAGAERRTGTFEAVE--RDTDGTALIRYRPGAGR 138
Query: 189 KGGVGEKRTLEVDAVIGADGANSRVAKSINAGD--YDYAIAFQERVKIPDE--KMVYYEN 244
G E+ + AVIGADGA+S V K G Y A+ E V+ P +
Sbjct: 139 SGNESER--VRARAVIGADGAHSSVGKQCVPGADMIKYVAAYHEIVRTPANGGPADFDGT 196
Query: 245 LAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIR 304
++Y D+SPDFYGWVFP D +VG GT +K R RA + + +R
Sbjct: 197 RCDVYYQGDISPDFYGWVFPHGDTTSVGVGTAVEGFSLKSATTELRRRAG--LEHAETLR 254
Query: 305 VEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGT 363
E PIP P R +GR + L GDAAG V SGEGIY+A GR+ +A+ G
Sbjct: 255 REGAPIPLKPLKRWDNGRDLVLAGDAAGVVAPASGEGIYYALVGGRLAGDAVDTFLATGD 314
Query: 364 RMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSY 423
+ ++++ K +W VL ++Q +Y S+ RE FV MC D VQ +T+D+Y
Sbjct: 315 ARALKTARARFMKAHGKVFW----VLGMMQYFWYSSDKRRERFVSMCKDPDVQSLTWDAY 370
Query: 424 LYKRVVPGNPLEDLKLAVNTIGSLV 448
+ KR+V P L++ + L+
Sbjct: 371 MNKRLVRAKPAAHLRVFFKDMAHLL 395
>gi|291168879|gb|ADD81848.1| geranylgeranyl reductase [Symphoricarpos occidentalis]
Length = 125
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/123 (77%), Positives = 108/123 (87%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
L PHEYIGMVRRE+LDAYLR+RA GA+VING+F+KMD P + PYVL+YT YD
Sbjct: 2 LFPHEYIGMVRREILDAYLRDRAAHAGATVINGIFLKMDKPSDKTSPYVLHYTGYDAKTS 61
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYV 250
G+G+KRTLEVDAVIGADGANSRVAKSI+AGDY+YAIAFQER+KIPDEKM YYENLAEMYV
Sbjct: 62 GMGDKRTLEVDAVIGADGANSRVAKSISAGDYEYAIAFQERIKIPDEKMQYYENLAEMYV 121
Query: 251 GDD 253
GD+
Sbjct: 122 GDE 124
>gi|350551422|ref|ZP_08920637.1| geranylgeranyl reductase [Thiorhodospira sibirica ATCC 700588]
gi|349797032|gb|EGZ50810.1| geranylgeranyl reductase [Thiorhodospira sibirica ATCC 700588]
Length = 405
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 137/388 (35%), Positives = 201/388 (51%), Gaps = 28/388 (7%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LA+ G L++R KPCGGAIP + EF++P D++ V +MISPSN V++
Sbjct: 27 LARLGRSVLLLDRG-GRIKPCGGAIPPRAMEEFEIPKDMLVATVASARMISPSNHKVNM- 84
Query: 129 QTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
P E Y+GMV RE D +LRERA +NGA G F + L R+ + V+ Y
Sbjct: 85 ----PIENGYVGMVDREPFDEWLRERAAENGAVRCTGTFDR--LLRDDDGTAVIQY---- 134
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKSINAG--DYDYAIAFQERVKIPD---EKMVY 241
GE + AVIGADGANS VA+ G Y A+ E +K P+ E + +
Sbjct: 135 --HARTGEPEQVRARAVIGADGANSTVARQCIPGAEKMRYVFAYHEIIKTPETVSEAVDF 192
Query: 242 YENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGK 301
++Y +SPDFY W+FP ++VG G+ HKG Q R + +
Sbjct: 193 DPTRCDVYYQGKLSPDFYAWIFPHGTTISVGVGSA-HKG-FSLRQAVAELRKDTGLDQTE 250
Query: 302 IIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
+R E PIP P +GR V L GDAAG V SGEGIY+A GR+ AE++
Sbjct: 251 TLRSEGAPIPLKPLRVWDNGRDVLLAGDAAGVVAPASGEGIYYAMLGGRLAAESVDAYLT 310
Query: 361 NGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTF 420
G D L+ +++ K + + +L ++Q +Y ++ RE FV MC D VQ++T+
Sbjct: 311 TG----DASKLKLARKRFHKDHGRVFWILGIMQHFWYANDKRRERFVMMCKDPDVQRLTW 366
Query: 421 DSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
+SY++K++ +PL +K+ L+
Sbjct: 367 ESYMHKKLTRKSPLAHIKIFFKDTAHLL 394
>gi|374622991|ref|ZP_09695509.1| geranylgeranyl reductase [Ectothiorhodospira sp. PHS-1]
gi|373942110|gb|EHQ52655.1| geranylgeranyl reductase [Ectothiorhodospira sp. PHS-1]
Length = 395
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 210/386 (54%), Gaps = 26/386 (6%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LAK G + L++R+ KPCGGAIP ++ EFD+P +++ K+ +M SPS+ VD+
Sbjct: 25 LAKAGRKVLLLDRE-GRIKPCGGAIPPILMTEFDVPEEVLVAKIRCARMFSPSDRKVDM- 82
Query: 129 QTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
P + Y+GMV R+ D +LR+RAE+ GA G + K+D R+ + V+ Y D
Sbjct: 83 ----PIDGGYVGMVDRKTFDPWLRDRAEQAGAERRVGTYEKID--RDADGTAVVRYKNAD 136
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKS--INAGDYDYAIAFQERVKIPDEKMVYYE- 243
GV + AVIGADGA S VA+ A + A+ E + P Y+
Sbjct: 137 DEVVGVRAR------AVIGADGARSSVARQEVPGADKIPHVAAYHEIISRPTNPEAEYDP 190
Query: 244 NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKII 303
++Y +SPDFY WVFP D V+VG G+ H+G K + +A + +++
Sbjct: 191 ERCDVYYRGSLSPDFYAWVFPHGDTVSVGVGS-AHRGFSLKGAVDELRKAA-GMEDCEVL 248
Query: 304 RVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENG 362
R E PIP +P +GR V L GDAAG V SGEGIY+A GR+ AEA+ +G
Sbjct: 249 RREGAPIPLYPMKCWDNGRDVLLAGDAAGVVAPASGEGIYYAMLGGRLAAEAVHSFLTSG 308
Query: 363 TRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDS 422
DL+ +++ K + + VL ++Q+ +Y ++ RE FV +C D+ VQ +T+ S
Sbjct: 309 K----PADLKLARKRFMKLHGQVFWVLGIMQRFWYINDKRRERFVAICRDKDVQDLTWQS 364
Query: 423 YLYKRVVPGNPLEDLKLAVNTIGSLV 448
Y+YK++V PL +++ +G L+
Sbjct: 365 YMYKKLVRTRPLAQIRIFFKDMGHLL 390
>gi|254282611|ref|ZP_04957579.1| geranylgeranyl reductase [gamma proteobacterium NOR51-B]
gi|219678814|gb|EED35163.1| geranylgeranyl reductase [gamma proteobacterium NOR51-B]
Length = 399
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 144/410 (35%), Positives = 208/410 (50%), Gaps = 27/410 (6%)
Query: 47 TNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLD 106
+ V VIGGGPAG AA LA G ++ER KPCGGAIP + FD+P
Sbjct: 4 STEQFDVVVIGGGPAGATAANDLACQGKRVLIVERGF-RIKPCGGAIPPAAIDAFDIPQS 62
Query: 107 IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFM 166
+ ++ +MISP N VD+ Y+GMV R+ D +LR RA NGA V G F
Sbjct: 63 QLVARIKSARMISPKNKRVDMPIA---DSYVGMVDRKDFDPWLRARAASNGAEVRTGNFS 119
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGDYDY 224
++ + E +L Y + + V ++ AVIGADGA S+V K A
Sbjct: 120 QLKYLDSGE--VLLTYRDKSPEQKEV----SVLTRAVIGADGAKSKVGKQCVPGADKIKS 173
Query: 225 AIAFQERVKIP--DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDI 282
A+ E VK P D Y +++ +SPDFY WVFP DH ++G G+ +
Sbjct: 174 VFAYHEIVKAPAADSSADYKPTRCDVWYQGRLSPDFYAWVFPHGDHASIGMGSA-----V 228
Query: 283 KKF---QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSG 338
K F Q + RA + + +R E PIP P + GR V L GDAAG V SG
Sbjct: 229 KSFSATQSVRQLRADVGLTNAETVRREGAPIPLKPLKKWDDGRAVLLAGDAAGVVAPASG 288
Query: 339 EGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398
EGI++A GR+ A+A+++ +G D LR+ +++ K + + VL +LQ +Y
Sbjct: 289 EGIFYAMLGGRLAADAVLQFLAHG----DPAALRQARKRFMKEHGRVFWVLGLLQAFWYG 344
Query: 399 SNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
S+ RE FV MC D VQ++T+ SY K++V P+ ++ + + L+
Sbjct: 345 SDKRREKFVHMCDDPDVQRLTWQSYTQKKLVRSEPMAHFRVFMKDMAQLL 394
>gi|384260461|ref|YP_005415647.1| geranylgeranyl reductase [Rhodospirillum photometricum DSM 122]
gi|378401561|emb|CCG06677.1| Geranylgeranyl reductase BchP [Rhodospirillum photometricum DSM
122]
Length = 427
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 207/387 (53%), Gaps = 29/387 (7%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSN--VAVD 126
LA G L++R+ KPCGGAIP + +FD+P ++ KV +M++PS V +
Sbjct: 58 LALAGFAVVLLDRE-GRIKPCGGAIPPRAMRDFDIPEAVLCAKVHGARMVAPSGRVVLMP 116
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
IG+ Y+GMV R+ D +LRERA GA + G F ++ R + V+ Y D
Sbjct: 117 IGEG-----YVGMVDRQTFDPWLRERAATAGARRVAGTFRALE--REDDGTAVVVYRAKD 169
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIA-FQERVKIPDEKMVYYENL 245
+ ++ L AVIGADGA S VA++ + +A + E V+ P + ++
Sbjct: 170 AAEDAPEQR--LRTRAVIGADGALSLVARAALPDETLPTVAAYHEIVRTPAG---FDASV 224
Query: 246 AEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILG---GKI 302
+++ +SPDFYGWVFP D ++VG GT ++K F L R +G +
Sbjct: 225 CDVWYQGRISPDFYGWVFPHGDTISVGVGT-----EVKGFSLRDATRLLRDAVGLSEVET 279
Query: 303 IRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSEN 361
+R E PIP PR R +GR V L GDAAG V SGEGIY+A +SGR A A+ ++
Sbjct: 280 LRSEGAPIPLRPRKRWDNGRDVLLAGDAAGVVAPSSGEGIYYALESGRQAARAVERFLKS 339
Query: 362 GTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFD 421
G R++L WD + +L+++Q+ +Y S+ RE FV +CAD +Q+MT+D
Sbjct: 340 GNPACLGEARRRFL--WDHGL--VFWILEMMQRFWYVSDERRERFVALCADPTIQRMTWD 395
Query: 422 SYLYKRVVPGNPLEDLKLAVNTIGSLV 448
+Y+ KR+ +P+ ++ I L+
Sbjct: 396 AYMNKRLSWRDPVALTRIFFKNIAHLL 422
>gi|170741871|ref|YP_001770526.1| geranylgeranyl reductase [Methylobacterium sp. 4-46]
gi|168196145|gb|ACA18092.1| geranylgeranyl reductase [Methylobacterium sp. 4-46]
Length = 402
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 211/416 (50%), Gaps = 26/416 (6%)
Query: 37 VSAAKTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLC 96
S A S ++N L V+GGGPAG AA LA+ G L++ K KPCGGAIP
Sbjct: 2 TSTAMMSTPVSNAVLDAVVVGGGPAGATAATDLARLGRRVLLLD-KAGRIKPCGGAIPPR 60
Query: 97 MVGEFDLPLDIIDRKVTKMKMISPSNVAVD--IGQTLKPHEYIGMVRREVLDAYLRERAE 154
++ +F +P D++ ++ +M+SP+N AVD +G+ ++GMV R D +LR RA
Sbjct: 61 LIRDFAIPDDLLVARIRSARMVSPANRAVDMPVGEG-----FVGMVDRAPFDEWLRNRAA 115
Query: 155 KNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVA 214
GA G F++ L R + ++ D GE + VIGADGA S V
Sbjct: 116 LAGAERRTGTFLR--LTREGDGLVTVHLRRRD------GEAEAVRTRLVIGADGAASAVG 167
Query: 215 KSINAGD--YDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVG 272
+ G A+ E V+ P + ++Y +SPDFY W+FP D +++G
Sbjct: 168 RQEIPGHARMRQVFAYHEVVRTPASG-AFEAARCDVYYQGALSPDFYAWIFPHGDTLSIG 226
Query: 273 TGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAG 331
TG+ ++ Q R R + G+ +R E P+P P PR +GR V L GDAAG
Sbjct: 227 TGSARKGFSLR--QAVGRLREATGLDAGETLRREGAPLPLKPLPRFDNGRDVLLTGDAAG 284
Query: 332 YVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDV 391
V SGEGIY+A GR+ AEA+ E G R++L+ + +W +L +
Sbjct: 285 LVAPASGEGIYYAMLGGRLAAEAVHECLATGDARALAQARRRFLKAHGRVFW----ILRL 340
Query: 392 LQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSL 447
+Q V+YR++ RE FV +C D VQ +T+DSY+ K +V P ++ + L
Sbjct: 341 MQTVWYRNDALRERFVSICRDPDVQSLTWDSYMNKELVRARPAAHARIFFKDLAHL 396
>gi|209965368|ref|YP_002298283.1| geranylgeranyl reductase BchP [Rhodospirillum centenum SW]
gi|209958834|gb|ACI99470.1| geranylgeranyl reductase BchP [Rhodospirillum centenum SW]
Length = 399
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 210/386 (54%), Gaps = 24/386 (6%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LA+ G + L++ K KPCGGAIP + +FD+P ++ K+T +MISPS AVD+
Sbjct: 25 LARAGRKVLLLD-KAGRIKPCGGAIPPRAIRDFDIPDALLVAKITSARMISPSGKAVDM- 82
Query: 129 QTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
P + ++GMV R+V D +LR+RA +GA G F +D R+ + ++ Y +
Sbjct: 83 ----PIDGGFVGMVDRDVFDEWLRKRAATSGADRRTGTFEALD--RDTDGTAIVRY-QPK 135
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAK-SINAGDYDYAIAFQERVKIPDEKM---VYY 242
G+ G E ++ VIGADGANS VA+ ++ A+ E ++ P +
Sbjct: 136 GSPDGTLE--SVRARVVIGADGANSAVARLALPDEQVPLVFAYHEIIETPADARPGGTVD 193
Query: 243 ENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKI 302
++Y SPDFY WVFP ++GTG++ HKG + +A R K+ G +
Sbjct: 194 GARCDVYYQGKFSPDFYSWVFPHGPATSIGTGSM-HKGFSLRGSIADL-RVALKLDGCRT 251
Query: 303 IRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSEN 361
IR E PIP PR R +GR V L GDAAG V SGEGIY+A GR+ AEA+ +
Sbjct: 252 IRKEGAPIPLKPRKRWDNGRDVLLAGDAAGVVAPASGEGIYYALACGRVAAEAVDGFLKT 311
Query: 362 GTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFD 421
G D +L + +++ K + + +L +LQK +Y S+ RE FV +C D+ VQK+T++
Sbjct: 312 G----DVRELAQARKRFMKAHGRVFWILGILQKFWYSSDKRRERFVSICQDKDVQKLTWE 367
Query: 422 SYLYKRVVPGNPLEDLKLAVNTIGSL 447
+Y+ K +V P +++ + L
Sbjct: 368 AYMNKELVRARPAAHVRIFFKDLAHL 393
>gi|217978218|ref|YP_002362365.1| geranylgeranyl reductase [Methylocella silvestris BL2]
gi|217503594|gb|ACK51003.1| geranylgeranyl reductase [Methylocella silvestris BL2]
Length = 399
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 136/399 (34%), Positives = 211/399 (52%), Gaps = 32/399 (8%)
Query: 60 PAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMIS 119
P+G AA LA G + L++R KPCGGAIP ++ +FD+P ++ ++ +M+S
Sbjct: 16 PSGATAAHDLACAGRKVLLLDRA-GRIKPCGGAIPPRLMRDFDIPAHLLVARINCARMVS 74
Query: 120 PSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQP 177
PS VD+ P E Y+GM+ REV D +LR RAE GA G F + R +
Sbjct: 75 PSGKRVDM-----PIEGGYVGMIDREVFDEWLRARAEAAGALRRTGAFER--FSRGEDDV 127
Query: 178 YVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGDYDYAIAFQERVKIP 235
++ + D E+ + +VIGADGA S VA+ +AG Y A+ E ++ P
Sbjct: 128 AIVQFRTRDAKGAETFER--VRAQSVIGADGALSLVARQAVPHAGQPKYVFAYHEIIRSP 185
Query: 236 DEKMVYYE--NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGT----VTHKGDIKKFQLAT 289
+++ Y+ +Y G +SPDFY W+FP +VGTGT ++ K +K + AT
Sbjct: 186 EKRSEDYDAARCDVIYRGA-ISPDFYSWIFPHGATASVGTGTARKGLSLKDAVKTLRQAT 244
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSG 348
+ G + +R E PIP P R +GR V L GDAAG V SGEGIY+A G
Sbjct: 245 ------GLGGAETLRREGAPIPLRPLRRWDNGRDVVLAGDAAGVVAPASGEGIYYAMVGG 298
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVE 408
R AEA+ G D L++ ++ K + + +L ++Q +Y S+ RE+FV+
Sbjct: 299 RYAAEAVEALLATG----DARALKRARSRFMKEHGRVFWILGIMQYFWYGSDKRRESFVK 354
Query: 409 MCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSL 447
+C D VQ++TFD+Y+ K++ +P+ +++ + L
Sbjct: 355 ICEDRDVQRLTFDAYMNKQLRRADPMAHVRIFFKDLAHL 393
>gi|407782346|ref|ZP_11129559.1| geranylgeranyl reductase [Oceanibaculum indicum P24]
gi|407206076|gb|EKE76038.1| geranylgeranyl reductase [Oceanibaculum indicum P24]
Length = 403
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/401 (32%), Positives = 209/401 (52%), Gaps = 16/401 (3%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
VAVIGGGP+G AAE LA+ G L++ D KPCGGAIP + +F +P + +
Sbjct: 7 VAVIGGGPSGATAAEQLARAGYRVALVD-PADRIKPCGGAIPSRALKDFSIPESQLVSRA 65
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPR 172
++I+PS +VD+ + ++GMV R D +LR RA + GA + G + L
Sbjct: 66 HGARIIAPSGRSVDM--QIGDRGFVGMVDRATFDPWLRARAARAGAEPVTGRLI--GLAE 121
Query: 173 NFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGDYDYAIAFQE 230
+ + + G L VIGADGANS V + A Y A+ E
Sbjct: 122 EADGCMAVVVRPSRSSPGATDLDLILRARLVIGADGANSAVRRLAFPAAKKPRYVFAYHE 181
Query: 231 RVKIP--DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLA 288
V+ P + ++ ++ +SPDFYGWVFP + +VGTGT D+++ A
Sbjct: 182 IVETPVSETPAGFHPARCDVVYDGRISPDFYGWVFPHGPYSSVGTGTAVKGHDLRQATAA 241
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKS 347
R + G + +R E P+P R +GR + L+GDAAG V SGEGIY+A
Sbjct: 242 LRR--ASGLEGCRTVRREGAPLPLKAMRRWDNGRNILLIGDAAGTVAPSSGEGIYYAMLC 299
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
G++ A+A+++ +G L++ ++ + + + +L ++Q V+YR++ RE FV
Sbjct: 300 GQLAADAVVDCLASG----QAAPLKQVRRRFMREHGRVFLILGIMQSVWYRNDRLREKFV 355
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
MCAD +Q++T++SYL K++ +PL +++ + L+
Sbjct: 356 TMCADPDIQRLTWESYLDKKLTRRDPLAHIRIFFKDLAQLL 396
>gi|334133131|ref|ZP_08506886.1| Geranylgeranyl diphosphate reductase [Methyloversatilis universalis
FAM5]
gi|333442041|gb|EGK70013.1| Geranylgeranyl diphosphate reductase [Methyloversatilis universalis
FAM5]
Length = 389
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 136/386 (35%), Positives = 198/386 (51%), Gaps = 31/386 (8%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LA G L++R KPCGGAIP + EF +P +++ + +M+SPS VD+
Sbjct: 22 LAHRGYAVLLLDRG-GRIKPCGGAIPPKAIEEFRIPDELLVARARSARMVSPSGREVDM- 79
Query: 129 QTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
P + ++GMV RE D YLRERAE GA G F+++ R+ V++Y
Sbjct: 80 ----PIDGGFVGMVDREQFDEYLRERAELAGAHRRTGRFLRVS--RDGAGSAVIHYR--- 130
Query: 187 GTKGGVGEK--RTLEVDAVIGADGANSRVAKSI--NAGDYDYAIAFQERVKIPDEKMVYY 242
VGE+ R + A+IGADGA S V + A + A+ E V+ P +
Sbjct: 131 -----VGEQGERCVRARAIIGADGALSEVGRQCVPGADEVPCVFAYHEIVRAPQAG--FD 183
Query: 243 ENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKI 302
+ ++Y +SPDFYGWVFP D V+VG G+ I+ A R+ A G
Sbjct: 184 GSRCDVYYQGRLSPDFYGWVFPHGDTVSVGVGSARKGFSIRGGVSALRDSAGLGSAG--T 241
Query: 303 IRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSEN 361
+R E PIP P R +GR V L GDAAG V SGEGIY+A GR+ AEA+
Sbjct: 242 VRREGAPIPMRPLRRWDNGRDVVLAGDAAGVVAPASGEGIYYALSGGRLAAEAVDTYLVT 301
Query: 362 GTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFD 421
G D L +++ K + + VL ++Q+ +Y S+ RE FV +C D VQ +T+
Sbjct: 302 G----DARALGLARKRFMKAHGRVFMVLGIMQRFWYASDRRRERFVSICRDPDVQHLTWQ 357
Query: 422 SYLYKRVVPGNPLEDLKLAVNTIGSL 447
+Y++KR+V PL +++ + L
Sbjct: 358 AYMHKRLVRARPLAHMRIFFKDLAHL 383
>gi|431930336|ref|YP_007243382.1| geranylgeranyl reductase [Thioflavicoccus mobilis 8321]
gi|431828639|gb|AGA89752.1| geranylgeranyl reductase family protein [Thioflavicoccus mobilis
8321]
Length = 398
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 200/389 (51%), Gaps = 29/389 (7%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LA+ G +++R KPCGGAIP ++ +F +P ++ +VT +M+SP+ VD+
Sbjct: 25 LARAGRRVLMLDRA-GRIKPCGGAIPPRLIRDFAIPESLLAARVTSARMVSPAGRKVDM- 82
Query: 129 QTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
P + Y+GMV R+V D +LR RA + G + G F + L + + + Y D
Sbjct: 83 ----PIDGGYVGMVDRDVFDEWLRARAVQVGTERVTGDFER--LHHDEDGQVTVDYRVTD 136
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGDYDYAIAFQERVKIPDEKMVYYEN 244
+ G R + AVIGADGA SRVA+ A D A+ E V+ P +
Sbjct: 137 --EAGAESLRQVRARAVIGADGARSRVARQCVPCAADMVSVNAYHEIVRTPSGSADFSPT 194
Query: 245 LAEMYVGDDVSPDFYGWVFPKCDHVAVGTGT----VTHKGDIKKFQLATRNRAKDKILGG 300
++Y +SPDFY W+FP + +++G GT V+ +G + R + +
Sbjct: 195 RCDVYYQGRLSPDFYAWIFPHGETISIGVGTAKSGVSLRGAVDAL------RQETGLAEA 248
Query: 301 KIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGS 359
+ +R E P+P P R GR V L GDAAG V SGEGIY+A G+M AEA
Sbjct: 249 ETLRREGAPLPLRPLKRWDDGRNVVLAGDAAGVVAPASGEGIYYAMVGGQMAAEAASAFC 308
Query: 360 ENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMT 419
E+G D L + K+ K + ++VL V+++ +Y S+ RE FV +C D +Q++T
Sbjct: 309 ESG----DARALAQARAKFMKAHGRVFQVLAVMERFWYSSDKRRERFVSLCRDPDIQQIT 364
Query: 420 FDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
+D+Y+ KR+ P +++ + L+
Sbjct: 365 WDAYMNKRLARAKPGAHIRIFFKDLAHLL 393
>gi|395491941|ref|ZP_10423520.1| geranylgeranyl reductase [Sphingomonas sp. PAMC 26617]
Length = 394
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 206/397 (51%), Gaps = 21/397 (5%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTK 114
V+GGGP+G AA LA+ G L++R KPCGGAIP + +F +P ++ K T
Sbjct: 9 VVGGGPSGATAATDLARAGHSVLLLDRS-GRIKPCGGAIPPRAIADFAIPDHLLVGKATM 67
Query: 115 MKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNF 174
+M++PS AVD+ ++G+V RE D +LR RA GA G F +++ R+
Sbjct: 68 ARMVAPSAKAVDMPVG---DGFVGLVDRETFDEWLRARAALAGAERRTGTFERIE--RDA 122
Query: 175 EQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS--INAGDYDYAIAFQERV 232
V+ Y G G ++ + AVIGADGA S VA+S A Y A+ E +
Sbjct: 123 AGTAVVVYRSDRG-----GPEQRVTARAVIGADGARSGVARSELKGADKMRYVFAYHEII 177
Query: 233 KIPDEKMVYYENL-AEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRN 291
P E ++ +++ SPDFY WVFP D ++G G+ KG + +A
Sbjct: 178 ASPPEGGADFDRARCDVFYQGKHSPDFYAWVFPHGDTASIGVGS-ARKGLALRDSVAAL- 235
Query: 292 RAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRM 350
RA+ + G IR E PIP P R +GR V + GDAAG V SGEGIY+A GR
Sbjct: 236 RAQTGLDGCATIRREGAPIPLKPLKRWDNGRDVVVAGDAAGVVAPASGEGIYYAMTGGRH 295
Query: 351 CAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMC 410
AEA+ G +++L + +W +L ++Q +Y S+ RE FV++C
Sbjct: 296 AAEAVAAFLVTGKASALGLARKRFLRAHGRVFW----ILGIMQYFWYSSDKRRERFVKIC 351
Query: 411 ADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSL 447
D VQ++T+D+Y+ KR+V P+ +++ + + L
Sbjct: 352 EDPDVQRLTWDAYMNKRLVRAKPIAHVRIFLKDLRHL 388
>gi|365884815|ref|ZP_09423843.1| geranylgeranyl reductase [Bradyrhizobium sp. ORS 375]
gi|365286601|emb|CCD96374.1| geranylgeranyl reductase [Bradyrhizobium sp. ORS 375]
Length = 403
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 131/391 (33%), Positives = 207/391 (52%), Gaps = 32/391 (8%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LA+ G L++R KPCGGAIP ++ EF++P ++ +++ +M+SPSN VD+
Sbjct: 28 LARQGHHVLLLDRA-GRIKPCGGAIPPRLINEFEIPDHLLVARISAARMVSPSNRDVDM- 85
Query: 129 QTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYY-TEY 185
P + ++GMV RE D +LR+RA GA G F +L R+ + V++Y T
Sbjct: 86 ----PIDGGFVGMVDREHYDEWLRKRAADGGAIRRTGSF--NELTRDDDGIAVVHYETRM 139
Query: 186 DGTKGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGDYDYAIAFQERVKIPDEKMVYYE 243
D G + ++ AVIGADGA S VA+ A + Y A+ E ++ PD ++
Sbjct: 140 D---DGSVRQASVRARAVIGADGAVSAVARQCIPQASEIRYVFAYHEIIRSPDRSHPLFD 196
Query: 244 -NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV----THKGDIKKFQLATRNRAKDKIL 298
++ +SPDFY WVFP ++GTG+ + +G + +F+ A A D +
Sbjct: 197 ATRCDVVYRGQLSPDFYSWVFPHGPTTSIGTGSAHKGFSLRGSVAQFRKAA---ALDDL- 252
Query: 299 GGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIE 357
+ IR E PIP P R +GR V L GDAAG V SGEGIY+A GR A+A+
Sbjct: 253 --ETIRREGAPIPLKPLSRWDNGRDVVLAGDAAGVVAPASGEGIYYAMAGGRAAADAVAL 310
Query: 358 GSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQK 417
+ G D L + + + + + +L ++Q+ +Y ++ RE FV +C D+ VQ+
Sbjct: 311 FLKTG----DAKALATARKTFMRKHGAVFFILGMMQRYWYTNDARRERFVAICRDKDVQQ 366
Query: 418 MTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
+T+D+Y+ K +V PL +++ I L
Sbjct: 367 LTWDAYMNKELVKAKPLSHVRIFFKNIAHLT 397
>gi|312113781|ref|YP_004011377.1| geranylgeranyl reductase [Rhodomicrobium vannielii ATCC 17100]
gi|311218910|gb|ADP70278.1| geranylgeranyl reductase [Rhodomicrobium vannielii ATCC 17100]
Length = 397
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 131/386 (33%), Positives = 200/386 (51%), Gaps = 24/386 (6%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LA+ G L++R KPCGGAIP + +F +P + + ++T +M++PS VD+
Sbjct: 25 LARMGHHVLLLDRG-HRIKPCGGAIPPRAIKDFAIPGECLVARITSARMVAPSGKEVDM- 82
Query: 129 QTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
P + ++GMV R D +LR RA +GA G F K R+ + V+ Y D
Sbjct: 83 ----PIDGGFVGMVDRATFDEWLRNRAADSGAERRKGKFEK--YWRDEKGRAVITYKTAD 136
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGDYDYAIAFQERVKIPDEKMVYYE- 243
G V K AVIGADGANS VAK + A+ E VK P + Y+
Sbjct: 137 GEHVSVAAK------AVIGADGANSEVAKQALPDVKKVPLVYAYHEIVKTPVGGLTNYDP 190
Query: 244 NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKII 303
++Y +SPDFY W+FP D V++GTGT+ D+++ R + +
Sbjct: 191 TRCDVYYQGKLSPDFYAWIFPHGDTVSIGTGTMIKGFDMRQAVADLRKHVGLDEEHAETL 250
Query: 304 RVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENG 362
R E PIP P R +GR V L GDA+G V SGEGIY+A GR+ AEA E +
Sbjct: 251 RWEGSPIPLKPLKRWDNGRDVVLAGDASGVVAPASGEGIYYALLGGRLAAEAAAEFLKTA 310
Query: 363 TRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDS 422
++++++ K +W VL+++Q +YR++ RE FV +C D+ VQ++T+ S
Sbjct: 311 DARALATARKRFMKEHGKVFW----VLELMQHFWYRNDKRRERFVNICQDKDVQRLTWQS 366
Query: 423 YLYKRVVPGNPLEDLKLAVNTIGSLV 448
Y++K +V NP+ ++ + L+
Sbjct: 367 YMHKELVRSNPVAHARIFFKDLAHLL 392
>gi|148257655|ref|YP_001242240.1| geranylgeranyl reductase [Bradyrhizobium sp. BTAi1]
gi|146409828|gb|ABQ38334.1| geranylgeranyl reductase [Bradyrhizobium sp. BTAi1]
Length = 403
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/390 (33%), Positives = 204/390 (52%), Gaps = 30/390 (7%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LA+ G L++R KPCGGAIP ++ EF++P ++ +++ +M+SPSN VD+
Sbjct: 28 LARQGHHVLLLDRA-GRIKPCGGAIPPRLIAEFEIPDHLLVARISSARMVSPSNRDVDM- 85
Query: 129 QTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
P + ++GMV RE D +LR+RA + GA G F + L + V++Y E
Sbjct: 86 ----PIDGGFVGMVDREHYDEWLRQRAAEGGAVRRTGTFNR--LASETDGTAVMHY-ERR 138
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGDYDYAIAFQERVKIPDEKM-VYYE 243
G V E ++ AVIGADGA S VA+ + Y A+ E ++ PD V+
Sbjct: 139 MDDGSVRED-SVRARAVIGADGAVSAVARQCIPEVREIRYVFAYHEIIRSPDRSHPVFDA 197
Query: 244 NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV----THKGDIKKFQLATRNRAKDKILG 299
++ +SPDFY WVFP ++GTG+ + +G + +F+ A A D +
Sbjct: 198 TRCDVVYRGKLSPDFYSWVFPHGPTTSIGTGSACKGFSLRGSVAEFRKAA---ALDDL-- 252
Query: 300 GKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEG 358
+ IR E PIP P R +GR V L GDAAG V SGEGIY+A GR A+A+
Sbjct: 253 -ETIRREGAPIPLKPLSRWDNGRDVVLAGDAAGVVAPASGEGIYYAMAGGRAAAQAVALF 311
Query: 359 SENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKM 418
+ G D L + + + + + +L ++Q+ +Y ++ RE FV +C D VQ++
Sbjct: 312 LKTG----DAAALATARKTFMRKHGAVFFILGMMQRYWYTNDARRERFVAICRDRDVQQL 367
Query: 419 TFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
T+D+Y+ K +V PL +++ I L
Sbjct: 368 TWDAYMNKELVRAKPLSHVRIFFKNIAHLT 397
>gi|404254630|ref|ZP_10958598.1| geranylgeranyl reductase [Sphingomonas sp. PAMC 26621]
Length = 394
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 207/397 (52%), Gaps = 21/397 (5%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTK 114
V+GGGP+G AA LA+ G + L++R KPCGGAIP + +F +P ++ K T
Sbjct: 9 VVGGGPSGATAATDLARAGHKVLLLDRA-GRIKPCGGAIPPRAIADFAIPDHLLVGKATM 67
Query: 115 MKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNF 174
+M++PS AVD+ ++G+V RE D +LR RA GA G F +++ R+
Sbjct: 68 ARMVAPSAKAVDMPVG---DGFVGLVDRETFDEWLRARAALAGAERRTGTFERIE--RDA 122
Query: 175 EQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS--INAGDYDYAIAFQERV 232
V+ Y G G ++ + AVIGADGA S VA+S A Y A+ E +
Sbjct: 123 AGTAVVVYRCDRG-----GPEQRVTARAVIGADGARSGVARSELKGAEKMRYVFAYHEII 177
Query: 233 KIPDEKMVYYENL-AEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRN 291
P E ++ +++ SPDFY WVFP D ++G G+ KG + +A
Sbjct: 178 ASPPEGGADFDRARCDVFYQGKHSPDFYAWVFPHGDTASIGVGS-ARKGLALRDSVAAL- 235
Query: 292 RAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRM 350
RA+ + G IR E PIP P R +GR V + GDAAG V SGEGIY+A GR
Sbjct: 236 RAQTGLDGCATIRREGAPIPLKPLKRWDNGRDVVVAGDAAGVVAPASGEGIYYAMTGGRH 295
Query: 351 CAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMC 410
AEA+ G +++L + +W +L ++Q +Y S+ RE FV++C
Sbjct: 296 AAEAVAAFLVTGKASALGLARKRFLRAHGRVFW----ILGIMQYFWYSSDKRRERFVKIC 351
Query: 411 ADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSL 447
D VQ++T+D+Y+ KR+V P+ +++ + + L
Sbjct: 352 EDPDVQRLTWDAYMNKRLVRAKPIAHVRIFLKDLRHL 388
>gi|188584549|ref|YP_001927994.1| geranylgeranyl reductase [Methylobacterium populi BJ001]
gi|179348047|gb|ACB83459.1| geranylgeranyl reductase [Methylobacterium populi BJ001]
Length = 397
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 200/384 (52%), Gaps = 27/384 (7%)
Query: 72 NGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVD--IGQ 129
+G L++ K KPCGGAIP ++ +F +P ++ ++ +M++PS VD +G
Sbjct: 31 SGHRVLLLD-KAGRIKPCGGAIPPRLIRDFAIPDSLLVARIRSARMVAPSARHVDMPVGD 89
Query: 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTK 189
++GMV RE D YLRERA GA + +GLF + + R+ ++Y +
Sbjct: 90 G-----FVGMVDREHFDPYLRERAALAGADLRDGLFER--ITRDHAGLATVHYRQ----- 137
Query: 190 GGVGEKRTLEVDAVIGADGANSRVAKSINAGD--YDYAIAFQERVKIPDEKMVYYENLAE 247
G GE R ++ VIGADGA S V ++ G A+ E V+ P E + +
Sbjct: 138 GKAGEARQVQTRLVIGADGATSAVGRAEIPGHARMRQVFAYHEIVRRP-EGPQHDGARCD 196
Query: 248 MYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRN-RAKDKILGGKIIRVE 306
+Y +SPDFY W+FP + V++GTG+ +++ A R+ RA + + IR E
Sbjct: 197 VYYQGRLSPDFYAWIFPHGETVSIGTGSARKGFSLRR---AIRDLRAGTGLEACETIRRE 253
Query: 307 AHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRM 365
P+P P R +GR V L GDAAG V SGEGIY+A GR+ AEA G
Sbjct: 254 GAPLPLKPLRRWDNGRDVLLAGDAAGVVAPASGEGIYYAMLGGRLAAEAAGAFLVAGDAR 313
Query: 366 IDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLY 425
G +K++ + +W +L ++Q V+YRS+ RE FV +C D+ VQ++T+D+Y+
Sbjct: 314 ALAGARKKFMRLHGRVFW----ILGMMQWVWYRSDGLRERFVAICKDKDVQQLTWDAYMN 369
Query: 426 KRVVPGNPLEDLKLAVNTIGSLVR 449
K +V P ++ + L R
Sbjct: 370 KELVRAKPAAHARIFFKDLAHLFR 393
>gi|365888751|ref|ZP_09427492.1| geranylgeranyl reductase [Bradyrhizobium sp. STM 3809]
gi|365335565|emb|CCE00023.1| geranylgeranyl reductase [Bradyrhizobium sp. STM 3809]
Length = 401
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 205/390 (52%), Gaps = 30/390 (7%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LA+ G L++ K KPCGGAIP ++ EF++P ++ +++ +M+SPSN VD+
Sbjct: 26 LARQGHRVLLLD-KAGRIKPCGGAIPPRLINEFEIPDHLLVARISSARMVSPSNRDVDM- 83
Query: 129 QTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
P + ++GMV RE D +LR RA GA G F + R+ + +++Y E
Sbjct: 84 ----PIDGGFVGMVDREHYDEWLRARAATGGAVRRTGTFSH--ISRDQDDTALVHY-ERR 136
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGDYDYAIAFQERVKIPDEKMVYYE- 243
G + E ++ AVIGADGA S VA+ A + Y A+ E ++ PD ++
Sbjct: 137 MDDGSLHED-SVRARAVIGADGAVSAVARQCIPEASEIRYVFAYHEIIRSPDRSHPLFDA 195
Query: 244 NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV----THKGDIKKFQLATRNRAKDKILG 299
++ +SPDFY WVFP ++GTG+ + +G + +F+ A A D +
Sbjct: 196 TRCDVVYRGQLSPDFYSWVFPHGPTTSIGTGSAHKGFSLRGSVAQFRKAA---ALDDL-- 250
Query: 300 GKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEG 358
+ IR E PIP P R +GR V L GDAAG V SGEGIY+A GR A+A+
Sbjct: 251 -ETIRREGAPIPLKPLSRWDNGRDVVLAGDAAGVVAPASGEGIYYAMAGGRAAADAVALF 309
Query: 359 SENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKM 418
+ G D L + + + + + +L ++Q+ +Y ++ RE FV +C D+ VQ++
Sbjct: 310 LKTG----DAKALSTARKAFMRKHGAVFFILGMMQRYWYTNDARRERFVAICRDKDVQQL 365
Query: 419 TFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
T+D+Y+ K +V PL +++ I L
Sbjct: 366 TWDAYMNKELVRAKPLSHVRIFFKNIAHLT 395
>gi|88706639|ref|ZP_01104342.1| geranylgeranyl hydrogenase [Congregibacter litoralis KT71]
gi|88699135|gb|EAQ96251.1| geranylgeranyl hydrogenase [Congregibacter litoralis KT71]
Length = 404
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 137/390 (35%), Positives = 198/390 (50%), Gaps = 31/390 (7%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVD-- 126
L+K+G + LIER KPCGGAIP V +F++P + I ++ +MISP++ VD
Sbjct: 31 LSKSGKKVLLIERGF-RIKPCGGAIPPRAVEQFNIPAEQIVARIRSARMISPADQRVDMP 89
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
+G T Y+ MV R+ D +LRERA + GA++ G + + F Q Y
Sbjct: 90 VGDT-----YVAMVDRDKFDPFLRERAVEAGATLQIGAYKSL-----FYQDDGRVRLRYL 139
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRV-AKSINAGD-YDYAIAFQERVK--IPDEKMVYY 242
G GE + AVIGADGA SRV A+ I GD A+ E V+ P++ Y
Sbjct: 140 DKSGSGGEHEVI-ARAVIGADGAKSRVGAQCIPGGDKLKCVFAYHEIVEAPTPEQGADYQ 198
Query: 243 ENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILG--- 299
E +++ +SPDFY WVFP H ++GTG+ K + K +G
Sbjct: 199 ETRCDVWYQGRLSPDFYAWVFPHGKHASIGTGSAQ-----KNYSATAAVEMLRKDVGLDT 253
Query: 300 GKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEG 358
K +R E PIP P R GR V L GD+AG V SGEGIY+A GR+ A+A+
Sbjct: 254 AKTVRREGAPIPMKPLKRWDDGRAVLLAGDSAGVVAPASGEGIYYALLGGRLAADAV--- 310
Query: 359 SENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKM 418
E D L+ +++ K + + VL +LQ+ +Y S+ RE FV+MC D +Q +
Sbjct: 311 -EAFLLSHDPAALKTARKRFMKLHGKVFFVLGLLQRFWYGSDKRREKFVKMCRDPDIQYL 369
Query: 419 TFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
T+ SY K +V P +K+ + L+
Sbjct: 370 TWQSYTQKELVRERPTAHVKIFFKDLAELL 399
>gi|50592003|gb|AAT78843.1| geranylgeranyl bacteriochlorophyll reductase [Bradyrhizobium sp.
ORS 278]
Length = 401
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 131/389 (33%), Positives = 202/389 (51%), Gaps = 28/389 (7%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LA+ G L++ K KPCGGAIP ++ EF++P ++ +++ +M+SPSN VD+
Sbjct: 26 LARQGHHVLLLD-KAGRIKPCGGAIPPRLISEFEIPDHLLVARISSARMVSPSNRDVDM- 83
Query: 129 QTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
P + ++GMV RE D +LR RA + GA + G F + R+ + V++Y E
Sbjct: 84 ----PIDGGFVGMVDREHYDEWLRARAAEGGAVLRTGTFSH--IARDADGTAVVHY-ERR 136
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGDYDYAIAFQERVKIPDEKMVYYE- 243
G V E ++ AVIGADGA S VA+ + Y A+ E V+ P+ ++
Sbjct: 137 MDDGSVRED-SVRARAVIGADGAVSAVARQCIPEGAEIRYVFAYHEIVRSPERGHPLFDA 195
Query: 244 NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILG---G 300
++ +SPDFY WVFP ++GTG+ HKG F L K+ G
Sbjct: 196 TRCDVVYRGQLSPDFYSWVFPHGATTSIGTGS-AHKG----FSLRGSVAQFRKVAGLDDL 250
Query: 301 KIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGS 359
+ IR E PIP P R +GR V L GDAAG V SGEGIY+A GR A+A+
Sbjct: 251 ETIRREGAPIPLRPLSRWDNGRDVVLAGDAAGVVAPASGEGIYYAMAGGRAAADAVALFL 310
Query: 360 ENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMT 419
+ G + ++ K ++ +L ++Q+ +Y ++ RE FV +C D+ VQ++T
Sbjct: 311 KTGDAAALATARKAFMRKHGAVFF----ILGMMQRYWYTNDARRERFVAICRDKDVQQLT 366
Query: 420 FDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
+D+Y+ K +V PL +++ I L
Sbjct: 367 WDAYMNKELVKAKPLSHVRIFFKNIAHLT 395
>gi|427426831|ref|ZP_18916877.1| Geranylgeranyl diphosphate reductase [Caenispirillum salinarum AK4]
gi|425884195|gb|EKV32869.1| Geranylgeranyl diphosphate reductase [Caenispirillum salinarum AK4]
Length = 397
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/378 (32%), Positives = 189/378 (50%), Gaps = 20/378 (5%)
Query: 73 GVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLK 132
G L++R KPCGGA+P ++ EF +P ++ +V ++I+PS VD+ +
Sbjct: 31 GRSVLLLDRA-GRPKPCGGAVPPRLLREFAVPESVLCTRVRGARVIAPSGRQVDM--PIA 87
Query: 133 PHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGV 192
++GMV RE D +LR RA GA G +D R+ + + +
Sbjct: 88 DGGFVGMVNRETFDEWLRARAATLGARRRTGTLAGLD--RDADGAVRITLRDK------A 139
Query: 193 GEKRTLEVDAVIGADGANSRVAKSINAGDYD--YAIAFQERVKIPDEKMVYYENLAEMYV 250
GE ++ VIGADGA S VA+ D IA+ E ++ P+ Y ++
Sbjct: 140 GEGASIRARMVIGADGARSAVARLAMPDDPPPPSVIAYHEIIRAPEPGGAYDPLRCDVLY 199
Query: 251 GDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPI 310
+VSPDFYGWVFP + ++G GT +++ R RA + + +R E PI
Sbjct: 200 QGNVSPDFYGWVFPHGETASIGMGTAQDGFPLREATALLRKRAG--LADAETLRTEGAPI 257
Query: 311 PEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEG 369
P PR R +GR V L GDAAG V SGEGIY+A SGRM AEA+ + G
Sbjct: 258 PLKPRRRWDNGRDVVLCGDAAGTVAPASGEGIYYAMASGRMAAEAVAVALDTGDARALAT 317
Query: 370 DLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVV 429
+++L+ + +W +L ++Q+ +Y S+ RE FV +C D VQ +T+ SY+ K +
Sbjct: 318 ARKRFLKAHGRVFW----ILGLMQRFWYSSDARRERFVSICRDPDVQALTWQSYMNKELT 373
Query: 430 PGNPLEDLKLAVNTIGSL 447
+P +++ + L
Sbjct: 374 RRDPAAHMRIFFKDLAHL 391
>gi|146338700|ref|YP_001203748.1| geranylgeranyl reductase [Bradyrhizobium sp. ORS 278]
gi|146191506|emb|CAL75511.1| geranylgeranyl reductase [Bradyrhizobium sp. ORS 278]
Length = 401
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/389 (33%), Positives = 201/389 (51%), Gaps = 28/389 (7%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LA+ G L++ K KPCGGAIP ++ EF++P ++ +++ +M+SPSN VD+
Sbjct: 26 LARQGHHVLLLD-KAGRIKPCGGAIPPRLISEFEIPDHLLVARISSARMVSPSNRDVDM- 83
Query: 129 QTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
P + ++GMV RE D +LR RA + GA G F + R+ + V++Y E
Sbjct: 84 ----PIDGGFVGMVDREHYDEWLRARAAEGGAVRRTGTFSH--IARDADGTAVVHY-ERR 136
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGDYDYAIAFQERVKIPDEKMVYYE- 243
G V E ++ AVIGADGA S VA+ + Y A+ E V+ P+ ++
Sbjct: 137 MDDGSVRED-SVRARAVIGADGAVSAVARQCIPEGAEIRYVFAYHEIVRSPERGHPLFDA 195
Query: 244 NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILG---G 300
++ +SPDFY WVFP ++GTG+ HKG F L K+ G
Sbjct: 196 TRCDVVYRGQLSPDFYSWVFPHGATTSIGTGS-AHKG----FSLRGSVAQFRKVAGLDDL 250
Query: 301 KIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGS 359
+ IR E PIP P R +GR V L GDAAG V SGEGIY+A GR A+A+
Sbjct: 251 ETIRREGAPIPLRPLSRWDNGRDVVLAGDAAGVVAPASGEGIYYAMAGGRAAADAVALFL 310
Query: 360 ENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMT 419
+ G + ++ K ++ +L ++Q+ +Y ++ RE FV +C D+ VQ++T
Sbjct: 311 KTGDAAALATARKAFMRKHGAVFF----ILGMMQRYWYTNDARRERFVAICRDKDVQQLT 366
Query: 420 FDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
+D+Y+ K +V PL +++ I L
Sbjct: 367 WDAYMNKELVKAKPLSHVRIFFKNIAHLT 395
>gi|408376772|ref|ZP_11174376.1| geranylgeranyl reductase [Agrobacterium albertimagni AOL15]
gi|407749462|gb|EKF60974.1| geranylgeranyl reductase [Agrobacterium albertimagni AOL15]
Length = 401
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/396 (34%), Positives = 206/396 (52%), Gaps = 24/396 (6%)
Query: 60 PAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMIS 119
P G AAE L + G LI+ + KPCGGAIP + +F +P + + ++I+
Sbjct: 14 PCGAMAAERLVEKGHSVLLIDPD-NRIKPCGGAIPSRALADFAIPEAQLVARANAARIIA 72
Query: 120 PSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYV 179
PS VD+ T+ Y+GMV R D YLR+RA GA + G +M +
Sbjct: 73 PSGRTVDM--TIGDIGYVGMVDRAAFDPYLRQRAADAGAERLCGKLDEM----TEGDGGL 126
Query: 180 LYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYD--YAIAFQERVKIPD- 236
L T KG E + VIGADGANS V + + Y A+ E V+ P
Sbjct: 127 LELTVEPTAKGAGQEPIQIRARRVIGADGANSAVRRLMFPASRKPPYVFAYHEIVESPAG 186
Query: 237 -EKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKD 295
++ V+ + ++ +SPDFYGWVFP ++GTGT +I++ ATR
Sbjct: 187 ADEAVFKADRCDVVYDGRISPDFYGWVFPHGGQTSIGTGTAVKGHNIRE---ATRALKLA 243
Query: 296 KILGG-KIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAE 353
LG ++IR E P+P P R +GR V L GDAAG V SGEGIY+A GR+ A+
Sbjct: 244 AGLGDCRVIRREGAPLPLKPMKRWDNGRNVLLAGDAAGTVAPSSGEGIYYAMLCGRLSAD 303
Query: 354 AIIEG--SENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCA 411
A+ + S++G + + R ++ + + + +L ++Q ++YR++ RE FV MCA
Sbjct: 304 AVHQSLLSDSGRALAEA--RRTFM----RAHGRVFLILGIMQTIWYRNDRLREKFVAMCA 357
Query: 412 DEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSL 447
D VQ++T++SYL K++V +PL +++ + L
Sbjct: 358 DPDVQRLTWESYLNKKLVRRDPLAHVRVFFKDLAKL 393
>gi|381160158|ref|ZP_09869390.1| geranylgeranyl reductase family protein [Thiorhodovibrio sp. 970]
gi|380878222|gb|EIC20314.1| geranylgeranyl reductase family protein [Thiorhodovibrio sp. 970]
Length = 414
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 205/389 (52%), Gaps = 24/389 (6%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LA+ G L++R KPCGGAIP + EF++P + + K+ +M++PS VD+
Sbjct: 25 LARRGRSVLLLDRP-GRIKPCGGAIPPIAISEFEIPDEQLVAKINSARMVAPSERHVDMP 83
Query: 129 QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYT-EYDG 187
Y+GMV R D +LRERA GA+ NG + ++D R+ + ++++ E G
Sbjct: 84 IN---GGYVGMVDRAPFDEWLRERAAAAGATRRNGSYQRID--RDSDGTAIVHFQPEEAG 138
Query: 188 TKGGVGEK-RTLEVDAVIGADGANSRVAKSINAG--DYDYAIAFQERVKIPDEKMVYYE- 243
+K + A+IGADGA SRVAK G + + A+ E V+ PD ++
Sbjct: 139 SKAEAKPAPEQVRARAIIGADGAMSRVAKDCVPGAKELPHVAAYHEIVRSPDANHGDFDP 198
Query: 244 NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILG---G 300
++Y +SPDFYGWVFP + +VG GT ++K F L K G
Sbjct: 199 TRCDVYYQGKISPDFYGWVFPHGETTSVGVGT-----ELKGFSLKQATADLRKAAGLEDC 253
Query: 301 KIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGS 359
+ +R E PIP HP + + R + L GDAAG V SGEGIY+A GR+ A+A+ +
Sbjct: 254 ETLRCEGAPIPLHPLKKWDNDRDLVLAGDAAGVVAPASGEGIYYALTGGRLAADAVEQFL 313
Query: 360 ENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMT 419
G +++++ + +W +L ++Q+ +Y+S+ RE FV +C D +Q +T
Sbjct: 314 ITGDAKALAQARKRFMKAHGRVFW----ILGIMQRFWYKSDKRRERFVSLCDDPDIQHLT 369
Query: 420 FDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
+++Y++KR+V P L++ + L+
Sbjct: 370 WEAYMHKRLVRAKPAAHLRIFLKDTAHLL 398
>gi|254513789|ref|ZP_05125850.1| geranylgeranyl reductase [gamma proteobacterium NOR5-3]
gi|219676032|gb|EED32397.1| geranylgeranyl reductase [gamma proteobacterium NOR5-3]
Length = 405
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 140/392 (35%), Positives = 198/392 (50%), Gaps = 35/392 (8%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVD-- 126
L + G + LIER KPCGGAIP V +F++P + I K+ +MISP++ VD
Sbjct: 32 LTRAGRKVLLIERGF-RIKPCGGAIPPRAVDQFNIPPEQIVAKIRSARMISPADQRVDMP 90
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
+G T Y+ MV R+ D +LRERA GA++ G + L + L Y +
Sbjct: 91 VGDT-----YVAMVDRDKFDPFLRERAVTAGATLQIGAYKS--LVYQDDGRIRLRYLD-- 141
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRV-AKSINAGD-YDYAIAFQERVKIP--DEKMVYY 242
K G G + + AVIGADGA SRV A+ I GD A+ E V+ P D+ Y
Sbjct: 142 --KSGSGGEHEVIASAVIGADGAKSRVGAQCIPGGDKLKCVFAYHEIVEAPTQDQGADYE 199
Query: 243 ENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILG--- 299
E +++ +SPDFY WVFP H ++GTG+ K + A K +G
Sbjct: 200 ETRCDVWYQGRLSPDFYAWVFPHGKHASIGTGSAQ-----KNYSATAAVEALRKDVGLDT 254
Query: 300 GKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEG 358
K +R E PIP P R GR V L GD+AG V SGEGIY+A G + AEAI E
Sbjct: 255 AKTVRREGAPIPMKPLKRWDDGRAVLLAGDSAGVVAPASGEGIYYALLGGSLAAEAINEF 314
Query: 359 --SENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQ 416
S N L+ +++ K + + VL +LQ+ +Y S+ RE FV+MC D +Q
Sbjct: 315 LVSRN------PAALKTARKRFMKLHGKVFFVLGLLQRFWYGSDKRREKFVKMCRDPDIQ 368
Query: 417 KMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
+T+ +Y K +V P +K+ + L+
Sbjct: 369 YLTWQAYTQKELVRERPTAHVKIFFKDLAELL 400
>gi|163760464|ref|ZP_02167546.1| geranylgeranyl reductase [Hoeflea phototrophica DFL-43]
gi|162282415|gb|EDQ32704.1| geranylgeranyl reductase [Hoeflea phototrophica DFL-43]
Length = 412
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 128/391 (32%), Positives = 197/391 (50%), Gaps = 21/391 (5%)
Query: 67 ETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVD 126
E LA +G T L++++ KPCGGAIP + ++ + + I +V +M PS + V
Sbjct: 37 ERLAASGRSTLLVDKE-GRTKPCGGAIPSNAMAQYAIAPEQIKARVRGARMTGPSGIQV- 94
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
G + ++GMV R+ D YLRERA GA F ++ + L
Sbjct: 95 -GMEIGEVGHVGMVDRDQFDPYLRERARLAGADYRAASFSSLEQRADGMVDVTL------ 147
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDY--DYAIAFQERVK--IPDEKMVYY 242
K + T+ VIGADGANS V ++I Y A+ E V+ P +
Sbjct: 148 -GKSKDRDAETISASVVIGADGANSAVRRAIFGPKVRPPYVFAYHEIVRSPAPGTNKDFD 206
Query: 243 ENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKI 302
E+ ++SPDFYGWVFP + +VG G+ D+K R R + +
Sbjct: 207 PTQCEVIYDGEISPDFYGWVFPHGPYTSVGCGSAVKGFDLKAATHELRERFG--LADAET 264
Query: 303 IRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSEN 361
+R E P+P P R GR V L+GDAAG V SGEGI++A +G + AEA I+ E
Sbjct: 265 VREEGAPLPLKPMKRWDDGRNVLLIGDAAGVVAPSSGEGIWYAMHTGDLGAEAAIKVLET 324
Query: 362 GTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFD 421
G + L +++ K + + VL +Q +Y S+ RE FV+MCAD+ VQ++T++
Sbjct: 325 G----NAKHLASARKRFQKAHGKVFLVLGFMQWFWYSSDKRREKFVKMCADKDVQRLTWE 380
Query: 422 SYLYKRVVPGNPLEDLKLAVNTIGSLVRANA 452
SYL K++V +P+ +++ + + L+R A
Sbjct: 381 SYLNKKLVRKDPMAHVRVFLKDMRQLLRPAA 411
>gi|85710607|ref|ZP_01041671.1| geranylgeranyl reductase [Erythrobacter sp. NAP1]
gi|85687785|gb|EAQ27790.1| geranylgeranyl reductase [Erythrobacter sp. NAP1]
Length = 402
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 131/393 (33%), Positives = 199/393 (50%), Gaps = 34/393 (8%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVD-- 126
LA G L+ER KPCGGAIP + +FD+P ++ + +MI+PS AVD
Sbjct: 24 LALAGHSVLLMERG-GRIKPCGGAIPPRALDDFDIPQSLLVARARSARMIAPSGRAVDMP 82
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
+G+ Y+GMV RE D +LRERA +G + F K++ + P V + E
Sbjct: 83 VGEI----GYVGMVDREEFDEWLRERARMSGVERLTATFDKVERDEH-AHPIVTFRRE-- 135
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGDYDYAIAFQERVKIPDEKMV---- 240
+GG EK + +IGADGA S VAK +A A+ E +K P M+
Sbjct: 136 --RGGPIEK--VRARCIIGADGARSSVAKQCLPDAERVKCVFAYHEIIKSPQMGMIANDD 191
Query: 241 -YYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQL---ATRNRAKDK 296
Y + +++ +SPDFY WVFP D ++G G+ K F L + R++
Sbjct: 192 AYDPDRCDVFYQGKLSPDFYAWVFPHGDTASIGVGSAN-----KGFSLRGAVSEMRSELD 246
Query: 297 ILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
+ + IR E PIP P R +G V + GDAAG V SGEGIY+A GR AEA
Sbjct: 247 LTRCETIRREGAPIPLKPLKRWDNGADVIVAGDAAGIVAPASGEGIYYAMVGGRYSAEAA 306
Query: 356 IEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYV 415
+ G + +++++ + +W +L ++Q +Y S+ RE FV+MC D+ V
Sbjct: 307 SQMLLTGEAKALKTARKRFMKDHGRVFW----ILGIMQYFWYSSDKRRERFVDMCDDKDV 362
Query: 416 QKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
Q +T+ +Y+ K++V PL +K+ + L+
Sbjct: 363 QHLTWQAYMNKKLVRKKPLAHVKIFLKDTAHLL 395
>gi|170748272|ref|YP_001754532.1| geranylgeranyl reductase [Methylobacterium radiotolerans JCM 2831]
gi|170654794|gb|ACB23849.1| geranylgeranyl reductase [Methylobacterium radiotolerans JCM 2831]
Length = 408
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/394 (32%), Positives = 202/394 (51%), Gaps = 34/394 (8%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVD-- 126
LA+ G L++ K KPCGGAIP ++ +F +P ++ K+ +M++PS VD
Sbjct: 32 LARAGHAVLLLD-KPGRIKPCGGAIPPRLIRDFAIPDALLVAKIRSARMVAPSGKTVDMP 90
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
+G+ ++GMV RE D +LR RA + GA + F ++ P + P ++++T
Sbjct: 91 VGEG-----FVGMVDREHFDPWLRARAAEAGADLRAAAFERITRPDD--GPPLVHFT--- 140
Query: 187 GTKGGVGEKR-TLEVDAVIGADGANSRVAKSINAGD--YDYAIAFQERVKIPDEKMVYYE 243
T G G R + V+GADGA S V ++ G A+ E +++P+
Sbjct: 141 -TGAGTGLARHAVRARLVVGADGACSPVGRAEVPGHARMRQVFAYHEILRVPEAGAPGAG 199
Query: 244 NL----AEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRA---KDK 296
++ ++Y SPDFY W+FP D +++GTG+ K F L + RA
Sbjct: 200 SVEATRCDVYYQGRHSPDFYSWIFPHGDTLSIGTGSAR-----KGFSLRSSIRALRVATG 254
Query: 297 ILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
+ G + +R E P+P P R +GR V L GDAAG V SGEGIY+A GR+ AEA
Sbjct: 255 LDGAETVRREGAPLPLKPLKRWDNGRDVLLAGDAAGVVAPASGEGIYYAMLGGRLSAEAA 314
Query: 356 IEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYV 415
E G R++++ + +W +L ++Q V+YRS+ RE FV +C D+ V
Sbjct: 315 AAFLETGDARALGRARRRFMKLHGRVFW----ILGMMQWVWYRSDGLRERFVSICRDKDV 370
Query: 416 QKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVR 449
Q++T+DSY+ K +V P ++ + L R
Sbjct: 371 QQLTWDSYMNKELVRAKPAAHARIFFKDLAHLFR 404
>gi|456357437|dbj|BAM91882.1| geranylgeranyl reductase [Agromonas oligotrophica S58]
Length = 403
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 201/389 (51%), Gaps = 30/389 (7%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LA+ G L++R KPCGGAIP ++ EF++P ++ +++ +M+SPSN VD+
Sbjct: 28 LARRGHHVLLLDRA-GRIKPCGGAIPPRLIAEFEIPGHLLVARISAARMVSPSNKDVDM- 85
Query: 129 QTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
P + ++GMV RE D +LR RA + GA G F L R + V+ Y
Sbjct: 86 ----PIDGGFVGMVDREHFDEWLRTRAVEGGAIRRTGTFSA--LTREADGTAVVSYERR- 138
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGDYDYAIAFQERVKIP-DEKMVYYE 243
G ++ ++ AVIGADGA S VA+ A + Y A+ E ++ P V+
Sbjct: 139 -LDDGRLQQNSVRARAVIGADGAVSAVARRCIPAASEMRYVFAYHEIIRSPAPHHPVFDA 197
Query: 244 NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV----THKGDIKKFQLATRNRAKDKILG 299
++ +SPDFY WVFP ++GTG+ + +G + +F+ A A D +
Sbjct: 198 TRCDVVYRGQLSPDFYSWVFPHGPTTSIGTGSACKGFSLRGSVAEFRKAA---ALDDL-- 252
Query: 300 GKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEG 358
+ IR E PIP P R +GR V L GDA+G V SGEGIY+A GR A+A+
Sbjct: 253 -ETIRREGAPIPLKPLSRWDNGRDVVLAGDASGVVAPASGEGIYYAMAGGRAAADAVALF 311
Query: 359 SENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKM 418
+ G R ++ + ++ +L ++Q+ +Y ++ RE FV +C D+ VQ++
Sbjct: 312 LKTGNAAALASARRSFMRQHGAVFF----ILGLMQRYWYLNDARRERFVAICRDKDVQQL 367
Query: 419 TFDSYLYKRVVPGNPLEDLKLAVNTIGSL 447
T+D+Y+ K +V PL +++ I L
Sbjct: 368 TWDAYMNKALVRAKPLSHVRIFFKNIAHL 396
>gi|367478403|ref|ZP_09477714.1| geranylgeranyl reductase [Bradyrhizobium sp. ORS 285]
gi|365269288|emb|CCD90182.1| geranylgeranyl reductase [Bradyrhizobium sp. ORS 285]
Length = 401
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/388 (32%), Positives = 202/388 (52%), Gaps = 26/388 (6%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LA+ G L++ K KPCGGAIP ++ EF++P ++ +++ +M+SPSN VD+
Sbjct: 26 LARQGHSVLLLD-KAGRIKPCGGAIPPRLINEFEIPDHLLVARISSARMVSPSNRGVDM- 83
Query: 129 QTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
P + ++GMV RE D +LR RA + GA G + + + + V++Y E
Sbjct: 84 ----PIDGGFVGMVDREHYDEWLRNRAAEGGAIRRTGTYSH--IAHDDDGTAVVHY-ERR 136
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGDYDYAIAFQERVKIPDEKMVYYE- 243
G + E + AVIGADGA S VA+ + Y A+ E ++ PD ++
Sbjct: 137 MDDGSLRED-CVRARAVIGADGALSAVARQCIPEVSEMRYVFAYHEIIRSPDRSHPLFDA 195
Query: 244 NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAK--DKILGGK 301
++ +SPDFY WVFP ++GTG+ HKG + +A +A D + +
Sbjct: 196 TRCDVVYRGQLSPDFYSWVFPHGPTTSIGTGS-AHKGFSLRGSVAAFRKAAAFDDL---E 251
Query: 302 IIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
IR E PIP P R +GR V L GDA+G V SGEGIY+A GR A+A+ +
Sbjct: 252 TIRREGAPIPLKPLSRWDNGRDVVLAGDASGVVAPASGEGIYYAMAGGRAAADAVALFLK 311
Query: 361 NGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTF 420
G D L + + + + + +L ++Q+ +Y ++ RE FV +C D+ VQ++T+
Sbjct: 312 TG----DAKALATARKTFMRKHGAVFFILGMMQRYWYTNDARRERFVAICRDKDVQQLTW 367
Query: 421 DSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
D+Y+ K +V PL +++ I L
Sbjct: 368 DAYMNKELVKAKPLSHVRIFFKNIAHLT 395
>gi|402848572|ref|ZP_10896828.1| Geranylgeranyl hydrogenase BchP [Rhodovulum sp. PH10]
gi|402501143|gb|EJW12799.1| Geranylgeranyl hydrogenase BchP [Rhodovulum sp. PH10]
Length = 402
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 201/385 (52%), Gaps = 22/385 (5%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LA+ G L++ K KPCGGAIP + ++D+P ++ K+T +MI+PS V++
Sbjct: 27 LARKGRSVLLLD-KAGRIKPCGGAIPPRAIRDYDIPDHMLVAKITGARMIAPSARQVEM- 84
Query: 129 QTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
P + Y+ MV R D +LR RAE GA+ NG F +++ R+ V++Y
Sbjct: 85 ----PIDGGYVSMVDRGPFDEWLRSRAEAAGATRRNGTFERIE--RDDGGMAVVHYRPR- 137
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGDYDYAIAFQERVKIPDEKMV-YYE 243
T+ + VIGADGA S V + A + A+ E V+ P+ +
Sbjct: 138 -TEKKTDMTVCVRARTVIGADGALSMVGRQAVPGADKVPHVFAYHEIVRAPEPGAADFIA 196
Query: 244 NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKII 303
+ ++Y +SPDFY W+FP V++GTG++ KG + +A R + + +
Sbjct: 197 DRCDVYYQGPLSPDFYAWIFPHGPTVSIGTGSMK-KGFALREAVANLRRTT-GLDQCETL 254
Query: 304 RVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENG 362
R E PIP HP R +GR V L GDAAG V SGEGIY+A GR+ A+AI E G
Sbjct: 255 RHEGAPIPLHPLKRWDNGRDVLLAGDAAGVVAPASGEGIYYALTGGRLAADAIDEVLRTG 314
Query: 363 TRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDS 422
D +L +++ K + + +L +LQ+ +YR++ RE FV MC D VQ++T+ +
Sbjct: 315 ----DARNLGLARKQFMKAHGRVFFILGLLQRFWYRNDWTRERFVAMCRDPDVQRLTWQA 370
Query: 423 YLYKRVVPGNPLEDLKLAVNTIGSL 447
Y+ K +V P +K+ + SL
Sbjct: 371 YMNKELVRAKPAAHVKIFFKDVASL 395
>gi|170525182|gb|ACB20951.1| geranylgeranyl reductase [Solanum trisectum]
Length = 108
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/108 (78%), Positives = 96/108 (88%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF+KMD+P++ PYVL+YT YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKSPNSPYVLHYTSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEK 238
G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER+KI D+K
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIKISDDK 108
>gi|393766185|ref|ZP_10354742.1| geranylgeranyl reductase [Methylobacterium sp. GXF4]
gi|392728558|gb|EIZ85866.1| geranylgeranyl reductase [Methylobacterium sp. GXF4]
Length = 404
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/393 (32%), Positives = 198/393 (50%), Gaps = 32/393 (8%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVD-- 126
LA+ G L++ K KPCGGAIP ++ +F +P ++ K+ +M++PS AVD
Sbjct: 28 LARAGHAVLLLD-KPGRIKPCGGAIPPRLIRDFAIPDSLLVAKIRSARMVAPSGKAVDMP 86
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
+G+ ++GMV R+ D +LR RA++ GA + + K+ P + P V + T
Sbjct: 87 VGEG-----FVGMVDRQHFDPWLRARAQQAGADLREAAYDKITRPDD-GLPLVHFTT--- 137
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGD--YDYAIAFQERVKIPDEKMVYYEN 244
KG + + VIGADGA S V ++ G A+ E V++P +
Sbjct: 138 -GKGEAQARHAIRARLVIGADGACSPVGRAQVPGHDRMKQVFAYHEIVRVPAADAPGGDA 196
Query: 245 L----AEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRA---KDKI 297
+ ++Y SPDFY W+FP + ++GTG+ K F L + RA +
Sbjct: 197 VDAARCDVYYQGRHSPDFYSWIFPHGETASIGTGSAK-----KGFSLRSSIRALRVATGL 251
Query: 298 LGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAII 356
G + IR E P+P P R +GR V L GDAAG V SGEGIY+A G++ AEA
Sbjct: 252 DGAETIRREGAPLPLKPLKRWDNGRDVLLAGDAAGVVAPASGEGIYYAMLGGQLSAEAAK 311
Query: 357 EGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQ 416
G R++++ + +W +L ++Q V+YRS+ RE FV +C D+ VQ
Sbjct: 312 SFLATGDVRALALARRRFMKLHGRVFW----ILGMMQWVWYRSDGLRERFVSICRDKDVQ 367
Query: 417 KMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVR 449
++T+DSY+ K +V P ++ + L R
Sbjct: 368 QLTWDSYMNKELVRAKPAAHARIFFKDLAHLFR 400
>gi|163854218|ref|YP_001642261.1| geranylgeranyl reductase [Methylobacterium extorquens PA1]
gi|163665823|gb|ABY33190.1| geranylgeranyl reductase [Methylobacterium extorquens PA1]
Length = 397
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/386 (33%), Positives = 198/386 (51%), Gaps = 31/386 (8%)
Query: 72 NGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVD--IGQ 129
+G L++ K KPCGGAIP ++ +F +P ++ ++ +M++PS +VD +G
Sbjct: 31 SGRRVLLLD-KAGRIKPCGGAIPPRLIRDFAIPDALLVARIRCARMVAPSARSVDMPVGD 89
Query: 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTK 189
++GMV RE D YLRERA GA + +GLF ++ + L Y K
Sbjct: 90 G-----FVGMVDREHFDPYLRERAALAGADLRDGLFERIS-----RESAGLATVHYRSGK 139
Query: 190 GGVGEKRTLEVDAVIGADGANSRVAKSINAGD--YDYAIAFQERVKIPDEKMVYYENLAE 247
GG E+ ++ VIGADGA S V ++ G A+ E V+ P E + +
Sbjct: 140 GG--EEHRVQARLVIGADGATSTVGRAEIPGHARMRQVFAYHEIVRRPAETG-HDGARCD 196
Query: 248 MYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQL--ATRN-RAKDKILGGKIIR 304
+Y +SPDFY W+FP + V+VGTG+ K F L A R+ RA + + IR
Sbjct: 197 VYYQGRLSPDFYAWIFPHGETVSVGTGSAR-----KGFSLRSAIRDLRADTGLDACETIR 251
Query: 305 VEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGT 363
E P+P P R +GR V L GDAAG V SGEGIY+A GR+ AEA G
Sbjct: 252 REGAPLPLKPLRRWDNGRDVLLAGDAAGVVAPASGEGIYYAMLGGRLAAEAAGAFLATGD 311
Query: 364 RMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSY 423
++++ + +W +L ++Q V+YRS+ RE FV +C D+ VQ++T+D+Y
Sbjct: 312 ARALAQPRKRFMRLHGRVFW----ILGMMQWVWYRSDTLRERFVSICKDKDVQQLTWDAY 367
Query: 424 LYKRVVPGNPLEDLKLAVNTIGSLVR 449
+ K +V P ++ + L R
Sbjct: 368 MNKELVRAKPAAHARIFFKDLAHLFR 393
>gi|240141678|ref|YP_002966158.1| geranylgeranyl reductase [Methylobacterium extorquens AM1]
gi|418061582|ref|ZP_12699432.1| geranylgeranyl reductase [Methylobacterium extorquens DSM 13060]
gi|240011655|gb|ACS42881.1| geranylgeranyl reductase [Methylobacterium extorquens AM1]
gi|373564856|gb|EHP90935.1| geranylgeranyl reductase [Methylobacterium extorquens DSM 13060]
Length = 397
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/386 (33%), Positives = 198/386 (51%), Gaps = 31/386 (8%)
Query: 72 NGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVD--IGQ 129
+G L++ K KPCGGAIP ++ +F +P ++ ++ +M++PS +VD +G
Sbjct: 31 SGRRVLLLD-KAGRIKPCGGAIPPRLIRDFAIPDALLVARIRCARMVAPSACSVDMPVGD 89
Query: 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTK 189
++GMV RE D YLRERA GA + +GLF ++ + L Y K
Sbjct: 90 G-----FVGMVDREHFDPYLRERAALAGADLRDGLFERIS-----RESAGLATVHYRSGK 139
Query: 190 GGVGEKRTLEVDAVIGADGANSRVAKSINAGD--YDYAIAFQERVKIPDEKMVYYENLAE 247
GG E+ ++ V+GADGA S V ++ G A+ E V+ P E + +
Sbjct: 140 GG--EEHRVQARLVVGADGATSTVGRAEIPGHARMRQVFAYHEIVRRPAETG-HDGARCD 196
Query: 248 MYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQL--ATRN-RAKDKILGGKIIR 304
+Y +SPDFY W+FP + V+VGTG+ K F L A R+ RA + + IR
Sbjct: 197 VYYQGRLSPDFYAWIFPHGETVSVGTGSAR-----KGFSLRSAIRDLRADTGLDACETIR 251
Query: 305 VEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGT 363
E P+P P R +GR V L GDAAG V SGEGIY+A GR+ AEA G
Sbjct: 252 REGAPLPLKPLRRWDNGRDVLLAGDAAGVVAPASGEGIYYAMLGGRLAAEAAGAFLATGD 311
Query: 364 RMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSY 423
++++ + +W +L ++Q V+YRS+ RE FV +C D+ VQ++T+D+Y
Sbjct: 312 ARALAQARKRFMRLHGRVFW----ILGMMQWVWYRSDTLRERFVSICKDKDVQQLTWDAY 367
Query: 424 LYKRVVPGNPLEDLKLAVNTIGSLVR 449
+ K +V P ++ + L R
Sbjct: 368 MNKELVRAKPAAHARIFFKDLAHLFR 393
>gi|218533163|ref|YP_002423979.1| geranylgeranyl reductase [Methylobacterium extorquens CM4]
gi|218525466|gb|ACK86051.1| geranylgeranyl reductase [Methylobacterium extorquens CM4]
Length = 397
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/386 (33%), Positives = 198/386 (51%), Gaps = 31/386 (8%)
Query: 72 NGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVD--IGQ 129
+G L++ K KPCGGAIP ++ +F +P ++ ++ +M++PS +VD +G
Sbjct: 31 SGRRVLLLD-KAGRIKPCGGAIPPRLIRDFAIPDALLVARIRCARMVAPSARSVDMPVGD 89
Query: 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTK 189
++GMV RE D YLRERA GA + +GLF ++ + L Y K
Sbjct: 90 G-----FVGMVDREHFDPYLRERAALAGADLRDGLFERIT-----RESAGLATVHYRSGK 139
Query: 190 GGVGEKRTLEVDAVIGADGANSRVAKSINAGD--YDYAIAFQERVKIPDEKMVYYENLAE 247
GG E+ ++ VIGADGA S V ++ G A+ E V+ P E + +
Sbjct: 140 GG--EEHRVQARLVIGADGATSTVGRAEIPGHARMRQVFAYHEIVRRPAETR-HDGARCD 196
Query: 248 MYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQL--ATRN-RAKDKILGGKIIR 304
+Y +SPDFY W+FP + V+VGTG+ K F L A R+ RA + + IR
Sbjct: 197 VYYQGRLSPDFYAWIFPHGETVSVGTGSAR-----KGFSLRSAIRDLRADTGLDACETIR 251
Query: 305 VEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGT 363
E P+P P R +GR V L GDAAG V SGEGIY+A GR+ AEA G
Sbjct: 252 REGAPLPLKPLRRWDNGRDVLLAGDAAGVVAPASGEGIYYAMLGGRLAAEAAGAFLATGD 311
Query: 364 RMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSY 423
++++ + +W +L ++Q V+YRS+ RE FV +C D+ VQ++T+D+Y
Sbjct: 312 ARALAQARKRFMRLHGRVFW----ILGMMQWVWYRSDTLRERFVSICKDKDVQQLTWDAY 367
Query: 424 LYKRVVPGNPLEDLKLAVNTIGSLVR 449
+ K +V P ++ + L R
Sbjct: 368 MNKELVRAKPAAHARIFFKDLAHLFR 393
>gi|170525202|gb|ACB20960.1| geranylgeranyl reductase [Solanum laciniatum]
Length = 108
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/108 (78%), Positives = 95/108 (87%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF+KMD+P+ PYVL+YT YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKAPNSPYVLHYTSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEK 238
G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER+KI D+K
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIKISDDK 108
>gi|254564186|ref|YP_003071281.1| geranylgeranyl reductase [Methylobacterium extorquens DM4]
gi|254271464|emb|CAX27479.1| geranylgeranyl reductase [Methylobacterium extorquens DM4]
Length = 397
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/386 (33%), Positives = 198/386 (51%), Gaps = 31/386 (8%)
Query: 72 NGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVD--IGQ 129
+G L++ K KPCGGAIP ++ +F +P ++ ++ +M++PS +VD +G
Sbjct: 31 SGRRVLLLD-KAGRIKPCGGAIPPRLIRDFAIPDALLVARIRCARMVAPSARSVDMPVGD 89
Query: 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTK 189
++GMV RE D YLRERA GA + +GLF ++ + L Y K
Sbjct: 90 G-----FVGMVDREHFDPYLRERAALAGADLRDGLFERIT-----RESAGLATVHYRSGK 139
Query: 190 GGVGEKRTLEVDAVIGADGANSRVAKSINAGD--YDYAIAFQERVKIPDEKMVYYENLAE 247
GG E+ ++ VIGADGA S V ++ G A+ E V+ P E + +
Sbjct: 140 GG--EEHRVQARLVIGADGATSTVGRAEIPGHARMRQVFAYHEIVRRPAETG-HDGARCD 196
Query: 248 MYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQL--ATRN-RAKDKILGGKIIR 304
+Y +SPDFY W+FP + V+VGTG+ K F L A R+ RA + + IR
Sbjct: 197 VYYQGRLSPDFYAWIFPHGETVSVGTGSAR-----KGFSLRSAIRDLRADTGLDACETIR 251
Query: 305 VEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGT 363
E P+P P R +GR V L GDAAG V SGEGIY+A GR+ AEA G
Sbjct: 252 REGAPLPLKPLRRWDNGRDVLLAGDAAGVVAPASGEGIYYAMLGGRLAAEAAGAFLATGD 311
Query: 364 RMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSY 423
++++ + +W +L ++Q V+YRS+ RE FV +C D+ VQ++T+D+Y
Sbjct: 312 ARALAQARKRFMRLHGRVFW----ILGMMQWVWYRSDTLRERFVSICKDKDVQQLTWDAY 367
Query: 424 LYKRVVPGNPLEDLKLAVNTIGSLVR 449
+ K +V P ++ + L R
Sbjct: 368 MNKELVRAKPAAHARIFFKDLAHLFR 393
>gi|124267964|ref|YP_001021968.1| geranylgeranyl reductase [Methylibium petroleiphilum PM1]
gi|124260739|gb|ABM95733.1| geranylgeranyl reductase [Methylibium petroleiphilum PM1]
Length = 330
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 181/341 (53%), Gaps = 25/341 (7%)
Query: 117 MISPSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNF 174
M+SP++ VDI P E ++GMV R+ D +LR RA +GA G F + L R+
Sbjct: 1 MVSPTDKRVDI-----PIENGFVGMVDRDAFDEWLRARAAGSGAQRQIGSFER--LTRDD 53
Query: 175 EQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAG--DYDYAIAFQERV 232
+ V++Y + R++ VIGADGA S VA+ AG A+ E V
Sbjct: 54 DGVSVVHYQARERPGDAASAPRSVRARCVIGADGARSAVARQAIAGAERNPCVFAYHEIV 113
Query: 233 KIPDEKMVYYE-NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLAT-- 289
+ P K V Y+ + ++Y +SPDFYGWVFP D +++GTG+ K F L
Sbjct: 114 RAPLAKPVGYDGSRCDVYYRGSLSPDFYGWVFPHGDTLSIGTGSAD-----KGFSLRAAV 168
Query: 290 -RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKS 347
R R+ + G + +R E PIP P R +GR V L GDAAG V SGE IY+A S
Sbjct: 169 GRLRSDSGLQGAQTLRREGAPIPMKPLRRWDNGRDVLLAGDAAGVVAPASGECIYYAMAS 228
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
GR+ AEA+ + G D LR+ ++ K + ++VL V+Q +Y S+ RE FV
Sbjct: 229 GRLAAEAVESALQTG----DGRCLRQARRRFMKAHGTVFRVLGVMQWFWYSSDRRRERFV 284
Query: 408 EMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
+C D VQ++TF+SY+ K +V P+ +++ +G L+
Sbjct: 285 TICEDRDVQQLTFESYMNKELVRKKPMAHVRIFFKDMGHLL 325
>gi|170525186|gb|ACB20953.1| geranylgeranyl reductase [Solanum betaceum]
gi|170525212|gb|ACB20965.1| geranylgeranyl reductase [Solanum mauritianum]
Length = 108
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/108 (78%), Positives = 95/108 (87%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF+KMD+P+ PYVL+YT YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKAPNAPYVLHYTSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEK 238
G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER+KI D+K
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIKISDDK 108
>gi|170524969|gb|ACB20845.1| geranylgeranyl reductase [Physalis alkekengi var. franchetii]
gi|170524977|gb|ACB20849.1| geranylgeranyl reductase [Physalis alkekengi]
gi|170525140|gb|ACB20930.1| geranylgeranyl reductase [Physalis alkekengi]
Length = 107
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 85/107 (79%), Positives = 93/107 (86%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR RA + GASV+NGLF+KMD+P+ PYVLYYT YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRNRAAEAGASVLNGLFLKMDMPKAPNSPYVLYYTAYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER+KI D+
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIKISDD 107
>gi|170525184|gb|ACB20952.1| geranylgeranyl reductase [Jaltomata hunzikeri]
Length = 108
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 83/108 (76%), Positives = 96/108 (88%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR+RA + GA+V+NGLF+KMD+P++ PYVL+YT YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRDRAAEAGAAVLNGLFLKMDMPKSPNSPYVLHYTSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEK 238
G GEKRTLEVDAVIGADGANSRVAK+INAGDY+YAIAFQER+KI D+K
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKAINAGDYEYAIAFQERIKISDDK 108
>gi|170525200|gb|ACB20959.1| geranylgeranyl reductase [Solanum amotapense]
Length = 108
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 85/108 (78%), Positives = 95/108 (87%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF+KMD+P+ PYVL+YT YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKVPNAPYVLHYTSYDSKTD 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEK 238
G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER+KI D+K
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIKISDDK 108
>gi|170525204|gb|ACB20961.1| geranylgeranyl reductase [Solanum atropurpureum]
Length = 108
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 85/108 (78%), Positives = 94/108 (87%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLRERA + GASV+NGLF+KMD+P+ PYVL+YT YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRERAAEAGASVLNGLFLKMDMPKAQNAPYVLHYTSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEK 238
G GEK TLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER+KI D+K
Sbjct: 61 GAGEKCTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIKISDDK 108
>gi|170525053|gb|ACB20887.1| geranylgeranyl reductase [Physalis alkekengi var. franchetii]
Length = 107
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 84/107 (78%), Positives = 94/107 (87%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF+KMD+P+ PYVLYYT YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKAPNSPYVLYYTAYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER++I D+
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIRISDD 107
>gi|170525190|gb|ACB20954.1| geranylgeranyl reductase [Solanum hirtum]
gi|170525218|gb|ACB20968.1| geranylgeranyl reductase [Solanum tequilense]
Length = 108
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/108 (78%), Positives = 94/108 (87%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLRERA + GASV+NGLF+KMD+P+ PYVL+YT YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRERAAEAGASVLNGLFLKMDMPKAPNAPYVLHYTSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEK 238
G GEK TLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER+KI D+K
Sbjct: 61 GAGEKCTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIKISDDK 108
>gi|170525206|gb|ACB20962.1| geranylgeranyl reductase [Solanum tridynamum]
Length = 108
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/108 (78%), Positives = 93/108 (86%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLRERA GASV+NGLF+KMD+P+ PYVL+YT YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRERAATAGASVLNGLFLKMDMPKAPNAPYVLHYTSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEK 238
G GEK TLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER+KI D+K
Sbjct: 61 GAGEKCTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIKISDDK 108
>gi|170524971|gb|ACB20846.1| geranylgeranyl reductase [Physalis alkekengi]
gi|170524973|gb|ACB20847.1| geranylgeranyl reductase [Physalis alkekengi var. alkekengi]
gi|170524975|gb|ACB20848.1| geranylgeranyl reductase [Physalis alkekengi]
gi|170525051|gb|ACB20886.1| geranylgeranyl reductase [Physalis alkekengi]
gi|170525164|gb|ACB20942.1| geranylgeranyl reductase [Witheringia solanacea]
Length = 107
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/107 (78%), Positives = 93/107 (86%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR RA + GASV+NGLF+KMD+P+ PYVL+YT YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRNRAAEAGASVLNGLFLKMDMPKAPNSPYVLHYTAYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER+KI D+
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIKISDD 107
>gi|170525168|gb|ACB20944.1| geranylgeranyl reductase [Lycianthes biflora]
Length = 107
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/107 (77%), Positives = 94/107 (87%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF+KMD+P+ PYVL+YT YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKAPNSPYVLHYTSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKRT+EVDAVIGADGANSRVAKSINAGDY+YAIAFQER+KI D+
Sbjct: 61 GAGEKRTIEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIKISDD 107
>gi|170525089|gb|ACB20905.1| geranylgeranyl reductase [Physalis crassifolia]
gi|170525116|gb|ACB20918.1| geranylgeranyl reductase [Physalis lanceifolia]
gi|170525170|gb|ACB20945.1| geranylgeranyl reductase [Capsicum annuum]
Length = 107
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/107 (78%), Positives = 93/107 (86%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR RA + GASV+NGLF+KMD+P+ PYVL+YT YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRNRAAEAGASVLNGLFLKMDMPKAPNAPYVLHYTAYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER+KI D+
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIKISDD 107
>gi|393722856|ref|ZP_10342783.1| geranylgeranyl reductase [Sphingomonas sp. PAMC 26605]
Length = 405
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/396 (31%), Positives = 195/396 (49%), Gaps = 34/396 (8%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LA++G L++R KPCGGAIP + +F +P ++ + T +M++PS VD+
Sbjct: 23 LAQSGRRVLLLDRG-GRIKPCGGAIPPRAIADFAIPEHLLVARATSARMVAPSAKVVDMP 81
Query: 129 QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGT 188
++G+V R D +LR RA GA + G F++++ R+ P V+
Sbjct: 82 VG---DGFVGLVDRADFDEWLRARAAIAGAERLTGRFVRIE--RDAGHPVVVVRATR--- 133
Query: 189 KGGVGEKRTLEVDAVIGADGANSRVAKS--INAGDYDYAIAFQERVKIPDEKMV------ 240
G E+R + VIGADGA S VA++ + A+ E + P
Sbjct: 134 --GEAEQR-IATRCVIGADGARSEVARTQLVGVPPVPCVFAYHEIIAAPRGGDGDGGGDG 190
Query: 241 -------YYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRA 293
+ +++ SPDFY WVFP D ++G G+ KG + +A RA
Sbjct: 191 GGDRGIDFDPARCDVFYQGKHSPDFYAWVFPHGDTASIGVGS-ARKGFGLRASVAA-LRA 248
Query: 294 KDKILGGKIIRVEAHPIPEHPRPRRLSGRVALV-GDAAGYVTKCSGEGIYFAAKSGRMCA 352
+ + + +R E PIP P R +GR LV GDAAG V SGEGIY+A GR A
Sbjct: 249 QTGLDACETLRCEGAPIPLKPLKRWDNGRDVLVAGDAAGVVAPASGEGIYYAMAGGRYAA 308
Query: 353 EAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCAD 412
EAI G +++L + +W +L +LQ +Y ++ RE FV+MCAD
Sbjct: 309 EAIEAYLATGKAAALRQARKRFLRAHGRVFW----ILGILQYFWYANDKRRERFVKMCAD 364
Query: 413 EYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
VQ++T+D+Y++KR+V P L++ + + L+
Sbjct: 365 PDVQRLTWDAYMHKRLVRAEPAAHLRIFLKDMRHLL 400
>gi|170525210|gb|ACB20964.1| geranylgeranyl reductase [Solanum mitlense]
Length = 108
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/108 (78%), Positives = 93/108 (86%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLRERA GASV+NGLF+KMD+P+ PYVL+YT YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRERAAAAGASVLNGLFLKMDMPKAPNAPYVLHYTSYDSKTK 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEK 238
G GEK TLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER+KI D+K
Sbjct: 61 GAGEKCTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIKISDDK 108
>gi|170525192|gb|ACB20955.1| geranylgeranyl reductase [Solanum anomalum]
Length = 108
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/108 (77%), Positives = 94/108 (87%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF+KMD+P+ PYVL+YT YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKVPNAPYVLHYTSYDSKTD 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEK 238
G GEKRTLEVDAVIGADGANSRVAKSI AGDY+YAIAFQER+KI D+K
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSITAGDYEYAIAFQERIKISDDK 108
>gi|170525194|gb|ACB20956.1| geranylgeranyl reductase [Solanum macrocarpon]
Length = 108
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/108 (78%), Positives = 92/108 (85%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLRERA GASV+NGLF+KMD+P PYVL+YT YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRERAAAAGASVLNGLFLKMDMPNAPNAPYVLHYTSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEK 238
G GEK TLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER+KI D+K
Sbjct: 61 GAGEKCTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIKISDDK 108
>gi|170525144|gb|ACB20932.1| geranylgeranyl reductase [Physalis angulata]
gi|170525146|gb|ACB20933.1| geranylgeranyl reductase [Physalis angulata]
Length = 107
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/107 (77%), Positives = 94/107 (87%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF+KMD+P+ PYVL+Y+ YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKAPNAPYVLHYSAYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER+KI D+
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIKISDD 107
>gi|170524947|gb|ACB20834.1| geranylgeranyl reductase [Physalis acutifolia]
gi|170524949|gb|ACB20835.1| geranylgeranyl reductase [Physalis acutifolia]
Length = 107
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/107 (77%), Positives = 94/107 (87%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDA+LR+RA + GASV+NGLF+KMD+P+ PYVL+YT YD
Sbjct: 1 LKPHEYIGMVRREVLDAHLRDRAAEAGASVLNGLFLKMDMPKAPNAPYVLHYTAYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER+KI D+
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIKISDD 107
>gi|170525158|gb|ACB20939.1| geranylgeranyl reductase [Vassobia breviflora]
gi|170525160|gb|ACB20940.1| geranylgeranyl reductase [Vassobia breviflora]
gi|170525162|gb|ACB20941.1| geranylgeranyl reductase [Vassobia fasciculata]
Length = 107
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 83/107 (77%), Positives = 93/107 (86%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF+KMD+P+ PYVL+YT YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKAPNSPYVLHYTAYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKR LEVDAVIGADGANSRVAKSINAGDY+YAIAFQER+KI D+
Sbjct: 61 GAGEKRALEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIKISDD 107
>gi|170525174|gb|ACB20947.1| geranylgeranyl reductase [Solanum sisymbriifolium]
Length = 108
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 83/108 (76%), Positives = 94/108 (87%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF+KMD+P+ PYVL+YT YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKAPNAPYVLHYTSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEK 238
G GEK TLE+DAVIGADGANSRVAKSINAGDY+YAIAFQER+KI D+K
Sbjct: 61 GAGEKCTLEIDAVIGADGANSRVAKSINAGDYEYAIAFQERIKISDDK 108
>gi|170524899|gb|ACB20810.1| geranylgeranyl reductase [Physalis longifolia var. subglabrata]
gi|170525128|gb|ACB20924.1| geranylgeranyl reductase [Physalis peruviana]
Length = 107
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 82/107 (76%), Positives = 94/107 (87%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF+KMD+P+ PYVL+Y+ YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKAPNAPYVLHYSSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER++I D+
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIRISDD 107
>gi|170525214|gb|ACB20966.1| geranylgeranyl reductase [Solanum lasiocarpum]
Length = 108
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/108 (77%), Positives = 93/108 (86%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLRERA + GASV+NGLF+KMD+P PYVL+YT YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRERAAEAGASVLNGLFLKMDMPNAPNAPYVLHYTSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEK 238
G GEK TLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER++I D+K
Sbjct: 61 GAGEKCTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIRISDDK 108
>gi|170524901|gb|ACB20811.1| geranylgeranyl reductase [Physalis sp. P112]
gi|170524903|gb|ACB20812.1| geranylgeranyl reductase [Physalis sp. P113]
gi|170524905|gb|ACB20813.1| geranylgeranyl reductase [Physalis philadelphica var. immaculata]
gi|170524907|gb|ACB20814.1| geranylgeranyl reductase [Physalis sp. P116]
gi|170524909|gb|ACB20815.1| geranylgeranyl reductase [Physalis sp. P118]
gi|170524911|gb|ACB20816.1| geranylgeranyl reductase [Physalis philadelphica var. immaculata]
gi|170524913|gb|ACB20817.1| geranylgeranyl reductase [Physalis philadelphica var. immaculata]
gi|170524915|gb|ACB20818.1| geranylgeranyl reductase [Physalis sp. P123]
gi|170524925|gb|ACB20823.1| geranylgeranyl reductase [Physalis sp. P086]
gi|170524933|gb|ACB20827.1| geranylgeranyl reductase [Physalis sp. P090]
gi|170524935|gb|ACB20828.1| geranylgeranyl reductase [Physalis sp. P092]
gi|170524939|gb|ACB20830.1| geranylgeranyl reductase [Physalis sp. P095]
gi|170524945|gb|ACB20833.1| geranylgeranyl reductase [Physalis ixocarpa]
gi|170524951|gb|ACB20836.1| geranylgeranyl reductase [Physalis sp. P098]
gi|170524957|gb|ACB20839.1| geranylgeranyl reductase [Physalis sp. P100]
gi|170524963|gb|ACB20842.1| geranylgeranyl reductase [Physalis sp. P108]
gi|170524965|gb|ACB20843.1| geranylgeranyl reductase [Physalis philadelphica var. immaculata]
gi|170524967|gb|ACB20844.1| geranylgeranyl reductase [Physalis philadelphica var. immaculata]
gi|170524979|gb|ACB20850.1| geranylgeranyl reductase [Physalis sp. P136]
gi|170524981|gb|ACB20851.1| geranylgeranyl reductase [Physalis sp. P137]
gi|170524983|gb|ACB20852.1| geranylgeranyl reductase [Physalis sp. P138]
gi|170524985|gb|ACB20853.1| geranylgeranyl reductase [Physalis sp. P139]
gi|170524987|gb|ACB20854.1| geranylgeranyl reductase [Physalis sp. P140]
gi|170524989|gb|ACB20855.1| geranylgeranyl reductase [Physalis sp. P142]
gi|170524991|gb|ACB20856.1| geranylgeranyl reductase [Physalis sp. P143]
gi|170524993|gb|ACB20857.1| geranylgeranyl reductase [Physalis sp. P145]
gi|170524995|gb|ACB20858.1| geranylgeranyl reductase [Physalis sp. P146]
gi|170524997|gb|ACB20859.1| geranylgeranyl reductase [Physalis sp. P147]
gi|170524999|gb|ACB20860.1| geranylgeranyl reductase [Physalis sp. P148]
gi|170525001|gb|ACB20861.1| geranylgeranyl reductase [Physalis sp. P149]
gi|170525003|gb|ACB20862.1| geranylgeranyl reductase [Physalis philadelphica var. immaculata]
gi|170525005|gb|ACB20863.1| geranylgeranyl reductase [Physalis sp. P126]
gi|170525007|gb|ACB20864.1| geranylgeranyl reductase [Physalis sp. P127]
gi|170525009|gb|ACB20865.1| geranylgeranyl reductase [Physalis sp. P128]
gi|170525011|gb|ACB20866.1| geranylgeranyl reductase [Physalis sp. P129]
gi|170525013|gb|ACB20867.1| geranylgeranyl reductase [Physalis nicandroides]
gi|170525015|gb|ACB20868.1| geranylgeranyl reductase [Physalis sp. P131]
gi|170525017|gb|ACB20869.1| geranylgeranyl reductase [Physalis sp. P132]
gi|170525019|gb|ACB20870.1| geranylgeranyl reductase [Physalis sp. P133]
gi|170525021|gb|ACB20871.1| geranylgeranyl reductase [Physalis sp. P134]
gi|170525023|gb|ACB20872.1| geranylgeranyl reductase [Physalis sp. P135]
gi|170525037|gb|ACB20879.1| geranylgeranyl reductase [Physalis sp. P076]
gi|170525043|gb|ACB20882.1| geranylgeranyl reductase [Physalis sp. P080]
gi|170525045|gb|ACB20883.1| geranylgeranyl reductase [Physalis aequata]
gi|170525047|gb|ACB20884.1| geranylgeranyl reductase [Physalis aequata]
gi|170525049|gb|ACB20885.1| geranylgeranyl reductase [Physalis aequata]
gi|170525055|gb|ACB20888.1| geranylgeranyl reductase [Physalis philadelphica]
gi|170525057|gb|ACB20889.1| geranylgeranyl reductase [Physalis philadelphica]
gi|170525061|gb|ACB20891.1| geranylgeranyl reductase [Physalis philadelphica]
gi|170525063|gb|ACB20892.1| geranylgeranyl reductase [Physalis philadelphica]
gi|170525065|gb|ACB20893.1| geranylgeranyl reductase [Physalis philadelphica]
gi|170525067|gb|ACB20894.1| geranylgeranyl reductase [Physalis philadelphica]
gi|170525071|gb|ACB20896.1| geranylgeranyl reductase [Physalis philadelphica]
gi|170525073|gb|ACB20897.1| geranylgeranyl reductase [Physalis philadelphica]
gi|170525075|gb|ACB20898.1| geranylgeranyl reductase [Physalis philadelphica]
gi|170525077|gb|ACB20899.1| geranylgeranyl reductase [Physalis philadelphica]
gi|170525079|gb|ACB20900.1| geranylgeranyl reductase [Physalis philadelphica]
gi|170525081|gb|ACB20901.1| geranylgeranyl reductase [Physalis philadelphica]
gi|170525083|gb|ACB20902.1| geranylgeranyl reductase [Physalis philadelphica]
gi|170525085|gb|ACB20903.1| geranylgeranyl reductase [Physalis pruinosa]
gi|170525091|gb|ACB20906.1| geranylgeranyl reductase [Physalis curassavica]
gi|170525095|gb|ACB20908.1| geranylgeranyl reductase [Physalis curassavica]
gi|170525112|gb|ACB20916.1| geranylgeranyl reductase [Physalis sp. P107]
gi|170525114|gb|ACB20917.1| geranylgeranyl reductase [Physalis ixocarpa]
gi|170525120|gb|ACB20920.1| geranylgeranyl reductase [Physalis mexicana]
gi|170525132|gb|ACB20926.1| geranylgeranyl reductase [Physalis peruviana]
gi|170525134|gb|ACB20927.1| geranylgeranyl reductase [Physalis philadelphica]
gi|170525136|gb|ACB20928.1| geranylgeranyl reductase [Physalis philadelphica]
gi|170525142|gb|ACB20931.1| geranylgeranyl reductase [Physalis angulata]
Length = 107
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/107 (76%), Positives = 94/107 (87%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF+KMD+P+ PYVL+Y+ YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKAPNDPYVLHYSSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER++I D+
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIRISDD 107
>gi|170525069|gb|ACB20895.1| geranylgeranyl reductase [Physalis philadelphica]
Length = 107
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/107 (76%), Positives = 94/107 (87%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF+KMD+P+ PYVL+Y+ YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKAPNXPYVLHYSSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER++I D+
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIRISDD 107
>gi|170524955|gb|ACB20838.1| geranylgeranyl reductase [Physalis acutifolia]
Length = 107
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 83/107 (77%), Positives = 93/107 (86%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDA+LR+RA + GASV+NGLF+KMD+P PYVL+YT YD
Sbjct: 1 LKPHEYIGMVRREVLDAHLRDRAAEAGASVLNGLFLKMDMPEAPNAPYVLHYTAYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER+KI D+
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIKISDD 107
>gi|170525122|gb|ACB20921.1| geranylgeranyl reductase [Physalis minima]
gi|170525124|gb|ACB20922.1| geranylgeranyl reductase [Physalis minima]
Length = 107
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 82/107 (76%), Positives = 93/107 (86%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR RA + GASV+NGLF+KMD+P+ PYVL+Y+ YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRNRAAEAGASVLNGLFLKMDMPKAPNAPYVLHYSSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER++I D+
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIRISDD 107
>gi|170524919|gb|ACB20820.1| geranylgeranyl reductase [Physalis sp. P083]
gi|170524923|gb|ACB20822.1| geranylgeranyl reductase [Physalis sp. P085]
gi|170525148|gb|ACB20934.1| geranylgeranyl reductase [Physalis coztomatl]
gi|170525150|gb|ACB20935.1| geranylgeranyl reductase [Physalis coztomatl]
gi|170525152|gb|ACB20936.1| geranylgeranyl reductase [Physalis coztomatl]
Length = 107
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 82/107 (76%), Positives = 94/107 (87%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF+KMD+P+ PYVL+Y+ YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKAPNDPYVLHYSAYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER++I D+
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIRISDD 107
>gi|170524897|gb|ACB20809.1| geranylgeranyl reductase [Physalis pubescens]
gi|170524921|gb|ACB20821.1| geranylgeranyl reductase [Physalis sp. P084]
gi|170524953|gb|ACB20837.1| geranylgeranyl reductase [Physalis sp. P099]
gi|170524959|gb|ACB20840.1| geranylgeranyl reductase [Physalis viscosa]
gi|170524961|gb|ACB20841.1| geranylgeranyl reductase [Physalis viscosa]
gi|170525025|gb|ACB20873.1| geranylgeranyl reductase [Physalis pubescens]
gi|170525027|gb|ACB20874.1| geranylgeranyl reductase [Physalis pubescens]
gi|170525029|gb|ACB20875.1| geranylgeranyl reductase [Physalis pubescens]
gi|170525031|gb|ACB20876.1| geranylgeranyl reductase [Physalis pubescens]
gi|170525033|gb|ACB20877.1| geranylgeranyl reductase [Physalis pubescens]
gi|170525035|gb|ACB20878.1| geranylgeranyl reductase [Physalis pubescens]
gi|170525087|gb|ACB20904.1| geranylgeranyl reductase [Physalis pruinosa]
gi|170525100|gb|ACB20910.1| geranylgeranyl reductase [Physalis pubescens]
gi|170525102|gb|ACB20911.1| geranylgeranyl reductase [Physalis pubescens]
gi|170525104|gb|ACB20912.1| geranylgeranyl reductase [Physalis fuscomaculata]
gi|170525106|gb|ACB20913.1| geranylgeranyl reductase [Physalis fuscomaculata]
gi|170525108|gb|ACB20914.1| geranylgeranyl reductase [Physalis fuscomaculata]
gi|170525110|gb|ACB20915.1| geranylgeranyl reductase [Physalis peruviana]
gi|170525130|gb|ACB20925.1| geranylgeranyl reductase [Physalis peruviana]
Length = 107
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 82/107 (76%), Positives = 94/107 (87%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF+KMD+P+ PYVL+Y+ YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKAPNAPYVLHYSAYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER++I D+
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIRISDD 107
>gi|170524943|gb|ACB20832.1| geranylgeranyl reductase [Physalis sp. P097]
Length = 107
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/107 (76%), Positives = 93/107 (86%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR RA + GASV+NGLF+KMD+P+ PYVL+Y+ YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRNRAAEAGASVLNGLFLKMDMPKAPNAPYVLHYSAYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER++I D+
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIRISDD 107
>gi|170525172|gb|ACB20946.1| geranylgeranyl reductase [Solanum lycopersicum]
gi|170525178|gb|ACB20949.1| geranylgeranyl reductase [Solanum oplocense]
Length = 108
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/108 (75%), Positives = 94/108 (87%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF++MD+P+ PYVL+YT YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLRMDMPKAPNSPYVLHYTSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEK 238
G GEK TLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER++I D+K
Sbjct: 61 GAGEKCTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIRISDDK 108
>gi|170525138|gb|ACB20929.1| geranylgeranyl reductase [Physalis philadelphica]
Length = 107
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/107 (76%), Positives = 93/107 (86%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF+KMD+P+ PYVL+Y+ YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKAPNXPYVLHYSSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER +I D+
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERXRISDD 107
>gi|170525216|gb|ACB20967.1| geranylgeranyl reductase [Solanum hispidum]
Length = 108
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/108 (77%), Positives = 92/108 (85%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLRERA GASV+NGLF+KMD+P+ PYVL+YT YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRERAAAAGASVLNGLFLKMDMPKGPNVPYVLHYTSYDSKTK 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEK 238
G GEK TLEVD VIGADGANSRVAKSINAGDY+YAIAFQER+KI D+K
Sbjct: 61 GAGEKCTLEVDVVIGADGANSRVAKSINAGDYEYAIAFQERIKISDDK 108
>gi|170525154|gb|ACB20937.1| geranylgeranyl reductase [Margaranthus solanaceus]
Length = 107
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/107 (75%), Positives = 94/107 (87%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF+KMD+P+ PYVL+Y+ YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKAPNDPYVLHYSSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKRTL+VDAVIGADGANSRVAKSINAGDY+YAIAFQER++I D+
Sbjct: 61 GAGEKRTLKVDAVIGADGANSRVAKSINAGDYEYAIAFQERIRISDD 107
>gi|170525126|gb|ACB20923.1| geranylgeranyl reductase [Physalis minima]
Length = 107
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/107 (75%), Positives = 93/107 (86%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
L+PHEYIGMVRREVLDAYLR RA + GASV+NGLF+KMD+P+ PYVL+Y+ YD
Sbjct: 1 LRPHEYIGMVRREVLDAYLRNRAAEAGASVLNGLFLKMDMPKAPNAPYVLHYSSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER++I D+
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIRISDD 107
>gi|170525041|gb|ACB20881.1| geranylgeranyl reductase [Physalis sp. P079]
Length = 107
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/107 (75%), Positives = 93/107 (86%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR+RA + GASV+N LF+KMD+P+ PYVL+Y+ YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRDRAAEAGASVLNSLFLKMDMPKAPNDPYVLHYSSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER++I D+
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIRISDD 107
>gi|170524927|gb|ACB20824.1| geranylgeranyl reductase [Physalis sp. P087]
Length = 107
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/107 (75%), Positives = 93/107 (86%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLD YLR+RA + GASV+NGLF+KMD+P+ PYVL+Y+ YD
Sbjct: 1 LKPHEYIGMVRREVLDVYLRDRAAEAGASVLNGLFLKMDMPKAPNDPYVLHYSSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER++I D+
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIRISDD 107
>gi|170524941|gb|ACB20831.1| geranylgeranyl reductase [Physalis sp. P096]
Length = 107
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/107 (75%), Positives = 94/107 (87%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF+KMD+P+ PYVL+Y+ YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKAPNDPYVLHYSSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKRTLEVDAVIGADGANSRVAKSINAG+Y+YAIAFQER++I D+
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGEYEYAIAFQERIRISDD 107
>gi|170524917|gb|ACB20819.1| geranylgeranyl reductase [Physalis sp. P082]
gi|170524929|gb|ACB20825.1| geranylgeranyl reductase [Physalis sp. P088]
gi|170524931|gb|ACB20826.1| geranylgeranyl reductase [Physalis sp. P089]
gi|170525093|gb|ACB20907.1| geranylgeranyl reductase [Physalis curassavica]
gi|170525097|gb|ACB20909.1| geranylgeranyl reductase [Physalis curassavica]
Length = 107
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/107 (75%), Positives = 93/107 (86%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF+KMD+P+ PYVL+Y+ YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKAPNDPYVLHYSSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAF ER++I D+
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFHERIRISDD 107
>gi|170525208|gb|ACB20963.1| geranylgeranyl reductase [Solanum racemosum]
Length = 108
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/108 (76%), Positives = 93/108 (86%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR RA + GASV+NGLF+KMD+P+ PYVL+YT YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRGRAAEAGASVLNGLFLKMDMPKAPNAPYVLHYTSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEK 238
G GEK +LEVDAVIGADGANSRVAKSINAGDY+YAIAFQER+KI D+K
Sbjct: 61 GAGEKCSLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIKISDDK 108
>gi|170525166|gb|ACB20943.1| geranylgeranyl reductase [Lycianthes dejecta]
Length = 107
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/107 (74%), Positives = 93/107 (86%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR+RA + GA+V+NGLF+KMD+P+ PYVL+YT YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRDRATEAGAAVLNGLFLKMDMPKAANAPYVLHYTSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEK TLEVDAV+GADGANSRVAKSINAG+Y+YAIAFQER+KI D+
Sbjct: 61 GAGEKLTLEVDAVVGADGANSRVAKSINAGEYEYAIAFQERIKISDD 107
>gi|170525039|gb|ACB20880.1| geranylgeranyl reductase [Physalis sp. P078]
gi|170525059|gb|ACB20890.1| geranylgeranyl reductase [Physalis philadelphica]
Length = 107
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 81/107 (75%), Positives = 93/107 (86%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF+KMD+P+ PYVL+Y+ YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKAPNDPYVLHYSSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAF ER++I D+
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFXERIRISDD 107
>gi|170525118|gb|ACB20919.1| geranylgeranyl reductase [Physalis mendocina]
Length = 107
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/107 (75%), Positives = 93/107 (86%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF+KMD+P+ PYVL+Y+ YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKAPNAPYVLHYSAYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKRT EVDAVIGADGANSRVAKSINAGDY+YAIAFQER++I D+
Sbjct: 61 GAGEKRTPEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIRISDD 107
>gi|170525176|gb|ACB20948.1| geranylgeranyl reductase [Solanum pinnatisectum]
gi|170525180|gb|ACB20950.1| geranylgeranyl reductase [Solanum microdontum]
gi|170525196|gb|ACB20957.1| geranylgeranyl reductase [Solanum bulbocastanum]
gi|170525198|gb|ACB20958.1| geranylgeranyl reductase [Solanum jamesii]
Length = 108
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/108 (75%), Positives = 93/108 (86%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LK HEYIGMVRREVLDAYLR+RA + GASV+NGLF++MD+P+ PYVL+YT YD
Sbjct: 1 LKSHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLRMDMPKAPNSPYVLHYTSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEK 238
G GEK TLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER++I D+K
Sbjct: 61 GAGEKCTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIRISDDK 108
>gi|170524937|gb|ACB20829.1| geranylgeranyl reductase [Physalis sp. P094]
Length = 107
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/107 (75%), Positives = 92/107 (85%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF+KMD+P+ PYVL+Y+ D
Sbjct: 1 LKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKAPNDPYVLHYSSCDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKRTLEVDAVIGADGANSRVAKSINAGDY YAIAFQER++I D+
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGDYKYAIAFQERIRISDD 107
>gi|83591968|ref|YP_425720.1| geranylgeranyl reductase [Rhodospirillum rubrum ATCC 11170]
gi|386348664|ref|YP_006046912.1| geranylgeranyl reductase [Rhodospirillum rubrum F11]
gi|16519339|emb|CAC84417.1| geranylgeranyl-bacteriopheophytin reductase [Rhodospirillum rubrum
ATCC 11170]
gi|83574882|gb|ABC21433.1| Geranylgeranyl reductase [Rhodospirillum rubrum ATCC 11170]
gi|346717100|gb|AEO47115.1| geranylgeranyl reductase [Rhodospirillum rubrum F11]
Length = 413
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 130/394 (32%), Positives = 198/394 (50%), Gaps = 31/394 (7%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
LA+ G L++ + KPCGGAIP ++ EF +P D+ +V+ + ++PS VD+
Sbjct: 32 LARAGRRVALLDPE-GRPKPCGGAIPPRLMSEFAIPDDLPCAQVSGARALAPSGRVVDMP 90
Query: 129 QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGT 188
T + MV R V D +LR RA + GA ++G F D + VL+ E
Sbjct: 91 IT---GAVVSMVDRAVFDPWLRARAHQAGACRLHGRFEGFDRQEDGAL-VVLWRPE---- 142
Query: 189 KGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIA-FQERVKIPDEKM-------- 239
G + V+GADGA S+VA AG +A + E ++ P
Sbjct: 143 --GAAVANRIVARYVVGADGARSKVAALAVAGAAPPCVAAYHEIIRAPAAPAASAPTPAT 200
Query: 240 ----VYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKD 295
Y ++ D+SPDFYGW+FP + +++G+GT +++ R A
Sbjct: 201 AAGPAYDPARCDVIYRGDISPDFYGWIFPHGETLSIGSGTAVKGFSLREAVALLRREAG- 259
Query: 296 KILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEA 354
+ G +++R E PIP PR R +GR V L+GDAAG V SGEGIY+A SG+M AEA
Sbjct: 260 -LDGLEVVRREGAPIPLRPRKRWDNGRDVVLIGDAAGVVAPASGEGIYYAMASGKMAAEA 318
Query: 355 IIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEY 414
+ E R++L+ KT+W L +LQ+ +YRS+ RE+FV +CAD
Sbjct: 319 LGEALAGAGPAALAQVRRRFLKAHGKTFWS----LGLLQRFWYRSDRWRESFVAICADRD 374
Query: 415 VQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
VQ++ + SYL K + GN +++ + L+
Sbjct: 375 VQRLVWQSYLTKDLARGNMGAYMRIFFKDVAHLI 408
>gi|393719891|ref|ZP_10339818.1| geranylgeranyl reductase [Sphingomonas echinoides ATCC 14820]
Length = 398
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 189/380 (49%), Gaps = 28/380 (7%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVD-- 126
LA+ G L++R KPCGGAIP + +F +P ++ K + +M++PS VD
Sbjct: 24 LARGGHHVLLLDRA-GRIKPCGGAIPPRAIADFAIPDHLLVAKASAARMVAPSGKTVDMP 82
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
+G ++G+V REV D +LR RA GA +G F++++ R + Y +
Sbjct: 83 VGDG-----FVGLVDREVFDEWLRARAALAGAERRSGTFVRIE--REAADVATVVYRDAR 135
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKS--INAGDYDYAIAFQERVKIP----DEKMV 240
G ++R + VIGADGA S VA+ G A+ E + P E++
Sbjct: 136 GA-----DERRVTTRCVIGADGARSGVARDEVKGGGTVPCVFAYHEIIAAPATGAGERVD 190
Query: 241 YYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGG 300
+ +++ SPDFY WVFP ++G G+ +++ A R + + G
Sbjct: 191 FAPERCDVFYQGKHSPDFYAWVFPHGATASIGVGSAQKGFALREAVAALRT--QTGLDGC 248
Query: 301 KIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGS 359
+R E PIP P R +GR V + GDAAG V SGEGIY+A GR AEA+
Sbjct: 249 ATLRREGAPIPLKPLKRWDNGRDVVVAGDAAGVVAPASGEGIYYAMAGGRHAAEAVTVFL 308
Query: 360 ENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMT 419
G +++L + +W +L ++Q +Y S+ RE FV++C D VQ++T
Sbjct: 309 ATGKASALRLARKRFLRAHGRVFW----ILGIMQYFWYSSDTRRERFVKICEDPDVQRLT 364
Query: 420 FDSYLYKRVVPGNPLEDLKL 439
+D+Y+ KR+V P L++
Sbjct: 365 WDAYMNKRLVRAKPGAHLRI 384
>gi|170525156|gb|ACB20938.1| geranylgeranyl reductase [Capsicum baccatum]
Length = 107
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/107 (77%), Positives = 92/107 (85%)
Query: 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
LKPHEYIGMVRREVLDAYLR RA GA+V+NGLF+KMD+P+ PYVL+YT YD
Sbjct: 1 LKPHEYIGMVRREVLDAYLRGRAADAGAAVLNGLFLKMDMPKAANAPYVLHYTSYDSKTN 60
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER+KI D+
Sbjct: 61 GAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIKISDD 107
>gi|152993033|ref|YP_001358754.1| geranylgeranyl hydrogenase [Sulfurovum sp. NBC37-1]
gi|151424894|dbj|BAF72397.1| geranylgeranyl hydrogenase [Sulfurovum sp. NBC37-1]
Length = 361
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 182/388 (46%), Gaps = 54/388 (13%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
+ +IGGGPAG A LA+ G ET L++R + KPCGG I L EFD+ ++I ++V
Sbjct: 6 ILIIGGGPAGSTLARYLAEAGKETILVQRNFNFRKPCGGGIRLDAFDEFDIDRELIRKEV 65
Query: 113 TKMKMI-SPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLP 171
+ ++ V VDI Q P +G+V R D YLR RAE GA+++ F+ +++
Sbjct: 66 NSIALVFGTKRVEVDISQM--P---LGIVDRVEFDTYLRNRAEDTGATLLEASFVDVEVC 120
Query: 172 RNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQER 231
Y++ E DG + + ++GADG NS+V K IN GD
Sbjct: 121 ----DGYIIVTIEQDGV------YKKIHAGYLVGADGVNSKVRKCIN-GD---------- 159
Query: 232 VKIPDEKMVYYENLA-------EMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKK 284
++P M Y +LA E + G V+ +Y W FP + +GT + I+
Sbjct: 160 -RVP-SAMTRYADLAHTAYKTCEFHFGSKVAGSYYAWAFPHTNGSNIGTLAGDDETHIQH 217
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
F + K K+LG + IP+ P RV VGD+A V + EGIY+A
Sbjct: 218 FMKQLDVKEKVKLLG--------YRIPQFENPVFYKDRVFFVGDSASQVLPFTYEGIYYA 269
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPARE 404
S + + + E + D +Y ++W+ TY + L LQK+F +++
Sbjct: 270 MASAHLLSAVLTE----------QADPSEYEKRWNDTYLQKFTTLQRLQKLFLKNDLTIA 319
Query: 405 AFVEMCADEYVQKMTFDSYLYKRVVPGN 432
+ + ++ VQ+ D +L R V N
Sbjct: 320 MMMHLYRNKAVQQRMVDFWLGHREVKLN 347
>gi|326404038|ref|YP_004284120.1| geranylgeranyl reductase [Acidiphilium multivorum AIU301]
gi|325050900|dbj|BAJ81238.1| geranylgeranyl reductase [Acidiphilium multivorum AIU301]
Length = 397
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 183/379 (48%), Gaps = 25/379 (6%)
Query: 76 TFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHE 135
+ L+ + KPCGGA+P ++ +FD+P ++ + +++SP V + +
Sbjct: 31 SVLLLDRAGRIKPCGGAVPPRLIHDFDIPDHLLVARARGARIVSPRGRQVSM--PIAGDG 88
Query: 136 YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEK 195
++GMV R+V D +LR RA GA + G +++ R + +++Y GE
Sbjct: 89 FVGMVDRDVFDEFLRARAASAGAVRLTGRHERIE--RAADGRTLVHYR--------AGEV 138
Query: 196 R-TLEVDAVIGADGANSRVAKSI--NAGDYDYAIAFQERVK---IPDEKMVYYENLAEMY 249
R T+ AVIGADGA S VA+ + AG A+ E ++ + ++Y
Sbjct: 139 RHTVAARAVIGADGAASAVARQMVPAAGAARRVFAYHEVIRAPAAGAAAAGWDGRRCDIY 198
Query: 250 VGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHP 309
VSPDFY W+FP + ++GTG+ +++ A R+ + + + IR E P
Sbjct: 199 YDARVSPDFYAWIFPHGETASIGTGSAVKGFSLRRAVAALRD--ETGLGQAETIRAEGAP 256
Query: 310 IPEHPRPRRLSG-RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDE 368
+P P R G V L GDAAG V SGEGIY+A G++ EA +G
Sbjct: 257 LPLKPLARWDDGVNVLLAGDAAGVVAPASGEGIYYAMLGGKLAGEAADAFCASGDARALR 316
Query: 369 GDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRV 428
R+++ + + VL ++Q +Y S+ RE FV +C D VQ +T+ +Y+ K +
Sbjct: 317 EARRRFM----AAHGMVFAVLGMMQDFWYASDRRRERFVAICGDADVQSITWQAYMEKAL 372
Query: 429 VPGNPLEDLKLAVNTIGSL 447
V P L++ I L
Sbjct: 373 VRAKPAAHLRIFAKNIAHL 391
>gi|206890701|ref|YP_002249403.1| geranylgeranyl hydrogenase, [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206742639|gb|ACI21696.1| geranylgeranyl hydrogenase, putative [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 378
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 192/410 (46%), Gaps = 59/410 (14%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFD--------LP 104
V V+GGGPAG AA LA+ G+ET LIE+ L KPCGG IP + EF+ +P
Sbjct: 5 VLVVGGGPAGSTAARLLAEKGIETVLIEKDLTFNKPCGGGIPSAGLKEFNILNKLQNQIP 64
Query: 105 LDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
+I VTK+K+ P + +++ +L+ E I + R+ D+++R+ AEK+G +I
Sbjct: 65 FNI----VTKVKIFPPFSEPIEV--SLQGGE-ILIFNRQSFDSFMRKLAEKSGVKIIEAE 117
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVA--KSINAGDY 222
+ ++ + + GE + +I ADG NSRV K + +Y
Sbjct: 118 LINIENSK-------------LTVRKKTGEVLEIYSKYIIAADGVNSRVCSIKGWSKPEY 164
Query: 223 DYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDI 282
+ ++ D K + E + G+ + FY WVFP D+ +VGTG DI
Sbjct: 165 YWTVSLHVLENFIDTK-----DTCEFWFGNSHASFFYSWVFPGVDYFSVGTGA----EDI 215
Query: 283 KKFQLATRNRAKDKILGGKI----IRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSG 338
KK + N +K GK+ ++ A+ IP+ R V GD G V S
Sbjct: 216 KKLKTLIDNFV-EKRFAGKLNINSFKLRAYKIPKWGRRSFFKENVIFCGDTLGTVMPISF 274
Query: 339 EGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398
EGIY++ KS + +EAI+ + DL Y + WD+ + + ++ Q +
Sbjct: 275 EGIYYSMKSAQFASEAIV-----------QKDLNLYKKLWDENFLKQFSIMKKFQDYMFG 323
Query: 399 SNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
++ + ++ + + +Q++ +L K G+ L + L + GSL+
Sbjct: 324 NDERIDNWLNIHRNPAIQELAMALWLRKE--HGSKL--IPLYLKAFGSLI 369
>gi|296272471|ref|YP_003655102.1| geranylgeranyl reductase [Arcobacter nitrofigilis DSM 7299]
gi|296096645|gb|ADG92595.1| geranylgeranyl reductase [Arcobacter nitrofigilis DSM 7299]
Length = 377
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 174/366 (47%), Gaps = 41/366 (11%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTK 114
++GGGP+G A L+KN + LIE+ + KPCGG I + EFD+P +I R++TK
Sbjct: 21 IVGGGPSGSTLARKLSKNNITNILIEKNDNYDKPCGGGIKSIVYEEFDIPKEIEFRRITK 80
Query: 115 MKMISPS-NVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRN 173
+ SP+ V+VD+ +T P I +V R+ D R+ A+K G ++ F+K +
Sbjct: 81 FDLFSPNKKVSVDLTRT--P---ISIVLRKDFDKLNRKLAQKAGTELLFSRFLKFERKDE 135
Query: 174 FEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVK 233
F V Y + D E + ++ ++GADG S V K + + +
Sbjct: 136 F----VYSYIKID------NETKIIKSLYLVGADGVTSTVRKQLTQPTQEKILTIYSN-- 183
Query: 234 IPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRA 293
IP++ + + E Y G+ +P+ Y WVFP D ++VG+ +K I L
Sbjct: 184 IPNKDI----DKCEFYFGEKFAPNEYAWVFPHGDKLSVGS---VYKEGIDTETLF--KNF 234
Query: 294 KDKILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCA 352
K+K+ + + IP + L +V L+GDAAG V S EGIY+ KS + A
Sbjct: 235 KNKVAPNDNTKGKGFYIPTWNKNSLLYEDKVFLLGDAAGQVLPFSYEGIYYVMKSALVLA 294
Query: 353 EAIIEGS-ENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCA 411
+AIIE EN Y W+K Y +K +QK+F S + +
Sbjct: 295 DAIIENKPEN------------YEINWNKKYKKRFKFFKTMQKIFLSSTFMTDKMIAFFQ 342
Query: 412 DEYVQK 417
+E +Q+
Sbjct: 343 NEKLQQ 348
>gi|296083961|emb|CBI24349.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 76/93 (81%)
Query: 43 SPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFD 102
+P L+ R LR AVIGGGPAG +AAETLA G+ETFL ER + KPCGGAIPLCM+ EF
Sbjct: 76 NPPLSGRKLRAAVIGGGPAGSSAAETLAAGGIETFLFERSPASSKPCGGAIPLCMLEEFS 135
Query: 103 LPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHE 135
+P +++DR+VT+MK+ISPSN+ VD G+TLKP++
Sbjct: 136 IPPELVDRRVTRMKIISPSNLTVDFGKTLKPND 168
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Query: 370 DLRK-YLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRV 428
DLR+ YL++WD Y TY++LD+L +VFY SN AREA VE+C +EYVQ+MTF+SYLYKR+
Sbjct: 196 DLRREYLKEWDGKYLVTYRLLDLLHRVFYGSNAAREALVELCGNEYVQRMTFESYLYKRL 255
Query: 429 VPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
G+ ED K+ NT GSL+R + R++ L +
Sbjct: 256 AEGDGWEDAKMVFNTFGSLIRCKIVGRDVQALRV 289
>gi|338991712|ref|ZP_08634537.1| BchP [Acidiphilium sp. PM]
gi|338205365|gb|EGO93676.1| BchP [Acidiphilium sp. PM]
Length = 268
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 130/263 (49%), Gaps = 15/263 (5%)
Query: 193 GEKR-TLEVDAVIGADGANSRVAKSI--NAGDYDYAIAFQERVKIPDEKMV---YYENLA 246
GE R T+ AVIGADGA S VA+ + AG A+ E ++ P +
Sbjct: 7 GEMRHTVAARAVIGADGAASAVARQMVPGAGAARRVFAYHEVIRTPAAGAAAAGWDGRRC 66
Query: 247 EMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILG-GKIIRV 305
++Y VSPDFY W+FP + ++GTG+ +++ A R ++ LG + IR
Sbjct: 67 DIYYDARVSPDFYAWIFPHGETASIGTGSAVKGFSLRRAVAALR---EETGLGQAETIRA 123
Query: 306 EAHPIPEHPRPRRLSG-RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTR 364
E P+P P R G V L GDAAG V SGEGIY+A G++ EA +G
Sbjct: 124 EGAPLPLKPLARWDDGVNVLLAGDAAGVVAPASGEGIYYAMLGGQLAGEAADAFCASG-- 181
Query: 365 MIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYL 424
D LR+ ++ + + VL ++Q +Y S+ RE FV +C D VQ +T+ +Y+
Sbjct: 182 --DARVLREARRRFMAAHGMVFAVLGMMQDFWYASDRRRERFVAICGDADVQSITWQAYM 239
Query: 425 YKRVVPGNPLEDLKLAVNTIGSL 447
K +V P L++ I L
Sbjct: 240 EKALVRAKPAAHLRIFAKNIAHL 262
>gi|435854158|ref|YP_007315477.1| geranylgeranyl reductase family protein [Halobacteroides halobius
DSM 5150]
gi|433670569|gb|AGB41384.1| geranylgeranyl reductase family protein [Halobacteroides halobius
DSM 5150]
Length = 377
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 162/320 (50%), Gaps = 30/320 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLC---MVGEFDLPLDII 108
V V+G GPAG + LAK + LIE + L K CGGAI L + + DL +II
Sbjct: 5 VIVVGAGPAGAYTSYNLAKENLNVLLIEEESLPRYKSCGGAISLKAKKYLADIDLT-NII 63
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
+ K+T + A++I + KP Y +V R+ D L +A++ GA VI+
Sbjct: 64 EDKITNITFDYNLQPAIEIDFS-KPFVY--LVMRDKFDNLLVNKAKEAGAKVISN----- 115
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTL-EVDAVIGADGANSRVAKSIN-AGDYDYAI 226
VL T+ D + V K L + + +IGADG NS +AK + + ++AI
Sbjct: 116 --------SKVLSITKNDRLE--VTTKDNLFKSNYLIGADGVNSLIAKELGLKTNMNHAI 165
Query: 227 AFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQ 286
F++ +K+ ++ + ++ G P YGW+FPK DH++VG + ++K +
Sbjct: 166 GFEKEIKVSTPQLANQRSRIKLDYG--AIPKGYGWIFPKQDHLSVGIASYKQGLNLK--E 221
Query: 287 LATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVTKCSGEGIYFAA 345
T K+KI + + + H +P + L + + LVGDAA V SGEGI++A
Sbjct: 222 KLTNYLNKEKIFIQEELNAKGHLLPVWQSEKTLNTNQGLLVGDAARLVDPLSGEGIFYAL 281
Query: 346 KSGRMCAEAIIEGSENGTRM 365
KSG++ ++AII+ E +
Sbjct: 282 KSGQLASKAIIDNLEKNKSL 301
>gi|224373591|ref|YP_002607963.1| geranylgeranyl hydrogenase [Nautilia profundicola AmH]
gi|223588411|gb|ACM92147.1| geranylgeranyl hydrogenase [Nautilia profundicola AmH]
Length = 324
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 152/338 (44%), Gaps = 45/338 (13%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
+++ +IGGGPAG AA LA LI+ KLD KPCGG I EFD+P +I
Sbjct: 1 MKIVIIGGGPAGSTAARKLAP-FYHVTLIQDKLDFDKPCGGGIKTKAFKEFDIPNKLIKH 59
Query: 111 KVTKMKM-ISPSNVAVDI-GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
+ + M + V VD+ G+ L +V+R+ D LR+ A++ GA +I G F
Sbjct: 60 SLDHVIMKYKNTTVKVDLNGKNL------SIVKRDEFDKKLRDLAQQAGAKIIYGRF--- 110
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
+ + + T+ L+ D +I ADG NS V K++N I
Sbjct: 111 ---KTVKNNKAIIKTD--------NSILNLDYDILIAADGVNSTVRKALNLPKIPATITH 159
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLA 288
R+ D+ Y E + D+ ++Y W FP + +GT +G+ +
Sbjct: 160 YARI---DQ---YKVQTCEFFFDFDIGGEYYAWAFPHENLTHIGT---VSRGNFENLCRY 210
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
+AK K G KI + + I + V VGDAAG V S EGIY+A KS
Sbjct: 211 LNVKAKPK--GYKIPTWQENIIIQ-------KNNVYFVGDAAGQVMPLSFEGIYYAIKSA 261
Query: 349 RMCAEAIIEG----SENGTRMIDEGDLRKYLEKWDKTY 382
+ A I+E +E R E L K LE +KT+
Sbjct: 262 DLLANCILENKNYPNEWNKRFFKEFSLMKKLEALNKTF 299
>gi|302391223|ref|YP_003827043.1| geranylgeranyl reductase [Acetohalobium arabaticum DSM 5501]
gi|302203300|gb|ADL11978.1| geranylgeranyl reductase [Acetohalobium arabaticum DSM 5501]
Length = 374
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 173/354 (48%), Gaps = 37/354 (10%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVG---EFDLPLDII 108
+ ++G GPAG A LA+ ++ L+E+ +L KPCGG + + G EF+L +I
Sbjct: 5 ILIVGAGPAGAYTAYRLAQADLDVLLLEKEELPRYKPCGGGLTSKVFGIIPEFNLD-HVI 63
Query: 109 DRKVTKMKMISPSNVAVDIG-QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK 167
+ K++ ++ NV I ++P Y+ M R+ D +L ++A++ G VI+
Sbjct: 64 EDKIS--TVVFTHNVEAPIKLDFIEPFTYMTM--RDKFDYFLVQQAKEVGVKVID----- 114
Query: 168 MDLPRNFEQPYVLYYTEYDGTK-GGVGEKRTLEVDAVIGADGANSRVAKSINAGD-YDYA 225
P V D + G + T + +IGADGA S VA+ + D + A
Sbjct: 115 -------NTPVVDIRCMSDRVRVCTTGSEYTAKY--IIGADGARSLVAQQLGLMDGVESA 165
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKF 285
IA+++ +K+ + + + + G + Y W+FPK DH +VG GT +KK
Sbjct: 166 IAYEKEIKVSSQLLEAQRGIMNLDYG--IIHGGYSWIFPKVDHFSVGVGTFAEGVSLKKS 223
Query: 286 QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSGEGIYFA 344
AK KI K ++ + HP+P R L+ R L+GDAAG V SGEGI++A
Sbjct: 224 --LEDYLAKGKIDDYKELKAKGHPLPVGGSKRELTYKRAVLIGDAAGLVDPLSGEGIFYA 281
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398
KS + + +++ G L +Y ++ P ++ ++++K+F++
Sbjct: 282 LKSADLASRILLDVIRRGK------SLSRYTTLINQEILPEFRKAELIKKIFFK 329
>gi|298675585|ref|YP_003727335.1| geranylgeranyl reductase [Methanohalobium evestigatum Z-7303]
gi|298288573|gb|ADI74539.1| geranylgeranyl reductase [Methanohalobium evestigatum Z-7303]
Length = 383
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 176/391 (45%), Gaps = 47/391 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVG--EFDLPLDIID 109
V V+G GPAG AAE AK G+ T +IE+ L K C G I + ++D+P++++
Sbjct: 4 VIVVGAGPAGSTAAEYTAKAGLSTMIIEKDSLPRDKTCAGGISSQALKHLDYDVPVNLVK 63
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK-M 168
R+ +++ + V ++ MV R+ D YL +A +G ++ +K +
Sbjct: 64 RQCFGARVLYGNQVL----ESRSDELIASMVSRKEFDNYLTTKAVNSGTKLLQKTRVKSL 119
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
D+ N + E T G + VIGADG NS A+ + A AF
Sbjct: 120 DIKSN--------HVEIHTTAG------VFKTKVVIGADGVNSVCARYVRAQLKPDETAF 165
Query: 229 QERVKIPDEKM---VYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV---THKGDI 282
IP K + Y ++ E + D YGWVFPK D+V+VG G + +
Sbjct: 166 SLASDIPLSKEYIDMNYPDIVEFHF--DKIKKGYGWVFPKDDYVSVGIGGIDAAKSSDSL 223
Query: 283 KKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRR-LSGRVALVGDAAGYVTKCSGEGI 341
K + N G I+ H +P R+ + RV L GDAAG+V GEGI
Sbjct: 224 KSYYEFINN------FGFDYIKPSGHFLPIGGVERKTYNNRVLLTGDAAGFVDAFLGEGI 277
Query: 342 YFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNP 401
+A SGR+ AE +++ + L KY +K + K ++ KVFYR +P
Sbjct: 278 NYALMSGRLAAETVVDAFYKND--FSKAMLSKYQDKCKHEFGDDLKYSYIVSKVFYR-HP 334
Query: 402 AREAFVEMCADEYVQKMTFDSYLYKRVVPGN 432
+ F +M A +KM Y + +V GN
Sbjct: 335 --DIFAKMLATN--EKML---YRFIHLVTGN 358
>gi|298675070|ref|YP_003726820.1| geranylgeranyl reductase [Methanohalobium evestigatum Z-7303]
gi|298288058|gb|ADI74024.1| geranylgeranyl reductase [Methanohalobium evestigatum Z-7303]
Length = 384
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 161/356 (45%), Gaps = 39/356 (10%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVG--EFDLPLDIID 109
V +IG GPAG AA+ A+ G++T LIE+ KL KPC G + + EF++P +I
Sbjct: 4 VLIIGAGPAGTTAAKHTAEKGLDTLLIEKQKLPRKKPCAGLVSQRALNSLEFEIPKHLIK 63
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIG-MVRREVLDAYLRERAEKNGASVINGLFMKM 168
R ++ ++V K +G +V R+ D YL ++A K GA +++ +
Sbjct: 64 RYCYGTRIKYKNHVLES-----KLDRPVGILVSRDEFDYYLSQQATKKGAEILDNTSVN- 117
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
N E YV T TKG + VIGADG NS A+ + +G AF
Sbjct: 118 --SVNAENDYVAVNT----TKG------LFKARIVIGADGVNSICARYVRSGSETNRNAF 165
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDF------YGWVFPKCDHVAVGTGTVTHKGDI 282
++P E + Y+ D DF Y W FPK +H++VG G + +
Sbjct: 166 SLISEVPAS----IEYINNKYL-DITEVDFGRVKNGYFWTFPKDNHISVGLGLFDNSSES 220
Query: 283 KKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVTKCSGEGI 341
K + + KD+ ++ H IP R + S RV LVGDAAG+V GEGI
Sbjct: 221 KPLK-TYYDYIKDQYF--DYLKPRGHFIPIGGYKRDVHSDRVILVGDAAGFVDAFLGEGI 277
Query: 342 YFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFY 397
+A SG++ A +IE E E YL + + + K + K FY
Sbjct: 278 SYAIMSGKIAANTVIEAFEEND--FSEDKFSTYLTRCEDVFGNNLKYSLIFSKFFY 331
>gi|260893131|ref|YP_003239228.1| geranylgeranyl reductase [Ammonifex degensii KC4]
gi|260865272|gb|ACX52378.1| geranylgeranyl reductase [Ammonifex degensii KC4]
Length = 375
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 163/352 (46%), Gaps = 32/352 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPL-DIIDR 110
V V+G GPAG A +LA+ G+ L+E+ KPCGG + +++
Sbjct: 7 VIVVGAGPAGALCACSLARAGLSVLLLEKTHFPREKPCGGGLTPKAAALLPFSFQSVVEG 66
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V + + P A++I +P + +VRRE+LD +L E+A + GA + G ++
Sbjct: 67 EVKRAILCLPGVEALEINWD-RPVCF--LVRREILDTHLAEQARQAGAFLREG----EEV 119
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
R E + T T GG + L VIGADGA SRVA+ + Y A
Sbjct: 120 VRIEETGEAVTVT----TAGGASYRAQL----VIGADGALSRVARLVGR-PYPRHFALAA 170
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATR 290
+ P + E + + + P YGWVFPK DH+ G G+ +++ +
Sbjct: 171 ALIPPP---AWAEKRDTILIDLEALPYGYGWVFPKIDHLNAGVGSFAATRELRFYW---E 224
Query: 291 NRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
N + L + R+ AHP+ + L GRV L+GDAAG V +GEG+Y A +S
Sbjct: 225 NFLRRNGLA-RPFRLRAHPLALAGKETELGRGRVMLLGDAAGLVDPLTGEGLYAAFRSAE 283
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNP 401
+ A AI+E + + E + +Y E + Y L ++FYR P
Sbjct: 284 LAARAILE------KGVGERAVSRYRELVKASLLREYHFAYRLARLFYRFLP 329
>gi|149194814|ref|ZP_01871908.1| Geranylgeranyl reductase [Caminibacter mediatlanticus TB-2]
gi|149134973|gb|EDM23455.1| Geranylgeranyl reductase [Caminibacter mediatlanticus TB-2]
Length = 324
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 168/379 (44%), Gaps = 65/379 (17%)
Query: 52 RVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRK 111
+V VIGGG AG +A LAK+ T + ++ D KPCGG + + +L +I
Sbjct: 3 KVLVIGGGVAGATSARLLAKHFDVTLIQDKTWD--KPCGGGVKRKIFKMHNLDKSLIKHL 60
Query: 112 VTKMKMISPS-NVAVDI-GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
+ ++M+ + +++D+ G+ L +V+RE D YLRE A+KNG ++I G F
Sbjct: 61 LDSIEMVYKNETISLDLKGKNL------AIVKREEFDNYLRELAKKNGTNLIYGKF---- 110
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
R FE+ L EK + D +I ADG NS V K +N I
Sbjct: 111 --RGFEKNKALVKIN--------NEKVLFDFDILIAADGVNSLVRKCLNLPPIPKVITHY 160
Query: 230 ERV-KIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDI--KKFQ 286
+ KI N + Y G++++ +Y W FP T TH G + K F+
Sbjct: 161 AKTDKIKT-------NTCKFYFGEEIAGKYYAWAFPH--------ETQTHIGSVEAKNFE 205
Query: 287 -LATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAA 345
L K+K G I + I + + VGDAAG V S EGIY+A
Sbjct: 206 NLCKYLNIKEKPKGYFIPTWQEDIIIQKEN-------IYFVGDAAGQVMPLSFEGIYYAI 258
Query: 346 KSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREA 405
KS + A +II + Y +W++ Y +K + +L+K+ + R+
Sbjct: 259 KSAEILAHSIINNLD-------------YKNEWNRRYLKKFKFMKMLEKI--NQSKLRKI 303
Query: 406 FVEMCADEYVQKMTFDSYL 424
V + + +Q + + +L
Sbjct: 304 MVNLHKYKLIQNFSVNLWL 322
>gi|410996521|gb|AFV97986.1| hypothetical protein B649_08370 [uncultured Sulfuricurvum sp.
RIFRC-1]
Length = 367
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 159/373 (42%), Gaps = 47/373 (12%)
Query: 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDII 108
+N V ++GGGPAG AA LA+ + L+++ KPCGG + L EF L I
Sbjct: 7 KNYDVLIVGGGPAGATAARFLAQKKYKVLLVQKSFTFEKPCGGGMVLKAFDEFALDKAKI 66
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
V +K ++PS VD+ +P + +V R D YLR A+ GA VI G
Sbjct: 67 SHYVNTIKFVTPSLFGVDVSLEKEP---LAIVNRLEFDTYLRTLAQNEGAEVIEG----- 118
Query: 169 DLPRNFEQPYVLYYTEYDG----TKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDY 224
Y+ YDG K E R ++ +I ADG NS V K++
Sbjct: 119 ------------YFKSYDGLFAYIKSNSLEFR-IQAKYIIAADGVNSTVRKAVTGTLPRR 165
Query: 225 AIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKK 284
+ +V+ P + E + G D++ +Y W F + +G K
Sbjct: 166 VLTLYAKVQQP------LTSKCEFWFGKDIAQGYYAWSFIHNEGTHIGLACEDESNVHKC 219
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
F L +K+ + + + IP + VGDAAG V+ + EGIY+A
Sbjct: 220 FGLFC-----EKLGLNYVPKARGYYIPVWKDDLYRKDNILFVGDAAGQVSPFTYEGIYYA 274
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPARE 404
S R EAI+ +GDL +Y + W K +K +++LQK+ R + E
Sbjct: 275 MCSARYAVEAIV-----------DGDLDQYKQLWQKNLQKRFKAMELLQKLLLRWDWIIE 323
Query: 405 AFVEMCADEYVQK 417
V++ + V +
Sbjct: 324 RVVKLLTNTTVHQ 336
>gi|372210864|ref|ZP_09498666.1| geranylgeranyl reductase [Flavobacteriaceae bacterium S85]
Length = 381
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 194/413 (46%), Gaps = 64/413 (15%)
Query: 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLDI 107
N +VA++G GP+G +AA LAK G+++ ++E++ L K CGG L G+ D+P D
Sbjct: 2 ENYQVAIVGSGPSGASAAFHLAKAGIKSIVLEKETLPRYKVCGGG--LVYRGKKDMPFD- 58
Query: 108 IDRKVTKMKMISPSNVAVDIGQTL--KPHE---YIGMVRREVLDAYLRERAEKNGASVIN 162
VT I+ V V +G+ L K H + +V R+ D + E+A+++G +++
Sbjct: 59 ----VTSAVDITFHEVDVYMGKNLHFKTHRDQPIVSLVMRDAFDKLMIEKAQEHGVTLL- 113
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGV---GEKRTLEVDAVIGADGANSRVAKSINA 219
E V+ + +K GV + TL+V VI ADG S++AK A
Sbjct: 114 ------------ENCKVIALS---SSKNGVMVETNQGTLQVQQVIAADGVYSQLAKM--A 156
Query: 220 G---DYDYAI-AFQERVKIPDEKMVYYENLA-EMYVGDDVSPDFYGWVFPKCDHVAVGTG 274
G D I A + V++ + +E L+ E+ D P YGW FPK H+++G
Sbjct: 157 GWEKDTRTLIPALEYEVEVDPKN---FERLSKEIRFDIDAIPGGYGWCFPKKHHLSIGVA 213
Query: 275 TVTHKGDIKKFQLATRNRAK----DKILGGKIIRVEAHPIPEHPR-PRRLSGRVALVGDA 329
+ D +K + + D+I+ I+ + IP PR + V L+GDA
Sbjct: 214 IIQKLKDEQKIKAYCAKYMQFLGIDEIVD---IKKYGYQIPVTPRLDGFVKNNVFLIGDA 270
Query: 330 AGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDK----TYWPT 385
AG+ + EGI A SG++ A+AI E +GDL+K + K T P
Sbjct: 271 AGFADPLTAEGISNAILSGKLVAKAIEES---------KGDLKKAAANYSKIIENTIMPE 321
Query: 386 YKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLK 438
L K+FY + R+ ++ + + +T D ++ ++ P N E +K
Sbjct: 322 LLTSMKLAKLFYSNKTVRKFLLKKYGQRFSEALT-DIFMGEKNYPKNVNEKIK 373
>gi|288819044|ref|YP_003433392.1| geranylgeranyl reductase [Hydrogenobacter thermophilus TK-6]
gi|384129790|ref|YP_005512403.1| geranylgeranyl reductase [Hydrogenobacter thermophilus TK-6]
gi|288788444|dbj|BAI70191.1| geranylgeranyl reductase [Hydrogenobacter thermophilus TK-6]
gi|308752627|gb|ADO46110.1| geranylgeranyl reductase [Hydrogenobacter thermophilus TK-6]
Length = 346
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 161/354 (45%), Gaps = 52/354 (14%)
Query: 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIE--RKLDNCKPCGGAIPLCMVG---EFDL 103
R V V+GGGPAG + A TLAK+G++ +++ RK+ C +P+ + EF
Sbjct: 2 RKYDVLVVGGGPAGSSCAYTLAKSGLKVLVVDFKRKIGTPVQCAEFVPVQLFNSFPEFFT 61
Query: 104 PLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVING 163
P + I ++V M +P G+T+ + ++ REV D ++ + A + GA + G
Sbjct: 62 P-ESISQEVDNMLHFTP------WGETVLMNSKGFVLNREVFDYHISQLAREEGAEYLLG 114
Query: 164 -LFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDY 222
LF+ M+ P+ + E T+ E+ +E + V+GADG SRVAK
Sbjct: 115 TLFVGMEGPK--------VWLERIHTR----ERFFVEANVVVGADGPRSRVAKQTGKHTK 162
Query: 223 DYAIAFQERV----KIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGT--V 276
D+ Q RV K+ D + + E + P YGWVFPK + VG G
Sbjct: 163 DFLTTAQVRVPLNTKVKDLLIYFREYI----------PGGYGWVFPKGESANVGVGIDPA 212
Query: 277 THKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKC 336
+ ++ ++ K+ + G K++ IP + RV LVGDA G+
Sbjct: 213 YNMNVMESLKIFLSELLKEGLTGEKVLSRTGGWIPAEGLLDVIRNRVLLVGDAGGFCHPI 272
Query: 337 SGEGIYFAAKSGRMCAEAIIEGSEN----------GTRMIDEGDLR-KYLEKWD 379
+G GI A SG M +AI G + GT + R KY+++WD
Sbjct: 273 TGGGIANAIISGTMAGKAIASGKLSDYEEEAWEVFGTTLERAAKKRKKYMKRWD 326
>gi|147676892|ref|YP_001211107.1| dehydrogenases [Pelotomaculum thermopropionicum SI]
gi|146272989|dbj|BAF58738.1| dehydrogenases [Pelotomaculum thermopropionicum SI]
Length = 386
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 153/350 (43%), Gaps = 30/350 (8%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPL-DIIDR 110
V + G GPAG A LA G+E ++E++ + KPCGG I D P D+I+
Sbjct: 5 VVIAGAGPAGSTLARRLAGAGLEVLVLEKEFMPREKPCGGGITYKAARLLDFPWQDVIED 64
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
V V + + P Y MV R D L +RA + GA ++ G +K D+
Sbjct: 65 TVHTAVFSYQGKSEVTV-RLKTPLAY--MVTRSSFDRMLADRARQAGACLVEGAPVK-DI 120
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGD-YDYAIAFQ 229
E V T GE T +GADG N R A + + +
Sbjct: 121 --AVENGLV--------TVAAAGE--TYHGRLFVGADGVNGRSAMLLGLHHPGETGPTLE 168
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQ-LA 288
V P E + + G P YGWVFPK D ++ G G T K +K+ + L
Sbjct: 169 AEVACPPEVLEQKRGTIRLDCG--AVPWGYGWVFPKRDRLSTGVGAFTRK--VKELKKLL 224
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVAL-VGDAAGYVTKCSGEGIYFAAKS 347
A++ + +I+ + +PIP R +R+ R AL +GDAAG V SGEGIY+A KS
Sbjct: 225 GGFLAREGLGSARILSLRGYPIPSGGRKKRIHSRSALLIGDAAGLVDPFSGEGIYYAIKS 284
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFY 397
+ AEAI++ +R EG Y D+ L +VFY
Sbjct: 285 AHLAAEAILD-----SRAQPEGAPGLYQSLVDRHVTAELMEARRLARVFY 329
>gi|268324388|emb|CBH37976.1| conserved hypothetical protein, geranylgeranyl reductase family
[uncultured archaeon]
Length = 385
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 149/320 (46%), Gaps = 37/320 (11%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPL--DIID 109
V VIG GP+G A++T A G+ T L+E++ + K CGGA+ + + D + D+I+
Sbjct: 6 VIVIGAGPSGAIASKTCAGKGLNTLLLEKEGMPRLKLCGGAVSISALSHLDFGIEKDLIE 65
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+ + + N +++ + + +V R+ DAYL +A G ++
Sbjct: 66 RECYGAR-VHFKNHQIEVRRKSR---LAILVSRDKFDAYLVSKAVDAGVALHEAEKATSI 121
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P EQP ++ T K VIGADG NS V+K + + F
Sbjct: 122 KP---EQPRIVVETN----------KEKYNTKVVIGADGVNSIVSKYVRDSYKPDELGFC 168
Query: 230 ERVKIP---DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTG----TVTHKGDI 282
+IP +E Y EN +++ G ++ YGWVFPK H +VG ++ + DI
Sbjct: 169 IAAEIPASNEEVNEYIENAIDLHYG--ITKFGYGWVFPKEKHFSVGVSGILPSMKNSRDI 226
Query: 283 KKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVTKCSGEGI 341
+ + D I AH IP R + S R+ LVGDAAG+V GEGI
Sbjct: 227 FIAFIKKLGFSSDVI-------THAHLIPAGGHEREVCSDRIILVGDAAGFVDPYQGEGI 279
Query: 342 YFAAKSGRMCAEAIIEGSEN 361
+A SG + AE ++E EN
Sbjct: 280 KYAFISGTLAAERVVESYEN 299
>gi|268326338|emb|CBH39926.1| conserved hypothetical protein, geranylgeranyl reductase family
[uncultured archaeon]
Length = 385
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 153/318 (48%), Gaps = 33/318 (10%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPL--DIID 109
V VIG GP+G A++T A G+ T L+E++ + K CGGA+ + + D + D+I+
Sbjct: 6 VIVIGAGPSGAIASKTCAGKGLNTLLLEKEGMPRLKLCGGAVSISALSHLDFGIEKDLIE 65
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R+ + + N +++ + + +V R+ DAYL +A G ++
Sbjct: 66 RECYGAR-VHFKNHQIEVKRKSR---LAILVSRDKFDAYLVSKAVDAGVALHEAEKATSI 121
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P EQP ++ T K VIGADG NS V+K + + F
Sbjct: 122 KP---EQPRIVVETN----------KEKYHAKVVIGADGVNSIVSKYVRDSYKPDELGFC 168
Query: 230 ERVKIP---DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVG-TGTVTHKGDIKKF 285
+IP +E Y EN +++ G ++ YGWVFPK H +VG G ++ + +
Sbjct: 169 IAAEIPASNEEVDEYIENAIDIHYG--ITNFGYGWVFPKEKHFSVGLCGILSSMKNSRDI 226
Query: 286 QLATRNRAKDKILGGKI-IRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVTKCSGEGIYF 343
+A + LG + AH IP R + S R+ LVGDAAG+V GEGI +
Sbjct: 227 FIAFLKK-----LGFSTDVVTHAHLIPAGGYEREVCSDRIILVGDAAGFVDPYHGEGIKY 281
Query: 344 AAKSGRMCAEAIIEGSEN 361
A+ SG++ A+ ++E EN
Sbjct: 282 ASISGKLAADRVVESYEN 299
>gi|406918242|gb|EKD56846.1| dehydrogenase (flavoprotein) [uncultured bacterium]
Length = 351
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 144/312 (46%), Gaps = 37/312 (11%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPLDIIDRK 111
V ++G GPAG AA+TLAK+ ++T LIE+ ++ K C G + + +P +I+ RK
Sbjct: 17 VVIVGAGPAGLWAAKTLAKSNLKTLLIEKNQIIGPKICAGGLTFKDITN-GIPKNILQRK 75
Query: 112 VTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLP 171
++ + SP L +G V R+ L +++++ + +I + ++L
Sbjct: 76 FNEVFIKSPKQYIKIASDKL----LVGTVNRQDLGQWMKKQITGDNIIIIRDQVLNINLK 131
Query: 172 RNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQER 231
+N E G + + + L IGADG+NS+V ++ + A+A+Q +
Sbjct: 132 QN----------ELRLKSGQIIKYKYL-----IGADGSNSQVRNALGLKQNNVALAYQYK 176
Query: 232 VKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRN 291
+K K+ E+ + D +Y W+FP DH +GTG D K F L
Sbjct: 177 IKKVFPKL-------EVIINVDRFGPWYIWIFPHWDHTLIGTGC-----DPKVFSLKINR 224
Query: 292 RAKDKILGGKIIRVEAHPIPEHPRPRRLSG----RVALVGDAAGYVTKCSGEGIYFAAKS 347
R +K L I V G + LVGDA G+ + +GEGI+ A S
Sbjct: 225 REFNKWLKENNIDVSQAEFQAWKINYDYQGFQFDNIFLVGDAGGFTSGLTGEGIFAAMTS 284
Query: 348 GRMCAEAIIEGS 359
G+ A+ II+ S
Sbjct: 285 GKEAAKKIIDPS 296
>gi|52550110|gb|AAU83959.1| geranylgeranyl reductase [uncultured archaeon GZfos35A2]
Length = 385
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 150/332 (45%), Gaps = 61/332 (18%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPL--DIID 109
V VIG GP+G A++T A NG++T L E++ + K CGGA+ + + D + D+I+
Sbjct: 6 VIVIGAGPSGAIASKTCAGNGLKTLLFEKEGIPRLKLCGGAVSTSALSDLDFGIEKDLIE 65
Query: 110 R---------KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV 160
R K ++++ S +A+ +V R+ DAYL +A G ++
Sbjct: 66 RECYGARVHFKTHQIEVKRKSRLAI-------------LVSRDKFDAYLVSKAVDAGVAL 112
Query: 161 INGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAG 220
P EQ ++ T K VIGADG NS V+K +
Sbjct: 113 HEAEKATSIKP---EQSRIVVETN----------KEKYNAKVVIGADGVNSIVSKYVRDS 159
Query: 221 DYDYAIAFQERVKIP---DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT 277
+ F +IP +E Y EN +++ G ++ YGWVFPK H +VG +
Sbjct: 160 YKPDELGFCIAAEIPASNEEVNEYIENAIDIHYG--ITNFGYGWVFPKEKHFSVGLCGI- 216
Query: 278 HKGDIKKFQLATRNRAKD------KILGGKI-IRVEAHPIPEHPRPRRL-SGRVALVGDA 329
L + ++D K LG + AH IP R + S R+ LVGDA
Sbjct: 217 ---------LPSMKNSRDIFIAFIKKLGFSTDVNSHAHLIPAGGYEREVCSDRIMLVGDA 267
Query: 330 AGYVTKCSGEGIYFAAKSGRMCAEAIIEGSEN 361
AG+V GEGI +A S ++ AE ++E EN
Sbjct: 268 AGFVDPYQGEGIKYAFISAKLAAERVVESYEN 299
>gi|163783707|ref|ZP_02178694.1| hypothetical protein HG1285_15109 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881032|gb|EDP74549.1| hypothetical protein HG1285_15109 [Hydrogenivirga sp. 128-5-R1-1]
Length = 345
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 156/351 (44%), Gaps = 54/351 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFD--LPLDII 108
V ++G GPAG AA L++N V L++ K P C +P+ + +F P D++
Sbjct: 5 VLIVGSGPAGATAAYILSRNDVRVLLVDIKRAPGVPVQCAEFVPIQLKHKFPEFFPKDVV 64
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-INGLFMK 167
++V M +P V +++ Y+ + R+ D + ERA K G + + +F+
Sbjct: 65 AQEVRDMVHFTPWGEVV----SMQSEGYV--LHRDRFDRGIVERALKGGTELRLRTVFL- 117
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSI--NAGDY--- 222
FE V + E+ T+ ++ +E + VIGADG SRVA+ + G +
Sbjct: 118 -----GFEDGKV--WLEHIDTR----KRYAVEAELVIGADGPRSRVARLTGEHTGSFLAT 166
Query: 223 -DYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHK-- 279
+ +ERV + ++Y+ D P YGWVFPK + VG G H
Sbjct: 167 AQFTFPLRERVS---DLLIYFR---------DYIPGGYGWVFPKGELANVGVGIDPHYPV 214
Query: 280 GDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGE 339
++ + + ++G +++ IP R L G V LVGDA G+ +G
Sbjct: 215 NVMESLRRLVAELTSEGVVGKEVLGRTGGWIPAEGVKRPLRGNVVLVGDAGGFCHPITGG 274
Query: 340 GIYFAAKSGRMCAEAIIEG-----SENGTRMIDEGDLR------KYLEKWD 379
GI A +G M EAI+EG SE + R KY++ WD
Sbjct: 275 GIANAVYTGAMAGEAILEGDLEDYSEESMELFGSSLNRAAEKRIKYMKTWD 325
>gi|301064028|ref|ZP_07204490.1| putative digeranylgeranylglycerophospholipid reductase [delta
proteobacterium NaphS2]
gi|300441873|gb|EFK06176.1| putative digeranylgeranylglycerophospholipid reductase [delta
proteobacterium NaphS2]
Length = 349
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 149/342 (43%), Gaps = 45/342 (13%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDIIDR 110
+ +IG GPAG +AA T AK G++ ++E++ + P C IP VG+ ++ + +
Sbjct: 8 ILIIGAGPAGSSAAITAAKMGMDVLVVEQRPEIGVPVQCAEYIPAPFVGQLNMGTGFVVQ 67
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
KV+KM+ I P ++ M+ R+ D L E+A GA G +
Sbjct: 68 KVSKMRTILPDGSGTEMAAPGF------MIHRDRFDQALAEKAIDLGA----GFLLSTKA 117
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK--SINAGDYDYAIAF 228
+ E+ V+ K GE R + +IGADG SR A +++ D AI +
Sbjct: 118 AKRTEKGQVI-------IKKASGETRIIGPRIIIGADGPRSRTASWCAVSTRDLLPAIQY 170
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYG---WVFPKCDHVAVGTGTVTHKGDIKK- 284
R++ P + Y +SP+FYG W+FPK + VG G +K
Sbjct: 171 SLRLRAPMDHTEIY-----------LSPEFYGGYGWLFPKGETANVGLGMKHRNAPLKGI 219
Query: 285 ----FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEG 340
+ + R DKI G+ + IP P + + G + L GDAAG+ +G G
Sbjct: 220 RPLLLEFVEQLRKTDKI-EGQPLGSTGGMIPAAPLEKAVYGNILLAGDAAGHTHPVTGAG 278
Query: 341 IYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTY 382
++ A GRM E + + G L KY +W +
Sbjct: 279 VFTAVSCGRMAGRWAAE----AIKKKNLGLLSKYDHEWRDLF 316
>gi|390944672|ref|YP_006408433.1| geranylgeranyl reductase [Belliella baltica DSM 15883]
gi|390418100|gb|AFL85678.1| geranylgeranyl reductase family protein [Belliella baltica DSM
15883]
Length = 380
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 162/384 (42%), Gaps = 46/384 (11%)
Query: 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLDI 107
++ V V+G GPAGG AA +K G+ ++E++ L K CGG L G LP DI
Sbjct: 2 KHYDVVVVGSGPAGGMAAYEASKAGLSVAILEKESLPRYKTCGGG--LVFRGRDMLPFDI 59
Query: 108 ---IDRKVTKMKMISPSNVAVDIGQTLKPHE---YIGMVRREVLDAYLRERAEKNGASVI 161
I+++ + + + Q L H + MV R+ D + E A+ GA+++
Sbjct: 60 SNVIEKEYNDLYIYFDH-----LDQPLFAHRTYPVVTMVMRDKFDQLIIENAKSFGATLL 114
Query: 162 NGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGD 221
+K F L ++ D + VI ADG AK +
Sbjct: 115 ENHTLK---GLEFGDKLTLKTSQGD-----------ISATYVIAADGVLGPTAKFAGWTE 160
Query: 222 YDYAI-AFQERVKIPDEKMVYYENLA-EMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHK 279
I A + V++P + YE LA E DV P YGW FPK +H+++G GT
Sbjct: 161 TRQLIPALEYEVEVPQD---VYERLAKEARFDIDVIPKGYGWCFPKKNHLSIGVGTFKK- 216
Query: 280 GDIKKFQLATRNRAKDKILG-GKIIRVEAHPIPEHPRPRR---LSGRVALVGDAAGYVTK 335
+K L A KILG ++ +AH PR+ + V L GD+AG+
Sbjct: 217 ---RKINLREHYYAYLKILGIDDVLSEQAHGFQVPISPRKDGFVKNNVFLTGDSAGFADP 273
Query: 336 CSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKV 395
+ EGI + SG + A+AI + + + KYLE + P K L +
Sbjct: 274 LTAEGITNSLYSGGLAAQAISQHFNDPAQA-----EAKYLEDLNLRLLPELKFAGYLAHL 328
Query: 396 FYRSNPAREAFVEMCADEYVQKMT 419
FY R ++ Y K+T
Sbjct: 329 FYNQKTIRNYLMKSNGQRYCDKIT 352
>gi|404330795|ref|ZP_10971243.1| geranylgeranyl reductase [Sporolactobacillus vineae DSM 21990 =
SL153]
Length = 384
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 159/354 (44%), Gaps = 36/354 (10%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPLDI---I 108
V + G GP G + A +LA G+ ++E+ + K CGG + + +P+DI I
Sbjct: 8 VIITGAGPGGTSLAASLANTGLHVLILEKQRFPRYKVCGGGVTRRAL--LKMPVDISPVI 65
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
++T + +I + +I MV R +D L + A GA +
Sbjct: 66 RDQITTFVTVEGDQ---EIQEFKHKTPFIYMVMRTEMDQLLAKHAVDCGAELK------- 115
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS--INAGDYDYAI 226
E +V+ E++ + +IGADG NS VAK + +G A+
Sbjct: 116 ------EDAFVIKVVEHNDQVNVYTRNQQYSCRYLIGADGVNSIVAKQSGLMSGRRK-AL 168
Query: 227 AFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT-HKGDIKKF 285
A + +K V Y+N ++ + PD Y WVFPK D ++ G G+ + ++ + ++
Sbjct: 169 ALEYELKCDRITTVNYKN--KVVIDYTSVPDGYAWVFPKNDILSAGIGSYSLNQKQMSRY 226
Query: 286 QLATRNRAKDKILGGKIIRVEAHPIPEH-PRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
L+ ++ K L G ++ + + R + ++ R AL+GDAAG V +GEGIY+A
Sbjct: 227 LLSFLDKRK---LSGYLLSAKGSFLSAGGVRQKIMTQRTALIGDAAGLVDSFAGEGIYYA 283
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398
S + AE + E ++G R Y D+ P + LD + FY+
Sbjct: 284 LWSAALLAERLKETIKDGHR----DAFAAYQNDVDQLILPELRALDQFGREFYK 333
>gi|289547862|ref|YP_003472850.1| geranylgeranyl reductase [Thermocrinis albus DSM 14484]
gi|289181479|gb|ADC88723.1| geranylgeranyl reductase [Thermocrinis albus DSM 14484]
Length = 362
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 143/327 (43%), Gaps = 50/327 (15%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLDIIDRKVT 113
VIG GP G +AA +LA+ G++ LIERK L K C G C+ L RK
Sbjct: 7 VIGAGPGGSSAARSLAQKGLKVLLIERKTLPRFKLCAG----CLSARTSTLLPEGWRKKV 62
Query: 114 KMKMISPSNVAVDIG--QTLKPHEYIG-MVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+ I + G L+ + I +V R D +L E+A + G ++
Sbjct: 63 -LNTIRGGILGFKGGLETHLRAKDDIAFIVDRRDFDLFLVEKALEEGVDLL--------- 112
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
++ L + E G+ V +RT+ D ++GADG +S+VA+ + +++
Sbjct: 113 ----QEEEFLTFQEERGSYRVVTNRRTIICDFLVGADGVHSKVAR---------LLGYRK 159
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDF------YGWVFPKCDHVAVGTGTVTHKGDIKK 284
R E E Y GD+V D YGWVFPK + +VG T + +K
Sbjct: 160 RKLFRS-----VEFFLESYGGDEVRIDIGFVKRGYGWVFPKGEGASVGMATAEKEDLMKT 214
Query: 285 F---QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGI 341
F R K+LG I E + R V LVGDAAG V GEGI
Sbjct: 215 FLEYSSYITERVPQKVLGWHIPYAEGWDDVSLGKER-----VLLVGDAAGLVDPLLGEGI 269
Query: 342 YFAAKSGRMCAEAIIEGSENGTRMIDE 368
Y+A KSG++ A++E + + + E
Sbjct: 270 YYAIKSGQLAGRAVVESPSHPSTLYRE 296
>gi|83589660|ref|YP_429669.1| geranylgeranyl reductase [Moorella thermoacetica ATCC 39073]
gi|83572574|gb|ABC19126.1| Geranylgeranyl reductase [Moorella thermoacetica ATCC 39073]
Length = 378
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 135/322 (41%), Gaps = 49/322 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEF-----DLPLD 106
V + G GPAG LA+ G++ + +R + KPCGG + GE DL D
Sbjct: 5 VLICGAGPAGSTCGRLLARQGLKVAIFDRARFPRYKPCGGGLTGKAQGELEAGWEDLIED 64
Query: 107 IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFM 166
+ + P + + I MV RE D++L A + GA V +G +
Sbjct: 65 TTREVIFYHRQERPLKITCE-------QPVIKMVSREKFDSWLLTEAARAGAEVRDGYRV 117
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGVG----EKRTLEVDAVIGADGANSRVAKSINAGDY 222
T T GGV + T E ++GADGA S V +S+
Sbjct: 118 ----------------TGVTETAGGVKVQGQDGCTWEGRFLVGADGALSLVRRSLPFKPG 161
Query: 223 DYA-IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTH--K 279
A I + V + + Y + G P YGWVFPK DH++VG G+ T K
Sbjct: 162 GTAGITLECEVPVDAGLLTSYRGQVHLSYGG--IPYGYGWVFPKGDHLSVGIGSFTRRVK 219
Query: 280 GDIKKFQLATRNR-----AKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVT 334
G + F R A + G I + H +GR LVGDAAG V
Sbjct: 220 GLRRYFDTFCRGLGLAVPANLRCRGAVIPAADGQAGVFH------TGRALLVGDAAGLVD 273
Query: 335 KCSGEGIYFAAKSGRMCAEAII 356
SGEGIY+A +SGR+ AE I+
Sbjct: 274 PFSGEGIYYALRSGRLAAETIM 295
>gi|336476215|ref|YP_004615356.1| geranylgeranyl reductase [Methanosalsum zhilinae DSM 4017]
gi|335929596|gb|AEH60137.1| geranylgeranyl reductase [Methanosalsum zhilinae DSM 4017]
Length = 384
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 146/310 (47%), Gaps = 34/310 (10%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEF--DLPLDIID 109
V V+G GPAG AA A +G+ T LIE+ + KPC G + + +LP +I+
Sbjct: 4 VIVVGAGPAGSTAARYTAMSGLRTMLIEKERFPRIKPCAGGVSRYALENLGIELPPSLIE 63
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK-M 168
+++ ++ ++ +++ E V+R+ D +L ++A + GA+ ++ +K +
Sbjct: 64 KRIKGARVWYKNSYM----ESMNDEEVAVTVQRDRFDKFLADQASRAGANFLDNTPVKGI 119
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
D+ + + E+ + +IGADG N A+++ + +AF
Sbjct: 120 DIDSDCATVHT--------------EQGSYCAKMIIGADGMNGVCARNVRSPYGKEEVAF 165
Query: 229 QERVKIPDEKMVYYENLAEM---YVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKF 285
+IP +NL+ M + GD P YGWVFPK D + VG G + G
Sbjct: 166 SMEAEIPVNDDFLDDNLSSMVQFHFGD--VPRGYGWVFPKKDRICVGIGEI---GPDWNR 220
Query: 286 QLATRNRAKDKILGGKIIRVEAH--PIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYF 343
+ + R +K LG ++ + P+ H R + R+ L GD+AG V GEGI +
Sbjct: 221 PVDSYRRFLNK-LGMDYVKPRGYMLPVGGHTR-NTYNDRILLTGDSAGLVDAFLGEGIAY 278
Query: 344 AAKSGRMCAE 353
A SG++ AE
Sbjct: 279 AIMSGKLAAE 288
>gi|147817031|emb|CAN68730.1| hypothetical protein VITISV_024816 [Vitis vinifera]
Length = 146
Score = 99.0 bits (245), Expect = 5e-18, Method: Composition-based stats.
Identities = 65/150 (43%), Positives = 85/150 (56%), Gaps = 16/150 (10%)
Query: 1 MASMALKSFTGLRQSPQEQQHPHFIAQALPRQQKFRVSAAKTSPKLTNRNLRVAVIGGGP 60
M S+ LK+F QS P + L V A + SP+++ RN +V V+GGG
Sbjct: 1 MTSIXLKTFIEHLQS--RPCLPRQASSCLHFSSGLHVVAGRFSPEVSGRNPKVVVVGGGL 58
Query: 61 AGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISP 120
AG +A LA++GVE F E ++D E +LPLD DR+VTKM+M SP
Sbjct: 59 AGSSAVGMLAEDGVEMFSEEWRMDK--------------ESNLPLDTTDRRVTKMQMTSP 104
Query: 121 SNVAVDIGQTLKPHEYIGMVRREVLDAYLR 150
SNV VDIG+TLKPHEYI M RE D+Y +
Sbjct: 105 SNVVVDIGRTLKPHEYIRMAXREHFDSYFQ 134
>gi|282896317|ref|ZP_06304339.1| geranylgeranyl reductase [Raphidiopsis brookii D9]
gi|281198813|gb|EFA73692.1| geranylgeranyl reductase [Raphidiopsis brookii D9]
Length = 404
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 150/338 (44%), Gaps = 45/338 (13%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEF--DL-PL 105
N V V G GPAG AA AK G++ LIE+ L K CGG +P +VG DL P
Sbjct: 3 NYDVIVCGAGPAGTTAAWVAAKTGLKVALIEKYPLPRHKTCGGGMP-AVVGSLLPDLVPE 61
Query: 106 DIIDRKVTKM----KMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVI 161
++ +V M K P A++ + +P + MV+R V D L +A + GA +
Sbjct: 62 AVVACQVNYMRHTWKFDHPILGAINPPGS-EPELKLWMVQRSVFDNALARQASQAGADLR 120
Query: 162 NGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLE-VDAVIGADGANSRVAKSINAG 220
+GL +K + V+ G+G + VIGADGAN AK+ N
Sbjct: 121 DGLAVK---SLEIDSHGVIVRARSFKNDSGIGWGEFVAYAPYVIGADGANGITAKTANLR 177
Query: 221 DYDYAIAFQERVKIPDEKMVYYENLAEMYVGD---DV-------SPDFYGWVFPKCDHVA 270
+ER ++ Y N + + D DV P+ YGW+FPK DH+
Sbjct: 178 --------RERTMALAMEVEYPYNWTQNHPKDLRPDVIHLEYGAVPNGYGWIFPKEDHLN 229
Query: 271 VGTGTVTHKGDIKKFQLATRNRAKDKIL----------GGKIIRVEAHPIP-EHPRPRRL 319
VG G + + R + + I ++IR HP+P H R +
Sbjct: 230 VGAGLFRPDRRDCRSDHSIRAQLQQAIFQYLDFMDISYNPELIRFHGHPLPIWHGREKCH 289
Query: 320 S--GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
+ G++ L GDAAG + G+GI A KSG + AE +
Sbjct: 290 TPDGKILLAGDAAGLINPFFGDGILHAVKSGMLAAECV 327
>gi|52549753|gb|AAU83602.1| geranylgeranyl reductase [uncultured archaeon GZfos32E4]
gi|52550201|gb|AAU84050.1| geranylgeranyl reductase [uncultured archaeon GZfos36D8]
Length = 420
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 171/413 (41%), Gaps = 55/413 (13%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDIIDR 110
V V+G GPAG A+T A+ G++ LIER + P CG C+ E + +DI R
Sbjct: 32 VVVVGAGPAGSITAKTAAERGLDVLLIERNPEIGVPVKCG----ECVSKEIERFVDIDRR 87
Query: 111 KVTK--MKMISPSNVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMK 167
V I+ + +++ E +G V R++ D L + A + GA V
Sbjct: 88 WVCAGIRGTITYGPDGTKVILSVEGAEEVGYVLERKIFDKCLAQEAARAGAEV------- 140
Query: 168 MDLPRNFEQPYVLY----YTE--YDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGD 221
R Q Y + Y + Y T G+ R + D V+GADG SRV K G
Sbjct: 141 ----RVKTQVYGVVNDGGYAKGVYARTAEAEGDIR-ISADVVVGADGVESRVGKW---GG 192
Query: 222 YDYAIAFQERVKIPDEKMVYYE---NLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVT 277
D + + M E E++ GDDV+P YGW+FPK DH A VG G
Sbjct: 193 IDTTLHLADVATCAQFLMCDIEVNNEYCEIFFGDDVAPKGYGWIFPKGDHCANVGLGI-- 250
Query: 278 HKGDIKKFQLATRNRAKDKILG----GKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAGY 332
GD+ R+ + G GKII +P P ++ + LVGDAA +
Sbjct: 251 -GGDVSNENHCARDYLNAFVGGKFPNGKIIAEMYGAVPLSGPVYETVANGLILVGDAARH 309
Query: 333 VTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGD-----LRKYLEKWDKTYWPTYK 387
V +G GI A + G + + I + + E D LR+Y ++W K + K
Sbjct: 310 VNPITGGGILEAMQGGEIAGDVI-------AKAVQENDFSKRRLREYEKRWRKEFGKVLK 362
Query: 388 V-LDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKL 439
L V S+ F E + K + L K ++ NP KL
Sbjct: 363 AGLKTKNIVLGLSSQDLNRFFHALEGEMITKEFSERALLKEIIKRNPRILFKL 415
>gi|52548545|gb|AAU82394.1| geranylgeranyl reductase [uncultured archaeon GZfos17C7]
Length = 396
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 171/413 (41%), Gaps = 55/413 (13%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDIIDR 110
V V+G GPAG A+T A+ G++ LIER + P CG C+ E + +DI R
Sbjct: 8 VVVVGAGPAGSITAKTAAERGLDVLLIERNPEIGVPVKCG----ECVSKEIERFVDIDRR 63
Query: 111 KVTK--MKMISPSNVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMK 167
V I+ + +++ E +G V R++ D L + A + GA V
Sbjct: 64 WVCAGIRGTITYGPDGTKVILSVEGAEEVGYVLERKIFDKCLAQEAARAGAEV------- 116
Query: 168 MDLPRNFEQPYVLY----YTE--YDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGD 221
R Q Y + Y + Y T G+ R + D V+GADG SRV K G
Sbjct: 117 ----RVKTQVYGVVNDGGYAKGVYARTAEAEGDIR-ISADVVVGADGVESRVGKW---GG 168
Query: 222 YDYAIAFQERVKIPDEKMVYYE---NLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVT 277
D + + M E E++ GDDV+P YGW+FPK DH A VG G
Sbjct: 169 IDTTLHLADVATCAQFLMCDIEVNNEYCEIFFGDDVAPKGYGWIFPKGDHCANVGLGI-- 226
Query: 278 HKGDIKKFQLATRNRAKDKILG----GKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAGY 332
GD+ R+ + G GKII +P P ++ + LVGDAA +
Sbjct: 227 -GGDVSNENHCARDYLNAFVGGKFPNGKIIAEMYGAVPLSGPVYETVANGLILVGDAARH 285
Query: 333 VTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGD-----LRKYLEKWDKTYWPTYK 387
V +G GI A + G + + I + + E D LR+Y ++W K + K
Sbjct: 286 VNPITGGGILEAMQGGEIAGDVI-------AKAVQENDFSKRRLREYEKRWRKEFGKVLK 338
Query: 388 V-LDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKL 439
L V S+ F E + K + L K ++ NP KL
Sbjct: 339 AGLKTKNIVLGLSSQDLNRFFHALEGEMITKEFSERALLKEIIKRNPRILFKL 391
>gi|406909480|gb|EKD49725.1| hypothetical protein ACD_63C00064G0007 [uncultured bacterium]
Length = 340
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 139/310 (44%), Gaps = 33/310 (10%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP-CGGAIPLCMVGEFDLPLDIIDRK 111
+ +IG GPAG AAETLAK G + ++E+ + K C + EF + I+R
Sbjct: 4 IIIIGAGPAGLMAAETLAKAGKKVLVLEKNKEYGKKICAEGTVALAISEFPFLKNSIERS 63
Query: 112 VTKMKMISPSNVAVDIGQTLKPHE-YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
K+ S +N A +K E + + R+ L A+K A ++ G + +++
Sbjct: 64 FDLFKVNSKNNFAY-----IKHKEPFFFTINRKRLSEIQENNAKKASAEILTGTKV-IEI 117
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
NF + E ++ + +IGADG S V K + + IA
Sbjct: 118 SENFVK---------------TSEGDQIQFEQLIGADGNKSIVRKYLKIPSKKFGIAVHF 162
Query: 231 RV-KIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLAT 289
+V KI +E E+++ FY W+FP + ++GTG D KK +
Sbjct: 163 KVPKIVEE--------PEIFLDTQKWHCFYAWIFPHQKYTSIGTGIAFGNHDAKKTKSHL 214
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
+ K+K + K I +EA I + + + L G+++G ++ +GEGIY A GR
Sbjct: 215 QMLCKEKRVDLKNINLEADIINTDFQGFKFKN-IFLAGESSGLISMLTGEGIYNALVMGR 273
Query: 350 MCAEAIIEGS 359
A+ II G+
Sbjct: 274 EIAKMIIHGN 283
>gi|289548637|ref|YP_003473625.1| geranylgeranyl reductase [Thermocrinis albus DSM 14484]
gi|289182254|gb|ADC89498.1| geranylgeranyl reductase [Thermocrinis albus DSM 14484]
Length = 348
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 143/315 (45%), Gaps = 35/315 (11%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEF-DLPLD-II 108
V V+G GPAG A L+K G + L++ K P C +P + F L D I
Sbjct: 8 VLVVGAGPAGSTCAWELSKRGAKVILVDFKRAVGVPVQCAEFVPAQLFNSFPQLFTDKAI 67
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-INGLFMK 167
++V KM +P D+ + P Y+ + REV D+++ + A K GA + + +F+
Sbjct: 68 AQRVEKMIHFTPWG---DVVEMSSPG-YV--LNREVFDSHIAQLAVKEGAQLFLRCIFLG 121
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIA 227
Q V E D + + T++ D V+GADG SRVAK G +
Sbjct: 122 F-------QDGVCLVEEIDTRR-----RFTVDADMVVGADGPRSRVAKLTGGGCSHFLTT 169
Query: 228 FQERV--KIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD--IK 283
Q + ++P + ++ Y + P YGWVFPK VG G G ++
Sbjct: 170 AQVTLPLRVPLKDLLIYFR--------EYIPGGYGWVFPKGSVANVGVGLDPAFGINVME 221
Query: 284 KFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYF 343
+ + K+K++ K+++ IP R + G+V LVGDA G+ +G GI
Sbjct: 222 ALRTFLKELLKEKVVEEKVLKRTGGWIPADGLIRPVRGKVLLVGDAGGFCHPITGGGIAN 281
Query: 344 AAKSGRMCAEAIIEG 358
A SG M +A+ EG
Sbjct: 282 AVMSGSMAGKALAEG 296
>gi|73669113|ref|YP_305128.1| hypothetical protein Mbar_A1602 [Methanosarcina barkeri str.
Fusaro]
gi|85681848|sp|P96800.2|Y1602_METBF RecName: Full=Uncharacterized protein Mbar_A1602; AltName:
Full=ORF3
gi|72396275|gb|AAZ70548.1| hypothetical protein Mbar_A1602 [Methanosarcina barkeri str.
Fusaro]
Length = 387
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 144/322 (44%), Gaps = 28/322 (8%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
++ + V +IG GPAG AA LAK+ + +I++ KPC G + FD P
Sbjct: 2 ISMKKYDVVIIGAGPAGSYAAYMLAKSKINVLVIDKYSFPRYKPCAGGLTAKAFNSFDFP 61
Query: 105 LDIIDRKVTKMKMISPSNVAVDIGQTLKPHE-YIGMVRREVLDAYLRERAEKNGASVING 163
+ + T + S N I + ++ + M+ R+ D +L ++A +GA+ ++G
Sbjct: 62 ISKEVKYSTNSIVTSYKN---QIFHNISGNKTLVKMIERKEFDDFLIKKAVDSGATFLDG 118
Query: 164 LFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYD 223
+ + N E + + +IGADG N V ++ N + D
Sbjct: 119 MKVTEITWENAEFSIKT-------------DSEFFRCNYLIGADGTNGIVNRTFNIVERD 165
Query: 224 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVS--PDFYGWVFPKCDHVAVGTGTVTHKGD 281
F + P + +N+ + + D P+ Y W+FPK ++V VG T K
Sbjct: 166 -LYGFAVEINCPVSR----DNIGKFNMTFDFGTVPNGYLWIFPKDEYVCVGAYTTNRK-- 218
Query: 282 IKKFQLATRNRAKDKILGGKIIRVEAHPIPEHP-RPRRLSGRVALVGDAAGYVTKCSGEG 340
+K Q + + L + +++ H IP + ++ LVGDAAG+ +GEG
Sbjct: 219 MKNIQKYLLDYIEKLGLVPESEKLKGHIIPYYGINYKQPDFPCVLVGDAAGFGEYWTGEG 278
Query: 341 IYFAAKSGRMCAEAIIEGSENG 362
IY+A KSG + AE I ++G
Sbjct: 279 IYYAVKSGTIAAEVISSSIKSG 300
>gi|325967633|ref|YP_004243825.1| geranylgeranyl reductase [Vulcanisaeta moutnovskia 768-28]
gi|323706836|gb|ADY00323.1| geranylgeranyl reductase [Vulcanisaeta moutnovskia 768-28]
Length = 380
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 141/312 (45%), Gaps = 46/312 (14%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAI---PLCMVGEFDLPLDIIDR 110
++G GPAG AA A+ G+ +I+R + KPCGG + + ++ F + L+ + R
Sbjct: 9 IVGAGPAGSMAAYVAARLGLRVLVIDRFRFPRMKPCGGGLTQKSVILLRSFGIDLNNVIR 68
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
T +++ +N I +P I +V R+ D YL A + GA +N + ++
Sbjct: 69 N-TCNRVVIINNAGSFIITDNEP--IISVVSRDEFDNYLLSNALEKGADYVNDRIIGINN 125
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSI-NAGDYDYAIAFQ 229
++ G + VI ADG NS +AKS+ N + A+AF
Sbjct: 126 GNDYVSV--------------TGMNNSYIGKYVIAADGVNSIIAKSLGNNIRRNNAMAFM 171
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDH-VAVGTGTV---THKGDIKKF 285
+ + ++ M G Y WVFP+ D+ VG G++ +K + K+
Sbjct: 172 TIARGSYHNDLCIIDMTRMKWG-------YSWVFPRGDNEYDVGIGSIRWANYKTQLIKY 224
Query: 286 --QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYF 343
+ R A V HPIP PR +S R+AL+GDA G+ +GEGI++
Sbjct: 225 VHDIGLREGA-----------VLGHPIPIKPRENIISKRIALIGDAGGFADPTTGEGIFY 273
Query: 344 AAKSGRMCAEAI 355
A SG + A A+
Sbjct: 274 AMYSGALAALAL 285
>gi|330507596|ref|YP_004384024.1| geranylgeranyl reductase [Methanosaeta concilii GP6]
gi|328928404|gb|AEB68206.1| geranylgeranyl reductase [Methanosaeta concilii GP6]
Length = 374
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 142/319 (44%), Gaps = 38/319 (11%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDL--PLDIID 109
+ V+G GPAG AA A G++ ++E+ K KPCGGA+ DL P + +
Sbjct: 4 LVVVGAGPAGSTAARIAAGMGLKVLILEKEKFPRYKPCGGALSERATSWLDLRLPEAVCE 63
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
+ +T ++ V +K + ++ R D +L ++A + GASV
Sbjct: 64 KAITGARIHYHEWVQ----DKVKAYRLSTLINRSAFDQFLLQKAIETGASV--------- 110
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN--AGDYDYAIA 227
+F + VL Y+ + + + +I A G + I+ A D +
Sbjct: 111 ---SFSR--VLNYSSKEDHVSVQTDDQIYRSRFLIVASGCQDSLRSRISGKASRDDIGVC 165
Query: 228 FQERVKIPDEKM-VYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT----HKGDI 282
++ D + + +++ G ++ YGW+FP + +VG G + H I
Sbjct: 166 LVTEIEADDRDIEARLGSFLDIHFG--IAGGGYGWIFPHRGYYSVGIGGLASQLRHPRMI 223
Query: 283 KKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSGEGI 341
K L +D+I+ G H IP+ + +R+S GRV L GDAA V SGEGI
Sbjct: 224 MKGFLENNGFDRDQIIHG-------HTIPQGGKKKRISLGRVLLTGDAASLVDSFSGEGI 276
Query: 342 YFAAKSGRMCAEAIIEGSE 360
Y+A +SG M A AI E E
Sbjct: 277 YYALRSGEMAARAIGEEKE 295
>gi|189346653|ref|YP_001943182.1| geranylgeranyl reductase [Chlorobium limicola DSM 245]
gi|189340800|gb|ACD90203.1| geranylgeranyl reductase [Chlorobium limicola DSM 245]
Length = 389
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 148/333 (44%), Gaps = 65/333 (19%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERKL-DNCKPCGGAIP----LCMVGEFDLPLDIID 109
V+G GP+G +AA T AKNG++ +I++ + K CGG + C + F + I
Sbjct: 9 VVGAGPSGSSAAYTFAKNGMDVCVIDKAIFPRDKLCGGLLTRRTKQCFLDVFGTGWEDIH 68
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIG---MVRREVLDAYLRERAEKNGASV-----I 161
+ S + GQ + E G R D L E+ GA V +
Sbjct: 69 ------ECWSNGALFFHKGQMINAIENYGELFFCNRRTFDHALLEKVMAKGADVVLGDRV 122
Query: 162 NGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGD 221
G+ + + R + R + +IGADG NS VA+++ +
Sbjct: 123 EGVDTTLKMCR-------------------LRSGREIRYRYLIGADGVNSVVARAVTSKG 163
Query: 222 YD---YAIAFQERVKIPDEKMVYYEN---LAEMYVGDDVSPDF-YGWVFPKCDHVAVGTG 274
+D YA A Q + PD ++ +N L E+Y G+ D+ YGWVFPK + +VG G
Sbjct: 164 FDRNRYAFAVQ--AETPD--VICRQNDMILPEIYFGE---VDWGYGWVFPKKNSYSVGIG 216
Query: 275 TVTHK-----GDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGD 328
+ K G ++F LA ++ L G H IP R + + +VGD
Sbjct: 217 ALCQKNGDVAGKFREFYLARNSQPCSVTLKG-------HYIPFGNFSRNAVAKDIVIVGD 269
Query: 329 AAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSEN 361
AAG V +GEGI +A +SG+ A+A+I S N
Sbjct: 270 AAGLVDPITGEGIAYAIESGQYAAQAVILASSN 302
>gi|73669114|ref|YP_305129.1| geranylgeranyl reductase [Methanosarcina barkeri str. Fusaro]
gi|72396276|gb|AAZ70549.1| geranylgeranyl reductase [Methanosarcina barkeri str. Fusaro]
Length = 374
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 141/317 (44%), Gaps = 42/317 (13%)
Query: 70 AKNGVETFLIERK-LDNCKPCGGAIPLCMVG--EFDLPLDIIDRKVTKMKMISPSNVAVD 126
K G++T L++++ KPCGG + + +F+LP DII+ VT ++I +
Sbjct: 21 GKLGMKTLLLDKEEFPRYKPCGGGLSEHAMSYLDFELPQDIIEWDVTGARIIFRDQLI-- 78
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
+ K H +V R D +L E+A++ V G K R E PY + E D
Sbjct: 79 --EVHKDHRVSALVSRNKFDNFLLEKAKETNIEVHTG--EKALCCR--EMPYCV---EVD 129
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDY--DYAIAFQERVKIPDEKMVYYEN 244
+G T + I A+GA+ V + D +Y I V + +M
Sbjct: 130 TRQG------TYQAKFAIIAEGAHGLVKTCVRPADNKEEYGICLVTEVPADEREM----- 178
Query: 245 LAEMYVGDDVSPDF------YGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKIL 298
E +GD V F YGW+FP + +VG G V D + A N K+
Sbjct: 179 --EKRLGDAVELHFGVAGGGYGWIFPHKTYYSVGIGGVVK--DFPHPKEAMLNFLKENGF 234
Query: 299 GGKIIRVEAHPIPEHPRPRRLSG-RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIE 357
G+ ++ H IP R++ G RV L GDAAGYV SGEG+ +A SG+ AEAI
Sbjct: 235 SGEY-KLHGHKIPWGGIKRKVVGSRVLLSGDAAGYVDAFSGEGLAYAICSGQFAAEAIAR 293
Query: 358 GSENGTRMIDEGDLRKY 374
G + DL KY
Sbjct: 294 VCLQGKNL---KDLSKY 307
>gi|282900573|ref|ZP_06308515.1| geranylgeranyl reductase [Cylindrospermopsis raciborskii CS-505]
gi|281194373|gb|EFA69328.1| geranylgeranyl reductase [Cylindrospermopsis raciborskii CS-505]
Length = 404
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 146/335 (43%), Gaps = 39/335 (11%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEF--DL-PL 105
N V V G GPAG AA AK G++ LIE+ L K CGG +P ++G DL P
Sbjct: 3 NYDVIVCGAGPAGTTAAWMAAKTGLKVALIEKYPLPRHKTCGGGMP-AVLGNLLPDLVPE 61
Query: 106 DIIDRKVTKM----KMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVI 161
++ +V M K P A++ + +P + MV+R V D L +A + GA +
Sbjct: 62 AVVACQVNYMRHTWKFDHPILGAINPPGS-EPELKLWMVQRSVFDNALARQAAQAGADLR 120
Query: 162 NGLFMK---MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN 218
+GL +K MD ++ + G G + VIGADGAN AK N
Sbjct: 121 DGLAVKSLEMD-----SHGVIVRARSFKSDSGIGGGEFVAYAPYVIGADGANGITAKIAN 175
Query: 219 AGDYDYAIAFQERVKIP-----DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGT 273
+ +A V+ P D ++ + G P+ YGW+FPK DH+ VG
Sbjct: 176 L-RRERTMALAMEVEYPYNWTQDHPKDLRPDVIHLEYG--AVPNGYGWIFPKEDHLNVGA 232
Query: 274 GTVTHKGDIKKFQLATRNRAKDKIL----------GGKIIRVEAHPIP---EHPRPRRLS 320
G + + R + + I ++IR HP+P +
Sbjct: 233 GLFRPDRRDCRSDHSIRAQLQQAICQYLDFMDISYNPELIRFHGHPLPIWDGREKCHTPD 292
Query: 321 GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
G++ L GDAAG + G+GI A KSG + AE +
Sbjct: 293 GKILLAGDAAGLINPFFGDGILHAVKSGMLAAECV 327
>gi|302036222|ref|YP_003796544.1| geranylgeranyl reductase family protein [Candidatus Nitrospira
defluvii]
gi|300604286|emb|CBK40618.1| Geranylgeranyl reductase family protein [Candidatus Nitrospira
defluvii]
Length = 402
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 162/363 (44%), Gaps = 46/363 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPLCMVGEFDLPLD----- 106
V ++G GPAG AA L + G+ ++ K CGG + D L+
Sbjct: 12 VIIVGMGPAGAVAAAALCREGLTVLGFDKDAHPRYKVCGGGLS----ARIDRLLEPGFKS 67
Query: 107 IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFM 166
++++ V ++ + + I ++ +P Y MV R+ D YL ++A GA + G
Sbjct: 68 VVEQTVNGVQFVYRGQDPLLI-ESSQPIAY--MVMRDRFDHYLVQQAIHAGAELRTG--- 121
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDY-A 225
V+ T+ G V ++ + VIGADGANS VA+ + Y A
Sbjct: 122 ----------EGVVEITQNSDRVGVVTQEGRYQSRMVIGADGANSLVARQLFPNRSLYRA 171
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKF 285
A + V++ + + +Y + + + V + YGW+FPK + ++VG G K +
Sbjct: 172 PALESEVRLGNSR--HYPSASTILVDVGAARQGYGWIFPKENGLSVGVGEFRRKSSGLRS 229
Query: 286 QLATRNRAKDKILGGKII-RVEAHPIPEHPRPRR----------LSGRVALVGDAAGYVT 334
R + + L G+ + R HPIP + +SGR ALVGDA V
Sbjct: 230 TF-DRFVSDARGLSGRTVPRPIGHPIPAYSDSEGGHREGIGSPFISGRAALVGDAGHLVD 288
Query: 335 KCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQK 394
GEGIY+A +SG++ A AI+ G R G L +Y ++ P +++ + +
Sbjct: 289 PLFGEGIYYAVRSGQLVASAIL-----GNRHDHRGSLAEYAAALEREILPDFRITARIAR 343
Query: 395 VFY 397
V Y
Sbjct: 344 VIY 346
>gi|343086683|ref|YP_004775978.1| geranylgeranyl reductase [Cyclobacterium marinum DSM 745]
gi|342355217|gb|AEL27747.1| geranylgeranyl reductase [Cyclobacterium marinum DSM 745]
Length = 380
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 145/333 (43%), Gaps = 54/333 (16%)
Query: 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPLDI 107
+ +A+IG GP+G AA AK G + +IE+ KL K CGG L G +LP I
Sbjct: 2 KEFDIAIIGSGPSGAMAAYHAAKKGKKVVIIEKEKLPRYKTCGGG--LVYRGRINLPFSI 59
Query: 108 ---IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVI--- 161
++++ ++++ + + +P I MV R+ D +L +A + GA +I
Sbjct: 60 EEVVEKEFYELEVFFEKSPHFFTAKRNEP--IISMVMRDSFDQFLVNKALEQGAHIIEQT 117
Query: 162 ---------NGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSR 212
NGL +K T GG ++ +IGADGA S+
Sbjct: 118 TMEGLVKSENGLLIK--------------------TSGG-----DIKCKYLIGADGALSQ 152
Query: 213 VAKSINAGDYDYAI-AFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAV 271
AK + I A + VK+P+ + V D PD Y W FPK H+++
Sbjct: 153 TAKFGGWKESRKLIPALEFEVKVPENDFIRLSKNVRFDV--DAVPDGYAWCFPKNGHLSL 210
Query: 272 GTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAH--PIPEHPRPRRLS-GRVALVGD 328
G T+ K I + K +I +I+ E H IP R S R+ L GD
Sbjct: 211 GVCTL-KKQRIDLKKYYKDYLKKLEI--KEILESEVHGFQIPVGQRKDVFSKDRIFLSGD 267
Query: 329 AAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSEN 361
AAG+ + EGI A SG + ++AI+ EN
Sbjct: 268 AAGFADPLTAEGISNAILSGELASKAIVNNFEN 300
>gi|397634872|gb|EJK71615.1| hypothetical protein THAOC_06924 [Thalassiosira oceanica]
Length = 160
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 39 AAKTSPKLTNRNLRVAVIGGGPAGGAAAETLAK-NGVETFLIERKLDNCKPCGGAIPLCM 97
A TS + +VAV+GGGP+G AAE A+ ++T L ERK+DN KPCGGAIPLCM
Sbjct: 27 APATSSSALSMKYKVAVVGGGPSGACAAEIFAQEKNIDTVLFERKMDNAKPCGGAIPLCM 86
Query: 98 VGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128
+GEFD+P +DRKV+ +S S + G
Sbjct: 87 IGEFDIPETTVDRKVSTSPSVSESRWCIKGG 117
>gi|147676713|ref|YP_001210928.1| dehydrogenases [Pelotomaculum thermopropionicum SI]
gi|146272810|dbj|BAF58559.1| dehydrogenases [Pelotomaculum thermopropionicum SI]
Length = 401
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 148/347 (42%), Gaps = 46/347 (13%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIER--KLDNCKPCGGAIPLCMVGEFDLPLDI 107
N V VIGGGPAG A +A G + E ++ C G + + +P +
Sbjct: 2 NYDVIVIGGGPAGCKTAGLIAGKGYRVLVAEEHPRIGTPVQCAGLVSPRTLKAAGMPDGV 61
Query: 108 IDRKVTKMKMISPSNVAVDIGQTLK---PHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
I ++ + + SP G+TL ++ R D L ERA+ GA ++ G+
Sbjct: 62 IINEIKGVYVHSPG------GETLAVRCKDAAAFVIDRAGFDRKLAERAQSAGAEILTGV 115
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINA---GD 221
K L + + ++ G + + VIGADGANSRVA+ INA G+
Sbjct: 116 --KAGLGKLLAEKIIVKLKSSRG-------ESSARARLVIGADGANSRVARRINAPRSGE 166
Query: 222 YDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFP---KCDHVAVGTGTVTH 278
A + ++K P+E M A +++G +++P ++GW+ P + +G V
Sbjct: 167 VVRMFAAEVQLKCPEEDM------AHIFLGREIAPGWFGWLIPVDGRRARAGIGVCGVDK 220
Query: 279 KGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSG 338
++LA R D K+I +P PR R+ LVGDAA SG
Sbjct: 221 HPREYFYRLAEARR--DIFKDMKVICYTGGAVPIGLPPRIYGDRILLVGDAACQTKPISG 278
Query: 339 EGIYFAAKSGRMCAEAIIEGSENGTRMIDEGD-----LRKYLEKWDK 380
G+Y + +CA+ T+ + D L +Y +W+K
Sbjct: 279 GGLYLGMRGAELCAKV-------ATKALSREDLSAERLSEYQRRWEK 318
>gi|119356887|ref|YP_911531.1| geranylgeranyl reductase [Chlorobium phaeobacteroides DSM 266]
gi|119354236|gb|ABL65107.1| geranylgeranyl reductase [Chlorobium phaeobacteroides DSM 266]
Length = 382
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 152/345 (44%), Gaps = 58/345 (16%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIP----LCMVGEFDLPLDIID 109
V+G GP+G +AA T AKNG++ ++++ K CGG + ++ FDL D +
Sbjct: 9 VVGAGPSGSSAAYTFAKNGIDVCVVDKAFFPRDKLCGGLLSKRTKKSVLDVFDLNWDDV- 67
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIG---MVRREVLDAYLRERAEKNGASVINGLFM 166
+ S + GQ + E G R D L + GA V++G
Sbjct: 68 -----YEYTSNGALFFYKGQQINMIENYGELYFCNRSTFDNTLLGLVKSKGADVVSG--D 120
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYD--- 223
K++ + +L + + +I ADG NS +A+++ + +D
Sbjct: 121 KVEFIDAASKTCLL------------SSGQQINYRYLIAADGVNSLIARNVTSKKFDKSK 168
Query: 224 YAIAFQERVKIPDEKMVYYEN---LAEMYVGDDVSPDF-YGWVFPKCDHVAVGTGTVTHK 279
YA A Q + ++ Y +N E+Y G+ D+ YGWVFPK + +VG G + K
Sbjct: 169 YAFAVQVEI----QRAGYSQNDIAKPEIYFGE---VDWGYGWVFPKKNSYSVGVGGLYSK 221
Query: 280 GD-----IKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYV 333
K+F LA + + L G H IP R + + + LVGDAAG V
Sbjct: 222 NSDVGKKFKEFCLARNRQPYSEPLKG-------HYIPFGNYARHVVAKDIILVGDAAGLV 274
Query: 334 TKCSGEGIYFAAKSGRMCAEAIIEG-SENGTRMIDEGDLRKYLEK 377
+GEGI A +SG A+A+I S N ++DE KY K
Sbjct: 275 DPVTGEGIAHAVESGHYAAQAVISALSGNNISLVDE--YEKYYSK 317
>gi|341581824|ref|YP_004762316.1| geranylgeranyl hydrogenase [Thermococcus sp. 4557]
gi|340809482|gb|AEK72639.1| geranylgeranyl hydrogenase [Thermococcus sp. 4557]
Length = 396
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 176/390 (45%), Gaps = 47/390 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLD--II 108
V V+G G AG A +AK+G LI++K + K C I + + ++D+P D I
Sbjct: 8 VVVVGAGIAGPIVARNVAKSGYSVLLIDKKSAIGTPKQCAEGISIKVFEKYDIPYDKRFI 67
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMK 167
+RK+ K+ SPS ++ ++ + G++ R+V D L A K GA V+
Sbjct: 68 NRKIYGAKLYSPSGYELE----MRYKDVSGVILERKVFDKMLAYYAAKAGADVL-ARTEA 122
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGV---GEKRTLEV--DAVIGADGANSRVAKSINAGDY 222
+D+ R DG G+ E T+E+ D ++ ADG S +A+ AG
Sbjct: 123 LDVIRK------------DGRIAGIKAKHEDETVEIHADIIVAADGVESTIAR--KAGIN 168
Query: 223 DYAIAFQERVKIPDEKMV--YYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVGTGTVTHK 279
YA + E ++ Y +L ++ G++V+P Y WVFPK D VG G +
Sbjct: 169 TYAPPHEFDSSYEYEMLIEGYDPDLIHLWFGNEVAPRGYVWVFPKDEDRANVGIGINSDN 228
Query: 280 GDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSG 338
K+ L R ++K+ KI+ V +P + L+ V +VGDAA V G
Sbjct: 229 PQTAKYYLDKWLR-ENKVPAKKILEVNVGVVPVGGFVKELAKDNVLVVGDAARQVNPMHG 287
Query: 339 EGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPT-----YKVLDVLQ 393
G+ A ++G + ++ I+ E + G LR Y +W W T KVL V +
Sbjct: 288 GGMAEAMEAGTIASKWIVRALEEE----NPGLLRNYTTEW----WETDGKRLQKVLKVRK 339
Query: 394 KVFYRSNPAREAFVEMCADEYVQKMTFDSY 423
S+ + F+++ + +K+ Y
Sbjct: 340 VTEKLSDEDLDLFIQILSGADAEKIAGGDY 369
>gi|432328378|ref|YP_007246522.1| geranylgeranyl reductase family protein [Aciduliprofundum sp.
MAR08-339]
gi|432135087|gb|AGB04356.1| geranylgeranyl reductase family protein [Aciduliprofundum sp.
MAR08-339]
Length = 395
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 152/353 (43%), Gaps = 45/353 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDL-PLD-II 108
V VIG GP G AA A++G+ L+E++ + P C I + E ++ P D I
Sbjct: 8 VLVIGAGPGGSMAARYAARHGLRVLLVEKRPEIGVPVRCAEGISRAWMDEVEIEPQDRWI 67
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMK 167
D + K+ SP +V + +G V RE D YL A K GA + +MK
Sbjct: 68 DAYMDGAKIYSPDEKSVVELTAEQAGNEVGFVLNREYFDKYLASLAAKEGAEI----WMK 123
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGV----GEKRTLEVDAVIGADGANSRVAKSINAG--- 220
P + E KG + GEK + VI ADG S+VA+
Sbjct: 124 --------SPAIEIIKEDGYIKGAIIRKFGEKVEVRAKIVIAADGFESQVARWAGLNTVL 175
Query: 221 -DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGT--- 275
+ D Q R+ D + EN ++G +P Y W+FPK A VG G
Sbjct: 176 RERDIVSCIQYRMTNIDIE----ENFTHFFIG-SCAPGGYVWIFPKGKKEANVGIGVALN 230
Query: 276 -VTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYV 333
+ H+G++KK+ + D + G +I++ + P P+++ + LVGDAA +
Sbjct: 231 KLKHRGEVKKY-MDEFIEKHDYLKKGSVIQIVTGAVSTCPVPKKIVDNGIMLVGDAARLI 289
Query: 334 TKCSGEGIYFAAKSGRMCAEAIIEGSENGTR--------MIDEGDLRKYLEKW 378
+G GI A SG+ E + +N +R M+ E RK+L W
Sbjct: 290 DPITGGGIANACISGKYAGEIAAKCIDNPSRECLEEYQNMVQEKWGRKHLRNW 342
>gi|386002848|ref|YP_005921147.1| geranylgeranyl reductase [Methanosaeta harundinacea 6Ac]
gi|357210904|gb|AET65524.1| Geranylgeranyl reductase [Methanosaeta harundinacea 6Ac]
Length = 373
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 145/322 (45%), Gaps = 46/322 (14%)
Query: 54 AVIGGGPAGGAAAETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPL-DIIDR 110
AV+G GPAG AA L++ G + LI+RK + K C + + EF+ + D I
Sbjct: 5 AVVGAGPAGSTAARFLSEMGHKVLLIDRKEVVGVPKQCAEGLFAACLPEFETAVGDFITG 64
Query: 111 KVTKMKMISPSNVAVDI-GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
KV ++++ P+ + + G+ L M+ R D +L AE GA V
Sbjct: 65 KVPYLEVVFPNRASYRVRGEVL-------MLDRPRFDQHLLRLAEGAGAEVA-------- 109
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEK--RTLEVDAVIGADGANSRVAKSINAGDYDYAIA 227
L R E E D G + + T+ +A++GADG SRVAKSI A + A
Sbjct: 110 LERKVE--------EIDPESGVLRLRGGETIRAEAIVGADGPASRVAKSIGARNRLLPAA 161
Query: 228 FQERVKIPDEKMVYYENLAEMYVGDDVSPDFYG-WVFPKCDHVAVGTGTVTHKGDIKKFQ 286
Q + P++ +Y + D+ + Y W+FPK + GT V G + +
Sbjct: 162 -QVEMTWPEDDAIY------AIIDRDLPSEPYSCWIFPKNER---GTANVGCFGTVPTLE 211
Query: 287 -LATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAA 345
++ R + G+I+ IP R GR L+GDA G +G G+Y AA
Sbjct: 212 AFISKYRIE-----GEIVEKNGGAIPLGVAERLQRGRAVLIGDAGGLTNPFTGGGLYPAA 266
Query: 346 KSGRMCAEAIIEGSENGTRMID 367
+S R+ AEAI TR I+
Sbjct: 267 RSARIAAEAIDRFLRGETRTIE 288
>gi|254167359|ref|ZP_04874211.1| hypothetical protein ABOONEI_2172 [Aciduliprofundum boonei T469]
gi|197623622|gb|EDY36185.1| hypothetical protein ABOONEI_2172 [Aciduliprofundum boonei T469]
Length = 395
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 169/391 (43%), Gaps = 40/391 (10%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDL-PLD-II 108
V VIG GP G AA A++G++ LIE++ + P C I + E ++ P + I
Sbjct: 8 VLVIGAGPGGSMAARYAARHGLKVLLIEKRPEIGVPVRCAEGISRAWMDEVEIEPQEKWI 67
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMK 167
D ++ K+ SP +V + +G V RE D YL A + GA +
Sbjct: 68 DAEIDGAKIYSPDEKSVIKLSAEQAGNEVGFVLNREYFDKYLASLAAQEGAEIW------ 121
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGV----GEKRTLEVDAVIGADGANSRVAKSINAG--- 220
+ P V E +G V GEK + VIGADG S+VA+
Sbjct: 122 ------LKSPAVEIIKEDGYVRGAVVRRFGEKVEVRAKIVIGADGFESQVARWAGLNTVL 175
Query: 221 -DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTH 278
+ D Q R+ D EN ++G +P Y W+FPK A VG G +
Sbjct: 176 REIDIVSCIQYRMTNID----IEENFTHFFIGS-CAPGGYVWIFPKGRKEANVGIGVALN 230
Query: 279 K----GDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYV 333
K G++KK+ + + + G II++ + P P+R+ + LVGDAA +
Sbjct: 231 KLKSKGEVKKY-MDDFIEKHEYLKKGSIIQIVTGAVSTCPVPKRIVDNGIMLVGDAARLI 289
Query: 334 TKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQ 393
+G GI A SG+ E + N ++ E K E+W+K + + V + L
Sbjct: 290 DPITGGGIANACISGKYAGEIAAKCINNPSKECLEEYQNKVKERWEKKHLRNWFVKEKLA 349
Query: 394 KVFYRSNPAREAFVEMCADEYVQKMTFDSYL 424
++ S+ +++ + E + +++ + L
Sbjct: 350 EL---SDDTLNKLMDVVSKEDISEISVRAIL 377
>gi|254428641|ref|ZP_05042348.1| FAD dependent oxidoreductase, putative [Alcanivorax sp. DG881]
gi|196194810|gb|EDX89769.1| FAD dependent oxidoreductase, putative [Alcanivorax sp. DG881]
Length = 362
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 119/285 (41%), Gaps = 22/285 (7%)
Query: 73 GVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLK 132
G+ +I R KPC G + V + + + R+ +S S+ V +
Sbjct: 26 GLRVAVISRPPSRGKPCAGGVTEKAVARYRFSIAPVVREAVTSLAVSHSSSPVRHLSSAT 85
Query: 133 PHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGV 192
P + M R LDA+ R +AE GA +F + EQ D +
Sbjct: 86 P--FCVMTERAELDAFCRGQAEYQGA-----VFHETAGLTGLEQ-------WADCVRIET 131
Query: 193 GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGD 252
E +I ADGANS VA+ + G+ A A +P E + N M +
Sbjct: 132 REGAVFSAPWLIAADGANSAVARLL--GERHPAGAMAIEGCVPRESV---RNYPPMTLDF 186
Query: 253 DVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPE 312
V YGW+FPK DHV VG H Q +T R LG + V +P+
Sbjct: 187 GVIRGGYGWLFPKGDHVNVGLYVWRHGAAAP--QRSTLQRYCQARLGAEAKHVAGYPLGT 244
Query: 313 H-PRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAII 356
P R +GRV VGDAAG GEGIY A SG++ A+AI+
Sbjct: 245 WLPHTRLANGRVLFVGDAAGCTEVLLGEGIYGAVLSGQLAAQAIL 289
>gi|408375660|ref|ZP_11173320.1| hypothetical protein A11A3_16135 [Alcanivorax hongdengensis A-11-3]
gi|407764492|gb|EKF72969.1| hypothetical protein A11A3_16135 [Alcanivorax hongdengensis A-11-3]
Length = 373
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 126/293 (43%), Gaps = 30/293 (10%)
Query: 69 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMIS---PSNVAV 125
LA++G++ ++ R KPC G + + + + + + R+ + P VA+
Sbjct: 22 LARSGLQVLVLHRPGRRAKPCAGGLTMKTLQRYRFDIGPVIRERIDTLHVGGSRPGRVAL 81
Query: 126 DIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEY 185
P + M R LDAY E+A + GA V +K +
Sbjct: 82 S-----APSLFCVMTERGELDAYCLEQAREQGAQVAAVTGLKA------------VTQNH 124
Query: 186 DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENL 245
G + R ++ ADGANS VA+ + + A+A + V P + + +
Sbjct: 125 HGVTVTDSQGRRYAGRYLLAADGANSSVARLLGLPRHAGAMAIEGLV--PRQAL---SDW 179
Query: 246 AEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHK-GDIKKFQLATRNRAKDKILGGKIIR 304
M + D P YGW+FPK DHV VG H+ G + L R + LG +
Sbjct: 180 PGMTLDFDALPGGYGWLFPKGDHVNVGLYIWQHRLGGADRPALDAYCR---RTLGCTPDQ 236
Query: 305 VEAHPIPEH-PRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAII 356
V +P+ P+ R GR+ VGDAAG GEGIY A SG+ A+A++
Sbjct: 237 VAGYPLGTWLPQGRLSQGRILFVGDAAGCTESLLGEGIYGAVLSGQWAAQALL 289
>gi|254166845|ref|ZP_04873699.1| hypothetical protein ABOONEI_1937 [Aciduliprofundum boonei T469]
gi|289596255|ref|YP_003482951.1| geranylgeranyl reductase [Aciduliprofundum boonei T469]
gi|197624455|gb|EDY37016.1| hypothetical protein ABOONEI_1937 [Aciduliprofundum boonei T469]
gi|289534042|gb|ADD08389.1| geranylgeranyl reductase [Aciduliprofundum boonei T469]
Length = 395
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 170/393 (43%), Gaps = 44/393 (11%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDL-PLD-II 108
V VIG GP G AA A++G++ LIE++ + P C I + E ++ P + I
Sbjct: 8 VLVIGAGPGGSMAARYAARHGLKVLLIEKRPEIGVPVRCAEGISRAWMDEVEIEPQEKWI 67
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMK 167
D ++ K+ SP +V + +G V RE D YL A + GA +
Sbjct: 68 DAEIDGAKIYSPDEKSVIKLSAEQAGNEVGFVLNREYFDKYLASLAAQEGAEIW------ 121
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGV----GEKRTLEVDAVIGADGANSRVAKSINAG--- 220
+ P V E +G + GEK + VIGADG S+VA+
Sbjct: 122 ------LKSPAVEIIKEDGYVRGAIVRRFGEKVEVRAKIVIGADGFESQVARWAGLNTVL 175
Query: 221 -DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTH 278
+ D Q R+ D EN ++G +P Y W+FPK A VG G +
Sbjct: 176 RERDIVSCIQYRMTNID----IEENFTHFFIGS-CAPGGYVWIFPKGRKEANVGIGVALN 230
Query: 279 K----GDIKKF--QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAG 331
K G++KK+ ++ +K G II++ + P P+R+ + LVGDAA
Sbjct: 231 KLKSKGEVKKYMDDFIEKHEYLNK---GSIIQIVTGAVSTCPVPKRIVDNGIMLVGDAAR 287
Query: 332 YVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDV 391
+ +G GI A SG+ E + N ++ E K E+W+K + + V +
Sbjct: 288 LIDPITGGGIANACISGKYAGEIAAKCINNPSKECLEEYQNKVKERWEKKHLRNWFVKEK 347
Query: 392 LQKVFYRSNPAREAFVEMCADEYVQKMTFDSYL 424
L ++ S+ +++ + E + +++ + L
Sbjct: 348 LAEL---SDDTLNKLMDVVSKEDISEISVRAIL 377
>gi|327401916|ref|YP_004342755.1| digeranylgeranylglycerophospholipid reductase [Archaeoglobus
veneficus SNP6]
gi|327317424|gb|AEA48040.1| Digeranylgeranylglycerophospholipid reductase [Archaeoglobus
veneficus SNP6]
Length = 389
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 156/364 (42%), Gaps = 38/364 (10%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEF-DLPLDIID 109
V VIG GP G AA+T A+ G+ L+E++ + P C + + F D+ I
Sbjct: 4 VVVIGAGPGGSIAAKTAAEKGLSVLLVEKRQEIGTPVRCAEGVSKEAIARFVDIDKKWIA 63
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVI-----NGL 164
+V ++ SP + + + + +E ++ R+V D +L A K GA VI G+
Sbjct: 64 AEVVGARIYSPDGTEIVMAEEMAGNEVGYVLERKVFDRHLARLAAKAGADVIVKTTATGI 123
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK------SIN 218
K D +GE+ +++ VIGADG SRV K ++
Sbjct: 124 KRKEDGTVEVSLRR-------------MGEEYSVDTKIVIGADGVESRVGKWAGIDTTLK 170
Query: 219 AGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVT 277
+ + + + D + Y+ ++G++++P Y W+FPK + A VG G +
Sbjct: 171 LSEIESCVQYLMTGIDFDPEYCYF------WLGNEIAPGGYIWLFPKGEDAANVGIGVLP 224
Query: 278 HKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAGYVTKC 336
K + + K+ GG+I+ V A +P + P ++ V LVGDAA +
Sbjct: 225 SLAK-KSPKEYLDSFIKEHFDGGEIVEVVAGGVPVKGPVETAVADNVMLVGDAARHADPI 283
Query: 337 SGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVF 396
+G GI A + G E E G LRKY E W + T +LQ+
Sbjct: 284 TGGGIANAMRGGYFAGCVAAEAVEKGD--YSAKFLRKYDELWKNDFGKTLHRNKILQQKL 341
Query: 397 YRSN 400
+ +
Sbjct: 342 LKMD 345
>gi|110834110|ref|YP_692969.1| hypothetical protein ABO_1249 [Alcanivorax borkumensis SK2]
gi|110647221|emb|CAL16697.1| hypothetical protein ABO_1249 [Alcanivorax borkumensis SK2]
Length = 362
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 124/292 (42%), Gaps = 34/292 (11%)
Query: 73 GVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLK 132
G+ +I R KPC G + + + + + R+ + ++ S+ + I
Sbjct: 26 GLRVVVISRAQPRAKPCAGGVTEKTLARYRFSIASVVRET--VSTLAVSHTSSPIRHLSA 83
Query: 133 PHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGV 192
+ M R LDA R AE+ GA +F R+ Q E +G
Sbjct: 84 QARFCVMTERSELDALCRANAEQQGA-----VFCDTAGLRSLHQ-------EANGVSVQT 131
Query: 193 GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGD 252
E + ++ ADGANS VA+ + A+A + +P + + Y M +
Sbjct: 132 REGQRFTAPWLVAADGANSAVARMLGERHLRGAMAIEG--CVPRKNIRDYP---PMTLDF 186
Query: 253 DVSPDFYGWVFPKCDHVAVGTGTVTH------KGDIKKFQLATRNRAKDKILGGKIIRVE 306
YGW+FPK DHV VG H + ++++ LA LG + +V
Sbjct: 187 GAIRGGYGWLFPKGDHVNVGLYVWRHGVAAPERSALQRYSLAR--------LGAQAEQVA 238
Query: 307 AHPIPEH-PRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIE 357
+P+ P R ++GRV VGDAAG GEGIY A SG+M A+A++
Sbjct: 239 GYPLGTWLPNTRLVNGRVLFVGDAAGCTEALLGEGIYGAVLSGQMAAQALLS 290
>gi|304316209|ref|YP_003851354.1| geranylgeranyl reductase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433654373|ref|YP_007298081.1| geranylgeranyl reductase family protein [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|302777711|gb|ADL68270.1| geranylgeranyl reductase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433292562|gb|AGB18384.1| geranylgeranyl reductase family protein [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 387
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 148/328 (45%), Gaps = 40/328 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAI-PLCMVGEFDLPL-DIID 109
V +IGGGPAG A L+ G + LIE+ + K CGG I P C DL + D ++
Sbjct: 4 VIIIGGGPAGSTLARRLSAQGYKALLIEKFTMPRYKACGGGITPRCY-KMLDLDISDYVE 62
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
K+ P+N +V + +T KP Y V R D YL ++A ++G V +G +D
Sbjct: 63 DTTYKIAFKFPNNKSV-VLETEKPIIY--QVDRTKFDKYLIDKAVESGCDVHDGEKF-LD 118
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
R+ ++ V T G + R L +GADG NS VA N + + IA
Sbjct: 119 FYRDGKEVVV-------KTDRGQYKTRIL-----VGADGINSTVAYKANLLNGEKGIAL- 165
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDF------YGWVFPKCDHVAVGTGTVTHKGDIK 283
E VY + V +V DF YGWVFPK D +++G GT K
Sbjct: 166 -------EAEVYVDKCDIEKVRGEVVVDFNAIKYGYGWVFPKKDRLSIGVGTFLSKTSKI 218
Query: 284 KFQLATRNRAKDKILGG-KIIRVEAHPI--PEHPRPRRLSGRVALVGDAAGYVTKCSGEG 340
K L+ N + ++G + ++ H + P + +V L+GDA +GEG
Sbjct: 219 KENLS--NMIDENVVGNVEECKIYGHQLSFPNGKDGTYNNDKVILIGDATRLADPFTGEG 276
Query: 341 IYFAAKSGRMCAEAIIEGSENGTRMIDE 368
IY A + + + +IE NG + E
Sbjct: 277 IYNAILTANISFD-VIEKYFNGKCELSE 303
>gi|307595627|ref|YP_003901944.1| geranylgeranyl reductase [Vulcanisaeta distributa DSM 14429]
gi|307550828|gb|ADN50893.1| geranylgeranyl reductase [Vulcanisaeta distributa DSM 14429]
Length = 380
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 140/307 (45%), Gaps = 38/307 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAI---PLCMVGEFDLPLDII 108
V VIG GP+G AA AK G+ +++R + KPCGG + + ++ + L+ +
Sbjct: 7 VIVIGAGPSGSMAAYVAAKLGLRVLILDRFRFPRIKPCGGGLTQKSVALLKGLGIELNSV 66
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
R K ++I +N + P I +V R+ D YL A + GA + + +
Sbjct: 67 VRDTCK-RVIIVNNAGSFLLMDNDP--IISIVSRDEFDNYLLSSALEMGADYLVDRIVGV 123
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSI-NAGDYDYAIA 227
D+ + EY +G T VI ADGANS +A+ + N A+A
Sbjct: 124 DV-----------HGEY---VNAIGMNDTYVSKYVIAADGANSVIARQLGNDIRRGTAMA 169
Query: 228 FQERVKIPDEKMVYYENLAEMYVGDDVSPDF-YGWVFPKCD-HVAVGTGTVTHKGDIKKF 285
F + + L ++ V D + Y WVFP+ D VG G++ GD +
Sbjct: 170 FMT--------IAHGNYLNDVCVIDMTRIKWGYSWVFPRGDGEYDVGIGSI-RWGD---Y 217
Query: 286 QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAA 345
+ D +G + V HPIP R R +S R+ALVGDAAG +GEGI++A
Sbjct: 218 RTQLIKYVSD--VGLREGEVRGHPIPIKARDRIVSKRIALVGDAAGLADPTTGEGIFYAM 275
Query: 346 KSGRMCA 352
SG + A
Sbjct: 276 YSGALAA 282
>gi|256809996|ref|YP_003127365.1| geranylgeranyl reductase [Methanocaldococcus fervens AG86]
gi|256793196|gb|ACV23865.1| geranylgeranyl reductase [Methanocaldococcus fervens AG86]
Length = 392
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 152/330 (46%), Gaps = 40/330 (12%)
Query: 70 AKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDL-PLDIIDRKVTKMKMI-SPSNVAV 125
AKNG +T LIE+ + +P C AIP + EF + P R V K ++ SPS V
Sbjct: 27 AKNGAKTLLIEKSQEIGEPVRCAEAIP--SIEEFGIKPTPEFVRSVVKGGILFSPSGKKV 84
Query: 126 DIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEY 185
+ Q K YI V R++ D YL RA K GA V + L R+ + V+ E+
Sbjct: 85 TVTQD-KAQGYI--VERKIFDKYLAIRAAKEGAKVAVKT-AAIGLERDGDYWNVI--VEF 138
Query: 186 DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKI---PDEKMVYY 242
+GE+ ++ VI ADG S +A +Y A ++ ++I + +MV
Sbjct: 139 ------LGEEYAIKTKVVIAADGVESNIA------EYAGLEAKKKPLEICSCAEYEMVNV 186
Query: 243 E----NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKF--QLATRNRAKDK 296
E N+ E Y G++V+P Y W+FPK + VG G K + + AKD+
Sbjct: 187 ELLDKNMMEFYFGNEVAPGGYVWIFPKGETANVGLGVRDRKKKAIDYLEEFIENGLAKDR 246
Query: 297 ILGGKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
+ + + P P + + + +VGDAAG ++ +G GIY A G M E
Sbjct: 247 LKNATPVEFKVGGAPVSGPIEKTYTDGLLVVGDAAGQISPLTGGGIYLAMDCGLMAGEV- 305
Query: 356 IEGSENGTRMID--EGDLRKYLEKWDKTYW 383
+ ++ D E L++Y +W + ++
Sbjct: 306 ---ASKAVKLNDWSEDVLKEYENRWKEKHY 332
>gi|15605704|ref|NP_213081.1| hypothetical protein aq_121 [Aquifex aeolicus VF5]
gi|2982862|gb|AAC06483.1| hypothetical protein aq_121 [Aquifex aeolicus VF5]
Length = 342
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 137/314 (43%), Gaps = 34/314 (10%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFD--LPLDII 108
VA++G GP G A LAK GV LI+ + + P C +P+ + EF P + I
Sbjct: 5 VAIVGAGPGGSTCAYVLAKKGVRVLLIDSRKEVGYPVQCAEFVPVQLSYEFPEFFPEETI 64
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
+KV M +P G+ + + ++ RE D + + AEK GA L K
Sbjct: 65 AQKVKDMVHYTPW------GEIVSMYSEGFILHREKWDKGIAKLAEKEGAH----LRTKT 114
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
FE Y++ D K E ++ D V+GADGA S VAK ++ I
Sbjct: 115 KF-IGFEGKYLILK---DLNKR---EVFKVKADIVVGADGARSLVAKLTGEHTKEFLITA 167
Query: 229 QERVKIP---DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGT-VTHKGDIKK 284
Q +K+ ++ ++++ D P YGW+FPK + VG G +++ ++ +
Sbjct: 168 QYTLKLKKPLNDLLIFFR---------DYIPGGYGWIFPKQELANVGVGVDLSYGVNVVE 218
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
KD + I IP G V LVGDA G+ +G GI A
Sbjct: 219 VLNKFVKEVKDFVEPEPIYGRTGGFIPGEGIKNPFRGNVLLVGDAGGFCHPITGGGIANA 278
Query: 345 AKSGRMCAEAIIEG 358
+G + A AI+EG
Sbjct: 279 VITGSIAARAILEG 292
>gi|374708607|ref|ZP_09713041.1| dehydrogenases [Sporolactobacillus inulinus CASD]
Length = 387
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 156/356 (43%), Gaps = 35/356 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLDI---I 108
V ++G GP G + A LA+ G+ ++E++ K CGG + + +P+DI I
Sbjct: 8 VIIVGAGPGGSSLAAKLAEVGLHVLILEKQSFPRYKVCGGGVTKRAL--LKMPIDITPII 65
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
++T + + ++ DI + +I MV R+ LD L + A GA +
Sbjct: 66 RDQITSLITVEGNH---DIQEFKHKTPFIYMVMRDELDQLLAKHAVDCGAELK------- 115
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN-AGDYDYAIA 227
E +V EY G ++GADG NS VAK + + A+A
Sbjct: 116 ------EDSFVKRVVEYGGRVDVFTRDEKYSGRYLVGADGVNSIVAKQVGLMSERRKALA 169
Query: 228 FQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT-HKGDIKKFQ 286
+ + Y+N ++ + PD Y W+FPK ++ G G+ + + + K+
Sbjct: 170 LEYEFRCDQATNAKYKN--KVIIDYTRVPDGYIWIFPKNGILSAGIGSYSLSQKLMSKYL 227
Query: 287 LATRNRAKDKILGGKIIRVEAHPIPEH-PRPRRLSGRVALVGDAAGYVTKCSGEGIYFAA 345
L+ + + + G ++ + + R ++ R AL+GDAAG V +GEGIY+A
Sbjct: 228 LSFLDHQE---MSGDLLSAKGSFLSAGGTRQPIMTQRTALIGDAAGLVDSFAGEGIYYAL 284
Query: 346 KSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNP 401
S + ++ +I+ + E L Y D T P LD + FY+ NP
Sbjct: 285 WSAELLSDHLIKSIRD---RYSEAFL-TYQRDVDLTIMPELSTLDQFGRKFYK-NP 335
>gi|268323320|emb|CBH36908.1| conserved hypothetical protein, geranylgeranyl reductase family
[uncultured archaeon]
Length = 412
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 169/366 (46%), Gaps = 50/366 (13%)
Query: 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPC--GGAIPLCMVGEFDLPLD 106
+N V + GGGPAG +AA A+N +T L+E P GA + +F+L
Sbjct: 3 KNFDVIIAGGGPAGLSAAIIAARNKCDTLLVESSKAFGYPIHDSGATFSEAIKDFNLSKG 62
Query: 107 IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMV--RREVLDAYLRERAEKNGASVINGL 164
+I ++ + ++SP V + K E IG + RRE L+ L + A G
Sbjct: 63 VITNRIDGVTIVSPKGYVV----STKLGEGIGYILERRE-LNRELAKIAANEG------- 110
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVD-------AVIGADGANSRVAKS- 216
+++ +P P + +G G+ K + D VI A G N+ +AK+
Sbjct: 111 -VEIKMPVKAVSPIL-----SNGFVAGLQTKELIGGDNIEYKSKLVIDATGVNAVIAKAV 164
Query: 217 -INAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTG 274
I+ G + A ++ + ++ N E+Y G ++P YGW+FPK D VA VG G
Sbjct: 165 GIHPGMSNIRWAIGAEYEMTNVEL-DNPNFIELYFGSQIAPSGYGWIFPKGDGVANVGVG 223
Query: 275 TVTHKGD--IKKFQLATRNRAKDKILGGKIIRVEAHPIPEH-------PRPRRL-SGRVA 324
+TH + I F+ +R + + K+ A P+ H P ++ S +
Sbjct: 224 -ITHISNERINPFKYLSRFIKEYPVTSKKL--KNAQPLEYHVGILPIGPMFDQIVSDGLM 280
Query: 325 LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEG-SENGTRMIDEGDLRKYLEKWDKTYW 383
+VGDAA V+ GEGI F K+G + E ++ ++N T + +L +Y ++ K +
Sbjct: 281 IVGDAACQVSPHLGEGIRFVMKAGEIAGEVAVDAINKNNT---SKNNLTQYEKQVKKEIY 337
Query: 384 PTYKVL 389
P Y++L
Sbjct: 338 PNYRLL 343
>gi|20089576|ref|NP_615651.1| geranylgeranyl reductase [Methanosarcina acetivorans C2A]
gi|19914492|gb|AAM04131.1| geranylgeranyl reductase [Methanosarcina acetivorans C2A]
Length = 389
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 148/343 (43%), Gaps = 46/343 (13%)
Query: 70 AKNGVETFLIERK-LDNCKPCGGAIPLCMVG--EFDLPLDIIDRKVTKMKMISPSNVAVD 126
K G+ T L+E++ KPCGG + + +F+LP DII+ +VT ++ ++
Sbjct: 36 GKLGLNTLLLEKEEFPRYKPCGGGLSKHAISYLDFELPQDIIEWEVTGARVSFREHII-- 93
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
+ K H MV R+V D L E+A+++GA V G + + E P + T
Sbjct: 94 --EVHKDHCLSVMVSRDVFDNLLLEKAKESGAEVHTG----ERVSQCMETPECVEVTT-- 145
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKSINA--GDYDYAIAFQERVKIPDEKMVYYEN 244
EK T + I A+GAN + S+ D D + V +E+M
Sbjct: 146 -------EKGTYQARFAIIAEGANGLLKTSVRPVDSDEDCGVCVVTEVPAGEEEM----- 193
Query: 245 LAEMYVGDDVSPDF------YGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKIL 298
E +G V F YGW FP + +VG G G IK +
Sbjct: 194 --EKRIGKTVYMRFGVAGGGYGWFFPHRTYYSVGIG-----GLIKDLPHPRETMLEFLRC 246
Query: 299 GGKI--IRVEAHPIPEHPRPRRLSG-RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
G +++ H IP RR++G R+ L GDAAG+V GEG+ +A SG+ AE I
Sbjct: 247 NGFTGDYKLKGHKIPLGGVKRRVTGSRILLSGDAAGFVDAFLGEGLAYAISSGQFAAEVI 306
Query: 356 IEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398
+ ++ DL+KY + P K + ++ +R
Sbjct: 307 AGICQCNGKI---KDLKKYEYLCQAEFGPHLKYSLMFSRIMHR 346
>gi|410030224|ref|ZP_11280054.1| geranylgeranyl reductase [Marinilabilia sp. AK2]
Length = 380
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 167/393 (42%), Gaps = 47/393 (11%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLDIIDRKVT 113
++G GP+GG AA LAK G + ++E++ L K CGG L G LP D+ +
Sbjct: 8 IVGSGPSGGMAAYGLAKAGFKVAIVEKESLPRYKTCGGG--LVFRGREMLPFDLGNSIEM 65
Query: 114 KMKMISPSNVAVDIG-QTLKPHEYIGMVRREVLDAYLRERAEKNGASVIN-GLFMKMDLP 171
+ + I ++ + + I MV R+ LD + A +GA ++ + K+D
Sbjct: 66 EYRKIHVYFEHLENALASSRDFPIISMVMRDKLDQLIIMEAVNSGALLLERHVLQKLD-- 123
Query: 172 RNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAI-AFQE 230
F + ++ +T+ ++ L+ V+ ADGA AK + I A +
Sbjct: 124 --FHEENIILHTD----------QQILKTKYVVAADGALGPTAKLAGWPETRKLIPALEY 171
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATR 290
V++ + A + D P+ Y W FPK H+++G T KK ++ R
Sbjct: 172 EVEVSETDFKRLSQEARFDI--DAIPNGYAWCFPKAKHLSIGVAT------FKKSRINLR 223
Query: 291 N---RAKDKILGGKIIRVEAH--PIPEHPRPRRL-SGRVALVGDAAGYVTKCSGEGIYFA 344
+ R +K+ +I +AH IP R L +V LVGDAAG + EGI
Sbjct: 224 DYYQRYLNKLGLHHVIFEQAHGFQIPVGFRTDGLVKNKVFLVGDAAGLADPLTAEGITNG 283
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAR- 403
SG M +AI E E+ E R YL ++ P + +L + FY R
Sbjct: 284 IHSGVMAGKAIGENFEH-----PEIAERAYLSALEERILPELRFTTLLSRFFYFYPKVRN 338
Query: 404 -------EAFVEMCADEYVQKMTFDSYLYKRVV 429
+ F E+ D + K+ L ++ +
Sbjct: 339 YLIKKEGQKFCEILTDLFTGKIVLSKELKQKAI 371
>gi|288818121|ref|YP_003432469.1| geranylgeranyl reductase [Hydrogenobacter thermophilus TK-6]
gi|384128885|ref|YP_005511498.1| geranylgeranyl reductase [Hydrogenobacter thermophilus TK-6]
gi|288787521|dbj|BAI69268.1| geranylgeranyl reductase [Hydrogenobacter thermophilus TK-6]
gi|308751722|gb|ADO45205.1| geranylgeranyl reductase [Hydrogenobacter thermophilus TK-6]
Length = 371
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 34/310 (10%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPLDIIDRK 111
+ V+GGGPAG + A +KNG++ L+E+ K+ K C G + + LP
Sbjct: 4 LVVVGGGPAGSSCAYHASKNGLKVLLLEKHKVPRFKLCAGCLSKRISSH--LPDGWEKLV 61
Query: 112 VTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLP 171
+ ++K + + + + +V R DA+L E+A++ G V+
Sbjct: 62 LNRIKGGVLGYAGREDFELMNDQDIAYIVDRAEFDAFLLEKAQEEGVEVL---------- 111
Query: 172 RNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQER 231
++ VL G V K + D ++GADG S VAK A+ +++
Sbjct: 112 ---QECEVLSIEANSGKCKVVTSKGSFYGDFLVGADGFYSTVAK---------ALGYKKS 159
Query: 232 VKIPDEKMVYYENLAEMYVGD-DVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATR 290
+ + +L E + D Y WVFPK D ++VG GD+ K
Sbjct: 160 KFFKSLEFFTFGDLVEKVIIDIGWVKRGYAWVFPKGDRLSVGI-ACREGGDLSKNLFEYA 218
Query: 291 NRAKDKILGGKIIRVEAHPIPEHPRPRRL---SGRVALVGDAAGYVTKCSGEGIYFAAKS 347
KI G RV IP R R + +GRV LVGDAA GEGIY+A S
Sbjct: 219 KTRGIKIDG----RVYGWHIPYMERERDVFYGAGRVLLVGDAANLTDPLLGEGIYYAVLS 274
Query: 348 GRMCAEAIIE 357
G++ +AI E
Sbjct: 275 GKLAVQAIAE 284
>gi|159041758|ref|YP_001541010.1| geranylgeranyl reductase [Caldivirga maquilingensis IC-167]
gi|157920593|gb|ABW02020.1| geranylgeranyl reductase [Caldivirga maquilingensis IC-167]
Length = 362
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 160/395 (40%), Gaps = 66/395 (16%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGA-----IPLCMVGEFDLPLDII 108
+IG GPAG AAA ++ GV +I++ K KPCGG I L + DL ++I
Sbjct: 6 IIGSGPAGNAAALVASRLGVRALIIDKSKHPRVKPCGGGLTPKTIALSRILGLDLS-EVI 64
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHE-YIGMVRREVLDAYLRERAEKNGASVINGLFMK 167
+ + ++ +++ + V ++ E I + RRE LD ++ A NG +N ++
Sbjct: 65 EHECGEVLVVTHAGSFV-----MRFKEPMIRVSRRERLDEFMFNEAVNNGVEYVNDEVLR 119
Query: 168 M-DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAI 226
+ + P E +G E VIGADGA SRV +SI
Sbjct: 120 VRETPSKVEV---------------IGRSSVYEAKWVIGADGAPSRVGRSIGV------- 157
Query: 227 AFQERVKIPDEKMVYYENLAE----MYVGDDVSPDF------YGWVFPKCD-HVAVGTGT 275
+P V N+A + GD DF Y W+FP VG G+
Sbjct: 158 -------MPRSNAVALMNIASGNPIINTGDACILDFTRIKWGYAWLFPLSHGEYDVGLGS 210
Query: 276 VTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTK 335
KG L+ N LG K R+ H IP P + RV L GDA G
Sbjct: 211 AL-KGRYSNLLLSYVNE-----LGLKPGRLIGHLIPYRPPNSASTRRVMLTGDALGLADP 264
Query: 336 CSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYK-VLDVLQK 394
+GEGI+ A SG + A ++ S N T D + YL D Y T V+ L
Sbjct: 265 VTGEGIFQAMMSGALAALSL--RSSNATEYYDS-IITSYLR--DNQYALTVAYVVYGLDS 319
Query: 395 VFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVV 429
F F E A ++K+T Y+ V
Sbjct: 320 QFLSRFLKITGFSEPGAVRIIEKVTGGKLTYRDAV 354
>gi|374851365|dbj|BAL54327.1| geranylgeranyl reductase [uncultured Aquificae bacterium]
Length = 371
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 135/310 (43%), Gaps = 34/310 (10%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPLDIIDRK 111
+ V+GGGPAG + A +KNG++ L+E+ K+ K C G + + + +
Sbjct: 4 LVVVGGGPAGSSCAYHASKNGLKVLLLEKHKVPRFKLCAGCLSKRISSHLPDGWEKLVLN 63
Query: 112 VTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLP 171
+ ++ S+ + + L E +V R DA+L E+A++ G V+
Sbjct: 64 RIRGGVLGYSDK--ESFELLTDREIAYIVDRAEFDAFLLEKAQEEGVEVL---------- 111
Query: 172 RNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQER 231
++ VL G + K + D ++GADG S VA+ A+ +++
Sbjct: 112 ---QECEVLSIEANSGKCKVITSKGSFYADFLVGADGFYSTVAR---------ALGYKKS 159
Query: 232 VKIPDEKMVYYENLAEMYVGD-DVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATR 290
+ + +L E + D Y WVFPK D ++VG GD+ K
Sbjct: 160 KFFKSLEFFTFGDLVEKVIIDIGWVKRGYAWVFPKGDRLSVGI-ACREGGDLSKTLFEYA 218
Query: 291 NRAKDKILGGKIIRVEAHPIPEHPRPRRL---SGRVALVGDAAGYVTKCSGEGIYFAAKS 347
KI G RV IP R R + +GRV LVGDAA GEGIY+A S
Sbjct: 219 KTRGIKIDG----RVYGWHIPFVERERDVFYGAGRVLLVGDAANLTDPLLGEGIYYAVLS 274
Query: 348 GRMCAEAIIE 357
G++ +AI E
Sbjct: 275 GKLAVQAIAE 284
>gi|270158160|ref|ZP_06186817.1| geranylgeranyl reductase family protein [Legionella longbeachae
D-4968]
gi|289163581|ref|YP_003453719.1| electron transfer oxidoreductase [Legionella longbeachae NSW150]
gi|269990185|gb|EEZ96439.1| geranylgeranyl reductase family protein [Legionella longbeachae
D-4968]
gi|288856754|emb|CBJ10565.1| putative electron transfer oxidoreductase [Legionella longbeachae
NSW150]
Length = 503
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 156/365 (42%), Gaps = 79/365 (21%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIE-RKLDNCKPCGGAIP------LCMVGEFDLPL 105
V + G GP+G A LA+ G + LI+ K CG + L +G DLP
Sbjct: 28 VLIAGAGPSGAICAYYLAQAGKKVILIDSHSFPRDKVCGDFVSPVSLKELMTLGITDLP- 86
Query: 106 DIIDRKVTKMKMISPSNVAVDIGQTLKPHE---------YIGMVRREVLDAYLRERAEKN 156
+ K T M I+ + V VD GQ L Y ++ R +LD ++ A++
Sbjct: 87 ---EFKATNM--ITEATVYVD-GQKLITDNIPQIKDFVNYGRVIPRVLLDTWIVNAAKQQ 140
Query: 157 GASVI------NGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGAN 210
G +VI N + D+ EQ G+KR + ++GADG+N
Sbjct: 141 GVNVITDCKLVNYFVNEQDVRVECEQH---------------GKKRRFLIKILVGADGSN 185
Query: 211 SRVAKSINAGDYDYAIAFQERVKIPDEKMV----YYENL------AEMYVGDDVSPDFYG 260
S VA+ + Q + P K+V Y EN+ A ++ + P ++
Sbjct: 186 STVARIL-----------QGKKPNPKHKIVAVRAYCENINCIPHQATLFFTRNTFPGYF- 233
Query: 261 WVFPKCDHVA-VGTGTVT-----HKGDIKKFQLATRNR---AKDKILGG-KIIRVEAHPI 310
W FP A VG G V ++ ++K L K KI G +I ++ P+
Sbjct: 234 WFFPTSSTTANVGIGMVLKTFPKNETNLKAMLLEMIGNDPFFKTKISQGMQITKIAGWPL 293
Query: 311 PEH-PRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEG 369
+ P + RV L GDAAG++ +GEGI +A +SGR+ AE II E T G
Sbjct: 294 SCYDPSTINVKDRVLLTGDAAGFINPFTGEGIQYALQSGRLAAETIIGSFE--TENFSAG 351
Query: 370 DLRKY 374
L+++
Sbjct: 352 SLKRF 356
>gi|57641023|ref|YP_183501.1| geranylgeranyl hydrogenase [Thermococcus kodakarensis KOD1]
gi|74502850|sp|Q5JE27.1|GGR_PYRKO RecName: Full=Digeranylgeranylglycerophospholipid reductase;
Short=DGGGPL reductase; AltName:
Full=2,3-di-O-geranylgeranylglyceryl phosphate
reductase; AltName: Full=Geranylgeranyl reductase;
Short=GGR
gi|57159347|dbj|BAD85277.1| geranylgeranyl hydrogenase [Thermococcus kodakarensis KOD1]
Length = 395
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 175/390 (44%), Gaps = 47/390 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLD--II 108
V V+G G AG A +AK G LI++K + K C AI + + ++D+P D I
Sbjct: 7 VVVVGSGIAGPIVARNVAKAGFSVLLIDKKWAIGTPKQCAEAISIKVFDKYDIPYDKRFI 66
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMK 167
+R++ K+ SPS ++ ++ E G++ R+V D L A K GA V+
Sbjct: 67 NREIYGAKLYSPSGYELE----MRYKEVSGVILERKVFDKMLAYYAAKAGADVL-ARTEA 121
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLE-----VDAVIGADGANSRVAKSINAGDY 222
+D+ R DG G+ K E D ++ ADG S +A+ AG
Sbjct: 122 LDVIRK------------DGKIVGIKAKHEDEPVEIYADIIVAADGVESTIAR--KAGIN 167
Query: 223 DYAIAFQERVKIPDEKMV--YYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVGTGTVTHK 279
YA + E ++ + +L ++ G++V+P Y WVFPK D VG G +
Sbjct: 168 TYAPPHEFDSGYEYEMLIEGFDPDLIHLWFGNEVAPRGYVWVFPKDEDRANVGIGINSDN 227
Query: 280 GDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSG 338
K+ L + ++ I K++ + IP + L+ V +VGDAA V G
Sbjct: 228 PKTAKYYL-DKWLEENNIPAKKLLEINVGLIPVGGFVKELAKDNVVVVGDAARQVNPMHG 286
Query: 339 EGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPT-----YKVLDVLQ 393
G+ A ++G + ++ I+ + ++E +L L+ + K +W T KVL V +
Sbjct: 287 GGMAEAMEAGTIASKWIV-------KALEEENL-SLLQNYTKEWWETDGKRLEKVLKVRR 338
Query: 394 KVFYRSNPAREAFVEMCADEYVQKMTFDSY 423
++ + F+++ + +K+ Y
Sbjct: 339 VTEKLTDEDLDLFIQILSGADAEKIASGDY 368
>gi|206901307|ref|YP_002250581.1| FAD dependent oxidoreductase [Dictyoglomus thermophilum H-6-12]
gi|206740410|gb|ACI19468.1| FAD dependent oxidoreductase, putative [Dictyoglomus thermophilum
H-6-12]
Length = 396
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 132/312 (42%), Gaps = 30/312 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDIIDR 110
+ ++GGGP G A KN ++T +IE +P C G + + EF LP + I
Sbjct: 5 LVIVGGGPVGSFAGYLAGKNNIKTLIIEEHSKIGEPLHCLGKLSIHAFEEFPLPKESIRN 64
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+ P+ + + ++ KP YI + R + D + E A KNG +++
Sbjct: 65 SLKGGYFFFPNGNFIKLKKS-KPDSYI--LDRSLFDKNMAELAGKNGCTLL--------- 112
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEK---RTLEVDAVIGADGANSRVAKSINAGDYDYAIA 227
+ E + T+ + EK R +E +I A+GA + AK + Y ++
Sbjct: 113 ---LSAKAIGIEIENEATRLIIEEKNRRRKIEAKVIINAEGAKRQFAKRLGLKPNPYLVS 169
Query: 228 FQERV---KIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKK 284
Q V ++ D++ V E+Y+G S F+ WV P + +G ++
Sbjct: 170 LQYEVIGLELLDKECV------EVYLGSTYSKGFFLWVSPYGNLTKIGVAVQPNENPKIF 223
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAGYVTKCSGEGIYF 343
N K + G +II+ IP P + +VGDAAGY +G GIYF
Sbjct: 224 LDKFLNNLKKTRNSGIEIIKSYGGIIPILGPYEEYYYPNILIVGDAAGYNKSTTGGGIYF 283
Query: 344 AAKSGRMCAEAI 355
+ ++ E +
Sbjct: 284 GLQGAQIAIEQV 295
>gi|376006932|ref|ZP_09784139.1| Geranylgeranyl reductase [Arthrospira sp. PCC 8005]
gi|375324673|emb|CCE19892.1| Geranylgeranyl reductase [Arthrospira sp. PCC 8005]
Length = 378
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 145/347 (41%), Gaps = 28/347 (8%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLD-IIDRKV 112
++G GPAG AA LAK G +I++ L KPCGG + + FD I K
Sbjct: 7 IVGSGPAGATAAYHLAKKGHSILVIDKAILPRYKPCGGGVSPIVQDWFDFDFSPAISLKT 66
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPR 172
+ + +++ + P I MVRREV D ++ ++A GA+V + + L
Sbjct: 67 VMVYYTWNKSEPIEVELKINP---IWMVRREVFDYFILKQAISKGATVRDNTEV---LGI 120
Query: 173 NFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERV 232
F+ L T D G R L IGADGA +AK + +A +
Sbjct: 121 EFQSDRWLVKTPEDTYTG-----RYL-----IGADGAKGPLAKWLGFTKQKKLVAGALEL 170
Query: 233 KIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNR 292
+IP K V + E + + YGW FPK D ++G G + + + F+ +
Sbjct: 171 EIPTSKPVDMKTYFEFGLVNSG----YGWNFPKADGYSLGAGAFSKQRKAQNFKRILEDY 226
Query: 293 AKDKILGGKIIRVEAHPIPEHPRPRRLSGRVA-LVGDAAGYVTKCSGEGIYFAAKSGRMC 351
A L HPI ++L + A L G+AA V + EGI + SG
Sbjct: 227 ATFFHLNLDNATECGHPISLWDGKQKLHTQNAVLAGEAACVVDPFTAEGIRPSIFSGLKA 286
Query: 352 AEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398
AEAI N D L KY E ++ + L ++FYR
Sbjct: 287 AEAI-----NQALGGDINALDKYTEVMNEEWGNQMMFAQKLAQIFYR 328
>gi|209527074|ref|ZP_03275589.1| geranylgeranyl reductase [Arthrospira maxima CS-328]
gi|423064198|ref|ZP_17052988.1| geranylgeranyl reductase [Arthrospira platensis C1]
gi|209492502|gb|EDZ92842.1| geranylgeranyl reductase [Arthrospira maxima CS-328]
gi|406713441|gb|EKD08609.1| geranylgeranyl reductase [Arthrospira platensis C1]
Length = 378
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 145/347 (41%), Gaps = 28/347 (8%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLD-IIDRKV 112
++G GPAG AA LAK G +I++ L KPCGG + + FD I K
Sbjct: 7 IVGSGPAGATAAYHLAKKGHSILVIDKAILPRYKPCGGGVSPIVQDWFDFDFSPAISLKT 66
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPR 172
+ + +++ + P I MVRREV D ++ ++A GA+V + + L
Sbjct: 67 VMVYYTWNKSEPIEVELKINP---IWMVRREVFDYFILKQAISKGATVRDNTEV---LGI 120
Query: 173 NFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERV 232
F+ L T D G R L IGADGA +AK + +A +
Sbjct: 121 EFQSDRWLVKTPEDTYTG-----RYL-----IGADGAKGPLAKWLGFTKQKKLVAGALEL 170
Query: 233 KIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNR 292
+IP K V + E + + YGW FPK D ++G G + + + F+ +
Sbjct: 171 EIPTSKPVDMKTYFEFGLVNSG----YGWNFPKADGYSLGAGAFSKQRKAQNFKRILEDY 226
Query: 293 AKDKILGGKIIRVEAHPIPEHPRPRRLSGRVA-LVGDAAGYVTKCSGEGIYFAAKSGRMC 351
A L HPI ++L + A L G+AA V + EGI + SG
Sbjct: 227 ATFFNLNLDNATECGHPISLWDGQQKLHTQNAVLAGEAACVVDPFTAEGIRPSIFSGLKA 286
Query: 352 AEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398
AEAI N D L KY E ++ + L ++FYR
Sbjct: 287 AEAI-----NQALGGDINALDKYTEVMNEEWGNQMMFAQKLAQIFYR 328
>gi|320106130|ref|YP_004181720.1| geranylgeranyl reductase [Terriglobus saanensis SP1PR4]
gi|319924651|gb|ADV81726.1| geranylgeranyl reductase [Terriglobus saanensis SP1PR4]
Length = 394
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 142/324 (43%), Gaps = 29/324 (8%)
Query: 39 AAKTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCM 97
A K +LT R V V+G GPAG +AA L +G L+++ K C G + +
Sbjct: 2 AGKMQSELT-RWWDVIVVGAGPAGCSAAYDLVLSGRRVLLLDKNDFPRSKACAGGLTMKT 60
Query: 98 VGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNG 157
V ++ + R++ + + N + + + P ++ M R D Y ++ ++ G
Sbjct: 61 VQALRYSVEPVTRQLIRHVSLESKNKKSPLLEGVYP--FVVMTVRSEFDDYCFKKTKELG 118
Query: 158 ASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADGANSRVAK- 215
A F+++ + +Q DG V E TL+ VIGADGANS V +
Sbjct: 119 AD-----FLRIRGIKRIKQ---------DGKGVTVETETETLQAKFVIGADGANSVVRQF 164
Query: 216 SINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGT 275
+ A + ++ + E ++ + D W+FPK DH+ VG
Sbjct: 165 CTDLASVKKGFALEAQLPMQSETRTVTIDVGAV-------KDGAAWIFPKGDHLNVGLYV 217
Query: 276 VTHKGDI-KKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYV 333
+ + + +K L R + G+I V + + R + GRV L GDAAG
Sbjct: 218 INEEEHLSRKLLLDYIRRKFGSEIEGQISHVVGQYLNSYGWEGRCAQGRVLLAGDAAGLT 277
Query: 334 TKCSGEGIYFAAKSGRMCAEAIIE 357
+GEGIY A SG++ A+AI E
Sbjct: 278 DVMTGEGIYSAVLSGQIAAQAIEE 301
>gi|298674236|ref|YP_003725986.1| geranylgeranyl reductase [Methanohalobium evestigatum Z-7303]
gi|298287224|gb|ADI73190.1| geranylgeranyl reductase [Methanohalobium evestigatum Z-7303]
Length = 410
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 154/352 (43%), Gaps = 51/352 (14%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDI--- 107
V V+G GP G AA+T AKNG++ LIE++ + P C I G+ L I
Sbjct: 7 VIVVGAGPGGSIAAKTAAKNGLDVLLIEKRQEIGDPVRCAEGI-----GKEGLKHHIEPD 61
Query: 108 ---IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVI--- 161
I V ++ SP+ V++ + L E ++ R++ D L +A G V+
Sbjct: 62 PKWICADVKGSRIYSPNETVVEMSEELSGGEVGYVLERKIFDRELVNQAASYGVDVMVKT 121
Query: 162 --NGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK---- 215
GL + R + Y +GE+ + VIGADG S++ +
Sbjct: 122 RATGLISENGYVRGIKAIY-------------LGEEYNFYSNIVIGADGVESKIGRWGGI 168
Query: 216 SINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTG 274
+ D + Q + D + N Y+G++++P Y WVFPK + +A VG G
Sbjct: 169 DTSLKPSDIEVCAQYLIGNIDTDL----NFCHFYLGNEIAPSGYIWVFPKGEKLANVGIG 224
Query: 275 TV-THKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAGY 332
+ + G + L + + K K GKI+ ++ +P + ++ + LVGDAA
Sbjct: 225 ILGSRSGKYRAIDLLS-DFVKQKFPEGKILELDVGGVPVSGTIDQTIADGLMLVGDAARQ 283
Query: 333 VTKCSGEGIYFAAKSGRMC---AEAIIEGSENGTRMIDEGDLRKYLEKWDKT 381
+G G+ A +G + A I ++ T+M L++Y +W KT
Sbjct: 284 SDPITGGGLVNAMDAGEIAGNVAYEAISANDVSTKM-----LQRYESRWRKT 330
>gi|296108998|ref|YP_003615947.1| geranylgeranyl reductase [methanocaldococcus infernus ME]
gi|295433812|gb|ADG12983.1| geranylgeranyl reductase [Methanocaldococcus infernus ME]
Length = 391
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 173/411 (42%), Gaps = 45/411 (10%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDIIDR 110
+ V+G GP G +A +K G +T L+E+ + +P C AIP +L I
Sbjct: 10 IIVVGAGPGGSCSAYASSKLGAKTLLVEKSQEIGEPVRCAEAIPGLENLGIELDSSFIRS 69
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V + +PS + + ++ K Y+ V R++ D YL RA GA V + + L
Sbjct: 70 EVNGGYIFTPSGRKILV-ESDKAKGYV--VERKIFDKYLAIRAANAGAKVAVKSNV-VGL 125
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
R+ ++ L EY +GE + VI ADG S +A+ + E
Sbjct: 126 ERDGDE--WLVEIEY------LGEIYKVRSKIVIAADGVESNIAEYAGLKSKKKPL---E 174
Query: 231 RVKIPDEKMVYYE----NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKK-- 284
+ +MV E N E Y G++++ Y W+FPK D VG G K
Sbjct: 175 VCSCAEFEMVNVELIDKNKLEFYFGNEIAKGGYAWIFPKGDAANVGLGVRDKKKKAINYL 234
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAGYVTKCSGEGIYF 343
+ +D++ I ++ P P + + + +VGDAAG ++ +G GIY
Sbjct: 235 YDFLENELVRDRLKNATPIELKVGGAPVSGPIEKTYTDGLLVVGDAAGQISPLTGGGIYL 294
Query: 344 AAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAR 403
A G + E E +N + E L+ Y E+W + Y+ ++ + YR
Sbjct: 295 AMDCGLIAGEVAGEAIKN--KDWSEEFLKTYEERWKEKYYNM-----LMNHLKYRK---- 343
Query: 404 EAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALR 454
+E +D+ ++++ V G LED+ L L+R L+
Sbjct: 344 --VLEKLSDDEIEELA--------EVIGEKLEDIDLKKFAKKILMRPKLLK 384
>gi|431798264|ref|YP_007225168.1| geranylgeranyl reductase [Echinicola vietnamensis DSM 17526]
gi|430789029|gb|AGA79158.1| geranylgeranyl reductase family protein [Echinicola vietnamensis
DSM 17526]
Length = 377
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 174/404 (43%), Gaps = 45/404 (11%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLDI---I 108
VA+IG GPAG +AA LA+ G+ T LIE++ L K CGG G LP DI +
Sbjct: 6 VAIIGSGPAGASAAYRLAEQGISTVLIEKETLPRYKTCGGG--FVYRGRRRLPYDISEVV 63
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
+R+ ++ + + + P I MV R+ D+++ ++A++ G V +G +
Sbjct: 64 EREFKQISLYFEDEAMMLTTKRDVP--VISMVMRDDFDSFIIKKAKEKGVLVKDGHKLT- 120
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDY---A 225
F VL+ + D ++ +I ADGA S AK + A
Sbjct: 121 --GITFGDVPVLHTDQGD-----------VQAKMIIAADGALSPTAKMAGWKETRTLIPA 167
Query: 226 IAFQERVKIPDEKMVYYENLA-EMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKK 284
+ ++ V D +E L+ E+ D P Y W FPK +H+++G + +
Sbjct: 168 LEYEVEVNAAD-----FERLSKEVRFDVDTIPYGYAWSFPKENHLSLGVASARK----VR 218
Query: 285 FQLATRNRAKDKILG-GKIIRVEAH--PIPEHPRPRRL-SGRVALVGDAAGYVTKCSGEG 340
L R LG ++I +AH IP PR +V L+GDAAG+ + EG
Sbjct: 219 IDLKAHYRNYLTKLGITEVISEKAHGFQIPVAPRTDGFYRNKVFLIGDAAGFADPITAEG 278
Query: 341 IYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSN 400
I A SG M A++ N D+ + ++ + V K FY
Sbjct: 279 ISNALLSGEMVVSAMV----NANLDPDKAGALYESKLEEELLPEILTGVKV-SKWFYSQR 333
Query: 401 PAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTI 444
R ++ D ++ MT D ++ +R P + ++ LK V +
Sbjct: 334 KIRNFLMKRYGDYFISAMT-DVFIGERSYPKDLMKSLKRKVREL 376
>gi|404492992|ref|YP_006717098.1| oxidoreductase, geranylgeranyl reductase family [Pelobacter
carbinolicus DSM 2380]
gi|77545061|gb|ABA88623.1| oxidoreductase, geranylgeranyl reductase family [Pelobacter
carbinolicus DSM 2380]
Length = 384
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 166/380 (43%), Gaps = 43/380 (11%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPLDIIDRK 111
VAV+GGGPAG AA LAK G++ ++++ + K CGG + L E LP+
Sbjct: 8 VAVVGGGPAGTMAAIGLAKRGIDVCILDKAEHPRYKVCGGGL-LHRAAE-RLPI-----S 60
Query: 112 VTKMKMISPSNVAVDIGQ------TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
++ NV ++ G + + MV R LDA L E A + GA ++G
Sbjct: 61 PEPFTEVACRNVELNFGGRQEGFVVRRDFPVVRMVMRADLDAALWEEAGRCGAHCLSGPK 120
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
+ DL + + VL T+ GE R V+GADG NS VA+ A
Sbjct: 121 V-CDLETSSDS--VLLKTDR-------GEVRA---RFVVGADGVNSVVARRGGWSPSPLA 167
Query: 226 IAFQE-RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGT----VTHKG 280
IA E + + D + + A + D Y W+FPK +H++VG + V+ KG
Sbjct: 168 IAALECELAVDDGTYGRFCDAARFDI--DHPRRGYSWIFPKKNHLSVGLCSMVRPVSGKG 225
Query: 281 DIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGE 339
F +N+ I+ + + A IP PR +L+ + + L GDAAG + E
Sbjct: 226 LRADFHAYLKNQG---IVPKEPGEIHAALIPVFPRLGQLADKGILLTGDAAGLADPLTAE 282
Query: 340 GIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRS 399
G+ A +SGR+ A AI EG M E Y +K + +V L + Y
Sbjct: 283 GLTAALESGRLAAGAIAEGE-----MKREKVQAIYRQKLAEGLLADIEVSRKLAVLLYHH 337
Query: 400 NPAREAFVEMCADEYVQKMT 419
R +V+KMT
Sbjct: 338 PHLRNLIFRFYGQAFVEKMT 357
>gi|163781547|ref|ZP_02176547.1| hypothetical protein HG1285_01653 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882767|gb|EDP76271.1| hypothetical protein HG1285_01653 [Hydrogenivirga sp. 128-5-R1-1]
Length = 387
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 138/316 (43%), Gaps = 46/316 (14%)
Query: 54 AVIGGGPAGGAAAETLAKNGVETFLIE-RKLDNCKPCGGAI-----PLCMVGEFDLPLDI 107
V+GGGPAG ++A L++ G++ L+E RKL K C G + PL G L+
Sbjct: 13 VVVGGGPAGASSARFLSEKGLKVLLLEKRKLPRFKLCAGCLSVRITPLLPTGWESEVLNT 72
Query: 108 IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK 167
I + + + +P YI + R D +L + A ++GA +
Sbjct: 73 I-----RGGYLGFRGEKFHHKTSGEPVAYI--IDRASFDHFLVKSAVESGADL------- 118
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIA 227
+E+ L + E D T +K +E D +IGADG ++V K +
Sbjct: 119 ------WEETEFLSF-EGDRTLRVRTDKGAVETDLLIGADGFYTKVGKQL---------G 162
Query: 228 FQERVKIPDEKMVYYENLAEMYVGD-DVSPDFYGWVFPKCDHVAVGTGTVTHKG--DIKK 284
+Q+R + +L E V D + YGW+FPK D V+VG T + D+ K
Sbjct: 163 YQKRKFFRSVEFWTEGDLGEEVVIDIGIVKRGYGWIFPKGDKVSVGLATTGRENTLDVLK 222
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS---GRVALVGDAAGYVTKCSGEGI 341
+ K K + G V+ IP P GRV LVGD+A V GEGI
Sbjct: 223 DYVKRHELLKSKEVKG----VKGWMIPYLTSPSEAQLGKGRVMLVGDSANLVDPLLGEGI 278
Query: 342 YFAAKSGRMCAEAIIE 357
Y+ G++ AE+I +
Sbjct: 279 YYGVLGGKLLAESITQ 294
>gi|195953182|ref|YP_002121472.1| geranylgeranyl reductase [Hydrogenobaculum sp. Y04AAS1]
gi|195932794|gb|ACG57494.1| geranylgeranyl reductase [Hydrogenobaculum sp. Y04AAS1]
Length = 348
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 137/315 (43%), Gaps = 38/315 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIP-LCMVGEF-DLPLDII 108
V +IGGG AG +AA LAK GV+ +++ + P C IP M +F D + +
Sbjct: 9 VLIIGGGLAGSSAAHQLAKKGVDVIIVDSRKTIGVPVQCAEFIPKQLMQKKFEDYFKNSV 68
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
+++ M I P N V G MV R+V DA + + A K+GA F+K
Sbjct: 69 VQEIENMLTIEPDNKKVYSGSKGV------MVDRKVFDANIFQEAIKSGARA----FLK- 117
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
++ +Y + + +E D ++GADG S V + + + ++ A+
Sbjct: 118 -------TIFIGFYDKNTAILKAKDDVYYVEFDYIVGADGPRSSVMEKVFSKKHELAVCA 170
Query: 229 QERVK----IPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKK 284
Q R K + D +V+ E + YGW+FPK ++ VG G T D K
Sbjct: 171 QRRCKLKEPLKDIVIVFREYIKGG----------YGWIFPKNNYANVGIGIDTAFKDDPK 220
Query: 285 F--QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIY 342
+ +L ++ + +P +S VAL GDA G+ +G GI
Sbjct: 221 YVLELFIKDAVSMGFIENNCDESSGGFLPLDGIDTLVSSNVALCGDAGGFCHPITGGGIP 280
Query: 343 FAAKSGRMCAEAIIE 357
A SG M A+ I+E
Sbjct: 281 QAVVSGNMLAQYILE 295
>gi|409095791|ref|ZP_11215815.1| geranylgeranyl hydrogenase [Thermococcus zilligii AN1]
Length = 393
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 153/340 (45%), Gaps = 38/340 (11%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLD--II 108
V V+G G AG A +AK G LI++K + + K C I + + ++D+P D I
Sbjct: 5 VVVVGAGIAGPIVARNVAKAGYSVLLIDKKPAIGSPKQCAEGISIKVFDKYDIPYDRRYI 64
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMK 167
+R++ ++ SPS ++ L+ +E G++ R+V D L A K GA V+
Sbjct: 65 NREIYGARIYSPSGYELE----LRYNEVSGVILERKVFDKMLAYYAAKAGADVL-ARTEA 119
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLE-----VDAVIGADGANSRVAKSINAGDY 222
+D+ R DG G+ K E D ++ ADG S VA+ AG
Sbjct: 120 LDVIRK------------DGKVAGIKAKHEDEPVEIYADIIVAADGVESTVAR--KAGIN 165
Query: 223 DYAIAFQERVKIPDEKMV--YYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVGTGTVTHK 279
YA + E ++ + +L ++ G++V+P Y WVFPK D VG G +
Sbjct: 166 TYAPPHEFDSSYEYEMLIEGFDPDLIHLWFGNEVAPRGYVWVFPKDEDRANVGIGIASDH 225
Query: 280 GDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVTKCSG 338
K+ L + ++ I KI+ V +P + L V +VGDAA V G
Sbjct: 226 PQTAKYYL-DKWLKENNIPMKKILEVNVGLVPVGGFVKELVKENVLVVGDAARQVNPMHG 284
Query: 339 EGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKW 378
G+ A ++G + ++ I++ E + L+ Y +W
Sbjct: 285 GGMAEAMEAGTIASKWIVKALEEENLSL----LQNYTAEW 320
>gi|428771698|ref|YP_007163488.1| geranylgeranyl reductase [Cyanobacterium aponinum PCC 10605]
gi|428685977|gb|AFZ55444.1| geranylgeranyl reductase [Cyanobacterium aponinum PCC 10605]
Length = 373
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 130/306 (42%), Gaps = 27/306 (8%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDL---PLDIIDR 110
V+G GPAG +A LAK G ++E+ L KPCGG + + FD P +
Sbjct: 6 VVGAGPAGATSAYHLAKKGYSVLILEKASLPRYKPCGGGVSPLIQSWFDFDLSPAISLKS 65
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+AVD+G P I MVRR+V D +L +A K GA++ + ++
Sbjct: 66 HTVYCTWEQKDAIAVDLGNN--P---IWMVRRDVFDYFLVTQAVKQGATLKDTTKVR--- 117
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
F + TE + KG R L IGADGA +AK + G ++
Sbjct: 118 GVEFVSNGWIVKTENESFKG-----RYL-----IGADGAKGSMAKWLGFGKQKKSVVGAL 167
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATR 290
++IP +K+ EN E Y+ + Y W FPK D ++G G + F
Sbjct: 168 ELEIPVQKV---EN-KETYLEFGLVQHGYAWNFPKADGYSIGAGGFAKNRKAQSFHKIIE 223
Query: 291 NRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVA-LVGDAAGYVTKCSGEGIYFAAKSGR 349
N L K HP+ ++L A L G++A V + EGI + SG
Sbjct: 224 NYTGLFNLNAKDGCEHGHPLALWNGVQKLHTENAVLAGESACVVDPFTAEGIRPSIYSGL 283
Query: 350 MCAEAI 355
+EA+
Sbjct: 284 KASEAV 289
>gi|393796878|ref|ZP_10380242.1| geranylgeranyl reductase [Candidatus Nitrosoarchaeum limnia BG20]
Length = 405
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 154/349 (44%), Gaps = 43/349 (12%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLDI 107
N + V+GGGPAG + A AKNG++ L+E++ + G + + EF +P D
Sbjct: 6 NYDLVVVGGGPAGSSVAYEAAKNGIKVALLEKEETIAYSVRTSGVTWIESIKEFGIPDDC 65
Query: 108 IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK 167
+ + SP+N V I T+ PH + VR+ +L ++AEK+GA + F+K
Sbjct: 66 YN-PIKNYSFCSPNN-EVTITDTI-PHAAVLDVRKTY--RWLAQQAEKHGADI----FLK 116
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGV-GEKRTLEV----DAVIGADGANSRVAKSINAGDY 222
++ + DG GV G + EV VI A G +S V+KS+
Sbjct: 117 TNIKDVIKNK--------DGDIAGVSGTSKEGEVIFHSKVVIDASGFSSVVSKSMG---- 164
Query: 223 DYAIAFQERVKIPDEKMVYYENLAE----MYVGDDVSPDFYGWVFPKCDH---VAVGTGT 275
+ ER E V EN+ E + VG SP Y W+FP ++ + VG G
Sbjct: 165 --FVTQWERFGAGAEYEVKAENVDEETWWLMVGQKYSPAGYAWIFPVGNNIVRIGVGVGK 222
Query: 276 VTHKGD-IKKFQLATRNRAKDKILGGKIIRVEAH--PIPEHPRPRR-LSGRVALVGDAAG 331
D ++ + ++ GKI +E H IP R+ + + LVGD+AG
Sbjct: 223 PESAVDPTERLKELIDSKTGPISKLGKITPIEFHYGLIPNDGLTRKTVYNNLILVGDSAG 282
Query: 332 YVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDK 380
EGI +A K GR+ + E + G DE L Y E W K
Sbjct: 283 QANPLVLEGIRYAIKFGRIAGKIASEAIKFGKT--DEDALYAYEENWKK 329
>gi|389851695|ref|YP_006353929.1| 43 kDa subunit bacteriochlorophyll synthase-like protein
[Pyrococcus sp. ST04]
gi|388249001|gb|AFK21854.1| putative 43 kDa subunit bacteriochlorophyll synthase-like protein
[Pyrococcus sp. ST04]
Length = 393
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 173/382 (45%), Gaps = 29/382 (7%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLD--II 108
V V+G G AG A +AK G L+++K + K C I + + EFD+P D I
Sbjct: 5 VIVVGSGVAGPIVARNVAKAGFSVLLVDKKPAIGTPKQCAEGINVNVFKEFDIPYDKRFI 64
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMK 167
+R++ ++ SPS + L+ E G++ R+V D L A K GA V+ +
Sbjct: 65 NREIYGARIYSPSGYTAE----LRYKEVSGVILERKVFDKMLAYYAAKEGAEVLARTEVV 120
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIA 227
L RN + V E GE +E + ++ ADG S VA+ AG YA
Sbjct: 121 DVLKRNGKIVGVKAKHE--------GEPIEIEAEIIVAADGVESTVARK--AGINTYAPP 170
Query: 228 FQERVKIPDEKMV--YYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVGTGTVTHKGDIKK 284
+ E ++ Y +L ++ G++++P Y WVFPK D VG G + K
Sbjct: 171 HEFDSAYEYEMLIEGYDPDLIHLWFGNEIAPRGYVWVFPKDEDRANVGIGINSDNEKTAK 230
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVTKCSGEGIYF 343
+ L + ++ I +I+ + +P + L V +VGDAA V G G+Y
Sbjct: 231 YYL-DKWLKENNIPRNRILEINVGLVPVGGFVKELVKDNVLVVGDAARQVNPVHGGGMYE 289
Query: 344 AAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR-SNPA 402
A K+ + ++ I+ E + L+ Y ++W +T P + L L++ + ++
Sbjct: 290 AMKASTIASKWIVRALEEENVEL----LKNYTKEWWETEGPKMEKLLRLRRAMEKLTDED 345
Query: 403 REAFVEMCADEYVQKMTFDSYL 424
+ FV++ ++K+ +Y
Sbjct: 346 IDVFVQLLGGTDLEKLASGNYF 367
>gi|333896438|ref|YP_004470312.1| geranylgeranyl reductase [Thermoanaerobacterium xylanolyticum
LX-11]
gi|333111703|gb|AEF16640.1| geranylgeranyl reductase [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 385
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 150/355 (42%), Gaps = 36/355 (10%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLDIIDRK 111
V ++GGGPAG L+K G + LIE+ K CGG I D+ +
Sbjct: 4 VIIVGGGPAGSTLGRKLSKEGYKVLLIEKHVFPRYKACGGGITKRCYKLLDIDISQCVED 63
Query: 112 VTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLP 171
+T + N QT +P Y V R D YL ++A +G + +G
Sbjct: 64 ITNEIIFRFPNDRTIALQTGEPIIY--QVDRTKFDKYLIDKAAYHGCEIYDG-------- 113
Query: 172 RNFEQPYVLYYTEYDGTKG--GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
L+Y Y KG V ++ E ++GADG NS VA N + IA +
Sbjct: 114 -------ELFYDFYQHDKGLVVVTDRGEYETKVLVGADGINSNVAHKANLINGKKGIALE 166
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDF-YGWVFPKCDHVAVGTGTVTHK-GDIKKFQL 287
V + D ++ + L V D + + YGWVFPK D +++G GT +K DIK+
Sbjct: 167 GEVYV-DNSLI--DGLKGKVVVDFNAIRYGYGWVFPKGDRLSIGVGTFLNKVSDIKEMLS 223
Query: 288 ATRNRAKDKILGGKIIRVEAHPI--PEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAA 345
D + K ++ H + P+ + ++ L+GDA +GEGIY A
Sbjct: 224 KMIEENVDGNI--KDCKIYGHQLSFPDGSDGVFNNDKIILIGDATRLADPFTGEGIYNAL 281
Query: 346 KSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWP------TYKVLDVLQK 394
+ + + +++ +G +DE +R E W TY +D ++K
Sbjct: 282 LTADISFD-VLKKHFSGECGLDEYTIRLNREVVPDVGWAYRLAQFTYNNMDFIEK 335
>gi|363889448|ref|ZP_09316810.1| hypothetical protein HMPREF9628_01446 [Eubacteriaceae bacterium
CM5]
gi|361966742|gb|EHL19634.1| hypothetical protein HMPREF9628_01446 [Eubacteriaceae bacterium
CM5]
Length = 364
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 140/316 (44%), Gaps = 41/316 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIP---LCMVGEFDLP--LD 106
V ++G GPAG +AA L KN ++ LI++ K K CGG I L ++ +
Sbjct: 5 VVIVGAGPAGVSAAYHLKKNNIDCCLIDKSKFPRFKLCGGLITEKTLILLNNYGFSDFNK 64
Query: 107 IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRER-AEKNGASVINGLF 165
II K+ K+ ++S + T + +Y +V R D + E+ E G +++
Sbjct: 65 IIKDKINKVNILSNGKNVI----TTETTKYFNLVDRMEFDNWFLEKYIEIGGIALLGKRV 120
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
K++L + K V + + D VI ADGA +K IN YA
Sbjct: 121 SKINLDQ----------------KELVVDNTNITFDYVIAADGAKGISSKIINREPLKYA 164
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKF 285
+ + + + + + + ++ + Y W FPK + +G K DI
Sbjct: 165 FGLETDI----DTNLCDNDKHSIDLDVSIAKNGYYWRFPKNNKTTLGFAFSFDK-DIDYS 219
Query: 286 QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR--VALVGDAAGYVTKCSGEGIYF 343
+L+ + + ++ G + P R + +S + + LVGDAAG+V +GEG Y+
Sbjct: 220 ELSRKLLPDNCVIRGAFL-------PYGNRIKVVSDKRGMLLVGDAAGFVDAITGEGTYY 272
Query: 344 AAKSGRMCAEAIIEGS 359
A KSG + A AI+ S
Sbjct: 273 AIKSGEIAANAIMTNS 288
>gi|336121557|ref|YP_004576332.1| Digeranylgeranylglycerophospholipid reductase [Methanothermococcus
okinawensis IH1]
gi|334856078|gb|AEH06554.1| Digeranylgeranylglycerophospholipid reductase [Methanothermococcus
okinawensis IH1]
Length = 392
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 165/378 (43%), Gaps = 58/378 (15%)
Query: 70 AKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLD--IIDRKVTKMKMISPSNVAV 125
+KNG +T LIE+ + +P C A+P + +F + D + + +++P+ +
Sbjct: 29 SKNGAKTLLIEKSQEIGEPVRCAEAVP--KMEDFGITPDPQFVRSHIKGGYLVAPNGKII 86
Query: 126 DIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEY 185
++ K Y+ V R++ D YL R+ + G V + +DL N Y
Sbjct: 87 EVSGG-KTDGYV--VERKIFDKYLAVRSARVGTKVAVKSRV-VDLEHNGNG--------Y 134
Query: 186 DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ---------ERVKIPD 236
D +GE+ ++ VI ADG S VA+ AG I Q VK+ D
Sbjct: 135 DVIVSHLGEEYIIKAKIVIAADGVESSVAEM--AGLKSKKIPTQVCSCAEYEMTNVKLLD 192
Query: 237 EKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLATRNRAKD 295
+M+ E Y GD +SP Y W+FPK D VG G + HK I +
Sbjct: 193 NEMM------EFYFGD-ISPKGYAWIFPKGDTANVGLGVIDKHKKAIDYLNEFIEH---- 241
Query: 296 KILGGKIIRVEAHPIPEH--------PRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
IL G++ +A PI P + + + +VGDAAG ++ SG GIY +
Sbjct: 242 PILEGRL--KDATPIEFKCGGAPVGGPIEKTVDDNIIVVGDAAGQISPLSGGGIYLSMSC 299
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPT----YKVLDVLQKVFYRS-NPA 402
G M E + +N +D L +Y KW + Y+ T + ++LQK+ + N
Sbjct: 300 GSMAGEVAAKCIKNNNCSVDA--LIEYENKWKEKYYDTLMTELRYKNILQKLTEKELNAL 357
Query: 403 REAFVEMCADEYVQKMTF 420
+A + + V+K+ F
Sbjct: 358 ADAMDDKLEEVDVKKIAF 375
>gi|390443294|ref|ZP_10231088.1| geranylgeranyl reductase [Nitritalea halalkaliphila LW7]
gi|389666909|gb|EIM78348.1| geranylgeranyl reductase [Nitritalea halalkaliphila LW7]
Length = 379
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 160/367 (43%), Gaps = 51/367 (13%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLDI---I 108
V ++G GPAG AA T A G L+E++ L K CGG L G LP DI I
Sbjct: 6 VIIVGTGPAGAFAAYTAAAAGRSVLLVEKECLPRYKTCGGG--LVWRGRKLLPFDISPAI 63
Query: 109 DRKVTKMKMIS---PSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
+R+ T+ + P V + + MV R+ D + E A K GA ++
Sbjct: 64 EREFTRAHVYFEHLPDPVFAT-----REEPIVTMVMRDTFDQLIVEEARKLGAELL---- 114
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGV---GEKRTLEVDAVIGADGANSRVAKSINAGDY 222
EQ V E T GV +K T +I ADG S AK D
Sbjct: 115 ---------EQAAVTAVRE---TAEGVEVDTKKGTYTGSYLIAADGMLSPTAKLAGFKDD 162
Query: 223 DYAI-AFQERVKIPDEKMVYYENLAEMYVGD-DVSPDFYGWVFPKCDHVAVGTGTVTHKG 280
I A + V + + + LA+ D D P YGW FPK +H+++G GT +
Sbjct: 163 RQLIPAIEYEVGVSEAD---FARLAQEVRFDVDAIPKGYGWCFPKKNHLSIGVGTFERR- 218
Query: 281 DIKKFQLATRNRAKDKILG-GKIIRVEAH--PIPEHPRPRRLS-GRVALVGDAAGYVTKC 336
K L T ++ K+LG + EAH +P PR + ++ GRV LVGDAAG+
Sbjct: 219 ---KINLRTYYQSYLKLLGIQETTFEEAHGFQVPITPRSQGIAKGRVLLVGDAAGFADSL 275
Query: 337 SGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVF 396
+ EGI A +G++ AEA I + + + +G + D + P +L ++F
Sbjct: 276 TAEGISNALYTGKLAAEA-IHADFHQPQAVVQG----FQALLDASLIPELGTSHILARMF 330
Query: 397 YRSNPAR 403
Y R
Sbjct: 331 YGQKTIR 337
>gi|312128650|ref|YP_003993524.1| fad dependent oxidoreductase [Caldicellulosiruptor hydrothermalis
108]
gi|311778669|gb|ADQ08155.1| FAD dependent oxidoreductase [Caldicellulosiruptor hydrothermalis
108]
Length = 357
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 144/328 (43%), Gaps = 49/328 (14%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDN----CKPCGGAIP---LCMVGEFDLPL 105
+ ++GGGPAG A L++N L +R + K CGG I M+ +F L
Sbjct: 4 IIIVGGGPAGSTLARLLSRNYNILLLEKRSFEKSDIRTKCCGGLIAPDAQLMLAKFGLG- 62
Query: 106 DIIDRKVTKMKMISPSNVAV---DIGQTLKPH---EYIGMVRREVLDAYLRERAEKNGAS 159
V K + +P AV D +++ + YI + RE D +L
Sbjct: 63 ------VPKEVLQTPQLFAVRAIDFDNSIERYYQRHYIN-IDREEFDKWLIRSIPSQVDV 115
Query: 160 VINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINA 219
+ N ++ +++ N + G++ + ++GADGA S+V + N
Sbjct: 116 LTNSIYKSLEIVGNKNIKVKFSWN---------GKEYKEQCKLLVGADGAFSKVRRQ-NF 165
Query: 220 GDY---DYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV 276
++ I QE + + YY + D DFY W PK +H+ +GT +
Sbjct: 166 NNFLSPKLYIVIQEWFE-TSFNLDYYGA-----IFDREITDFYSWTIPKENHLLIGTALM 219
Query: 277 THKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL------SGRVALVGDAA 330
+K +KKF+L + K KI G KI ++ RP + + ++AL+G+AA
Sbjct: 220 PNKDALKKFELL---KEKLKIYGFKIEKMTKRCSAYIFRPTSVRHIITGNDKIALIGEAA 276
Query: 331 GYVTKCSGEGIYFAAKSGRMCAEAIIEG 358
G+++ S EG+ FA KS A+A+ G
Sbjct: 277 GFISPSSAEGLSFAFKSALALAKALESG 304
>gi|94969851|ref|YP_591899.1| geranylgeranyl reductase [Candidatus Koribacter versatilis
Ellin345]
gi|94551901|gb|ABF41825.1| geranylgeranyl reductase [Candidatus Koribacter versatilis
Ellin345]
Length = 379
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 136/319 (42%), Gaps = 46/319 (14%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVT 113
++G GP+G AAA LAK G L++R + KPCGG + + + + + R V
Sbjct: 8 IVGAGPSGTAAAYDLAKAGHSVLLLDRSEFPRVKPCGGGLTVKTLKALRYSVTPVVRIVA 67
Query: 114 KMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRN 173
K ++ +N+A I K VR E D LR+ E F K+
Sbjct: 68 KGLQVT-NNLAEPIELRGKHPICFMTVRAEFDDFCLRQTLEAGAR------FQKISEITG 120
Query: 174 FEQ-PYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERV 232
E+ P + DG + ++GADGANS+V + A + F+ +
Sbjct: 121 VEEFPDHVVLRTRDGE---------FHAEYLLGADGANSKVRLLLGAQPW-----FRRAI 166
Query: 233 KIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGT-----VTHKGDI----- 282
+ V+ +N M + V P Y W F K DH+ VG T V D+
Sbjct: 167 AVEAHAPVH-KNAKAMEIDFGVVPRGYAWSFHKGDHLNVGLCTESAEVVKLSRDLLANYL 225
Query: 283 -KKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGI 341
+KF + LG +R E P+H R + LVGDAAG SGEGI
Sbjct: 226 KRKFGSDEYSHFVGHYLGIGGMRYE----PKHKR-------IFLVGDAAGMTDPLSGEGI 274
Query: 342 YFAAKSGRMCAEAIIEGSE 360
Y A KSG+ A A+++ SE
Sbjct: 275 YNAIKSGQAAASALLQNSE 293
>gi|444910477|ref|ZP_21230661.1| geranylgeranyl reductase [Cystobacter fuscus DSM 2262]
gi|444719096|gb|ELW59895.1| geranylgeranyl reductase [Cystobacter fuscus DSM 2262]
Length = 401
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 168/394 (42%), Gaps = 48/394 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCG-GAIP--LCMVGEFDL-PLDI 107
+ ++G GPAG +AA LA+ G L+ER K CG G P L M+ L L
Sbjct: 10 IVIVGAGPAGSSAATFLAQQGARVTLLERGHFPRDKTCGDGCTPRTLWMLERLGLGTLAS 69
Query: 108 ID-RKVTKMKMISPSNVAVDIGQTLKPHEYIG----MVRREVLDAYLRERAEKNGASVIN 162
D V + +SP V D P G ++ REVLD L RA + GA++
Sbjct: 70 TDGTPVDSVYAVSPGGVVWD---AAIPARLFGGRASIIPREVLDERLVRRAVQAGATLRE 126
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDY 222
G+ + + L R + P + GG +L D V+G DG+ S + ++ A +
Sbjct: 127 GVRV-VGLEREGDVPRLRCL-------GG----ESLLADVVLGCDGSPSVIRGALGAPGF 174
Query: 223 D-YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFP------------KCDHV 269
+ AF RV + ++ + L + D+ YGW+FP + D +
Sbjct: 175 PAHECAFAIRVYYENVRLSHPRGLGFFW--DETLLPAYGWIFPLPGGRANVGLGMRADQL 232
Query: 270 AVGTGTVTHKGDIKKFQLATRNRAKDKILGGKII-RVEAHPIPEHPRPRRLS-GRVALVG 327
A + +++F + R A+ + GG+ + R + H +P R + + L+G
Sbjct: 233 AASGARLPEL--LERFCASPRVAAE--LAGGRRVGRPKGHHLPFGSSARHTTFNQALLLG 288
Query: 328 DAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYK 387
DAAG+V +GEGI FA +SG AEA+ E G + L Y +W + ++
Sbjct: 289 DAAGFVNPLTGEGIEFALESGAFAAEAVAEAVHAGD--LSARGLGGYARRWRTRFRTAFR 346
Query: 388 VLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFD 421
+ L F R F C DE + D
Sbjct: 347 LNRRLMWAFERPRLLDRVFRTACRDERTRDELID 380
>gi|48477640|ref|YP_023346.1| geranylgeranyl hydrogenase [Picrophilus torridus DSM 9790]
gi|48430288|gb|AAT43153.1| geranylgeranyl hydrogenase [Picrophilus torridus DSM 9790]
Length = 379
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 148/358 (41%), Gaps = 49/358 (13%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIP---LCMVGEFDLPLDI 107
V ++G GPAG AA L+K G + +E + KP C G + MV +
Sbjct: 4 VIIVGAGPAGSYAAYLLSKKGFDVLQLEEHREIGKPVECTGLVSKRVFSMVRSRSMI--- 60
Query: 108 IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-INGLFM 166
KV + P+N + + K E I M R + D + A +NG + IN +
Sbjct: 61 --NKVHGANVYFPNNKYIHVS---KNEETIVMYRDQ-FDKDVAAMAIENGTDLRINARAI 114
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAI 226
+ +F + + E G + E++T +IGADG NS V + ++ I
Sbjct: 115 DASVNDDFAS---VKFRE----NGKIQEEKT---KIIIGADGVNSTVRRLLSNERPSRII 164
Query: 227 A---FQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIK 283
+ K+ D+ V +Y+G S F+GW P D +G G H IK
Sbjct: 165 STYQVDSSYKMDDQDDV------NVYLGSSSSRGFFGWAVPSGDITRIGVGA-DHDTAIK 217
Query: 284 KFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYF 343
F+ +N DKILG + PIP + R LVGDAAG V SG GIY
Sbjct: 218 YFKNINKN-FNDKILG-----INGSPIPIRYLKKTYGKRYMLVGDAAGIVKPLSGGGIYT 271
Query: 344 AAKSGR---MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398
SG+ + AE+II+ + E + Y + W + +Q VF R
Sbjct: 272 GMISGKNAAIAAESIIDRED-----FSEKSMSLYQKLWRSEIGRELYIDSKIQDVFSR 324
>gi|261402587|ref|YP_003246811.1| geranylgeranyl reductase [Methanocaldococcus vulcanius M7]
gi|261369580|gb|ACX72329.1| geranylgeranyl reductase [Methanocaldococcus vulcanius M7]
Length = 391
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 148/329 (44%), Gaps = 28/329 (8%)
Query: 65 AAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDL-PLDIIDRKVTKMKMI-SP 120
A+ AKNGV+T LIE+ + +P C AIP + EF + P R + K ++ SP
Sbjct: 22 ASYATAKNGVKTLLIEKSQEIGEPVRCAEAIP--SIEEFGIKPSPEFVRNIIKGGILFSP 79
Query: 121 SNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-INGLFMKMDLPRNFEQPYV 179
S V + Q K ++ V R++ D YL RA + GA + + + ++ ++ V
Sbjct: 80 SGKKVVVTQG-KAQGFV--VERKIFDKYLAVRAGRAGAKIAVKSTVVGLERDGDYWNVIV 136
Query: 180 LYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK--SINAGDYDYAIAFQERVKIPDE 237
+ +GE+ ++ VI ADG S VA+ + A I ++ +
Sbjct: 137 EF----------LGEEYVIKTKIVIAADGVESNVAEYAGLKAKKKPLDICSCAEYEMTNV 186
Query: 238 KMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKF--QLATRNRAKD 295
++ + +N+ E Y G+DV+ Y W+FPK + VG G K + + + A D
Sbjct: 187 EL-FDKNMMEFYFGNDVAKGGYAWIFPKGETANVGLGVRDKKKKAIDYLEEFIENSLASD 245
Query: 296 KILGGKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEA 354
K+ + + P P + + + +VGDAAG ++ +G GIY A G M E
Sbjct: 246 KLKNATPVEFKVGGAPVSGPIEKTYADGILVVGDAAGQISPLTGGGIYLAMDCGLMAGE- 304
Query: 355 IIEGSENGTRMIDEGDLRKYLEKWDKTYW 383
+ + E L++Y W + ++
Sbjct: 305 -VASKSIKSNNWSEDVLKEYERLWKEKHY 332
>gi|428222240|ref|YP_007106410.1| geranylgeranyl reductase [Synechococcus sp. PCC 7502]
gi|427995580|gb|AFY74275.1| geranylgeranyl reductase family protein [Synechococcus sp. PCC
7502]
Length = 381
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 148/337 (43%), Gaps = 39/337 (11%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERKL-DNCKPCGGAIPLCMVGEFDLPLD-----II 108
V+G GP+GG+AA LAK+ ++E++L KPCGG +P + FD +
Sbjct: 6 VVGAGPSGGSAAYHLAKHKHSVLVLEKELLPRYKPCGGGVPPSVQRWFDFDFKPAVSLTV 65
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
++ +M P V + + E + MVRR++ D +L + A+K GA V +
Sbjct: 66 NQVRYTWQMGDPQLVELGLA------EPMWMVRRDIFDHHLIKEAQKLGAEVRD------ 113
Query: 169 DLPRNFEQPYVLYYTE-YDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIA 227
N E + + ++ + T + LE +I ADGA +AK +
Sbjct: 114 ----NTEVTGIKWQSDRWLVTVKNADQTEVLEAKYLIAADGARGSMAKW---------LG 160
Query: 228 FQERVK-----IPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDI 282
F+ER K + E V N A ++ + Y W FPK D ++G GT +
Sbjct: 161 FKERKKRMGAALEVEAKVDTNNDATLHFDFGAVNNGYIWNFPKADGYSIGIGTFRGGEEK 220
Query: 283 KKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALV-GDAAGYVTKCSGEGI 341
+ + + A+ + I+ HP+ L + AL+ G+AA V + EGI
Sbjct: 221 QNLKEIAQEYAQTFGVDLSAIKQYGHPLCLWDGDMPLHTQNALLTGEAACIVDPFTAEGI 280
Query: 342 YFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKW 378
A +G + A+AI S NG R + ++ E+W
Sbjct: 281 RPALFTGMLAAQAIAH-SLNGDREALKNYTKRVQEEW 316
>gi|312134175|ref|YP_004001513.1| fad dependent oxidoreductase [Caldicellulosiruptor owensensis OL]
gi|311774226|gb|ADQ03713.1| FAD dependent oxidoreductase [Caldicellulosiruptor owensensis OL]
Length = 357
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 146/327 (44%), Gaps = 47/327 (14%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDN----CKPCGGAIP---LCMVGEFDLPL 105
+ ++GGGPAG A L++N L +R + K CGG I M+ +F L
Sbjct: 4 IIIVGGGPAGSTLARLLSRNYNILLLEKRSFEKSDIRTKCCGGLIAPDAQLMLAKFGLG- 62
Query: 106 DIIDRKVTKMKMISPSNVAV---DIGQTLKPH--EYIGMVRREVLDAYLRERAEKNGASV 160
V K + +P AV D +++ + Y + RE D +L +
Sbjct: 63 ------VPKEVLQTPQLFAVRAIDFDNSIERYYQRYYINIDREEFDKWLIRSIPSQVDVL 116
Query: 161 INGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAG 220
N ++ +++ N E V + G++ + ++GADGA S++ + N
Sbjct: 117 TNSIYKSLEIVGN-ENIKVKFSWN--------GKEYKEQCKLLVGADGAFSKLRRQ-NFN 166
Query: 221 DY---DYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT 277
++ IA QE + + YY + D DFY W PK +H+ +GT +
Sbjct: 167 NFLSPKLYIAIQEWFE-TGFNLDYYGA-----IFDREITDFYSWTIPKENHLLIGTALMP 220
Query: 278 HKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL------SGRVALVGDAAG 331
+K +KKF+L + K KI G K+ ++ RP + + ++AL+G+AAG
Sbjct: 221 NKDALKKFELL---KEKLKIYGFKVEKMTKRCSAYIFRPTSVRHIITGNDKIALIGEAAG 277
Query: 332 YVTKCSGEGIYFAAKSGRMCAEAIIEG 358
+++ S EG+ FA KS A+A+ G
Sbjct: 278 FISPSSAEGLSFAFKSSLALAKALESG 304
>gi|14520382|ref|NP_125857.1| bacteriochlorophyll synthase 43 kDa subunit or geranylgeranyl
hydrogenase [Pyrococcus abyssi GE5]
gi|74558531|sp|Q9V2B0.1|GGR_PYRAB RecName: Full=Digeranylgeranylglycerophospholipid reductase;
Short=DGGGPL reductase; AltName:
Full=2,3-di-O-geranylgeranylglyceryl phosphate
reductase; AltName: Full=Geranylgeranyl reductase;
Short=GGR
gi|5457597|emb|CAB49088.1| Geranylgeranyl hydrogenase [Pyrococcus abyssi GE5]
gi|380740906|tpe|CCE69540.1| TPA: bacteriochlorophyll synthase 43 kDa subunit or geranylgeranyl
hydrogenase [Pyrococcus abyssi GE5]
Length = 393
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 164/368 (44%), Gaps = 27/368 (7%)
Query: 66 AETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLD--IIDRKVTKMKMISPS 121
A +AK G L+++K + K C I + + EFD+P D I+R++ K+ SPS
Sbjct: 18 ARDVAKAGFSVLLVDKKAAIGTPKQCAEGITIEVFKEFDIPYDKRFINREIYGAKIYSPS 77
Query: 122 NVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLY 181
++ H ++ R+V D L A K GA V+ + + RN + V
Sbjct: 78 GYTAELRYK---HVSGVILERKVFDKMLAYYAAKAGAEVLARTEVVDVIRRNGKIVGVRA 134
Query: 182 YTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMV- 240
E GE +E ++ ADG S +A+ AG YA + E ++
Sbjct: 135 KHE--------GEPLEIEAKVIVAADGVESTIAR--KAGINTYAPPHEFDSGYEYEMLIE 184
Query: 241 -YYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVGTGTVTHKGDIKKFQLATRNRAKDKIL 298
Y +L ++ G++V+P Y W+FPK D VG G + K+ L + ++ I
Sbjct: 185 GYDPDLIHLFFGNEVAPRGYVWIFPKDEDRANVGIGIASDHPQTAKYYL-DKWLKENNIP 243
Query: 299 GGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIE 357
KI+ V +P + L V +VGDAA V G G+ A K+ + A+ II+
Sbjct: 244 MRKILEVNVGLVPVGGFVKELVKDNVLVVGDAARQVNPVHGGGMKEAMKAASIAAKWIIK 303
Query: 358 GSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR-SNPAREAFVEMCADEYVQ 416
E L+ Y E+W +T P + L L+K + ++ + FV++ + ++
Sbjct: 304 ALEEENLE----LLKNYSEEWWRTEGPRMEKLLKLRKAMEKLTDEDLDVFVQLVSGTDLE 359
Query: 417 KMTFDSYL 424
K+ +YL
Sbjct: 360 KLAGGNYL 367
>gi|336476462|ref|YP_004615603.1| geranylgeranyl reductase [Methanosalsum zhilinae DSM 4017]
gi|335929843|gb|AEH60384.1| geranylgeranyl reductase [Methanosalsum zhilinae DSM 4017]
Length = 395
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 146/345 (42%), Gaps = 36/345 (10%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDL-PL-DII 108
+ V G GPAG AA+ A NG LIE P C G + + E DL P D I
Sbjct: 1 MVVAGAGPAGSIAAKYAALNGANVLLIEEHAAIGSPVECTGLLGTRAISECDLDPCNDFI 60
Query: 109 DRKVTKMKMISPSNVAVDI-GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK 167
+++ + SPS DI G++ K + +V R+ LD L A G V +
Sbjct: 61 LNEISGTFVYSPSGQCFDIDGKSAKAY----VVSRKALDKKLFSDAIDAGVDVSLRTKLV 116
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIA 227
+ N Q ++ + G K+ ++ VIGADG S+VAK G+ I+
Sbjct: 117 NIIWCNDHQELIVLHN---------GIKKKIKTRMVIGADGIKSKVAKIAGLGNVKEIIS 167
Query: 228 FQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKGDIKKFQ 286
++I N E++ G V+P F+ W P +++ +G G +
Sbjct: 168 ---GIQIETPYRSKNSNFVEVFPGS-VAPGFFAWTVPVNQNISRIGLGVNGIESPNALEY 223
Query: 287 LATRNRAKDKILG---GKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYF 343
L + + ++G ++ V IP P R +S V +VGDAAG V SG GIY
Sbjct: 224 LRSFLNSNPNVIGRHGDSLLDVAIGGIPLGPLKRTVSDGVLVVGDAAGQVKPTSGGGIY- 282
Query: 344 AAKSGRMCAEAIIEGSENGTRMIDEGDLRKYL----EKWDKTYWP 384
G +CA+ I G + DE YL +KW K P
Sbjct: 283 ---PGAICAK--IAGKVAADSVSDEDTSSDYLCQYEQKWRKKIGP 322
>gi|375082248|ref|ZP_09729316.1| geranylgeranyl hydrogenase [Thermococcus litoralis DSM 5473]
gi|374743136|gb|EHR79506.1| geranylgeranyl hydrogenase [Thermococcus litoralis DSM 5473]
Length = 393
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 173/386 (44%), Gaps = 37/386 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLD--II 108
V V+G G AG A +AK G LI++K + K C I + + ++D+P D I
Sbjct: 5 VVVVGSGIAGPIVARNVAKAGFSVLLIDKKPAIGTPKQCAEGISIKVFDKYDIPYDRRYI 64
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMK 167
+R++ K+ SPS ++ ++ E G++ R+V D L A K GA V+
Sbjct: 65 NREIYGAKLYSPSGYELE----MRYKEVSGVILERKVFDKMLAYYAAKAGADVL-ARTEA 119
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLE-----VDAVIGADGANSRVAKSINAGDY 222
+D+ R DG G+ K E D ++ ADG S +A+ AG
Sbjct: 120 LDVIRK------------DGKIAGIKAKHEDEPVEIYADIIVAADGVESTIARK--AGIN 165
Query: 223 DYAIAFQERVKIPDEKMV--YYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVGTGTVTHK 279
YA + E ++ + +L ++ G++V+P Y WVFPK D VG G +
Sbjct: 166 TYAPPHEFDSGYEYEMLIEGFDPDLIHLWFGNEVAPRGYVWVFPKDEDRANVGIGINSDN 225
Query: 280 GDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSG 338
K+ L + ++ I K++ + +P + L+ V +VGDAA V G
Sbjct: 226 PKTAKYYL-DKWLEENNIPAKKLLEINVGVVPVGGFVKELAKDNVVVVGDAARQVNPMHG 284
Query: 339 EGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398
G+ A ++G + ++ I++ E + + +++ EK K KV V +K+
Sbjct: 285 GGMAEAMEAGTIASKWIVKALEEENISLLQNYTKEWWEKDGKRLERVLKVRRVTEKL--- 341
Query: 399 SNPAREAFVEMCADEYVQKMTFDSYL 424
++ + F+++ + +K+ Y+
Sbjct: 342 TDEDLDLFIQILSGADAEKIAGGDYI 367
>gi|339626449|ref|YP_004718092.1| geranylgeranyl reductase [Sulfobacillus acidophilus TPY]
gi|379005907|ref|YP_005255358.1| geranylgeranyl reductase [Sulfobacillus acidophilus DSM 10332]
gi|339284238|gb|AEJ38349.1| geranylgeranyl reductase [Sulfobacillus acidophilus TPY]
gi|361052169|gb|AEW03686.1| geranylgeranyl reductase [Sulfobacillus acidophilus DSM 10332]
Length = 376
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 138/335 (41%), Gaps = 34/335 (10%)
Query: 69 LAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDI 127
LA++G++ L+E+ + KPCGGA+ + LP D T + +
Sbjct: 20 LAESGLQVRLLEKAAIPRVKPCGGALTDRALAW--LPPDYSAVLQTHPYQWTCQAARLPP 77
Query: 128 GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDG 187
+P Y +V R DA+L AE GA V+ E P E DG
Sbjct: 78 VTLTRPEPYCHIVDRPEFDAWLTRHAETAGAVVLT------------EHPVTGLKEEPDG 125
Query: 188 TKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVY--YENL 245
G + + + VI ADG + + A + V++P Y + +
Sbjct: 126 V-GVMTSRGPFQARYVIAADGGQGPSRRLLGLPRPRMGAALE--VEVPVSPTFYDRFRDR 182
Query: 246 AEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGG--KII 303
E++ + P Y WV P+ + VG G+ +G K L T A I G
Sbjct: 183 VEIHFTE--IPWGYAWVIPRSPILNVGVGSFRAEGLALKKMLDTFMTA---IFGDLPPAR 237
Query: 304 RVEAHPIP-EHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENG 362
V AHP+P H + GRV VGDAAG + S EGIY A SG + A+AI+ ++
Sbjct: 238 TVRAHPLPYRHRWVPPIKGRVLWVGDAAGLMDPFSAEGIYSALVSGHLAADAIVRHLQSH 297
Query: 363 TRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFY 397
+ L ++ T P++K + ++FY
Sbjct: 298 VPLTHYDQLLRH------TLGPSWKAASGMARIFY 326
>gi|452852792|ref|YP_007494476.1| Geranylgeranyl reductase [Desulfovibrio piezophilus]
gi|451896446|emb|CCH49325.1| Geranylgeranyl reductase [Desulfovibrio piezophilus]
Length = 402
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 153/368 (41%), Gaps = 49/368 (13%)
Query: 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDL---- 103
+ V + G GP+G A LA++G +++R + K CGG + + +
Sbjct: 3 KQFDVIICGCGPSGATAGTILARSGRSVLMLDRARFPRKKLCGGLLTWKSIKLLEAVHGE 62
Query: 104 PLDIIDRK-----VTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGA 158
+D + R+ V+ I + + G++ P + R V DA+L + EK GA
Sbjct: 63 TIDSLTRQGIINFVSDHYAIRTFSNTISEGKSPFPFHF---TDRTVFDAHLLKLTEKAGA 119
Query: 159 SVINGLFMKMDLPRNFEQPYVLYYTEYDGT---KGGVGEKRTLEVDAVIGADGANSRVAK 215
+ E+ VL GT +GG L+ VIGADGANS V
Sbjct: 120 EIR-------------EEARVLSCDPEQGTVTLEGGT----VLQGHFVIGADGANSMVRA 162
Query: 216 SINAGDYD---YAIAFQERVKIPDEKMVYYENLA--EMYVGDDVSPDFYGWVFPKCDHVA 270
+ D+D + ++I + + +A E+Y+G + YGWVFP D V
Sbjct: 163 AFP--DHDRKRFRRHMAPTIEISLDLADFPRTVAFPELYIGFLNAG--YGWVFPNQDRVI 218
Query: 271 VGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRR-LSGRVALVGDA 329
VG + +K + Q+ KI I + HP+P + G L GDA
Sbjct: 219 VGMCGLRNKKE-SFLQIFKEYLDFLKIKSNTIPTLHGHPLPYGNYLHTPVFGNALLAGDA 277
Query: 330 AGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVL 389
G+V GEGI+FA SG EAI +E R G L YL K + P K
Sbjct: 278 GGFVEPLLGEGIFFALCSGLYAGEAI---AEAWPRQAHPGPL--YLRKMHRQIIPELKAS 332
Query: 390 DVLQKVFY 397
D L+ + +
Sbjct: 333 DKLRWLLF 340
>gi|159904909|ref|YP_001548571.1| geranylgeranyl reductase [Methanococcus maripaludis C6]
gi|209572863|sp|A9A6R1.1|GGR_METM6 RecName: Full=Digeranylgeranylglycerophospholipid reductase;
Short=DGGGPL reductase; AltName:
Full=2,3-di-O-geranylgeranylglyceryl phosphate
reductase; AltName: Full=Geranylgeranyl reductase;
Short=GGR
gi|159886402|gb|ABX01339.1| geranylgeranyl reductase [Methanococcus maripaludis C6]
Length = 390
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 169/372 (45%), Gaps = 53/372 (14%)
Query: 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPL 105
N + V V+G GPAG A+ +KNG +T LIE+ + P C A+P + +F +
Sbjct: 5 NDSYDVVVVGAGPAGSMASYNASKNGAKTLLIEKSQEIGTPVRCAEAVP--RLEDFGINP 62
Query: 106 D--IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-IN 162
D + + +I+P N + + K Y+ V R+V D +L R+ + G + +
Sbjct: 63 DPSFVRSYIKGGYLIAP-NGKKVVVKGGKTDGYV--VERKVFDKFLAIRSGQAGTQIAVK 119
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVA-----KSI 217
K++ + +V Y +G++ ++ VI ADG S +A KS
Sbjct: 120 SRVTKIEKTDDGYDVFVNY----------LGDEYIVKTKIVIAADGVESNIAEYAGLKSK 169
Query: 218 NAGDYDYAIAFQE--RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGT 275
+ + A E VK+ D +M+ E Y G D+ P Y W+FPK D V VG G
Sbjct: 170 KSSKEICSCAEYEMTNVKLLDNEMM------EFYFG-DICPKGYIWLFPKGDTVNVGIGI 222
Query: 276 VTHKGDIKKFQLATRNR-AKDKILGGKI-------IRVEAHPIPEHPRPRRLSGRVALVG 327
+ D KK L + + ++ G++ +V P+ P + ++ + +VG
Sbjct: 223 I----DSKKRALDYLDEFLTNPLVEGRLDNAVPIEFKVGGDPVG-GPIEKTVADNIMVVG 277
Query: 328 DAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYW-PTY 386
DAAG+V+ +G GI + G M E E ++ E L Y ++W + Y+ P
Sbjct: 278 DAAGHVSPLTGGGIGLSMACGVMAGEVAAESTK--AEDYSEEFLNLYEKRWKERYYKPLM 335
Query: 387 KVL---DVLQKV 395
K L ++LQK+
Sbjct: 336 KDLKYKNILQKL 347
>gi|68304933|gb|AAY89944.1| hypothetical protein [uncultured bacterium BAC13K9BAC]
Length = 369
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 137/325 (42%), Gaps = 52/325 (16%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLDIIDRK 111
+ ++G GP+G AA L +G L+++ KPC G + V E LP +I D K
Sbjct: 10 ILIVGAGPSGCMAASILKDSGRNVTLLDKNDFPRHKPCAGGLTPKTVDE--LPFEIADLK 67
Query: 112 ---VTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
KM + VD+ + MV RE D + + G ++ G +
Sbjct: 68 QHDSEKMLFKFTNGKTVDLNNESGACK---MVVREEFDNFFLNYVKNKGTELMKGKVTAI 124
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDA--VIGADGANSRVAKSINAGDYDYAI 226
YD V E ++ +IGADGANS V + ++ +
Sbjct: 125 ----------------YDAPNEVVVETSDYKIKCKFLIGADGANSTVRRLTTDLEFKNPV 168
Query: 227 -AFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTH------- 278
AF+ V ++ + +++ +V +++ YGW+FPK +H VG G +
Sbjct: 169 FAFEGLV----DRKISAKDVPTKFVFNELG---YGWIFPKKEHYNVGIGNLVFDPTQPKP 221
Query: 279 -KGDIKKFQLATRNRAKDKILGGKIIRVEAHPI-PEHPRPRRLSGRVALVGDAAGYVTKC 336
K D+ F KD++ ++ + PI E S R+ L+GDAAG
Sbjct: 222 KKNDLFSF-------VKDELGTNEVTHITGFPIGTEGNEYFPTSERIYLIGDAAGLAETL 274
Query: 337 SGEGIYFAAKSGRMCAEAIIEGSEN 361
GEGIY A SG+ A +I+ G+ N
Sbjct: 275 LGEGIYNAVISGKYIANSIV-GTNN 298
>gi|212223462|ref|YP_002306698.1| geranylgeranyl hydrogenase [Thermococcus onnurineus NA1]
gi|212008419|gb|ACJ15801.1| geranylgeranyl hydrogenase [Thermococcus onnurineus NA1]
Length = 396
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 172/397 (43%), Gaps = 47/397 (11%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDL 103
+T V V+G G AG A +AK G LI++K + K C I + ++D+
Sbjct: 1 MTEMKYDVVVVGAGIAGPIVARNVAKAGFSVLLIDKKSAIGTPKQCAEGISKTVFEKYDI 60
Query: 104 PLD--IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASV 160
P D I+R++ K+ SPS ++ L+ E G++ R+V D L A K GA V
Sbjct: 61 PYDRRFINREIYGAKLYSPSGYELE----LRYKEVSGVILERKVFDKMLAYYAAKAGADV 116
Query: 161 INGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLE-----VDAVIGADGANSRVAK 215
+ MD+ R DG G+ K E D ++ ADG S +A+
Sbjct: 117 L-ARTEAMDVIRK------------DGKIAGIKAKHEDEPIEIYADIIVAADGVESTIAR 163
Query: 216 SINAGDYDYAIAFQERVKIPDEKMV--YYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVG 272
AG YA + E ++ + +L ++ G++++P Y WVFPK D VG
Sbjct: 164 --KAGINTYAPPHEFDSSYEYEMLIEGFDPDLIHLWFGNEIAPRGYVWVFPKDEDRANVG 221
Query: 273 TGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAG 331
G + K+ L + ++ I K++ + +P + L+ V +VGDAA
Sbjct: 222 IGINSDNPRTAKYYL-DKWLKENNIPVKKLLEINVGVVPVGGFVKELAKDNVIVVGDAAR 280
Query: 332 YVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPT-----Y 386
V G G+ A ++G + ++ I++ E + L+ Y +W W T
Sbjct: 281 QVNPMHGGGMAEAMEAGTIASKWIVKALEEENPEL----LKNYTTEW----WGTDGKRLE 332
Query: 387 KVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSY 423
KVL V + ++ + F+++ + +K+ Y
Sbjct: 333 KVLRVRRVTEKLTDEDLDLFIQILSGADAEKIASGDY 369
>gi|441160555|ref|ZP_20967784.1| geranylgeranyl reductase [Streptomyces rimosus subsp. rimosus ATCC
10970]
gi|440616900|gb|ELQ80021.1| geranylgeranyl reductase [Streptomyces rimosus subsp. rimosus ATCC
10970]
Length = 439
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 166/383 (43%), Gaps = 44/383 (11%)
Query: 37 VSAAKTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCG-GAIP 94
VS + T+P+ +R V V+G GPAG A A LAK+G++ L+E+ K CG G P
Sbjct: 9 VSESVTTPRSEHRA-DVIVVGAGPAGSATAYHLAKSGLDVLLLEKTAFPREKVCGDGLTP 67
Query: 95 LCMVGEFDLPLDIIDR----KVTKMKMISPSNVAVDIGQTLKPHEYIGMVR-REVLDAYL 149
++ +DI + + +++I N L + G+VR R+ D L
Sbjct: 68 RATKQLINMGIDISEEAGWLRNKGLRIIGGGNRLQLDWPDLASYPDYGLVRKRDDFDEQL 127
Query: 150 RERAEKNGASVINGLFMKMDLPRNFEQPYVLYYT-EYDGTKGGVGEKRT---LEVDAVIG 205
+A+K GA L+ + N P + T +G + +GE++T V+
Sbjct: 128 ARQAQKAGAR----LYERC----NVGAPIINDLTGRIEGVQAKLGEEKTPVTFHAPLVVA 179
Query: 206 ADGANSRVAKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDF 258
ADG ++R++ ++ D +A + P Y E+ E++ D + P
Sbjct: 180 ADGNSTRLSLAMGLHRREDRPMGVAVRTYFTSPRHDDDYLESWLELWDRRGAQDRLLPG- 238
Query: 259 YGWVFPKCDHVA-VGTGTVTHKGDIKKFQL------------ATRNRAKDKILGGKIIRV 305
YGW+F D + VG G + K+ A + + G IR
Sbjct: 239 YGWIFGMGDGTSNVGLGVLNTSSSFKELDWREILKAWCASMPADWGYTPENMTG--PIRG 296
Query: 306 EAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRM 365
A P+ + +P G + LVGDA G V +GEGI +A +SG + AE I++ T
Sbjct: 297 AALPMAFNRQPHYTRG-LLLVGDAGGLVNPFNGEGIAYAMESGAIAAEVIVQAHARATYA 355
Query: 366 IDEGDLRKYLEKWDKTYWPTYKV 388
E L++Y + TY Y +
Sbjct: 356 QRELALQRYPKILKDTYGGYYSL 378
>gi|332295303|ref|YP_004437226.1| geranylgeranyl reductase [Thermodesulfobium narugense DSM 14796]
gi|332178406|gb|AEE14095.1| geranylgeranyl reductase [Thermodesulfobium narugense DSM 14796]
Length = 366
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 154/345 (44%), Gaps = 39/345 (11%)
Query: 46 LTNRNLRVAVI--GGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFD 102
+ NR L VI G GPAG AA LAK G+ LI+++ K CGG L ++
Sbjct: 1 MNNRILEFDVIICGAGPAGSTAAFLLAKKGLRVALIDKEVFPRDKLCGG---LLTKKSYN 57
Query: 103 LPLDIIDRKVTKMKMISPSN-VAVDIGQTLKPHEY----IGMVRREVLDAYLRERAEKNG 157
L I + + SN V G+T + V R+ D + ++A ++G
Sbjct: 58 LIDSIFGINFLRQETEFFSNRFEVYYGRTKIISSFSKKLFLYVDRKKFDFAILKKAIESG 117
Query: 158 ASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSI 217
A F + + + +L +T + KG ++ ADG NS + S+
Sbjct: 118 A-----YFFEKTKVVDIDVNNLLVFTNNNTFKG----------RYIVAADGVNSIIRSSL 162
Query: 218 NAGDYDYAIAFQERVKIPDEKMVY--YENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGT 275
+ +++ + + E Y + A +Y G + YGW+FP + VG G
Sbjct: 163 VKNEIIDIREYKDNLTLAMEFYDYKFTTDRASLYFG--FTKFGYGWIFPNKERTIVGMGA 220
Query: 276 VTHK--GDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGY 332
+ K G IKK N + I + +V +H IP P R+ + LVGDA G+
Sbjct: 221 LISKNNGLIKK----QFNNFLNSIGYKEPTKVFSHLIPTGWIPNRVGFNNILLVGDAGGF 276
Query: 333 VTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEK 377
V +GEGIY+A ++G++ +AI+ +N ++ E + ++L+K
Sbjct: 277 VDPITGEGIYYAVRTGQVATDAILISEKN--KLFAEINYERFLDK 319
>gi|150400117|ref|YP_001323884.1| geranylgeranyl reductase [Methanococcus vannielii SB]
gi|209572867|sp|A6US00.1|GGR_METVS RecName: Full=Digeranylgeranylglycerophospholipid reductase;
Short=DGGGPL reductase; AltName:
Full=2,3-di-O-geranylgeranylglyceryl phosphate
reductase; AltName: Full=Geranylgeranyl reductase;
Short=GGR
gi|150012820|gb|ABR55272.1| geranylgeranyl reductase [Methanococcus vannielii SB]
Length = 390
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 158/351 (45%), Gaps = 49/351 (13%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDIIDR 110
V V+G GPAG ++ +KNG +T LIE+ + P C AIP + + I
Sbjct: 10 VVVVGAGPAGSMSSYNASKNGAKTLLIEKAQEIGTPVRCAEAIPRIESFGINPSSEFIRS 69
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----INGLF 165
+ +++P+ + + + K Y+ V R++ D +L R+ K G + + GL
Sbjct: 70 YIKGAYLVAPNGKKITV-KGGKTDGYV--VERKIFDKFLAIRSAKEGTKIAVKSRVTGL- 125
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK--SINAGDYD 223
E+ Y ++ +G++ T++ VI ADG S +++ + +
Sbjct: 126 ------EKTEEGYNVFVNH-------LGKEYTVKTKLVIAADGVESTISEYAGLKSKKNH 172
Query: 224 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIK 283
+ ++ + K++ N+ E Y G ++ P Y W+FPK D V VG G + +G K
Sbjct: 173 NEVCSCAEYEMTNVKLL-DNNMMEFYFG-EICPKGYIWLFPKGDTVNVGIGII--EGSKK 228
Query: 284 KFQLATRNRAKDKILGGKI-------IRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKC 336
+ + + +L G++ +V P+ P + + +VGDAAG+V+
Sbjct: 229 AIEY-LDDFLSNPLLEGRLKNAVPVEFKVGGDPVG-GPIKKTFKDNLIVVGDAAGHVSPL 286
Query: 337 SGEGIYFAAK----SGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYW 383
+G GI A +G +CA++I ++ E L +Y +W + ++
Sbjct: 287 TGGGISLAMDCGLIAGEVCAKSI------SSKNYSEEFLSQYETRWKEKHY 331
>gi|386001258|ref|YP_005919557.1| geranylgeranyl reductase [Methanosaeta harundinacea 6Ac]
gi|357209314|gb|AET63934.1| Geranylgeranyl reductase [Methanosaeta harundinacea 6Ac]
Length = 389
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 139/328 (42%), Gaps = 50/328 (15%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGE------- 100
+ VAV+G GPAG AAET A+ G E LIERK + P CGG +P E
Sbjct: 7 EVEVAVVGAGPAGSVAAETAARLGAEVVLIERKREIGSPVQCGGFLPEIEELEGLLPKAK 66
Query: 101 -----FDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIG-MVRREVLDAYLRERAE 154
DLP ++ + ++ SPS + K +G ++ R D +L RA
Sbjct: 67 IPEALADLPEGLVLHRTRVQRICSPSGRS-------KEFSVLGRVIDRRSFDRHLAWRAA 119
Query: 155 KNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVA 214
+ GA V+ G+ ++ R G G T++ + VIGADG S A
Sbjct: 120 RAGARVLVGVRAELQEGR----------LHLSGRASG-----TMDAEVVIGADGPGSATA 164
Query: 215 KSIN-AGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VG 272
+ A + + + + D AEMY G +P Y W+ P + VA VG
Sbjct: 165 RGAGLAARGEVGVCLEYEMAGVD----IDPAAAEMYFGTASAPGGYAWIIPLGEDVANVG 220
Query: 273 TGT----VTHKG--DIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVAL 325
GT + +G ++ ++ AK+K+ G + V +P P + G V L
Sbjct: 221 VGTRPPYLLGRGLREVLDSFISEHPIAKEKLQEGSVTAVMRGLVPAGGMPPAIQRGNVLL 280
Query: 326 VGDAAGYVTKCSGEGIYFAAKSGRMCAE 353
GDAAG V SG GI A GR E
Sbjct: 281 AGDAAGMVMATSGGGIPLAMVGGRAAGE 308
>gi|291565885|dbj|BAI88157.1| geranylgeranyl reductase family protein [Arthrospira platensis
NIES-39]
Length = 376
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 145/354 (40%), Gaps = 42/354 (11%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLD-IIDRKV 112
++G GPAG AA LAK G +I++ L KPCGG + + FD I +
Sbjct: 7 IVGSGPAGATAAYHLAKKGHSILVIDKAILPRYKPCGGGVSPVVQDWFDFDFSPAISLQT 66
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----INGLFMK 167
+ + +++ + P I MVRREV D ++ ++A GA+V + G+ K
Sbjct: 67 HVVYYTWNKSEPIEVELKINP---IWMVRREVFDYFIVKQAISKGATVKDNTEVMGIEFK 123
Query: 168 MD--LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
D L + E Y Y +IGADGA +AK +
Sbjct: 124 SDRWLVKTPEDTYTGRY--------------------LIGADGAKGPMAKWLGFTKQKKL 163
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKF 285
+A ++IP + V + E + + YGW FPK D ++G G + + + F
Sbjct: 164 VAGALELEIPTSEPVDMKTYFEFGLVNSG----YGWNFPKADGYSLGAGAFSKQRKAQNF 219
Query: 286 QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVA-LVGDAAGYVTKCSGEGIYFA 344
+ + A L HPI ++L + A L G+AA V + EGI +
Sbjct: 220 KRILEDYATFFNLNLDNATECGHPISLWDGKQKLHTQNAVLAGEAACVVDPFTAEGIRPS 279
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398
SG AEAI + +D KY E ++ + L ++FYR
Sbjct: 280 IFSGLKAAEAINQALGGNINALD-----KYTETINEEWGNQMMWAQKLAQIFYR 328
>gi|116753983|ref|YP_843101.1| geranylgeranyl reductase [Methanosaeta thermophila PT]
gi|116665434|gb|ABK14461.1| 2,3-di-O-geranylgeranylglyceryl phosphate reductase [Methanosaeta
thermophila PT]
Length = 381
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 159/379 (41%), Gaps = 68/379 (17%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLC-----MVGEFDL 103
+R+ V+G GPAG AAET A+ G + L+ER+++ P CGG IP ++ + L
Sbjct: 1 MRIIVVGAGPAGSTAAETAARLGADVILVERRMEIGSPVQCGGFIPEASELRDLLPDAVL 60
Query: 104 PLDIID-------RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKN 156
P +++ + ++ +PS + + + V R D YL RA +
Sbjct: 61 PETLVEIPERCILNRTRIQRLYAPSGRSAEFPVAGR------CVDRRSFDRYLAHRAARA 114
Query: 157 GASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGA----NSR 212
GA +I G TE D + K E +SR
Sbjct: 115 GAQLIVG-------------------TEADVRGESIHLKGRREGIIDADIIIGADGPSSR 155
Query: 213 VAKSINAGDYDY-AIAFQ-ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA 270
+A++I A D I + E V + ++ + AEMY G+ +P Y W+ P D +A
Sbjct: 156 IAEAIGAVQRDEPGICLEYEMVDVDIDR-----DAAEMYFGERWAPGGYAWIIPLGDDIA 210
Query: 271 -VGTGTVTH--KGDIKKFQLATRNRAKDKILGGKIIR------VEAHPIPEHPRPRRL-S 320
VG G +G+I L R ++ G+I+R V +P P + S
Sbjct: 211 NVGVGVRRSYIRGEI-DLPLILRRFVEEHPHAGRILRKGEIVAVMRGIVPSGGMPEIIQS 269
Query: 321 GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDK 380
GR L GDAAG+V SG G+ A +GR+ E + GDL Y ++ +K
Sbjct: 270 GRFLLAGDAAGHVMATSGGGVPLAMVAGRIAGEVAATHARG-------GDLNVYTQRIEK 322
Query: 381 TYWPTYKVLDVLQKVFYRS 399
+ +++++ R+
Sbjct: 323 ELGAPLRGSVIIRRMVDRA 341
>gi|409990559|ref|ZP_11273917.1| geranylgeranyl reductase [Arthrospira platensis str. Paraca]
gi|409938584|gb|EKN79890.1| geranylgeranyl reductase [Arthrospira platensis str. Paraca]
Length = 376
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 145/354 (40%), Gaps = 42/354 (11%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLD-IIDRKV 112
++G GPAG AA LAK G +I++ L KPCGG + + FD I +
Sbjct: 7 IVGSGPAGATAAYHLAKKGHSILVIDKAILPRYKPCGGGVSPIVQDWFDFDFSPAISLQT 66
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----INGLFMK 167
+ + +++ + P I MVRREV D ++ ++A GA+V + G+ K
Sbjct: 67 HVVYYTWNKSEPIEVELKINP---IWMVRREVFDYFIVKQAISKGATVKDNTEVMGIEFK 123
Query: 168 MD--LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
D L + E Y Y +IGADGA +AK +
Sbjct: 124 SDRWLVKTPEDTYTGRY--------------------LIGADGAKGPMAKWLGFTKQKKL 163
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKF 285
+A ++IP + V + E + + YGW FPK D ++G G + + + F
Sbjct: 164 VAGALELEIPTSEPVDMKTYFEFGLVNSG----YGWNFPKADGYSLGAGAFSKQRKAQNF 219
Query: 286 QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVA-LVGDAAGYVTKCSGEGIYFA 344
+ + A L HPI ++L + A L G+AA V + EGI +
Sbjct: 220 KRILEDYATFFNLNLDNATECGHPISLWDGKQKLHTQNAVLAGEAACVVDPFTAEGIRPS 279
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398
SG AEAI + +D KY E ++ + L ++FYR
Sbjct: 280 IFSGLKAAEAINQALGGNINALD-----KYTETINEEWGNQMMWAQKLAQIFYR 328
>gi|337285097|ref|YP_004624571.1| geranylgeranyl hydrogenase [Pyrococcus yayanosii CH1]
gi|334901031|gb|AEH25299.1| geranylgeranyl hydrogenase [Pyrococcus yayanosii CH1]
Length = 393
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 167/373 (44%), Gaps = 39/373 (10%)
Query: 66 AETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLD--IIDRKVTKMKMISPS 121
A +A+ G LI++K + K C I + + +FD+P D I+R++ ++ SPS
Sbjct: 18 ARNVARAGFSVLLIDKKAAIGTPKQCAEGISVNVFEQFDIPYDRRFINREIYGARLYSPS 77
Query: 122 NVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVL 180
+ L+ + G++ R+V D L A K GA V+ +D+ R
Sbjct: 78 GYTAE----LRYKKVSGVILERKVFDKMLAYYAAKAGADVL-ARTEALDVIRK------- 125
Query: 181 YYTEYDGTKGGV-----GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIP 235
DG G+ GE + D ++ ADG S +A+ AG YA +
Sbjct: 126 -----DGKIVGIKAKHEGELIEIYADIIVTADGVESTIARK--AGIDTYAPPHEFDSSYE 178
Query: 236 DEKMV--YYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVGTGTVTHKGDIKKFQLATRNR 292
E ++ Y +L ++ G++V+P Y WVFPK D VG G K+ L R
Sbjct: 179 YEMLIEGYDPDLIHLWFGNEVAPRGYVWVFPKDEDRANVGIGINADNPRTAKYYL-DRWL 237
Query: 293 AKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMC 351
++ I K++ + +P + L+ V +VGDAA V G G+ A K+G M
Sbjct: 238 KENNINAKKLLEINVGLVPVGGFVKELAKENVVVVGDAARQVNPMHGGGMAEAMKAGTMA 297
Query: 352 AEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR-SNPAREAFVEMC 410
A+ I+ E D G L+ Y ++W + P + L L++ + ++ + F+++
Sbjct: 298 AKWIVRALEEE----DIGLLQNYTKEWWEKEGPRMERLLKLRRATEKLTDEDLDLFIQLL 353
Query: 411 ADEYVQKMTFDSY 423
+ ++K+ +Y
Sbjct: 354 SGMDLEKLASGNY 366
>gi|329764852|ref|ZP_08256443.1| geranylgeranyl reductase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329138638|gb|EGG42883.1| geranylgeranyl reductase [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 405
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 153/349 (43%), Gaps = 43/349 (12%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLDI 107
N + V+GGGPAG + A AKNG++ L+E++ + G + + EF +P D
Sbjct: 6 NYDLVVVGGGPAGSSVAYEAAKNGIKVALLEKEETIAYSVRTSGVTWIESIKEFGIPDDC 65
Query: 108 IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK 167
+ + SP+N V I T+ PH + VR+ +L ++AEK+G + F+K
Sbjct: 66 YN-PIKNYSFCSPNN-EVTITDTI-PHAAVLDVRKTY--RWLAQQAEKHGTDI----FLK 116
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGV-GEKRTLEV----DAVIGADGANSRVAKSINAGDY 222
++ + DG GV G + EV VI A G +S V+KS+
Sbjct: 117 TNIKDVIKNK--------DGDIVGVSGTSKEGEVIFHSKVVIDASGFSSVVSKSMG---- 164
Query: 223 DYAIAFQERVKIPDEKMVYYENLAE----MYVGDDVSPDFYGWVFPKCDH---VAVGTGT 275
+ ER E V EN+ E + VG SP Y W+FP ++ + VG G
Sbjct: 165 --FVTQWERFGAGAEYEVKAENVDEETWWLMVGQKYSPAGYAWIFPVGNNIVRIGVGVGK 222
Query: 276 VTHKGD-IKKFQLATRNRAKDKILGGKIIRVEAH--PIPEHPRPRR-LSGRVALVGDAAG 331
D ++ + ++ GKI +E H IP R+ + + LVGD+AG
Sbjct: 223 PESAVDPTERLKELIDSKMGPISKLGKITPIEFHYGLIPNDGLTRKTVYNNLILVGDSAG 282
Query: 332 YVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDK 380
EGI +A K GR+ + E + G DE L Y E W K
Sbjct: 283 QANPLVLEGIRYAIKFGRIAGKIASEAIKFGKT--DEDALYAYEENWKK 329
>gi|452944001|ref|YP_007500166.1| geranylgeranyl reductase [Hydrogenobaculum sp. HO]
gi|452882419|gb|AGG15123.1| geranylgeranyl reductase [Hydrogenobaculum sp. HO]
Length = 348
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 134/311 (43%), Gaps = 30/311 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIP-LCMVGEF-DLPLDII 108
V +IGGG AG +AA LAK GV+ +++ + P C IP M +F D + +
Sbjct: 9 VLIIGGGLAGSSAAHQLAKKGVDVIIVDSRKTIGVPVQCAEFIPKQLMQKKFEDYFRNSV 68
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
+++ M I P N + + MV R+V DA + + A K+GA F+K
Sbjct: 69 VQEIENMLTIEPDN------RRVYSDSKGVMVDRKVFDANIFQEAIKSGARA----FLK- 117
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
++ +Y + + +E D +IGADG S V + + + ++ A+
Sbjct: 118 -------TIFIGFYDKNTAILKAKDDVYYVEFDYLIGADGPRSMVMEKVFSKKHELAVCA 170
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKF--Q 286
Q R ++ + E G YGW+FPK ++ VG G T D K+ +
Sbjct: 171 QRRCRLKEPLKDIVIVFREYIRGG------YGWIFPKNNYANVGIGIDTAFKDDPKYVLE 224
Query: 287 LATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAK 346
L ++ + +P +S VAL GDA G+ +G GI A
Sbjct: 225 LFIKDAVSMGFIENDCNESSGGFLPLDGIDTLVSSNVALCGDAGGFCHPITGGGIPQAVV 284
Query: 347 SGRMCAEAIIE 357
SG M A+ I+E
Sbjct: 285 SGNMLAQYILE 295
>gi|385808913|ref|YP_005845309.1| Dehydrogenase flavoprotein [Ignavibacterium album JCM 16511]
gi|383800961|gb|AFH48041.1| Dehydrogenase flavoprotein [Ignavibacterium album JCM 16511]
Length = 389
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 139/320 (43%), Gaps = 36/320 (11%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLD--II 108
+ V+G GPAG AA A+ GV ++E+ D P CG AI V EF +P D I
Sbjct: 7 IIVVGAGPAGSMAARFAAERGVSVLMLEKDRDVGYPVRCGEAISKAGVEEF-IPSDDKWI 65
Query: 109 DRKVTKMKMISP--SNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFM 166
+++K +P + V ++ G+ Y+ + R + D L A + GA +
Sbjct: 66 AARISKFSFNAPDGTEVIIEFGEA----GYV--LERRIFDYELARTAAEAGAEI------ 113
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGV-----GEKRTLEVDAVIGADGANSRVAKSINAGD 221
L R + +L + DG GV GE++ ++ VI ADG SRV +
Sbjct: 114 ---LTRAYVNGLIL---DNDGKVCGVKYEYNGEQKEIQSKIVIAADGVESRVGRWAGLKT 167
Query: 222 YDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKG 280
+ + V+I + +N Y G DV+P+ Y W+FPK + A +G G G
Sbjct: 168 HIDFRDMESAVQITAANIPVDQNTLYFYFGKDVAPNGYFWIFPKGHNKANIGLGVSGIIG 227
Query: 281 DIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSG-RVALVGDAAGYVTKCSGE 339
K Q + ++ A +P ++S + LVGDAA V SG
Sbjct: 228 KKKSAQSFLDDFMSKHYPNAPVLTKIAGGVPCSITLDKISAPGIMLVGDAARQVNPLSGG 287
Query: 340 GIYF----AAKSGRMCAEAI 355
GI + +GR+ AEAI
Sbjct: 288 GIASGMIGGSIAGRIAAEAI 307
>gi|319789217|ref|YP_004150850.1| geranylgeranyl reductase [Thermovibrio ammonificans HB-1]
gi|317113719|gb|ADU96209.1| geranylgeranyl reductase [Thermovibrio ammonificans HB-1]
Length = 371
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 161/392 (41%), Gaps = 55/392 (14%)
Query: 53 VAVIGGGPAGGAAAETLAKNG--VETFLIER-KLDNCKPC-GGAIPLC--MVGEFDLPLD 106
V V G GPAG L + ++ ++R + KPC GG P ++ E LD
Sbjct: 5 VIVSGLGPAGCTFLRELRRRNPDLKVLALDRAEFPRHKPCAGGLTPKAYRLLKELFPELD 64
Query: 107 -IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
+++R+V + K+ N V++ P+ + + +R+ LD L + A +N +
Sbjct: 65 TVVERRVNRFKLFF-KNREVELPS---PNPLVYLTKRKRLDHLLFKLATENTEVKLG--- 117
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
VL +Y +KRT +IGADG NSR+++
Sbjct: 118 -----------ETVLGAEKYKNGWKVKTDKRTYTTKLLIGADGVNSRLSRQFKV---KRE 163
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYG------WVFPKCDHVAVGTGTVTHK 279
I F V++ E + ++ DF G W FPK V G G +
Sbjct: 164 IGFTYEVEVEAEL-------------NHITIDFTGFKWGYYWAFPKEGSVTTGAGEF-KR 209
Query: 280 GDIKKFQLATRNRAKDKILGGKIIRVEAHPIPE-HPRPRRLSGRVALVGDAAGYVTKCSG 338
G+ KK + T + L G+ + PIP P G + +GDAAG V +G
Sbjct: 210 GNFKKLRELTTLLNRKHGLTGRNLWEGGFPIPAGRPECDVQRGPLLFLGDAAGLVDPLTG 269
Query: 339 EGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLE-----KWDKTY-WPTYKVLDVL 392
EGIY+AA+SG++ A A+ G + ++E +R E +W + W +K +
Sbjct: 270 EGIYYAARSGQIAAAAVSNFFSKGPKALEEYRVRINREFGGEFRWARVVGWLFFKFPSLN 329
Query: 393 QKVFYRSNPAREAFVEMCADEYVQKMTFDSYL 424
KV S + E+ E + F ++
Sbjct: 330 LKVVKNSPQLIKITAELLTGELPYRAAFLKFI 361
>gi|223477069|ref|YP_002581632.1| digeranylgeranylglycerophospholipid reductase [Thermococcus sp.
AM4]
gi|214032295|gb|EEB73125.1| Digeranylgeranylglycerophospholipid reductase [Thermococcus sp.
AM4]
Length = 395
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 171/391 (43%), Gaps = 47/391 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLD--II 108
V V+G G AG A +AK G +I++K + K C I + + ++D+P D I
Sbjct: 7 VVVVGAGIAGPIIARNVAKAGYSVLMIDKKWAIGTPKQCAEGISIKVFEKYDIPYDKRFI 66
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMK 167
+R++ K+ SPS ++ L+ + G++ R+V D L A K GA V+
Sbjct: 67 NREIYGAKLYSPSGYELE----LRYKDVSGVILERKVFDKMLAYYAAKAGADVL-ARTEA 121
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLE-----VDAVIGADGANSRVAKSINAGDY 222
+D+ R DG G+ K E D ++ ADG S +A+ AG
Sbjct: 122 LDVIRK------------DGKVAGIKAKHEDEPIEIYADVIVAADGVESTIARK--AGIN 167
Query: 223 DYAIAFQERVKIPDEKMV--YYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVGTGTVTHK 279
YA + E ++ Y +L ++ G++++P Y WVFPK D VG G +
Sbjct: 168 TYAPPHEFDSSYEYEMLIEGYDPDLIHLWFGNEIAPRGYVWVFPKDEDRANVGIGINSDN 227
Query: 280 GDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVTKCSG 338
K+ L + ++ I K++ V +P + L V +VGDAA V G
Sbjct: 228 PKTAKYYL-DKWLKENNIPAKKLLEVNVGVVPVGGFVKELVKDNVLVVGDAARQVNPMHG 286
Query: 339 EGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPT-----YKVLDVLQ 393
G+ A ++G + ++ I++ E D L+ + K +W T KVL V +
Sbjct: 287 GGMAEAMEAGTIASKWIVKALEE--------DNLSLLQNYTKEWWETDGKRLEKVLKVRK 338
Query: 394 KVFYRSNPAREAFVEMCADEYVQKMTFDSYL 424
++ + F+++ + +K+ Y+
Sbjct: 339 VTEKLTDEDLDLFIQVLSGADAEKIAGGDYV 369
>gi|325289025|ref|YP_004265206.1| geranylgeranyl reductase [Syntrophobotulus glycolicus DSM 8271]
gi|324964426|gb|ADY55205.1| geranylgeranyl reductase [Syntrophobotulus glycolicus DSM 8271]
Length = 397
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 145/338 (42%), Gaps = 28/338 (8%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIE--RKLDNCKPCGGAIPLCMVGEFDLPLDI 107
N VIGGGPAG A +AK G + + E RK+ C G + + +P +
Sbjct: 2 NYDAIVIGGGPAGCETARLMAKKGYQVMVAEEHRKIGEPIQCAGLVSRRTLQAAAIPAGL 61
Query: 108 IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK 167
I ++ + SP + I Y ++ R D L +RA+ GA ++ G
Sbjct: 62 IMNQINGAFVHSPGGEVLSIKDK---EAYAFVIDRSEFDRKLSKRAQAAGAEILTGCRAS 118
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIA 227
+ + P G G + T+ +IGADGANS+VA+ INA D +A
Sbjct: 119 V----SGLSPEGARVRLRSG-----GTETTVRTRLLIGADGANSQVARRINAPAADGVVA 169
Query: 228 F---QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKGDIK 283
+ +K +++MV+ +++G ++P ++GWV P + A VG G V+ +G
Sbjct: 170 MCAAEVELKCREKEMVH------IFLGRGIAPGWFGWVIPVDETRARVGIG-VSGRGKNP 222
Query: 284 KFQLATRNRAKDKILGG-KIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIY 342
+ + G KIIR +P R + R LVGDAA SG G+Y
Sbjct: 223 AYYFQHMVDTWPGLFQGMKIIRNTGGAVPIGLLSRIYAERTMLVGDAACQTKPISGGGLY 282
Query: 343 FAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDK 380
+CA+ ++ G + L +Y W+K
Sbjct: 283 LGLLGAGLCAKVAVQALSQGN--LSAEFLAEYQRLWEK 318
>gi|113474693|ref|YP_720754.1| geranylgeranyl reductase [Trichodesmium erythraeum IMS101]
gi|110165741|gb|ABG50281.1| geranylgeranyl reductase [Trichodesmium erythraeum IMS101]
Length = 370
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 142/332 (42%), Gaps = 30/332 (9%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLD-IIDRKV 112
++G GPAG +AA LAKNG ++E++ L KPCGG + + FD I K+
Sbjct: 6 IVGSGPAGASAAYHLAKNGRSVLVLEKETLPRYKPCGGGVSPIVQEWFDFDFTPAISLKI 65
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLP 171
+ V++ L+ + I MVRRE+ D ++ ++A+K GA + + + ++
Sbjct: 66 NSICYTWKKGDLVEV--KLQNKQPIWMVRREIFDYFIIQKAQKQGAEIRDKTRVIGIEFK 123
Query: 172 RNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQER 231
N Q Y + ++ +I ADGA +AK + +
Sbjct: 124 NNNWQVYT--------------DNQSFTSPYLIAADGAKGSMAKWLGFKNRKRFAGGAME 169
Query: 232 VKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRN 291
++IP V + + Y + + Y W FPK D ++G GT K L T
Sbjct: 170 IEIP----VKNQKIDSAYFEFGMLNNGYVWNFPKADGYSIGVGTFWRKHGQNFTALLTEY 225
Query: 292 RAKDKILGGKIIRVE--AHPIPEHPRPRRLSGRVA-LVGDAAGYVTKCSGEGIYFAAKSG 348
+ ++ I V+ HP+ ++L + A L G+AA V + EGI + +G
Sbjct: 226 TSMFEV---NIQNVQKFGHPLCLWNGNQKLHTQNAVLAGEAACIVDPFTAEGIRPSIFTG 282
Query: 349 RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDK 380
A A I S NG E + E+W K
Sbjct: 283 VKAARA-IHNSLNGDLFALEKYTQIINEEWGK 313
>gi|1890201|emb|CAA70994.1| hypothetical protein [Methanosarcina barkeri]
Length = 282
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 132/302 (43%), Gaps = 28/302 (9%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
++ + V +IG GPAG AA LAK+ + +I++ KPC G + FD P
Sbjct: 2 ISMKKYDVVIIGAGPAGSYAAYMLAKSKINVLVIDKYSFPRYKPCAGGLTAKAFNSFDFP 61
Query: 105 LDIIDRKVTKMKMISPSNVAVDIGQTLKPHE-YIGMVRREVLDAYLRERAEKNGASVING 163
+ + T + S N I + ++ + M+ R+ D +L ++A +GA+ ++G
Sbjct: 62 ISKEVKYSTNSIVTSYKN---QIFHNISGNKTLVKMIERKEFDDFLIKKAVDSGATFLDG 118
Query: 164 LFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYD 223
+ + N E + + +IGADG N V ++ N + D
Sbjct: 119 MKVTEITWENAEFSIKT-------------DSEFFRCNYLIGADGTNGIVNRTFNIVERD 165
Query: 224 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVS--PDFYGWVFPKCDHVAVGTGTVTHKGD 281
F + P + +N+ + + D P+ Y W+FPK ++V VG T K
Sbjct: 166 -LYGFAVEINCPVSR----DNIGKFNMTFDFGTVPNGYLWIFPKDEYVCVGAYTTNRK-- 218
Query: 282 IKKFQLATRNRAKDKILGGKIIRVEAHPIPEHP-RPRRLSGRVALVGDAAGYVTKCSGEG 340
+K Q + + L + +++ H IP + ++ LVGDAAG+ +GEG
Sbjct: 219 MKNIQKYLLDYIEKLGLIPESEKLKGHIIPYYGINYKQPDFPCVLVGDAAGFGEYWTGEG 278
Query: 341 IY 342
IY
Sbjct: 279 IY 280
>gi|357040768|ref|ZP_09102552.1| geranylgeranyl reductase [Desulfotomaculum gibsoniae DSM 7213]
gi|355356065|gb|EHG03861.1| geranylgeranyl reductase [Desulfotomaculum gibsoniae DSM 7213]
Length = 396
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 146/337 (43%), Gaps = 32/337 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIE--RKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
V VIGGGPAG A +A+ G + E RK+ C G + + +P II
Sbjct: 5 VIVIGGGPAGCETARIIAEKGYRVLIAEEHRKIGEPMQCAGLVSPRTLKIAAMPDAIIIN 64
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
++ + SP + I Y ++ R D L +RAE GA ++ G+
Sbjct: 65 QIHGAFVHSPGGEVLPIRDK---EAYALVIDRSEFDRNLSQRAEGAGAKIMTGV------ 115
Query: 171 PRNFEQPYV--LYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAI-- 226
+ +V ++ E G + T +IGADGANS VA+ IN + I
Sbjct: 116 -----RAWVGDIFPDETSVKFKSFGGEFTARARLLIGADGANSHVARRINIPTPNEVIRM 170
Query: 227 -AFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKGDIKK 284
A + +K ++ MV+ +++G +++P ++GWV P + A VG G V+ + K
Sbjct: 171 CAAEVELKCSEKDMVH------IFLGREIAPGWFGWVIPVDEKRARVGIG-VSGRDKHPK 223
Query: 285 FQLATRNRAKDKILGG-KIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYF 343
+ A +I G +R +P PR S R LVGDAA SG G+Y
Sbjct: 224 YYFNRMVEAHPEIFKGMNFLRSTGGVVPIGMFPRIYSERTLLVGDAACQTKPISGGGLYL 283
Query: 344 AAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDK 380
++CA+ + NG + L +Y W++
Sbjct: 284 GLLGAKLCAKVAAKAFSNGN--LSSEFLSEYQWLWER 318
>gi|125569827|gb|EAZ11342.1| hypothetical protein OsJ_01210 [Oryza sativa Japonica Group]
Length = 275
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 48/68 (70%)
Query: 393 QKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANA 452
Q+VFY N REA VEMCADE+VQ+ TFDSYL+KR+ P P DL+L T ++VR
Sbjct: 193 QRVFYGGNAGREALVEMCADEHVQRRTFDSYLHKRMAPAEPWGDLRLLWRTAAAMVRCGV 252
Query: 453 LRREMDKL 460
L RE+++L
Sbjct: 253 LGREVERL 260
>gi|119356884|ref|YP_911528.1| geranylgeranyl reductase [Chlorobium phaeobacteroides DSM 266]
gi|119354233|gb|ABL65104.1| geranylgeranyl reductase [Chlorobium phaeobacteroides DSM 266]
Length = 385
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 135/311 (43%), Gaps = 47/311 (15%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERKL-DNCKPCGGAIPLCMVGEFDLPLDIIDRKVT 113
V G GP+G AAA TLAKNG++ ++++ + K CGG + F LD+ D
Sbjct: 9 VAGAGPSGTAAAYTLAKNGIDVCIVDKAIFPREKLCGGGLTRRTKNSF---LDVFDLNWE 65
Query: 114 KMKMISPSNVAVDI-GQTLKPHEYIG---MVRREVLDAYLRERAEKNGASVINGLFMKMD 169
M S ++ G + E G R + D L ++A G V+ G ++D
Sbjct: 66 DMYEYSANSALFYYKGHVINKIEDYGELYFCDRIMFDNRLLDQATSRGVDVVPG--ERVD 123
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS-----INAGDYDY 224
+ E+ L R + +IGADG NS VA+ IN Y Y
Sbjct: 124 VIDTVEKTCKL------------ASGRQIRYRYLIGADGVNSVVARQFVSRRINRNRYAY 171
Query: 225 AIAFQERVKIPDEKMVYYE-NLAEMYVGDDVSPDFYGWVFPKCDHVAVG-----TGTVTH 278
A+ +V I + E E+Y GD YGWVFPK + VG + TV
Sbjct: 172 AL----QVDIHKDDYGKKELTRPELYFGDVAMG--YGWVFPKRNSYTVGICSRYSKTVDA 225
Query: 279 KGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVTKCS 337
+ + F A RN A K R++ H IP R+ + LVGDAAG V +
Sbjct: 226 RKKMMDF-FADRNGAPFKG------RLKGHYIPFGNYAERVVENDMILVGDAAGLVDPVT 278
Query: 338 GEGIYFAAKSG 348
GEGI +A +SG
Sbjct: 279 GEGIAYAIESG 289
>gi|84490095|ref|YP_448327.1| dehydrogenase [Methanosphaera stadtmanae DSM 3091]
gi|121717104|sp|Q2NER9.1|GGR3_METST RecName: Full=Digeranylgeranylglycerophospholipid reductase 3;
Short=DGGGPL reductase 3; AltName:
Full=2,3-di-O-geranylgeranylglyceryl phosphate reductase
3; AltName: Full=Geranylgeranyl reductase 3; Short=GGR 3
gi|84373414|gb|ABC57684.1| predicted dehydrogenase [Methanosphaera stadtmanae DSM 3091]
Length = 397
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 176/407 (43%), Gaps = 34/407 (8%)
Query: 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLD 106
+ + V +IG GPAG AA +KNG +T +I++K + P C I ++ + D
Sbjct: 4 KEVDVLIIGAGPAGSLAAREASKNGAKTLIIDKKSEIGTPKRCAEGIMSGVLERVHITPD 63
Query: 107 --IIDRKVTKMKMISPSNVAVDIG-QTLKPHEYIGMVRREVLDAYLRERAEKNGASVI-- 161
I RK+ +++SP+N + +TL+ ++ R+V D ++ A + GA V+
Sbjct: 64 ERWIARKIDGARIVSPNNTSAWFTPETLETPATGIILERKVFDKHMTMDAIREGAEVMIK 123
Query: 162 -NGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAG 220
L MK + + + EY+ K + VIGADG VA+
Sbjct: 124 TEALSMKRE-GDGYLVDIKSFNKEYNQIKAHI----------VIGADGPEGHVARWAELN 172
Query: 221 DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVG---TGTV 276
+ ++ + N + V+P Y W+FPK D VG +G
Sbjct: 173 TKVPLAEMESGLQYEMTNLKMKNNSVIQFFFGSVAPGGYAWIFPKGYDTANVGIDISGIK 232
Query: 277 THKGDIKKFQ--LATRNRAKDKILGGKIIRVEAHPIPE-HPRPRRLSGRVALVGDAAGYV 333
K +K +A + KD G+I+ + A P + ++ V LVGDAAG V
Sbjct: 233 AEKSAVKYLNDFIANCDETKD----GQIVEINAGGNPLCGIFDKIITDNVMLVGDAAGCV 288
Query: 334 TKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQ 393
+ +G GI A +SG + + +N R E L++Y + D +K ++
Sbjct: 289 SPITGGGIDTALESGMIAGRVAAKAIKN--RDYSEEKLQEYADYIDSHLGKKFKKYIAIR 346
Query: 394 KVFYRSNPAR-EAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKL 439
V Y S+ + ++ A+ + K++ S L K V+ +P + KL
Sbjct: 347 DVLYNSSDEDLDEYITALANANITKLSTKS-LIKVVMKISPRKLFKL 392
>gi|410720333|ref|ZP_11359689.1| geranylgeranyl reductase family protein [Methanobacterium sp.
Maddingley MBC34]
gi|410601115|gb|EKQ55635.1| geranylgeranyl reductase family protein [Methanobacterium sp.
Maddingley MBC34]
Length = 392
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 149/360 (41%), Gaps = 44/360 (12%)
Query: 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLD 106
+N VAV+G GP G A +A+ G E ++E+K + P C G + + LP +
Sbjct: 2 KNYDVAVVGAGPVGSTFARHMAEKGFEVAILEKKREIGVPLQCAGLLGKKIKKVNILPDE 61
Query: 107 IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFM 166
I V + SP + + + + KP Y+ V R D +L + A +GA LF+
Sbjct: 62 FIINPVNGAFLHSPEDTVLSVSKE-KPEAYV--VDRIGYDKFLAQIALDSGAE----LFL 114
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGV----GEKRTLEVDAVIGADGANSRVAKSINAGDY 222
+ D KG + E + D V+GADG +S V+ + N
Sbjct: 115 NHRVEN------------VDSVKGVITLKNNENTKISADIVVGADGHSSIVSNTFNPPAE 162
Query: 223 DYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA----VGTGTVTH 278
+ A Q + + +++ + EN +YV VSP F W P + A
Sbjct: 163 SFQAA-QYLIDVGEKR--FQENYVHLYVDSRVSPGFL-WAIPLSESTARVGLFADANYQQ 218
Query: 279 KGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEH-PRPRRLSGRVALVGDAAGYVTKCS 337
I LA R+ K G I++ IP+H P+ + + +V L+GDAA V +
Sbjct: 219 LTIILNELLAKRSELK----GATILKKYYGVIPKHNPQKQLVKNKVILLGDAASQVKPTT 274
Query: 338 GEGIYFAAKSGRMCAEAIIEGSEN-GTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVF 396
G G+ + ++ + EN T M L Y + + + KV ++ K+F
Sbjct: 275 GGGLIMGFACAEIASKVAAKALENESTEM-----LMNYYKDYQNQFKNELKVQLMVHKIF 329
>gi|134046277|ref|YP_001097762.1| geranylgeranyl reductase [Methanococcus maripaludis C5]
gi|209572862|sp|A4FZB4.1|GGR_METM5 RecName: Full=Digeranylgeranylglycerophospholipid reductase;
Short=DGGGPL reductase; AltName:
Full=2,3-di-O-geranylgeranylglyceryl phosphate
reductase; AltName: Full=Geranylgeranyl reductase;
Short=GGR
gi|132663902|gb|ABO35548.1| 2,3-di-O-geranylgeranylglyceryl phosphate reductase [Methanococcus
maripaludis C5]
Length = 390
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 165/368 (44%), Gaps = 45/368 (12%)
Query: 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPL 105
N + V V+G GPAG A+ +KNG +T L+E+ + P C A+P + +F +
Sbjct: 5 NNSYDVVVVGAGPAGSMASYNASKNGAKTLLLEKSQEIGTPVRCAEAVP--RLEDFGINP 62
Query: 106 D--IIDRKVTKMKMISPS--NVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV- 160
D + + +I+P+ V V G+T Y+ V R+V D YL R+ + G +
Sbjct: 63 DPSFVRSYIKGGYLIAPNGKQVVVKGGKT---DGYV--VERKVFDKYLAIRSGQAGTQIA 117
Query: 161 INGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVA-----K 215
+ ++ + +V Y +G++ ++ VI ADG S +A K
Sbjct: 118 VKSRVTGIEKTDDGYNVFVNY----------LGDEYIVKTKIVIAADGVESNIAEYAGLK 167
Query: 216 SINAGDYDYAIAFQE--RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGT 273
S + + A E VK+ D +M+ E Y G D+ P Y W+FPK D V VG
Sbjct: 168 SKKSHKEICSCAEYEMTNVKLLDNEMM------EFYFG-DICPKGYIWLFPKGDTVNVGI 220
Query: 274 GTVTHKGDIKKF--QLATRNRAKDKILGGKII--RVEAHPIPEHPRPRRLSGRVALVGDA 329
G + K + + T K ++ + +V P+ P + ++ + +VGDA
Sbjct: 221 GIIDSKKRAIDYLDEFLTNPLVKGRLDNAVPVEFKVGGDPVG-GPIEKTVADNIMVVGDA 279
Query: 330 AGYVTKCSGEGIYFAAKSGRMCAEAIIEG--SENGTRMIDEGDLRKYLEKWDKTYWPTYK 387
AG+V+ +G GI + G M + + +E+ +R +++ EK+ K K
Sbjct: 280 AGHVSPLTGGGIGLSMSCGLMAGDVAAQSIKAEDHSREFLSAYEKRWKEKYYKPLMKDLK 339
Query: 388 VLDVLQKV 395
+LQK+
Sbjct: 340 YKTILQKL 347
>gi|147669341|ref|YP_001214159.1| FAD dependent oxidoreductase [Dehalococcoides sp. BAV1]
gi|146270289|gb|ABQ17281.1| FAD dependent oxidoreductase [Dehalococcoides sp. BAV1]
Length = 393
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 141/342 (41%), Gaps = 35/342 (10%)
Query: 44 PKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEF 101
P N V VIG GP G A+ LA+ G E L+E+K + K C G I ++
Sbjct: 10 PDNVTMNTDVLVIGAGPVGLHTAKCLAECGYEVRLLEKKPEAAKQVCCTGIISTECASKY 69
Query: 102 DLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVI 161
I ++ + SP +GQ L +++R+ A + +RA +
Sbjct: 70 GFDGKYIQNYFSEASVYSP------VGQKL-------LLKRDTPQAIMLDRASFQAKLLQ 116
Query: 162 NGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGD 221
+ + F+ + Y +G + E ++ AV+ A G N+ ++++ G+
Sbjct: 117 QAINCGVRTSFGFQANSIEYIE--NGLRITTKEGQSFTAKAVVLAAGYNTALSRATGLGE 174
Query: 222 YD-YAIAFQERV--KIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTH 278
+ +A Q V IP NL+ ++ G +S ++GW+ P D A G +T
Sbjct: 175 INNFAYGLQAEVDTSIP-------ANLS-LFTGKAISQGYFGWLSPINDCTA-KMGLLTR 225
Query: 279 KGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSG 338
K + + K ++ K I P+P RV VGD AG + +G
Sbjct: 226 KNPFECWSALHNTLYKQGLITAKHINYVCRPVPIGNLSASFGDRVLAVGDFAGQLKPTTG 285
Query: 339 EGIYFAAKSGRMCAEAIIEGSENG--TRMIDEGDLRKYLEKW 378
GIYF G +CA+ + + T I + +L +Y + W
Sbjct: 286 GGIYF----GLLCADLAVSCLDKNIKTNKISKANLAEYEKNW 323
>gi|383319333|ref|YP_005380174.1| 2,3-di-O-geranylgeranylglyceryl phosphate reductase [Methanocella
conradii HZ254]
gi|379320703|gb|AFC99655.1| 2,3-di-O-geranylgeranylglyceryl phosphate reductase [Methanocella
conradii HZ254]
Length = 392
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 167/381 (43%), Gaps = 46/381 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-----NCKPCGGAIPLCMVGEFDLPLDI 107
V V+G GPAG AA T A++G++ LIE++ + C G + L D
Sbjct: 7 VIVVGAGPAGSIAARTAAEHGLDVLLIEKRQEIGDPVRCAEGTGKVGLTQF--MDPDPRW 64
Query: 108 IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK 167
I +VT ++ +P +++ + L E ++ R++ D + + A K GA V
Sbjct: 65 ICAEVTGARIFAPDGTCIELSEKLAGKEVGYVLERKIFDRAVAKTAAKAGAEV------- 117
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDA----VIGADGANSRVAK--SINAG 220
+ Q L +GT G+ G+ R + +A V+GADG S+V K IN
Sbjct: 118 ----QVKTQATSLIIE--NGTVCGIRGKHRGDDFEARAKVVVGADGIESKVGKWAGINTT 171
Query: 221 DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHK 279
I + + D + + + Y+G++ +P Y WVFPK A VG G + +
Sbjct: 172 LKPKDIETCAQFLVTDIDI--KADSCDFYLGNERAPGGYVWVFPKGKREANVGLGMLGSR 229
Query: 280 GDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSG 338
K R + GK+I +P ++LS G + LVGDA +G
Sbjct: 230 FTGKHPIDYLREFMAWRFPQGKVIETVVGAVPASGMLKQLSTGGLVLVGDAGRVSDPITG 289
Query: 339 EGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLR-KYLEKWDKTYWPTYKVLDVLQKVFY 397
GIY SGR+ I + I GD+ K L+++D+ +V + L K+
Sbjct: 290 GGIYNGMVSGRIAGNVIADA-------IKSGDVSAKRLQRYDR------EVRETLGKMLD 336
Query: 398 RSNPAREAFVEMCADEYVQKM 418
R+ A+E FV +DE + +
Sbjct: 337 RNYKAKE-FVVKTSDEVMNSV 356
>gi|452210421|ref|YP_007490535.1| Geranylgeranyl diphosphate reductase [Methanosarcina mazei Tuc01]
gi|452100323|gb|AGF97263.1| Geranylgeranyl diphosphate reductase [Methanosarcina mazei Tuc01]
Length = 389
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 166/372 (44%), Gaps = 46/372 (12%)
Query: 71 KNGVETFLIERK-LDNCKPCGGAIP----LCMVGEFDLPLDIIDRKVTKMKMISPSNVAV 125
K G+ T LIE++ KPCGGA+ C+ +F LP +I++ ++++++ +
Sbjct: 22 KAGISTLLIEKENFPRYKPCGGALSPYALSCL--DFKLPEYLIEKDISRIRV----HFRE 75
Query: 126 DIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEY 185
+ K + +V R+ D +L ++A + G + +G VL E
Sbjct: 76 LCTEMQKDYSIALLVSRKAFDNFLLDKARETGIDIHSG-------------EKVLDCEEG 122
Query: 186 DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINA-----GDYDYAIAFQ--ERVKIPDEK 238
+ + T V+ A+G+ + S+ +YD A+ + ER K+ ++
Sbjct: 123 EECVEVRTSQNTYLAKFVLIAEGSEGVLKYSVRKRKDRRTEYDLALVSEIPERDKVIRKR 182
Query: 239 MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVG-TGTVTHKGDIKKFQLATRNRAKDKI 297
+ N +M+ G ++ YGW+FP +H +VG GT H +K + ++ +
Sbjct: 183 ---FPNAIDMHFG--IASGGYGWIFPHSEHYSVGIVGTAEH---LKHPKAVMQDFLQANG 234
Query: 298 LGGKIIRVEAHPIPEHPRPRR-LSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAII 356
G +V +H IP R+ +S R+ L GDAAG+V GEGI +A +SG++ AE +
Sbjct: 235 FSGDF-QVHSHIIPVGGIKRKTISSRILLSGDAAGFVDAFIGEGISYAIRSGQLAAENVA 293
Query: 357 EGSENGTRMID----EGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCAD 412
E ++ D E RK + + K + + +R +R+ ++ +
Sbjct: 294 EIVLYNRKLSDLKEYETSCRKEFGNFLSSSLKLEKAMHRFPETSFRLALSRKEIIDKYLE 353
Query: 413 EYVQKMTFDSYL 424
E V + Y+
Sbjct: 354 EVVINRSHKDYV 365
>gi|21227951|ref|NP_633873.1| geranylgeranyl reductase [Methanosarcina mazei Go1]
gi|20906374|gb|AAM31545.1| Geranylgeranyl reductase [Methanosarcina mazei Go1]
Length = 402
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 166/372 (44%), Gaps = 46/372 (12%)
Query: 71 KNGVETFLIERK-LDNCKPCGGAIP----LCMVGEFDLPLDIIDRKVTKMKMISPSNVAV 125
K G+ T LIE++ KPCGGA+ C+ +F LP +I++ ++++++ +
Sbjct: 35 KAGISTLLIEKENFPRYKPCGGALSPYALSCL--DFKLPEYLIEKDISRIRV----HFRE 88
Query: 126 DIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEY 185
+ K + +V R+ D +L ++A + G + +G VL E
Sbjct: 89 LCTEMQKDYSIALLVSRKAFDNFLLDKARETGIDIHSG-------------EKVLDCEEG 135
Query: 186 DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINA-----GDYDYAIAFQ--ERVKIPDEK 238
+ + T V+ A+G+ + S+ +YD A+ + ER K+ ++
Sbjct: 136 EECVEVRTSQNTYLAKFVLIAEGSEGVLKYSVRKRKDRRTEYDLALVSEIPERDKVIRKR 195
Query: 239 MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVG-TGTVTHKGDIKKFQLATRNRAKDKI 297
+ N +M+ G ++ YGW+FP +H +VG GT H +K + ++ +
Sbjct: 196 ---FPNAIDMHFG--IASGGYGWIFPHSEHYSVGIVGTAEH---LKHPKAVMQDFLQANG 247
Query: 298 LGGKIIRVEAHPIPEHPRPRR-LSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAII 356
G +V +H IP R+ +S R+ L GDAAG+V GEGI +A +SG++ AE +
Sbjct: 248 FSGDF-QVHSHIIPVGGIKRKTISSRILLSGDAAGFVDAFIGEGISYAIRSGQLAAENVA 306
Query: 357 EGSENGTRMID----EGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCAD 412
E ++ D E RK + + K + + +R +R+ ++ +
Sbjct: 307 EIVLYNRKLSDLKEYETSCRKEFGNFLSSSLKLEKAMHRFPETSFRLALSRKEIIDKYLE 366
Query: 413 EYVQKMTFDSYL 424
E V + Y+
Sbjct: 367 EVVINRSHKDYV 378
>gi|268325232|emb|CBH38820.1| conserved hypothetical protein containing FAD binding domain
[uncultured archaeon]
Length = 408
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 143/353 (40%), Gaps = 66/353 (18%)
Query: 59 GPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGE----------FDLPLD 106
GPAG AA+ AK G T +IE + KP C G I + E ++
Sbjct: 14 GPAGCMAAKYAAKTGASTLIIEADTEIGKPVQCAGLISKRAIEESETKDKSFINCEIKGA 73
Query: 107 IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFM 166
I+ + ++ + SP A I RR++ D L E A+K GA +I +
Sbjct: 74 IVRSQSQELMLESPDKSAFAI-------------RRDIFDTILAEEAQKEGAEIILRRRV 120
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAI 226
K + + + +L T K + VIGADG S+VAK A
Sbjct: 121 K-SVTKGAGETKLLIST--------ANGKEEISARVVIGADGVKSKVAK---MAGLSVAK 168
Query: 227 AFQERVKIPD--EKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDI-- 282
+F V++ E + + AE++VG+ ++P F+ W P +G + G
Sbjct: 169 SFLNCVQVEGVYETEDAFADFAEIFVGNSIAPGFFAWAIP------LGAENIARIGLCID 222
Query: 283 KKFQLAT-------RNRAKDKILG----GKIIRVEAHPIP----EHPRPRRLSGRVALVG 327
K+F + RN A+ IL G + A IP + R R+ + LVG
Sbjct: 223 KRFSAQSNPLLYLKRNLAEHPILAKRYKGARSKFTAGTIPIGVQKRGRTVRVDKGILLVG 282
Query: 328 DAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDK 380
DAA V +G G+Y+ K G+M E + S G D L Y +W K
Sbjct: 283 DAAAQVKPVTGGGVYYGMKCGKMAGEIAAKASLTG----DLKMLTAYERQWRK 331
>gi|410867158|ref|YP_006981769.1| Geranylgeranyl reductase family protein [Propionibacterium
acidipropionici ATCC 4875]
gi|410823799|gb|AFV90414.1| Geranylgeranyl reductase family protein [Propionibacterium
acidipropionici ATCC 4875]
Length = 432
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 143/337 (42%), Gaps = 43/337 (12%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERKL-DNCKPCG-GAIPLCMVGEFDLPLDIIDR-- 110
++G GP G A A LA+ G+ L+E+ + K CG G P + L +D+ +
Sbjct: 22 IVGAGPGGSATAAHLARRGLHVTLLEKAVFPRDKICGDGLTPRAVKQLIRLGIDVSEEAG 81
Query: 111 -KVTKMKMISPSNVAVDIGQTLKPHEY--IGMV-RREVLDAYLRERAEKNGASVINGLFM 166
K T+ I + + EY GMV RR VLD +L E A GA +I G
Sbjct: 82 WKHTRGLRIHGGTIPSFVMPWPDLAEYPGFGMVCRRSVLDQFLAEHAASQGAELITGA-- 139
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGVGEK--RTLEVDAVIGADGANSRVAKSINAG---D 221
N +P + T+ GV K R V+ ADG +SR+A + D
Sbjct: 140 ------NVTEPVIDGRTD---RIAGVRTKDGRVFRAPVVVAADGVSSRLATRMGLQRRED 190
Query: 222 YDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDF---YGWVFPKCD-HVAVGTGTVT 277
+A + + P Y ++ E++ G D YGW FP+ D V VG G +
Sbjct: 191 RPMGVAVRTYFRSPRSDDDYLDSWLELWDGRPHESDLLPGYGWAFPEGDGTVNVGLGMLD 250
Query: 278 -----HKGDIKKFQLATRNRAKDKILGGKI-------IRVEAHPIPEHPRPRRLSGRVAL 325
HK D + L TR G IR A P+ + +P G + L
Sbjct: 251 SSDAFHKTDYRA--LMTRWLRHTPPEWGFTEENQEGPIRGAALPMAFNRQPAYHRG-LFL 307
Query: 326 VGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENG 362
VGD+ G V +GEGI +A ++G + A+AI E G
Sbjct: 308 VGDSGGMVNPFNGEGIDYAMEAGELAADAIAEAHYRG 344
>gi|147919734|ref|YP_686520.1| putative geranylgeranyl reductase [Methanocella arvoryzae MRE50]
gi|121685372|sp|Q0W349.1|GGR_UNCMA RecName: Full=Digeranylgeranylglycerophospholipid reductase;
Short=DGGGPL reductase; AltName:
Full=2,3-di-O-geranylgeranylglyceryl phosphate
reductase; AltName: Full=Geranylgeranyl reductase;
Short=GGR
gi|110621916|emb|CAJ37194.1| putative geranylgeranyl reductase [Methanocella arvoryzae MRE50]
Length = 392
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 149/360 (41%), Gaps = 35/360 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLP-LDIID 109
V V+G GP G AA+T A+ G++ LIE++ + P C + + EF P I
Sbjct: 7 VIVVGAGPGGSLAAKTAAEQGLDVLLIEKRQEIGDPVRCAEGVGKAGLQEFVEPDPKWIS 66
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
+ ++ SP V++ + + +E ++ R++ D L + A K GA V
Sbjct: 67 ADIKCARIFSPDGTMVELSEKMAGNEVGFVLERKIFDRELAKMAAKAGAEV--------- 117
Query: 170 LPRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADGANSRVAK--SINAGDYDYAI 226
+ ++ + G G G++ T V+ ADG S+V + IN I
Sbjct: 118 QVKTQATGLIIENGQVCGITGKRHGDEFTARAKVVVAADGVESKVGRWAGINTTLKMKDI 177
Query: 227 AFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKGDIKKF 285
+ + D + N + Y+G +P Y WVFPK D A VG G + K
Sbjct: 178 ETCAQFLMTDINI--KPNSCDFYLGSKYAPGGYVWVFPKGDREANVGLGMLASHYKGKHP 235
Query: 286 QLATRNRAKDKILGGKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
R DK GKI+ +P P+ +G + LVGDA +G GI A
Sbjct: 236 IEYLREFVADKFPEGKILETVVGAVPVSGMLPKLSTGGLVLVGDAGHVSDPITGGGIINA 295
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLR-KYLEKWD--------KTYWPTYKVLDVLQKV 395
SGR+ I I GD+ K L ++D K+ YK+ +V+ KV
Sbjct: 296 MSSGRIAGNII-------ANCIRAGDVSAKALSRYDAEVREALGKSLDKNYKIKEVVTKV 348
>gi|296268271|ref|YP_003650903.1| geranylgeranyl reductase [Thermobispora bispora DSM 43833]
gi|296091058|gb|ADG87010.1| geranylgeranyl reductase [Thermobispora bispora DSM 43833]
Length = 424
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 141/334 (42%), Gaps = 45/334 (13%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCG-GAIP------LCMVGEFDLP 104
V V+G GPAG AA LAK G++ L+E+ + K CG G P + M + D P
Sbjct: 16 VIVVGAGPAGSTAAFYLAKAGLDVLLLEKTRFPREKVCGDGLTPRSVKELVAMGVDIDAP 75
Query: 105 LDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNGASVING 163
I +R + + +D Q L + G+VR R D L AE+ GA ++
Sbjct: 76 GWIRNRGLRVYG--AGLRFELDWPQ-LTSYPDFGLVRTRADFDEILARHAERAGARLLE- 131
Query: 164 LFMKMDLPRNFEQPYVLYYTEYDG------TKGGVGEKRTLEVDAVIGADGANSRVAKSI 217
N P + E G KG G +T VI ADG +SR++ ++
Sbjct: 132 -------ETNVTGPVL---DERSGRITGVTAKGADGAPQTFRAPLVIAADGNSSRLSIAM 181
Query: 218 NA---GDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGT 273
D +A + + P Y E E++ GD + P YGW+F D VG
Sbjct: 182 GLHKRADRPMGVAVRTYFRSPRHDDDYLETWLELWDGDRLLPG-YGWIFGVGDGTCNVGV 240
Query: 274 GTVTHKGDIKKFQLATRNRAKDKILGGKI----------IRVEAHPIPEHPRPRRLSGRV 323
G + K R K + + IR A P+ + +P G +
Sbjct: 241 GLLNTSAAFKNVDYRDLLRRWVKGMPAEWGFTEENMTAPIRGAALPMAFNRQPAYRRG-L 299
Query: 324 ALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIE 357
LVGDAAG V +GEGI +A +GR+ AE I++
Sbjct: 300 LLVGDAAGAVNPFNGEGIAYAMATGRIAAETIVQ 333
>gi|440794078|gb|ELR15249.1| geranylgeranyl reductase subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 535
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 172/409 (42%), Gaps = 56/409 (13%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIE-RKLDNCKPCGGAIPLCMVGEFD-------LP 104
V V+G GP+G A LAK G LI+ ++ + K CG +P + +
Sbjct: 149 VCVVGAGPSGATCAYHLAKAGHSVILIDSQRFPHDKVCGDVVPPLAQKHLEEMGVLQQIV 208
Query: 105 LDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
L+ R +SPS ++ IG+ L E + V+R +LD + AE GA++++G
Sbjct: 209 LEKEGRWGNSGGFVSPSGLSF-IGK-LTTGERLLSVQRIILDEKIAYAAESAGATLLDGF 266
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDY 224
+K + N E +T T GE A++ DGA S +A+ + AG + +
Sbjct: 267 TVK-SVKWNPEDE---LWTIVLDTMDTHGENYVYRARALVACDGAKSEIARQLGAGTHAF 322
Query: 225 A----IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKG 280
++F +P +V++E DF C + T KG
Sbjct: 323 PAADHVSFYSEQLLPGFFVVFHE-----------LEDF----LNMCCYFIPLPSTSRWKG 367
Query: 281 -DIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSG-------RVALVGDAAGY 332
+++ Q A + + + + + P P R+ G +VGDAAG
Sbjct: 368 RTVEELQEAYSDYMETDPYIKQALGPDVAVTPCKFAPMRVGGVSRSYGNHFLVVGDAAGQ 427
Query: 333 VTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKT----YWPTYKV 388
V +G GI+FA ++ ++ AE ++E G + G L+ Y ++W K +W ++ +
Sbjct: 428 VDPLTGGGIHFAMEAAKIAAETLVEAFREGD--LTAGRLKVYQQRWRKAFGWDFWLSFLI 485
Query: 389 LDVLQKVFYRSNPARE-------AFVEMCADEYVQKMTFDSYLYKRVVP 430
L +L + + A E AFV A +V + + Y ++ P
Sbjct: 486 LRLLYRFPILLDAAAEVIKRKGDAFVGAWATAFV--LLWRQLRYGKLTP 532
>gi|240103362|ref|YP_002959671.1| geranylgeranyl hydrogenase [Thermococcus gammatolerans EJ3]
gi|259647506|sp|C5A6E5.1|GGR_THEGJ RecName: Full=Digeranylgeranylglycerophospholipid reductase;
Short=DGGGPL reductase; AltName:
Full=2,3-di-O-geranylgeranylglyceryl phosphate
reductase; AltName: Full=Geranylgeranyl reductase;
Short=GGR
gi|239910916|gb|ACS33807.1| Geranylgeranyl hydrogenase [Thermococcus gammatolerans EJ3]
Length = 395
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 154/343 (44%), Gaps = 38/343 (11%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLD--II 108
V V+G G AG A +A+ G LI++K + K C I + + ++D+P D I
Sbjct: 7 VVVVGAGIAGPIVARNVARAGFSVLLIDKKWAIGTPKQCAEGISIKVFEKYDIPYDKRFI 66
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMK 167
+R++ K+ SPS ++ ++ + G++ R+V D L A K GA V+
Sbjct: 67 NREIYGAKLYSPSGYELE----MRYKDVSGVILERKVFDKMLAYYAAKAGADVL-ARTEA 121
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLE-----VDAVIGADGANSRVAKSINAGDY 222
+D+ R DG G+ K E D ++ ADG S +A+ AG
Sbjct: 122 LDVIRK------------DGKVVGIKAKHEDEPIEIYADVIVAADGVESTIARK--AGIN 167
Query: 223 DYAIAFQERVKIPDEKMV--YYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVGTGTVTHK 279
YA + E ++ + +L ++ G++++P Y WVFPK D VG G +
Sbjct: 168 TYAPPHEFDSSYEYEMLIEGFDPDLIHLWFGNEIAPRGYVWVFPKDEDRANVGIGINSDN 227
Query: 280 GDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVTKCSG 338
K+ L + ++ I K++ + +P + L V +VGDAA V G
Sbjct: 228 PQTAKYYL-DKWLKENNIPAKKLLEINVGVVPVGGFVKELVKNNVLVVGDAARQVNPMHG 286
Query: 339 EGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKT 381
G+ A ++G + ++ I++ E + L+ Y ++W +T
Sbjct: 287 GGMAEAMEAGTIASKWIVKALEEENLSL----LQNYTKEWWET 325
>gi|217967253|ref|YP_002352759.1| geranylgeranyl reductase [Dictyoglomus turgidum DSM 6724]
gi|217336352|gb|ACK42145.1| geranylgeranyl reductase [Dictyoglomus turgidum DSM 6724]
Length = 396
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 130/312 (41%), Gaps = 30/312 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDIIDR 110
+ +IGGGP G A + ++T ++E +P C G + + EF LP + I
Sbjct: 5 LVIIGGGPVGSFAGYLAGNHNLKTLIVEEHNKIGEPLHCLGKLSVHAFEEFPLPHEPIRS 64
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+ P+ + + + P YI + R + D L + AEKNG + F+
Sbjct: 65 NLKGGYFFFPNGNFIKLKKA-NPDSYI--LDRSLFDIMLAKMAEKNGCT-----FLMSAK 116
Query: 171 PRNFEQPYVLYYTEYDGTKGGV---GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIA 227
E+ E + TK V G+++ +E +I A+GA + AK + Y ++
Sbjct: 117 AIGIEK-------ENNKTKLIVEEKGKRKEIETRVIINAEGAKRQFAKKLGLRINPYLVS 169
Query: 228 FQERV---KIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKK 284
Q V ++ D + V E+Y+G + S F+ W+ P D +G +
Sbjct: 170 LQYEVTGLELLDNECV------EVYLGLEYSKGFFLWISPYGDMAKIGVAVKPSENPKIY 223
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAGYVTKCSGEGIYF 343
K + L +I+R IP P L + ++GDAAGY +G GIYF
Sbjct: 224 LDKFINTLKKTRNLKPEILRTYGGIIPILGPYEEYLYPNIIIIGDAAGYNKSTTGGGIYF 283
Query: 344 AAKSGRMCAEAI 355
++ E +
Sbjct: 284 GLYGAQIAIEQV 295
>gi|150403306|ref|YP_001330600.1| geranylgeranyl reductase [Methanococcus maripaludis C7]
gi|209572864|sp|A6VJ23.1|GGR_METM7 RecName: Full=Digeranylgeranylglycerophospholipid reductase;
Short=DGGGPL reductase; AltName:
Full=2,3-di-O-geranylgeranylglyceryl phosphate
reductase; AltName: Full=Geranylgeranyl reductase;
Short=GGR
gi|150034336|gb|ABR66449.1| geranylgeranyl reductase [Methanococcus maripaludis C7]
Length = 390
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 164/365 (44%), Gaps = 39/365 (10%)
Query: 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPL 105
N + V V+G GPAG A+ +KNG +T LIE+ + P C A+P + EF +
Sbjct: 5 NDSYDVVVVGAGPAGSMASYNASKNGAKTLLIEKSQEIGTPVRCAEAVP--RIEEFGINP 62
Query: 106 D--IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-IN 162
D I + +I+P N + + K Y+ V R+V D YL R+ + G + +
Sbjct: 63 DPSFIKSYIKGGYLIAP-NGKKVVVKGGKTDGYV--VERKVFDKYLAIRSGQAGTQIAVK 119
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK--SINAG 220
++ + +V Y +G++ ++ VI ADG S +A+ + +
Sbjct: 120 SRVTGIEKTDDGYNVFVNY----------LGDEYVVKSKIVIAADGVESNIAEYAGLKSK 169
Query: 221 DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THK 279
I ++ + +++ E + E Y G D+ P Y W+FPK D V VG G + + K
Sbjct: 170 KNPKEICSCAEYEMTNVQLLDNE-MMEFYFG-DICPKGYIWLFPKGDTVNVGIGVIDSKK 227
Query: 280 GDIKKFQLATRNRAKDKILGGKI---IRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKC 336
I N + L + +V P+ P + + + +VGDAAG+V+
Sbjct: 228 RAIDYLDEFLSNPLVEGRLDNAVPVEFKVGGDPVG-GPIEKTVDDNIIVVGDAAGHVSPL 286
Query: 337 SGEGIYFAAKSGRMCAEAIIEG--SENGTRMIDEGDLRKYLEKWDKTYW-PTYKVL---D 390
+G GI + G M E + +EN + E L Y ++W + Y+ P K L +
Sbjct: 287 TGGGIGLSMDCGLMAGEVAAQSIKAENYS----EEFLSLYEKRWKEKYYKPLMKDLKYKN 342
Query: 391 VLQKV 395
+LQK+
Sbjct: 343 ILQKL 347
>gi|302867715|ref|YP_003836352.1| geranylgeranyl reductase [Micromonospora aurantiaca ATCC 27029]
gi|302570574|gb|ADL46776.1| geranylgeranyl reductase [Micromonospora aurantiaca ATCC 27029]
Length = 378
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 158/400 (39%), Gaps = 66/400 (16%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPLCMVGEFDLPLDI-IDR 110
+ V+GGGPAG +AA A+ GV T ++ER K CGG + + E +++
Sbjct: 3 LVVVGGGPAGLSAAHAAARAGVRTLVVERATHPRYKTCGGGLIGTSLAEVAGRVEVPAHD 62
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
++ ++ A P + M+RRE D LR A GA V G+ +
Sbjct: 63 RIGRVTFTRDGRRAF---TRRHPAPLVTMIRREEFDDRLRAAAVAAGAQVREGVAV---- 115
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
R EQ + D + + T+ VIGADG++ A+ + + +
Sbjct: 116 -RAIEQ-------DPDEVRLRLAGGETVRARTVIGADGSSGVTARHVGVRFRQVDLGLEL 167
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATR 290
+ + + + + G P Y WVFPK D + VG ++ +GD + + R
Sbjct: 168 ELPVDAAERDRWRGRVLLDWGP--LPGSYAWVFPKGDRLTVGV--ISARGDGDRTRAYLR 223
Query: 291 NRAKDKILGGKIIRVEAHPIPEHPR-----------PRRLSGRVALVGDAAGYVTKCSGE 339
+ L G PEH P R GRV + GDAAG + S E
Sbjct: 224 DFTDRLGLSGMT--------PEHDSGHLTRCRTGDSPLR-HGRVLVAGDAAGLLEPWSRE 274
Query: 340 GIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR- 398
GI +A +SGR+ EA+ GDL Y + D+ P + L +VF R
Sbjct: 275 GISYALRSGRLAGEAVA-----------AGDLDAYAREVDRRLTPEMRAGHRLLEVFERR 323
Query: 399 ---------SNPAREAFVEMCADEYVQKMTFDSYLYKRVV 429
S P FV C + +F L +R V
Sbjct: 324 PDVFHAMLASPPGWRMFVRFCQG----RASFAEVLDRRPV 359
>gi|73667722|ref|YP_303737.1| bacteriochlorophyll synthase [Methanosarcina barkeri str. Fusaro]
gi|72394884|gb|AAZ69157.1| 2,3-di-O-geranylgeranylglyceryl phosphate reductase [Methanosarcina
barkeri str. Fusaro]
Length = 396
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 157/364 (43%), Gaps = 70/364 (19%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIP-----LCMVGEFDLPL 105
V ++G GPAG +A AKNG L+++K + P C G +P ++ E LP
Sbjct: 9 VVIVGAGPAGSTSALYAAKNGASVLLLDKKREIGSPIQCAGFLPDASEVQALLHEARLPD 68
Query: 106 DI-------IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNG 157
+ + +++ ++++P+ +K G V R D +L E+A G
Sbjct: 69 TLKNYPDSCVLQRIDTQRIVTPNC-------NIKEFAVKGAVLDRRRYDQFLAEQATIAG 121
Query: 158 ASVINGLFMKMDLPRNFEQPYVLYYTEYDGT---KGGVGEKRTLEVDAVIGADGANSRVA 214
A L +K + T+ +GT GV K ++ A+IGADG NS VA
Sbjct: 122 AE----LMIKTRV------------TKIEGTTVETSGVFGKYKIKAKAIIGADGPNSLVA 165
Query: 215 K----SINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKC-DHV 269
K ++ + ++A + +++ D + EMY G D P Y W+FP+ D
Sbjct: 166 KLKGLALKPESRETSVALEYQIRNVD----IDPSSLEMYFGKDFVPGGYAWIFPEGQDRA 221
Query: 270 AVGTGT--------VTHKGDIKKFQLATRNR--AKDKILGGKIIRVEAHPIPEHPRPRRL 319
+G G V+ K + +F RN A K+ I+ V A IP + P R
Sbjct: 222 NIGIGIRSGVAENGVSAKEYLHRFM---RNHPLAGPKLKNCIIMNVIAGIIPVNGAPERT 278
Query: 320 SGRVAL-VGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKW 378
+ L VGDAAG++ +G GI A +G++ E E + R L +Y +W
Sbjct: 279 ATENTLIVGDAAGHIFATNGGGIPPAMIAGKVAGETAAEFAAGKCR------LEEYDRRW 332
Query: 379 DKTY 382
+
Sbjct: 333 RAQF 336
>gi|242281235|ref|YP_002993364.1| geranylgeranyl reductase [Desulfovibrio salexigens DSM 2638]
gi|242124129|gb|ACS81825.1| geranylgeranyl reductase [Desulfovibrio salexigens DSM 2638]
Length = 380
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 157/370 (42%), Gaps = 54/370 (14%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPL----CMVGEFDLPLDI 107
V + G GP G AA LA G + LI++ + K CGG + + F +D
Sbjct: 7 VIIAGAGPTGSTAATILAGKGFKVALIDKAEFPRKKLCGGLLTYKATEVLNKIFGCDVDC 66
Query: 108 IDRKVTKMKMISPS------NVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVI 161
+ +K + SP + + ++ P + V R D +L ++A GA +
Sbjct: 67 L-KKQGIINFESPEYSINYRDYNIRDAESSIPFRF---VDRIDFDYFLLQKAANAGAQIF 122
Query: 162 NGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGD 221
G +K Y + R + +IGADG +S + +S+
Sbjct: 123 TGEEIKE--------------CNYQDAEIKTASNRIFKGKYLIGADGVHSTIRRSVPYDK 168
Query: 222 YDYAIAFQERVKIPDEKMVYYENLA--EMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTH- 278
+ ++I +K + +A E+Y+G + Y WVFP V G G +T
Sbjct: 169 KKWRDDMAATIEIIFDKKDFPREVAKPELYIGHLRAG--YIWVFPAKGKVVTGIGALTRC 226
Query: 279 KGDIKK-FQLATRNRAKDKILGGKIIRVEAHPIP-----EHPRPRRLSGRVALVGDAAGY 332
D KK + R++ I + + ++ +P+P E+P GR L GDAAG
Sbjct: 227 TTDFKKTYMDFLRSQG---IANPESMHMQGYPLPYGNFMENP----CFGRTLLAGDAAGL 279
Query: 333 VTKCSGEGIYFAAKSGRMCAEAIIEG-SENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDV 391
V GEGI++A ++GR AE+I G +EN + + YLE+ +K +P + +
Sbjct: 280 VEPLFGEGIFYALQTGRYAAESIARGITEN------KSPDKFYLERLEKYVFPELRYSNR 333
Query: 392 LQKVFYRSNP 401
L+ + S P
Sbjct: 334 LRWTLFYSQP 343
>gi|170290972|ref|YP_001737788.1| geranylgeranyl reductase [Candidatus Korarchaeum cryptofilum OPF8]
gi|170175052|gb|ACB08105.1| geranylgeranyl reductase [Candidatus Korarchaeum cryptofilum OPF8]
Length = 380
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 154/356 (43%), Gaps = 42/356 (11%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD--NCKPCGGAIPLCMVGEFDL-PLDIID 109
V V+GGGPAG +AA+ A+ G++ L+E D KPCG + P +
Sbjct: 6 VIVVGGGPAGLSAAKFSAELGLKVILLEAYSDIRAWKPCGEGTSKTTFETAGIEPKPGVV 65
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
MK+ +PS V+I H Y + +++ L ++A GA + G ++
Sbjct: 66 SNELSMKVYAPSGKYVEI----PLHGY--AINKDLFLLELAKKAYLAGAEIRVGERVESV 119
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
L N G K GE TL V+GADG NS VAKS +
Sbjct: 120 LKEN---------GRVCGVKTAKGE--TLRGKVVVGADGYNSTVAKSSGLDNR------T 162
Query: 230 ERVKIPDEKMVYYE----NLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKGDIKK 284
E + KMV E N +YVG ++P Y W+FPK D VA VG G + K
Sbjct: 163 ELIPTYQYKMVGVELDSYNSGRIYVGS-MAPGGYAWIFPKDDQVANVGIGV---RPGSPK 218
Query: 285 FQLATRNRAKDKIL-GGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIY 342
L + + +I KII V + +P R G V L+GDAAG V +G GI+
Sbjct: 219 LYLDKFIKERPEIFRKAKIIGVGGYVVPIGGLAREYIGDGVILIGDAAGMVIPFTGAGIH 278
Query: 343 FAAKSGRMCAEAIIEGSENGTRMIDEGDLRKY---LEKWDKTYWPTYKVLDVLQKV 395
+ +G+ + I E E G +G L + E W K + + + V +++
Sbjct: 279 SSIAAGKAVSRTIAEALEKGD--TSKGALSSFEREYEGWIKRIRDSLRAMRVFERL 332
>gi|333986836|ref|YP_004519443.1| digeranylgeranylglycerophospholipid reductase [Methanobacterium sp.
SWAN-1]
gi|333824980|gb|AEG17642.1| Digeranylgeranylglycerophospholipid reductase [Methanobacterium sp.
SWAN-1]
Length = 395
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 180/402 (44%), Gaps = 57/402 (14%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V VIG GPAG +AA+ AKNG + +I++K + P A + G L ++ R V
Sbjct: 8 VLVIGAGPAGSSAAKHAAKNGADVVMIDKKSEIGSPKRCAEGVSKEGLKKLGIEPSSRWV 67
Query: 113 TK----MKMISPSNVAVDIG-QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK 167
T+ ++++SP+ V + + +K E ++ R++ D ++ A + GA + M
Sbjct: 68 TRELSGVRLVSPNGTDVWLNDERVKLPEAGYILERKIFDKHMAMDAARAGAKI-----MI 122
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK------SINAGD 221
L R + Y +GE ++ +IGADG SRV + + +
Sbjct: 123 KTLARGMRKDSNGYIVSCQ----RMGEDFEIKAKIIIGADGPESRVGRWGGLKTAAKPKN 178
Query: 222 YDYAIAFQ-ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHK 279
+ AI F+ +++ D + E Y G V+P Y W+FPK D +A VG G +T +
Sbjct: 179 MESAIQFEMAGLELEDPYSI------EFYFG-SVAPGGYAWIFPKGDDIANVGLGIITTE 231
Query: 280 GDIKKFQL---------ATRN-RAKDKILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGD 328
D ++ AT+N +A + +GG P ++L + + +VGD
Sbjct: 232 TDKSAYEHLVEFVENCPATKNAQAVELNVGGD---------PVGGMIKKLATDNLIIVGD 282
Query: 329 AAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTY-K 387
AAG+V +G GI A ++G E + G E L++Y +K ++ ++ K
Sbjct: 283 AAGHVNPLTGGGIITAMEAGLFAGEVAAAAVKEGD--YSEDRLKEYQKKCEEEIGKSFDK 340
Query: 388 VLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVV 429
L + + S+ ++ E Q + FDS K ++
Sbjct: 341 YLKTKEYLLSLSDGELDSIAEA-----FQGVEFDSINTKELI 377
>gi|443323546|ref|ZP_21052551.1| geranylgeranyl reductase family protein [Gloeocapsa sp. PCC 73106]
gi|442786726|gb|ELR96454.1| geranylgeranyl reductase family protein [Gloeocapsa sp. PCC 73106]
Length = 378
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 136/327 (41%), Gaps = 33/327 (10%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPLD-II 108
L ++G GP G A LAK G ++++ L KPCGG + + FD +I
Sbjct: 2 LDCIIVGAGPGGVTTAYHLAKKGHSVLVLDKASLPRSKPCGGGVSPAIAKWFDFDFTPVI 61
Query: 109 DRKVTKM----KMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-ING 163
D +T++ KM P + LK + + MV R D++L E+A K GA V N
Sbjct: 62 DNSITQVQYTWKMGDP------VQAPLKNVQPMWMVERSAFDSFLVEQAVKQGAIVKPNT 115
Query: 164 LFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYD 223
+ N Q T+ D T +IGADG N VA+ + GD+
Sbjct: 116 EVTSIQAQSNGWQ----VNTKTD----------TFAASYLIGADGVNGPVAQWLGLGDHQ 161
Query: 224 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDI 282
Y + +++P K Y N A G + + Y W FPK + G + +K +
Sbjct: 162 YTLG--ATLEVPTSKPPEYLNRAYFEFG--LLKNGYIWNFPKSKGYTISGGILRGNKANS 217
Query: 283 KKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVTKCSGEGI 341
+ + N A + L +P+ R L + R +VG+AA + + EGI
Sbjct: 218 AELKQQIYNYATEFGLDTSKSSYCEYPLALWRENRTLHTQRALIVGEAAAILDPLTAEGI 277
Query: 342 YFAAKSGRMCAEAIIEGSENGTRMIDE 368
+ +G A A+ + + T + +
Sbjct: 278 RPSIWTGIKAANAVSQSLQGDTNALAQ 304
>gi|18976469|ref|NP_577826.1| 43 kDa subunit bacteriochlorophyll synthase-like protein
[Pyrococcus furiosus DSM 3638]
gi|397652189|ref|YP_006492770.1| 43 kDa subunit bacteriochlorophyll synthase-like protein
[Pyrococcus furiosus COM1]
gi|74552271|sp|Q8U4J0.1|GGR_PYRFU RecName: Full=Digeranylgeranylglycerophospholipid reductase;
Short=DGGGPL reductase; AltName:
Full=2,3-di-O-geranylgeranylglyceryl phosphate
reductase; AltName: Full=Geranylgeranyl reductase;
Short=GGR
gi|18892010|gb|AAL80221.1| bacteriochlorophyll synthase, 43 kDa subunit homolog [Pyrococcus
furiosus DSM 3638]
gi|393189780|gb|AFN04478.1| 43 kDa subunit bacteriochlorophyll synthase-like protein
[Pyrococcus furiosus COM1]
Length = 393
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 168/376 (44%), Gaps = 43/376 (11%)
Query: 66 AETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLD--IIDRKVTKMKMISPS 121
A +AK G L+++K + K C I + + EFD+P D I+R++ ++ SPS
Sbjct: 18 ARDVAKAGFSVLLVDKKPAIGTPKQCAEGINVNVFKEFDIPYDKRFINREIYGARIYSPS 77
Query: 122 NVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVL 180
+ L+ + G++ R+V D L A K GA V + + V+
Sbjct: 78 GYTAE----LRYDKVSGVILERKVFDKMLAYYAAKAGADV-------------WARTEVI 120
Query: 181 YYTEYDGTKGGV-----GEKRTLEVDAVIGADGANSRVAK--SIN--AGDYDYAIAFQER 231
+G GV GE +E ++ ADG S VA+ IN A +++ A++
Sbjct: 121 DLLRKEGKIMGVKAKHEGELVEIEAKIIVAADGVESTVARLAGINTYAPPHEFDSAYEYE 180
Query: 232 VKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVGTGTVTHKGDIKKFQLATR 290
+ I Y +L ++ G++++P Y WVFPK D VG G + K+ L +
Sbjct: 181 MIIEG----YDPDLIHLWFGNEIAPRGYVWVFPKDEDRANVGIGINSDNEKTAKYYL-DK 235
Query: 291 NRAKDKILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
++ I KI+ + +P R L VA+VGDAA V G G+Y A K+
Sbjct: 236 WLKENNIPTKKILEINVGLVPVGGFVRELVKENVAVVGDAARQVNPVHGGGMYEAMKAAN 295
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR-SNPAREAFVE 408
+ A+ I++ E L+ Y ++W + P + L L++ + ++ + FV+
Sbjct: 296 ILAKWIVKALEEENLE----LLKNYTKEWWEVEGPKMERLLKLRRAMEKLTDEDIDVFVQ 351
Query: 409 MCADEYVQKMTFDSYL 424
+ ++K+ +Y
Sbjct: 352 LLGGTDLEKLAGGNYF 367
>gi|317154967|ref|YP_004123015.1| geranylgeranyl reductase [Desulfovibrio aespoeensis Aspo-2]
gi|316945218|gb|ADU64269.1| geranylgeranyl reductase [Desulfovibrio aespoeensis Aspo-2]
Length = 396
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 99/232 (42%), Gaps = 25/232 (10%)
Query: 139 MVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTL 198
+ R LDA L + A + GA V+ G + P P L T DGT L
Sbjct: 100 FIDRSRLDARLLDHAARAGAKVMLGARVTACDPGGGSTPARL--TLADGT--------VL 149
Query: 199 EVDAVIGADGANSRVAKSINAGDYDYAIAFQE---RVKIPDEKMVYYENLAEMYVGDDVS 255
E D +IGADGANS V S D D F V + + E+YVG
Sbjct: 150 EADHLIGADGANSVVRNSFLGHDRDRFNQFMAPAIEVTLDPAALPEPVECPELYVG--FI 207
Query: 256 PDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIP---- 311
YGWVFP D V VG + +G +K L KI + + HP+P
Sbjct: 208 EAGYGWVFPGQDRVLVGLCGL-RRGKVKFSNLFRDFLDFLKIDSRAVPPLRGHPLPYGNA 266
Query: 312 -EHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENG 362
E+P + G LVGDA G+V GEGI++A +G EA+ E+G
Sbjct: 267 LENP----VCGHAMLVGDAGGFVEPLFGEGIFYAMCTGLYAGEAVASALEDG 314
>gi|257076270|ref|ZP_05570631.1| geranylgeranyl hydrogenase [Ferroplasma acidarmanus fer1]
Length = 393
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 164/404 (40%), Gaps = 61/404 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDIIDR 110
V V G GP+G + L++NG + +E + KP C G + + + +
Sbjct: 17 VIVSGAGPSGSYLSYLLSRNGYKVLQLEEHREVGKPVECTGLVS-----------ERVFK 65
Query: 111 KVTKMKMISP---SNVAVDIGQTL---KPHEYIGMVRREVLDAYLRERAEKNGASV-ING 163
V M++ +NV G+++ K + I M R + D + A GA IN
Sbjct: 66 YVNSRSMVNEVHGANVFFPNGKSIHISKGEKTIVMYRDD-FDKDVSAMAIGAGADTRINA 124
Query: 164 LFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYD 223
+ + ++ + + Y E GE + + ++GADGANSR+ S+N Y+
Sbjct: 125 RVLDAKVNDSYGE---VKYREN-------GEIKYARANIIVGADGANSRIRLSLN---YE 171
Query: 224 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIK 283
++ + ++ +++G + S F+GW P + +G G V H IK
Sbjct: 172 RPKKIISTYQVDSSFHLDDQDDVNVFIGSENSKGFFGWAVPSGEITRIGVG-VDHVTAIK 230
Query: 284 KFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYF 343
F+ + +ILG + A PIP + + R L+GDAAG V SG GIY
Sbjct: 231 YFRNINVKFNRSQILG-----INAGPIPINYLSKTYGNRSLLLGDAAGIVKPLSGGGIYT 285
Query: 344 AAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAR 403
S + AI + E L+ Y + W + R
Sbjct: 286 GIISAKNAYTAIDQSFNRNN--FSEDALKAYQKLWKREI-------------------GR 324
Query: 404 EAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSL 447
E F++ +Y K++ + L ++ ED+ +N++G +
Sbjct: 325 ELFIDAKIQQYFSKISTNDTLLNKIYDTINREDIIRRINSLGDI 368
>gi|374636635|ref|ZP_09708195.1| geranylgeranyl reductase [Methanotorris formicicus Mc-S-70]
gi|373558413|gb|EHP84758.1| geranylgeranyl reductase [Methanotorris formicicus Mc-S-70]
Length = 391
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 143/341 (41%), Gaps = 28/341 (8%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDIIDR 110
V ++G GP G +A KNG +T LIE+ + +P C AIP +
Sbjct: 10 VVIVGAGPGGSMSAYASVKNGAKTLLIEKSQEIGEPVRCAEAIPSLEDFGIKPSSEFFKN 69
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
++ + +P+ + + Q K Y+ V R++ D +L RA K GA +
Sbjct: 70 EIKGGFLFAPNGKRITVTQG-KASGYV--VERKIFDKFLAIRAAKEGARLA--------- 117
Query: 171 PRNFEQPYVLYYTEYDGTK---GGVGEKRTLEVDAVIGADGANSRVAK--SINAGDYDYA 225
+ V E DG + E+ ++ VI ADG S VA+ + A
Sbjct: 118 ---VKSRVVGLEREGDGWNVIVKHLDEEYAVKTKVVIAADGVESNVAEYAGLKAKKKPLD 174
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKF 285
I ++ + +++ +++ E Y G++++ Y W+FPK D VG G K +
Sbjct: 175 ICSCAEYEMTNVELL-DKSMMEFYFGNNIAKGGYVWIFPKGDTANVGLGVRDSKKKAIDY 233
Query: 286 --QLATRNRAKDKILGGKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAGYVTKCSGEGIY 342
+ AKD++ I + P P + + +VGDAAG ++ +G GIY
Sbjct: 234 LNEFLENGLAKDRLKNATPIEFKVGGAPVGGPIEKTYDDGILVVGDAAGQISPLTGGGIY 293
Query: 343 FAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYW 383
A G + E + G E L +Y +KW + ++
Sbjct: 294 LAMDCGLIAGE--VAGRAIKNNNWSEDVLSEYEKKWKEKHY 332
>gi|158320309|ref|YP_001512816.1| putative oxidoreductase [Alkaliphilus oremlandii OhILAs]
gi|158140508|gb|ABW18820.1| conserved hypothetical protein [Alkaliphilus oremlandii OhILAs]
Length = 353
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 150/331 (45%), Gaps = 53/331 (16%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP-------CGGAIP---LCMVGEFD 102
V +IG GPAG A + K + +R ++N P CGG + M+ +
Sbjct: 4 VVIIGAGPAGSNLARLIGKKLKVLIIDKRDMENESPGNHLSKCCGGLLAPDAQKMIAKLG 63
Query: 103 L--PLDI-IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGAS 159
L P DI +D ++ ++ I +N + Q Y M R+ D +L
Sbjct: 64 LGMPKDILVDPQLFAVRTIDLTNNLERLYQRF----YWNM-DRDKFDKWLVSIIPPEVEK 118
Query: 160 VINGLFMK-MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN 218
N +F +++P +E Y+ GE +++ +IGADG S+V +N
Sbjct: 119 KFNAMFKSFIEIPEGYEVQYLCN-----------GESLSVKTKILIGADGGFSKVRNLMN 167
Query: 219 A-GDY-DYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV 276
G++ + IA QE + D K+ Y+ + D+ DFY W+ PK +++ +G+
Sbjct: 168 KEGNFPERYIAIQEWFECAD-KIPYFTA-----IFDEEITDFYSWIIPKENYLLLGSALR 221
Query: 277 THKGDIKKFQLATRNRAKDKILGGKI---IRVEAHPIPEHPRPRRLS------GRVALVG 327
+ +K++ ++K LG ++ E+ I RPR +S GR+A +G
Sbjct: 222 PKENTREKYECL---KSKLINLGFNFEHKVKTESAHIY---RPREVSQFYVGRGRIAFIG 275
Query: 328 DAAGYVTKCSGEGIYFAAKSGRMCAEAIIEG 358
+AAG ++ S EGI +A KS AE++ +G
Sbjct: 276 EAAGAISPSSAEGISYALKSSLYLAESLEKG 306
>gi|390960559|ref|YP_006424393.1| geranylgeranyl hydrogenase [Thermococcus sp. CL1]
gi|390518867|gb|AFL94599.1| geranylgeranyl hydrogenase [Thermococcus sp. CL1]
Length = 396
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 147/324 (45%), Gaps = 42/324 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLD--II 108
V V+G G AG A +AK+G LI++K + K C I + + ++D+P D I
Sbjct: 8 VVVVGAGIAGPIVARNVAKSGFSVLLIDKKPAIGTPKQCAEGISIKVFDKYDIPYDRRFI 67
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMK 167
+R++ K+ SPS ++ L+ E G++ R+V D L A K GA V+
Sbjct: 68 NREIYGAKLYSPSGYELE----LRYKEASGVILERKVFDKMLAYYAAKAGADVL------ 117
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLE-----VDAVIGADGANSRVAKS--INA- 219
+ L + +G G+ K E D V+ ADG S +A+ IN
Sbjct: 118 -------ARTEALDVIKKNGKVVGIKAKHEDEPVEIYADVVVAADGVESTIARKAGINTY 170
Query: 220 ---GDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVGTGT 275
++D + ++ ++ D M++ ++ G++++P Y WVFPK D VG G
Sbjct: 171 APPHEFDSSYEYEMLIEGFDPDMIH------LWFGNEIAPRGYVWVFPKDEDRANVGIGI 224
Query: 276 VTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVT 334
+ K+ L R ++ I K++ + +P + L V +VGDAA V
Sbjct: 225 NSDNPKTAKYYLDKWLR-ENNIPAKKLLEINVGVVPVGGFVKDLVKDNVLVVGDAARQVN 283
Query: 335 KCSGEGIYFAAKSGRMCAEAIIEG 358
G G+ A ++G + ++ I++
Sbjct: 284 PMHGGGMAEAMEAGTIASKWIVKA 307
>gi|268323155|emb|CBH36743.1| conserved hypothetical protein, geranylgeranyl reductase family
[uncultured archaeon]
Length = 393
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 155/356 (43%), Gaps = 66/356 (18%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCM-VGEFDLPLDIIDRK 111
V V+G GPAG A+T A++G++ LIER + P A + + +F +P D+K
Sbjct: 8 VVVVGAGPAGSLTAKTAAEHGLDVLLIERNQEIGVPVKCAEGVSKDIEKFVVP----DKK 63
Query: 112 -----VTKMKMISPSNVAVDI-GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
V + P V + G L+ Y+ + R + D +L A + GA
Sbjct: 64 WVSAVVKGANIYGPDGTKVVMAGNKLEEVGYV--LERRLFDKFLASEAARAGA------- 114
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKG----GVGEKRTLEVDAVIGADGANSRVAK------ 215
D+ E ++ Y KG +G+ + V+GADG S+V +
Sbjct: 115 ---DIRVKTEAYGIIKENGY--VKGVYTHSMGKDTRVFAHVVVGADGVESKVGRWAGIDT 169
Query: 216 -----SINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPK---CD 267
+I+ G +Y + E P+ EN +E Y+G +V+P Y WVFPK C
Sbjct: 170 RLPPHNISVG-AEYLMCNIE----PN------ENFSEFYLGSEVAPKGYVWVFPKGGDCA 218
Query: 268 HVAVGTGTVT----HKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIP-EHPRPRRLSGR 322
+V +G G T H+ I RN+ D GKI+ +P P+ ++
Sbjct: 219 NVGIGIGGDTSGENHRA-IDYLNAFVRNKFPD----GKIMAEMYGAVPLSGPQDENVADG 273
Query: 323 VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKW 378
+ LVGDAA V +G GI +A +G + A I E + + + L +Y E+W
Sbjct: 274 LILVGDAARQVNPLTGGGILYAMLAGEIAANVIAEAVQG--KDFSKLKLSEYDERW 327
>gi|269128615|ref|YP_003301985.1| geranylgeranyl reductase [Thermomonospora curvata DSM 43183]
gi|268313573|gb|ACY99947.1| geranylgeranyl reductase [Thermomonospora curvata DSM 43183]
Length = 418
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 149/345 (43%), Gaps = 38/345 (11%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVG--EFDLPLDIIDR 110
V+G GPAG + A LA+ G++ L+E+ K CG G P + + LD
Sbjct: 12 VVGAGPAGSSTAYWLAQAGLDVLLLEKATFPRDKICGDGLTPRAVRALISMGVDLDAPGW 71
Query: 111 KVTKMKMISPSNVAVDIGQ-TLKPHEYIGMVR-REVLDAYLRERAEKNGASVINGLFMKM 168
T+ I V +++ L G+VR R LD L E A K GA + G
Sbjct: 72 ARTRGLRIYGGGVKIELDWPELASFPDFGLVRARTDLDRLLAEHAAKAGARLQQGC---- 127
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGV-----GEKRTLEVDAVIGADGANSRVAKSINA---G 220
N P V E G GV G++ + V+ ADG +SR++ ++
Sbjct: 128 ----NVTGPIV---DERTGRIVGVTAKYQGQEVSYRAPLVVAADGNSSRLSLAMGLRRRT 180
Query: 221 DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTG----- 274
D +A + + P Y E+ E++ G + P YGWVFP + ++ VG G
Sbjct: 181 DRPMGVAVRRYYRTPRHDDEYLESWLELWDGQRLLPG-YGWVFPLGNGLSNVGLGLLNTS 239
Query: 275 ----TVTHKGDIKKFQLATRNRAK-DKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDA 329
V ++ ++K+ + D+ IR A P+ + +P G + LVGDA
Sbjct: 240 KAFQNVDYRAMLRKWTAGMPEEWQIDEDHATGPIRGAALPMGFNRQPHYTRG-LLLVGDA 298
Query: 330 AGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKY 374
G + +GEGI + +SG++ AE I++ T E L +Y
Sbjct: 299 GGMINPFNGEGIDYGLESGKLAAETIVQALARSTPGRRERTLHQY 343
>gi|325959758|ref|YP_004291224.1| digeranylgeranylglycerophospholipid reductase [Methanobacterium sp.
AL-21]
gi|325331190|gb|ADZ10252.1| Digeranylgeranylglycerophospholipid reductase [Methanobacterium sp.
AL-21]
Length = 395
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 183/419 (43%), Gaps = 65/419 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V VIG GPAG + A+ A+NG + L+++K + P A + G L ++ R V
Sbjct: 8 VLVIGAGPAGSSTAKYAAQNGAKVILMDKKSEIGAPKRCAEGVSKEGLKKLGIEPSSRWV 67
Query: 113 TK----MKMISPSNVAVDIG-QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK 167
TK ++++SP+ V + +K E ++ R+V D ++ A + GA++ M
Sbjct: 68 TKELSGVRLVSPNGTDVWLNDDQVKLPEAGYILERKVFDKFMAMDAARAGATI-----MI 122
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK------SINAGD 221
L R + Y + +GE ++ V+GADG SRV + + +
Sbjct: 123 KTLARGMRKDSNGYIVSCE----NMGEDFEIKAKIVVGADGPESRVGRWGGLKTVVKPKN 178
Query: 222 YDYAIAFQ-ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHK 279
+ I F+ V++ D + E Y G V+P Y W+FPK +A VG G V
Sbjct: 179 MESGIQFEMAGVEMEDPDCI------EFYFG-SVAPGGYAWIFPKGGDIANVGLGIVNTV 231
Query: 280 GDIKKFQL---------ATRN-RAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDA 329
D +Q AT+N +A + +GG + + E V +VGDA
Sbjct: 232 TDKSAYQHLLEFVENCPATQNAQAVELNIGGDPVGGMLKDLVED--------NVMIVGDA 283
Query: 330 AGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDL-RKYLEKWDKTYWPTYKV 388
AG+V +G GI A ++G+ E E I EGD +K L++++K ++
Sbjct: 284 AGHVNPLTGGGIITALEAGKYAGEVAAEA-------IKEGDCSKKRLKEYEKIC--KEEI 334
Query: 389 LDVLQKVFYR-------SNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLA 440
D K F S+ ++ E D +K++ S L K ++ +P LKL
Sbjct: 335 GDSFNKYFKTKEYMLSLSDEELDSIAEAFQDYEFEKIS-TSELVKLLIKVSPKALLKLG 392
>gi|357388629|ref|YP_004903468.1| putative geranylgeranyl reductase [Kitasatospora setae KM-6054]
gi|311895104|dbj|BAJ27512.1| putative geranylgeranyl reductase [Kitasatospora setae KM-6054]
Length = 434
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 126/293 (43%), Gaps = 49/293 (16%)
Query: 87 KPCGGAI--PL--CMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHE---YIGM 139
K CGG I P + +F LPL DR IS A+D T G+
Sbjct: 86 KTCGGGIIGPSRDALPEDFKLPLQ--DR-------ISAVTFALDGKWTRTRRSKRMLFGV 136
Query: 140 VRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLE 199
V R+ D L + AE+ GA ++ G+ EQ T + GG R +E
Sbjct: 137 VNRDEFDLRLVQAAEQAGAVLVTGVTAT-----GVEQQGGDSRTVFVTLAGG----RRVE 187
Query: 200 VDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFY 259
AV+GADG+ SR+ + + + + + +P+ Y+ + G P Y
Sbjct: 188 ARAVVGADGSASRIGRHVGVSFDQIDLGLEAEIPVPESVSRYWAGRIHLDWGP--LPGSY 245
Query: 260 GWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKI--LG----------GKIIRVEA 307
GWVFPK D + G ++ +G+ ++ T+ D I LG G + R A
Sbjct: 246 GWVFPKTDSGTLTVGVISARGEGER----TKEYLADYIRRLGLSGFEPLVESGHLTRCRA 301
Query: 308 HPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
+ P R GRV + GDAAG + + EGI +A +SGR+ E ++ +E
Sbjct: 302 E---DSPLSR---GRVLVAGDAAGLLEPWTREGISYALRSGRLAGEWAVQVAE 348
>gi|15605692|ref|NP_213068.1| hypothetical protein aq_104 [Aquifex aeolicus VF5]
gi|2982849|gb|AAC06471.1| hypothetical protein aq_104 [Aquifex aeolicus VF5]
Length = 370
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 141/315 (44%), Gaps = 33/315 (10%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFD--LPLDIID 109
V V+G GP+G +AA L++ G+ L+ERK L K CGGA+ G F LP D
Sbjct: 6 VVVVGAGPSGSSAARYLSEKGLRVLLMERKKLPRFKLCGGALS----GRFSKYLPQDF-- 59
Query: 110 RKVTKMKMISPSNVAV--DIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK 167
K + +I + D + + E ++ R D +L ++A + G + +
Sbjct: 60 -KSKVLNVIHKGYLGFRGDKHKLKEREEVAYIIDRADFDHFLAQKAMEKGCELREETEL- 117
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIA 227
+DL E+ ++ D TKG V D +IGADG +S+VAK + Y
Sbjct: 118 LDLWE--EKGKIIL----DTTKGKV------SCDFLIGADGFHSKVAKFLGFKKEKY--- 162
Query: 228 FQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQL 287
++ + + +M + + E+ + Y WVFPK + + +G + + ++ +
Sbjct: 163 YRSVEVLAEGEMDFNSVVIEL----GLVKRGYLWVFPKGNKLNIGVASTEKENLLEVLKD 218
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSGEGIYFAAK 346
+ + K+ + P E GR+ LVGDA +V GEGIY+
Sbjct: 219 YIKRQKIVKVKKIYKPKSWFIPFAEGSEELHTGRGRILLVGDAGNFVDPLLGEGIYYGYL 278
Query: 347 SGRMCAEAIIEGSEN 361
SG + +AI+E +N
Sbjct: 279 SGLLAGDAILENPQN 293
>gi|11498075|ref|NP_069300.1| bacteriochlorophyll synthase [Archaeoglobus fulgidus DSM 4304]
gi|2650164|gb|AAB90773.1| bacteriochlorophyll synthase, 43 kDa subunit (chlP-1)
[Archaeoglobus fulgidus DSM 4304]
Length = 410
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 148/341 (43%), Gaps = 29/341 (8%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGE-FDLPLDIID 109
V V+G GPAG AA+T A+ G++ L+E++ + P C I + + F++ I
Sbjct: 27 VVVVGAGPAGSMAAKTAAEQGLKVLLVEKRQEIGTPVRCAEGISRESIEKFFEVDKKWIA 86
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
+VT K+ +P+ + + + + +E ++ R++ D ++ A K GA V M +D
Sbjct: 87 AEVTGAKIYAPNKTEIVMSEEMAGNEVGYVLERKIFDRHVARLAAKAGAEVYVKTAM-VD 145
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVA------KSINAGDYD 223
R + V +GE +E +IGADG S++ K++ + +
Sbjct: 146 FERKDGKVKVKLRR--------LGEDWEVETKILIGADGVESKIGRKAGIIKTLKLNEVE 197
Query: 224 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKGDI 282
+ DE Y+ Y+G +++P Y W+FPK + A VG G + +
Sbjct: 198 SCAQYLMTGLDIDESYTYF------YLGRELAPGGYAWIFPKGNGSANVGIGVLPKMAER 251
Query: 283 KKFQLATRNRAKDKILGGKIIRVEAHPIPEHPR-PRRLSGRVALVGDAAGYVTKCSGEGI 341
+ K+ I GKI+ A +P + ++ + L GDAA + +G GI
Sbjct: 252 TAKEYLDAFIEKEGI-EGKIVEFVAGAVPVYGEIETAVADNIMLAGDAAYHADPITGGGI 310
Query: 342 YFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTY 382
A +G + E + D LR+Y E W +
Sbjct: 311 ANALSAGYYAGKVAAEAVQKNDFSADF--LRRYDELWKNDF 349
>gi|206557944|sp|O29786.2|GGR_ARCFU RecName: Full=Digeranylgeranylglycerophospholipid reductase;
Short=DGGGPL reductase; AltName:
Full=2,3-di-O-geranylgeranylglyceryl phosphate
reductase; AltName: Full=Geranylgeranyl reductase;
Short=GGR
Length = 387
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 148/341 (43%), Gaps = 29/341 (8%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGE-FDLPLDIID 109
V V+G GPAG AA+T A+ G++ L+E++ + P C I + + F++ I
Sbjct: 4 VVVVGAGPAGSMAAKTAAEQGLKVLLVEKRQEIGTPVRCAEGISRESIEKFFEVDKKWIA 63
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
+VT K+ +P+ + + + + +E ++ R++ D ++ A K GA V M +D
Sbjct: 64 AEVTGAKIYAPNKTEIVMSEEMAGNEVGYVLERKIFDRHVARLAAKAGAEVYVKTAM-VD 122
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVA------KSINAGDYD 223
R + V +GE +E +IGADG S++ K++ + +
Sbjct: 123 FERKDGKVKVKLRR--------LGEDWEVETKILIGADGVESKIGRKAGIIKTLKLNEVE 174
Query: 224 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKGDI 282
+ DE Y+ Y+G +++P Y W+FPK + A VG G + +
Sbjct: 175 SCAQYLMTGLDIDESYTYF------YLGRELAPGGYAWIFPKGNGSANVGIGVLPKMAER 228
Query: 283 KKFQLATRNRAKDKILGGKIIRVEAHPIPEHPR-PRRLSGRVALVGDAAGYVTKCSGEGI 341
+ K+ I GKI+ A +P + ++ + L GDAA + +G GI
Sbjct: 229 TAKEYLDAFIEKEGI-EGKIVEFVAGAVPVYGEIETAVADNIMLAGDAAYHADPITGGGI 287
Query: 342 YFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTY 382
A +G + E + D LR+Y E W +
Sbjct: 288 ANALSAGYYAGKVAAEAVQKNDFSAD--FLRRYDELWKNDF 326
>gi|170289833|ref|YP_001736649.1| monooxygenase FAD-binding [Candidatus Korarchaeum cryptofilum OPF8]
gi|170173913|gb|ACB06966.1| monooxygenase FAD-binding [Candidatus Korarchaeum cryptofilum OPF8]
Length = 371
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 135/334 (40%), Gaps = 62/334 (18%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEF-DLPLDIID 109
V V+GGG AG A L+ G + ++ER+ P C G + + E D +
Sbjct: 5 VLVVGGGIAGSTLASILSSRGFDVTIVERRPRVGYPHHCSGILGFDAIRELVTFSEDWVL 64
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
++ ISP + + I + L +V R ++D E A +GA
Sbjct: 65 SEINHATFISPGGLKIGIDKPLAK-----VVDRSMMDLETWEHALSSGARG--------- 110
Query: 170 LPRNFEQPYVLYYTEYDGTKG---GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAI 226
+ T + G K + + T+ D ++GADG+ S VA++ + +
Sbjct: 111 ----------MLSTPFKGLKSRNEAIVKGDTISFDLIVGADGSLSSVARAFGLRRLETEL 160
Query: 227 AFQERV--KIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKK 284
Q R +I DE V + G + S W+ P D V VG + G+I +
Sbjct: 161 GLQRRCEGRIGDEYAV------RILRGSNFS-----WIQPWGDCVKVGA--IGEFGEIME 207
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
+ ++ I ++E + IP PR R G ALVGDAAG V S G+ FA
Sbjct: 208 VIGSCKS---------PIGKIEGNLIPRRPRKRFYGGNFALVGDAAGQVKPLSRGGVLFA 258
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKW 378
++ ++ AE G +G L Y +W
Sbjct: 259 VRAAKILAEEFERGGLSG--------LSSYGRRW 284
>gi|440781281|ref|ZP_20959623.1| oxidoreductase [Clostridium pasteurianum DSM 525]
gi|440220886|gb|ELP60092.1| oxidoreductase [Clostridium pasteurianum DSM 525]
Length = 357
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 145/324 (44%), Gaps = 44/324 (13%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC-------KPCGGAIP---LCMVGEFD 102
+ ++G GPAG A L K + +R+L + K CGG + M+ +F
Sbjct: 4 IVIVGAGPAGATLARLLGKKLKILIMDKRQLLDMNSKSNFEKCCGGLLAPDAQQMLAKFG 63
Query: 103 L--PLDI-IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGAS 159
L P DI + ++ ++ I N +I Q + H YI V RE D +L
Sbjct: 64 LGIPKDILVGPQLFTVRTIDIQN---NIEQYYQRH-YIN-VHREKFDKWLVSMVPPEVTV 118
Query: 160 VINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK--SI 217
V +F + ++ N V Y+ + G++RT+ ++GADGA S V + S+
Sbjct: 119 VCEAVFKRFEIA-NDNNIKVQYFEQ--------GKERTIYTKVLVGADGAFSTVRRKISL 169
Query: 218 NAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT 277
++ + I+ QE K+ + + Y+ ++ + DD++ DFY W PK D + +GT +
Sbjct: 170 DSRNPKTYISIQEYYKM-NSNLPYFSSIFD----DDIT-DFYSWTIPKDDLLVLGTAVMP 223
Query: 278 HKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL------SGRVALVGDAAG 331
+KF + G ++ + RP +L + L+G+AAG
Sbjct: 224 KNKPYEKFMALKKKLILRGFEFGPCVKKNGAYLL---RPEKLDQICLGKANIPLIGEAAG 280
Query: 332 YVTKCSGEGIYFAAKSGRMCAEAI 355
+++ S EG+ ++ KS A AI
Sbjct: 281 WISPSSAEGLSYSFKSAYALANAI 304
>gi|410670145|ref|YP_006922516.1| geranylgeranyl reductase [Methanolobus psychrophilus R15]
gi|409169273|gb|AFV23148.1| geranylgeranyl reductase [Methanolobus psychrophilus R15]
Length = 392
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 140/320 (43%), Gaps = 48/320 (15%)
Query: 70 AKNGVETFLIERK-LDNCKPCGGAIPLCMVG--EFDLPLDIIDRKVTKMKMISPSNVAVD 126
K G++T LIE++ KPCGGA+ + +F++P +II+++V ++ V
Sbjct: 21 GKMGLKTLLIEKESFPRYKPCGGALSEHAMSFLDFEVPEEIIEKEVFGARICFRDQVI-- 78
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
+ K H +V R LD + E+A + I G K + E +V T+
Sbjct: 79 --ERSKDHRLSAIVTRSKLDNFFLEKARETWIEDITG---KKVIEVLDENDHVTVKTK-- 131
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLA 246
+ T +I A G+ + + D ++P+
Sbjct: 132 --------ESTYVSRFLILATGSQGMLKHQVRRKDNKKEYGICMVAEVPENN-----GTI 178
Query: 247 EMYVGDDVSPDF------YGWVFPKCDHVAVGTGTVTH-----KGDIKKFQLATRNRAKD 295
+ Y+ D V F YGW+FP + +VGTG + + + I+++ L N +
Sbjct: 179 DSYIKDAVELRFGVAGMGYGWIFPHDGYYSVGTGGLANLLPDPRSTIQQY-LQENNFNGN 237
Query: 296 KILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEA 354
L G H IP R L GR+ LVGDAAG+V +GEG+ +A +SG++ AE
Sbjct: 238 YKLNG-------HVIPCGGYKRTLVRGRIMLVGDAAGFVDAFTGEGLAYAIRSGQIAAEV 290
Query: 355 IIEGSENGTRMIDEGDLRKY 374
+ E ++ + G L+KY
Sbjct: 291 VAEALDSS---LHPGHLKKY 307
>gi|254391133|ref|ZP_05006340.1| electron transfer oxidoreductase [Streptomyces clavuligerus ATCC
27064]
gi|294814391|ref|ZP_06773034.1| Electron transfer oxidoreductase [Streptomyces clavuligerus ATCC
27064]
gi|326442781|ref|ZP_08217515.1| oxidoreductase [Streptomyces clavuligerus ATCC 27064]
gi|197704827|gb|EDY50639.1| electron transfer oxidoreductase [Streptomyces clavuligerus ATCC
27064]
gi|294326990|gb|EFG08633.1| Electron transfer oxidoreductase [Streptomyces clavuligerus ATCC
27064]
Length = 428
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 172/416 (41%), Gaps = 58/416 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCG-GAIPLCMVGEFDL 103
L+ + V V+G GPAG AA LAK G++ L+E+ K CG G P +
Sbjct: 5 LSEHSADVIVVGAGPAGSTAAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVSM 64
Query: 104 PLDIIDR----KVTKMKMISPS-NVAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNG 157
+DI + + +++I + +D + +Y G+VR R+ D L +A+K G
Sbjct: 65 GIDISEEAGWLRNKGLRIIGGGMRLQLDWPELAAYPDY-GLVRKRDDFDEQLARQAQKAG 123
Query: 158 ASVINGLFMKMDLPRNFEQPYVLYYT-EYDGTKGGVGEKRT---LEVDAVIGADGANSRV 213
A + N P + T G + +GE+RT V+ ADG +SR+
Sbjct: 124 ARLYERC--------NVGAPVIDARTGRITGVEAKLGEERTPVTFHAPLVVAADGNSSRI 175
Query: 214 AKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPD----FYGWVFPKC 266
+ ++ D +A + P Y E+ E++ PD YGW+F
Sbjct: 176 SLAMGLHRREDRPMGVAVRTYFTSPRHDDDYLESWLELWDRRGPGPDRLLPGYGWIFGMG 235
Query: 267 DHVA-VGTGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIRVEAHPIPEH 313
D + VG G + K+ +A ++ + G IR A P+ +
Sbjct: 236 DGTSNVGLGVLNTSSSFKELDWREVLKAWCASMPEEWGYTEENMTG--PIRGAALPMAFN 293
Query: 314 PRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRK 373
+P G + L+GDA G V +GEGI +A +S ++ AE I++ T E L++
Sbjct: 294 RQPHYTRG-LLLIGDAGGLVNPFNGEGIAYAMESAQIAAEVIVQAHARATPAQRELALQR 352
Query: 374 YLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVV 429
Y + TY Y + AFV++ + + K+ D L V+
Sbjct: 353 YPKILKDTYGGYYTL--------------GRAFVKLIGNPKIMKLAADRGLSHPVL 394
>gi|435850749|ref|YP_007312335.1| geranylgeranyl reductase family protein [Methanomethylovorans
hollandica DSM 15978]
gi|433661379|gb|AGB48805.1| geranylgeranyl reductase family protein [Methanomethylovorans
hollandica DSM 15978]
Length = 396
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 146/335 (43%), Gaps = 45/335 (13%)
Query: 65 AAETLAKNGVETFLIERK-LDNCKPCGGAIP---LCMVGEFDLPLDIIDRKVTKMKMISP 120
AA T A+ G+ L+E++ + K CGGA+ L ++G P+D + +
Sbjct: 17 AARTCAEKGLRVLLLEKEEVPRYKACGGAVSWKALKLIG----PIDDVKPQYMCYGATIH 72
Query: 121 SNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVL 180
S Q +K I +V R+ D +L ++A+ +GA VIN + + E+ +V+
Sbjct: 73 SPAMRQSSQKIKEAASI-LVFRDSFDHFLLKQAQNSGA-VINTGEKVISVNITDERVHVV 130
Query: 181 YYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGD----YDYAIAFQERVKIPD 236
TKG K +IGADG NS VA+ Y I + + +
Sbjct: 131 ------TTKGEHAAK------ILIGADGVNSTVARETGLRKKWEPQGYGICIETEIALSS 178
Query: 237 E---KMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQ-----LA 288
E + + + L E Y + YGWVFPK + ++VG G + ++K Q ++
Sbjct: 179 EDAERCILDKELIEAYF---LKSRGYGWVFPKGNIMSVGIG-LWKPSNMKPAQAFDEFIS 234
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSG-RVALVGDAAGYVTKCSGEGIYFAAKS 347
++ K L I H +P R G +V LVGDAAG+V GEGIY+A S
Sbjct: 235 FLSKEKGVDLAAHIDHRFIHRVPVGGMNRNTYGEKVLLVGDAAGFVDPFLGEGIYYAVAS 294
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTY 382
G E E GT DL Y ++ D +
Sbjct: 295 GVTAGEVAAEAIYTGT------DLSSYRKRCDSLF 323
>gi|242398971|ref|YP_002994395.1| Geranylgeranyl hydrogenase [Thermococcus sibiricus MM 739]
gi|242265364|gb|ACS90046.1| Geranylgeranyl hydrogenase [Thermococcus sibiricus MM 739]
Length = 397
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 168/382 (43%), Gaps = 31/382 (8%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLD--II 108
V V+G G AG A +AK G LI++K + K C I + + + ++P D I
Sbjct: 9 VVVVGAGIAGPIVARNVAKEGHSVLLIDKKPAIGAPKQCAEGINIGVFEKHNIPYDKRFI 68
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMK 167
+R++ ++ SPS ++ ++ G++ R+V D L A + GA V
Sbjct: 69 NREIYGARLYSPSGYTLE----MRYSRVSGVILERKVFDKMLAFYAARAGADV------- 117
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAI 226
LPR + + G K GE + D ++ ADG S +A+ AG YA
Sbjct: 118 --LPRTEATDVIREDGKIIGIKAKKEGEPIEIRADILVAADGVESTIARK--AGINTYAP 173
Query: 227 AFQERVKIPDEKMV--YYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVGTGTVTHKGDIK 283
+ E ++ + +L ++ G++V+P Y WVFPK D VG G +
Sbjct: 174 PHEFDSAYEYEMLIEGFDPDLIHLWFGNNVAPRGYVWVFPKDEDRANVGVGINSDNPMTA 233
Query: 284 KFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVTKCSGEGIY 342
K+ L + ++ I KI+ V IP + L V +VGDAA V G G+
Sbjct: 234 KYYL-DKWLKENNIPFKKILEVNVGVIPVGGFLKELVKNNVLVVGDAARQVNPMHGGGMA 292
Query: 343 FAAKSGRMCAEAIIEGSENGTRMIDEGDLRKY-LEKWDKTYWPTYKVLDVLQKVFYRSNP 401
A ++G + ++ I+E + + L+ Y E W+K +VL V + V + ++
Sbjct: 293 EAMEAGAIASKWIVEALKEENFEL----LKNYTTEWWEKDGKRLERVLRVRKVVEHLTDE 348
Query: 402 AREAFVEMCADEYVQKMTFDSY 423
+ F++ + +K+ Y
Sbjct: 349 DLDVFIQTLSGIDAEKIAGGRY 370
>gi|315505884|ref|YP_004084771.1| geranylgeranyl reductase [Micromonospora sp. L5]
gi|315412503|gb|ADU10620.1| geranylgeranyl reductase [Micromonospora sp. L5]
Length = 378
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 162/400 (40%), Gaps = 66/400 (16%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPLCMVGEFDLPLDI-IDR 110
+ V+GGGPAG +AA A+ GV T ++ER K CGG + + E +++
Sbjct: 3 LVVVGGGPAGLSAAHAAARAGVRTLVVERATHPRYKTCGGGLIGTSLAEVAGRVEVPAHD 62
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
++ ++ A P + M+RRE D LR A GA V G+ +
Sbjct: 63 RIGRVTFTRDGRRAF---TRRHPAPLVIMIRREEFDDRLRAAAVAAGAQVREGVAV---- 115
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
R EQ + D + + T+ VIGADG++ A+ + + +
Sbjct: 116 -RAIEQ-------DPDEVRLRLAGGETVRARTVIGADGSSGVTARHVGVRFRQVDLGLEL 167
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATR 290
+ + + + + G P Y WVFPK D + VG ++ +GD + + R
Sbjct: 168 ELPVDAAERDRWRGRVLLDWGP--LPGSYAWVFPKGDRLTVGV--ISARGDGDRTRAYLR 223
Query: 291 NRAKDKILGGKIIRVEAHPIPEHPR-----------PRRLSGRVALVGDAAGYVTKCSGE 339
+ D+ LG +R PEH P R GRV + GDAAG + S E
Sbjct: 224 D-FTDR-LGLSGVR------PEHDSGHLTRCRTGDSPLR-HGRVLVAGDAAGLLEPWSRE 274
Query: 340 GIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR- 398
GI +A +SGR+ EA+ GDL Y + D+ P + L +VF R
Sbjct: 275 GISYALRSGRLAGEAVA-----------AGDLDAYAREVDRRLTPEMRAGHRLLEVFERR 323
Query: 399 ---------SNPAREAFVEMCADEYVQKMTFDSYLYKRVV 429
S P FV C + +F L +R V
Sbjct: 324 PDVFHAMLASPPGWRMFVRFCQG----RASFAEVLDRRPV 359
>gi|383320069|ref|YP_005380910.1| geranylgeranyl reductase family [Methanocella conradii HZ254]
gi|379321439|gb|AFD00392.1| geranylgeranyl reductase family [Methanocella conradii HZ254]
Length = 394
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 155/354 (43%), Gaps = 71/354 (20%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPL-DIID 109
V V+G GP+G AA+ AKNG T LIE + + C G I + + E +LP + I+
Sbjct: 5 VVVVGAGPSGSMAAKYAAKNGARTLLIEEHGMIGSPVSCTGHISVKALNECELPEGNFIN 64
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
+++ + +P+N ++ I + Y+ V R++ D L + A GA
Sbjct: 65 KRIRGAFVYAPNNHSIPI-DGRRTMTYV--VERKIFDRELAKAAASAGAE---------- 111
Query: 170 LPRNFEQPYVLYYTEYDGTK---GGV-------GEKRTLEVDAVIGADGANSRVAKSINA 219
VL T G + GGV G+K + VIGADG S+VA+S
Sbjct: 112 ---------VLVDTAVRGVRKVPGGVVLDAVSEGKKTEIAAKVVIGADGVRSKVARSAGL 162
Query: 220 GDYDY---AIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPK---CDHVAVGT 273
G + I + + D + V E+++G +P ++ W P C + +
Sbjct: 163 GRIPHVCTGIQVEASYEPRDPEFV------EVFLGHRYAPGYFAWSVPTTGGCCRIGLNA 216
Query: 274 GTVTH---KGDIKKFQLATRN--RAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGD 328
H + +K+ ++ ++ A D I+GG IP R +S V +VGD
Sbjct: 217 DNDAHVYLERLLKEHEIVSKKARSAVDLIMGG---------IPVGTLKRTVSDGVLIVGD 267
Query: 329 AAGYVTKCSGEGIYFAAK----SGRMCAEAIIEGSENGTRMIDEGDLRKYLEKW 378
AAG V S GIY AK +G + A+A +EG + R+++ Y +W
Sbjct: 268 AAGQVKPISYGGIYTGAKCAKIAGEVAAKAALEGDVSAQRLME------YERRW 315
>gi|295837129|ref|ZP_06824062.1| monooxygenase, FAD-binding [Streptomyces sp. SPB74]
gi|197697239|gb|EDY44172.1| monooxygenase, FAD-binding [Streptomyces sp. SPB74]
Length = 427
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 183/448 (40%), Gaps = 63/448 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCG-GAIPLCMVGEFDL 103
L+ + V V+G GPAG A A LAK G++ L+E+ K CG G P +
Sbjct: 5 LSEHSADVIVVGAGPAGSATAYHLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLIAM 64
Query: 104 PLDIIDR----KVTKMKMISPSN-VAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNG 157
+DI + + +++I+ N + +D + +Y G+VR R+ D L A+K G
Sbjct: 65 GIDISEEAGWLRNKGLRIIAGGNRLQLDWPELASFPDY-GLVRKRDDFDEQLARAAQKAG 123
Query: 158 ASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKR---TLEVDAVIGADGANSRVA 214
A + N P G +GE++ T V+ ADG ++R++
Sbjct: 124 ARLYERC--------NVGAPVTDESGRITGVHAKLGEEKTPVTFHAPLVVAADGNSTRLS 175
Query: 215 KSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDFYGWVFPKCD 267
++ D +A + P Y E+ E++ G+D YGW+F D
Sbjct: 176 LAMGLHRREDRPMGVAVRTYFTSPRHDDDYLESWLELWDRRGPGEDRLLPGYGWIFGMGD 235
Query: 268 HVA-VGTGTVTHKGDIKKFQLATRNRAKDKILGGKI----------IRVEAHPIPEHPRP 316
+ VG G + K+ +A + IR A P+ + +P
Sbjct: 236 GTSNVGLGVLNTSSSFKELDWREVLKAWCASMPEDWGYTPENMTIPIRGAALPMAFNRQP 295
Query: 317 RRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLE 376
G + LVGDA G V +GEGI +A +SG + AE I++ T + E L++Y +
Sbjct: 296 HYTKG-LLLVGDAGGLVNPFNGEGIAYAMESGAIAAEVIVQAHGRRTAQLRELTLQRYPK 354
Query: 377 KWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLED 436
TY Y + AFV++ + + K+ + L V+
Sbjct: 355 VLKDTYGGYYSL--------------GRAFVKLIGNPKIMKLATERGLTHPVL------- 393
Query: 437 LKLAVNTIGSL---VRANALRREMDKLT 461
+K + + +L +A+ R ++ LT
Sbjct: 394 MKFTLKLLANLTDPTHGDAMDRVINGLT 421
>gi|88602413|ref|YP_502591.1| geranylgeranyl reductase [Methanospirillum hungatei JF-1]
gi|121697778|sp|Q2FUA4.1|GGR_METHJ RecName: Full=Digeranylgeranylglycerophospholipid reductase;
Short=DGGGPL reductase; AltName:
Full=2,3-di-O-geranylgeranylglyceryl phosphate
reductase; AltName: Full=Geranylgeranyl reductase;
Short=GGR
gi|88187875|gb|ABD40872.1| 2,3-di-O-geranylgeranylglyceryl phosphate reductase
[Methanospirillum hungatei JF-1]
Length = 402
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 168/409 (41%), Gaps = 53/409 (12%)
Query: 65 AAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLD-IIDRKVTKMKMISPS 121
AA+T A+ G L E++ P C + ++ EF P D + ++ K +I+P
Sbjct: 19 AAKTFAEKGYSVLLTEKRPAIGAPVRCAEGVGKALMHEFFKPEDRWVAAEIEKANIIAPD 78
Query: 122 NVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLY 181
+++ E ++ R+V D L A GA + + V
Sbjct: 79 GFKMELEPEKAGAEVGYVLHRKVFDRDLVWMAAGAGADI------------QVKTRAVTP 126
Query: 182 YTEYDGTKGGV----GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
E KG + G + + I ADG S+ A+ D + +E
Sbjct: 127 IMEDGAVKGAILNQGGIAQEVRAGLTIAADGVESKFARWCGV---DTTVPLREMETCAQY 183
Query: 238 KMVYYE---NLAEMYVGDDVSPDFYGWVFPKCD---HVAVGTGTVTHKGDIKKFQLATRN 291
M + + E YVG++++P Y W+FPK D +V +G G K + R
Sbjct: 184 LMTGIDIDAHATEFYVGNNIAPGGYVWIFPKGDKTANVGIGVGGDRCKPGNRPIDYLNRF 243
Query: 292 RAKDKILGGKIIRVEAHPIPE-HPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRM 350
A++ GK I + A + P P ++ + +VGDAA +G GIY A +G++
Sbjct: 244 VARN-FPNGKTIELIAGGVSICQPLPCTVANNLMIVGDAARVSDPLTGGGIYAALYTGKL 302
Query: 351 CAEAIIEGSENGTRMIDEGDLR-KYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
+ G++ I++GD + L +D+T+ +Y L K R+ +E FV++
Sbjct: 303 AGDV-------GSKAIEKGDTSTQALMPYDETWRASY-----LGKALERNYQIKEVFVKL 350
Query: 410 CADEY------VQKMTFDSY----LYKRVVPGNPLEDLKLAVNTIGSLV 448
D+ V KM + L K ++ NP +KL + SL+
Sbjct: 351 NDDDLNAIVHSVSKMNLSDFNTLNLIKNIIAANPKLAIKLGKAGLKSLL 399
>gi|386001770|ref|YP_005920069.1| digeranylgeranylglycerophospholipid reductase [Methanosaeta
harundinacea 6Ac]
gi|357209826|gb|AET64446.1| Digeranylgeranylglycerophospholipid reductase [Methanosaeta
harundinacea 6Ac]
Length = 391
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 157/379 (41%), Gaps = 49/379 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEF-DLPLDIID 109
+ V+G GPAG A+ A+ G++ L+E++ + P C + + + D I
Sbjct: 5 LVVVGAGPAGSMTAKAAAEAGLDVVLLEKRQEIGDPVRCAEGVSKAALKKLVDPDPTWIS 64
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVIN-----GL 164
+V ++ P + I + E ++ R+V D L + A + GA V+ L
Sbjct: 65 AEVKGARIRGPDGTEIVISEDRAGAEVGYVLERKVFDRALAQEAAEAGAKVMVKTRALDL 124
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK------SIN 218
+ +P + +GE +E V+GADG S+V + ++
Sbjct: 125 LWEGGVPAGVTAQF-------------IGESLRIEAPLVVGADGVESKVGRWAGIDTALK 171
Query: 219 AGDYDYAIAFQ-ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTV 276
D + F + KI D+ V+ Y+G++++P Y W FPK +A VG G +
Sbjct: 172 PKDIETCAQFLVQDDKIDDDYCVF-------YLGNEIAPGGYVWSFPKGPSLANVGIGVL 224
Query: 277 THKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAGYVTK 335
K D R K GK++ + A +P P ++ V LVGDAA
Sbjct: 225 GSKADSGTPIRLLREFMKKNFPDGKVLEMMAGGVPVSGPIEATVADGVILVGDAARQSDP 284
Query: 336 CSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKV 395
+G GI ++G M E + G +D+ L+ Y + W +T + K
Sbjct: 285 ITGGGIINGMRAGVMAGEIAADLVPKGE--VDKRSLQVYEKGWRET----------IGKS 332
Query: 396 FYRSNPAREAFVEMCADEY 414
R+ +E FV++ D+
Sbjct: 333 ITRNFAVKEFFVDLTDDDL 351
>gi|227500384|ref|ZP_03930446.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Anaerococcus tetradius ATCC 35098]
gi|227217447|gb|EEI82766.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Anaerococcus tetradius ATCC 35098]
Length = 435
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 155/356 (43%), Gaps = 54/356 (15%)
Query: 45 KLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC--KPCGGAIPLCMVGEFD 102
K++ V ++GGG AG AA+ LA+N E L+ER D C K G E
Sbjct: 4 KMSEDKFDVIIVGGGVAGLAASIVLAENDFEVLLVERG-DYCGAKNVTGGRLYGHSLEKI 62
Query: 103 LPLDI----IDRKVTKMKM-ISPSNVAVDIGQTLK-------PHEYIGMVRREVLDAYLR 150
+P I+RKV K K+ + + ++DIG + K Y+ V D YL
Sbjct: 63 IPNFADEAPIERKVVKEKISMMSAKSSLDIGYSSKELGKDKDSSSYV--VLHSKFDQYLA 120
Query: 151 ERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEK-RTLEVDAVIGADGA 209
E+AE+ G ++I G+ + L DG G+ + DAVI ADG
Sbjct: 121 EKAEEAGVAIITGVLVDEILVE-------------DGKVVGINATGEEMYADAVIVADGV 167
Query: 210 NSRVAKSINAGD----YDYAIAFQERVKIPDE------KMVYYENLAEMYVGDDVSPDF- 258
NS +++ + A+ +E +++ +E + E ++ + GD F
Sbjct: 168 NSLLSQQLGVKKELEPNQVAVGAKEVIELSEEIINERFNLESGEGMSWLSCGDPTMGGFG 227
Query: 259 YGWVFPKCDHVAVG-TGTVTHKG--DIKKFQLATRNRAKDK----ILGGKIIRVEAHPIP 311
G+++ D +++G T++ G + L R + + I GGK I AH +P
Sbjct: 228 GGFIYTNKDSISIGVVATLSDIGYANTSINDLLERFKEHESVAPFIKGGKTIEYSAHLVP 287
Query: 312 E---HPRPRRLSGRVALVGDAAGYVTKC--SGEGIYFAAKSGRMCAEAIIEGSENG 362
E H P +VGDAAG+ + G+ FA +SGR+ A ++I E G
Sbjct: 288 EEGLHMIPELFGDGFLVVGDAAGFCVNLGYTVRGMDFAIESGRLAALSLIAAKERG 343
>gi|14590116|ref|NP_142180.1| hypothetical protein PH0181 [Pyrococcus horikoshii OT3]
gi|74570493|sp|O57920.1|GGR_PYRHO RecName: Full=Digeranylgeranylglycerophospholipid reductase;
Short=DGGGPL reductase; AltName:
Full=2,3-di-O-geranylgeranylglyceryl phosphate
reductase; AltName: Full=Geranylgeranyl reductase;
Short=GGR
gi|3256567|dbj|BAA29250.1| 393aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 393
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 165/374 (44%), Gaps = 39/374 (10%)
Query: 66 AETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLD--IIDRKVTKMKMISPS 121
A +AK G L+++K + K C + + +FD+P D I+R++ K+ SPS
Sbjct: 18 ARNVAKAGFSVLLVDKKPAIGAPKQCAEGLTINAFKQFDIPYDKRFINREIYGAKIYSPS 77
Query: 122 NVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVL 180
+ L+ E G++ R+V D L A K GA V+ + V+
Sbjct: 78 GYTAE----LRYKEVSGVILERKVFDKMLAYYAAKAGAEVL-------------ARTEVV 120
Query: 181 YYTEYDGTKGGV-----GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIP 235
+G GV GE +E ++ ADG S +A+ AG YA +
Sbjct: 121 DVIRREGKIVGVKAKHEGEPMEIEAKVIVAADGVESTIARK--AGIDTYAPPHEFDSGYE 178
Query: 236 DEKMV--YYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVGTGTVTHKGDIKKFQLATRNR 292
E ++ + +L ++ G++V+P Y WVFPK D VG G + K+ L +
Sbjct: 179 YEMIIEGFDPDLIHLFFGNEVAPRGYVWVFPKDEDRANVGIGINSDNEKTAKYYL-DKWL 237
Query: 293 AKDKILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVTKCSGEGIYFAAKSGRMC 351
++ I KI+ V IP + L V +VGDAA V G G+ A K+ +
Sbjct: 238 KENNIPRNKILEVNVGLIPVGGFVKELVKENVLVVGDAARQVNPIHGGGMAEAMKASTIA 297
Query: 352 AEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR-SNPAREAFVEMC 410
++ II+ E L+ Y E+W KT P + L L++ + ++ + FV++
Sbjct: 298 SKWIIKALEEENLE----LLKNYKEEWWKTEGPRMEKLLRLRRAMEKLTDEDLDVFVQLV 353
Query: 411 ADEYVQKMTFDSYL 424
+ ++K+ +Y+
Sbjct: 354 SGTDLEKIAGGNYI 367
>gi|89895814|ref|YP_519301.1| oxidoreductase [Desulfitobacterium hafniense Y51]
gi|423076594|ref|ZP_17065302.1| FAD dependent oxidoreductase [Desulfitobacterium hafniense DP7]
gi|89335262|dbj|BAE84857.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|361852399|gb|EHL04659.1| FAD dependent oxidoreductase [Desulfitobacterium hafniense DP7]
Length = 356
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 151/330 (45%), Gaps = 51/330 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP-------CGGAIP---LCMVGEFD 102
V +IG GPAG + A + + +R L N P CGG + M+ +
Sbjct: 4 VLIIGAGPAGSSLARLIGDKYKVLLIDKRDLANENPHNLAGKCCGGLLAPDAQKMIAKLG 63
Query: 103 L--PLDI-IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREV---LDAYLRERAEKN 156
L P DI ++ ++ ++ I +N + Q Y+ M R + L + L ++ +K
Sbjct: 64 LGIPKDILVNPQLFAVRTIDLTNNLERLYQRF----YLNMDREKFDRWLVSILPKKVDKK 119
Query: 157 GASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS 216
SV G +++P +E Y+ G++ + + A+IGADGA S++ +
Sbjct: 120 FNSVFKGF---VEIPGGYEIRYI-----------HNGQEISAKTKAIIGADGAFSKLRRF 165
Query: 217 INA--GDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTG 274
+N + IA QE + P + Y+ + D+ DFY W+ PK +++ +G+
Sbjct: 166 LNQDINSPEKYIAIQEWYECP-HHVPYFTA-----IFDEEISDFYSWIIPKENYLLLGSA 219
Query: 275 TVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS----GR--VALVGD 328
+ +K++L + IR E + RP+++S GR +ALVG+
Sbjct: 220 LKPKEKAREKYELLKTKLTQRGFNFDNKIRTEGAYLY---RPKKVSQFYAGRDSIALVGE 276
Query: 329 AAGYVTKCSGEGIYFAAKSGRMCAEAIIEG 358
AAG ++ S EGI +A KS A+++ EG
Sbjct: 277 AAGGISPSSAEGISYALKSSAYLAQSLEEG 306
>gi|150401729|ref|YP_001325495.1| geranylgeranyl reductase [Methanococcus aeolicus Nankai-3]
gi|209572859|sp|A6UWL1.1|GGR_META3 RecName: Full=Digeranylgeranylglycerophospholipid reductase;
Short=DGGGPL reductase; AltName:
Full=2,3-di-O-geranylgeranylglyceryl phosphate
reductase; AltName: Full=Geranylgeranyl reductase;
Short=GGR
gi|150014432|gb|ABR56883.1| geranylgeranyl reductase [Methanococcus aeolicus Nankai-3]
Length = 391
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 170/401 (42%), Gaps = 54/401 (13%)
Query: 45 KLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFD 102
+L + V VIG GP G A+ + NG +T LI++ + P C A+P + EF
Sbjct: 3 ELLDSEYDVIVIGAGPGGSMASYHSSINGAKTLLIDKSQEIGTPVRCAEAVP--YLDEFG 60
Query: 103 LPLD--IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV 160
+ D I K+ +++P+ + I + K Y+ V R++ D +L R+ G +
Sbjct: 61 INPDPSFIRSKIDGGILVAPNGKKI-IVKGGKTQGYV--VERKIFDKHLAVRSANVGTKI 117
Query: 161 -INGLFMKMDLPRNFEQPYVLYYTEYDGTKGGV-----GEKRTLEVDAVIGADGANSRVA 214
I + +D YDG K V G+ ++ VI ADG S +A
Sbjct: 118 AIKSRVVGLD---------------YDGEKYTVIVNHLGQIYAIKAKIVIAADGVESSIA 162
Query: 215 K--SINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVG 272
+ I I ++ + K++ +N+ E Y G D+ P Y W+FPK + VG
Sbjct: 163 EMAGIKCKKKVTEICSCAEYEMTNVKLL-DKNMMEFYFG-DICPKGYVWIFPKGETANVG 220
Query: 273 TGTVTHKGDIKKFQLATRNR-AKDKILGGKI-------IRVEAHPIPEHPRPRRLSGRVA 324
G + D KK + N + +L G++ + P+ P + ++
Sbjct: 221 LGII----DSKKKAIDYLNEFLEHPLLEGRLDNATPIEFKCGGAPVG-GPIEKTVADNFM 275
Query: 325 LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWP 384
+VGDAAG ++ SG GIY + G + + + G + E L +Y +W + Y+
Sbjct: 276 VVGDAAGQISPISGGGIYLSLSCGSIAGK--VAGEAIKSNNCSEDYLVEYENRWKEKYYK 333
Query: 385 T----YKVLDVLQKVFYRS-NPAREAFVEMCADEYVQKMTF 420
K VLQK + N +A E + V K+ F
Sbjct: 334 LLMDELKYKKVLQKFSEKELNALADAMDERLEEIDVAKIAF 374
>gi|315230418|ref|YP_004070854.1| geranylgeranyl reductase [Thermococcus barophilus MP]
gi|315183446|gb|ADT83631.1| geranylgeranyl reductase [Thermococcus barophilus MP]
Length = 397
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 151/346 (43%), Gaps = 48/346 (13%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLD--II 108
V V+G G AG + LAK G +I++K + P CG + + ++D+PLD I
Sbjct: 7 VVVVGAGIAGPILSRNLAKKGYSVLMIDKKAEIGTPKRCGEGLGIEAFKKYDIPLDRRFI 66
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVIN----- 162
+R++ + SPS ++I + G++ R++ D L A K GA V+
Sbjct: 67 NREIYGAAIYSPSGYRLEI----RYDRVAGVILERKIFDKMLAYYAAKAGADVMAKTEAV 122
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGV-----GEKRTLEVDAVIGADGANSRVAK-- 215
GL K +G GV GE + D ++ ADG SRVA+
Sbjct: 123 GLIRK------------------EGKIAGVKAKHEGEPLEIYADVIVAADGVESRVARWA 164
Query: 216 SINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVGTG 274
IN+ + I ++ E + +L +Y G++++P Y W+FPK D VG G
Sbjct: 165 GINSFLPPHEIDSAYEYEMIIENFEFDPDLIHLYFGNNIAPRGYVWIFPKDEDRANVGIG 224
Query: 275 TVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYV 333
K+ L + ++ I G KI+ V +P + L V +VGDAA V
Sbjct: 225 INGDNPKTAKYYL-EKWLKENNIKGTKILEVNVGGVPVGGFLKELVKDNVVVVGDAARQV 283
Query: 334 TKCSGEGIYFAAKSGRMCAEAIIEG-SENGTRMIDEGDLRKYLEKW 378
G G+ A ++ + ++ I + SE + L+ Y E+W
Sbjct: 284 NPMHGGGMAEAMEAATIASKWIDKALSEENLEL-----LKGYTEEW 324
>gi|289191793|ref|YP_003457734.1| geranylgeranyl reductase [Methanocaldococcus sp. FS406-22]
gi|288938243|gb|ADC68998.1| geranylgeranyl reductase [Methanocaldococcus sp. FS406-22]
Length = 391
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 150/325 (46%), Gaps = 30/325 (9%)
Query: 70 AKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDL-PLDIIDRKVTKMKMI-SPSNVAV 125
AKNG +T LIE+ + +P C AIP + EF + P R + K ++ SPS V
Sbjct: 27 AKNGTKTLLIEKSQEIGEPVRCAEAIP--SIEEFGIKPKPEFVRNIIKGGILFSPSGKKV 84
Query: 126 DIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEY 185
+ Q K YI V R++ D YL RA K GA V + L R+ + V+ E+
Sbjct: 85 TVTQD-KAQGYI--VERKIFDKYLAIRAAKAGAKVAVKT-TAIGLERDGDYWNVI--VEF 138
Query: 186 DGTKGGVGEKRTLEVDAVIGADGANSRVAK--SINAGDYDYAIAFQERVKIPDEKMVYYE 243
+GE+ ++ VI ADG S +A+ + A I ++ + +++ +
Sbjct: 139 ------LGEEYVIKTKVVIAADGVESNIAEYAGLKAKKKPLEICSCAEYEMTNVELL-DK 191
Query: 244 NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKF--QLATRNRAKDKILGGK 301
N+ E Y G++V+P Y W+FPK + VG G K + + AKD++
Sbjct: 192 NMMEFYFGNEVAPGGYVWIFPKGETANVGLGVRDKKKKAIDYLEEFIENGLAKDRLKDAT 251
Query: 302 IIRVEAHPIP-EHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
I + P P + + V +VGDAAG ++ +G GIY A G + E +
Sbjct: 252 PIEFKVGGAPVSGPIEKTYTDGVLVVGDAAGQISPLTGGGIYLAMDCGLIAGEV----AS 307
Query: 361 NGTRMID--EGDLRKYLEKWDKTYW 383
++ D E L++Y +W + ++
Sbjct: 308 KAIKLNDWSEETLKEYERRWKEKHY 332
>gi|389852062|ref|YP_006354296.1| hypothetical protein Py04_0619 [Pyrococcus sp. ST04]
gi|388249368|gb|AFK22221.1| hypothetical protein containing geranylgeranyl hydrogenase domain
[Pyrococcus sp. ST04]
Length = 370
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 135/308 (43%), Gaps = 30/308 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPLCMVGEFDLPLDIIDRK 111
V +IGGGP G A L+ ++ ++ERK K C G I M LP +
Sbjct: 5 VLIIGGGPVGNYLASLLSGK-LDVAVVERKGSFGGKACTGIIGAEMYEALGLPEKAVLNA 63
Query: 112 VTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLP 171
IS +V +I + P Y +V R++L+ L +RA + GA + L
Sbjct: 64 YNGAYFISKGSV-FEISRK-NPQAY--LVDRKILERELAKRAIRRGA--------EYYLA 111
Query: 172 RNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQER 231
NF L + + + +E + +GADG NS VA++I + E
Sbjct: 112 TNF-----LRFKNGKALVQHLDSQFEIEAEVYVGADGVNSAVARNIGTKTEGEVLKGWEL 166
Query: 232 VKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRN 291
+ + + E++V D++P+F+ WV P + A GT + KF L R
Sbjct: 167 EVLGN----FKRERVEVWVNKDINPEFFFWVAPINEEEA-RVGTFGSIDALAKF-LKLR- 219
Query: 292 RAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMC 351
+I GG I+ ++ + R + G +AL+GDAA + + GI F A R+
Sbjct: 220 ----RIKGGNILEFKSGAVILGWRKPWVKGNIALLGDAALQIKPTTAGGIVFGAYCARVL 275
Query: 352 AEAIIEGS 359
A+AI+ G+
Sbjct: 276 AKAILTGN 283
>gi|291455546|ref|ZP_06594936.1| hydrogenase [Streptomyces albus J1074]
gi|359147441|ref|ZP_09180748.1| hydrogenase [Streptomyces sp. S4]
gi|421744564|ref|ZP_16182539.1| geranylgeranyl reductase family protein [Streptomyces sp. SM8]
gi|291358495|gb|EFE85397.1| hydrogenase [Streptomyces albus J1074]
gi|406687058|gb|EKC91104.1| geranylgeranyl reductase family protein [Streptomyces sp. SM8]
Length = 407
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 133/309 (43%), Gaps = 51/309 (16%)
Query: 77 FLIER-KLDNCKPCGGAIPLCMVGE--------FDLPLDIIDRKVTKMKMISPSNVAVDI 127
L+E+ +L K CGG I +G FDLPL R VT ++
Sbjct: 40 LLLEKAELPRYKTCGGGI----IGPSRDNLPPGFDLPLQDRVRAVT-------FSLDGRF 88
Query: 128 GQTLKPHEYI-GMVRREVLDAYLRERAEKNGASVING---LFMKMDLPRNFEQPYVLYYT 183
+T + + + G+V R D L E A+K GA + G L ++ P ++ V +
Sbjct: 89 ARTRRSRQMLFGLVNRPEFDQRLVEAAQKAGAELRTGATVLRVEQHGPAVPDRRTVAVFV 148
Query: 184 EYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYE 243
+ G GG E+ TL AV+GADG+ SR+ + + + + +P E
Sbjct: 149 QTSG-PGGEREEETLLARAVVGADGSASRIGAHVGVKLDQVDLGLEAEIPVP-------E 200
Query: 244 NLAEMYVGDDV-----SPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKIL 298
+AE + G + P YGWVFPK D + VG + +G K L T A+ +
Sbjct: 201 TVAEDWQGRVLIDWGPMPGSYGWVFPKGDTLTVGVISARGEGAATKRYL-TDFIARLGLA 259
Query: 299 G-------GKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMC 351
G G + R P GRV + GDAAG + + EGI +A +SGR+
Sbjct: 260 GFEPSLSSGHLTRCRTDDSPLS------RGRVVVCGDAAGLLEPWTREGISYALRSGRLA 313
Query: 352 AEAIIEGSE 360
E + +E
Sbjct: 314 GEWALRIAE 322
>gi|337287924|ref|YP_004627396.1| geranylgeranyl reductase [Thermodesulfobacterium sp. OPB45]
gi|334901662|gb|AEH22468.1| geranylgeranyl reductase [Thermodesulfobacterium geofontis OPF15]
Length = 389
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 141/334 (42%), Gaps = 37/334 (11%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDIIDR 110
V VIGGGPAG A+ L + G++ ++E K + K C G + +FD+ D I R
Sbjct: 10 VIVIGGGPAGLYTAKILGEAGLDVLVLEEKEEIGKNILCTGIVSKEFFEKFDISKDSIIR 69
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-INGLFMKMD 169
++ +K+ISP ++ + P Y+ + R D L A+ G + ++
Sbjct: 70 EIRTVKLISPFGTSILYTHS-SPLAYV--IDRGKFDTTLFIDAKSKGVEFRFSYKVFDIN 126
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
+ RN + ++ K + +I A G R+ K + DY + F
Sbjct: 127 ILRNGVEVITQNLKDFQVEK--------FKGKMIILATGFRIRLCKKLGL---DYPVNF- 174
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLAT 289
+K +K+ E+ + G +S +GW+ P+ ++ A G +T + F
Sbjct: 175 --LKGAQKKVKLKEDFVTIITGSSISKGGFGWIVPEKENFA-RVGLITEGSPREGF---- 227
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
+N AK + + V PI + + R+ VG+ AG V +G GIYF G
Sbjct: 228 KNLAKSYLFTEDLEEVRYKPIAQGLVSKTFGERIISVGECAGQVKTTTGGGIYF----GL 283
Query: 350 MCAEAIIEGSENGTRMIDEGD-----LRKYLEKW 378
+CAE E + +GD L Y +KW
Sbjct: 284 ICAEI---AGEEVLKAFKKGDFSSERLSSYDKKW 314
>gi|83589309|ref|YP_429318.1| geranylgeranyl reductase [Moorella thermoacetica ATCC 39073]
gi|83572223|gb|ABC18775.1| Geranylgeranyl reductase [Moorella thermoacetica ATCC 39073]
Length = 341
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 120/303 (39%), Gaps = 29/303 (9%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDIIDRKV 112
V G GPAG AA +A G LIE++ P C +P + E D I V
Sbjct: 8 VAGAGPAGSTAARVVAAAGARVLLIEKRARVGYPVQCAEYVPALIASEVDFGEKSIALAV 67
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPR 172
+ P + T P YI + REV DA L E A K GA L++K +
Sbjct: 68 GTLVTFFPDGT---VTSTPAPG-YI--LNREVFDASLAEGAVKAGAE----LWLKATVED 117
Query: 173 NFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERV 232
+ ++ G ++ +E +IGADG S VA++ A A Q +
Sbjct: 118 LTDTSLIIRQAN--------GRRQEVEAGVIIGADGPLSLVARTRGWPRATLAAAVQVEM 169
Query: 233 KIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNR 292
+P+ V +Y G Y WVFPK VG G V G+I T
Sbjct: 170 ALPEPMQVTRVYFDPLYRGG------YAWVFPKGKTANVGVGLV--PGEITPAAALTHFL 221
Query: 293 AKDKILGGKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMC 351
+ I+R IP P GRV L GDA G+ +G GI A SGR+
Sbjct: 222 RRLGWQQQNIVRRTGGLIPVAGPYQEVHRGRVLLCGDAGGFTHPVTGAGILTAILSGRLA 281
Query: 352 AEA 354
EA
Sbjct: 282 GEA 284
>gi|91772422|ref|YP_565114.1| geranylgeranyl reductase [Methanococcoides burtonii DSM 6242]
gi|121684490|sp|Q12YW2.1|GGR1_METBU RecName: Full=Digeranylgeranylglycerophospholipid reductase 1;
Short=DGGGPL reductase 1; AltName:
Full=2,3-di-O-geranylgeranylglyceryl phosphate reductase
1; AltName: Full=Geranylgeranyl reductase 1; Short=GGR 1
gi|91711437|gb|ABE51364.1| Oxidoreductase with FAD-binding domain [Methanococcoides burtonii
DSM 6242]
Length = 408
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 152/350 (43%), Gaps = 45/350 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CG-GAIPLCMVGEFDLPLDIID 109
+ V+G GPAG AA T AK G+ ++E++ + +P C G + +L +
Sbjct: 7 LVVVGAGPAGSIAATTAAKKGLSVLMLEKRQEIGEPVRCAEGVGKKRLRQHIELDEKWLC 66
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----INGL 164
+V+ K+ISP+ + + + E ++ R++ D L E + + G + + GL
Sbjct: 67 GEVSSAKIISPNGTTLTMAEEDAGSEVGYVLDRKIFDRTLVELSGEAGVDIMVKARVTGL 126
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK------SIN 218
++ + E + +G+ ++ VIGADG S+V + S+
Sbjct: 127 IIEENTVCGVEMMH-------------LGKTYSIRSKLVIGADGVESKVGRWAGIDTSLK 173
Query: 219 AGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVT 277
+ F D+ Y+ Y+G+ V+P Y WVFPK +++A VG G +
Sbjct: 174 PSHIETCAQFLVSGVDIDQSSCYF------YMGNKVAPGGYVWVFPKGNNMANVGIGILG 227
Query: 278 HKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEH-PRPRRLSGRVALVGDAAGYVTKC 336
+ KK + + G II A +P P + ++ + LVGDAA
Sbjct: 228 SRAGEKKPIEYLTDFVEANYPNGSIIEQVAGAVPASGPIEKTIANGLMLVGDAARQSDPF 287
Query: 337 SGEGIYFAAK----SGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTY 382
+G GI A +G + AEAI + + E L+KY ++W ++
Sbjct: 288 TGGGISNAMDAGLYAGEVAAEAIAQDD------VSEKILQKYEKRWRGSF 331
>gi|15668712|ref|NP_247511.1| bacteriochlorophyll synthase 43 kDa subunit ChlP
[Methanocaldococcus jannaschii DSM 2661]
gi|2493699|sp|Q57952.1|GGR_METJA RecName: Full=Digeranylgeranylglycerophospholipid reductase;
Short=DGGGPL reductase; AltName:
Full=2,3-di-O-geranylgeranylglyceryl phosphate
reductase; AltName: Full=Geranylgeranyl reductase;
Short=GGR
gi|1591235|gb|AAB98523.1| bacteriochlorophyll synthase 43 kDa subunit (chlP)
[Methanocaldococcus jannaschii DSM 2661]
Length = 391
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 151/325 (46%), Gaps = 30/325 (9%)
Query: 70 AKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDL-PLDIIDRKVTKMKMI-SPSNVAV 125
AKNG +T LIE+ + +P C AIP + EF L P R + K ++ SPS V
Sbjct: 27 AKNGAKTLLIEKSQEIGEPVRCAEAIP--SIEEFGLKPEPEFVRNIIKGGILFSPSGKKV 84
Query: 126 DIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEY 185
+ Q K Y+ V R++ D YL RA K GA V + L R+ + V+ E+
Sbjct: 85 TVTQD-KAQGYV--VERKIFDKYLAIRAAKAGAKVAVKT-TAIGLERDGDYWNVI--VEF 138
Query: 186 DGTKGGVGEKRTLEVDAVIGADGANSRVAK--SINAGDYDYAIAFQERVKIPDEKMVYYE 243
+GE+ ++ VI ADG S +A+ + A I ++ + +++ +
Sbjct: 139 ------LGEEYVIKTKVVIAADGVESNIAEYAGLKAKKKPLEICSCAEYEMTNVELL-DK 191
Query: 244 NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKF--QLATRNRAKDKILGGK 301
N+ E Y G++V+P Y W+FPK + VG G K ++ + AKD++
Sbjct: 192 NMMEFYFGNEVAPGGYVWIFPKGETANVGLGVRDKKKKAIEYLEEFIENGLAKDRLKDAT 251
Query: 302 IIRVEAHPIP-EHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
I + P P + + + +VGDAAG ++ +G GIY A G + E +
Sbjct: 252 PIEFKVGGAPVSGPIEKTYTDGLLVVGDAAGQISPLTGGGIYLAMDCGLIAGEV----AS 307
Query: 361 NGTRMID--EGDLRKYLEKWDKTYW 383
++ D E L++Y +W + ++
Sbjct: 308 KAIKLNDWSEETLKEYERRWKEKHY 332
>gi|383788638|ref|YP_005473207.1| hypothetical protein CSE_09780 [Caldisericum exile AZM16c01]
gi|381364275|dbj|BAL81104.1| hypothetical protein CSE_09780 [Caldisericum exile AZM16c01]
Length = 371
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 153/360 (42%), Gaps = 60/360 (16%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPLCMVGEFDLPLDIIDR- 110
V +IGGGPAG A L + +E+ +IE+ K C G +P + LP+ + D
Sbjct: 6 VIIIGGGPAGATLAHFLGEYNIESLVIEKGHHFRDKVCAGGLPKGIFS--ILPVSVKDNF 63
Query: 111 -----KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
K+ K+ VA +I KP Y V R+ D +LR+ G ++
Sbjct: 64 SYSSYKLFKV-FYKGKLVASEIFD--KPFAY--GVMRDQFDEHLRQ-----GITI----- 108
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGV---GEKRTLEVDAVIGADGANSRVAKSINAGDY 222
++ + +V Y+ K G+ +K + ++GADG S V+ ++ +
Sbjct: 109 -------HYNEKFV----SYEENKNGIVVKTDKNIYKGKLLVGADGIGSMVS-VLSGLNK 156
Query: 223 DYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDI 282
I E +IP + +E +++GD P YGW F K + +VG G +
Sbjct: 157 KTKIVIAEEKEIPKKD---HEESLNVFLGD--FPLGYGWKFNKDNVSSVGAGALK----- 206
Query: 283 KKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVTKCSGEGI 341
K ++ N ++ V+ +PI R L GR+ LVG+A V + GI
Sbjct: 207 KHYKKGLSN-----LIDNTYTLVKTYPISLWDRDISLFKGRIVLVGEAGSIVDPFNAAGI 261
Query: 342 YFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNP 401
Y + S ++ AE+I E E G Y+EK +T + +K +L FY P
Sbjct: 262 YHSIYSSKLLAESIKENFERGII-----SFENYIEKLSETIFEEFKYALILSSAFYPMLP 316
>gi|227486383|ref|ZP_03916699.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Anaerococcus lactolyticus ATCC 51172]
gi|227235564|gb|EEI85579.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Anaerococcus lactolyticus ATCC 51172]
Length = 431
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 162/353 (45%), Gaps = 54/353 (15%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC--KPCGGAIPLCMVGEFDL 103
++ V ++GGG AG AA+ LA+N +E L+ER D C K G E +
Sbjct: 1 MSEDKFDVIIVGGGVAGLAASIVLAENDLEVLLVERG-DYCGAKNVTGGRLYGHSLEKII 59
Query: 104 PLDI----IDRKVTK--MKMISPSNVAVDIGQTLK-------PHEYIGMVRREVLDAYLR 150
P I+RKV K + M+S + ++DIG + K Y+ V D YL
Sbjct: 60 PNFADEAPIERKVVKERISMMSEKS-SLDIGYSSKELGENKDSSSYV--VLHSKFDQYLA 116
Query: 151 ERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGAN 210
E+AE+ G ++I G+ ++ L E+ V+ D T GE+ + DAVI ADG N
Sbjct: 117 EKAEEAGVAIITGVLVEKLL---LEEGKVV---GIDAT----GEE--MYADAVIIADGVN 164
Query: 211 SRVAKSINAGD----YDYAIAFQERVKIPDE------KMVYYENLAEMYVGDDVSPDF-Y 259
S +++ I A+ +E +++ +E + E ++ + G F
Sbjct: 165 SLLSQQIGIKKELEPNQVAVGAKEVIELSEEIINERFNLESGEGMSWLSCGAPTMGGFGG 224
Query: 260 GWVFPKCDHVAVG-TGTVTHKG--DIKKFQLATRNRAKDK----ILGGKIIRVEAHPIPE 312
G+++ D V++G T++ G + K L R + D I GGK I AH +PE
Sbjct: 225 GFIYTNKDSVSIGVVATLSDIGYSNTKLTDLLERFKEHDSVAPFIKGGKTIEYSAHLVPE 284
Query: 313 ---HPRPRRLSGRVALVGDAAGYVTKC--SGEGIYFAAKSGRMCAEAIIEGSE 360
H P+ +VGDAAG+ + G+ FA +SGR+ A AI+ E
Sbjct: 285 EGIHMVPQIYGDGFLVVGDAAGFCINLGYTVRGMDFAIESGRLAALAILRAKE 337
>gi|254382450|ref|ZP_04997809.1| electron transfer oxidoreductase [Streptomyces sp. Mg1]
gi|194341354|gb|EDX22320.1| electron transfer oxidoreductase [Streptomyces sp. Mg1]
Length = 419
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 162/372 (43%), Gaps = 40/372 (10%)
Query: 40 AKTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCG-GAIPLCM 97
A T P L+ + V V+G GPAG A LAK G++ L+E+ K CG G P
Sbjct: 22 AVTEP-LSEHSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRAT 80
Query: 98 VGEFDLPLDIIDR----KVTKMKMISPSN-VAVDIGQTLKPHEYIGMVR-REVLDAYLRE 151
+ +DI + + +++I + +D + +Y G+VR R+ D L
Sbjct: 81 KQLVAMGIDISEEAGWLRNKGLRIIGGGQRLQLDWPELASYPDY-GLVRKRDDFDETLAR 139
Query: 152 RAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRT---LEVDAVIGADG 208
+A+K GA L+ + ++ P + T G + VGE++T V+ ADG
Sbjct: 140 QAQKAGAR----LYERCNVGEPVRDPRTGHIT---GVQAKVGEEKTAVTFSAPLVVAADG 192
Query: 209 ANSRVAKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDFYGW 261
+SR++ ++ D +A + P Y E+ E++ D + P YGW
Sbjct: 193 NSSRLSLAMGLHRREDRPMGVAVRTYFTSPRHDDDYLESWLELWDRRGAQDRLLPG-YGW 251
Query: 262 VFPKCDHVA-VGTGTVTHKGDIKKFQ----LATRNRAKDKILG------GKIIRVEAHPI 310
+F D + VG G + K+ L + + G + IR A P+
Sbjct: 252 IFGMGDGTSNVGLGILNSSSAFKELDWREVLKAWCASMPQDWGYTPENMTQPIRGAALPM 311
Query: 311 PEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGD 370
+ +P G + LVGDA G V +GEGI +A +SG++ A+ I++ T E
Sbjct: 312 AFNRQPHYTKG-LLLVGDAGGLVNPFNGEGIAYAMESGQIAADVIVQAHARATPAQRELA 370
Query: 371 LRKYLEKWDKTY 382
L Y + +TY
Sbjct: 371 LHSYPKVLKETY 382
>gi|390934419|ref|YP_006391924.1| geranylgeranyl reductase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569920|gb|AFK86325.1| geranylgeranyl reductase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 381
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 146/353 (41%), Gaps = 36/353 (10%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLDIIDRKVT 113
+IGGGPAG L+K G + LIE+ K CGG I D+ + +T
Sbjct: 6 IIGGGPAGSTLGRKLSKEGYKALLIEKHVFPRYKACGGGITKRCYKLLDIDISQYVEDIT 65
Query: 114 KMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRN 173
+ N + QT +P Y V R D YL + A G + +G
Sbjct: 66 NEIVFKFPNGKQTVLQTDEPIIY--QVDRVKFDKYLIDMAAYYGCEIHDG---------- 113
Query: 174 FEQPYVLYYTEYDGTKGGV--GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQER 231
+Y YD K V +K E ++GADG NS VA + IA +
Sbjct: 114 -----ETFYDFYDNGKSLVVMTDKGEYETKILVGADGINSNVAYKTRLINGKKGIALEGE 168
Query: 232 VKIPDEKMVYYENLAEMYVGDDVSPDF-YGWVFPKCDHVAVGTGTVTHK-GDIKKFQLAT 289
V + D ++ + L V D + + YGWVFPK D +++G GT +K +IK+
Sbjct: 169 VYV-DNSLI--DGLKGKVVVDFNAIKYGYGWVFPKGDRLSIGVGTFLNKISNIKEILSKM 225
Query: 290 RNRAKDKILGGKIIRVEAHPI--PEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
D+ + K ++ H + P+ +V L+GDA +GEGIY A +
Sbjct: 226 IEGNVDENI--KDCKIYGHQLSFPDGSDGVFNDDKVILIGDATRLADPFTGEGIYNALLT 283
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWP------TYKVLDVLQK 394
+ + +I+ +G ++E LR E W TY +D ++K
Sbjct: 284 ADISFD-VIKKHFDGECGLNEYTLRLNREIVPDIGWAYRLAQFTYNNMDFIEK 335
>gi|452205001|ref|YP_007485130.1| FAD/NAD(P)-binding oxidoreductase [Dehalococcoides mccartyi BTF08]
gi|452112057|gb|AGG07788.1| FAD/NAD(P)-binding oxidoreductase [Dehalococcoides mccartyi BTF08]
Length = 379
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 156/384 (40%), Gaps = 37/384 (9%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDI 107
N V VIG GP G A+ LA+ G E L+E+K + K C G I ++
Sbjct: 2 NTDVLVIGAGPVGLHTAKCLAECGYEVRLLEKKPEAAKQVCCTGIISTECASKYGFDGKY 61
Query: 108 IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK 167
I ++ + SP +GQ L +++R+ A + +RA + +
Sbjct: 62 IQNYFSEASVYSP------VGQKL-------LLKRDTPQAIMLDRASFQAKLLQQAINCG 108
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYD-YAI 226
+ F+ + Y +G + E ++ AV+ A G N+ ++++ G+ + +A
Sbjct: 109 VRTSFGFQANSIEYIE--NGLRITTKEGQSFTAKAVVLAAGYNTALSRATGLGEINNFAY 166
Query: 227 AFQERV--KIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKK 284
Q V IP NL+ ++ G +S ++GW+ D A G +T K +
Sbjct: 167 GLQAEVDTSIPS-------NLS-LFTGKAISQGYFGWLSSINDCTA-KMGLLTRKNPFEC 217
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
+ K ++ K I P+P RV VGD AG + +G GIYF
Sbjct: 218 WSALHNTLYKQGLITAKHINYVCRPVPIGNLSASFGDRVLAVGDFAGQLKPTTGGGIYF- 276
Query: 345 AKSGRMCAEAIIEGSENG--TRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR-SNP 401
G +CA+ + + T + + +L +Y + W + +L + + +
Sbjct: 277 ---GLLCADLAVSCLDKNIKTNKLSKANLAEYEKNWKSLIGSELYIGRLLSRAYMGIDDR 333
Query: 402 AREAFVEMCADE-YVQKMTFDSYL 424
E + CA ++KM S+L
Sbjct: 334 LLEQIFKKCATSGMIEKMAAKSHL 357
>gi|330468144|ref|YP_004405887.1| geranylgeranyl reductase [Verrucosispora maris AB-18-032]
gi|328811115|gb|AEB45287.1| geranylgeranyl reductase [Verrucosispora maris AB-18-032]
Length = 370
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 150/383 (39%), Gaps = 69/383 (18%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIP----LCMVGEFDLPL-DII 108
+IGGGPAG +AA A+ GV T ++ER K CGG + + D+P+ D +
Sbjct: 1 MIGGGPAGLSAAFAAARRGVRTLVLERAAHPRYKTCGGGLTGISFAAVATRIDVPVHDAV 60
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
D + + + +P + MVRR+ D LR A GA V + +
Sbjct: 61 DEVTFTL------DGRRSFTRRHRPGALVRMVRRDEFDDRLRAAAVAAGAEVRERVTV-- 112
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
R +Q DG + + + T+ V+GADG++ A+ + +
Sbjct: 113 ---RAVDQ-------TPDGVRLRLADDATVLARTVVGADGSSGVSARHVGVRYRQVDLGL 162
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD------- 281
+ + + ++ + M + P Y WVFPK D ++VG + +GD
Sbjct: 163 ELELPVSPQQQARWRR--RMLLDWGPLPGSYAWVFPKADRLSVGV--IAGRGDGERTREY 218
Query: 282 ----IKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCS 337
+ + LA + D G + R A P GRV + GDAAG + S
Sbjct: 219 LRRFVDRLGLAGVSPVHDT---GHLTRCRAEDSPLR------RGRVLVAGDAAGLLEPWS 269
Query: 338 GEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFY 397
EGI FA +SG + EA+ DL Y + P + L++VF
Sbjct: 270 REGISFALRSGELAGEAVA-----------AADLTGYESAVQQRLMPAIRAGHRLREVFA 318
Query: 398 R----------SNPAREAFVEMC 410
+ + P AF C
Sbjct: 319 QRPEFFHLALGTPPGWRAFTRFC 341
>gi|302536165|ref|ZP_07288507.1| electron transfer oxidoreductase [Streptomyces sp. C]
gi|302445060|gb|EFL16876.1| electron transfer oxidoreductase [Streptomyces sp. C]
Length = 427
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 164/386 (42%), Gaps = 41/386 (10%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCG-GAIPLCMVGEFDL 103
LT + V V+G GPAG A LAK G++ L+E+ K CG G P +
Sbjct: 5 LTEHSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVAM 64
Query: 104 PLDIIDR----KVTKMKMISPSN-VAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNG 157
+D+ + + +++I + +D + +Y G+VR R+ D L +A+K G
Sbjct: 65 GIDVSEEAGWLRNKGLRIIGGGQRLQLDWPELASYPDY-GLVRKRDDFDETLARQAQKAG 123
Query: 158 ASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRT---LEVDAVIGADGANSRVA 214
A L+ + ++ P + T G + +GE +T V+ ADG +SR++
Sbjct: 124 AR----LYERCNVGEPVRDPRTGHIT---GVQAKLGEDKTPVTFHAPLVVAADGNSSRLS 176
Query: 215 KSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDFYGWVFPKCD 267
++ D +A + P Y E+ E++ D + P YGW+F D
Sbjct: 177 LAMGLHRREDRPMGVAVRTYFTSPRHDDDYLESWLELWDRRGPQDRLLPG-YGWIFGMGD 235
Query: 268 HVA-VGTGTVTHKGDIKKFQLATRNRAKDKILG----------GKIIRVEAHPIPEHPRP 316
+ VG G + K+ +A + + IR A P+ + +P
Sbjct: 236 GTSNVGLGILNSSSAFKELDWREVLKAWCASMPEDWGYTPENMTQPIRGAALPMAFNRQP 295
Query: 317 RRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLE 376
G + LVGDA G V +GEGI +A +SG++ AE I++ T E L Y +
Sbjct: 296 HYTKG-LLLVGDAGGLVNPFNGEGIAYAMESGQIAAEVIVQAHARATPAQRELALHNYPK 354
Query: 377 KWDKTYWPTYKVLDVLQKVFYRSNPA 402
+TY Y + K+ NPA
Sbjct: 355 VLKETYGGYYTLGRAFVKLI--GNPA 378
>gi|410669309|ref|YP_006921680.1| geranylgeranyl reductase [Methanolobus psychrophilus R15]
gi|409168437|gb|AFV22312.1| geranylgeranyl reductase [Methanolobus psychrophilus R15]
Length = 396
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 142/358 (39%), Gaps = 66/358 (18%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIP-------LCMVGEF-- 101
+ V+G GPAG AA AK G+ L+++K D P CGG +P L E
Sbjct: 9 IIVVGAGPAGSTAAMYAAKRGISVLLVDKKKDIGTPLQCGGFLPHYETLHELVPNAELPS 68
Query: 102 ---DLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGA 158
++P I + + I+P G + H + R D +L +A K GA
Sbjct: 69 TLEEIPSGCIHATTSYQRFIAPD------GYSKGFHVNADAIDRRRFDKHLARQAAKAGA 122
Query: 159 SVINGLFMKMDLPRNFEQPYVLYYTEYDGTK----GGVGEKRTLEVDAVIGADGANSRVA 214
++ G + TE GT+ G GE ++ +IGADG NS VA
Sbjct: 123 HLLVGTNV----------------TEVRGTELMMDGAFGE-FIVKGKVIIGADGPNSIVA 165
Query: 215 KSIN----AGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA 270
K+ N A AF+ + D EMY G + P Y W+ + D A
Sbjct: 166 KANNMLRGADPMGTGTAFEYEISGADAD----REAVEMYFGKEYVPGGYAWIISQGDDTA 221
Query: 271 -VGTGT--------VTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPR-RLS 320
+G G + + + KF + A K+ G I+ V A +P P+ +
Sbjct: 222 NIGVGIREAMFGQGMCARDYLDKF-MHEHPLASRKLEGASILSVVAGLVPVGGAPKITAT 280
Query: 321 GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKW 378
+ GDAAG++ +G GI A G++ E + E +I+ Y +W
Sbjct: 281 NDTVIAGDAAGHLIATNGGGISTAMVGGKLAGETAADHLEGRCSLIE------YDRRW 332
>gi|302521180|ref|ZP_07273522.1| electron transfer oxidoreductase [Streptomyces sp. SPB78]
gi|318057867|ref|ZP_07976590.1| oxidoreductase [Streptomyces sp. SA3_actG]
gi|318076977|ref|ZP_07984309.1| oxidoreductase [Streptomyces sp. SA3_actF]
gi|333025134|ref|ZP_08453198.1| putative electron transfer oxidoreductase [Streptomyces sp. Tu6071]
gi|302430075|gb|EFL01891.1| electron transfer oxidoreductase [Streptomyces sp. SPB78]
gi|332744986|gb|EGJ75427.1| putative electron transfer oxidoreductase [Streptomyces sp. Tu6071]
Length = 427
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 157/372 (42%), Gaps = 39/372 (10%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCG-GAIPLCMVGEFDL 103
L+ + V V+G GPAG A A LAK G++ L+E+ K CG G P +
Sbjct: 5 LSEHSADVIVVGAGPAGSATAYHLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLIAM 64
Query: 104 PLDIIDR----KVTKMKMISPSN-VAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNG 157
+DI + + +++I+ N + +D + +Y G+VR R+ D L A+K G
Sbjct: 65 GIDISEEAGWLRNKGLRIIAGGNRLQLDWPELASFPDY-GLVRKRDDFDEQLARNAQKAG 123
Query: 158 ASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRT---LEVDAVIGADGANSRVA 214
A + N P G +GE++T V+ ADG ++R++
Sbjct: 124 ARLYERC--------NVGAPITDESGRITGVHAKLGEEKTPVTFHAPLVVAADGNSTRLS 175
Query: 215 KSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDFYGWVFPKCD 267
++ D +A + P Y E+ E++ G+D YGW+F D
Sbjct: 176 LAMGLHRREDRPMGVAVRTYFTSPRHDDDYLESWLELWDRRGPGEDRLLPGYGWIFGMGD 235
Query: 268 HVA-VGTGTVTHKGDIKKFQLATRNRAKDKILGGKI----------IRVEAHPIPEHPRP 316
+ VG G + K+ +A + + IR A P+ + +P
Sbjct: 236 GTSNVGLGVLNTSSSFKELDWREVLKAWCASMPEEWGYTPDNMTIPIRGAALPMAFNRQP 295
Query: 317 RRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLE 376
G + LVGDA G V +GEGI +A +SG + A+ +++ T + E L++Y +
Sbjct: 296 HYTKG-LLLVGDAGGLVNPFNGEGIAYAMESGAIAADVVVQAHGRRTAHLRELTLQRYPK 354
Query: 377 KWDKTYWPTYKV 388
TY Y +
Sbjct: 355 VLKDTYGGYYSL 366
>gi|312137433|ref|YP_004004770.1| 2,3-di-o-geranylgeranylglyceryl phosphate reductase [Methanothermus
fervidus DSM 2088]
gi|311225152|gb|ADP78008.1| 2,3-di-O-geranylgeranylglyceryl phosphate reductase [Methanothermus
fervidus DSM 2088]
Length = 393
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 158/357 (44%), Gaps = 69/357 (19%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER--KLDNCKPCGGAIPLCMVGEFDLPLD--II 108
V V+G GPAG AA A+NG E LI++ ++ K C I + ++ I
Sbjct: 6 VLVVGAGPAGSIAARNAAENGAEVILIDKMSEIGTPKRCAEGISAEGLKRVNIKPKKAWI 65
Query: 109 DRKVTKMKMISPSNVAVDI-GQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-INGLFM 166
++T ++++SP+N +V + +K E ++ R++ D YL A ++GA + + +
Sbjct: 66 TNEITGVRLVSPNNTSVWLTADKVKFPEAGYILERKIFDKYLAMEAARSGAKIKVKTIAR 125
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK------SINAG 220
+D + + V Y + EK ++ VI ADG SRVA+
Sbjct: 126 GID--KKNDDIIVHAYC--------MDEKIDIKTKIVIAADGPESRVARWFGLKTHTKVK 175
Query: 221 DYDYAIAFQE-RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTH 278
D A F+ V I D + E Y G +V+P Y W+FPK D VA VG G +
Sbjct: 176 DMISAAQFEMVNVDIDDSSCI------EFYFG-NVAPGGYAWIFPKSDDVANVGLGVLNT 228
Query: 279 KGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRP---------------RRLSGRV 323
K T+ A + +L V+ +P ++ +P ++ +
Sbjct: 229 K---------TKKSAYEHLLS----FVKENPATKNAQPVEFNVGGVPVAGMHKNLVADGL 275
Query: 324 ALVGDAAGYVTKCSGEGIYFAAK----SGRMCAEAIIEGSENGTRMIDEGDLRKYLE 376
+VGDAAG V +G G+ +G++ AEA I+ +N +M L+KY E
Sbjct: 276 MVVGDAAGQVNPLTGGGLVTGMVGGMLAGKVAAEA-IDKDDNSEKM-----LKKYEE 326
>gi|298675497|ref|YP_003727247.1| geranylgeranyl reductase [Methanohalobium evestigatum Z-7303]
gi|298288485|gb|ADI74451.1| geranylgeranyl reductase [Methanohalobium evestigatum Z-7303]
Length = 396
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 149/367 (40%), Gaps = 70/367 (19%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIP-------LC 96
+ ++ + V+G GPAG AA A+NG LI+RK D P CGG +P L
Sbjct: 2 IPEKSYDIVVVGAGPAGSTAANYAARNGKSVLLIDRKKDIGTPLQCGGFLPHYETLRELV 61
Query: 97 MVGEF-----DLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRE 151
E + P + I + + I+P + T + R D YL +
Sbjct: 62 PNAELPYTLEEYPSECIHTTTSCQRFIAPDGCSKQFDVTADA------IDRRRFDKYLAK 115
Query: 152 RAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTK---GGVGEKRTLEVDAVIGADG 208
A K+ V+ G + TE +G+ GV T + D +IGADG
Sbjct: 116 EAAKSDVQVMPGTTV----------------TEINGSTLELEGVFGSFTTDADVIIGADG 159
Query: 209 ANSRVAKSIN-AGDYD---YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFP 264
NS VAKS + +YD AF+ + D + EMY G D P Y W+
Sbjct: 160 PNSTVAKSKGLSREYDPMSVGTAFEYELSGVDVD----RDAVEMYFGKDYVPGGYAWIIS 215
Query: 265 K-CDHVAVGTG---TVTHKGD-----IKKFQ----LATRNRAKDKILGGKIIRVEAHPIP 311
+ D +G G T+ KG + KF +A+ K ++ V P
Sbjct: 216 QGGDTANIGVGIRETLFEKGMCARDYLNKFMYEHPIASEKLKKGSVVSVVSGIVPVGGAP 275
Query: 312 EHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDL 371
++ +S + GDAAG++ +G GI A +G++ E E S +G +DE
Sbjct: 276 KY----TVSDNTLIAGDAAGHIIATNGGGIPTAMVAGKVAGETASE-SIDGKCELDE--- 327
Query: 372 RKYLEKW 378
Y ++W
Sbjct: 328 --YEKRW 332
>gi|408420302|ref|YP_006761716.1| geranylgeranyl reductase [Desulfobacula toluolica Tol2]
gi|405107515|emb|CCK81012.1| geranylgeranyl reductase [Desulfobacula toluolica Tol2]
Length = 365
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 17/187 (9%)
Query: 198 LEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPD 257
L +IGADGANS V + ++ G + +Q++ I + + ++ M S +
Sbjct: 135 LRASYLIGADGANSIVRRFVSKGRF-----YQKQFAIEADVKIDRPDMYHMEFDFSKSLN 189
Query: 258 FYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHP-RP 316
Y W+FPK DHV +G +V ++ L + A +K+ ++ V+ +PI +
Sbjct: 190 GYYWIFPKDDHVNIGNYSVDSNSRLQIQHLF--DYADEKLHSRRLDAVKGYPICTGGFKY 247
Query: 317 RRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMID--------- 367
R S RV L GDAAG + GEGI+FA KSG+ A AI+E + D
Sbjct: 248 RPDSKRVLLAGDAAGLSERLLGEGIFFAVKSGQAAARAILESELHALSARDLYREKLKAI 307
Query: 368 EGDLRKY 374
+ DLR Y
Sbjct: 308 QADLRVY 314
>gi|442804875|ref|YP_007373024.1| protein CbrA [Clostridium stercorarium subsp. stercorarium DSM
8532]
gi|442740725|gb|AGC68414.1| protein CbrA [Clostridium stercorarium subsp. stercorarium DSM
8532]
Length = 354
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 142/325 (43%), Gaps = 44/325 (13%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKL--DNC--KPCGGAIPLCMVGEFDLPLDII 108
+A+IG GPAG A+ L K L +R + +NC K CGG +
Sbjct: 5 IAIIGAGPAGCTLAKLLDKKYKVILLDKRDILSENCNSKCCGGLLA-----------PDA 53
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLR---ERAEKNGASVINGLF 165
+ + +M M PS+V VD P + +VR D L +R N ++ +
Sbjct: 54 QKILGRMGMAIPSSVLVD------PQLF--LVRTLDFDNNLERYYQRFYFNMDRLVFEQW 105
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGV-------GEKRTLEVDAVIGADGANSRVAKSIN 218
+ +P++ + + + T GV G+ T +IGADG +S V K +
Sbjct: 106 LLSQVPKSVDLALGCTFKNCEYTGEGVKFSFTYQGKTFTEYAKVIIGADGGHSMVRKYVF 165
Query: 219 AGDY--DYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV 276
G + +A QE + D+ M +Y + D DFY W K + + +G+
Sbjct: 166 PGKKMPETYVAVQEWFEF-DKSMPWYN-----VIFDSTITDFYSWTITKGNVLIIGSALK 219
Query: 277 THKGDIKKFQL-ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR--VALVGDAAGYV 333
+ + +F++ + R + + G KI R A + ++G ALVG+AAG++
Sbjct: 220 MNNLALDRFRMFKMKLRDRGLVYGKKIFREGALILRPGDISSIITGNDYCALVGEAAGFI 279
Query: 334 TKCSGEGIYFAAKSGRMCAEAIIEG 358
+ S EGI +A KS A+A+ EG
Sbjct: 280 SPSSAEGISYALKSAYCLADALNEG 304
>gi|435851132|ref|YP_007312718.1| geranylgeranyl reductase family protein [Methanomethylovorans
hollandica DSM 15978]
gi|433661762|gb|AGB49188.1| geranylgeranyl reductase family protein [Methanomethylovorans
hollandica DSM 15978]
Length = 402
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 162/395 (41%), Gaps = 42/395 (10%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIP-LCMVGEFDLPLD 106
N + V+G GPAG A+T AK G+ LIE++ + P C I + + +
Sbjct: 4 NYDIIVVGAGPAGSITAKTAAKKGLSVLLIEKRQEIGDPVRCAEGISKIALKKHIEPDPR 63
Query: 107 IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVI----- 161
I + ++ SP +V + + + E ++ R++ D L + K GA V+
Sbjct: 64 WICADMKGSRIFSPDGTSVQMAEEIAGGEVGYVLERKIFDRALVYESVKAGAEVMVKTRA 123
Query: 162 NGLFMKMDLPRNFEQPYVLYYTEYDGTKG-GVGEKRTLEVDAVIGADGANSRVAK----- 215
GL + E YV G K +G++ + VIGADG S+V +
Sbjct: 124 TGLII--------ENGYVC------GIKAMHLGKEYKIRSKIVIGADGMESKVGRWAGID 169
Query: 216 -SINAGDYDYAIAF-QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VG 272
S+ D + + + V I E + YVG ++P Y W+FPK ++A VG
Sbjct: 170 TSLKPSDMETCVQYLMSGVNIDQE-------YCQFYVGKKIAPCGYLWLFPKGGNMANVG 222
Query: 273 TGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAG 331
G + + K+ K+K+ II ++ +P R ++ + LVGDAA
Sbjct: 223 IGILGSESGEKRAIDYLNEFVKEKLPDASIIEIDYGGVPVSGTVERTIANGLMLVGDAAR 282
Query: 332 YVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDV 391
+G GI A +G + E G I L++Y ++W T +
Sbjct: 283 QSDPVTGGGIINAMDAGEIAGEVACNAILAGDVSIKS--LQEYEDRWRATIGKAIDNGLI 340
Query: 392 LQKVFYR-SNPAREAFVEMCADEYVQKMTFDSYLY 425
++ +F + ++ + D KM+ LY
Sbjct: 341 VKDLFVKFTDEELNSLAYSLKDVNFNKMSLTDLLY 375
>gi|77164496|ref|YP_343021.1| geranylgeranyl reductase [Nitrosococcus oceani ATCC 19707]
gi|254433546|ref|ZP_05047054.1| FAD dependent oxidoreductase, putative [Nitrosococcus oceani AFC27]
gi|76882810|gb|ABA57491.1| Geranylgeranyl reductase [Nitrosococcus oceani ATCC 19707]
gi|207089879|gb|EDZ67150.1| FAD dependent oxidoreductase, putative [Nitrosococcus oceani AFC27]
Length = 384
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 136/304 (44%), Gaps = 37/304 (12%)
Query: 134 HEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVG 193
H+ R DA L A + GA ++ G+ V+ E DG +
Sbjct: 90 HQPFFFTSRIHFDACLAALAREAGAYLLEGI--------------VVTSLEADGKAVRLN 135
Query: 194 EKRTLEVDAVIGADGANSRVAKSI---NAGDYDYAIAFQERVKIPDEKMVYYENLAEMYV 250
+ L+ D V+GADG SR+A++I A + A+ + +++P E E+Y+
Sbjct: 136 NGKMLKADFVVGADGVRSRIAEAILLHTASKKNLALGLE--IEVPLELTTKTVVDPEIYL 193
Query: 251 GDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPI 310
G V+ YGW+FPK + VG G + K K T R L IR + + +
Sbjct: 194 G--VAKWGYGWIFPKKETQTVGIGGLLTKNPDLKSTFNTFLRQHYGSLPN--IRCKGYHL 249
Query: 311 PEHPRPRRLSGR--VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDE 368
P +R GR + LVGDAAG V +GEGI FA +SGR+ A+AI+ + G E
Sbjct: 250 P-FGSYKRNPGRANILLVGDAAGLVEPVTGEGIAFAMQSGRLAAKAIVAAAGAGQ---PE 305
Query: 369 GDLRKYLEKWDK--TYWPTYKVL------DVLQKVFYRSNPAREAFVEMCADEYVQKMTF 420
L+ YL ++ + + K++ D +Q++F P + V D ++ +
Sbjct: 306 SALKYYLREYQSIVSLFSQAKMMRYLVFPDPMQRLFVSLLPHSKGMVRKYLDLLAGEIDY 365
Query: 421 DSYL 424
Y+
Sbjct: 366 KDYM 369
>gi|21226820|ref|NP_632742.1| oxidoreductase [Methanosarcina mazei Go1]
gi|20905119|gb|AAM30414.1| oxidoreductase [Methanosarcina mazei Go1]
Length = 408
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 152/360 (42%), Gaps = 62/360 (17%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIP-----LCMVGEFDLPL 105
+ V+G GPAG AA AK G L+++K + P C G +P ++ E DLP
Sbjct: 21 IVVVGAGPAGSTAALYAAKKGASVLLLDKKREIGSPIQCAGFLPDASEVKALLPEADLPG 80
Query: 106 DIIDRKVTKMKMISPSNVAVDIGQTLKPHEYI---GMVRREVLDAYLRERAEKNGASVIN 162
+ + ++ P I E+ ++ R D YL E+A + GA
Sbjct: 81 AL--KNYPDSCVLQPIRTQRIIPPNCNAKEFAVKGAVLDRRRYDQYLAEQAAEAGAE--- 135
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGT---KGGVGEKRTLEVDAVIGADGANSRVAKS--- 216
L +K + T+ GT G+ K T+ A+IGADG NS VAKS
Sbjct: 136 -LMVKTRV------------TKIQGTTVETSGIFGKHTIRAKAIIGADGPNSLVAKSRGL 182
Query: 217 ---INAGDYDYAIAFQER-VKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKC-DHVAV 271
A + AI +Q R V I + + EMY G D P Y WVFP+ D V
Sbjct: 183 IMKPEARETSVAIEYQVRNVDIDPDAL-------EMYFGKDYVPGGYAWVFPEGKDRANV 235
Query: 272 GTGT--------VTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRV 323
G G V+ K + +F + A K+ I+ V A IP + P +
Sbjct: 236 GIGIRSCMAEKGVSAKEYLHRF-IKKHPVAGPKLKNAVIMNVIAGIIPVNGAPANTATAD 294
Query: 324 AL-VGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTY 382
+L VGDAAG++ +G GI A +G++ E E + + DL +Y +W +
Sbjct: 295 SLVVGDAAGHIIATNGGGIPPAMIAGKIAGETAAEFAAG------KCDLEEYDRRWRAQF 348
>gi|302559109|ref|ZP_07311451.1| monooxygenase, FAD-binding [Streptomyces griseoflavus Tu4000]
gi|302476727|gb|EFL39820.1| monooxygenase, FAD-binding [Streptomyces griseoflavus Tu4000]
Length = 427
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 156/369 (42%), Gaps = 45/369 (12%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVGEFDL 103
L+ V V+G GPAG A LA++G++ L+E+ + K CG G P + +
Sbjct: 5 LSENTADVIVVGAGPAGSTTAYHLARSGLDVLLLEKTEFPREKVCGDGLTPRAVKQLVSM 64
Query: 104 PLDIIDR----KVTKMKMISPS-NVAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNG 157
+DI + + +++I + +D +Y G+VR R+ D L +A+K G
Sbjct: 65 GIDISEEAGWLRNKGLRIIGGGVRLQLDWPDLASFPDY-GLVRKRDDFDEQLARQAQKAG 123
Query: 158 ASVINGLFMKMDLPRNFEQPYVLYYT-EYDGTKGGVGEKR---TLEVDAVIGADGANSRV 213
A + N P V T G K +GE + T V+ ADG ++R+
Sbjct: 124 ARLYERC--------NVSGPIVDDRTGRITGVKAKLGEDKREVTFHAPLVVAADGNSTRL 175
Query: 214 AKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDFYGWVFPKC 266
+ ++ D +A + P Y E+ E++ D + P YGW+F
Sbjct: 176 SLAMGLHRREDRPMGVAVRTYFTSPRHDDDYLESWLELWDRRGAQDRLLPG-YGWIFGMG 234
Query: 267 DHVA-VGTGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIRVEAHPIPEH 313
D + VG G + K+ +A D + G IR A P+ +
Sbjct: 235 DGTSNVGLGVLNTSDAFKELDWREILKAWCASMPEDWGYTPDNMTG--PIRGAALPMAFN 292
Query: 314 PRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRK 373
+P G + LVGDA G V +GEGI +A +SG++ AE I++ T E LR+
Sbjct: 293 RQPHYTRG-LLLVGDAGGLVNPFNGEGIAYAMESGQLAAEVIVQAHARATPAQREIALRR 351
Query: 374 YLEKWDKTY 382
Y TY
Sbjct: 352 YPRVLKDTY 360
>gi|379056763|ref|ZP_09847289.1| geranylgeranyl reductase [Serinicoccus profundi MCCC 1A05965]
Length = 431
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 155/362 (42%), Gaps = 55/362 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEF---DLPLDII 108
V V+G GP G + A LA +G++ L+E+ K CG + V E +P+D
Sbjct: 10 VIVVGAGPGGASTAAYLASHGLDVLLLEKSSFPRDKICGDGLTPRAVRELISLGVPIDEA 69
Query: 109 D--RKVTKMKMISPS-NVAVDI--GQTLKPHEYIGMVR-REVLDAYLRERAEKNGASVIN 162
D + ++++ + +D +T P G+VR R LD L A GA ++
Sbjct: 70 DGWHRTRGLRILGGGMRLELDWPGNETFPP---FGLVRTRHDLDEILARHAVTRGARLLE 126
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGV--------GEKRTLEVDAVIGADGANSRVA 214
G+ N ++P + G + V GE+R V+ ADG +SR++
Sbjct: 127 GI--------NVQEPVLDSRGHICGVRAKVMGEDGRATGERREFRSRVVVAADGNSSRLS 178
Query: 215 KSINA---GDYDYAIAFQERVKIPDEKMVYYENLAEMYVGD-----DVSPDFYGWVFPKC 266
+++ D +A + + P Y E+ E++ D +V YGW+FP
Sbjct: 179 LAMDRPKRDDRPMGVAVRAYFETPRHDDPYLESWLELWTKDQNGQNEVLMPGYGWIFPVG 238
Query: 267 D---HVAVGT-------GTVTHKGDIKKFQLATRNRAKDKILGGKI----IRVEAHPIPE 312
D +V +G GT ++ D+ K +AT +D + IR A P+
Sbjct: 239 DGTANVGLGILDTAEAFGTFDYR-DVMKRWIATM--PQDWTFSEETQQGPIRGAALPMCF 295
Query: 313 HPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLR 372
+ +P G + LVGDA G V +GEGI A ++GR AE I T E LR
Sbjct: 296 NRQPLYDRG-LLLVGDAGGMVNPFNGEGIAEAMEAGRHAAEVIASALARATPGETEAVLR 354
Query: 373 KY 374
Y
Sbjct: 355 SY 356
>gi|170290758|ref|YP_001737574.1| geranylgeranyl reductase [Candidatus Korarchaeum cryptofilum OPF8]
gi|170174838|gb|ACB07891.1| geranylgeranyl reductase [Candidatus Korarchaeum cryptofilum OPF8]
Length = 368
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 146/347 (42%), Gaps = 76/347 (21%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLDIIDRKVT 113
VIG GP+G A LAK G +T +++ K K CGG + ++L ++
Sbjct: 6 VIGAGPSGSVTAYLLAKKGYKTLILDMKDFPRYKSCGGGVTWRA---YNLLREL------ 56
Query: 114 KMKMISPSN-----VAVDIGQTLK---PHEY-IGMVRREVLDAYLRERAEKNGASV---- 160
+K+ SP V G+ +K E+ + + R LD L + A GA
Sbjct: 57 GIKLRSPEAYHKEVVIRGFGEEIKVRSDEEFAVATLDRRKLDKELLDEAIAQGAEFRKEK 116
Query: 161 INGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAG 220
++G+ K D + Y VIGADGA S A I++G
Sbjct: 117 VSGVISKEDRVEVIGSGFSSRY--------------------VIGADGAYSITA--ISSG 154
Query: 221 ------DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTG 274
+ D A + R + DE D SP YGW+FP+ + G G
Sbjct: 155 IRNCWRNDDIIFAIEGRAPLYDELTFIV----------DASPSGYGWIFPRGEDSNAGVG 204
Query: 275 TVTHKGD--IKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGY 332
++ K IK F+ ++ R K + +G II H + GRV LVGDAAG
Sbjct: 205 GISSKSREVIKAFEEFSK-RYKVEKVGNWIIPTGGHD------KQIAKGRVLLVGDAAGL 257
Query: 333 VTKCSGEGIYFAAKSGRMCAEAI------IEGSENGTRMIDEGDLRK 373
+GEG+Y+A KS C++++ + SEN +++E L++
Sbjct: 258 ADPLTGEGLYYAFKSALECSKSLESEDPALSYSENMGNVMEELRLKR 304
>gi|428218749|ref|YP_007103214.1| geranylgeranyl reductase [Pseudanabaena sp. PCC 7367]
gi|427990531|gb|AFY70786.1| geranylgeranyl reductase [Pseudanabaena sp. PCC 7367]
Length = 377
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 149/354 (42%), Gaps = 41/354 (11%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLDIIDRKVT 113
V+G GP+GG+AA LAK G ++E++ L KPCGG + + FD D
Sbjct: 6 VVGSGPSGGSAAYHLAKRGRSVLVLEKESLPRYKPCGGGVSPAVQQWFD--FDFSPAVSL 63
Query: 114 KMKMISPSNVAVDIGQT-LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPR 172
K+ I + D + L E I MVRR+V D YL ++A+K GA + +
Sbjct: 64 KLDQICYTWQMGDRQEVELATTEPIWMVRRDVFDHYLIQQAQKQGAELRDNT-------- 115
Query: 173 NFEQPYVLYYTEYDGTKGGVGE-KRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQER 231
+ E+ G + V L +I ADG+ +AK + + +
Sbjct: 116 ------AVSGIEWLGDRWQVNTANEPLIAKYLIAADGSRGSMAKWLGFKERKRRMGAALE 169
Query: 232 VKIP----DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT--HKGDIKKF 285
V+ P M++++ + + Y W FPK D ++G+GT K ++K
Sbjct: 170 VEAPAPASPTTMIHFDF--------GMVNNGYIWNFPKADGYSIGSGTFIGGEKQNLK-- 219
Query: 286 QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVA-LVGDAAGYVTKCSGEGIYFA 344
++A + + K I+ HPI + L + A L G+AA V + EGI +
Sbjct: 220 EVAAKYAQSFGVESFKGIKQYGHPISLWNGDQVLHTQNAVLTGEAACVVDPFTAEGIRPS 279
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398
+G + AE+I T + E Y E+ + + L +FYR
Sbjct: 280 LFTGMLAAESIDSALAGNTNALAE-----YTERVSEEWGADMVWAQRLSNIFYR 328
>gi|219670245|ref|YP_002460680.1| oxidoreductase [Desulfitobacterium hafniense DCB-2]
gi|219540505|gb|ACL22244.1| FAD dependent oxidoreductase [Desulfitobacterium hafniense DCB-2]
Length = 356
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 148/329 (44%), Gaps = 49/329 (14%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP-------CGGAIP---LCMVGEFD 102
V +IG GPAG + A + + +R L N P CGG + M+ +
Sbjct: 4 VLIIGAGPAGSSLARLIGDKYKVLLIDKRDLANENPHNLAGKCCGGLLAPDAQKMIAKLG 63
Query: 103 L--PLDI-IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGAS 159
L P DI ++ ++ ++ I +N + Q Y+ M RE D +L K
Sbjct: 64 LGIPKDILVNPQLFAVRTIDLTNNLERLYQRF----YLNM-DREKFDRWLVSILPKKVDK 118
Query: 160 VINGLFMK-MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN 218
N +F +++P +E Y+ G++ + + +IGADGA S++ + +N
Sbjct: 119 KFNAVFKDFVEIPGGYEVKYI-----------HNGQEISAKTRVIIGADGAFSKLRRFLN 167
Query: 219 A---GDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGT 275
G Y IA QE + P + Y+ + D+ DFY W+ PK +++ +G+
Sbjct: 168 QDINGPEKY-IAIQEWYECP-HHVPYFTA-----IFDEEISDFYSWIIPKENYLLLGSAL 220
Query: 276 VTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS----GR--VALVGDA 329
+ +K++L + IR E + RP+++S GR +ALVG+A
Sbjct: 221 KPKEKAREKYELLKTKLTQRGFNFDNKIRTEGAYLY---RPKKVSQFYAGRDSIALVGEA 277
Query: 330 AGYVTKCSGEGIYFAAKSGRMCAEAIIEG 358
AG ++ S EGI +A KS A+++ EG
Sbjct: 278 AGGISPSSAEGISYALKSSAYLAQSLEEG 306
>gi|294674317|ref|YP_003574933.1| hypothetical protein PRU_1638 [Prevotella ruminicola 23]
gi|294472862|gb|ADE82251.1| conserved hypothetical protein [Prevotella ruminicola 23]
Length = 350
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 131/322 (40%), Gaps = 42/322 (13%)
Query: 47 TNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPL 105
R++ V +IG GPAG L + GVE ++++ K CGG + + D+ L
Sbjct: 3 NKRHIDVLIIGAGPAGSVCGSLLKQAGVECLIVDQATFPRDKVCGGGLTVKAWRLLDMLL 62
Query: 106 DIID---RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVIN 162
I R +T+M+ N AV Q P I M RR+ D L + +G ++
Sbjct: 63 PGIQYNYRPITRMR-CQFENDAVCEFQAEYP---IRMTRRKDFDYSLLQYYLDHGGELMK 118
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDY 222
G F + D + + L E + ++ ADG+NS++ + I+ GD
Sbjct: 119 GSFARFDQQADGQVLVTLKSGE------------QISCRYLVAADGSNSQIRQQIH-GDS 165
Query: 223 DYAIAFQERV---KIPDEKMVYYENLAE---MYVGDDVSPDFYGWVFPKCDHVAVGTGTV 276
F E+ K D+ V++ N Y V D YG+ V
Sbjct: 166 KLRAMFLEQFDEGKESDDVFVHFSNNYRPGVFYKFSSVGRDMYGYA-----SVETNDDMP 220
Query: 277 THKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKC 336
HK K+ L D+I G I + +P + V L+GDA G+ K
Sbjct: 221 RHKAGFKQ-ALTKFGVPVDRICGAYI---QLDTVPH------TADNVILIGDAGGFANKL 270
Query: 337 SGEGIYFAAKSGRMCAEAIIEG 358
+GEG+Y A K+ AI+EG
Sbjct: 271 TGEGLYDAFKTAANAKRAIVEG 292
>gi|340757310|ref|ZP_08693912.1| FAD dependent oxidoreductase [Fusobacterium varium ATCC 27725]
gi|251834574|gb|EES63137.1| FAD dependent oxidoreductase [Fusobacterium varium ATCC 27725]
Length = 355
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 136/315 (43%), Gaps = 31/315 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDN-----CKPCGGAIPLCMVGEFDLPLDI 107
+ VIGGGPAG ++ + L R ++ K CGG + E L
Sbjct: 5 IVVIGGGPAGSVFSKFINSKYKVLLLDRRDYEDENNKIIKCCGG----LLAHEAQAALSG 60
Query: 108 IDRKVTKMKMISPS--NVAV-DIGQTLKPHEYIGMVR--REVLDAYLRERAEKNGASVIN 162
+ ++K ++SP NV V D LK Y + RE D YL + + +
Sbjct: 61 LGYSLSKDILVSPQVFNVQVIDYDNNLKKKYYKNYLNFDREKFDNYLLSQKASHVELIKG 120
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDY 222
LF+ D + Y + Y + G+ K+ ++ ++ A+GANS + K+++
Sbjct: 121 ALFI--DYSEDENGIYTVIY------RIGMDIKK-VKTKMIVSAEGANSLIRKNLDNKSK 171
Query: 223 DYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDI 282
+ IA Q K+ + Y+ M + D ++Y W+ PK + + +GT KG
Sbjct: 172 NDYIAIQRVYKMKKD-FSYH-----MAIFDKNINNYYSWLVPKGNELILGTILKKGKGSW 225
Query: 283 KKFQLATRNRAKDKILGGKIIRVEAHPI--PEHPRPRRLSGRVALVGDAAGYVTKCSGEG 340
KF + I IIR E I P+ R+AL+G+AAG ++ S EG
Sbjct: 226 DKFHQLEERVKSEGIDINDIIRDEGTFIRVPKWNEYFMAKDRIALIGEAAGLISASSSEG 285
Query: 341 IYFAAKSGRMCAEAI 355
I +A SG A++I
Sbjct: 286 ISYALISGYYLADSI 300
>gi|443291581|ref|ZP_21030675.1| Geranylgeranyl reductase [Micromonospora lupini str. Lupac 08]
gi|385885496|emb|CCH18782.1| Geranylgeranyl reductase [Micromonospora lupini str. Lupac 08]
Length = 384
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 159/403 (39%), Gaps = 72/403 (17%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAI---PLCMV-GEFDLPL-D 106
+ V+G GPAG +AA A+ GV T ++ER K CGG + L V G ++P D
Sbjct: 6 LVVVGAGPAGLSAAHAAARAGVRTLVVERATHPRYKTCGGGLIGTSLAAVRGRIEVPAHD 65
Query: 107 IIDR----KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVIN 162
+DR + + + + V + MVRRE D LR A GA +
Sbjct: 66 RVDRVTFTRDGRREFTRRNGSPV-----------VTMVRREEFDDRLRAAAVAAGAQMRE 114
Query: 163 GLFMKMDLPRNFEQ-PYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGD 221
+ + R EQ P + DGT T+ VIGADG++ A+ +
Sbjct: 115 QVAV-----RAIEQDPEGVRLRLADGT--------TIAARTVIGADGSSGVTARHVGVRY 161
Query: 222 YDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD 281
+ + V +P + + + + P Y WVFPK D + VG G+
Sbjct: 162 RQVDLGLELEVPVPPAEQERWRG--RLLLDWGAMPGSYAWVFPKGDRLTVGVIAGRGAGE 219
Query: 282 ---------IKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGY 332
+ + L D G + R A P +GRV +VGDAAG
Sbjct: 220 GTRAYLREFVDRLGLTGLPAEHDS---GHLTRCRAEDSPLR------NGRVLVVGDAAGL 270
Query: 333 VTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVL 392
+ S EGI FA +SG + A+ +G G R E+ +++LD+
Sbjct: 271 LEPWSREGISFALRSGELAGAAVADGDLAGYE-------RAVAERLTPEMRAGFRLLDLF 323
Query: 393 QK---VFY---RSNPAREAFVEMCADEYVQKMTFDSYLYKRVV 429
VF+ + P FV C + +FD L +R +
Sbjct: 324 TSRPAVFHALLATPPGWRMFVRFCQG----RASFDDMLRRRPI 362
>gi|261416508|ref|YP_003250191.1| geranylgeranyl reductase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|385791362|ref|YP_005822485.1| geranylgeranyl reductase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372964|gb|ACX75709.1| geranylgeranyl reductase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302326495|gb|ADL25696.1| geranylgeranyl reductase family protein [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 395
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 129/329 (39%), Gaps = 23/329 (6%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIP----LCMVG 99
N V VIG GP G AA L++ G + L+E++ P CG A L G
Sbjct: 2 FCNNEYDVVVIGAGPGGSVAARNLSRAGHKVLLLEKREKIGYPVRCGEASTKLSDLQTYG 61
Query: 100 EFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGAS 159
D D I+ + + + P+ V +D+ Q M+ RE D +L A +G
Sbjct: 62 PIDE--DCIETIINGLYIYGPNGVNIDLAQKGTGI----MLNREKFDPWLAHLAANDGVE 115
Query: 160 VINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDA--VIGADGANSRVAKSI 217
V+ + + + E L + G GE T EV A VI ADG SR+ + +
Sbjct: 116 VVTR--ARAEFVGDVESGTRLVRVKLGE---GAGET-TEEVRAKMVIAADGVESRIGRQV 169
Query: 218 NAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKC--DHVAVGTGT 275
V I + ++ + + G D D Y W FPK + G G
Sbjct: 170 GLDCLQKPAFTCTGVDIQVQGILTKPDYLTFWQGHDFINDGYIWSFPKVKSNVTNFGAGF 229
Query: 276 VTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVT 334
+ T G +I V IP + + R ALVGDAA +
Sbjct: 230 LISNNHGSNVLDITMEWLYKLFPGAQINHVVGGVIPVSSVLKDYTLDRFALVGDAAHHTN 289
Query: 335 KCSGEGIYFAAKSGRMCAEAIIEGSENGT 363
+G GI A ++GR CA+ + EG E G
Sbjct: 290 PLTGGGIAAAMRAGRFCAQTVHEGFECGN 318
>gi|294630794|ref|ZP_06709354.1| monooxygenase, FAD-binding [Streptomyces sp. e14]
gi|292834127|gb|EFF92476.1| monooxygenase, FAD-binding [Streptomyces sp. e14]
Length = 431
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 159/372 (42%), Gaps = 45/372 (12%)
Query: 43 SPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVGE 100
S L V V+G GPAG A LAK G++ L+E+ + K CG G P +
Sbjct: 6 SDSLAGNTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTEFPREKVCGDGLTPRAVKQL 65
Query: 101 FDLPLDIIDR----KVTKMKMISPS-NVAVDIGQTLKPHEYIGMVR-REVLDAYLRERAE 154
+ +DI + + +++I + +D +Y G+VR R+ D L +A+
Sbjct: 66 VAMGIDISEEAGWLRNKGLRIIGGGVRLQLDWPDLASFPDY-GLVRKRDDFDEQLARQAQ 124
Query: 155 KNGASVINGLFMKMDLPRNFEQPYVLYYT-EYDGTKGGVGEKR---TLEVDAVIGADGAN 210
K GA L+ + N +P V T G K +GE++ T V+ ADG +
Sbjct: 125 KAGAR----LYERC----NVGEPIVDDRTGRITGVKAKLGEEKREVTFHAPLVVAADGNS 176
Query: 211 SRVAKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDFYGWVF 263
+R++ ++ D +A + P Y E+ E++ D + P YGW+F
Sbjct: 177 TRLSLAMGLHRREDRPMGVAVRTYFTSPRHDDDYLESWLELWDRRGAQDRLLPG-YGWIF 235
Query: 264 PKCDHVA-VGTGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIRVEAHPI 310
D + VG G + K+ +A D + G IR A P+
Sbjct: 236 GMGDGTSNVGLGVLNTSAAFKELDWREILKAWCASMPEDWGYTPDNMTG--PIRGAALPM 293
Query: 311 PEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGD 370
+ +P G + LVGDA G V +GEGI +A +SG++ AE I++ T E
Sbjct: 294 AFNRQPHYTRG-LLLVGDAGGLVNPFNGEGIAYAMESGQIAAEVIVQAHSRATPAQRELA 352
Query: 371 LRKYLEKWDKTY 382
L++Y TY
Sbjct: 353 LQRYPRVLKDTY 364
>gi|302543448|ref|ZP_07295790.1| putative monooxygenase, FAD-binding [Streptomyces hygroscopicus
ATCC 53653]
gi|302461066|gb|EFL24159.1| putative monooxygenase, FAD-binding [Streptomyces himastatinicus
ATCC 53653]
Length = 440
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 171/419 (40%), Gaps = 59/419 (14%)
Query: 38 SAAKTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCG-GAIPL 95
+ S ++ R+ V V+G GPAG A LAK+G++ L+E+ K CG G P
Sbjct: 10 ATGSASSGISERSADVIVVGAGPAGSTTAYHLAKSGLDVLLLEKTAFPREKVCGDGLTPR 69
Query: 96 CMVGEFDLPLDIID-----RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVR-REVLDAYL 149
+ +DI + R M + +D L + G+VR R+ D L
Sbjct: 70 ATKQLVAMGIDISEEAGWLRNRGLRIMGGGLRLELDW-PDLAAYPNYGLVRKRDDFDDQL 128
Query: 150 RERAEKNGASVINGLFMKMDLPRNFEQPYVLYYT-EYDGTKGGVGEKRT---LEVDAVIG 205
+A+K GA + N P V T G + +GE++T V+
Sbjct: 129 ARQAQKAGARLYERC--------NVGAPIVDDRTGRITGVEAKLGEEKTPVTFHAPLVVA 180
Query: 206 ADGANSRVAKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDF 258
ADG ++R++ ++ D +A + P Y E+ E++ D + P
Sbjct: 181 ADGNSTRLSLAMGLHRREDRPMGVAVRTYFTSPRHDDDYLESWLELWDRRGAEDRLLPG- 239
Query: 259 YGWVFPKCDHVA-VGTGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIRV 305
YGW+F D + VG G + K+ +A D + G IR
Sbjct: 240 YGWIFGMGDGTSNVGLGVLNTSNSFKELDWREILKAWCASMPEEWGYTPDNMTG--PIRG 297
Query: 306 EAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRM 365
A P+ + +P G + LVGDA G V +GEGI +A +SG++ A+ I++ T
Sbjct: 298 AALPMAFNRQPHYTRG-LLLVGDAGGMVNPFNGEGIAYAMESGQIAADVIVQAHSRATPA 356
Query: 366 IDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYL 424
E LR+Y + VL+ V+ AFV++ + V K+ + L
Sbjct: 357 QREMALRRYPQ--------------VLKDVYGGYYTLGRAFVKLIGNPKVMKLATERGL 401
>gi|332158342|ref|YP_004423621.1| hypothetical protein PNA2_0702 [Pyrococcus sp. NA2]
gi|331033805|gb|AEC51617.1| hypothetical protein PNA2_0702 [Pyrococcus sp. NA2]
Length = 393
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 162/374 (43%), Gaps = 39/374 (10%)
Query: 66 AETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLD--IIDRKVTKMKMISPS 121
A +AK G L+++K + K C + + EFD+P D I+R++ K+ SPS
Sbjct: 18 ARNVAKAGFSVLLVDKKPAIGAPKQCAEGLTMNAFKEFDIPYDKRFINREIYGAKIYSPS 77
Query: 122 NVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVL 180
+ L+ E G++ R+V D L A K GA V + + V+
Sbjct: 78 GYTAE----LRYKEVSGVILERKVFDKMLAYYAAKAGADV-------------WARTEVV 120
Query: 181 YYTEYDGTKGGV-----GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIP 235
DG GV GE +E ++ ADG S +A+ AG YA +
Sbjct: 121 DVIRKDGRIVGVKAKHEGEPVEIEAKVIVAADGVESTIARK--AGINTYAPPHEFDSGYE 178
Query: 236 DEKMV--YYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVGTGTVTHKGDIKKFQLATRNR 292
E ++ + +L ++ G ++P Y WVFPK D VG G + K+ L +
Sbjct: 179 YEMLIEGFDPDLIHLWFGTKIAPRGYIWVFPKDEDRANVGIGINSDNELTAKYYL-DKWL 237
Query: 293 AKDKILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVTKCSGEGIYFAAKSGRMC 351
++ I KI+ + IP + L V +VGDAA V G G+ A K+ +
Sbjct: 238 KENNIPMRKILEINVGLIPVGGFVKELVKENVLVVGDAARQVNPVHGGGMAEAMKAATIA 297
Query: 352 AEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR-SNPAREAFVEMC 410
++ I++ E L+ Y E+W K P + L L++ + ++ + FV++
Sbjct: 298 SKWIVKALEEENLE----LLKNYKEEWWKKEGPRMEKLLRLRRAMEKLTDEDLDVFVQLV 353
Query: 411 ADEYVQKMTFDSYL 424
+ ++K+ +YL
Sbjct: 354 SGTDLEKLASGNYL 367
>gi|18976826|ref|NP_578183.1| bacteriochlorophyll synthase, 43 kDa subunit [Pyrococcus furiosus
DSM 3638]
gi|397650959|ref|YP_006491540.1| bacteriochlorophyll synthase, 43 kDa subunit [Pyrococcus furiosus
COM1]
gi|18892425|gb|AAL80578.1| bacteriochlorophyll synthase, 43 kDa subunit [Pyrococcus furiosus
DSM 3638]
gi|393188550|gb|AFN03248.1| bacteriochlorophyll synthase, 43 kDa subunit [Pyrococcus furiosus
COM1]
Length = 370
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 130/307 (42%), Gaps = 34/307 (11%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPLCMVGEFDLPLDIIDRK 111
V +IGGGP G A LA + ++ERK K C G I P +
Sbjct: 5 VLIIGGGPVGNYLASLLAGK-LSVAVVERKGSFGGKACTGIIGADNYEALGFPEKAVLNT 63
Query: 112 VTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLP 171
IS +T P Y +V R++L+ L ++A K GA ++ +
Sbjct: 64 FNGAYFISKKKYFHISRKT--PQAY--LVDRKILERELAKKAMKKGAE----YYLATNFL 115
Query: 172 RNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVI--GADGANSRVAKSINAGDYDYAIAFQ 229
+ VL + DG +E+ A I GADG NS VAK I A +
Sbjct: 116 KFKNGKAVLQH--LDGR---------MEIGAKIYVGADGVNSTVAKEIGAKTEGEILKGW 164
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLAT 289
E + + + N E++V D++PDF+ WV P + VA GT + KF L
Sbjct: 165 EVEVLGN----FRRNSVEVWVNKDINPDFFFWVAPINEEVA-RVGTFGSVDSLAKF-LQM 218
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R K+ GG+I+ + + R + G VALVGDAA + + GI F A R
Sbjct: 219 R-----KLKGGQILEFKTGAVILGMRKPWVKGNVALVGDAALQIKPTTAGGIVFGALCAR 273
Query: 350 MCAEAII 356
A+AI+
Sbjct: 274 ALAKAIL 280
>gi|452203566|ref|YP_007483699.1| FAD/NAD(P)-binding oxidoreductase [Dehalococcoides mccartyi DCMB5]
gi|452110625|gb|AGG06357.1| FAD/NAD(P)-binding oxidoreductase [Dehalococcoides mccartyi DCMB5]
Length = 379
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 139/336 (41%), Gaps = 35/336 (10%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDI 107
N V VIG GP G A+ LA+ G E L+E+K + K C G I ++
Sbjct: 2 NTDVLVIGAGPVGLHTAKCLAECGYEVRLLEKKPEAAKQVCCTGIISTECASKYGFDGKY 61
Query: 108 IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK 167
I ++ + SP GQ L +++R+ A + +RA + +
Sbjct: 62 IQNYFSEASVYSPG------GQKL-------LLKRDTPQAIMLDRASFLAKLLQQAINCG 108
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDY-DYAI 226
+ F+ + Y +G + E ++ AV+ A G N+ ++++ G+ ++A
Sbjct: 109 VRTSFGFQANSIEYIE--NGLRITTKEGQSFTAKAVVLAAGYNTALSRATGLGEINNFAY 166
Query: 227 AFQERV--KIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKK 284
Q V IP NL+ ++ G +S ++GW+ P D A G +T K +
Sbjct: 167 GLQAEVDTSIPS-------NLS-LFTGKAISQGYFGWLSPINDCTA-KMGLLTRKNPFEC 217
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
+ + ++ K I P+P RV VGD AG + +G GIYF
Sbjct: 218 WSALHNTLYEQGLITAKHINYVCRPVPIGNLSASFGDRVLAVGDFAGQLKPTTGGGIYF- 276
Query: 345 AKSGRMCAEAIIEGSENG--TRMIDEGDLRKYLEKW 378
G +CA+ + + T + + +L +Y + W
Sbjct: 277 ---GLLCADLAVSCLDKNIKTNKLSKANLAEYEKNW 309
>gi|45357951|ref|NP_987508.1| geranylgeranyl reductase [Methanococcus maripaludis S2]
gi|74555631|sp|Q6M083.1|GGR_METMP RecName: Full=Digeranylgeranylglycerophospholipid reductase;
Short=DGGGPL reductase; AltName:
Full=2,3-di-O-geranylgeranylglyceryl phosphate
reductase; AltName: Full=Geranylgeranyl reductase;
Short=GGR
gi|44920708|emb|CAF29944.1| geranylgeranyl bacterial chlorophyll reductase related
[Methanococcus maripaludis S2]
Length = 390
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 147/322 (45%), Gaps = 33/322 (10%)
Query: 45 KLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFD 102
K N + V V+G GPAG A+ +KNG +T LIE+ + P C A+P + +F
Sbjct: 2 KALNDSYDVVVVGAGPAGSMASYNASKNGAKTLLIEKSQEIGTPVRCAEAVP--RLEDFG 59
Query: 103 LPLD--IIDRKVTKMKMISPSN--VAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGA 158
+ D + + +I+P+ + V G+T Y+ V R+V D +L R+ + G
Sbjct: 60 INPDPSFVKSYIRGGYLIAPNGKKIVVKGGKT---DGYV--VERKVFDKFLAIRSGQAGT 114
Query: 159 SV-INGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK-- 215
+ + K++ + +V Y +G++ ++ VI ADG S +A+
Sbjct: 115 QIAVKSRVTKIEKTDDGYNVFVNY----------LGDEYIVKSKIVIAADGVESNIAEYA 164
Query: 216 SINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGT 275
+ + I ++ + K++ E + E Y G D+ P Y W+FPK D V VG G
Sbjct: 165 GLKSKKNPKEICSCAEYEMTNVKLLNNE-MMEFYFG-DICPKGYIWLFPKGDTVNVGIGV 222
Query: 276 VTHKGDIKKF--QLATRNRAKDKILGGKII--RVEAHPIPEHPRPRRLSGRVALVGDAAG 331
+ K + + T + ++ + +V P+ P + ++ + +VGDAAG
Sbjct: 223 IDSKKRAIDYLDEFLTHPLVEGRLDNAVPVEFKVGGDPVG-GPIKKTVADNIMVVGDAAG 281
Query: 332 YVTKCSGEGIYFAAKSGRMCAE 353
+V+ +G GI + G M +
Sbjct: 282 HVSPLTGGGIGLSMDCGLMAGD 303
>gi|297192796|ref|ZP_06910194.1| electron transfer oxidoreductase [Streptomyces pristinaespiralis
ATCC 25486]
gi|197721015|gb|EDY64923.1| electron transfer oxidoreductase [Streptomyces pristinaespiralis
ATCC 25486]
Length = 428
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 155/368 (42%), Gaps = 42/368 (11%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCG-GAIPLCMVGEFDL 103
LT + V V+G GPAG A LAK G++ L+E+ K CG G P +
Sbjct: 5 LTEHSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVSM 64
Query: 104 PLDIIDR----KVTKMKMISPS-NVAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNG 157
+DI + + +++I + +D + +Y G+VR R+ D L +A+K G
Sbjct: 65 GIDISEEAGWLRNKGLRIIGGGVRLQLDWPELASYPDY-GLVRKRDDFDEQLARQAQKAG 123
Query: 158 ASVINGLFMKMDLPRNFEQPYVLYYT-EYDGTKGGVGEKRT---LEVDAVIGADGANSRV 213
A + N P + T G +GE +T V+ ADG +SR+
Sbjct: 124 ARLYERC--------NVGAPVIDDRTGRITGVHAKLGEDKTPVTFHAPLVVAADGNSSRI 175
Query: 214 AKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDFYGWVFPKC 266
+ ++ D +A + P Y E+ E++ G+D YGW+F
Sbjct: 176 SLAMGLHRREDRPMGVAVRTYFTSPRHDDDYLESWLELWDRRGPGEDRLLPGYGWIFGMG 235
Query: 267 DHVA-VGTGTVTHKGDIKKFQLATRNRA-----------KDKILGGKIIRVEAHPIPEHP 314
D + VG G + K+ +A D+ + G I R A P+ +
Sbjct: 236 DGTSNVGLGVLNTSASFKELDWREVLKAWCASMPEDWGYTDENMTGPI-RGAALPMAFNR 294
Query: 315 RPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKY 374
+P G + LVGDA G V +GEGI +A +SG++ A+ I++ T E L +Y
Sbjct: 295 QPHYTKG-LLLVGDAGGLVNPFNGEGIAYAMESGQIAADVIVQAHARQTPAQRELALHRY 353
Query: 375 LEKWDKTY 382
+ TY
Sbjct: 354 PKVLKDTY 361
>gi|298489664|ref|YP_003719841.1| geranylgeranyl reductase ['Nostoc azollae' 0708]
gi|298231582|gb|ADI62718.1| geranylgeranyl reductase ['Nostoc azollae' 0708]
Length = 373
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 135/315 (42%), Gaps = 40/315 (12%)
Query: 69 LAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLD-IIDRKVTKMKMISPSNVAVD 126
LAK G ++E++ L KPCGG + + FD I KV ++ V+
Sbjct: 20 LAKRGRSVLVLEKESLPRYKPCGGGVSPAITQWFDFDFSPAISVKVDSLRFTWKLEDPVE 79
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----INGLFMKMDLPRNFEQPYVLY 181
+K E + MVRR V D +L ++A+K GA + + G+ + D
Sbjct: 80 AKIGIK--EPVWMVRRHVFDHFLVQQAQKQGAELKDYTEVTGIEFQGD------------ 125
Query: 182 YTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVY 241
Y + + G V +I ADGA +AK + D +A ++P E V
Sbjct: 126 YWQVNTANGSVTGHY------LIAADGAKGPMAKWLGFKDRKRRLAGALEAEVPAE--VI 177
Query: 242 YENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGK 301
N+A G + + Y W FPK D ++G GT G+ + F+ + AK L K
Sbjct: 178 NNNMAYFEFG--LLKNGYIWNFPKADGYSIGVGTFI-GGEPQDFKKILDDYAKSFNLDVK 234
Query: 302 IIRVEAHPIPEHPRPRRLSGRVA-LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI----- 355
+ HPI ++L + A L G+AA V + EGI + SG + A+ I
Sbjct: 235 TTKQYGHPICLWNGNQKLHTQNAVLAGEAACVVDPFTAEGIRPSIFSGVLAAQFIHDALS 294
Query: 356 --IEGSENGTRMIDE 368
I EN T+ I+E
Sbjct: 295 GDINALENYTQAINE 309
>gi|94264329|ref|ZP_01288121.1| Monooxygenase, FAD-binding:FAD dependent oxidoreductase [delta
proteobacterium MLMS-1]
gi|93455223|gb|EAT05436.1| Monooxygenase, FAD-binding:FAD dependent oxidoreductase [delta
proteobacterium MLMS-1]
Length = 343
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 126/298 (42%), Gaps = 51/298 (17%)
Query: 75 ETFLIER-KLDNCKPCGGAIPLC-MVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLK 132
E ++ER KPC G IP + GE LP ++++R + ++++ + D +
Sbjct: 30 EVVVLERLPTVGAKPCAGGIPAGGLAGE--LPRELLERSFRQQRVVTDRH---DFTIS-A 83
Query: 133 PHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGG 191
P I V RE L + R++AE GA ++ +++D + + + +G
Sbjct: 84 PEPIIHTVDREKLGRWQRQQAEAAGAKILTATRALQID------------HHQLESDRG- 130
Query: 192 VGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVG 251
+ ++GADG+NS V + + G + +V +M ++ N A G
Sbjct: 131 -----SWRFSFLVGADGSNSLVRRHLGLGLQRAGLGITYQVPGDFAEMEWHLNPAHFGNG 185
Query: 252 DDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIP 311
Y W+FP +VG ++G I+ QL R + G K+
Sbjct: 186 -------YAWIFPHGASASVGV--YAYRGVIRSHQLHEHFRQWAEQRGIKLA-------D 229
Query: 312 EHPRPRRLS--------GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSEN 361
HPR +S G + L GDAAG + +GEGI A SGR A AI+ E
Sbjct: 230 SHPRASLVSFDYRGARFGNILLAGDAAGLASGLTGEGIAAAIYSGRQVAAAILADGEQ 287
>gi|366157716|ref|ZP_09457578.1| oxidoreductase [Escherichia sp. TW09308]
Length = 429
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 139/319 (43%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEKM------VYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + I E++ E +A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGITPEQINDRFNVTDDEGVAWLFAGSP-SDGLMGGGFIY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+H +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNHDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNDGVMIVGDAAGF 306
>gi|20090343|ref|NP_616418.1| geranylgeranyl reductase [Methanosarcina acetivorans C2A]
gi|74532634|sp|Q8TQQ6.1|GGR_METAC RecName: Full=Digeranylgeranylglycerophospholipid reductase;
Short=DGGGPL reductase; AltName:
Full=2,3-di-O-geranylgeranylglyceryl phosphate
reductase; AltName: Full=Geranylgeranyl reductase;
Short=GGR
gi|19915347|gb|AAM04898.1| geranylgeranyl reductase [Methanosarcina acetivorans C2A]
Length = 407
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 150/345 (43%), Gaps = 34/345 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CG-GAIPLCMVGEFDLPLDIID 109
V VIG GPAG AA+T A+ G++ LIE++ + P C G + ++ I
Sbjct: 7 VLVIGAGPAGSIAAKTAAEKGLDVLLIEKRQEIGDPVRCAEGVNKEYLKKHVEIDNSWIC 66
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----INGL 164
+ ++ SP+ V++ + + E ++ R++ D L E A K GA V GL
Sbjct: 67 ADLKGSRIYSPNGTKVEMAEEISGGEVGYVLERKIFDRALAEHAAKAGAEVRVKTRATGL 126
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK----SINAG 220
++ D + +G++ + VIGADG S+V + +
Sbjct: 127 IIEDDFVKGARLM-------------NLGKEYEVRAKIVIGADGVESKVGRWAGIDTSLK 173
Query: 221 DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHK 279
D Q + D Y E Y+G++++P Y W+FPK + A VG G + ++
Sbjct: 174 PIDIETCAQYLIAGADIDPEY----CEFYIGNEIAPGGYVWIFPKGEGKANVGVGILGNR 229
Query: 280 -GDIKKFQLA-TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKC 336
G K + N + K KI+ + +P + S + LVGDAA
Sbjct: 230 TGKFKPRPVDYLNNFVEKKFPNAKIVEMVFGGVPVSGSIEKTSVNGLMLVGDAARQSDPI 289
Query: 337 SGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKT 381
+G GI A +G++ EA E +G +++ + Y ++W +T
Sbjct: 290 TGGGILNAMDAGKIAGEAAYEAISSGDVSLEKLE-EVYEKRWRET 333
>gi|386384094|ref|ZP_10069510.1| electron transfer oxidoreductase [Streptomyces tsukubaensis
NRRL18488]
gi|385668454|gb|EIF91781.1| electron transfer oxidoreductase [Streptomyces tsukubaensis
NRRL18488]
Length = 428
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 159/373 (42%), Gaps = 45/373 (12%)
Query: 42 TSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCG-GAIPLCMVG 99
T P LT + V V+G GPAG A LAK G++ L+E+ K CG G P
Sbjct: 2 TQP-LTEHSADVIVVGAGPAGATTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQ 60
Query: 100 EFDLPLDIIDR----KVTKMKMISPS-NVAVDIGQTLKPHEYIGMVR-REVLDAYLRERA 153
+ +DI + + +++I + +D + +Y G+VR R+ D L +A
Sbjct: 61 LVAMGIDISEEAGWLRNKGLRIIGGGVRLQLDWPELASYPDY-GLVRKRDDFDEQLARQA 119
Query: 154 EKNGASVINGLFMKMDLPRNFEQPYVLYYTE-YDGTKGGVGEKRT---LEVDAVIGADGA 209
+K GA + N P V T G +GE++T V+ ADG
Sbjct: 120 QKAGARLYERC--------NVGAPIVDERTRRITGVHAKLGEEKTPVTFHAPLVVAADGN 171
Query: 210 NSRVAKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDFYGWV 262
+SR++ ++ D +A + P Y E+ E++ G+D YGW+
Sbjct: 172 SSRLSLAMGLHRREDRPMGVAVRTYFTSPRHDDDYLESWLELWDRRGPGEDRLLPGYGWI 231
Query: 263 FPKCDHVA-VGTGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIRVEAHP 309
F D + VG G + K+ +A ++ + G IR A P
Sbjct: 232 FGMGDGTSNVGLGVLNTSDSFKELDWREVLKAWCASMPEEWGYTEENMTG--PIRGAALP 289
Query: 310 IPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEG 369
+ + +P G + LVGDA G V +GEGI +A +SG++ A+ I++ + T E
Sbjct: 290 MAFNRQPHYTRG-LLLVGDAGGLVNPFNGEGIAYAMESGQIAADVIVQATARATPAQREL 348
Query: 370 DLRKYLEKWDKTY 382
L +Y + TY
Sbjct: 349 ALHRYPKILKDTY 361
>gi|452209305|ref|YP_007489419.1| Geranylgeranyl diphosphate reductase [Methanosarcina mazei Tuc01]
gi|452099207|gb|AGF96147.1| Geranylgeranyl diphosphate reductase [Methanosarcina mazei Tuc01]
Length = 396
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 147/357 (41%), Gaps = 56/357 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIP-----LCMVGEFDLPL 105
+ V+G GPAG AA AK G L+++K + P C G +P ++ E DLP
Sbjct: 9 IVVVGAGPAGSTAALYAAKKGASVLLLDKKREIGSPIQCAGFLPDASEVKALLPESDLPG 68
Query: 106 DIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
+ + ++ P I E+ V+ VLD R R ++ F
Sbjct: 69 AL--KSYPDSCVLQPIKTQRIIPPNCNAKEF--AVKGAVLD---RRRYDQ---------F 112
Query: 166 MKMDLPRNFEQPYV-LYYTEYDGTK---GGVGEKRTLEVDAVIGADGANSRVAKS----- 216
+ + V T+ G+ G+ K T+ A+IGADG NS VAKS
Sbjct: 113 LAGQAAEAGAELMVKTRVTKIQGSTVETSGIFGKHTIRAKAIIGADGPNSLVAKSRGLIT 172
Query: 217 -INAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVGTG 274
A + AI +Q R D + EMY G D P Y WVFP+ D VG G
Sbjct: 173 KPEAKETSVAIEYQVRNVDTDPDAL------EMYFGKDYVPGGYAWVFPEGKDRANVGIG 226
Query: 275 T--------VTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVAL- 325
V+ K + +F + A K+ I+ V A IP + P + +L
Sbjct: 227 IRSCMAEKGVSAKEYLHRF-IKKHPVAGPKLKNAVIMNVIAGIIPVNGAPANTATADSLV 285
Query: 326 VGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTY 382
VGDAAG++ +G GI A +G++ E E + + DL +Y +W +
Sbjct: 286 VGDAAGHIIATNGGGIPPAMIAGKIAGETAAEFAAG------KCDLEEYDRRWRAQF 336
>gi|300114633|ref|YP_003761208.1| geranylgeranyl reductase [Nitrosococcus watsonii C-113]
gi|299540570|gb|ADJ28887.1| geranylgeranyl reductase [Nitrosococcus watsonii C-113]
Length = 384
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 174/406 (42%), Gaps = 67/406 (16%)
Query: 69 LAKNGVETFLIERK-LDNCKPCGGAIP-------LCMVGEFDLPLDIIDRKVTKMKMISP 120
LA G++ L+ERK K CGG + + + GE P +++R +
Sbjct: 22 LAALGLKVALVERKNFPREKLCGGLLSARARKEFMRIFGENKWP-AVVERTARGANLYYQ 80
Query: 121 SNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVL 180
++ + H+ R DA L A + GA ++ G+ V+
Sbjct: 81 THYL----NGVHDHQPFFFTSRIHFDACLAALAREAGAYLLEGV--------------VV 122
Query: 181 YYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSI---NAGDYDYAIAFQERVKIPDE 237
DG + + L+ D V+GADG +SR+A++I A + + A+ + +++P E
Sbjct: 123 TSLAADGKAVHLNNGKMLKTDFVVGADGVHSRIAQAILLHTASNKNLALGLE--IEVPLE 180
Query: 238 KMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTG-TVTHKGDIKKFQLATRNRAKDK 296
E+Y+G V+ YGW+FPK + VG G +T D+K +T N +
Sbjct: 181 LTTKTVVDPEIYLG--VAKWGYGWIFPKKETQTVGVGGLLTKNQDLK----STFNMFLHQ 234
Query: 297 ILGG-KIIRVEAHPIPEHPRPRRLSGR--VALVGDAAGYVTKCSGEGIYFAAKSGRMCAE 353
G IR + + +P R GR + LVGDAAG V +GEGI FA +SGR+ A+
Sbjct: 235 HYGPLPNIRRKGYHLPFGSYQRN-PGRANILLVGDAAGLVEPITGEGIAFAMQSGRLAAK 293
Query: 354 AIIEGSENGTRMIDEGDLRKYLEKW-------DKTYWPTYKVL-DVLQKVFYRSNPAREA 405
AI + G E L YL ++ + Y V D +Q++F P ++
Sbjct: 294 AIATAAGAGR---PETALAHYLLEYQSIVSLFSQASMMRYLVFPDPMQRLFVNLLPHSKS 350
Query: 406 FVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRAN 451
V D ++ + Y ++L V +GS + A+
Sbjct: 351 MVRRYLDLLAGEIDYKDY-------------MRLMVKKLGSRISAS 383
>gi|20089577|ref|NP_615652.1| geranylgeranyl reductase [Methanosarcina acetivorans C2A]
gi|19914493|gb|AAM04132.1| geranylgeranyl reductase [Methanosarcina acetivorans C2A]
Length = 389
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 167/369 (45%), Gaps = 44/369 (11%)
Query: 73 GVETFLIERK-LDNCKPCGGAIP----LCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDI 127
G+ T L+E++ KPCGGA+ C+ +F+LP +++R ++K+++ +
Sbjct: 24 GISTLLLEKENFPRYKPCGGALSPYALSCL--DFELPESVVERDISKVRV----HFRELC 77
Query: 128 GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDG 187
+ + + +V R+ D L ++A + G V G + +D E + E
Sbjct: 78 LERQRDYRLALLVSRKAFDNLLLDKARETGIEVHCGEKV-LDCEEGEE------WVEVRT 130
Query: 188 TKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVY---YEN 244
++ K L + G++G + A +Y +A +IP+E V +
Sbjct: 131 SRNSYLAKFVLIAE---GSEGILKYKVRPQRARRTEYDLALVS--EIPEEDEVIRNRFPG 185
Query: 245 LAEMYVGDDVSPDFYGWVFPKCDHVAVG-TGTVTHKGDIKKFQLATRNRAKDKILGGKII 303
+ +++ G V+P YGWVFP + +VG GT H KK ++ + G+
Sbjct: 186 MVDIHFG--VAPGGYGWVFPHAGYYSVGVVGTAEHLKHPKK---VMQDFLQANDFSGE-F 239
Query: 304 RVEAHPIPEHPRPRR-LSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENG 362
+V +H IP R+ +S R+ L GDAAG+V GEGI +A +SG++ AE + +
Sbjct: 240 QVCSHIIPVGGIKRKTVSSRILLSGDAAGFVDAFIGEGIAYAIRSGQLAAEIVADLVLYN 299
Query: 363 TRMIDEGDLRKYLEKWDKTY-------WPTYKVLDVLQKVFYRSNPAREAFVEMCADEYV 415
++ DL++Y + + + KV+ + ++ +RE ++ DE V
Sbjct: 300 RKL---SDLKEYESRCGQEFGNFLVSSLKLEKVMHRFPETSFKLALSREEILDKYLDEVV 356
Query: 416 QKMTFDSYL 424
+ Y+
Sbjct: 357 INRSHKDYV 365
>gi|161528139|ref|YP_001581965.1| geranylgeranyl reductase [Nitrosopumilus maritimus SCM1]
gi|160339440|gb|ABX12527.1| geranylgeranyl reductase [Nitrosopumilus maritimus SCM1]
Length = 402
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 147/348 (42%), Gaps = 47/348 (13%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
+ V+GGGPAG +AA T +KNG++ LIE++ + G + + EF +P D +
Sbjct: 7 LVVVGGGPAGSSAAYTASKNGLKVILIEKEESIAESVRTSGVTWIQNIEEFGIPEDCYN- 65
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDA-----YLRERAEKNGASVINGLF 165
V + SP+N V IG T+ R VLD +L +AE G ++
Sbjct: 66 PVKNFEFYSPNN-KVSIGDTV--------ARSAVLDVRKTYRWLASQAEAQGTEIVVNTT 116
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRT-LEVDAVIGADGANSRVAKSINAGDYDY 224
+K D+ ++ + G K EK VI A G S VAKS+
Sbjct: 117 VK-DVIKDESGKII-------GVKAIQNEKEIEFFGKVVIDASGFQSTVAKSMG------ 162
Query: 225 AIAFQERVKIPDEKMVYYENLAE----MYVGDDVSPDFYGWVFPKCDHVA---VGTGTVT 277
+ ER E E++ + VG+ SP Y W+FP D++A VG G
Sbjct: 163 FVKQWERFGAGAEYEAKVEHVKADTWWLMVGEKYSPAGYAWIFPLGDNIARIGVGIGKPD 222
Query: 278 HKGD-IKKFQLATRNRAKDKILGGKIIRVEAH--PIPEHPRPRR-LSGRVALVGDAAGYV 333
D + + N+ GKI +E H IP R+ + + LVGD+AG
Sbjct: 223 SPVDPTARLKELIENKEGPIANLGKIEPIEFHYGLIPNDGLSRKTVYDNLILVGDSAGQA 282
Query: 334 TKCSGEGIYFAAKSGRMCAEAIIEG-SENGTRMIDEGDLRKYLEKWDK 380
EGI +A K GR+ + + N T E L +Y + W K
Sbjct: 283 NPLVLEGIRYAIKFGRIAGDVASKAIKANDTS---EKKLSEYEDNWKK 327
>gi|355572983|ref|ZP_09043951.1| geranylgeranyl reductase [Methanolinea tarda NOBI-1]
gi|354823995|gb|EHF08254.1| geranylgeranyl reductase [Methanolinea tarda NOBI-1]
Length = 392
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 128/326 (39%), Gaps = 43/326 (13%)
Query: 66 AETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSN- 122
A A+ G+ L+E P C G + L E +P I V +++S
Sbjct: 20 ARLCAEQGLSVCLLEEHASAGIPVQCAGLLSLAAFEECSVPDSCIIATVRGARIVSSLGP 79
Query: 123 -VAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLY 181
++ D G K H +V R +LD + RA + GA + MK R V
Sbjct: 80 VLSFDAGVP-KAH----VVDRAILDREMLARAARAGAEI----RMKTAFFRREGHSIVTR 130
Query: 182 YTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVY 241
G+ K + ++GADGA SRVA+ + +A + D
Sbjct: 131 ---------GIRGKEEISFGVLVGADGAASRVARESGMPRPAHVLAGLQ----ADIAWRM 177
Query: 242 YENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKG--DIKKFQLATRNRAKDKILG 299
E L E++ D SPDF+GW P + G V G D++ +T R + G
Sbjct: 178 DEGLVEIH--PDASPDFFGWAIP----IGPGRARVGLAGLRDVR----STFPRFLGRFFG 227
Query: 300 G---KIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAII 356
+ + + IP PR R RV LVGDAAG SG G+Y ++ R A I
Sbjct: 228 DGHQASVHLVSGAIPIGPRARTYGNRVLLVGDAAGMAKPTSGGGVYTGVRAARHAAHVIG 287
Query: 357 EGSENGTRMIDEGDLRKYLEKWDKTY 382
E G + DL Y + W +
Sbjct: 288 EAVRKGK--FSDDDLSPYEKAWRADF 311
>gi|312136741|ref|YP_004004078.1| geranylgeranyl reductase [Methanothermus fervidus DSM 2088]
gi|311224460|gb|ADP77316.1| geranylgeranyl reductase [Methanothermus fervidus DSM 2088]
Length = 369
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 167/393 (42%), Gaps = 58/393 (14%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDIIDR 110
V VIG GP G A LA+ G + E+K P C G + + LP ++I
Sbjct: 5 VIVIGAGPIGSTVARFLAEEGFNVCIYEKKKQVGLPLQCAGLVSRKISKLNPLPENVIIN 64
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIG-MVRREVLDAYLRERAEKNGASVINGLFMKMD 169
KV K + SPSN+++++ + +Y+G ++ R D YL +A +NG V G
Sbjct: 65 KVRKARAYSPSNISINVSK----EDYVGYVIDRVKYDQYLLNKAIENGVDVFLG------ 114
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSR-VAKSINAGDYDYAIAF 228
E+ +D K V K ++ V+ A G NS+ V+K I A Y I
Sbjct: 115 --HKVEK------INHDDAKVYVKNK-IVKAKFVVDASGYNSKAVSKLIPAIQYLVEIDN 165
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLA 288
E+ + E+++ + P F W+ P +A +K D+ +++
Sbjct: 166 IEK------------DCVEIHLFSKLLPGF-AWMIPLSKKLARIGLLSGNKKDL--YRIM 210
Query: 289 TRNRAKDKILGGKIIRVEAH-PIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
+ + K G + + P+PE + +GR L+GDAA V + G+ +
Sbjct: 211 DKYKVK-----GVLEKYRGFVPVPEFKKI--YNGRTILIGDAASQVKPTTYGGLILGFSA 263
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFV 407
++ E + E E I L+KY E++ K Y ++ +++K+ N + ++
Sbjct: 264 AKIATEVLKEAIEENNPKI----LKKYHEEYYKKYGKELRIQLLIKKILSLMNDKQLDYL 319
Query: 408 -----EMCADEYVQK---MTFDSYLYKRVVPGN 432
E +E + K M S L+K V+ N
Sbjct: 320 FRKIKENNIEELLSKYGDMDKYSKLFKEVIKKN 352
>gi|320108978|ref|YP_004184568.1| geranylgeranyl reductase [Terriglobus saanensis SP1PR4]
gi|319927499|gb|ADV84574.1| geranylgeranyl reductase [Terriglobus saanensis SP1PR4]
Length = 410
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 141/333 (42%), Gaps = 46/333 (13%)
Query: 69 LAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLDIIDR----KVTKMKMISP-- 120
L + GV+ LIE+ KPCGG + ++ F ++ + ++ ++ + SP
Sbjct: 22 LGQAGVKALLIEKAKAFPREKPCGGGLSSRVLVRFPYLKEVFEEVGVNQIRRVYLESPDG 81
Query: 121 SNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVL 180
SN + +P + +VRR DA L RA A+VI P
Sbjct: 82 SNAVHE-----QPEPIMHLVRRWEFDAALFRRA----AAVI---------PVEMGTTVRT 123
Query: 181 YYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS----INAGDYDYAIAFQERVKIPD 236
+ DG + + R VIGAD ANS +A+ + ++A+ E + +
Sbjct: 124 LTVKADGVELEATDGRVFTAKMVIGADSANSLIARHAGLRVGEARDEFAVDMMEETPVAE 183
Query: 237 EKMVYYENLAEMYVGDDVSPDF-YGWVFPKCDHVAVGTGT--------VTHKGDIKKFQL 287
+ + ++ M++ ++ F YG++FPK DHV +G G + KG
Sbjct: 184 MQAARPDTVS-MFL--TLTKTFGYGYIFPKKDHVNLGFGCKMDYYLTELRGKGKEHHAGW 240
Query: 288 ATRNRAKDKILG-GKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAA 345
+AK + G + +A PIP P R + RV L GDA G+V + EGI +A
Sbjct: 241 VDEMKAKGFVSGETQPAGYKAFPIPISGPLARTYADRVLLAGDAGGFVNAFTAEGIVYAM 300
Query: 346 KSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKW 378
SG + A A ++ + D L Y + W
Sbjct: 301 TSGDLAAVAAMQAVK--AERFDTAQLASYEKAW 331
>gi|297620212|ref|YP_003708317.1| geranylgeranyl reductase [Methanococcus voltae A3]
gi|297379189|gb|ADI37344.1| geranylgeranyl reductase [Methanococcus voltae A3]
Length = 391
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 154/351 (43%), Gaps = 40/351 (11%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGE-FDLPLD--I 107
V VIG GPAG A+ +K G +T L+E+ + +P C A+P + E + +P D
Sbjct: 10 VVVIGAGPAGSMASYNASKMGAKTLLVEKSQEIGEPVRCAEAVP--KIDEIYGIPADPSF 67
Query: 108 IDRKVTKMKMISPS--NVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
+ K+ +++P+ +AV G+T Y+ V R++ D YL R+ K G +
Sbjct: 68 VRTKLDGGYIVAPNGKTIAVKGGKT---DGYV--VERKIFDKYLAIRSAKQGTKIA---- 118
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
+K + N EQ Y + +GE+ ++ VI ADG S +A+ +
Sbjct: 119 VKSRV-VNIEQDGSGYLVSIN----HMGEEYKIKTKIVIAADGVESSMAEMVGLKSKKNV 173
Query: 226 --IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIK 283
+ ++ + K + +N+ E+Y G V+P Y W+FPK D V VG G + K
Sbjct: 174 NEVCSCAEYEMTNGKCI-DDNMLELYFG-SVAPKGYAWIFPKGDTVNVGLGVIGAKKSAL 231
Query: 284 KFQLATRNRAKDKILGGKI-------IRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKC 336
++ + + ++ G++ + P+ P + +VGDAAG ++
Sbjct: 232 EY---LDDFISNPVINGRLDNATPVEFKCGGAPVG-GPIEKTFKEGFMIVGDAAGQISPL 287
Query: 337 SGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYK 387
+G GI + G + E + G E + +Y W + Y K
Sbjct: 288 TGGGIALSMDCGLIAGE--VAGKCIMHNDCSEEAISEYETNWHEKYLHLLK 336
>gi|147919190|ref|YP_687075.1| FAD-dependent oxidoreductase [Methanocella arvoryzae MRE50]
gi|110622471|emb|CAJ37749.1| predicted FAD-dependent oxidoreductase [Methanocella arvoryzae
MRE50]
Length = 394
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 138/314 (43%), Gaps = 39/314 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDL-PLDIID 109
V V+G GPAG AA+ A NG +T L+E P C G I + E +L I+
Sbjct: 5 VIVVGAGPAGSMAAKYAALNGAKTLLLEEHGQVGSPVACTGLISRNALDECELGEGSFIN 64
Query: 110 RKVTKMKMISPS--NVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK 167
+++ + SP+ N+ +D +T+ Y+ V R+++D + RA GA ++ + K
Sbjct: 65 KRIRGAFVHSPNNHNILLDGKRTMA---YV--VERKIMDREMARRAVNAGAEIL--ISTK 117
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIA 227
+ + T DGT+ + VIGADG S+VA++ G+ + +
Sbjct: 118 AEGITPVPGGISVKVTGPDGTE-------DITASVVIGADGVKSKVARAAGLGNLPHVCS 170
Query: 228 FQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVGTGTVTHKGD----- 281
+++ + EM+ G +P + W P D VG + H +
Sbjct: 171 ---AIQVEATYEPRNPDFVEMFSGSRYAPKHFAWAVPTSGDCCRVGLISDEHAHEYLQRL 227
Query: 282 IKKFQLATRN--RAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGE 339
+ + ++ ++ A D I+GG +P R ++ + +VGDAAG V S
Sbjct: 228 LTEHEIVSKKARSAVDLIMGG---------VPVGTLKRTVTDNIMIVGDAAGQVKPISYG 278
Query: 340 GIYFAAKSGRMCAE 353
GIY A+ R+ E
Sbjct: 279 GIYTGARCARIAGE 292
>gi|332158606|ref|YP_004423885.1| hypothetical protein PNA2_0965 [Pyrococcus sp. NA2]
gi|331034069|gb|AEC51881.1| hypothetical protein PNA2_0965 [Pyrococcus sp. NA2]
Length = 370
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 135/314 (42%), Gaps = 48/314 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPLCMVGEFDLPLDIIDRK 111
V +IGGGP G A LA +E ++ERK K C G I LP +
Sbjct: 5 VLIIGGGPVGNYLASLLAGK-LEVAVVERKGSFGGKACTGIIGAENYEALGLPEKAVLNA 63
Query: 112 VTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLP 171
IS + V +I + + P Y +V R++L+ L +RA + GA
Sbjct: 64 FNGAFFISRAKV-FEIHRNI-PQAY--LVDRKILERELAKRAMRRGAE------------ 107
Query: 172 RNFEQPYVLYY--TEYDGTKGG------VGEKRTLEVDAVIGADGANSRVAKSINAGDYD 223
YY T + G K G + + +E +GADG NS VA+ I A
Sbjct: 108 ---------YYLATTFIGFKNGKAILQHLDSRLEIEAKFYVGADGVNSSVAREIGAETRG 158
Query: 224 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKGDI 282
+ E + + + + E++V D++P+F+ WV P + A +GT GDI
Sbjct: 159 EILKGWEVEVLGN----FKRDHVEVWVNKDINPEFFFWVAPINEEEARIGT-----FGDI 209
Query: 283 KKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIY 342
+ R R D +I+ +++ I R + G +A+VGDAA + +G GI
Sbjct: 210 ESLANFLRIRRIDP---HRIVEIKSGAIIVGERRPWVRGNIAIVGDAALQIKPTTGGGIV 266
Query: 343 FAAKSGRMCAEAII 356
F A + A+AI+
Sbjct: 267 FGAYCAKALAKAIL 280
>gi|374313322|ref|YP_005059752.1| geranylgeranyl reductase [Granulicella mallensis MP5ACTX8]
gi|358755332|gb|AEU38722.1| geranylgeranyl reductase [Granulicella mallensis MP5ACTX8]
Length = 399
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 152/413 (36%), Gaps = 89/413 (21%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKL-DNCKPCGGAIPLCMVGEFDLPLDIIDRK 111
V ++G GPAG +AA LA+ G ++++++ K C + + ++ + +
Sbjct: 6 VLILGAGPAGCSAAYDLARAGKRVLMLDKRMFPRHKACACGLTRKTLKALRYSVEPVVER 65
Query: 112 VTK---MKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV--INGLFM 166
V ++ I+ + +T P M RE DA+ ++ GA + + G+
Sbjct: 66 VCHEIVLRHIASHTAQRVLVRTRDP--ICAMAVRERFDAFCLQQTLAAGAELCKVEGIVA 123
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANS---RVAKSINAGDYD 223
+ E T G+ TLE VIGADG+N R+A+ + G
Sbjct: 124 LREETDRIEVDI--------ATAAGI---ETLEAPVVIGADGSNGQSRRLAEGLRTGKEV 172
Query: 224 YAIAFQERVK-----IPDEKMVYYENLAEMYVGDDVSPDF----------YGWVFPKCDH 268
A A + E V Y L G D D YGW+FPK DH
Sbjct: 173 RAAALPAEPQWYARGFALETTVPYAMLPIALPGGDTPQDLVFDFAPLPGGYGWLFPKGDH 232
Query: 269 VAVGTGTV--THKGD--IKKFQLATRNRAKDKILG--------GKIIRVEAHPIPEHPRP 316
V +G G T GD +K A + LG G+ + + H
Sbjct: 233 VNIGVGAFAPTPTGDACLKSVTRALLTEYTEANLGITTLPNITGQYLGMGGQAYVPH--- 289
Query: 317 RRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG---------------------------- 348
GRV L GDAAG V +GEGIY A SG
Sbjct: 290 ----GRVLLAGDAAGLVDPLTGEGIYSAIVSGQAAAAAILACDATDLTEEYARRLQPLQK 345
Query: 349 -----RMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVF 396
R A+A E G R++ LR + K P K+L +L K+F
Sbjct: 346 TLAFSRRAAQAFYAHPERGFRVMRTPLLRSLVLKTYSDGLPPTKLLGILSKIF 398
>gi|435851721|ref|YP_007313307.1| geranylgeranyl reductase family protein [Methanomethylovorans
hollandica DSM 15978]
gi|433662351|gb|AGB49777.1| geranylgeranyl reductase family protein [Methanomethylovorans
hollandica DSM 15978]
Length = 396
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 147/354 (41%), Gaps = 58/354 (16%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLC-----MVGEFDLPL 105
+ VIG GPAG AA A+ G+ L+++K D P CGG +P ++ +LP
Sbjct: 9 IIVIGAGPAGSTAATYAAQRGMSVLLVDKKKDIGVPLQCGGFLPHVETLQELIPSAELPF 68
Query: 106 DI-------IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGA 158
+ I + + I+P+ ++ K E G DA R R +K+ A
Sbjct: 69 TLEEYPSSCIHATTSFQRFIAPNGIS-------KGFEVQG-------DALDRRRFDKHLA 114
Query: 159 SVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS-- 216
SV + + N VL + T G + ++ +IGADG NS VA S
Sbjct: 115 SVAAKTGAHLLIATN-----VLEVNRTEVTMDGAFGRYEVQGKVIIGADGPNSIVAASNG 169
Query: 217 -INAGD-YDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPK-CDHVAVGT 273
+ D + AF+ + D + EMY G D P Y W+ + D +G
Sbjct: 170 MVREPDPMGTSTAFEYELSDVDVD----KEAVEMYFGKDYVPGGYAWIISQGGDRANIGV 225
Query: 274 GT--------VTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVAL 325
G + + + KF + A +K+ G II V + +P PR + + L
Sbjct: 226 GIREALFAEHMCARDYLNKF-MCQHPIASEKLKEGNIISVISGLVPVGGAPRVTATKDTL 284
Query: 326 V-GDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKW 378
+ GDAAG++ +G GI A G++ E+ + E R L +Y +W
Sbjct: 285 IAGDAAGHLIATNGGGISTAMVGGKLAGESASDFLEGKCR------LEEYDRRW 332
>gi|304314487|ref|YP_003849634.1| dehydrogenase [Methanothermobacter marburgensis str. Marburg]
gi|302587946|gb|ADL58321.1| predicted dehydrogenase [Methanothermobacter marburgensis str.
Marburg]
Length = 394
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 149/340 (43%), Gaps = 51/340 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V VIG GPAG AA+ A G LI++K + P A + + G L ++ R +
Sbjct: 7 VLVIGAGPAGSTAAKHAAMGGASVLLIDKKSEIGAPKRCAEGVSVGGLESLGIEPNPRWI 66
Query: 113 TK----MKMISPSNVAVDIGQ---TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
TK ++++SP+ V + L YI + R+V D ++ A + G+ +
Sbjct: 67 TKKLDGVRLVSPNGTDVWLTSDKVELPEAGYI--LERKVFDKHMAMDAARAGSEI----- 119
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK--SINAG--- 220
M L E+ Y + +G + ++ VI ADG SRVA+ +N
Sbjct: 120 MVKTLATGMEKTDDGYLVSAE----CMGREFEIKARIVIAADGPESRVARWAGLNTATKP 175
Query: 221 -DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTH 278
D + A F E V + E N E Y G V+P Y W+FPK D +A VG G ++
Sbjct: 176 KDMESAAQF-EMVGVEMED----NNCIEFYFG-SVAPGGYAWIFPKGDDIANVGLGVLST 229
Query: 279 KGDIKKFQL---------ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDA 329
+ D ++ ATRN + + + P+ P+ ++ + +VGDA
Sbjct: 230 ETDKSAYEHLVEFVESCPATRNAQPVE------LNIGGDPVGGMPK-ELVADSLMVVGDA 282
Query: 330 AGYVTKCSGEGIYFAAK----SGRMCAEAIIEGSENGTRM 365
AG V +G GI +GR+ A A+ EG + R+
Sbjct: 283 AGQVNPLTGGGIISGMTGGMLAGRVAAAAVSEGDVSKKRL 322
>gi|327400483|ref|YP_004341322.1| geranylgeranyl reductase [Archaeoglobus veneficus SNP6]
gi|327315991|gb|AEA46607.1| geranylgeranyl reductase [Archaeoglobus veneficus SNP6]
Length = 375
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 130/303 (42%), Gaps = 39/303 (12%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDII 108
+RV V+GGGPAG AA LA+ + ++E P C G I E L +
Sbjct: 1 MRVLVVGGGPAGSLAALHLAEKA-DVTIVEEHPSAGFPVQCAGLISDTCYSE--LRNYVS 57
Query: 109 DR----KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDA-YLRERAEKNGASV-IN 162
DR ++ +++P V+ LK +V R++ D+ LR+ AE + V I
Sbjct: 58 DRCLLNRIEGAFVLAPDGSYVE----LKGRSKAVVVERKIFDSELLRKAAEMDRIDVRIK 113
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDY 222
FM + + + G+ + L+ DA+IGADG S VAK
Sbjct: 114 TRFMNCNGKKALVR--------------GMNGEELLQYDAIIGADGVASTVAKVFGFPRP 159
Query: 223 DYAIAFQE--RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKG 280
+A Q R + DE MV E+Y G D S F+G+ P D +G +
Sbjct: 160 RTLLAMQVECRFEAMDEHMV------ELYFGKDYSDCFFGYAVPLGDTARIGV-VASENP 212
Query: 281 DIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEG 340
L ++ + K + G +I + IP P G VAL+GDAAG V +G G
Sbjct: 213 QQYLMNLLEKHPSVSKRVKGGVIELNTGAIPVKP-INFARGNVALIGDAAGMVKPYTGGG 271
Query: 341 IYF 343
IY+
Sbjct: 272 IYY 274
>gi|91773065|ref|YP_565757.1| geranylgeranyl reductase [Methanococcoides burtonii DSM 6242]
gi|91712080|gb|ABE52007.1| Geranylgeranyl reductase [Methanococcoides burtonii DSM 6242]
Length = 399
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 142/343 (41%), Gaps = 44/343 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDL--PLDII 108
V V+G GP G AA G + +IE P C G + V E D+ D +
Sbjct: 5 VVVVGAGPTGSTAARYATMGGAKVLIIEEHFSIGSPVECTGLLSTRAVSECDVRPEDDFV 64
Query: 109 DRKVTKMKMISPSNVAVDI-GQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-INGLFM 166
V + SP+ + I G+ K + +V R++ D +L A GA + + G
Sbjct: 65 LNSVRGAFVNSPNGTCLPIDGKRTKAY----VVSRKIFDRHLVSLAVDTGAELMLKGRVT 120
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAI 226
+ + V++ +G+ T+ VIGADG S VA+ G D +
Sbjct: 121 GIQQKDGIQLLSVIH----------MGKMITVRSKVVIGADGVKSNVARYTGLGKVDRIL 170
Query: 227 AFQERVKIPDEKMVYYEN---LAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIK 283
+ V+I + VY N E++VG +P F+ W P + ++ V +
Sbjct: 171 S---GVQI---EAVYSSNDTDFVELFVGSQ-APGFFAWTVPVNERISRIGLAVEPGNEHN 223
Query: 284 KFQLATRNRAKDKILGGK----IIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGE 339
+ K+K L G ++ + IP P R S + + GDAAG V SG
Sbjct: 224 AINYLRKIVNKNKHLAGNCTNNMLDLVVGGIPIGPLKRTYSDGILIAGDAAGQVKPTSGG 283
Query: 340 GIYFAA----KSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKW 378
G+Y A +G++ AEA+ E + + R L++Y +W
Sbjct: 284 GVYTGAVCAKMAGQVAAEAVSEENFSANR------LKEYESRW 320
>gi|73748581|ref|YP_307820.1| hypothetical protein cbdb_A744 [Dehalococcoides sp. CBDB1]
gi|289432607|ref|YP_003462480.1| monooxygenase FAD-binding protein [Dehalococcoides sp. GT]
gi|73660297|emb|CAI82904.1| conserved hypothetical protein [Dehalococcoides sp. CBDB1]
gi|288946327|gb|ADC74024.1| monooxygenase FAD-binding protein [Dehalococcoides sp. GT]
Length = 379
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 155/384 (40%), Gaps = 37/384 (9%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDI 107
N V VIG GP G A+ LA+ G E L+E+K + K C G I ++
Sbjct: 2 NTDVLVIGAGPVGLHTAKCLAECGYEVRLLEKKPEAAKQVCCTGIISTECASKYGFDGKY 61
Query: 108 IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK 167
I ++ + SP GQ L +++R+ A + +RA + +
Sbjct: 62 IQNYFSEASVYSPG------GQKL-------LLKRDTPQAIMLDRASFLAKLLQQAINCG 108
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYD-YAI 226
+ F+ + Y +G + E ++ AV+ A G N+ ++++ G+ + +A
Sbjct: 109 VRTSFGFQANSIEYIE--NGLRITTKEGQSFTAKAVVLAAGYNTALSRATGLGEINNFAY 166
Query: 227 AFQERV--KIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKK 284
Q V IP NL+ ++ G +S ++GW+ D A G +T K +
Sbjct: 167 GLQAEVDTSIPS-------NLS-LFTGKAISQGYFGWLSSINDCTA-KMGLLTRKNPFEC 217
Query: 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
+ K ++ K I P+P RV VGD AG + +G GIYF
Sbjct: 218 WSALHNTLYKQGLITAKHINYVCRPVPIGNLSASFGDRVLAVGDFAGQLKPTTGGGIYF- 276
Query: 345 AKSGRMCAEAIIEGSENG--TRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR-SNP 401
G +CA+ + + T + + +L +Y + W + +L + + +
Sbjct: 277 ---GLLCADLAVSCLDKNIKTNKLSKANLAEYEKNWKSLIGSELYIGRLLSRAYTGIDDR 333
Query: 402 AREAFVEMCADE-YVQKMTFDSYL 424
E + CA ++KM S+L
Sbjct: 334 LLEQIFKKCATSGMIEKMAAKSHL 357
>gi|333909912|ref|YP_004483645.1| digeranylgeranylglycerophospholipid reductase [Methanotorris igneus
Kol 5]
gi|333750501|gb|AEF95580.1| Digeranylgeranylglycerophospholipid reductase [Methanotorris igneus
Kol 5]
Length = 391
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 143/331 (43%), Gaps = 32/331 (9%)
Query: 65 AAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDL--PLDIIDRKVTKMKMISP 120
+A AKNG +T LIE+ + +P C AIP + +F + + + ++ + +P
Sbjct: 22 SAYASAKNGAKTLLIEKSQEIGEPVRCAEAIP--SLDDFGIKPSPEFVRNEIKGGFLFAP 79
Query: 121 SNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVL 180
+ V + Q K Y+ V R++ D +L RA K GA + + V
Sbjct: 80 NGKRVTVTQG-KATGYV--VERKIFDKFLAIRAAKKGAKIA------------IKSRVVG 124
Query: 181 YYTEYDGTK---GGVGEKRTLEVDAVIGADGANSRVAK--SINAGDYDYAIAFQERVKIP 235
E DG + E+ ++ VI ADG S VA+ + A I ++
Sbjct: 125 LEEEGDGWNVIVKHLDEEYAVKTKIVIAADGVESNVAEYAGLKAKKNPLDICSCAEYEMT 184
Query: 236 DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKF--QLATRNRA 293
+ +++ +N+ E Y G+D++P Y W+FPK D VG G K + + A
Sbjct: 185 NVELLD-KNMMEFYFGNDIAPGGYLWIFPKGDTANVGLGVRGSKKKAIDYLNEFLENGLA 243
Query: 294 KDKILGGKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCA 352
KD++ + + P P + + +VGDAAG ++ +G GIY A G +
Sbjct: 244 KDRLKNATPVEFKVGGAPVGGPIEKTYDDGILVVGDAAGQISPLTGGGIYLAMDCGLIAG 303
Query: 353 EAIIEGSENGTRMIDEGDLRKYLEKWDKTYW 383
E + +N E L +Y +W + ++
Sbjct: 304 EVAGKAIKNNDW--SEKVLSEYERRWKEKHY 332
>gi|340623575|ref|YP_004742028.1| geranylgeranyl reductase [Methanococcus maripaludis X1]
gi|339903843|gb|AEK19285.1| geranylgeranyl reductase [Methanococcus maripaludis X1]
Length = 390
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 145/321 (45%), Gaps = 33/321 (10%)
Query: 45 KLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFD 102
K N + V V+G GPAG A+ +KNG +T LIE+ + P C A+P + +F
Sbjct: 2 KALNDSYDVVVVGAGPAGSMASYNASKNGAKTLLIEKSQEIGTPVRCAEAVP--RLEDFG 59
Query: 103 LPLD--IIDRKVTKMKMISPSN--VAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGA 158
+ D + + +I+P+ + V G+T Y+ V R+V D +L R+ + G
Sbjct: 60 INPDPSFVKSYIRGGYLIAPNGKKIVVKGGKT---DGYV--VERKVFDKFLAIRSGQAGT 114
Query: 159 SV-INGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK-- 215
+ + K++ + +V Y +G++ ++ VI ADG S +A+
Sbjct: 115 QIAVKSRVTKIEKTDDGYNVFVNY----------LGDEYIVKSKIVIAADGVESNIAEYA 164
Query: 216 SINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGT 275
+ I ++ + K++ E + E Y G D+ P Y W+FPK D V VG G
Sbjct: 165 GLKTKKNPKEICSCAEYEMTNVKLLNNE-MMEFYFG-DICPKGYIWLFPKGDTVNVGIGV 222
Query: 276 VTHKGDIKKF--QLATRNRAKDKILGGKII--RVEAHPIPEHPRPRRLSGRVALVGDAAG 331
+ K + + T + ++ + +V P+ P + ++ + +VGDAAG
Sbjct: 223 IDSKKRAIDYLDEFLTHPLVEGRLDNAIPVEFKVGGDPVG-GPIKKTVADNIMVVGDAAG 281
Query: 332 YVTKCSGEGIYFAAKSGRMCA 352
+V+ +G GI + G M
Sbjct: 282 HVSPLTGGGIGLSMDCGLMAG 302
>gi|408679979|ref|YP_006879806.1| Geranylgeranyl reductase [Streptomyces venezuelae ATCC 10712]
gi|328884308|emb|CCA57547.1| Geranylgeranyl reductase [Streptomyces venezuelae ATCC 10712]
Length = 428
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 156/371 (42%), Gaps = 41/371 (11%)
Query: 42 TSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCG-GAIPLCMVG 99
T L+ + V V+G GPAG A LAK G++ L+E+ K CG G P
Sbjct: 2 TEQPLSEHSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQ 61
Query: 100 EFDLPLDIIDR----KVTKMKMISPS-NVAVDIGQTLKPHEYIGMVR-REVLDAYLRERA 153
+ +DI + + +++I + +D + +Y G+VR R+ D L +A
Sbjct: 62 LVSMGIDISEEAGWLRNRGLRIIGGGVRLELDWPELASYPDY-GLVRKRDDFDEQLARQA 120
Query: 154 EKNGASVINGLFMKMDLPRNFEQPYVLYYT-EYDGTKGGVGEKR---TLEVDAVIGADGA 209
+K GA + N P + T G +GE++ T V+ ADG
Sbjct: 121 QKAGARLYERC--------NVGAPVIDDRTGRITGVHAKLGEEKREVTFHAPLVVAADGN 172
Query: 210 NSRVAKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDFYGWV 262
++R++ ++ D +A + P Y E+ E++ D + P YGW+
Sbjct: 173 STRISLAMGLHRREDRPMGVAVRTYFTSPRHDDDYLESWLELWDRRGPQDRLLPG-YGWI 231
Query: 263 FPKCDHVA-VGTGTVTHKGDIKKFQLATRNRAKDKILG----------GKIIRVEAHPIP 311
FP D + VG G + ++ +A + + IR A P+
Sbjct: 232 FPMGDGTSNVGLGILNSSKAFRELDWREVLKAWCASMPEDWGYTPENMTQPIRGAALPMA 291
Query: 312 EHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDL 371
+ +P G + LVGDA G V +GEGI +A +SG++ A+ I++ T E L
Sbjct: 292 FNRQPHYTKG-LLLVGDAGGLVNPFNGEGIAYAMESGQIAADVIVQAHARATPAQRELAL 350
Query: 372 RKYLEKWDKTY 382
R Y + TY
Sbjct: 351 RNYPQVLKDTY 361
>gi|329935999|ref|ZP_08285799.1| electron transfer oxidoreductase [Streptomyces griseoaurantiacus
M045]
gi|329304477|gb|EGG48355.1| electron transfer oxidoreductase [Streptomyces griseoaurantiacus
M045]
Length = 429
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 162/380 (42%), Gaps = 46/380 (12%)
Query: 42 TSPK-LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCG-GAIPLCMV 98
T P+ LT V V+G GPAG A LAK G++ L+E+ K CG G P
Sbjct: 2 TEPQPLTEHTADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATK 61
Query: 99 GEFDLPLDIIDR----KVTKMKMISPSNVAVDIGQT-LKPHEYIGMVR-REVLDAYLRER 152
+ +DI + + +++I V +++ L + G+VR R+ D L +
Sbjct: 62 QLVAMGIDISEEAGWLRNRGLRIIG-GGVRLELDWPDLASYPDYGLVRKRDDFDEQLARQ 120
Query: 153 AEKNGASVINGLFMKMDLPRNFEQPYVLYYT-EYDGTKGGVGEKR---TLEVDAVIGADG 208
A+K GA L+ + N P V T G +GE++ T V+ ADG
Sbjct: 121 AQKAGAR----LYERC----NVGAPIVDDRTGRITGVHAKLGEEKKEVTFHAPLVVAADG 172
Query: 209 ANSRVAKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDFYGW 261
++R++ ++ D +A + P Y E+ E++ D + P YGW
Sbjct: 173 NSTRLSLAMGLHRREDRPMGVAVRTYFTSPRHDDDYLESWLELWDRRGPQDRLLPG-YGW 231
Query: 262 VFPKCDHVA-VGTGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIRVEAH 308
+F D + VG G + K+ +A D + G IR A
Sbjct: 232 IFGMGDGTSNVGLGVLNTSAAFKELDWREILKAWCASMPEDWGYTPDNMTG--PIRGAAL 289
Query: 309 PIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDE 368
P+ + +P G + LVGDA G V +GEGI +A +SG++ A+ I++ T E
Sbjct: 290 PMAFNRQPHYTKG-LLLVGDAGGLVNPFNGEGIAYAMESGQIAADVIVQAHARATPAQRE 348
Query: 369 GDLRKYLEKWDKTYWPTYKV 388
LR+Y + TY Y +
Sbjct: 349 IALRRYPQVLKDTYGGYYNL 368
>gi|116753455|ref|YP_842573.1| geranylgeranyl reductase [Methanosaeta thermophila PT]
gi|116664906|gb|ABK13933.1| geranylgeranyl reductase [Methanosaeta thermophila PT]
Length = 368
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 134/334 (40%), Gaps = 44/334 (13%)
Query: 70 AKNGVETFLIER-KLDNCKPCGGAIPLCMVG--EFDLPLDIIDRKVTKMKMISPSNVAVD 126
A G+ LIE+ K KPCGGA+ F +P ++ID +V+++++ A
Sbjct: 21 AGLGLSVLLIEKEKFPRYKPCGGALSEKARSYLRFRIPDEVIDAEVSRIRIFFRDRCA-- 78
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
+ +P +V R V D L RA GA V+ G +E D
Sbjct: 79 --EISRPERLSTLVTRSVFDDILVRRAADAGAEVLFG-------------KKATGISEED 123
Query: 187 G-TKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENL 245
G + GE + + ++ ADG +++ I GD + V + +
Sbjct: 124 GCVRIMAGE--SYKGRLLVLADGHTGMLSRKICPGDGMRGVCLVSEVAAEETNDCMEIHF 181
Query: 246 AEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRV 305
E+ G Y WVFP +++VG G + R R G R+
Sbjct: 182 GEVDRG-------YAWVFPHGSYLSVGAGGLGSSNIRVIMDRLMRAR-------GFRGRI 227
Query: 306 EAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTR 364
H IP R L GR L GD+AG V +GEGI +A +SG++ A+ E +G
Sbjct: 228 HGHTIPLSGPSRYLGGRRTMLCGDSAGMVDPFTGEGIAYAVRSGQIAAQVASEHLSDGC- 286
Query: 365 MIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398
DL +Y + + + +L ++ +R
Sbjct: 287 -----DLVEYQHRCKREIGDDLRASFLLARIMHR 315
>gi|271962154|ref|YP_003336350.1| geranylgeranyl reductase [Streptosporangium roseum DSM 43021]
gi|270505329|gb|ACZ83607.1| geranylgeranyl reductase [Streptosporangium roseum DSM 43021]
Length = 425
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 150/366 (40%), Gaps = 33/366 (9%)
Query: 42 TSPKLTNRNLR-----VAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCG-GAIP 94
T P RN+ V V+G GPAG A LA+ G++ L+E+ K CG G P
Sbjct: 2 TVPAAMQRNVAEADADVIVVGAGPAGSTTAFHLAQAGLDVLLLEKTTFPREKVCGDGLTP 61
Query: 95 LCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDI---GQTLKPHEYIGMVR-REVLDAYLR 150
+ + +DI + K + + L + G+VR R+ D L
Sbjct: 62 RAVKQLIAMGIDIDAPGWVRNKGLRVVGGGLRFELDWPELSSYPDFGLVRTRQDFDEILA 121
Query: 151 ERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGAN 210
A + G ++ G+ + + + V + DG E+ + V+ ADG +
Sbjct: 122 ANAVRGGVRLLQGVNVTAPILDDRSGHIVGVVAKKDG------EEVSYRSRLVVAADGNS 175
Query: 211 SRVAKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCD 267
+R++ ++ D +A + + P Y E E++ GD + P YGW+F D
Sbjct: 176 TRISLAMGLHKREDRPMGVAVRTYFESPRHDDDYLETWLELWDGDTLLPG-YGWIFGVGD 234
Query: 268 HVA-VGTGTVTHKGDIKKFQLATRNRAKDKIL---GGKI-------IRVEAHPIPEHPRP 316
+ VG G + K R K + G + IR A P+ + +P
Sbjct: 235 GTSNVGLGLLNTSESFKGMDYRDLLRRWVKNMPPEWGYVEENMTTPIRGAALPMAFNRQP 294
Query: 317 RRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLE 376
G V LVGDA G + +GEGI +A ++G++ AE I++ T E LR Y +
Sbjct: 295 HYTRGLV-LVGDAGGMINPFNGEGIAYAMETGQIAAETIVQALARTTPAQRERVLRAYPQ 353
Query: 377 KWDKTY 382
Y
Sbjct: 354 TLKDAY 359
>gi|258405585|ref|YP_003198327.1| geranylgeranyl reductase [Desulfohalobium retbaense DSM 5692]
gi|257797812|gb|ACV68749.1| geranylgeranyl reductase [Desulfohalobium retbaense DSM 5692]
Length = 384
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 132/324 (40%), Gaps = 48/324 (14%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVG--EFDLPLDIID-R 110
V+GGGP+G AAA+ +A G E L+++ K C G I V E LD
Sbjct: 8 VVGGGPSGCAAAKGIADAGGEVLLLDKAAFPRPKLCAGVITAKTVAVVERVFGLDTASLH 67
Query: 111 KVTKMKMISPSNVAVDIGQTL---KPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK 167
+K +P V + L + +V R D L +RA GA + +
Sbjct: 68 ACGALKAATPRYRVVTRQRVLLEDSAPDPFRLVERRSFDHLLLQRAAAAGARCVTETPVT 127
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS----INAGDYD 223
PR E K GE T + VIGADG +SRV + + A Y
Sbjct: 128 GIDPRRGE------------VKTAAGE--TFQARVVIGADGVHSRVRRHLTPRVQARRY- 172
Query: 224 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDF----YGWVFPKCDHVAVGTGTVTHK 279
+++R+ E + ++L + + + Y W FP+ + + +G + +
Sbjct: 173 ----WRQRLAHCVEIVAPLQDLTHSHTSLGLHLGYVRHGYAWNFPRGEDIILGMCALPCR 228
Query: 280 GDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRP------RRLSGRVALVGDAAGYV 333
G+ + A + LG I V A P HP P + RV L GDAAG
Sbjct: 229 GE-------RLDHAFQEFLG-DIGYVGAAPFKGHPLPYGNFLDTPVQDRVLLTGDAAGLA 280
Query: 334 TKCSGEGIYFAAKSGRMCAEAIIE 357
GEG+YFA +SG + A+A +
Sbjct: 281 DPLLGEGLYFALRSGELAAQAALS 304
>gi|357401053|ref|YP_004912978.1| Electron transfer oxidoreductase [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|386357110|ref|YP_006055356.1| geranylgeranyl reductase [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|337767462|emb|CCB76173.1| Electron transfer oxidoreductase [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|365807618|gb|AEW95834.1| geranylgeranyl reductase [Streptomyces cattleya NRRL 8057 = DSM
46488]
Length = 429
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 164/383 (42%), Gaps = 39/383 (10%)
Query: 47 TNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCG-GAIPLCMVGEFDLP 104
+ R+ V V+G GPAG A LAK G++ L+E+ K CG G P +
Sbjct: 8 SERSADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVQMG 67
Query: 105 LDIIDR----KVTKMKMISPS-NVAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNGA 158
+D+ + + +++I+ + +D + +Y G+VR R+ D L +A+K GA
Sbjct: 68 IDVSEEAGWLRNKGLRIIAGGMRLQLDWPELASFPDY-GLVRKRDDFDEQLARQAQKAGA 126
Query: 159 SVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRT---LEVDAVIGADGANSRVAK 215
L+ + ++ P T G + +GE++T V+ ADG ++R++
Sbjct: 127 R----LYERCNVSAPLTDPRTGRIT---GVEAKLGEEKTPVTFHAPLVVAADGNSTRLSL 179
Query: 216 SINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY---VGDDVSPDFYGWVFPKCDHV 269
++ D +A + P Y E+ E++ G + YGWVF D
Sbjct: 180 AMGLHRREDRPMGVAVRTYFTSPRHDDDYLESWLELWDRRGGQEKLLPGYGWVFGMGDGT 239
Query: 270 A-VGTGTVTHKGDIKKFQLATRNRAKDKILGGKI----------IRVEAHPIPEHPRPRR 318
+ VG G + K+ +A + + IR A P+ + +P
Sbjct: 240 SNVGLGVLNSSPAFKELDWREVLKAWCASMPEEWGYTPENMTCPIRGAALPMAFNRQPHY 299
Query: 319 LSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKW 378
G + LVGDA G V +GEGI +A +SG++ A+ I++ T E L++Y
Sbjct: 300 TRG-LLLVGDAGGLVNPFNGEGIAYAMESGQIAADVIVQAHSRATEAGRELALQRYPRVL 358
Query: 379 DKTYWPTYKVLDVLQKVFYRSNP 401
TY Y + ++ SNP
Sbjct: 359 KDTYGGYYTLGRAFVQLI--SNP 379
>gi|298674747|ref|YP_003726497.1| geranylgeranyl reductase [Methanohalobium evestigatum Z-7303]
gi|298287735|gb|ADI73701.1| geranylgeranyl reductase [Methanohalobium evestigatum Z-7303]
Length = 396
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 134/310 (43%), Gaps = 29/310 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDL-PLDIID 109
V V+G GPAG A+ A NG LIE P C G + V E DL P D
Sbjct: 5 VVVVGAGPAGSIASRYAALNGASVLLIEEHQSIGSPVGCTGLLSTRAVSECDLEPSDDFV 64
Query: 110 RKVTKMKMISPSN---VAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-INGLF 165
K I ++ + +D GQT Y+ V R+ D L + A ++G + +
Sbjct: 65 LNNVKGAFIYSTDGIPLQIDGGQT---KAYV--VSRKTFDRKLAQTAVESGVDILLRTKA 119
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
+ ++ + ++ +VL K GV K+T++ VIGADG S ++K + G+ +
Sbjct: 120 VGIENSSSIQKLHVL--------KEGV--KQTIKAHVVIGADGIRSNISKMVGLGNVEKI 169
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKGDIKK 284
++ + + + K E++ G +P F+ W P ++ +G GT T +K
Sbjct: 170 VSGIQVDGVYESK---NSEFVELFPG-SYAPGFFAWTVPLSKSISRIGLGT-TEPDAVKY 224
Query: 285 F-QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYF 343
L N + G ++ IP + + V +VGDAAG V SG GIY
Sbjct: 225 LNHLIKSNPEISERYQGSMMDFVVGAIPLGTLDKTFTDGVIVVGDAAGQVKPTSGGGIYP 284
Query: 344 AAKSGRMCAE 353
A ++ E
Sbjct: 285 GAVCAKIAGE 294
>gi|443625248|ref|ZP_21109696.1| putative Electron transfer oxidoreductase [Streptomyces
viridochromogenes Tue57]
gi|443341165|gb|ELS55359.1| putative Electron transfer oxidoreductase [Streptomyces
viridochromogenes Tue57]
Length = 434
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 165/378 (43%), Gaps = 46/378 (12%)
Query: 37 VSAAKTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCG-GAIP 94
V+ +SP L+ V V+G GPAG A LAK+G++ L+E+ + K CG G P
Sbjct: 4 VTEPHSSP-LSENTADVIVVGAGPAGSTTAYHLAKSGLDVLLLEKTEFPREKVCGDGLTP 62
Query: 95 LCMVGEFDLPLDIIDR----KVTKMKMISPS-NVAVDIGQTLKPHEYIGMVR-REVLDAY 148
+ + +DI + + +++I + +D +Y G+VR R+ D
Sbjct: 63 RAVKQLVAMGIDISEEAGWLRNKGLRIIGGGVRLQLDWPDLASFPDY-GLVRKRDDFDEQ 121
Query: 149 LRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYT-EYDGTKGGVGEKR---TLEVDAVI 204
L +A+K GA L+ + N P + T G +GE++ T V+
Sbjct: 122 LARQAQKAGAR----LYERC----NVGAPIIDDRTGRITGVHAKLGEEKREVTFHAPLVV 173
Query: 205 GADGANSRVAKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPD 257
ADG ++R++ ++ D +A + P + Y E+ E++ D + P
Sbjct: 174 AADGNSTRLSLAMGLHRREDRPMGVAVRTYFTSPRHEDDYLESWLELWDRRGAEDRLLPG 233
Query: 258 FYGWVFPKCDHVA-VGTGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIR 304
YGW+F D + VG G + K+ +A D + G IR
Sbjct: 234 -YGWIFGMGDGTSNVGLGVLNTSDSFKELDWREVLKAWCASMPEDWGYTPDNMTG--PIR 290
Query: 305 VEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTR 364
A P+ + +P G + LVGDA G V +GEGI +A +SG++ A+ I++ T
Sbjct: 291 GAALPMAFNRQPHYTKG-LLLVGDAGGLVNPFNGEGIAYAMESGQIAADVIVQAHARATP 349
Query: 365 MIDEGDLRKYLEKWDKTY 382
E L++Y + TY
Sbjct: 350 GQRELALQRYPQVLKDTY 367
>gi|218705198|ref|YP_002412717.1| hypothetical protein ECUMN_1989 [Escherichia coli UMN026]
gi|293405197|ref|ZP_06649189.1| oxidoreductase FixC [Escherichia coli FVEC1412]
gi|298380840|ref|ZP_06990439.1| electron transfer flavoprotein-quinone oxidoreductase [Escherichia
coli FVEC1302]
gi|300898518|ref|ZP_07116852.1| FAD dependent oxidoreductase [Escherichia coli MS 198-1]
gi|387607320|ref|YP_006096176.1| putative flavoprotein [Escherichia coli 042]
gi|417586568|ref|ZP_12237340.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli STEC_C165-02]
gi|419932232|ref|ZP_14449560.1| hypothetical protein EC5761_01779 [Escherichia coli 576-1]
gi|422332965|ref|ZP_16413977.1| hypothetical protein HMPREF0986_02471 [Escherichia coli 4_1_47FAA]
gi|432353611|ref|ZP_19596885.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE2]
gi|432401962|ref|ZP_19644715.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE26]
gi|432426135|ref|ZP_19668640.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE181]
gi|432460754|ref|ZP_19702905.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE204]
gi|432475876|ref|ZP_19717876.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE208]
gi|432517765|ref|ZP_19754957.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE228]
gi|432537863|ref|ZP_19774766.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE235]
gi|432631435|ref|ZP_19867364.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE80]
gi|432641081|ref|ZP_19876918.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE83]
gi|432666067|ref|ZP_19901649.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE116]
gi|432770663|ref|ZP_20005007.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE50]
gi|432774789|ref|ZP_20009071.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE54]
gi|432886642|ref|ZP_20100731.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE158]
gi|432912739|ref|ZP_20118549.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE190]
gi|432961717|ref|ZP_20151507.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE202]
gi|433018658|ref|ZP_20206904.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE105]
gi|433053205|ref|ZP_20240400.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE122]
gi|433063091|ref|ZP_20250024.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE125]
gi|433067983|ref|ZP_20254784.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE128]
gi|433158730|ref|ZP_20343578.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE177]
gi|433178343|ref|ZP_20362755.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE82]
gi|218432295|emb|CAR13185.1| putative oxidoreductase subunit with FAD/NAD(P)-binding domain
[Escherichia coli UMN026]
gi|284921620|emb|CBG34692.1| putative flavoprotein [Escherichia coli 042]
gi|291427405|gb|EFF00432.1| oxidoreductase FixC [Escherichia coli FVEC1412]
gi|298278282|gb|EFI19796.1| electron transfer flavoprotein-quinone oxidoreductase [Escherichia
coli FVEC1302]
gi|300357811|gb|EFJ73681.1| FAD dependent oxidoreductase [Escherichia coli MS 198-1]
gi|345338071|gb|EGW70502.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli STEC_C165-02]
gi|373246094|gb|EHP65555.1| hypothetical protein HMPREF0986_02471 [Escherichia coli 4_1_47FAA]
gi|388418308|gb|EIL78121.1| hypothetical protein EC5761_01779 [Escherichia coli 576-1]
gi|430875852|gb|ELB99373.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE2]
gi|430926792|gb|ELC47379.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE26]
gi|430956475|gb|ELC75149.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE181]
gi|430989467|gb|ELD05921.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE204]
gi|431005817|gb|ELD20824.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE208]
gi|431051813|gb|ELD61475.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE228]
gi|431069777|gb|ELD78097.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE235]
gi|431170903|gb|ELE71084.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE80]
gi|431183346|gb|ELE83162.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE83]
gi|431201442|gb|ELF00139.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE116]
gi|431315863|gb|ELG03762.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE50]
gi|431318504|gb|ELG06199.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE54]
gi|431416687|gb|ELG99158.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE158]
gi|431440168|gb|ELH21497.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE190]
gi|431474673|gb|ELH54479.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE202]
gi|431533596|gb|ELI10095.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE105]
gi|431571601|gb|ELI44471.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE122]
gi|431582925|gb|ELI54935.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE125]
gi|431585675|gb|ELI57622.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE128]
gi|431679418|gb|ELJ45330.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE177]
gi|431704707|gb|ELJ69332.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE82]
Length = 429
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 148/349 (42%), Gaps = 47/349 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDVLEANVVILADGVNSMLGR 168
Query: 216 S---INAGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S ++A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVSASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGYVTKC--SGEGIYFAAKSGRMCAEAIIEGSE 360
P+ ++ V +VGDAAG+ + G+ A S + A +I E
Sbjct: 288 MVPQLVNDGVMIVGDAAGFCLNLGFTVRGMDLAIASAQATATTVIAAKE 336
>gi|432718814|ref|ZP_19953783.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE9]
gi|431262626|gb|ELF54615.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE9]
Length = 429
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 148/349 (42%), Gaps = 47/349 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDVLEANVVILADGVNSMLGR 168
Query: 216 S---INAGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S ++A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVSASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGYVTKC--SGEGIYFAAKSGRMCAEAIIEGSE 360
P+ ++ V +VGDAAG+ + G+ A S + A +I E
Sbjct: 288 MVPQLVNDGVMIVGDAAGFCLNLGFTVRGMDLAIASAQATATTVIAAKE 336
>gi|320354006|ref|YP_004195345.1| fumarate reductase/succinate dehydrogenase flavoprotein
domain-containing protein [Desulfobulbus propionicus DSM
2032]
gi|320122508|gb|ADW18054.1| fumarate reductase/succinate dehydrogenase flavoprotein domain
protein [Desulfobulbus propionicus DSM 2032]
Length = 342
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 138/326 (42%), Gaps = 51/326 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLDIIDRK 111
+ ++GGGP G A A LA++G L+ERK + K C G I + +P ++I+R+
Sbjct: 6 ILIVGGGPGGLACATQLARHGARVVLVERKPVFGPKVCAGGITWHGLLR-HVPHELIERQ 64
Query: 112 VTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLP 171
+ +++P V Q + I V RE L ++ +A G ++++G + P
Sbjct: 65 FPEQVVVTPRQQVVVAEQ----NPIIATVSRERLGQWMAAQAAAAGVTLLSGTRLAALEP 120
Query: 172 RNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQER 231
E ++ GV ++GADG+ S+V + +N + I
Sbjct: 121 GQ-------AILERGNSRMGV------RYGQLVGADGSCSQVRRYLNLPSFALGIGLNAM 167
Query: 232 VKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRN 291
V +M E ++ + YGW+FP ++G D + F T
Sbjct: 168 VPGHFSRM-------EWHLDPRLFGSGYGWIFPHATTCSIGA-----YADSRLFSART-- 213
Query: 292 RAKDKILGGKIIRVEAHPIPEHPRPRRLSGRV------------ALVGDAAGYVTKCSGE 339
K+++L + I P R +G V LVGDAAG + +GE
Sbjct: 214 -LKEQLL----VWAGRQGIALDPGAIR-AGLVNFDYRGVCFEHGWLVGDAAGLASGLTGE 267
Query: 340 GIYFAAKSGRMCAEAIIEGSENGTRM 365
GIY A SGR+ A I++ + GT +
Sbjct: 268 GIYPALVSGRVVARMILDPAYPGTEL 293
>gi|91772363|ref|YP_565055.1| geranylgeranyl reductase [Methanococcoides burtonii DSM 6242]
gi|91711378|gb|ABE51305.1| Oxidoreductase with FAD-binding domain [Methanococcoides burtonii
DSM 6242]
Length = 396
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 163/400 (40%), Gaps = 67/400 (16%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIP-LCMVGEF-------- 101
+ ++G GPAG AA AK G LIE+K D P CGG +P L + E
Sbjct: 9 IIIVGAGPAGSTAAAYAAKAGASVLLIEKKKDIGLPLQCGGFLPHLDTLQELVPNAQLPY 68
Query: 102 ---DLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGA 158
D+P D I + + I+P+ G + + + R D YL + A + GA
Sbjct: 69 LLEDIPADCIHTTSSVQRFIAPN------GYSKEFEVDADAIDRRRFDKYLAKEAGRCGA 122
Query: 159 SVINGLFMKMDLPRNFEQPYVLYYTEYDGTK---GGVGEKRTLEVDAVIGADGANSRVAK 215
V+ G + E +GT GV ++ +IGADG NS V +
Sbjct: 123 DVMIGTNV----------------LEVNGTSVDVDGVFGTHSISGKVLIGADGPNSTVGR 166
Query: 216 SIN-AGDYD---YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPK-CDHVA 270
+ D+D AF+ V D EMY G D P Y W+ + D
Sbjct: 167 AKGLVRDHDPMGTGTAFEYEVSCVDID----REAVEMYFGKDYVPGGYAWIISQGGDTAN 222
Query: 271 VGTGT--------VTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR 322
+G G ++ + +++F + A K+ G II V + +P P+ + +
Sbjct: 223 IGVGIREVLFRNGLSARDYLERF-MYEHPIASRKLDGASIISVVSGLVPVGGAPKVTATK 281
Query: 323 VALV-GDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKT 381
LV GDAAG++ +G GI A G++ + E E L+ Y E+W +
Sbjct: 282 DTLVAGDAAGHIIATNGGGISTAMVGGKIAGQTAAEFLEGKCA------LQDYEERWRRE 335
Query: 382 YWPTYKVLDVLQKV---FYRSNPAREAFVEMCADEYVQKM 418
K ++K+ RS+ A ++M E+++ M
Sbjct: 336 MGLEIKTAVYVRKLMDNLMRSDSMMSAAIKMIDPEHMKAM 375
>gi|408381811|ref|ZP_11179359.1| geranylgeranyl reductase [Methanobacterium formicicum DSM 3637]
gi|407815742|gb|EKF86312.1| geranylgeranyl reductase [Methanobacterium formicicum DSM 3637]
Length = 392
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 155/355 (43%), Gaps = 34/355 (9%)
Query: 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLD 106
+N VAV+G GP G A +A+ G E ++E+K + P C G + + LP +
Sbjct: 2 KNYDVAVVGAGPVGSTFARHMAEKGFEVAILEKKREIGVPLQCAGLLGKKIKKINILPDE 61
Query: 107 IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFM 166
I V + SP + + + + KP Y+ V R D +L + A +GA LF+
Sbjct: 62 FIINPVNGAFLHSPEDTVLSVSKE-KPEAYV--VDRIGYDKFLAQLAIDSGAE----LFL 114
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAI 226
+ V+ + TK + D V+GADG +S V+++ N +
Sbjct: 115 NHRVETVDSVNGVITLKNNENTK--------ISADVVVGADGHSSVVSEAFNPHVESFQA 166
Query: 227 AFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VG--TGTVTHKGDIK 283
A Q + + ++ + ++ +YV VSP F W P + A VG + H+ +
Sbjct: 167 A-QYLIDVGAKR--FQKDYVHLYVDSRVSPGFL-WAIPLSESTARVGLFSDVNYHQSTVI 222
Query: 284 KFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVTKCSGEGIY 342
+L + + ++ G I++ IP++ ++L +V L+GDAA V +G G+
Sbjct: 223 LNELLAK---RSELKGATILKKYYGVIPKYNSQKQLVKDKVILLGDAASQVKPTTGGGLI 279
Query: 343 FAAKSGRMCAEAIIEGSEN-GTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVF 396
+ ++++ EN T M L Y + + + KV ++ ++F
Sbjct: 280 MGFSCAEIASQSVTTALENENTEM-----LMNYYKDYQNQFKNELKVQLMVHRIF 329
>gi|297201620|ref|ZP_06919017.1| electron transfer oxidoreductase [Streptomyces sviceus ATCC 29083]
gi|197711009|gb|EDY55043.1| electron transfer oxidoreductase [Streptomyces sviceus ATCC 29083]
Length = 428
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 159/369 (43%), Gaps = 44/369 (11%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVGEFDL 103
L+ V V+G GPAG A LAK+G++ L+E+ + K CG G P +
Sbjct: 5 LSENTADVIVVGAGPAGSTTAYHLAKSGLDVLLLEKTEFPREKVCGDGLTPRATKQLVAM 64
Query: 104 PLDIIDR----KVTKMKMISPS-NVAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNG 157
+DI + + +++I + +D + +Y G+VR R+ D L +A+K G
Sbjct: 65 GIDISEEAGWLRNKGLRIIGGGVRLQLDWPELASFPDY-GLVRKRDDFDEQLARQAQKAG 123
Query: 158 ASVINGLFMKMDLPRNFEQPYVLYYT-EYDGTKGGVGEKR---TLEVDAVIGADGANSRV 213
A + N P V T G +GE++ T V+ ADG ++R+
Sbjct: 124 ARLYERC--------NVGAPIVDDRTGRITGVHAKLGEEKREVTFHAPLVVAADGNSTRL 175
Query: 214 AKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDFYGWVFPKC 266
+ ++ D +A + + P + Y E+ E++ G+D YGW+F
Sbjct: 176 SLAMGLHRREDRPMGVAVRTYFESPRHEDDYLESWLELWDRRGPGEDRLLPGYGWIFGMG 235
Query: 267 DHVA-VGTGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIRVEAHPIPEH 313
D + VG G + K+ +A + + G IR A P+ +
Sbjct: 236 DGTSNVGLGVLNTSDSFKELDWREVLKAWCASMPEDWGYTPENMTG--PIRGAALPMAFN 293
Query: 314 PRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRK 373
+P G + LVGDA G V +GEGI +A +SG++ A+ I++ T E L++
Sbjct: 294 RQPHYTKG-LLLVGDAGGMVNPFNGEGIAYAMESGQIAADVIVQAHARATPAQREIALQR 352
Query: 374 YLEKWDKTY 382
Y + TY
Sbjct: 353 YPQVLKDTY 361
>gi|452211010|ref|YP_007491124.1| Digeranylgeranylglycerophospholipid reductase [Methanosarcina mazei
Tuc01]
gi|209572890|sp|Q8PU50.2|GGR_METMA RecName: Full=Digeranylgeranylglycerophospholipid reductase;
Short=DGGGPL reductase; AltName:
Full=2,3-di-O-geranylgeranylglyceryl phosphate
reductase; AltName: Full=Geranylgeranyl reductase;
Short=GGR
gi|452100912|gb|AGF97852.1| Digeranylgeranylglycerophospholipid reductase [Methanosarcina mazei
Tuc01]
Length = 407
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 138/328 (42%), Gaps = 37/328 (11%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CG-GAIPLCMVGEFDLPLDIID 109
V VIG GPAG AA+T A+ G++ LIE++ + P C G C+ ++ I
Sbjct: 7 VLVIGAGPAGSIAAKTAAEKGLDVLLIEKRQEIGDPVRCAEGVNKECLKKHVEIDKRWIC 66
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----INGL 164
+ + SP +++ + + E ++ R+V D L E A GA V GL
Sbjct: 67 ADLKGSCIFSPDGTKIEMAEEISGGEVGYVLERKVFDRALAEHAATAGAEVRVKTRATGL 126
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK--SINAG-- 220
++ D + + +G++ + VIGADG S+V + I+
Sbjct: 127 IIEDDFVKGARLMH-------------LGKEYEVRASIVIGADGVESKVGRWAGIDTALK 173
Query: 221 DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHK 279
D Q + D Y E Y+G++++P Y WVFPK A VG G + K
Sbjct: 174 PVDVETCAQYLIAGADINQEY----CEFYIGNEMAPGGYVWVFPKGGGKANVGIGILGSK 229
Query: 280 GDIKKFQLATRNRAKD----KILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVT 334
+ KF+ + D K +I+ + +P + S + LVGDAA
Sbjct: 230 --MGKFKPRPVDYLNDFVQKKFPDARIVEMVFGGVPVSGSIEKTSVNGLMLVGDAARQSD 287
Query: 335 KCSGEGIYFAAKSGRMCAEAIIEGSENG 362
+G GI A +G++ EA E G
Sbjct: 288 PITGGGILNAMDAGKLAGEAAYEAISAG 315
>gi|418466490|ref|ZP_13037410.1| electron transfer oxidoreductase [Streptomyces coelicoflavus
ZG0656]
gi|371552911|gb|EHN80139.1| electron transfer oxidoreductase [Streptomyces coelicoflavus
ZG0656]
Length = 430
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 163/380 (42%), Gaps = 46/380 (12%)
Query: 41 KTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCG-GAIPLCMV 98
+T P L+ V V+G GPAG A LA++G++ L+E+ K CG G P +
Sbjct: 4 ETEP-LSENTADVIVVGAGPAGSTTAYHLARSGLDVLLLEKTAFPREKVCGDGLTPRAVK 62
Query: 99 GEFDLPLDIIDR----KVTKMKMISP-SNVAVDIGQTLKPHEYIGMVR-REVLDAYLRER 152
+ +DI + + +++I S + +D +Y G+VR R+ D L +
Sbjct: 63 QLVAMGIDISEEAGWLRNKGLRIIGGGSRLQLDWPDLASFPDY-GLVRKRDDFDEQLARQ 121
Query: 153 AEKNGASVINGLFMKMDLPRNFEQPYVLYYT-EYDGTKGGVGEKR---TLEVDAVIGADG 208
A+K GA L+ + N P V T G K +GE + T V+ ADG
Sbjct: 122 AQKAGAR----LYERC----NVGAPIVDDRTGRITGVKAKLGEDKREVTFHAPLVVAADG 173
Query: 209 ANSRVAKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDFYGW 261
++R++ ++ D +A + P Y E+ E++ D + P YGW
Sbjct: 174 NSTRLSLAMGLHRREDRPMGVAVRTYFTSPRHDDDYLESWLELWDRRGAQDRLLPG-YGW 232
Query: 262 VFPKCDHVA-VGTGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIRVEAH 308
VF D + VG G + K+ +A D + G IR A
Sbjct: 233 VFGMGDGTSNVGLGVLNTSAAFKELDWREILKAWCASMPEDWGYTPDNMTG--PIRGAAL 290
Query: 309 PIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDE 368
P+ + +P G + LVGDA G V +GEGI +A +SG++ A+ +++ T E
Sbjct: 291 PMAFNRQPHYTKG-LLLVGDAGGLVNPFNGEGIAYAMESGQIAADVVVQAHARATPAQRE 349
Query: 369 GDLRKYLEKWDKTYWPTYKV 388
L++Y TY Y +
Sbjct: 350 IALQRYPRVLKDTYGGYYNL 369
>gi|21228601|ref|NP_634523.1| geranylgeranyl reductase [Methanosarcina mazei Go1]
gi|20907096|gb|AAM32195.1| Geranylgeranyl reductase [Methanosarcina mazei Go1]
Length = 417
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 138/328 (42%), Gaps = 37/328 (11%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CG-GAIPLCMVGEFDLPLDIID 109
V VIG GPAG AA+T A+ G++ LIE++ + P C G C+ ++ I
Sbjct: 17 VLVIGAGPAGSIAAKTAAEKGLDVLLIEKRQEIGDPVRCAEGVNKECLKKHVEIDKRWIC 76
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----INGL 164
+ + SP +++ + + E ++ R+V D L E A GA V GL
Sbjct: 77 ADLKGSCIFSPDGTKIEMAEEISGGEVGYVLERKVFDRALAEHAATAGAEVRVKTRATGL 136
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK--SINAG-- 220
++ D + + +G++ + VIGADG S+V + I+
Sbjct: 137 IIEDDFVKGARLMH-------------LGKEYEVRASIVIGADGVESKVGRWAGIDTALK 183
Query: 221 DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHK 279
D Q + D Y E Y+G++++P Y WVFPK A VG G + K
Sbjct: 184 PVDVETCAQYLIAGADINQEY----CEFYIGNEMAPGGYVWVFPKGGGKANVGIGILGSK 239
Query: 280 GDIKKFQLATRNRAKD----KILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVT 334
+ KF+ + D K +I+ + +P + S + LVGDAA
Sbjct: 240 --MGKFKPRPVDYLNDFVQKKFPDARIVEMVFGGVPVSGSIEKTSVNGLMLVGDAARQSD 297
Query: 335 KCSGEGIYFAAKSGRMCAEAIIEGSENG 362
+G GI A +G++ EA E G
Sbjct: 298 PITGGGILNAMDAGKLAGEAAYEAISAG 325
>gi|408827346|ref|ZP_11212236.1| geranylgeranyl reductase [Streptomyces somaliensis DSM 40738]
Length = 428
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 152/370 (41%), Gaps = 46/370 (12%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCG-GAIPLCMVGEFDL 103
L+ V V+G GPAG A LAK G++ L+E+ K CG G P +
Sbjct: 5 LSEHTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVAM 64
Query: 104 PLDIIDR----KVTKMKMISPS-NVAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNG 157
+D+ + + +++I + +D + +Y G+VR R+ D L +A+K G
Sbjct: 65 GIDVSEEAGWSRNKGLRIIGGGVRLQLDWPELATYPDY-GLVRKRDDFDELLARQAQKAG 123
Query: 158 ASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKR---TLEVDAVIGADGANSRVA 214
A L+ + ++ P T G + +GE+R T V+ ADG +SR++
Sbjct: 124 AR----LYERCNVGEPVTDPRTGRIT---GVRAKLGEERTPVTFRAPLVVAADGNSSRLS 176
Query: 215 KSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPD----FYGWVFPKCD 267
++ D +A + P Y E+ E++ PD YGW+F D
Sbjct: 177 LAMGLHRREDRPMGVAVRTYFTTPRHDDDYLESWLELWDRRGPGPDRLLPGYGWIFGMGD 236
Query: 268 HVA-VGTGTVTHKGDIKKFQLATRNRAKDKILGGKI--------------IRVEAHPIPE 312
+ VG G + ++ R K + IR A P+
Sbjct: 237 GTSNVGLGILNSSSAFRELDW----REVLKAWCASVPEDWGFTPENMTTPIRGAALPMAF 292
Query: 313 HPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLR 372
+ +P G + LVGDA G V +GEGI +A +SG++ A+ I++ T E L
Sbjct: 293 NRKPHYTRG-LLLVGDAGGMVNPFNGEGIAYAMESGQLAADVIVQAHARSTDARREQALH 351
Query: 373 KYLEKWDKTY 382
Y + Y
Sbjct: 352 AYPQALKDAY 361
>gi|395771870|ref|ZP_10452385.1| electron transfer oxidoreductase [Streptomyces acidiscabies 84-104]
Length = 437
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 163/373 (43%), Gaps = 44/373 (11%)
Query: 41 KTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMV 98
T+P L+ V V+G GPAG A LAK G++ L+E+ + K CG G P
Sbjct: 11 NTAP-LSGNTADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTEFPREKVCGDGLTPRATK 69
Query: 99 GEFDLPLDIIDR----KVTKMKMISPS-NVAVDIGQTLKPHEYIGMVR-REVLDAYLRER 152
+ +DI + + +++I + +D + +Y G+VR R+ D L +
Sbjct: 70 QLVAMGIDISEEAGWLRNKGLRIIGGGVRLQLDWPELASYPDY-GLVRKRDDFDEQLARQ 128
Query: 153 AEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKR---TLEVDAVIGADGA 209
A+K GA L+ + ++ T G +GE++ T V+ ADG
Sbjct: 129 AQKAGAR----LYERCNVGAPIRDDRTGRIT---GVHAKLGEEKREVTFHAPLVVAADGN 181
Query: 210 NSRVAKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDFYGWV 262
++R++ ++ D +A + + P + Y E+ E++ D + P YGW+
Sbjct: 182 STRLSLAMGLHRREDRPMGVAVRTYFESPRHEDDYLESWLELWDRRGAEDRLLPG-YGWI 240
Query: 263 FPKCDHVA-VGTGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIRVEAHP 309
F D + VG G + G K+ +A + + G IR A P
Sbjct: 241 FGMGDGTSNVGLGVLNTSGSFKELDWREVLKAWCASMPEEWGYTPEHMTG--PIRGAALP 298
Query: 310 IPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEG 369
+ + +P G + LVGDA G V +GEGI +A +SG++ A+ I++ T E
Sbjct: 299 MAFNRQPHYTKG-LLLVGDAGGLVNPFNGEGIAYAMESGQIAADVIVQAHARATPAQREI 357
Query: 370 DLRKYLEKWDKTY 382
L++Y + TY
Sbjct: 358 ALQRYPQVLKDTY 370
>gi|398784851|ref|ZP_10547982.1| geranylgeranyl reductase [Streptomyces auratus AGR0001]
gi|396994900|gb|EJJ05926.1| geranylgeranyl reductase [Streptomyces auratus AGR0001]
Length = 437
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 160/368 (43%), Gaps = 45/368 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCG-GAIPLCMVGEFDLPLDIIDR 110
V V+G GPAG A A LAK+G++ L+E+ K CG G P + +DI +
Sbjct: 22 VIVVGAGPAGSATAYHLAKSGLDVLLLEKTAFPREKVCGDGLTPRATKQLVAMGIDISEE 81
Query: 111 ----KVTKMKMISP-SNVAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNGASVINGL 164
+ +++I S + +D + +Y G+VR R+ D L +A+K GA L
Sbjct: 82 AGWLRNKGLRIIGGGSRLQLDWPELASYPDY-GLVRKRDDFDEQLARQAQKAGAR----L 136
Query: 165 FMKMDLPRNFEQPYVLYYTEY-DGTKGGVGEKRT---LEVDAVIGADGANSRVAKSINAG 220
+ + N P V T + G +G+++T V+ ADG ++R++ ++
Sbjct: 137 YERC----NVGAPIVHELTGHITGVHAKLGDEKTPVTFHAPLVVAADGNSTRLSLAMGLH 192
Query: 221 ---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDFYGWVFPKCDHVA-VG 272
D +A + P Y E+ E++ D + P YGW+F D + VG
Sbjct: 193 RREDRPMGVAVRTYFTSPRHDDDYLESWLELWDRRGAQDRLLPG-YGWIFGMGDGTSNVG 251
Query: 273 TGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIRVEAHPIPEHPRPRRLS 320
G + ++ +A + + G IR A P+ + +P
Sbjct: 252 LGILNSSSAFRELDWREILKAWCASMPEDWGYTPENMTG--PIRGAALPMAFNRQPHYTK 309
Query: 321 GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDK 380
G + LVGDA G V +GEGI +A +SG + AE I++ T E L++Y +
Sbjct: 310 G-LLLVGDAGGLVNPFNGEGIAYAMESGAIAAEVIVQAHARATYAQRELALQRYPKILKD 368
Query: 381 TYWPTYKV 388
TY Y +
Sbjct: 369 TYGGYYSL 376
>gi|290958262|ref|YP_003489444.1| oxidoreductase [Streptomyces scabiei 87.22]
gi|260647788|emb|CBG70893.1| putative oxidoreductase [Streptomyces scabiei 87.22]
Length = 430
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 168/410 (40%), Gaps = 59/410 (14%)
Query: 42 TSPK-LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMV 98
T P+ LT V V+G GPAG A LAK G++ L+E+ K CG G P
Sbjct: 2 TEPQPLTEHTADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTSFPREKVCGDGLTPRATK 61
Query: 99 GEFDLPLDIIDR----KVTKMKMISPS-NVAVDIGQTLKPHEYIGMVR-REVLDAYLRER 152
+ +DI + + +++I + +D +Y G+VR R+ D L +
Sbjct: 62 QLVSMGIDISEEAGWLRNKGLRIIGGGVRLQLDWPDLASYPDY-GLVRKRDDFDEQLARQ 120
Query: 153 AEKNGASVINGLFMKMDLPRNFEQPYVLYYT-EYDGTKGGVGEKR---TLEVDAVIGADG 208
A+K GA + N P + T G +GE++ T V+ ADG
Sbjct: 121 AQKAGARLYERC--------NVGAPVIDDRTGRITGVHAKLGEEKREVTFHAPLVVAADG 172
Query: 209 ANSRVAKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDFYGW 261
++R++ ++ D +A + P Y E+ E++ G+D YGW
Sbjct: 173 NSTRLSLAMGLHRREDRPMGVAVRTYFTSPRHDDDYLESWLELWDKRGPGEDRLLPGYGW 232
Query: 262 VFPKCDHVA-VGTGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIRVEAH 308
+F D + VG G + K+ +A D + G IR A
Sbjct: 233 IFGMGDGTSNVGLGVLNTSAAFKELDWRDVLKAWCASMPEEWGYTPDNMTG--PIRGAAL 290
Query: 309 PIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDE 368
P+ + +P G + LVGDA G V +GEGI +A +SG++ A+ I++ T E
Sbjct: 291 PMAFNRQPHYTKG-LLLVGDAGGMVNPFNGEGIAYAMESGQIAADVIVQAHARATPGQRE 349
Query: 369 GDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKM 418
L++Y + VL+ F AFV++ + + K+
Sbjct: 350 LALQRYPQ--------------VLKDTFGGYYTMGRAFVKLIGNPKIMKL 385
>gi|453049050|gb|EME96680.1| geranylgeranyl reductase [Streptomyces mobaraensis NBRC 13819 = DSM
40847]
Length = 427
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 155/362 (42%), Gaps = 45/362 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCG-GAIPLCMVGEFDLPLDIIDR 110
V V+G GPAG A A LA+ G++ L+E+ K CG G P + +DI +
Sbjct: 12 VIVVGAGPAGSATAYHLARTGLDVLLLEKTAFPREKVCGDGLTPRATKQLIAMGIDISEE 71
Query: 111 ----KVTKMKMISPSN-VAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNGASVINGL 164
+ +++I+ N + +D +Y G+VR R+ D L +A K GA +
Sbjct: 72 AGWLRNKGLRIIAGGNRLQLDWPDLASFPDY-GLVRKRDDFDEQLARQAVKAGARLYERC 130
Query: 165 FMKMDLPRNFEQPYVLYYT-EYDGTKGGVGEKR---TLEVDAVIGADGANSRVAKSINA- 219
N P + T G + +GE++ T V+ ADG ++R++ ++
Sbjct: 131 --------NVGAPILDERTGRVTGVEAKLGEEKAPVTFHAPLVVAADGNSTRLSVALGLH 182
Query: 220 --GDYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDFYGWVFPKCDHVA-VG 272
D +A + P Y E+ E++ D + P YGW+F D + VG
Sbjct: 183 RRDDRPMGVAVRTYFTSPRHDDDYLESWLELWDRRGAEDRLLPG-YGWIFGMGDGTSNVG 241
Query: 273 TGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIRVEAHPIPEHPRPRRLS 320
G + K+ +A + + G IR A P+ + +P
Sbjct: 242 LGVLNTSASFKELDWREVLKAWCASMPEEWGYTPENMTG--PIRGAALPMAFNRQPHYTR 299
Query: 321 GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDK 380
G + LVGDA G V +GEGI +A +SG++ AE I++ T E LR+Y +
Sbjct: 300 G-LLLVGDAGGLVNPFNGEGIAYAMESGQIAAEVIVQALGRATPEQRELALRRYPKVLKD 358
Query: 381 TY 382
TY
Sbjct: 359 TY 360
>gi|359146185|ref|ZP_09179816.1| FAD-dependent oxidoreductase [Streptomyces sp. S4]
gi|421740956|ref|ZP_16179184.1| geranylgeranyl reductase family protein [Streptomyces sp. SM8]
gi|406690643|gb|EKC94436.1| geranylgeranyl reductase family protein [Streptomyces sp. SM8]
Length = 428
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 171/414 (41%), Gaps = 56/414 (13%)
Query: 47 TNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCG-GAIPLCMVGEFDLP 104
T + V V+G GPAG A LAK G++ L+E+ K CG G P +
Sbjct: 6 TEQTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVAMG 65
Query: 105 LDIIDR----KVTKMKMISPSN-VAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNGA 158
+DI + + +++I + + +D +Y G+VR R+ D L +A+K GA
Sbjct: 66 IDISEEAGWLRNKGLRIIGGGHRLQLDWPDLASFPDY-GLVRKRDDFDEQLARQAQKAGA 124
Query: 159 SVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRT---LEVDAVIGADGANSRVAK 215
L + ++ P T G + +GE++T V+ ADG ++R++
Sbjct: 125 R----LHERCNVGAPITDPRTGRIT---GVEAKLGEEKTPVTFHAPLVVAADGNSTRLSL 177
Query: 216 SINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPD----FYGWVFPKCDH 268
++ D +A + P Y E+ E++ PD YGWVF D
Sbjct: 178 AMGLHRREDRPMGVAVRTYFTSPRHDDDYLESWLELWDKRGPGPDRLLPGYGWVFGMGDG 237
Query: 269 VA-VGTGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIRVEAHPIPEHPR 315
+ VG G + K+ +A ++ + G IR A P+ + +
Sbjct: 238 TSNVGLGVLNTSASFKELDWREVLKAWTASMPEEWGYTEENMTG--PIRGAALPMAFNRQ 295
Query: 316 PRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYL 375
P G + LVGDA G V +GEGI +A +SG++ A+ I++ T E L Y
Sbjct: 296 PHYTKG-LLLVGDAGGLVNPFNGEGIAYAMESGQIAADVIVQAHARSTPAQRERALLGYP 354
Query: 376 EKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVV 429
+ +TY Y + AFV++ + V K+ + L V+
Sbjct: 355 KVLKETYGGYYSL--------------GRAFVKLIGNPKVMKLATERGLTHPVL 394
>gi|291452009|ref|ZP_06591399.1| electron transfer oxidoreductase [Streptomyces albus J1074]
gi|291354958|gb|EFE81860.1| electron transfer oxidoreductase [Streptomyces albus J1074]
Length = 428
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 171/414 (41%), Gaps = 56/414 (13%)
Query: 47 TNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCG-GAIPLCMVGEFDLP 104
T + V V+G GPAG A LAK G++ L+E+ K CG G P +
Sbjct: 6 TEQTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVAMG 65
Query: 105 LDIIDR----KVTKMKMISPSN-VAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNGA 158
+DI + + +++I + + +D +Y G+VR R+ D L +A+K GA
Sbjct: 66 IDISEEAGWLRNKGLRIIGGGHRLQLDWPDLASFPDY-GLVRKRDDFDEQLARQAQKAGA 124
Query: 159 SVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRT---LEVDAVIGADGANSRVAK 215
L + ++ P T G + +GE++T V+ ADG ++R++
Sbjct: 125 R----LHERCNVGAPITDPRTGRIT---GVEAKLGEEKTPVTFHAPLVVAADGNSTRLSL 177
Query: 216 SINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPD----FYGWVFPKCDH 268
++ D +A + P Y E+ E++ PD YGWVF D
Sbjct: 178 AMGLHRREDRPMGVAVRTYFTSPRHDDDYLESWLELWDKRGPGPDRLLPGYGWVFGMGDG 237
Query: 269 VA-VGTGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIRVEAHPIPEHPR 315
+ VG G + K+ +A ++ + G IR A P+ + +
Sbjct: 238 TSNVGLGVLNTSASFKELDWREVLKAWCASMPEEWGYTEENMTG--PIRGAALPMAFNRQ 295
Query: 316 PRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYL 375
P G + LVGDA G V +GEGI +A +SG++ A+ I++ T E L Y
Sbjct: 296 PHYTKG-LLLVGDAGGLVNPFNGEGIAYAMESGQIAADVIVQAHARSTPAQRERALLGYP 354
Query: 376 EKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVV 429
+ +TY Y + AFV++ + V K+ + L V+
Sbjct: 355 KVLKETYGGYYSL--------------GRAFVKLIGNPKVMKLATERGLTHPVL 394
>gi|23004754|ref|ZP_00047925.1| hypothetical protein Magn03000692 [Magnetospirillum magnetotacticum
MS-1]
Length = 127
Score = 73.2 bits (178), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 4/125 (3%)
Query: 325 LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWP 384
L GDAAG V SGEGIY+A GR+ AEA G ++++ + +W
Sbjct: 3 LAGDAAGVVAPASGEGIYYAMLGGRLAAEAAEAFLATGDARSLALARKRFMRLHGRVFW- 61
Query: 385 TYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTI 444
VL ++Q V+YRS+ RE FV +C D+ VQ++T+D+Y+ K +V P ++ +
Sbjct: 62 ---VLGMMQWVWYRSDGLRERFVSICKDKDVQQLTWDAYMNKELVRAKPAAHARIFFKDL 118
Query: 445 GSLVR 449
L R
Sbjct: 119 AHLFR 123
>gi|443477426|ref|ZP_21067274.1| geranylgeranyl reductase [Pseudanabaena biceps PCC 7429]
gi|443017447|gb|ELS31886.1| geranylgeranyl reductase [Pseudanabaena biceps PCC 7429]
Length = 375
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 137/322 (42%), Gaps = 59/322 (18%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLD-IIDRKV 112
V+G GP+GG+A+ LAK G L+E++ L KPCGG + + FD + V
Sbjct: 6 VVGAGPSGGSASYHLAKRGRSVLLLEKESLPRYKPCGGGVSPMVQEWFDFDFSPAVSLTV 65
Query: 113 TKMK----MISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----ING 163
+ ++ M P V L E + MVRR+V D YL ++A+K G + + G
Sbjct: 66 SNIRYTWQMGDPELV------ELTSKEPVWMVRRDVFDHYLVQQAQKLGVELRDRTGVTG 119
Query: 164 LFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYD 223
L K D L T E+ E VI ADGA +AK +
Sbjct: 120 LEWKSD--------RWLVKT----------EQEVFEARYVIAADGAKGSMAKWLG----- 156
Query: 224 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSP---DF------YGWVFPKCDHVAVGTG 274
F+ER + +M + + DVS DF Y W FPK D ++G G
Sbjct: 157 ----FKERKR----RMGAALEVEAPHSSPDVSAAHFDFGSVQNGYIWNFPKADGYSIGAG 208
Query: 275 TVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALV-GDAAGYV 333
T G+ + + A++ + ++ HPI + L + AL+ G++A V
Sbjct: 209 TFI-GGEKQNLKEIAARYAQEFGIDVTSMKQFGHPICLWDGNQPLHTQNALLTGESACIV 267
Query: 334 TKCSGEGIYFAAKSGRMCAEAI 355
+ EGI + +G + +AI
Sbjct: 268 DPFTAEGIRPSLLTGMLAGQAI 289
>gi|209572882|sp|O27753.2|GGR2_METTH RecName: Full=Digeranylgeranylglycerophospholipid reductase 2;
Short=DGGGPL reductase 2; AltName:
Full=2,3-di-O-geranylgeranylglyceryl phosphate reductase
2; AltName: Full=Geranylgeranyl reductase 2; Short=GGR 2
Length = 385
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 142/340 (41%), Gaps = 33/340 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDL-PLDIID 109
V VIGG AG AA A+ G+ L+ER + P C G + L PL
Sbjct: 5 VVVIGGRVAGSTAAYHAARLGLSVLLLERNPEIGTPVQCAGGVSDSFFKSTGLKPLPEFT 64
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
+ ++ A + + YI + R+ LD YL RA + GA V+ + + D
Sbjct: 65 CTRIRAAAVNGPLGARIVTENPVVRGYI--LERKSLDKYLALRAAEAGADVLT-MSIAGD 121
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK------SINAGDYD 223
L + + DG + +E VI ADG S +A+ D
Sbjct: 122 LIFREGSVSGVVFRGPDGVQ-------EVECGMVIAADGVQSSIARKAGLETGFRPADLC 174
Query: 224 YAIAFQ-ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKGD 281
+ ++ V + E M E Y G +P Y WVFPK + A VG G + K
Sbjct: 175 SCVQYEVAGVDVDPETM-------EFYFGSRFAPSGYLWVFPKGEGRANVGLG-IRRKSC 226
Query: 282 IKKFQLATRNRAKDKILGGKIIRVEAHPIPE-HPRPRRLSGRVALVGDAAGYVTKCSGEG 340
++ L+ NR ++ G K I A +P P R + + +VGDAAG V +G G
Sbjct: 227 SERGPLSYLNRFMEE-RGFKRIEFNAGAVPVCGPIERTFTDGLLVVGDAAGQVDPLTGGG 285
Query: 341 IYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDK 380
I+ AA+ ++ E E E+G +D L +Y +W K
Sbjct: 286 IHLAAECAKIAGEVAAEAIESGR--VDGRFLSRYEMRWRK 323
>gi|282163174|ref|YP_003355559.1| geranylgeranyl reductase [Methanocella paludicola SANAE]
gi|282155488|dbj|BAI60576.1| geranylgeranyl reductase [Methanocella paludicola SANAE]
Length = 392
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 169/411 (41%), Gaps = 45/411 (10%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLP-LD 106
N V V+G GPAG AA T A+ G++ LIE++ + P C + +F P
Sbjct: 4 NYDVIVVGAGPAGSIAARTAAEQGLDVLLIEKRQEIGDPVRCAEGTGKMGLSQFIEPDPR 63
Query: 107 IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFM 166
I +VT ++ +P +++ + L E ++ R++ D + + A + GA V +
Sbjct: 64 WICAEVTGARIFAPDGTCIELNEKLAGKEVGYVLERKIFDRAVAKTAARAGAEV----QV 119
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGG-VGEKRTLEVDAVIGADGANSRVAK--SINAGDYD 223
K ++ V+ G KG GE V+GADG S+V K IN
Sbjct: 120 KTQATSLIKENGVVC-----GIKGKHRGEDFEARAKVVVGADGIESKVGKWAGINTTLKP 174
Query: 224 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKGDI 282
I + + D + + + Y+G+ +P Y W+FPK A VG G + +
Sbjct: 175 KDIETCAQFLVTD--IDIRADSCDFYMGNLRAPGGYVWIFPKGKREANVGLGMLGSRFTG 232
Query: 283 KKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGI 341
K K GKII +P ++LS + LVGDA +G GI
Sbjct: 233 KHPIDYLHEFMAWKFPEGKIIETVVGAVPASGMLKQLSTSGLVLVGDAGRVSDPITGGGI 292
Query: 342 YFAAKSGRMCAEAIIEGSENGTRMIDEGDLR-KYLEKWDKTYWPTYKVLDVLQKVFYRSN 400
Y SGR+ + + I DL K L+++D+ +V + L K R+
Sbjct: 293 YNGMVSGRIAGNVLADA-------IKANDLSVKKLQRYDR------EVREALGKQLDRNY 339
Query: 401 PAREAFVEMCADEYVQKMTFDSY-----------LYKRVVPGNPLEDLKLA 440
A+E FV D + + + L K ++ NP L+LA
Sbjct: 340 KAKE-FVVKAEDSLMNSVARSLHGVNFEEMSVPKLLKEIITRNPSMFLELA 389
>gi|374996783|ref|YP_004972282.1| geranylgeranyl reductase [Desulfosporosinus orientis DSM 765]
gi|357215149|gb|AET69767.1| geranylgeranyl reductase family protein [Desulfosporosinus orientis
DSM 765]
Length = 363
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 145/325 (44%), Gaps = 50/325 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDIIDR 110
V VIG GPAG + A T A G+ +++RK P C +PL + E +P I +
Sbjct: 18 VVVIGAGPAGSSTAATAAAGGISVLMLDRKEHIGLPVQCAEYVPLSIAAEVPVPAACIAQ 77
Query: 111 KVTK-MKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
+V + I VA QT P ++ R+V D YL ERA +GA L K
Sbjct: 78 RVEGFVTYIHWEQVA----QTRAPGY---VLHRDVFDRYLAERAVHSGAK----LLTKAQ 126
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
+Q V+ G+ ++ + VIG++G S A+++ A A Q
Sbjct: 127 AVAVADQGVVIKEQ---------GKLSIVKANIVIGSEGPKSVAAQAMGCSLQTLAYAKQ 177
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDF---YGWVFPKCD--------HVAVGTGTVTH 278
VK+ K + + A++Y SP F Y W+FPK D +++G T
Sbjct: 178 ITVKL--RKRLQW---AQIY----FSPSFPGGYAWLFPKNDLANVGVSLDLSLGGNAATA 228
Query: 279 KGDIKKFQLATRNRAKDKILGGKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAGYVTKCS 337
G+ +++ + K+ ++ ++IR IP P+ + + LVGDAAG+ S
Sbjct: 229 LGEFQQYLM------KEGVISEEVIRRTGGTIPIGGPQLKIQEKNLMLVGDAAGHTHPIS 282
Query: 338 GEGIYFAAKSGRMCAEAIIEGSENG 362
GEGI+ A +G++ ++ G
Sbjct: 283 GEGIFPAIVAGKIAGSLAVDSIRRG 307
>gi|292492968|ref|YP_003528407.1| geranylgeranyl reductase [Nitrosococcus halophilus Nc4]
gi|291581563|gb|ADE16020.1| geranylgeranyl reductase [Nitrosococcus halophilus Nc4]
Length = 384
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 126/282 (44%), Gaps = 31/282 (10%)
Query: 134 HEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVG 193
H+ R DA+L A++ GA ++ G M + L DG +
Sbjct: 90 HQPFFFTSRTHFDAHLATLAKEAGAHLMEGTSM-ISLAD-------------DGKTVRLH 135
Query: 194 EKRTLEVDAVIGADGANSRVAKSI---NAGDYDYAIAFQERVKIPDEKMVYYENLAEMYV 250
+ L+ D ++GADG SRVA++I A + A+ + +++P E+ E+Y+
Sbjct: 136 NGKLLKADFIVGADGVRSRVAEAILLHTASKKNLALGLE--IEVPLEQATRVVADPEIYL 193
Query: 251 GDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPI 310
G V YGW+FPK + VG G + K K R L IR + + +
Sbjct: 194 G--VVKWGYGWIFPKKETQTVGVGGLLSKNPNLKSAFGAFLRQHYDPLPD--IRCKGYHL 249
Query: 311 PEHPRPRRLSGR--VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDE 368
P R+ GR + LVGDAAG V +GEGI FA +SGR+ A+AI + G E
Sbjct: 250 PFGSYKRK-PGRANILLVGDAAGLVEPVTGEGIAFAMQSGRLAAKAIAAAANAGQ---PE 305
Query: 369 GDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMC 410
L+ YL ++ + ++ + VF P + FV +
Sbjct: 306 TALQHYLLEYQQIVSLFFQARMMRYLVF--PQPMQRLFVSLI 345
>gi|251771472|gb|EES52049.1| geranylgeranyl reductase [Leptospirillum ferrodiazotrophum]
Length = 414
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 160/386 (41%), Gaps = 56/386 (14%)
Query: 39 AAKTSPKLTNRNLRV--AVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPL 95
AA+ +P + + V AV+G GPAG A LA G+ I+R KPCGG +
Sbjct: 3 AAQETPVQGTQEIHVDAAVVGLGPAGSTALRLLASAGISCIGIDRSHFPRNKPCGGGVSA 62
Query: 96 -CMVGEFDLPLDIIDRKVTKMKMIS----PSNVAVDIGQTLKPHEYIGMVRREVLDAYLR 150
+ LD I ++T ++ PS D G +P Y VRR+ DA L
Sbjct: 63 RTLPLLPPGLLDEIPHQITSGISLTYRGGPSQNQ-DFG---RPIAY--QVRRDQFDAALL 116
Query: 151 ERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGAN 210
+ A + G V+ G ++ R + +V+ V + R + +V ADGA
Sbjct: 117 DAAYRAGGQVMTG--VETVSARREGREFVI-----------VADHRVIRALSVFAADGAT 163
Query: 211 SRVAKSINAGDYDYAIAFQERVKI-PDEKMVYYENLA----EMYVGDDVS--PDFYGWVF 263
SR+ + + D D + +E + P + +L + +VG D+ Y W F
Sbjct: 164 SRILRDL---DPDSSRHVRENPSLRPFTSAEAFGDLRNPIDDRHVGIDLGLVSGGYAWSF 220
Query: 264 PKCDHVAVGTGTVTHKGDIK--KFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPR--RL 319
PK D + G G G + + + A ++ +G V P+P + R R+
Sbjct: 221 PKKDS-SWGLGVAGFLGPLANPRKEFARYLESRQATVGKA--EVLTWPLPNYRSVRHGRI 277
Query: 320 SGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIE-------GSENGTRMIDEGDLR 372
SG + LVGDA G + GEGIY+A S AEA+I E + +
Sbjct: 278 SG-LFLVGDAGGILDPFLGEGIYYAILSATRGAEALIHELSRKDIAPETAAGLASQ---- 332
Query: 373 KYLEKWDKTYWPTYKVLDVLQKVFYR 398
Y T WP + L +V YR
Sbjct: 333 AYARFVKGTLWPDFAQGARLAQVLYR 358
>gi|432801858|ref|ZP_20035839.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE84]
gi|431348835|gb|ELG35677.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE84]
Length = 429
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 135/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
I+RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPIERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D E + G + LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD----------ALVREGNKVTGVLAGDDILEANVVILADGVNSMLGR 168
Query: 216 S---INAGD-YDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S ++A D + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVSASDPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
+ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 229 NKDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVMIVGDAAGF 306
>gi|341582461|ref|YP_004762953.1| geranylgeranyl hydrogenase [Thermococcus sp. 4557]
gi|340810119|gb|AEK73276.1| geranylgeranyl hydrogenase [Thermococcus sp. 4557]
Length = 370
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 132/315 (41%), Gaps = 46/315 (14%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V +IGGGPAG A LA++ + ++ K C G I LP + + ++
Sbjct: 5 VLIIGGGPAGNYLANLLARDFSVAVVEKKGAFGGKACTGIIGAANYERLGLPEEAVLNEL 64
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPR 172
S + +I + P Y +V R+ L+ L ERA + G
Sbjct: 65 RGAAFYSRIQ-SFEI-ERKTPQAY--LVDRKALEKSLAERAARRG--------------- 105
Query: 173 NFEQPYVLYY--TEYDGTKGG------VGEKRTLEVDAVIGADGANSRVAKSINA-GDYD 223
V YY T + G + G +GE +E +GADG NS VAK+I A + +
Sbjct: 106 ------VDYYMATTFKGFRNGKAVLQHLGETLEVEASFYVGADGVNSSVAKAIGARTNAE 159
Query: 224 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIK 283
+ ++ V++ E + ++ E++V D++ DF+ WV P V G V G I+
Sbjct: 160 FLSGYE--VEVVGE---FRKDFVEVWVNKDMNEDFFMWVAP----VNEGLARVGTLGSIE 210
Query: 284 KFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYF 343
R R I+ +A + R + G VAL+GDAA + + GI F
Sbjct: 211 ALNRFLRVRMLKPT---SIVEFKAGSVGFGWRKPWVRGNVALLGDAALQIKPTTAGGIVF 267
Query: 344 AAKSGRMCAEAIIEG 358
R EA++ G
Sbjct: 268 GMLCARALREALMVG 282
>gi|390961171|ref|YP_006425005.1| putative geranylgeranyl hydrogenase [Thermococcus sp. CL1]
gi|390519479|gb|AFL95211.1| putative geranylgeranyl hydrogenase [Thermococcus sp. CL1]
Length = 370
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 134/316 (42%), Gaps = 48/316 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPLCMVGEFDLPLDIIDRK 111
V +IGGGPAG A LA++ ++E+K K C G I LP + + +
Sbjct: 5 VLIIGGGPAGNYLANLLARD-FSVAVVEKKGSFGGKACTGIIGAENYERLGLPEEAVLNE 63
Query: 112 VTKMKMISP-SNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+ S N + + P Y +V R+ L+ L ERA + G
Sbjct: 64 LRGAVFYSRIQNFEI---ERKSPQAY--LVDRKALEKSLAERAVRRG------------- 105
Query: 171 PRNFEQPYVLYY--TEYDGTKGG------VGEKRTLEVDAVIGADGANSRVAKSINAGDY 222
V YY T + G + G +GE+ +E D +GADG NS VA++I A
Sbjct: 106 --------VDYYMATTFRGFRNGKAVLQHLGERLEVEADFYVGADGVNSAVARAIGAKTK 157
Query: 223 DYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDI 282
++ E V++ E + ++ E++V D++ DF+ WV P V G V G I
Sbjct: 158 AEFLSGYE-VEVVGE---FRKDFVEVWVNKDMNGDFFMWVAP----VNEGLARVGTLGSI 209
Query: 283 KKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIY 342
+ R R + I+ +A + R + G VAL+GDAA + + GI
Sbjct: 210 EALNRFLRVRM---LRPTSIVEFKAGTVGFGWRKPWVRGNVALLGDAALQIKPTTAGGIV 266
Query: 343 FAAKSGRMCAEAIIEG 358
F R EA++ G
Sbjct: 267 FGMLCARALREALLAG 282
>gi|300938975|ref|ZP_07153674.1| FAD dependent oxidoreductase [Escherichia coli MS 21-1]
gi|300456113|gb|EFK19606.1| FAD dependent oxidoreductase [Escherichia coli MS 21-1]
Length = 429
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 138/319 (43%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q+ P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTKESAVTLDFHREQSDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDVLEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSVSLGLVCELGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNDGVIIVGDAAGF 306
>gi|415856447|ref|ZP_11531433.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Shigella flexneri 2a str. 2457T]
gi|313649279|gb|EFS13713.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Shigella flexneri 2a str. 2457T]
Length = 429
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 138/319 (43%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDI--GQTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D GQ P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHRGQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNEGVMIVGDAAGF 306
>gi|432392107|ref|ZP_19634947.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE21]
gi|430919924|gb|ELC40844.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE21]
Length = 429
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 139/319 (43%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
++ +V G V GDI + Q + +D I GGK++ AH +PE
Sbjct: 228 TNNDSVSLGLVCGLGDIAQAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQMVNDGVMIVGDAAGF 306
>gi|159038116|ref|YP_001537369.1| geranylgeranyl reductase [Salinispora arenicola CNS-205]
gi|157916951|gb|ABV98378.1| geranylgeranyl reductase [Salinispora arenicola CNS-205]
Length = 382
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 135/319 (42%), Gaps = 46/319 (14%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAI---PLCMVGE-FDLPLDI 107
+AV+G GPAG +AA A+ GV+T ++ER + K CGG + L +V + ++P
Sbjct: 6 LAVVGAGPAGLSAAYVAARAGVDTVVLERAVHPRYKTCGGGLIGTSLAVVADRIEVPAHD 65
Query: 108 IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK 167
+VT + G L + MVRR+ D LR A GA++ + ++
Sbjct: 66 RADRVTFTWSGRRAFTRRSAGGPL-----VTMVRRDEFDDRLRAAAVAAGATLRQRVAVR 120
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIA 227
P E DG + + + T+ +VIGADG++ A+ + +
Sbjct: 121 SVEP------------EPDGVRLRLVDGTTVTARSVIGADGSSGVTARHVGVRHRQVDLG 168
Query: 228 FQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD------ 281
+ + +P + + V P Y WVFPK D + VG G+
Sbjct: 169 LELELPVPPALQARWRG--RVLVDWGPLPGSYAWVFPKNDLLTVGVIAARGAGERTRAYL 226
Query: 282 ---IKKFQLATRNRAKDKILGGKIIRV--EAHPIPEHPRPRRLSGRVALVGDAAGYVTKC 336
+ + LA D G + R E P+ RR GRV + GDAAG +
Sbjct: 227 RSFVDRLGLADVEPVHDS---GHLTRCRQEGSPL------RR--GRVLVAGDAAGLLEPW 275
Query: 337 SGEGIYFAAKSGRMCAEAI 355
S EGI +A +SG + A+
Sbjct: 276 SREGISYALRSGELAGAAV 294
>gi|284161827|ref|YP_003400450.1| geranylgeranyl reductase [Archaeoglobus profundus DSM 5631]
gi|284011824|gb|ADB57777.1| geranylgeranyl reductase [Archaeoglobus profundus DSM 5631]
Length = 386
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 142/335 (42%), Gaps = 46/335 (13%)
Query: 65 AAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLD-IIDRKVTKMKMISPS 121
AA+T A+NG+ L+E++ + P C I + F P I R+V K+ +P
Sbjct: 16 AAKTCAENGLNVLLVEKRQEIGVPVRCAEGISRDALERFVEPKKFFISREVVGAKIFAPD 75
Query: 122 NVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLY 181
+ + + +E ++ R+V D YL A + GA V+ +
Sbjct: 76 GTEITLSEEKAGNEVGYVLERKVFDRYLATLASQAGAEVL------------------VK 117
Query: 182 YTEYD-GTKGGV--------GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERV 232
T YD K G+ GE+ +E VIGADG SRVAK + V
Sbjct: 118 TTAYDFERKDGIVKVKLRRMGEEWEVETKLVIGADGVESRVAKFFGIDTTLKPDGIESCV 177
Query: 233 KIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNR 292
+ + + + ++G ++P Y W+FPK VG G + K + +
Sbjct: 178 QYLMTNIDFDPDYCYFWLGKSIAPGGYIWLFPKRVGANVGIGVMPSIAK-KTPKEYLDDF 236
Query: 293 AKDKILGGKIIRVEAHPIPEHPRPRR-LSGRVALVGDAAGYVTKCSGEGIYFAAK----S 347
+ K G+I+ + A +P + ++ V LVGDAA + +G GI A K +
Sbjct: 237 VQKKFPDGRIVELVAGAVPVCGEIKTAVADNVMLVGDAARHADPITGGGIANAMKAGYYA 296
Query: 348 GRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTY 382
G++ AEA+ + + K+L+++DK +
Sbjct: 297 GKVAAEAVKKNDFSA----------KFLKRYDKLW 321
>gi|423074974|ref|ZP_17063693.1| phage prohead protease, HK97 family [Desulfitobacterium hafniense
DP7]
gi|361853923|gb|EHL06038.1| phage prohead protease, HK97 family [Desulfitobacterium hafniense
DP7]
Length = 430
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 153/364 (42%), Gaps = 53/364 (14%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPLDI-----I 108
V+GGG AG AA LAK G+E L+ER K G E +P D +
Sbjct: 10 VVGGGIAGTVAAYLLAKEGLEVILVERGNYAGSKNMTGGRIYSHSLEKIMP-DFAREAPV 68
Query: 109 DRKVTKMK---MISPSNVAVDIGQT---LKPHEYIGMVRREVLDAYLRERAEKNGASVIN 162
+R++T+ K M SNV +D + ++ + ++R V D +L E+AE G +I
Sbjct: 69 ERRITREKISLMTDESNVTLDFYSSKLGVQGSDSYSILRG-VFDQWLAEKAEAAGVQIIP 127
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN---- 218
G+ + + R + G V + LE D I ADG NS +A+ +
Sbjct: 128 GIRVDDLMMREGK------------VCGVVAGEDELEADITILADGVNSLLAQKLGFRGE 175
Query: 219 AGDYDYAIAFQERVKIPDEKMV------YYENLAEMYVGDDVSPDFYGWVFPKCDHVAVG 272
+ A+ +E +++P + + +E A ++ G S G F + ++
Sbjct: 176 LAAHHVAVGAKEIIELPPQVIEDRFNCNGHEGTAWLFAGYP-SDGRVGGGFLYTNKSSIS 234
Query: 273 TGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR---PRRLS 320
G VT D+ K +D I GK I H +PE PR +
Sbjct: 235 LGVVTTLSDVIKGHKTVPQMLEDFKQHPAVQPLIKDGKTIEYSGHLVPEAGLAMVPRIVG 294
Query: 321 GRVALVGDAAGYVTKCS--GEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKW 378
V +VGDAAG+ G+ FA S A+A+++ E G EG L+ Y E
Sbjct: 295 NGVLVVGDAAGFCINLGYMVRGMDFAVASAECAAKAVLKAKEAGD--FSEGYLQCYQELL 352
Query: 379 DKTY 382
D+++
Sbjct: 353 DQSF 356
>gi|195953703|ref|YP_002121993.1| geranylgeranyl reductase [Hydrogenobaculum sp. Y04AAS1]
gi|195933315|gb|ACG58015.1| geranylgeranyl reductase [Hydrogenobaculum sp. Y04AAS1]
Length = 376
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 98/220 (44%), Gaps = 18/220 (8%)
Query: 139 MVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTL 198
+V RE D +L +A++ GA ++ + K D+ P V + + +K
Sbjct: 87 IVDREEFDHFLISKAQEKGAHLLEEITAK-DIELT---PTV---------RKVITDKGVF 133
Query: 199 EVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDF 258
E D VIGADG +S KSI VK+P + ++ E+ + V
Sbjct: 134 EADYVIGADGYHSITRKSIACKSASRKFFIAMEVKVPKDMFKDFKE-DEVLIDIGVVKKG 192
Query: 259 YGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRR 318
YGW FP+ + V +G T + + F+ T+N I K R+++ IP + +
Sbjct: 193 YGWYFPQGEFVNIGIATAEKEDLLNIFKAYTKNHKLFPIDISKY-RIKSWFIPFISKAQE 251
Query: 319 LS---GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
L RV L GDA V GEGI +A SG +CA AI
Sbjct: 252 LRLGRDRVFLTGDAGAIVDPLLGEGIRYAYLSGSLCARAI 291
>gi|410030843|ref|ZP_11280673.1| geranylgeranyl reductase [Marinilabilia sp. AK2]
Length = 417
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 151/348 (43%), Gaps = 70/348 (20%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIP------LCMVGEFDLPL 105
+ +IG GPAG +AA LA++G++ L+++K K CG A+ L + E L L
Sbjct: 11 IVIIGAGPAGTSAAWHLAESGLKIALLDKKSFPRDKICGDALSGNTIFELKKLEEKGLDL 70
Query: 106 DIIDRK-----VTKMKMISPSNVAVDIGQTLKPH------EYIGMVRREV-LDAYLRE-- 151
+ V + SP +D+ + + +Y G V + + D +L
Sbjct: 71 SFFEATEKAYPVDGLSFFSPKGHRLDLFLSDEQKVTEGNLKYPGYVSKRIDFDNFLLAPL 130
Query: 152 RAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANS 211
R +N N +MD + E+ + + R +E V+GADGANS
Sbjct: 131 RKSENVFVFENCEVKQMDFLK--EKVEI------------ICSDRKIEAKLVLGADGANS 176
Query: 212 RVA----------KSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGW 261
+A K +AG Y + IP L E++ + P ++ W
Sbjct: 177 ILARKLWRDKINRKHFSAGLRQYYRNVKFEGDIP---------LIELHFLPGILPGYF-W 226
Query: 262 VFPKCDHVA-VGTGTVTHKGDIKKFQLATRNRAKDKI-----LGGKIIRVEA------HP 309
+FP D+VA VG G ++ +I+K + + K+ I L + + EA
Sbjct: 227 IFPMSDNVANVGIGMLS--SEIEKRSINLKVAMKEIIERHPRLSLRFDQAEALELHKGFG 284
Query: 310 IPEHPRPRRLSG-RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAII 356
+P R ++SG R L+GDAA + +GEGI FA KSGR+ A I+
Sbjct: 285 LPLGSRKSKVSGDRFLLLGDAASLIDPFTGEGIGFAMKSGRLAANFIL 332
>gi|215486874|ref|YP_002329305.1| hypothetical protein E2348C_1784 [Escherichia coli O127:H6 str.
E2348/69]
gi|312966853|ref|ZP_07781071.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli 2362-75]
gi|415842130|ref|ZP_11522915.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli RN587/1]
gi|417283267|ref|ZP_12070564.1| hypothetical protein EC3003_1814 [Escherichia coli 3003]
gi|417286917|ref|ZP_12074204.1| hypothetical protein ECTW07793_1785 [Escherichia coli TW07793]
gi|417755699|ref|ZP_12403783.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC2B]
gi|418996832|ref|ZP_13544432.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC1A]
gi|419002096|ref|ZP_13549633.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC1B]
gi|419007610|ref|ZP_13555053.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC1C]
gi|419013535|ref|ZP_13560890.1| FAD binding domain protein [Escherichia coli DEC1D]
gi|419018295|ref|ZP_13565609.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC1E]
gi|419023998|ref|ZP_13571229.1| FAD binding domain protein [Escherichia coli DEC2A]
gi|419028899|ref|ZP_13576073.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC2C]
gi|419034799|ref|ZP_13581890.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC2D]
gi|419039596|ref|ZP_13586638.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC2E]
gi|419700497|ref|ZP_14228103.1| oxidoreductase [Escherichia coli SCI-07]
gi|422381729|ref|ZP_16461893.1| FAD dependent oxidoreductase [Escherichia coli MS 57-2]
gi|425277940|ref|ZP_18669206.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli ARS4.2123]
gi|432732395|ref|ZP_19967228.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE45]
gi|432759479|ref|ZP_19993974.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE46]
gi|432894523|ref|ZP_20106344.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE165]
gi|215264946|emb|CAS09332.1| predicted oxidoreductase with FAD/NAD(P)-binding domain
[Escherichia coli O127:H6 str. E2348/69]
gi|312288317|gb|EFR16219.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli 2362-75]
gi|323187124|gb|EFZ72440.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli RN587/1]
gi|324007058|gb|EGB76277.1| FAD dependent oxidoreductase [Escherichia coli MS 57-2]
gi|377845449|gb|EHU10471.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC1A]
gi|377847427|gb|EHU12428.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC1C]
gi|377850027|gb|EHU14995.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC1B]
gi|377858519|gb|EHU23358.1| FAD binding domain protein [Escherichia coli DEC1D]
gi|377863237|gb|EHU28043.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC1E]
gi|377865479|gb|EHU30270.1| FAD binding domain protein [Escherichia coli DEC2A]
gi|377875950|gb|EHU40558.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC2B]
gi|377881106|gb|EHU45670.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC2C]
gi|377881869|gb|EHU46426.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC2D]
gi|377894426|gb|EHU58847.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC2E]
gi|380348273|gb|EIA36555.1| oxidoreductase [Escherichia coli SCI-07]
gi|386243210|gb|EII84943.1| hypothetical protein EC3003_1814 [Escherichia coli 3003]
gi|386249250|gb|EII95421.1| hypothetical protein ECTW07793_1785 [Escherichia coli TW07793]
gi|408203396|gb|EKI28451.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli ARS4.2123]
gi|431275582|gb|ELF66609.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE45]
gi|431308652|gb|ELF96931.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE46]
gi|431422436|gb|ELH04628.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE165]
Length = 429
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 136/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
I+RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPIERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 S---INAGD-YDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S ++A D + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVSASDPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
+ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 229 NKDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVMIVGDAAGF 306
>gi|306820176|ref|ZP_07453820.1| FixC protein [Eubacterium yurii subsp. margaretiae ATCC 43715]
gi|304551777|gb|EFM39724.1| FixC protein [Eubacterium yurii subsp. margaretiae ATCC 43715]
Length = 448
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 148/353 (41%), Gaps = 50/353 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC--KPCGGAIPLCMVGEFDL 103
++ ++GGG AG +AA LA G+E L+ER D C K G E +
Sbjct: 18 MSEEKFDAIIVGGGLAGCSAAIVLANAGLEVLLVERG-DFCGAKNMTGGRLYGHSLEKII 76
Query: 104 PLDI----IDRKVTKMKM-ISPSNVAVDIGQTLKPHEYIG-----MVRREVLDAYLRERA 153
P I+RK+T+ K+ + + A D+G K V R D +L +A
Sbjct: 77 PNFAQEAPIERKITREKISLMGEDSAFDVGFGSKKLSSNNENASYTVLRSTFDRWLASKA 136
Query: 154 EKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEK-RTLEVDAVIGADGANSR 212
E+ GA +I G+ + + DG G+ L D VI ADG NS
Sbjct: 137 EEAGAEIIPGILVDELIVE-------------DGKVIGISATGEELYADVVILADGVNSL 183
Query: 213 VAKSINAGD----YDYAIAFQERVKIPDEKMVYY------ENLAEMYVGDDVSPDF-YGW 261
+A+ I + A+ +E +K+ ++ + E +A + GD F G
Sbjct: 184 LAQGIGMKKELEPHQVAVGAKEVIKLGEDVINQRFAVNNGEGVAWLSCGDPTVGGFGGGL 243
Query: 262 VFPKCDHVAVG-TGTVTHKG--DIKKFQLATRNRAKDKIL----GGKIIRVEAHPIPE-- 312
++ D V+VG T++ G D+ QL R + I GG I H +PE
Sbjct: 244 IYTNKDSVSVGVVATLSDIGHSDLSINQLLDRFKEHPSIAPYLEGGTSIEYSGHLVPEEG 303
Query: 313 -HPRPRRLSGRVALVGDAAGYVTKC--SGEGIYFAAKSGRMCAEAIIEGSENG 362
H P V + GDAAG+ + G+ FA +SGR+ AE +I E G
Sbjct: 304 LHMVPELYRDGVLVTGDAAGFCINLGFTVRGMDFAIESGRLAAETVIRAREIG 356
>gi|422828991|ref|ZP_16877160.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli B093]
gi|432680275|ref|ZP_19915652.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE143]
gi|371612092|gb|EHO00610.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli B093]
gi|431221205|gb|ELF18526.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE143]
Length = 429
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 138/319 (43%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q+ P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTKESAVTLDFHREQSDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDVLEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNDGVIIVGDAAGF 306
>gi|386614249|ref|YP_006133915.1| electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli UMNK88]
gi|332343418|gb|AEE56752.1| electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli UMNK88]
Length = 429
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 138/319 (43%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEKM------VYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E++ E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSS-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
++ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNNDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNDGVIIVGDAAGF 306
>gi|20092690|ref|NP_618765.1| bacteriochlorophyll synthase [Methanosarcina acetivorans C2A]
gi|19917977|gb|AAM07245.1| bacteriochlorophyll synthase [Methanosarcina acetivorans C2A]
Length = 396
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 138/335 (41%), Gaps = 56/335 (16%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIP-----LCMVGEFDLPL 105
V V+G GP+G AA AKNG L+++K + P C G +P ++ E LP
Sbjct: 9 VIVVGAGPSGSTAALHSAKNGASVLLLDKKREIGNPIQCAGFLPDASEVQALLPEAKLPE 68
Query: 106 DI-------IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGA 158
+ + + + ++I P+ + VR VLD ++ A
Sbjct: 69 TLKNYPDSCVLQHIKTQRIIPPNGNVKEFA-----------VRGRVLDRRRYDQFLAEQA 117
Query: 159 SVINGLFMKMDLPRNFEQPYVLYYTEYDGTK---GGVGEKRTLEVDAVIGADGANSRVAK 215
+ M T +GTK GV K L+ VIGADG NS VAK
Sbjct: 118 AAAGAELMAKT-----------RVTRVEGTKVETSGVFGKHILKAKVVIGADGPNSLVAK 166
Query: 216 S----INAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA- 270
S + + ++A + +V+ D + EMY G D P Y W+FP+ + A
Sbjct: 167 SKGLAMKPESKETSVALEYQVRNVD----IDPDALEMYFGKDYVPGGYAWIFPEGERRAN 222
Query: 271 VGTGT---VTHKGDIKKFQLATRNR----AKDKILGGKIIRVEAHPIPEHPRPRRLSGRV 323
VG G + KG K L R A K+ I+ V A IP + P +
Sbjct: 223 VGIGIRSGMAEKGISAKDYLHRFMRDHPLAAPKLKNAIIMNVVAGIIPINGAPANTATED 282
Query: 324 ALV-GDAAGYVTKCSGEGIYFAAKSGRMCAEAIIE 357
L+ GDAAG++ +G GI A +G++ E E
Sbjct: 283 TLIAGDAAGHIIATNGGGIPPAMIAGKIAGETAAE 317
>gi|293410014|ref|ZP_06653590.1| oxidoreductase FixC [Escherichia coli B354]
gi|291470482|gb|EFF12966.1| oxidoreductase FixC [Escherichia coli B354]
Length = 429
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 136/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDVLEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S+ A D + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
++ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 229 NNDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVMIVGDAAGF 306
>gi|405979526|ref|ZP_11037869.1| geranylgeranyl reductase [Actinomyces turicensis ACS-279-V-Col4]
gi|404391942|gb|EJZ87003.1| geranylgeranyl reductase [Actinomyces turicensis ACS-279-V-Col4]
Length = 426
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 167/403 (41%), Gaps = 43/403 (10%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEF---DLPLDII 108
V ++G GPAG + A LAK G++ ++E+ + K CG + V E + +
Sbjct: 13 VIIVGAGPAGSSTAYHLAKLGIDVLVLEKAEFPRDKICGDGLTPAAVHELIAMGMDISTW 72
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNGASVINGLFMK 167
+R + +++D Y GM R R LD L + A GA ++ G+ +
Sbjct: 73 NRNRGLTVVGGGHTISLDWPDQKSLPGY-GMTRARMQLDHDLIQHAVHAGARLMEGITVT 131
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN---AGDYDY 224
L + + + +G E + V+ G ++R+A S+ A
Sbjct: 132 GALTSPMGR---VCGVKAKKGRGKDAEALEMRAKMVVDCGGVSARLATSLGIEKAIKRPM 188
Query: 225 AIAFQERVKIPDEKMVYYENLAEMYVG----DDVSPDFYGWVFPKCDHVA-VGTGTVTHK 279
+A + K P Y E+ E++ G D+ P YGWVFP D + VG G+V
Sbjct: 189 GVAARAYFKSPRGNEDYMESQLELWSGVPGQSDLLPG-YGWVFPMGDGIVNVGLGSVAST 247
Query: 280 GDI------KKFQLATRNRAKDKILGGK----IIRVEAHPIPEHPRPRRLSGRVALVGDA 329
+ K F+ N ++ + +R A P+ + +P +SG V LVGDA
Sbjct: 248 ANATQLPYKKVFEQWIANVPEEWGFTPENQIGPLRSAALPMSFNRKPHYVSGLV-LVGDA 306
Query: 330 AGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVL 389
G V+ +GEGI A K+GR A I + T + + +Y E + Y Y++
Sbjct: 307 GGMVSPFNGEGIAPALKAGRFAASCIAQAFSRTTSAGIDRAMSEYPELLREEYGGYYQLG 366
Query: 390 DVLQKVFYRSNPAREAFVEMCADE---------YVQKMTFDSY 423
V + NP +++C + +V K+ D Y
Sbjct: 367 RVFVALI--ENP---RIMQLCTNRGLPIPRLMTFVHKLLSDGY 404
>gi|222444808|ref|ZP_03607323.1| hypothetical protein METSMIALI_00421 [Methanobrevibacter smithii
DSM 2375]
gi|222434373|gb|EEE41538.1| geranylgeranyl reductase family [Methanobrevibacter smithii DSM
2375]
Length = 393
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 155/356 (43%), Gaps = 63/356 (17%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V VIGGGPAG +AA+ A G + L++++ + P A + G L ++ R +
Sbjct: 6 VLVIGGGPAGSSAAKHAALGGAKVILLDKRSEIGAPKRCAEGVSKKGLAKLGIEPSPRWI 65
Query: 113 TK----MKMISPSNVAVDIGQ---TLKPHEYIGMVRREVLDAYLRERAEKNGASV-INGL 164
TK +++ SP V + + L YI + R+V D ++ A + GA + I L
Sbjct: 66 TKEIDGVRLTSPDGTDVWLTEEEIELPEAGYI--LERKVFDKHMAMDAARAGAEIRIKTL 123
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK------SIN 218
MD E +++ + +G+ ++ VI ADG VA+ S
Sbjct: 124 ATGMD---KIEDGFIV-------STESMGKTEEIKAKIVIAADGPEGHVARWAGLKGSAK 173
Query: 219 AGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVT 277
A + + + + E V + ++ E + E Y G +P Y W+FPK D +A VG +
Sbjct: 174 AKEMESGVQY-EMVNVEFDR----EAVIEFYFG-SCAPGGYVWIFPKGDDIANVGLAILQ 227
Query: 278 HKGDIKKFQL---------ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGD 328
HK + AT+N + + V P+ P+ + + + GD
Sbjct: 228 HKATKPAIEYLDDFIAKCPATKNAQAVE------LNVGGDPVGGMPK-KMYDDNILVCGD 280
Query: 329 AAGYVTKCSGEGIYFAAK----SGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDK 380
AAG V +G GI +G++ AEAI EG + +K+L+K+DK
Sbjct: 281 AAGQVNPLTGGGIISGMTGGMYAGQVAAEAIKEGDHS----------KKFLKKYDK 326
>gi|222156450|ref|YP_002556589.1| electron transfer flavoprotein-quinone [Escherichia coli LF82]
gi|387617039|ref|YP_006120061.1| hypothetical protein NRG857_08515 [Escherichia coli O83:H1 str. NRG
857C]
gi|433198269|ref|ZP_20382181.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE94]
gi|222033455|emb|CAP76196.1| electron transfer flavoprotein-quinone [Escherichia coli LF82]
gi|312946300|gb|ADR27127.1| hypothetical protein NRG857_08515 [Escherichia coli O83:H1 str. NRG
857C]
gi|431722935|gb|ELJ86897.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE94]
Length = 429
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 136/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
I+RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPIERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 S---INAGD-YDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S ++A D + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVSASDPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
+ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 229 NKDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLINGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVMIVGDAAGF 306
>gi|436840799|ref|YP_007325177.1| Geranylgeranyl reductase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432169705|emb|CCO23076.1| Geranylgeranyl reductase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 380
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 132/327 (40%), Gaps = 49/327 (14%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGE----FDLPLDI 107
V + GGGP G AA LA+ G + +I++ + K CGG I + FD D+
Sbjct: 7 VIIAGGGPTGSTAACVLARKGFKVAIIDKAEFPRKKLCGGLITHKTIQTLEKVFDCNADL 66
Query: 108 IDRKVTKMKMISPS------NVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVI 161
+ K + SP + + ++ P + V R D +L ++A GA +
Sbjct: 67 LKEKGI-INFESPEYSIHYRDHKIRDAKSSIPFRF---VDRVDFDYFLLQKAANAGAHIF 122
Query: 162 NGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGD 221
G E+ + Y + R + +IGADG NS + K +
Sbjct: 123 TG-----------EE---ITCCNYKDAEIKTKSNRIFKGKYLIGADGVNSTIRKFLPYDK 168
Query: 222 YDYAIAFQERVKIPDEKMVYYENLA--EMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHK 279
+ ++I + + + E+Y+G + Y WVFP V G G +
Sbjct: 169 EKWRENMASTIEIIFDAKDFPREVKKPELYIGHLKAG--YLWVFPAKGKVVTGIGALN-- 224
Query: 280 GDIKKFQLATRNRAK--DKILGGKIIRVEAHPIPEHPRP------RRLSGRVALVGDAAG 331
+ T +A D + I+ E+ P+ P P GR L GDAAG
Sbjct: 225 ------RCTTNFKATYMDFLKSQGIVNPESLPMRGFPLPYGNFMKNPCFGRTILAGDAAG 278
Query: 332 YVTKCSGEGIYFAAKSGRMCAEAIIEG 358
V GEGI++A +SGR A+AI +G
Sbjct: 279 LVEPLFGEGIFYALQSGRYVADAIAKG 305
>gi|297583492|ref|YP_003699272.1| geranylgeranyl reductase [Bacillus selenitireducens MLS10]
gi|297141949|gb|ADH98706.1| geranylgeranyl reductase [Bacillus selenitireducens MLS10]
Length = 431
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 154/348 (44%), Gaps = 59/348 (16%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPL-----CMVGEF--DLPLD 106
V+G GPAG +AA T AKNG++ LIER + K G I ++ EF + PL+
Sbjct: 9 VVGAGPAGTSAAYTAAKNGLDVLLIERGEFPGSKNVMGGILYRKQMEDVIPEFWKEAPLE 68
Query: 107 --IIDRK---VTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVI 161
+++++ + K M++ S +D G+ +P+ ++R + D + ++A + GA ++
Sbjct: 69 RPVVEQRFWFLDKESMVTTSYKGLDWGK--EPYNKFTVLRSK-FDKWFADKAVEQGALLV 125
Query: 162 NGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKR---TLEVDAVIGADGANSRVAKSIN 218
N + + N G GV R + D VI ADG NS + K +
Sbjct: 126 NETVVTECIVEN-------------GKVVGVRTDRPDGDVYADVVILADGVNSLLGKQLG 172
Query: 219 AGD----YDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYG----------WVFP 264
+ + A+ E +K+ D+K V ++ VS + +G +++
Sbjct: 173 FHNEWKPNEVALTVMEVLKL-DKKTV--NERFQVNENQGVSIEIFGEATKGALGTSFLYT 229
Query: 265 KCDHVAVGTGTVTH---KGDIKKFQLATRNRAKDKIL----GGKIIRVEAHPIPE---HP 314
D + +G GT K +K ++L + I G + AH IPE
Sbjct: 230 NKDSINIGVGTTLSEMIKRKMKPYELLDELKEHPMIAPLIEGSESQEYLAHLIPEGGFDS 289
Query: 315 RPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENG 362
P+ + V LVGDAA +V EG A SG+M AE +++ E G
Sbjct: 290 VPKLVGNGVILVGDAAQFVNALHQEGSNLAMTSGKMAAETVMKAKEVG 337
>gi|148643761|ref|YP_001274274.1| FAD-dependent dehydrogenase [Methanobrevibacter smithii ATCC 35061]
gi|261350619|ref|ZP_05976036.1| geranylgeranyl hydrogenase [Methanobrevibacter smithii DSM 2374]
gi|209572866|sp|A5UNX8.1|GGR_METS3 RecName: Full=Digeranylgeranylglycerophospholipid reductase;
Short=DGGGPL reductase; AltName:
Full=2,3-di-O-geranylgeranylglyceryl phosphate
reductase; AltName: Full=Geranylgeranyl reductase;
Short=GGR
gi|148552778|gb|ABQ87906.1| predicted FAD-dependent dehydrogenase, geranylgeranyl reductase
family [Methanobrevibacter smithii ATCC 35061]
gi|288861402|gb|EFC93700.1| geranylgeranyl hydrogenase [Methanobrevibacter smithii DSM 2374]
Length = 393
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 155/356 (43%), Gaps = 63/356 (17%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V VIGGGPAG +AA+ A G + L++++ + P A + G L ++ R +
Sbjct: 6 VLVIGGGPAGSSAAKHAALGGAKVILLDKRSEIGAPKRCAEGVSKKGLAKLGIEPSPRWI 65
Query: 113 TK----MKMISPSNVAVDIGQ---TLKPHEYIGMVRREVLDAYLRERAEKNGASV-INGL 164
TK +++ SP V + + L YI + R+V D ++ A + GA + I L
Sbjct: 66 TKEIDGVRLTSPDGTDVWLTEEEIELPEAGYI--LERKVFDKHMAMDAARAGAEIRIKTL 123
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK------SIN 218
MD E +++ + +G+ ++ VI ADG VA+ S
Sbjct: 124 ATGMD---KIEDGFIV-------STESMGKTEEIKAKIVIAADGPEGHVARWAGLKGSAK 173
Query: 219 AGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVT 277
A + + + + E V + ++ E + E Y G +P Y W+FPK D +A VG +
Sbjct: 174 AKEMESGVQY-EMVNVEFDR----EAVIEFYFG-SCAPGGYVWIFPKGDDIANVGLAILQ 227
Query: 278 HKGDIKKFQL---------ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGD 328
HK + AT+N + + V P+ P+ + + + GD
Sbjct: 228 HKATKPAIEYLDDFIAKCPATKNAQAVE------LNVGGDPVGGMPK-KMYDDNILVCGD 280
Query: 329 AAGYVTKCSGEGIYFAAK----SGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDK 380
AAG V +G GI +G++ AEAI EG + +K+L+K+DK
Sbjct: 281 AAGQVNPLTGGGIISGMTGGMYAGQVAAEAIKEGDHS----------KKFLKKYDK 326
>gi|91773284|ref|YP_565976.1| geranylgeranyl reductase [Methanococcoides burtonii DSM 6242]
gi|121684345|sp|Q12WF0.1|GGR2_METBU RecName: Full=Digeranylgeranylglycerophospholipid reductase 2;
Short=DGGGPL reductase 2; AltName:
Full=2,3-di-O-geranylgeranylglyceryl phosphate reductase
2; AltName: Full=Geranylgeranyl reductase 2; Short=GGR 2
gi|91712299|gb|ABE52226.1| oxidoreductase with FAD binding domain [Methanococcoides burtonii
DSM 6242]
Length = 406
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 149/351 (42%), Gaps = 49/351 (13%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDI--- 107
V V+G GP G AA+T AK G++ +IE++ + P C VG+F L I
Sbjct: 7 VIVVGAGPGGSIAAKTAAKEGLDVLMIEKRQEIGDPIRCAEG-----VGKFHLKQHIEPD 61
Query: 108 ---IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV---- 160
I V +ISP +++ + + E ++ R++ D L + GA V
Sbjct: 62 PRWICADVKGSYIISPDGTRIEMAEEMSGGEVGYVLERKIFDRALANESALAGAEVRVKT 121
Query: 161 -INGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK---- 215
L ++ D + + +G++ + VIGADG S+V +
Sbjct: 122 RATDLIIENDTVCGIKLMH-------------LGKEYEVRSKIVIGADGVESKVGRWAGI 168
Query: 216 --SINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VG 272
S+ D + + D++ Y+ Y+G++++P Y W+FPK + A VG
Sbjct: 169 ETSVKPSDIETCAQYLVSNANIDQEFCYF------YLGNEIAPAGYVWMFPKGGNKANVG 222
Query: 273 TGTV-THKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPR-PRRLSGRVALVGDAA 330
G + + G K +L K+ + KII + +P R ++ + LVGDAA
Sbjct: 223 IGILGSRAGKDKPIELLNDFIEKN-MPDAKIIEMVIGGVPVCGTIERTIANGLMLVGDAA 281
Query: 331 GYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKT 381
+G GI A +G++ E + G ID L++Y + W T
Sbjct: 282 RQSDPITGGGIINAMDAGKIAGEIAAKAIRKGDCSIDT--LQEYEDLWRAT 330
>gi|256397153|ref|YP_003118717.1| geranylgeranyl reductase [Catenulispora acidiphila DSM 44928]
gi|256363379|gb|ACU76876.1| geranylgeranyl reductase [Catenulispora acidiphila DSM 44928]
Length = 423
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 140/329 (42%), Gaps = 30/329 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVGEFDLPLDIIDR 110
V V+G GP+G A A LA G++ L+E+ + K CG G P + + +D +
Sbjct: 9 VIVVGAGPSGSATAHHLATAGLDVLLLEKSQFPREKVCGDGLTPRAVKSLVRMGVDTSEE 68
Query: 111 ----KVTKMKMISPSNVAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNGASV---IN 162
+++I L + G+VR R D L +AEK+GA + N
Sbjct: 69 AGWLHNKGLRIIGGGMRLEMPWPELAAYPNYGLVRPRADFDQILARQAEKSGARLHENTN 128
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDY 222
+D N T+ DG K + + ++ ADG ++R++ ++
Sbjct: 129 VTGPVVDPRSNRVIGVTARITDADGGK----RETSFRAPLIVAADGNSTRLSIALGLHKR 184
Query: 223 D---YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTH 278
D +A++ K P Y E+ E++ G+ + P YGWVF D + VG G +
Sbjct: 185 DDRPMGVAYRTYYKSPRTNDDYLESWLELWDGERLLPG-YGWVFGMGDGTSNVGLGILNT 243
Query: 279 KGDIKKFQLATRNRAKDKILGGKI----------IRVEAHPIPEHPRPRRLSGRVALVGD 328
+ + RA K + IR A P+ + +P G V LVGD
Sbjct: 244 TKSFRNVKYPDLLRAWLKNTPDEWGFNEENRTEPIRGAALPMGFNRQPHYTRG-VLLVGD 302
Query: 329 AAGYVTKCSGEGIYFAAKSGRMCAEAIIE 357
A G V +GEGI +A +SG + A+ I +
Sbjct: 303 AGGMVNPFNGEGIAYAMESGELAADVIAQ 331
>gi|218689644|ref|YP_002397856.1| hypothetical protein ECED1_1901 [Escherichia coli ED1a]
gi|218427208|emb|CAR08094.2| putative oxidoreductase subunit with FAD/NAD(P)-binding domain
[Escherichia coli ED1a]
Length = 429
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 134/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
I+RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPIERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN----AGDYDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S+ + + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVSASNPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
+ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 229 NKDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVMIVGDAAGF 306
>gi|432397500|ref|ZP_19640281.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE25]
gi|432406716|ref|ZP_19649425.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE28]
gi|432723124|ref|ZP_19958044.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE17]
gi|432727711|ref|ZP_19962590.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE18]
gi|432741402|ref|ZP_19976121.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE23]
gi|432990711|ref|ZP_20179375.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE217]
gi|433110922|ref|ZP_20296787.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE150]
gi|430915604|gb|ELC36682.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE25]
gi|430929475|gb|ELC49984.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE28]
gi|431265678|gb|ELF57240.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE17]
gi|431273400|gb|ELF64474.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE18]
gi|431283093|gb|ELF73952.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE23]
gi|431494793|gb|ELH74379.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE217]
gi|431628226|gb|ELI96602.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE150]
Length = 429
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 136/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 S---INAGD-YDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S ++A D + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVSASDPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
+ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 229 NKDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVMIVGDAAGF 306
>gi|110641820|ref|YP_669550.1| hypothetical protein ECP_1646 [Escherichia coli 536]
gi|191171689|ref|ZP_03033236.1| protein FixC homolog [Escherichia coli F11]
gi|300987750|ref|ZP_07178328.1| FAD dependent oxidoreductase [Escherichia coli MS 200-1]
gi|422377245|ref|ZP_16457488.1| FAD dependent oxidoreductase [Escherichia coli MS 60-1]
gi|432471002|ref|ZP_19713049.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE206]
gi|432713413|ref|ZP_19948454.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE8]
gi|433077783|ref|ZP_20264334.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE131]
gi|110343412|gb|ABG69649.1| probable electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli 536]
gi|190908019|gb|EDV67611.1| protein FixC homolog [Escherichia coli F11]
gi|300306038|gb|EFJ60558.1| FAD dependent oxidoreductase [Escherichia coli MS 200-1]
gi|324011463|gb|EGB80682.1| FAD dependent oxidoreductase [Escherichia coli MS 60-1]
gi|430998220|gb|ELD14461.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE206]
gi|431257216|gb|ELF50140.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE8]
gi|431597454|gb|ELI67360.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE131]
Length = 429
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 136/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 S---INAGD-YDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S ++A D + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVSASDPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
+ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 229 NKDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVMIVGDAAGF 306
>gi|456391462|gb|EMF56828.1| oxidoreductase [Streptomyces bottropensis ATCC 25435]
Length = 430
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 166/409 (40%), Gaps = 57/409 (13%)
Query: 42 TSPK-LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMV 98
T P+ LT V V+G GPAG A LAK G++ L+E+ K CG G P
Sbjct: 2 TEPQPLTEHTADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTSFPREKVCGDGLTPRATK 61
Query: 99 GEFDLPLDIIDRK---VTKMKMISPSNVAVDIGQT-LKPHEYIGMVR-REVLDAYLRERA 153
+ +DI + K I V + + L + G+VR R+ D L +A
Sbjct: 62 QLVSMGIDISEEAGWLRNKGLRIIGGGVRLQLDWPDLAAYPNYGLVRKRDDFDEQLARQA 121
Query: 154 EKNGASVINGLFMKMDLPRNFEQPYVLYYT-EYDGTKGGVGEKR---TLEVDAVIGADGA 209
+K GA ++ N P + T G +G+++ T V+ ADG
Sbjct: 122 QKAGA--------RLHERCNVGAPIIDDRTGRITGVHAKLGDEKREVTFHAPLVVAADGN 173
Query: 210 NSRVAKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDFYGWV 262
++R++ ++ D +A + P Y E+ E++ G+D YGW+
Sbjct: 174 STRLSLAMGLHRREDRPMGVAVRTYFTSPRHDDDYLESWLELWDKRGPGEDRLLPGYGWI 233
Query: 263 FPKCDHVA-VGTGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIRVEAHP 309
F D + VG G + K+ +A D + G IR A P
Sbjct: 234 FGMGDGTSNVGLGVLNTSAAFKELDWRDVLKAWCASMPEEWGYTPDNMTG--PIRGAALP 291
Query: 310 IPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEG 369
+ + +P G + LVGDA G V +GEGI +A +SG++ A+ I++ T E
Sbjct: 292 MAFNRQPHYTKG-LLLVGDAGGMVNPFNGEGIAYAMESGQIAADVIVQAHARTTPGQREL 350
Query: 370 DLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKM 418
L++Y + VL+ F AFV++ + + K+
Sbjct: 351 ALQRYPQ--------------VLKDTFGGYYTMGRAFVKLIGNPKIMKL 385
>gi|416335787|ref|ZP_11672435.1| putative electron transfer flavoprotein-quinone oxidoreductase FixC
[Escherichia coli WV_060327]
gi|320195405|gb|EFW70030.1| putative electron transfer flavoprotein-quinone oxidoreductase FixC
[Escherichia coli WV_060327]
Length = 429
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 134/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
I+RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPIERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN----AGDYDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S+ + + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVSASNPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
+ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 229 NKDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVMIVGDAAGF 306
>gi|300904552|ref|ZP_07122390.1| FAD dependent oxidoreductase [Escherichia coli MS 84-1]
gi|301306660|ref|ZP_07212719.1| FAD dependent oxidoreductase [Escherichia coli MS 124-1]
gi|415861395|ref|ZP_11535061.1| FAD dependent oxidoreductase [Escherichia coli MS 85-1]
gi|300403517|gb|EFJ87055.1| FAD dependent oxidoreductase [Escherichia coli MS 84-1]
gi|300838122|gb|EFK65882.1| FAD dependent oxidoreductase [Escherichia coli MS 124-1]
gi|315257498|gb|EFU37466.1| FAD dependent oxidoreductase [Escherichia coli MS 85-1]
Length = 429
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 138/319 (43%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
++ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNNDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNDGVMIVGDAAGF 306
>gi|15679712|ref|NP_276830.1| bacteriochlorophyll synthase 43 kDa subunit [Methanothermobacter
thermautotrophicus str. Delta H]
gi|2622850|gb|AAB86190.1| bacteriochlorophyll synthase 43 kDa subunit [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 381
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 142/340 (41%), Gaps = 33/340 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDL-PLDIID 109
+ VIGG AG AA A+ G+ L+ER + P C G + L PL
Sbjct: 1 MVVIGGRVAGSTAAYHAARLGLSVLLLERNPEIGTPVQCAGGVSDSFFKSTGLKPLPEFT 60
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
+ ++ A + + YI + R+ LD YL RA + GA V+ + + D
Sbjct: 61 CTRIRAAAVNGPLGARIVTENPVVRGYI--LERKSLDKYLALRAAEAGADVLT-MSIAGD 117
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK------SINAGDYD 223
L + + DG + +E VI ADG S +A+ D
Sbjct: 118 LIFREGSVSGVVFRGPDGVQ-------EVECGMVIAADGVQSSIARKAGLETGFRPADLC 170
Query: 224 YAIAFQ-ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKGD 281
+ ++ V + E M E Y G +P Y WVFPK + A VG G + K
Sbjct: 171 SCVQYEVAGVDVDPETM-------EFYFGSRFAPSGYLWVFPKGEGRANVGLG-IRRKSC 222
Query: 282 IKKFQLATRNRAKDKILGGKIIRVEAHPIPE-HPRPRRLSGRVALVGDAAGYVTKCSGEG 340
++ L+ NR ++ G K I A +P P R + + +VGDAAG V +G G
Sbjct: 223 SERGPLSYLNRFMEE-RGFKRIEFNAGAVPVCGPIERTFTDGLLVVGDAAGQVDPLTGGG 281
Query: 341 IYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDK 380
I+ AA+ ++ E E E+G +D L +Y +W K
Sbjct: 282 IHLAAECAKIAGEVAAEAIESGR--VDGRFLSRYEMRWRK 319
>gi|86609767|ref|YP_478529.1| geranylgeranyl reductase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558309|gb|ABD03266.1| geranylgeranyl reductase family protein [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 376
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 131/295 (44%), Gaps = 33/295 (11%)
Query: 69 LAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLD-IIDRKVTKMKMISPSNVAVD 126
LAK G ++E+ L KPCGG + + FD I K+ +++ V
Sbjct: 23 LAKRGRSVLVLEKDPLPRYKPCGGGVSPMVAAWFDFDFGPAISLKIRQIRYTWRGGDPVV 82
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----INGLFMKMDLPRNFEQPYVLY 181
+ LK E + MVRR+V D YL ++A+K GA++ ++GL + D +
Sbjct: 83 VDLDLK--EPVWMVRRDVFDHYLIQQAQKQGAALQAECPVSGLEWQSDRWQVMT------ 134
Query: 182 YTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVY 241
T G V + VIGADGA +AK + + +A ++P ++
Sbjct: 135 ------TAGPVWGRY------VIGADGAKGSMAKWLGFQERRRRLAAALEAEVP---LLQ 179
Query: 242 YENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGK 301
+ A + VS + Y W FPK D ++G GT G+ + + A+ + K
Sbjct: 180 PQTAAAHFDFGAVS-NGYIWNFPKADGYSIGAGTF-RGGEKQNLREIAAQYAQSFGVDLK 237
Query: 302 IIRVEAHPIPEHPRPRRLSGRVA-LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
++ HPI + L + A LVGDAA + + EGI + +G + A+AI
Sbjct: 238 SVKPFGHPICLWDEDQPLHTQNALLVGDAACVIDPFTAEGIRPSLLTGMLAAQAI 292
>gi|417138313|ref|ZP_11982046.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 97.0259]
gi|417308158|ref|ZP_12095012.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli PCN033]
gi|338770234|gb|EGP25000.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli PCN033]
gi|386158298|gb|EIH14635.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 97.0259]
Length = 429
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 138/319 (43%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDVLEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
++ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNNDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNDGVMIVGDAAGF 306
>gi|451311272|gb|AGF34079.1| fixC [uncultured bacterium DX-1A-14]
Length = 432
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 166/381 (43%), Gaps = 55/381 (14%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLC-----MVGEF--DLPLD 106
V+G GP+G AAA TLAK G++ IER + K GAI ++ +F D PL+
Sbjct: 9 VVGAGPSGNAAAYTLAKAGLQVLQIERGETPGSKNVQGAILYSDALERIIPDFRDDAPLE 68
Query: 107 --IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
II++++ + S + KP + R D + E+ ++ GA +I
Sbjct: 69 RHIIEQRMWVLDDESFVGSHYRSNRFNKPPYNRYTILRAQFDRWFSEKVQEAGALLICET 128
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKR---TLEVDAVIGADGANSRVAKSI---- 217
++ DL + DG GV R T+ D VI ADG NS +A+
Sbjct: 129 TVR-DLLLD------------DGRVVGVQTDRVGGTVYADIVILADGVNSMLARKAGFRP 175
Query: 218 NAGDYDYAIAFQERVKIPDEKMVYYENLA-------EMYVGDDVSPDFYGWVFPKCDHVA 270
+ A+A +E +P E + N++ EM G+++ + +
Sbjct: 176 ELKPAEVALAVKEIHFLPQETVESRFNVSGDAGVVIEMMGKITRGMAGTGFLYTNRESIT 235
Query: 271 VGTGTVTH---KGDIKKFQLATRNRAKDKIL----GGKIIRVEAHPIPE---HPRPRRLS 320
VG G + + + ++L + +A I GG++ AH IPE P+
Sbjct: 236 VGVGCLLSDFKRQKLSPYELLEQMKAHPAISPLLEGGEMKEYCAHLIPEGGYKAIPQLAG 295
Query: 321 GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDK 380
+VGDAA +V EG A SGR+ AE +IE + G + G+L +Y K D+
Sbjct: 296 DGWLVVGDAAMFVNSVHREGSNLAMTSGRLAAETVIELAREG-KSFSAGNLSRYRAKLDE 354
Query: 381 TYWPTYKVLDVLQKVFYRSNP 401
++ V+ L+K YR+ P
Sbjct: 355 SF-----VMKDLKK--YRNMP 368
>gi|408380869|ref|ZP_11178419.1| digeranylgeranylglycerophospholipid reductase [Methanobacterium
formicicum DSM 3637]
gi|407816134|gb|EKF86696.1| digeranylgeranylglycerophospholipid reductase [Methanobacterium
formicicum DSM 3637]
Length = 393
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 154/365 (42%), Gaps = 63/365 (17%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIP---LCMVGEFDLPLDI 107
+ +IG GPAG AA+ A NG + L+++K + P C + L +G P
Sbjct: 6 ILIIGAGPAGSMAAKHAALNGAKVLLVDKKSEIGAPKRCAEGVSKDGLKRLGVTPNP-RW 64
Query: 108 IDRKVTKMKMISPSNVAVDIGQ-TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFM 166
I + K++++SP+ V + + +K E ++ R+V D +L A + GA + +
Sbjct: 65 IASDINKVRLVSPNGTDVLLDEDKVKLSEVGYVLERKVFDKHLAMDAARAGAQI---MVK 121
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDA--VIGADGANSRVAK------SIN 218
+ + E ++ E+ GT E+ A VIGADG SRV + +
Sbjct: 122 TIATGMSKENDGIVVQLEHMGT--------PFEIKARIVIGADGPESRVGRWAGLKTGLK 173
Query: 219 AGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVT 277
G+ + F E V + + E+ G ++P Y W+FPK + +A VG G ++
Sbjct: 174 PGNMESCAQF-EMVGVD----MKQPGCLELIFG-SIAPGGYAWIFPKGEDIANVGLGIIS 227
Query: 278 HKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL---------------SGR 322
+K D +Q V+ +P ++ +P L +
Sbjct: 228 NKTDKTAYQHLLE-------------FVDKYPGTQNAQPVELNVGGDPVGGLHKELITDN 274
Query: 323 VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTY 382
V + GDAAG V G GI GR+ E + +G + +L++Y ++ K
Sbjct: 275 VLITGDAAGMVNPLDGGGIISGMTGGRIAGEVAAQAIADGDY--SKKNLKEYQKRCQKEI 332
Query: 383 WPTYK 387
++K
Sbjct: 333 GDSFK 337
>gi|386704572|ref|YP_006168419.1| Dehydrogenases (flavoproteins) [Escherichia coli P12b]
gi|383102740|gb|AFG40249.1| Dehydrogenases (flavoproteins) [Escherichia coli P12b]
Length = 429
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 138/319 (43%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
++ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNNDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNDGVMIVGDAAGF 306
>gi|417639202|ref|ZP_12289356.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli TX1999]
gi|419170246|ref|ZP_13714137.1| FAD binding domain protein [Escherichia coli DEC7A]
gi|419180899|ref|ZP_13724516.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC7C]
gi|419186333|ref|ZP_13729850.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC7D]
gi|419191619|ref|ZP_13735079.1| FAD binding domain protein [Escherichia coli DEC7E]
gi|420385676|ref|ZP_14885037.1| FAD binding domain protein [Escherichia coli EPECa12]
gi|433130227|ref|ZP_20315672.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE163]
gi|433134929|ref|ZP_20320283.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE166]
gi|345394054|gb|EGX23819.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli TX1999]
gi|378016883|gb|EHV79760.1| FAD binding domain protein [Escherichia coli DEC7A]
gi|378024267|gb|EHV86921.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC7C]
gi|378030037|gb|EHV92641.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC7D]
gi|378039562|gb|EHW02050.1| FAD binding domain protein [Escherichia coli DEC7E]
gi|391306553|gb|EIQ64309.1| FAD binding domain protein [Escherichia coli EPECa12]
gi|431647275|gb|ELJ14759.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE163]
gi|431657792|gb|ELJ24754.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE166]
Length = 429
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 138/319 (43%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
++ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNNDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNDGVMIVGDAAGF 306
>gi|291437940|ref|ZP_06577330.1| electron transfer oxidoreductase [Streptomyces ghanaensis ATCC
14672]
gi|291340835|gb|EFE67791.1| electron transfer oxidoreductase [Streptomyces ghanaensis ATCC
14672]
Length = 427
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 157/369 (42%), Gaps = 45/369 (12%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVGEFDL 103
L++ V V+G GPAG A LA+ G++ L+E+ + K CG G P + +
Sbjct: 5 LSDNTADVIVVGAGPAGSTTAYHLARAGLDVLLLEKTEFPREKVCGDGLTPRAVKQLVSM 64
Query: 104 PLDIIDR----KVTKMKMISPS-NVAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNG 157
+DI + + +++I + +D +Y G+VR R+ D L +A+K G
Sbjct: 65 GIDISEEAGWLRNKGLRIIGGGVRLQLDWPDLASFPDY-GLVRKRDDFDEQLARQAQKAG 123
Query: 158 ASVINGLFMKMDLPRNFEQPYVLYYT-EYDGTKGGVGEKR---TLEVDAVIGADGANSRV 213
A + N P + T G K +GE++ T V+ ADG ++R+
Sbjct: 124 ARLYERC--------NVGAPIIDDRTGRITGVKAKLGEEKREVTFRAPLVVAADGNSTRL 175
Query: 214 AKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDFYGWVFPKC 266
+ ++ D +A + P Y E+ E++ D + P YGW+F
Sbjct: 176 SLAMGLHRREDRPMGVAVRTYFTSPRHDDDYLESWLELWDRRGPQDRLLPG-YGWIFGMG 234
Query: 267 DHVA-VGTGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIRVEAHPIPEH 313
D + VG G + K+ +A D + G IR A P+ +
Sbjct: 235 DGTSNVGLGVLNTSESFKELDWREVLKAWCASMPEDWGYTPDNMTG--PIRGAALPMAFN 292
Query: 314 PRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRK 373
+P G + LVGDA G V +GEGI +A +SG++ A+ I++ T E L++
Sbjct: 293 RQPHYTRG-LLLVGDAGGLVNPFNGEGIAYAMESGQIAADVIVQAHARTTPAQREVALQR 351
Query: 374 YLEKWDKTY 382
Y TY
Sbjct: 352 YPRVLKDTY 360
>gi|432861827|ref|ZP_20086587.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE146]
gi|431405574|gb|ELG88807.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE146]
Length = 429
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 136/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDVLEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S+ A D + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
++ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 229 NNDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNEGVMIVGDAAGF 306
>gi|16082457|ref|NP_394946.1| geranylgeranyl reductase [Thermoplasma acidophilum DSM 1728]
gi|10640835|emb|CAC12613.1| geranylgeranyl reductase related protein [Thermoplasma acidophilum]
Length = 375
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 153/370 (41%), Gaps = 38/370 (10%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDIIDR 110
V VIG GP+G AA LAK G ++E + KP C G + ++ + I
Sbjct: 4 VIVIGAGPSGSFAAYRLAKAGFTVDILEEHREVGKPVECTGLVSQRVLKY--VRTKSIAG 61
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-INGLFMKMD 169
V + P+ +V I + + ++ R+ D + A G+ + IN + +
Sbjct: 62 TVRGANIFFPNGKSVHI----EKDDPTIVLFRDAFDKDVAAMAIGAGSGIRINARALSVT 117
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIA-- 227
+ + Y E G + E+ + VIGADG NS V + + + ++
Sbjct: 118 ---EHDDHVTVRYRE----NGSIKEE---DARIVIGADGINSVVRRDVYGMRQKHVVSTL 167
Query: 228 -FQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQ 286
+ I DE V +Y+G + F+GW P D V VGTG+ +K + +
Sbjct: 168 QYDMASGIEDEDSV------NVYLGSQYTHGFFGWAVPGGDIVRVGTGS--YKASARPYM 219
Query: 287 LATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAK 346
R D + + + IP R S R LVGDA G V SG GIY
Sbjct: 220 DNLSRRFGDN----RTLGITGAGIPIRMAERLSSRRTVLVGDAGGIVKPLSGGGIYTGIF 275
Query: 347 SGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR-SNPAREA 405
S + A ++E E+ + E LRKY + T K ++Q+++ R S+ +
Sbjct: 276 SSDVAANYVVEALESDS---SEASLRKYDREIRNTIGKELKKDAMIQRIYSRISDRSFNR 332
Query: 406 FVEMCADEYV 415
M ++E +
Sbjct: 333 IYSMISNEKI 342
>gi|419925124|ref|ZP_14442972.1| hypothetical protein EC54115_18792 [Escherichia coli 541-15]
gi|427804834|ref|ZP_18971901.1| flavoprotein [Escherichia coli chi7122]
gi|427809392|ref|ZP_18976457.1| flavoprotein; probably electron transport [Escherichia coli]
gi|432533948|ref|ZP_19770927.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE234]
gi|443617781|ref|YP_007381637.1| oxidoreductase [Escherichia coli APEC O78]
gi|388387363|gb|EIL48981.1| hypothetical protein EC54115_18792 [Escherichia coli 541-15]
gi|412963016|emb|CCK46934.1| flavoprotein [Escherichia coli chi7122]
gi|412969571|emb|CCJ44208.1| flavoprotein; probably electron transport [Escherichia coli]
gi|431061434|gb|ELD70747.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE234]
gi|443422289|gb|AGC87193.1| oxidoreductase [Escherichia coli APEC O78]
Length = 429
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 138/319 (43%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
++ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNNDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNDGVMIVGDAAGF 306
>gi|395770910|ref|ZP_10451425.1| hydrogenase [Streptomyces acidiscabies 84-104]
Length = 434
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 131/316 (41%), Gaps = 63/316 (19%)
Query: 72 NGVETFLIER-KLDNCKPCGGAI--PL--CMVGEFDLPLDIIDRKVTKMKMISPSNVAVD 126
G L+E+ +L K CGG I P C+ F+LP ++ ++ SN
Sbjct: 57 TGRRVLLLEKAELPRYKTCGGGIIGPSRDCLPPGFELPFK------DRVHAVTFSNNG-R 109
Query: 127 IGQTLKPHEYI-GMVRREVLDAYLRERAEKNGASVINGLFMK------MDLPRNFEQPYV 179
+T K + + G++ R D L E A K GA + G+ + +P V
Sbjct: 110 FTRTRKSRQMLFGLINRPEFDQQLVEHALKAGAELRTGVTVTRVEQHGSAVPDRRSVAVV 169
Query: 180 LYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKM 239
L +GG TL AV+GADG+ SR+ + + + + +P
Sbjct: 170 L--------QGG----ETLLARAVVGADGSASRIGAHVGVKLDQVDLGLEAEIPVP---- 213
Query: 240 VYYENLAEMYVGDDV-----SPDFYGWVFPKCDHVAVGTGTVTHKGD---------IKKF 285
E +AE + G + P YGWVFPK D + VG + +G I +
Sbjct: 214 ---ETVAEDWKGRVLIDWGPMPGSYGWVFPKGDTLTVGVISARGEGAATKRYLEDFIGRL 270
Query: 286 QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSGEGIYFA 344
LA + I G + R A P LS GRV + GDAAG + + EGI FA
Sbjct: 271 GLAG---FEPSISSGHLTRCRADDSP-------LSRGRVLVCGDAAGLLEPWTREGISFA 320
Query: 345 AKSGRMCAEAIIEGSE 360
+SGR+ E + SE
Sbjct: 321 LRSGRLAGEWAVRISE 336
>gi|134291393|ref|YP_001115162.1| FAD dependent oxidoreductase [Burkholderia vietnamiensis G4]
gi|134134582|gb|ABO58907.1| FAD dependent oxidoreductase [Burkholderia vietnamiensis G4]
Length = 436
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 153/372 (41%), Gaps = 66/372 (17%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLC-----MVGEF--DLPLD 106
V+G GP+G AAA T+AK G++ IER + K GAI ++ +F D PL+
Sbjct: 11 VVGAGPSGNAAAYTMAKAGLKVLQIERGEYPGSKNVQGAILYAKALEEIIPDFRDDAPLE 70
Query: 107 --IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVI--- 161
II++++ + S V KP + R D + + + GA VI
Sbjct: 71 RHIIEQRLWMLDETSFVGTHVRSDDYNKPPYNRYTIIRAQFDKWFSSKVREAGALVICET 130
Query: 162 --NGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK---- 215
N L + D + + D +G V D VI ADG NS +A+
Sbjct: 131 TVNHLILDGDQ---------VVGVQCDREQGDV------YADVVILADGVNSTLARKAGF 175
Query: 216 --SINAGDYDYAIAFQERVKIPDEKMVYYENLAE-----MYVGDDVSPDFYGWVFPKCDH 268
I+AG + A+A +E + +P+E + N+ E + + ++ G F +
Sbjct: 176 HDEIDAG--NVALAVKEILFMPEETIRQRFNIGEDEGVVIEMVGRITDGMMGTGFLYTNR 233
Query: 269 VAVGTGTVTHKGDIKKFQLATRNRAKDKIL---------------GGKIIRVEAHPIPE- 312
++ G D K+ NR +L GG++ AH IPE
Sbjct: 234 ESLTIGVGCMLSDFKQ----NANRTSPYVLIEQMKRHPAIAPLIEGGEMKEYCAHLIPEG 289
Query: 313 --HPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGD 370
H PR +VGD+ G+V EG A +GR+ AE +I G R G+
Sbjct: 290 GFHAVPRVYGNGWMIVGDSGGFVNAAHREGSNLAMTTGRLAAETVIAAKAAG-RGYRAGE 348
Query: 371 LRKYLEKWDKTY 382
L+ Y K D ++
Sbjct: 349 LKAYKAKLDDSF 360
>gi|419864468|ref|ZP_14386918.1| oxidoreductase [Escherichia coli O103:H25 str. CVM9340]
gi|388340121|gb|EIL06402.1| oxidoreductase [Escherichia coli O103:H25 str. CVM9340]
Length = 429
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 138/319 (43%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
++ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNNDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNDGVMIVGDAAGF 306
>gi|421774053|ref|ZP_16210666.1| oxidoreductase FixC [Escherichia coli AD30]
gi|408460683|gb|EKJ84461.1| oxidoreductase FixC [Escherichia coli AD30]
Length = 429
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 136/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S+ A D + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
++ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 229 NNDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVIIVGDAAGF 306
>gi|419175118|ref|ZP_13718963.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC7B]
gi|378034649|gb|EHV97213.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC7B]
Length = 429
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 136/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S+ A D + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
++ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 229 NNDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVIIVGDAAGF 306
>gi|193068927|ref|ZP_03049886.1| protein FixC homolog [Escherichia coli E110019]
gi|432674732|ref|ZP_19910207.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE142]
gi|192957722|gb|EDV88166.1| protein FixC homolog [Escherichia coli E110019]
gi|431215605|gb|ELF13291.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE142]
Length = 429
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 147/349 (42%), Gaps = 47/349 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G L+ + V+ ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILQANVVVLADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGYVTKC--SGEGIYFAAKSGRMCAEAIIEGSE 360
P+ ++ V +VGDAAG+ + G+ A S + A +I E
Sbjct: 288 MVPQMVNDGVMIVGDAAGFCLNLGFTVRGMDLAIPSAQAAATTVIAAKE 336
>gi|432553665|ref|ZP_19790392.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE47]
gi|431084965|gb|ELD91088.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE47]
Length = 429
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 136/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 S---INAGD-YDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S ++A D + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVSASDPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
+ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 229 NKDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLINGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVMIVGDAAGF 306
>gi|52549258|gb|AAU83107.1| conserved hypothetical protein [uncultured archaeon GZfos26F9]
Length = 433
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 144/345 (41%), Gaps = 62/345 (17%)
Query: 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIP--------LCMV 98
R + V+GGGPAG AA+ AK G T +IE +P C G I L +
Sbjct: 9 REYDIVVVGGGPAGCMAAKYAAKAGASTLIIEENSAIGEPVQCAGLISKRAIEESELKNI 68
Query: 99 GEF---DLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEK 155
G F +L I+ + ++++ SPS P + +RR++ D L + A
Sbjct: 69 GSFVNCELKGAIVHSQSHELRIESPS-----------PDKSAFAIRRDIFDKELAKAAMD 117
Query: 156 NGASVI-NGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVG-EKRTLEVDAVIGADGANSRV 213
GA +I N + R + + T GV E+ ++ + VIGADG S +
Sbjct: 118 EGADLILNSKVKHVKRGRERDGAKLTILAAATTTNAGVNLEENEIKANVVIGADGWRSGI 177
Query: 214 AKSINAGD-YDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-V 271
A+ GD F V+I + + +E +A+++VG ++P F+ WV P + A +
Sbjct: 178 ARMAGVGDGLTVTKNFLNCVQIEGQYEI-HEPVADIFVGKTIAPGFFAWVIPIGETTARI 236
Query: 272 GTGT------------------VTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEH 313
G H KK++ A+ + G I PIP
Sbjct: 237 GLCIDKRFSPHPNPLPFLKRILSEHPVIAKKYKFG----AQSQFTAGAI------PIPTE 286
Query: 314 PRPRRLSGR----VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEA 354
R + + + LVGDAA V +G G+Y+ K G++ EA
Sbjct: 287 -RQKTVKTEEGTGILLVGDAAAQVKPITGGGVYYGMKCGKIAGEA 330
>gi|116753369|ref|YP_842487.1| geranylgeranyl reductase [Methanosaeta thermophila PT]
gi|121692712|sp|A0B573.1|GGR_METTP RecName: Full=Digeranylgeranylglycerophospholipid reductase;
Short=DGGGPL reductase; AltName:
Full=2,3-di-O-geranylgeranylglyceryl phosphate
reductase; AltName: Full=Geranylgeranyl reductase;
Short=GGR
gi|116664820|gb|ABK13847.1| 2,3-di-O-geranylgeranylglyceryl phosphate reductase [Methanosaeta
thermophila PT]
Length = 391
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 156/372 (41%), Gaps = 28/372 (7%)
Query: 65 AAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLP-LDIIDRKVTKMKMISPS 121
AA+T A+ G++ L+E++ + P C + + P I +V ++ +P
Sbjct: 17 AAKTAAEKGLKVVLVEKRQEIGDPVRCAEGVSKARLSSMIKPDPKWIASEVKGARLYAPD 76
Query: 122 NVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLY 181
V + + E ++ R++ D L A + GA V+ +DL R +
Sbjct: 77 GSNVVMSEDKSGDEVGYVLERKIFDRALAMDAARAGARVMVKT-RALDLLRANGSVKGIR 135
Query: 182 YTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK------SINAGDYDYAIAFQERVKIP 235
Y GE +E D VIGADG S+V + ++ GD + F K
Sbjct: 136 AMRY-------GEIIDIEADVVIGADGVESKVGRWAGIDTALKPGDIEVCAQFLLYDKGI 188
Query: 236 DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKGDIKKFQLATRNRAK 294
D++ E ++G++++P Y W FPK +H+A VG G + + + R +
Sbjct: 189 DDE------YCEFFLGNELAPGGYVWSFPKGEHLANVGLGVIGSRSEPGAPVKLLRRFVE 242
Query: 295 DKILGGKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAE 353
++ +I+ + +P P R ++ V LVGDAA +G GI A ++G + E
Sbjct: 243 RRMPEARIVEMVVGGVPVSGPIERTIADGVMLVGDAARQSDPITGGGILNAMQAGMIAGE 302
Query: 354 AIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR-SNPAREAFVEMCAD 412
+ + +G ++ L Y ++W ++ L++ F R S+ +
Sbjct: 303 VVADAVSSGDTGVE--GLMAYEKRWRESIGKQIARHLDLKEFFIRLSDDDLNKLMHSIQS 360
Query: 413 EYVQKMTFDSYL 424
E V KM L
Sbjct: 361 EDVSKMDLRGML 372
>gi|452944504|ref|YP_007500669.1| geranylgeranyl reductase [Hydrogenobaculum sp. HO]
gi|452882922|gb|AGG15626.1| geranylgeranyl reductase [Hydrogenobaculum sp. HO]
Length = 376
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 100/220 (45%), Gaps = 18/220 (8%)
Query: 139 MVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTL 198
+V R+ D +L +A++ GA ++ + +K D+ P V + + +K
Sbjct: 87 IVDRKEFDHFLISKAQEKGAHLLEEITVK-DIELT---PTV---------RKVITDKGVF 133
Query: 199 EVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDF 258
E D VIGADG +S KSI VK+P + + ++ E+ + V
Sbjct: 134 EADYVIGADGYHSVTRKSIACKSASRKFFIAMEVKVPKDDLKNFKE-DEVLIDIGVVKKG 192
Query: 259 YGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRR 318
YGW FP+ + V +G T + + F+ T+N I K R+++ IP + +
Sbjct: 193 YGWYFPQGEFVNIGIATAEKEDLLNIFKAYTKNHKLFPIDISKH-RIKSWFIPFISKAQE 251
Query: 319 LS---GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
L RV L GDA V GEGI +A SG +CA AI
Sbjct: 252 LRLGRDRVFLTGDAGAIVDPLLGEGIRYAYLSGGLCARAI 291
>gi|86606632|ref|YP_475395.1| geranylgeranyl reductase [Synechococcus sp. JA-3-3Ab]
gi|86555174|gb|ABD00132.1| geranylgeranyl reductase family protein [Synechococcus sp.
JA-3-3Ab]
Length = 376
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 125/296 (42%), Gaps = 35/296 (11%)
Query: 69 LAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLD-IIDRKVTKMKMISPSNVAVD 126
LAK G ++E+ L KPCGG + + FD I K+ +++ V
Sbjct: 23 LAKRGRSVLVLEKDPLPRYKPCGGGVSPMVAAWFDFDFSPAISLKIRQIRYTWRGGDPVV 82
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----INGLFMKMDLPRNFEQPYVLY 181
LK E + MVRREV D YL ++A+K GA++ ++G+ + D +
Sbjct: 83 ADLDLK--EPVWMVRREVFDHYLIQQAQKQGAALQTECPVSGIEWQSDRWQVM------- 133
Query: 182 YTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVY 241
T G R VIGADGA +AK + + +A ++P V
Sbjct: 134 ------TATGPVWGRY-----VIGADGAKGSMAKWLGFQNRQRRLAAALEAEVP----VS 178
Query: 242 YENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGK 301
A + + Y W FPK D ++G GT G+ + + A+ + K
Sbjct: 179 EPKTAAAHFDFGAVSNGYIWNFPKADGYSIGAGTF-RGGEKQNLREIAAEYAQSFGVDLK 237
Query: 302 IIRVEAHPI--PEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
+R HPI E +P S LVGDAA V + EGI + +G + A+AI
Sbjct: 238 SVRQFGHPICLWEGDQPLH-SQNALLVGDAACVVDPFTAEGIRPSLLTGMLAAQAI 292
>gi|333986528|ref|YP_004519135.1| geranylgeranyl reductase [Methanobacterium sp. SWAN-1]
gi|333824672|gb|AEG17334.1| geranylgeranyl reductase [Methanobacterium sp. SWAN-1]
Length = 391
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 147/356 (41%), Gaps = 39/356 (10%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDI 107
N + V+G GP G A +A+ G + ++ERK D P C G + + +P +
Sbjct: 3 NYDIVVVGAGPVGSTFARYMAEEGFKVGIMERKKDVGVPLQCAGLVGKKIKKLNIVPDEF 62
Query: 108 IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK 167
I KV + SPS + + + +P Y+ + R D +L E A GA ++ L +
Sbjct: 63 ILNKVYGAYLHSPSGTVLSVSKK-EPEAYV--LDRVAYDKFLAELAVDKGAELL--LNHR 117
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGV----GEKRTLEVDAVIGADGANSRVAKSINAGDYD 223
+D D G V E + + D ++GADG S V+ N
Sbjct: 118 VD--------------HVDIKTGDVYLKNHENKKISADVIVGADGYASSVSDEFNHP--- 160
Query: 224 YAIAFQERVKIPDEKM-VYYENLAEMYVGDDVSPDFYGWVFPKCD-HVAVGTGTVTHKGD 281
+ FQ + D + + + +YV +SP F W+ P + V +G + D
Sbjct: 161 -SKTFQAAQYLVDTGIDAFDSDYVHLYVDSKISPGFL-WIIPVSESQVRIGIFAESSYQD 218
Query: 282 IKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSGEG 340
+ K + +K I++ IP + + +S R L+GDAA V +G G
Sbjct: 219 LTK--ILNEFLDNEKFKNASILKKYQGFIPVYDPKKEISKDRSILLGDAASQVKPTTGGG 276
Query: 341 IYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVF 396
+ +S ++ A A+ N D L KY ++ K Y ++ +QK+F
Sbjct: 277 LIMGFRSAKIAAGAV----SNALHSQDIQLLEKYGKECMKKYKGELRMQLEVQKIF 328
>gi|73669115|ref|YP_305130.1| geranylgeranyl reductase [Methanosarcina barkeri str. Fusaro]
gi|72396277|gb|AAZ70550.1| geranylgeranyl reductase [Methanosarcina barkeri str. Fusaro]
Length = 391
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 135/297 (45%), Gaps = 31/297 (10%)
Query: 67 ETLAKNGVETFLIERK-LDNCKPCGGAIP----LCMVGEFDLPLDIIDRKVTKMKMISPS 121
+T + G+ T LIE++ KPCGGA+ C+ +F LP II+R + K+ +
Sbjct: 18 KTAGERGLLTLLIEKENFPRYKPCGGALSSYGLSCL--DFKLPESIIERNIPKVGVYFRD 75
Query: 122 NVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLY 181
+ +K + +V R+V D +L E+A G V G + +DL ++ +V
Sbjct: 76 RFV----EGMKENNLALLVSRKVFDNFLLEKARGAGIEVHTGEEV-LDLVE--KEDFVEV 128
Query: 182 YTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVY 241
T D T G V+ ++G+ + + D +IPD+ V
Sbjct: 129 RTT-DNTYLG---------SFVLISEGSGGTLKYKVRPRDKITEYGLGLVSEIPDDDEVI 178
Query: 242 YENL-AEMYVGDDVSPDFYGWVFPKCDHVAVG-TGTVTHKGDIKKFQLATRNRAKDKILG 299
+ + V+ YGW+FP + + G G + KK L + ++ L
Sbjct: 179 RNRFPGTINIHFGVAKGGYGWIFPHAGYYSAGIVGAAQYLEHPKKTLL---DFLEENGLS 235
Query: 300 GKIIRVEAHPIPEHPRPRR-LSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
G V +H IP+ R+ L+ R+ L GDAAG+V +GEG+ +A +SG++ AE +
Sbjct: 236 GD-FPVRSHVIPKGGIKRKILNSRLLLSGDAAGFVDAFTGEGLSYAIRSGQLAAETV 291
>gi|229821710|ref|YP_002883236.1| geranylgeranyl reductase [Beutenbergia cavernae DSM 12333]
gi|229567623|gb|ACQ81474.1| geranylgeranyl reductase [Beutenbergia cavernae DSM 12333]
Length = 431
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 143/331 (43%), Gaps = 28/331 (8%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCG-GAIP-----LCMVGEFDLPL 105
V V+G GPAG A A LA++G+E L+E+ K CG G P L +G P
Sbjct: 11 VIVVGAGPAGSATAHYLAQHGLEVLLLEKATFPRDKVCGDGLTPRAVAELVTMGVPTRPE 70
Query: 106 DIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNGASVINGL 164
D R + + + Q +Y G+VR R LD+ L A +GA ++ G+
Sbjct: 71 DGWIRNKGLRVIGGGHRLELPWPQVASYPDY-GLVRARSDLDSTLASHARASGAKLLEGM 129
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGE-KRTLEVDAVIGADGANSRVAKSINA---G 220
+ + + + + D GE +RT V+ A G ++RVA ++
Sbjct: 130 AVTKPVTDDAGRIVGVQARPVDSRGRATGEAQRTFTAPLVVDAGGVSARVATAMGVEKRS 189
Query: 221 DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDF---YGWVFPKCDHVA-VGTGTV 276
D +A + + + E+ E++ G D YGW+F + +A VG G+V
Sbjct: 190 DRPLGVAVRTYFRTERHDDDWMESHLELWDGPPGKSDLLPGYGWIFGLGNGLANVGLGSV 249
Query: 277 THKGDIKKFQLATRNRAKDKILGGKI----------IRVEAHPIPEHPRPRRLSGRVALV 326
+ + + + + G+ +R A P+ + P G + LV
Sbjct: 250 SSTARATQLDYKSLFSRWMQNVPGEWGFTPENQVGDLRSAALPMAFNRTPHYTRG-LLLV 308
Query: 327 GDAAGYVTKCSGEGIYFAAKSGRMCAEAIIE 357
GD+ G V+ +GEGI +A ++GR+ A+ + +
Sbjct: 309 GDSGGMVSPFNGEGIAYALQAGRVAADVVAQ 339
>gi|392392573|ref|YP_006429175.1| flavin-dependent dehydrogenase [Desulfitobacterium dehalogenans
ATCC 51507]
gi|390523651|gb|AFL99381.1| flavin-dependent dehydrogenase [Desulfitobacterium dehalogenans
ATCC 51507]
Length = 430
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 151/364 (41%), Gaps = 53/364 (14%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPLDI----ID 109
V+GGG AG AA LAK G+E L+ER K G E +P ++
Sbjct: 10 VVGGGIAGTVAAYLLAKEGLEVILVERGNYAGSKNMTGGRIYSHSLEKIMPYFAREAPVE 69
Query: 110 RKVTKMK---MISPSNVAVDIGQTL----KPHEYIGMVRREVLDAYLRERAEKNGASVIN 162
RK+T+ K M SNV +D +L Y V R V D +L E+AE+ G +I
Sbjct: 70 RKITREKISLMTEESNVTLDFYSSLLGVQGSDSY--SVLRGVFDQWLAEKAEEAGVQIIP 127
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN---- 218
G+ + DL +L + G G E LE D I ADG NS +A+ +
Sbjct: 128 GIRVD-DL--------ILREGKVCGVVAGEDE---LEADITILADGVNSLLAQKLGFRGE 175
Query: 219 AGDYDYAIAFQERVKIPDEKMVY------YENLAEMYVGDDVSPDFYGWVFPKCDHVAVG 272
+ A+ +E +++P + E A ++ G S G F + ++
Sbjct: 176 LATHHVAVGAKEIIELPSRVIEERFNCNGNEGTAWLFAGSP-SDGRVGGGFLYTNKSSIS 234
Query: 273 TGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR---PRRLS 320
G VT D+ K +D I GK+I H +PE P+ +
Sbjct: 235 LGVVTTLSDVIKGNKTVPQMLEDFKQHPSIQPLIKDGKMIEYSGHLVPEAGLAMIPKIVG 294
Query: 321 GRVALVGDAAGYVTKCS--GEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKW 378
V +VGDAAG+ G+ FA S A+A+++ E + EG L+ Y
Sbjct: 295 NGVLVVGDAAGFCINLGYMVRGMDFAVASAECAAKAVLKAKE--AQDFSEGYLQCYQGLL 352
Query: 379 DKTY 382
D+++
Sbjct: 353 DQSF 356
>gi|432543153|ref|ZP_19780004.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE236]
gi|432548635|ref|ZP_19785416.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE237]
gi|432621900|ref|ZP_19857934.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE76]
gi|432815394|ref|ZP_20049179.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE115]
gi|431075908|gb|ELD83428.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE236]
gi|431081864|gb|ELD88191.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE237]
gi|431159599|gb|ELE60143.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE76]
gi|431364450|gb|ELG50981.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE115]
Length = 429
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 138/319 (43%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDVLEANVVILADGVNSMLGR 168
Query: 216 S---INAGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S ++A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVSASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNDGVMIVGDAAGF 306
>gi|427717440|ref|YP_007065434.1| geranylgeranyl reductase [Calothrix sp. PCC 7507]
gi|427349876|gb|AFY32600.1| geranylgeranyl reductase [Calothrix sp. PCC 7507]
Length = 373
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 126/297 (42%), Gaps = 33/297 (11%)
Query: 69 LAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLD-IIDRKVTKMKMISPSNVAVD 126
LAK G ++E++ L KPCGG + + FD I KV + AV+
Sbjct: 20 LAKQGRSVLVVEKESLPRYKPCGGGVSPAIAQWFDFDFSPAISLKVDTFRCTLKMGDAVE 79
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----INGLFMKMDLPRNFEQPYVLY 181
L+ E + MVRREV D +L ++A+K GA + + G+ +K D +
Sbjct: 80 --NKLEIAEPVWMVRREVFDHFLVQQAQKQGAQLQDNTEVTGIELKTD--------HWQV 129
Query: 182 YTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVY 241
T ++ G R L I ADGA AK + D +A +IP
Sbjct: 130 NTAHEQFTG-----RYL-----IAADGAKGPTAKWLGFKDRKRRLAGALEAEIPAS---- 175
Query: 242 YENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGK 301
EN + + + Y W FPK D +VG GT + + ++ + + L K
Sbjct: 176 VENCSTFHFDFGTVKNGYIWNFPKADGYSVGVGTFIGN-EPQDYKKILTDYVHNIGLDVK 234
Query: 302 IIRVEAHPIPEHPRPRRLSGRVA-LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIE 357
+ +PI + ++L + A L G+AA V + EGI + SG + A AI E
Sbjct: 235 TCKQYGYPICQWDGNQKLHTQNAVLAGEAACIVDPFTAEGIRPSILSGLLAANAIHE 291
>gi|336477523|ref|YP_004616664.1| geranylgeranyl reductase [Methanosalsum zhilinae DSM 4017]
gi|335930904|gb|AEH61445.1| geranylgeranyl reductase [Methanosalsum zhilinae DSM 4017]
Length = 415
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 155/346 (44%), Gaps = 38/346 (10%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDI----- 107
V V+G GPAG AA+ A G++ LIE++ + P A VG+F+L I
Sbjct: 7 VVVVGAGPAGSIAAKNAALKGLDVLLIEKRQEIGDPVRCAEG---VGKFNLRQHIEPDPR 63
Query: 108 -IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----I 161
I + ++ SP +++ + + E ++ R+V D L A GA V
Sbjct: 64 WICADMKGSRIYSPDGTIIEMAEEIAGGEVGYVLERKVFDRALAFEAAVAGAEVQVKTRA 123
Query: 162 NGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGD 221
GL ++ R + ++ + GE+ T+ VI ADG S+VA+ AG
Sbjct: 124 TGLLIEDGFVRGVQ---LMQF----------GEEYTVRAKIVIAADGVESKVARW--AG- 167
Query: 222 YDYAIAFQERVKIPDEKMVYYE---NLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVT 277
D + ++ + E Y+G++V+P Y W+FPK + +A VG G +
Sbjct: 168 IDTTLKLKDIETCAQYLITGTEIDPGYCHFYLGNEVAPSGYIWIFPKGEKMANVGIGILG 227
Query: 278 HKGDIKKFQLATRNRAKDKIL-GGKIIRVEAHPIPEHPR-PRRLSGRVALVGDAAGYVTK 335
+ + ++ + NR +K + GKII + +P + ++ + +VGDAA
Sbjct: 228 SESNDQQRAIDYLNRFVEKNMPEGKIIEMVVGGVPVCGSIEKTIANGLMVVGDAARQSDP 287
Query: 336 CSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKT 381
+G GI A +G++ AE E E G + E L Y ++W T
Sbjct: 288 ITGGGIINAMDAGKIAAEVAAEAIEAGD--VSEKMLMNYEKRWKAT 331
>gi|432881936|ref|ZP_20098016.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE154]
gi|431411442|gb|ELG94553.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE154]
Length = 429
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 136/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFATSAPVERKVTREKISFLTEVSAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S+ A D + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
++ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 229 NNDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVIIVGDAAGF 306
>gi|21222942|ref|NP_628721.1| electron transfer oxidoreductase [Streptomyces coelicolor A3(2)]
gi|289769836|ref|ZP_06529214.1| electron transfer oxidoreductase [Streptomyces lividans TK24]
gi|5042280|emb|CAB44534.1| putative electron transfer oxidoreductase [Streptomyces coelicolor
A3(2)]
gi|289700035|gb|EFD67464.1| electron transfer oxidoreductase [Streptomyces lividans TK24]
Length = 430
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 162/380 (42%), Gaps = 46/380 (12%)
Query: 41 KTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCG-GAIPLCMV 98
+T P L+ V V+G GPAG A LA++G++ L+E+ K CG G P +
Sbjct: 4 ETEP-LSENTADVIVVGAGPAGSTTAYHLARSGLDVLLLEKTAFPREKVCGDGLTPRAVK 62
Query: 99 GEFDLPLDIIDR----KVTKMKMISP-SNVAVDIGQTLKPHEYIGMVR-REVLDAYLRER 152
+ +DI + + +++I S + +D +Y G+VR R+ D L +
Sbjct: 63 QLVAMGIDISEEAGWLRNKGLRIIGGGSRLQLDWPDLASFPDY-GLVRKRDDFDEQLARQ 121
Query: 153 AEKNGASVINGLFMKMDLPRNFEQPYVLYYT-EYDGTKGGVGEKR---TLEVDAVIGADG 208
A+K GA L+ + N P V T G +GE + T V+ ADG
Sbjct: 122 AQKAGAR----LYERC----NVGAPIVDDRTGRITGVHAKLGEDKREVTFHAPLVVAADG 173
Query: 209 ANSRVAKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDFYGW 261
++R++ ++ D +A + P Y E+ E++ D + P YGW
Sbjct: 174 NSTRLSLAMGLHRREDRPMGVAVRTYFTSPRHDDDYLESWLELWDRRGPQDRLLPG-YGW 232
Query: 262 VFPKCDHVA-VGTGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIRVEAH 308
VF D + VG G + K+ +A D + G IR A
Sbjct: 233 VFGMGDGTSNVGLGVLNTSAAFKELDWREILKAWCASMPEDWGYTPDNMTG--PIRGAAL 290
Query: 309 PIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDE 368
P+ + +P G + LVGDA G V +GEGI +A +SG++ A+ +++ T E
Sbjct: 291 PMAFNRQPHYTKG-LLLVGDAGGLVNPFNGEGIAYAMESGQIAADVVVQAHARATPAQRE 349
Query: 369 GDLRKYLEKWDKTYWPTYKV 388
L++Y TY Y +
Sbjct: 350 IALQRYPRVLKDTYGGYYNL 369
>gi|301026939|ref|ZP_07190333.1| FAD dependent oxidoreductase [Escherichia coli MS 69-1]
gi|419921034|ref|ZP_14439130.1| hypothetical protein ECKD2_23244 [Escherichia coli KD2]
gi|432792905|ref|ZP_20026990.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE78]
gi|432798863|ref|ZP_20032886.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE79]
gi|432850685|ref|ZP_20081380.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE144]
gi|300395249|gb|EFJ78787.1| FAD dependent oxidoreductase [Escherichia coli MS 69-1]
gi|388383344|gb|EIL45123.1| hypothetical protein ECKD2_23244 [Escherichia coli KD2]
gi|431339649|gb|ELG26703.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE78]
gi|431343730|gb|ELG30686.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE79]
gi|431400007|gb|ELG83389.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE144]
Length = 429
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 137/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDVLEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNDGVMIVGDAAGF 306
>gi|21674056|ref|NP_662121.1| geranylgeranyl hydrogenase BchP [Chlorobium tepidum TLS]
gi|21647207|gb|AAM72463.1| geranylgeranyl hydrogenase BchP, putative [Chlorobium tepidum TLS]
Length = 399
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 160/384 (41%), Gaps = 72/384 (18%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLC---MVGEFDLPLDIIDR 110
+ G GPAG +AA +LA+ G LI++ + K CG + ++ E + L+++ +
Sbjct: 8 ISGAGPAGCSAALSLAQKGRRVLLIDKARFPREKICGDGVTAASTELLEEMGV-LELLRQ 66
Query: 111 K---VTKMK---MISPSNVAVDIGQTLKPHEYIG---MVRREVLDAYLRERAEKNGA--- 158
+ +T+ + +SP V G+ L+ G ++ R VLD L R +++ +
Sbjct: 67 RPGSLTEFRGATFVSPGGTVVQ-GRILRNGHLSGSSYVIPRMVLDDSLVSRVKEHSSITF 125
Query: 159 ---SVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
+ + GL M D R G GE +I ADGA S +AK
Sbjct: 126 LDKTTVTGLVMDGDRAR--------------GVATSAGE---FCGRIIIAADGAYSPIAK 168
Query: 216 SINAGDYD-----YAI--AFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDH 268
++ + D +A+ F + D + Y+ M G YGW+FP +
Sbjct: 169 QLDLWNRDKRQQGFAMRAWFSGVEGLGDSIELCYDK--AMLPG-------YGWIFPAGEQ 219
Query: 269 VA-VGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIR---VEAHPIPEHPRP------RR 318
A VG + D + + ++ K+ ++ +E + P P RR
Sbjct: 220 RANVGVFLLPRFADQRSTKRLFKSFVKENAFAAARLKNAVMEPGSLKSWPLPFGSFAGRR 279
Query: 319 LSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKW 378
G V L GDA ++ +GEGIY+A K+GR AEA+ E R + L +Y + W
Sbjct: 280 GRGNVLLAGDAGSFIDPLTGEGIYYALKTGRYAAEAVANALE---RNDESAALTRYEQLW 336
Query: 379 -----DKTYWPTYKVLDVLQKVFY 397
+ Y+P Y + ++
Sbjct: 337 RGEFSGRVYFPGYAFQHFMNNSWF 360
>gi|409096440|ref|ZP_11216464.1| Geranylgeranyl reductase [Thermococcus zilligii AN1]
Length = 370
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 135/316 (42%), Gaps = 48/316 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPLCMVGEFDLPLDIIDRK 111
V +IGGGP G A TL ++ ++E+K K C G I E P + + +
Sbjct: 5 VLIIGGGPVGNYLA-TLLAGKLDVAVVEKKPSFGGKACTGIIGAESFEELGFPEEAVINE 63
Query: 112 VTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLP 171
+ S + +I + P Y+ V R+ L+ L + A K GA G
Sbjct: 64 LRGAVFYSKIQ-SFEI-ERKTPQAYV--VDRKTLERELAKEAIKRGADYFMG-------- 111
Query: 172 RNFEQPYVLYYTEYDGTKGG------VGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
T + G + G + E +E + +GADG S VAK I A
Sbjct: 112 -----------TTFTGFRDGKARLQHLNEAFEIEAEFYVGADGVASTVAKEIGAKSE--- 157
Query: 226 IAFQERVKIPDEKMV--YYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKGDI 282
E +K + ++V + + E++V +++P+F+ WV P D A VGT G++
Sbjct: 158 ---AEFLKGYEAEVVGNFRRDFTEVWVNRELNPEFFFWVAPVSDDTARVGT-----FGEL 209
Query: 283 KKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIY 342
+ F+ R A + I+ +A + R +SG VALVGDAA + + GI
Sbjct: 210 EVFR---RFLAGRGLKPTSIVEFKAGSVGLGWRKPWVSGNVALVGDAALQIKPTTAGGIV 266
Query: 343 FAAKSGRMCAEAIIEG 358
F A A AIIEG
Sbjct: 267 FGAICAHHLARAIIEG 282
>gi|325960085|ref|YP_004291551.1| geranylgeranyl reductase [Methanobacterium sp. AL-21]
gi|325331517|gb|ADZ10579.1| geranylgeranyl reductase [Methanobacterium sp. AL-21]
Length = 388
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 165/400 (41%), Gaps = 52/400 (13%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDIIDR 110
+AV+G GP G A +A NG+ ++E+K + P C G + + LP + +
Sbjct: 6 IAVVGAGPVGSTFARYVADNGLNVVMVEKKREIGIPLQCAGLLGQKIKEINVLPDEYVLN 65
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVI-NGLFMKMD 169
+V + SPSN + +G K + ++ R D YL A +GA ++ N + D
Sbjct: 66 QVRGAYIHSPSNNMMKVG---KENVQAYVIDRVGYDKYLANLAVDSGAELLMNHKVIHSD 122
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRT-LEVDAVIGADGANSRVAKSINAGDYDYAIA- 227
L G + K T ++ D ++GADG +S ++ + N + A
Sbjct: 123 L------------------NGCIETKETKIQADIIVGADGHSSTLSNNFNEKPRSFMAAQ 164
Query: 228 FQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA----VGTGTVTHKGDIK 283
+ IP V+ ++V D +SP F W P A T ++
Sbjct: 165 YLIETDIP----VFDLENVHLHVDDLISPGFL-WTIPLTSSTARIGLFADMNYTELNNVL 219
Query: 284 KFQLATRNRAKDKILGGKIIRVEAHPIPEH-PRPRRLSGRVALVGDAAGYVTKCSGEGIY 342
+AT K+ +II+ IP++ P+ + + + L+GDAA V +G G+
Sbjct: 220 AKLMATEPMFKN----ARIIQKYQGYIPKYDPKKKIVDEKTILLGDAASQVKPTTGGGLL 275
Query: 343 FAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSN-- 400
G CA+ E + M D L++Y + K + +V +QK+F N
Sbjct: 276 I----GFECAKIAAECATKAVEMEDISYLKEYENQISKRFRNELRVQIEVQKIFESMNNQ 331
Query: 401 PAREAFVEM---CADEYVQK---MTFDSYLYKRVVPGNPL 434
E F ++ A+E + K M S L K ++ L
Sbjct: 332 DLDEMFTKLKQGNAEELISKYGDMDTQSTLIKEMIKNGLL 371
>gi|22298947|ref|NP_682194.1| geranylgeranyl bacteriochlorophyll reductase [Thermosynechococcus
elongatus BP-1]
gi|22295128|dbj|BAC08956.1| tll1404 [Thermosynechococcus elongatus BP-1]
Length = 378
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 39/298 (13%)
Query: 69 LAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLD-IIDRKVTKMKMISPSNVAVD 126
LAK G ++E++ L KPCGG + + FD I KVT+M A
Sbjct: 20 LAKRGRRVLVLEKEALPRYKPCGGGVSPQVQSWFDFDFSPAISLKVTQMVCTWQGEEAQL 79
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----INGLFMKMDLPRNFEQPYVLY 181
+ P + + MVRR+V D +L ++A++ GA + + GL D P +
Sbjct: 80 L--EFPPEQPMWMVRRDVFDYFLIQQAQRQGAELRPQTPVTGLTWGGDR-WQVHTPSGDF 136
Query: 182 YTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAI--AFQERVKIPDEKM 239
+Y +IG DGA +AK + D + A + +PD +
Sbjct: 137 TAQY-----------------LIGCDGAKGSMAKWLGFKDRQQRVGAAIEIEAAMPDHSL 179
Query: 240 V-YYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKIL 298
+ + ++ G Y W FPK D ++G GTV G + + AK +
Sbjct: 180 TAAHFDFGRLHNG-------YIWNFPKRDGYSIGVGTVA-LGRKQNLRAIGAEYAKTFGV 231
Query: 299 GGKIIRVEAHPIPEHPRPRRLSGRVALV-GDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
++V HP+ + +RL + AL+ G+AA V + EGI + +G + A+AI
Sbjct: 232 DFNQVKVYGHPLYCWQQHQRLHTQNALLAGEAACVVDPFTAEGIRPSLLTGMLAAQAI 289
>gi|432602220|ref|ZP_19838464.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE66]
gi|431140794|gb|ELE42559.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE66]
Length = 429
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 137/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDVLEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNDGVMIVGDAAGF 306
>gi|386619268|ref|YP_006138848.1| Putative electron transfer flavoprotein-quinone oxidoreductase
[Escherichia coli NA114]
gi|387829612|ref|YP_003349549.1| putative flavoprotein FixC [Escherichia coli SE15]
gi|432421964|ref|ZP_19664512.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE178]
gi|432500059|ref|ZP_19741819.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE216]
gi|432558786|ref|ZP_19795464.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE49]
gi|432694450|ref|ZP_19929657.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE162]
gi|432710612|ref|ZP_19945674.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE6]
gi|432919124|ref|ZP_20123255.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE173]
gi|432926931|ref|ZP_20128471.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE175]
gi|432981110|ref|ZP_20169886.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE211]
gi|433096525|ref|ZP_20282722.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE139]
gi|433105889|ref|ZP_20291880.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE148]
gi|281178769|dbj|BAI55099.1| putative flavoprotein FixC [Escherichia coli SE15]
gi|333969769|gb|AEG36574.1| Putative electron transfer flavoprotein-quinone oxidoreductase
[Escherichia coli NA114]
gi|430944723|gb|ELC64812.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE178]
gi|431028929|gb|ELD41961.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE216]
gi|431091837|gb|ELD97545.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE49]
gi|431234649|gb|ELF30043.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE162]
gi|431249404|gb|ELF43559.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE6]
gi|431444438|gb|ELH25460.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE173]
gi|431445158|gb|ELH26085.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE175]
gi|431491865|gb|ELH71468.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE211]
gi|431616786|gb|ELI85809.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE139]
gi|431629113|gb|ELI97479.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE148]
Length = 429
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 134/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN----AGDYDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S+ + + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVSASNPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
+ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 229 NKDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVMIVGDAAGF 306
>gi|432465690|ref|ZP_19707781.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE205]
gi|433072811|ref|ZP_20259477.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE129]
gi|433120241|ref|ZP_20305920.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE157]
gi|433183260|ref|ZP_20367526.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE85]
gi|430994171|gb|ELD10502.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE205]
gi|431589374|gb|ELI60589.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE129]
gi|431643999|gb|ELJ11686.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE157]
gi|431708150|gb|ELJ72674.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE85]
Length = 429
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 134/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN----AGDYDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S+ + + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVSASNPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
+ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 229 NKDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVMIVGDAAGF 306
>gi|383645144|ref|ZP_09957550.1| electron transfer oxidoreductase [Streptomyces chartreusis NRRL
12338]
Length = 427
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 158/369 (42%), Gaps = 45/369 (12%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVGEFDL 103
L+ V V+G GPAG A LAK G++ L+E+ + K CG G P + +
Sbjct: 5 LSENTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTEFPREKVCGDGLTPRAVKQLVAM 64
Query: 104 PLDIIDR----KVTKMKMISPS-NVAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNG 157
+DI + + +++I + +D +Y G+VR R+ D L +A+K G
Sbjct: 65 GIDISEEAGWLRNKGLRIIGGGVRLQLDWPDLASFPDY-GLVRKRDDFDEQLARQAQKAG 123
Query: 158 ASVINGLFMKMDLPRNFEQPYVLYYT-EYDGTKGGVGEKR---TLEVDAVIGADGANSRV 213
A LF + N P + T G +GE++ T V+ ADG ++R+
Sbjct: 124 AR----LFERC----NVGAPILDDRTGRITGVHAKLGEEKREVTFRAPLVVAADGNSTRL 175
Query: 214 AKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDFYGWVFPKC 266
+ ++ D +A + P + Y E+ E++ D + P YGW+F
Sbjct: 176 SLAMGLHRREDRPMGVAVRTYFTSPRHEDDYLESWLELWDRRGPVDRLLPG-YGWIFGMG 234
Query: 267 DHVA-VGTGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIRVEAHPIPEH 313
D + VG G + K+ +A D + G IR A P+ +
Sbjct: 235 DGTSNVGLGVLNTSDSFKELDWREVLKAWCASMPEDWGYTPDNMTG--PIRGAALPMAFN 292
Query: 314 PRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRK 373
+P G + LVGDA G V +GEGI +A +SG++ A+ I++ T E L++
Sbjct: 293 RQPHYTKG-LLLVGDAGGLVNPFNGEGIAYAMESGQIAADVIVQAHARATPAGREMALQR 351
Query: 374 YLEKWDKTY 382
Y TY
Sbjct: 352 YPRVLKDTY 360
>gi|268325696|emb|CBH39284.1| conserved hypothetical protein containing FAD binding domain
[uncultured archaeon]
Length = 409
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 112/267 (41%), Gaps = 41/267 (15%)
Query: 133 PHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGV 192
P + +RR++ D L + A+K GA +I L ++ L + +G
Sbjct: 88 PDKCAFAIRRDIFDNVLAQEAQKEGAEII--LRRRVKSVTKGPGETKLRISTANG----- 140
Query: 193 GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPD--EKMVYYENLAEMYV 250
K + VIGADG S+VAK A +F V++ E + + AE++V
Sbjct: 141 --KEEISARVVIGADGVKSKVAK---MAGLSVARSFLNCVQVEGVYETEDAFADFAEIFV 195
Query: 251 GDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDI--KKFQLAT-------RNRAKDKILG-- 299
G+ ++P F+ W P +G + G K+F + RN A+ IL
Sbjct: 196 GNTIAPGFFAWAIP------LGAENIARIGLCIDKRFSAQSNPLLYLKRNLAEHPILAKR 249
Query: 300 --GKIIRVEAHPIPEHPRPR----RLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAE 353
G ++ A IP R R R+ + LVGDAA V +G G+Y+ K G+M E
Sbjct: 250 YKGARSKLTAGTIPIGVRKRGRTVRVDKGILLVGDAAAQVKPVTGGGVYYGLKCGKMAGE 309
Query: 354 AIIEGSENGTRMIDEGDLRKYLEKWDK 380
+ S G D L Y +W K
Sbjct: 310 IAAKASLTG----DLKMLTAYERRWRK 332
>gi|433609757|ref|YP_007042126.1| Geranylgeranyl reductase [Saccharothrix espanaensis DSM 44229]
gi|407887610|emb|CCH35253.1| Geranylgeranyl reductase [Saccharothrix espanaensis DSM 44229]
Length = 425
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 144/343 (41%), Gaps = 61/343 (17%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVGEFDLPLDIIDR 110
V V+G GPAG AA LA+ G++ L+E+ K K CG G P + DL +D +
Sbjct: 15 VIVVGAGPAGSTAATYLARAGLDVLLLEKSKFPREKVCGDGLTPRGVKQLVDLGIDTREE 74
Query: 111 KV---TKMKMISPSNVAVDIG----QTLKPHEYIGMVR-REVLDAYLRERAEKNGASVIN 162
+ + V +++ T P+ G+VR R+ D L A++ GA
Sbjct: 75 AGWLHNRGLRVVGGGVTLELDWPDLATFPPY---GVVRPRQDFDEMLARTAQQAGA---- 127
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKR-------TLEVDAVIGADGANSRVAK 215
R FEQ V G GV K T VIG DG ++R+A
Sbjct: 128 ---------RLFEQTTVTGAITERGRVVGVTAKTGPDKREVTYRAPIVIGCDGVSARLAL 178
Query: 216 SINAGDYD---YAIAFQERVKIPDEKMVYYENLAEMY-VGDDVSPDFYGWVFPKCD---H 268
S+ D +A + P K Y E+ E++ +DV YGW+F D +
Sbjct: 179 SVGIQKDDGKPMGVAVRRYYASPRTKDDYLESHLELWDRENDVLLPGYGWIFGMGDGTVN 238
Query: 269 VAVGT-------GTVTHKGDIKKFQLAT-------RNRAKDKILGGKIIRVEAHPIPEHP 314
V +G GT ++ +K + T A KI G A P+ +
Sbjct: 239 VGLGILSTSKAYGTTDYRALLKSWLDGTPEEWGFREENATGKIGG------AALPMGLNR 292
Query: 315 RPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIE 357
+P G + LVGDA G V +GEGI +A +S R+ AE +++
Sbjct: 293 KPHYRDG-LLLVGDAGGMVNPFNGEGIGYAMESARIAAECVVQ 334
>gi|332981977|ref|YP_004463418.1| geranylgeranyl reductase [Mahella australiensis 50-1 BON]
gi|332699655|gb|AEE96596.1| geranylgeranyl reductase [Mahella australiensis 50-1 BON]
Length = 388
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 124/311 (39%), Gaps = 48/311 (15%)
Query: 71 KNGVETFLIERK-LDNCKPCGGAIPLCMVGE--FDLPLDIIDRKVTKMKMISPSNVAVDI 127
+ G+ L+++ K CGG + + E F+LP +++ +V K+++
Sbjct: 23 EGGLSVLLLDKAVFPRDKTCGGMLSAKTLDELGFELPDELMQHEVHKVRVY--------- 73
Query: 128 GQTLKPHEY-----IG-MVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLY 181
G L E+ IG V+R D +L +A GA I G +
Sbjct: 74 GYNLDSSEWDEKRTIGKAVKRRHFDDFLVHKAIDTGAYFIEGAKL--------------- 118
Query: 182 YTEYDGTKGGV---GEKRTLEVDAVIGADGANSRVAKSINAGD----YDYAIAFQERVKI 234
T D G+ + VIGADG S A + + V++
Sbjct: 119 -TAIDQNSTGIVIRTSRGCFSARYVIGADGVFSPTAALAGIHGRLPVWQMGFTMEAEVQV 177
Query: 235 PDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV--THKGDIKKFQLATRNR 292
P Y AE Y + +GW FP+ D +G G V HK F
Sbjct: 178 PVLNSDY--GTAEFYFIPFLGG--FGWAFPQKDGYNIGVGGVAWNHKRLTSYFYEFAERI 233
Query: 293 AKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSGEGIYFAAKSGRMC 351
K K + + + + +P PRR+S + L GDAAG+V SGEGIY+A SG +
Sbjct: 234 LKYKGINAPVPKAKGCFLPAGGIPRRISKSNIVLAGDAAGFVDPFSGEGIYYALHSGHIA 293
Query: 352 AEAIIEGSENG 362
A+ ++E E G
Sbjct: 294 AQTLLEVIEAG 304
>gi|432868900|ref|ZP_20089695.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE147]
gi|431410816|gb|ELG93959.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE147]
Length = 429
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 137/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDVLEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNEGVMIVGDAAGF 306
>gi|347524033|ref|YP_004781603.1| geranylgeranyl reductase [Pyrolobus fumarii 1A]
gi|343460915|gb|AEM39351.1| geranylgeranyl reductase [Pyrolobus fumarii 1A]
Length = 452
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 142/341 (41%), Gaps = 55/341 (16%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIE-RKLDNC--KPCG---GAIPLCMVGEFDLP 104
V + GGGPAG AA LA+ G L E R DN KPCG GA G + P
Sbjct: 7 FEVLIAGGGPAGTVAAYHLARMGFNVALFEIRGWDNVWGKPCGDAIGAHHFPNAGLPEPP 66
Query: 105 LDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
++I K+ + + SPS ++ ++ YI + R L +L AE+ GA +
Sbjct: 67 SEVIHNKIDGVLIYSPS---LETVYRVRGEGYI--IDRRGLGRWLLREAERRGAQIF--- 118
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGV------GEKRTLEVDAVIGADGANSRVAKSIN 218
L + E P V +G G+ GE + VI A G + V + +
Sbjct: 119 -----LESSVEAPIV-----ENGRVAGLRVRLKSGEHLECRGNIVIEATGYSMVVKRGL- 167
Query: 219 AGDYDYAIAFQERVKIPDEKMVYYE-----------NLAEMYVGDDVSPDFYGWVFPKCD 267
D+ +A ER+ + D + Y E N +Y+ +++P Y W+FP+
Sbjct: 168 --PRDWPVA--ERLDMKDTNIAYREVQELSDEVEEPNYIRIYINQEIAPGGYWWLFPEGK 223
Query: 268 HVA-VGTGTVTHKGDI---KKF-QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR 322
+V +G G G+ ++F QL R A ++I +P L G
Sbjct: 224 NVINIGLGVQGGVGNPHPRQQFTQLYERGLAPPP---RRVIEAGGAVVPTRRPADTLVGP 280
Query: 323 VALV-GDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENG 362
LV GDA V G GI +A + R+ AEA E + G
Sbjct: 281 GLLVIGDAGFTVNPVHGGGIGYAFYAARLAAEAYKEAHDKG 321
>gi|116623341|ref|YP_825497.1| geranylgeranyl reductase [Candidatus Solibacter usitatus Ellin6076]
gi|116226503|gb|ABJ85212.1| geranylgeranyl reductase [Candidatus Solibacter usitatus Ellin6076]
Length = 390
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 143/326 (43%), Gaps = 63/326 (19%)
Query: 52 RVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLD--IID 109
RVA++GGGPAG AAETLA G+ L++ KL KPCGG + ++ ++
Sbjct: 3 RVAILGGGPAGAFAAETLASAGLGVILMDEKLAWEKPCGGGLTHKAYSQYPFLIENSTPK 62
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
R VT+ + +P V TL+ + + + R L+ L ERAE+ GA + M+M+
Sbjct: 63 RLVTETVLAAPKAGEV----TLQLGDPLLIYSRLDLNRMLLERAERAGAQIEKTRVMEMN 118
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRT----LEVDAVIGADGANS---RVAKSINAGDY 222
KG + RT L+ D I A GA + V + D
Sbjct: 119 ------------------RKGSGWQLRTAAGNLDADFCIVATGARNPLRDVGTQLTPPDT 160
Query: 223 DYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYG--WVFPKCDHVAVGTGTVTHKG 280
A+ YY + + PD G W+FP+C H+++G + KG
Sbjct: 161 MAALG-------------YYVQGDQARIDIQFLPDLEGYIWIFPRCGHLSIG---ICGKG 204
Query: 281 DIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRP---------RRLSGRVAL-VGDAA 330
+ + R R + + G+ I + H P R+SG + VGDAA
Sbjct: 205 EPAS---SLRKRL-EAYMAGRGINWKGAAFYSHLLPSLDTKSWKQNRVSGEGWMAVGDAA 260
Query: 331 GYVTKCSGEGIYFAAKSGRMCAEAII 356
G V +GEG+Y+A +S + A++++
Sbjct: 261 GLVDPITGEGLYYAIRSADLAAQSLL 286
>gi|30063034|ref|NP_837205.1| hypothetical protein S1649 [Shigella flexneri 2a str. 2457T]
gi|30041283|gb|AAP17012.1| flavoprotein [Shigella flexneri 2a str. 2457T]
Length = 429
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 137/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDI--GQTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D GQ P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHRGQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMAGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNEGVMIVGDAAGF 306
>gi|408530029|emb|CCK28203.1| electron transfer oxidoreductase [Streptomyces davawensis JCM 4913]
Length = 428
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 160/374 (42%), Gaps = 47/374 (12%)
Query: 42 TSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVG 99
T P L++ + V V+G GPAG A LAK G++ L+E+ + K CG G P +
Sbjct: 2 TEPLLSDNSADVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTEFPREKVCGDGLTPRAVKQ 61
Query: 100 EFDLPLDIIDR----KVTKMKMISPS-NVAVDIGQTLKPHEYIGMVR-REVLDAYLRERA 153
+ +DI + + ++++ + +D +Y G+VR R+ D L +A
Sbjct: 62 LVAMGIDISEEAGWLRNKGLRIVGGGVRLQLDWPDLASFPDY-GLVRKRDDFDEQLARQA 120
Query: 154 EKNGASVINGLFMKMDLPRNFEQPYVLYYT-EYDGTKGGVGE-KRTLEVDA--VIGADGA 209
+K GA + N P + T G +GE KR + A V+ ADG
Sbjct: 121 QKAGARLYERC--------NVGAPIIDERTGRITGVHAKLGEEKREVAFHAPLVVAADGN 172
Query: 210 NSRVAKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPD-----FYGW 261
++R++ ++ D +A + + P Y E+ E++ D P+ YGW
Sbjct: 173 STRLSLAMGLHRREDRPMGVAVRTYFESPRHDDDYLESWLELW--DRRGPEDRLLPGYGW 230
Query: 262 VFPKCDHVA-VGTGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIRVEAH 308
+F D VG G + K+ +A + + G IR A
Sbjct: 231 IFGMGDGTCNVGLGVLNTSDSFKELDWREVLKAWCASMPEDWGYTPEHMTG--PIRGAAL 288
Query: 309 PIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDE 368
P+ + +P G + LVGDA G V +GEGI +A +SG++ A+ I++ T E
Sbjct: 289 PMAFNRQPHYTKG-LLLVGDAGGLVNPFNGEGIAYAMESGQIAADVIVQAHARSTPSGRE 347
Query: 369 GDLRKYLEKWDKTY 382
L++Y TY
Sbjct: 348 LALQRYPRVLKDTY 361
>gi|325295578|ref|YP_004282092.1| geranylgeranyl reductase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325066026|gb|ADY74033.1| geranylgeranyl reductase [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 371
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 99/232 (42%), Gaps = 30/232 (12%)
Query: 194 EKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDD 253
+K + +I ADG NS+VA+ + K+ + YE E D+
Sbjct: 134 DKDIYKAKVIIVADGVNSKVAR---------------QFKVKRDIGFTYEADIEHSWNDN 178
Query: 254 VSPDF------YGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEA 307
+ DF Y W+FPK D + G G + K K +L NR + GKI
Sbjct: 179 ILIDFSDFSWGYYWIFPKGDFITTGLGELKRKAFDLKEKLFRFNRKFG--IEGKIKHQSG 236
Query: 308 HPIPEHPRPRRL-SGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMI 366
PIP + V +GDA G V +GEGIY+A KSG + AE +++ E G I
Sbjct: 237 FPIPVGKTKNDVYRNNVLFLGDAGGLVDPFTGEGIYYAVKSGVISAEIVMKAFEKGNLDI 296
Query: 367 DEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKM 418
L+ Y E D++ + + +F+R R F + + +QK+
Sbjct: 297 ----LKLYKELIDESMGKEFFWARTVGNLFFRFK--RLNFYVLEKEPSIQKL 342
>gi|331673254|ref|ZP_08374022.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli TA280]
gi|331069452|gb|EGI40839.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli TA280]
Length = 429
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 137/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMAQAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNDGVMIVGDAAGF 306
>gi|333909969|ref|YP_004483702.1| geranylgeranyl reductase [Methanotorris igneus Kol 5]
gi|333750558|gb|AEF95637.1| geranylgeranyl reductase [Methanotorris igneus Kol 5]
Length = 383
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 142/337 (42%), Gaps = 38/337 (11%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V ++GGGP G E++ + V + + C G I V E P +++
Sbjct: 8 VVIVGGGPIGCITGESIKNHNVLIVEEHQSIGVPLQCAGLISKKGVEELGNPKGCVNK-- 65
Query: 113 TKMKMISPSNVAVDIG-QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLP 171
+ I N V+IG + ++ + + R+V+D + RA K ++ L
Sbjct: 66 IRGAYIHAKNTTVNIGNEEIRAYVF----ERKVMDKDIAIRASKR----VDFLLKTYGRI 117
Query: 172 RNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSI---NAGDYDYAIAF 228
+ E Y L +GE+ + +IGADGA S + KS+ N + + +
Sbjct: 118 KIEENKYKLILNH-------MGEEFEISPKVIIGADGAKSTIGKSVGLVNNKNREILSSC 170
Query: 229 Q-ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVGTGTVTHKGDIKKFQ 286
Q E V + + ++ +++ D S +F+ W+ P D V VG + KG+ K
Sbjct: 171 QFEMVNVNVD-----DDFVHVFIDKDYSKEFFIWIIPMGKDRVRVG---LCDKGNCYKKL 222
Query: 287 LATRNR---AKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYF 343
L N AK+ + I +P + + V LVGDAAG V +G G+Y+
Sbjct: 223 LDFINNHPTAKEILKNATITEFSVGTLP-IGYSKTVKNNVLLVGDAAGQVKPLTGGGLYY 281
Query: 344 AAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDK 380
AK ++C + + E N D L+ Y + W K
Sbjct: 282 GAKCAKICGKIVDEYLSNDY---DLNYLKNYEKLWKK 315
>gi|209919014|ref|YP_002293098.1| hypothetical protein ECSE_1823 [Escherichia coli SE11]
gi|300818337|ref|ZP_07098547.1| FAD dependent oxidoreductase [Escherichia coli MS 107-1]
gi|331668385|ref|ZP_08369233.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli TA271]
gi|415873489|ref|ZP_11540709.1| ABC transporter, ATP-binding protein [Escherichia coli MS 79-10]
gi|417222549|ref|ZP_12025989.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 96.154]
gi|417265840|ref|ZP_12053209.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 3.3884]
gi|417602283|ref|ZP_12252853.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli STEC_94C]
gi|422355546|ref|ZP_16436260.1| FAD dependent oxidoreductase [Escherichia coli MS 117-3]
gi|422774405|ref|ZP_16828061.1| FAD dependent oxidoreductase [Escherichia coli H120]
gi|423705688|ref|ZP_17680071.1| hypothetical protein ESTG_00164 [Escherichia coli B799]
gi|432376851|ref|ZP_19619848.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE12]
gi|432805753|ref|ZP_20039692.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE91]
gi|432834696|ref|ZP_20068235.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE136]
gi|432934319|ref|ZP_20133857.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE184]
gi|433193674|ref|ZP_20377674.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE90]
gi|209912273|dbj|BAG77347.1| putative flavoprotein FixC [Escherichia coli SE11]
gi|300528977|gb|EFK50039.1| FAD dependent oxidoreductase [Escherichia coli MS 107-1]
gi|323948110|gb|EGB44101.1| FAD dependent oxidoreductase [Escherichia coli H120]
gi|324016502|gb|EGB85721.1| FAD dependent oxidoreductase [Escherichia coli MS 117-3]
gi|331063579|gb|EGI35490.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli TA271]
gi|342930696|gb|EGU99418.1| ABC transporter, ATP-binding protein [Escherichia coli MS 79-10]
gi|345349949|gb|EGW82224.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli STEC_94C]
gi|385713080|gb|EIG50016.1| hypothetical protein ESTG_00164 [Escherichia coli B799]
gi|386202351|gb|EII01342.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 96.154]
gi|386231833|gb|EII59180.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 3.3884]
gi|430899143|gb|ELC21248.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE12]
gi|431355447|gb|ELG42155.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE91]
gi|431385056|gb|ELG69043.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE136]
gi|431453851|gb|ELH34233.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE184]
gi|431717501|gb|ELJ81598.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE90]
Length = 429
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 45/310 (14%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP----LDIID 109
V+G G AG AA +A+ G++ +IER CK G E +P ++
Sbjct: 10 VVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVE 69
Query: 110 RKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
RKVT+ K + S V +D Q P V R LD +L E+AE+ GA I G+
Sbjct: 70 RKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGV 129
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN---AGD 221
++D V + G + G LE + VI ADG NS + +S+ A D
Sbjct: 130 --RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGRSLGMVPASD 177
Query: 222 -YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTG 274
+ YA+ +E + + E+ + E A ++ G S G F + ++ G
Sbjct: 178 PHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLYTNKDSISLG 236
Query: 275 TVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR---PRRLSGR 322
V GDI Q + +D I GGK++ AH +PE P+ ++
Sbjct: 237 LVCGLGDIAHTQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQMVNDG 296
Query: 323 VALVGDAAGY 332
V +VGDAAG+
Sbjct: 297 VMIVGDAAGF 306
>gi|425288567|ref|ZP_18679436.1| FAD dependent oxidoreductase [Escherichia coli 3006]
gi|432531070|ref|ZP_19768100.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE233]
gi|408215145|gb|EKI39549.1| FAD dependent oxidoreductase [Escherichia coli 3006]
gi|431055011|gb|ELD64575.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE233]
Length = 429
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 136/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEHAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVCEGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNDGVMIVGDAAGF 306
>gi|218554267|ref|YP_002387180.1| hypothetical protein ECIAI1_1753 [Escherichia coli IAI1]
gi|417596823|ref|ZP_12247472.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli 3030-1]
gi|417608244|ref|ZP_12258751.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli STEC_DG131-3]
gi|419226727|ref|ZP_13769595.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC9A]
gi|419232254|ref|ZP_13775035.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC9B]
gi|419237847|ref|ZP_13780574.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC9C]
gi|419243285|ref|ZP_13785926.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC9D]
gi|419249099|ref|ZP_13791688.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC9E]
gi|422760950|ref|ZP_16814709.1| FAD dependent oxidoreductase [Escherichia coli E1167]
gi|425422398|ref|ZP_18803579.1| electron-transferring-flavoprotein dehydrogenase [Escherichia coli
0.1288]
gi|433092106|ref|ZP_20278381.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE138]
gi|218361035|emb|CAQ98610.1| putative oxidoreductase subunit with FAD/NAD(P)-binding domain
[Escherichia coli IAI1]
gi|324119184|gb|EGC13072.1| FAD dependent oxidoreductase [Escherichia coli E1167]
gi|345355736|gb|EGW87945.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli 3030-1]
gi|345359785|gb|EGW91960.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli STEC_DG131-3]
gi|378076722|gb|EHW38724.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC9A]
gi|378078747|gb|EHW40726.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC9B]
gi|378085260|gb|EHW47153.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC9C]
gi|378091893|gb|EHW53720.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC9D]
gi|378096472|gb|EHW58242.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC9E]
gi|408344987|gb|EKJ59333.1| electron-transferring-flavoprotein dehydrogenase [Escherichia coli
0.1288]
gi|431611088|gb|ELI80368.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE138]
Length = 429
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 45/310 (14%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP----LDIID 109
V+G G AG AA +A+ G++ +IER CK G E +P ++
Sbjct: 10 VVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVE 69
Query: 110 RKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
RKVT+ K + S V +D Q P V R LD +L E+AE+ GA I G+
Sbjct: 70 RKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGV 129
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN---AGD 221
++D V + G + G LE + VI ADG NS + +S+ A D
Sbjct: 130 --RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGRSLGMVPASD 177
Query: 222 -YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTG 274
+ YA+ +E + + E+ + E A ++ G S G F + ++ G
Sbjct: 178 PHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLYTNKDSISLG 236
Query: 275 TVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR---PRRLSGR 322
V GDI Q + +D I GGK++ AH +PE P+ ++
Sbjct: 237 LVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQMVNDG 296
Query: 323 VALVGDAAGY 332
V +VGDAAG+
Sbjct: 297 VMIVGDAAGF 306
>gi|218695261|ref|YP_002402928.1| hypothetical protein EC55989_1867 [Escherichia coli 55989]
gi|293446073|ref|ZP_06662495.1| oxidoreductase FixC [Escherichia coli B088]
gi|332279151|ref|ZP_08391564.1| oxidoreductase, FAD/NAD(P)-binding domain-containing protein
[Shigella sp. D9]
gi|407469449|ref|YP_006784109.1| oxidoreductase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407481889|ref|YP_006779038.1| oxidoreductase [Escherichia coli O104:H4 str. 2011C-3493]
gi|410482439|ref|YP_006769985.1| oxidoreductase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|415826429|ref|ZP_11513567.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli OK1357]
gi|417131939|ref|ZP_11976724.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 5.0588]
gi|417155055|ref|ZP_11993184.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 96.0497]
gi|417240763|ref|ZP_12036930.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 9.0111]
gi|417581168|ref|ZP_12231973.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli STEC_B2F1]
gi|417667077|ref|ZP_12316625.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli STEC_O31]
gi|417805211|ref|ZP_12452167.1| oxidoreductase [Escherichia coli O104:H4 str. LB226692]
gi|417832935|ref|ZP_12479383.1| oxidoreductase [Escherichia coli O104:H4 str. 01-09591]
gi|417865482|ref|ZP_12510526.1| hypothetical protein C22711_2414 [Escherichia coli O104:H4 str.
C227-11]
gi|422987699|ref|ZP_16978475.1| hypothetical protein EUAG_04687 [Escherichia coli O104:H4 str.
C227-11]
gi|422994582|ref|ZP_16985346.1| hypothetical protein EUBG_02233 [Escherichia coli O104:H4 str.
C236-11]
gi|422999768|ref|ZP_16990522.1| hypothetical protein EUEG_02185 [Escherichia coli O104:H4 str.
09-7901]
gi|423003381|ref|ZP_16994127.1| hypothetical protein EUDG_00865 [Escherichia coli O104:H4 str.
04-8351]
gi|423009895|ref|ZP_17000633.1| hypothetical protein EUFG_02232 [Escherichia coli O104:H4 str.
11-3677]
gi|423019124|ref|ZP_17009833.1| hypothetical protein EUHG_02234 [Escherichia coli O104:H4 str.
11-4404]
gi|423024290|ref|ZP_17014987.1| hypothetical protein EUIG_02235 [Escherichia coli O104:H4 str.
11-4522]
gi|423030107|ref|ZP_17020795.1| hypothetical protein EUJG_00866 [Escherichia coli O104:H4 str.
11-4623]
gi|423037939|ref|ZP_17028613.1| hypothetical protein EUKG_02216 [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423043060|ref|ZP_17033727.1| hypothetical protein EULG_02235 [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423044799|ref|ZP_17035460.1| hypothetical protein EUMG_04391 [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423053332|ref|ZP_17042140.1| hypothetical protein EUNG_01738 [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423060298|ref|ZP_17049094.1| hypothetical protein EUOG_02238 [Escherichia coli O104:H4 str.
11-4632 C5]
gi|429719154|ref|ZP_19254094.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. Ec11-9450]
gi|429724499|ref|ZP_19259367.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. Ec11-9990]
gi|429776197|ref|ZP_19308182.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. 11-02030]
gi|429780650|ref|ZP_19312597.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. 11-02033-1]
gi|429783237|ref|ZP_19315153.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. 11-02092]
gi|429790415|ref|ZP_19322284.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. 11-02093]
gi|429794377|ref|ZP_19326218.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. 11-02281]
gi|429798030|ref|ZP_19329834.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. 11-02318]
gi|429806450|ref|ZP_19338189.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. 11-02913]
gi|429810895|ref|ZP_19342596.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. 11-03439]
gi|429816335|ref|ZP_19347993.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. 11-04080]
gi|429821022|ref|ZP_19352636.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. 11-03943]
gi|429912697|ref|ZP_19378653.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. Ec11-9941]
gi|429913567|ref|ZP_19379515.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. Ec11-4984]
gi|429918609|ref|ZP_19384542.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. Ec11-5604]
gi|429924415|ref|ZP_19390329.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. Ec11-4986]
gi|429928354|ref|ZP_19394256.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. Ec11-4987]
gi|429934907|ref|ZP_19400794.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. Ec11-4988]
gi|429940577|ref|ZP_19406451.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. Ec11-5603]
gi|429948210|ref|ZP_19414065.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. Ec11-6006]
gi|429950855|ref|ZP_19416703.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. Ec12-0465]
gi|429954153|ref|ZP_19419989.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. Ec12-0466]
gi|432481043|ref|ZP_19723001.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE210]
gi|432765052|ref|ZP_19999491.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE48]
gi|218351993|emb|CAU97725.1| putative oxidoreductase subunit with FAD/NAD(P)-binding domain
[Escherichia coli 55989]
gi|291322903|gb|EFE62331.1| oxidoreductase FixC [Escherichia coli B088]
gi|323186154|gb|EFZ71509.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli OK1357]
gi|332101503|gb|EGJ04849.1| oxidoreductase, FAD/NAD(P)-binding domain-containing protein
[Shigella sp. D9]
gi|340733817|gb|EGR62947.1| oxidoreductase [Escherichia coli O104:H4 str. 01-09591]
gi|340740114|gb|EGR74339.1| oxidoreductase [Escherichia coli O104:H4 str. LB226692]
gi|341918771|gb|EGT68384.1| hypothetical protein C22711_2414 [Escherichia coli O104:H4 str.
C227-11]
gi|345339791|gb|EGW72216.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli STEC_B2F1]
gi|354865657|gb|EHF26086.1| hypothetical protein EUBG_02233 [Escherichia coli O104:H4 str.
C236-11]
gi|354869826|gb|EHF30234.1| hypothetical protein EUAG_04687 [Escherichia coli O104:H4 str.
C227-11]
gi|354870914|gb|EHF31314.1| hypothetical protein EUDG_00865 [Escherichia coli O104:H4 str.
04-8351]
gi|354874331|gb|EHF34702.1| hypothetical protein EUEG_02185 [Escherichia coli O104:H4 str.
09-7901]
gi|354881263|gb|EHF41593.1| hypothetical protein EUFG_02232 [Escherichia coli O104:H4 str.
11-3677]
gi|354891566|gb|EHF51794.1| hypothetical protein EUHG_02234 [Escherichia coli O104:H4 str.
11-4404]
gi|354894451|gb|EHF54645.1| hypothetical protein EUIG_02235 [Escherichia coli O104:H4 str.
11-4522]
gi|354896733|gb|EHF56902.1| hypothetical protein EUKG_02216 [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354899698|gb|EHF59842.1| hypothetical protein EUJG_00866 [Escherichia coli O104:H4 str.
11-4623]
gi|354901857|gb|EHF61981.1| hypothetical protein EULG_02235 [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354914522|gb|EHF74506.1| hypothetical protein EUOG_02238 [Escherichia coli O104:H4 str.
11-4632 C5]
gi|354919014|gb|EHF78969.1| hypothetical protein EUMG_04391 [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354919875|gb|EHF79814.1| hypothetical protein EUNG_01738 [Escherichia coli O104:H4 str.
11-4632 C4]
gi|386149793|gb|EIH01082.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 5.0588]
gi|386168144|gb|EIH34660.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 96.0497]
gi|386212407|gb|EII22852.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 9.0111]
gi|397785324|gb|EJK96174.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli STEC_O31]
gi|406777601|gb|AFS57025.1| oxidoreductase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407054186|gb|AFS74237.1| oxidoreductase [Escherichia coli O104:H4 str. 2011C-3493]
gi|407065484|gb|AFS86531.1| oxidoreductase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|429347943|gb|EKY84715.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. 11-02030]
gi|429350451|gb|EKY87182.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. 11-02033-1]
gi|429354624|gb|EKY91320.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. 11-02092]
gi|429364743|gb|EKZ01362.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. 11-02093]
gi|429372393|gb|EKZ08943.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. 11-02281]
gi|429374343|gb|EKZ10883.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. 11-02318]
gi|429380068|gb|EKZ16567.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. 11-02913]
gi|429384448|gb|EKZ20905.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. 11-03439]
gi|429386532|gb|EKZ22980.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. 11-03943]
gi|429394151|gb|EKZ30532.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. Ec11-9450]
gi|429394447|gb|EKZ30823.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. Ec11-9990]
gi|429396456|gb|EKZ32808.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. 11-04080]
gi|429407331|gb|EKZ43584.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. Ec11-4984]
gi|429410162|gb|EKZ46385.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. Ec11-4986]
gi|429418724|gb|EKZ54866.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. Ec11-4988]
gi|429426322|gb|EKZ62411.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. Ec11-5603]
gi|429426728|gb|EKZ62815.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. Ec11-4987]
gi|429431292|gb|EKZ67341.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. Ec11-5604]
gi|429440654|gb|EKZ76631.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. Ec11-6006]
gi|429444234|gb|EKZ80180.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. Ec12-0466]
gi|429449861|gb|EKZ85759.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. Ec12-0465]
gi|429453724|gb|EKZ89592.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli O104:H4 str. Ec11-9941]
gi|431007700|gb|ELD22511.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE210]
gi|431310813|gb|ELF98993.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE48]
Length = 429
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 45/310 (14%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP----LDIID 109
V+G G AG AA +A+ G++ +IER CK G E +P ++
Sbjct: 10 VVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVE 69
Query: 110 RKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
RKVT+ K + S V +D Q P V R LD +L E+AE+ GA I G+
Sbjct: 70 RKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGV 129
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN---AGD 221
++D V + G + G LE + VI ADG NS + +S+ A D
Sbjct: 130 --RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGRSLGMVPASD 177
Query: 222 -YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTG 274
+ YA+ +E + + E+ + E A ++ G S G F + ++ G
Sbjct: 178 PHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLYTNKDSISLG 236
Query: 275 TVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR---PRRLSGR 322
V GDI Q + +D I GGK++ AH +PE P+ ++
Sbjct: 237 LVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQMVNDG 296
Query: 323 VALVGDAAGY 332
V +VGDAAG+
Sbjct: 297 VMIVGDAAGF 306
>gi|455648939|gb|EMF27773.1| electron transfer oxidoreductase [Streptomyces gancidicus BKS
13-15]
Length = 427
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 158/369 (42%), Gaps = 45/369 (12%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVGEFDL 103
L++ V V+G GPAG A LA++G++ L+E+ + K CG G P + +
Sbjct: 5 LSDNTADVIVVGAGPAGSTTAYHLARSGLDVLLLEKTEFPREKVCGDGLTPRAVKQLVAM 64
Query: 104 PLDIIDR----KVTKMKMISPS-NVAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNG 157
+DI + + +++I + +D +Y G+VR R+ D L +A+K G
Sbjct: 65 GIDISEEAGWLRNKGLRIIGGGVRLQLDWPDLASFPDY-GLVRKRDDFDEQLARQAQKAG 123
Query: 158 ASVINGLFMKMDLPRNFEQPYVLYYT-EYDGTKGGVGEKR---TLEVDAVIGADGANSRV 213
A L+ + N P V T G +GE + T V+ ADG ++R+
Sbjct: 124 AR----LYERC----NVGAPIVDDRTGRITGVHAKLGEDKREVTFHAPLVVAADGNSTRL 175
Query: 214 AKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDFYGWVFPKC 266
+ ++ D +A + P Y E+ E++ D + P YGW+F
Sbjct: 176 SLAMGLHRREDRPMGVAVRTYFTSPRHDDDYLESWLELWDRRGPQDRLLPG-YGWIFGMG 234
Query: 267 DHVA-VGTGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIRVEAHPIPEH 313
D + VG G + K+ +A D + G IR A P+ +
Sbjct: 235 DGTSNVGLGVLNTSDSFKELDWREVLKAWCASMPEDWGYTPDNMTG--PIRGAALPMAFN 292
Query: 314 PRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRK 373
+P G + LVGDA G V +GEGI +A +SG++ A+ I++ T E L++
Sbjct: 293 RQPHYTRG-LLLVGDAGGLVNPFNGEGIAYAMESGQIAADVIVQAHARATPAQREIALQR 351
Query: 374 YLEKWDKTY 382
Y TY
Sbjct: 352 YPRVLKDTY 360
>gi|345848399|ref|ZP_08801421.1| electron transfer oxidoreductase [Streptomyces zinciresistens K42]
gi|345640135|gb|EGX61620.1| electron transfer oxidoreductase [Streptomyces zinciresistens K42]
Length = 428
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 156/369 (42%), Gaps = 44/369 (11%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVGEFDL 103
L+ V V+G GPAG A LAK G++ L+E+ + K CG G P +
Sbjct: 5 LSENTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTEFPREKVCGDGLTPRATKQLVAM 64
Query: 104 PLDIIDR----KVTKMKMISPS-NVAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNG 157
+DI + + +++I + +D +Y G+VR R+ D L +A+K G
Sbjct: 65 GIDISEEAGWLRNKGLRIIGGGVRLQLDWPDLASFPDY-GLVRKRDDFDEQLARQAQKAG 123
Query: 158 ASVINGLFMKMDLPRNFEQPYVLYYT-EYDGTKGGVGEKR---TLEVDAVIGADGANSRV 213
A L+ + N P V T G +GE++ T V+ ADG ++R+
Sbjct: 124 AR----LYERC----NVGAPVVDERTGRITGVHAKLGEEKRPVTFHAPLVVAADGNSTRL 175
Query: 214 AKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDFYGWVFPKC 266
+ ++ D +A + P Y E+ E++ G+D YGW+F
Sbjct: 176 SLAMGLHRREDRPMGVAVRTYFTSPRHDDDYLESWLELWDRRGPGEDRLLPGYGWIFGMG 235
Query: 267 DHVA-VGTGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIRVEAHPIPEH 313
D + VG G + K+ +A + + G IR A P+ +
Sbjct: 236 DGTSNVGLGVLNTSDSFKELDWREVLKAWCASMPEDWGYTPENMTG--PIRGAALPMAFN 293
Query: 314 PRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRK 373
+P G + LVGDA G V +GEGI +A +SG++ A+ I++ T E L++
Sbjct: 294 RQPHYTKG-LLLVGDAGGLVNPFNGEGIAYAMESGQIAADVIVQAHARSTPAGRELALQR 352
Query: 374 YLEKWDKTY 382
Y TY
Sbjct: 353 YPRVLKDTY 361
>gi|432750155|ref|ZP_19984762.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE29]
gi|431297072|gb|ELF86730.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE29]
Length = 429
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 45/310 (14%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP----LDIID 109
V+G G AG AA +A+ G++ +IER CK G E +P ++
Sbjct: 10 VVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVE 69
Query: 110 RKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
RKVT+ K + S V +D Q P V R LD +L E+AE+ GA I G+
Sbjct: 70 RKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGV 129
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN---AGD 221
++D V + G + G LE + VI ADG NS + +S+ A D
Sbjct: 130 --RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGRSLGMVPASD 177
Query: 222 -YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTG 274
+ YA+ +E + + E+ + E A ++ G S G F + ++ G
Sbjct: 178 PHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLYTNKDSISLG 236
Query: 275 TVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR---PRRLSGR 322
V GDI Q + +D I GGK++ AH +PE P+ ++
Sbjct: 237 LVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQMVNDG 296
Query: 323 VALVGDAAGY 332
V +VGDAAG+
Sbjct: 297 VMIVGDAAGF 306
>gi|260855522|ref|YP_003229413.1| hypothetical protein ECO26_2428 [Escherichia coli O26:H11 str.
11368]
gi|415791736|ref|ZP_11495508.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli EPECa14]
gi|417298855|ref|ZP_12086093.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 900105 (10e)]
gi|419209558|ref|ZP_13752648.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC8C]
gi|419215589|ref|ZP_13758598.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC8D]
gi|419254905|ref|ZP_13797428.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC10A]
gi|419261111|ref|ZP_13803539.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC10B]
gi|419266994|ref|ZP_13809355.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC10C]
gi|419272618|ref|ZP_13814920.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC10D]
gi|419876525|ref|ZP_14398250.1| oxidoreductase [Escherichia coli O111:H11 str. CVM9534]
gi|419885943|ref|ZP_14406602.1| oxidoreductase [Escherichia coli O111:H11 str. CVM9545]
gi|419903776|ref|ZP_14422791.1| oxidoreductase [Escherichia coli O26:H11 str. CVM9942]
gi|419908252|ref|ZP_14426997.1| hypothetical protein ECO10026_17469 [Escherichia coli O26:H11 str.
CVM10026]
gi|420102941|ref|ZP_14613866.1| oxidoreductase [Escherichia coli O111:H11 str. CVM9455]
gi|420109145|ref|ZP_14619322.1| oxidoreductase [Escherichia coli O111:H11 str. CVM9553]
gi|420129910|ref|ZP_14638425.1| oxidoreductase [Escherichia coli O26:H11 str. CVM10224]
gi|420136222|ref|ZP_14644283.1| oxidoreductase [Escherichia coli O26:H11 str. CVM9952]
gi|424752164|ref|ZP_18180170.1| oxidoreductase [Escherichia coli O26:H11 str. CFSAN001629]
gi|424756843|ref|ZP_18184633.1| oxidoreductase [Escherichia coli O111:H11 str. CFSAN001630]
gi|425379438|ref|ZP_18763552.1| electron-transferring-flavoprotein dehydrogenase [Escherichia coli
EC1865]
gi|257754171|dbj|BAI25673.1| predicted oxidoreductase [Escherichia coli O26:H11 str. 11368]
gi|323153065|gb|EFZ39334.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli EPECa14]
gi|378055423|gb|EHW17685.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC8C]
gi|378064047|gb|EHW26209.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC8D]
gi|378101947|gb|EHW63631.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC10A]
gi|378108442|gb|EHW70055.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC10B]
gi|378112866|gb|EHW74439.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC10C]
gi|378117994|gb|EHW79503.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC10D]
gi|386257894|gb|EIJ13377.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 900105 (10e)]
gi|388343857|gb|EIL09757.1| oxidoreductase [Escherichia coli O111:H11 str. CVM9534]
gi|388347518|gb|EIL13186.1| oxidoreductase [Escherichia coli O111:H11 str. CVM9545]
gi|388369269|gb|EIL32883.1| oxidoreductase [Escherichia coli O26:H11 str. CVM9942]
gi|388375557|gb|EIL38564.1| hypothetical protein ECO10026_17469 [Escherichia coli O26:H11 str.
CVM10026]
gi|394381125|gb|EJE58822.1| oxidoreductase [Escherichia coli O26:H11 str. CVM10224]
gi|394407728|gb|EJE82507.1| oxidoreductase [Escherichia coli O111:H11 str. CVM9553]
gi|394409359|gb|EJE83898.1| oxidoreductase [Escherichia coli O111:H11 str. CVM9455]
gi|394418741|gb|EJE92399.1| oxidoreductase [Escherichia coli O26:H11 str. CVM9952]
gi|408298558|gb|EKJ16492.1| electron-transferring-flavoprotein dehydrogenase [Escherichia coli
EC1865]
gi|421938453|gb|EKT96027.1| oxidoreductase [Escherichia coli O26:H11 str. CFSAN001629]
gi|421949476|gb|EKU06423.1| oxidoreductase [Escherichia coli O111:H11 str. CFSAN001630]
Length = 429
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 45/310 (14%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP----LDIID 109
V+G G AG AA +A+ G++ +IER CK G E +P ++
Sbjct: 10 VVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVE 69
Query: 110 RKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
RKVT+ K + S V +D Q P V R LD +L E+AE+ GA I G+
Sbjct: 70 RKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGV 129
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN---AGD 221
++D V + G + G LE + VI ADG NS + +S+ A D
Sbjct: 130 --RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGRSLGMVPASD 177
Query: 222 -YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTG 274
+ YA+ +E + + E+ + E A ++ G S G F + ++ G
Sbjct: 178 PHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLYTNKDSISLG 236
Query: 275 TVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR---PRRLSGR 322
V GDI Q + +D I GGK++ AH +PE P+ ++
Sbjct: 237 LVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQMVNDG 296
Query: 323 VALVGDAAGY 332
V +VGDAAG+
Sbjct: 297 VMIVGDAAGF 306
>gi|331683206|ref|ZP_08383807.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli H299]
gi|432616673|ref|ZP_19852794.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE75]
gi|331079421|gb|EGI50618.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli H299]
gi|431154913|gb|ELE55674.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE75]
Length = 429
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 136/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G + +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLDAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 S---INAGD-YDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S ++A D + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVSASDPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
+ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 229 NKDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVMIVGDAAGF 306
>gi|450189093|ref|ZP_21890414.1| oxidoreductase [Escherichia coli SEPT362]
gi|449322127|gb|EMD12128.1| oxidoreductase [Escherichia coli SEPT362]
Length = 429
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 136/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G + +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLDAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 S---INAGD-YDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S ++A D + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVSASDPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
+ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 229 NKDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVMIVGDAAGF 306
>gi|402311299|ref|ZP_10830247.1| FAD dependent oxidoreductase [Eubacterium sp. AS15]
gi|400365445|gb|EJP18497.1| FAD dependent oxidoreductase [Eubacterium sp. AS15]
Length = 431
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 148/353 (41%), Gaps = 50/353 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC--KPCGGAIPLCMVGEFDL 103
++ ++GGG AG +AA LA G+E L+ER D C K G E +
Sbjct: 1 MSEEKFDAIIVGGGLAGCSAAIVLANAGLEVLLVERG-DFCGAKNMTGGRLYGHSLEKII 59
Query: 104 PLDI----IDRKVTKMKM-ISPSNVAVDIGQTLKPHEYIG-----MVRREVLDAYLRERA 153
P I+RK+T+ K+ + + + D+G K V R D +L +A
Sbjct: 60 PNFAQEAPIERKITREKISLMGEDSSFDVGFGSKKLSSNNENASYTVLRSTFDRWLASKA 119
Query: 154 EKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEK-RTLEVDAVIGADGANSR 212
E+ GA +I G+ + + DG G+ L D VI ADG NS
Sbjct: 120 EEAGAEIIPGILVDELIVE-------------DGKVIGISATGEELYADVVILADGVNSL 166
Query: 213 VAKSINAGD----YDYAIAFQERVKIPDEKMVYY------ENLAEMYVGDDVSPDF-YGW 261
+A+ I + A+ +E +++ ++ + E +A + GD F G
Sbjct: 167 LAQGIGMKKELEPHQVAVGAKEVIRLGEDVINQRFAVNNGEGVAWLSCGDPTVGGFGGGL 226
Query: 262 VFPKCDHVAVG-TGTVTHKG--DIKKFQLATRNRAKDKIL----GGKIIRVEAHPIPE-- 312
++ D V+VG T++ G D+ QL R + I GG I H +PE
Sbjct: 227 IYTNKDSVSVGVVATLSDIGHSDLSINQLLDRFKEHPSIAPYLEGGTSIEYSGHLVPEEG 286
Query: 313 -HPRPRRLSGRVALVGDAAGYVTKC--SGEGIYFAAKSGRMCAEAIIEGSENG 362
H P V + GDAAG+ + G+ FA +SGR+ AE +I E G
Sbjct: 287 LHMVPELYRDGVLVTGDAAGFCINLGFTVRGMDFAIESGRLAAETVIRAREIG 339
>gi|432381373|ref|ZP_19624318.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE15]
gi|432611442|ref|ZP_19847605.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE72]
gi|432646206|ref|ZP_19881996.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE86]
gi|432655784|ref|ZP_19891490.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE93]
gi|432937888|ref|ZP_20136265.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE183]
gi|432985392|ref|ZP_20174116.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE215]
gi|433101163|ref|ZP_20287260.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE145]
gi|433188438|ref|ZP_20372541.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE88]
gi|430908376|gb|ELC29769.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE15]
gi|431148866|gb|ELE50139.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE72]
gi|431180243|gb|ELE80130.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE86]
gi|431191842|gb|ELE91216.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE93]
gi|431463972|gb|ELH44094.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE183]
gi|431500829|gb|ELH79815.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE215]
gi|431620293|gb|ELI89170.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE145]
gi|431706481|gb|ELJ71051.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE88]
Length = 429
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 135/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
I+RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPIERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 S---INAGD-YDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S ++A D + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVSASDPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
+ +V G V DI Q + +D I GGK++ AH +PE
Sbjct: 229 NKDSVSLGLVCGLSDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQMVNDGVMIVGDAAGF 306
>gi|410458382|ref|ZP_11312142.1| geranylgeranyl reductase [Bacillus azotoformans LMG 9581]
gi|409931564|gb|EKN68546.1| geranylgeranyl reductase [Bacillus azotoformans LMG 9581]
Length = 431
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 158/367 (43%), Gaps = 65/367 (17%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPL-----CMVGEF--DLP 104
V ++G GPAG A A T AK G++ LIER + K G I ++ EF D P
Sbjct: 7 VIIVGAGPAGSACAYTSAKAGLKVLLIERGEYPGAKNVMGGILYRKQLEDIIPEFWKDAP 66
Query: 105 LD--IIDRKVTKMKMISPSNVAV---DIGQTLKPHEYIGMVRREVLDAYLRERAEKNGAS 159
L+ II+++ M S +V + G+ P+ ++R + D + +A + GA
Sbjct: 67 LERPIIEQRAWLMDKKSCVTSSVKNEEWGEA--PYNCFSVLRAK-FDQWFANKAVEAGAL 123
Query: 160 VINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKR---TLEVDAVIGADGANSRVAKS 216
+IN + VL +G GV R + D V+ ADG NS +AK
Sbjct: 124 LIN-------------ETVVLECIVENGKVVGVRTDRPDGDVYADVVVLADGVNSLLAKQ 170
Query: 217 INAGDY----DYAIAFQERVKIPDEKMVYYENLAEMYVGDD--VSPDFYG---------- 260
+ + A+ E + +P + + N VGD+ V+ + +G
Sbjct: 171 LGFHRELRPDEVALCAMEVINLPKDVINDRFN-----VGDNQGVAIEIFGDGTKGNLGTC 225
Query: 261 WVFPKCDHVAVGTGTVTH---KGDIKKFQLA--TRNR--AKDKILGGKIIRVEAHPIPE- 312
+++ + + +G G K IK ++L +N K I G+ AH IPE
Sbjct: 226 FIYTNKESINIGVGATLSSMVKEKIKPYELLEYVKNHPMVKPLIKDGESAEYLAHLIPEG 285
Query: 313 --HPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGD 370
+ P+ V +VGDAA +V EG A SGR+ AE IIE + G I E
Sbjct: 286 GYNSIPKLYGDGVLVVGDAAQFVNGIHREGSNMAMTSGRLAAETIIEAKQKGD--ISESA 343
Query: 371 LRKYLEK 377
L +Y EK
Sbjct: 344 LSRYREK 350
>gi|150399291|ref|YP_001323058.1| geranylgeranyl reductase [Methanococcus vannielii SB]
gi|150011994|gb|ABR54446.1| geranylgeranyl reductase [Methanococcus vannielii SB]
Length = 391
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 127/318 (39%), Gaps = 35/318 (11%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
+ ++GGGPAG E + V +++ C G I + V E P ++ KV
Sbjct: 8 IIIVGGGPAGFITGENITDKKVLVLEEHQEIGVPLQCAGLISVNGVKELGNPKGSVN-KV 66
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEK-------------NGAS 159
+ S +NV + ++ + R+V+D + +RA K N
Sbjct: 67 RGANIFSKNNVFTVGNEKVRAEVF----ERKVMDKDIAKRASKRVDVLMKSYGKIKNSNQ 122
Query: 160 VINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINA 219
K L F++ +++ +GE + +IGADG S + KS+
Sbjct: 123 KRRNYITKSSLKEKFQKLEIMH----------LGESYEVCPKIIIGADGIRSNIGKSLQM 172
Query: 220 GDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHK 279
I+ ++I ++ ++ S F+ W+ P + V GT
Sbjct: 173 NKKREIIS---GIQIEYANAKIDDDFVNVFYDKRYSERFFTWIIP-LGNDRVRVGTCDSN 228
Query: 280 GDIKKF-QLATRNRAKDKILGGKI-IRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCS 337
KK + NR ++IL I + IP + ++ V LVGD+AG V S
Sbjct: 229 NSYKKLTEFLKNNRIANEILKNATPIEFTSGAIP-IGYSKTVTDNVMLVGDSAGQVKPLS 287
Query: 338 GEGIYFAAKSGRMCAEAI 355
G G+Y+ AK G++CA I
Sbjct: 288 GGGLYYGAKCGKICANTI 305
>gi|408383171|ref|ZP_11180709.1| digeranylgeranylglycerophospholipid reductase [Methanobacterium
formicicum DSM 3637]
gi|407814089|gb|EKF84726.1| digeranylgeranylglycerophospholipid reductase [Methanobacterium
formicicum DSM 3637]
Length = 393
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 144/338 (42%), Gaps = 57/338 (16%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
+ VIG GPAG AA+ G + +I++K + P A + G L ++ R V
Sbjct: 6 ILVIGAGPAGSTAAKHAVIGGAQVIVIDKKSEIGSPKRCAEGVSKDGLKKLGIEPSPRWV 65
Query: 113 TK----MKMISPSNVAVDI-GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK 167
TK ++M+SP+ AV++ + +K E ++ R+V D ++ A + GA + +
Sbjct: 66 TKEATGVRMVSPNGTAVNLTDEKVKLPEAGYILERKVFDKFMAMDAGRAGAKI---MVKT 122
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK------SINAGD 221
+ E+ V+ E+ +GE+ ++ VI ADG SRV + ++ +
Sbjct: 123 LATGLRREEDQVVVTVEH------MGEELEIKAKIVIAADGPESRVGRWAGLKTALKPKN 176
Query: 222 YDYAIAFQ-ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHK 279
+ F+ V++ + + E + G V+P Y W+FPK D +A VG G +T
Sbjct: 177 MESCAQFEMAGVQMAEPDCI------EFHFG-SVAPGGYAWIFPKGDDIANVGLGVLTTI 229
Query: 280 GDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL---------------SGRVA 324
D +Q VE++P ++ +P L + V
Sbjct: 230 TDKTAYQHLLE-------------FVESNPATQNAQPVELNVGGDPVGGLLKKMVADNVL 276
Query: 325 LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENG 362
+ GDAA V +G GI GR+ + + +G
Sbjct: 277 VTGDAASMVNPLTGGGIISGMLGGRIAGQVAAQAVSDG 314
>gi|415773576|ref|ZP_11486171.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli 3431]
gi|315618896|gb|EFU99479.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli 3431]
Length = 429
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 137/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVLQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNEGVMIVGDAAGF 306
>gi|300924736|ref|ZP_07140681.1| FAD dependent oxidoreductase [Escherichia coli MS 182-1]
gi|301327424|ref|ZP_07220663.1| FAD dependent oxidoreductase [Escherichia coli MS 78-1]
gi|416346724|ref|ZP_11679815.1| putative electron transfer flavoprotein-quinone oxidoreductase FixC
[Escherichia coli EC4100B]
gi|422956943|ref|ZP_16969417.1| hypothetical protein ESQG_00912 [Escherichia coli H494]
gi|432831677|ref|ZP_20065251.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE135]
gi|450215066|ref|ZP_21895402.1| oxidoreductase [Escherichia coli O08]
gi|300419085|gb|EFK02396.1| FAD dependent oxidoreductase [Escherichia coli MS 182-1]
gi|300845996|gb|EFK73756.1| FAD dependent oxidoreductase [Escherichia coli MS 78-1]
gi|320197882|gb|EFW72490.1| putative electron transfer flavoprotein-quinone oxidoreductase FixC
[Escherichia coli EC4100B]
gi|371599244|gb|EHN88034.1| hypothetical protein ESQG_00912 [Escherichia coli H494]
gi|431375647|gb|ELG60970.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE135]
gi|449319284|gb|EMD09337.1| oxidoreductase [Escherichia coli O08]
Length = 429
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 45/310 (14%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP----LDIID 109
V+G G AG AA +A+ G++ +IER CK G E +P ++
Sbjct: 10 VVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVE 69
Query: 110 RKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
RKVT+ K + S V +D Q P V R LD +L E+AE+ GA I G+
Sbjct: 70 RKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGV 129
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN---AGD 221
++D V + G + G LE + VI ADG NS + +S+ A D
Sbjct: 130 --RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGRSLGMVPASD 177
Query: 222 -YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTG 274
+ YA+ +E + + E+ + E A ++ G S G F + ++ G
Sbjct: 178 PHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLYTNKDSISLG 236
Query: 275 TVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR---PRRLSGR 322
V GDI Q + +D I GGK++ AH +PE P+ ++
Sbjct: 237 LVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNDG 296
Query: 323 VALVGDAAGY 332
V +VGDAAG+
Sbjct: 297 VMIVGDAAGF 306
>gi|420118936|ref|ZP_14628245.1| oxidoreductase [Escherichia coli O26:H11 str. CVM10030]
gi|394432309|gb|EJF04411.1| oxidoreductase [Escherichia coli O26:H11 str. CVM10030]
Length = 429
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 45/310 (14%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP----LDIID 109
V+G G AG AA +A+ G++ +IER CK G E +P ++
Sbjct: 10 VVGAGVAGSVAALVIARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVE 69
Query: 110 RKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
RKVT+ K + S V +D Q P V R LD +L E+AE+ GA I G+
Sbjct: 70 RKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGV 129
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN---AGD 221
++D V + G + G LE + VI ADG NS + +S+ A D
Sbjct: 130 --RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGRSLGMVPASD 177
Query: 222 -YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTG 274
+ YA+ +E + + E+ + E A ++ G S G F + ++ G
Sbjct: 178 PHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLYTNKDSISLG 236
Query: 275 TVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR---PRRLSGR 322
V GDI Q + +D I GGK++ AH +PE P+ ++
Sbjct: 237 LVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQMVNDG 296
Query: 323 VALVGDAAGY 332
V +VGDAAG+
Sbjct: 297 VMIVGDAAGF 306
>gi|425452225|ref|ZP_18832043.1| Geranylgeranyl reductase [Microcystis aeruginosa PCC 7941]
gi|389766018|emb|CCI08197.1| Geranylgeranyl reductase [Microcystis aeruginosa PCC 7941]
Length = 378
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 132/312 (42%), Gaps = 38/312 (12%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPLD-IIDRKV 112
+IG GPAG A LAK G ++++ KL KPCGG + + FD +I+ V
Sbjct: 6 IIGAGPAGTTAGYHLAKKGRSILILDKAKLPRYKPCGGGVSPAIKQWFDFDFTPVIENTV 65
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPR 172
T+++ AV L E + MV+R+ D +L ++A GA++ D
Sbjct: 66 TQVQFTWKQGDAVTT--KLNMLEPMWMVQRDRFDDFLGQQAIAVGATI-------QDNSE 116
Query: 173 NFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERV 232
+ +V + + ++G T +I ADG ++ + + AI +
Sbjct: 117 VTQIKFVQDHWQVTTSQG------TFSGKYLIAADGVKGNTSRWLGLPAKNEAIGATLEI 170
Query: 233 -----KIPDEKMVY-YENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQ 286
IP +K + + +L Y+ W FPK + + G KG IK +
Sbjct: 171 TNAEATIPPQKAFFDFGSLKNGYI----------WAFPKSNGYTISGG--CFKGSIKSEE 218
Query: 287 LATR--NRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALV-GDAAGYVTKCSGEGIYF 343
L + N A+ K + R + + + L + AL+ G+AAG + GEGI
Sbjct: 219 LKKQLLNYARQKGWNLQDYRYSEYALALWNGNQPLHAQNALITGEAAGILDPLIGEGIRP 278
Query: 344 AAKSGRMCAEAI 355
A +G AEAI
Sbjct: 279 AILTGVKAAEAI 290
>gi|419370093|ref|ZP_13911215.1| FAD binding domain protein [Escherichia coli DEC14A]
gi|378219553|gb|EHX79821.1| FAD binding domain protein [Escherichia coli DEC14A]
Length = 429
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 45/310 (14%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP----LDIID 109
V+G G AG AA +A+ G++ +IER CK G E +P ++
Sbjct: 10 VVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVE 69
Query: 110 RKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
RKVT+ K + S V +D Q P V R LD +L E+AE+ GA I G+
Sbjct: 70 RKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGV 129
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN---AGD 221
++D V + G + G LE + VI ADG NS + +S+ A D
Sbjct: 130 --RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGRSLGMVPASD 177
Query: 222 -YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTG 274
+ YA+ +E + + E+ + E A ++ G S G F + ++ G
Sbjct: 178 PHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLYTNKDSISLG 236
Query: 275 TVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR---PRRLSGR 322
V GDI Q + +D I GGK++ AH +PE P+ ++
Sbjct: 237 LVCGLGDIAHAQKSVPKMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQMVNDG 296
Query: 323 VALVGDAAGY 332
V +VGDAAG+
Sbjct: 297 VMIVGDAAGF 306
>gi|331663179|ref|ZP_08364089.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli TA143]
gi|432489308|ref|ZP_19731189.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE213]
gi|432839323|ref|ZP_20072810.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE140]
gi|433203276|ref|ZP_20387057.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE95]
gi|331058978|gb|EGI30955.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli TA143]
gi|431021344|gb|ELD34667.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE213]
gi|431389475|gb|ELG73186.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE140]
gi|431722344|gb|ELJ86310.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE95]
Length = 429
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 136/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L ++AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMDQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S+ A D + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
++ +V G V GDI Q + +D I GGK++ AH +PE
Sbjct: 229 NNDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVIIVGDAAGF 306
>gi|390442253|ref|ZP_10230265.1| Geranylgeranyl reductase [Microcystis sp. T1-4]
gi|389834432|emb|CCI34391.1| Geranylgeranyl reductase [Microcystis sp. T1-4]
Length = 378
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 130/312 (41%), Gaps = 38/312 (12%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPLD-IIDRKV 112
+IG GPAG A LAK G ++++ KL KPCGG + + FD +I+ V
Sbjct: 6 IIGAGPAGTTAGYHLAKRGRSVLILDKAKLPRYKPCGGGVSPAIKQWFDFDFTPVIENTV 65
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPR 172
T+++ V L E + MV+R+ D +L ++A GA++ +
Sbjct: 66 TQVQFTWKQGDTVTT--KLNMLEPMWMVQRDRFDDFLGQQAIAVGATIQD---------- 113
Query: 173 NFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIA----- 227
N E + + ++ G T +I ADG ++ + + AI
Sbjct: 114 NSEVTQIKFLQDHWQVTTSQG---TFSGKYLIAADGVKGNTSRWLGLPAKNQAIGATLEI 170
Query: 228 FQERVKIPDEKMVY-YENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQ 286
V IP +K + + +L Y+ W FPK + + G KG IK +
Sbjct: 171 TNAEVTIPPQKAFFDFGSLKNGYI----------WAFPKSNGYTISGG--CFKGSIKSEE 218
Query: 287 LATR--NRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALV-GDAAGYVTKCSGEGIYF 343
L + N A+ K + R + + + L + AL+ G+AAG + GEGI
Sbjct: 219 LKKQLLNYARQKGWNLEDYRYSEYALALWNGNQPLHAQNALITGEAAGILDPLIGEGIRP 278
Query: 344 AAKSGRMCAEAI 355
A +G AEAI
Sbjct: 279 AILTGVKAAEAI 290
>gi|419283973|ref|ZP_13826164.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC10F]
gi|378135515|gb|EHW96826.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC10F]
Length = 429
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 45/310 (14%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP----LDIID 109
V+G G AG AA +A+ G++ +IER CK G E +P ++
Sbjct: 10 VVGAGVAGSVAALIMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVE 69
Query: 110 RKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
RKVT+ K + S V +D Q P V R LD +L E+AE+ GA I G+
Sbjct: 70 RKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGV 129
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN---AGD 221
++D V + G + G LE + VI ADG NS + +S+ A D
Sbjct: 130 --RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGRSLGMVPASD 177
Query: 222 -YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTG 274
+ YA+ +E + + E+ + E A ++ G S G F + ++ G
Sbjct: 178 PHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLYTNKDSISLG 236
Query: 275 TVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR---PRRLSGR 322
V GDI Q + +D I GGK++ AH +PE P+ ++
Sbjct: 237 LVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQMVNDG 296
Query: 323 VALVGDAAGY 332
V +VGDAAG+
Sbjct: 297 VMIVGDAAGF 306
>gi|52352391|gb|AAU43680.1| conserved hypothetical protein [uncultured archaeon GZfos26D8]
Length = 464
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 144/345 (41%), Gaps = 62/345 (17%)
Query: 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIP--------LCMV 98
R + V+GGGPAG AA+ AK G T +IE +P C G I L +
Sbjct: 40 REYDIVVVGGGPAGCMAAKYAAKAGASTLIIEENSAIGEPVQCAGLISKRAIEESELKNI 99
Query: 99 GEF---DLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEK 155
G F +L I+ + ++++ SPS P + +RR++ D L + A
Sbjct: 100 GSFVNCELKGAIVHSQSHELRIESPS-----------PDKSAFAIRRDIFDKELAKAAMD 148
Query: 156 NGASVI-NGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVG-EKRTLEVDAVIGADGANSRV 213
GA +I N + R + + T GV E+ ++ + VIGADG S +
Sbjct: 149 EGADLILNSKVKHVKRGRERDGAKLTILAAATTTNVGVNLEENEIKANVVIGADGWRSGI 208
Query: 214 AKSINAGD-YDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-V 271
A+ GD F V+I + + +E +A+++VG ++P F+ WV P + A +
Sbjct: 209 ARMAGVGDGLTVTKNFLNCVQIEGQYEI-HEPVADIFVGKTIAPGFFAWVIPIGETTARI 267
Query: 272 GTGT------------------VTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEH 313
G H KK++ A+ + G I PIP
Sbjct: 268 GLCIDKRFSPHPNPLPFLKRILSEHPVIAKKYKFG----AQSQFTAGAI------PIPTE 317
Query: 314 PRPRRLSGR----VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEA 354
R + + + LVGDAA V +G G+Y+ K G++ EA
Sbjct: 318 -RQKTVKTEEGTGILLVGDAAAQVKPITGGGVYYGMKCGKIAGEA 361
>gi|256545796|ref|ZP_05473152.1| FixC protein [Anaerococcus vaginalis ATCC 51170]
gi|256398492|gb|EEU12113.1| FixC protein [Anaerococcus vaginalis ATCC 51170]
Length = 430
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 158/354 (44%), Gaps = 57/354 (16%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC--KPCGGAIPLCMVGEFDL 103
++ V ++GGG AG +AA LA+N +E L+ER D C K G E +
Sbjct: 1 MSEDKFDVIIVGGGVAGLSAAIVLAENDLEVMLVERG-DYCGAKNVTGGRLYGHSLEKII 59
Query: 104 PLDI----IDRKVTKMKM-ISPSNVAVDIGQTLKP------HEYIGMVRREVLDAYLRER 152
P I+RKV K K+ + + DIG + K Y+ V D YL ++
Sbjct: 60 PNFAEEAPIERKVVKEKISMMSEKSSFDIGFSSKALGKDKDSSYV--VLHSKFDQYLADK 117
Query: 153 AEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGV---GEKRTLEVDAVIGADGA 209
AE+ G S+I+G+ ++ L DG G+ GE+ + D VI ADG
Sbjct: 118 AEEAGVSIISGVLVEKLLVE-------------DGKVVGIDATGEE--VFADVVIIADGV 162
Query: 210 NSRVAKSINAGD----YDYAIAFQERVKIPDE------KMVYYENLAEMYVGD-DVSPDF 258
NS +++ + + A+ +E +++ +E + E ++ + GD +
Sbjct: 163 NSLLSQQLGIKKELEPHQVAVGAKEVIELSEEIINERFNLESDEGMSWLSCGDPTIGGFG 222
Query: 259 YGWVFPKCDHVAVG-TGTVTHKG--DIKKFQLATRNRAKDK----ILGGKIIRVEAHPIP 311
G+++ D +++G T++ G + K L R + D I GGK I AH +P
Sbjct: 223 GGFIYTNKDSISIGVVATLSDIGYANTKINDLLERFKEHDNVAPFIKGGKTIEYSAHLVP 282
Query: 312 E---HPRPRRLSGRVALVGDAAGYVTKC--SGEGIYFAAKSGRMCAEAIIEGSE 360
E H P +VGDAAG+ + G+ FA +SGR+ A +II E
Sbjct: 283 EEGIHMIPELYGDGFLVVGDAAGFCVNLGYTVRGMDFAIESGRLAALSIIASKE 336
>gi|432809346|ref|ZP_20043239.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE101]
gi|431362114|gb|ELG48692.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE101]
Length = 429
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 45/310 (14%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP----LDIID 109
V+G G AG AA +A+ G++ +IER CK G E +P ++
Sbjct: 10 VVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVE 69
Query: 110 RKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
RKVT+ K + S V +D Q P V R LD +L E+AE+ GA I G+
Sbjct: 70 RKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGV 129
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN---AGD 221
++D V + G + G LE + VI ADG NS + +S+ A D
Sbjct: 130 --RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGRSLGMVPASD 177
Query: 222 -YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTG 274
+ YA+ +E + + E+ + E A ++ G S G F + ++ G
Sbjct: 178 PHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLYTNKDSISLG 236
Query: 275 TVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR---PRRLSGR 322
V GDI Q + +D I GGK++ AH +PE P+ ++
Sbjct: 237 LVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNDG 296
Query: 323 VALVGDAAGY 332
V +VGDAAG+
Sbjct: 297 VMIVGDAAGF 306
>gi|170684211|ref|YP_001743554.1| hypothetical protein EcSMS35_1496 [Escherichia coli SMS-3-5]
gi|170521929|gb|ACB20107.1| protein FixC homolog [Escherichia coli SMS-3-5]
Length = 429
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 137/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMAQAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTDESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQIKDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIHPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNDGVMIVGDAAGF 306
>gi|84489857|ref|YP_448089.1| dehydrogenase [Methanosphaera stadtmanae DSM 3091]
gi|121725493|sp|Q2NFF7.1|GGR2_METST RecName: Full=Digeranylgeranylglycerophospholipid reductase 2;
Short=DGGGPL reductase 2; AltName:
Full=2,3-di-O-geranylgeranylglyceryl phosphate reductase
2; AltName: Full=Geranylgeranyl reductase 2; Short=GGR 2
gi|84373176|gb|ABC57446.1| predicted dehydrogenase [Methanosphaera stadtmanae DSM 3091]
Length = 393
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 163/356 (45%), Gaps = 45/356 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLD--II 108
+ V+G GP+G AA+ A +G + LI+RK + P C + + + + D I
Sbjct: 6 ILVVGAGPSGSLAAKEAALHGADVILIDRKSEIGSPKRCAEGVSKDGLAQLGIKPDPRWI 65
Query: 109 DRKVTKMKMISPSNVAVDI-GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVI---NGL 164
R + ++++SP+N +V + T+K E ++ R+V D ++ A + GA ++ N
Sbjct: 66 ARDLYGVRLVSPNNTSVWMDNNTIKIPEAGYILERKVFDKHMAMDAARAGAKIMIKTNAT 125
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAG-DYD 223
+K ++ T + +G+ + VI ADG SR+ + AG + +
Sbjct: 126 SLKR------VDDGIIVSTNH------MGKDIDIHAKIVIAADGPESRIGRW--AGLECN 171
Query: 224 YAIAFQERVKIPDEKMVYYENLAE--MYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKG 280
+ E + V EN + ++ G V+P Y W+FPK D +A VG G + +K
Sbjct: 172 TEFKYMESCIQFEMAGVNMENNRDIALFFG-SVAPGGYVWIFPKGDDIANVGIGVLKNKT 230
Query: 281 DIKKFQ-----LATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTK 335
+ ++ + T KD I V P+ + R+ + +VGDAAG+V
Sbjct: 231 NKTAYEHLMEFIKTCPETKDA--QPVEINVGGDPVGGIIKD-RIGDNILVVGDAAGFVNS 287
Query: 336 CSGEGIYFAAKSGR----MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYK 387
+G GI A +SG + A+AI +G + + +L++Y+ D+ YK
Sbjct: 288 LTGGGINSALESGVYAGIVAAQAIKDGDYS------KNNLKEYVSLTDEHIGKHYK 337
>gi|425438360|ref|ZP_18818765.1| Geranylgeranyl reductase [Microcystis aeruginosa PCC 9432]
gi|389676532|emb|CCH94503.1| Geranylgeranyl reductase [Microcystis aeruginosa PCC 9432]
Length = 379
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 132/312 (42%), Gaps = 38/312 (12%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPLD-IIDRKV 112
+IG GPAG A LAK G ++++ KL KPCGG + + FD +I+ V
Sbjct: 6 IIGAGPAGTTAGYHLAKKGRSILILDKAKLPRYKPCGGGVSPAIKQWFDFDFTPVIENTV 65
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPR 172
T+++ AV L E + MV+R+ D +L ++A GA++ D
Sbjct: 66 TQVQFTWKQGDAVTT--KLNMLEPMWMVQRDRFDDFLGQQAIAVGATI-------QDNSE 116
Query: 173 NFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERV 232
+ +V + + ++G T +I ADG ++ + + AI +
Sbjct: 117 VTQIKFVQDHWQVTTSQG------TFSGKYLIAADGVRGNTSRWLGLPAKNEAIGATLEI 170
Query: 233 -----KIPDEKMVY-YENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQ 286
IP +K + + +L Y+ W FPK + + G KG IK +
Sbjct: 171 TNAEATIPPQKAFFDFGSLKNGYI----------WAFPKSNGYTISGG--CFKGSIKSEE 218
Query: 287 LATR--NRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALV-GDAAGYVTKCSGEGIYF 343
L + N A+ K + R + + + L + AL+ G+AAG + GEGI
Sbjct: 219 LKKQLLNYARQKGWNLQDYRYSEYALALWNGNQPLHAQNALITGEAAGILDPLIGEGIRP 278
Query: 344 AAKSGRMCAEAI 355
A +G AEAI
Sbjct: 279 AILTGVKAAEAI 290
>gi|330507261|ref|YP_004383689.1| geranylgeranyl reductase [Methanosaeta concilii GP6]
gi|328928069|gb|AEB67871.1| geranylgeranyl reductase [Methanosaeta concilii GP6]
Length = 388
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 150/355 (42%), Gaps = 54/355 (15%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIP--------LCMVG 99
++++AV+G GPAG AA A+ ++ LI+RK + P CGG +P L G
Sbjct: 4 DIQLAVVGAGPAGSTAALVAARE-LDVVLIDRKSEIGSPVQCGGFLPEAWELEALLPRAG 62
Query: 100 EFD----LPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEK 155
D +P I + ++ SPS + + + ++ R D +L +A +
Sbjct: 63 LPDALREIPEHCILHRTQLQRIYSPSGKSKEFAVAGR------VIDRRAFDRHLASQAAR 116
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA ++ + V E G G L +IGADG +S V++
Sbjct: 117 AGARILPATRATL----------VEGGLELSGHYAG-----RLRPQMIIGADGPSSIVSR 161
Query: 216 SINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFP-KCDHVAVGTG 274
+ G+ + + ++ D + + AEM+ +P Y W+ P D VG G
Sbjct: 162 YM--GNPAQEVGICQEYEMTDVDI--DSDAAEMFFSARYAPGGYAWIIPLGPDRANVGVG 217
Query: 275 ------TVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVG 327
+ D+ + + +A K+ G+++ V +P + G + L G
Sbjct: 218 VRASYLSGQRLSDVLQRFVQDHPQASKKLASGEVLAVMRGLVPAGGTVGSIQKGNMILAG 277
Query: 328 DAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTY 382
DAAG+V SG GI A +GR+ ++ I+ ++GT L++YL + +
Sbjct: 278 DAAGHVLATSGGGIPLAVVAGRIAGQSAIDHLQSGT------PLQEYLSSIGQEF 326
>gi|432947575|ref|ZP_20142731.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE196]
gi|433043298|ref|ZP_20230799.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE117]
gi|431457553|gb|ELH37890.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE196]
gi|431556629|gb|ELI30404.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE117]
Length = 429
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 137/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKITGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNEGVMIVGDAAGF 306
>gi|417707626|ref|ZP_12356671.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Shigella flexneri VA-6]
gi|420331161|ref|ZP_14832836.1| FAD binding domain protein [Shigella flexneri K-1770]
gi|333003790|gb|EGK23326.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Shigella flexneri VA-6]
gi|391254652|gb|EIQ13813.1| FAD binding domain protein [Shigella flexneri K-1770]
Length = 429
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 137/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFIY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNEGVMIVGDAAGF 306
>gi|306815047|ref|ZP_07449203.1| hypothetical protein ECNC101_23433 [Escherichia coli NC101]
gi|305851695|gb|EFM52148.1| hypothetical protein ECNC101_23433 [Escherichia coli NC101]
Length = 429
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 135/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
I+RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPIERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 S---INAGD-YDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S ++A D + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVSASDPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
+ +V G V DI Q + +D I GGK++ AH +PE
Sbjct: 229 NKDSVSLGLVCGLSDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVMIVGDAAGF 306
>gi|91210913|ref|YP_540899.1| hypothetical protein UTI89_C1892 [Escherichia coli UTI89]
gi|117623877|ref|YP_852790.1| hypothetical protein APECO1_775 [Escherichia coli APEC O1]
gi|218558569|ref|YP_002391482.1| hypothetical protein ECS88_1750 [Escherichia coli S88]
gi|237705646|ref|ZP_04536127.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|386599498|ref|YP_006101004.1| protein fixC [Escherichia coli IHE3034]
gi|386604330|ref|YP_006110630.1| hypothetical protein UM146_08655 [Escherichia coli UM146]
gi|417084635|ref|ZP_11952274.1| hypothetical protein i01_02238 [Escherichia coli cloneA_i1]
gi|419946521|ref|ZP_14462918.1| hypothetical protein ECHM605_20663 [Escherichia coli HM605]
gi|422359792|ref|ZP_16440429.1| FAD dependent oxidoreductase [Escherichia coli MS 110-3]
gi|422748930|ref|ZP_16802842.1| FAD dependent oxidoreductase [Escherichia coli H252]
gi|422755035|ref|ZP_16808860.1| FAD dependent oxidoreductase [Escherichia coli H263]
gi|422838375|ref|ZP_16886348.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli H397]
gi|432358039|ref|ZP_19601268.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE4]
gi|432362664|ref|ZP_19605835.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE5]
gi|432387127|ref|ZP_19630018.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE16]
gi|432513940|ref|ZP_19751166.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE224]
gi|432573736|ref|ZP_19810218.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE55]
gi|432587963|ref|ZP_19824319.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE58]
gi|432597686|ref|ZP_19833962.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE62]
gi|432699060|ref|ZP_19934218.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE169]
gi|432745684|ref|ZP_19980353.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE43]
gi|432754447|ref|ZP_19988998.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE22]
gi|432778577|ref|ZP_20012820.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE59]
gi|432787523|ref|ZP_20021655.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE65]
gi|432820959|ref|ZP_20054651.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE118]
gi|432827103|ref|ZP_20060755.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE123]
gi|432904872|ref|ZP_20113778.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE194]
gi|432971863|ref|ZP_20160731.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE207]
gi|433007654|ref|ZP_20196072.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE229]
gi|433038628|ref|ZP_20226232.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE113]
gi|433082572|ref|ZP_20269037.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE133]
gi|433144237|ref|ZP_20329389.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE168]
gi|433163484|ref|ZP_20348229.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE179]
gi|433168605|ref|ZP_20353238.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE180]
gi|91072487|gb|ABE07368.1| probable electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli UTI89]
gi|115513001|gb|ABJ01076.1| predicted oxidoreductase with FAD/NAD(P)-binding domain
[Escherichia coli APEC O1]
gi|218365338|emb|CAR03059.1| putative oxidoreductase subunit with FAD/NAD(P)-binding domain
[Escherichia coli S88]
gi|226900403|gb|EEH86662.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|294494089|gb|ADE92845.1| protein fixC [Escherichia coli IHE3034]
gi|307626814|gb|ADN71118.1| hypothetical protein UM146_08655 [Escherichia coli UM146]
gi|315286374|gb|EFU45810.1| FAD dependent oxidoreductase [Escherichia coli MS 110-3]
gi|323952206|gb|EGB48079.1| FAD dependent oxidoreductase [Escherichia coli H252]
gi|323956600|gb|EGB52338.1| FAD dependent oxidoreductase [Escherichia coli H263]
gi|355351810|gb|EHG00997.1| hypothetical protein i01_02238 [Escherichia coli cloneA_i1]
gi|371614299|gb|EHO02784.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli H397]
gi|388412576|gb|EIL72633.1| hypothetical protein ECHM605_20663 [Escherichia coli HM605]
gi|430878023|gb|ELC01455.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE4]
gi|430887203|gb|ELC10030.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE5]
gi|430907109|gb|ELC28608.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE16]
gi|431042538|gb|ELD53026.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE224]
gi|431108447|gb|ELE12419.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE55]
gi|431120296|gb|ELE23294.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE58]
gi|431130553|gb|ELE32636.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE62]
gi|431244309|gb|ELF38617.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE169]
gi|431291821|gb|ELF82317.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE43]
gi|431302648|gb|ELF91827.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE22]
gi|431326730|gb|ELG14075.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE59]
gi|431337240|gb|ELG24328.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE65]
gi|431367806|gb|ELG54274.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE118]
gi|431372352|gb|ELG58014.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE123]
gi|431433172|gb|ELH14844.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE194]
gi|431482564|gb|ELH62266.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE207]
gi|431524187|gb|ELI01134.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE229]
gi|431552088|gb|ELI26050.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE113]
gi|431602899|gb|ELI72326.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE133]
gi|431662783|gb|ELJ29551.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE168]
gi|431688571|gb|ELJ54089.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE179]
gi|431688929|gb|ELJ54446.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE180]
Length = 429
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 135/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
I+RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPIERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 S---INAGD-YDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S ++A D + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVSASDPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
+ +V G V DI Q + +D I GGK++ AH +PE
Sbjct: 229 NKDSVSLGLVCGLSDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVMIVGDAAGF 306
>gi|78357232|ref|YP_388681.1| geranylgeranyl reductase [Desulfovibrio alaskensis G20]
gi|78219637|gb|ABB38986.1| geranylgeranyl reductase [Desulfovibrio alaskensis G20]
Length = 383
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 150/360 (41%), Gaps = 36/360 (10%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIP----LCMVGEFDLPLDIID 109
V+GGGP G +AA TLA+NG +I+ K K CGG + + F + +
Sbjct: 13 VVGGGPCGASAAFTLARNGYTVMVIDAGKFPRFKLCGGLLTGKSTAFLRDCFGMDASCLA 72
Query: 110 RK-----VTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
R I + G P + VRR+ D+ L + GA V G
Sbjct: 73 RAGALEGCENSYHIYAGGRRIVAGSNGSPFYF---VRRDRFDSRLLKSVAAAGAVVREGT 129
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAG-DYD 223
+ R + +DG+ ++ + +I ADG +S V K++ G +
Sbjct: 130 KVVHADCRTGK------VHCHDGS--------SVCAEFIIAADGVHSTVRKAVCGGLRHS 175
Query: 224 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIK 283
A V +P M L +++G + YGW+FP ++ G G + +G+
Sbjct: 176 VRQAVAVEVAVPRRHMPQGVQLPSVHLG--LLQRGYGWLFPNRRNIVAGVGGLLCRGEHP 233
Query: 284 KFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRR-LSGRVALVGDAAGYVTKCSGEGIY 342
L T + G I + + +P RR SGRV L GDAAG+ GEGIY
Sbjct: 234 ARVLRTL-LCGCGVQAGHIPQPRGYTLPFGGHLRRPFSGRVLLAGDAAGFADAVFGEGIY 292
Query: 343 FAAKSGRMCAEAIIEG---SENGTRMIDE-GDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398
+A SG + A+A+++ G+ + +E G Y++ + + T VL + YR
Sbjct: 293 YAMLSGSLAAQAVMQALPVRAAGSVLHEEHGAGTFYMQLLQRNLFRTLGQAAVLHRFLYR 352
>gi|422973798|ref|ZP_16975966.1| hypothetical protein ESRG_02600 [Escherichia coli TA124]
gi|371596219|gb|EHN85058.1| hypothetical protein ESRG_02600 [Escherichia coli TA124]
Length = 429
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 137/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMAQAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNEGVMIVGDAAGF 306
>gi|194438516|ref|ZP_03070605.1| protein FixC homolog [Escherichia coli 101-1]
gi|251785150|ref|YP_002999454.1| putative flavoprotein [Escherichia coli BL21(DE3)]
gi|253773346|ref|YP_003036177.1| hypothetical protein ECBD_1947 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161759|ref|YP_003044867.1| hypothetical protein ECB_01668 [Escherichia coli B str. REL606]
gi|254288547|ref|YP_003054295.1| oxidoreductase with FAD/NAD(P)-binding domain [Escherichia coli
BL21(DE3)]
gi|293415014|ref|ZP_06657657.1| oxidoreductase FixC [Escherichia coli B185]
gi|300930830|ref|ZP_07146200.1| FAD dependent oxidoreductase [Escherichia coli MS 187-1]
gi|422786284|ref|ZP_16839023.1| FAD dependent oxidoreductase [Escherichia coli H489]
gi|422789614|ref|ZP_16842319.1| FAD dependent oxidoreductase [Escherichia coli TA007]
gi|442598263|ref|ZP_21016035.1| Probable electron transfer flavoprotein-quinone oxidoreductase FixC
[Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|194422526|gb|EDX38524.1| protein FixC homolog [Escherichia coli 101-1]
gi|242377423|emb|CAQ32174.1| putative flavoprotein [Escherichia coli BL21(DE3)]
gi|253324390|gb|ACT28992.1| Electron-transferring-flavoprotein dehydrogenase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253973660|gb|ACT39331.1| predicted oxidoreductase with FAD/NAD(P)-binding domain
[Escherichia coli B str. REL606]
gi|253977854|gb|ACT43524.1| predicted oxidoreductase with FAD/NAD(P)-binding domain
[Escherichia coli BL21(DE3)]
gi|291432662|gb|EFF05641.1| oxidoreductase FixC [Escherichia coli B185]
gi|300461305|gb|EFK24798.1| FAD dependent oxidoreductase [Escherichia coli MS 187-1]
gi|323962083|gb|EGB57679.1| FAD dependent oxidoreductase [Escherichia coli H489]
gi|323973921|gb|EGB69093.1| FAD dependent oxidoreductase [Escherichia coli TA007]
gi|441653003|emb|CCQ03963.1| Probable electron transfer flavoprotein-quinone oxidoreductase FixC
[Escherichia coli O5:K4(L):H4 str. ATCC 23502]
Length = 429
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 137/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNEGVMIVGDAAGF 306
>gi|434407400|ref|YP_007150285.1| geranylgeranyl reductase family protein [Cylindrospermum stagnale
PCC 7417]
gi|428261655|gb|AFZ27605.1| geranylgeranyl reductase family protein [Cylindrospermum stagnale
PCC 7417]
Length = 372
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 140/342 (40%), Gaps = 46/342 (13%)
Query: 69 LAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLD-IIDRKVTKM----KMISPSN 122
LAK G ++E++ L KPCGG + + FD I KV + K+ P
Sbjct: 20 LAKQGRSVLVLEKESLPRYKPCGGGVSPVIAQWFDFDFSPAISVKVDSLRFTWKLGDPVE 79
Query: 123 VAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGA-----SVINGLFMKMDLPRNFEQP 177
+DI E + MVRR+V D +L E+A+K GA + + G+ K D
Sbjct: 80 AKIDI------KEPVWMVRRDVFDHFLVEQAQKQGAELQDNTAVTGIEFKGD-------- 125
Query: 178 YVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
Y + + G + + +I ADGA +AK + D IA ++ E
Sbjct: 126 ----YWQVNTANGPITGRY------LIAADGAKGSMAKWLGFKDRKRRIAGALEAEV--E 173
Query: 238 KMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKI 297
V + A G + + Y W FPK D ++G GT G+ + F+ A+
Sbjct: 174 ANVEKKTTAHFEFG--LLKNGYIWNFPKADGYSIGVGTFI-GGEPQDFKKILDEYAQSFN 230
Query: 298 LGGKIIRVEAHPIPEHPRPRRLSGRVA-LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAII 356
+ K + HP+ ++L + A L G+AA V + EGI + SG + A AI
Sbjct: 231 VDVKTSKQYGHPLCLWDGNQKLHTQNAVLAGEAACVVDPFTAEGIRPSIFSGMLAAGAIN 290
Query: 357 EGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398
E D L KY + ++ + L FYR
Sbjct: 291 EALSG-----DIQALEKYSDAINEQWGSDMAWAQKLAGAFYR 327
>gi|24112904|ref|NP_707414.1| oxidoreductase [Shigella flexneri 2a str. 301]
gi|110805492|ref|YP_689012.1| hypothetical protein SFV_1525 [Shigella flexneri 5 str. 8401]
gi|384543151|ref|YP_005727213.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Shigella flexneri 2002017]
gi|417702130|ref|ZP_12351251.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Shigella flexneri K-218]
gi|417722976|ref|ZP_12371793.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Shigella flexneri K-304]
gi|417728255|ref|ZP_12376974.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Shigella flexneri K-671]
gi|417733379|ref|ZP_12382039.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Shigella flexneri 2747-71]
gi|417736831|ref|ZP_12385445.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Shigella flexneri 4343-70]
gi|417743181|ref|ZP_12391722.1| flavoprotein (electron transport), possibly involved in anaerobic
carnitine metabolism [Shigella flexneri 2930-71]
gi|418255759|ref|ZP_12880040.1| flavoprotein (electron transport), possibly involved in anaerobic
carnitine metabolism [Shigella flexneri 6603-63]
gi|420341635|ref|ZP_14843135.1| FAD binding domain protein [Shigella flexneri K-404]
gi|424837923|ref|ZP_18262560.1| hypothetical protein SF5M90T_1489 [Shigella flexneri 5a str. M90T]
gi|24051850|gb|AAN43121.1| flavoprotein [Shigella flexneri 2a str. 301]
gi|110615040|gb|ABF03707.1| Probable electron transfer flavoprotein-quinone oxidoreductase YdiS
[Shigella flexneri 5 str. 8401]
gi|281600936|gb|ADA73920.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Shigella flexneri 2002017]
gi|332758737|gb|EGJ89056.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Shigella flexneri 2747-71]
gi|332759248|gb|EGJ89557.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Shigella flexneri K-671]
gi|332762561|gb|EGJ92826.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Shigella flexneri 4343-70]
gi|332767239|gb|EGJ97434.1| flavoprotein (electron transport), possibly involved in anaerobic
carnitine metabolism [Shigella flexneri 2930-71]
gi|333004364|gb|EGK23895.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Shigella flexneri K-218]
gi|333018148|gb|EGK37450.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Shigella flexneri K-304]
gi|383466975|gb|EID61996.1| hypothetical protein SF5M90T_1489 [Shigella flexneri 5a str. M90T]
gi|391269671|gb|EIQ28571.1| FAD binding domain protein [Shigella flexneri K-404]
gi|397898601|gb|EJL14984.1| flavoprotein (electron transport), possibly involved in anaerobic
carnitine metabolism [Shigella flexneri 6603-63]
Length = 429
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 137/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNEGVMIVGDAAGF 306
>gi|425305241|ref|ZP_18694986.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli N1]
gi|408229912|gb|EKI53337.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli N1]
Length = 429
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 137/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNEGVMIVGDAAGF 306
>gi|13542326|ref|NP_112014.1| geranylgeranyl reductase [Thermoplasma volcanium GSS1]
gi|14325761|dbj|BAB60664.1| hypothetical protein [Thermoplasma volcanium GSS1]
Length = 374
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 139/338 (41%), Gaps = 58/338 (17%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDIIDR 110
V VIG GP+G AA L+K G++ L+E + KP C G + + LD +
Sbjct: 4 VIVIGAGPSGSYAAYRLSKMGLDVLLLEEHKEVGKPVECTGLVSKRV-------LDFVKT 56
Query: 111 KVTKMKMISPSNVAVDIGQTL---KPHEYIGMVRREVLDAYLRERAEKNGASV-INGLFM 166
+ K + +N+ G+++ K E I ++ R+ D + A GA + IN
Sbjct: 57 RSIAGK-VYGANIYFPNGKSIHVEKNDETI-VLYRDSFDKDVAAMAIGAGADIRINA--R 112
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANS---------RVAKSI 217
+ + N + V Y G+ + VIGADG NS R K +
Sbjct: 113 AISVKENNDSVTVKYRDS--------GQLKEDNAKVVIGADGINSVVRRDLYRIRQEKVV 164
Query: 218 NAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT 277
+ YD A KI DE+ V +Y+G + F+GW P + + VGTG+
Sbjct: 165 STLQYDMA------GKIEDERSV------NVYLGSKYTHGFFGWAVPGGEIIRVGTGS-- 210
Query: 278 HKGDIKKFQLATRNR-AKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKC 336
++ + A R +++LG + IP + R L+GDA G V
Sbjct: 211 YRASAYPYMKALSKRFGTNRVLG-----ITGAGIPIKIAKSLFTKRSVLIGDAGGIVKPL 265
Query: 337 SGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKY 374
SG GIY S + +E + EN D LR Y
Sbjct: 266 SGGGIYTGIFSANLASERVANAIENE----DYSQLRHY 299
>gi|386841783|ref|YP_006246841.1| electron transfer oxidoreductase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374102084|gb|AEY90968.1| electron transfer oxidoreductase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451795076|gb|AGF65125.1| electron transfer oxidoreductase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 427
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 157/369 (42%), Gaps = 45/369 (12%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVGEFDL 103
L++ V V+G GPAG A LAK G++ L+E+ + K CG G P + +
Sbjct: 5 LSDHTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTEFPREKVCGDGLTPRAVKQLVAM 64
Query: 104 PLDIIDR----KVTKMKMISP-SNVAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNG 157
+DI + + +++I S + +D L + G+VR R+ D L A+K G
Sbjct: 65 GIDISEEAGWLRNKGLRIIGGGSRLQLDW-PDLAAYPNYGLVRKRDDFDEQLARNAQKAG 123
Query: 158 ASVINGLFMKMDLPRNFEQPYVLYYT-EYDGTKGGVGEKR---TLEVDAVIGADGANSRV 213
A L+ + N P + T G +GE + T V+ ADG ++R+
Sbjct: 124 AR----LYERC----NVSGPVLDDRTGRITGVTAKLGEDKREVTFHAPLVVAADGNSTRL 175
Query: 214 AKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDFYGWVFPKC 266
+ ++ D +A + P Y E+ E++ D + P YGW+F
Sbjct: 176 SLAMGLHRREDRPMGVAVRTYFHSPRHDDDYLESWLELWDRRGPQDRLLPG-YGWIFGMG 234
Query: 267 DHVA-VGTGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIRVEAHPIPEH 313
D + VG G + K+ +A + + G IR A P+ +
Sbjct: 235 DGTSNVGLGVLNTSASFKELDWREILKAWCASMPEDWGYTPENMTG--PIRGAALPMAFN 292
Query: 314 PRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRK 373
+P G + LVGDA G V +GEGI +A +SG++ A+ I++ T E L++
Sbjct: 293 RQPHYTRG-LLLVGDAGGLVNPFNGEGIAYAMESGQIAADVIVQAHARATPAQREIALQR 351
Query: 374 YLEKWDKTY 382
Y TY
Sbjct: 352 YPRVLKDTY 360
>gi|432583792|ref|ZP_19820193.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE57]
gi|431116962|gb|ELE20234.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE57]
Length = 429
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 134/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 TGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN----AGDYDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S+ + + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVSASNPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
+ +V G V GDI Q + +D I GGK++ AH +P+
Sbjct: 229 NKDSVSLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPKGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVMIVGDAAGF 306
>gi|410455343|ref|ZP_11309225.1| geranylgeranyl reductase [Bacillus bataviensis LMG 21833]
gi|409929344|gb|EKN66424.1| geranylgeranyl reductase [Bacillus bataviensis LMG 21833]
Length = 431
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 149/360 (41%), Gaps = 51/360 (14%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPL-----CMVGEF--DLP 104
V V+G GPAG + A T AKNG+ LIER + K G + ++ EF + P
Sbjct: 7 VIVVGAGPAGTSCALTCAKNGLNVLLIERGEYPGAKNVMGGVLYRKQMEELIPEFWKEAP 66
Query: 105 LD--IIDRKVTKMKMISPSNVAVD-IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVI 161
L+ +++++ M S + ++P+ ++R + D + +A + GA +I
Sbjct: 67 LERPVVEQRFWMMDKESVVQFGYKGLEWAVEPYNNFTVLRAQ-FDQWFAAKAVEAGALLI 125
Query: 162 NGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKR---TLEVDAVIGADGANSRVAKSIN 218
N + + N G GV R + D V+ ADG NS ++K +
Sbjct: 126 NETVVTECIVEN-------------GKVVGVRTDRPDGEVYADVVVLADGVNSLLSKQLG 172
Query: 219 AGDY----DYAIAFQERVKIPDEKMVYYENLAEM------YVGDDVSPDF-YGWVFPKCD 267
+ A+ E + +P EK+ NL + GD + +++ D
Sbjct: 173 FHKEFRPDEVALTVMEVINLPKEKINDRFNLEDNQGCTIEIFGDSTKGNLGTAFLYTNKD 232
Query: 268 HVAVGTGTVTH---KGDIKKFQLATRNR----AKDKILGGKIIRVEAHPIPE---HPRPR 317
+ +G GT K +K ++L + + I GG+ AH IPE PR
Sbjct: 233 SLNIGVGTTLSSMIKAKLKPYELLDYLKKHPMVQPFIAGGESAEYLAHLIPEGGYRSVPR 292
Query: 318 RLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEK 377
V +VGDAA V EG A SG + AE+I+E G E +L Y EK
Sbjct: 293 VAGNGVLVVGDAAQLVNAIHREGSNMAMHSGLLAAESILEAKARGG--YTEANLNIYREK 350
>gi|417827865|ref|ZP_12474428.1| flavoprotein (electron transport), possibly involved in anaerobic
carnitine metabolism [Shigella flexneri J1713]
gi|420320226|ref|ZP_14822064.1| FAD binding domain protein [Shigella flexneri 2850-71]
gi|335575698|gb|EGM61975.1| flavoprotein (electron transport), possibly involved in anaerobic
carnitine metabolism [Shigella flexneri J1713]
gi|391251266|gb|EIQ10482.1| FAD binding domain protein [Shigella flexneri 2850-71]
Length = 429
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 137/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNEGVMIVGDAAGF 306
>gi|345008464|ref|YP_004810818.1| geranylgeranyl reductase [Streptomyces violaceusniger Tu 4113]
gi|344034813|gb|AEM80538.1| geranylgeranyl reductase [Streptomyces violaceusniger Tu 4113]
Length = 436
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 156/369 (42%), Gaps = 45/369 (12%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCG-GAIPLCMVGEFDL 103
++ R+ V V+G GPAG A LAK G++ L+E+ K CG G P +
Sbjct: 14 ISERSADVIVVGAGPAGSTTAYHLAKAGLDVVLLEKTAFPREKVCGDGLTPRATKQLVAM 73
Query: 104 PLDIIDR----KVTKMKMISPSNVAVDIGQT-LKPHEYIGMVR-REVLDAYLRERAEKNG 157
+DI + + +++I+ V + + L + G+VR R+ D L +A+K G
Sbjct: 74 GIDISEEAGWLRNRGLRIIA-GGVRLQLDWPDLAAYPNYGLVRKRDDFDEQLARQAQKAG 132
Query: 158 ASVINGLFMKMDLPRNFEQPYVLYYT-EYDGTKGGVGEKRT---LEVDAVIGADGANSRV 213
A + N P T G +GE++T V+ ADG ++R+
Sbjct: 133 ARLYERC--------NVGAPITDERTGRITGVHAKLGEEKTPVAFHAPLVVAADGNSTRL 184
Query: 214 AKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDFYGWVFPKC 266
+ ++ D +A + P Y E+ E++ D + P YGW+F
Sbjct: 185 SLAMGLHRREDRPMGVAVRTYFTSPRHDDDYLESWLELWDRRGAQDRLLPG-YGWIFGMG 243
Query: 267 DHVA-VGTGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIRVEAHPIPEH 313
D + VG G + K+ +A + + G IR A P+ +
Sbjct: 244 DGTSNVGLGVLNTSSSFKELDWREVLKAWCASMPEDWGYTPENMTG--PIRGAALPMAFN 301
Query: 314 PRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRK 373
+P G + LVGDA G V +GEGI +A +SG++ A+ I++ T E L++
Sbjct: 302 RQPHYTRG-LLLVGDAGGMVNPFNGEGIAYAMESGQIAADVIVQAHARATAPQRELALQR 360
Query: 374 YLEKWDKTY 382
Y + TY
Sbjct: 361 YPKVLKDTY 369
>gi|16129655|ref|NP_416214.1| predicted oxidoreductase with FAD/NAD(P)-binding domain
[Escherichia coli str. K-12 substr. MG1655]
gi|170081358|ref|YP_001730678.1| hypothetical protein ECDH10B_1835 [Escherichia coli str. K-12
substr. DH10B]
gi|238900914|ref|YP_002926710.1| hypothetical protein BWG_1513 [Escherichia coli BW2952]
gi|300951293|ref|ZP_07165141.1| FAD dependent oxidoreductase [Escherichia coli MS 116-1]
gi|300958582|ref|ZP_07170711.1| FAD dependent oxidoreductase [Escherichia coli MS 175-1]
gi|301027854|ref|ZP_07191156.1| FAD dependent oxidoreductase [Escherichia coli MS 196-1]
gi|301647884|ref|ZP_07247665.1| FAD dependent oxidoreductase [Escherichia coli MS 146-1]
gi|331642297|ref|ZP_08343432.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli H736]
gi|386280764|ref|ZP_10058428.1| hypothetical protein ESBG_00984 [Escherichia sp. 4_1_40B]
gi|386595489|ref|YP_006091889.1| electron-transferring-flavoprotein dehydrogenase [Escherichia coli
DH1]
gi|387612188|ref|YP_006115304.1| putative flavoprotein [Escherichia coli ETEC H10407]
gi|387621417|ref|YP_006129044.1| hypothetical protein ECDH1ME8569_1643 [Escherichia coli DH1]
gi|388477773|ref|YP_489961.1| oxidoreductase [Escherichia coli str. K-12 substr. W3110]
gi|417261934|ref|ZP_12049422.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 2.3916]
gi|417272123|ref|ZP_12059472.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 2.4168]
gi|417276971|ref|ZP_12064297.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 3.2303]
gi|417291644|ref|ZP_12078925.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli B41]
gi|417613063|ref|ZP_12263525.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli STEC_EH250]
gi|417618244|ref|ZP_12268665.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli G58-1]
gi|417634607|ref|ZP_12284821.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli STEC_S1191]
gi|417943369|ref|ZP_12586617.1| oxidoreductase [Escherichia coli XH140A]
gi|417974795|ref|ZP_12615596.1| oxidoreductase [Escherichia coli XH001]
gi|418302958|ref|ZP_12914752.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli UMNF18]
gi|418957943|ref|ZP_13509866.1| FAD dependent oxidoreductase [Escherichia coli J53]
gi|419142334|ref|ZP_13687081.1| FAD binding domain protein [Escherichia coli DEC6A]
gi|419148311|ref|ZP_13692988.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC6B]
gi|419153793|ref|ZP_13698365.1| FAD binding domain protein [Escherichia coli DEC6C]
gi|419159187|ref|ZP_13703696.1| FAD binding domain protein [Escherichia coli DEC6D]
gi|419164405|ref|ZP_13708862.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC6E]
gi|419809841|ref|ZP_14334725.1| oxidoreductase [Escherichia coli O32:H37 str. P4]
gi|419941782|ref|ZP_14458440.1| hypothetical protein EC75_20664 [Escherichia coli 75]
gi|422766264|ref|ZP_16819991.1| FAD dependent oxidoreductase [Escherichia coli E1520]
gi|422772425|ref|ZP_16826113.1| FAD dependent oxidoreductase [Escherichia coli E482]
gi|422817019|ref|ZP_16865233.1| hypothetical protein ESMG_01545 [Escherichia coli M919]
gi|425115074|ref|ZP_18516882.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli 8.0566]
gi|425119798|ref|ZP_18521504.1| FAD binding domain protein [Escherichia coli 8.0569]
gi|425272799|ref|ZP_18664233.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli TW15901]
gi|425283283|ref|ZP_18674344.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli TW00353]
gi|432416919|ref|ZP_19659530.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE44]
gi|432563892|ref|ZP_19800483.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE51]
gi|432580443|ref|ZP_19816869.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE56]
gi|432627285|ref|ZP_19863265.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE77]
gi|432636921|ref|ZP_19872797.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE81]
gi|432660932|ref|ZP_19896578.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE111]
gi|432685486|ref|ZP_19920788.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE156]
gi|432691635|ref|ZP_19926866.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE161]
gi|432704452|ref|ZP_19939556.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE171]
gi|432737189|ref|ZP_19971955.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE42]
gi|432955133|ref|ZP_20147073.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE197]
gi|433047976|ref|ZP_20235346.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE120]
gi|442593381|ref|ZP_21011332.1| flavoprotein [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|450244239|ref|ZP_21900202.1| oxidoreductase [Escherichia coli S17]
gi|2829655|sp|P77337.1|YDIS_ECOLI RecName: Full=Probable electron transfer flavoprotein-quinone
oxidoreductase YdiS
gi|1742778|dbj|BAA15468.1| predicted oxidoreductase, FAD/NAD(P)-binding domain [Escherichia
coli str. K12 substr. W3110]
gi|1787991|gb|AAC74769.1| putative oxidoreductase with FAD/NAD(P)-binding domain [Escherichia
coli str. K-12 substr. MG1655]
gi|169889193|gb|ACB02900.1| predicted oxidoreductase with FAD/NAD(P)-binding domain
[Escherichia coli str. K-12 substr. DH10B]
gi|238862752|gb|ACR64750.1| predicted oxidoreductase with FAD/NAD(P)-binding domain
[Escherichia coli BW2952]
gi|260449178|gb|ACX39600.1| Electron-transferring-flavoprotein dehydrogenase [Escherichia coli
DH1]
gi|299879039|gb|EFI87250.1| FAD dependent oxidoreductase [Escherichia coli MS 196-1]
gi|300314764|gb|EFJ64548.1| FAD dependent oxidoreductase [Escherichia coli MS 175-1]
gi|300449445|gb|EFK13065.1| FAD dependent oxidoreductase [Escherichia coli MS 116-1]
gi|301073996|gb|EFK88802.1| FAD dependent oxidoreductase [Escherichia coli MS 146-1]
gi|309701924|emb|CBJ01236.1| putative flavoprotein [Escherichia coli ETEC H10407]
gi|315136340|dbj|BAJ43499.1| hypothetical protein ECDH1ME8569_1643 [Escherichia coli DH1]
gi|323937302|gb|EGB33581.1| FAD dependent oxidoreductase [Escherichia coli E1520]
gi|323940634|gb|EGB36825.1| FAD dependent oxidoreductase [Escherichia coli E482]
gi|331039095|gb|EGI11315.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli H736]
gi|339415056|gb|AEJ56728.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli UMNF18]
gi|342364695|gb|EGU28794.1| oxidoreductase [Escherichia coli XH140A]
gi|344195404|gb|EGV49473.1| oxidoreductase [Escherichia coli XH001]
gi|345363529|gb|EGW95671.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli STEC_EH250]
gi|345378551|gb|EGX10481.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli G58-1]
gi|345388098|gb|EGX17909.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli STEC_S1191]
gi|359332178|dbj|BAL38625.1| predicted oxidoreductase, FAD/NAD(P)-binding domain [Escherichia
coli str. K-12 substr. MDS42]
gi|377995827|gb|EHV58939.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC6B]
gi|377996643|gb|EHV59751.1| FAD binding domain protein [Escherichia coli DEC6A]
gi|377999480|gb|EHV62561.1| FAD binding domain protein [Escherichia coli DEC6C]
gi|378009231|gb|EHV72187.1| FAD binding domain protein [Escherichia coli DEC6D]
gi|378010487|gb|EHV73432.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC6E]
gi|384379552|gb|EIE37420.1| FAD dependent oxidoreductase [Escherichia coli J53]
gi|385157403|gb|EIF19395.1| oxidoreductase [Escherichia coli O32:H37 str. P4]
gi|385539690|gb|EIF86522.1| hypothetical protein ESMG_01545 [Escherichia coli M919]
gi|386121947|gb|EIG70560.1| hypothetical protein ESBG_00984 [Escherichia sp. 4_1_40B]
gi|386225061|gb|EII47396.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 2.3916]
gi|386235823|gb|EII67799.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 2.4168]
gi|386240460|gb|EII77384.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 3.2303]
gi|386253966|gb|EIJ03656.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli B41]
gi|388399669|gb|EIL60453.1| hypothetical protein EC75_20664 [Escherichia coli 75]
gi|408194467|gb|EKI19945.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli TW15901]
gi|408203211|gb|EKI28268.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli TW00353]
gi|408569492|gb|EKK45479.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli 8.0566]
gi|408570739|gb|EKK46695.1| FAD binding domain protein [Escherichia coli 8.0569]
gi|430940281|gb|ELC60464.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE44]
gi|431094879|gb|ELE00507.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE51]
gi|431105274|gb|ELE09609.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE56]
gi|431163978|gb|ELE64379.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE77]
gi|431171910|gb|ELE72061.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE81]
gi|431200048|gb|ELE98774.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE111]
gi|431222521|gb|ELF19797.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE156]
gi|431227110|gb|ELF24247.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE161]
gi|431243758|gb|ELF38086.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE171]
gi|431284289|gb|ELF75147.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE42]
gi|431467804|gb|ELH47810.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE197]
gi|431566359|gb|ELI39395.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE120]
gi|441606867|emb|CCP96659.1| flavoprotein [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|449321592|gb|EMD11603.1| oxidoreductase [Escherichia coli S17]
Length = 429
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 137/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNEGVMIVGDAAGF 306
>gi|14521810|ref|NP_127286.1| geranylgeranyl hydrogenase related [Pyrococcus abyssi GE5]
gi|5459030|emb|CAB50516.1| Flavoprotein monooxygenase, putative [Pyrococcus abyssi GE5]
gi|380742439|tpe|CCE71073.1| TPA: geranylgeranyl hydrogenase related [Pyrococcus abyssi GE5]
Length = 370
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 135/320 (42%), Gaps = 48/320 (15%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLDII 108
N +IGGGP G A LA + ++ERK K C G I LP I
Sbjct: 2 NYDALIIGGGPVGNYLASLLAGK-MSVAVVERKGAFGGKACTGIIGAENYESLGLPDKAI 60
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
IS + V +I + + P Y +V R+VL+ L +RA K GA
Sbjct: 61 LNAFKGAFFISKTKV-FEIHRQV-PQAY--LVDRKVLERELAKRAIKRGAD--------- 107
Query: 169 DLPRNFEQPYVLYY--TEYDGTKGG------VGEKRTLEVDAVIGADGANSRVAKSINAG 220
YY T + G K G + + ++ +GADG NS+VA+ I A
Sbjct: 108 ------------YYLATNFVGFKDGKAILQHLDSRFEIKAKYYVGADGVNSKVAQEIGAK 155
Query: 221 DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHK 279
+ E + + + E++V D++P+F+ WV P + A +GT
Sbjct: 156 TRGEVLRGWELEVLGN----FRREWVEVWVNKDINPEFFFWVAPINEEEARIGTF----- 206
Query: 280 GDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGE 339
GD++ + R +I ++ +++ + R + VALVGDAA ++ +
Sbjct: 207 GDVESLAKFLKVR---RINPSNVLEIKSGAVVLGWRSPWVKDNVALVGDAALHIKPTTAG 263
Query: 340 GIYFAAKSGRMCAEAIIEGS 359
GI F + R A+AI+ G+
Sbjct: 264 GIVFGSYCARALAKAILNGN 283
>gi|350568072|ref|ZP_08936477.1| electron transfer oxidoreductase [Propionibacterium avidum ATCC
25577]
gi|348661936|gb|EGY78610.1| electron transfer oxidoreductase [Propionibacterium avidum ATCC
25577]
Length = 428
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 134/324 (41%), Gaps = 36/324 (11%)
Query: 64 AAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVGEFDLPLDIIDR---KVTKMKMI 118
A A LA+ G+ L+E+ K CG G P + L +D+ + K T+ I
Sbjct: 28 ATAAHLARRGLHVTLLEKATFPRDKVCGDGLTPRAVKQLIRLGIDVSEEAGWKHTEGLRI 87
Query: 119 SPSNVAVDI--GQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMKMDLPRNFE 175
+A + L + GMV RR VLD L AE G +++ G N
Sbjct: 88 HGGRIASFVLPWPELADYPNFGMVCRRTVLDERLARHAESQGVTLVEGA--------NVT 139
Query: 176 QPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYD---YAIAFQERV 232
+P + G + + R V+ ADG +SR+ ++ D +A +
Sbjct: 140 EPILAPNDRIRGVR--TADGRVYSAPVVVAADGNSSRLGLAMGLHKRDDRPMGVAVRAYY 197
Query: 233 KIPDEKMVYYENLAEMYVGDDVSPDF---YGWVFPKCD-HVAVGTGTVTHK---GDIKKF 285
+ P + E+ E++ G D YGW FP+ D V +G G + G
Sbjct: 198 RSPLSEARNLESWLELWDGAPHESDLLPGYGWAFPEGDGTVNIGLGMLNSSDAFGHTDYR 257
Query: 286 QLATRNRAK-------DKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSG 338
L R + D+ IR A P+ + +P L+G + LVGDA G V +G
Sbjct: 258 SLMKRWLSHMPAEWTLDEEHREGPIRGAALPMAFNRQPHYLNG-LLLVGDAGGMVNPFNG 316
Query: 339 EGIYFAAKSGRMCAEAIIEGSENG 362
EGI +A ++G M A+AI E G
Sbjct: 317 EGIDYAMEAGEMAADAIAEAHYRG 340
>gi|119720105|ref|YP_920600.1| geranylgeranyl reductase [Thermofilum pendens Hrk 5]
gi|119525225|gb|ABL78597.1| geranylgeranyl reductase [Thermofilum pendens Hrk 5]
Length = 423
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 152/357 (42%), Gaps = 58/357 (16%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC-KPCGGAIPLCMVGEFDL-----PLD 106
+ V+GGGPAG +AA A+ G+ ++E+ N K CGG I + L+
Sbjct: 4 LVVVGGGPAGSSAAIAAARAGLSVVVLEKGERNRDKYCGGGISVLTQNSLRELGAAEALE 63
Query: 107 IIDRKVTKMKMISPSN-VAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
+ ++ P V VD P G+VRR V DA LRE AE GA+V +G
Sbjct: 64 TFENYAEGHVLVLPGEKVLVDA----IPGLGYGLVRRSVFDAKLRELAESYGATVKHG-- 117
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKR--TLEVDAVIGADGANSRVAKSI------ 217
FE + DG K V ++ +E + A GA + +++
Sbjct: 118 --------FEASSI----TVDGDKVVVRSRKGEVVEGRYAVVATGAGNFPERALGFPPLR 165
Query: 218 --NAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGT 275
N G + + + V E+ + +++ Y WVFPK +H+ VG GT
Sbjct: 166 PENLG-HCWGTEAEYPVSAEVERWRHEYGFTPIFLMFGFVTYGYMWVFPKRNHMNVGMGT 224
Query: 276 VTHK----------GDIKKFQLATRNRAKDKILG--GKIIRVEAHPIPEHPRPRRLSG-- 321
+ G + +LA R IL G++ + IP PR S
Sbjct: 225 TLAESARYGRLHLEGFARGLELARRM----GILSEPGRLRVDRSWLIPGKPRAVTYSQER 280
Query: 322 RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKW 378
RV L GDAAG+V +GEGI A +SGR+ AE + + + D G L++Y KW
Sbjct: 281 RVLLAGDAAGFVHPLTGEGISGAVRSGRLAAETVKQALDKE----DPGLLKEYEAKW 333
>gi|282163838|ref|YP_003356223.1| putative geranylgeranyl reductase [Methanocella paludicola SANAE]
gi|282156152|dbj|BAI61240.1| putative geranylgeranyl reductase [Methanocella paludicola SANAE]
Length = 394
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 144/355 (40%), Gaps = 73/355 (20%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPL-DIID 109
V V+G GPAG AA+ AKNG T LIE P C G I + + E +LP + I+
Sbjct: 5 VVVVGAGPAGSMAAKYAAKNGARTLLIEEHAMIGSPVSCTGHISVKALNECELPEGNFIN 64
Query: 110 RKVTKMKMISPS--NVAVDIGQTLKPHEYIGMVRREV------------LDAYLRERAEK 155
+++ + +P+ ++ +D +T+ ++ RE+ +D +R +
Sbjct: 65 KRIRGAFVYAPNYHSIPIDGKRTMTYVVERKIMDREMAKAAASAGAEIWVDTAVRSVKKV 124
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
NG V+ + G++ + VIGADG S VAK
Sbjct: 125 NGGVVLEAV--------------------------SEGKRTEIPAKVVIGADGVKSMVAK 158
Query: 216 SINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPK---CDHVAVG 272
S G + A +++ + E+++G P F+ W P C + +
Sbjct: 159 SAGLGRIPHVCA---GIQVEASYEPRDDEFVEVFLGQRYVPKFFAWAVPTSGDCCRIGLN 215
Query: 273 TGTVTH---KGDIKKFQLATRNR--AKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVG 327
+ H +K+ ++ ++ D I+GG IP ++ V +VG
Sbjct: 216 ADSDAHMYLDRLLKEHEIVSKKARGTVDLIMGG---------IPVGTLKSTVTDGVLIVG 266
Query: 328 DAAGYVTKCSGEGIYFAAK----SGRMCAEAIIEGSENGTRMIDEGDLRKYLEKW 378
DAAG V S GIY + +G + A+A IE + R L++Y +W
Sbjct: 267 DAAGQVKPVSYGGIYMGTRCAKIAGEVAAKAAIEDNVCSAR------LKEYERRW 315
>gi|218699737|ref|YP_002407366.1| hypothetical protein ECIAI39_1358 [Escherichia coli IAI39]
gi|386624318|ref|YP_006144046.1| putative oxidoreductase with FAD/NAD(P)-binding domain [Escherichia
coli O7:K1 str. CE10]
gi|218369723|emb|CAR17492.1| putative oxidoreductase subunit with FAD/NAD(P)-binding domain
[Escherichia coli IAI39]
gi|349738056|gb|AEQ12762.1| putative oxidoreductase with FAD/NAD(P)-binding domain [Escherichia
coli O7:K1 str. CE10]
Length = 429
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 137/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMAQAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTDESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQIKDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNEGVMIVGDAAGF 306
>gi|432504430|ref|ZP_19746160.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE220]
gi|432999940|ref|ZP_20188470.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE223]
gi|433125190|ref|ZP_20310765.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE160]
gi|433139253|ref|ZP_20324524.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE167]
gi|433149201|ref|ZP_20334237.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE174]
gi|431039413|gb|ELD50233.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE220]
gi|431509957|gb|ELH88204.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE223]
gi|431646575|gb|ELJ14067.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE160]
gi|431661631|gb|ELJ28443.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE167]
gi|431671865|gb|ELJ38138.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE174]
Length = 429
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 135/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDALVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 S---INAGD-YDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S ++A D + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVSASDPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
+ +V G V DI Q + +D I GGK++ AH +PE
Sbjct: 229 NKDSVSLGLVCGLSDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVMIVGDAAGF 306
>gi|340344524|ref|ZP_08667656.1| Geranylgeranyl reductase [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339519665|gb|EGP93388.1| Geranylgeranyl reductase [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 408
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 148/348 (42%), Gaps = 47/348 (13%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
+ V+GGGPAG +AA +KNG++ LIE++ + G + + EF +P D +
Sbjct: 9 LVVVGGGPAGSSAAFEASKNGIKVALIEKEEIIAQSVRTSGVTWIQNIKEFGIPDDCYN- 67
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+ SP+N V I T+ H + VR+ +L E+A+ G + F+K +
Sbjct: 68 PIKNYSFCSPNN-EVTISDTVS-HAAVLDVRKTY--RWLAEQAKNEGVDI----FLKTSI 119
Query: 171 PRNFEQPYVLYYTEYDGTKGGV-GEKRTLEV----DAVIGADGANSRVAKSINAGDYDYA 225
+ +G GV G + E+ +I A G +S ++K D +
Sbjct: 120 KNAIKNK--------EGDIIGVSGTSKDGEIIFYAKIIIDATGFSSTISK-----DMGFV 166
Query: 226 IAFQERVKIPDEKMVYYENLAE----MYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKG 280
+ ER E V EN+ + VG SP Y W+FP ++ +G G +
Sbjct: 167 TQW-ERFGAGAEYEVSAENVDSETWWLMVGQKYSPSGYAWIFPVGRNIVRIGVGIGKPES 225
Query: 281 DIKKFQLATRNRAKDKILG-----GKIIRVEAH--PIPEHPRPRR-LSGRVALVGDAAGY 332
I + D +G GKI +E H IP R+ + + LVGD+AG
Sbjct: 226 SIDPTE--RLKELMDSKIGPIKKLGKITPIEFHYGLIPNDGLSRKTVYNNLILVGDSAGQ 283
Query: 333 VTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDK 380
EGI +A K GR+ + ++G + +E L Y E W K
Sbjct: 284 ANPLVLEGIRYAIKYGRVAGKVAATAIKSG--ITNESALYPYEETWKK 329
>gi|440701423|ref|ZP_20883614.1| geranylgeranyl reductase family protein [Streptomyces
turgidiscabies Car8]
gi|440275923|gb|ELP64264.1| geranylgeranyl reductase family protein [Streptomyces
turgidiscabies Car8]
Length = 427
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 152/365 (41%), Gaps = 37/365 (10%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVGEFDL 103
L+ V V+G GPAG A LAK G++ L+E+ K CG G P +
Sbjct: 5 LSENTADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTSFPREKVCGDGLTPRATKQLVAM 64
Query: 104 PLDIIDR----KVTKMKMISPS-NVAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNG 157
+DI + + +++I + +D + +Y G+VR R+ D L +A+K G
Sbjct: 65 GIDISEEAGWLRNKGLRIIGGGVRLQLDWPELASFPDY-GLVRKRDDFDEQLARQAQKAG 123
Query: 158 ASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSI 217
A L+ + ++ T G + T V+ ADG ++R++ ++
Sbjct: 124 AR----LYERCNVGAPITDDRTGRITGVHAKLGEDKRQVTFHAPLVVAADGNSTRLSLAM 179
Query: 218 NAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDFYGWVFPKCDHVA 270
D +A + P + Y E+ E++ D + P YGW+F D +
Sbjct: 180 GLHRREDRPMGVAVRTYFTSPRHEDDYLESWLELWDRRGAEDRLLPG-YGWIFGMGDGTS 238
Query: 271 -VGTGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIRVEAHPIPEHPRPR 317
VG G + K+ +A D + G IR A P+ + +P
Sbjct: 239 NVGLGVLNTSDSFKELDWREVLKAWCASMPEDWGYTPDNMTG--PIRGAALPMAFNRQPH 296
Query: 318 RLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEK 377
G + LVGDA G V +GEGI +A +SG++ A+ I++ T E L++Y
Sbjct: 297 YTKG-LLLVGDAGGLVNPFNGEGIAYAMESGQIAADVIVQAHARATPAQREIALQRYPRV 355
Query: 378 WDKTY 382
TY
Sbjct: 356 LKDTY 360
>gi|170019951|ref|YP_001724905.1| hypothetical protein EcolC_1932 [Escherichia coli ATCC 8739]
gi|312969728|ref|ZP_07783911.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli 1827-70]
gi|432485450|ref|ZP_19727366.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE212]
gi|432670777|ref|ZP_19906308.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE119]
gi|433173559|ref|ZP_20358094.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE232]
gi|169754879|gb|ACA77578.1| Electron-transferring-flavoprotein dehydrogenase [Escherichia coli
ATCC 8739]
gi|310338013|gb|EFQ03102.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli 1827-70]
gi|431015847|gb|ELD29394.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE212]
gi|431210851|gb|ELF08834.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE119]
gi|431693825|gb|ELJ59219.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE232]
Length = 429
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 136/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEHAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILETNVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNEGVMIVGDAAGF 306
>gi|410720850|ref|ZP_11360200.1| geranylgeranyl reductase family protein [Methanobacterium sp.
Maddingley MBC34]
gi|410600124|gb|EKQ54657.1| geranylgeranyl reductase family protein [Methanobacterium sp.
Maddingley MBC34]
Length = 393
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 153/365 (41%), Gaps = 63/365 (17%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIP---LCMVGEFDLPLDI 107
+ +IG GPAG AA+ A NG + L+++K + P C + L +G P
Sbjct: 6 ILIIGAGPAGSMAAKHAALNGAKVLLVDKKSEIGAPKRCAEGVSKDGLKKLGVTPNP-RW 64
Query: 108 IDRKVTKMKMISPSNVAVDIGQ-TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFM 166
I + K++++SP+ V + + +K E ++ R+V D +L A + GA + +
Sbjct: 65 ITSDINKVRLVSPNGTDVLLDEDKVKLSEMGYVLERKVFDKHLAMDAARAGAQI---MVK 121
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDA--VIGADGANSRVAK------SIN 218
+ + E ++ E+ GT E+ A VIGADG SRV + +
Sbjct: 122 TLATGMSKENDGIIVQMEHMGT--------PFEIKAKIVIGADGPESRVGRWAGLKTGLK 173
Query: 219 AGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVT 277
G+ + F E V + + E+ G +P Y W+FPK + +A VG G ++
Sbjct: 174 PGNMESCAQF-EMVGVD----MKQPGCLELIFGSS-APGGYAWIFPKGEDIANVGLGILS 227
Query: 278 HKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL---------------SGR 322
+K D +Q V+ +P ++ +P L +
Sbjct: 228 NKTDKTAYQHLLE-------------FVDKYPGTQNAQPVELNVGGDPVGGLHKELVTDN 274
Query: 323 VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTY 382
V + GDAAG V G GI GR+ + + +G + +L++Y ++ K
Sbjct: 275 VLITGDAAGMVNPLDGGGIISGMTGGRIAGKVAAQAISDGD--YSKKNLKEYQKRCQKEI 332
Query: 383 WPTYK 387
++K
Sbjct: 333 GDSFK 337
>gi|300918071|ref|ZP_07134691.1| FAD dependent oxidoreductase [Escherichia coli MS 115-1]
gi|300414733|gb|EFJ98043.1| FAD dependent oxidoreductase [Escherichia coli MS 115-1]
Length = 429
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 137/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R +D +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRMDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLEMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNDGVMIVGDAAGF 306
>gi|452910192|ref|ZP_21958873.1| geranylgeranyl reductase [Kocuria palustris PEL]
gi|452834439|gb|EME37239.1| geranylgeranyl reductase [Kocuria palustris PEL]
Length = 443
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 142/340 (41%), Gaps = 39/340 (11%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPLCMVGEF---DLPLD 106
++V + GGGPAG AA LA +G E ++E+ K CG + V E DLP
Sbjct: 1 MKVVIAGGGPAGSTAAYWLAAHGHEVVVLEKTAHPREKVCGDGLTPRAVHEMQLMDLPHG 60
Query: 107 IID-RKVTKMKMISPSNVAVDI-GQTLKPHEYIGMVR-REVLDAYLRERAEKNGASVING 163
+ + + + + + A+++ L G+VR R D +L AE GA +I
Sbjct: 61 VQNGYRANRGLRLCARDRAIEVPWPELTDFPSYGLVRPRSGFDQHLARHAEAAGARLIEH 120
Query: 164 LFMKMDLPRNFEQPYVLYYTEYDGTKGG-VGEKRTLEVDAVIGADGANSRVAKSINAG-- 220
+ + R+ + + G G GE D V+ ADG +SR A S
Sbjct: 121 RSVT-SVVRDDDGRVIGADASVLGADGRRTGETERHLGDLVLAADGVSSRTAVSSGLHRD 179
Query: 221 -DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDF---YGWVFPKCDHVA-VGTGT 275
D +A + + P + + E E+ G D S YGWVF D A VG G
Sbjct: 180 PDRLMGVAVRGYYESPRTDIEWMEGWLELRDGTDPSGSLLPGYGWVFGAGDGTANVGLGM 239
Query: 276 VTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPI--PEHPRPRRLSGRVA--------- 324
++ K F R ++L + + PEH R R LS +
Sbjct: 240 LSTS---KAF----RGTDYRRVLQDWAASMPSQWTFDPEHQRGRILSAALPMAFSRTPHW 292
Query: 325 -----LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGS 359
L+GD+AG V+ +GEGI A +S R+ AE I E +
Sbjct: 293 VPGMMLLGDSAGLVSAFNGEGISNAMQSARLAAEQIHEAA 332
>gi|188493195|ref|ZP_03000465.1| protein FixC homolog [Escherichia coli 53638]
gi|188488394|gb|EDU63497.1| protein FixC homolog [Escherichia coli 53638]
Length = 429
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 136/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEHAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILETNVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNEGVMIVGDAAGF 306
>gi|26247950|ref|NP_753990.1| hypothetical protein c2095 [Escherichia coli CFT073]
gi|227885880|ref|ZP_04003685.1| oxidoreductase with FAD/NAD(P)-binding domain protein [Escherichia
coli 83972]
gi|300994841|ref|ZP_07180954.1| FAD dependent oxidoreductase [Escherichia coli MS 45-1]
gi|301050969|ref|ZP_07197815.1| FAD dependent oxidoreductase [Escherichia coli MS 185-1]
gi|386629391|ref|YP_006149111.1| hypothetical protein i02_1917 [Escherichia coli str. 'clone D i2']
gi|386634311|ref|YP_006154030.1| hypothetical protein i14_1917 [Escherichia coli str. 'clone D i14']
gi|386639228|ref|YP_006106026.1| FixC-like protein [Escherichia coli ABU 83972]
gi|422366801|ref|ZP_16447258.1| FAD dependent oxidoreductase [Escherichia coli MS 153-1]
gi|432411919|ref|ZP_19654585.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE39]
gi|432431852|ref|ZP_19674284.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE187]
gi|432436128|ref|ZP_19678521.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE188]
gi|432456730|ref|ZP_19698917.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE201]
gi|432495721|ref|ZP_19737520.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE214]
gi|432523806|ref|ZP_19760938.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE230]
gi|432568697|ref|ZP_19805215.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE53]
gi|432592872|ref|ZP_19829191.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE60]
gi|432607527|ref|ZP_19843716.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE67]
gi|432651138|ref|ZP_19886895.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE87]
gi|432783582|ref|ZP_20017763.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE63]
gi|432844517|ref|ZP_20077416.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE141]
gi|432978305|ref|ZP_20167127.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE209]
gi|432995364|ref|ZP_20183975.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE218]
gi|433058088|ref|ZP_20245147.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE124]
gi|433087235|ref|ZP_20273619.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE137]
gi|433115553|ref|ZP_20301357.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE153]
gi|433207798|ref|ZP_20391481.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE97]
gi|433212506|ref|ZP_20396109.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE99]
gi|442604362|ref|ZP_21019207.1| Probable electron transfer flavoprotein-quinone oxidoreductase FixC
[Escherichia coli Nissle 1917]
gi|26108353|gb|AAN80555.1|AE016761_130 Probable electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli CFT073]
gi|227837453|gb|EEJ47919.1| oxidoreductase with FAD/NAD(P)-binding domain protein [Escherichia
coli 83972]
gi|300297346|gb|EFJ53731.1| FAD dependent oxidoreductase [Escherichia coli MS 185-1]
gi|300406181|gb|EFJ89719.1| FAD dependent oxidoreductase [Escherichia coli MS 45-1]
gi|307553720|gb|ADN46495.1| FixC-like protein [Escherichia coli ABU 83972]
gi|315290519|gb|EFU49893.1| FAD dependent oxidoreductase [Escherichia coli MS 153-1]
gi|355420290|gb|AER84487.1| hypothetical protein i02_1917 [Escherichia coli str. 'clone D i2']
gi|355425210|gb|AER89406.1| hypothetical protein i14_1917 [Escherichia coli str. 'clone D i14']
gi|430935145|gb|ELC55467.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE39]
gi|430953401|gb|ELC72299.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE187]
gi|430964550|gb|ELC81997.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE188]
gi|430982612|gb|ELC99301.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE201]
gi|431024264|gb|ELD37429.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE214]
gi|431052908|gb|ELD62544.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE230]
gi|431100548|gb|ELE05518.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE53]
gi|431128657|gb|ELE30839.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE60]
gi|431138625|gb|ELE40437.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE67]
gi|431191007|gb|ELE90392.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE87]
gi|431329450|gb|ELG16736.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE63]
gi|431394844|gb|ELG78357.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE141]
gi|431480477|gb|ELH60196.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE209]
gi|431507077|gb|ELH85363.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE218]
gi|431570731|gb|ELI43639.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE124]
gi|431606955|gb|ELI76326.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE137]
gi|431635079|gb|ELJ03294.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE153]
gi|431730810|gb|ELJ94369.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE97]
gi|431734788|gb|ELJ98164.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE99]
gi|441714619|emb|CCQ05184.1| Probable electron transfer flavoprotein-quinone oxidoreductase FixC
[Escherichia coli Nissle 1917]
Length = 429
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 135/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 S---INAGD-YDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S ++A D + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVSASDPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
+ +V G V DI Q + +D I GGK++ AH +PE
Sbjct: 229 NKDSVSLGLVCGLSDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVMIVGDAAGF 306
>gi|432898617|ref|ZP_20109309.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE192]
gi|433028571|ref|ZP_20216433.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE109]
gi|431426269|gb|ELH08313.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE192]
gi|431543680|gb|ELI18646.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE109]
Length = 429
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 133/318 (41%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
I+RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPIERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN----AGDYDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S+ + + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVSASNPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
+ +V G V DI Q + +D I GGK++ AH +PE
Sbjct: 229 NKDSVSLGLVCGLSDISHAQKSVPQMLEDFKQHPAIGPLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVMIVGDAAGF 306
>gi|417628814|ref|ZP_12279054.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli STEC_MHI813]
gi|345374028|gb|EGX05981.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli STEC_MHI813]
Length = 429
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 136/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEHAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNEGVMIVGDAAGF 306
>gi|302553424|ref|ZP_07305766.1| electron transfer oxidoreductase [Streptomyces viridochromogenes
DSM 40736]
gi|302471042|gb|EFL34135.1| electron transfer oxidoreductase [Streptomyces viridochromogenes
DSM 40736]
Length = 430
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 154/370 (41%), Gaps = 47/370 (12%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCG-GAIPLCMVGEFDL 103
L+ V V+G GPAG A LAK G++ L+E+ K CG G P + +
Sbjct: 8 LSENTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAFPREKVCGDGLTPRAVKQLVAM 67
Query: 104 PLDIIDR----KVTKMKMISPS-NVAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNG 157
+DI + + +++I + +D +Y G+VR R+ D L +A+K G
Sbjct: 68 GIDISEEAGWLRNKGLRIIGGGVRLQLDWPDLASFPDY-GLVRKRDDFDEQLARQAQKAG 126
Query: 158 ASVINGLFMKMDLPRNFEQPYVLYYT-EYDGTKGGVGEKR---TLEVDAVIGADGANSRV 213
A + N P V T G +GE + T V+ ADG ++R+
Sbjct: 127 ARLYERC--------NVGAPVVDDRTGRITGVHAKLGEDKREVTFHAPLVVAADGNSTRL 178
Query: 214 AKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPD-----FYGWVFPK 265
+ ++ D +A + P + Y E+ E++ D P+ YGW+F
Sbjct: 179 SLAMGLHRREDRPMGVAVRTYFTSPRHEDDYLESWLELW--DRRGPEDRLLPGYGWIFGM 236
Query: 266 CDHVA-VGTGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIRVEAHPIPE 312
D + VG G + K+ +A D + G IR A P+
Sbjct: 237 GDGTSNVGLGVLNTSDSFKELDWREVLKAWCASMPEDWGYTPDHMTG--PIRGAALPMAF 294
Query: 313 HPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLR 372
+ +P G + LVGDA G V +GEGI +A +SG++ A+ I++ T E L+
Sbjct: 295 NRQPHYTKG-LLLVGDAGGLVNPFNGEGIAYAMESGQIAADVIVQAHARPTPAGREMALQ 353
Query: 373 KYLEKWDKTY 382
+Y TY
Sbjct: 354 RYPRVLKDTY 363
>gi|331653099|ref|ZP_08354104.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli M718]
gi|331049197|gb|EGI21269.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli M718]
Length = 429
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 136/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEHAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNEGVMIVGDAAGF 306
>gi|269839308|ref|YP_003324000.1| geranylgeranyl reductase [Thermobaculum terrenum ATCC BAA-798]
gi|269791038|gb|ACZ43178.1| geranylgeranyl reductase [Thermobaculum terrenum ATCC BAA-798]
Length = 413
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 157/366 (42%), Gaps = 60/366 (16%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCG-GAIP--LCMVGEFDLPLDI- 107
V V+G GPAG A A LA++GV L+++ + K CG G P + ++ L ++
Sbjct: 29 VVVVGAGPAGSACAWELARHGVRVLLLDKSEFPRDKTCGDGLTPRAVSVLEGMGLAREVA 88
Query: 108 -IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFM 166
+ +V++++++ P + +G P +V R LD L RA GA
Sbjct: 89 GMGGRVSQVRVVGPGGTSTTLGM---PGRGGLVVPRLRLDDALLRRATSVGA-------- 137
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGV--GEKRTLEVDAVIGADGANSRVAKSINAGDYDY 224
FE P E +G V + R + V+ A GA+ R+ +
Sbjct: 138 ------EFEAPARAEAVELEGQHALVRLEDGRGVRARMVVVATGASPRL--------LER 183
Query: 225 AIAFQERVKIPDEKMVYYE----NLAEM-YVGDDVSPDFYGWVFP-KCDHVAVGTGTVT- 277
+ R ++ Y+E + EM + V+ YGW+FP VG G +
Sbjct: 184 SGLVAARPRLLAASRAYFECPAAQVEEMVFSFQGVTLPGYGWIFPLGGGRFNVGAGVLAR 243
Query: 278 HKGDI--KKFQLATRNRAKDKILGGKIIRVEAHPIPEHP------RPRRLSGRVALVGDA 329
H+G K+F+ TR+R ++L G R E P+ P R R + V +VG+A
Sbjct: 244 HEGSTARKEFEAFTRSRLCSRLLPGA--RREG-PVRGFPLRTDFLRSRLWAPGVVMVGEA 300
Query: 330 AGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDL--RKYLEKWDKTYWPTYK 387
AG V +GEGI +A +SG + + E M+ G++ R Y + + ++
Sbjct: 301 AGLVNPLTGEGIDYALESGVIAGRHVRE-------MLSRGEIEARAYERELRSRFSELFR 353
Query: 388 VLDVLQ 393
+ L+
Sbjct: 354 TCERLR 359
>gi|410671754|ref|YP_006924125.1| geranylgeranyl reductase [Methanolobus psychrophilus R15]
gi|409170882|gb|AFV24757.1| geranylgeranyl reductase [Methanolobus psychrophilus R15]
Length = 404
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 147/343 (42%), Gaps = 39/343 (11%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CG-GAIPLCMVGEFDLPLDIID 109
V VIG GP G +AA+ A+ G+ +IE++ + P C G + + + I
Sbjct: 7 VIVIGAGPGGSSAAKAAAEKGLSVLMIEKRQEIGDPVRCAEGVSKVWLRKHIEPDYRWIC 66
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVI-----NGL 164
V ++ SP +++ + + E ++ R++ D L + K GA V+ GL
Sbjct: 67 ADVKGSRIFSPDGSMIEMAEEIAGGEVGYVLERKIFDRALACESAKAGADVMVKTRATGL 126
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK------SIN 218
++ + + + +GE++ + VIGADG S+V + S+
Sbjct: 127 IIEDHFVKGVKLMH-------------LGEEKAIRSKVVIGADGVESKVGRWAGIDTSLK 173
Query: 219 AGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVT 277
GD + F D+ Y+ Y+G++++P Y WVFPK +A VG G +
Sbjct: 174 PGDIETCAQFLMSGTGIDQNYCYF------YLGNEIAPSGYIWVFPKGQGLANVGIGILG 227
Query: 278 HKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAGYVTKC 336
K K + K K++ ++ +P + ++ + LVGDAA
Sbjct: 228 SKSGKKHAIDYLKEFVAKKYPDAKVLEIDVGGVPVSGSIDKTITNGLMLVGDAARQSDPI 287
Query: 337 SGEGIYFAAKSGRMCAEAIIEG-SENGTRMIDEGDLRKYLEKW 378
+G GI A ++G+M E E S+N + L Y +KW
Sbjct: 288 TGGGIINAMEAGKMAGEVAFEAISKND---VSTASLGLYEKKW 327
>gi|254415725|ref|ZP_05029483.1| FAD dependent oxidoreductase, putative [Coleofasciculus
chthonoplastes PCC 7420]
gi|196177431|gb|EDX72437.1| FAD dependent oxidoreductase, putative [Coleofasciculus
chthonoplastes PCC 7420]
Length = 374
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 129/300 (43%), Gaps = 43/300 (14%)
Query: 69 LAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPL-DIIDRKVTKMKMISPSNVAVD 126
LAK G ++E+ L KPC G + + FD L I V++++ + V+
Sbjct: 20 LAKRGRSVLILEKDSLPRYKPCSGGVSPSVQQWFDFDLAPAIALNVSRVRYTWQMDDPVE 79
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
+ +LK + + MV+R+V D +L E+A++ GA + + + E+
Sbjct: 80 V--SLKKQKPVWMVQRDVFDQFLVEQAKEQGAQL--------------QDQTTVTGIEFK 123
Query: 187 GTKGGVG-EKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYE-- 243
G + V L +I ADGAN +AK + F+ R P V E
Sbjct: 124 GDRWQVNTTNEPLAARYLIAADGANGPMAK---------WLGFKAR---PQRMAVTIEAP 171
Query: 244 NLAEMYVGDDVSPDF------YGWVFPKCDHVAVGTGTVTHKGDIKK-FQLATRNRAKDK 296
N A + DF Y W FPK D +V G T KG+ K+ Q +
Sbjct: 172 NPAPTSSDPTIHFDFGQVKNGYIWNFPKTDSYSVSVG--TFKGNDKQDLQKIGTKYIQQL 229
Query: 297 ILGGKIIRVEAHPIPEHPRPRRLSGRVA-LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
+ K+ +V +HP+ ++L G+ A LVGDAA + EGI + SG AEAI
Sbjct: 230 GVDPKLCQVYSHPMCLWDGNQKLHGQNALLVGDAACLADPFTAEGIRPSIFSGVKAAEAI 289
>gi|15678305|ref|NP_275420.1| bacteriochlorophyll synthase 43 kDa subunit [Methanothermobacter
thermautotrophicus str. Delta H]
gi|74508048|sp|O26377.1|GGR1_METTH RecName: Full=Digeranylgeranylglycerophospholipid reductase 1;
Short=DGGGPL reductase 1; AltName:
Full=2,3-di-O-geranylgeranylglyceryl phosphate reductase
1; AltName: Full=Geranylgeranyl reductase 1; Short=GGR 1
gi|2621328|gb|AAB84783.1| bacteriochlorophyll synthase 43 kDa subunit [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 397
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 180/414 (43%), Gaps = 57/414 (13%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V VIG GPAG AA+ A G + LI++K + P A + + G L ++ R +
Sbjct: 10 VLVIGAGPAGSTAAKHAALGGADVLLIDKKSEIGAPKRCAEGVSIGGLESLGIEPNPRWI 69
Query: 113 TK----MKMISPSNVAVDIGQ---TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
TK ++M+SP+ V + L YI + R+V D ++ A + G+ +
Sbjct: 70 TKKLDGVRMVSPNGTDVWLTSDKVELPEAGYI--LERKVFDKFMAMDAARAGSRI----- 122
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK--SINAG--- 220
M + E+ Y + +GEK ++ VI ADG SRVA+ +N
Sbjct: 123 MVKTIATGMERTDDGYLVSAE----CMGEKFEIKARIVIAADGPESRVARWAGLNTATRP 178
Query: 221 -DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTH 278
D + A F E V + E N E Y G V+P Y P+ D +A VG G ++
Sbjct: 179 KDMESAAQF-EMVGVEMED----NNCIEFYFG-SVAPGGYALDIPEGDDIANVGLGVLST 232
Query: 279 KGDIKKFQL---------ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDA 329
+ D ++ ATRN + + + P+ P+ + ++ + +VGDA
Sbjct: 233 ETDKSAYEHLLEFVESCPATRNAQPVE------LNIGGDPVGGMPK-KLVADSLMVVGDA 285
Query: 330 AGYVTKCSGEGIYFAAK----SGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPT 385
AG V +G GI K +G++ A A+ EG R+ G+ + ++
Sbjct: 286 AGQVNPLTGGGIISGMKGGMLAGQVAAAAVSEGDVTARRL---GEYERLCR--EEIGDEI 340
Query: 386 YKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKL 439
K L V + + S+ ++ E D +K++ + L K+++ +P LKL
Sbjct: 341 SKYLKVKEYLLTLSDSELDSIAEAFQDVEFEKVS-TTELVKKLIKVSPKALLKL 393
>gi|416897614|ref|ZP_11927262.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli STEC_7v]
gi|417115745|ref|ZP_11966881.1| hypothetical protein EC12741_2147 [Escherichia coli 1.2741]
gi|422798986|ref|ZP_16847485.1| FAD dependent oxidoreductase [Escherichia coli M863]
gi|323968468|gb|EGB63874.1| FAD dependent oxidoreductase [Escherichia coli M863]
gi|327252816|gb|EGE64470.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli STEC_7v]
gi|386141164|gb|EIG82316.1| hypothetical protein EC12741_2147 [Escherichia coli 1.2741]
Length = 429
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 135/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDVLEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S+ A D + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEIIGLTPEQINDRFNVMGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
+ +V G V GDI + + +D I GGK++ AH +PE
Sbjct: 229 NKDSVSLGLVCGLGDIAHAKKSVPQMLEDFKQHPAIRSLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNEGVMIVGDAAGF 306
>gi|270308084|ref|YP_003330142.1| hypothetical protein DhcVS_677 [Dehalococcoides sp. VS]
gi|270153976|gb|ACZ61814.1| hypothetical protein DhcVS_677 [Dehalococcoides sp. VS]
Length = 379
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 154/389 (39%), Gaps = 47/389 (12%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDI 107
N + VIG GP G A+ LA+ G E L+ ++ + K C G I + +
Sbjct: 2 NTDILVIGAGPVGIYTAKCLAQCGYEVRLLGKRPEMVKQICCTGLISTECAATYGFHGEY 61
Query: 108 IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERA-----EKNGASVIN 162
I ++ + SP + + + P M+ R A L ++A + N +N
Sbjct: 62 IQNHFSEATVYSPYGRKLLLKRD-TPQAI--MLDRGGFQAGLLKQAVNCGVQTNFGCQVN 118
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDY 222
GL N + TKGG +T A + A G N+ ++++ G+
Sbjct: 119 GL-------ENTGNGICIT------TKGG----QTFFAKAAVLAAGYNTELSRAAGLGEI 161
Query: 223 -DYAIAFQERV--KIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHK 279
+A Q V IP ++ G +S ++GW+ P DH A G +T K
Sbjct: 162 KHFAFGLQGEVDTSIPTA--------LSLFTGKAISQGYFGWLSPINDHAAK-MGLLTRK 212
Query: 280 GDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGE 339
+ + + K ++ + I+ P+P RV VGD AG + +G
Sbjct: 213 NPNECWSILHNTIYKQGLIPDRNIKYACRPVPAGNLSASFGDRVLAVGDFAGQLKPTTGG 272
Query: 340 GIYFAAKSGRMCAEAIIEGSEN--GTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVF- 396
GIYF G +CA+ + + T + + D+ +Y + W + +L +++
Sbjct: 273 GIYF----GLLCADLAVACLDKKIKTNKLSKADMAEYEKSWKALIGSELYIGKLLSRIYA 328
Query: 397 -YRSNPAREAFVEMCADEYVQKMTFDSYL 424
+ F + A+ ++KM S+L
Sbjct: 329 GLDDRLLEQIFKKCAANGMIEKMAAKSHL 357
>gi|331657677|ref|ZP_08358639.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli TA206]
gi|419913910|ref|ZP_14432319.1| hypothetical protein ECKD1_12154 [Escherichia coli KD1]
gi|422368527|ref|ZP_16448939.1| FAD dependent oxidoreductase [Escherichia coli MS 16-3]
gi|315299732|gb|EFU58972.1| FAD dependent oxidoreductase [Escherichia coli MS 16-3]
gi|331055925|gb|EGI27934.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli TA206]
gi|388387938|gb|EIL49536.1| hypothetical protein ECKD1_12154 [Escherichia coli KD1]
Length = 429
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 133/318 (41%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
I+RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPIERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN----AGDYDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S+ + + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVSASNPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
+ +V G V DI Q + +D I GGK++ AH +PE
Sbjct: 229 NKDSVSLGLVCGLSDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVMIVGDAAGF 306
>gi|334336111|ref|YP_004541263.1| geranylgeranyl reductase [Isoptericola variabilis 225]
gi|334106479|gb|AEG43369.1| geranylgeranyl reductase [Isoptericola variabilis 225]
Length = 437
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 145/358 (40%), Gaps = 36/358 (10%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEF-----DLPLD 106
V V+G GPAG A A A G++ L+E+ K CG + V E D D
Sbjct: 11 VIVVGAGPAGSATAHWCASAGLDVLLLEKASFPRDKVCGDGLTPRAVAELARMGVDTRED 70
Query: 107 IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNGASVINGLF 165
+ +++++ L + GM R R LD L + A+ +GA ++
Sbjct: 71 DGWIRNEGLRVVAGGRSWELAWPDLASYPSYGMARSRATLDHLLAQHAQASGAKLLE--R 128
Query: 166 MKMDLPRNFEQP-YVLYYTE--YDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDY 222
K+ P E+ V T DG GE RT V+ ADG +SR A ++
Sbjct: 129 TKVTGPLLDERSGRVAGVTAQLLDGRGRADGETRTYRAPVVVAADGVSSRFATALGLTRR 188
Query: 223 D------YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDF---YGWVFPKCDHVA-VG 272
D + P + + E+ E++ G + YGW+F D A VG
Sbjct: 189 DDRPIGTAVRTYYRTAGTPRHEDAFMESHLELWDGAPGASTLLPGYGWIFALGDGTANVG 248
Query: 273 TGTVTH-------KGDIKKFQLATRNRAKDKILGGK------IIRVEAHPIPEHPRPRRL 319
G+V+ G + + R+ G +R A P+ + P
Sbjct: 249 LGSVSSTPARQSASGHDYRALMDAWVRSTPAEWGFTPENQVGPVRGAALPMGFNRTPLYR 308
Query: 320 SGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEK 377
G V LVGDAAG V+ +GEGI +A ++GR+ A+AI + T E L Y ++
Sbjct: 309 DGAV-LVGDAAGMVSPFNGEGIAYALQAGRVAADAITQARTRTTDDARERTLATYADR 365
>gi|330508949|ref|YP_004385377.1| geranylgeranyl reductase [Methanosaeta concilii GP6]
gi|328929757|gb|AEB69559.1| geranylgeranyl reductase [Methanosaeta concilii GP6]
Length = 391
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 147/339 (43%), Gaps = 31/339 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-----NCKPCGGAIPLCMVGEFDLPLDI 107
V V+G GP G AA+T A G+ ++E++ + C G LC + + + +
Sbjct: 5 VIVVGAGPGGSMAAKTAAAAGLNVVMLEKRQEIGDPVRCAEGVGKRALCKMVKPE--PEW 62
Query: 108 IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK 167
I +V K+ SP ++ + + E ++ R+V D L +A + GA V+
Sbjct: 63 IASEVKGAKIYSPDGSSIVMSEDRSGSEVGYVLERKVFDRALAMQAARAGARVLVKT-RA 121
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK------SINAGD 221
L N PY + + VG+ +E +IGADG S+V + ++N D
Sbjct: 122 ASLLMNDGVPYGVNAIQ-------VGDPLKIEAPIIIGADGVESKVGRWAGIDTTLNLKD 174
Query: 222 YDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKG 280
+ F + D + ++ + Y+G+ ++P Y W FPK + +A VG G + +
Sbjct: 175 IESCAQFL----VLDPGI--DDDYTKFYLGNSIAPSGYAWSFPKGEKLANVGLGVLGSRS 228
Query: 281 DIKKFQLATRNRAKDKILGGKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAGYVTKCSGE 339
+ R K GKI+ + P P + V LVGDAA +G
Sbjct: 229 RPGEAIRLLREFTKKHFPNGKIVEMVVGGDPCSGPIQSATAHGVMLVGDAARQTDPLTGG 288
Query: 340 GIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKW 378
GI A ++G + E + G + EG LR+Y E+W
Sbjct: 289 GILNAMEAGVIAGEVAAKAIAAGN-VAREG-LREYEERW 325
>gi|212224840|ref|YP_002308076.1| geranylgeranyl hydrogenase [Thermococcus onnurineus NA1]
gi|212009797|gb|ACJ17179.1| geranylgeranyl hydrogenase [Thermococcus onnurineus NA1]
Length = 370
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 136/314 (43%), Gaps = 54/314 (17%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPLCMVGEFDLPLDIIDRK 111
V +IGGGP G A LA++ + ++E+K K C G I LP + I K
Sbjct: 5 VLIIGGGPVGNYLANLLARD-FKVAVVEKKGSFGGKACTGIIGAENFERLGLPEEAILNK 63
Query: 112 VTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLP 171
+ S + +I + P Y +V R++L+ L ERA + GA
Sbjct: 64 LRGAVFYSRIQ-SFEI-ERKSPQAY--LVDRKILEKSLAERAVRRGAD------------ 107
Query: 172 RNFEQPYVLYY--TEYDGTKGG------VGEKRTLEVDAVIGADGANSRVAKSINAGDYD 223
YY T + G K G GE+ +E +GADG +S VAK+I A
Sbjct: 108 ---------YYMSTTFLGFKNGRAVLQRFGERFEIEAGFYVGADGVSSTVAKAIRAQTKA 158
Query: 224 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGT-GTVTHKGD 281
++ E V++ E + + E++V D++ +F+ WV P + +A VGT G +
Sbjct: 159 EFLSGYE-VEVVGE---FKPDFVEVWVNKDINEEFFFWVAPVNESLARVGTFGGLEALYK 214
Query: 282 IKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGI 341
K ++ N ++ +A + R + G VAL+GDAA + + GI
Sbjct: 215 FLKIRMLKPN---------AVVEFKAGSVGFGVRKPWIRGNVALIGDAALQIKPTTAGGI 265
Query: 342 YFAAKSGRMCAEAI 355
F G +CA A+
Sbjct: 266 VF----GMICAHAL 275
>gi|304314069|ref|YP_003849216.1| dehydrogenase [Methanothermobacter marburgensis str. Marburg]
gi|302587528|gb|ADL57903.1| predicted dehydrogenase [Methanothermobacter marburgensis str.
Marburg]
Length = 385
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 141/349 (40%), Gaps = 55/349 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDL-PL-DII 108
+ V+GG AG AA AKNG+ ++E + P C G + + PL +
Sbjct: 5 LVVVGGRVAGSIAAYHAAKNGLHVLMLEGNPEIGTPVQCAGGVSDSFFKSTGIKPLPEFT 64
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
++ + P ++ T P ++ R++ D YL RA + GA V+ G +
Sbjct: 65 CTRINSATINGPYGASI---TTRNPIIKGYIIERKIFDKYLALRATEAGADVLAGSRVN- 120
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGV---GEKRTLEVDA--VIGADGANSRVAK------SI 217
DL +DG+ GV G T EV++ VI ADG S + +
Sbjct: 121 DL------------IFHDGSVSGVKFRGPDGTHEVESSIVIAADGIQSGIGRMAGLDTRF 168
Query: 218 NAGDYDYAIAFQ-ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTG- 274
G+ ++ + DE M E Y G +P Y WVFPK D A VG G
Sbjct: 169 RPGELCSCAQYEVAGFDVDDETM-------EFYFGSTFAPSGYLWVFPKGDGRANVGVGI 221
Query: 275 ---TVTHKGDIKKF-QLATRNRAKDKILGGKIIRVEAHPIP-EHPRPRRLSGRVALVGDA 329
T + + Q +R G + A +P P + + + +VGDA
Sbjct: 222 RRTTCSDNSPLHYLNQFISRA-------GCSRLEFNAGAVPIAGPIRKTYTDSLLVVGDA 274
Query: 330 AGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKW 378
AG V +G GI+ AAK + A+ E E ++ D G L KY W
Sbjct: 275 AGQVDPLTGGGIHVAAKCAMIAADVATEAVE--SQRTDSGFLSKYESTW 321
>gi|14590266|ref|NP_142332.1| hypothetical protein PH0356 [Pyrococcus horikoshii OT3]
gi|3256747|dbj|BAA29430.1| 370aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 370
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 131/313 (41%), Gaps = 46/313 (14%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLDIIDRK 111
V +IGGGP G A LA V +IE+K K C G + LP I
Sbjct: 5 VLIIGGGPVGNYLASLLAGK-VNVGVIEKKGAFGGKACTGIVGAENYESLGLPEKAILNA 63
Query: 112 VTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLP 171
IS V +I ++L P Y ++ R+VL+ L +RA + GA
Sbjct: 64 FNGAFFISREKV-FEIHRSL-PQAY--LIDRKVLERELAKRAMRKGAE------------ 107
Query: 172 RNFEQPYVLYY--TEYDGTKGG------VGEKRTLEVDAVIGADGANSRVAKSINAGDYD 223
YY T + G K G + + +E +GADG NS VAK I A
Sbjct: 108 ---------YYLSTNFLGFKNGKAILQHLDSRLEIEAKYYVGADGVNSSVAKEIQARTEG 158
Query: 224 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIK 283
+ E + + + + E++V +++P+F+ WV P + A GT +
Sbjct: 159 EVLKGWEIEVLGN----FKRDHVEVWVNKNINPEFFFWVAPINEEEA-RVGTFGEIDSLA 213
Query: 284 KFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYF 343
KF L R ++ K + +++ + R + G VALVGDAA + + GI F
Sbjct: 214 KF-LKIR-----RLNPFKTVEIKSGAVILGWRKPWVKGNVALVGDAALQIKPTTAGGIVF 267
Query: 344 AAKSGRMCAEAII 356
A + A+AI+
Sbjct: 268 GAYCAKSLAKAIL 280
>gi|418941430|ref|ZP_13494758.1| oxidoreductase [Escherichia coli O157:H43 str. T22]
gi|375323235|gb|EHS68952.1| oxidoreductase [Escherichia coli O157:H43 str. T22]
Length = 429
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 134/310 (43%), Gaps = 45/310 (14%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP----LDIID 109
V+G G AG AA +A+ G++ +IER CK G E +P ++
Sbjct: 10 VVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVE 69
Query: 110 RKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
RKVT+ K + S V +D Q P V R LD +L E+AE+ GA I G+
Sbjct: 70 RKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGV 129
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN---AGD 221
++D V + G + G L+ + V+ ADG NS + +S+ A D
Sbjct: 130 --RVD-------ALVREGNKVTGVQAG---DDILQANVVVLADGVNSMLGRSLGMVPASD 177
Query: 222 -YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTG 274
+ YA+ +E + + E+ + E A ++ G S G F + ++ G
Sbjct: 178 PHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLYTNKDSISLG 236
Query: 275 TVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR---PRRLSGR 322
V GDI Q + +D I GGK++ AH +PE P+ ++
Sbjct: 237 LVCGLGDIAHVQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNDG 296
Query: 323 VALVGDAAGY 332
V +VGDAAG+
Sbjct: 297 VMIVGDAAGF 306
>gi|373494490|ref|ZP_09585093.1| hypothetical protein HMPREF0380_00731 [Eubacterium infirmum F0142]
gi|371968420|gb|EHO85879.1| hypothetical protein HMPREF0380_00731 [Eubacterium infirmum F0142]
Length = 359
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 138/339 (40%), Gaps = 72/339 (21%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIE-RKLDNCKPCGG-----AIPLCMVGEFDLPLD 106
+A++G GPAG A +A NG LI+ + L KPCGG A L F LP D
Sbjct: 14 IAIVGAGPAGATFAREVAGNGYSVLLIDGQDLIGNKPCGGLLAPDAQKLMAHRYFVLPKD 73
Query: 107 I-IDRKVTKMKMISPSNVAVDIGQTL---KPHEYIGMVRREVLDAYLRERAEKNGASVIN 162
I +D ++ +K I D+G L Y+ M RR D +L N + IN
Sbjct: 74 ILVDPQIFSVKTI-------DLGSGLICNYQRYYLNMDRR-AFDKFLLTLIP-NEVTRIN 124
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDY 222
+K + N + L ++ D + +E ++GADGA+S + +S
Sbjct: 125 AKLVKAERSGN---GFKLSVSDSDKAR------HEIECRFLVGADGASSIIRRSFF---- 171
Query: 223 DYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPK-----CDHVAVGTGTVT 277
D K+ Y + + + G+ FY +F K C G V
Sbjct: 172 -------------DRKIYKYTAIQQWFKGNGKESPFYSCIFDKKTSSGCSWTIHKDGYVI 218
Query: 278 HKGDIKKFQLATRNRAKD-------KILG---GKIIRVEAHPIPEHPRPRRLS------G 321
G F+L +A + K +G G+ ++ EA + P+ LS
Sbjct: 219 FGGS---FELHNCRKAFEEQKIRFEKFMGISLGEPLKTEACLVCC---PKHLSDFITGDS 272
Query: 322 RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
V L+G+AAG+++ S EG A SG M A A I E
Sbjct: 273 NVFLIGEAAGFISASSLEGFSSAFTSGTMLARAFIRSDE 311
>gi|449019341|dbj|BAM82743.1| similar to geranylgeranyl hydrogenase [Cyanidioschyzon merolae
strain 10D]
Length = 515
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 169/407 (41%), Gaps = 76/407 (18%)
Query: 41 KTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVG 99
K+ P L V ++G GPAG A A+ G+ L+E+K K CG A+ C +
Sbjct: 64 KSYPPLPKDAYDVCIVGAGPAGSVTAYFCARAGLRVLLLEKKKFPRQKICGDAV--CTLA 121
Query: 100 EFDLP-----------LDIIDRK-----VTKMKMISPSNVAVDIGQTLK-------PHEY 136
+ + LD I R+ + ++SP+ + IG ++
Sbjct: 122 QDIMERMESATGKGSVLDEILREGKGHPASNGGLVSPAGYSY-IGNSVGEGDSGKLARSA 180
Query: 137 IGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKR 196
+ ++R VLD L A GA+++ + ++ F+ L+ + T G E+
Sbjct: 181 VIAIKRIVLDEKLARSAAYAGANLLEEVSVE---SARFDTGKALWSISGERT-GSAPEEA 236
Query: 197 TLEVDAVIGADGANSRVAKS----------------INAGDYDYAIAFQERVKIPDEKMV 240
+ + ++ ADGA SR+A + AG ++YA D ++
Sbjct: 237 SYQARVLVCADGAPSRLAMQLGIVKEAPQGTCSRAYVKAGSHNYA---------ADGTVI 287
Query: 241 YYENLAEMY------VGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKK-FQL--ATRN 291
Y NL Y V D++ ++ ++ P V + H G +K+ F L A
Sbjct: 288 YNLNLLPGYMAIFREVNDEL--NYCCYIIPGNPRVRNDDLSRLHHGFVKEDFYLSRALGP 345
Query: 292 RAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMC 351
RA+ + + +R+ PR + + +VGDAAG++ +GEGI+ A SG M
Sbjct: 346 RAELEPMKAGSLRLGG-------VPRSYADNLLIVGDAAGFIDPLTGEGIHHAMDSGVMA 398
Query: 352 AEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398
AE + E ++ + L Y +W + + +K L ++ YR
Sbjct: 399 AEVLKEAFKHSD--LSARFLSNYQRRWMRAFGYDFKASMRLAQILYR 443
>gi|147678101|ref|YP_001212316.1| dehydrogenases [Pelotomaculum thermopropionicum SI]
gi|146274198|dbj|BAF59947.1| dehydrogenases [Pelotomaculum thermopropionicum SI]
Length = 432
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 165/386 (42%), Gaps = 64/386 (16%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-------KLDNCKPCGGAIPLCMVGEF-DLPLD 106
V+G GPAG AA +AK G+E LIE+ + + A+ + G + + P++
Sbjct: 9 VVGAGPAGSTAAYLMAKAGLEVLLIEKGAAPGSKNMFGGRMYSHALNQVIPGFWAEAPVE 68
Query: 107 --IIDRKVTKMKMISPSNVAV-DIGQTLKPHEY--IGMVRREVLDAYLRERAEKNGASVI 161
+ +T M ++++ D+ T P+ Y ++R E DA+L +AE+ GA +
Sbjct: 69 RPVAKEIITLMTGDQCLSISIQDLSWTKPPYHYHSFTLLRAE-FDAWLAAKAEEAGAMLA 127
Query: 162 NGLFMKMDLPRNFEQPYVLYYTEYDGTKGGV--GEKRTLEVDAVIGADGANSRVAKSINA 219
G+ + L + DG G+ GE L D VI ADG NS +A+
Sbjct: 128 CGIRVDDLLIK-------------DGRIVGIRAGEDEML-ADVVIAADGVNSLMAQKAGL 173
Query: 220 GDY----DYAIAFQERVKIPDEKMVYYENL------AEMYVGDDVSPDFYGWVFPKCDHV 269
A ++ +K+ E++ L A+++VG+ + G F +
Sbjct: 174 ARMFSPGQVATGVKQVIKLSPEEISRRFQLEGNNGAAQLFVGE-CTKGMQGGGFIYTNKD 232
Query: 270 AVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHP---RPR 317
+ G V +++K Q + ++ + GG+++ AH +PE PR
Sbjct: 233 TISLGLVIKAAELQKTQHKIADLVEEFKHNPHIRPLVEGGEVVEYSAHLVPEAGLDMMPR 292
Query: 318 RLSGRVALVGDAAGYVTKCS--GEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYL 375
+ + GDAAG+V G+ FA SG+ A+ +IE + N R+ L
Sbjct: 293 LYGDGILVAGDAAGFVLNLGYIVRGMDFAIASGQAAAQTVIEAARNNNFS------RQSL 346
Query: 376 EKWDKTYWPTYKVLDVLQKVFYRSNP 401
++ K ++ + D+ FYR P
Sbjct: 347 SQYAKLLKESFVLRDL---EFYRKAP 369
>gi|395644569|ref|ZP_10432429.1| Digeranylgeranylglycerophospholipid reductase [Methanofollis
liminatans DSM 4140]
gi|395441309|gb|EJG06066.1| Digeranylgeranylglycerophospholipid reductase [Methanofollis
liminatans DSM 4140]
Length = 407
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 137/324 (42%), Gaps = 32/324 (9%)
Query: 68 TLAKNGVETFLIERKLDNCKPCGGAIPLCM--VGEFDLP-LDIIDRKVTKMKMISPSNVA 124
T A+ G+ T LIE++ P A +C + EF P I ++++ ++SP
Sbjct: 22 TAAEQGLRTCLIEKRPAIGTPVRCAEGICKHELSEFIEPDYKWISAEISQAGIVSPDQTM 81
Query: 125 VDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTE 184
+ + ++ + ++ R++ D L +A GA + F+K V+
Sbjct: 82 MVLDSSIAGSKVGYVLERKIFDRALVNQAAAAGADI----FVKTSAKAPIITDGVIRGAR 137
Query: 185 YDGTKGGVGEKRTLEVDAVIGADGANSRVAK------SINAGD-YDYAIAFQERVKIPDE 237
D GGV ++ D VI ADG S+ A+ S+ GD A + I
Sbjct: 138 ID---GGVSH---IQADVVIAADGVESQFARRCGIDTSVKPGDMMSCAQYLLSNIDINPA 191
Query: 238 KMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHK-GDIKKFQLATRNRAKD 295
V+ + G+ ++P Y W+FPK + A VG G K G+ + + K+
Sbjct: 192 MNVF-------HFGNTIAPGGYIWIFPKGERSANVGVGIAGSKSGEHHRAKDYLDAFVKE 244
Query: 296 KILGGKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEA 354
K GK + + A IP P +S + +VGDAA +G GIY + +GR+ E
Sbjct: 245 KFPDGKTLELIAGGIPVSRPLATTVSDGLMIVGDAARVADPLTGGGIYNSMFTGRLAGET 304
Query: 355 IIEGSENGTRMIDEGDLRKYLEKW 378
+E G + L Y +KW
Sbjct: 305 AVECIAKGD--CSKNALSSYDKKW 326
>gi|309793467|ref|ZP_07687894.1| FAD dependent oxidoreductase [Escherichia coli MS 145-7]
gi|308123054|gb|EFO60316.1| FAD dependent oxidoreductase [Escherichia coli MS 145-7]
Length = 429
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 133/310 (42%), Gaps = 45/310 (14%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP----LDIID 109
V+G G AG AA +A+ G++ +IER CK G E +P ++
Sbjct: 10 VVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVE 69
Query: 110 RKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
RKVT+ K + S V +D Q P V R LD +L E+AE+ GA I G+
Sbjct: 70 RKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGV 129
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN---AGD 221
++D V + G + G LE + VI ADG NS + +S+ A D
Sbjct: 130 --RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGRSLGMVPASD 177
Query: 222 -YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTG 274
+ YA+ +E + + E+ + E A ++ G S G F + ++ G
Sbjct: 178 PHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLYTNKDSISLG 236
Query: 275 TVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR---PRRLSGR 322
V GDI Q + +D I GGK++ H +PE P+ ++
Sbjct: 237 LVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSGHMVPEGGLAMVPQMVNDG 296
Query: 323 VALVGDAAGY 332
V +VGDAAG+
Sbjct: 297 VMIVGDAAGF 306
>gi|432369819|ref|ZP_19612908.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE10]
gi|430885446|gb|ELC08317.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE10]
Length = 429
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 137/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ ++G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIMVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNEGVMIVGDAAGF 306
>gi|157154713|ref|YP_001462994.1| hypothetical protein EcE24377A_1916 [Escherichia coli E24377A]
gi|157076743|gb|ABV16451.1| protein fixC homolog [Escherichia coli E24377A]
Length = 429
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 137/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G L+ + V+ ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILQANVVVLADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQMVNDGVMIVGDAAGF 306
>gi|191167840|ref|ZP_03029645.1| protein FixC homolog [Escherichia coli B7A]
gi|193065290|ref|ZP_03046362.1| protein FixC homolog [Escherichia coli E22]
gi|194429498|ref|ZP_03062020.1| protein FixC homolog [Escherichia coli B171]
gi|260844004|ref|YP_003221782.1| oxidoreductase [Escherichia coli O103:H2 str. 12009]
gi|307310730|ref|ZP_07590376.1| Electron-transferring-flavoprotein dehydrogenase [Escherichia coli
W]
gi|378712863|ref|YP_005277756.1| electron-transferring-flavoprotein dehydrogenase [Escherichia coli
KO11FL]
gi|386609087|ref|YP_006124573.1| FAD/NAD(P)-binding oxidoreductase [Escherichia coli W]
gi|386701336|ref|YP_006165173.1| oxidoreductase [Escherichia coli KO11FL]
gi|386709555|ref|YP_006173276.1| oxidoreductase [Escherichia coli W]
gi|415794898|ref|ZP_11496645.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli E128010]
gi|417168062|ref|ZP_12000684.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 99.0741]
gi|417172692|ref|ZP_12002725.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 3.2608]
gi|417184873|ref|ZP_12010407.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 93.0624]
gi|417252101|ref|ZP_12043864.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 4.0967]
gi|417623387|ref|ZP_12273694.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli STEC_H.1.8]
gi|419289593|ref|ZP_13831688.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC11A]
gi|419294883|ref|ZP_13836929.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC11B]
gi|419300244|ref|ZP_13842246.1| FAD binding domain protein [Escherichia coli DEC11C]
gi|419306341|ref|ZP_13848245.1| FAD binding domain protein [Escherichia coli DEC11D]
gi|419311364|ref|ZP_13853232.1| FAD binding domain protein [Escherichia coli DEC11E]
gi|419316690|ref|ZP_13858505.1| FAD binding domain protein [Escherichia coli DEC12A]
gi|419322792|ref|ZP_13864505.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC12B]
gi|419328834|ref|ZP_13870451.1| FAD binding domain protein [Escherichia coli DEC12C]
gi|419334392|ref|ZP_13875936.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC12D]
gi|419339958|ref|ZP_13881435.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC12E]
gi|419869338|ref|ZP_14391542.1| oxidoreductase [Escherichia coli O103:H2 str. CVM9450]
gi|419930393|ref|ZP_14447997.1| hypothetical protein EC5411_18950 [Escherichia coli 541-1]
gi|419949978|ref|ZP_14466204.1| hypothetical protein ECMT8_11477 [Escherichia coli CUMT8]
gi|420391378|ref|ZP_14890635.1| flavoprotein (electron transport), possibly involved in anaerobic
carnitine metabolism [Escherichia coli EPEC C342-62]
gi|432967821|ref|ZP_20156736.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE203]
gi|190902099|gb|EDV61843.1| protein FixC homolog [Escherichia coli B7A]
gi|192927084|gb|EDV81706.1| protein FixC homolog [Escherichia coli E22]
gi|194412462|gb|EDX28762.1| protein FixC homolog [Escherichia coli B171]
gi|257759151|dbj|BAI30648.1| predicted oxidoreductase [Escherichia coli O103:H2 str. 12009]
gi|306908908|gb|EFN39404.1| Electron-transferring-flavoprotein dehydrogenase [Escherichia coli
W]
gi|315061004|gb|ADT75331.1| predicted oxidoreductase with FAD/NAD(P)-binding domain
[Escherichia coli W]
gi|323163451|gb|EFZ49277.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli E128010]
gi|323378424|gb|ADX50692.1| Electron-transferring-flavoprotein dehydrogenase [Escherichia coli
KO11FL]
gi|345380028|gb|EGX11934.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli STEC_H.1.8]
gi|378131524|gb|EHW92881.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC11A]
gi|378141970|gb|EHX03172.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC11B]
gi|378149776|gb|EHX10896.1| FAD binding domain protein [Escherichia coli DEC11D]
gi|378152214|gb|EHX13315.1| FAD binding domain protein [Escherichia coli DEC11C]
gi|378159021|gb|EHX20035.1| FAD binding domain protein [Escherichia coli DEC11E]
gi|378169448|gb|EHX30346.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC12B]
gi|378171942|gb|EHX32804.1| FAD binding domain protein [Escherichia coli DEC12A]
gi|378172591|gb|EHX33442.1| FAD binding domain protein [Escherichia coli DEC12C]
gi|378186605|gb|EHX47228.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC12D]
gi|378191424|gb|EHX52000.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC12E]
gi|383392863|gb|AFH17821.1| oxidoreductase [Escherichia coli KO11FL]
gi|383405247|gb|AFH11490.1| oxidoreductase [Escherichia coli W]
gi|386171088|gb|EIH43136.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 99.0741]
gi|386180390|gb|EIH57864.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 3.2608]
gi|386183342|gb|EIH66091.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 93.0624]
gi|386217676|gb|EII34161.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 4.0967]
gi|388342543|gb|EIL08577.1| oxidoreductase [Escherichia coli O103:H2 str. CVM9450]
gi|388400247|gb|EIL60999.1| hypothetical protein EC5411_18950 [Escherichia coli 541-1]
gi|388417947|gb|EIL77770.1| hypothetical protein ECMT8_11477 [Escherichia coli CUMT8]
gi|391313143|gb|EIQ70736.1| flavoprotein (electron transport), possibly involved in anaerobic
carnitine metabolism [Escherichia coli EPEC C342-62]
gi|431470938|gb|ELH50831.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE203]
Length = 429
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 133/310 (42%), Gaps = 45/310 (14%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP----LDIID 109
V+G G AG AA +A+ G++ +IER CK G E +P ++
Sbjct: 10 VVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVE 69
Query: 110 RKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
RKVT+ K + S V +D Q P V R LD +L E+AE+ GA I G+
Sbjct: 70 RKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGV 129
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN---AGD 221
++D V + G + G LE + VI ADG NS + +S+ A D
Sbjct: 130 --RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGRSLGMVPASD 177
Query: 222 -YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTG 274
+ YA+ +E + + E+ + E A ++ G S G F + ++ G
Sbjct: 178 PHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLYTNKDSISLG 236
Query: 275 TVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR---PRRLSGR 322
V GDI Q + +D I GGK++ H +PE P+ ++
Sbjct: 237 LVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSGHMVPEGGLAMVPQMVNDG 296
Query: 323 VALVGDAAGY 332
V +VGDAAG+
Sbjct: 297 VMIVGDAAGF 306
>gi|357634780|ref|ZP_09132658.1| geranylgeranyl reductase [Desulfovibrio sp. FW1012B]
gi|357583334|gb|EHJ48667.1| geranylgeranyl reductase [Desulfovibrio sp. FW1012B]
Length = 390
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 126/337 (37%), Gaps = 70/337 (20%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLDIIDR--- 110
++G GPAG AA LA+ G L+++ K C G + V D+++R
Sbjct: 9 IVGAGPAGSTAACVLARKGANVLLLDKAPFPRDKLCAGLLTWKSV-------DVLERVYG 61
Query: 111 -------KVTKMKMISPSNVAVDIGQTLKPHEY---IGMVRREVLDAYLRERAEKNGASV 160
SP G+TL E +R V D +L ++A K GA V
Sbjct: 62 DSAEGLLASGVFNAASPGYRIRFRGRTLAAGELFYPFHFTKRRVFDKHLLDQAVKAGADV 121
Query: 161 INGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANS--RVAKSIN 218
G P + P DG R VIGADG S R A +
Sbjct: 122 RAG------CPVSAVDPATGLVRLADG--------RKFTGRHVIGADGVASVVRRACPFS 167
Query: 219 AGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDD--VSPDF----YGWVFPKCDHVAVG 272
+ + + +P + E + D V F YGWVFP D +A+G
Sbjct: 168 SASWREGMGGGMEFYLPRSDARLSGAVHEDLLADSPTVYAGFLRAGYGWVFPHRDVLAIG 227
Query: 273 TG--TVTHKGDI-KKF-----------QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRR 318
G +V H + KKF +LA R G + R P H
Sbjct: 228 IGGHSVRHGKEFRKKFREFLAFLGLPPELADTARGHGLPYGNYLTR------PWH----- 276
Query: 319 LSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
GR L GDAAG V GEGIY+A +SG + EA+
Sbjct: 277 --GRTLLAGDAAGLVETLFGEGIYYALRSGELAGEAV 311
>gi|432441115|ref|ZP_19683456.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE189]
gi|432446237|ref|ZP_19688536.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE191]
gi|433013840|ref|ZP_20202202.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE104]
gi|433023472|ref|ZP_20211473.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE106]
gi|433324127|ref|ZP_20401445.1| oxidoreductase [Escherichia coli J96]
gi|430966956|gb|ELC84318.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE189]
gi|430972510|gb|ELC89478.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE191]
gi|431531826|gb|ELI08481.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE104]
gi|431537123|gb|ELI13271.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE106]
gi|432347386|gb|ELL41846.1| oxidoreductase [Escherichia coli J96]
Length = 429
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 133/318 (41%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 LDI----IDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 SFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN----AGDYDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S+ + + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVSASNPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
+ +V G V DI Q + +D I GGK++ AH +PE
Sbjct: 229 NKDSVSLGLVCGLSDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVMIVGDAAGF 306
>gi|423704835|ref|ZP_17679258.1| hypothetical protein ESSG_04233 [Escherichia coli H730]
gi|385705478|gb|EIG42543.1| hypothetical protein ESSG_04233 [Escherichia coli H730]
Length = 429
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 137/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG N+ + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNAMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNEGVMIVGDAAGF 306
>gi|425300472|ref|ZP_18690416.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli 07798]
gi|408216619|gb|EKI40933.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli 07798]
Length = 429
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 134/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S+ A D + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
+ +V G V DI Q + +D I GGK++ AH +PE
Sbjct: 229 NKDSVSLGLVCGLSDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVMIVGDAAGF 306
>gi|385204874|ref|ZP_10031744.1| flavin-dependent dehydrogenase [Burkholderia sp. Ch1-1]
gi|385184765|gb|EIF34039.1| flavin-dependent dehydrogenase [Burkholderia sp. Ch1-1]
Length = 436
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 164/392 (41%), Gaps = 73/392 (18%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLC-----MVGEF--DLPLD 106
V+G GP+G AAA T+AK G++ IER + K GAI ++ +F D PL+
Sbjct: 11 VVGAGPSGNAAAYTMAKAGLKVLQIERGEYPGSKNVQGAILYAKALEEIIPDFRDDAPLE 70
Query: 107 --IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
II++++ + S + + KP + R D + + + GA +I
Sbjct: 71 RHIIEQRIWMLDDTSFVGTHMRSEEYNKPPYNRYTIIRAQFDKWFSSKVREAGALLICET 130
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK------SIN 218
+K +L + +Q + + D G V D V+ ADG NS +A+ I
Sbjct: 131 TVK-ELIMDGDQ---VVGVQCDREHGDV------YADVVVLADGVNSTLARKAGFHGEIE 180
Query: 219 AGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFY----------GWVFPKCDH 268
AG + A+A +E + +P+E + N+ E D V + G+++ +
Sbjct: 181 AG--NVALAVKEILFMPEETIRQRFNIGE---DDGVVIEMVGRITDGMTGTGFLYTNKES 235
Query: 269 VAVGTGTVTHKGDIKKFQLATRNRAKDKIL---------------GGKIIRVEAHPIPE- 312
+ +G G + GD KK NR +L GG++ AH IPE
Sbjct: 236 LTIGVGCML--GDFKK----NPNRTSPYVLLEKMKQHPSIAPLIAGGEMKEYCAHLIPEG 289
Query: 313 --HPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGD 370
H PR +VGD+ G+V EG A +GR+ AE +I G
Sbjct: 290 GFHAIPRVYGNGWMIVGDSGGFVNAAHREGSNLAMTTGRLAAETVIHAKAAGLGY-RAAT 348
Query: 371 LRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPA 402
L+ Y D+++ V+ L K YR PA
Sbjct: 349 LKAYKTALDQSF-----VMKDLHK--YRDMPA 373
>gi|302532900|ref|ZP_07285242.1| hydrogenase [Streptomyces sp. C]
gi|302441795|gb|EFL13611.1| hydrogenase [Streptomyces sp. C]
Length = 396
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 105/250 (42%), Gaps = 60/250 (24%)
Query: 137 IGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKR 196
G++ R DA L AEK GA++ G + E G V ++R
Sbjct: 87 FGLINRPEFDAALVAEAEKAGATLRTG--------------TAVSRVEQHGA--AVPDRR 130
Query: 197 TLEV----------DAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLA 246
T+ V AV+GADG+ SR+ + + + + +P E +A
Sbjct: 131 TVAVVLADGGTVLARAVVGADGSASRIGAHVGVEMDQVDLGLEAEIPVP-------ETVA 183
Query: 247 EMYVGDDVS-----PDFYGWVFPKCDHVAVGTGTVTHKGD-----------IKKFQLATR 290
E + G + P YGWVFPK D + VG ++ KG+ I + LA
Sbjct: 184 EDWKGRILIDWGPLPGSYGWVFPKGDTLTVGV--ISAKGEGAATKRYLDDFIARLGLAGF 241
Query: 291 NRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRM 350
A + G + R P+ P R GRV + GDAAG + + EGI FA +SGR+
Sbjct: 242 EPA---LSSGHLTRCRK---PDSPLSR---GRVLVAGDAAGLLEPWTREGISFALRSGRL 292
Query: 351 CAEAIIEGSE 360
E ++ SE
Sbjct: 293 AGEWAVKVSE 302
>gi|417232103|ref|ZP_12033501.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 5.0959]
gi|386205102|gb|EII09613.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 5.0959]
Length = 429
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 136/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEHAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G L+ + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILQANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNDGVMIVGDAAGF 306
>gi|419278015|ref|ZP_13820273.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC10E]
gi|419375564|ref|ZP_13916594.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC14B]
gi|419380805|ref|ZP_13921766.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC14C]
gi|419386159|ref|ZP_13927041.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC14D]
gi|378130795|gb|EHW92158.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC10E]
gi|378221438|gb|EHX81687.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC14B]
gi|378229681|gb|EHX89817.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC14C]
gi|378232634|gb|EHX92732.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC14D]
Length = 429
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 137/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G L+ + V+ ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILQANVVVLADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNDGVMIVGDAAGF 306
>gi|422781446|ref|ZP_16834231.1| FAD dependent oxidoreductase [Escherichia coli TW10509]
gi|323978164|gb|EGB73250.1| FAD dependent oxidoreductase [Escherichia coli TW10509]
Length = 429
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 138/319 (43%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMELAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G + LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---EDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEKM------VYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E++ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNVMGEEGTAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ +V G V GDI + + +D I GGK++ AH +PE
Sbjct: 228 TNKDSVSLGLVCGLGDIAHAKKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNEGVMIVGDAAGF 306
>gi|227494502|ref|ZP_03924818.1| geranylgeranyl reductase [Actinomyces coleocanis DSM 15436]
gi|226832236|gb|EEH64619.1| geranylgeranyl reductase [Actinomyces coleocanis DSM 15436]
Length = 461
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 177/436 (40%), Gaps = 65/436 (14%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDL-PLDIIDR 110
V V+G GPAG + A LA+ GV+ L+E+ + K CG + V E L +D
Sbjct: 48 VVVVGAGPAGSSTAYYLARAGVDVALLEKSEFPRDKICGDGLTPAAVAEIHLMGVDTTGW 107
Query: 111 KVTK-MKMISPSNVAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNGASVINGLFMKM 168
K + +I + K GM R R LD L RA+ G + G
Sbjct: 108 ARNKGLNVIGGGHSIYLPWPEQKSTPDYGMCRARMDLDESLARRAQSAGVRLYEGY---- 163
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVG---EKRTLEVDA--VIGADGANSRVAKSINAGDYD 223
N +G +G E R ++V A V+ A G +R+A S +
Sbjct: 164 ----NVTGALHSASGRVNGVVVKIGKGKETREIKVHAKVVVEAGGVAARLATSEGVEKHP 219
Query: 224 ---YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDF---YGWVFPKCDHVA-VGTGTV 276
+A + K P + ++ E++ G D YGWVFP D + VG G+V
Sbjct: 220 KRPLGVAARAYFKSPRGNDEWMDSHLELWSGKPGESDLLPGYGWVFPLGDGIVNVGLGSV 279
Query: 277 THKG--------DIKKFQLATRNRAKDKILGGKI--IRVEAHPIPEHPRPRRLSGRVALV 326
+ DI K +A + + +R A P+ + +P +G V +V
Sbjct: 280 SSTAKATTLPYKDIFKTWIANLPEEWEMTEETMLGPLRSAALPMSFNRKPHYANGLV-IV 338
Query: 327 GDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEG---DLRKYLEKWDKTYW 383
GDA G V+ GEGI A ++GR AEA++ R D G +++Y E +
Sbjct: 339 GDAGGMVSPFDGEGIAPAMRAGRYAAEAMVSAL---ARQSDAGFDLAMQRYTEALQADWG 395
Query: 384 PTYKVLDVLQKVFYR--SNPAREAFVEMCAD---------EYVQKMTFDSYLYKRVVPGN 432
Y+ L +VF R NP +++C + V K+ DS+ K G
Sbjct: 396 GYYQ----LGRVFVRLIENP---KIMQICTKYGLPRPRLMKLVHKLLSDSFERK----GG 444
Query: 433 PLEDLKLAVNTIGSLV 448
++D +NT+ +V
Sbjct: 445 DIDD--YLINTLSRMV 458
>gi|300821428|ref|ZP_07101575.1| FAD dependent oxidoreductase [Escherichia coli MS 119-7]
gi|331677572|ref|ZP_08378247.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli H591]
gi|417148625|ref|ZP_11988872.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 1.2264]
gi|418043895|ref|ZP_12682047.1| protein FixC-like protein [Escherichia coli W26]
gi|419391613|ref|ZP_13932428.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC15A]
gi|419396610|ref|ZP_13937386.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC15B]
gi|419402017|ref|ZP_13942742.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC15C]
gi|419407160|ref|ZP_13947851.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC15D]
gi|419412695|ref|ZP_13953351.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC15E]
gi|300525931|gb|EFK47000.1| FAD dependent oxidoreductase [Escherichia coli MS 119-7]
gi|331074032|gb|EGI45352.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli H591]
gi|378238337|gb|EHX98338.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC15A]
gi|378246766|gb|EHY06686.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC15B]
gi|378247876|gb|EHY07791.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC15C]
gi|378255410|gb|EHY15268.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC15D]
gi|378259560|gb|EHY19372.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC15E]
gi|383473312|gb|EID65339.1| protein FixC-like protein [Escherichia coli W26]
gi|386162283|gb|EIH24085.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 1.2264]
Length = 429
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 134/310 (43%), Gaps = 45/310 (14%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP----LDIID 109
V+G G AG AA +A+ G++ +IER CK G E +P ++
Sbjct: 10 VVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVE 69
Query: 110 RKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
RKVT+ K + S V +D Q P V R LD +L E+AE+ GA I G+
Sbjct: 70 RKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGV 129
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN---AGD 221
++D V + G + G L+ + V+ ADG NS + +S+ A D
Sbjct: 130 --RVD-------ALVREGNKVTGVQAG---DDILQANVVVLADGVNSMLGRSLGMVPASD 177
Query: 222 -YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTG 274
+ YA+ +E + + E+ + E A ++ G S G F + ++ G
Sbjct: 178 PHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLYTNKDSISLG 236
Query: 275 TVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR---PRRLSGR 322
V GDI Q + +D I GGK++ AH +PE P+ ++
Sbjct: 237 LVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNDG 296
Query: 323 VALVGDAAGY 332
V +VGDAAG+
Sbjct: 297 VMIVGDAAGF 306
>gi|408534051|emb|CCK32225.1| hydrogenase [Streptomyces davawensis JCM 4913]
Length = 426
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 125/310 (40%), Gaps = 61/310 (19%)
Query: 77 FLIER-KLDNCKPCGGAI--PL--CMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTL 131
L+E+ +L K CGG I P + F+LPL ++ ++ SN
Sbjct: 41 LLLEKAELPRYKTCGGGIIGPSRDSLPPGFELPLR------DRVHAVTFSNNGRFTRTRR 94
Query: 132 KPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK------MDLPRNFEQPYVLYYTEY 185
G++ R D L E A+K GA + G+ ++ +P VL E
Sbjct: 95 SKQMLFGLINRPEFDQQLVEHAQKAGAELRTGVTVQRVEQHGSAVPDRRSVAVVLQGGE- 153
Query: 186 DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENL 245
TL AV+GADG+ SR+ + + + + +P E +
Sbjct: 154 -----------TLLARAVVGADGSASRIGAHVGVKLDQVDLGLEAEIPVP-------ETV 195
Query: 246 AEMYVGDDVS-----PDFYGWVFPKCDHVAVGTGTVTHKGD---------IKKFQLATRN 291
AE + G + P YGWVFPK D + VG + +G I + LA
Sbjct: 196 AEDWQGRVLIDWGPIPGSYGWVFPKGDTLTVGVISARGEGAATKRYLEEFIGRLGLAGFE 255
Query: 292 RAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSGEGIYFAAKSGRM 350
A + G + R A P LS GRV + GDAAG + + EGI FA +SGR+
Sbjct: 256 PA---VSSGHLTRCRADDSP-------LSRGRVLVCGDAAGLLEPWTREGISFALRSGRL 305
Query: 351 CAEAIIEGSE 360
E + +E
Sbjct: 306 AGEWAVRIAE 315
>gi|407803286|ref|ZP_11150122.1| hypothetical protein S7S_02358 [Alcanivorax sp. W11-5]
gi|407022655|gb|EKE34406.1| hypothetical protein S7S_02358 [Alcanivorax sp. W11-5]
Length = 381
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 138/327 (42%), Gaps = 22/327 (6%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPLCMVGEFDLPLD-IIDR 110
V ++G GPAG AAA L + G E ++R KPC G + + ++
Sbjct: 5 VMIVGSGPAGTAAALDLVRAGREVLWLDRPPGARAKPCAGGLTPKAAARLRADVSPVVRE 64
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+ ++M + A D + + + R LDA+ R A GA VI + + +
Sbjct: 65 RPPVIRMSWRGHRASDFCGS---GDVCLLTHRPELDAWHRGLALAAGA-VITPVRRLLRV 120
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
++ + + + DG + T +I ADGA+S V + + G +A
Sbjct: 121 RQDGQGVSLTALDDQDG-------EHTWRARWLIAADGAHSPV-RRLVLGQSAVPVAVAL 172
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATR 290
+ E+ + + + G+ YGW+FPK DH+ VG H G + Q +
Sbjct: 173 EGLLAREECRRWPGM-QFDFGEVAG--GYGWLFPKGDHMNVGL-YGWHPG-VTLSQPSLL 227
Query: 291 NRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
A+ + + ++ +PI H LS GRV GDAAG GEGIY A SG+
Sbjct: 228 AYARRTLGSDALTHIQGYPIATHGDQVPLSAGRVLFAGDAAGLAEPLLGEGIYGALLSGQ 287
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLE 376
A A + E+ R+ + R LE
Sbjct: 288 QAAVAAL--GEDAARVYERLMARWCLE 312
>gi|374988851|ref|YP_004964346.1| putative FAD-dependent oxidoreductase [Streptomyces bingchenggensis
BCW-1]
gi|297159503|gb|ADI09215.1| putative FAD-dependent oxidoreductase [Streptomyces bingchenggensis
BCW-1]
Length = 428
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 165/387 (42%), Gaps = 47/387 (12%)
Query: 47 TNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCG-GAIPLCMVGEFDLP 104
T R V V+G GPAG A LAK G++ L+E+ K CG G P +
Sbjct: 7 TERTADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKELVAMG 66
Query: 105 LDIIDR----KVTKMKMISPS-NVAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNGA 158
+D+ + + +++I + +D + +Y G+VR R+ D L +A+K GA
Sbjct: 67 IDVSEEAGWLRNRGLRIIGGGVRLELDWPELASYPDY-GLVRKRDDFDEQLARQAQKAGA 125
Query: 159 SVINGLFMKMDLPRNFEQPYVLYYT-EYDGTKGGVGEKRT---LEVDAVIGADGANSRVA 214
++ N P + T + G + +G ++T V+ ADG ++R++
Sbjct: 126 --------RLHERCNVGAPIIDDRTGKVIGVEAKLGVEKTPVTFHAPLVVAADGNSTRLS 177
Query: 215 KSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPDFYGWVFPKCD 267
++ D +A + P Y E+ E++ D + P YGW+F D
Sbjct: 178 LAMGLHRREDRPMGVAVRTYFTSPRHDDDYLESWLELWDRRGPQDRLLPG-YGWIFGMGD 236
Query: 268 HVA-VGTGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIRVEAHPIPEHP 314
+ VG G + G K+ +A + + G IR A P+ +
Sbjct: 237 GTSNVGLGVLNTSGSFKELDWREVLKAWCASMPEDWGYTPENMTG--PIRGAALPMAFNR 294
Query: 315 RPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKY 374
+P G + LVGDA G V +GEGI +A +SGR+ A+ I++ T E L++Y
Sbjct: 295 QPHYTRG-LLLVGDAGGMVNPFNGEGIAYAMESGRIAADVIVQAHARATAARRELALQRY 353
Query: 375 LEKWDKTYWPTYKVLDVLQKVFYRSNP 401
+ TY Y + K+ SNP
Sbjct: 354 PKVIKDTYGGYYTLGRAFVKLI--SNP 378
>gi|149922392|ref|ZP_01910826.1| geranylgeranyl reductase [Plesiocystis pacifica SIR-1]
gi|149816754|gb|EDM76244.1| geranylgeranyl reductase [Plesiocystis pacifica SIR-1]
Length = 407
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 141/343 (41%), Gaps = 39/343 (11%)
Query: 77 FLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPS-NVAVDIGQT-LKPH 134
L + + KPC G + + V + + +V M+ N A +G KP
Sbjct: 34 LLDKHEFPRPKPCAGGLTMRTVSALRYSITPVIERVADDWMLGLGMNEATRMGAWPAKPM 93
Query: 135 EYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGE 194
+ M R LDAY E+ K A V F + R + +E +G
Sbjct: 94 PIVAMTVRSRLDAYCLEQT-KAAAGVT---FERNGKVRELARLGSEGGSEGGANEGWSLR 149
Query: 195 KRTLEVDA--VIGADGANSRVAKSIN--AGDY---DYAIAFQERVKIPDEKMVYYENLAE 247
A IGADGAN AK + AG + +A A + V I D+ + + +
Sbjct: 150 TEDAHYTARYFIGADGANGVSAKLLGRAAGHHARDSFAAAVEAEVPI-DDPLRFAMEMRL 208
Query: 248 MYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIK--KFQLATRNRAK-DKILGGKIIR 304
YV P Y W+FPK DH+ VG + +G +K K L RA+ D+ L + I
Sbjct: 209 DYV-----PRGYAWIFPKGDHLNVG---IYARGSVKGLKASLVEFVRARLDQTLETRDIV 260
Query: 305 VEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI--IEGSENG 362
P+ R R G LVGDA G GEGI++A SG+ A+ I +E +
Sbjct: 261 GWRVPVSGQDRAPRTDGAF-LVGDAGGLAEPMFGEGIFYAIASGQAAAQTIAEVEAGRSA 319
Query: 363 TRMIDE-GDLRKYLEKWDKTYWPTY-KVLDVLQKVFYRSNPAR 403
M LR +++ D W ++ ++LD NPAR
Sbjct: 320 AAMASRFARLRAPIDR-DLRAWTSFAEILD--------RNPAR 353
>gi|390959866|ref|YP_006423623.1| geranylgeranyl reductase [Terriglobus roseus DSM 18391]
gi|390414784|gb|AFL90288.1| geranylgeranyl reductase family protein [Terriglobus roseus DSM
18391]
Length = 428
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 142/341 (41%), Gaps = 56/341 (16%)
Query: 69 LAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLDIID------RKVTKMKMISP 120
L GV L+++ KPCGG + ++ F + +D ++++ + SP
Sbjct: 37 LGLAGVRVLLLDKAAAFPREKPCGGGLTARLLDRFPYVREFLDAGEVSVNPLSRIHLESP 96
Query: 121 SNV-AVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYV 179
A + H ++RR DA L RAE + +V G+ ++ R +P
Sbjct: 97 DGTRATYQADSTCLH----LIRRWEFDAALFRRAE-SVCTVRTGVMIR----RCIVKPD- 146
Query: 180 LYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYD----YAIAFQE----- 230
+ E + + G + +IGAD ANS +A+ D YAI E
Sbjct: 147 --HVELESSTGEL-----FTAPMIIGADSANSVIARHTGLRDEAAHKLYAIDMMEETTYD 199
Query: 231 RVKIPDEKMVY-YENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGT--------VTHKGD 281
R+ + D + +Y + L E + YG++FPK +H+ +G + KG
Sbjct: 200 RLDVKDRESIYIFLTLKEAFG--------YGYIFPKTEHLNLGYACKLDWYLTKLRGKGA 251
Query: 282 IKKFQLATRNRAKDKILGGKIIR-VEAHPIP-EHPRPRRLSGRVALVGDAAGYVTKCSGE 339
+ + +AK + G +A PIP P + + RV L GDA G+V + E
Sbjct: 252 EFHGEWVDQLKAKGDVTGETNPEGYKAFPIPISGPLEKTYTDRVLLAGDAGGFVNAFTAE 311
Query: 340 GIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDK 380
GIY+A SG + A+A + ++ D L Y W +
Sbjct: 312 GIYYAMTSGSLAADAALTAIR--SKRYDARSLSGYQVAWQR 350
>gi|296242118|ref|YP_003649605.1| 2,3-di-O-geranylgeranylglyceryl phosphate reductase [Thermosphaera
aggregans DSM 11486]
gi|296094702|gb|ADG90653.1| 2,3-di-O-geranylgeranylglyceryl phosphate reductase [Thermosphaera
aggregans DSM 11486]
Length = 456
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 177/417 (42%), Gaps = 80/417 (19%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC---KPCGGAIPLCMVGEFDL--PLDI 107
V ++G G AG +A LA G + ++E K K CG AI + + L P +
Sbjct: 5 VVIVGAGVAGLESAIVLASKGFKVAVVESKPAEKIGDKTCGDAIGIHHFEKISLEIPSKV 64
Query: 108 IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVR----REVLDAYLRERAEKNGASVING 163
ID K +K+ SPS + + P E + + R + +L+ L++R E + V+
Sbjct: 65 IDYKYRGVKIYSPS----EKHGLIVPGEGVSVNRVRFGQWLLEEALKKRVELYDSYVLTD 120
Query: 164 LFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGAN----SRVAKSINA 219
+ +K D+ E K G L+ +A I A GA S++ +
Sbjct: 121 VIIKNDM------------VEEVRVKKVNGPVVELKANAFIDASGARPALRSKLPDTWPI 168
Query: 220 GD----YDYAIAFQERVK----IPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDH--- 268
D D+ IA++E ++ +P+E Y A +Y+ +V+P Y W+FPK D
Sbjct: 169 SDKPFTTDFNIAYREVIRSVNPMPEEDSKY----ALIYLNAEVAPGGYWWLFPKSDDRVV 224
Query: 269 VAVGTGTVTH-----KGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRV 323
+ +G G V + + + +K+ L R R GG I+ P P + V
Sbjct: 225 LNIGLGVVWNGVYNPRHNYEKY-LKPRFRGDLIHAGGGIVPT------RRPLPTLVWRNV 277
Query: 324 ALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYW 383
+VGDAA V G GI + ++ + + I G E G +DE + + K+ + Y
Sbjct: 278 GVVGDAAYTVNPVHGGGIGSSLEAAYIVSTYIGNGLEAGG--VDEKKVWEANIKYMQAYG 335
Query: 384 PTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSY---LYKRVVPGNPLEDL 437
LD+L+ Y+QK++ D + L ++V G+ + DL
Sbjct: 336 AKQAGLDILRM-------------------YLQKLSNDDFEWILKNKIVDGSSVYDL 373
>gi|424487106|ref|ZP_17935734.1| FAD dependent oxidoreductase [Escherichia coli TW09098]
gi|425372809|ref|ZP_18757544.1| FAD dependent oxidoreductase [Escherichia coli EC1864]
gi|390809913|gb|EIO76689.1| FAD dependent oxidoreductase [Escherichia coli TW09098]
gi|408293725|gb|EKJ12146.1| FAD dependent oxidoreductase [Escherichia coli EC1864]
Length = 429
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 136/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDILVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V DI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLADIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNDGVMIVGDAAGF 306
>gi|417121363|ref|ZP_11970791.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 97.0246]
gi|386148215|gb|EIG94652.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 97.0246]
Length = 429
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 137/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G L+ + V+ ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILQANVVVLADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNEGVMIVGDAAGF 306
>gi|357414936|ref|YP_004926672.1| geranylgeranyl reductase [Streptomyces flavogriseus ATCC 33331]
gi|320012305|gb|ADW07155.1| geranylgeranyl reductase [Streptomyces flavogriseus ATCC 33331]
Length = 436
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 106/252 (42%), Gaps = 62/252 (24%)
Query: 137 IGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKR 196
G++ R DA L E A+K GA + G+ + E GT V ++R
Sbjct: 125 FGLINRPEFDAGLVEEAQKAGAELRTGV--------------TVTRVEQHGTA--VPDRR 168
Query: 197 TLEV----------DAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLA 246
T+ V AV+GADG+ R+ + + + + +P E +A
Sbjct: 169 TVAVVLSGGETVLARAVVGADGSAGRIGAHVGVKLDQVDLGLEAEIPVP-------ETVA 221
Query: 247 EMYVGDDV-----SPDFYGWVFPKCDHVAVGTGTVTHKGD-----------IKKFQLATR 290
E + G + P YGWVFPK D + VG ++ +GD + + LA
Sbjct: 222 EDWAGRVLIDWGPMPGSYGWVFPKGDTLTVGV--ISARGDGAGTKRYLEDFVGRLGLAG- 278
Query: 291 NRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
+ I G + R + P LS GRV + GDAAG + + EGI FA +SGR
Sbjct: 279 --FEPTISSGHLTRCRSEDSP-------LSRGRVVVCGDAAGLLEPWTREGISFALRSGR 329
Query: 350 MCAEAIIEGSEN 361
+ E + +E+
Sbjct: 330 LAGEWAVRIAES 341
>gi|260868189|ref|YP_003234591.1| putative oxidoreductase [Escherichia coli O111:H- str. 11128]
gi|415817488|ref|ZP_11507619.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli OK1180]
gi|417195320|ref|ZP_12015734.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 4.0522]
gi|417212941|ref|ZP_12022337.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli JB1-95]
gi|417591785|ref|ZP_12242484.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli 2534-86]
gi|419197032|ref|ZP_13740425.1| FAD binding domain protein [Escherichia coli DEC8A]
gi|419203201|ref|ZP_13746402.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC8B]
gi|419221393|ref|ZP_13764328.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC8E]
gi|419892391|ref|ZP_14412413.1| oxidoreductase [Escherichia coli O111:H8 str. CVM9570]
gi|419896030|ref|ZP_14415792.1| oxidoreductase [Escherichia coli O111:H8 str. CVM9574]
gi|420091836|ref|ZP_14603572.1| oxidoreductase [Escherichia coli O111:H8 str. CVM9602]
gi|420094797|ref|ZP_14606365.1| oxidoreductase [Escherichia coli O111:H8 str. CVM9634]
gi|424771330|ref|ZP_18198480.1| oxidoreductase [Escherichia coli O111:H8 str. CFSAN001632]
gi|257764545|dbj|BAI36040.1| predicted oxidoreductase [Escherichia coli O111:H- str. 11128]
gi|323181017|gb|EFZ66555.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli OK1180]
gi|345340445|gb|EGW72863.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli 2534-86]
gi|378048344|gb|EHW10698.1| FAD binding domain protein [Escherichia coli DEC8A]
gi|378052162|gb|EHW14472.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC8B]
gi|378067953|gb|EHW30064.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC8E]
gi|386189362|gb|EIH78128.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli 4.0522]
gi|386194617|gb|EIH88864.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
domain protein [Escherichia coli JB1-95]
gi|388347791|gb|EIL13441.1| oxidoreductase [Escherichia coli O111:H8 str. CVM9570]
gi|388359393|gb|EIL23713.1| oxidoreductase [Escherichia coli O111:H8 str. CVM9574]
gi|394382151|gb|EJE59803.1| oxidoreductase [Escherichia coli O111:H8 str. CVM9602]
gi|394395222|gb|EJE71695.1| oxidoreductase [Escherichia coli O111:H8 str. CVM9634]
gi|421940681|gb|EKT98131.1| oxidoreductase [Escherichia coli O111:H8 str. CFSAN001632]
Length = 429
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 133/310 (42%), Gaps = 45/310 (14%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP----LDIID 109
V+G G AG AA +A+ G++ +IER CK G E +P ++
Sbjct: 10 VVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVE 69
Query: 110 RKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
RKVT+ K + S V +D Q P V R LD +L E+AE+ GA I G+
Sbjct: 70 RKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGV 129
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN---AGD 221
++D V + G + G LE + VI ADG NS + +S+ A D
Sbjct: 130 --RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGRSLGMVPASD 177
Query: 222 -YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTG 274
+ YA+ +E + + E+ + E A ++ G S G F + ++ G
Sbjct: 178 PHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLYTNKDSISLG 236
Query: 275 TVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR---PRRLSGR 322
V GDI Q + +D I G K++ AH +PE P+ ++
Sbjct: 237 LVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGSKLLEYSAHMVPEGGLAMVPQMVNDG 296
Query: 323 VALVGDAAGY 332
V +VGDAAG+
Sbjct: 297 VMIVGDAAGF 306
>gi|329941766|ref|ZP_08291031.1| hydrogenase, geranylgeranyl reductase family [Streptomyces
griseoaurantiacus M045]
gi|329299483|gb|EGG43383.1| hydrogenase, geranylgeranyl reductase family [Streptomyces
griseoaurantiacus M045]
Length = 388
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 122/310 (39%), Gaps = 61/310 (19%)
Query: 77 FLIERK-LDNCKPCGGAI--PL--CMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTL 131
L+E+ L K CGG I P + FDLP K+ ++ SN
Sbjct: 28 LLLEKADLPRYKTCGGGIIGPSRDTLPPGFDLPFK------DKVHAVTFSNNGRFTRTRR 81
Query: 132 KPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGG 191
G++ R D L E A+K GA + G + E G
Sbjct: 82 SRQMLFGLINRPEFDQQLVEHAQKAGAELRTG--------------ATVVRVEQHGA--A 125
Query: 192 VGEKRTLEV----------DAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVY 241
V ++RT+ V AV+GADG+ SR+ + + + + +P
Sbjct: 126 VPDRRTVAVVLQGGETVLARAVVGADGSASRIGAHVGVKLDQVDLGLESEIPVP------ 179
Query: 242 YENLAEMYVGDDV-----SPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLAT------R 290
E +AE + G + P YGWVFPK D + VG + +G K L
Sbjct: 180 -ETVAEDWKGRVLIDWGPMPGSYGWVFPKGDTLTVGVISARGEGAATKRYLEDFVARLGL 238
Query: 291 NRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRM 350
+ + + G + R A + P R GRV + GDAAG + + EGI FA +SGR+
Sbjct: 239 SGFEPSVSSGHLTRCRAE---DSPLTR---GRVLVCGDAAGLLEPWTREGISFALRSGRL 292
Query: 351 CAEAIIEGSE 360
E + SE
Sbjct: 293 AGEWAVRISE 302
>gi|291566939|dbj|BAI89211.1| geranylgeranyl reductase family protein [Arthrospira platensis
NIES-39]
Length = 363
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 130/330 (39%), Gaps = 73/330 (22%)
Query: 69 LAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPL-----DIIDRKVTKMKMISPSN 122
LAK G ++E+ KPCGG + + FD +D+ K+ P+
Sbjct: 20 LAKRGRNPLVVEKNSWPRNKPCGGGVSPAIASWFDFDFTPAISTTVDKIRYTFKLADPAE 79
Query: 123 VAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----INGLFMKMD----LPRN 173
A+ KP + MVRR+V DA+L ++A+ GAS + G+ K D N
Sbjct: 80 TAIS-----KP---MWMVRRDVFDAFLMQQAQDQGASFQPNTEVTGIKFKGDSWQLTTAN 131
Query: 174 FEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVK 233
E Y DG KG VG L+ +N R+A A F+
Sbjct: 132 GETLTGRYLIAADGAKGPVGSWLRLKQ--------SNPRLAMVTEATQLSDVPTFE---- 179
Query: 234 IPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRA 293
MV +L W FPK D V T K +N +
Sbjct: 180 ---FGMVKNGSL---------------WGFPKADGYTVSAATFRGKD--------PKNLS 213
Query: 294 KDKILGGKIIRVE-AHPIPEHPR-----PRRLSGRVALV-GDAAGYVTKCSGEGIYFAAK 346
+D K + ++ + PI EHP R L G+ AL+ G+AA V SGEGI A
Sbjct: 214 QDLSQYLKALGLDPSSPIVEHPLRLWDGDRTLHGQNALIAGEAASIVDPLSGEGIRPAIL 273
Query: 347 SGRMCAEAIIEGSENGTRMIDEGDLRKYLE 376
+G AEA I+ + G D+ L KY E
Sbjct: 274 TGVKAAEA-IDAAIGG----DQSALEKYTE 298
>gi|16081459|ref|NP_393806.1| fixC protein related [Thermoplasma acidophilum DSM 1728]
gi|10639499|emb|CAC11471.1| fixC protein related [Thermoplasma acidophilum]
Length = 428
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 161/378 (42%), Gaps = 78/378 (20%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAI----PLCMV---GEFDLP 104
V VIG GPAG +AA LA+ G+ L+ER K GA+ L V E P
Sbjct: 6 VIVIGAGPAGSSAAIKLAQGGMNVLLVERGDPPGTKNVSGAVLWGDELSKVVPDWERSAP 65
Query: 105 LDIIDRKVTKMK---MISPSNVAVDI-GQTLKPHEYIGMVRREVLDAYLRERAEKNGASV 160
I+R VT+ + + S +A+ Q L + ++ R D +L +A+ GA +
Sbjct: 66 ---IERYVTRKEVAFLTEKSKIAISYSSQELMEKKSGKIIVRGKFDQWLARKAKDAGAML 122
Query: 161 INGLFMKMDLPRNFEQPYVLYYTEYDGTK--GGVGEKRTLEVDAVIGADGANSRVAKSIN 218
+ G+ + V+ DG K G + + + DAVI A+GAN RV IN
Sbjct: 123 VTGITV---------DKLVI-----DGGKVIGVMQDGDVITSDAVIVAEGANPRVL--IN 166
Query: 219 AG------DYDYAIAFQERVKIP----------DEKMVYYENLAEMYVGDDVSPDFYGWV 262
+G D+D A+ +E +K+P D K Y ++ D + G++
Sbjct: 167 SGLRPKLSDHDVALGIKETIKLPENVINERFNVDSKGGYASEFVLGFLDDGLLSG--GFL 224
Query: 263 FPKCDHVAVGTGT---------VTHKGDIK-KFQLA--TRNRAKDKILGGKIIRVEAHPI 310
+ D +++G T +TH DI KF+ +N KD I AH +
Sbjct: 225 YTNRDTISLGIVTSLDRLRANGMTHSYDIMGKFEDHPFIKNLIKDGIPD----EYAAHLV 280
Query: 311 PE---HPRPRRLSGRVALVGDAAGYVTKCSG---EGIYFAAKSGRMCAEAIIEGSENGTR 364
PE P+ + GDAA + T +G +GI +A SG + AE I+E
Sbjct: 281 PEGGLASMPKLYGNGYLVAGDAAMF-TFSNGMVLQGINYAITSGMLAAETILENKGK--- 336
Query: 365 MIDEGDLRKYLEKWDKTY 382
I E L Y+ K +Y
Sbjct: 337 -ISEETLSTYVSKLRNSY 353
>gi|345854538|ref|ZP_08807359.1| hydrogenase [Streptomyces zinciresistens K42]
gi|345633994|gb|EGX55680.1| hydrogenase [Streptomyces zinciresistens K42]
Length = 420
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 99/240 (41%), Gaps = 40/240 (16%)
Query: 137 IGMVRREVLDAYLRERAEKNGASVINGLFMK------MDLPRNFEQPYVLYYTEYDGTKG 190
G++ R D L E A+K GA + G+ ++ +P VL E
Sbjct: 100 FGLINRPEFDQQLVEHAQKAGAELRTGVTVQRVEQHGSAVPDRRSVAVVLQGGE------ 153
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYV 250
TL AV+GADG+ SR+ + + + + +PD ++ +
Sbjct: 154 ------TLLARAVVGADGSASRIGAHVGVKLDQVDLGLEAEIPVPDTVAEDWQGRVLIDW 207
Query: 251 GDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD---------IKKFQLATRNRAKDKILGGK 301
G P YGWVFPK D + VG + +G I + LA + + G
Sbjct: 208 GP--MPGSYGWVFPKGDTLTVGVISARGEGAATKRYLEEFIGRLGLAG---FEPSVSSGH 262
Query: 302 IIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
+ R A P LS GRV + GDAAG + + EGI FA +SGR+ E + +E
Sbjct: 263 LTRCRAGDSP-------LSRGRVLVCGDAAGLLEPWTREGISFALRSGRLAGEWAVRIAE 315
>gi|406991552|gb|EKE11044.1| dehydrogenase (flavoprotein) [uncultured bacterium]
Length = 349
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 137/319 (42%), Gaps = 49/319 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAI---PLCMVGEFDLPLDII 108
V ++G GP G AE L +G +IE+ ++ K C G + + + +P DII
Sbjct: 9 VVIVGAGPGGLRCAEVLGASGKNVLIIEKNEMIGPKICAGGLTRKAISYLHNIGMPEDII 68
Query: 109 DRKVTKMKMISPS-NVAVDIGQTLKPHEYIGMVRREVLDAY-LRERAEKNGASVINGLFM 166
+ + ++ G ++ + R+ L + L + + +V +G
Sbjct: 69 ENTFDGIVFRKGGMRTRINFGSI-----FLYTINRKNLGQWQLGKLHDMKNVAVSSG--- 120
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAI 226
+ + +V+ +G+ + ++ D ++GADG+NS V + + +
Sbjct: 121 --TMVTKITKEHVI-----------IGKSQKIQYDFLVGADGSNSIVRRFLGIPTKRLGV 167
Query: 227 AFQERV----KIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTG----TVTH 278
A+Q + K D ++++ NL + Y W+FP +++GTG +
Sbjct: 168 AYQYIMPLSKKFSDIEIIFESNLFHAW---------YAWIFPYAKTLSIGTGYFPKIMPA 218
Query: 279 KGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSG 338
+ KKF + ++ K I + + +EAHPI R G V L GDAAG + SG
Sbjct: 219 EKSKKKF-MKWLDKEKISI---ENVPMEAHPINCDYRGHHF-GNVFLAGDAAGATSGFSG 273
Query: 339 EGIYFAAKSGRMCAEAIIE 357
EGIY A G A+ I+
Sbjct: 274 EGIYQALIFGGEIAQIILN 292
>gi|332669448|ref|YP_004452456.1| geranylgeranyl reductase [Cellulomonas fimi ATCC 484]
gi|332338486|gb|AEE45069.1| geranylgeranyl reductase [Cellulomonas fimi ATCC 484]
Length = 431
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 145/345 (42%), Gaps = 32/345 (9%)
Query: 47 TNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEF---D 102
T + V V+G GPAG +AA A G++ L+E+ K CG + V E
Sbjct: 5 TTDDADVIVVGAGPAGSSAAFHCASAGLDVLLLEKASFPRDKVCGDGLTPRAVAELVRMG 64
Query: 103 LPLDIIDRKVTK--MKMISPSNVAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNGAS 159
LPL D + ++++ + L + G+ R R LD L A GA
Sbjct: 65 LPLREQDGWIRNRGLRVLGGGHRLELPWPELSSYPSYGLARSRMSLDHTLASHARAAGAK 124
Query: 160 VINGLFMKMDLPRNFEQPYVLYYTEYDGTKGG--VGEKRTLEVDAVIGADGANSRVAKSI 217
++ + + R+ V+ T G G++ VI ADG ++R+A +
Sbjct: 125 LVERTSVTGPV-RDERTGRVVGVTARPVDDAGHRSGDEVVYRAPVVIAADGVSTRLATAA 183
Query: 218 NAGDYD---YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDF---YGWVFPKCDHVA- 270
D +A + + P + E+ E++ G+ + YGW+F D A
Sbjct: 184 GRTKRDDRPMGVAVRTYFRTPRHDDPWMESHLELWDGEPGRSNLMPGYGWIFSLGDGTAN 243
Query: 271 VGTGTVTHKGDIKK------FQLATRNR------AKDKILGGKIIRVEAHPIPEHPRPRR 318
VG G+V+ K F RN D +G +R A P+ + P
Sbjct: 244 VGLGSVSSTAAATKVDYKSLFAAWMRNAPAEWEFTPDNQVG--PVRGAALPMGFNRGPL- 300
Query: 319 LSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGT 363
+G + L GD+AG ++ +GEGI + ++GR+ A+AI +G GT
Sbjct: 301 YAGGLLLAGDSAGMISPFNGEGIAYGLQAGRVAADAIAQGLARGT 345
>gi|419136445|ref|ZP_13681246.1| FAD binding domain protein [Escherichia coli DEC5E]
gi|377985633|gb|EHV48845.1| FAD binding domain protein [Escherichia coli DEC5E]
Length = 429
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 136/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDILVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V DI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLADIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNDGVMIVGDAAGF 306
>gi|15802111|ref|NP_288133.1| hypothetical protein Z2728 [Escherichia coli O157:H7 str. EDL933]
gi|15831660|ref|NP_310433.1| hypothetical protein ECs2406 [Escherichia coli O157:H7 str. Sakai]
gi|168751889|ref|ZP_02776911.1| protein FixC homolog [Escherichia coli O157:H7 str. EC4113]
gi|168756698|ref|ZP_02781705.1| protein FixC homolog [Escherichia coli O157:H7 str. EC4401]
gi|168762239|ref|ZP_02787246.1| protein FixC homolog [Escherichia coli O157:H7 str. EC4501]
gi|168770458|ref|ZP_02795465.1| protein FixC homolog [Escherichia coli O157:H7 str. EC4486]
gi|168775003|ref|ZP_02800010.1| protein FixC homolog [Escherichia coli O157:H7 str. EC4196]
gi|168782112|ref|ZP_02807119.1| protein FixC homolog [Escherichia coli O157:H7 str. EC4076]
gi|168789834|ref|ZP_02814841.1| protein FixC homolog [Escherichia coli O157:H7 str. EC869]
gi|168800122|ref|ZP_02825129.1| protein FixC homolog [Escherichia coli O157:H7 str. EC508]
gi|195937383|ref|ZP_03082765.1| hypothetical protein EscherichcoliO157_13187 [Escherichia coli
O157:H7 str. EC4024]
gi|208810646|ref|ZP_03252522.1| protein FixC homolog [Escherichia coli O157:H7 str. EC4206]
gi|208816953|ref|ZP_03258073.1| protein FixC homolog [Escherichia coli O157:H7 str. EC4045]
gi|208821272|ref|ZP_03261592.1| protein FixC homolog [Escherichia coli O157:H7 str. EC4042]
gi|209396032|ref|YP_002270769.1| hypothetical protein ECH74115_2416 [Escherichia coli O157:H7 str.
EC4115]
gi|217328615|ref|ZP_03444696.1| protein FixC homolog [Escherichia coli O157:H7 str. TW14588]
gi|254793316|ref|YP_003078153.1| hypothetical protein ECSP_2266 [Escherichia coli O157:H7 str.
TW14359]
gi|261227856|ref|ZP_05942137.1| predicted oxidoreductase with FAD/NAD(P)-binding domain
[Escherichia coli O157:H7 str. FRIK2000]
gi|261258411|ref|ZP_05950944.1| predicted oxidoreductase with FAD/NAD(P)-binding domain
[Escherichia coli O157:H7 str. FRIK966]
gi|291282829|ref|YP_003499647.1| sulfate transport protein CysZ [Escherichia coli O55:H7 str.
CB9615]
gi|387506944|ref|YP_006159200.1| oxidoreductase [Escherichia coli O55:H7 str. RM12579]
gi|387882803|ref|YP_006313105.1| hypothetical protein CDCO157_2240 [Escherichia coli Xuzhou21]
gi|416312198|ref|ZP_11657399.1| putative electron transfer flavoprotein-quinone oxidoreductase FixC
[Escherichia coli O157:H7 str. 1044]
gi|416322913|ref|ZP_11664522.1| putative electron transfer flavoprotein-quinone oxidoreductase FixC
[Escherichia coli O157:H7 str. EC1212]
gi|416327171|ref|ZP_11667178.1| putative electron transfer flavoprotein-quinone oxidoreductase FixC
[Escherichia coli O157:H7 str. 1125]
gi|416773532|ref|ZP_11873739.1| oxidoreductase [Escherichia coli O157:H7 str. G5101]
gi|416785341|ref|ZP_11878637.1| oxidoreductase [Escherichia coli O157:H- str. 493-89]
gi|416796333|ref|ZP_11883552.1| oxidoreductase [Escherichia coli O157:H- str. H 2687]
gi|416818192|ref|ZP_11892892.1| oxidoreductase [Escherichia coli O55:H7 str. 3256-97]
gi|416827306|ref|ZP_11897471.1| oxidoreductase [Escherichia coli O55:H7 str. USDA 5905]
gi|416828603|ref|ZP_11898091.1| oxidoreductase [Escherichia coli O157:H7 str. LSU-61]
gi|419045291|ref|ZP_13592237.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC3A]
gi|419051224|ref|ZP_13598105.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC3B]
gi|419057222|ref|ZP_13604037.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC3C]
gi|419062600|ref|ZP_13609339.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC3D]
gi|419069507|ref|ZP_13615143.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC3E]
gi|419075412|ref|ZP_13620944.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC3F]
gi|419080737|ref|ZP_13626194.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC4A]
gi|419086371|ref|ZP_13631741.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC4B]
gi|419092550|ref|ZP_13637843.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC4C]
gi|419098364|ref|ZP_13643577.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC4D]
gi|419103997|ref|ZP_13649138.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC4E]
gi|419109550|ref|ZP_13654617.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC4F]
gi|419120457|ref|ZP_13665423.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC5B]
gi|419126357|ref|ZP_13671246.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC5C]
gi|419131626|ref|ZP_13676467.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC5D]
gi|420269587|ref|ZP_14771960.1| FAD dependent oxidoreductase [Escherichia coli PA22]
gi|420275449|ref|ZP_14777750.1| FAD dependent oxidoreductase [Escherichia coli PA40]
gi|420280670|ref|ZP_14782917.1| FAD dependent oxidoreductase [Escherichia coli TW06591]
gi|420286931|ref|ZP_14789128.1| FAD dependent oxidoreductase [Escherichia coli TW10246]
gi|420292431|ref|ZP_14794563.1| FAD dependent oxidoreductase [Escherichia coli TW11039]
gi|420298218|ref|ZP_14800281.1| FAD dependent oxidoreductase [Escherichia coli TW09109]
gi|420304217|ref|ZP_14806224.1| FAD dependent oxidoreductase [Escherichia coli TW10119]
gi|420309688|ref|ZP_14811632.1| FAD dependent oxidoreductase [Escherichia coli EC1738]
gi|420315230|ref|ZP_14817113.1| FAD dependent oxidoreductase [Escherichia coli EC1734]
gi|421812365|ref|ZP_16248113.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli 8.0416]
gi|421818397|ref|ZP_16253910.1| FAD binding domain protein [Escherichia coli 10.0821]
gi|421823968|ref|ZP_16259363.1| FAD dependent oxidoreductase [Escherichia coli FRIK920]
gi|421830909|ref|ZP_16266207.1| FAD dependent oxidoreductase [Escherichia coli PA7]
gi|423710851|ref|ZP_17685184.1| FAD dependent oxidoreductase [Escherichia coli PA31]
gi|424077528|ref|ZP_17814583.1| FAD dependent oxidoreductase [Escherichia coli FDA505]
gi|424083902|ref|ZP_17820464.1| FAD dependent oxidoreductase [Escherichia coli FDA517]
gi|424090307|ref|ZP_17826337.1| FAD dependent oxidoreductase [Escherichia coli FRIK1996]
gi|424096845|ref|ZP_17832268.1| FAD dependent oxidoreductase [Escherichia coli FRIK1985]
gi|424103185|ref|ZP_17838062.1| FAD dependent oxidoreductase [Escherichia coli FRIK1990]
gi|424109908|ref|ZP_17844228.1| FAD dependent oxidoreductase [Escherichia coli 93-001]
gi|424115618|ref|ZP_17849549.1| FAD dependent oxidoreductase [Escherichia coli PA3]
gi|424121984|ref|ZP_17855398.1| FAD dependent oxidoreductase [Escherichia coli PA5]
gi|424128097|ref|ZP_17861075.1| FAD dependent oxidoreductase [Escherichia coli PA9]
gi|424134248|ref|ZP_17866795.1| FAD dependent oxidoreductase [Escherichia coli PA10]
gi|424140937|ref|ZP_17872916.1| FAD dependent oxidoreductase [Escherichia coli PA14]
gi|424147362|ref|ZP_17878825.1| FAD dependent oxidoreductase [Escherichia coli PA15]
gi|424153300|ref|ZP_17884316.1| FAD dependent oxidoreductase [Escherichia coli PA24]
gi|424235477|ref|ZP_17889768.1| FAD dependent oxidoreductase [Escherichia coli PA25]
gi|424313380|ref|ZP_17895673.1| FAD dependent oxidoreductase [Escherichia coli PA28]
gi|424449721|ref|ZP_17901497.1| FAD dependent oxidoreductase [Escherichia coli PA32]
gi|424455891|ref|ZP_17907120.1| FAD dependent oxidoreductase [Escherichia coli PA33]
gi|424462192|ref|ZP_17912771.1| FAD dependent oxidoreductase [Escherichia coli PA39]
gi|424468594|ref|ZP_17918509.1| FAD dependent oxidoreductase [Escherichia coli PA41]
gi|424475177|ref|ZP_17924588.1| FAD dependent oxidoreductase [Escherichia coli PA42]
gi|424480925|ref|ZP_17929967.1| FAD dependent oxidoreductase [Escherichia coli TW07945]
gi|424493478|ref|ZP_17941404.1| FAD dependent oxidoreductase [Escherichia coli TW09195]
gi|424500367|ref|ZP_17947368.1| FAD dependent oxidoreductase [Escherichia coli EC4203]
gi|424506521|ref|ZP_17953035.1| FAD dependent oxidoreductase [Escherichia coli EC4196]
gi|424514007|ref|ZP_17958791.1| FAD dependent oxidoreductase [Escherichia coli TW14313]
gi|424520298|ref|ZP_17964493.1| FAD dependent oxidoreductase [Escherichia coli TW14301]
gi|424526207|ref|ZP_17969992.1| FAD dependent oxidoreductase [Escherichia coli EC4421]
gi|424532369|ref|ZP_17975775.1| FAD dependent oxidoreductase [Escherichia coli EC4422]
gi|424538374|ref|ZP_17981392.1| FAD dependent oxidoreductase [Escherichia coli EC4013]
gi|424544339|ref|ZP_17986865.1| FAD dependent oxidoreductase [Escherichia coli EC4402]
gi|424550606|ref|ZP_17992554.1| FAD dependent oxidoreductase [Escherichia coli EC4439]
gi|424556854|ref|ZP_17998332.1| FAD dependent oxidoreductase [Escherichia coli EC4436]
gi|424563199|ref|ZP_18004258.1| FAD dependent oxidoreductase [Escherichia coli EC4437]
gi|424569271|ref|ZP_18009923.1| FAD dependent oxidoreductase [Escherichia coli EC4448]
gi|424575401|ref|ZP_18015575.1| FAD dependent oxidoreductase [Escherichia coli EC1845]
gi|424581258|ref|ZP_18020980.1| FAD dependent oxidoreductase [Escherichia coli EC1863]
gi|425098105|ref|ZP_18500900.1| FAD binding domain protein [Escherichia coli 3.4870]
gi|425104283|ref|ZP_18506649.1| FAD binding domain protein [Escherichia coli 5.2239]
gi|425110112|ref|ZP_18512110.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli 6.0172]
gi|425125901|ref|ZP_18527166.1| FAD binding domain protein [Escherichia coli 8.0586]
gi|425131747|ref|ZP_18532652.1| FAD binding domain protein [Escherichia coli 8.2524]
gi|425138128|ref|ZP_18538598.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli 10.0833]
gi|425144087|ref|ZP_18544148.1| FAD binding domain protein [Escherichia coli 10.0869]
gi|425150156|ref|ZP_18549838.1| FAD binding domain protein [Escherichia coli 88.0221]
gi|425156000|ref|ZP_18555328.1| FAD dependent oxidoreductase [Escherichia coli PA34]
gi|425162508|ref|ZP_18561448.1| FAD dependent oxidoreductase [Escherichia coli FDA506]
gi|425168183|ref|ZP_18566730.1| FAD dependent oxidoreductase [Escherichia coli FDA507]
gi|425174274|ref|ZP_18572446.1| FAD dependent oxidoreductase [Escherichia coli FDA504]
gi|425180215|ref|ZP_18577997.1| FAD dependent oxidoreductase [Escherichia coli FRIK1999]
gi|425186449|ref|ZP_18583809.1| FAD dependent oxidoreductase [Escherichia coli FRIK1997]
gi|425193320|ref|ZP_18590170.1| FAD dependent oxidoreductase [Escherichia coli NE1487]
gi|425199710|ref|ZP_18596028.1| FAD dependent oxidoreductase [Escherichia coli NE037]
gi|425206159|ref|ZP_18602040.1| FAD dependent oxidoreductase [Escherichia coli FRIK2001]
gi|425211895|ref|ZP_18607381.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli PA4]
gi|425218023|ref|ZP_18613069.1| FAD dependent oxidoreductase [Escherichia coli PA23]
gi|425224538|ref|ZP_18619102.1| FAD dependent oxidoreductase [Escherichia coli PA49]
gi|425230772|ref|ZP_18624901.1| FAD dependent oxidoreductase [Escherichia coli PA45]
gi|425236923|ref|ZP_18630683.1| FAD dependent oxidoreductase [Escherichia coli TT12B]
gi|425242986|ref|ZP_18636367.1| FAD dependent oxidoreductase [Escherichia coli MA6]
gi|425249147|ref|ZP_18642143.1| FAD dependent oxidoreductase [Escherichia coli 5905]
gi|425254915|ref|ZP_18647509.1| FAD dependent oxidoreductase [Escherichia coli CB7326]
gi|425261210|ref|ZP_18653298.1| FAD dependent oxidoreductase [Escherichia coli EC96038]
gi|425267246|ref|ZP_18658931.1| FAD dependent oxidoreductase [Escherichia coli 5412]
gi|425294701|ref|ZP_18684988.1| FAD dependent oxidoreductase [Escherichia coli PA38]
gi|425311394|ref|ZP_18700640.1| FAD dependent oxidoreductase [Escherichia coli EC1735]
gi|425317319|ref|ZP_18706173.1| FAD dependent oxidoreductase [Escherichia coli EC1736]
gi|425323423|ref|ZP_18711857.1| FAD dependent oxidoreductase [Escherichia coli EC1737]
gi|425329583|ref|ZP_18717553.1| FAD dependent oxidoreductase [Escherichia coli EC1846]
gi|425335750|ref|ZP_18723241.1| FAD dependent oxidoreductase [Escherichia coli EC1847]
gi|425342177|ref|ZP_18729158.1| FAD dependent oxidoreductase [Escherichia coli EC1848]
gi|425347989|ref|ZP_18734562.1| FAD dependent oxidoreductase [Escherichia coli EC1849]
gi|425354290|ref|ZP_18740436.1| FAD dependent oxidoreductase [Escherichia coli EC1850]
gi|425360260|ref|ZP_18745994.1| FAD dependent oxidoreductase [Escherichia coli EC1856]
gi|425366385|ref|ZP_18751674.1| FAD dependent oxidoreductase [Escherichia coli EC1862]
gi|425385633|ref|ZP_18769281.1| FAD dependent oxidoreductase [Escherichia coli EC1866]
gi|425392324|ref|ZP_18775523.1| FAD dependent oxidoreductase [Escherichia coli EC1868]
gi|425398479|ref|ZP_18781268.1| FAD dependent oxidoreductase [Escherichia coli EC1869]
gi|425404511|ref|ZP_18786842.1| FAD dependent oxidoreductase [Escherichia coli EC1870]
gi|425411084|ref|ZP_18792928.1| FAD dependent oxidoreductase [Escherichia coli NE098]
gi|425417391|ref|ZP_18798737.1| FAD dependent oxidoreductase [Escherichia coli FRIK523]
gi|425428647|ref|ZP_18809342.1| FAD dependent oxidoreductase [Escherichia coli 0.1304]
gi|428946992|ref|ZP_19019381.1| FAD binding domain protein [Escherichia coli 88.1467]
gi|428953242|ref|ZP_19025092.1| FAD binding domain protein [Escherichia coli 88.1042]
gi|428959164|ref|ZP_19030545.1| FAD binding domain protein [Escherichia coli 89.0511]
gi|428965618|ref|ZP_19036475.1| FAD binding domain protein [Escherichia coli 90.0091]
gi|428971351|ref|ZP_19041772.1| FAD binding domain protein [Escherichia coli 90.0039]
gi|428978027|ref|ZP_19047917.1| FAD binding domain protein [Escherichia coli 90.2281]
gi|428983892|ref|ZP_19053349.1| FAD binding domain protein [Escherichia coli 93.0055]
gi|428989988|ref|ZP_19059036.1| FAD binding domain protein [Escherichia coli 93.0056]
gi|428995762|ref|ZP_19064444.1| FAD binding domain protein [Escherichia coli 94.0618]
gi|429001866|ref|ZP_19070110.1| FAD binding domain protein [Escherichia coli 95.0183]
gi|429008130|ref|ZP_19075736.1| FAD binding domain protein [Escherichia coli 95.1288]
gi|429014619|ref|ZP_19081589.1| FAD binding domain protein [Escherichia coli 95.0943]
gi|429020522|ref|ZP_19087098.1| FAD binding domain protein [Escherichia coli 96.0428]
gi|429026531|ref|ZP_19092627.1| FAD binding domain protein [Escherichia coli 96.0427]
gi|429032609|ref|ZP_19098217.1| FAD binding domain protein [Escherichia coli 96.0939]
gi|429038755|ref|ZP_19103946.1| FAD binding domain protein [Escherichia coli 96.0932]
gi|429044691|ref|ZP_19109459.1| FAD binding domain protein [Escherichia coli 96.0107]
gi|429050202|ref|ZP_19114805.1| FAD binding domain protein [Escherichia coli 97.0003]
gi|429055465|ref|ZP_19119868.1| FAD binding domain protein [Escherichia coli 97.1742]
gi|429061115|ref|ZP_19125184.1| FAD binding domain protein [Escherichia coli 97.0007]
gi|429067211|ref|ZP_19130758.1| FAD binding domain protein [Escherichia coli 99.0672]
gi|429073213|ref|ZP_19136505.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli 99.0678]
gi|429078540|ref|ZP_19141705.1| FAD binding domain protein [Escherichia coli 99.0713]
gi|429826458|ref|ZP_19357596.1| FAD binding domain protein [Escherichia coli 96.0109]
gi|429832731|ref|ZP_19363214.1| FAD binding domain protein [Escherichia coli 97.0010]
gi|444924903|ref|ZP_21244310.1| FAD binding domain protein [Escherichia coli 09BKT078844]
gi|444930753|ref|ZP_21249839.1| FAD binding domain protein [Escherichia coli 99.0814]
gi|444936040|ref|ZP_21254882.1| FAD binding domain protein [Escherichia coli 99.0815]
gi|444941680|ref|ZP_21260254.1| FAD binding domain protein [Escherichia coli 99.0816]
gi|444947282|ref|ZP_21265638.1| FAD binding domain protein [Escherichia coli 99.0839]
gi|444952869|ref|ZP_21271011.1| FAD binding domain protein [Escherichia coli 99.0848]
gi|444958367|ref|ZP_21276271.1| FAD binding domain protein [Escherichia coli 99.1753]
gi|444963579|ref|ZP_21281243.1| FAD binding domain protein [Escherichia coli 99.1775]
gi|444969424|ref|ZP_21286831.1| FAD binding domain protein [Escherichia coli 99.1793]
gi|444974767|ref|ZP_21291951.1| FAD binding domain protein [Escherichia coli 99.1805]
gi|444980258|ref|ZP_21297202.1| FAD binding domain protein [Escherichia coli ATCC 700728]
gi|444985578|ref|ZP_21302394.1| FAD binding domain protein [Escherichia coli PA11]
gi|444990866|ref|ZP_21307549.1| FAD binding domain protein [Escherichia coli PA19]
gi|444996069|ref|ZP_21312608.1| FAD binding domain protein [Escherichia coli PA13]
gi|445001695|ref|ZP_21318115.1| FAD binding domain protein [Escherichia coli PA2]
gi|445007151|ref|ZP_21323436.1| FAD binding domain protein [Escherichia coli PA47]
gi|445012283|ref|ZP_21328424.1| FAD binding domain protein [Escherichia coli PA48]
gi|445018020|ref|ZP_21334016.1| FAD binding domain protein [Escherichia coli PA8]
gi|445023666|ref|ZP_21339526.1| FAD binding domain protein [Escherichia coli 7.1982]
gi|445028906|ref|ZP_21344621.1| FAD binding domain protein [Escherichia coli 99.1781]
gi|445034354|ref|ZP_21349917.1| FAD binding domain protein [Escherichia coli 99.1762]
gi|445040059|ref|ZP_21355466.1| FAD binding domain protein [Escherichia coli PA35]
gi|445045191|ref|ZP_21360483.1| FAD binding domain protein [Escherichia coli 3.4880]
gi|445050813|ref|ZP_21365909.1| FAD binding domain protein [Escherichia coli 95.0083]
gi|445056596|ref|ZP_21371486.1| FAD binding domain protein [Escherichia coli 99.0670]
gi|452971136|ref|ZP_21969363.1| oxidoreductase FixC [Escherichia coli O157:H7 str. EC4009]
gi|12515707|gb|AAG56686.1|AE005393_3 flavoprotein; probably electron transport [Escherichia coli O157:H7
str. EDL933]
gi|13361873|dbj|BAB35829.1| flavoprotein [Escherichia coli O157:H7 str. Sakai]
gi|187769364|gb|EDU33208.1| protein FixC homolog [Escherichia coli O157:H7 str. EC4196]
gi|188014127|gb|EDU52249.1| protein FixC homolog [Escherichia coli O157:H7 str. EC4113]
gi|189000287|gb|EDU69273.1| protein FixC homolog [Escherichia coli O157:H7 str. EC4076]
gi|189356192|gb|EDU74611.1| protein FixC homolog [Escherichia coli O157:H7 str. EC4401]
gi|189360634|gb|EDU79053.1| protein FixC homolog [Escherichia coli O157:H7 str. EC4486]
gi|189367507|gb|EDU85923.1| protein FixC homolog [Escherichia coli O157:H7 str. EC4501]
gi|189370585|gb|EDU89001.1| protein FixC homolog [Escherichia coli O157:H7 str. EC869]
gi|189377570|gb|EDU95986.1| protein FixC homolog [Escherichia coli O157:H7 str. EC508]
gi|208725162|gb|EDZ74869.1| protein FixC homolog [Escherichia coli O157:H7 str. EC4206]
gi|208731296|gb|EDZ79985.1| protein FixC homolog [Escherichia coli O157:H7 str. EC4045]
gi|208741395|gb|EDZ89077.1| protein FixC homolog [Escherichia coli O157:H7 str. EC4042]
gi|209157432|gb|ACI34865.1| protein FixC homolog [Escherichia coli O157:H7 str. EC4115]
gi|209769018|gb|ACI82821.1| flavoprotein [Escherichia coli]
gi|209769020|gb|ACI82822.1| flavoprotein [Escherichia coli]
gi|209769022|gb|ACI82823.1| flavoprotein [Escherichia coli]
gi|209769024|gb|ACI82824.1| flavoprotein [Escherichia coli]
gi|209769026|gb|ACI82825.1| flavoprotein [Escherichia coli]
gi|217317962|gb|EEC26389.1| protein FixC homolog [Escherichia coli O157:H7 str. TW14588]
gi|254592716|gb|ACT72077.1| predicted oxidoreductase with FAD/NAD(P)-binding domain
[Escherichia coli O157:H7 str. TW14359]
gi|290762702|gb|ADD56663.1| putative sulfate transport protein CysZ [Escherichia coli O55:H7
str. CB9615]
gi|320188386|gb|EFW63048.1| putative electron transfer flavoprotein-quinone oxidoreductase FixC
[Escherichia coli O157:H7 str. EC1212]
gi|320641914|gb|EFX11282.1| oxidoreductase [Escherichia coli O157:H7 str. G5101]
gi|320647371|gb|EFX16179.1| oxidoreductase [Escherichia coli O157:H- str. 493-89]
gi|320652665|gb|EFX20934.1| oxidoreductase [Escherichia coli O157:H- str. H 2687]
gi|320653048|gb|EFX21244.1| oxidoreductase [Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320658733|gb|EFX26410.1| oxidoreductase [Escherichia coli O55:H7 str. USDA 5905]
gi|320668723|gb|EFX35528.1| oxidoreductase [Escherichia coli O157:H7 str. LSU-61]
gi|326342065|gb|EGD65846.1| putative electron transfer flavoprotein-quinone oxidoreductase FixC
[Escherichia coli O157:H7 str. 1044]
gi|326343618|gb|EGD67380.1| putative electron transfer flavoprotein-quinone oxidoreductase FixC
[Escherichia coli O157:H7 str. 1125]
gi|374358938|gb|AEZ40645.1| oxidoreductase [Escherichia coli O55:H7 str. RM12579]
gi|377894888|gb|EHU59301.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC3A]
gi|377895548|gb|EHU59959.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC3B]
gi|377906503|gb|EHU70745.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC3C]
gi|377911837|gb|EHU76002.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC3D]
gi|377914565|gb|EHU78687.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC3E]
gi|377923683|gb|EHU87644.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC3F]
gi|377928219|gb|EHU92130.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC4A]
gi|377932791|gb|EHU96637.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC4B]
gi|377943839|gb|EHV07548.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC4C]
gi|377944680|gb|EHV08382.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC4D]
gi|377949810|gb|EHV13441.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC4E]
gi|377958757|gb|EHV22269.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC4F]
gi|377968664|gb|EHV32055.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC5B]
gi|377976412|gb|EHV39723.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC5C]
gi|377977029|gb|EHV40330.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC5D]
gi|386796261|gb|AFJ29295.1| hypothetical protein CDCO157_2240 [Escherichia coli Xuzhou21]
gi|390645482|gb|EIN24659.1| FAD dependent oxidoreductase [Escherichia coli FDA517]
gi|390645628|gb|EIN24800.1| FAD dependent oxidoreductase [Escherichia coli FRIK1996]
gi|390646194|gb|EIN25320.1| FAD dependent oxidoreductase [Escherichia coli FDA505]
gi|390663791|gb|EIN41277.1| FAD dependent oxidoreductase [Escherichia coli 93-001]
gi|390665247|gb|EIN42558.1| FAD dependent oxidoreductase [Escherichia coli FRIK1985]
gi|390666217|gb|EIN43413.1| FAD dependent oxidoreductase [Escherichia coli FRIK1990]
gi|390681387|gb|EIN57180.1| FAD dependent oxidoreductase [Escherichia coli PA3]
gi|390684853|gb|EIN60457.1| FAD dependent oxidoreductase [Escherichia coli PA5]
gi|390685866|gb|EIN61321.1| FAD dependent oxidoreductase [Escherichia coli PA9]
gi|390702014|gb|EIN76231.1| FAD dependent oxidoreductase [Escherichia coli PA10]
gi|390703187|gb|EIN77226.1| FAD dependent oxidoreductase [Escherichia coli PA15]
gi|390703959|gb|EIN77949.1| FAD dependent oxidoreductase [Escherichia coli PA14]
gi|390715789|gb|EIN88625.1| FAD dependent oxidoreductase [Escherichia coli PA22]
gi|390727113|gb|EIN99533.1| FAD dependent oxidoreductase [Escherichia coli PA25]
gi|390727444|gb|EIN99852.1| FAD dependent oxidoreductase [Escherichia coli PA24]
gi|390729618|gb|EIO01778.1| FAD dependent oxidoreductase [Escherichia coli PA28]
gi|390745360|gb|EIO16167.1| FAD dependent oxidoreductase [Escherichia coli PA32]
gi|390746116|gb|EIO16875.1| FAD dependent oxidoreductase [Escherichia coli PA31]
gi|390747798|gb|EIO18343.1| FAD dependent oxidoreductase [Escherichia coli PA33]
gi|390759230|gb|EIO28628.1| FAD dependent oxidoreductase [Escherichia coli PA40]
gi|390770098|gb|EIO38987.1| FAD dependent oxidoreductase [Escherichia coli PA41]
gi|390771665|gb|EIO40321.1| FAD dependent oxidoreductase [Escherichia coli PA39]
gi|390772085|gb|EIO40732.1| FAD dependent oxidoreductase [Escherichia coli PA42]
gi|390782611|gb|EIO50245.1| FAD dependent oxidoreductase [Escherichia coli TW06591]
gi|390791111|gb|EIO58506.1| FAD dependent oxidoreductase [Escherichia coli TW10246]
gi|390796830|gb|EIO64096.1| FAD dependent oxidoreductase [Escherichia coli TW07945]
gi|390798230|gb|EIO65426.1| FAD dependent oxidoreductase [Escherichia coli TW11039]
gi|390808408|gb|EIO75247.1| FAD dependent oxidoreductase [Escherichia coli TW09109]
gi|390816903|gb|EIO83363.1| FAD dependent oxidoreductase [Escherichia coli TW10119]
gi|390829518|gb|EIO95118.1| FAD dependent oxidoreductase [Escherichia coli EC4203]
gi|390832792|gb|EIO98000.1| FAD dependent oxidoreductase [Escherichia coli TW09195]
gi|390834136|gb|EIO99102.1| FAD dependent oxidoreductase [Escherichia coli EC4196]
gi|390849404|gb|EIP12845.1| FAD dependent oxidoreductase [Escherichia coli TW14301]
gi|390850992|gb|EIP14328.1| FAD dependent oxidoreductase [Escherichia coli TW14313]
gi|390852331|gb|EIP15491.1| FAD dependent oxidoreductase [Escherichia coli EC4421]
gi|390863917|gb|EIP26046.1| FAD dependent oxidoreductase [Escherichia coli EC4422]
gi|390868250|gb|EIP30008.1| FAD dependent oxidoreductase [Escherichia coli EC4013]
gi|390873867|gb|EIP35037.1| FAD dependent oxidoreductase [Escherichia coli EC4402]
gi|390880773|gb|EIP41441.1| FAD dependent oxidoreductase [Escherichia coli EC4439]
gi|390885415|gb|EIP45655.1| FAD dependent oxidoreductase [Escherichia coli EC4436]
gi|390896850|gb|EIP56230.1| FAD dependent oxidoreductase [Escherichia coli EC4437]
gi|390900803|gb|EIP60015.1| FAD dependent oxidoreductase [Escherichia coli EC4448]
gi|390901135|gb|EIP60319.1| FAD dependent oxidoreductase [Escherichia coli EC1738]
gi|390908931|gb|EIP67732.1| FAD dependent oxidoreductase [Escherichia coli EC1734]
gi|390921069|gb|EIP79292.1| FAD dependent oxidoreductase [Escherichia coli EC1863]
gi|390922341|gb|EIP80440.1| FAD dependent oxidoreductase [Escherichia coli EC1845]
gi|408066951|gb|EKH01394.1| FAD dependent oxidoreductase [Escherichia coli PA7]
gi|408071356|gb|EKH05708.1| FAD dependent oxidoreductase [Escherichia coli FRIK920]
gi|408076617|gb|EKH10839.1| FAD dependent oxidoreductase [Escherichia coli PA34]
gi|408082288|gb|EKH16275.1| FAD dependent oxidoreductase [Escherichia coli FDA506]
gi|408084693|gb|EKH18456.1| FAD dependent oxidoreductase [Escherichia coli FDA507]
gi|408093489|gb|EKH26578.1| FAD dependent oxidoreductase [Escherichia coli FDA504]
gi|408099350|gb|EKH31999.1| FAD dependent oxidoreductase [Escherichia coli FRIK1999]
gi|408107067|gb|EKH39155.1| FAD dependent oxidoreductase [Escherichia coli FRIK1997]
gi|408110960|gb|EKH42739.1| FAD dependent oxidoreductase [Escherichia coli NE1487]
gi|408117994|gb|EKH49168.1| FAD dependent oxidoreductase [Escherichia coli NE037]
gi|408123819|gb|EKH54548.1| FAD dependent oxidoreductase [Escherichia coli FRIK2001]
gi|408129488|gb|EKH59707.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli PA4]
gi|408140868|gb|EKH70348.1| FAD dependent oxidoreductase [Escherichia coli PA23]
gi|408142981|gb|EKH72325.1| FAD dependent oxidoreductase [Escherichia coli PA49]
gi|408148174|gb|EKH77078.1| FAD dependent oxidoreductase [Escherichia coli PA45]
gi|408156343|gb|EKH84546.1| FAD dependent oxidoreductase [Escherichia coli TT12B]
gi|408163561|gb|EKH91424.1| FAD dependent oxidoreductase [Escherichia coli MA6]
gi|408165568|gb|EKH93245.1| FAD dependent oxidoreductase [Escherichia coli 5905]
gi|408177003|gb|EKI03830.1| FAD dependent oxidoreductase [Escherichia coli CB7326]
gi|408183791|gb|EKI10213.1| FAD dependent oxidoreductase [Escherichia coli EC96038]
gi|408184692|gb|EKI11009.1| FAD dependent oxidoreductase [Escherichia coli 5412]
gi|408220648|gb|EKI44688.1| FAD dependent oxidoreductase [Escherichia coli PA38]
gi|408229987|gb|EKI53410.1| FAD dependent oxidoreductase [Escherichia coli EC1735]
gi|408241502|gb|EKI64148.1| FAD dependent oxidoreductase [Escherichia coli EC1736]
gi|408245425|gb|EKI67813.1| FAD dependent oxidoreductase [Escherichia coli EC1737]
gi|408249890|gb|EKI71799.1| FAD dependent oxidoreductase [Escherichia coli EC1846]
gi|408260265|gb|EKI81394.1| FAD dependent oxidoreductase [Escherichia coli EC1847]
gi|408262388|gb|EKI83337.1| FAD dependent oxidoreductase [Escherichia coli EC1848]
gi|408267905|gb|EKI88341.1| FAD dependent oxidoreductase [Escherichia coli EC1849]
gi|408277819|gb|EKI97599.1| FAD dependent oxidoreductase [Escherichia coli EC1850]
gi|408280111|gb|EKI99691.1| FAD dependent oxidoreductase [Escherichia coli EC1856]
gi|408291725|gb|EKJ10309.1| FAD dependent oxidoreductase [Escherichia coli EC1862]
gi|408310699|gb|EKJ27740.1| FAD dependent oxidoreductase [Escherichia coli EC1868]
gi|408311198|gb|EKJ28208.1| FAD dependent oxidoreductase [Escherichia coli EC1866]
gi|408323439|gb|EKJ39401.1| FAD dependent oxidoreductase [Escherichia coli EC1869]
gi|408328253|gb|EKJ43863.1| FAD dependent oxidoreductase [Escherichia coli NE098]
gi|408328818|gb|EKJ44357.1| FAD dependent oxidoreductase [Escherichia coli EC1870]
gi|408339188|gb|EKJ53800.1| FAD dependent oxidoreductase [Escherichia coli FRIK523]
gi|408348913|gb|EKJ62991.1| FAD dependent oxidoreductase [Escherichia coli 0.1304]
gi|408552046|gb|EKK29278.1| FAD binding domain protein [Escherichia coli 5.2239]
gi|408552822|gb|EKK29985.1| FAD binding domain protein [Escherichia coli 3.4870]
gi|408553365|gb|EKK30486.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli 6.0172]
gi|408574550|gb|EKK50319.1| FAD binding domain protein [Escherichia coli 8.0586]
gi|408582778|gb|EKK57987.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli 10.0833]
gi|408583418|gb|EKK58586.1| FAD binding domain protein [Escherichia coli 8.2524]
gi|408594548|gb|EKK68829.1| FAD binding domain protein [Escherichia coli 10.0869]
gi|408598517|gb|EKK72472.1| FAD binding domain protein [Escherichia coli 88.0221]
gi|408602451|gb|EKK76166.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli 8.0416]
gi|408614044|gb|EKK87328.1| FAD binding domain protein [Escherichia coli 10.0821]
gi|427207830|gb|EKV77992.1| FAD binding domain protein [Escherichia coli 88.1042]
gi|427209570|gb|EKV79600.1| FAD binding domain protein [Escherichia coli 89.0511]
gi|427210917|gb|EKV80763.1| FAD binding domain protein [Escherichia coli 88.1467]
gi|427226507|gb|EKV95096.1| FAD binding domain protein [Escherichia coli 90.0091]
gi|427226812|gb|EKV95396.1| FAD binding domain protein [Escherichia coli 90.2281]
gi|427229796|gb|EKV98098.1| FAD binding domain protein [Escherichia coli 90.0039]
gi|427245103|gb|EKW12405.1| FAD binding domain protein [Escherichia coli 93.0056]
gi|427245862|gb|EKW13137.1| FAD binding domain protein [Escherichia coli 93.0055]
gi|427248077|gb|EKW15122.1| FAD binding domain protein [Escherichia coli 94.0618]
gi|427263810|gb|EKW29561.1| FAD binding domain protein [Escherichia coli 95.0943]
gi|427264661|gb|EKW30332.1| FAD binding domain protein [Escherichia coli 95.0183]
gi|427266539|gb|EKW31972.1| FAD binding domain protein [Escherichia coli 95.1288]
gi|427279145|gb|EKW43596.1| FAD binding domain protein [Escherichia coli 96.0428]
gi|427282885|gb|EKW47126.1| FAD binding domain protein [Escherichia coli 96.0427]
gi|427285444|gb|EKW49428.1| FAD binding domain protein [Escherichia coli 96.0939]
gi|427294494|gb|EKW57673.1| FAD binding domain protein [Escherichia coli 96.0932]
gi|427301665|gb|EKW64520.1| FAD binding domain protein [Escherichia coli 96.0107]
gi|427302107|gb|EKW64943.1| FAD binding domain protein [Escherichia coli 97.0003]
gi|427316266|gb|EKW78226.1| FAD binding domain protein [Escherichia coli 97.1742]
gi|427317969|gb|EKW79853.1| FAD binding domain protein [Escherichia coli 97.0007]
gi|427322624|gb|EKW84253.1| FAD binding domain protein [Escherichia coli 99.0672]
gi|427330397|gb|EKW91668.1| putative electron transfer flavoprotein-quinone oxidoreductase YdiS
[Escherichia coli 99.0678]
gi|427330817|gb|EKW92078.1| FAD binding domain protein [Escherichia coli 99.0713]
gi|429255401|gb|EKY39730.1| FAD binding domain protein [Escherichia coli 96.0109]
gi|429257266|gb|EKY41357.1| FAD binding domain protein [Escherichia coli 97.0010]
gi|444539847|gb|ELV19554.1| FAD binding domain protein [Escherichia coli 99.0814]
gi|444542986|gb|ELV22311.1| FAD binding domain protein [Escherichia coli 09BKT078844]
gi|444548944|gb|ELV27278.1| FAD binding domain protein [Escherichia coli 99.0815]
gi|444559953|gb|ELV37146.1| FAD binding domain protein [Escherichia coli 99.0839]
gi|444561641|gb|ELV38744.1| FAD binding domain protein [Escherichia coli 99.0816]
gi|444566353|gb|ELV43188.1| FAD binding domain protein [Escherichia coli 99.0848]
gi|444575977|gb|ELV52197.1| FAD binding domain protein [Escherichia coli 99.1753]
gi|444579977|gb|ELV55940.1| FAD binding domain protein [Escherichia coli 99.1775]
gi|444581564|gb|ELV57402.1| FAD binding domain protein [Escherichia coli 99.1793]
gi|444595772|gb|ELV70868.1| FAD binding domain protein [Escherichia coli PA11]
gi|444595975|gb|ELV71070.1| FAD binding domain protein [Escherichia coli ATCC 700728]
gi|444598411|gb|ELV73336.1| FAD binding domain protein [Escherichia coli 99.1805]
gi|444609360|gb|ELV83818.1| FAD binding domain protein [Escherichia coli PA13]
gi|444609750|gb|ELV84205.1| FAD binding domain protein [Escherichia coli PA19]
gi|444617812|gb|ELV91919.1| FAD binding domain protein [Escherichia coli PA2]
gi|444626554|gb|ELW00346.1| FAD binding domain protein [Escherichia coli PA48]
gi|444626919|gb|ELW00708.1| FAD binding domain protein [Escherichia coli PA47]
gi|444632238|gb|ELW05814.1| FAD binding domain protein [Escherichia coli PA8]
gi|444641533|gb|ELW14763.1| FAD binding domain protein [Escherichia coli 7.1982]
gi|444644583|gb|ELW17693.1| FAD binding domain protein [Escherichia coli 99.1781]
gi|444647767|gb|ELW20730.1| FAD binding domain protein [Escherichia coli 99.1762]
gi|444656328|gb|ELW28858.1| FAD binding domain protein [Escherichia coli PA35]
gi|444662657|gb|ELW34909.1| FAD binding domain protein [Escherichia coli 3.4880]
gi|444668141|gb|ELW40165.1| FAD binding domain protein [Escherichia coli 95.0083]
gi|444671313|gb|ELW43141.1| FAD binding domain protein [Escherichia coli 99.0670]
Length = 429
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 136/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDILVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V DI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLADIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNDGVMIVGDAAGF 306
>gi|29831378|ref|NP_826012.1| electron transfer oxidoreductase [Streptomyces avermitilis MA-4680]
gi|29608493|dbj|BAC72547.1| putative electron transfer oxidoreductase [Streptomyces avermitilis
MA-4680]
Length = 434
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 157/378 (41%), Gaps = 49/378 (12%)
Query: 42 TSPK-LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCG-GAIPLCMV 98
T P+ L+ V V+G GPAG A LAK G++ L+E+ K CG G P
Sbjct: 2 TEPQPLSEHTADVIVVGAGPAGSTTAYYLAKAGLDVLLLEKTAFPREKVCGDGLTPRATK 61
Query: 99 GEFDLPLDIIDR----KVTKMKMISPS-NVAVDIGQTLKPHEYIGMVR-REVLDAYLRER 152
+ +DI + + +++I + +D +Y G+VR R+ D L +
Sbjct: 62 QLVAMGIDISEEAGWLRNKGLRIIGGGVRLQLDWPDLASFPDY-GLVRKRDDFDEQLARQ 120
Query: 153 AEKNGASVINGLFMKMDLPRNFEQPYVLYYT-EYDGTKGGVG-----EKR--TLEVDAVI 204
A+K GA + N P + T G +G EKR T V+
Sbjct: 121 AQKAGARLYERC--------NVGAPIIDDRTGRITGVHAKLGDADSKEKREVTFHAPLVV 172
Query: 205 GADGANSRVAKSINAG---DYDYAIAFQERVKIPDEKMVYYENLAEMY----VGDDVSPD 257
ADG ++R++ ++ D +A + P + Y E+ E++ G+D
Sbjct: 173 AADGNSTRLSLAMGLHRREDRPMGVAVRTYFTSPRHEDDYLESWLELWDRRGPGEDRLLP 232
Query: 258 FYGWVFPKCDHVA-VGTGTVTHKGDIKKFQLATRNRA------------KDKILGGKIIR 304
YGW+F D + VG G + K+ +A + + G IR
Sbjct: 233 GYGWIFGMGDGTSNVGLGVLNTSDSFKELDWREVLKAWCASMPEDWGYTPENMTG--PIR 290
Query: 305 VEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTR 364
A P+ + +P G + LVGDA G V +GEGI +A +SG++ A+ I++ T
Sbjct: 291 GAALPMAFNRQPHYTRG-LLLVGDAGGLVNPFNGEGIAYAMESGQLAADVIVQAHARATP 349
Query: 365 MIDEGDLRKYLEKWDKTY 382
E L++Y TY
Sbjct: 350 AQREIALQRYPRVLKDTY 367
>gi|417712675|ref|ZP_12361658.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Shigella flexneri K-272]
gi|417717158|ref|ZP_12366076.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Shigella flexneri K-227]
gi|333005942|gb|EGK25458.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Shigella flexneri K-272]
gi|333018812|gb|EGK38105.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Shigella flexneri K-227]
Length = 429
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 136/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG A +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAPLVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNEGVMIVGDAAGF 306
>gi|315926099|ref|ZP_07922299.1| oxidoreductase [Pseudoramibacter alactolyticus ATCC 23263]
gi|315620543|gb|EFV00524.1| oxidoreductase [Pseudoramibacter alactolyticus ATCC 23263]
Length = 365
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 148/337 (43%), Gaps = 48/337 (14%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIE-RKLDNCKPCGGAIP----LCMVG-EFDLPLD 106
+ ++G GPAG A + G++ +I+ + + KPCGG + M G + LP +
Sbjct: 11 IVIVGAGPAGSTFAREIGNRGLKAAIIDGQSVSPNKPCGGLLAPDAQKLMAGYDLVLPKE 70
Query: 107 II-DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
++ D ++ ++ I ++ +I + + + Y+ M R + DAYL + ING
Sbjct: 71 VLADPQIFSVRTI---DLEKNIERFYQRY-YLNMDRHQ-FDAYLLSLVPEE-VERINGRV 124
Query: 166 MKMDLPRNFEQPYVLYYTEYDG-------TKGGVGEKRTLEVDAVIGADGANSRVAKSIN 218
MK+ + Q DG T+GG + TL V+GADGA S V KS
Sbjct: 125 MKITKMKESHQRR----ESDDGRFKFDVITEGG--KAATLTSKYVVGADGAASVVRKSFY 178
Query: 219 AGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTH 278
+A Q+ KI YY + D+ + + W K + G G
Sbjct: 179 KIPILRYMAIQQWFKIDMPPKTYYSCIF-----DEKTSESCSWTIHKNGYFIYG-GCFKP 232
Query: 279 KGDIKKFQLATRNRAKDKILG---GKIIRVEAHPIPEHPRPRRLSGRVA------LVGDA 329
KG F+ T+ + L G+ I EA RPRR+ V L+G+A
Sbjct: 233 KGCRPAFE--TQKKRLSAYLNYDFGEPIMTEACL---ACRPRRMKDFVTGKDGAWLIGEA 287
Query: 330 AGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMI 366
AG+++ S EGI FA KSG M A+A G G+R I
Sbjct: 288 AGFISASSLEGISFAIKSGSMLADAFNRG--KGSREI 322
>gi|194334215|ref|YP_002016075.1| geranylgeranyl reductase [Prosthecochloris aestuarii DSM 271]
gi|194312033|gb|ACF46428.1| geranylgeranyl reductase [Prosthecochloris aestuarii DSM 271]
Length = 398
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 168/378 (44%), Gaps = 67/378 (17%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLC---MVGEFDLPLDIIDR 110
+ G GPAG +AA LA G L+++ + K CG + ++ E + ++++ +
Sbjct: 8 ISGAGPAGCSAALFLAAKGHRVLLLDKARFPRDKTCGDGVTAASSSLLEEIGV-MEVVKQ 66
Query: 111 K------VTKMKMISPSNVAVDIGQTLKPHEYIG---MVRREVLDAYLRE--RAEKNGAS 159
+ + + + SPS V G+ LK + G ++ RE+LD L R +
Sbjct: 67 RLGDRPEIQGVTLSSPSGTVVR-GRLLKVKRFSGGDYVIPREMLDDCLVSCVREHPDVTF 125
Query: 160 VINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINA 219
+ N + + + ++ G +IGADG+ S +A ++
Sbjct: 126 LDNAAVTSITMDGQRARSLSTSRGDFSGR-------------VIIGADGSYSPLASQLHL 172
Query: 220 GDYD-----YAI-AFQERVK-IPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-V 271
+ +AI A+ +V+ + D ++Y+ +G YGW+FP D A V
Sbjct: 173 NNTSKEHQGFAIRAYFSKVEGLTDTIEIHYDR----SIGSG-----YGWIFPLGDKRANV 223
Query: 272 GTGTVTHKGDIKKFQ------LATRNRAKDKILGGKIIR--VEAHPIPEHP-RPRRLSGR 322
G G + + ++ + + T A K+ ++ ++A+P+P R +R G
Sbjct: 224 GVGITSRNMERRRLKRMFEQFIETNPFAVAKLRHARMESGTLKAYPLPLGSFRGKRSRGN 283
Query: 323 VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLR--KYLEK-WD 379
V L GDAA +V +GEGI++A +SGR AEA +R I E + R Y EK W
Sbjct: 284 VLLAGDAASFVDPLTGEGIFYALQSGRYAAEA-------ASRAIGEDETRASAYYEKLWR 336
Query: 380 KTY-WPTYKVLDVLQKVF 396
K + + ++V +LQ +
Sbjct: 337 KEFLFHDFRVGYLLQSLL 354
>gi|432449708|ref|ZP_19691980.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE193]
gi|433033433|ref|ZP_20221165.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE112]
gi|430981284|gb|ELC98012.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE193]
gi|431553423|gb|ELI27349.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE112]
Length = 429
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 135/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEHAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V DI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLADIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNDGVMIVGDAAGF 306
>gi|223477452|ref|YP_002581743.1| geranylgeranyl hydrogenase [Thermococcus sp. AM4]
gi|214032678|gb|EEB73507.1| Geranylgeranyl hydrogenase [Thermococcus sp. AM4]
Length = 370
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 130/315 (41%), Gaps = 46/315 (14%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPLCMVGEFDLPLDIIDRK 111
V +IGGGP G A+ LA + ++ERK K C G I P I
Sbjct: 5 VLIIGGGPVGNYLAKLLAGK-LNVAVVERKRSFGGKACTGIIGRESFERLGFPEKAI--- 60
Query: 112 VTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLP 171
V ++ + + D + K + +V R+ L+ L E A K GA G
Sbjct: 61 VNSLRGATFRSRIRDFEISRKDAQAY-VVDRKTLERKLAEDAVKRGADYFVG-------- 111
Query: 172 RNFEQPYVLYYTEYDGTKGGVGE----KRTLEV--DAVIGADGANSRVAKSINA-GDYDY 224
T + G +GG K T EV D +GADG S VA+ I A ++
Sbjct: 112 -----------TTFVGFRGGRARLQHLKETFEVSADVYVGADGVASTVAREIGAKSSAEF 160
Query: 225 AIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKGDIK 283
F+ V++ E + + E++V +++P+F+ WV P D VA VGT G ++
Sbjct: 161 LKGFE--VEVLGE---FRRDFVEVWVDKELNPEFFYWVAPLSDDVARVGT-----FGSLE 210
Query: 284 KFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYF 343
R R I+ +A + R + G VALVGDAA + + GI F
Sbjct: 211 ALNRFLRVRGLKPT---AILEFKAGTVGLGWRRPWIRGNVALVGDAALQIKPTTAGGIVF 267
Query: 344 AAKSGRMCAEAIIEG 358
A A AI+ G
Sbjct: 268 GAICAHHLARAILTG 282
>gi|347754062|ref|YP_004861626.1| dehydrogenase [Candidatus Chloracidobacterium thermophilum B]
gi|347586580|gb|AEP11110.1| Dehydrogenases (flavoproteins) [Candidatus Chloracidobacterium
thermophilum B]
Length = 397
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 139/357 (38%), Gaps = 55/357 (15%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC-KPCGGAIPLCMVGEFDLPLDII 108
VA++G GPAG A LA+ G L + KPCGG + + +F
Sbjct: 2 TFNVAIVGAGPAGSMLAHNLAQAGARVRLYDAHGGPWEKPCGGGLTAKALRQFGFLTGQA 61
Query: 109 DR----KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
DR + ++++IS +V P + + R L+ L RA + GA I
Sbjct: 62 DRFPRQDIQEIEIISAGGRSVTFPLGDAPFQ---IFSRRNLNGLLLARATEAGADFIP-- 116
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDY 224
+++ N + + E + + D V+GADG S V + +
Sbjct: 117 -LRVT---NLRREVHTWQVE--------SGRDCWKADFVVGADGCTSFVRRVLG------ 158
Query: 225 AIAFQERVKIPDEKMV--YYENLAEMYVGDDVSPDF---YGWVFPKCDHVAVGTGTVTHK 279
R+ D+ M YY A + P Y W FP+ DH++ G +
Sbjct: 159 -----RRLPDADQAMCCGYYVPAAGVPRAVVAFPRHFTGYVWAFPRPDHISYGIINQCGE 213
Query: 280 GDIKKF--QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRV--------ALVGDA 329
+ K +L R + G++ R P RR S + ALVGDA
Sbjct: 214 YPLPKLWEELDAFVRWHRQ---GELPRERVRYAARVPMLRRASWKTNRVVGDGWALVGDA 270
Query: 330 AGYVTKCSGEGIYFAAKSGRMCAEAIIEGS----ENGTRMIDEGDLRKYLEKWDKTY 382
AG+V +GEGI++A S + +++I G E R E DL + + K Y
Sbjct: 271 AGFVDPITGEGIFYALHSAELLGQSLIAGEAMSYEQRWRKAFEADLTEASRRLPKFY 327
>gi|419804403|ref|ZP_14329561.1| FixC-like protein [Escherichia coli AI27]
gi|384472588|gb|EIE56641.1| FixC-like protein [Escherichia coli AI27]
Length = 429
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 134/310 (43%), Gaps = 45/310 (14%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP----LDIID 109
V+G G AG AA +A+ G++ +IER CK G E +P ++
Sbjct: 10 VVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVE 69
Query: 110 RKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
RKV + K + S V +D Q P V R LD +L E+AE+ GA I G+
Sbjct: 70 RKVAREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGV 129
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN---AGD 221
++D V + G + G L+ + V+ ADG NS + +S+ A D
Sbjct: 130 --RVD-------ALVREGNKVTGVQAG---DDILQANVVVLADGVNSMLGRSLGMVPASD 177
Query: 222 -YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTG 274
+ YA+ +E + + E+ + E A ++ G S G F ++ +V G
Sbjct: 178 PHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLYTNNDSVSLG 236
Query: 275 TVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR---PRRLSGR 322
V GDI Q + +D I GGK++ AH +PE P+ ++
Sbjct: 237 LVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNDG 296
Query: 323 VALVGDAAGY 332
V +VGDAAG+
Sbjct: 297 VMIVGDAAGF 306
>gi|374628577|ref|ZP_09700962.1| geranylgeranyl reductase [Methanoplanus limicola DSM 2279]
gi|373906690|gb|EHQ34794.1| geranylgeranyl reductase [Methanoplanus limicola DSM 2279]
Length = 382
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 136/346 (39%), Gaps = 35/346 (10%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDIIDR 110
V V+GGGP G AAA A++G++ ++E P C G + E + + +
Sbjct: 4 VIVVGGGPCGSAAARFCAESGLKVLVLEEHASIGYPVQCAGLLSCNAFDECRVTERSVFQ 63
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V+ K+IS ++ + K Y+ V R LD R A+ F
Sbjct: 64 EVSGAKIISSGGSVLEF-DSGKTKAYV--VDRAALD-----REMAENAANAGAEFRLKSY 115
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIA-FQ 229
E V +G G + + +I ADG S +++ + ++ Q
Sbjct: 116 VCGAENGRVF-------VRGQSG-REEIPAKMIIAADGPRSVLSRCYGLKRQEMILSGAQ 167
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLAT 289
V P + NL E+Y G S DF+GWV P G G G +
Sbjct: 168 AEVSFPG-----FHNLVEIYPG--ASEDFFGWVIP------AGEGR-ARVGLCGGENVPQ 213
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R K G + + + IP P+ R VGDAAG+ SG GIY +S
Sbjct: 214 RFSEFLKRFGSGNVHLVSGTIPLGVMPKTYHDRTLFVGDAAGFAKPTSGGGIYTGVRSAF 273
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKV 395
+E +E E + + DL++Y +W + K+ ++ K+
Sbjct: 274 HASETALECIEKDS--FSDSDLKRYEGRWKADFGRELKIGMMMYKM 317
>gi|408382193|ref|ZP_11179739.1| digeranylgeranylglycerophospholipid reductase [Methanobacterium
formicicum DSM 3637]
gi|407815200|gb|EKF85820.1| digeranylgeranylglycerophospholipid reductase [Methanobacterium
formicicum DSM 3637]
Length = 385
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 147/359 (40%), Gaps = 44/359 (12%)
Query: 54 AVIGGGPAGGAAAETLA-KNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDL--PLDII 108
AV+ GG GG+ A A KNG++ +IE+ + P C A ++ +
Sbjct: 8 AVVVGGRIGGSTASLFASKNGLDVLMIEKNQEIGTPVQCAEATSSSTFKTLEMEPSSKYV 67
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
++ + +P G + ++ R++ D L + K G ++ +K
Sbjct: 68 CNEIKGADIYAPDGTH---GHLEGGYAEGFILERKLFDKQLAIESAKAGTDIMVKTTVKD 124
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
+ RN + V+ +G +E D VI ADG SR++K + +
Sbjct: 125 LIRRNGQICGVVAKH--------MGHTIEVEADLVIAADGIESRISKMAGLKTHQ---SP 173
Query: 229 QERVKIPDEKMVYYE---NLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTG----TVTHKG 280
Q +MV E + + Y G+ ++P Y W+FPK D +A VG G T T
Sbjct: 174 QSLCSCAQYEMVGVECDPHYLQFYFGEKIAPGGYVWIFPKGDGIANVGVGVRSDTETAYS 233
Query: 281 DIKKFQLATRNRAKDKILGGKIIRVEAHPIPEH-PRPRRLSGRVALVGDAAGYVTKCSGE 339
+KKF + +GG +P + P + + + +VGDAAG V +G
Sbjct: 234 FLKKFTSTMDATPVELNMGG---------VPVYGPVKKTYTDSLMVVGDAAGQVEPFTGG 284
Query: 340 GIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398
GI+ A+ R+ E E E E +L+K++K W D+ Q + YR
Sbjct: 285 GIHVTAQCARIAGEVAAEAIEK------ENTSGNFLKKYEK-LWQKEVGKDLKQSLKYR 336
>gi|415815809|ref|ZP_11507240.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
domain protein [Escherichia coli LT-68]
gi|323170014|gb|EFZ55670.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
domain protein [Escherichia coli LT-68]
Length = 341
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 137/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G L+ + V+ ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILQANVVVLADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNEGVMIVGDAAGF 306
>gi|422832825|ref|ZP_16880893.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli E101]
gi|371610841|gb|EHN99368.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Escherichia coli E101]
Length = 429
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 136/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEEIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V DI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLADIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 IVPQLVNDGVMIVGDAAGF 306
>gi|419345254|ref|ZP_13886634.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC13A]
gi|419349670|ref|ZP_13891021.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC13B]
gi|419355011|ref|ZP_13896279.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC13C]
gi|419360150|ref|ZP_13901371.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC13D]
gi|419365235|ref|ZP_13906403.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC13E]
gi|378188289|gb|EHX48895.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC13A]
gi|378203048|gb|EHX63473.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC13B]
gi|378203450|gb|EHX63873.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC13C]
gi|378205080|gb|EHX65495.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC13D]
gi|378215158|gb|EHX75458.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC13E]
Length = 429
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 133/310 (42%), Gaps = 45/310 (14%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP----LDIID 109
V+G G AG AA +A+ G++ +IER CK G E +P ++
Sbjct: 10 VVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVE 69
Query: 110 RKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
RKVT+ K + S V +D Q P V R LD +L E+AE+ GA G+
Sbjct: 70 RKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFSPGV 129
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN---AGD 221
++D V + G + G LE + VI ADG NS + +S+ A D
Sbjct: 130 --RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGRSLGMVPASD 177
Query: 222 -YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTG 274
+ YA+ +E + + E+ + E A ++ G S G F + ++ G
Sbjct: 178 PHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLYTNKDSISLG 236
Query: 275 TVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR---PRRLSGR 322
V GDI Q + +D I GGK++ AH +PE P+ ++
Sbjct: 237 LVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNDG 296
Query: 323 VALVGDAAGY 332
V +VGDAAG+
Sbjct: 297 VMIVGDAAGF 306
>gi|226311318|ref|YP_002771212.1| electron transfer flavoprotein-quinone oxidoreductase
[Brevibacillus brevis NBRC 100599]
gi|226094266|dbj|BAH42708.1| electron transfer flavoprotein-quinone oxidoreductase
[Brevibacillus brevis NBRC 100599]
Length = 431
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 154/356 (43%), Gaps = 58/356 (16%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPL-----CMVGEF--DLP 104
V ++G GPAG A A TLAK GV L+ER + K G + ++ EF + P
Sbjct: 7 VIIVGAGPAGTACAYTLAKAGVNVLLMERGEYPGSKNVMGGVLYRKTMEDIIPEFYKEAP 66
Query: 105 LD--IIDRKVTKMKMISPSNVAVD-IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVI 161
++ I++++ + S N + + +P+ ++R + D + ++A + GA ++
Sbjct: 67 VERPIVEQRFMMLDRESAINFSYKGMEWAQEPYNNFTVLRAK-FDQWFADKAVQQGALLL 125
Query: 162 NGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKR---TLEVDAVIGADGANSRVAKSIN 218
N + L +G GV R L D V+ ADG NS +AKS+
Sbjct: 126 N-------------ETVALQCIVENGKVVGVKTDRPDGDLYADVVVLADGVNSLLAKSLG 172
Query: 219 AGDY----DYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYG----------WVFP 264
+ A+A E +K+ D K++ E+ + + + +G W++
Sbjct: 173 FHKEFRPDEVALAVMEVLKL-DRKII--EDRFNLEGDHGCTIEIFGDSTKGILGTAWLYT 229
Query: 265 KCDHVAVGTGTVTH---KGDIKKFQLA--TRNR--AKDKILGGKIIRVEAHPIPE---HP 314
D + +G GT+ K IK ++L +N + I G + AH IPE
Sbjct: 230 NKDSLNIGVGTMLSGLIKNKIKPYELLDYVKNHPMIRPYIQGCEQQEYLAHLIPEGGYRS 289
Query: 315 RPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENG---TRMID 367
P+ + V +VGDAA V EG A SG M AE I+ E G +M+D
Sbjct: 290 IPKIVGNGVLVVGDAAQLVNAIHREGSNMAMASGVMAAETILAAKEAGDYSEKMLD 345
>gi|126466350|ref|YP_001041459.1| geranylgeranyl reductase [Staphylothermus marinus F1]
gi|126015173|gb|ABN70551.1| geranylgeranyl reductase [Staphylothermus marinus F1]
Length = 458
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 177/437 (40%), Gaps = 67/437 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDN---CKPCGGAIPLCMVGEFDL--PLDI 107
V V+G G AG AA LA G +IE K + K CG AI + E P +
Sbjct: 5 VIVVGAGVAGLNAAFVLASKGFNVAIIESKPRSRIGDKTCGDAIGVHHFKELGWYPPEET 64
Query: 108 IDRKVTKMKMISPSNVAVDI--GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
ID + +K+ SPS I G+ + V R +L +RAE NGA +++
Sbjct: 65 IDHRYKGVKIYSPSEKYSIIVSGEGVS-------VNRLKFGQWLLKRAEDNGAVLLDKHV 117
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS------INA 219
+ L F + + K G+ E L DA I GA + I+
Sbjct: 118 L---LGVKFNDNGIQSIKVKELGKPGLKE---LVADAFIDTSGAKPALRSKLPLEWPISE 171
Query: 220 GDY--DYAIAFQERVKIP----DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDH---VA 270
Y DY IA++E ++I DE + Y A +Y+ ++P Y W FPK V
Sbjct: 172 RPYMTDYNIAYREVLEINEPVNDEDVDY----AVIYLNTIIAPGGYWWFFPKNPSGKIVN 227
Query: 271 VGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIP-EHPRPRRLSGRVALVGDA 329
VG G V D N+ GK++ +P P P + V + GDA
Sbjct: 228 VGLGVVWGVDDYNPRH--NYNKYLKPRFKGKLLHAGGGMVPTRRPLPTLVWRNVGVAGDA 285
Query: 330 AGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVL 389
A V G GI + ++ + A+ I + E G ++DE + +++ + Y L
Sbjct: 286 AYTVNPVHGGGIGSSLQASAIVAKYIGDALEKG--IVDETTTWQANKEYMQAYGAKQAAL 343
Query: 390 DVLQKVFYRSNPAREAFVEMCADEYVQKMT---FDSYLYKRVVPGNPLEDLKLAVNTIGS 446
D+L+ Y+QK++ F+ + ++V G + DL I
Sbjct: 344 DILRM-------------------YLQKLSNEEFEWIMKNKIVDGKSIYDLGTHARLIEE 384
Query: 447 LVRA-NALRREMDKLTI 462
+V +++ R + K T+
Sbjct: 385 VVHGISSMLRLLSKPTL 401
>gi|158338604|ref|YP_001519781.1| geranylgeranyl reductase [Acaryochloris marina MBIC11017]
gi|158308845|gb|ABW30462.1| geranylgeranyl reductase family protein [Acaryochloris marina
MBIC11017]
Length = 376
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 140/346 (40%), Gaps = 54/346 (15%)
Query: 69 LAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLD-IIDRKVTKMKMISPSNVAVD 126
LAK G ++E++ L KPCGG + + FD I KV ++ N+
Sbjct: 20 LAKKGRSVLVLEKETLPRYKPCGGGVSPVVADWFDFDFSPAISLKVKTVRYT--WNMEDV 77
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGA-----SVINGLFMKMDLPRNFEQPYVLY 181
+ L+ E I MVRR+V D +L ++A+K GA + + G+ + D
Sbjct: 78 VLADLQTPEPIWMVRRDVFDHFLIQQAQKQGAELRDDTAVTGIEFQSD------------ 125
Query: 182 YTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVK-----IPD 236
+ + + G V K +I ADGA +A+ + F+ER + +
Sbjct: 126 HWQVNTADGPVSGKY------LIAADGAKGPMAR---------WLGFKERKRQLGGALEA 170
Query: 237 EKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDK 296
E M EN ++ + + Y W FPK D ++G G G+ + + +K
Sbjct: 171 EAMTEIENPDTVHFEFGLVKNGYIWNFPKADGYSIGIGAF-RGGERQDLRAIVTEYSKMF 229
Query: 297 ILGGKIIRVEAHPIPEHPRPRRLSGRVA-LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
+ IR HP+ + L + A L G+AA V + EGI + SG +EAI
Sbjct: 230 GVDFTSIRQHGHPLCLWNGDQTLHTQQAILAGEAACVVDPFTAEGIRPSMFSGLKASEAI 289
Query: 356 ---IEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398
+ G N L KY E + K L VFYR
Sbjct: 290 DHALSGQNNA--------LEKYSEVMATEWGGEMKWAQRLASVFYR 327
>gi|126727927|ref|ZP_01743753.1| Geranylgeranyl reductase [Rhodobacterales bacterium HTCC2150]
gi|126702787|gb|EBA01894.1| Geranylgeranyl reductase [Rhodobacterales bacterium HTCC2150]
Length = 394
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 100/232 (43%), Gaps = 21/232 (9%)
Query: 197 TLEVDAVIGADGANSRVAKSINAGDYD-YAIAFQERVKIPDEKMVYYENLAEMYVGDDVS 255
+L +IG DG NS VAKS+ +D I F V++P E E E+ D +
Sbjct: 144 SLSYKVLIGCDGVNSFVAKSLFGSSFDPTKIGFGLEVEVPIEAEKSPEQTVEV---DFSA 200
Query: 256 PDF-YGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHP 314
D+ YGW FPK +G G + + K +LA + ++V+ +P
Sbjct: 201 ADWGYGWSFPKHKSTTIGLGGINVENPKMKQRLA---EFLTRYPNSTDLKVKGQYLP-FG 256
Query: 315 RPRRLSGR--VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLR 372
R+ G+ + L GDAAG V +GEGI A SG + A A + I +
Sbjct: 257 DFRKSPGKANILLAGDAAGLVDPVTGEGIALAMHSGELAALA-------ASDAIKSNAPQ 309
Query: 373 KYLEKWDKTYWPTYKVLDV--LQKVFYRSNPAREAFVEMCAD-EYVQKMTFD 421
K L ++ K PT++ L L ++ P R F A+ +Q M D
Sbjct: 310 KALRRYKKALRPTHQSLRQAKLWRLMMFPKPMRSVFQNALANGSSLQNMYLD 361
>gi|152964617|ref|YP_001360401.1| geranylgeranyl reductase [Kineococcus radiotolerans SRS30216]
gi|151359134|gb|ABS02137.1| geranylgeranyl reductase [Kineococcus radiotolerans SRS30216]
Length = 430
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 138/335 (41%), Gaps = 36/335 (10%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDL-----PLD 106
V V+G GPAG A LA G ++E+ K CG + V E DL P +
Sbjct: 10 VLVVGAGPAGSTLARHLATAGHRVLVLEKSSFPREKVCGDGLTPRAVHELDLLGLKTPAE 69
Query: 107 IIDRKVTKMKMISPSNVAVDI-GQTLKPHEYIGMVR-REVLDAYLRERAEKNGASVINGL 164
+ ++++ V + + + + G+V R D L E A + GA+V+
Sbjct: 70 DGWARNRGLRLLG-GGVRLQVPWPEISDYPGHGLVHTRSRFDQALAEHAREGGATVLERT 128
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGG--VGEKRTLEVDAVIGADGANSRVAKSINAG-- 220
+ + + +V+ T + G GE T V+ ADG R+A S+
Sbjct: 129 SVTGPV-LDERTGHVVGVTARPVDEKGRKAGEGTTYRAPVVVAADGVGGRLALSMGLAKR 187
Query: 221 -DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDF---YGWVFPKCDHVA------ 270
D IA + P + E E+ GD S YGWVF D +
Sbjct: 188 EDRPLGIAVRTYFTSPRHDDDWMEAWMELREGDSSSGPLLPGYGWVFGVGDGTSNVGLGV 247
Query: 271 ----VGTGTVTHKGDIKKFQLAT----RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR 322
G+G V ++ ++++ A R R +D++ IR A P+ + P G
Sbjct: 248 LDPGAGSGDVDYRDLLRRWTAAMPPEWRFREEDQV---GPIRGAALPMAFNRTPHYTRGL 304
Query: 323 VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIE 357
V LVGDA G V +GEGI +A +S R A A+ E
Sbjct: 305 V-LVGDAGGMVNPFNGEGIAYAMQSARFAARAVDE 338
>gi|383789078|ref|YP_005473647.1| oxidoreductase [Caldisericum exile AZM16c01]
gi|381364715|dbj|BAL81544.1| oxidoreductase [Caldisericum exile AZM16c01]
Length = 389
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 135/341 (39%), Gaps = 44/341 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDIIDR 110
V VIGGGP G A LAK G+ ++E K P C G +P+ + +L +I
Sbjct: 6 VIVIGGGPIGCNVANNLAKEGISVAVLEAKTKIGFPNHCSGLVPMEFIELTNLDNSLILN 65
Query: 111 KVTKMKMIS--PSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
+ ++ S SN Q + Y ++ R D + RA+++GA ++
Sbjct: 66 YIKGAEVFSYKESNF-----QFKRDTPYAAVIDRSNFDILMERRAKESGAKFFYNAHIES 120
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINA---GDYDYA 225
+N E L T G + ++ A G+ S + K +N G Y
Sbjct: 121 IEIKNGESNITL-------TNG-----KIFSTKVIVVATGSTSAIQKMLNIEINGSTIYT 168
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKGDIKK 284
+ + + D ++ + +Y+ + V+ +++ W P + A VG G + + K
Sbjct: 169 VQIDVEIPLKDTEIAF------IYMNNQVAHNWFAWAIPTNQNNARVGFGEDIGRNLLDK 222
Query: 285 FQLATRNR---AKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGI 341
+ + KI G ++ IP+ + + VGDAA V SG G+
Sbjct: 223 LDFLFKTWGVLSSAKITGKPVVWSIPIGIPKKTAFK----NILFVGDAARQVKPFSGGGL 278
Query: 342 YFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTY 382
+G + +E +I + D + K LE +D +
Sbjct: 279 LTGFIAGNILSETVIAAFK------DSANFYKILETYDNRW 313
>gi|318079586|ref|ZP_07986918.1| hydrogenase [Streptomyces sp. SA3_actF]
Length = 408
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 121/309 (39%), Gaps = 49/309 (15%)
Query: 72 NGVETFLIER-KLDNCKPCGGAI--PL--CMVGEFDLPLDIIDRKVTKMKMISPSNVAVD 126
G L+E+ +L K CGG I P + FDLPL DR + ++D
Sbjct: 23 TGRRVLLLEKAELPRYKTCGGGIIGPSRDSLPPGFDLPLQ--DR-------VHAVTFSLD 73
Query: 127 --IGQTLKP-HEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM------DLPRNFEQP 177
+T K H G+V R D L E A + GA + G ++ +P
Sbjct: 74 GKYQRTRKARHMLFGLVNRPEFDLGLVEAAREAGAELRTGAVVQRVEQHGPAVPDRRTVA 133
Query: 178 YVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
VL E TL AV+GADG+ R+ + + + + +P+
Sbjct: 134 LVLQGGE------------TLLARAVVGADGSAGRIGAHVGVKLDQVDLGLELEIPVPET 181
Query: 238 KMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLAT------RN 291
++ + G P YGWVFPK D + VG + +G K L
Sbjct: 182 VAADWKGRVHIDWGP--LPGSYGWVFPKGDTLTVGVISARGEGAATKRYLEDFVGRLGLA 239
Query: 292 RAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMC 351
+ K+ G + R P GRV + GDAAG + + EGI FA +SGR+
Sbjct: 240 GFEPKVSSGHLTRCRTEDSPLS------RGRVLVAGDAAGLLEPWTREGISFALRSGRLA 293
Query: 352 AEAIIEGSE 360
E + SE
Sbjct: 294 GEWAVRVSE 302
>gi|419114833|ref|ZP_13659855.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC5A]
gi|377962038|gb|EHV25501.1| putative anaerobic carnitine metabolism flavoprotein [Escherichia
coli DEC5A]
Length = 429
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 136/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARVGLDILVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V DI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLADIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNDGVMIVGDAAGF 306
>gi|326439543|ref|ZP_08214277.1| putative FAD-dependent oxidoreductase [Streptomyces clavuligerus
ATCC 27064]
Length = 427
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 131/310 (42%), Gaps = 57/310 (18%)
Query: 75 ETFLIER-KLDNCKPCGGAI--PL--CMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129
+ L+E+ +L K CGG I P + FDLPL VT + + +
Sbjct: 61 QVLLLEKAELPRYKTCGGGIIGPTRDSLPPGFDLPLRDRVHAVT-------FTLNGRLSR 113
Query: 130 TLKPHEYI-GMVRREVLDAYLRERAEKNGASVINGLFM---KMDLPRNFEQPYVLYYTEY 185
T + + + G+V R DA L E A+K GA + G+ + + P ++ V T
Sbjct: 114 TRRSRKMLFGLVNRPEFDAQLVEHAQKAGAVLRTGVTVSRVEQHGPAVPDRRTVAVVTS- 172
Query: 186 DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENL 245
DG T+ AV+GADG+ SR+ + + + + +P E +
Sbjct: 173 DG--------ETVLARAVVGADGSASRIGAHVGVKLDQVDLGLEAEIPVP-------EPV 217
Query: 246 AEMYVGDDV-----SPDFYGWVFPKCDHVAVGTGTVTHKGD---------IKKFQLATRN 291
AE + G + P YGWVFPK + VG + +G I + LA
Sbjct: 218 AEDWAGRVLIDWGPMPGSYGWVFPKGRTLTVGVISARGEGAATKRYLEDFIARLGLAGFE 277
Query: 292 RAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSGEGIYFAAKSGRM 350
A I G + R + P LS GRV + GDAAG + + EGI FA +SGR+
Sbjct: 278 PA---ISSGHLTRCRSDDSP-------LSRGRVLVCGDAAGLLEPWTREGISFALRSGRL 327
Query: 351 CAEAIIEGSE 360
E + SE
Sbjct: 328 AGEWAVRISE 337
>gi|147676353|ref|YP_001210568.1| dehydrogenases [Pelotomaculum thermopropionicum SI]
gi|146272450|dbj|BAF58199.1| dehydrogenases [Pelotomaculum thermopropionicum SI]
Length = 432
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 165/386 (42%), Gaps = 64/386 (16%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-------KLDNCKPCGGAIPLCMVGEF-DLPLD 106
V+G GPAG AA +AK G+E LIE+ + + A+ + G + + P++
Sbjct: 9 VVGAGPAGSTAAYLMAKAGLEVLLIEKGAAPGSKNMFGGRMYSHALNQVIPGFWAEAPVE 68
Query: 107 --IIDRKVTKMKMISPSNVAV-DIGQTLKPHEY--IGMVRREVLDAYLRERAEKNGASVI 161
+ +T M ++++ D+ T P+ Y ++R E DA+L +AE+ GA +
Sbjct: 69 RPVAKEIITLMTGDQCLSISIQDLSWTKPPYHYHSFTLLRAE-FDAWLAAKAEEAGAMLA 127
Query: 162 NGLFMKMDLPRNFEQPYVLYYTEYDGTKGGV--GEKRTLEVDAVIGADGANSRVAKSINA 219
G+ + L + DG G+ GE L D VI ADG NS +A+
Sbjct: 128 CGIRVDDLLIK-------------DGRVVGIRAGEDEML-ADVVIAADGVNSLMAQKAGL 173
Query: 220 GDY----DYAIAFQERVKIPDEKMVYYENL------AEMYVGDDVSPDFYGWVFPKCDHV 269
A ++ +K+ E++ L A+++VG+ + G F +
Sbjct: 174 ARMFSPGQVATGVKQVIKLSPEEISRRFQLEGNNGAAQLFVGE-CTKGMQGGGFIYTNKD 232
Query: 270 AVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHP---RPR 317
+ G V +++K Q + ++ + GG+++ AH +PE P+
Sbjct: 233 TISLGLVIKAAELQKTQHKIADLVEEFKHNPHIRPLVEGGEVVEYSAHLVPEAGLDMMPQ 292
Query: 318 RLSGRVALVGDAAGYVTKCS--GEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYL 375
+ + GDAAG+V G+ FA SG+ A+ +IE + N R+ L
Sbjct: 293 LYGDGILVAGDAAGFVLNLGYIVRGMDFAIASGQAAAQTVIEAARNNNFS------RQSL 346
Query: 376 EKWDKTYWPTYKVLDVLQKVFYRSNP 401
++ K ++ + D+ FYR P
Sbjct: 347 SQYAKLLKESFVLRDL---EFYRKAP 369
>gi|386875580|ref|ZP_10117742.1| geranylgeranyl reductase family protein [Candidatus Nitrosopumilus
salaria BD31]
gi|386806680|gb|EIJ66137.1| geranylgeranyl reductase family protein [Candidatus Nitrosopumilus
salaria BD31]
Length = 405
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 150/351 (42%), Gaps = 53/351 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
+ ++G GPAG +AA AKNGV+ L+E++ + G + + EF +P D +
Sbjct: 9 LVIVGAGPAGSSAALAAAKNGVKVALLEKENSIAETVRTSGVTWIQNIKEFGIPDDCYN- 67
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDA-----YLRERAEKNGASVINGLF 165
+ K SP+N V I ++ R VLD +L AEK GA + F
Sbjct: 68 PIRKFSFCSPNN-EVTISDSV--------ARAAVLDVRKTYRWLAHEAEKAGADI----F 114
Query: 166 MKM---DLPRNFEQPYVLYYTEYDGTKG-GVGEKRTLEVDAVIGADGANSRVAKSI---- 217
+KM D+ +N V G +G G K T VI A G S V+K++
Sbjct: 115 VKMNVNDVIKNETGDIV-------GVRGTGPKGKTTFHSKMVIDASGFTSSVSKAMGFVT 167
Query: 218 NAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTV 276
+ ++ +V+ D + + VG+ SP Y W+FP +++ +G G
Sbjct: 168 QWKRFGAGAEYEVKVEKVDSDTWW------LMVGEQYSPAGYAWIFPLGNNIVRIGVGVG 221
Query: 277 THKGDIKKFQ----LATRNRAKDKILGGKIIRVEAH--PIPEHPRPRR-LSGRVALVGDA 329
+ ++ Q L K L GKI +E H IP R+ + + LVGD+
Sbjct: 222 KPESNVDPTQRLKELMEEKTGPIKKL-GKITPIEFHYGLIPNDGLSRKTVFNNLILVGDS 280
Query: 330 AGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDK 380
AG EGI +A K GR+ + + ++G DE L Y W K
Sbjct: 281 AGQANPLVLEGIRYAIKYGRVAGKVSSDAIKSGN--TDEKSLFPYEATWRK 329
>gi|254393292|ref|ZP_05008442.1| hydrogenase [Streptomyces clavuligerus ATCC 27064]
gi|294811115|ref|ZP_06769758.1| Hydrogenase [Streptomyces clavuligerus ATCC 27064]
gi|197706929|gb|EDY52741.1| hydrogenase [Streptomyces clavuligerus ATCC 27064]
gi|294323714|gb|EFG05357.1| Hydrogenase [Streptomyces clavuligerus ATCC 27064]
Length = 424
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 131/310 (42%), Gaps = 57/310 (18%)
Query: 75 ETFLIER-KLDNCKPCGGAI--PL--CMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129
+ L+E+ +L K CGG I P + FDLPL VT + + +
Sbjct: 58 QVLLLEKAELPRYKTCGGGIIGPTRDSLPPGFDLPLRDRVHAVT-------FTLNGRLSR 110
Query: 130 TLKPHEYI-GMVRREVLDAYLRERAEKNGASVINGLFM---KMDLPRNFEQPYVLYYTEY 185
T + + + G+V R DA L E A+K GA + G+ + + P ++ V T
Sbjct: 111 TRRSRKMLFGLVNRPEFDAQLVEHAQKAGAVLRTGVTVSRVEQHGPAVPDRRTVAVVTS- 169
Query: 186 DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENL 245
DG T+ AV+GADG+ SR+ + + + + +P E +
Sbjct: 170 DG--------ETVLARAVVGADGSASRIGAHVGVKLDQVDLGLEAEIPVP-------EPV 214
Query: 246 AEMYVGDDV-----SPDFYGWVFPKCDHVAVGTGTVTHKGD---------IKKFQLATRN 291
AE + G + P YGWVFPK + VG + +G I + LA
Sbjct: 215 AEDWAGRVLIDWGPMPGSYGWVFPKGRTLTVGVISARGEGAATKRYLEDFIARLGLAGFE 274
Query: 292 RAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSGEGIYFAAKSGRM 350
A I G + R + P LS GRV + GDAAG + + EGI FA +SGR+
Sbjct: 275 PA---ISSGHLTRCRSDDSP-------LSRGRVLVCGDAAGLLEPWTREGISFALRSGRL 324
Query: 351 CAEAIIEGSE 360
E + SE
Sbjct: 325 AGEWAVRISE 334
>gi|440680126|ref|YP_007154921.1| geranylgeranyl reductase [Anabaena cylindrica PCC 7122]
gi|428677245|gb|AFZ56011.1| geranylgeranyl reductase [Anabaena cylindrica PCC 7122]
Length = 373
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 139/338 (41%), Gaps = 38/338 (11%)
Query: 69 LAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLD-IIDRKVTKMKMISPSNVAVD 126
LAK G ++E++ L KPCGG + + FD I KV ++ V+
Sbjct: 20 LAKRGRSVLVLEKESLPRYKPCGGGVSPAIAQWFDFDFSPAISVKVDSLRFTWKLEDPVE 79
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----INGLFMKMDLPRNFEQPYVLY 181
+K E + MVRR++ D +L ++A+ GA + + G+ K D
Sbjct: 80 AKIGIK--EPVWMVRRDIFDHFLVQQAQNQGAEIRDNTEVKGIEFKND------------ 125
Query: 182 YTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVY 241
+ + + G + + +I ADGA +AK + D +A ++ E V
Sbjct: 126 HWQVNTANGPITGRY------LIAADGAKGSMAKWLGFKDRKRRLAGALEAEVAAE--VV 177
Query: 242 YENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGK 301
+N+A G + + Y W FPK D ++G GT G+ + F+ AK + K
Sbjct: 178 NKNMAHFEFG--LLKNGYIWNFPKADGYSIGVGTFI-GGEPQDFKKILDEYAKSFNVDVK 234
Query: 302 IIRVEAHPIPEHPRPRRLSGRVA-LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
+ HPI ++L + A L G+AA V + EGI + SG + A+ I E
Sbjct: 235 TSKQYGHPICLWDGNQKLHTQNAVLAGEAACVVDPFTAEGIRPSIFSGVLAAQFINEALA 294
Query: 361 NGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398
D L Y E ++ + L FYR
Sbjct: 295 G-----DINALANYTEAINEQWGTDMAWAQKLAGAFYR 327
>gi|288931810|ref|YP_003435870.1| geranylgeranyl reductase [Ferroglobus placidus DSM 10642]
gi|288894058|gb|ADC65595.1| geranylgeranyl reductase [Ferroglobus placidus DSM 10642]
Length = 375
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 101 FDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV 160
F++P + MK + P+ +D+ + ++RR D +R AE +G +
Sbjct: 63 FEIPKKFESNRTRWMKFVLPNGREIDVEFEMH------VIRR---DEMIRTLAENSGHRL 113
Query: 161 INGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAG 220
I G + F+ +DG + E R LE +IG+DGANSR+ + +
Sbjct: 114 ILG--------KTFD---------FDGDI--IVEGRRLESKVIIGSDGANSRIRRRLGL- 153
Query: 221 DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTG---TV 276
++ + A Q V+ + + E+ MYVG ++ Y W+ PK D VA VGTG
Sbjct: 154 KFEISPAKQYVVRGFEGE----EDTIYMYVGKKIAAGGYAWIIPKGDSVANVGTGFRAEY 209
Query: 277 THKGD---------IKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVG 327
KGD ++++ ++R K +II+ +P + + G+V L G
Sbjct: 210 AEKGDNIHKALDRFLREYPYSSRMLKK-----AEIIQKIGAVVPIDLPVKSVHGKVILSG 264
Query: 328 DAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYK 387
D+A + G GI + +G++ AE + E NG+ +L +Y +W
Sbjct: 265 DSASMIISHVGAGIPPSMVAGKIAAEVVTEFL-NGSV-----ELEEYERRWK-------- 310
Query: 388 VLDVLQKVFYRSNPAREAFVEMCA-DEYVQKM 418
D + V RSN + + ++ DE V K+
Sbjct: 311 --DAMYDVMVRSNYLKRMWDKIAERDERVNKL 340
>gi|433005156|ref|ZP_20193586.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE227]
gi|433153774|ref|ZP_20338729.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE176]
gi|431515061|gb|ELH92888.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE227]
gi|431675231|gb|ELJ41376.1| oxidoreductase with FAD/NAD(P)-binding domain-containing protein
[Escherichia coli KTE176]
Length = 429
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 134/318 (42%), Gaps = 43/318 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
I+RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAASAPIERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI A G NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILAGGVNSMLGR 168
Query: 216 S---INAGD-YDYAIAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDFYGWVFPKC 266
S ++A D + YA+ +E + + E++ V E A S G F
Sbjct: 169 SLGMVSASDPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYT 228
Query: 267 DHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR-- 315
+ +V G V DI Q + +D I GGK++ AH +PE
Sbjct: 229 NKDSVSLGLVCGLSDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288
Query: 316 -PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 289 VPQLVNDGVMIVGDAAGF 306
>gi|386388073|ref|ZP_10072999.1| geranylgeranyl reductase [Streptomyces tsukubaensis NRRL18488]
gi|385664458|gb|EIF88275.1| geranylgeranyl reductase [Streptomyces tsukubaensis NRRL18488]
Length = 457
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 100/236 (42%), Gaps = 32/236 (13%)
Query: 137 IGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKR 196
G++ R DA L E AEK GA + G+ + P T GE
Sbjct: 124 FGLINRPEFDALLVEHAEKAGAVLRTGVAVSRVEQHGAAVPDRRTVAVVTTT----GE-- 177
Query: 197 TLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDV-- 254
T+ AV+GADG+ SR+ K + + + + +P E++AE + G +
Sbjct: 178 TILAHAVVGADGSASRIGKHVGVKLDQVDLGLEAEIPVP-------ESVAEDWAGRVLID 230
Query: 255 ---SPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQL----ATRNRA--KDKILGGKIIRV 305
P YGWVFPK + VG +G K L A A + I G + R
Sbjct: 231 WGPMPGSYGWVFPKGRTLTVGVIAARGEGSATKRYLEDFIARLGLAGFEPSISSGHLTRC 290
Query: 306 EAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
+ P LS GRV + GDAAG + + EGI FA +SGR+ E + +E
Sbjct: 291 RSDDSP-------LSRGRVLVCGDAAGLLEPWTREGISFALRSGRLAGEWAVRIAE 339
>gi|271967484|ref|YP_003341680.1| FAD-binding monooxygenase protein [Streptosporangium roseum DSM
43021]
gi|270510659|gb|ACZ88937.1| monooxygenase FAD-binding protein [Streptosporangium roseum DSM
43021]
Length = 403
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 122/295 (41%), Gaps = 56/295 (18%)
Query: 87 KPCGGAIP------LCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMV 140
K CG + L ++G DL D R ++ ++SP V +P+ +V
Sbjct: 65 KACGDGVAAHGRDELALLGVPDLIADY--RPTRRLTVVSPGGARV-CATVARPNH---VV 118
Query: 141 RREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEV 200
R V DA L + A G V R + + + G +
Sbjct: 119 PRTVFDARLVDAARARGVEV-----------RRHRVRALAAHGGHIVVDGAFTAR----- 162
Query: 201 DAVIGADGANSRVAKSIN---AGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPD 257
AV+ ADGANS V + I + AIA + +PD+ V + + +
Sbjct: 163 -AVVAADGANSTVRRLIGVPASPARHTAIAVRGYADVPDDDDVQFIAMQKE------GWP 215
Query: 258 FYGWVFPKCDHVA-VGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRV---------EA 307
Y W FP D A VG G + + + L R ++L G++ + A
Sbjct: 216 AYAWSFPIGDGTANVGFGMLLPR--LHATGLPGR-----EVLHGRLAELLPHLPARDLRA 268
Query: 308 HPIPEHP-RPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSEN 361
H +P P RPR +GRV L GDAAG V +GEGIY+A SGR+ EA ++ + +
Sbjct: 269 HHLPLSPGRPRPGAGRVMLAGDAAGLVNPLTGEGIYYALVSGRLAGEAAVQAAGD 323
>gi|318059512|ref|ZP_07978235.1| hydrogenase [Streptomyces sp. SA3_actG]
Length = 423
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 125/313 (39%), Gaps = 57/313 (18%)
Query: 72 NGVETFLIER-KLDNCKPCGGAI--PL--CMVGEFDLPLDIIDRKVTKMKMISPSNVAVD 126
G L+E+ +L K CGG I P + FDLPL DR + ++D
Sbjct: 23 TGRRVLLLEKAELPRYKTCGGGIIGPSRDSLPPGFDLPLQ--DR-------VHAVTFSLD 73
Query: 127 --IGQTLKP-HEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM------DLPRNFEQP 177
+T K H G+V R D L E A + GA + G ++ +P
Sbjct: 74 GKYQRTRKARHMLFGLVNRPEFDLGLVEAAREAGAELRTGAVVQRVEQHGPAVPDRRTVA 133
Query: 178 YVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
VL E TL AV+GADG+ R+ + + + + +P+
Sbjct: 134 LVLQGGE------------TLLARAVVGADGSAGRIGAHVGVKLDQVDLGLELEIPVPET 181
Query: 238 KMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD---------IKKFQLA 288
++ + G P YGWVFPK D + VG + +G + + LA
Sbjct: 182 VAADWKGRVHIDWGP--LPGSYGWVFPKGDTLTVGVISARGEGAATKRYLEDFVGRLGLA 239
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSGEGIYFAAKS 347
+ K+ G + R P LS GRV + GDAAG + + EGI FA +S
Sbjct: 240 G---FEPKVSSGHLTRCRTEDSP-------LSRGRVLVAGDAAGLLEPWTREGISFALRS 289
Query: 348 GRMCAEAIIEGSE 360
GR+ E + SE
Sbjct: 290 GRLAGEWAVRVSE 302
>gi|238059338|ref|ZP_04604047.1| geranylgeranyl reductase [Micromonospora sp. ATCC 39149]
gi|237881149|gb|EEP69977.1| geranylgeranyl reductase [Micromonospora sp. ATCC 39149]
Length = 382
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 157/394 (39%), Gaps = 53/394 (13%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIP----LCMVGEFDLP 104
N + V+GGGPAG +AA A G+ T ++ER K CGG + + G D+P
Sbjct: 3 NWDLVVVGGGPAGLSAAHVAATAGLRTLVVERAAHPRYKTCGGGLIGTSLAAVAGRIDVP 62
Query: 105 LDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
+ +V ++ P I MVRR+ D LR A GA + +
Sbjct: 63 ---VHDRVDRVTFTRDGRRGFTRRHGDGP--LIAMVRRDEFDDRLRAAAVAAGAELRERV 117
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDY 224
+ R EQ + D + + + + VIGADG++ A+ +
Sbjct: 118 AV-----RAVEQ-------DPDRVRLRLADGDVVYARTVIGADGSSGVTARHVGVRYRQV 165
Query: 225 AIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKK 284
+ + + +P+ + + G P Y WVFPK D + VG + +G ++
Sbjct: 166 DLGLELELPVPEPHRRRWRGRLLLDWGS--IPGSYAWVFPKGDRLTVGV--IAGRGAGER 221
Query: 285 FQLATRNRAKDKI--LG----------GKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGY 332
TR +D + LG G + R A P GRV + GDAAG
Sbjct: 222 ----TRQYLRDFVCRLGLSGVSPEHDSGHLTRCRAEDSPLR------HGRVLVAGDAAGL 271
Query: 333 VTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVL 392
+ S EGI +A +SG + A++ G +G R + DL + + + DV
Sbjct: 272 LEPWSREGISYALRSGALAGAAVVAGDLDGYRRAVDRDLVPPMRAGHRLLEVFSRRPDVF 331
Query: 393 QKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYK 426
+ + P FV C + + +FD L +
Sbjct: 332 HALLA-TPPGWRMFVRFC----LGRASFDETLTR 360
>gi|294496261|ref|YP_003542754.1| 2,3-di-O-geranylgeranylglyceryl phosphate reductase
[Methanohalophilus mahii DSM 5219]
gi|292667260|gb|ADE37109.1| 2,3-di-O-geranylgeranylglyceryl phosphate reductase
[Methanohalophilus mahii DSM 5219]
Length = 410
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 150/345 (43%), Gaps = 37/345 (10%)
Query: 70 AKNGVETFLIERKLDNCKP--CG-GAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVD 126
A+ G++ LIE++ + P C G + + + I +T ++ SP ++
Sbjct: 24 AELGLDVLLIEKRQEIGDPVRCAEGVSKISLSDHIEPDPRWICADLTGSRIYSPDGTMIE 83
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----INGLFMKMDLPRNFEQPYVLY 181
+ + + E ++ R++ D L ++ K GA V GL M+ + Y ++
Sbjct: 84 MSEEMSGGEVGYVLERKIFDRALVDQCAKAGAEVRVKTRATGLIMEKGVVCGI---YAMH 140
Query: 182 YTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK------SINAGDYDYAIAFQERVKIP 235
+GE+ + VIGADG S+V + S+ D + + + +
Sbjct: 141 ----------LGEEYKIRSKIVIGADGMESKVGRWAGIDTSLKPSDMETCVQYL----VT 186
Query: 236 DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKGDIKKFQLATRNRAK 294
D + N + Y+G++++P Y WVFPK +++A +G G + K K+ +
Sbjct: 187 DIDI--DPNFCDFYLGNEIAPAGYLWVFPKGENMANIGVGILGSKSGDKRAIDYINKFIE 244
Query: 295 DKILGGKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAE 353
D G+II + +P P + +S + LVGDAA +G GI A ++G++ AE
Sbjct: 245 DVYPDGRIIEMVYGGVPVRGPIEKTVSDGLILVGDAARQSDPITGGGIINAMEAGKIAAE 304
Query: 354 AIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398
+ + G + L +Y W T + V+++ F +
Sbjct: 305 VTADAIKRGDYTTNT--LNEYETLWRSTIGKEIEYSLVVKETFVK 347
>gi|312194005|ref|YP_004014066.1| geranylgeranyl reductase [Frankia sp. EuI1c]
gi|311225341|gb|ADP78196.1| geranylgeranyl reductase [Frankia sp. EuI1c]
Length = 403
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 87/225 (38%), Gaps = 28/225 (12%)
Query: 186 DGTKGGVGEKR---TLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYY 242
DG G V E R L V+GADG +SR A + + + +K P +
Sbjct: 134 DGPAGAVVEIRGGPDLRASVVVGADGTSSRAAGYVGVRCDQVDLGLEAEIKAPAHVAARW 193
Query: 243 ENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD---------IKKFQLATRNRA 293
E M + P YGWVFPK D + VG G + + LA R
Sbjct: 194 ER--RMLLDWGPVPGSYGWVFPKGDVLTVGVIGAREDGPALRSYYERFVAQLGLADLPRL 251
Query: 294 KDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAE 353
D G + RV A P GRV + GDAAG + + EGI FA +SGR+
Sbjct: 252 HDS---GHLTRVRADGSPVR------RGRVLVAGDAAGLLDPWTREGISFALRSGRLAGS 302
Query: 354 AIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398
A + +D Y ++ D + P L +F R
Sbjct: 303 AAAAAAGGDQGALD-----AYPDRVDAVFGPEVTAGRTLLGLFTR 342
>gi|29828011|ref|NP_822645.1| hydrogenase [Streptomyces avermitilis MA-4680]
gi|29605113|dbj|BAC69180.1| putative hydrogenase [Streptomyces avermitilis MA-4680]
Length = 401
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 125/305 (40%), Gaps = 51/305 (16%)
Query: 77 FLIER-KLDNCKPCGGAI--PL--CMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTL 131
L+E+ +L K CGG I P + F+LP ++ ++ SN
Sbjct: 41 LLLEKAELPRYKTCGGGIIGPSRDALPPGFELPFQ------DRVHAVTFSNNGRFTRTRR 94
Query: 132 KPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGG 191
G++ R D L E A+K GA + G+ + E G+
Sbjct: 95 SKQMLFGLINRPEFDQQLVEHAQKAGAELRTGV--------------TVSRVEQHGSA-- 138
Query: 192 VGEKRTLEV----------DAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVY 241
V ++RT+ V AV+GADG+ SR+ + + + V+IP + V
Sbjct: 139 VPDRRTVAVVLQGGDSLLARAVVGADGSASRIGAHVGVKLDQVDLGLE--VEIPVPETVA 196
Query: 242 YENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQL----ATRNRA--KD 295
+ + + P YGWVFPK D + VG + +G K L A A +
Sbjct: 197 EDWQGRVLIDWGPMPGSYGWVFPKGDTLTVGVISARGEGAATKRYLEDFIARLGLAGFEP 256
Query: 296 KILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
I G + R A + P R GRV + GDAAG + + EGI FA +SGR+ E
Sbjct: 257 SISSGHLTRCRAD---DSPLSR---GRVLVCGDAAGLLEPWTREGISFALRSGRLAGEWA 310
Query: 356 IEGSE 360
+ +E
Sbjct: 311 VRIAE 315
>gi|288560727|ref|YP_003424213.1| geranylgeranyl reductase family protein [Methanobrevibacter
ruminantium M1]
gi|288543437|gb|ADC47321.1| geranylgeranyl reductase family protein [Methanobrevibacter
ruminantium M1]
Length = 396
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 142/341 (41%), Gaps = 33/341 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLD--II 108
V VIG GPAG +AA AK GV+ L+++K + P C + + DL +D +
Sbjct: 6 VLVIGAGPAGSSAARFAAKGGVDVILMDKKSEIGAPKRCAEGVSKKTFDKLDLEMDPHWV 65
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIG-MVRREVLDAYLRERAEKNGASVINGLFMK 167
+++ +++++P V + + + G ++ R+V D ++ A + GA + K
Sbjct: 66 TQEIAGVRLVAPDGTDVWLDEDVIDLPEAGYILERKVFDKHMAMEAGREGAQIKIKTQAK 125
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIA 227
L R + + + T +GE + +IGADG S VA+ Y
Sbjct: 126 -GLKREEDGSFTV-------TCESMGETFDINAKIIIGADGPESHVARWAGLKAYTKPKH 177
Query: 228 FQERVK--IPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVT---HKGDI 282
+ V+ + + KM N+ E Y G V+P Y W+FPK D + V G GD
Sbjct: 178 MEAGVQFEMCNAKM-EKSNVLEFYFG-SVAPGGYFWLFPKGDDI-VNAGLAIIPDMAGDK 234
Query: 283 KKFQL---ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGE 339
++ A N K + V P+ + + L GDAA V +G
Sbjct: 235 SAYEYLVDAVNNCYATKDAQPVELNVGGDPVGGLVK-EMYGDNIMLCGDAASQVNPLTGG 293
Query: 340 GIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRK-YLEKWD 379
GI GR E E I GD K +L+K++
Sbjct: 294 GITNGMMGGRFAGEVAAEA-------IKAGDCSKDFLKKYE 327
>gi|300857163|ref|YP_003782147.1| FAD dependent dehydrogenase [Clostridium ljungdahlii DSM 13528]
gi|300437278|gb|ADK17045.1| predicted FAD dependent dehydrogenase [Clostridium ljungdahlii DSM
13528]
Length = 431
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 155/362 (42%), Gaps = 45/362 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPC-GGAIPLCMVGEF------DLP 104
V V+G G +G AA +AK G++ +IE+ K K GG + M+ E + P
Sbjct: 7 VIVVGAGVSGLAATYVMAKEGLKVIVIEKGKYPGSKNVMGGVLYRHMMDEIIPEFWKEAP 66
Query: 105 LD--IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVIN 162
L+ I+++ + S + + KP V R D +L ++ + GA ++N
Sbjct: 67 LERPIVEQNFWLLGKESAAKTGYRGMEWSKPPYNNFTVFRGKFDQWLSKKCIEAGALIVN 126
Query: 163 GLFMKMDLPRNFEQPYVLYYTEY-DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGD 221
+K + N V T+ DG + D V+ ADG NS +AK++
Sbjct: 127 ETVVKECIVEN--NKVVGVRTDRPDGD---------IYADVVVLADGVNSLLAKNLGFHK 175
Query: 222 Y----DYAIAFQERVKIPDEKMVYYENL-------AEMYVGDDVSPDFYGWVFPKCDHVA 270
A+A E +K+P +K+ NL EM+ + +++ +H++
Sbjct: 176 EWRKDQVALAVMEELKLPSDKIEDRFNLDKGMGATVEMFGDGTLGMVGTAFIYTNNEHIS 235
Query: 271 VGTGTVTHKG---DIKKFQLATRNRA----KDKILGGKIIRVEAHPIPE---HPRPRRLS 320
+G G + + ++K ++L + K I GG+ AH IPE + P+ +
Sbjct: 236 IGCGALLSQMSERNVKPYELLEYIKQHPVIKPLIAGGEASEYYAHLIPEGGYNSIPKLVG 295
Query: 321 GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDK 380
V ++GDAA V EG SGR AE II+ + G +E L Y E +
Sbjct: 296 DGVLVIGDAAQLVNGIHREGSNLGMTSGRFAAETIIQAKKLGK--FNEQTLSHYQELLKE 353
Query: 381 TY 382
+Y
Sbjct: 354 SY 355
>gi|219853257|ref|YP_002467689.1| geranylgeranyl reductase [Methanosphaerula palustris E1-9c]
gi|219547516|gb|ACL17966.1| geranylgeranyl reductase [Methanosphaerula palustris E1-9c]
Length = 401
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 137/345 (39%), Gaps = 47/345 (13%)
Query: 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPLD 106
N V V+G GPAG AA LAK+G + LI++ K C G C+ + D
Sbjct: 9 NTTADVVVVGAGPAGVTAAYLLAKDGHQVLLIDKATFPRKKLCAG----CLT---EKTRD 61
Query: 107 IIDRK--VTKMKMISPSNVAV--DIGQTLKPHEYI---------GMVRREVLDAYLRERA 153
++ R +T+ MI VA D Q E I V R DA L A
Sbjct: 62 LLSRTFGLTETYMIREGIVAATADHYQISCRREMICKRNTSIPFTFVDRTAYDAKLLAAA 121
Query: 154 EKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRV 213
E+ G +VI G + P + DG RT+ +IGADG NSRV
Sbjct: 122 EEAGVTVITGCEVTS------VDPLIGLVMTRDG--------RTITGRYLIGADGVNSRV 167
Query: 214 AKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDF---------YGWVFP 264
+ D FQ + K V LA + G D F YGW FP
Sbjct: 168 RHAFPITPEDKNRWFQNLASTVEIK-VPRSRLAPPFSGIDHPILFFDLPGWKAGYGWAFP 226
Query: 265 KCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVA 324
+ V +G G + G+ + ++ A K L + + +P R + VA
Sbjct: 227 GEEEVILGIGGLKQGGERRVAEIFKTCLAA-KGLEDMVSHPQGWALPYGNFIRNPTFGVA 285
Query: 325 L-VGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDE 368
L VGDA G+V GEGI++A ++G + A A+ G D
Sbjct: 286 LLVGDAGGFVEPFLGEGIFYAHRTGELAAAAVHRALSEGGDAADH 330
>gi|422395644|ref|ZP_16475677.1| putative monooxygenase, FAD-binding [Propionibacterium acnes
HL097PA1]
gi|327333121|gb|EGE74848.1| putative monooxygenase, FAD-binding [Propionibacterium acnes
HL097PA1]
Length = 425
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 154/391 (39%), Gaps = 53/391 (13%)
Query: 64 AAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVGEFDLPLDIIDR---KVTKMKMI 118
A A LA+ G+ L+E+ K CG G P + L +D+ + K T+ I
Sbjct: 25 ATAAHLARRGLHVTLLEKATFPRDKVCGDGLTPRAVKQLIRLGIDVSEEAGWKHTEGLRI 84
Query: 119 SPSNVA--VDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMKMDLPRNFE 175
+A V L + GMV RR VLD L AE G +++ G N
Sbjct: 85 HGGRIAPFVLPWPELADYPNFGMVCRRTVLDERLARHAESQGVTLVEGA--------NVT 136
Query: 176 QPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYD-----YAIAFQE 230
P + G + G + + V V+ ADG +SR+ ++ D A+
Sbjct: 137 DPILDPSGRIRGVRTSDGTEYSAPV--VVAADGNSSRLGLAMGLHKRDDRPMGVAVRAYY 194
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDF---YGWVFPKCD-HVAVGTGTVTHKGDIKKFQ 286
R + D + + E+ E++ G D YGW FP+ D V +G G + +
Sbjct: 195 RSALSDSRNL--ESWLELWDGAPQKSDLLPGYGWAFPEGDGTVNIGLGMLDSSAAFGRTD 252
Query: 287 LATRNRAKDKILGGKI----------IRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKC 336
+ + L + IR A P+ + +P G + LVGDA G V
Sbjct: 253 YRSLMKRWLSHLPAEWTLDEEHREGPIRGAALPMAFNRQPHYRDG-LLLVGDAGGMVNPF 311
Query: 337 SGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVF 396
+GEGI +A ++G M A+AI E G R K LE + +T LQ+ F
Sbjct: 312 NGEGIDYAMEAGEMAADAIAEAHYRGHRTPSA---EKALEGYPRT----------LQRHF 358
Query: 397 YRSNPAREAFVEMCADEYVQKMTFDSYLYKR 427
FV + D V KM L +R
Sbjct: 359 GGYYRLGTIFVRLIGDPRVMKMCTTYGLPRR 389
>gi|91778672|ref|YP_553880.1| electron-transferring-flavoprotein dehydrogenase [Burkholderia
xenovorans LB400]
gi|91691332|gb|ABE34530.1| Electron-transferring-flavoprotein dehydrogenase [Burkholderia
xenovorans LB400]
Length = 436
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 163/392 (41%), Gaps = 73/392 (18%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLC-----MVGEF--DLPLD 106
V+G GP+G AAA T+A+ G++ IER + K GAI ++ +F D PL+
Sbjct: 11 VVGAGPSGNAAAYTMARAGLKVLQIERGEYPGSKNVQGAILYAKALEEIIPDFRDDAPLE 70
Query: 107 --IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
II++++ + S + + KP + R D + + + GA +I
Sbjct: 71 RHIIEQRIWMLDDTSFVGTHMRSEEYNKPPYNRYTIIRAQFDKWFSSKVREAGALLICET 130
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK------SIN 218
+K L + +Q + + D G V D V+ ADG NS +A+ I
Sbjct: 131 TVK-QLIMDGDQ---VVGVQCDREHGDV------YADVVVLADGVNSTLARKAGFHGEIE 180
Query: 219 AGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYG----------WVFPKCDH 268
AG+ A+A +E + +P+E + N+ E D V + G +++ +
Sbjct: 181 AGNV--ALAVKEILFMPEETIRQRFNIGE---DDGVVIEMVGRITDGMTGTGFLYTNKES 235
Query: 269 VAVGTGTVTHKGDIKKFQLATRNRAKDKIL---------------GGKIIRVEAHPIPE- 312
+ +G G + GD KK NR +L GG++ AH IPE
Sbjct: 236 LTIGVGCML--GDFKK----NPNRTSPYVLLEKMKQHPSIAPLIAGGEMKEYCAHLIPEG 289
Query: 313 --HPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGD 370
H PR +VGD+ G+V EG A +GR+ AE +I G
Sbjct: 290 GFHAIPRVYGNGWMIVGDSGGFVNAAHREGSNLAMTTGRLAAETVIHAKAAGLGY-RAAT 348
Query: 371 LRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPA 402
L+ Y D+++ V+ L K YR PA
Sbjct: 349 LKAYKAALDQSF-----VMKDLHK--YRDMPA 373
>gi|297571901|ref|YP_003697675.1| electron-transferring-flavoproteindehydrogenase [Arcanobacterium
haemolyticum DSM 20595]
gi|296932248|gb|ADH93056.1| Electron-transferring-flavoproteindehydrogenase [Arcanobacterium
haemolyticum DSM 20595]
Length = 433
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 156/368 (42%), Gaps = 52/368 (14%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPLCMVGEFDLPLDI- 107
+ V V+GGG AG A LA+ G E LIER ++ K G I C V E P D
Sbjct: 7 DFDVIVVGGGIAGSVCAYLLAQEGREVLLIERGVEAGTKNLSGGIFYCRVMEEIFP-DFA 65
Query: 108 ----IDRKVTK-----MKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGA 158
++R++T+ + S N+ + +P + ++R + D +L E+ E G
Sbjct: 66 NTAPVERRITRNCLSFLNKESAVNIDYWDNRLAEPVNAVSVLRAK-FDPWLAEQCENVGV 124
Query: 159 SVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN 218
+V+ G+ K+D + G + G E R V+ ADG NS +A+ N
Sbjct: 125 TVMPGI--KVDELLQDSGKVI-------GVRAGEDELRA---RVVVAADGVNSFLAQYAN 172
Query: 219 AGDYD----YAIAFQERVKIPDEKMVYYENL-----AEMYVGDDVSPDFYGWVFPKCDHV 269
D + + + + I ++ + NL A + D + G F +
Sbjct: 173 LRQKDPASCFGVGVKSVIHIGEKAVKERFNLSGDDGAAYAIVGDCTQGVAGGGFMYTNKD 232
Query: 270 AVGTGTVTHKGDIKKFQLATRNRAKDKILG----------GKIIRVEAHPIPEHPRPRR- 318
+V G V D+KK LA+ + D L G+++ H + E + +
Sbjct: 233 SVSIGVVMMLDDMKKHDLASSD-IHDHFLNHPFIAPFLEDGELLEYGCHLVAEGGKKMQH 291
Query: 319 --LSGRVALVGDAAGYV--TKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKY 374
+ + L+GDAAG+ T + G+ AA S R A AI E E G + L+KY
Sbjct: 292 DLVHDGLVLIGDAAGFTLNTGFTVRGMDLAAGSARCAARAISEALEKGD--YSQAALQKY 349
Query: 375 LEKWDKTY 382
++ ++++
Sbjct: 350 VDYTNESF 357
>gi|237743839|ref|ZP_04574320.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Fusobacterium sp. 7_1]
gi|229432870|gb|EEO43082.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Fusobacterium sp. 7_1]
Length = 431
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 150/353 (42%), Gaps = 50/353 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC--KPCGGAIPLCMVGEFDL 103
++ ++GGG AG +AA LA G+ ++ER D C K G E +
Sbjct: 1 MSEEKFDAIIVGGGLAGCSAAIVLANAGLAVLVVERG-DFCGAKNMTGGRLYGHSLEKII 59
Query: 104 PLDI----IDRKVTKMKM-ISPSNVAVDIGQTLKPHEYIG-----MVRREVLDAYLRERA 153
P I+RK+T+ K+ + + + DIG K V R D +L +A
Sbjct: 60 PNFAEEAPIERKITREKISLMSEDSSFDIGFGSKKLSSNNENASYTVLRSTFDRWLASKA 119
Query: 154 EKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEK-RTLEVDAVIGADGANSR 212
E+ GA +I G+ + + DG GV L D VI ADG NS
Sbjct: 120 EEAGAEIIPGILVDELIVE-------------DGKVVGVSATGEELYADVVILADGVNSL 166
Query: 213 VAKSINAGD----YDYAIAFQERVKIPDEKMVYY------ENLAEMYVGD-DVSPDFYGW 261
+A+S+ + A+ +E +K+ ++ + E +A + GD + G
Sbjct: 167 LAQSLGMKKELEPHQVAVGAKEVIKLGEDVINQRFAVNNGEGVAWLSCGDPTLGGFGGGL 226
Query: 262 VFPKCDHVAVG-TGTVTHKG--DIKKFQLATRNRAKDKIL----GGKIIRVEAHPIPE-- 312
++ D V+VG T++ G D+ QL R + I GG I AH +PE
Sbjct: 227 LYTNKDSVSVGVVATLSDIGHSDLSINQLLDRFKEHPAIAPYLEGGTSIEYSAHLVPEEG 286
Query: 313 -HPRPRRLSGRVALVGDAAGYVTKC--SGEGIYFAAKSGRMCAEAIIEGSENG 362
H P V + GDAAG+ + G+ FA +SGR+ AE +I+ E G
Sbjct: 287 LHMVPELYRDGVLVTGDAAGFCINLGFTVRGMDFAIESGRLAAETVIKAHEIG 339
>gi|134045410|ref|YP_001096896.1| geranylgeranyl reductase [Methanococcus maripaludis C5]
gi|132663035|gb|ABO34681.1| geranylgeranyl reductase [Methanococcus maripaludis C5]
Length = 386
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 137/333 (41%), Gaps = 27/333 (8%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V ++GGGP G E + V +++ C G + + E P +++
Sbjct: 8 VVIVGGGPCGFITGENIKNKKVLVLEEHQEIGVPLQCAGLLSKKCINELGNPKGSVNK-- 65
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPR 172
I N +V +G E + R+V+D + RA KN V+ + K+
Sbjct: 66 IGGAHIYSRNSSVTVGNEEIRAE---VFERKVMDKDIATRASKN-VDVLLKSYGKIKSSN 121
Query: 173 NFEQPYVLYYTEYDGTKGGVG---EKRTLEV--DAVIGADGANSRVAKSINAGDYDYAIA 227
N T +D TK + T EV + +IGADG S + +S+N D I
Sbjct: 122 NSS-------TIWDKTKHKLQIMHMDETFEVSPEVIIGADGIRSTIGRSLNMLDKKREII 174
Query: 228 FQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQ- 286
+++ + ++ ++ ++ S F+ W+ P + V G KK
Sbjct: 175 SGVQIEFVNAEI--DDDFVNVFYDKRYSEKFFTWIIPLGND-RVRVGMCDSNNSYKKLMD 231
Query: 287 -LATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAA 345
L T AK+ + + IP + + + LVGD+AG V SG G+Y+ A
Sbjct: 232 FLETNKIAKEILKNATPVEFICGAIP-IGYSKTVKDNIMLVGDSAGQVKPLSGGGLYYGA 290
Query: 346 KSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKW 378
K G++CA+ I + E G ID L+ Y + W
Sbjct: 291 KCGKICADTINQYFE-GNCDIDF--LKNYEKNW 320
>gi|72383688|ref|YP_293043.1| NAD binding site [Prochlorococcus marinus str. NATL2A]
gi|72003538|gb|AAZ59340.1| geranylgeranyl reductase, plantal and prokaryotic [Prochlorococcus
marinus str. NATL2A]
Length = 376
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 140/317 (44%), Gaps = 40/317 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC-KPCGGAIPLCMVGEFDLP-LDIIDR 110
VA+IGGG +G A LA N + ++E+ + + + CGG + + F L I+D
Sbjct: 6 VAIIGGGASGTTTAFHLASNSKKVCILEKNIFSSERICGGGMSAAVQNWFPFKLLPIVDE 65
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+T ++ S N + + L +V+RE LD++L ++A +G +++ F +D+
Sbjct: 66 VITNVEF-SWCNTDKVVAE-LSGSSPFWIVKREKLDSFLLDQALNSGCNLLT-TFKVVDI 122
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAG--DYDYAIAF 228
+ + V + T DG R +E AV+ ADG+ S K+ N G +A F
Sbjct: 123 KK---KSNVWHITALDG--------RQIEARAVVIADGSQSPWPKTFNLGPTQQKFASTF 171
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHK------GDI 282
R+K + A G + + + W FP + V +G GT +I
Sbjct: 172 SGRIK---RRGNLRNETARFEFG--LVKNGFAWAFPLDNEVNIGMGTFLDNKNSLPVNEI 226
Query: 283 KKFQLATRNRAKDKILGG-KIIRV-EAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGE 339
K L +++G K +R+ H +L+G + LVGDAA E
Sbjct: 227 LKSFLPDLCFDPSEVIGHEKKLRIWNGHC--------KLNGEGILLVGDAASLCDPFLAE 278
Query: 340 GIYFAAKSGRMCAEAII 356
G+ A SG A+++I
Sbjct: 279 GLRPALMSGFEAAKSLI 295
>gi|398788356|ref|ZP_10550520.1| geranylgeranyl reductase [Streptomyces auratus AGR0001]
gi|396992273|gb|EJJ03386.1| geranylgeranyl reductase [Streptomyces auratus AGR0001]
Length = 401
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 122/304 (40%), Gaps = 39/304 (12%)
Query: 72 NGVETFLIERK-LDNCKPCGGAI--PL--CMVGEFDLPLDIIDRKVTKMKMISPSNVAVD 126
G L+E+ L K CGG I P + FDLPL VT ++
Sbjct: 35 TGRRVLLLEKADLPRYKTCGGGIIGPSRDSLPPGFDLPLRDRVHAVT-------FSLNGR 87
Query: 127 IGQTLKPHEYI-GMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEY 185
+ +T + + G++ R DA L E A+ GA+V G+ + E P
Sbjct: 88 LTRTRRSKNMLFGLINRPEFDARLVESAQDAGATVRTGVTVARVEQHGAEVPDRRTVAVV 147
Query: 186 DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENL 245
+G+ + AV+GADG++ R+ + + + + +P V +
Sbjct: 148 ------LGDGEVVLARAVVGADGSSGRIGGHVGVKVDQVDLGLEAEIPVPAP--VAEDWA 199
Query: 246 AEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD---------IKKFQLATRNRAKDK 296
+ + P YGWVFPK D + VG + +G I + LA +
Sbjct: 200 GRVLIDWGPIPGSYGWVFPKGDTLTVGVISARGEGAATKRYLEDFIGRLGLAG---FEPS 256
Query: 297 ILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAII 356
I G + R A P GRV + GDAAG + + EGI FA +SGR+ E +
Sbjct: 257 ISSGHLTRCRADDSPLS------RGRVLVCGDAAGLLEPWTREGISFALRSGRLAGEWAV 310
Query: 357 EGSE 360
SE
Sbjct: 311 RVSE 314
>gi|419419817|ref|ZP_13960050.1| geranylgeranyl reductase family protein [Propionibacterium acnes
PRP-38]
gi|379979538|gb|EIA12858.1| geranylgeranyl reductase family protein [Propionibacterium acnes
PRP-38]
Length = 420
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 154/391 (39%), Gaps = 53/391 (13%)
Query: 64 AAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVGEFDLPLDIIDR---KVTKMKMI 118
A A LA+ G+ L+E+ K CG G P + L +D+ + K T+ I
Sbjct: 20 ATAAHLARRGLHVTLLEKATFPRDKVCGDGLTPRAVKQLIRLGIDVSEEAGWKHTEGLRI 79
Query: 119 SPSNVA--VDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMKMDLPRNFE 175
+A V L + GMV RR VLD L AE G +++ G N
Sbjct: 80 HGGRIAPFVLPWPELADYPNFGMVCRRTVLDERLARHAESQGVTLVEGA--------NVT 131
Query: 176 QPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYD-----YAIAFQE 230
P + G + G + + V V+ ADG +SR+ ++ D A+
Sbjct: 132 DPILDPSGRIRGVRTSDGTEYSAPV--VVAADGNSSRLGLAMGLHKRDDRPMGVAVRAYY 189
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDF---YGWVFPKCD-HVAVGTGTVTHKGDIKKFQ 286
R + D + + E+ E++ G D YGW FP+ D V +G G + +
Sbjct: 190 RSALSDSRNL--ESWLELWDGAPQKSDLLPGYGWAFPEGDGTVNIGLGMLDSSAAFGRTD 247
Query: 287 LATRNRAKDKILGGKI----------IRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKC 336
+ + L + IR A P+ + +P G + LVGDA G V
Sbjct: 248 YRSLMKRWLSHLPAEWTLDEEHREGPIRGAALPMAFNRQPHYRDG-LLLVGDAGGMVNPF 306
Query: 337 SGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVF 396
+GEGI +A ++G M A+AI E G R K LE + +T LQ+ F
Sbjct: 307 NGEGIDYAMEAGEMAADAIAEAHYRGHRTPSA---EKALEGYPRT----------LQRHF 353
Query: 397 YRSNPAREAFVEMCADEYVQKMTFDSYLYKR 427
FV + D V KM L +R
Sbjct: 354 GGYYRLGTIFVRLIGDPRVMKMCTTYGLPRR 384
>gi|336400066|ref|ZP_08580854.1| hypothetical protein HMPREF0404_00145 [Fusobacterium sp. 21_1A]
gi|336163263|gb|EGN66195.1| hypothetical protein HMPREF0404_00145 [Fusobacterium sp. 21_1A]
Length = 431
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 150/353 (42%), Gaps = 50/353 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC--KPCGGAIPLCMVGEFDL 103
++ ++GGG AG +AA LA G+ ++ER D C K G E +
Sbjct: 1 MSEEKFDAIIVGGGLAGCSAAIVLANAGLAVLVVERG-DFCGAKNMTGGRLYGHSLEKII 59
Query: 104 PLDI----IDRKVTKMKM-ISPSNVAVDIGQTLKPHEYIG-----MVRREVLDAYLRERA 153
P I+RK+T+ K+ + + + DIG K V R D +L +A
Sbjct: 60 PNFAEEAPIERKITREKISLMSEDSSFDIGFGSKKLSSNNENASYTVLRSTFDRWLASKA 119
Query: 154 EKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEK-RTLEVDAVIGADGANSR 212
E+ GA +I G+ + + DG GV L D VI ADG NS
Sbjct: 120 EEAGAEIIPGILVDELIVE-------------DGKVVGVSATGEELYADVVILADGVNSL 166
Query: 213 VAKSINAGD----YDYAIAFQERVKIPDEKMVYY------ENLAEMYVGD-DVSPDFYGW 261
+A+S+ + A+ +E +K+ ++ + E +A + GD + G
Sbjct: 167 LAQSLGMKKELEPHQVAVGAKEVIKLGEDVINQRFAVNNGEGVAWLSCGDPTLGGFGGGL 226
Query: 262 VFPKCDHVAVG-TGTVTHKG--DIKKFQLATRNRAKDKIL----GGKIIRVEAHPIPE-- 312
++ D V+VG T++ G D+ QL R + I GG I AH +PE
Sbjct: 227 LYTNKDSVSVGVVATLSDIGHSDLSINQLLDRFKEHPAIAPYLEGGTSIEYSAHLVPEEG 286
Query: 313 -HPRPRRLSGRVALVGDAAGYVTKC--SGEGIYFAAKSGRMCAEAIIEGSENG 362
H P V + GDAAG+ + G+ FA +SGR+ AE +I+ E G
Sbjct: 287 IHMVPELYRDGVLVTGDAAGFCINLGFTVRGMDFAVESGRLAAETVIKAHEIG 339
>gi|386838611|ref|YP_006243669.1| hydrogenase [Streptomyces hygroscopicus subsp. jinggangensis 5008]
gi|374098912|gb|AEY87796.1| putative hydrogenase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451791902|gb|AGF61951.1| putative hydrogenase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 413
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 127/314 (40%), Gaps = 69/314 (21%)
Query: 77 FLIER-KLDNCKPCGGAI--PL--CMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTL 131
L+E+ +L K CGG I P + F+LP ++ ++ SN
Sbjct: 41 LLLEKAELPRYKTCGGGIIGPSRDALPPGFELPFR------DRVHAVTFSNNGRFTRTRR 94
Query: 132 KPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGG 191
G++ R D L E A+K GA + G+ ++ E G+
Sbjct: 95 SKQMLFGLINRPEFDQQLVEHAQKAGAELRTGVTVQ--------------RVEQHGSA-- 138
Query: 192 VGEKRTLEV----------DAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVY 241
V ++RT+ V AV+GADG+ SR+ + + + + +P
Sbjct: 139 VPDRRTVAVVLQGGETVLARAVVGADGSASRIGAHVGVKLDQVDLGLEAEIPVP------ 192
Query: 242 YENLAEMYVGDDV-----SPDFYGWVFPKCDHVAVGTGTVTHKGD---------IKKFQL 287
E +AE + G + P YGWVFPK D + VG + +G I + L
Sbjct: 193 -ETVAEDWKGRVLIDWGPMPGSYGWVFPKGDTLTVGVISARGEGAATKRYLEDFIARLGL 251
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSGEGIYFAAK 346
A A I G + R A P LS GRV + GDAAG + + EGI FA +
Sbjct: 252 AGFEPA---ISSGHLTRCRADDSP-------LSRGRVLVCGDAAGLLEPWTREGISFALR 301
Query: 347 SGRMCAEAIIEGSE 360
SGR+ E + +E
Sbjct: 302 SGRLAGEWAVRIAE 315
>gi|297526968|ref|YP_003668992.1| geranylgeranyl reductase [Staphylothermus hellenicus DSM 12710]
gi|297255884|gb|ADI32093.1| geranylgeranyl reductase [Staphylothermus hellenicus DSM 12710]
Length = 458
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 169/409 (41%), Gaps = 62/409 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDN---CKPCGGAIPLCMVGEFDL--PLDI 107
V V+G G AG AA LA G + ++E K + K CG AI + E P +
Sbjct: 5 VIVVGAGVAGLNAAFVLASRGFKVAIVESKPRSRIGDKTCGDAIGVHHFEELGWHPPEET 64
Query: 108 IDRKVTKMKMISPSNVAVDI--GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
ID + +K+ SPS I G+ + V R +L RAE NGA +++
Sbjct: 65 IDHRYKGVKIYSPSEKYSIIVSGEGIS-------VNRLKFGQWLLRRAEDNGAVLLDKHV 117
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS------INA 219
+ L F+ V + K G+ E L DA I A GA + I+
Sbjct: 118 L---LGVKFDDNGVQSIKVKELGKPGLKE---LVADAFIDASGAKPALRSKLPLEWPISE 171
Query: 220 GDY--DYAIAFQERVKIPDEKMVYYENL--AEMYVGDDVSPDFYGWVFPKCDH---VAVG 272
Y DY IA++E ++ +K V E++ A +Y+ ++P Y W+FPK + +G
Sbjct: 172 RPYMTDYNIAYREVLET--DKPVNEEDVDYAVIYLNTIIAPGGYWWLFPKDPSGRIINIG 229
Query: 273 TGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAG 331
G + D N+ G++I +P P P + V + GDAA
Sbjct: 230 LGVIWGVNDYNPRH--NYNKYLKPRFKGRLIHAGGGMVPTRRPLPTLVWRNVGVAGDAAY 287
Query: 332 YVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDV 391
V G GI + ++ + A+ I E G M+DE + +++ + Y LD+
Sbjct: 288 TVNPVHGGGIGSSLQASAIVAKHIGNALEKG--MVDETATWQANKEYIQVYGAKQAALDI 345
Query: 392 LQKVFYRSNPAREAFVEMCADEYVQKMT---FDSYLYKRVVPGNPLEDL 437
L+ Y+QK++ F+ + ++V G + DL
Sbjct: 346 LRM-------------------YLQKLSNEDFEWIMKNKIVDGKAIYDL 375
>gi|333022635|ref|ZP_08450699.1| putative geranylgeranyl reductase [Streptomyces sp. Tu6071]
gi|332742487|gb|EGJ72928.1| putative geranylgeranyl reductase [Streptomyces sp. Tu6071]
Length = 438
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 124/313 (39%), Gaps = 57/313 (18%)
Query: 72 NGVETFLIERK-LDNCKPCGGAI--PL--CMVGEFDLPLDIIDRKVTKMKMISPSNVAVD 126
G L+E+ L K CGG I P + FDLPL DR + ++D
Sbjct: 38 TGRRVLLLEKAGLPRYKTCGGGIIGPSRDSLPPGFDLPLQ--DR-------VHAVTFSLD 88
Query: 127 --IGQTLKP-HEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM------DLPRNFEQP 177
+T K H G+V R D L E A + GA + G ++ +P
Sbjct: 89 GKYQRTRKARHMLFGLVNRPEFDLGLVEAAREAGAELRTGAVVQRVEQHGPAVPDRRTVA 148
Query: 178 YVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
VL E TL AV+GADG+ R+ + + + + +P+
Sbjct: 149 LVLQGGE------------TLLARAVVGADGSAGRIGAHVGVKLDQVDLGLELEIPVPET 196
Query: 238 KMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD---------IKKFQLA 288
++ + G P YGWVFPK D + VG + +G + + LA
Sbjct: 197 VAADWKGRVHIDWGP--LPGSYGWVFPKGDTLTVGVISARGEGAATKRYLEDFVGRLGLA 254
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSGEGIYFAAKS 347
+ K+ G + R P LS GRV + GDAAG + + EGI FA +S
Sbjct: 255 G---FEPKVSSGHLTRCRTEDSP-------LSRGRVLVAGDAAGLLEPWTREGISFALRS 304
Query: 348 GRMCAEAIIEGSE 360
GR+ E + SE
Sbjct: 305 GRLAGEWAVRVSE 317
>gi|456392768|gb|EMF58111.1| hydrogenase [Streptomyces bottropensis ATCC 25435]
Length = 401
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 131/312 (41%), Gaps = 65/312 (20%)
Query: 77 FLIER-KLDNCKPCGGAI--PL--CMVGEFDLPLDIIDRKVTKMKMISPSNVAVD--IGQ 129
L+E+ +L K CGG I P + F+LPL DR + ++D +
Sbjct: 41 LLLEKAELPRYKTCGGGIIGPSRDALPPGFELPLK--DR-------VHAVTFSLDGRYAR 91
Query: 130 TLKPHEYI-GMVRREVLDAYLRERAEKNGASVINGLFMK------MDLPRNFEQPYVLYY 182
T K + + G++ R D L E A+K GA + G+ + +P VL
Sbjct: 92 TRKSKQMLFGLINRPEFDQQLVEHAQKAGAELRTGVTVTRVEQHGSTVPDRRTVAVVL-- 149
Query: 183 TEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYY 242
+GG TL AV+GADG+ SR+ + + + + +P
Sbjct: 150 ------QGG----ETLFARAVVGADGSASRIGAHVGVKLEQVDLGLEAEIPVP------- 192
Query: 243 ENLAEMYVGDDV-----SPDFYGWVFPKCDHVAVGTGTVTHKGD---------IKKFQLA 288
E +AE + G + P YGWVFPK D + VG + +G I + LA
Sbjct: 193 ETVAEDWKGRVLIDWGPMPGSYGWVFPKGDTLTVGVISARGEGAATKRYLEDFIGRLGLA 252
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
+ + G + R A + P R GRV + GDAAG + + EGI FA +SG
Sbjct: 253 G---FEPSVSSGHLTRCRAD---DSPLSR---GRVLVCGDAAGLLEPWTREGISFALRSG 303
Query: 349 RMCAEAIIEGSE 360
R+ E + +E
Sbjct: 304 RLAGEWAVRIAE 315
>gi|19704876|ref|NP_602371.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|296328956|ref|ZP_06871464.1| FixC protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
gi|19712763|gb|AAL93670.1| Probable electron transfer flavoprotein-quinone oxidoreductase ydiS
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|296153945|gb|EFG94755.1| FixC protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
Length = 431
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 151/353 (42%), Gaps = 50/353 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC--KPCGGAIPLCMVGEFDL 103
++ ++GGG AG +AA LA G+ ++ER D C K G E +
Sbjct: 1 MSEEKFDAIIVGGGLAGCSAAIVLANAGLAVLVVERG-DFCGAKNMTGGRLYGHSLEKII 59
Query: 104 PLDI----IDRKVTKMKM-ISPSNVAVDIGQTLKPHEYIG-----MVRREVLDAYLRERA 153
P I+RK+T+ K+ + + ++DIG K V R D +L +A
Sbjct: 60 PNFAEEAPIERKITREKISLMSEDSSLDIGFGSKKLSSNNENASYTVLRSTFDRWLASKA 119
Query: 154 EKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEK-RTLEVDAVIGADGANSR 212
E+ GA +I G+ + + DG GV L D VI ADG NS
Sbjct: 120 EEAGAEIIPGILVDELIVE-------------DGKVVGVSATGEELYADVVILADGVNSL 166
Query: 213 VAKSINAGD----YDYAIAFQERVKIPDEKMVYY------ENLAEMYVGD-DVSPDFYGW 261
+A+S+ + A+ +E +K+ ++ + E +A + GD + G
Sbjct: 167 LAQSLGMKKELEPHQVAVGAKEVIKLGEDVINQRFAVNNGEGVAWLSCGDPTLGGFGGGL 226
Query: 262 VFPKCDHVAVG-TGTVTHKG--DIKKFQLATRNRAKDKIL----GGKIIRVEAHPIPE-- 312
++ D V+VG T++ G D+ QL R + I GG I H +PE
Sbjct: 227 LYTNKDSVSVGVVATLSDIGHSDLSINQLLDRFKEHPAIAPYLEGGTSIEYSGHLVPEEG 286
Query: 313 -HPRPRRLSGRVALVGDAAGYVTKC--SGEGIYFAAKSGRMCAEAIIEGSENG 362
H P V + GDAAG+ + G+ FA +SGR+ AEA+I+ E G
Sbjct: 287 LHMVPELYRDGVLVTGDAAGFCINLGFTVRGMDFAIESGRLAAEAVIKAHEIG 339
>gi|15669715|ref|NP_248528.1| bacteriochlorophyll synthase 43 kDa subunit ChlP
[Methanocaldococcus jannaschii DSM 2661]
gi|2493700|sp|Q58915.1|Y1520_METJA RecName: Full=Uncharacterized protein MJ1520
gi|1592151|gb|AAB99539.1| bacteriochlorophyll synthase 43 kDa subunit (chlP)
[Methanocaldococcus jannaschii DSM 2661]
Length = 387
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 159/376 (42%), Gaps = 49/376 (13%)
Query: 48 NRN-LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLP 104
NRN V +IGGGP G E + KNG ++E P C G I V E P
Sbjct: 2 NRNDYDVVIIGGGPVGCITGEYI-KNG-RVLIVEEHQSIGVPLQCAGLISKNGVKELGNP 59
Query: 105 LDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
++++ + I N V IG YI R+V+D + RA K ++
Sbjct: 60 KGVVNK--VRGAYIYSKNSMVKIGNE-GIRAYI--FERKVMDKDIAIRAAKKCDFLLKA- 113
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS---INAGD 221
+ K++ +N + + + +GEK TL ++GADGA + K +N +
Sbjct: 114 YGKIEKDKNGYKVEITH----------LGEKITLNPKIIVGADGAKTITGKKLGLVNNKN 163
Query: 222 YDYAIAFQ-ERVKIP-DEKMVYYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVGTGTVTH 278
+ + Q E V D+ VY +++ S F+ W+ P D V VG +
Sbjct: 164 REILSSCQFEMVNAEVDDDFVY------IFLDRKYSERFFTWIIPMGKDRVRVG---LID 214
Query: 279 KGDI--KKFQLATRNRAKDKIL-GGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTK 335
+G+ K + N+ +IL I +P + V LVGDAA +V
Sbjct: 215 RGNCYNKLIRFINENKIAKEILKNATITEFSTGSLPIGYLDKTFKDNVLLVGDAACHVKP 274
Query: 336 CSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEG--DLRKYLEKWDKTYWPTYKVLDVLQ 393
SG G+YF A G++ E I ++ ++E +L Y ++W +T+ K ++
Sbjct: 275 LSGGGLYFGAMGGKIAGEVI-------SKYLNEDIENLELYDKRWKETFGSEIKNGLRVR 327
Query: 394 KVFYR-SNPAREAFVE 408
K+F + N + +E
Sbjct: 328 KLFLKLGNDTLDKIIE 343
>gi|375082230|ref|ZP_09729298.1| Geranylgeranyl hydrogenase [Thermococcus litoralis DSM 5473]
gi|374743118|gb|EHR79488.1| Geranylgeranyl hydrogenase [Thermococcus litoralis DSM 5473]
Length = 372
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 135/306 (44%), Gaps = 37/306 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPLCMVGEFDLPLDIIDRK 111
V +IGGG G A LA + LIE K K C G I + +LP + I +
Sbjct: 5 VVIIGGGAVGNYLANLLAGE-FKVALIEAKTSFGGKACTGIIGAENFEKLNLPREAILNE 63
Query: 112 VTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDL 170
S + +I + P Y MV R++L+ L ERA K GA G F+
Sbjct: 64 FRGAVFYSRIQ-SFEIKRK-APQAY--MVDRKILEKSLAERAVKKGAEYYMGARFLGFKN 119
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINA-GDYDYAIAFQ 229
+ Q + E+ +E D +GADG +S+VA+ I A + ++ ++
Sbjct: 120 GKALVQRF--------------NERFEIEGDFYVGADGVSSKVAQEIGARAEAEFLSGYE 165
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLAT 289
V + D K ++ E++V D++ +F+ WV P + +A GT + G++ +F
Sbjct: 166 VEV-VGDFKK---KDFVEVWVNKDINEEFFMWVAPVNESLA-RVGTFGNYGNLMRFLRLR 220
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
+ + + ++A + R + G VALVGDAA + + GI + G
Sbjct: 221 LLKET------QFVEIKAGNVGFGFRKPWVKGNVALVGDAALQIKPLTAGGIVY----GM 270
Query: 350 MCAEAI 355
+CA A+
Sbjct: 271 LCAHAL 276
>gi|227828721|ref|YP_002830501.1| FAD dependent oxidoreductase [Sulfolobus islandicus M.14.25]
gi|227460517|gb|ACP39203.1| FAD dependent oxidoreductase [Sulfolobus islandicus M.14.25]
Length = 395
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 150/338 (44%), Gaps = 52/338 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPLCMVGEFDLPLDI---- 107
+ V+G GPAG +AA T A+ G + L+ER + K GA + + +F DI
Sbjct: 5 IVVVGAGPAGSSAAITAARGGAKVLLLERGPEPGSKNVSGA--MIRLEDFSSVYDIASIP 62
Query: 108 IDRKVTKMKMISPSN-----VAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVIN 162
I+RKV + +I SN ++V++ L V R LD ++ ++AEK GA +I
Sbjct: 63 IERKVKNVDLILLSNSNRTRISVNVESNL------ATVARLKLDKWMAQQAEKAGALLIT 116
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAG-- 220
+ + + R + Y E D GE R D V+ A+G N+ V+ N
Sbjct: 117 KTTV-LGVEREGNE----YKVETDR-----GEVRA---DRVVLAEGVNALVSMKANIRPD 163
Query: 221 -DYDYAIAFQERVKIPDEKMVYY--------ENLAEMYVGDDVSPDFYGWVFPKCDHVAV 271
D+A+ + V ++ V E ++ +G D P + G+++ D VA+
Sbjct: 164 LTPDHAVQTVKEVYSLNKDEVNKRFGFKADDEGVSWRILGTDPVP-YAGFLYVYKDAVAI 222
Query: 272 GTGT---VTHKGDIKKF----QLATRNRAKDKILGGKIIRVEAHPIPEH--PRPRRLSGR 322
G G + K I + ++ R + + G + A IPE+ P + SG+
Sbjct: 223 GAGIPMKILIKRKITPYTVLDEVKERLGFNELVKGASLREYSAKVIPEYGFPSWKACSGK 282
Query: 323 VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
V L GDA G V + GI A SG + +A +E E
Sbjct: 283 VYLAGDAIGLVDPLTFNGIGPAVASGVVAGKAALESYE 320
>gi|124025288|ref|YP_001014404.1| NAD binding site [Prochlorococcus marinus str. NATL1A]
gi|123960356|gb|ABM75139.1| NAD binding site [Prochlorococcus marinus str. NATL1A]
Length = 376
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 140/317 (44%), Gaps = 40/317 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC-KPCGGAIPLCMVGEFDLP-LDIIDR 110
VA+IGGG +G A LA + ++E+ + + K CGG + + F L I+D
Sbjct: 6 VAIIGGGASGTTTAFHLASKSKKVCILEKNVSSPEKICGGGMSAAVQNWFPFRLLPIVDE 65
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+T ++ S N + + L +V+RE LD++L ++A +G +++ F +D+
Sbjct: 66 VITNVEF-SWCNTDKVVAK-LSGSSPFWIVKRERLDSFLLDQALNSGCNLLT-TFNVVDI 122
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAG--DYDYAIAF 228
+ Q V + T DG R +E AV+ ADG+ S +K+ N G +A F
Sbjct: 123 RK---QSNVWHITALDG--------RQIEARAVVIADGSQSPWSKTFNLGPPQQKFASTF 171
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHK------GDI 282
R+K + A G + + + W FP + V +G GT +I
Sbjct: 172 SGRIK---RRGNLRTETARFEFG--LVKNGFAWAFPLDNEVNIGMGTFLDNKNSLPVNEI 226
Query: 283 KKFQLATRNRAKDKILGG-KIIRV-EAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGE 339
K L +++G K +R+ H +L+G + LVGDAA E
Sbjct: 227 LKSFLPDLGFDPSEVIGHEKKLRIWNGH--------YKLNGEGILLVGDAASLCDPFLAE 278
Query: 340 GIYFAAKSGRMCAEAII 356
G+ A SG A+++I
Sbjct: 279 GLRPALMSGFEAAKSLI 295
>gi|302549533|ref|ZP_07301875.1| hydrogenase [Streptomyces viridochromogenes DSM 40736]
gi|302467151|gb|EFL30244.1| hydrogenase [Streptomyces viridochromogenes DSM 40736]
Length = 414
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 100/241 (41%), Gaps = 42/241 (17%)
Query: 137 IGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKR 196
G++ R D L E A+K GA + G+ ++ E G+ V ++R
Sbjct: 100 FGLINRPEFDQQLVEHAQKAGAELRTGVTVQ--------------RVEQHGS--AVPDRR 143
Query: 197 TLEV----------DAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLA 246
T+ V AV+GADG+ SR+ + + + + +PD V +
Sbjct: 144 TVAVLLQGGEVLLARAVVGADGSASRIGAHVGVKVDQVDLGLEVEIPVPD--TVAEDWKG 201
Query: 247 EMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLAT------RNRAKDKILGG 300
+ + P YGWVFPK D + VG + +G K L + I G
Sbjct: 202 RVLIDWGPMPGSYGWVFPKGDTLTVGVISARGEGAATKRYLEEFVGRLGLAGFEPSISSG 261
Query: 301 KIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGS 359
+ R A P LS GRV + GDAAG + + EGI FA +SGR+ E + +
Sbjct: 262 HLTRCRADDSP-------LSRGRVLVCGDAAGLLEPWTREGISFALRSGRLAGEWAVRIA 314
Query: 360 E 360
E
Sbjct: 315 E 315
>gi|158312027|ref|YP_001504535.1| geranylgeranyl reductase [Frankia sp. EAN1pec]
gi|158107432|gb|ABW09629.1| geranylgeranyl reductase [Frankia sp. EAN1pec]
Length = 392
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 125/316 (39%), Gaps = 43/316 (13%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPL-DIIDR 110
V V+G GPAG +AA A+ G ++ER + K CGG + V + L ++
Sbjct: 12 VVVLGAGPAGTSAARAAAEAGARVCVLERMAVPRYKTCGGGLVGLSVDHAGIDLAPLVRS 71
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V + M V + + MV R LDA L + A+ GA V G+
Sbjct: 72 RVDVLTMTLDGRYPVTRCRK-DGRPLLSMVMRSELDAALLDSAKAAGAEVRTGV------ 124
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGE-------KRTLEVDAVIGADGANSRVAKSINAGDYD 223
+V E + G GE + V+GADG + R +
Sbjct: 125 -------HVTGLREEGTAEPGRGEVAVQVRSGPAVRARVVVGADGTSGRAGTHVGVTCDQ 177
Query: 224 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD-- 281
+ + ++P V E M + P YGWVFPK D + VG G
Sbjct: 178 VDVGLEGEFEVPAP--VAGEWSGRMLLDWGPVPGSYGWVFPKGDVLTVGVIGAREHGPAL 235
Query: 282 -------IKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVT 334
+++ L R D G + RV A P RR GRV L GDAAG +
Sbjct: 236 RRYYDALVERLGLTAAPRLHDS---GHLTRVRAAGSPL----RR--GRVLLAGDAAGLLD 286
Query: 335 KCSGEGIYFAAKSGRM 350
+ EGI FA +SGR+
Sbjct: 287 PWTREGISFALRSGRL 302
>gi|407462165|ref|YP_006773482.1| geranylgeranyl reductase [Candidatus Nitrosopumilus koreensis AR1]
gi|407045787|gb|AFS80540.1| geranylgeranyl reductase [Candidatus Nitrosopumilus koreensis AR1]
Length = 407
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 145/346 (41%), Gaps = 43/346 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
+ V+GGGPAG +AA +KNG++ +IE++ + G + + EF +P D +
Sbjct: 9 LVVVGGGPAGSSAAYAASKNGLKVAMIEKEESIAESVRTSGVTWIQNIKEFGIPDDCYN- 67
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDA-----YLRERAEKNGASVINGLF 165
V SP+N V IG T+ R VLD +L +AE+ G F
Sbjct: 68 PVKNFVFYSPNN-KVSIGDTV--------ARSAVLDVRKTYRWLATQAEEEGTETFVDTF 118
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
+K + + + T Y+ G+ +I A G S VAKS+
Sbjct: 119 VKDVIKDESGKIIGVKATRYEKNIEFYGK-------VIIDASGFQSTVAKSMG------L 165
Query: 226 IAFQERVKIPDEKMVYYENLAE----MYVGDDVSPDFYGWVFPKCDHVA---VGTGTVTH 278
+ ER E E++ + VG SP Y W+FP +++A VG G
Sbjct: 166 VKQWERFGAGAEYEAKVEHVQSDTWWLMVGQRYSPAGYAWIFPLGNNIARIGVGIGKPDS 225
Query: 279 KGD-IKKFQLATRNRAKDKILGGKIIRVEAH--PIPEHPRPRR-LSGRVALVGDAAGYVT 334
D I + + +N+ GKI +E H IP R+ + + LVGD+AG
Sbjct: 226 SVDPIARLKELIKNKEGPIADLGKIEPIEFHYGLIPNDGLSRKTVYDNLILVGDSAGQAN 285
Query: 335 KCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDK 380
EGI +A K GR+ E + ++ E L +Y E W K
Sbjct: 286 PLVLEGIRYAIKFGRIAGEVAAKAIKSND--TSEKKLSEYEENWKK 329
>gi|229585939|ref|YP_002844441.1| FAD dependent oxidoreductase [Sulfolobus islandicus M.16.27]
gi|238620913|ref|YP_002915739.1| FAD dependent oxidoreductase [Sulfolobus islandicus M.16.4]
gi|385774407|ref|YP_005646975.1| FAD dependent oxidoreductase [Sulfolobus islandicus HVE10/4]
gi|228020989|gb|ACP56396.1| FAD dependent oxidoreductase [Sulfolobus islandicus M.16.27]
gi|238381983|gb|ACR43071.1| FAD dependent oxidoreductase [Sulfolobus islandicus M.16.4]
gi|323478523|gb|ADX83761.1| FAD dependent oxidoreductase [Sulfolobus islandicus HVE10/4]
Length = 395
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 150/338 (44%), Gaps = 52/338 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPLCMVGEFDLPLDI---- 107
+ V+G GPAG +AA T A+ G + L+ER + K GA + + +F DI
Sbjct: 5 IVVVGAGPAGSSAAITAARGGAKVLLLERGPEPGSKNVSGA--MIRLEDFSSVYDIASIP 62
Query: 108 IDRKVTKMKMISPSN-----VAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVIN 162
I+RKV + +I SN ++V++ L V R LD ++ ++AEK GA +I
Sbjct: 63 IERKVKNVDLILLSNSNRTRISVNVESNL------ATVARLKLDKWMAQQAEKAGALLIT 116
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAG-- 220
+ + + R + Y E D GE R D V+ A+G N+ V+ N
Sbjct: 117 KTTV-LGVEREGNE----YKVETDR-----GEVRA---DRVVLAEGVNALVSMKANIRPD 163
Query: 221 -DYDYAIAFQERVKIPDEKMVYY--------ENLAEMYVGDDVSPDFYGWVFPKCDHVAV 271
D+A+ + V ++ V E ++ +G D P + G+++ D VA+
Sbjct: 164 LTPDHAVQTVKEVYSLNKDEVNKRFGFKADDEGVSWRILGTDPVP-YAGFLYVYKDAVAI 222
Query: 272 GTGT---VTHKGDIKKF----QLATRNRAKDKILGGKIIRVEAHPIPEH--PRPRRLSGR 322
G G + K I + ++ R + + G + A IPE+ P + SG+
Sbjct: 223 GAGIPMKILIKRKITPYTVLDEVKERLGFNELVKGASLREYSAKVIPEYGFPSWKACSGK 282
Query: 323 VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
V L GDA G V + GI A SG + +A +E E
Sbjct: 283 VYLAGDAIGLVDPLTFNGIGPAVASGVVAGKAALESYE 320
>gi|345013252|ref|YP_004815606.1| geranylgeranyl reductase [Streptomyces violaceusniger Tu 4113]
gi|344039601|gb|AEM85326.1| geranylgeranyl reductase [Streptomyces violaceusniger Tu 4113]
Length = 401
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 101/251 (40%), Gaps = 56/251 (22%)
Query: 134 HEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVG 193
H G++ R DA L E A+ GA V G+ + T + V
Sbjct: 96 HALFGLINRPEFDAALVEAAKDAGAEVRTGVAV----------------TRVEQHGPAVP 139
Query: 194 EKRTLEV----------DAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYE 243
++RT+ V AV+GADG+ SR+ + + + + +P E
Sbjct: 140 DRRTVAVVLADGETVLARAVVGADGSASRIGAHVGVKLDQVDLGLEAEIPVP-------E 192
Query: 244 NLAEMYVGDDV-----SPDFYGWVFPKCDHVAVGTGTVTHKGD---------IKKFQLAT 289
+AE + G + P YGWVFPK D + VG + +G I + LA
Sbjct: 193 TVAEDWAGRVLIDWGPMPGSYGWVFPKGDTLTVGVISARGEGAGTKRYLEDFIARLGLAG 252
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
+ I G + R A P GRV + GDAAG + + EGI +A +SGR
Sbjct: 253 ---FEPSISSGHLTRCRADDSPLS------RGRVLVCGDAAGLLEPWTREGISYALRSGR 303
Query: 350 MCAEAIIEGSE 360
+ E + +E
Sbjct: 304 LAGEWAVRVAE 314
>gi|373459519|ref|ZP_09551286.1| geranylgeranyl reductase [Caldithrix abyssi DSM 13497]
gi|371721183|gb|EHO42954.1| geranylgeranyl reductase [Caldithrix abyssi DSM 13497]
Length = 409
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 178/427 (41%), Gaps = 104/427 (24%)
Query: 71 KNGVETFLIER-KLDNCKPCGGAI---PLCMVGEFDLPLDIIDRKVTKMKMIS---PSNV 123
++G+E +IE+ + K CG AI + M+ E +L ++ ++ I+ P +
Sbjct: 25 RHGLEVCVIEKAQFPRDKICGDAISGKSMTMLKELELLDEVTTLPSARINAITFGNPDHN 84
Query: 124 AVDIGQTLKPHEYI--GMV-RREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVL 180
V I I G+V +R + D +L + K+ ASV G Y +
Sbjct: 85 TVTIPLLGDKRRGIPPGLVIKRLLFDEFLFNKVRKSAASVYEG--------------YQV 130
Query: 181 YYTEYDGTKG-GVGEKRTLEVDA-------VIGADGANSRVAKSINAGDYD---YAIAFQ 229
+DG + GV + T V++ +IGADG NS VA+ ++D + +A +
Sbjct: 131 NRLIFDGDRVIGVETRGTEHVNSISVLGKVIIGADGFNSIVARHTGLYEHDPEHWVVALR 190
Query: 230 ERVKIPDEKMVYYENLA------EMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKGDI 282
+ YY+N+ E++ D+V P Y W+FP D+VA +G G + HK
Sbjct: 191 Q----------YYKNVKGLNDTIELHYIDEVQPG-YLWLFPAGDNVANIGIGML-HKSMK 238
Query: 283 KKFQLATRNRAKDKILGGKIIR---VEAHP--------IPEHPRPRRLSGR-VALVGDAA 330
K+ + A K + EA P +P + R+ G L+GDAA
Sbjct: 239 KRN--VNLSEAMQKAINSPFFADRFAEAEPLEKPMGWNLPVASKHRKNYGHGFLLLGDAA 296
Query: 331 GYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDL-RKYLEKWDKTYWPTY--- 386
G + +GEGI A S ++ AE + E + + D ++L+++D+ W
Sbjct: 297 GLIDPFTGEGIGNALFSAKIAAETVAEA-------VKQNDFTEEFLKRYDQKLWQALGDE 349
Query: 387 --------------KVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGN 432
+L+ + K RSN RE M A++ + K F N
Sbjct: 350 LQVSAKLQRIGRISPLLNFVIKKAARSNHVREIISGMMANQ-IPKTEF----------AN 398
Query: 433 PLEDLKL 439
PL LKL
Sbjct: 399 PLFYLKL 405
>gi|187731234|ref|YP_001880459.1| hypothetical protein SbBS512_E1902 [Shigella boydii CDC 3083-94]
gi|187428226|gb|ACD07500.1| protein FixC homolog [Shigella boydii CDC 3083-94]
Length = 429
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 136/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDNKFDAIVVGADVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G L+ + V+ ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILQANVVVLADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQMVNDGVMIVGDAAGF 306
>gi|410722634|ref|ZP_11361903.1| flavin-dependent dehydrogenase [Methanobacterium sp. Maddingley
MBC34]
gi|410595965|gb|EKQ50653.1| flavin-dependent dehydrogenase [Methanobacterium sp. Maddingley
MBC34]
Length = 393
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 139/328 (42%), Gaps = 61/328 (18%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLD--II 108
+ VIG GPAG AA+ A G +I++K + P C + + + + L I
Sbjct: 6 ILVIGAGPAGSTAAKHAAIGGANVIVIDKKSEIGTPKRCAEGVSKDGLKKLGIELSPRWI 65
Query: 109 DRKVTKMKMISPSNVAVDIGQ-TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK 167
++ T ++M+SP+ AV++ + +K E ++ R++ D ++ A + GA ++ +
Sbjct: 66 AKEATGVRMVSPNGTAVNLTEDKVKLPEAGYILERKIFDKHMAMDAGRAGAKIMVKT-LA 124
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK------SINAGD 221
L R +Q V T +GE+ ++ VI ADG SRV + ++ +
Sbjct: 125 TGLRREEDQVMV--------TVENMGEELEIKAKIVIAADGPESRVGRWAGIKTALKPKN 176
Query: 222 YDYAIAFQE---RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVT 277
+ F+ ++ PD E + G V+P Y W+FPK D +A VG G +T
Sbjct: 177 MESCAQFEMAGVQMAEPD--------CIEFHFG-SVAPGGYAWIFPKGDDIANVGLGVLT 227
Query: 278 HKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL---------------SGR 322
D ++ VE++P ++ +P L +
Sbjct: 228 TITDKSAYEHLLE-------------FVESNPATKNAQPVELNIGGDPVGGLLKKMVADN 274
Query: 323 VALVGDAAGYVTKCSGEGIYFAAKSGRM 350
V + GDAA V +G GI GR+
Sbjct: 275 VLVTGDAASMVNPLTGGGIISGMLGGRI 302
>gi|406574042|ref|ZP_11049781.1| geranylgeranyl reductase [Janibacter hoylei PVAS-1]
gi|404556532|gb|EKA61995.1| geranylgeranyl reductase [Janibacter hoylei PVAS-1]
Length = 436
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 145/348 (41%), Gaps = 52/348 (14%)
Query: 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVGEFDL-- 103
+R++ V V+G GP G A A LAK G + L+E+ + K CG G P + +L
Sbjct: 11 DRSVDVIVVGAGPGGSATAAWLAKAGKDVVLLEKSRFPRDKICGDGLTPRAVRQLINLGV 70
Query: 104 PLDIIDRKVTK--MKMISPS-NVAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNGAS 159
PL D +++I + +D Y GMVR R LD L A GA
Sbjct: 71 PLSETDGWAHNQGLRIIGGGMRLQLDWPDVTSFPGY-GMVRARADLDEVLARHAAACGAE 129
Query: 160 VINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGV--------GEKRTLEVDAVIGADGANS 211
++ G RN +P G V GE T V+ ADG +S
Sbjct: 130 LLEG--------RNVSEPVRDESGRIVGVVAKVVDERGRATGETETYRAPVVVAADGVSS 181
Query: 212 RVAKSINAG-----DYDYAIAFQERVKIPDEKMVYYENLAEMYV----GDDVSPDFYGWV 262
R+ S+ G D A+A + + P Y E+ E++ G + YGW+
Sbjct: 182 RL--SVKMGREKREDRPMAVAVRAYYETPRHDDAYLESHLELWSTTPEGGRILMPGYGWL 239
Query: 263 FPKCD---HVAVGT-------GTVTHKGDIKKF---QLATRNRAKDKILGGKIIRVEAHP 309
F D +V +G G +K ++++ A +D I G I A P
Sbjct: 240 FGLGDGRSNVGLGVLNTSEAFGRTDYKDVMRRWVETMPAEWGINEDTITG--EITAAALP 297
Query: 310 IPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIE 357
+ + +P G + LVGDA G V +GEGI +A ++G AE I++
Sbjct: 298 MAFNRQPLYADG-LMLVGDAGGMVNPFNGEGIDYALEAGHAAAETIVQ 344
>gi|409357793|ref|ZP_11236162.1| dehydrogenase [Dietzia alimentaria 72]
Length = 418
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 142/327 (43%), Gaps = 27/327 (8%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVE-TFLIERKLDNCKPCG-GAIPLCMVGEFDLPLDIIDR 110
V V+G GPAG A A LA+ G E T L K CG G P M+ L L R
Sbjct: 13 VLVVGCGPAGSATAAWLARAGREVTVLDAATFPRDKTCGDGLTPRAMLEVDRLGLGGWAR 72
Query: 111 KVTKMKMISPSNVAVD--IGQTLKPHEYIG-MVRREVLDAYLRERAEKNGASVINGLFMK 167
++ + + + H G VRR V D LR+ A + GA V++G+ +
Sbjct: 73 DRITIRGLELRGFGHEQRVPWPAGHHGGTGSAVRRTVFDDRLRQTAVEAGAVVLDGVRVT 132
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAG---DYDY 224
D+ R + E + + G+ R + ++ ADG S V + + D Y
Sbjct: 133 -DVERGDDG-------EVNAVR--AGDSR-IACRTLVVADGVRSPVGRLLGRTWHRDTVY 181
Query: 225 AIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCD-HVAVGTGTVTHKG--- 280
A+A + V+ + + E+ D + YGWVFP D + +G G +
Sbjct: 182 AVAARSYVRSGRHDHEWIGSDLELRDQDGIIQPGYGWVFPLGDGDINLGVGALATSARPA 241
Query: 281 --DIKKF-QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKC 336
+K+ Q R+ + L G+ V + +P ++GR A VGD+A V
Sbjct: 242 NVAVKELLQHYARSVGDEWKLDGEPRAVTSALLPMGGAVSGIAGRNWAAVGDSAACVNPL 301
Query: 337 SGEGIYFAAKSGRMCAEAIIEGSENGT 363
+GEGI +A + GR+ AE I+ G +G+
Sbjct: 302 NGEGIDYALEGGRLLAELILSGDGSGS 328
>gi|298528729|ref|ZP_07016133.1| geranylgeranyl reductase [Desulfonatronospira thiodismutans ASO3-1]
gi|298512381|gb|EFI36283.1| geranylgeranyl reductase [Desulfonatronospira thiodismutans ASO3-1]
Length = 368
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 140/340 (41%), Gaps = 56/340 (16%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLDIIDRK 111
V +IG GPAG AA LA G++ ++++K K C G + + + L + +
Sbjct: 7 VIIIGCGPAGATAALLLAAKGMDVAVLDKKSFPRFKLCAGMLTQKTLDQCSLFYPELAHE 66
Query: 112 VTKMKMIS--PSNVAVDIGQTLKPHEYIG-------MVRREVLDAYLRERAEKNGASVIN 162
+ K +I S A+ G K Y G +V RE D E+ + GASV
Sbjct: 67 LKKRDIIRHVSSQYAISTG---KKRLYTGSSKYSYVLVDRESYDQLWHEKVRETGASVYR 123
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINA--- 219
+++D+P + T +G R ++GADG +SRV K++
Sbjct: 124 EQIVRVDIPES-------RVTAKNG--------RVFRGRFILGADGGSSRVRKTLALEKV 168
Query: 220 ----GDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVG--T 273
A+A + V + + + E++ G + PD Y W FP +G +
Sbjct: 169 VRPPWSKGSALALETFV---SRQQAGFPDFPELFTG--IVPDGYAWSFPGASRQRLGICS 223
Query: 274 GTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRP----RRLSG--RVALVG 327
V +++K L +L G+ + ++ I H P + G + L+G
Sbjct: 224 AVVKDGRELRKIML--------DLLAGQGVHLDEKEIRGHVLPYGDYEKTPGFQNILLLG 275
Query: 328 DAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMID 367
DAAG GEGIY+A +G + A A+ E R D
Sbjct: 276 DAAGMADPLLGEGIYYAHATGGLAARAVEECWSRNDRTAD 315
>gi|290962573|ref|YP_003493755.1| hydrogenase [Streptomyces scabiei 87.22]
gi|260652099|emb|CBG75231.1| putative hydrogenase [Streptomyces scabiei 87.22]
Length = 401
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 129/312 (41%), Gaps = 65/312 (20%)
Query: 77 FLIER-KLDNCKPCGGAI--PL--CMVGEFDLPLDIIDRKVTKMKMISPSNVAVD--IGQ 129
L+E+ +L K CGG I P + F+LPL DR + ++D +
Sbjct: 41 LLLEKAELPRYKTCGGGIIGPSRDALPPGFELPLK--DR-------VHAVTFSLDGRYAR 91
Query: 130 TLKPHEYI-GMVRREVLDAYLRERAEKNGASVINGLFMK------MDLPRNFEQPYVLYY 182
T K + + G++ R D L E A+K GA + G+ + +P VL
Sbjct: 92 TRKSKQMLFGLINRPEFDQQLVEHAQKAGAELRTGVTVTRVEQHGSAVPDRRTVAVVL-- 149
Query: 183 TEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYY 242
+GG TL AV+GADG+ SR+ + + + + +P
Sbjct: 150 ------QGG----ETLFARAVVGADGSASRIGAHVGVKLEQVDLGLEAEIPVP------- 192
Query: 243 ENLAEMYVGDDV-----SPDFYGWVFPKCDHVAVGTGTVTHKGD---------IKKFQLA 288
E +AE + G + P YGWVFPK D + VG + +G I + LA
Sbjct: 193 ETVAEDWKGRVLIDWGPMPGSYGWVFPKGDTLTVGVISARGEGAATKRYLEDFIGRLGLA 252
Query: 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSG 348
+ + G + R A P GRV + GDAAG + + EGI FA +SG
Sbjct: 253 G---FEPSVSSGHLTRCRADDSPLS------RGRVLVCGDAAGLLEPWTREGISFALRSG 303
Query: 349 RMCAEAIIEGSE 360
R+ E + +E
Sbjct: 304 RLAGEWAVRIAE 315
>gi|75906853|ref|YP_321149.1| geranylgeranyl reductase [Anabaena variabilis ATCC 29413]
gi|75700578|gb|ABA20254.1| geranylgeranyl reductase [Anabaena variabilis ATCC 29413]
Length = 373
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 133/319 (41%), Gaps = 48/319 (15%)
Query: 69 LAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLD-IIDRKVTKMKMISPSNVAVD 126
LAK G ++E++ L KPCGG + + FD I KV + N+
Sbjct: 20 LAKKGRSVLVLEKESLPRYKPCGGGVSPIVAEWFDFDFSPAISLKVDSFRFT--WNLEDP 77
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----INGLFMKMDLPRNFEQPYVLY 181
+ ++ E + MVRREV D +L ++A+K GA + + G+ K D
Sbjct: 78 VEAKIETKEPVWMVRREVFDHFLVQQAQKQGAELRDNTEVTGIEFKSD------------ 125
Query: 182 YTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIP----DE 237
Y + + G V + +I ADGA +AK + + +A ++P D+
Sbjct: 126 YWQVNTANGPVTGRY------LIAADGAKGPMAKWLGFKERKRRLAGALEAEVPAQVKDK 179
Query: 238 KMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKI 297
+++E + + Y W FPK + ++G GT G + F+ ++
Sbjct: 180 STIHFEF--------GLVKNGYIWNFPKEEGYSIGVGTFI-GGQPQDFKKILVEYSQLFN 230
Query: 298 LGGKIIRVEAHPIPEHPRPRRLSGRVA-LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI- 355
+ K + HPI ++L + A L G+AA V + EGI + SG M A A+
Sbjct: 231 IDVKTSKQYGHPIALWDGNQKLHTQNAILAGEAACVVDPMTAEGIRPSIYSGVMAAGAVD 290
Query: 356 ------IEGSENGTRMIDE 368
I E T +I E
Sbjct: 291 QALSGDINALEQYTEIIQE 309
>gi|284992926|ref|YP_003411480.1| geranylgeranyl reductase [Geodermatophilus obscurus DSM 43160]
gi|284066171|gb|ADB77109.1| geranylgeranyl reductase [Geodermatophilus obscurus DSM 43160]
Length = 419
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 156/360 (43%), Gaps = 37/360 (10%)
Query: 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVGEFDLPL 105
+R V V+G GPAG +AA LA+ G++ ++E+ +L K CG G P + D+ +
Sbjct: 5 DRRADVLVVGAGPAGSSAAWHLARAGLDVAVLEKARLPREKVCGDGLTPRGVKALDDMGV 64
Query: 106 DIIDRKVTKMKMISPSNVAVDIGQ-TLKPHEYIGMVR-REVLDAYLRERAEKNGASVING 163
D K ++ V++ L G++R R LDA L + A GA ++
Sbjct: 65 DTTGWVRHKGLRVTGGGRVVEVDWPVLDRWPSYGLIRGRRDLDARLADHAVAAGARLVQE 124
Query: 164 LFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKR---TLEVDAVIGADGANSRVAKSINA- 219
+ + L + + ++ E G R T V+ A+G + R+AK++
Sbjct: 125 VTVTGPLLDDAGRVAGVHAEE--------GPDRAPATWHAPLVVSAEGLSGRLAKALGLL 176
Query: 220 --GDYDYAIAFQERVKIP---DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGT 273
D +A + V P DE + +L+ D P YGW F D + VG
Sbjct: 177 RREDRPLGVAVRRYVSSPRTDDEYLDISFDLSTGGPSADSMPG-YGWAFGMGDGTSNVGF 235
Query: 274 GTV-THKGD------IKKFQLATRNRAKDKILGGK----IIRVEAHPIPEHPRPRRLSGR 322
G + T +G + + LAT + LG + +R P+ H P G
Sbjct: 236 GLLDTRRGTGAEPRAVLREWLATLP--AEWQLGEEHAVTPLRGAGLPMALHRGPAYTRG- 292
Query: 323 VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTY 382
+ L GDAAG V +GEGI +A ++GRM AE + G + E LR+Y + + Y
Sbjct: 293 LLLAGDAAGTVNPFNGEGISYALETGRMAAETAVAGLAAPEGLAREAVLRRYPARLREEY 352
>gi|297617063|ref|YP_003702222.1| FAD dependent oxidoreductase [Syntrophothermus lipocalidus DSM
12680]
gi|297144900|gb|ADI01657.1| FAD dependent oxidoreductase [Syntrophothermus lipocalidus DSM
12680]
Length = 431
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 156/371 (42%), Gaps = 61/371 (16%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-------KLDNCKPCGGAIPLCMV 98
+ V+G GPAG AA T+A+ G++ LI+R + + A+ +
Sbjct: 1 MAEEKFTAVVVGAGPAGSTAAYTMAREGLDVLLIDRADSPGAKNMFGGRMYSYALNRVIP 60
Query: 99 GEFD-LPLDIIDRKVTK--MKMISPSNVAVDIGQTLK----PHEYIGMVRREVLDAYLRE 151
G ++ PL+ R V + M ++ V Q K PH + R E DA+L
Sbjct: 61 GFWEEAPLE---RPVVREAMVIVDGERVVTFTCQDEKWLKEPHHSFTLFRAE-FDAWLAG 116
Query: 152 RAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGV--GEKRTLEVDAVIGADGA 209
+AE+ GA + G+ + L + DG GV GE L D VI ADGA
Sbjct: 117 KAEEAGALLACGIRVDDVLMK-------------DGKVVGVRAGEDEIL-ADVVIAADGA 162
Query: 210 NSRVAKSINAGD----YDYAIAFQERVKIPDEKMVYYENL------AEMYVGDDVSPDFY 259
NS + + + A ++ +++P + NL A +Y+G D +
Sbjct: 163 NSLITEKTGLRKKVLAREVATGVKQVIELPPGAINERFNLAGDGGQASLYIG-DCTKGMT 221
Query: 260 GWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPI 310
G F + ++ G V +++ Q + +D I GG+++ AH +
Sbjct: 222 GGGFLYTNKSSISLGLVIKASELQDDQYRIVDLIEDFKVHPAIAPLIEGGEVVEYSAHLV 281
Query: 311 PE---HPRPRRLSGRVALVGDAAGYVTKCSGE--GIYFAAKSGRMCAEAIIEGSENGTRM 365
PE P +S + + GDAAG+V + G+ A SG+ A+A+++ N
Sbjct: 282 PEGGMSMMPTLVSDGILVTGDAAGFVLNLGYQVRGMDLAIASGQAAAQAVLKAKSN-NDF 340
Query: 366 IDEGDLRKYLE 376
EG L+ YL+
Sbjct: 341 TKEG-LKGYLD 350
>gi|295835148|ref|ZP_06822081.1| geranylgeranyl reductase [Streptomyces sp. SPB74]
gi|197697853|gb|EDY44786.1| geranylgeranyl reductase [Streptomyces sp. SPB74]
Length = 438
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 140/338 (41%), Gaps = 51/338 (15%)
Query: 44 PKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAI--PL--CMV 98
P T+R V V+G GPAG +AA A G L+E+ L K CGG I P +
Sbjct: 10 PAATSRVWDVVVVGAGPAGASAAYAAAVTGRRVLLLEKAALPRYKTCGGGIVGPSRDSLP 69
Query: 99 GEFDLPLDIIDRKVTKMKMISPSNVAVD--IGQTLKP-HEYIGMVRREVLDAYLRERAEK 155
FDLPL DR + ++D +T K H G+V R D L + A +
Sbjct: 70 PGFDLPLQ--DR-------VHAVTFSLDGRYQRTRKARHMLFGLVNRPEFDQRLVDAACE 120
Query: 156 NGASVINGLFMKM------DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGA 209
GA + G ++ +P VL E TL AV+GADG+
Sbjct: 121 AGAELRTGAVVQRVEQHGPAVPDRRTVALVLQSGE------------TLLARAVVGADGS 168
Query: 210 NSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHV 269
R+ + + + + +P+ ++ + G P YGWVFPK D +
Sbjct: 169 AGRIGAHVGVKLDQVDLGLELEIPVPETVAADWKGRVHIDWGP--LPGSYGWVFPKGDTL 226
Query: 270 AVGTGTVTHKGDIKKFQL----ATRNRA--KDKILGGKIIRVEAHPIPEHPRPRRLS-GR 322
VG + +G K L A A + K+ G + R P LS GR
Sbjct: 227 TVGVISARGEGAATKRYLEDFVARIGLAGFEPKVSSGHLTRCRTEDSP-------LSRGR 279
Query: 323 VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
V + GDAAG + + EGI FA +SGR+ E + SE
Sbjct: 280 VLVAGDAAGLLEPWTREGISFALRSGRLAGEWAVRVSE 317
>gi|383641131|ref|ZP_09953537.1| hydrogenase [Streptomyces chartreusis NRRL 12338]
Length = 414
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 125/306 (40%), Gaps = 53/306 (17%)
Query: 77 FLIER-KLDNCKPCGGAI--PL--CMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTL 131
L+E+ +L K CGG I P + F+LPL ++ ++ S+
Sbjct: 41 LLLEKAELPRYKTCGGGIIGPSRDALPPGFELPLR------DRVHAVTFSHNGRFTRTRR 94
Query: 132 KPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGG 191
G++ R D L E A+K GA + G+ ++ E G+
Sbjct: 95 SKQMLFGLINRPEFDQQLVEHAQKAGAELRTGVTVQ--------------RVEQHGS--A 138
Query: 192 VGEKRTLEV----------DAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVY 241
V ++RT+ V AV+GADG+ SR+ + + + V+IP + V
Sbjct: 139 VPDRRTVAVILQGGEVLLARAVVGADGSASRIGAHVGVKVDQVDLGLE--VEIPVPETVA 196
Query: 242 YENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLAT------RNRAKD 295
+ + + P YGWVFPK D + VG + +G K L +
Sbjct: 197 EDWQGRVLIDWGPMPGSYGWVFPKGDTLTVGVISARGEGAATKRYLEEFVGRLGLAGFEP 256
Query: 296 KILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEA 354
I G + R A P LS GRV + GDAAG + + EGI FA +SGR+ E
Sbjct: 257 SISSGHLTRCRADDSP-------LSRGRVLVCGDAAGLLEPWTREGISFALRSGRLAGEW 309
Query: 355 IIEGSE 360
+ +E
Sbjct: 310 AVRIAE 315
>gi|416275038|ref|ZP_11643863.1| putative electron transfer flavoprotein-quinone oxidoreductase FixC
[Shigella dysenteriae CDC 74-1112]
gi|320173291|gb|EFW48497.1| putative electron transfer flavoprotein-quinone oxidoreductase FixC
[Shigella dysenteriae CDC 74-1112]
Length = 429
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 136/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGADVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G L+ + V+ ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILQANVVVLADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGRFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQMVNDGVMIVGDAAGF 306
>gi|418473580|ref|ZP_13043151.1| hydrogenase [Streptomyces coelicoflavus ZG0656]
gi|371545804|gb|EHN74393.1| hydrogenase [Streptomyces coelicoflavus ZG0656]
Length = 428
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 125/311 (40%), Gaps = 63/311 (20%)
Query: 77 FLIER-KLDNCKPCGGAI--PL--CMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTL 131
L+E+ +L K CGG I P + F+LP ++ ++ SN
Sbjct: 41 LLLEKAELPRYKTCGGGIIGPSRDTLPPGFELPFQ------DRVHAVTFSNNGRFTRTRR 94
Query: 132 KPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGG 191
G++ R D + E A+K GA + G + E G+
Sbjct: 95 SRQMLFGLINRPEFDLQMVEHAQKAGAELRTG--------------ATVTRVEQHGS--A 138
Query: 192 VGEKRTLEV----------DAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVY 241
V ++RT+ V AV+GADG+ SR+ + + + + +P
Sbjct: 139 VPDRRTVAVVLQGGETVLARAVVGADGSASRIGAHVGVKLDQVDLGLEAEIPVP------ 192
Query: 242 YENLAEMYVGDDVS-----PDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQL----ATRNR 292
E +AE + G + P YGWVFPK D + VG + +G K L A
Sbjct: 193 -ETVAEDWKGRVLIDWGPIPGSYGWVFPKGDTLTVGVISARGEGAATKRYLEDFVARLGL 251
Query: 293 A--KDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
A + I G + R A P LS GRV + GDAAG + + EGI FA +SGR
Sbjct: 252 AGFEPSISSGHLTRCRADDSP-------LSRGRVLVCGDAAGLLEPWTREGISFALRSGR 304
Query: 350 MCAEAIIEGSE 360
+ E + SE
Sbjct: 305 LAGEWAVRVSE 315
>gi|409992789|ref|ZP_11275960.1| geranylgeranyl reductase [Arthrospira platensis str. Paraca]
gi|409936368|gb|EKN77861.1| geranylgeranyl reductase [Arthrospira platensis str. Paraca]
Length = 363
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 128/330 (38%), Gaps = 73/330 (22%)
Query: 69 LAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPL-----DIIDRKVTKMKMISPSN 122
LAK G ++E+ KPCGG + + FD +D+ K+ P+
Sbjct: 20 LAKRGRNPLVVEKNSWPRNKPCGGGVSPAIASWFDFDFTPAISTTVDKIRYTFKLADPAE 79
Query: 123 VAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----INGLFMKMD----LPRN 173
A+ KP + MVRR+V DA+L ++A+ GAS + G+ K D N
Sbjct: 80 TAIS-----KP---MWMVRRDVFDAFLMQQAQDQGASFQPNTEVTGIKFKGDSWQLTTAN 131
Query: 174 FEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVK 233
E Y DG KG VG L+ +N R+A A F+
Sbjct: 132 GETLTGRYLIAADGAKGPVGSWLRLKQ--------SNPRLAMVTEATQLSDVPTFE---- 179
Query: 234 IPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRA 293
MV +L W FPK D V T K +N
Sbjct: 180 ---FGMVKNGSL---------------WGFPKADGYTVSAATFRGKD--------PKNLG 213
Query: 294 KDKILGGKIIRVEAH-PIPEHPR-----PRRLSGRVALV-GDAAGYVTKCSGEGIYFAAK 346
+D K + + + PI EHP R L G+ AL+ G+AA V SGEGI A
Sbjct: 214 QDLSQYLKALGLNPNSPIVEHPLRLWDGDRTLHGQNALIAGEAASIVDPLSGEGIRPAIL 273
Query: 347 SGRMCAEAIIEGSENGTRMIDEGDLRKYLE 376
+G AEA I+ + G D+ L KY E
Sbjct: 274 TGVKAAEA-IDAAIGG----DQSALEKYTE 298
>gi|420380274|ref|ZP_14879741.1| FAD binding domain protein [Shigella dysenteriae 225-75]
gi|391302570|gb|EIQ60427.1| FAD binding domain protein [Shigella dysenteriae 225-75]
Length = 429
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 136/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGADVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKIFFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G L+ + V+ ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILQANVVVLADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGRFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQMVNDGVMIVGDAAGF 306
>gi|336476628|ref|YP_004615769.1| geranylgeranyl reductase [Methanosalsum zhilinae DSM 4017]
gi|335930009|gb|AEH60550.1| geranylgeranyl reductase [Methanosalsum zhilinae DSM 4017]
Length = 396
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 155/381 (40%), Gaps = 65/381 (17%)
Query: 71 KNGVETFLIERKLDNCKP--CGGAIPLC------MVGEFDLPLDI------IDRKVTK-M 115
K G L++RK D P CGG +P C +V ++P + RK T
Sbjct: 27 KKGASVLLVDRKKDIGVPLQCGGFLP-CYDVLQELVPNAEIPYTLKKYPSECVRKTTDYQ 85
Query: 116 KMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFE 175
+ I+P G + ++ R D +L E A K GA V+ G + D+ N
Sbjct: 86 RFIAPD------GNSKGFEVNASVIDRRRFDKFLVEEAAKAGAKVLVGTNVT-DIKGNC- 137
Query: 176 QPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN-AGDYD-----YAIAFQ 229
E DG G K ++ D +IGADG N+ V K N D+D AI ++
Sbjct: 138 -------VEADGVFG----KFSINSDVIIGADGPNTTVGKIKNMVRDHDPMEMATAIEYE 186
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGT---VTHKG----D 281
D + V EMY G D P Y W+ P+ + A +G G + KG D
Sbjct: 187 LTGVDVDREAV------EMYFGKDYVPGGYAWIIPQERNSANIGIGIRRPMCKKGMSFRD 240
Query: 282 IKKFQLATRNRAKDKILGGKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAGYVTKCSGEG 340
+ A K+ G I+ V A +P + + L GDAAG + +G G
Sbjct: 241 YLNHFMYNHPVAGKKLSRGAIVSVVAGLVPVGGAVGKTAEDNILLAGDAAGQLIATNGGG 300
Query: 341 IYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKV---FY 397
I + G++ E ++ S NG+ + E Y +W + K ++K+
Sbjct: 301 IPTSMIGGKIAGETAVD-SINGSSQLTE-----YENRWKEQMGLEIKTAVYIRKLMDNLM 354
Query: 398 RSNPAREAFVEMCADEYVQKM 418
RS+ A + M + E+++ +
Sbjct: 355 RSDSMMSASIRMISSEHMKAI 375
>gi|317130075|ref|YP_004096357.1| geranylgeranyl reductase [Bacillus cellulosilyticus DSM 2522]
gi|315475023|gb|ADU31626.1| geranylgeranyl reductase [Bacillus cellulosilyticus DSM 2522]
Length = 431
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 148/348 (42%), Gaps = 59/348 (16%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPL-----CMVGEF--DLP 104
V V+G GPAG + A T AKNG+ LIER + K G I ++ EF + P
Sbjct: 7 VIVVGAGPAGTSCAYTCAKNGLNVLLIERGEFPGAKNVMGGILYRKQMEEIIPEFWKEAP 66
Query: 105 LD--IIDRK---VTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGAS 159
L+ +++++ + K M++ S ++ G+ +P ++R + D + +A + GA+
Sbjct: 67 LERPVVEQRFWFLDKESMVTTSYKGLEWGK--EPFNNFTVLRAK-FDKWFAAKAVEQGAT 123
Query: 160 VINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKR---TLEVDAVIGADGANSRVAKS 216
+IN + V DG GV R + D V+ DG NS +AK
Sbjct: 124 LIN-------------ETVVTECIVEDGKVVGVRTDRPDGDIYADVVVLCDGVNSLLAKK 170
Query: 217 INAGD----YDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYG----------WV 262
+ + A+ E +K+P + + N+ + VS + +G ++
Sbjct: 171 LGFHKEWKPAEVALTVMEVMKLPKKTINERFNVND---EQGVSIEIFGDSTQGALGTAFL 227
Query: 263 FPKCDHVAVGTGTVTH---KGDIKKFQLATRNR----AKDKILGGKIIRVEAHPIPE--- 312
+ D + +G GT K +K ++L + + I G + AH IPE
Sbjct: 228 YTNKDSINIGVGTTLSSMIKKKMKPYKLLEYVKEHPMVQPYIEGAETQEYLAHLIPEGGY 287
Query: 313 HPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
P+ + V + GDAA V EG A SG+M AE I+ E
Sbjct: 288 KSIPKLVGDGVIVAGDAAQLVNAIHREGSNMAMSSGKMAAETILRAKE 335
>gi|219667088|ref|YP_002457523.1| FAD dependent oxidoreductase [Desulfitobacterium hafniense DCB-2]
gi|219537348|gb|ACL19087.1| FAD dependent oxidoreductase [Desulfitobacterium hafniense DCB-2]
Length = 430
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 181/432 (41%), Gaps = 63/432 (14%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEF--DLPLDI-ID 109
V+GGG AG AA LAK G+E L+ER + GG I +G+ D + ++
Sbjct: 10 VVGGGIAGTVAAYLLAKEGLEVILVERGNYAGSKNMTGGRIYSHSLGKIMPDFAREAPVE 69
Query: 110 RKVTKMK---MISPSNVAVDIGQT---LKPHEYIGMVRREVLDAYLRERAEKNGASVING 163
R++T+ K M SNV +D + ++ + ++R V D +L E+AE+ G +I G
Sbjct: 70 RRITREKISLMTDESNVTLDFYSSKLGVQGSDSYSILRG-VFDQWLAEKAEEAGVQIIPG 128
Query: 164 LFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN----A 219
+ + + R + G V + LE + I ADG NS +A+ +
Sbjct: 129 IRVDDLIIREGK------------VCGVVAGEDELEANITILADGVNSLLAQKLGFRGEL 176
Query: 220 GDYDYAIAFQERVKIPDEKMV------YYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGT 273
+ A+ +E +++P + + E A ++ G S G F + ++
Sbjct: 177 AAHHVAVGAKEIIELPPQVIEDRFNCNGNEGTAWLFAGYP-SDGRVGGGFLYTNKSSISL 235
Query: 274 GTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR---PRRLSG 321
G VT D+ K +D I GK+I H +PE P+ +
Sbjct: 236 GVVTTLSDVIKGSKTVPQMLEDFKQHPAVQPLIKDGKMIEYSGHLVPEAGLAMIPKIVGN 295
Query: 322 RVALVGDAAGYVTKCS--GEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWD 379
V +VGDAAG+ G+ FA S A+A+++ E + EG L Y +
Sbjct: 296 GVLVVGDAAGFCINLGYMVRGMDFAVASAECAAKAVLKAKE--AQDFSEGYLHCYQGLLE 353
Query: 380 KTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKL 439
+++ V+ L++ Y+ P +EY KM D VV G P + L+
Sbjct: 354 QSF-----VMQDLKR--YKDFPHFLEETPRIFNEY-PKMAADLLADMFVVKGEPAQPLRK 405
Query: 440 A----VNTIGSL 447
VN IG L
Sbjct: 406 TIMQHVNKIGLL 417
>gi|443629548|ref|ZP_21113872.1| putative hydrogenase [Streptomyces viridochromogenes Tue57]
gi|443336936|gb|ELS51254.1| putative hydrogenase [Streptomyces viridochromogenes Tue57]
Length = 412
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 102/242 (42%), Gaps = 44/242 (18%)
Query: 137 IGMVRREVLDAYLRERAEKNGASVINGLFMK------MDLPRNFEQPYVLYYTEYDGTKG 190
G++ R D L E A+K GA + G+ ++ +P VL +G
Sbjct: 100 FGLINRPEFDQQLVEHAQKAGAELRTGVTVQRVEQHGSAVPDRRSVAVVL--------QG 151
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYV 250
G TL AV+GADG+ SR+ + + + + +P E +AE +
Sbjct: 152 G----ETLLARAVVGADGSASRIGAHVGVKLDQVDLGLEAEIPVP-------ETVAEDWK 200
Query: 251 GDDVS-----PDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLAT------RNRAKDKILG 299
G + P YGWVFPK + + VG + +G K L + + I
Sbjct: 201 GRVLLDWGPIPGSYGWVFPKGETLTVGVISARGEGAATKRYLEEFIGRLGLSGFEPSISS 260
Query: 300 GKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEG 358
G + R A P LS GRV + GDAAG + + EGI FA +SGR+ E +
Sbjct: 261 GHLTRCRADDSP-------LSRGRVLVCGDAAGLLEPWTREGISFALRSGRLAGEWAVRI 313
Query: 359 SE 360
+E
Sbjct: 314 AE 315
>gi|73670860|ref|YP_306875.1| geranylgeranyl reductase [Methanosarcina barkeri str. Fusaro]
gi|121723332|sp|Q465Z7.1|GGR_METBF RecName: Full=Digeranylgeranylglycerophospholipid reductase;
Short=DGGGPL reductase; AltName:
Full=2,3-di-O-geranylgeranylglyceryl phosphate
reductase; AltName: Full=Geranylgeranyl reductase;
Short=GGR
gi|72398022|gb|AAZ72295.1| 2,3-di-O-geranylgeranylglyceryl phosphate reductase [Methanosarcina
barkeri str. Fusaro]
Length = 407
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 149/342 (43%), Gaps = 34/342 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEF-DLPLDIID 109
V VIG GPAG AA T A+ G++ LIE++ + P C + + ++ ++ I
Sbjct: 7 VLVIGAGPAGSIAARTAAEKGLDVLLIEKRQEIGDPVRCAEGVNKAYLKKYVEIDKRWIC 66
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----INGL 164
++ + +P +++ + L E ++ R+V D L E+A + GA V GL
Sbjct: 67 ADLSASHIYAPDGTKIEMAEELSGGEVGYVLERKVFDRALAEKAAEAGAEVRVKTRATGL 126
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDY 224
++ D + + +G++ + VIGADG S+V +
Sbjct: 127 IIEDDFVKGARLMH-------------LGKEYDVRAKIVIGADGVESKVGRWAGIDTSLK 173
Query: 225 AIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHK-GDI 282
I + + ++ E Y+G++++P Y WVFPK D A VG G + K G
Sbjct: 174 PIDIETCAQYLIAGANIDQHHCEFYIGNEIAPCGYIWVFPKGDGKANVGIGVLGSKTGKF 233
Query: 283 KKFQLATRNR-AKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEG 340
K + N+ ++K +I+ + +P + S + L+GDAA +G G
Sbjct: 234 KPRPVDYLNKFLENKFPDARIVEMVFGGVPVSGSIEKTSTNGLMLIGDAARQSDPITGGG 293
Query: 341 IYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTY 382
I A +G+M EA I GD+ LEK ++ Y
Sbjct: 294 ILNAMNAGKMAGEA-------AYAAISAGDVS--LEKLEEVY 326
>gi|373458355|ref|ZP_09550122.1| geranylgeranyl reductase [Caldithrix abyssi DSM 13497]
gi|371720019|gb|EHO41790.1| geranylgeranyl reductase [Caldithrix abyssi DSM 13497]
Length = 400
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 135/336 (40%), Gaps = 41/336 (12%)
Query: 45 KLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFD 102
K + V V+G G AG AA LA+ G+ L+E+ K CGG F
Sbjct: 3 KAEKQTFEVIVVGAGIAGSLAARLLAQKGISVLLLEKDDYAGKTKACGGLFDRSYFERFV 62
Query: 103 LPLDIIDRKVTKMKMISP-SNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVI 161
II++++ K P +V D Q V+R + D +L + A+K GA ++
Sbjct: 63 GDERIIEQRIRKNIFHLPWGDVTYDCDQV--------TVKRRIFDRHLAQEAKKAGAVLM 114
Query: 162 NGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDA--VIGADG------ANSRV 213
N + + ++P E + T +G R +V A ++ ADG N
Sbjct: 115 N---RQKVISFEVKKP-----GEVEATVKEMGSDRLWQVRASIILLADGPHSVAFQNPFF 166
Query: 214 AKSINAGDYDYAIAFQER-VKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVG 272
+ + + YA ++ + V +P N A +Y + YGW+FP VG
Sbjct: 167 KRQLKKKYWAYAQVYEVKGVALP-------RNEAHIYFSPRLYRWGYGWIFPYKKESNVG 219
Query: 273 TGTVTH---KGDIKK--FQLATRNRAKDKILGGK-IIRVEAHPIPEHPRPRRLSGRVALV 326
G + K +K+ F+ +L G+ I+ + IP R ++
Sbjct: 220 VGAILSELAKRPLKQKLFEFLRIFPQTAPLLKGRPIVDKKGGYIPMWLLNRLSDDSQLVL 279
Query: 327 GDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENG 362
GDA G V+ G GI +A ++ C + ++G
Sbjct: 280 GDAGGMVSPLFGAGINYAMEAAEACVPVVQNALKSG 315
>gi|385777153|ref|YP_005649721.1| FAD dependent oxidoreductase [Sulfolobus islandicus REY15A]
gi|323475901|gb|ADX86507.1| FAD dependent oxidoreductase [Sulfolobus islandicus REY15A]
Length = 395
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 150/338 (44%), Gaps = 52/338 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPLCMVGEFDLPLDI---- 107
+ V+G GPAG +AA T A+ G + L+ER + K GA + + +F DI
Sbjct: 5 IVVVGAGPAGSSAAITAARGGAKVLLLERGPEPGSKNVSGA--MIRLEDFSSVYDIASIP 62
Query: 108 IDRKVTKMKMISPSN-----VAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVIN 162
I+RKV + +I SN ++V++ L V R LD ++ ++AEK GA +I
Sbjct: 63 IERKVKNVDLILLSNSNRTRISVNVESNL------ATVARLKLDKWMAQQAEKAGALLIT 116
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAG-- 220
+ + + R + Y E D GE R D V+ A+G N+ V+ N
Sbjct: 117 KTTV-LGVEREGNE----YKVETDR-----GEVRA---DRVVLAEGVNALVSIKANIRPD 163
Query: 221 -DYDYAIAFQERVKIPDEKMVYY--------ENLAEMYVGDDVSPDFYGWVFPKCDHVAV 271
D+A+ + V ++ V E ++ +G D P + G+++ D VA+
Sbjct: 164 LTPDHAVQTVKEVYSLNKDEVNKRFGFKADDEGVSWRILGTDPVP-YAGFLYVYKDAVAI 222
Query: 272 GTGT---VTHKGDIKKF----QLATRNRAKDKILGGKIIRVEAHPIPEH--PRPRRLSGR 322
G G + K I + ++ R + + G + A IPE+ P + SG+
Sbjct: 223 GAGIPMKILIKRKITPYTVLDEVKERLGFNELVKGASLREYSAKVIPEYGFPSWKACSGK 282
Query: 323 VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
V L GDA G V + GI A SG + +A +E E
Sbjct: 283 VYLAGDAIGLVDPLTFNGIGPAVASGVVAGKAALESYE 320
>gi|373495626|ref|ZP_09586182.1| hypothetical protein HMPREF0402_00055 [Fusobacterium sp. 12_1B]
gi|371967662|gb|EHO85131.1| hypothetical protein HMPREF0402_00055 [Fusobacterium sp. 12_1B]
Length = 355
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 138/316 (43%), Gaps = 33/316 (10%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDN-----CKPCGGAIPLCMVGEFDLPLDI 107
+ VIGGGPAG + + L R ++ K CGG + E L
Sbjct: 5 IVVIGGGPAGSVFSRFIDSKYKVLLLDRRDYEDENNKVIKCCGG----LLAHEAQAALSG 60
Query: 108 IDRKVTKMKMISPS--NVAV-DIGQTLKPHEYIGMVR--REVLDAYL-RERAEKNGASVI 161
+ ++K ++SP NV V D L+ Y + RE D++L +RA ++
Sbjct: 61 LGYSLSKDVLVSPQVFNVQVIDYDNNLRKKYYKNYLNFDREKFDSFLLSQRAPH--VELV 118
Query: 162 NGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGD 221
G + +D + Y + Y + G+ K+ ++ +I A+GANS + K+I+
Sbjct: 119 KGALV-IDYSEDENGIYTVVY------RMGMDIKK-VKTKMIISAEGANSLIRKNIDRNS 170
Query: 222 YDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD 281
+ IA Q RV E Y+ M + D ++Y W+ PK + + +GT K
Sbjct: 171 VNDYIAIQ-RVYKMKEDFSYH-----MAIFDKNINNYYSWMVPKGEELILGTIMKKGKDC 224
Query: 282 IKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR--VALVGDAAGYVTKCSGE 339
+F + + I IIR E I L G+ +AL+G+AAG ++ S E
Sbjct: 225 WDRFHKLEQRVKSEGINLDDIIRDEGTFIKVPKWNEYLMGKDKIALIGEAAGLISSSSSE 284
Query: 340 GIYFAAKSGRMCAEAI 355
GI +A SG A++I
Sbjct: 285 GISYALISGYYLADSI 300
>gi|359462052|ref|ZP_09250615.1| geranylgeranyl reductase family protein [Acaryochloris sp. CCMEE
5410]
Length = 376
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 138/343 (40%), Gaps = 48/343 (13%)
Query: 69 LAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLD-IIDRKVTKMKMISPSNVAVD 126
LAK G ++E++ L KPCGG + + FD I KV ++ N+
Sbjct: 20 LAKKGRSVLVLEKETLPRYKPCGGGVSPVVADWFDFDFSPAISLKVKTVRYT--WNMEDV 77
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGA-----SVINGLFMKMDLPRNFEQPYVLY 181
+ L+ E I MVRR++ D +L ++A+K GA + + G+ + D
Sbjct: 78 VLADLQTPEPIWMVRRDIFDHFLIQQAQKQGAELRDNTTVTGIEFQSD------------ 125
Query: 182 YTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVK-----IPD 236
+ + + G V K +I ADGA +A+ + F+ER + +
Sbjct: 126 HWQVNTANGPVSGKY------LIAADGAKGPMAR---------WLGFKERKRQLGGALEA 170
Query: 237 EKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDK 296
E M EN ++ + + Y W FPK D ++G G G+ + + +K
Sbjct: 171 EAMTEIENPDTVHFEFGLVKNGYIWNFPKVDGYSIGIGAF-RGGERQDLRAIVTEYSKMF 229
Query: 297 ILGGKIIRVEAHPIPEHPRPRRLSGRVA-LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
+ IR HP+ + L + A L G+AA V + EGI + SG +EAI
Sbjct: 230 GVDFTSIRQHGHPLCLWNGDQTLHTQQAILAGEAACVVDPFTAEGIRPSMFSGLKASEAI 289
Query: 356 IEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398
+D KY E + K L VFYR
Sbjct: 290 DHALSGQNDALD-----KYSEVMATEWGGEMKWAQRLASVFYR 327
>gi|383819476|ref|ZP_09974748.1| geranylgeranyl reductase [Mycobacterium phlei RIVM601174]
gi|383336905|gb|EID15299.1| geranylgeranyl reductase [Mycobacterium phlei RIVM601174]
Length = 394
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 152/371 (40%), Gaps = 49/371 (13%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPLDIID-- 109
+ + GGGP+G AAA A+ G + ++++ + KPCG + V + + + D
Sbjct: 7 LVIAGGGPSGSAAAWQAAQTGAKVVVLDKAEFPRPKPCGDGLTARAV-SYLQKMGLADEV 65
Query: 110 ---RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFM 166
+V ++ + SPS + + ++ V RE LD L + AE GA V G +
Sbjct: 66 ATYHRVNRVTVFSPSEWELSFPKRPGMPDHGHTVSRERLDTTLLKHAESAGAEVRQGAEV 125
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINA-GDYDYA 225
+ E V+ T G K + DAVI ADGA S + +++ +Y+
Sbjct: 126 AGPI---VENGRVVGVTLKSGEK--------VFGDAVIAADGAYSPIKRALKIDSEYNGY 174
Query: 226 IAFQERVKIP------DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHV-AVGTGTVTH 278
A R ++P D +Y L ++ GD + YGWVFP + + +G G V
Sbjct: 175 SAIAIRSEMPANRPDSDSLDIY---LKLVFEGDQLP--GYGWVFPMGNGLFNIGLGYVNS 229
Query: 279 KGDIKKFQ--------LATRNRAKD-----KILGGKIIRVEAHPIPEHPRPRRLSGRVAL 325
+ +K L + R D ++ K +R P+ P G V
Sbjct: 230 YKNWQKINATQFLGEFLRSLPREWDLPPIEELKKNKSVRAWRLPMGFTAWPPWRPG-VLF 288
Query: 326 VGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPT 385
GD+ G SG GI A +SG E I ENG D Y ++ + +
Sbjct: 289 TGDSLGAGKPASGAGISKALESGLAAGECAIMALENG----GPDDFTNYAQRMEAAWGKE 344
Query: 386 YKVLDVLQKVF 396
Y+ ++ K+
Sbjct: 345 YRRGRIMHKLI 355
>gi|340785383|ref|YP_004750848.1| geranylgeranyl reductase [Collimonas fungivorans Ter331]
gi|340550650|gb|AEK60025.1| Geranylgeranyl reductase [Collimonas fungivorans Ter331]
Length = 402
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 125/312 (40%), Gaps = 49/312 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLDIIDRK 111
V V+G GPAG A LA+ G+ +I+++ K CGG + RK
Sbjct: 21 VLVVGAGPAGSHLAYLLAEQGLRVTIIDKQAFPRAKVCGGGL---------------SRK 65
Query: 112 VTKMKMISPSNVAVDIGQTLKPHEYIG--MVRREVLDAYLRERAEKNGASVINGLFMKMD 169
+ + D+G + H IG ++ DA L+E +V+ F ++
Sbjct: 66 AMDL-------LGFDLGPAM--HRAIGGAILNYRNRDAILKEVEPMAACTVVRSEFDQLL 116
Query: 170 LPRNFEQPY-VLYYTEY-DGTKGGVGEKRTLEVDAVI-----GADGANSRVAKSINAGDY 222
L R + L T + D T+G T + ADGA S V + D
Sbjct: 117 LDRACAKGVRFLAETAFVDATEGADAVSVTTSRGLLRCRLLLAADGAASAVRNKLFGKDL 176
Query: 223 DYAIAFQERVKIPDEKMVYYENLAEMYVGD-DVSPDFYGWVFPKCDHVAVGT----GTVT 277
+ E P + E + + D D P YGW+FPK DH VG G
Sbjct: 177 VAYVPAMEATVWPAPGTL--ERFGDRALFDFDGMPRGYGWIFPKRDHFNVGVYSPFGGTA 234
Query: 278 HKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL--SGRVALVGDAAGYVTK 335
+ + +F A + + + + + IP R R+L GRV L+GDAAG
Sbjct: 235 LRQHLDRFIAAYASLQQPSR-----VEYQGYVIPLQNR-RQLYQRGRVWLLGDAAGLAEA 288
Query: 336 CSGEGIYFAAKS 347
GEGIYFA KS
Sbjct: 289 LFGEGIYFALKS 300
>gi|440703438|ref|ZP_20884376.1| geranylgeranyl reductase family protein [Streptomyces
turgidiscabies Car8]
gi|440275148|gb|ELP63608.1| geranylgeranyl reductase family protein [Streptomyces
turgidiscabies Car8]
Length = 414
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 121/301 (40%), Gaps = 43/301 (14%)
Query: 77 FLIER-KLDNCKPCGGAI--PL--CMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTL 131
L+E+ +L K CGG I P + F+LP ++ ++ SN
Sbjct: 53 LLLEKAELPRYKTCGGGIIGPSRDSLPPGFELPFR------DRVHAVTFSNNGRFTRTRR 106
Query: 132 KPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK------MDLPRNFEQPYVLYYTEY 185
G++ R D L E A+K GA + G+ + +P VL
Sbjct: 107 SKQMLFGLINRPEFDQQLVEHAQKAGAELRTGVAVSRVEQHGSAVPDRRTVALVL----- 161
Query: 186 DGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENL 245
+GG T+ AV+GADG+ SR+ + + + + +P + V +
Sbjct: 162 ---QGG----ETVLARAVVGADGSASRIGAHVGVKLDQVDLGLEAEIPVP--QTVAEDWQ 212
Query: 246 AEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQL----ATRNRA--KDKILG 299
+ + P YGWVFPK D + VG + +G K L A A + I
Sbjct: 213 GRVLIDWGPMPGSYGWVFPKGDTLTVGVISARGEGAATKRYLEDFIARLGLAGFEPSISS 272
Query: 300 GKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGS 359
G + R A P GRV + GDAAG + + EGI FA +SGR+ E + +
Sbjct: 273 GHLTRCRADDSPLS------RGRVLVCGDAAGLLEPWTREGISFALRSGRLAGEWAVRIA 326
Query: 360 E 360
E
Sbjct: 327 E 327
>gi|150401771|ref|YP_001325537.1| geranylgeranyl reductase [Methanococcus aeolicus Nankai-3]
gi|150014474|gb|ABR56925.1| geranylgeranyl reductase [Methanococcus aeolicus Nankai-3]
Length = 392
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 138/348 (39%), Gaps = 32/348 (9%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
N V ++GGGPAG E + + V + + C G I V E P ++
Sbjct: 5 NYDVIIVGGGPAGCITGENIKNHKVLIIEEHQCIGTPLQCAGLISTNGVKELGAPRGCVN 64
Query: 110 RKVTKMKMISPSNVAVDIGQT-LKPHEYIGMVRREVLDAYLRERAEKNGASVI----NGL 164
K I N + +G ++ Y R+V+D + RA KN I +G
Sbjct: 65 D--IKGAYIYSQNKVIKVGNNKIRAKVY----ERKVMDKDIAIRASKNKNVDILLKAHGQ 118
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDY 224
++ D +N + + Y + G K ++GADGA S + KS N
Sbjct: 119 IIE-DKNKN-KSRFFNKNNNYGLSINHDGNKYNAFPKIIVGADGAKSFIGKSANI----- 171
Query: 225 AIAFQERVKIPDEKMVYYE---NLAEMYVGDDVSPDFYGWVFPKC-DHVAVGTGTVTHKG 280
+ +E + +M + + +++ + DF+ W+ P D V VG ++
Sbjct: 172 -VKKREILAGAQLEMANVDIDTDFVHVFIDNRYCKDFFIWIIPMGKDRVRVGLCDSSNSY 230
Query: 281 DIKKFQLATRNRAKDKILGGKI-IRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGE 339
+ K + +L + I +P + + LVGD+AG + SG
Sbjct: 231 N-KLLNFINNHPIASNLLKNAVPIEFSVGTLPIGYNKSSVKNNLMLVGDSAGQIKPISGG 289
Query: 340 GIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYK 387
G+Y+ AKS ++C E I T + E YL+ +DK + +K
Sbjct: 290 GLYYGAKSAKICGEII-------TNYLSEELPVNYLKNYDKQWKQQFK 330
>gi|294495914|ref|YP_003542407.1| 2,3-di-O-geranylgeranylglyceryl phosphate reductase
[Methanohalophilus mahii DSM 5219]
gi|292666913|gb|ADE36762.1| 2,3-di-O-geranylgeranylglyceryl phosphate reductase
[Methanohalophilus mahii DSM 5219]
Length = 396
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 131/323 (40%), Gaps = 32/323 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLC-----MVGEFDLPL 105
V V+G GPAG AA A+ G L++RK D P CGG +P +V + LP
Sbjct: 9 VVVVGAGPAGSTAAMYAAQGGASVLLVDRKKDIGVPLQCGGFMPHADTLQELVPDAHLPH 68
Query: 106 DIIDRKVTKMKMISPSNVAVDIGQTLKPHEY-IGMVRREVLDAYLRERAEKNGASVINGL 164
++D + + S + K E + R D +L RA + GA + G
Sbjct: 69 TLLDYPKSCVHATSNYQRFIAPDGYSKGFEVEADSLDRRRFDRHLASRAAEEGAEFMVGT 128
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDY 224
+ D+ N + DG G T+ +IGADG NS VAK+
Sbjct: 129 NVT-DVSGN--------TIKVDGVFG----PSTIMGKVLIGADGPNSIVAKAHGMTREHD 175
Query: 225 AIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTG--------T 275
+ + + EMY G D P Y W+ + + A +G G
Sbjct: 176 PMGIGTAFEYELANTKADRDAVEMYFGKDYVPGGYAWIISQGGNTANIGVGIREVLFEKN 235
Query: 276 VTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRR-LSGRVALVGDAAGYVT 334
+ + ++ F + A DK+ +I+ V + +P P + +S V L GDAAG +
Sbjct: 236 MCARDYLENF-MYKHPIAADKLQDARILSVVSGVVPVGGAPEKTVSNNVMLAGDAAGQLI 294
Query: 335 KCSGEGIYFAAKSGRMCAEAIIE 357
+G GI A G++ E +E
Sbjct: 295 ATNGGGIPTAMIGGKLAGETAVE 317
>gi|427712196|ref|YP_007060820.1| geranylgeranyl reductase [Synechococcus sp. PCC 6312]
gi|427376325|gb|AFY60277.1| geranylgeranyl reductase family protein [Synechococcus sp. PCC
6312]
Length = 378
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 130/295 (44%), Gaps = 34/295 (11%)
Query: 69 LAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLD-IIDRKVTKMKMISPSNVAVD 126
LAK G ++E++ L KPCGG + + FD I K+ ++ V+
Sbjct: 20 LAKRGRSVLVLEKETLPRYKPCGGGVSPQVAQWFDFDFSPAISLKLRSVRYTWNKEDPVE 79
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
+ L E I MVRR+V D +L ++A+ GA + +G E + +++++
Sbjct: 80 V--ELASQEPIWMVRRDVFDHFLIKQAQLQGAELRDGT----------EVLGISWHSDHW 127
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVK-----IPDEKMVY 241
K G +E +I ADG ++A+ + F+ER + + E V
Sbjct: 128 EIKTSAG---LIEGKYLIAADGGKGKLAQ---------LLGFKERKRRLAGALEAEAPVE 175
Query: 242 YENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGK 301
+++ A ++ + + Y W FPK D +VG GT G+ + F+ +N A L
Sbjct: 176 HQDHA-VHFEFGLVKNGYIWNFPKADGYSVGIGTF-RGGEPQDFKNILQNYATLFNLDIS 233
Query: 302 IIRVEAHPIPEHPRPRRLSGRVALV-GDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
R HPI ++L + AL+ G+AA V S EGI + SG AI
Sbjct: 234 QARQYGHPICLWDGKQKLHTQNALLAGEAACVVDPFSAEGIRPSMYSGMQAGLAI 288
>gi|297197793|ref|ZP_06915190.1| hydrogenase [Streptomyces sviceus ATCC 29083]
gi|297146870|gb|EDY60652.2| hydrogenase [Streptomyces sviceus ATCC 29083]
Length = 435
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 122/304 (40%), Gaps = 63/304 (20%)
Query: 77 FLIER-KLDNCKPCGGAI--PL--CMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTL 131
L+E+ +L K CGG I P + F+LP ++ ++ SN
Sbjct: 62 LLLEKAELPRYKTCGGGIIGPSRDALPPGFELPFR------DRVHAVTFSNNGRFTRTRR 115
Query: 132 KPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGG 191
G++ R D L E A+K GA + G+ ++ E G+
Sbjct: 116 SKQMLFGLINRPEFDQQLVEHAQKAGAELRTGVTVQ--------------RVEQHGSA-- 159
Query: 192 VGEKRTLEV----------DAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVY 241
V ++RT+ V AV+GADG+ SR+ + + + + +P
Sbjct: 160 VPDRRTVAVLLQGGETVLARAVVGADGSASRIGAHVGVKLDQVDLGLEAEIPVP------ 213
Query: 242 YENLAEMYVGDDV-----SPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLAT------R 290
E +AE + G + P YGWVFPK D + VG + +G K L
Sbjct: 214 -ETVAEDWKGRVLIDWGPMPGSYGWVFPKGDTLTVGVISARGEGAATKRYLEDFVGRLGL 272
Query: 291 NRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
+ I G + R A P LS GRV + GDAAG + + EGI FA +SGR
Sbjct: 273 AGFEPSISSGHLTRCRADDSP-------LSRGRVLVCGDAAGLLEPWTREGISFALRSGR 325
Query: 350 MCAE 353
+ E
Sbjct: 326 LAGE 329
>gi|441161633|ref|ZP_20967973.1| geranylgeranyl reductase [Streptomyces rimosus subsp. rimosus ATCC
10970]
gi|440616693|gb|ELQ79822.1| geranylgeranyl reductase [Streptomyces rimosus subsp. rimosus ATCC
10970]
Length = 401
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 124/313 (39%), Gaps = 57/313 (18%)
Query: 72 NGVETFLIER-KLDNCKPCGGAI--PL--CMVGEFDLPLDIIDRKVTKMKMISPSNVAVD 126
G L+E+ +L K CGG I P + FDLPL ++ ++ S
Sbjct: 35 TGRRVLLLEKAELPRYKTCGGGIIGPSRDALPPGFDLPLR------DRVHAVTFSLNGKL 88
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
H G++ R DA L + A+ GA + G+ + E
Sbjct: 89 TRTRRSKHMLFGLINRPEFDAQLVKTAQDAGAELRTGV--------------TVSRVEQH 134
Query: 187 GTKGGVGEKRTLEV----------DAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPD 236
G+ V ++RT+ V AV+GADG+ R+ + + + + +P
Sbjct: 135 GSA--VPDRRTVAVVLGDGEVVLARAVVGADGSAGRIGAHVGVKMDQVDLGLEAEIPVP- 191
Query: 237 EKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD---------IKKFQL 287
V + + V P YGWVFPK D + VG + +G I + L
Sbjct: 192 -PTVAEDWAGRVLVDWGPIPGSYGWVFPKGDTLTVGVISARGEGAATKRYLDDFIGRLGL 250
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
A + I G + R A + P R GRV + GDAAG + + EGI FA +S
Sbjct: 251 AG---FEPSISSGHLTRCRAD---DSPLSR---GRVLVCGDAAGLLEPWTREGISFALRS 301
Query: 348 GRMCAEAIIEGSE 360
GR+ E + SE
Sbjct: 302 GRLAGEWAVRVSE 314
>gi|373859403|ref|ZP_09602132.1| Electron-transferring-flavoprotein dehydrogenase [Bacillus sp.
1NLA3E]
gi|372450902|gb|EHP24384.1| Electron-transferring-flavoprotein dehydrogenase [Bacillus sp.
1NLA3E]
Length = 431
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 147/361 (40%), Gaps = 55/361 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPL-----CMVGEF--DLP 104
V V+G GPAG + A T AKNG++ IER + K G + ++ EF + P
Sbjct: 7 VIVVGAGPAGTSCAYTCAKNGLKVLHIERGEYPGSKNVMGGVLYRKQMEEIIPEFWKEAP 66
Query: 105 LD--IIDRKVTKM---KMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGAS 159
L+ ++++K M ++S ++ Q +P+ ++R D + +A K G+
Sbjct: 67 LERPVVEQKFWMMDKESVLSFGYKGLEWAQ--EPYNNFTVLRAH-FDQWFAAQAVKVGSL 123
Query: 160 VINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKR---TLEVDAVIGADGANSRVAKS 216
+I + + N G GV R + D V+ ADG NS + K
Sbjct: 124 LICETVVTECIVEN-------------GQVIGVKTDRPNGEILADVVVLADGVNSLLGKQ 170
Query: 217 INAGDY----DYAIAFQERVKIPDEKMVYYENLAEM------YVGDDVSPDF-YGWVFPK 265
+ + A+ E V +P EK+ NL E GD + +++
Sbjct: 171 LGFHKEFRPDEVALTVMEVVNLPKEKINDRFNLEENQGCTIEIFGDSTKGNLGTAFLYTN 230
Query: 266 CDHVAVGTGTVTH---KGDIKKFQL----ATRNRAKDKILGGKIIRVEAHPIPE---HPR 315
+ + +G GT K +K + L T K + GG+ AH IPE H
Sbjct: 231 KESLNIGVGTTLSSMIKAKLKPYDLLDYLKTHPMVKPFLEGGESAEYLAHLIPEGGYHSV 290
Query: 316 PRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYL 375
P+ + V +VGDAA V EG A SG+M A AI++ E L Y
Sbjct: 291 PKVIGNGVLVVGDAAQLVNAIHREGSNMAMSSGKMAAHAIVKAKHEND--FSEAGLSSYK 348
Query: 376 E 376
E
Sbjct: 349 E 349
>gi|315231678|ref|YP_004072114.1| geranylgeranyl reductase [Thermococcus barophilus MP]
gi|315184706|gb|ADT84891.1| geranylgeranyl reductase [Thermococcus barophilus MP]
Length = 371
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 129/312 (41%), Gaps = 35/312 (11%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
+ +IGG G A LA++ + + K C G I E LP D I K+
Sbjct: 5 IVIIGGSVVGSYLATLLARHYRIAVIEAKSSFGGKACTGIIGAKSYEELKLPKDAIINKL 64
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-INGLFMKMDLP 171
S + +I + +P Y MV R++L+ L ERA K GA +N F+
Sbjct: 65 RGAVFYSKIQ-SFEIERK-EPQAY--MVDRKILEKSLAERAVKRGAEYYMNTRFLGFRNG 120
Query: 172 RNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINA-GDYDYAIAFQE 230
+ Q + ++ + D IGADG NS+VA+ I A ++ ++
Sbjct: 121 KAVLQRF--------------NDRFEINADFYIGADGVNSKVAQEIGAKTKAEFLSGYEV 166
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATR 290
+ EK + E++V +++ DF+ WV P + +A GT + F A
Sbjct: 167 EIVGEFEK----PDFVELWVNKELNEDFFFWVAPINESLA-RVGTFGRLDALFNFIRARM 221
Query: 291 NRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRM 350
+ + I+ +A + R + G VALVGDAA + + GI + G
Sbjct: 222 LKETN------IVEFKAGSVALGVRKPWVKGNVALVGDAALQIKPLTAGGIAY----GMY 271
Query: 351 CAEAIIEGSENG 362
CA A+ NG
Sbjct: 272 CAYALAYSLING 283
>gi|337285339|ref|YP_004624813.1| geranylgeranyl hydrogenase [Pyrococcus yayanosii CH1]
gi|334901273|gb|AEH25541.1| geranylgeranyl hydrogenase [Pyrococcus yayanosii CH1]
Length = 371
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 134/315 (42%), Gaps = 55/315 (17%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPLCMVGEFDLPLDIIDRK 111
V +IGGGP G A LA + ++E+K K C G I LP D I K
Sbjct: 5 VLIIGGGPVGNYLAYLLAGD-FRVAVVEKKGSFGGKACTGIIGAESFERLGLPKDAILNK 63
Query: 112 VTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLP 171
+ S + + P Y +V R++L+ L E+A + GA
Sbjct: 64 FRGA--VFYSRIRSFEVERKAPQAY--LVDRKILEKTLAEKAIRRGAE------------ 107
Query: 172 RNFEQPYVLYY--TEYDGTKGG------VGEKRTLEVDAVIGADGANSRVAKSINA-GDY 222
YY T + G + G +G++ +E IGADG NS VAK+I A
Sbjct: 108 ---------YYMATTFIGFRNGRAVLQHLGKEFEVEATFYIGADGVNSAVAKAIGARTRA 158
Query: 223 DYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGT-GTVTHKG 280
++ F+ V + D ++ E++V D++PDF+ WV P + +A VGT G+V
Sbjct: 159 EFLTGFEVEV-VGD---FSRKDFVEVWVNKDMNPDFFFWVAPVNEGLARVGTFGSVDALA 214
Query: 281 DIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEG 340
K ++ ++ ++ + R + G VAL+GDAA + + G
Sbjct: 215 RFLKVRMLKPE---------AVVEFKSGVVGFGTRRPWVRGNVALIGDAALQIKPTTAGG 265
Query: 341 IYFAAKSGRMCAEAI 355
I F G +CA A+
Sbjct: 266 IVF----GMVCAHAL 276
>gi|289207828|ref|YP_003459894.1| geranylgeranyl reductase [Thioalkalivibrio sp. K90mix]
gi|288943459|gb|ADC71158.1| geranylgeranyl reductase [Thioalkalivibrio sp. K90mix]
Length = 360
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 135/325 (41%), Gaps = 33/325 (10%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDIIDR 110
V V+G GP G +AA A G+ +ER +P C IP M G + ++ +
Sbjct: 8 VLVVGLGPGGASAARVCAAAGLSVLAVERNKAFGEPVQCAEFIPNPM-GAYARAEGVLLQ 66
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIG-MVRREVLDAYLRERAEKNGASVINGL-FMKM 168
++ M+ PS T++ ++ G MV R D + + A+ NGA ++ ++
Sbjct: 67 RIDSMQSFLPSG-------TVEHSDFPGLMVDRGEFDRAIIQAAQANGAQLVTSTPLQRV 119
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
D R+ T G++ +E +I ADG +S VA+S+ G +
Sbjct: 120 DAERHV------------ATVKHQGQEHRVEYRVLIAADGPHSPVAESL--GLPALPVVQ 165
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLA 288
+ +P +K ++++ DD P Y W+FPK + +G G + K L
Sbjct: 166 TRQYTVPLKKPY---TATDVWLSDDY-PGGYAWLFPKGEWANLGLGADKRIDNDMKTPLE 221
Query: 289 TRN--RAKDKILGGKIIRVEAHPIPEHP-RPRRLSGRVALVGDAAGYVTKCSGEGIYFAA 345
+ + + +LG +I IP R G V VGDA G+ +G GI A
Sbjct: 222 SLHVQLVEQGLLGEEIRHRTGGAIPVGGLRDSLYQGDVLFVGDAGGFTHPITGAGIAAAV 281
Query: 346 KSGRMCAEAIIEGSENGTRMIDEGD 370
SG EA I E D+ D
Sbjct: 282 VSGEAAGEAAIGHLEGDAEAFDDYD 306
>gi|373248698|emb|CCD31811.1| putative hydrogenase [Streptomyces albus subsp. albus]
Length = 400
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 100/246 (40%), Gaps = 48/246 (19%)
Query: 137 IGMVRREVLDAYLRERAEKNGASVINGLFMKM------DLPRNFEQPYVLYYTEYDGTKG 190
G+V R D L E A+K GA + G + ++P VL E
Sbjct: 99 FGLVNRAEFDHLLVEHAQKAGAELRTGATVARVEQHGPEVPDRRTVAVVLQSGE------ 152
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYV 250
T+ +V+GADG+ SR+ + + + + +P +AE +
Sbjct: 153 ------TVLARSVVGADGSASRIGAHVGVKLRQVDLGLEAEIPVP-------PTVAEDWA 199
Query: 251 GD---DVSP--DFYGWVFPKCDHVAVGTGTVTHKGD---------IKKFQLATRNRAKDK 296
G D P YGWVFPK D + VG + +G I + LA +
Sbjct: 200 GRALIDWGPLQGSYGWVFPKGDTLTVGVISARGEGGATKRYLEDFIARLGLAGFT---PE 256
Query: 297 ILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAII 356
+ G + R + P R GRV + GDAAG + + EGI FA +SGRM E +
Sbjct: 257 VSSGHLTRCRTE---DSPLSR---GRVLVCGDAAGMLEPWTREGISFALRSGRMAGEWAV 310
Query: 357 EGSENG 362
+E+G
Sbjct: 311 RLAESG 316
>gi|240102090|ref|YP_002958398.1| Geranylgeranyl reductase [Thermococcus gammatolerans EJ3]
gi|239909643|gb|ACS32534.1| Geranylgeranyl reductase [Thermococcus gammatolerans EJ3]
Length = 370
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 127/317 (40%), Gaps = 50/317 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPLCMVGEFDLPLDIID-- 109
V +IGGGP G A+ LA ++ ++E+K K C G I P + +
Sbjct: 5 VLIIGGGPVGNYLAKLLAGK-LDVAVVEKKRSFGGKACTGIIGRESFERLGFPEEAVLNS 63
Query: 110 -RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
R I +A Q YI V R+ L+ L E A K GA G
Sbjct: 64 LRGAVFRSRIQSFEIARKSAQA-----YI--VDRKTLERKLAEEAVKRGADYFIG----- 111
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGE----KRTLEVDA--VIGADGANSRVAKSINA-GD 221
T + G +GG K T EV A +GADG S VA+ I A +
Sbjct: 112 --------------TTFTGFRGGRARLQHLKETFEVSADFYVGADGIASTVAREIGAKSN 157
Query: 222 YDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD 281
++ F+ V++ E + + E++V D++ +F+ WV P D VA GT+
Sbjct: 158 AEFLKGFE--VEVVGE---FRRDFVEVWVNKDLNAEFFCWVAPLSDEVAR-VGTLGSLEA 211
Query: 282 IKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGI 341
+ +F A R I+ +A + R VALVGDAA + + GI
Sbjct: 212 LNRFLRARGLRPTS------ILEFKAGTVGLGWRGPWAKDNVALVGDAALQIKPTTAGGI 265
Query: 342 YFAAKSGRMCAEAIIEG 358
F A A AI+ G
Sbjct: 266 VFGAICAHHLARAILSG 282
>gi|17228704|ref|NP_485252.1| hypothetical protein alr1209 [Nostoc sp. PCC 7120]
gi|17130556|dbj|BAB73166.1| alr1209 [Nostoc sp. PCC 7120]
Length = 373
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 131/315 (41%), Gaps = 40/315 (12%)
Query: 69 LAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLD-IIDRKVTKMKMISPSNVAVD 126
LAK G ++E++ L KPCGG + + FD I KV + N+
Sbjct: 20 LAKKGRSVLVLEKESLPRYKPCGGGVSPIVAEWFDFDFSPAISLKVDSFRFT--WNLGDP 77
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----INGLFMKMDLPRNFEQPYVLY 181
+ ++ E + MVRR+V D +L ++A+K GA + + G+ K D
Sbjct: 78 VEAKIETKEPVWMVRRDVFDHFLVQQAQKQGAELRDNTEVTGIEFKSD------------ 125
Query: 182 YTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVY 241
+ D G V + +I ADGA +AK + + +A ++P
Sbjct: 126 RWQVDTVNGPVTSRY------LIAADGAKGPMAKWLGFKERKRRLAGALEAEVPAN---- 175
Query: 242 YENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGK 301
E+ + ++ + + Y W FPK D ++G GT G + F+ ++ + K
Sbjct: 176 VEDKSTIHFEFGLVKNGYIWNFPKEDGYSIGVGTFI-GGQPQDFKKILVEYSQLFNIDVK 234
Query: 302 IIRVEAHPIPEHPRPRRLSGRVA-LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI----- 355
+ HPI ++L + A L G+AA V + EGI + SG M A A+
Sbjct: 235 TSKQYGHPIALWDGNQKLHTQNAILAGEAACVVDPMTAEGIRPSIYSGVMAAGAVDKALS 294
Query: 356 --IEGSENGTRMIDE 368
I E T +I E
Sbjct: 295 GDINALEQYTEIIHE 309
>gi|257075575|ref|ZP_05569936.1| geranylgeranyl hydrogenase [Ferroplasma acidarmanus fer1]
Length = 396
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 149/366 (40%), Gaps = 62/366 (16%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDI 107
N V VIG GPAG +AA ++ G++T L+E++ D P CG I + E D+ +
Sbjct: 3 NYDVLVIGAGPAGSSAARYASRYGLKTLLVEKRPDIGSPVRCGEGISKAWMPEVDIKPEA 62
Query: 108 --IDRKVTKMKMISPSNVAVDIGQTLKPHEYIG-MVRREVLDAYLRERAEKNGASVINGL 164
I +V ++ PS + +G +V R+ D ++ A GA +
Sbjct: 63 HWISDEVKGARIYGPSEKKPIMLTAESAGNEVGFVVERDKFDKHIATLAATEGADIW--- 119
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGV----GEKRTLEVDAVIGADGANSRVA-----K 215
+ P + E + G GE+ + VI ADG S + K
Sbjct: 120 ---------IKSPAMSVIKEGNRVVGAKIRHNGEEVEVRAKMVIAADGFESEFSRWAGLK 170
Query: 216 SINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTG 274
S D A + R++ D E+ + Y+G ++P Y WVFPK H A VG G
Sbjct: 171 SPILKKNDIISALEYRMENVDSN----EDFTDFYLG-SIAPAGYLWVFPKGPHEANVGIG 225
Query: 275 -TVTHKGD-----------IKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR 322
T+T D IK ++ R +I GG V + + + L G
Sbjct: 226 VTITMMKDRLDVKNYLDSWIKSHPAYSKGRIIQQISGG----VSVNKVKDK---MSLPGL 278
Query: 323 VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEA---IIEGSENGTRMIDEGDL-------R 372
+A +GDAA + +G GI SG+ A+ I+ ++ M+ DL R
Sbjct: 279 LA-IGDAARLIDPITGGGIANGMISGKFAAQVSKKAIDENDFSEEMMKNYDLMVKDKFER 337
Query: 373 KYLEKW 378
K+L W
Sbjct: 338 KHLRNW 343
>gi|126348331|emb|CAJ90052.1| putative hydrogenase [Streptomyces ambofaciens ATCC 23877]
Length = 441
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 123/311 (39%), Gaps = 63/311 (20%)
Query: 77 FLIER-KLDNCKPCGGAI--PL--CMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTL 131
L+E+ +L K CGG I P + F+LP ++ ++ SN
Sbjct: 41 LLLEKAELPRYKTCGGGIIGPSRDTLPPGFELPFR------DRVHAVTFSNNGRFTRTRR 94
Query: 132 KPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGG 191
G++ R D L E A+K GA + G + E G+
Sbjct: 95 SRQMLFGLINRPEFDQQLVEHAQKAGAELRTG--------------ATVTRVEQHGSA-- 138
Query: 192 VGEKRTLEV----------DAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVY 241
V ++RT+ V AV+GADG+ SR+ + + + + +P
Sbjct: 139 VPDRRTVAVVLQGGETVLARAVVGADGSASRIGAHVGVKLDQVDLGLEAEIPVP------ 192
Query: 242 YENLAEMYVGDDV-----SPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLAT------R 290
E +AE + G + P YGWVFPK D + VG + +G K L
Sbjct: 193 -ETVAEDWKGRVLIDWGPMPGSYGWVFPKGDTLTVGVISARGEGAATKRYLEDFVGRLGL 251
Query: 291 NRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
+ I G + R A P LS GRV + GDAAG + + EGI FA +SGR
Sbjct: 252 AGFEPSISSGHLTRCRADDSP-------LSRGRVLVCGDAAGLLEPWTREGISFALRSGR 304
Query: 350 MCAEAIIEGSE 360
+ E + SE
Sbjct: 305 LAGEWAVRISE 315
>gi|374851279|dbj|BAL54244.1| hypothetical conserved protein [uncultured candidate division OP1
bacterium]
gi|374857421|dbj|BAL60274.1| hypothetical conserved protein [uncultured candidate division OP1
bacterium]
Length = 416
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 154/377 (40%), Gaps = 42/377 (11%)
Query: 75 ETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLK 132
L+E +P C G + L L +I R +T + + SP ++G +
Sbjct: 28 HVLLLEEHTQIGRPIQCTGLLSLRGWRLARLSDSLIVRGITGVLVHSPDGAVYELGGD-R 86
Query: 133 PHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGG 191
Y+ + R+ D L ERA K G +V G +++ RN + + T+
Sbjct: 87 VRAYV--IDRDRFDQALVERAVKAGVTVQTGTRAVELGEYRNGTRTLL--------TRTP 136
Query: 192 VGEKRTLEVDAVIGADGANSRVA--------KSINAGDYDYAIAFQERVKIPDEKMVYYE 243
G ++ +I ADGA+S +A K I G A+ R E +
Sbjct: 137 DGARQCFRAPVIIAADGAHSLLAQQAGLPRPKKILLG-LQAALDVHLRQPPAGEGVQSRR 195
Query: 244 NLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKGDIKKFQLATRNRAKDKILGGKI 302
+L E++ G + +F+ W P + A VG T I++ + ++ G+I
Sbjct: 196 SLVEVFFGRRWAANFFAWSVPAAEGTARVGVAT----DQIREARACFERLRQEHHHSGRI 251
Query: 303 IRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENG 362
+ ++ IP P R ++ V +VGDAAG SG GIY G++ E G+ +G
Sbjct: 252 LSYQSGMIPIGPAERTVTDGVLIVGDAAGQAKPTSGGGIYTGMLCGKIAGEVAARGALSG 311
Query: 363 ---TRMIDEGD--LRKYLEKWDKTYWPTYKVLDVL------QKVFYRSNPAREAFVEMCA 411
R + E + R LE+ + +++L L + + PA +E C
Sbjct: 312 KTHARFLAEYERRWRAQLERELSLGFRAHQILTQLSDEQIAHALKLLTIPALRKLIERCG 371
Query: 412 D-EYVQKMTFDSYLYKR 427
D +Y K+ + L KR
Sbjct: 372 DIDYPSKIAHE--LIKR 386
>gi|403713320|ref|ZP_10939437.1| putative geranylgeranyl reductase [Kineosphaera limosa NBRC 100340]
gi|403212406|dbj|GAB94120.1| putative geranylgeranyl reductase [Kineosphaera limosa NBRC 100340]
Length = 436
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 141/325 (43%), Gaps = 36/325 (11%)
Query: 64 AAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVGEFDLPLDIIDRKVTKMKMISPS 121
A A LA +G++ L+E+ + K CG G P + L +D + I
Sbjct: 22 ATAAYLAGHGLDVVLLEKARFPRDKICGDGLTPRAVKELLHLGVDTTGWARNRGLHIQGG 81
Query: 122 --NVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYV 179
++ +D T +Y + RR LD L A GA ++ G+ ++ L +
Sbjct: 82 GHDLTLDWPSTDAFPDYGLVRRRSELDETLARYAAACGARLLEGMNVQAPLRDDRTGRIA 141
Query: 180 LYYTEYDGTKG-GVGEKRTLEVDAVIGADGANSRVAKSINAG---DYDYAIAFQERVKIP 235
+ G G GE+R++ V+ ADG +SR+A ++ D +A + P
Sbjct: 142 GVQVKVMGPDGRATGERRSVLAPVVVAADGVSSRLATALGRPKREDRPMGVAVRAYWDSP 201
Query: 236 DEKMVYYENLAEMYVGDDVSPD------------FYGWVFPKCD---HVAVGT------- 273
+ Y + E++V +D + D Y W+FP D +V +G
Sbjct: 202 RTRDDYISSWLELWVPEDPAADPNDPATKKILMPGYAWLFPTGDGGVNVGLGMLDTSPSF 261
Query: 274 GTVTHKGDIKKFQLATRNRAKDKILGGKI---IRVEAHPIPEHPRPRRLSGRVALVGDAA 330
GTV +K D+ + +AT A+ + + IR A P+ + P G + LVGDA
Sbjct: 262 GTVDYK-DVLRRWIAT-TPAEWTLTPQTMTAPIRGAALPMCFNREPLYADG-LLLVGDAG 318
Query: 331 GYVTKCSGEGIYFAAKSGRMCAEAI 355
G V +GEGI +A ++GR+ AE I
Sbjct: 319 GMVNPFNGEGIDYALQAGRVAAECI 343
>gi|317059039|ref|ZP_07923524.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Fusobacterium sp. 3_1_5R]
gi|313684715|gb|EFS21550.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Fusobacterium sp. 3_1_5R]
Length = 431
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 174/410 (42%), Gaps = 71/410 (17%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC--KPCGGAIPLCMVGEFDL 103
++ ++GGG AG +AA LA G+ ++ER D C K G E +
Sbjct: 1 MSEEKFDAIIVGGGLAGCSAAIVLANAGLAVLVVERG-DFCGAKNMTGGRLYGHSLEKII 59
Query: 104 PLDI----IDRKVTKMKM-ISPSNVAVDIG-------QTLKPHEYIGMVRREVLDAYLRE 151
P I+RK+T+ K+ + + + DIG T + Y V R V D +L
Sbjct: 60 PNFAEEAPIERKITREKISLMSEDGSFDIGFGSKKLSSTNENASY--TVLRSVFDQWLAS 117
Query: 152 RAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEK-RTLEVDAVIGADGAN 210
+AE+ GA +I G+ + + DG GV L D VI ADG N
Sbjct: 118 KAEEAGAEIIPGILVDELIME-------------DGKVVGVSATGEELYADVVILADGVN 164
Query: 211 SRVAKSINAGD----YDYAIAFQERVKIPDEKMVY------YENLAEMYVGD-DVSPDFY 259
S +A+SI + A+ +E +++ ++ + E +A + GD +
Sbjct: 165 SLLAQSIGMKKELEPHQVAVGAKEVIRLGEDVINQRFAVNGEEGVAWLSCGDPTLGGFGG 224
Query: 260 GWVFPKCDHVAVGTGTVTHKGDIKKFQLATR---NRAKDK------ILGGKIIRVEAHPI 310
G ++ D V+V G V DI +L+ +R K+ + GG I H +
Sbjct: 225 GLLYTNKDTVSV--GVVATLSDIGHHELSINQLLDRFKEHPSIAPYLEGGTSIEYSGHLV 282
Query: 311 PE---HPRPRRLSGRVALVGDAAGYVTKC--SGEGIYFAAKSGRMCAEAIIEGSENGTRM 365
PE H P V + GDAAG+ + G+ FA +SGR+ AE +I+ + G
Sbjct: 283 PEEGLHMVPELYRDGVLVTGDAAGFCINLGFTVRGMDFAIESGRLAAETVIKAHQLGDFS 342
Query: 366 IDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPA----REAFVEMCA 411
+ L Y + D ++ ++D L++ Y+ P RE F ++ A
Sbjct: 343 AET--LSDYKKALDNSF-----IMDDLKQ--YKGFPTLLGRREIFEDLPA 383
>gi|229580392|ref|YP_002838792.1| FAD dependent oxidoreductase [Sulfolobus islandicus Y.G.57.14]
gi|229580974|ref|YP_002839373.1| FAD dependent oxidoreductase [Sulfolobus islandicus Y.N.15.51]
gi|228011108|gb|ACP46870.1| FAD dependent oxidoreductase [Sulfolobus islandicus Y.G.57.14]
gi|228011690|gb|ACP47451.1| FAD dependent oxidoreductase [Sulfolobus islandicus Y.N.15.51]
Length = 395
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 150/338 (44%), Gaps = 52/338 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPLCMVGEFDLPLDI---- 107
+ V+G GPAG +AA T A+ G + L+ER + K GA + + +F DI
Sbjct: 5 IVVVGAGPAGSSAAITAARGGAKVLLLERGPEPGSKNVSGA--MIRLEDFSSVYDIASIP 62
Query: 108 IDRKVTKMKMISPSN-----VAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVIN 162
I+RKV + +I SN ++V++ L V R LD ++ ++AEK GA +I
Sbjct: 63 IERKVKNVDLILLSNSNRTRISVNVESNL------ATVARLKLDKWMAQQAEKAGALLIT 116
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAG-- 220
+ + + R + Y E D GE R D V+ A+G N+ V+ N
Sbjct: 117 KTTV-LGVEREGNE----YKVETDR-----GEVRA---DRVVLAEGVNALVSMKANIRPD 163
Query: 221 -DYDYAIAFQERVKIPDEKMVYY--------ENLAEMYVGDDVSPDFYGWVFPKCDHVAV 271
D+A+ + V ++ V E ++ +G D P + G+++ D VA+
Sbjct: 164 LTPDHAVQTVKEVYSLNKDEVNKRFGFKADDEGVSWRILGIDPVP-YAGFLYVYKDAVAI 222
Query: 272 GTGT---VTHKGDIKKF----QLATRNRAKDKILGGKIIRVEAHPIPEH--PRPRRLSGR 322
G G + K I + ++ R + + G + A IPE+ P + SG+
Sbjct: 223 GAGIPMKILIKRKITPYTVLDEVKERLGFNELVKGASLREYSAKVIPEYGFPSWKACSGK 282
Query: 323 VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
+ L GDA G V + GI A SG + +A +E E
Sbjct: 283 IYLAGDAIGLVDPLTFNGIGPAVASGVVAGKAALESYE 320
>gi|417933032|ref|ZP_12576366.1| geranylgeranyl reductase family [Propionibacterium acnes
SK182B-JCVI]
gi|340772951|gb|EGR95446.1| geranylgeranyl reductase family [Propionibacterium acnes
SK182B-JCVI]
Length = 420
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 134/319 (42%), Gaps = 36/319 (11%)
Query: 64 AAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVGEFDLPLDIID---RKVTKMKMI 118
A A LA+ G+ L+E+ K CG G P + L +D+ + K T+ I
Sbjct: 20 ATAAHLARRGLHVALLEKATFPRDKVCGDGLTPRAVKQLIRLGIDVSEGAGWKHTEGLRI 79
Query: 119 SPSNVA--VDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMKMDLPRNFE 175
+VA V L + GMV RR VLD L AE G +++ G N
Sbjct: 80 HGGHVAPFVLPWPVLADYPNFGMVCRRTVLDERLARHAESQGVTLVEGA--------NVT 131
Query: 176 QPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYD---YAIAFQERV 232
+P + G + G + V V+ ADG +SR+ ++ D +A +
Sbjct: 132 EPILDSNGRIRGVRTSDGTQYCAPV--VVAADGNSSRLGLAMGLHKRDDRPMGVAVRAYY 189
Query: 233 KIPDEKMVYYENLAEMYVGDDVSPDF---YGWVFPKCD-HVAVGTGTVTHK---GDIKKF 285
+ + Y ++ E++ G D YGW FP+ D V +G G + G
Sbjct: 190 RSALSESRYLDSWLELWDGAPQKSDLLPGYGWAFPEGDGTVNIGLGMLNSSAAFGHTDYR 249
Query: 286 QLATRNRAK-------DKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSG 338
L TR + D+ IR A P+ + +P G + LVGDA G V +G
Sbjct: 250 SLMTRWLSHLPAEWTFDEEHREGPIRGAALPMAFNRQPHYRDG-LLLVGDAGGMVNPFNG 308
Query: 339 EGIYFAAKSGRMCAEAIIE 357
EGI +A ++G + A+AI E
Sbjct: 309 EGIDYAMEAGELAADAIAE 327
>gi|21219588|ref|NP_625367.1| hydrogenase [Streptomyces coelicolor A3(2)]
gi|289773224|ref|ZP_06532602.1| hydrogenase [Streptomyces lividans TK24]
gi|8744966|emb|CAB95292.1| putative hydrogenase [Streptomyces coelicolor A3(2)]
gi|289703423|gb|EFD70852.1| hydrogenase [Streptomyces lividans TK24]
Length = 422
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 125/310 (40%), Gaps = 61/310 (19%)
Query: 77 FLIER-KLDNCKPCGGAI--PL--CMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTL 131
L+E+ +L K CGG I P + F+LP ++ ++ SN
Sbjct: 41 LLLEKAELPRYKTCGGGIIGPSRDTLPPGFELPFQ------DRVHAVTFSNNGRFTRTRR 94
Query: 132 KPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGG 191
G++ R D L E A+K GA + G + E G+
Sbjct: 95 SRQMLFGLINRPDFDLQLVEHAQKAGAELRTG--------------ATVTRVEQHGSA-- 138
Query: 192 VGEKRTLEV----------DAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVY 241
V ++RT+ V AV+GADG+ SR+ + + + + +P
Sbjct: 139 VPDRRTVAVVLQGGETVLARAVVGADGSASRIGAHVGVKLDQVDLGLEAEIPVP------ 192
Query: 242 YENLAEMYVGDDVS-----PDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQL----ATRNR 292
E +AE + G + P YGWVFPK D + VG + +G K L A
Sbjct: 193 -ETVAEDWKGRVLIDWGPIPGSYGWVFPKGDTLTVGVISARGEGAATKRYLEDFVARLGL 251
Query: 293 A--KDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRM 350
A + + G + R A + P R GRV + GDAAG + + EGI FA +SGR+
Sbjct: 252 AGFEPSVSSGHLTRCRAD---DSPLSR---GRVLVCGDAAGLLEPWTREGISFALRSGRL 305
Query: 351 CAEAIIEGSE 360
E + SE
Sbjct: 306 AGEWAVRISE 315
>gi|317154254|ref|YP_004122302.1| geranylgeranyl reductase [Desulfovibrio aespoeensis Aspo-2]
gi|316944505|gb|ADU63556.1| geranylgeranyl reductase [Desulfovibrio aespoeensis Aspo-2]
Length = 405
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 146/342 (42%), Gaps = 32/342 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLI-ERKLDNCKPCGGAIPLCMVGEFD----LP--L 105
V V+G GPAG A A+ G+ L+ ++K K CG A+ + E + LP L
Sbjct: 6 VIVVGAGPAGTCTAIHAARQGLHVLLLDQKKFPREKTCGDALSSLAIAELNSLGLLPRLL 65
Query: 106 DIIDRKVTKMKM--ISPSNVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVIN 162
+I V K+ S+V V I + G++ RR +LDA L E A + V++
Sbjct: 66 EIPHTPVQKITYHGADTSSVTVPILKIDDTASEAGIICRRILLDALLMEIAAEEEVEVVD 125
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDY 222
+ L + + V G +GG G + V+GADG++S VA+ +N Y
Sbjct: 126 WCRITEVLVKGGQAYGV------KGERGG-GRGVSWTAKVVVGADGSDSLVARQMNMPRY 178
Query: 223 DYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFP-KCDHVAVGTGT---VTH 278
A R +++ E++ ++V P Y W P + VG V
Sbjct: 179 PEYRALAVRGYF--RQVLGIRGNIEVHFPEEVLPG-YVWFHPTETSQTNVGLTIPMDVVK 235
Query: 279 KGDIKKFQLATRNRAKDKI-----LGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGY 332
+IK Q R A ++ ++ +EA +P R + G LVGDAAG
Sbjct: 236 DTNIKPKQALKRALASPELKERFAFAEQMGEIEAGVLPVGNPIREIHGNGFILVGDAAGL 295
Query: 333 VTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKY 374
V CS +G A S R+ E + + + + DE LR+Y
Sbjct: 296 VNPCSSDGTTNAIISARIAGEVLAKTCKGESW--DEAALREY 335
>gi|420352632|ref|ZP_14853769.1| FAD binding domain protein [Shigella boydii 4444-74]
gi|391281567|gb|EIQ40208.1| FAD binding domain protein [Shigella boydii 4444-74]
Length = 429
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 135/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G A AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGADVASSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNDGVMIVGDAAGF 306
>gi|123965819|ref|YP_001010900.1| NAD binding site [Prochlorococcus marinus str. MIT 9515]
gi|123200185|gb|ABM71793.1| NAD binding site [Prochlorococcus marinus str. MIT 9515]
Length = 377
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 143/370 (38%), Gaps = 72/370 (19%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERKLDN-CKPCGGAIPLCMVGEFDLPLDI---IDR 110
+IGGG +G + A L+K G +IE++ KPC G + M + LPLDI I+
Sbjct: 8 IIGGGLSGSSTALNLSKKGYSVLIIEKEATGIIKPCAGGMASSM--KQYLPLDIDQAIES 65
Query: 111 KV--TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
K+ + + S NV D L ++RRE LD L + A KNG ++
Sbjct: 66 KIRNVEFRWESSDNVNAD----LSGESPFWIIRREKLDQLLLDEALKNGIEILR------ 115
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
P E+ ++ + K + ++ ADG+ S+ A N G
Sbjct: 116 --PAQVEE----IISQNKTWRIKCSHKDIYKSKYLVIADGSQSQWAGYFNLG-------- 161
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDF------YGWVFPKCDHVAVGTGTVTHKGDI 282
+ K + + + L + D V +F + W FP D V +G GT +
Sbjct: 162 PRKPKFANTIALRLKGLGNI-PKDSVRFEFGFIKYGFAWAFPLKDSVNIGLGTFINN--- 217
Query: 283 KKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSG-------RVALVGDAAGYVTK 335
K + N K G + + E H + R +G RV VGDAA
Sbjct: 218 KLLEDEALNNKVLKSFGFEDLSFE----KVHKKLRIWNGTHKLNGDRVVAVGDAASLCDP 273
Query: 336 CSGEGI-------YFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKV 388
EGI YFAA+S C + ++ DL Y K + + +
Sbjct: 274 FLAEGIRPSLISSYFAAESIHQCLSS------------NKSDLNTYSIKINNEWGKSMAW 321
Query: 389 LDVLQKVFYR 398
+ ++FYR
Sbjct: 322 GKRIAQIFYR 331
>gi|403510060|ref|YP_006641698.1| geranylgeranyl reductase family protein [Nocardiopsis alba ATCC
BAA-2165]
gi|402803726|gb|AFR11136.1| geranylgeranyl reductase family protein [Nocardiopsis alba ATCC
BAA-2165]
Length = 434
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 159/385 (41%), Gaps = 36/385 (9%)
Query: 40 AKTSPKLTNR---NLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCG-GAIP 94
A +SP+ R + V V+G GP+G A LA+ G++ L+E+ K CG G P
Sbjct: 5 ATSSPRGRERVEYDADVIVVGAGPSGSTTAYYLAQAGLDVLLLEKTSFPREKVCGDGLTP 64
Query: 95 LCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDI---GQTLKPHEYIGMVR-REVLDAYLR 150
+ + + D K + V + L + G+VR R D L
Sbjct: 65 RAVKQLTAMGVTFEDEGWIKNHGLRIVGAGVRLELPWPELAAYPGYGLVRTRYDFDQILV 124
Query: 151 ERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGAN 210
ERA+ GA ++ + P E+ + + K E T V+ ADG +
Sbjct: 125 ERAKGAGAKLLE--RTNVTGPLMDERSNRIVGVQ---AKNADREPVTFRAPLVVAADGNS 179
Query: 211 SRVAKSINA---GDYDYAIAFQERVKIPDEKMVYYENLAEMY--VGD-DVSPDFYGWVFP 264
SR++ ++ D +A + + P Y E+ E++ GD DV YGWVF
Sbjct: 180 SRLSVAMGIRKRDDRPLGVAVRTYFESPRHDDDYLESWLELWDRSGDKDVLLPGYGWVFG 239
Query: 265 KCDHVA-VGTGTVTHKG---DIKKFQLATR---------NRAKDKILGGKIIRVEAHPIP 311
D + VG G + D+ +L R ++ GG IR A P+
Sbjct: 240 VGDGTSNVGLGILNSTSSFQDVDYRKLLRRWTDSMPEEWGFTEENQKGG--IRGAALPMG 297
Query: 312 EHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDL 371
+ P G + LVGDA G V +GEGI +A ++G++ A+ I++ T+ E L
Sbjct: 298 FNRVPHYSRG-LMLVGDAGGMVNPFNGEGIAYAMEAGQIAADVIVQAHGRTTQQTRERAL 356
Query: 372 RKYLEKWDKTYWPTYKVLDVLQKVF 396
+Y + TY Y + KV
Sbjct: 357 LRYPDVLADTYGGYYTLGRYFVKVI 381
>gi|294495257|ref|YP_003541750.1| geranylgeranyl reductase [Methanohalophilus mahii DSM 5219]
gi|292666256|gb|ADE36105.1| geranylgeranyl reductase [Methanohalophilus mahii DSM 5219]
Length = 398
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 139/351 (39%), Gaps = 57/351 (16%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDL-PLD-II 108
VAV+G GP G AA A +G + L+E P C G + + + E D+ P D +
Sbjct: 5 VAVVGAGPVGSVAARHAALHGAKVALLEEHATVGSPVQCAGLLSVRAMDECDISPTDPSV 64
Query: 109 DRKVTKMKMISPSNVA--VDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-INGLF 165
V + SP VD G+T ++ V R++ D L A G + +N
Sbjct: 65 INSVRGAFVHSPGGTCLPVDGGRT---RAFV--VSRKMFDRKLAALATSEGVHIFLNSKV 119
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA 225
+ +D F++ +V G+ +E VIGADG VA +
Sbjct: 120 VAIDNNSGFKRLHVQR----------AGKSEMIEASVVIGADGVRHGVASMVG---LPAP 166
Query: 226 IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCD---HVAVGTGTVTHKGDI 282
++ + ++ E++VG +P F+ W P D + + T + + +
Sbjct: 167 SRIMSGIQFEVQMETIRQDFVELFVGA-CAPGFFAWAIPLSDGTVRLGLATDNLESRDSL 225
Query: 283 KKFQLATRNRAK---------DKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYV 333
RN +K D ++GG IP R S V + GDAAG V
Sbjct: 226 SYLCELKRNLSKVGRAVDGMLDFVVGG---------IPIGVADRTFSDGVLICGDAAGQV 276
Query: 334 TKCSGEGIYFAAK----SGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDK 380
SG G+Y A +G + A+A E + + +R L +Y +W +
Sbjct: 277 KPTSGGGVYTGAVCAKIAGEVAAKAAFEKNTSKSR------LEEYEIRWKQ 321
>gi|269955276|ref|YP_003325065.1| geranylgeranyl reductase [Xylanimonas cellulosilytica DSM 15894]
gi|269303957|gb|ACZ29507.1| geranylgeranyl reductase [Xylanimonas cellulosilytica DSM 15894]
Length = 431
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 146/362 (40%), Gaps = 50/362 (13%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEF---DLPLDII 108
V V+G GPAG + A A G++ L+E+ K CG + V E + LD
Sbjct: 11 VIVVGAGPAGSSTAHWCASAGLDVLLLEKSAFPRDKICGDGLTPRAVAELARMGVALDPD 70
Query: 109 D---RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
D R + + + + Y + R LD L + A+++GA ++
Sbjct: 71 DGWIRNEGLRVLAGRRSWELPWPEVTAFPGYGSAMARATLDHRLAQHAQRSGAKLVE--R 128
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGV----GEKRTLEVDA--VIGADGANSRVAKSINA 219
K+ P E G GV ++R + A V+ ADG +SR A ++
Sbjct: 129 TKVTGP---------LLDERSGRTVGVVAQSADRREVVYRAPVVVAADGVSSRFATALGI 179
Query: 220 GDYD-------YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDF---YGWVFPKCD-H 268
D Y F+ + E+ E++ G+ D YGW+F D
Sbjct: 180 TRRDDRPMGTAYRTYFRSE-GTSRHADAWMESHLELWSGEPGRSDLLPGYGWIFALGDGT 238
Query: 269 VAVGTGTVTHKGDIKK---------FQLATRNRAKDKILGGK----IIRVEAHPIPEHPR 315
V VG G+V+ + Q TRN +D + IR A P+ +
Sbjct: 239 VNVGLGSVSSTPARQSAVGHDYRALLQQWTRNTPEDWGFTPENQVGPIRGAALPMGFNRT 298
Query: 316 PRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYL 375
P G + LVGDAAG V+ +GEGI +A ++GR+ A+AI + T E L Y
Sbjct: 299 PMYRDGTI-LVGDAAGMVSPFNGEGIAYALQAGRVAADAIAQARTRTTDAAREAVLGGYA 357
Query: 376 EK 377
E+
Sbjct: 358 ER 359
>gi|422499604|ref|ZP_16575865.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL063PA2]
gi|313829371|gb|EFS67085.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL063PA2]
Length = 425
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 154/392 (39%), Gaps = 55/392 (14%)
Query: 64 AAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVGEFDLPLDIIDR---KVTKMKMI 118
A A LA+ G+ L+E+ K CG G P + L +D+ + K T+ I
Sbjct: 25 ATAAHLARRGLHVTLLEKVTFPRDKVCGDGLTPRAVKQLIRLGIDVSEEAGWKHTEGLRI 84
Query: 119 SPSNVA--VDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMKMDLPRNFE 175
+A V L + GMV RR VLD L AE G +++ G N
Sbjct: 85 HGGRIAPFVLPWPELADYPNFGMVCRRTVLDERLARHAESQGVTLVEGA--------NVT 136
Query: 176 QPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYD-----YAIAFQE 230
P + G + G + + V V+ ADG +SR+ ++ D A+
Sbjct: 137 DPILDPSDRICGVRTSDGTEYSAPV--VVAADGNSSRLGLAMGLHKRDDRPMGVAVRAYY 194
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDF---YGWVFPKCD-HVAVGTGTVTHKGDIKKFQ 286
R + D + + E+ E++ G D YGW FP+ D V +G G + +
Sbjct: 195 RSALSDSRNL--ESWLELWDGPSQKSDLLPGYGWAFPEGDGTVNIGLGMLDSSAAFGRTD 252
Query: 287 LATRNRAKDKILGGKI----------IRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKC 336
+ + L + IR A P+ + +P G + LVGDA G V
Sbjct: 253 YRSLMKRWLSHLPAEWTLDEEHREGPIRGAALPMAFNRQPHYRDG-LLLVGDAGGMVNPF 311
Query: 337 SGEGIYFAAKSGRMCAEAIIEGSENGTRM-IDEGDLRKYLEKWDKTYWPTYKVLDVLQKV 395
+GEGI +A ++G M A+AI E G R E L+ Y + + Y++ +
Sbjct: 312 NGEGIDYAMEAGEMAADAIAEAHYRGHRTPAAEKALQGYPRALQRHFGGYYRLGTI---- 367
Query: 396 FYRSNPAREAFVEMCADEYVQKMTFDSYLYKR 427
FV + D V KM L +R
Sbjct: 368 ----------FVRLIGDPRVMKMCTTYGLPRR 389
>gi|315917521|ref|ZP_07913761.1| electron transfer flavoprotein-quinone oxidoreductase
[Fusobacterium gonidiaformans ATCC 25563]
gi|313691396|gb|EFS28231.1| electron transfer flavoprotein-quinone oxidoreductase
[Fusobacterium gonidiaformans ATCC 25563]
Length = 431
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 152/357 (42%), Gaps = 58/357 (16%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC--KPCGGAIPLCMVGEFDL 103
++ ++GGG AG +AA LA G+ ++ER D C K G E +
Sbjct: 1 MSEEKFDAIIVGGGLAGCSAAIVLANAGLAVLVVERG-DFCGAKNMTGGRLYGHSLEKII 59
Query: 104 PLDI----IDRKVTKMKM-ISPSNVAVDIG-------QTLKPHEYIGMVRREVLDAYLRE 151
P I+RK+T+ K+ + + + DIG T + Y V R V D +L
Sbjct: 60 PNFAEEAPIERKITREKISLMSEDGSFDIGFGSKKLSSTNENASY--TVLRSVFDQWLAS 117
Query: 152 RAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEK-RTLEVDAVIGADGAN 210
+AE+ GA +I G+ + + DG GV L D VI ADG N
Sbjct: 118 KAEEAGAEIIPGILVDELIME-------------DGKVVGVSATGEELYADVVILADGVN 164
Query: 211 SRVAKSINAGD----YDYAIAFQERVKIPDEKMVY------YENLAEMYVGD-DVSPDFY 259
S +A+SI + A+ +E +++ ++ + E +A + GD +
Sbjct: 165 SLLAQSIGMKKELEPHQVAVGAKEVIRLGEDVINQRFAVNGEEGVAWLSCGDPTLGGFGG 224
Query: 260 GWVFPKCDHVAVGTGTVTHKGDIKKFQLATR---NRAKDK------ILGGKIIRVEAHPI 310
G ++ D V+V G V DI +L+ +R K+ + GG I H +
Sbjct: 225 GLLYTNKDTVSV--GVVATLSDIGHHELSINQLLDRFKEHPSIAPYLEGGTSIEYSGHLV 282
Query: 311 PE---HPRPRRLSGRVALVGDAAGYVTKC--SGEGIYFAAKSGRMCAEAIIEGSENG 362
PE H P V + GDAAG+ + G+ FA +SGR+ AE +I+ + G
Sbjct: 283 PEEGLHMVPELYRDGVLVTGDAAGFCINLGFTVRGMDFAIESGRLAAETVIKAHQLG 339
>gi|284999005|ref|YP_003420773.1| FAD dependent oxidoreductase [Sulfolobus islandicus L.D.8.5]
gi|284446901|gb|ADB88403.1| FAD dependent oxidoreductase [Sulfolobus islandicus L.D.8.5]
Length = 395
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 150/338 (44%), Gaps = 52/338 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPLCMVGEFDLPLDI---- 107
+ V+G GPAG +AA T A+ G + L+ER + K GA + + +F DI
Sbjct: 5 IVVVGAGPAGSSAAITAARGGAKVLLLERGPEPGSKNVSGA--MIRLEDFSSVYDIASIP 62
Query: 108 IDRKVTKMKMISPSN-----VAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVIN 162
I+RKV + +I SN ++V++ L V R LD ++ ++AEK GA +I
Sbjct: 63 IERKVKNVDLILLSNSNRTRISVNVESNL------ASVARLKLDKWMAQQAEKAGALLIT 116
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAG-- 220
+ + + R + Y E D GE R D V+ A+G N+ V+ N
Sbjct: 117 KTTV-LGVEREGNE----YKVETDR-----GEVRA---DRVVLAEGVNALVSMKANIRPD 163
Query: 221 -DYDYAIAFQERVKIPDEKMVYY--------ENLAEMYVGDDVSPDFYGWVFPKCDHVAV 271
D+A+ + V ++ V E ++ +G D P + G+++ D VA+
Sbjct: 164 LTPDHAVQTVKEVYSLNKDEVNKRFGFKADDEGVSWRILGIDPVP-YAGFLYVYKDAVAI 222
Query: 272 GTGT---VTHKGDIKKF----QLATRNRAKDKILGGKIIRVEAHPIPEH--PRPRRLSGR 322
G G + K I + ++ R + + G + A IPE+ P + SG+
Sbjct: 223 GAGIPMKILIKRKITPYTVLDEVKERLGFNELVKGASLREYSAKVIPEYGFPSWKACSGK 282
Query: 323 VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
+ L GDA G V + GI A SG + +A +E E
Sbjct: 283 IYLAGDAIGLVDPLTFNGIGPAVASGVVAGKAALESYE 320
>gi|294784832|ref|ZP_06750120.1| ABC transporter, ATP-binding protein [Fusobacterium sp. 3_1_27]
gi|294486546|gb|EFG33908.1| ABC transporter, ATP-binding protein [Fusobacterium sp. 3_1_27]
Length = 431
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 149/353 (42%), Gaps = 50/353 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC--KPCGGAIPLCMVGEFDL 103
++ ++GGG AG +AA LA G+ ++ER D C K G E +
Sbjct: 1 MSEEKFDAIIVGGGLAGCSAAIVLANAGLAVLVVERG-DFCGAKNMTGGRLYGHSLEKII 59
Query: 104 PLDI----IDRKVTKMKM-ISPSNVAVDIGQTLKPHEYIG-----MVRREVLDAYLRERA 153
P I+RK+T+ K+ + + + DIG K V R D +L +A
Sbjct: 60 PNFAEEAPIERKITREKISLMSEDSSFDIGFGSKKLSSNNENASYTVLRSTFDRWLASKA 119
Query: 154 EKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEK-RTLEVDAVIGADGANSR 212
E+ GA +I G+ + + DG GV L D VI ADG NS
Sbjct: 120 EEAGAEIIPGILVDELILE-------------DGKVVGVSATGEELYADVVILADGVNSL 166
Query: 213 VAKSINAGD----YDYAIAFQERVKIPDEKMVYY------ENLAEMYVGD-DVSPDFYGW 261
+A+S+ + A+ +E +K+ ++ + E +A + GD + G
Sbjct: 167 LAQSLGMKKELEPHQVAVGAKEVIKLGEDVINQRFAVNNGEGVAWLSCGDPTLGGFGGGL 226
Query: 262 VFPKCDHVAVG-TGTVTHKG--DIKKFQLATRNRAKDKIL----GGKIIRVEAHPIPE-- 312
++ D V+VG T++ G D+ QL R + I GG I H +PE
Sbjct: 227 LYTNKDSVSVGVVATLSDIGHSDLSINQLLDRFKEHPAIAPYLEGGTSIEYSGHLVPEEG 286
Query: 313 -HPRPRRLSGRVALVGDAAGYVTKC--SGEGIYFAAKSGRMCAEAIIEGSENG 362
H P V + GDAAG+ + G+ FA +SGR+ AE +I+ E G
Sbjct: 287 LHMVPELYRDGVLVTGDAAGFCINLGFTVRGMDFAIESGRLAAETVIKAHEIG 339
>gi|429197202|ref|ZP_19189115.1| geranylgeranyl reductase family protein [Streptomyces ipomoeae
91-03]
gi|428667096|gb|EKX66206.1| geranylgeranyl reductase family protein [Streptomyces ipomoeae
91-03]
Length = 401
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 99/245 (40%), Gaps = 50/245 (20%)
Query: 137 IGMVRREVLDAYLRERAEKNGASVINGLFMK------MDLPRNFEQPYVLYYTEYDGTKG 190
G++ R D L E A+K GA + G + +P VL E
Sbjct: 100 FGLINRPEFDQQLVEHAQKAGAELRTGATVTRVEQHGSAVPDRRTVAVVLQNGE------ 153
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYV 250
TL AV+GADG+ SR+ + + + + +P E +AE +
Sbjct: 154 ------TLLARAVVGADGSASRIGAHVGVKLEQVDLGLEAEIPVP-------ETVAEDWK 200
Query: 251 GDDV-----SPDFYGWVFPKCDHVAVGTGTVTHKGD---------IKKFQLATRNRAKDK 296
G + P YGWVFPK D + VG + +G I + LA +
Sbjct: 201 GRVLIDWGPMPGSYGWVFPKGDTLTVGVISARGEGAATKRYLEDFIGRLGLAG---FEPS 257
Query: 297 ILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
+ G + R A P LS GRV + GDAAG + + EGI FA +SGR+ E
Sbjct: 258 VSSGHLTRCRADDSP-------LSRGRVLVCGDAAGLLEPWTREGISFALRSGRLAGEWA 310
Query: 356 IEGSE 360
+ +E
Sbjct: 311 VRIAE 315
>gi|260495257|ref|ZP_05815385.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Fusobacterium sp. 3_1_33]
gi|336419143|ref|ZP_08599409.1| ABC transporter, ATP-binding protein [Fusobacterium sp. 11_3_2]
gi|260197314|gb|EEW94833.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Fusobacterium sp. 3_1_33]
gi|336163834|gb|EGN66748.1| ABC transporter, ATP-binding protein [Fusobacterium sp. 11_3_2]
Length = 431
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 149/353 (42%), Gaps = 50/353 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC--KPCGGAIPLCMVGEFDL 103
++ ++GGG AG +AA LA G+ ++ER D C K G E +
Sbjct: 1 MSEEKFDAIIVGGGLAGCSAAIVLANAGLAVLVVERG-DFCGAKNMTGGRLYGHSLEKII 59
Query: 104 PLDI----IDRKVTKMKM-ISPSNVAVDIGQTLKPHEYIG-----MVRREVLDAYLRERA 153
P I+RK+T+ K+ + + + DIG K V R D +L +A
Sbjct: 60 PNFAEEAPIERKITREKISLMSEDSSFDIGFGSKKLSSNNENASYTVLRSTFDRWLASKA 119
Query: 154 EKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEK-RTLEVDAVIGADGANSR 212
E+ GA +I G+ + + DG GV L D VI ADG NS
Sbjct: 120 EEAGAEIIPGILVDELIVE-------------DGKVVGVSATGEELYADVVILADGVNSL 166
Query: 213 VAKSINAGD----YDYAIAFQERVKIPDEKMVYY------ENLAEMYVGD-DVSPDFYGW 261
+A+S+ + A+ +E +K+ ++ + E +A + GD + G
Sbjct: 167 LAQSLGMKKELEPHQVAVGAKEVIKLGEDVINQRFAVNNGEGVAWLSCGDPTLGGFGGGL 226
Query: 262 VFPKCDHVAVG-TGTVTHKG--DIKKFQLATRNRAKDKIL----GGKIIRVEAHPIPE-- 312
++ D V+VG T++ G D+ QL R + I GG I H +PE
Sbjct: 227 LYTNKDSVSVGVVATLSDIGHSDLSINQLLDRFKEHPAIAPYLEGGTSIEYSGHLVPEEG 286
Query: 313 -HPRPRRLSGRVALVGDAAGYVTKC--SGEGIYFAAKSGRMCAEAIIEGSENG 362
H P V + GDAAG+ + G+ FA +SGR+ AE +I+ E G
Sbjct: 287 IHMVPELYRDGVLVTGDAAGFCINLGFTVRGMDFAIESGRLAAETVIKAHEIG 339
>gi|227831465|ref|YP_002833245.1| FAD dependent oxidoreductase [Sulfolobus islandicus L.S.2.15]
gi|227457913|gb|ACP36600.1| FAD dependent oxidoreductase [Sulfolobus islandicus L.S.2.15]
Length = 395
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 150/338 (44%), Gaps = 52/338 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPLCMVGEFDLPLDI---- 107
+ V+G GPAG +AA T A+ G + L+ER + K GA + + +F DI
Sbjct: 5 IVVVGAGPAGSSAAITAARGGAKVLLLERGPEPGSKNVSGA--MIRLEDFSSVYDIASIP 62
Query: 108 IDRKVTKMKMISPSN-----VAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVIN 162
I+RKV + +I SN ++V++ L V R LD ++ ++AEK GA +I
Sbjct: 63 IERKVKNVDLILLSNSNRTRISVNVESNL------ASVARLKLDKWMAQQAEKAGALLIT 116
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAG-- 220
+ + + R + Y E D GE R D V+ A+G N+ V+ N
Sbjct: 117 KTTV-LGVKREGNE----YKVETDR-----GEVRA---DRVVLAEGVNALVSMKANIRPD 163
Query: 221 -DYDYAIAFQERVKIPDEKMVYY--------ENLAEMYVGDDVSPDFYGWVFPKCDHVAV 271
D+A+ + V ++ V E ++ +G D P + G+++ D VA+
Sbjct: 164 LTPDHAVQTVKEVYSLNKDEVNKRFGFKADDEGVSWRILGIDPVP-YAGFLYVYKDAVAI 222
Query: 272 GTGT---VTHKGDIKKF----QLATRNRAKDKILGGKIIRVEAHPIPEH--PRPRRLSGR 322
G G + K I + ++ R + + G + A IPE+ P + SG+
Sbjct: 223 GAGIPMKILIKRKITPYTVLDEVKERLGFNELVKGASLREYSAKVIPEYGFPSWKACSGK 282
Query: 323 VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
+ L GDA G V + GI A SG + +A +E E
Sbjct: 283 IYLAGDAIGLVDPLTFNGIGPAVASGVVAGKAALESYE 320
>gi|57641771|ref|YP_184249.1| geranylgeranyl hydrogenase [Thermococcus kodakarensis KOD1]
gi|57160095|dbj|BAD86025.1| geranylgeranyl hydrogenase [Thermococcus kodakarensis KOD1]
Length = 371
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 129/317 (40%), Gaps = 47/317 (14%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPLCMVGEFDLPLDIIDRK 111
V +IGGGP G A LA++ ++ERK K C G I LP + +
Sbjct: 5 VLIIGGGPVGNYLASLLARD-FNVAVVERKTSFGGKACTGIIGAENYERLGLPEKAVLNQ 63
Query: 112 VTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLP 171
+ S + +I Q P Y+ V R+ L+ L + A K GA G
Sbjct: 64 LRGAVFYSRIQ-SFEI-QRKSPQAYV--VDRKTLEKELAKSAVKKGADYFMG-------- 111
Query: 172 RNFEQPYVLYYTEYDGTKGG------VGEKRTLEVDAVIGADGANSRVAKSINAG-DYDY 224
T + G K G + E+ +E +GADG S VAK+I A ++
Sbjct: 112 -----------TTFQGFKNGKAVLSHMNERLEVEASFYVGADGVASTVAKNIGASTKAEF 160
Query: 225 AIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGT-GTVTHKGDI 282
++ V E+ + E++V +++P F+ WV P D +A VGT GT+
Sbjct: 161 LTGYEIEVVGEFERT----DFTEVWVNKEITPKFFAWVTPVEDDLARVGTFGTLDELNRF 216
Query: 283 KKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIY 342
+ ++ + I +A + R + VAL+GDAA + + GI
Sbjct: 217 LRVRMLKPTSS---------IEFKAGSVGLGWRKPWIRENVALIGDAALQIKPTTAGGIA 267
Query: 343 FAAKSGRMCAEAIIEGS 359
+ +A+IEG+
Sbjct: 268 YGMLCAHALRKALIEGA 284
>gi|423138045|ref|ZP_17125688.1| hypothetical protein HMPREF9942_01826 [Fusobacterium nucleatum
subsp. animalis F0419]
gi|371958607|gb|EHO76316.1| hypothetical protein HMPREF9942_01826 [Fusobacterium nucleatum
subsp. animalis F0419]
Length = 431
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 149/353 (42%), Gaps = 50/353 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC--KPCGGAIPLCMVGEFDL 103
++ ++GGG AG +AA LA G+ ++ER D C K G E +
Sbjct: 1 MSEEKFDAIIVGGGLAGCSAAIVLANAGLAVLVVERG-DFCGAKNMTGGRLYGHSLEKII 59
Query: 104 PLDI----IDRKVTKMKM-ISPSNVAVDIGQTLKPHEYIG-----MVRREVLDAYLRERA 153
P I+RK+T+ K+ + + + DIG K V R D +L +A
Sbjct: 60 PNFAEEAPIERKITREKISLMSKDSSFDIGFGSKKLSSNNENASYTVLRSTFDRWLASKA 119
Query: 154 EKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEK-RTLEVDAVIGADGANSR 212
E+ GA +I G+ + + DG GV L D VI ADG NS
Sbjct: 120 EEAGAEIIPGILVDELIVE-------------DGKVVGVSATGEELYADVVILADGVNSL 166
Query: 213 VAKSINAGD----YDYAIAFQERVKIPDEKMVYY------ENLAEMYVGD-DVSPDFYGW 261
+A+S+ + A+ +E +K+ ++ + E +A + GD + G
Sbjct: 167 LAQSLGMKKELEPHQVAVGAKEVIKLGEDVINQRFAVNNGEGVAWLSCGDPTLGGFGGGL 226
Query: 262 VFPKCDHVAVG-TGTVTHKG--DIKKFQLATRNRAKDKIL----GGKIIRVEAHPIPE-- 312
++ D V+VG T++ G D+ QL R + I GG I H +PE
Sbjct: 227 LYTNKDSVSVGVVATLSDIGHSDLSINQLLDRFKEHPAIAPYLEGGTSIEYSGHLVPEEG 286
Query: 313 -HPRPRRLSGRVALVGDAAGYVTKC--SGEGIYFAAKSGRMCAEAIIEGSENG 362
H P V + GDAAG+ + G+ FA +SGR+ AE +I+ E G
Sbjct: 287 IHMVPELYRDGVLVTGDAAGFCINLGFTVRGMDFAIESGRLAAETVIKAHEIG 339
>gi|289765504|ref|ZP_06524882.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Fusobacterium sp. D11]
gi|289717059|gb|EFD81071.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Fusobacterium sp. D11]
Length = 431
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 155/373 (41%), Gaps = 52/373 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC--KPCGGAIPLCMVGEFDL 103
++ ++GGG AG +AA LA G+ ++ER D C K G E +
Sbjct: 1 MSEEKFDAIIVGGGLAGCSAAIVLANAGLAVLVVERG-DFCGAKNMTGGRLYGHSLEKII 59
Query: 104 PLDI----IDRKVTKMKM-ISPSNVAVDIGQTLKPHEYIG-----MVRREVLDAYLRERA 153
P I+RK+T+ K+ + + + DIG K V R D +L +A
Sbjct: 60 PNFAEEAPIERKITREKISLMSEDSSFDIGFGSKKLSSNNENASYTVLRSTFDRWLASKA 119
Query: 154 EKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEK-RTLEVDAVIGADGANSR 212
E+ GA +I G+ + + DG GV L D VI ADG NS
Sbjct: 120 EEAGAEIIPGILVDELIVE-------------DGKVVGVSATGEELYADVVILADGVNSL 166
Query: 213 VAKSINAGD----YDYAIAFQERVKIPDEKMVYY------ENLAEMYVGD-DVSPDFYGW 261
+A+S+ + A+ +E +K+ ++ + E +A + GD + G
Sbjct: 167 LAQSLGMKKELEPHQVAVGAKEVIKLGEDVINQRFAVNNGEGVAWLSCGDPTLGGFGGGL 226
Query: 262 VFPKCDHVAVG-TGTVTHKG--DIKKFQLATRNRAKDKIL----GGKIIRVEAHPIPE-- 312
++ D V+VG T++ G D+ QL R + I GG I H +PE
Sbjct: 227 LYTNKDSVSVGVVATLSDIGHSDLSINQLLDRFKEHPAIAPYLEGGTSIEYSGHLVPEEG 286
Query: 313 -HPRPRRLSGRVALVGDAAGYVTKC--SGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEG 369
H P V + GDAAG+ + G+ FA +SGR+ AE +I+ E G
Sbjct: 287 IHMVPELYRDGVLVTGDAAGFCINLGFTVRGMDFAIESGRLAAETVIKAHEIGD--FSAA 344
Query: 370 DLRKYLEKWDKTY 382
L Y + D ++
Sbjct: 345 TLSDYKKALDDSF 357
>gi|427734020|ref|YP_007053564.1| geranylgeranyl reductase [Rivularia sp. PCC 7116]
gi|427369061|gb|AFY53017.1| geranylgeranyl reductase family protein [Rivularia sp. PCC 7116]
Length = 370
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 136/337 (40%), Gaps = 37/337 (10%)
Query: 69 LAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLD-IIDRKVTKMKMISPSNVAVD 126
LAK G ++ER+ L KPCGG + + FD I KV +K V+
Sbjct: 20 LAKQGRSVLVLERESLPRYKPCGGGVSPAIAKWFDFDFSPAISEKVDTIKFTWKKGDPVE 79
Query: 127 IG-QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK-MDLPRNFEQPYVLYYTE 184
QT++P + MV+R+V D +L ++A+K GA + + +K +D + Y E
Sbjct: 80 TKIQTIEP---VWMVQRDVFDHFLVQQAQKQGAELKDSTEVKSIDFKGD--------YWE 128
Query: 185 YDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGD--YDYAIAFQERVKIPDEKMVYY 242
+ G T +I ADGA+ +AK + + +A A + +K
Sbjct: 129 VNTANG------TFSARYLIAADGASGPMAKWLGFKEPKRRFAAALEAPTASGQDKSKIQ 182
Query: 243 ENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKI 302
+ G Y W FPK D V++G T G+ F ++ + +
Sbjct: 183 FEFGTIKNG-------YIWSFPKGDGVSIGATTFLG-GEPGNFTKIFKDCSSMFGIDINA 234
Query: 303 IRVEAHPIPEHPRPRRLSGRVA-LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSEN 361
+ HPI + L + A L G+AA V + EGI + SG AEAI N
Sbjct: 235 CKEYTHPICVWNGNKTLHTQNAVLAGEAACVVDPMTAEGIRPSIFSGMKAAEAI-----N 289
Query: 362 GTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398
D L KY E ++ + L FYR
Sbjct: 290 KAIGGDPNALEKYTEVMNEEWGADMAWAQKLAGAFYR 326
>gi|11498628|ref|NP_069856.1| bacteriochlorophyll synthase, 43 kDa subunit [Archaeoglobus
fulgidus DSM 4304]
gi|2649572|gb|AAB90220.1| bacteriochlorophyll synthase, 43 kDa subunit (chlP-2)
[Archaeoglobus fulgidus DSM 4304]
Length = 364
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 149/376 (39%), Gaps = 53/376 (14%)
Query: 54 AVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIP-LCM--VGEFDLPLDII 108
AV+GGGPAG AA L K+ + L E P C G + C + E I
Sbjct: 4 AVVGGGPAGSLAAILLGKS-YDVALFEEHQSAGFPVQCAGLVSDKCYKKLKEHCKAEKAI 62
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
+ + SPS V G+ E + +V R++LD L ERA +
Sbjct: 63 ENHIKGAFFFSPSGKIVLEGRG----EAV-VVERKILDRLLFERAAERA----------- 106
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
+ +V +G + + R + + +IGADG NS V + + A
Sbjct: 107 -------KVFVKEKARLNGFRI-ITPSREVSAEKIIGADGVNSTVREHFGFPTMGFFTAV 158
Query: 229 QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQ-L 287
Q K EN E+Y G + S F+ + P D +G V+ ++ + L
Sbjct: 159 QVEAKFEPLD----ENCVELYFGGNWSDSFFAYAIPLGDTARIGV--VSRSSPLRYLENL 212
Query: 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAK 346
R+ + + G + + A IP+ R + S R VAL+GDAAG V +G G+Y+
Sbjct: 213 MKRHPSVSGRVEGSAVELNAGAIPD--RLVKFSKRDVALIGDAAGMVKPYTGGGLYYHLI 270
Query: 347 SGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAF 406
+ AE+ DL+ Y + + K Y+ ++K++ + E
Sbjct: 271 AAEKLAESF-------------PDLKGYEKSYLKEMGREYRFGYAVRKLYSLPDEKLEQL 317
Query: 407 VEMCADEYVQKMTFDS 422
AD + + DS
Sbjct: 318 FSAMADFDFRGVHMDS 333
>gi|34762287|ref|ZP_00143292.1| Probable electron transfer flavoprotein-quinone oxidoreductase ydiS
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
gi|237742645|ref|ZP_04573126.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Fusobacterium sp. 4_1_13]
gi|256846039|ref|ZP_05551497.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Fusobacterium sp. 3_1_36A2]
gi|421144581|ref|ZP_15604492.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Fusobacterium nucleatum subsp. fusiforme ATCC 51190]
gi|27888073|gb|EAA25135.1| Probable electron transfer flavoprotein-quinone oxidoreductase ydiS
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
gi|229430293|gb|EEO40505.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Fusobacterium sp. 4_1_13]
gi|256719598|gb|EEU33153.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Fusobacterium sp. 3_1_36A2]
gi|395489048|gb|EJG09892.1| electron transfer flavoprotein-quinone oxidoreductase ydiS
[Fusobacterium nucleatum subsp. fusiforme ATCC 51190]
Length = 431
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 155/373 (41%), Gaps = 52/373 (13%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC--KPCGGAIPLCMVGEFDL 103
++ ++GGG AG +AA LA G+ ++ER D C K G E +
Sbjct: 1 MSEEKFDAIIVGGGLAGCSAAIVLANAGLAVLVVERG-DFCGAKNMTGGRLYGHSLEKII 59
Query: 104 PLDI----IDRKVTKMKM-ISPSNVAVDIGQTLKPHEYIG-----MVRREVLDAYLRERA 153
P I+RK+T+ K+ + + + DIG K V R D +L +A
Sbjct: 60 PNFAEEAPIERKITREKISLMSEDSSFDIGFGSKKLSSNNENASYTVLRSTFDRWLASKA 119
Query: 154 EKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEK-RTLEVDAVIGADGANSR 212
E+ GA +I G+ + + DG GV L D VI ADG NS
Sbjct: 120 EEAGAEIIPGILVDELILE-------------DGKVVGVSATGEELYADVVILADGVNSL 166
Query: 213 VAKSINAGD----YDYAIAFQERVKIPDEKMVYY------ENLAEMYVGD-DVSPDFYGW 261
+A+S+ + A+ +E +K+ ++ + E +A + GD + G
Sbjct: 167 LAQSLGMKKELEPHQVAVGAKEVIKLGEDVINQRFAVNNGEGVAWLSCGDPTLGGFGGGL 226
Query: 262 VFPKCDHVAVG-TGTVTHKG--DIKKFQLATRNRAKDKIL----GGKIIRVEAHPIPE-- 312
++ D V+VG T++ G D+ QL R + I GG I H +PE
Sbjct: 227 LYTNKDSVSVGVVATLSDIGHSDLSINQLLDRFKEHPAIAPYLEGGTSIEYSGHLVPEEG 286
Query: 313 -HPRPRRLSGRVALVGDAAGYVTKC--SGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEG 369
H P V + GDAAG+ + G+ FA +SGR+ AE +I+ E G
Sbjct: 287 LHMVPELYRDGVLVTGDAAGFCINLGFTVRGMDFAIESGRLAAETVIKAHEIGD--FSAA 344
Query: 370 DLRKYLEKWDKTY 382
L Y + D ++
Sbjct: 345 TLSDYKKALDSSF 357
>gi|187250698|ref|YP_001875180.1| putative oxidoreductase [Elusimicrobium minutum Pei191]
gi|186970858|gb|ACC97843.1| Dehydrogenase family protein [Elusimicrobium minutum Pei191]
Length = 353
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 137/338 (40%), Gaps = 53/338 (15%)
Query: 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC---KPCGGAIPLCMVGEF---- 101
++ +A+IG GPAG A L I++K + KPCGG + E
Sbjct: 2 KHFDIAIIGLGPAGATLARLLDGKFFRVAAIDKKGADSSFQKPCGGLLAPDAQKELAKFN 61
Query: 102 -DLPLDI-IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGAS 159
LP DI +D ++ +K I N Q + Y+ + R D++L KN
Sbjct: 62 LTLPKDILVDPQIFSVKTIDLKNRITKHYQRM----YLN-IDRSKFDSWLISLIPKNVKI 116
Query: 160 VINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK---- 215
N + M ++ + + + E G K+ + D V+GADGA+S V +
Sbjct: 117 FKNSICQYM---LKTQRGFKIVFDEN-------GHKQEITADYVVGADGADSFVRRMFFP 166
Query: 216 SINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGT 275
N Y A Q+ K +K Y + D + D Y W K H G G
Sbjct: 167 KFNIRKY---TAVQQWFKDEHQKPFY------SCILDPENTDCYSWALSKDGHFIFG-GA 216
Query: 276 VTHKGDIKKFQLATRNRAKDKILGGKI---IRVEAHPIPEHPRPRRLS------GRVALV 326
+KF+ R + K LG K ++ EA I RP + G V L+
Sbjct: 217 YPVSNSREKFE---RQKEKLSELGFKFPEPVKTEACMIL---RPNSFTEFCLGGGNVFLI 270
Query: 327 GDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTR 364
G+AAG+++ S EGI A K+ ++ + + EN R
Sbjct: 271 GEAAGFISPSSLEGISSAFKTAKILGDIFNKHKENKHR 308
>gi|88602103|ref|YP_502281.1| geranylgeranyl reductase [Methanospirillum hungatei JF-1]
gi|88187565|gb|ABD40562.1| geranylgeranyl reductase [Methanospirillum hungatei JF-1]
Length = 384
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 127/321 (39%), Gaps = 42/321 (13%)
Query: 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPL 105
NR VA++GGGP G AA AK+G++T LIE + P C G + E ++
Sbjct: 2 NRTYDVAIVGGGPVGSTAARICAKSGLKTLLIEEQAHFGYPVQCAGLLSDSAFRECEVSC 61
Query: 106 DIIDRKVTKMKMIS-PSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
+ V+ + + + + D G+T+ Y+ V R LD + + A GA +
Sbjct: 62 SSVLNTVSGADVHAGEATCSFDAGRTMA---YV--VDRGALDHEMGKAAADAGADIQ--- 113
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN---AGD 221
+K +L+ GV + +I ADG S +++ + A
Sbjct: 114 -LKTIASGISRTSGILHLK-------GVNGPEDVSYSMLIAADGPRSSISRMVGIPRAPV 165
Query: 222 YDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFP-KCDHVAVGTGTVTH-K 279
Y + +P + + Y N SP+F+GW+ P D +G + H K
Sbjct: 166 YLSGLQCDVHHALPPDHVQIYPN---------ASPEFFGWMIPLHPDQTRIGLCGIHHVK 216
Query: 280 GDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGE 339
+F +N+A + G IP R R+ + GDAA SG
Sbjct: 217 ERFSEFIKPFQNKATHFVSG---------TIPLGTLTRSYDDRILIAGDAAAMAKPTSGG 267
Query: 340 GIYFAAKSGRMCAEAIIEGSE 360
G+Y ++ R AE I E
Sbjct: 268 GVYTGIRAARHAAEVAIRCIE 288
>gi|334117694|ref|ZP_08491785.1| geranylgeranyl reductase [Microcoleus vaginatus FGP-2]
gi|333460803|gb|EGK89411.1| geranylgeranyl reductase [Microcoleus vaginatus FGP-2]
Length = 365
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 123/318 (38%), Gaps = 58/318 (18%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPLD-IIDRKV 112
++G GPAG AA LAK G ++E+ L KPC G +P + D L I RK
Sbjct: 6 IVGAGPAGSTAAYHLAKQGRSVVVVEKASLPRKKPCTGGVPGAIAQWLDFDLTPAISRKA 65
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPR 172
K+ V + Q P + MV+ +V D +L ++A+K GA
Sbjct: 66 NKITYTWKMEYLVQVQQINSP---MWMVQADVFDDFLIKQAQKTGAE------------- 109
Query: 173 NFEQPYVLYYTEYDGT--KGGVGEKRT----LEVDAVIGADGANSRVAKSINAGDYDYAI 226
+ + TE G K V E +T + +I A A + K
Sbjct: 110 ------LRHSTEVKGIKFKNSVWEVKTNSEPVSGRYLIAAGSAGGSMTK----------- 152
Query: 227 AFQERVKIPDEKMVYYENLAEMYV-GDDVSPDF------YGWVFPKCDHVAVGTGTV--T 277
++ + + K+ +L + GD V+ DF + W FP+ D + +
Sbjct: 153 ----KLGLKEPKLCLSASLETRSIKGDSVNFDFGTIKKGFIWSFPQADGYSWSIAAMRGD 208
Query: 278 HKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVTKC 336
DIKK + + + V HP+ R+L S L GDAA
Sbjct: 209 KPKDIKKMLAEYAPKCGADV---SVSNVREHPMSLWEGDRKLHSPNSLLAGDAASLADPL 265
Query: 337 SGEGIYFAAKSGRMCAEA 354
SGEGI A SG A+A
Sbjct: 266 SGEGIRPAIFSGFKAAKA 283
>gi|56751021|ref|YP_171722.1| hypothetical protein syc1012_c [Synechococcus elongatus PCC 6301]
gi|81299319|ref|YP_399527.1| geranylgeranyl reductase [Synechococcus elongatus PCC 7942]
gi|56685980|dbj|BAD79202.1| hypothetical protein [Synechococcus elongatus PCC 6301]
gi|81168200|gb|ABB56540.1| geranylgeranyl reductase [Synechococcus elongatus PCC 7942]
Length = 376
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 135/336 (40%), Gaps = 34/336 (10%)
Query: 69 LAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPL-DIIDRKVTKMKMISPSNVAVD 126
LA+ + L+E+ +L K C G + + FD L ++D V +++ V+
Sbjct: 20 LARRDRQVLLLEQAQLPRQKACAGGVSPQVARWFDCDLRSVVDHGVDRLRFTWKLGDPVE 79
Query: 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYD 186
L E MVRR+ D +L E+A GA + +G + E D
Sbjct: 80 --AELPSEEPFWMVRRDRFDHFLVEQAANLGARIEDGAAVTA------------VSAEGD 125
Query: 187 GTKGGVGEKRTLEVDAVIGADGANSRVAKSIN--AGDYDYAIAFQERVKIPDEKMVYYEN 244
G VG+ R +I ADGA +A+ + + YA A + V +P ++
Sbjct: 126 GWLVTVGD-RAYRSRTLIAADGARGPLAQWLGFPSQKRRYAQACELDVPLPARP----DS 180
Query: 245 LAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIR 304
A G + + Y WVFPK D ++G GT D F+ + + R
Sbjct: 181 TAHFEFG--LVRNGYIWVFPKSDGYSIGIGTF-RGNDATDFRGLLETYLAGFGVSADLDR 237
Query: 305 VEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGT 363
+ HP+ + L G LVG+AA + EGI A SG AEA I+ + G
Sbjct: 238 IVPHPLCVWDGSQPLHRGSALLVGEAASLTDPFTAEGIRPALLSGMRAAEA-IDRAIAGD 296
Query: 364 RMIDEGDLRKYLEKW-DKTYWPTYKVLDVLQKVFYR 398
R G R ++W D W + VFYR
Sbjct: 297 RNALAGYSRTIQQEWGDSMAWAKR-----ISSVFYR 327
>gi|147678765|ref|YP_001212980.1| dehydrogenases [Pelotomaculum thermopropionicum SI]
gi|146274862|dbj|BAF60611.1| dehydrogenases [Pelotomaculum thermopropionicum SI]
Length = 428
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 152/372 (40%), Gaps = 61/372 (16%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEF------D 102
V ++G G AG AA LA G+E LIER + GG + + + +
Sbjct: 5 FEVVIVGAGVAGSTAAYILASAGLEVLLIERGNYAGSKNMTGGRLYSHSLNKIIPNFAKE 64
Query: 103 LPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEY-IG-------MVRREVLDAYLRERAE 154
P ++RK+TK K+ S + D TL H +G V R D +L ++AE
Sbjct: 65 AP---VERKITKEKV---SLLTEDSAITLDYHSSRLGGNLRDSYSVLRGEFDQWLAQKAE 118
Query: 155 KNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVA 214
+ GA + G+ + L N + G K G E +E D V+ ADG NS +A
Sbjct: 119 EAGAVLAAGVRVDELLTNN---------GKVVGVKAGEDE---IEADVVVLADGVNSLLA 166
Query: 215 KSINAGD----YDYAIAFQERVKIPDEKMVYYENLAE------MYVGDDVSPDFYGWVFP 264
+ I ++ A+ +E +++P + + NL E ++ G + G F
Sbjct: 167 QQIGLKKELQPHEVAVGAKEVIELPKQVIEDRFNLNEEEGAAWLFAG-SCTSGIVGGGFI 225
Query: 265 KCDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR 315
+ ++ G V DI + +D I GGK++ H +PE
Sbjct: 226 YTNKSSLSLGIVCTLSDIANSVKSVCQMVEDFKMHPAIKPLIKGGKLLEYSGHLVPEAGY 285
Query: 316 ---PRRLSGRVALVGDAAGYVTKC--SGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGD 370
P+ V +VGDAAG V + G+ A S A+ II+ E G +
Sbjct: 286 DMVPQLYGDGVVIVGDAAGLVINVGYTVRGMDLAITSAEAAAKVIIKAREKGD--FSKNS 343
Query: 371 LRKYLEKWDKTY 382
L Y + D+++
Sbjct: 344 LATYKQFLDQSF 355
>gi|344998120|ref|YP_004800974.1| geranylgeranyl reductase [Streptomyces sp. SirexAA-E]
gi|344313746|gb|AEN08434.1| geranylgeranyl reductase [Streptomyces sp. SirexAA-E]
Length = 406
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 99/247 (40%), Gaps = 52/247 (21%)
Query: 137 IGMVRREVLDAYLRERAEKNGASVINGLFMKM------DLPRNFEQPYVLYYTEYDGTKG 190
G++ R DA L E A+K GA + G + +P VL E
Sbjct: 104 FGLINRPEFDAGLVEEAQKAGAELRTGASVSRVEQHGPAVPDRRTVAVVLADGE------ 157
Query: 191 GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYV 250
T+ AV+GADG+ R+ + + + + +P E +AE +
Sbjct: 158 ------TVLARAVVGADGSAGRIGAHVGVKLDQVDLGLEAEIPVP-------ETVAEDWA 204
Query: 251 GDDVS-----PDFYGWVFPKCDHVAVGTGTVTHKGD-----------IKKFQLATRNRAK 294
G + P YGWVFPK D + VG + +GD I + LA +
Sbjct: 205 GRVLIDWGPIPGSYGWVFPKGDTLTVGV--IAARGDGAGTKRYLDDFIGRLGLAG---FE 259
Query: 295 DKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEA 354
I G + R + P GRV + GDAAG + + EGI FA +SGR+ E
Sbjct: 260 PTISSGHLTRCRSEDSPLS------RGRVVVCGDAAGLLEPWTREGISFALRSGRLAGEW 313
Query: 355 IIEGSEN 361
+ +E+
Sbjct: 314 AVRIAES 320
>gi|427727990|ref|YP_007074227.1| geranylgeranyl reductase [Nostoc sp. PCC 7524]
gi|427363909|gb|AFY46630.1| geranylgeranyl reductase family protein [Nostoc sp. PCC 7524]
Length = 381
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 138/339 (40%), Gaps = 57/339 (16%)
Query: 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPLD 106
N + + ++GGGPAG A + AK G++ L+++ K K CG A+ + V E
Sbjct: 2 NYDYDLIIVGGGPAGSTMALSAAKQGLKVLLVDKEKFPRDKICGDALTVSSV-EILQEFH 60
Query: 107 IIDRKVTK-----MKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAE-----KN 156
+ID+ + + MI S + ++ +YI RR + D L + A+ K
Sbjct: 61 LIDKLLLEPHGCANNMIFYSETERLMPPSMNDAQYISTSRRWIFDNVLFQAAKACTETKE 120
Query: 157 GASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS 216
G V N L M+ + GT GEK+ V GADG +S VA+
Sbjct: 121 GFKVEN-LLMQNGWVFGIQ-----------GTSAD-GEKQEYTAKVVAGADGCSSVVARK 167
Query: 217 I---NAGDYDYAIAFQERVKIPDEKMVYYENL------AEMYVGDDVSPDFYGWVFPKCD 267
+ + D A+A + YY NL E+Y + P ++ W+FP D
Sbjct: 168 LGLYQSLKQDGAVATR----------AYYRNLDVSGSELELYYLPECRPGYF-WIFP-VD 215
Query: 268 HVAVGTGTVTHKGDIKKFQL----ATRNRAKDKILGGKIIR------VEAHPIPEHPRPR 317
V G + ++K + R + +L + ++ ++ +P R
Sbjct: 216 KETVNVGVILFDQNLKSTGIFPPQIHRQLIQSPLLKARFLQAEPVGNIQCWYLPLAKTTR 275
Query: 318 RLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
+ G L GDAAG + GI A SG++ E +
Sbjct: 276 TIHGNGFILSGDAAGLIDPLIAHGIDRAMVSGKIAGELL 314
>gi|327401025|ref|YP_004341864.1| geranylgeranyl reductase [Archaeoglobus veneficus SNP6]
gi|327316533|gb|AEA47149.1| geranylgeranyl reductase [Archaeoglobus veneficus SNP6]
Length = 382
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 90/195 (46%), Gaps = 31/195 (15%)
Query: 202 AVIGADGANSRVAKSINAGDYDYAIAFQERVK--IPDEKMVYYENLAEMYVGDDVSPDFY 259
+I +DGANS++AK +N Y+ A A Q + DE +VY MYVG+ ++P Y
Sbjct: 141 VLIASDGANSKIAKKLNVWKYELASAKQYVMSGVECDEDVVY------MYVGNKIAPGGY 194
Query: 260 GWVFPKCDHVA-VGTG---TVTHKGD---------IKKFQLATRNRAKDKILGGKIIRVE 306
W+ PK D +A VG G + KGD +K++ ++ K +I+G ++
Sbjct: 195 AWIIPKGDGIANVGVGIRQSFLGKGDSIHRVLDRFVKEYPYSSCYLKKAEIVG----KIG 250
Query: 307 AHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMI 366
A + P + + G V L GD+A + GI + +G + I E E G
Sbjct: 251 AVAPVDRPLDKTVYGNVLLAGDSASMILSHVAAGIPTSMIAGDIAGRVINEYFEGGM--- 307
Query: 367 DEGDLRKYLEKWDKT 381
+L +Y W K
Sbjct: 308 ---ELEEYDRLWRKA 319
>gi|453054745|gb|EMF02194.1| putative FAD-dependent oxidoreductase [Streptomyces mobaraensis
NBRC 13819 = DSM 40847]
Length = 432
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 96/230 (41%), Gaps = 20/230 (8%)
Query: 137 IGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKR 196
G+V R DA L E A+ GA V G+ + EQ + + +G+
Sbjct: 125 FGLVNRAEFDAGLVEAAKAAGAEVRTGVTVA-----RVEQ-HGPAVPDRRTVAVVLGDGS 178
Query: 197 TLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSP 256
T+ AV+GADG+ R+ + + + + +P + ++ G P
Sbjct: 179 TVLARAVVGADGSAGRIGAHVGVKLDQVDLGLEAEIPVPPSVAEDWAGRVQLDWGP--MP 236
Query: 257 DFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLAT------RNRAKDKILGGKIIRVEAHPI 310
YGWVFPK D + VG +G K L + + I G + R A
Sbjct: 237 GSYGWVFPKGDTLTVGVICARGEGAATKRYLEDFIARLGLSGFEPSISSGHLTRCRAD-- 294
Query: 311 PEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
+ P R GRV + GDAAG + + EGI FA +SGR+ E + +E
Sbjct: 295 -DSPLSR---GRVVVCGDAAGLLEPWTREGISFALRSGRLAGEWAVRIAE 340
>gi|72163095|ref|YP_290752.1| geranylgeranyl reductase [Thermobifida fusca YX]
gi|71916827|gb|AAZ56729.1| geranylgeranyl reductase, plantal and prokaryotic [Thermobifida
fusca YX]
Length = 435
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 141/354 (39%), Gaps = 30/354 (8%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEF---DLPLDII 108
V V+G GPAG AA LA G++ L+E+ K CG + V + +P++
Sbjct: 21 VIVVGAGPAGSTAAHYLATAGLDVLLLEKTAFPREKVCGDGLTPRAVKQLVAMGIPINEE 80
Query: 109 DRKVTK--MKMISPSNVAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNGASVINGLF 165
D + +++I L + G+VR R D L A K G ++
Sbjct: 81 DGWIRNRGLRIIGGGTRLELPWPELSEYPGFGLVRTRYDFDQILARHAVKTGVRLLE--R 138
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINA---GDY 222
+ P E+ + + K G R+ V+ ADG +SR+A ++ D
Sbjct: 139 TNVTAPIIDERSNRVVGVQ---AKDAEGRIRSFRAPLVLAADGNSSRLAIALGIRRRDDR 195
Query: 223 DYAIAFQERVKIPDEKMVYYENLAEMY---VGDDVSPDFYGWVFPKCDHVA-VGTGTVTH 278
+A + P Y E+ E++ G V YGW+F D + VG G +
Sbjct: 196 PMGVAVRTYFTTPRHNDDYLESWLELWDTTDGKQVLLPGYGWIFGVGDGTSNVGLGILNS 255
Query: 279 KGDIKKFQLATRNRAKDKILGGKI----------IRVEAHPIPEHPRPRRLSGRVALVGD 328
+K R + + + IR A P+ + P G + LVGD
Sbjct: 256 TPAFQKIDYRKLLRRWTQSMPEEWGFTEENQKGPIRGAALPMGFNRTPHYARG-MMLVGD 314
Query: 329 AAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTY 382
A G V +GEGI +A ++GR+ A+ ++ T E L +Y E TY
Sbjct: 315 AGGMVNPFNGEGIAYAMEAGRIAADVAVQALSRPTPRDRERTLLRYPEILRDTY 368
>gi|239908959|ref|YP_002955701.1| geranylgeranyl reductase [Desulfovibrio magneticus RS-1]
gi|239798826|dbj|BAH77815.1| geranylgeranyl reductase [Desulfovibrio magneticus RS-1]
Length = 391
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 129/323 (39%), Gaps = 52/323 (16%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEF-----DLPLD 106
V ++G GPAG AA LA G ++++ + K C G + V D P
Sbjct: 7 VVIVGAGPAGSTAAHVLASRGASVLVLDKAEFPRDKLCAGLLTWKAVDVLERVFGDAPEG 66
Query: 107 IIDRKVTKMK----MISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVIN 162
++ V I + + G+ P + +R V D +L +RA K GA V
Sbjct: 67 LLASGVFNAAPAGYCIRFRDHIIAQGEMFYPFH---LTKRRVFDKHLADRAVKAGADV-- 121
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDY 222
++ L + P T DG R V+G DG S V ++
Sbjct: 122 ----RLGLAVSRVDPATGTVTTADG--------REFRGRYVLGCDGVASVVRRACPFDGA 169
Query: 223 DY------AIAF-----QERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAV 271
++ A+ F R+ P + E+ +Y G + YGWVFP D +A+
Sbjct: 170 NWKAGMGGALEFYIDRDDPRLAAPAHADLRAEH-PTVYAGFLRAG--YGWVFPHADRLAI 226
Query: 272 GTGTVTHKGDIKKFQLATRNRAKDKILGGKII-RVEAHPIP-----EHPRPRRLSGRVAL 325
G G + + ++F+ R L ++ + H +P E P GRV L
Sbjct: 227 GIGGHSARHG-REFRAKFREFVSFLGLPPELADAAKGHGLPYGNYIEKP----WHGRVML 281
Query: 326 VGDAAGYVTKCSGEGIYFAAKSG 348
GDAAG V GEGIY+A +SG
Sbjct: 282 AGDAAGLVETLFGEGIYYALRSG 304
>gi|209526795|ref|ZP_03275316.1| geranylgeranyl reductase [Arthrospira maxima CS-328]
gi|423066833|ref|ZP_17055623.1| geranylgeranyl reductase [Arthrospira platensis C1]
gi|209492756|gb|EDZ93090.1| geranylgeranyl reductase [Arthrospira maxima CS-328]
gi|406711598|gb|EKD06798.1| geranylgeranyl reductase [Arthrospira platensis C1]
Length = 363
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 122/309 (39%), Gaps = 68/309 (22%)
Query: 69 LAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPL-----DIIDRKVTKMKMISPSN 122
LAK G ++E+ KPCGG + + FD +D+ K+ P+
Sbjct: 20 LAKRGRNPLVVEKNSWPRNKPCGGGVSPAIAAWFDFDFTPAISTTVDKIRYTFKLADPAE 79
Query: 123 VAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYY 182
A+ KP + MVRR+V DA+L ++A+ GAS F+ +
Sbjct: 80 TAIS-----KP---MWMVRRDVFDAFLIQQAQDQGAS--------------FQPNTEVTA 117
Query: 183 TEYDGTKGGV--GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMV 240
E+ G + TL +I ADGA VA + R+K + ++
Sbjct: 118 IEFKGDSWQLTTANGETLTGRYLIAADGAKGPVASWL-------------RLKQSNPRLA 164
Query: 241 YYENLAEMYVGDDVSPDFYG-------WVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRA 293
++ DV +G W FPK D V T T K +N +
Sbjct: 165 MVTEATQL---SDVPTFEFGMVKNGSLWGFPKADGYTVSTTTFRGK--------EPKNLS 213
Query: 294 KDKILGGKIIRVEAH-PIPEHPR-----PRRLSGRVALV-GDAAGYVTKCSGEGIYFAAK 346
+D K + + + PI EHP R L + AL+ G+AA V SGEGI A
Sbjct: 214 QDLSQYLKALGLNPNSPIVEHPLRLWDGDRTLHSQNALIAGEAASIVDPLSGEGIRPAIL 273
Query: 347 SGRMCAEAI 355
+G AEAI
Sbjct: 274 TGIKAAEAI 282
>gi|124486209|ref|YP_001030825.1| excinuclease ABC subunit C [Methanocorpusculum labreanum Z]
gi|124363750|gb|ABN07558.1| geranylgeranyl reductase [Methanocorpusculum labreanum Z]
Length = 382
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 128/323 (39%), Gaps = 54/323 (16%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDIIDR 110
V VIGGGPAG AA AK G+ T ++E P C G + E ++ +
Sbjct: 4 VIVIGGGPAGSTAARICAKAGLSTRILEEHASIGYPVQCAGLLSNNAFAECEVSDRSVYN 63
Query: 111 KVTKMKMISPSNVAVDI-GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
V K+ ++ +T K + +V R LD + RA + GA +K
Sbjct: 64 TVRGAKICGSEGHSLSFDAKTTKAY----VVDRGRLDHEIAVRAAEAGAE----FSLKTC 115
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
+ + + +++ T GG + +I ADG S A+S+
Sbjct: 116 VTKLNPEKKIIH------TAGG----EEIPYTILIAADGPRSVAARSLG----------- 154
Query: 230 ERVKIPDEKMVYYENLAEM-YVGD--------DVSPDFYGWVFPKCDHVA-VGTGTVTHK 279
IP +Y AE+ + GD + +PDF+ WV P + A VG + +
Sbjct: 155 ----IPPSSYIYSGIQAEVPWDGDSSLVELHPNAAPDFFAWVIPLSEKRARVGLCGMKNV 210
Query: 280 GDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGE 339
D+ LA G ++ IP R + LVGDAAG+ SG
Sbjct: 211 PDLFAEFLAR--------FPGSVLHSVTGTIPLGIRRKTFGSGCMLVGDAAGFPKPTSGG 262
Query: 340 GIYFAAKSGRMCAEAIIEGSENG 362
G+Y +S R AE ++ +E G
Sbjct: 263 GVYTGIRSARFAAEIAVKSAETG 285
>gi|422451503|ref|ZP_16528205.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL030PA2]
gi|315108819|gb|EFT80795.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL030PA2]
Length = 425
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 154/392 (39%), Gaps = 55/392 (14%)
Query: 64 AAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVGEFDLPLDIIDR---KVTKMKMI 118
A A LA+ G+ L+E+ K CG G P + L +D+ + K T+ I
Sbjct: 25 ATAAHLARRGLHVTLLEKVTFPRDKVCGDGLTPRAVKQLIRLGIDVSEEAGWKHTEGLRI 84
Query: 119 SPSNVA--VDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMKMDLPRNFE 175
+A V L + GMV RR VLD L AE G +++ G N
Sbjct: 85 HGGRIAPFVLPWPELADYPNFGMVCRRTVLDERLARHAESQGVTLVEGA--------NVT 136
Query: 176 QPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYD-----YAIAFQE 230
P + G + G + + V V+ ADG +SR+ ++ D A+
Sbjct: 137 DPILDPSGRICGVRTSDGTEYSAPV--VVAADGNSSRLGLAMGLHKRDDRPMGVAVRAYY 194
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDF---YGWVFPKCD-HVAVGTGTVTHKGDIKKFQ 286
R + D + + E+ E++ G D YGW FP+ D V +G G + +
Sbjct: 195 RSALSDSRNL--ESWLELWDGPPQKSDLLPGYGWAFPEGDGTVNIGLGMLDSSAAFGRTD 252
Query: 287 LATRNRAKDKILGGKI----------IRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKC 336
+ + L + IR A P+ + +P G + LVGDA G V
Sbjct: 253 YRSLMKRWLSHLPAEWTLDEEHREGPIRGAALPMAFNRQPHYRDG-LLLVGDAGGMVNPF 311
Query: 337 SGEGIYFAAKSGRMCAEAIIEGSENGTRM-IDEGDLRKYLEKWDKTYWPTYKVLDVLQKV 395
+GEGI +A ++G M A+AI E G R E L+ Y + + Y++ +
Sbjct: 312 NGEGIDYAMEAGEMAADAIAEAHYRGHRTPAAEKALQGYPRALQRHFGGYYRLGTI---- 367
Query: 396 FYRSNPAREAFVEMCADEYVQKMTFDSYLYKR 427
FV + D V KM L +R
Sbjct: 368 ----------FVRLIGDPRVMKMCTTYGLPRR 389
>gi|422386195|ref|ZP_16466316.1| putative monooxygenase, FAD-binding [Propionibacterium acnes
HL096PA3]
gi|422387477|ref|ZP_16467592.1| putative monooxygenase, FAD-binding [Propionibacterium acnes
HL096PA2]
gi|422392257|ref|ZP_16472330.1| putative monooxygenase, FAD-binding [Propionibacterium acnes
HL099PA1]
gi|422425377|ref|ZP_16502312.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL043PA1]
gi|422426496|ref|ZP_16503417.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL087PA1]
gi|422430119|ref|ZP_16507005.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL072PA2]
gi|422433632|ref|ZP_16510498.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL059PA2]
gi|422436324|ref|ZP_16513174.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL083PA2]
gi|422438544|ref|ZP_16515386.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL092PA1]
gi|422442022|ref|ZP_16518828.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL002PA1]
gi|422445349|ref|ZP_16522098.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL027PA1]
gi|422448257|ref|ZP_16524987.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL036PA3]
gi|422453895|ref|ZP_16530577.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL087PA3]
gi|422460236|ref|ZP_16536876.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL038PA1]
gi|422475344|ref|ZP_16551797.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL056PA1]
gi|422477545|ref|ZP_16553971.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL007PA1]
gi|422479860|ref|ZP_16556267.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL063PA1]
gi|422482254|ref|ZP_16558652.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL036PA1]
gi|422486372|ref|ZP_16562724.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL043PA2]
gi|422487024|ref|ZP_16563362.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL013PA2]
gi|422490302|ref|ZP_16566618.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL020PA1]
gi|422493767|ref|ZP_16570065.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL086PA1]
gi|422495055|ref|ZP_16571348.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL025PA1]
gi|422499070|ref|ZP_16575340.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL002PA3]
gi|422502862|ref|ZP_16579106.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL027PA2]
gi|422506803|ref|ZP_16583025.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL036PA2]
gi|422507179|ref|ZP_16583389.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL046PA2]
gi|422511688|ref|ZP_16587829.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL059PA1]
gi|422514548|ref|ZP_16590668.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL087PA2]
gi|422515301|ref|ZP_16591415.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL110PA2]
gi|422517481|ref|ZP_16593575.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL074PA1]
gi|422521054|ref|ZP_16597091.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL045PA1]
gi|422522561|ref|ZP_16598584.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL053PA2]
gi|422526480|ref|ZP_16602476.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL083PA1]
gi|422529159|ref|ZP_16605130.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL053PA1]
gi|422530867|ref|ZP_16606823.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL110PA1]
gi|422533454|ref|ZP_16609389.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL072PA1]
gi|422536944|ref|ZP_16612833.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL078PA1]
gi|422540513|ref|ZP_16616379.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL013PA1]
gi|422540907|ref|ZP_16616768.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL037PA1]
gi|422544948|ref|ZP_16620779.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL082PA1]
gi|422546667|ref|ZP_16622492.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL050PA3]
gi|422548776|ref|ZP_16624585.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL050PA1]
gi|422553548|ref|ZP_16629331.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL005PA3]
gi|422555734|ref|ZP_16631498.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL005PA2]
gi|422558705|ref|ZP_16634443.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL025PA2]
gi|422559718|ref|ZP_16635443.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL005PA1]
gi|422561642|ref|ZP_16637326.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL046PA1]
gi|422566669|ref|ZP_16642300.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL002PA2]
gi|422571404|ref|ZP_16646989.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL067PA1]
gi|422577430|ref|ZP_16652963.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL005PA4]
gi|313763283|gb|EFS34647.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL013PA1]
gi|313773329|gb|EFS39295.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL074PA1]
gi|313793609|gb|EFS41649.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL110PA1]
gi|313802880|gb|EFS44093.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL110PA2]
gi|313806326|gb|EFS44842.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL087PA2]
gi|313810768|gb|EFS48482.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL083PA1]
gi|313813673|gb|EFS51387.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL025PA1]
gi|313814977|gb|EFS52691.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL059PA1]
gi|313819437|gb|EFS57151.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL046PA2]
gi|313821243|gb|EFS58957.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL036PA1]
gi|313822302|gb|EFS60016.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL036PA2]
gi|313826140|gb|EFS63854.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL063PA1]
gi|313831079|gb|EFS68793.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL007PA1]
gi|313833209|gb|EFS70923.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL056PA1]
gi|313838148|gb|EFS75862.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL086PA1]
gi|314916737|gb|EFS80568.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL005PA4]
gi|314919137|gb|EFS82968.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL050PA1]
gi|314921217|gb|EFS85048.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL050PA3]
gi|314925989|gb|EFS89820.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL036PA3]
gi|314930355|gb|EFS94186.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL067PA1]
gi|314956138|gb|EFT00534.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL027PA1]
gi|314959671|gb|EFT03773.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL002PA1]
gi|314962245|gb|EFT06346.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL002PA2]
gi|314963241|gb|EFT07341.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL082PA1]
gi|314969784|gb|EFT13882.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL037PA1]
gi|314973937|gb|EFT18033.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL053PA1]
gi|314976865|gb|EFT20960.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL045PA1]
gi|314979330|gb|EFT23424.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL072PA2]
gi|314984987|gb|EFT29079.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL005PA1]
gi|314986339|gb|EFT30431.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL005PA2]
gi|314988565|gb|EFT32656.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL005PA3]
gi|315079682|gb|EFT51670.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL053PA2]
gi|315081010|gb|EFT52986.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL078PA1]
gi|315083927|gb|EFT55903.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL027PA2]
gi|315085064|gb|EFT57040.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL002PA3]
gi|315089493|gb|EFT61469.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL072PA1]
gi|315097688|gb|EFT69664.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL038PA1]
gi|315098105|gb|EFT70081.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL059PA2]
gi|315102677|gb|EFT74653.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL046PA1]
gi|327325708|gb|EGE67505.1| putative monooxygenase, FAD-binding [Propionibacterium acnes
HL096PA3]
gi|327330844|gb|EGE72589.1| putative monooxygenase, FAD-binding [Propionibacterium acnes
HL096PA2]
gi|327442863|gb|EGE89517.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL043PA2]
gi|327445255|gb|EGE91909.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL043PA1]
gi|327447759|gb|EGE94413.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL013PA2]
gi|327451630|gb|EGE98284.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL087PA3]
gi|327452283|gb|EGE98937.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL083PA2]
gi|327452500|gb|EGE99154.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL092PA1]
gi|328752322|gb|EGF65938.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL025PA2]
gi|328755060|gb|EGF68676.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL020PA1]
gi|328757008|gb|EGF70624.1| geranylgeranyl reductase family protein [Propionibacterium acnes
HL087PA1]
gi|328761544|gb|EGF75062.1| putative monooxygenase, FAD-binding [Propionibacterium acnes
HL099PA1]
Length = 425
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 154/392 (39%), Gaps = 55/392 (14%)
Query: 64 AAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVGEFDLPLDIIDR---KVTKMKMI 118
A A LA+ G+ L+E+ K CG G P + L +D+ + K T+ I
Sbjct: 25 ATAAHLARRGLHVTLLEKVTFPRDKVCGDGLTPRAVKQLIRLGIDVSEEAGWKHTEGLRI 84
Query: 119 SPSNVA--VDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMKMDLPRNFE 175
+A V L + GMV RR VLD L AE G +++ G N
Sbjct: 85 HGGRIAPFVLPWPELADYPNFGMVCRRTVLDERLARHAESQGVTLVEGA--------NVT 136
Query: 176 QPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYD-----YAIAFQE 230
P + G + G + + V V+ ADG +SR+ ++ D A+
Sbjct: 137 DPILDPSGRICGVRTSDGTEYSAPV--VVAADGNSSRLGLAMGLHKRDDRPMGVAVRAYY 194
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDF---YGWVFPKCD-HVAVGTGTVTHKGDIKKFQ 286
R + D + + E+ E++ G D YGW FP+ D V +G G + +
Sbjct: 195 RSALSDSRNL--ESWLELWDGAPQKSDLLPGYGWAFPEGDGTVNIGLGMLDSSAAFGRTD 252
Query: 287 LATRNRAKDKILGGKI----------IRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKC 336
+ + L + IR A P+ + +P G + LVGDA G V
Sbjct: 253 YRSLMKRWLSHLPAEWTLDEEHREGPIRGAALPMAFNRQPHYRDG-LLLVGDAGGMVNPF 311
Query: 337 SGEGIYFAAKSGRMCAEAIIEGSENGTRM-IDEGDLRKYLEKWDKTYWPTYKVLDVLQKV 395
+GEGI +A ++G M A+AI E G R E L+ Y + + Y++ +
Sbjct: 312 NGEGIDYAMEAGEMAADAIAEAHYRGHRTPAAEKALQGYPRALQRHFGGYYRLGTI---- 367
Query: 396 FYRSNPAREAFVEMCADEYVQKMTFDSYLYKR 427
FV + D V KM L +R
Sbjct: 368 ----------FVRLIGDPRVMKMCTTYGLPRR 389
>gi|386394596|ref|ZP_10079377.1| geranylgeranyl reductase family protein [Desulfovibrio sp. U5L]
gi|385735474|gb|EIG55672.1| geranylgeranyl reductase family protein [Desulfovibrio sp. U5L]
Length = 390
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 129/329 (39%), Gaps = 54/329 (16%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLDIIDRKVT 113
++G GPAG AA LA+ G L+++ K C G + V D+++R
Sbjct: 9 IVGAGPAGSTAARVLARIGANVLLLDKAPFPRDKLCAGLLTWKSV-------DVLERAYG 61
Query: 114 K----------MKMISPSNVAVDIGQTLKPHEY---IGMVRREVLDAYLRERAEKNGASV 160
SP G+T+ E R V D +L ++A K GA V
Sbjct: 62 DTAEGLLASGVFNAASPGYRIRFRGRTIAAGELFYPFHFTERRVFDKHLLDQAVKAGADV 121
Query: 161 INGLFMKMDLPRNFEQPYVLYYTEYDGTKGGV--GEKRTLEVDAVIGADGANSRVAKS-- 216
G + + D G V + R VIGADG S V ++
Sbjct: 122 RTGCAV----------------SAVDPATGLVRLADGREFTGRHVIGADGVASLVRRACP 165
Query: 217 INAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDD--VSPDF----YGWVFPKCDHVA 270
++ + + + +P + + E D V F YGWVFP D +A
Sbjct: 166 FSSASWREGLGGGMELYLPRDDARLSGPVHEDLRADSPTVYAGFLRAGYGWVFPHRDVLA 225
Query: 271 VGTG--TVTHKGDIKKFQLATRNRAKDKILGGKII-RVEAHPIP-EHPRPRRLSGRVALV 326
+G G +V H K+F++ R L ++ H +P + R GR L
Sbjct: 226 IGIGGHSVRHG---KEFRIKFREFLAFLGLPPELADTARGHGLPYGNYLTRPWHGRTLLA 282
Query: 327 GDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
GDAAG V GEGIY+A +SG + +A+
Sbjct: 283 GDAAGLVETLFGEGIYYALRSGELAGQAV 311
>gi|126695884|ref|YP_001090770.1| NAD binding site [Prochlorococcus marinus str. MIT 9301]
gi|126542927|gb|ABO17169.1| NAD binding site [Prochlorococcus marinus str. MIT 9301]
Length = 377
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 150/368 (40%), Gaps = 64/368 (17%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPLDIIDRK 111
V +IGGG +G + A L+K G +IE+ K + K C G + M + LPLDI D
Sbjct: 6 VVIIGGGLSGSSTALNLSKKGYSVLIIEKEKFQDYKACAGGMASSM--QRFLPLDIKDSI 63
Query: 112 VTKMKMISPSNVAVD-IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+K+K + A D + L +++RE LD L + + NGA +I L ++ +
Sbjct: 64 ESKIKNVEFRWKASDNVTADLTGESPFWIIKREKLDQLLLDESLSNGAHIIRPLLIEKII 123
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
+N D + K + ++ ADG+ S+ A ++ G
Sbjct: 124 KKN------------DKWEITCNNKIKYIAEFLVIADGSQSKWASHLHLG--------PR 163
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDF------YGWVFPKCDHVAVGTGTVTHKGDIKK 284
+ K + + + L E+ D V +F + W FP + + +G GT + G ++
Sbjct: 164 KPKFANTISLRLKGLGEI-PRDAVRFEFGFIKYGFAWAFPLRESLNIGLGTFINNGLLE- 221
Query: 285 FQLATRNRAKDKILGGKIIRVEAH-PIPEHPRPRRL----------SGRVALVGDAAGYV 333
N+A +K ++IR P ++L +V VGDAA
Sbjct: 222 ------NQAINK----QVIRSFGFDDFPNKVISKKLRIWNGFHSINGDKVLAVGDAASLC 271
Query: 334 TKCSGEGIYFAAKSGRMCAEAI---IEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLD 390
EGI + S AE I + G E+ +L Y +K + + +
Sbjct: 272 DPFLAEGIRPSLISSFYAAEYIDQCLSGKED--------NLNLYTKKINNIWGKSMAWGR 323
Query: 391 VLQKVFYR 398
+ +VFYR
Sbjct: 324 RIAQVFYR 331
>gi|407005011|gb|EKE21238.1| geranylgeranyl reductase [uncultured bacterium]
Length = 394
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 132/326 (40%), Gaps = 49/326 (15%)
Query: 53 VAVIGGGPAGGAAA---ETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIID 109
V ++G GPAG AA E L V+ F R K CGG L ++ L L+
Sbjct: 13 VVIVGAGPAGSTAAFYTENLKVLIVDKFDFPRH----KACGGG--LMSSKDWSLELENYK 66
Query: 110 RKVTKMKMISPSNVAVDIGQTLKP-----HEYIGMVRREVLDAYLRERAEKNGASVINGL 164
R ++K S ++ + + H + + R E + L+E +K N
Sbjct: 67 RIKDELKSYSCRSIKMYWNKMFVAKCDFKHLFDQVDRYEFDNLLLKEALKKE-----NVK 121
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSI-NAGDYD 223
F+K DL + E+ + + + G V +E D +IGADG S+V+K + N
Sbjct: 122 FLKFDL-QTIEKKRLNGKDVFKLSDGQV----EIETDYIIGADGMYSKVSKFLGNKNHKR 176
Query: 224 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV------- 276
+ + +I EK ++L V YGW+FP + VG G +
Sbjct: 177 HQFGYCMEYEITCEK----KDLNVHVVAGYKWEIGYGWIFPTLNGYQVGIGIIRKPRKSL 232
Query: 277 -THKGDIKKF----QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAG 331
+ D + +L + +K GG +P + + L GDA G
Sbjct: 233 NYYLDDFLAWSSEKELIPKEYVIEKRFGG--------ALPLKVVKNYCTDNILLCGDAMG 284
Query: 332 YVTKCSGEGIYFAAKSGRMCAEAIIE 357
V +GEGIY+A KSG+ + + E
Sbjct: 285 LVKLLTGEGIYYAMKSGKAAGQTLTE 310
>gi|365965819|ref|YP_004947384.1| geranylgeranyl reductase [Propionibacterium acnes TypeIA2 P.acn17]
gi|365742500|gb|AEW82194.1| geranylgeranyl reductase family protein [Propionibacterium acnes
TypeIA2 P.acn17]
Length = 420
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 154/392 (39%), Gaps = 55/392 (14%)
Query: 64 AAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVGEFDLPLDIIDR---KVTKMKMI 118
A A LA+ G+ L+E+ K CG G P + L +D+ + K T+ I
Sbjct: 20 ATAAHLARRGLHVTLLEKVTFPRDKVCGDGLTPRAVKQLIRLGIDVSEEAGWKHTEGLRI 79
Query: 119 SPSNVA--VDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMKMDLPRNFE 175
+A V L + GMV RR VLD L AE G +++ G N
Sbjct: 80 HGGRIAPFVLPWPELADYPNFGMVCRRTVLDERLARHAESQGVTLVEGA--------NVT 131
Query: 176 QPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYD-----YAIAFQE 230
P + G + G + + V V+ ADG +SR+ ++ D A+
Sbjct: 132 DPILDPSGRICGVRTSDGTEYSAPV--VVAADGNSSRLGLAMGLHKRDDRPMGVAVRAYY 189
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDF---YGWVFPKCD-HVAVGTGTVTHKGDIKKFQ 286
R + D + + E+ E++ G D YGW FP+ D V +G G + +
Sbjct: 190 RSALSDSRNL--ESWLELWDGPPQKSDLLPGYGWAFPEGDGTVNIGLGMLDSSAAFGRTD 247
Query: 287 LATRNRAKDKILGGKI----------IRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKC 336
+ + L + IR A P+ + +P G + LVGDA G V
Sbjct: 248 YRSLMKRWLSHLPAEWTLDEEHREGPIRGAALPMAFNRQPHYRDG-LLLVGDAGGMVNPF 306
Query: 337 SGEGIYFAAKSGRMCAEAIIEGSENGTRM-IDEGDLRKYLEKWDKTYWPTYKVLDVLQKV 395
+GEGI +A ++G M A+AI E G R E L+ Y + + Y++ +
Sbjct: 307 NGEGIDYAMEAGEMAADAIAEAHYRGHRTPAAEKALQGYPRALQRHFGGYYRLGTI---- 362
Query: 396 FYRSNPAREAFVEMCADEYVQKMTFDSYLYKR 427
FV + D V KM L +R
Sbjct: 363 ----------FVRLIGDPRVMKMCTTYGLPRR 384
>gi|307352942|ref|YP_003893993.1| geranylgeranyl reductase [Methanoplanus petrolearius DSM 11571]
gi|307156175|gb|ADN35555.1| geranylgeranyl reductase [Methanoplanus petrolearius DSM 11571]
Length = 388
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 132/339 (38%), Gaps = 43/339 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDIIDR 110
V V GGGPAG AA+ AK G+ T L+E P C G + E ++ + +
Sbjct: 5 VIVAGGGPAGSMAAKCCAKAGLNTLLVEEHAAVGTPVQCAGLLSTNAFFECEVSDRSVIQ 64
Query: 111 KVTKMKMIS--PSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
V+ +++S + D G+ +K + +V R D + E A GA ++ +
Sbjct: 65 TVSGARVVSGLSCEFSFDAGE-IKAY----VVDRSAFDREMLEAAANAGAEIMLKTSVNG 119
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
+ N + + GV K+ ++ ADG S ++ A F
Sbjct: 120 AIADN---------SGCTVSTTGVSGKQNFRSKMIVAADGPRSNFSRFFG---MKRAPVF 167
Query: 229 QERVKIPDEKMVYYEN---LAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKF 285
++ V YE+ L E++ SP F+GWV P G V +
Sbjct: 168 LSGIQAD----VPYESDGRLVELH--PYASPGFFGWVIP----AGKGRARVGLCAEKDTN 217
Query: 286 QLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAA 345
+L T+ K G + IP PR R GDAAG+ SG G+Y
Sbjct: 218 ELFTQFI---KQFGPTNVHQVTGTIPIGIMPRTYGNRTLFCGDAAGFAKPTSGGGVYTGV 274
Query: 346 KSGRMCAEAIIEGSENGTRMIDEGD--LRKYLEKWDKTY 382
+S R A+ I E+G D GD L +Y W +
Sbjct: 275 RSARHAADTIAGCIESG----DFGDRALSRYESLWKADF 309
>gi|52548829|gb|AAU82678.1| conserved hypothetical protein [uncultured archaeon GZfos19A5]
Length = 428
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 140/338 (41%), Gaps = 53/338 (15%)
Query: 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIP--------LCMV 98
R + V+GGGPAG AA+ AK G T +IE +P C G I L
Sbjct: 9 REYDIVVVGGGPAGCMAAKYAAKAGASTLIIEENPAIGEPVQCAGLISKRAIEESELKNT 68
Query: 99 GEF---DLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEK 155
G F +L I+ + ++++ PS P + +RR++ D L + A
Sbjct: 69 GSFVNCELKGAIVHSQSHELRIEVPS-----------PEKSAFAIRRDIFDKELAKAAMD 117
Query: 156 NGASVI-NGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVG-EKRTLEVDAVIGADGANSRV 213
GA +I N + + + T GV E+ ++ + VIGADG S +
Sbjct: 118 EGAELILNSRVKHVKKGGERDSAKLTILAAATTTNAGVNLEENEIKANVVIGADGWRSGI 177
Query: 214 AKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA--- 270
A+ F V+I + + +E +A+++VG ++P F+ WV P + A
Sbjct: 178 AR---MAGLTVTKNFLNCVQIEGQYEI-HEPVADIFVGKTIAPGFFAWVIPIGETTARIG 233
Query: 271 --VGTGTVTHKGDIKKFQ--------LATRNRA-KDKILGGKIIRVEAHPIPEHPRPRRL 319
+ TH + + +A + + + K G I PIP +
Sbjct: 234 LCIDKRFSTHPNPLPFLKRILSEHPVIAKKYKGTQSKFTAGAI------PIPTERQKTVK 287
Query: 320 SGR---VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEA 354
+G + LVGDAA V +G G+Y+ K G++ EA
Sbjct: 288 TGDGTGILLVGDAAAQVKPITGGGVYYGMKCGKIAGEA 325
>gi|121604250|ref|YP_981579.1| geranylgeranyl reductase [Polaromonas naphthalenivorans CJ2]
gi|120593219|gb|ABM36658.1| geranylgeranyl reductase [Polaromonas naphthalenivorans CJ2]
Length = 411
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 149/350 (42%), Gaps = 53/350 (15%)
Query: 42 TSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCG-GAIPLCMVG 99
+S +L + V VIG GP+G AAA TLAK G++ LI++ K CG G IP
Sbjct: 3 SSIELLPKTCDVLVIGAGPSGSAAAFTLAKTGLDVVLIDQHAFPRDKICGDGLIPDAHKA 62
Query: 100 EFDLP-LDIIDRKVTK---MKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEK 155
L LD + R+ + ISP +D+ TL ++ R+ LD + + A
Sbjct: 63 LDRLGVLDEVMRQAHSSEFLSCISPRGGRIDVAGTL------AVLPRKQLDDIVCKAAVA 116
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGV-----GEKRTLEVDAVIGADGAN 210
GA +M P F P E +G G G + L VI A GA
Sbjct: 117 AGA--------RMFAPVRFTAPI-----EENGKVTGARLAQSGHECELRATWVILATGAV 163
Query: 211 SRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHV- 269
+ + + A R I ++ M + E+ ++P YGW+FP + V
Sbjct: 164 PQALMAAGMAERHTPSAIAMRCYIKNDAMASRIDKLEVIWHKALAPG-YGWIFPCGNGVF 222
Query: 270 AVGTGTVTH------KGDIKKFQLATRNR-------------AKDKILGG-KIIRVEAHP 309
VG G + K D + + T N A++ + GG ++ ++ P
Sbjct: 223 NVGVGILAAPDDPAGKRDTSQGKAGTANLRQMFEALGTLSEPARELMAGGTRLSPLKGAP 282
Query: 310 IPEHPRPRRLSGRVALV-GDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEG 358
+ + +LS LV G+AAG SGEGI A ++G + AEAI++G
Sbjct: 283 LRCSLQGAQLSRPGLLVTGEAAGSTYAFSGEGIGKALETGILAAEAILQG 332
>gi|297569310|ref|YP_003690654.1| HI0933 family protein [Desulfurivibrio alkaliphilus AHT2]
gi|296925225|gb|ADH86035.1| HI0933 family protein [Desulfurivibrio alkaliphilus AHT2]
Length = 347
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 131/327 (40%), Gaps = 77/327 (23%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVT 113
+IG GPAG A A LA G E ++ER KPC G +P + E D+P ++++R
Sbjct: 10 IIGAGPAGLACATALAAAGREVLVLERLSTAGPKPCAGGVPAGSL-EPDMPPELLERSFH 68
Query: 114 KMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRN 173
+ ++++ A Q I + RE L +++++RAE GA +
Sbjct: 69 RQRIVT----ACQDFQFQGEDPIIHTINRERLGSWMQQRAEAAGAVI------------- 111
Query: 174 FEQPYVLYYTEYDGTKGGVGEKRTLEVDA-------VIGADGANSRVAKSINAGDYDYAI 226
GT+ RTL D ++GADG+NS V + + I
Sbjct: 112 -----------QTGTRALRINGRTLTTDQGEISFQYLVGADGSNSLVRRHLGLPLVLAGI 160
Query: 227 AFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQ 286
+V +M ++ L G Y W+FP D +VG
Sbjct: 161 GITYQVPGHFPEMEWH--LQPRLFGSG-----YAWIFPHRDSASVGV------------- 200
Query: 287 LATRNRAKDKILGGKI--------IRVEAHPIPEHPRPRRLS--------GRVALVGDAA 330
A R R + +L ++ +R++ PR +S G + L GDAA
Sbjct: 201 YAFRRRQRSHLLHDRLHLWAEKRGLRLDQ----ARPRASLVSFDYRGSRFGSLFLAGDAA 256
Query: 331 GYVTKCSGEGIYFAAKSGRMCAEAIIE 357
G + +GEGI A SGR A I++
Sbjct: 257 GLASGLTGEGIAAALYSGRAVAATILK 283
>gi|315427191|dbj|BAJ48805.1| geranylgeranyl reductase [Candidatus Caldiarchaeum subterraneum]
gi|315427251|dbj|BAJ48864.1| geranylgeranyl reductase [Candidatus Caldiarchaeum subterraneum]
gi|315428158|dbj|BAJ49743.1| geranylgeranyl reductase [Candidatus Caldiarchaeum subterraneum]
gi|343485807|dbj|BAJ51461.1| geranylgeranyl reductase [Candidatus Caldiarchaeum subterraneum]
Length = 379
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 37/219 (16%)
Query: 195 KRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERV----KIPDEKMVYYENLAEMYV 250
+ T + VIGADG NS VA+S+ + I + + ++ + V + Y+
Sbjct: 132 RDTYKAKVVIGADGYNSTVARSLGVTERPEPIPTVQYIMANCRLKNSDAVRF------YL 185
Query: 251 GDDVSPDFYGWVFPKCDHVA-VGTGTVTHKGDIKKFQL-ATRNRAKDKILGGKIIRVEAH 308
G+ ++P Y W+FP+ + +A VG G +G + K L A D++ KII
Sbjct: 186 GNKIAPGGYAWIFPRTEKLAEVGIGV---RGAVAKDYLDAFVKLFSDELGNAKIIDYRGA 242
Query: 309 PIPEHPRPRRLSGRVA--------LVGDAAGYVTKCSGEGIYFAAK----SGRMCAEAII 356
P+P + G ++ L+GDAAG+V +G GI+ + +G++ A A+
Sbjct: 243 PVP-------IGGAISESVFDGAMLIGDAAGHVIPLTGAGIHSSVSAGLAAGKVAATAVQ 295
Query: 357 EGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKV 395
EG + R+ + K E W + K + ++K+
Sbjct: 296 EGDTSKRRL---SEFYKLYEPWLNRIKKSLKAMRAVEKL 331
>gi|256810538|ref|YP_003127907.1| geranylgeranyl reductase [Methanocaldococcus fervens AG86]
gi|256793738|gb|ACV24407.1| geranylgeranyl reductase [Methanocaldococcus fervens AG86]
Length = 386
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 152/364 (41%), Gaps = 57/364 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDIIDR 110
V +IGGGP G E + KNG ++E P C G I E P +++
Sbjct: 6 VVIIGGGPVGCITGENI-KNG-RVLIVEEHQSIGVPLQCAGLISKNGAKELGNPKGVVN- 62
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
KV + S SN+ + ++ + + R+V+D + RA K ++
Sbjct: 63 KVRGAYICSKSNMVKIGNEEIRAYVF----ERKVMDKDIAIRAGKKCDFLLKA------- 111
Query: 171 PRNFEQPYVLYYTEYDGTKGG-------VGEKRTLEVDAVIGADGANSRVAKS---INAG 220
Y E + K G +GEK L + V+GADG+ + K +N
Sbjct: 112 -----------YGEIEKDKKGYKVKISHLGEKIYLNPEVVVGADGSKTITGKKLGLVNNK 160
Query: 221 DYDYAIAFQ-ERVKIP-DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCD-HVAVGT---G 274
+ + + Q E V D+ VY +++ S F+ W+ P D V VG G
Sbjct: 161 NREILSSCQFEMVNADCDDDFVY------VFLDKRYSERFFTWIIPMGDDRVRVGLLDRG 214
Query: 275 TVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVT 334
+K + KF + AK+ + I + +P R + V LVGDAA +V
Sbjct: 215 NCYNK--LMKF-INENETAKEILKNATITEFSSGSLPIGYLERSVKDNVLLVGDAACHVK 271
Query: 335 KCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQK 394
SG G+YF A G++ E II NG ID +L Y +KW + + K +++K
Sbjct: 272 PLSGGGLYFGAVGGKIAGE-IISRYLNGE--ID--NLELYDKKWKEEFGNEIKNSLIIRK 326
Query: 395 VFYR 398
+F +
Sbjct: 327 LFLK 330
>gi|357391409|ref|YP_004906250.1| putative geranylgeranyl reductase [Kitasatospora setae KM-6054]
gi|311897886|dbj|BAJ30294.1| putative geranylgeranyl reductase [Kitasatospora setae KM-6054]
Length = 425
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 148/356 (41%), Gaps = 35/356 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVGEFDLPLDIIDR 110
V V+G GPAG + A LA+ G++ L+E+ + K CG G P + D+ +D+
Sbjct: 12 VIVVGAGPAGASTAYWLAQAGLDVLLLEKTEFPREKVCGDGLTPRAVKQLVDMGIDVSAD 71
Query: 111 KVTKMKMISPSNVAVDI---GQTLKPHEYIGMVRREV-LDAYLRERAEKNGASVINGLFM 166
+ K + V + L G+VR+ D L +A+K GA +
Sbjct: 72 GWLRNKGLRIIGGGVRLELDWPDLAAFPDYGLVRKRADFDELLARQAQKAGARLYENC-- 129
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGVG-EKRTLEVDA--VIGADGANSRVAKSINAGDYD 223
N P G +G +KR +E A V+ ADG ++R++ ++ +
Sbjct: 130 ------NVSGPVKDRAGRITGVTAKLGPDKREVEFHAPLVVAADGNSTRLSLAMGLHRME 183
Query: 224 ---YAIAFQERVKIPDEKMVYYENLAEMY---VGDDVSPDFYGWVFPKCDHVA-VGTGTV 276
+A++ P Y E+ E++ G YGW+F D + VG G +
Sbjct: 184 SRPMGVAYRTYFTSPRHDDDYLESWLELWDTRGGQKKLLPGYGWIFGMGDGTSNVGLGIL 243
Query: 277 THK---GDIKKFQLATRNRAKDKILGG-------KIIRVEAHPIPEHPRPRRLSGRVALV 326
GD+ ++ A G + IR A P+ + +P G + LV
Sbjct: 244 NSSPAFGDLNWREVLKSWCASMPEEWGYTPDNMTEPIRGAALPMAFNRQPHYTKG-LLLV 302
Query: 327 GDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTY 382
GDA G V +GEGI +A +SG++ A I++ T E L +Y + TY
Sbjct: 303 GDAGGMVNPFNGEGIAYAMESGQLAAGVIVQAMARITPEGRERALARYPQLLKDTY 358
>gi|302562034|ref|ZP_07314376.1| geranylgeranyl reductase [Streptomyces griseoflavus Tu4000]
gi|302479652|gb|EFL42745.1| geranylgeranyl reductase [Streptomyces griseoflavus Tu4000]
Length = 410
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 132/312 (42%), Gaps = 65/312 (20%)
Query: 77 FLIER-KLDNCKPCGGAI--PL--CMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTL 131
L+E+ +L K CGG I P + F+LPL DR V + S + +T
Sbjct: 41 LLLEKAELPRYKTCGGGIIGPSRDALPPGFELPLK--DR-VHAVTFSSNGRFS----RTR 93
Query: 132 KPHEYI-GMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKG 190
+ + + G++ R D L E A+K GA + G+ ++ E G+
Sbjct: 94 RSRQMLFGLINRPEFDQQLVEHAQKAGAELRTGVAVQ--------------RVEQHGSA- 138
Query: 191 GVGEKRTLEV----------DAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMV 240
V ++RT+ V AV+GADG+ R+ + + + + +P+ V
Sbjct: 139 -VPDRRTVAVVLQGGETVLARAVVGADGSAGRIGAHVGVKLDQVDLGLEAEIPVPE--TV 195
Query: 241 YYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD-----------IKKFQLAT 289
+ + + P YGWVFPK D + VG ++ +G+ I + LA
Sbjct: 196 ADDWKGRVLIDWGPMPGSYGWVFPKGDTLTVGV--ISRRGEGAATKRYLEDFIGRLGLAG 253
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSGEGIYFAAKSG 348
+ I G + R A P LS GRV + GDAAG + + EGI FA +SG
Sbjct: 254 ---FEPSISSGHLTRCRADDSP-------LSRGRVLVCGDAAGMLEPWTREGISFALRSG 303
Query: 349 RMCAEAIIEGSE 360
R+ E + +E
Sbjct: 304 RLAGEWAVRIAE 315
>gi|379737779|ref|YP_005331285.1| geranylgeranyl reductase [Blastococcus saxobsidens DD2]
gi|378785586|emb|CCG05259.1| Geranylgeranyl reductase [Blastococcus saxobsidens DD2]
Length = 423
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 139/323 (43%), Gaps = 35/323 (10%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVGEFDLPLDIIDR 110
V V+G GPAG +AA LA++G++ ++E+ + K CG G P + D+ +D
Sbjct: 12 VVVVGAGPAGSSAAWHLAQSGLDVAVLEKAEFPREKVCGDGLTPRGVKALQDMDVDTSSP 71
Query: 111 KVTK---MKMISPSNVAVDIGQTLKPHEYIGMVR-REVLDAYLRERAEKNGASVINGLFM 166
+ +++ VA L G+VR R LDA L A + GA + G
Sbjct: 72 GWVRRRGLRVHGGGRVAEVDWPRLASWPDHGLVRTRRELDALLAGHAVEAGARLTTGT-- 129
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGVGEKR---TLEVDAVIGADGANSRVAKSINA---G 220
+P + G + VG+ R T V+ A+G + R+AK++
Sbjct: 130 ------TVTEPLLDDAGRVVGVRAEVGDDREPVTWRAPLVVSAEGLSGRLAKTLGLLRRT 183
Query: 221 DYDYAIAFQERVKIPDEKMVYYENLAEMYVGD---DVSPDFYGWVFPKCDHVA-VGTGTV 276
D +A + V+ Y + ++ G D P YGW+F D A VG G +
Sbjct: 184 DRPLGVAVRGYVRSRRSGDDYLDIAFDLTAGGPTRDCMPG-YGWIFGMGDGTANVGYGLL 242
Query: 277 -THKGDIKKFQLATRNR-----AKDKILGGKII---RVEAHPIPEHPRPRRLSGRVALVG 327
T +G + R+ A+D + G + R P+ P G + L G
Sbjct: 243 DTRRGTGADRKAILRHWLDTFPAEDGLGEGDAVGPLRGAGLPMALSRGPAYTRG-LLLAG 301
Query: 328 DAAGYVTKCSGEGIYFAAKSGRM 350
DAAG V C+GEGI +A +SGRM
Sbjct: 302 DAAGTVNPCNGEGISYAIESGRM 324
>gi|303246942|ref|ZP_07333218.1| FAD dependent oxidoreductase [Desulfovibrio fructosovorans JJ]
gi|302491649|gb|EFL51532.1| FAD dependent oxidoreductase [Desulfovibrio fructosovorans JJ]
Length = 435
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 158/366 (43%), Gaps = 53/366 (14%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPLCMVGEFDLPLDI---- 107
V VIGGG AG A LA+ G + LIER K G I C V E P +
Sbjct: 12 VIVIGGGVAGTVCAHQLAQAGKQVILIERGGQPGAKNLSGGIFYCRVMEQVFPDFVGEAP 71
Query: 108 IDRKVTK--MKMISP-SNVAVDI-GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVING 163
++R++T+ + ++P S+ VD Q L V R LDA+L E+ E G V+ G
Sbjct: 72 VERRITRNVLSFLNPTSHFNVDYWDQRLGDPVNAVTVLRAKLDAWLAEQCENAGVMVMPG 131
Query: 164 LFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK--SINAGD 221
+ + L FE V+ G K G E L V+ ADG NS +A+ I A +
Sbjct: 132 IRVDSLL---FENGQVV------GVKAGEDE---LHAHVVVAADGVNSFIAQQAGIRAKE 179
Query: 222 --YDYAIAFQERVKIPDE------KMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGT 273
+ A+ + + +P + + + +A VG D + G F + ++
Sbjct: 180 PAQNLAVGVKSVIGLPVKVIEDRFNVTGNDGVAYALVG-DCTKTAAGGGFLYTNKESISV 238
Query: 274 GTVTHKGDIKKFQLATRNRAKDKILG----------GKIIRVEAHPIPEHPRPRRLSGRV 323
G V D++ L T + D LG G+++ H E+ P S +
Sbjct: 239 GVVLRLDDLEAKGL-TSSEVHDNFLGHPAIAPLLRDGELLEYGCHLTIENG-PAMTSHDL 296
Query: 324 A-----LVGDAAGYV--TKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLE 376
A ++GDAAG+ T + G+ AA SG A+ I++ + G+ + D+ Y +
Sbjct: 297 ARPGFLIIGDAAGFTLNTGLTIRGMDLAAGSGIAAAKTIVKALKRGSY--GQQDMDDYRK 354
Query: 377 KWDKTY 382
+ D T+
Sbjct: 355 QLDATF 360
>gi|374724703|gb|EHR76783.1| putative geranylgeranyl reductase [uncultured marine group II
euryarchaeote]
Length = 404
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 121/296 (40%), Gaps = 27/296 (9%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDL 103
+ +R+ V ++G GP GG A LA G ++E + +P C G + + E L
Sbjct: 1 MLDRSWDVIIVGAGPTGGRTATHLASLGHSVLMLEEHSEIGRPFQCAGLVTPKAMHEVAL 60
Query: 104 PLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVING 163
++ +++ ++ P V +G K Y+ V R+ D + ++A + GA++
Sbjct: 61 YGSVL-QEIDGARIHGPDGTLVPVGTDGKLRTYV--VCRKQFDQGVVQQAMEAGATL--- 114
Query: 164 LFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAG-DY 222
P N V T D GE + +IG DGA+S + G
Sbjct: 115 --SLHSTPVN----AVATDTGVDVEVNINGEHVKMRTKLLIGCDGAHSWTRRHFKMGRPN 168
Query: 223 DYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPK--CDHVAVGTGTVTHKG 280
+ I FQ V+ + K E EMY G ++P F+ WV P H +G + +
Sbjct: 169 EMMIGFQTEVQGYEGK----ERWLEMYSGSAIAPGFFAWVIPSGFGSH-RIGVWSTPDRL 223
Query: 281 DIKKFQLATRNRAKDKILGGKIIRVE-----AHPIPEHPRPRRLSGRVALVGDAAG 331
K + + ++ + + PIP + +S RV L+GDAAG
Sbjct: 224 GGKSVEQCYEDLLNHEMWSDRFSEITETARYCGPIPSGMVKKTVSNRVMLLGDAAG 279
>gi|289425677|ref|ZP_06427449.1| geranylgeranyl reductase family protein [Propionibacterium acnes
SK187]
gi|289426986|ref|ZP_06428705.1| geranylgeranyl reductase family protein [Propionibacterium acnes
J165]
gi|295131461|ref|YP_003582124.1| geranylgeranyl reductase family protein [Propionibacterium acnes
SK137]
gi|335052052|ref|ZP_08544951.1| geranylgeranyl reductase family [Propionibacterium sp. 409-HC1]
gi|342212372|ref|ZP_08705097.1| geranylgeranyl reductase family [Propionibacterium sp. CC003-HC2]
gi|354605487|ref|ZP_09023463.1| hypothetical protein HMPREF1003_00030 [Propionibacterium sp.
5_U_42AFAA]
gi|386024872|ref|YP_005943177.1| putative electron transfer oxidoreductase [Propionibacterium acnes
266]
gi|407936315|ref|YP_006851957.1| electron transfer oxidoreductase [Propionibacterium acnes C1]
gi|417929883|ref|ZP_12573265.1| geranylgeranyl reductase family [Propionibacterium acnes SK182]
gi|289153978|gb|EFD02671.1| geranylgeranyl reductase family protein [Propionibacterium acnes
SK187]
gi|289159808|gb|EFD07993.1| geranylgeranyl reductase family protein [Propionibacterium acnes
J165]
gi|291376751|gb|ADE00606.1| geranylgeranyl reductase family protein [Propionibacterium acnes
SK137]
gi|332676330|gb|AEE73146.1| putative electron transfer oxidoreductase [Propionibacterium acnes
266]
gi|333765076|gb|EGL42446.1| geranylgeranyl reductase family [Propionibacterium sp. 409-HC1]
gi|340767916|gb|EGR90441.1| geranylgeranyl reductase family [Propionibacterium sp. CC003-HC2]
gi|340772872|gb|EGR95368.1| geranylgeranyl reductase family [Propionibacterium acnes SK182]
gi|353558496|gb|EHC27859.1| hypothetical protein HMPREF1003_00030 [Propionibacterium sp.
5_U_42AFAA]
gi|407904896|gb|AFU41726.1| putative electron transfer oxidoreductase [Propionibacterium acnes
C1]
gi|456739019|gb|EMF63586.1| electron transfer oxidoreductase [Propionibacterium acnes FZ1/2/0]
Length = 420
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 154/392 (39%), Gaps = 55/392 (14%)
Query: 64 AAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVGEFDLPLDIIDR---KVTKMKMI 118
A A LA+ G+ L+E+ K CG G P + L +D+ + K T+ I
Sbjct: 20 ATAAHLARRGLHVTLLEKVTFPRDKVCGDGLTPRAVKQLIRLGIDVSEEAGWKHTEGLRI 79
Query: 119 SPSNVA--VDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMKMDLPRNFE 175
+A V L + GMV RR VLD L AE G +++ G N
Sbjct: 80 HGGRIAPFVLPWPELADYPNFGMVCRRTVLDERLARHAESQGVTLVEGA--------NVT 131
Query: 176 QPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYD-----YAIAFQE 230
P + G + G + + V V+ ADG +SR+ ++ D A+
Sbjct: 132 DPILDPSGRICGVRTSDGTEYSAPV--VVAADGNSSRLGLAMGLHKRDDRPMGVAVRAYY 189
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDF---YGWVFPKCD-HVAVGTGTVTHKGDIKKFQ 286
R + D + + E+ E++ G D YGW FP+ D V +G G + +
Sbjct: 190 RSALSDSRNL--ESWLELWDGAPQKSDLLPGYGWAFPEGDGTVNIGLGMLDSSAAFGRTD 247
Query: 287 LATRNRAKDKILGGKI----------IRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKC 336
+ + L + IR A P+ + +P G + LVGDA G V
Sbjct: 248 YRSLMKRWLSHLPAEWTLDEEHREGPIRGAALPMAFNRQPHYRDG-LLLVGDAGGMVNPF 306
Query: 337 SGEGIYFAAKSGRMCAEAIIEGSENGTRM-IDEGDLRKYLEKWDKTYWPTYKVLDVLQKV 395
+GEGI +A ++G M A+AI E G R E L+ Y + + Y++ +
Sbjct: 307 NGEGIDYAMEAGEMAADAIAEAHYRGHRTPAAEKALQGYPRALQRHFGGYYRLGTI---- 362
Query: 396 FYRSNPAREAFVEMCADEYVQKMTFDSYLYKR 427
FV + D V KM L +R
Sbjct: 363 ----------FVRLIGDPRVMKMCTTYGLPRR 384
>gi|304314881|ref|YP_003850028.1| dehydrogenase [Methanothermobacter marburgensis str. Marburg]
gi|302588340|gb|ADL58715.1| predicted dehydrogenase [Methanothermobacter marburgensis str.
Marburg]
Length = 376
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 136/347 (39%), Gaps = 42/347 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDIIDR 110
V ++G GPAG A A G +++RK P C G I + LP ++I
Sbjct: 6 VIIMGAGPAGSTIARLTASMGFRVGVLDRKKILGVPLQCAGLISHRITEANVLPDNLILN 65
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
V + SPS + + + + +P ++ + R D YL + A + GA + G +
Sbjct: 66 SVRGAVLHSPSGIKLRVSRK-RPEAHV--IDRTAYDQYLADLACEAGAELRTGTAV---- 118
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
R+F + E +G RTL ++ A G D A Q
Sbjct: 119 -RDFSEAT--GEVEVNG--------RTLRASVLVDARG---------QVAIRDKYPARQF 158
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATR 290
V+ D++M + ++ V +SP F W P D G H ++K +
Sbjct: 159 LVRFRDQEM--DTDFVDLRVDSRLSPGFL-WRIP-LDEKTARVGAFGHHKNLKDL---IK 211
Query: 291 NRAKDKILGGKIIRVEAHPIPE-HPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
D +I+ IPE P + GR +GDAAG V +G GI A+++
Sbjct: 212 GFISDLSTDFRIMESHHGFIPEPDPDMELVGGRCIRIGDAAGQVKPTTGGGIVLASRAAH 271
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVF 396
+ AE I E+ D G L Y E K Y K +Q+ F
Sbjct: 272 VAAEVIQMALED-----DMGLLENYQEVCRKLYMAEMKNQMRVQRTF 313
>gi|15899534|ref|NP_344139.1| FixC-like protein [Sulfolobus solfataricus P2]
gi|284173474|ref|ZP_06387443.1| hypothetical protein Ssol98_02310 [Sulfolobus solfataricus 98/2]
gi|384433152|ref|YP_005642510.1| glucose-inhibited division protein A [Sulfolobus solfataricus 98/2]
gi|13816171|gb|AAK42929.1| FIXC protein homolog (fixC) [Sulfolobus solfataricus P2]
gi|261601306|gb|ACX90909.1| glucose-inhibited division protein A [Sulfolobus solfataricus 98/2]
Length = 395
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 147/339 (43%), Gaps = 54/339 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPLCMVGEFDLPLDI---- 107
+ V+G GPAG +AA T A+ G + L+ER + K GA + + +F DI
Sbjct: 5 IVVVGAGPAGSSAAITAARGGAKVLLLERGPEPGSKNVSGA--MIRLEDFSSVYDIASIP 62
Query: 108 IDRKVTKMKMI--SPSN---VAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVIN 162
I+RKV + +I S SN ++V++ L V R LD ++ ++AEK GA +I
Sbjct: 63 IERKVKNVDLILLSDSNRTRISVNVESNL------ATVARLKLDKWMAQQAEKAGALLIT 116
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKR-TLEVDAVIGADGANSRVAKSINAG- 220
+ E +G + + R + D V+ A+G N+ V+ N
Sbjct: 117 --------------KTTVLGVEREGNEYKISTDRGEITADRVVLAEGVNALVSMKANIRP 162
Query: 221 --DYDYAIAFQERVKIPDEKMVYY--------ENLAEMYVGDDVSPDFYGWVFPKCDHVA 270
D+A + V ++ + E ++ +G D P + G+++ D VA
Sbjct: 163 DLTPDHAAQTVKEVYSLNKDEINKRFGFKADDEGISWRILGTDPVP-YAGFLYVYKDAVA 221
Query: 271 VGTGT---VTHKGDIKKF----QLATRNRAKDKILGGKIIRVEAHPIPEH--PRPRRLSG 321
+G G + K I + ++ R + + G + A IPE+ P + SG
Sbjct: 222 IGAGIPMKILIKRKITPYTVLDEVKERLNFNELVKGASLREYSAKVIPEYGFPSWKACSG 281
Query: 322 RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
+V L GDA G V + GI A SG + +A +E E
Sbjct: 282 KVYLAGDAIGLVDPLTFNGIGPAVASGVVAGKAALESYE 320
>gi|82543935|ref|YP_407882.1| hypothetical protein SBO_1432 [Shigella boydii Sb227]
gi|416301117|ref|ZP_11652892.1| putative electron transfer flavoprotein-quinone oxidoreductase FixC
[Shigella flexneri CDC 796-83]
gi|417681856|ref|ZP_12331227.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Shigella boydii 3594-74]
gi|420325644|ref|ZP_14827407.1| FAD binding domain protein [Shigella flexneri CCH060]
gi|421682622|ref|ZP_16122432.1| flavoprotein (electron transport), possibly involved in anaerobic
carnitine metabolism [Shigella flexneri 1485-80]
gi|81245346|gb|ABB66054.1| YdiS [Shigella boydii Sb227]
gi|320184447|gb|EFW59255.1| putative electron transfer flavoprotein-quinone oxidoreductase FixC
[Shigella flexneri CDC 796-83]
gi|332096045|gb|EGJ01050.1| putative electron transfer flavoprotein-quinone oxidoreductase ydiS
[Shigella boydii 3594-74]
gi|391252987|gb|EIQ12176.1| FAD binding domain protein [Shigella flexneri CCH060]
gi|404340485|gb|EJZ66907.1| flavoprotein (electron transport), possibly involved in anaerobic
carnitine metabolism [Shigella flexneri 1485-80]
Length = 429
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 135/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G A AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGADVASSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G L+ + V+ ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILQANVVVLADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQMVNDGVMIVGDAAGF 306
>gi|422010064|ref|ZP_16357046.1| putative oxidoreductase FixC [Providencia rettgeri Dmel1]
gi|414092237|gb|EKT53916.1| putative oxidoreductase FixC [Providencia rettgeri Dmel1]
Length = 428
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 141/358 (39%), Gaps = 55/358 (15%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPLDI----ID 109
++G G AG AA LA+ G + LIER K G E +P I+
Sbjct: 10 IVGAGLAGSVAALVLAREGAQVLLIERGNYAGGKNVTGGRMYAHSLERIIPGFTQEAPIE 69
Query: 110 RKVTKMK---MISPSNVAVDI--GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
R +T+ K M V VD G P E V R LD +L E+AE GA I G+
Sbjct: 70 RMITREKLSFMTETGAVTVDFQNGSEQSPDETSWSVLRGKLDPWLVEQAENAGAQCITGI 129
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADGANSRVA------KSI 217
V E DG GV + LE VI ADG NS +A K +
Sbjct: 130 -------------RVDKLVERDGKVVGVEADGDVLEAKVVILADGVNSLLAEQLGMTKRV 176
Query: 218 NAGDYDYAIAFQERVKIPDEKMVYYENL------AEMYVGDDVSPDFYGWVFPKCDHVAV 271
NA A+ +E +++P + + NL A ++ G + G F + V
Sbjct: 177 NA--EHVAVGVKELIELPKDVLANRFNLKDKEGVAWLFAGSP-TDGLMGGGFLYTNEDTV 233
Query: 272 GTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPE---HPRPRRL 319
G V IK + + +D I GGK++ AH +PE + +
Sbjct: 234 SLGLVCGLHHIKDAKKSVPQMLEDFKQHPAVAPLIEGGKMVEYAAHVVPEAGLKMQSELV 293
Query: 320 SGRVALVGDAAGYVTKC--SGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYL 375
V + GDAAG + G+ A SG A+A++ S T + +L +YL
Sbjct: 294 RDGVLIAGDAAGMCMNLGFTIRGMDLAVASGEAAAKAVL--SAMKTDDFSKQNLNQYL 349
>gi|373456323|ref|ZP_09548090.1| geranylgeranyl reductase [Caldithrix abyssi DSM 13497]
gi|371717987|gb|EHO39758.1| geranylgeranyl reductase [Caldithrix abyssi DSM 13497]
Length = 414
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 161/375 (42%), Gaps = 74/375 (19%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPLDIIDRK 111
+A++G GPAG A+ LAK + +I++ + K CG + +VG + ++ +
Sbjct: 7 IAIVGAGPAGSTASLFLAKQNIAHVIIDKAEFPRDKICGDGLSGKVVGVLE---ELNPKW 63
Query: 112 VTKM-------------KMISPSNVAVD----IGQTLKPHEYIGMVRREV-LDAYLRERA 153
+ +M + ++P+ A+D I Q+L P G + + + D +L +
Sbjct: 64 IEEMQADEAHFLDSWGVRFVAPNGEAIDLPFRINQSL-PERAPGFISKRIHFDQFLFSKI 122
Query: 154 EKNGASVINGLFMKMDLPR--NFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANS 211
+ + A V F++ +L + Q +L+ T+ G+ T ++ A+G S
Sbjct: 123 DHSIAKV----FLRTELKKVEREGQALILHLTQN-------GKALTARTRLLVAAEGDRS 171
Query: 212 RVAKSINAG-----DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDF-------Y 259
VA+ + AG Y YA YYEN+A+++ + + F Y
Sbjct: 172 VVARQL-AGYRMQRPYYYA-----------GLRAYYENVADLHPQNFIELHFLEECLPGY 219
Query: 260 GWVFPKCDHVA-VGTGTVT-----HKGDIKKFQL-ATRNR--AKDKILGGKIIR-VEAHP 309
W+FP ++ A VG G ++ K +IKK L A N K++ ++I ++
Sbjct: 220 FWIFPLPNNQANVGVGILSSDIKKRKLNIKKIMLSAIENNPTIKERFKNARMIDPIKGWG 279
Query: 310 IPEHPRPRRLSG-RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI---IEGSENGTRM 365
+P LSG LVGDA + +GEGI A S R+ A I +E + R
Sbjct: 280 LPLGTVKHPLSGDNYLLVGDAGSLIDPFTGEGIGNAMFSARIAARLIPQFLEAGDFSARA 339
Query: 366 IDEGDLRKYLEKWDK 380
+ D Y W +
Sbjct: 340 LKRYDAEVYDRMWSE 354
>gi|354557491|ref|ZP_08976749.1| Electron-transferring-flavoprotein dehydrogenase
[Desulfitobacterium metallireducens DSM 15288]
gi|353550285|gb|EHC19722.1| Electron-transferring-flavoprotein dehydrogenase
[Desulfitobacterium metallireducens DSM 15288]
Length = 430
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 156/355 (43%), Gaps = 63/355 (17%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAI-----PLCMVGEF-- 101
N V V+GGGPAG +AA + AK G++T +IER K G + ++ EF
Sbjct: 3 NFDVIVVGGGPAGLSAAISAAKAGMKTVVIERGDYPGTKNVMGGVLYTEATAAVIPEFWK 62
Query: 102 DLPLD--IIDRK---VTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKN 156
D PL+ I++++ ++ ++++ + GQ +P+ ++R + D +L ++AEK
Sbjct: 63 DAPLERPIVEQRYGLLSGDEIVTAAYRNPAWGQ--EPYNAHSVLRVK-FDGWLAKQAEKA 119
Query: 157 GA-----SVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANS 211
G +V+ L K DL G + G E L VI A+GAN+
Sbjct: 120 GVMIIPETVVEDLLYKGDL--------------VVGVRTGRAEG-DLGAKVVILAEGANN 164
Query: 212 RVAKSINAGDY----DYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYG------- 260
+A+ A+A +E +K+P+EK+ E+ + G + + +G
Sbjct: 165 FIARKAGLAQELQPDKVAVAVKEIIKLPEEKI---EDRFCLEPGQGATIELFGGSTDGMM 221
Query: 261 ---WVFPKCDHVAVGTGTVTHKGDIKKF-------QLATRNRAKDKILGGKIIRVEAHPI 310
+++ D +++G G + ++ KK+ L + K + GG+ AH +
Sbjct: 222 GTAFIYTNQDSISIGVGVLLNQLIEKKWTPNDLLENLKAKPYVKRLLQGGETKEYLAHLL 281
Query: 311 PE---HPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENG 362
PE P+ V + GD A V EG A SGR+ + E ++G
Sbjct: 282 PEGGYKSIPKLYRQGVLVAGDTAMLVNGIHREGSNLAMTSGRVAGQVAAEAIKSG 336
>gi|425470052|ref|ZP_18848933.1| Geranylgeranyl reductase [Microcystis aeruginosa PCC 9701]
gi|389880064|emb|CCI39140.1| Geranylgeranyl reductase [Microcystis aeruginosa PCC 9701]
Length = 378
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 129/312 (41%), Gaps = 38/312 (12%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPLD-IIDRKV 112
+IG GPAG A LAK G ++++ KL KPCGG + + FD +I+ V
Sbjct: 6 IIGAGPAGTTAGYHLAKRGRSILILDKAKLPRYKPCGGGVSPAIKQWFDFDFTPVIENTV 65
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPR 172
T+++ A L E + MV+R+ D +L ++A GA++ D
Sbjct: 66 TQVEFTWKQGDAATT--KLNMLEPMWMVQRDRFDDFLGQQAIAVGATI-------QDNSE 116
Query: 173 NFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERV 232
+ ++ + + ++G T +I ADG ++ + + AI +
Sbjct: 117 VTQIKFIQDHWQVTTSQG------TFSGKYLIAADGVRGSTSRWLGLPAKNQAIGATLEI 170
Query: 233 -----KIPDEKMVY-YENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQ 286
IP +K + + +L Y+ W FPK + + KG IK +
Sbjct: 171 TNAEATIPPKKAFFDFGSLKNGYI----------WAFPKSNGYTI--SGACFKGSIKSEE 218
Query: 287 LATR--NRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALV-GDAAGYVTKCSGEGIYF 343
L + N A K + R + + + L + AL+ G+AAG + GEGI
Sbjct: 219 LKKQLLNYAHQKGWNLEDYRYSEYALALWNGNQPLHAQNALITGEAAGILDPLIGEGIRP 278
Query: 344 AAKSGRMCAEAI 355
A +G AEAI
Sbjct: 279 AILTGVKAAEAI 290
>gi|374299280|ref|YP_005050919.1| geranylgeranyl reductase [Desulfovibrio africanus str. Walvis Bay]
gi|332552216|gb|EGJ49260.1| geranylgeranyl reductase [Desulfovibrio africanus str. Walvis Bay]
Length = 387
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 129/313 (41%), Gaps = 56/313 (17%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAI------PLCMVGEFDLPLDI 107
VIG GPAG AA A++G++T L+++ + KPCGG + L VG LP +
Sbjct: 6 VIGAGPAGSMAARQAAQSGLKTLLLDKDQFPRAKPCGGGLTLRALDALASVG-LRLPESV 64
Query: 108 IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMK 167
I+R + + I+ + +V++ KP V RE D+ L A +
Sbjct: 65 IERPLMGAR-ITIAGRSVEV---RKPWPVAVTVLRERFDSLLLHAAAAA--------GAR 112
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVI--GADGANSRVAKSINAGDYDYA 225
++L R E + G + AVI GA G RV + IN +
Sbjct: 113 VELGRRVEA----VTQDRSSVAISAGRETWSGRLAVIAEGASGRLKRVVRPINGECFWIC 168
Query: 226 IAFQERV--KIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIK 283
++ + ++ D +++ E ++ Y W+FP+ + +VG
Sbjct: 169 VSTDSILNGQVDDHGLMHIET--------GLTRTGYAWIFPRRESASVGLSA-------- 212
Query: 284 KFQLATRNRAKDKILGGKI--------IRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVT 334
+ +ILGG + + + H +P RRL SGRV L GDA G+
Sbjct: 213 ---MPGHCHGPRRILGGYLGGHGFDADLPLRGHIVPLGGLKRRLASGRVLLAGDAGGFAD 269
Query: 335 KCSGEGIYFAAKS 347
+ EGI +A S
Sbjct: 270 AFTCEGIAYALLS 282
>gi|365974754|ref|YP_004956313.1| geranylgeranyl reductase [Propionibacterium acnes TypeIA2 P.acn33]
gi|365744753|gb|AEW79950.1| geranylgeranyl reductase family protein [Propionibacterium acnes
TypeIA2 P.acn33]
Length = 420
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 153/392 (39%), Gaps = 55/392 (14%)
Query: 64 AAAETLAKNGVETFLIER-KLDNCKPCG-GAIPLCMVGEFDLPLDIIDR---KVTKMKMI 118
A A LA+ G+ L+E+ K CG G P + L +D+ + K T+ I
Sbjct: 20 ATAAHLARRGLHVTLLEKVTFPRDKVCGDGLTPRAVKQLIRLGIDVSEEAGWKHTEGLRI 79
Query: 119 SPSNVA--VDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMKMDLPRNFE 175
+A V L + GMV RR VLD L AE G +++ G N
Sbjct: 80 HGGRIAPFVLPWPELADYPNFGMVCRRTVLDERLARHAESQGVTLVEGA--------NVT 131
Query: 176 QPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYD-----YAIAFQE 230
P + G + G + + V V+ ADG +SR+ ++ D A+
Sbjct: 132 DPILDPSGRICGVRTSDGTEYSAPV--VVAADGNSSRLGLAMGLHKRDDRPMGVAVRAYY 189
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDF---YGWVFPKCD-HVAVGTGTVTHKGDIKKFQ 286
R + D + + E+ E++ G D YGW FP+ D V +G G + +
Sbjct: 190 RSALSDSRNL--ESWLELWDGAPQKSDLLPGYGWAFPEGDGTVNIGLGMLDSSAAFGRTD 247
Query: 287 LATRNRAKDKILGGKI----------IRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKC 336
+ + L + IR A P+ + +P G + LVGDA G V
Sbjct: 248 YRSLMKRWLSHLPAEWTLDEEHREGPIRGAALPMAFNRQPHYRDG-LLLVGDAGGMVNPF 306
Query: 337 SGEGIYFAAKSGRMCAEAIIEGSENGTRM-IDEGDLRKYLEKWDKTYWPTYKVLDVLQKV 395
+GEGI +A + G M A+AI E G R E L+ Y + + Y++ +
Sbjct: 307 NGEGIDYAMEGGEMAADAIAEAHYRGHRTPAAEKALQGYPRALQRHFGGYYRLGTI---- 362
Query: 396 FYRSNPAREAFVEMCADEYVQKMTFDSYLYKR 427
FV + D V KM L +R
Sbjct: 363 ----------FVRLIGDPRVMKMCTTYGLPRR 384
>gi|218437505|ref|YP_002375834.1| geranylgeranyl reductase [Cyanothece sp. PCC 7424]
gi|218170233|gb|ACK68966.1| geranylgeranyl reductase [Cyanothece sp. PCC 7424]
Length = 376
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 136/348 (39%), Gaps = 31/348 (8%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPLD-IIDRKV 112
V+G GPAG A+ LAK G L+++ L KPCGG + + FD +I+ V
Sbjct: 6 VVGSGPAGATASYFLAKKGHSVLLLDKVSLPRYKPCGGGVSPVIAQWFDFDFTPVIETTV 65
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPR 172
+++ V + +LK E + MV+R+ D L + A+K GA L
Sbjct: 66 NRVEFTWKLGDPVQV--SLKDIEPMWMVKRDKFDYLLVQEAQKAGAQ----------LQD 113
Query: 173 NFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERV 232
N E + + D T +I ADG ++A+ + + I V
Sbjct: 114 NTEVTAIAF---KDNQWQVTTTNGTFNGTYLIAADGVKGKLAQWLGFKPREEFIGATLEV 170
Query: 233 KIPDEK-MVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRN 291
EK Y + + G Y W FPK D + G K ++ + N
Sbjct: 171 PCSVEKPHQAYFDFGSLKNG-------YIWNFPKSDGYTISGGCFKGKNQPQEIKQQLTN 223
Query: 292 RAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALV-GDAAGYVTKCSGEGIYFAAKSGRM 350
AK+ L + + + + L AL+ G++AG GEGI + +G
Sbjct: 224 YAKELGLDLSQSQYSEYALSLWADHQPLHTNHALLAGESAGICDPLLGEGIRPSILTGLR 283
Query: 351 CAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398
AEAI + N D+ L Y + K + + L +FY+
Sbjct: 284 AAEAIDQALGN-----DDQALANYSQIIQKEWGADMVLASRLAGIFYQ 326
>gi|170289685|ref|YP_001736501.1| dehydrogenase [Candidatus Korarchaeum cryptofilum OPF8]
gi|170173765|gb|ACB06818.1| Dehydrogenase (flavoprotein) [Candidatus Korarchaeum cryptofilum
OPF8]
Length = 383
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 145/332 (43%), Gaps = 74/332 (22%)
Query: 54 AVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIP----LCMVG-------EFD 102
A+IG GPAG AA+ L++ G + +IER CG +P L + G EF
Sbjct: 6 AIIGAGPAGSAASFFLSQRGYKVIVIERSRKASSICGEYVPDPSSLGIEGEVGSSYSEFF 65
Query: 103 LPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVIN 162
P + + + K+ S +G ++K R E+++ L ERA+ GA V
Sbjct: 66 KPFVVNELRRISFKIFGRSFKVDYLGYSIK--------RSEMVEDRL-ERAQDLGADVRL 116
Query: 163 G-LFMKMDLPRNFEQPYVL------YYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
G F+ ++ E+ Y + Y+ Y VIGADG SR+++
Sbjct: 117 GESFITLER----EEVYKILTSKGEYFARY-----------------VIGADGFLSRISR 155
Query: 216 SINAGDYDY---AIAFQERVKIPDEKMVYYENLAEMYV--GDDVSPDFYGWVFPKCDHVA 270
+N D +IAF P E + E+ +EM + ++V+P Y W+ P+ D A
Sbjct: 156 FLNGEKVDLDDVSIAF------PIEAELKVEDPSEMKLIFDEEVAPGAYAWIIPRGDSRA 209
Query: 271 -VGTGTVTHKGDIKKFQLATRN-----RAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRV 323
VG G + + T N R ILG + + +P +R++ +
Sbjct: 210 NVGLGI--------RCSMITMNPLDYMRKFLSILGIEARDLRGRFVPVGGLVKRVAEDGI 261
Query: 324 ALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
L+GDAAG V +G GI+ A S + ++++
Sbjct: 262 FLLGDAAGMVIPSNGGGIHNAIISAYLLSKSL 293
>gi|110637497|ref|YP_677704.1| electron transfer flavoprotein [Cytophaga hutchinsonii ATCC 33406]
gi|110280178|gb|ABG58364.1| probable electron transfer flavoprotein [Cytophaga hutchinsonii
ATCC 33406]
Length = 384
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 162/381 (42%), Gaps = 62/381 (16%)
Query: 47 TNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL-DNCKPCGGAIPLC---MVGEFD 102
+N + V ++G GPAG AA L K+ + L+E++L K CG A+ ++ + D
Sbjct: 5 SNTSFDVIILGAGPAGSTAALALQKSNLTVALLEKELFPRDKICGDALSCVAERVLKQID 64
Query: 103 LPLD----IIDRK--VTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKN 156
L+ + K V K ++ SP ++ + + + H ++R D +L E+A
Sbjct: 65 PSLEQELLLYSEKTVVNKARVYSPEFRSIVLNFSKRGH----CIKRLDFDNWLFEKANAK 120
Query: 157 GASVINGLFMKMDLPRNFEQPYVL-YYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
V F+Q V + G + + + L VI DGA+S A+
Sbjct: 121 NIEV-------------FQQAKVTDVRIDNSGAEVVLQDGTILHAAIVICCDGAHSVAAR 167
Query: 216 SINAGDYD---YAIAFQERVKIPDEKMVYYENLA-------EMYVGDDVSPDFYGWVFP- 264
+ D Y A ++ YY N++ E++ D P ++ W+FP
Sbjct: 168 QLTHLKLDRKHYVGAVRQ----------YYRNISDTAGNELEIFFLKDFLPGYF-WIFPL 216
Query: 265 KCDHVAVGTGTVT-----HKGDIKKFQ---LATRNRAKDKILGGKIIR-VEAHPIPEHPR 315
K VG G ++ +K D+KK + + + K++ + + V+ +P R
Sbjct: 217 KNGEANVGFGALSAIISKNKIDLKKSLQEIIQSVPQLKERFKDAEAMETVKGFGLPLGSR 276
Query: 316 PRRLSG-RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKY 374
+SG L GDAA + +GEGI A +SG+ AE I E+ ++ Y
Sbjct: 277 KLPISGAHFMLCGDAASLIDPVTGEGIETAMESGKYAAEQAIRCFESTD--FSAACMQAY 334
Query: 375 LEKWDKTYWPTYKVLDVLQKV 395
++ K + ++ VLQ++
Sbjct: 335 DQRIHKKMFKRFRQHYVLQRL 355
>gi|150402398|ref|YP_001329692.1| geranylgeranyl reductase [Methanococcus maripaludis C7]
gi|150033428|gb|ABR65541.1| geranylgeranyl reductase [Methanococcus maripaludis C7]
Length = 385
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 131/317 (41%), Gaps = 24/317 (7%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V ++GGGP+G E + V +++ C G + + E P +++
Sbjct: 8 VVIVGGGPSGFITGENIKNRKVLVLEEHQEIGVPLQCAGLLSKNCIKELGNPKGSVNK-- 65
Query: 113 TKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVIN--GLFMKMDL 170
+ I N ++ +G E + R+V+D + RA KN ++ G +L
Sbjct: 66 VRGAHIYSKNSSITVGNEEIRAE---VFERKVMDKDIAVRASKNVDVLLKSYGKIKNSNL 122
Query: 171 PRNFEQP-YVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQ 229
P + + + L D E + + +IGADG S + +S+N D I
Sbjct: 123 PSDRDNNRHKLQIMHMD-------EIFEVSPEIIIGADGIRSTIGRSLNMLDKKREIISG 175
Query: 230 ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFP-KCDHVAVGTGTVTHKGDIKKFQLA 288
+++ + K+ ++ + S F+ W+ P D V VG T+ K
Sbjct: 176 VQIEFVNAKI--DDDFVYVIYDKRYSEKFFTWLIPLGNDRVRVGMCDSTNSYK-KLLDFI 232
Query: 289 TRNRAKDKILGGKI-IRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKS 347
N+ +IL + IP + + V LVGD+AG V SG G+Y+ AK
Sbjct: 233 ENNQIAKEILKNATPVEFICGAIP-IGYSKTVKNNVMLVGDSAGQVKPLSGGGLYYGAKC 291
Query: 348 GRMCAEAI---IEGSEN 361
G++CA+ I EG+ N
Sbjct: 292 GKICADTINHYFEGNYN 308
>gi|443314551|ref|ZP_21044101.1| geranylgeranyl reductase family protein [Leptolyngbya sp. PCC 6406]
gi|442785848|gb|ELR95638.1| geranylgeranyl reductase family protein [Leptolyngbya sp. PCC 6406]
Length = 376
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 144/371 (38%), Gaps = 76/371 (20%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERK-LDNCKPCGGAIPLCMVGEFDLPLDIIDRKVT 113
++G GPAG A LAK G L+E+ L KPC GA+ + FD L ++T
Sbjct: 6 IVGAGPAGSTVAYHLAKQGHTVLLLEQAVLPRYKPCSGALSPSVAQWFDFDL-APGLELT 64
Query: 114 KMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----INGLFMKM 168
K+ + ++ LK E I +VRR+V D +L +A+ GA V + G+ ++
Sbjct: 65 TRKLRYTWKLEDEVCAELKTQEPIWLVRRDVFDQFLVTQAQGAGAEVRDQTPVTGIALQG 124
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAF 228
D Q +V TLE ++GADGA +AK +
Sbjct: 125 D----HWQVHV--------------PGETLECQYLVGADGATGPMAKWLG---------- 156
Query: 229 QERVKIPDEKM---VYYENLAEMYVGDDVSPDF-YG-------WVFPKCDHVAVGTGTVT 277
P++K+ E A+ V D + +F +G W FP+ G
Sbjct: 157 -----FPEQKLRTAAILEVDADGPVVDSFALNFEFGLAKNACIWGFPRQQGYTFGIVNFL 211
Query: 278 HKGDIKKFQLATRNRAK----DKILGGK---IIRVEAHPIPEHPRPRRLSGRVALVGDAA 330
G IK R+ A+ D G + ++++ P H R LVG+A
Sbjct: 212 -GGKIKDLHAPLRDYAQGLGIDPAQGQEYTHLVKLWDGHQPLH------CDRALLVGEAG 264
Query: 331 GYVTKCSGEGIYFAAKSGRMCAEAI---IEGSENGTRMIDEGDLRKYLEKWDKTYWPTYK 387
V + EGI SG A AI + G N L +Y E + + +
Sbjct: 265 AIVDPLTAEGIRPGVFSGVKAAAAIHQALGGEANA--------LAQYTEIIQQEWGNDMQ 316
Query: 388 VLDVLQKVFYR 398
+ VFYR
Sbjct: 317 WAQRIASVFYR 327
>gi|404447070|ref|ZP_11012156.1| geranylgeranyl reductase [Mycobacterium vaccae ATCC 25954]
gi|403649437|gb|EJZ04814.1| geranylgeranyl reductase [Mycobacterium vaccae ATCC 25954]
Length = 393
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 147/371 (39%), Gaps = 48/371 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLPLDIID-- 109
+ + GGGP+G AAA A+ G + + ++ + KPCG + V + + + D
Sbjct: 7 LVIAGGGPSGSAAAWQAAQTGAKVLVCDKAQFPRAKPCGDGLTARAV-SYLQKMGLADEV 65
Query: 110 ---RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFM 166
+V ++ + SPS + + ++ V RE LD L + AE GA + G
Sbjct: 66 ATYHRVNRVTVFSPSRWELSFPKRPGMPDHGHTVSREHLDTVLLKHAESVGAEIRQGA-- 123
Query: 167 KMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINA-GDYDYA 225
P + G GEK + DAVI ADGA S + +++ +Y+
Sbjct: 124 ------EVSGPELDANGRVIGVVLKGGEK--VYADAVIAADGAYSPIKRALKIDSEYNGY 175
Query: 226 IAFQERVKIP------DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHV-AVGTGTVTH 278
A R ++P D +Y L ++ GD + YGWVFP D + +G G V
Sbjct: 176 SAIAIRSEMPANRPDSDSLDIY---LKLLFQGDQLPG--YGWVFPMGDGIFNIGLGYVNS 230
Query: 279 KGDIKKFQ--------LATRNRAK-----DKILGGKIIRVEAHPIPEHPRPRRLSGRVAL 325
+ + L T R +++ K +R P+ P G V
Sbjct: 231 YKNWQSINATQFLGDFLRTLPREWELPPIEELKKNKSVRAWRLPMGFTAWPPWRPG-VLF 289
Query: 326 VGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPT 385
GD+ G SG GI A +SG E I NG D Y ++ + +
Sbjct: 290 TGDSLGAGKPASGAGISKALESGLAAGECAIAALTNG----GPDDFTNYAQRMEAAWGRE 345
Query: 386 YKVLDVLQKVF 396
Y+ ++ K+
Sbjct: 346 YRRGRIMHKLI 356
>gi|307353892|ref|YP_003894943.1| geranylgeranyl reductase [Methanoplanus petrolearius DSM 11571]
gi|307157125|gb|ADN36505.1| geranylgeranyl reductase [Methanoplanus petrolearius DSM 11571]
Length = 399
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 157/368 (42%), Gaps = 34/368 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLD--II 108
V VIGGGP G AA+T ++G+ +IE++ P C I ++ EF +D I
Sbjct: 7 VLVIGGGPGGALAAKTAVESGLTACIIEKRPAIGAPVRCAEGIGEDLISEFFDEVDPKWI 66
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-INGLFMK 167
K+ + K+I+P + + + +E ++ R+ D L +A GA + +
Sbjct: 67 SAKIERAKIIAPDGSSFYLDPAMAGNEVGYVLDRKFFDRDLVWQAVDAGAECYVRARAVD 126
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIA 227
+ + + V+ Y GE+ + VI ADG S+ ++ D +
Sbjct: 127 AIVEDGYVKGAVIEYG---------GERYEVRAKVVIAADGVESKFSRYCG---IDTTVP 174
Query: 228 FQERVKIPDEKMVYYE---NLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTG-TVTHKGDI 282
+E M + + YVG DV+P+ Y W+FPK + A VG G + T D
Sbjct: 175 LRELETCAQYLMTNIDIEPGVTVFYVGRDVAPEGYIWIFPKGERSANVGIGISGTQSKDG 234
Query: 283 KKFQLATRNRAKDKILGGKIIRVEAHPIPE-HPRPRRLSGRVALVGDAAGYVTKCSGEGI 341
K+ + K+ GK+I + + P ++ + +VGDAA +G GI
Sbjct: 235 KRAKDYLDKYVKENFPEGKVIELIIGGVSVCEPLECTVANGLIVVGDAARLSDPITGGGI 294
Query: 342 YFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNP 401
Y A SG++ AE E N D L KY E W ++ L K R+
Sbjct: 295 YNAMYSGKLAAEVAAECIANNDWSRDA--LMKYDETWRESR---------LGKALQRNYQ 343
Query: 402 AREAFVEM 409
+E FV++
Sbjct: 344 IKEIFVKL 351
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.137 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,465,039,703
Number of Sequences: 23463169
Number of extensions: 336001271
Number of successful extensions: 984594
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1178
Number of HSP's successfully gapped in prelim test: 3528
Number of HSP's that attempted gapping in prelim test: 976902
Number of HSP's gapped (non-prelim): 6660
length of query: 462
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 316
effective length of database: 8,933,572,693
effective search space: 2823008970988
effective search space used: 2823008970988
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)