BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012488
(462 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CA67|CHLP_ARATH Geranylgeranyl diphosphate reductase, chloroplastic OS=Arabidopsis
thaliana GN=CHLP PE=1 SV=1
Length = 467
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/467 (83%), Positives = 430/467 (92%), Gaps = 8/467 (1%)
Query: 2 ASMALKSFTGLRQSPQEQQHPHFIAQ-----ALP-RQQKFRVSAAKTSPKLTNRNLRVAV 55
++ LKSFTGLRQS EQ + F++ +LP R+ RV+AA+ +PKL+NR LRVAV
Sbjct: 3 TTVTLKSFTGLRQSSTEQTN--FVSHVPSSLSLPQRRTSLRVTAARATPKLSNRKLRVAV 60
Query: 56 IGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKM 115
IGGGPAGGAAAETLA+ G+ET LIERK+DNCKPCGGAIPLCMVGEF+LPLDIIDR+VTKM
Sbjct: 61 IGGGPAGGAAAETLAQGGIETILIERKMDNCKPCGGAIPLCMVGEFNLPLDIIDRRVTKM 120
Query: 116 KMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFE 175
KMISPSN+AVDIG+TLK HEYIGMVRREVLDAYLRERAEK+GA+VINGLF+KMD P N++
Sbjct: 121 KMISPSNIAVDIGRTLKEHEYIGMVRREVLDAYLRERAEKSGATVINGLFLKMDHPENWD 180
Query: 176 QPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIP 235
PY L+YTEYDG G G K+T+EVDAVIGADGANSRVAKSI+AGDYDYAIAFQER++IP
Sbjct: 181 SPYTLHYTEYDGKTGATGTKKTMEVDAVIGADGANSRVAKSIDAGDYDYAIAFQERIRIP 240
Query: 236 DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKD 295
DEKM YYE+LAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKD
Sbjct: 241 DEKMTYYEDLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKD 300
Query: 296 KILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
KILGGKIIRVEAHPIPEHPRPRRLS RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI
Sbjct: 301 KILGGKIIRVEAHPIPEHPRPRRLSKRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 360
Query: 356 IEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYV 415
+EGS+NG +MIDEGDLRKYLEKWDKTY PTY+VLDVLQKVFYRSNPAREAFVEMC DEYV
Sbjct: 361 VEGSQNGKKMIDEGDLRKYLEKWDKTYLPTYRVLDVLQKVFYRSNPAREAFVEMCNDEYV 420
Query: 416 QKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
QKMTFDSYLYKRV PG+PLED+KLAVNTIGSLVRANALRRE++KL++
Sbjct: 421 QKMTFDSYLYKRVAPGSPLEDIKLAVNTIGSLVRANALRREIEKLSV 467
>sp|Q9ZS34|CHLP_TOBAC Geranylgeranyl diphosphate reductase, chloroplastic OS=Nicotiana
tabacum GN=CHLP PE=2 SV=1
Length = 464
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/465 (83%), Positives = 423/465 (90%), Gaps = 4/465 (0%)
Query: 1 MASMALKSFTGLRQSPQEQQHPHFIAQALPRQQ---KFRVSAAKTSPKLTNRNLRVAVIG 57
MAS+ALK+FTGLRQS E ++++LP Q + R++A+K+SP++ RNLRVAV+G
Sbjct: 1 MASIALKTFTGLRQSSPENNSIT-LSKSLPFTQTHRRLRINASKSSPRVNGRNLRVAVVG 59
Query: 58 GGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKM 117
GGPAGGAAAETLAK G+ETFLIERK+DNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKM
Sbjct: 60 GGPAGGAAAETLAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKM 119
Query: 118 ISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQP 177
ISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF+KMD+P+ P
Sbjct: 120 ISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKAPNAP 179
Query: 178 YVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
YVL+YT YD G GEKRTLEVDAVIGADGANSRVAKSINAGDY+YAIAFQER+KI D+
Sbjct: 180 YVLHYTAYDSKTNGAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIKISDD 239
Query: 238 KMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKI 297
KM YYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHK DIKKFQLATR RA KI
Sbjct: 240 KMKYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKADIKKFQLATRLRADSKI 299
Query: 298 LGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIE 357
GGKIIRVEAHPIPEHPRPRRL RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+E
Sbjct: 300 TGGKIIRVEAHPIPEHPRPRRLQDRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVE 359
Query: 358 GSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQK 417
GSE G RM+DE DLRKYLEKWDKTYWPTYKVLD+LQKVFYRSNPAREAFVEMCADEYVQK
Sbjct: 360 GSEMGKRMVDESDLRKYLEKWDKTYWPTYKVLDILQKVFYRSNPAREAFVEMCADEYVQK 419
Query: 418 MTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 462
MTFDSYLYK+V PGNP+EDLKLAVNTIGSLVRANALRREMDKL++
Sbjct: 420 MTFDSYLYKKVAPGNPIEDLKLAVNTIGSLVRANALRREMDKLSV 464
>sp|Q6Z2T6|CHLP_ORYSJ Geranylgeranyl diphosphate reductase, chloroplastic OS=Oryza sativa
subsp. japonica GN=CHLP PE=2 SV=1
Length = 463
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/434 (79%), Positives = 381/434 (87%), Gaps = 2/434 (0%)
Query: 31 RQQKFRVSAAKTSPKL-TNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPC 89
R + AA +SPKL + R LRVAV+GGGPAGGAAAE LAK GVET LIERKLDNCKPC
Sbjct: 30 RMARLVTRAAASSPKLPSGRRLRVAVVGGGPAGGAAAEALAKGGVETVLIERKLDNCKPC 89
Query: 90 GGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYL 149
GGAIPLCMV EFDLPLD++DRKV KMKMISPSNVAVDIG TL PHEYIGMVRREVLDAYL
Sbjct: 90 GGAIPLCMVSEFDLPLDLVDRKVRKMKMISPSNVAVDIGGTLAPHEYIGMVRREVLDAYL 149
Query: 150 RERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVG-EKRTLEVDAVIGADG 208
R RAE GA V+NGLF++ + P+ YV++Y YD + G G EKRT EVDA++GADG
Sbjct: 150 RSRAEGAGAEVVNGLFLRYEAPKEPNGSYVVHYNHYDSSNGKAGGEKRTFEVDAIVGADG 209
Query: 209 ANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDH 268
ANSRVAK + AGDY+YAIAFQERVKIPD+KM YYE AEMYVGDDVSPDFYGWVFPKCDH
Sbjct: 210 ANSRVAKDMGAGDYEYAIAFQERVKIPDDKMKYYEERAEMYVGDDVSPDFYGWVFPKCDH 269
Query: 269 VAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGD 328
VAVGTGTVTHK DIKKFQ ATR RAKD+I GGKIIRVEAHPIPEHPRP+R++GRV LVGD
Sbjct: 270 VAVGTGTVTHKPDIKKFQAATRLRAKDRIEGGKIIRVEAHPIPEHPRPKRVAGRVTLVGD 329
Query: 329 AAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKV 388
AAGYVTKCSGEGIYFAAKSGRMCAEAI+ GS NGTRM++E DLR+YL ++D+ YWPTYKV
Sbjct: 330 AAGYVTKCSGEGIYFAAKSGRMCAEAIVAGSANGTRMVEESDLRRYLAEFDRLYWPTYKV 389
Query: 389 LDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 448
LDVLQKVFYRSN AREAFVEMCAD+YVQ+MTFDSYLYKRVVPGNPL+D+KLAVNTIGSLV
Sbjct: 390 LDVLQKVFYRSNAAREAFVEMCADDYVQRMTFDSYLYKRVVPGNPLDDIKLAVNTIGSLV 449
Query: 449 RANALRREMDKLTI 462
RA ALRREM+K+T+
Sbjct: 450 RATALRREMEKVTL 463
>sp|Q55087|CHLP_SYNY3 Geranylgeranyl diphosphate reductase OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=chlP PE=3 SV=1
Length = 407
Score = 573 bits (1476), Expect = e-162, Method: Compositional matrix adjust.
Identities = 275/404 (68%), Positives = 323/404 (79%), Gaps = 2/404 (0%)
Query: 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDR 110
LRVAV+GGGPAG +AAE L K G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR
Sbjct: 3 LRVAVVGGGPAGSSAAEILVKAGIETYLFERKLDNAKPCGGAIPLCMVDEFDLPPEIIDR 62
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDL 170
+V KMKMISPSN+ V+IGQTLK EYIGM RREVLD +LRERAEK G VING K+D+
Sbjct: 63 RVRKMKMISPSNIEVNIGQTLKDDEYIGMCRREVLDGFLRERAEKLGTKVINGTVYKLDI 122
Query: 171 PRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQE 230
P PY L+Y ++ G GE + L+VD VIGADGANSR+AK+I+AGDY+YAIAFQE
Sbjct: 123 PSKDSDPYTLHYADH-SVGGTTGEMKILKVDVVIGADGANSRIAKAIDAGDYNYAIAFQE 181
Query: 231 RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLAT 289
R+++P++KM YY+ LAEMYVGDDVSPDFY WVFPK DHVAVGTGT+ +K IK Q
Sbjct: 182 RIRLPEDKMAYYDELAEMYVGDDVSPDFYAWVFPKYDHVAVGTGTMKVNKARIKDLQAGI 241
Query: 290 RNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
R RA K+ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS R
Sbjct: 242 RTRAAKKLEGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSAR 301
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
MCAE I+ S NG R+ E DL++Y+++WDK Y TY VLD+LQ+VFYR++ REAFVEM
Sbjct: 302 MCAETIVATSNNGQRVPTEADLKQYIKQWDKRYGATYLVLDILQRVFYRTDATREAFVEM 361
Query: 410 CADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 453
C+D VQK+TFDSYLYK VVP NPL +K+ TIGSL+R NAL
Sbjct: 362 CSDIDVQKLTFDSYLYKTVVPANPLVQMKITAKTIGSLLRGNAL 405
>sp|P26172|BCHP_RHOCB Geranylgeranyl diphosphate reductase OS=Rhodobacter capsulatus
(strain ATCC BAA-309 / NBRC 16581 / SB1003) GN=bchP PE=3
SV=1
Length = 391
Score = 224 bits (571), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 145/396 (36%), Positives = 212/396 (53%), Gaps = 23/396 (5%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTK 114
V+GGGPAG AA +A+ G++ L++R KPCGGAIP ++ +FD+P ++ K+T
Sbjct: 7 VVGGGPAGSTAAWDMARAGLKVALLDRA-GRIKPCGGAIPPRLIRDFDIPDHLLVAKITS 65
Query: 115 MKMISPSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPR 172
+MISP+ VDI P E ++GMV RE D +LRERA K GA + G +++++ R
Sbjct: 66 ARMISPTGRFVDI-----PIENGFVGMVDREDYDEWLRERAGKAGAERLTGTWLRIE--R 118
Query: 173 NFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERV 232
+ + V++ + GE+ E VIGADGANS+V + A A+ E +
Sbjct: 119 DSGKTVVVWRDKV------TGEEMKAETRVVIGADGANSQVRNEVPATKIPLVFAYHEII 172
Query: 233 KIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNR 292
K P Y ++Y +SPDFYGWVFP ++G G T D+ T R
Sbjct: 173 KAPTTVANYDPTRCDVYYDGRISPDFYGWVFPHGKTASIGMG--TELPDVSLKDCTTLLR 230
Query: 293 AKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMC 351
+ + IR E PIP P +G+ V L GDAAG V SGEGIY+A GR
Sbjct: 231 QMSGLDKEETIRKEGAPIPLQPLDVWDNGKDVVLSGDAAGVVAPSSGEGIYYAHAGGRYA 290
Query: 352 AEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCA 411
AEA + ++G DL+ + K + +KVL ++Q +Y S+ RE FV +C
Sbjct: 291 AEAAMAFLKSGK----PADLKLARAGFMKEHGTVFKVLRMMQDKYYHSDDRRERFVSLCH 346
Query: 412 DEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSL 447
D VQ+MTF+SY+ K++ PL++LK+ + L
Sbjct: 347 DVDVQRMTFESYMNKKMTKFQPLKNLKIGFKNLAHL 382
>sp|P96800|Y1602_METBF Uncharacterized protein Mbar_A1602 OS=Methanosarcina barkeri
(strain Fusaro / DSM 804) GN=Mbar_A1602 PE=3 SV=2
Length = 387
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 144/322 (44%), Gaps = 28/322 (8%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
++ + V +IG GPAG AA LAK+ + +I++ KPC G + FD P
Sbjct: 2 ISMKKYDVVIIGAGPAGSYAAYMLAKSKINVLVIDKYSFPRYKPCAGGLTAKAFNSFDFP 61
Query: 105 LDIIDRKVTKMKMISPSNVAVDIGQTLKPHE-YIGMVRREVLDAYLRERAEKNGASVING 163
+ + T + S N I + ++ + M+ R+ D +L ++A +GA+ ++G
Sbjct: 62 ISKEVKYSTNSIVTSYKN---QIFHNISGNKTLVKMIERKEFDDFLIKKAVDSGATFLDG 118
Query: 164 LFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYD 223
+ + N E + + +IGADG N V ++ N + D
Sbjct: 119 MKVTEITWENAEFSIKT-------------DSEFFRCNYLIGADGTNGIVNRTFNIVERD 165
Query: 224 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVS--PDFYGWVFPKCDHVAVGTGTVTHKGD 281
F + P + +N+ + + D P+ Y W+FPK ++V VG T K
Sbjct: 166 -LYGFAVEINCPVSR----DNIGKFNMTFDFGTVPNGYLWIFPKDEYVCVGAYTTNRK-- 218
Query: 282 IKKFQLATRNRAKDKILGGKIIRVEAHPIPEHP-RPRRLSGRVALVGDAAGYVTKCSGEG 340
+K Q + + L + +++ H IP + ++ LVGDAAG+ +GEG
Sbjct: 219 MKNIQKYLLDYIEKLGLVPESEKLKGHIIPYYGINYKQPDFPCVLVGDAAGFGEYWTGEG 278
Query: 341 IYFAAKSGRMCAEAIIEGSENG 362
IY+A KSG + AE I ++G
Sbjct: 279 IYYAVKSGTIAAEVISSSIKSG 300
>sp|Q5JE27|GGR_PYRKO Digeranylgeranylglycerophospholipid reductase OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=TK1088 PE=3 SV=1
Length = 395
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 175/390 (44%), Gaps = 47/390 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLD--II 108
V V+G G AG A +AK G LI++K + K C AI + + ++D+P D I
Sbjct: 7 VVVVGSGIAGPIVARNVAKAGFSVLLIDKKWAIGTPKQCAEAISIKVFDKYDIPYDKRFI 66
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMK 167
+R++ K+ SPS ++ ++ E G++ R+V D L A K GA V+
Sbjct: 67 NREIYGAKLYSPSGYELE----MRYKEVSGVILERKVFDKMLAYYAAKAGADVL-ARTEA 121
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLE-----VDAVIGADGANSRVAKSINAGDY 222
+D+ R DG G+ K E D ++ ADG S +A+ AG
Sbjct: 122 LDVIRK------------DGKIVGIKAKHEDEPVEIYADIIVAADGVESTIAR--KAGIN 167
Query: 223 DYAIAFQERVKIPDEKMV--YYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVGTGTVTHK 279
YA + E ++ + +L ++ G++V+P Y WVFPK D VG G +
Sbjct: 168 TYAPPHEFDSGYEYEMLIEGFDPDLIHLWFGNEVAPRGYVWVFPKDEDRANVGIGINSDN 227
Query: 280 GDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKCSG 338
K+ L + ++ I K++ + IP + L+ V +VGDAA V G
Sbjct: 228 PKTAKYYL-DKWLEENNIPAKKLLEINVGLIPVGGFVKELAKDNVVVVGDAARQVNPMHG 286
Query: 339 EGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPT-----YKVLDVLQ 393
G+ A ++G + ++ I+ + ++E +L L+ + K +W T KVL V +
Sbjct: 287 GGMAEAMEAGTIASKWIV-------KALEEENL-SLLQNYTKEWWETDGKRLEKVLKVRR 338
Query: 394 KVFYRSNPAREAFVEMCADEYVQKMTFDSY 423
++ + F+++ + +K+ Y
Sbjct: 339 VTEKLTDEDLDLFIQILSGADAEKIASGDY 368
>sp|Q9V2B0|GGR_PYRAB Digeranylgeranylglycerophospholipid reductase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=PYRAB01640 PE=3 SV=1
Length = 393
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 164/368 (44%), Gaps = 27/368 (7%)
Query: 66 AETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLD--IIDRKVTKMKMISPS 121
A +AK G L+++K + K C I + + EFD+P D I+R++ K+ SPS
Sbjct: 18 ARDVAKAGFSVLLVDKKAAIGTPKQCAEGITIEVFKEFDIPYDKRFINREIYGAKIYSPS 77
Query: 122 NVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLY 181
++ H ++ R+V D L A K GA V+ + + RN + V
Sbjct: 78 GYTAELRYK---HVSGVILERKVFDKMLAYYAAKAGAEVLARTEVVDVIRRNGKIVGVRA 134
Query: 182 YTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMV- 240
E GE +E ++ ADG S +A+ AG YA + E ++
Sbjct: 135 KHE--------GEPLEIEAKVIVAADGVESTIAR--KAGINTYAPPHEFDSGYEYEMLIE 184
Query: 241 -YYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVGTGTVTHKGDIKKFQLATRNRAKDKIL 298
Y +L ++ G++V+P Y W+FPK D VG G + K+ L + ++ I
Sbjct: 185 GYDPDLIHLFFGNEVAPRGYVWIFPKDEDRANVGIGIASDHPQTAKYYL-DKWLKENNIP 243
Query: 299 GGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIE 357
KI+ V +P + L V +VGDAA V G G+ A K+ + A+ II+
Sbjct: 244 MRKILEVNVGLVPVGGFVKELVKDNVLVVGDAARQVNPVHGGGMKEAMKAASIAAKWIIK 303
Query: 358 GSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR-SNPAREAFVEMCADEYVQ 416
E L+ Y E+W +T P + L L+K + ++ + FV++ + ++
Sbjct: 304 ALEEENLE----LLKNYSEEWWRTEGPRMEKLLKLRKAMEKLTDEDLDVFVQLVSGTDLE 359
Query: 417 KMTFDSYL 424
K+ +YL
Sbjct: 360 KLAGGNYL 367
>sp|A9A6R1|GGR_METM6 Digeranylgeranylglycerophospholipid reductase OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=MmarC6_0522
PE=3 SV=1
Length = 390
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 169/372 (45%), Gaps = 53/372 (14%)
Query: 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPL 105
N + V V+G GPAG A+ +KNG +T LIE+ + P C A+P + +F +
Sbjct: 5 NDSYDVVVVGAGPAGSMASYNASKNGAKTLLIEKSQEIGTPVRCAEAVP--RLEDFGINP 62
Query: 106 D--IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-IN 162
D + + +I+P N + + K Y+ V R+V D +L R+ + G + +
Sbjct: 63 DPSFVRSYIKGGYLIAP-NGKKVVVKGGKTDGYV--VERKVFDKFLAIRSGQAGTQIAVK 119
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVA-----KSI 217
K++ + +V Y +G++ ++ VI ADG S +A KS
Sbjct: 120 SRVTKIEKTDDGYDVFVNY----------LGDEYIVKTKIVIAADGVESNIAEYAGLKSK 169
Query: 218 NAGDYDYAIAFQE--RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGT 275
+ + A E VK+ D +M+ E Y G D+ P Y W+FPK D V VG G
Sbjct: 170 KSSKEICSCAEYEMTNVKLLDNEMM------EFYFG-DICPKGYIWLFPKGDTVNVGIGI 222
Query: 276 VTHKGDIKKFQLATRNR-AKDKILGGKI-------IRVEAHPIPEHPRPRRLSGRVALVG 327
+ D KK L + + ++ G++ +V P+ P + ++ + +VG
Sbjct: 223 I----DSKKRALDYLDEFLTNPLVEGRLDNAVPIEFKVGGDPVG-GPIEKTVADNIMVVG 277
Query: 328 DAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYW-PTY 386
DAAG+V+ +G GI + G M E E ++ E L Y ++W + Y+ P
Sbjct: 278 DAAGHVSPLTGGGIGLSMACGVMAGEVAAESTK--AEDYSEEFLNLYEKRWKERYYKPLM 335
Query: 387 KVL---DVLQKV 395
K L ++LQK+
Sbjct: 336 KDLKYKNILQKL 347
>sp|A6US00|GGR_METVS Digeranylgeranylglycerophospholipid reductase OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224)
GN=Mevan_1375 PE=3 SV=1
Length = 390
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 158/351 (45%), Gaps = 49/351 (13%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDIIDR 110
V V+G GPAG ++ +KNG +T LIE+ + P C AIP + + I
Sbjct: 10 VVVVGAGPAGSMSSYNASKNGAKTLLIEKAQEIGTPVRCAEAIPRIESFGINPSSEFIRS 69
Query: 111 KVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----INGLF 165
+ +++P+ + + + K Y+ V R++ D +L R+ K G + + GL
Sbjct: 70 YIKGAYLVAPNGKKITV-KGGKTDGYV--VERKIFDKFLAIRSAKEGTKIAVKSRVTGL- 125
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK--SINAGDYD 223
E+ Y ++ +G++ T++ VI ADG S +++ + +
Sbjct: 126 ------EKTEEGYNVFVNH-------LGKEYTVKTKLVIAADGVESTISEYAGLKSKKNH 172
Query: 224 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIK 283
+ ++ + K++ N+ E Y G ++ P Y W+FPK D V VG G + +G K
Sbjct: 173 NEVCSCAEYEMTNVKLL-DNNMMEFYFG-EICPKGYIWLFPKGDTVNVGIGII--EGSKK 228
Query: 284 KFQLATRNRAKDKILGGKI-------IRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKC 336
+ + + +L G++ +V P+ P + + +VGDAAG+V+
Sbjct: 229 AIEY-LDDFLSNPLLEGRLKNAVPVEFKVGGDPVG-GPIKKTFKDNLIVVGDAAGHVSPL 286
Query: 337 SGEGIYFAAK----SGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYW 383
+G GI A +G +CA++I ++ E L +Y +W + ++
Sbjct: 287 TGGGISLAMDCGLIAGEVCAKSI------SSKNYSEEFLSQYETRWKEKHY 331
>sp|Q2NER9|GGR3_METST Digeranylgeranylglycerophospholipid reductase 3 OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=Msp_1307 PE=3 SV=1
Length = 397
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 176/407 (43%), Gaps = 34/407 (8%)
Query: 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLD 106
+ + V +IG GPAG AA +KNG +T +I++K + P C I ++ + D
Sbjct: 4 KEVDVLIIGAGPAGSLAAREASKNGAKTLIIDKKSEIGTPKRCAEGIMSGVLERVHITPD 63
Query: 107 --IIDRKVTKMKMISPSNVAVDIG-QTLKPHEYIGMVRREVLDAYLRERAEKNGASVI-- 161
I RK+ +++SP+N + +TL+ ++ R+V D ++ A + GA V+
Sbjct: 64 ERWIARKIDGARIVSPNNTSAWFTPETLETPATGIILERKVFDKHMTMDAIREGAEVMIK 123
Query: 162 -NGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAG 220
L MK + + + EY+ K + VIGADG VA+
Sbjct: 124 TEALSMKRE-GDGYLVDIKSFNKEYNQIKAHI----------VIGADGPEGHVARWAELN 172
Query: 221 DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVG---TGTV 276
+ ++ + N + V+P Y W+FPK D VG +G
Sbjct: 173 TKVPLAEMESGLQYEMTNLKMKNNSVIQFFFGSVAPGGYAWIFPKGYDTANVGIDISGIK 232
Query: 277 THKGDIKKFQ--LATRNRAKDKILGGKIIRVEAHPIPE-HPRPRRLSGRVALVGDAAGYV 333
K +K +A + KD G+I+ + A P + ++ V LVGDAAG V
Sbjct: 233 AEKSAVKYLNDFIANCDETKD----GQIVEINAGGNPLCGIFDKIITDNVMLVGDAAGCV 288
Query: 334 TKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQ 393
+ +G GI A +SG + + +N R E L++Y + D +K ++
Sbjct: 289 SPITGGGIDTALESGMIAGRVAAKAIKN--RDYSEEKLQEYADYIDSHLGKKFKKYIAIR 346
Query: 394 KVFYRSNPAR-EAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKL 439
V Y S+ + ++ A+ + K++ S L K V+ +P + KL
Sbjct: 347 DVLYNSSDEDLDEYITALANANITKLSTKS-LIKVVMKISPRKLFKL 392
>sp|A4FZB4|GGR_METM5 Digeranylgeranylglycerophospholipid reductase OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_1250
PE=3 SV=1
Length = 390
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 165/368 (44%), Gaps = 45/368 (12%)
Query: 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPL 105
N + V V+G GPAG A+ +KNG +T L+E+ + P C A+P + +F +
Sbjct: 5 NNSYDVVVVGAGPAGSMASYNASKNGAKTLLLEKSQEIGTPVRCAEAVP--RLEDFGINP 62
Query: 106 D--IIDRKVTKMKMISPS--NVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV- 160
D + + +I+P+ V V G+T Y+ V R+V D YL R+ + G +
Sbjct: 63 DPSFVRSYIKGGYLIAPNGKQVVVKGGKT---DGYV--VERKVFDKYLAIRSGQAGTQIA 117
Query: 161 INGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVA-----K 215
+ ++ + +V Y +G++ ++ VI ADG S +A K
Sbjct: 118 VKSRVTGIEKTDDGYNVFVNY----------LGDEYIVKTKIVIAADGVESNIAEYAGLK 167
Query: 216 SINAGDYDYAIAFQE--RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGT 273
S + + A E VK+ D +M+ E Y G D+ P Y W+FPK D V VG
Sbjct: 168 SKKSHKEICSCAEYEMTNVKLLDNEMM------EFYFG-DICPKGYIWLFPKGDTVNVGI 220
Query: 274 GTVTHKGDIKKF--QLATRNRAKDKILGGKII--RVEAHPIPEHPRPRRLSGRVALVGDA 329
G + K + + T K ++ + +V P+ P + ++ + +VGDA
Sbjct: 221 GIIDSKKRAIDYLDEFLTNPLVKGRLDNAVPVEFKVGGDPVG-GPIEKTVADNIMVVGDA 279
Query: 330 AGYVTKCSGEGIYFAAKSGRMCAEAIIEG--SENGTRMIDEGDLRKYLEKWDKTYWPTYK 387
AG+V+ +G GI + G M + + +E+ +R +++ EK+ K K
Sbjct: 280 AGHVSPLTGGGIGLSMSCGLMAGDVAAQSIKAEDHSREFLSAYEKRWKEKYYKPLMKDLK 339
Query: 388 VLDVLQKV 395
+LQK+
Sbjct: 340 YKTILQKL 347
>sp|Q0W349|GGR_UNCMA Digeranylgeranylglycerophospholipid reductase OS=Uncultured
methanogenic archaeon RC-I GN=UNCMA_10520 PE=3 SV=1
Length = 392
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 149/360 (41%), Gaps = 35/360 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLP-LDIID 109
V V+G GP G AA+T A+ G++ LIE++ + P C + + EF P I
Sbjct: 7 VIVVGAGPGGSLAAKTAAEQGLDVLLIEKRQEIGDPVRCAEGVGKAGLQEFVEPDPKWIS 66
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
+ ++ SP V++ + + +E ++ R++ D L + A K GA V
Sbjct: 67 ADIKCARIFSPDGTMVELSEKMAGNEVGFVLERKIFDRELAKMAAKAGAEV--------- 117
Query: 170 LPRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADGANSRVAK--SINAGDYDYAI 226
+ ++ + G G G++ T V+ ADG S+V + IN I
Sbjct: 118 QVKTQATGLIIENGQVCGITGKRHGDEFTARAKVVVAADGVESKVGRWAGINTTLKMKDI 177
Query: 227 AFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKGDIKKF 285
+ + D + N + Y+G +P Y WVFPK D A VG G + K
Sbjct: 178 ETCAQFLMTDINI--KPNSCDFYLGSKYAPGGYVWVFPKGDREANVGLGMLASHYKGKHP 235
Query: 286 QLATRNRAKDKILGGKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344
R DK GKI+ +P P+ +G + LVGDA +G GI A
Sbjct: 236 IEYLREFVADKFPEGKILETVVGAVPVSGMLPKLSTGGLVLVGDAGHVSDPITGGGIINA 295
Query: 345 AKSGRMCAEAIIEGSENGTRMIDEGDLR-KYLEKWD--------KTYWPTYKVLDVLQKV 395
SGR+ I I GD+ K L ++D K+ YK+ +V+ KV
Sbjct: 296 MSSGRIAGNII-------ANCIRAGDVSAKALSRYDAEVREALGKSLDKNYKIKEVVTKV 348
>sp|C5A6E5|GGR_THEGJ Digeranylgeranylglycerophospholipid reductase OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=TGAM_1305 PE=3 SV=1
Length = 395
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 154/343 (44%), Gaps = 38/343 (11%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLD--II 108
V V+G G AG A +A+ G LI++K + K C I + + ++D+P D I
Sbjct: 7 VVVVGAGIAGPIVARNVARAGFSVLLIDKKWAIGTPKQCAEGISIKVFEKYDIPYDKRFI 66
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMK 167
+R++ K+ SPS ++ ++ + G++ R+V D L A K GA V+
Sbjct: 67 NREIYGAKLYSPSGYELE----MRYKDVSGVILERKVFDKMLAYYAAKAGADVL-ARTEA 121
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLE-----VDAVIGADGANSRVAKSINAGDY 222
+D+ R DG G+ K E D ++ ADG S +A+ AG
Sbjct: 122 LDVIRK------------DGKVVGIKAKHEDEPIEIYADVIVAADGVESTIARK--AGIN 167
Query: 223 DYAIAFQERVKIPDEKMV--YYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVGTGTVTHK 279
YA + E ++ + +L ++ G++++P Y WVFPK D VG G +
Sbjct: 168 TYAPPHEFDSSYEYEMLIEGFDPDLIHLWFGNEIAPRGYVWVFPKDEDRANVGIGINSDN 227
Query: 280 GDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVTKCSG 338
K+ L + ++ I K++ + +P + L V +VGDAA V G
Sbjct: 228 PQTAKYYL-DKWLKENNIPAKKLLEINVGVVPVGGFVKELVKNNVLVVGDAARQVNPMHG 286
Query: 339 EGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKT 381
G+ A ++G + ++ I++ E + L+ Y ++W +T
Sbjct: 287 GGMAEAMEAGTIASKWIVKALEEENLSL----LQNYTKEWWET 325
>sp|A6VJ23|GGR_METM7 Digeranylgeranylglycerophospholipid reductase OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_1386
PE=3 SV=1
Length = 390
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 164/365 (44%), Gaps = 39/365 (10%)
Query: 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPL 105
N + V V+G GPAG A+ +KNG +T LIE+ + P C A+P + EF +
Sbjct: 5 NDSYDVVVVGAGPAGSMASYNASKNGAKTLLIEKSQEIGTPVRCAEAVP--RIEEFGINP 62
Query: 106 D--IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-IN 162
D I + +I+P N + + K Y+ V R+V D YL R+ + G + +
Sbjct: 63 DPSFIKSYIKGGYLIAP-NGKKVVVKGGKTDGYV--VERKVFDKYLAIRSGQAGTQIAVK 119
Query: 163 GLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK--SINAG 220
++ + +V Y +G++ ++ VI ADG S +A+ + +
Sbjct: 120 SRVTGIEKTDDGYNVFVNY----------LGDEYVVKSKIVIAADGVESNIAEYAGLKSK 169
Query: 221 DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THK 279
I ++ + +++ E + E Y G D+ P Y W+FPK D V VG G + + K
Sbjct: 170 KNPKEICSCAEYEMTNVQLLDNE-MMEFYFG-DICPKGYIWLFPKGDTVNVGIGVIDSKK 227
Query: 280 GDIKKFQLATRNRAKDKILGGKI---IRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKC 336
I N + L + +V P+ P + + + +VGDAAG+V+
Sbjct: 228 RAIDYLDEFLSNPLVEGRLDNAVPVEFKVGGDPVG-GPIEKTVDDNIIVVGDAAGHVSPL 286
Query: 337 SGEGIYFAAKSGRMCAEAIIEG--SENGTRMIDEGDLRKYLEKWDKTYW-PTYKVL---D 390
+G GI + G M E + +EN + E L Y ++W + Y+ P K L +
Sbjct: 287 TGGGIGLSMDCGLMAGEVAAQSIKAENYS----EEFLSLYEKRWKEKYYKPLMKDLKYKN 342
Query: 391 VLQKV 395
+LQK+
Sbjct: 343 ILQKL 347
>sp|Q8U4J0|GGR_PYRFU Digeranylgeranylglycerophospholipid reductase OS=Pyrococcus
furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF0097 PE=3 SV=1
Length = 393
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 168/376 (44%), Gaps = 43/376 (11%)
Query: 66 AETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLD--IIDRKVTKMKMISPS 121
A +AK G L+++K + K C I + + EFD+P D I+R++ ++ SPS
Sbjct: 18 ARDVAKAGFSVLLVDKKPAIGTPKQCAEGINVNVFKEFDIPYDKRFINREIYGARIYSPS 77
Query: 122 NVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVL 180
+ L+ + G++ R+V D L A K GA V + + V+
Sbjct: 78 GYTAE----LRYDKVSGVILERKVFDKMLAYYAAKAGADV-------------WARTEVI 120
Query: 181 YYTEYDGTKGGV-----GEKRTLEVDAVIGADGANSRVAK--SIN--AGDYDYAIAFQER 231
+G GV GE +E ++ ADG S VA+ IN A +++ A++
Sbjct: 121 DLLRKEGKIMGVKAKHEGELVEIEAKIIVAADGVESTVARLAGINTYAPPHEFDSAYEYE 180
Query: 232 VKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVGTGTVTHKGDIKKFQLATR 290
+ I Y +L ++ G++++P Y WVFPK D VG G + K+ L +
Sbjct: 181 MIIEG----YDPDLIHLWFGNEIAPRGYVWVFPKDEDRANVGIGINSDNEKTAKYYL-DK 235
Query: 291 NRAKDKILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349
++ I KI+ + +P R L VA+VGDAA V G G+Y A K+
Sbjct: 236 WLKENNIPTKKILEINVGLVPVGGFVRELVKENVAVVGDAARQVNPVHGGGMYEAMKAAN 295
Query: 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR-SNPAREAFVE 408
+ A+ I++ E L+ Y ++W + P + L L++ + ++ + FV+
Sbjct: 296 ILAKWIVKALEEENLE----LLKNYTKEWWEVEGPKMERLLKLRRAMEKLTDEDIDVFVQ 351
Query: 409 MCADEYVQKMTFDSYL 424
+ ++K+ +Y
Sbjct: 352 LLGGTDLEKLAGGNYF 367
>sp|O29786|GGR_ARCFU Digeranylgeranylglycerophospholipid reductase OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=AF_0464 PE=1 SV=2
Length = 387
Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 148/341 (43%), Gaps = 29/341 (8%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGE-FDLPLDIID 109
V V+G GPAG AA+T A+ G++ L+E++ + P C I + + F++ I
Sbjct: 4 VVVVGAGPAGSMAAKTAAEQGLKVLLVEKRQEIGTPVRCAEGISRESIEKFFEVDKKWIA 63
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
+VT K+ +P+ + + + + +E ++ R++ D ++ A K GA V M +D
Sbjct: 64 AEVTGAKIYAPNKTEIVMSEEMAGNEVGYVLERKIFDRHVARLAAKAGAEVYVKTAM-VD 122
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVA------KSINAGDYD 223
R + V +GE +E +IGADG S++ K++ + +
Sbjct: 123 FERKDGKVKVKLRR--------LGEDWEVETKILIGADGVESKIGRKAGIIKTLKLNEVE 174
Query: 224 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKGDI 282
+ DE Y+ Y+G +++P Y W+FPK + A VG G + +
Sbjct: 175 SCAQYLMTGLDIDESYTYF------YLGRELAPGGYAWIFPKGNGSANVGIGVLPKMAER 228
Query: 283 KKFQLATRNRAKDKILGGKIIRVEAHPIPEHPR-PRRLSGRVALVGDAAGYVTKCSGEGI 341
+ K+ I GKI+ A +P + ++ + L GDAA + +G GI
Sbjct: 229 TAKEYLDAFIEKEGI-EGKIVEFVAGAVPVYGEIETAVADNIMLAGDAAYHADPITGGGI 287
Query: 342 YFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTY 382
A +G + E + D LR+Y E W +
Sbjct: 288 ANALSAGYYAGKVAAEAVQKNDFSAD--FLRRYDELWKNDF 326
>sp|Q2FUA4|GGR_METHJ Digeranylgeranylglycerophospholipid reductase OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=Mhun_1123 PE=3 SV=1
Length = 402
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 168/409 (41%), Gaps = 53/409 (12%)
Query: 65 AAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLD-IIDRKVTKMKMISPS 121
AA+T A+ G L E++ P C + ++ EF P D + ++ K +I+P
Sbjct: 19 AAKTFAEKGYSVLLTEKRPAIGAPVRCAEGVGKALMHEFFKPEDRWVAAEIEKANIIAPD 78
Query: 122 NVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLY 181
+++ E ++ R+V D L A GA + + V
Sbjct: 79 GFKMELEPEKAGAEVGYVLHRKVFDRDLVWMAAGAGADI------------QVKTRAVTP 126
Query: 182 YTEYDGTKGGV----GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDE 237
E KG + G + + I ADG S+ A+ D + +E
Sbjct: 127 IMEDGAVKGAILNQGGIAQEVRAGLTIAADGVESKFARWCGV---DTTVPLREMETCAQY 183
Query: 238 KMVYYE---NLAEMYVGDDVSPDFYGWVFPKCD---HVAVGTGTVTHKGDIKKFQLATRN 291
M + + E YVG++++P Y W+FPK D +V +G G K + R
Sbjct: 184 LMTGIDIDAHATEFYVGNNIAPGGYVWIFPKGDKTANVGIGVGGDRCKPGNRPIDYLNRF 243
Query: 292 RAKDKILGGKIIRVEAHPIPE-HPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRM 350
A++ GK I + A + P P ++ + +VGDAA +G GIY A +G++
Sbjct: 244 VARN-FPNGKTIELIAGGVSICQPLPCTVANNLMIVGDAARVSDPLTGGGIYAALYTGKL 302
Query: 351 CAEAIIEGSENGTRMIDEGDLR-KYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
+ G++ I++GD + L +D+T+ +Y L K R+ +E FV++
Sbjct: 303 AGDV-------GSKAIEKGDTSTQALMPYDETWRASY-----LGKALERNYQIKEVFVKL 350
Query: 410 CADEY------VQKMTFDSY----LYKRVVPGNPLEDLKLAVNTIGSLV 448
D+ V KM + L K ++ NP +KL + SL+
Sbjct: 351 NDDDLNAIVHSVSKMNLSDFNTLNLIKNIIAANPKLAIKLGKAGLKSLL 399
>sp|O57920|GGR_PYRHO Digeranylgeranylglycerophospholipid reductase OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=PH0181 PE=3 SV=1
Length = 393
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 165/374 (44%), Gaps = 39/374 (10%)
Query: 66 AETLAKNGVETFLIERK--LDNCKPCGGAIPLCMVGEFDLPLD--IIDRKVTKMKMISPS 121
A +AK G L+++K + K C + + +FD+P D I+R++ K+ SPS
Sbjct: 18 ARNVAKAGFSVLLVDKKPAIGAPKQCAEGLTINAFKQFDIPYDKRFINREIYGAKIYSPS 77
Query: 122 NVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVL 180
+ L+ E G++ R+V D L A K GA V+ + V+
Sbjct: 78 GYTAE----LRYKEVSGVILERKVFDKMLAYYAAKAGAEVL-------------ARTEVV 120
Query: 181 YYTEYDGTKGGV-----GEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIP 235
+G GV GE +E ++ ADG S +A+ AG YA +
Sbjct: 121 DVIRREGKIVGVKAKHEGEPMEIEAKVIVAADGVESTIARK--AGIDTYAPPHEFDSGYE 178
Query: 236 DEKMV--YYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVGTGTVTHKGDIKKFQLATRNR 292
E ++ + +L ++ G++V+P Y WVFPK D VG G + K+ L +
Sbjct: 179 YEMIIEGFDPDLIHLFFGNEVAPRGYVWVFPKDEDRANVGIGINSDNEKTAKYYL-DKWL 237
Query: 293 AKDKILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVTKCSGEGIYFAAKSGRMC 351
++ I KI+ V IP + L V +VGDAA V G G+ A K+ +
Sbjct: 238 KENNIPRNKILEVNVGLIPVGGFVKELVKENVLVVGDAARQVNPIHGGGMAEAMKASTIA 297
Query: 352 AEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR-SNPAREAFVEMC 410
++ II+ E L+ Y E+W KT P + L L++ + ++ + FV++
Sbjct: 298 SKWIIKALEEENLE----LLKNYKEEWWKTEGPRMEKLLRLRRAMEKLTDEDLDVFVQLV 353
Query: 411 ADEYVQKMTFDSYL 424
+ ++K+ +Y+
Sbjct: 354 SGTDLEKIAGGNYI 367
>sp|A6UWL1|GGR_META3 Digeranylgeranylglycerophospholipid reductase OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_1307
PE=3 SV=1
Length = 391
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 170/401 (42%), Gaps = 54/401 (13%)
Query: 45 KLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFD 102
+L + V VIG GP G A+ + NG +T LI++ + P C A+P + EF
Sbjct: 3 ELLDSEYDVIVIGAGPGGSMASYHSSINGAKTLLIDKSQEIGTPVRCAEAVP--YLDEFG 60
Query: 103 LPLD--IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV 160
+ D I K+ +++P+ + I + K Y+ V R++ D +L R+ G +
Sbjct: 61 INPDPSFIRSKIDGGILVAPNGKKI-IVKGGKTQGYV--VERKIFDKHLAVRSANVGTKI 117
Query: 161 -INGLFMKMDLPRNFEQPYVLYYTEYDGTKGGV-----GEKRTLEVDAVIGADGANSRVA 214
I + +D YDG K V G+ ++ VI ADG S +A
Sbjct: 118 AIKSRVVGLD---------------YDGEKYTVIVNHLGQIYAIKAKIVIAADGVESSIA 162
Query: 215 K--SINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVG 272
+ I I ++ + K++ +N+ E Y G D+ P Y W+FPK + VG
Sbjct: 163 EMAGIKCKKKVTEICSCAEYEMTNVKLL-DKNMMEFYFG-DICPKGYVWIFPKGETANVG 220
Query: 273 TGTVTHKGDIKKFQLATRNR-AKDKILGGKI-------IRVEAHPIPEHPRPRRLSGRVA 324
G + D KK + N + +L G++ + P+ P + ++
Sbjct: 221 LGII----DSKKKAIDYLNEFLEHPLLEGRLDNATPIEFKCGGAPVG-GPIEKTVADNFM 275
Query: 325 LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWP 384
+VGDAAG ++ SG GIY + G + + + G + E L +Y +W + Y+
Sbjct: 276 VVGDAAGQISPISGGGIYLSLSCGSIAGK--VAGEAIKSNNCSEDYLVEYENRWKEKYYK 333
Query: 385 T----YKVLDVLQKVFYRS-NPAREAFVEMCADEYVQKMTF 420
K VLQK + N +A E + V K+ F
Sbjct: 334 LLMDELKYKKVLQKFSEKELNALADAMDERLEEIDVAKIAF 374
>sp|Q12YW2|GGR1_METBU Digeranylgeranylglycerophospholipid reductase 1 OS=Methanococcoides
burtonii (strain DSM 6242) GN=Mbur_0369 PE=3 SV=1
Length = 408
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 152/350 (43%), Gaps = 45/350 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CG-GAIPLCMVGEFDLPLDIID 109
+ V+G GPAG AA T AK G+ ++E++ + +P C G + +L +
Sbjct: 7 LVVVGAGPAGSIAATTAAKKGLSVLMLEKRQEIGEPVRCAEGVGKKRLRQHIELDEKWLC 66
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----INGL 164
+V+ K+ISP+ + + + E ++ R++ D L E + + G + + GL
Sbjct: 67 GEVSSAKIISPNGTTLTMAEEDAGSEVGYVLDRKIFDRTLVELSGEAGVDIMVKARVTGL 126
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK------SIN 218
++ + E + +G+ ++ VIGADG S+V + S+
Sbjct: 127 IIEENTVCGVEMMH-------------LGKTYSIRSKLVIGADGVESKVGRWAGIDTSLK 173
Query: 219 AGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVT 277
+ F D+ Y+ Y+G+ V+P Y WVFPK +++A VG G +
Sbjct: 174 PSHIETCAQFLVSGVDIDQSSCYF------YMGNKVAPGGYVWVFPKGNNMANVGIGILG 227
Query: 278 HKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEH-PRPRRLSGRVALVGDAAGYVTKC 336
+ KK + + G II A +P P + ++ + LVGDAA
Sbjct: 228 SRAGEKKPIEYLTDFVEANYPNGSIIEQVAGAVPASGPIEKTIANGLMLVGDAARQSDPF 287
Query: 337 SGEGIYFAAK----SGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTY 382
+G GI A +G + AEAI + + E L+KY ++W ++
Sbjct: 288 TGGGISNAMDAGLYAGEVAAEAIAQDD------VSEKILQKYEKRWRGSF 331
>sp|Q57952|GGR_METJA Digeranylgeranylglycerophospholipid reductase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0532 PE=3 SV=1
Length = 391
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 151/325 (46%), Gaps = 30/325 (9%)
Query: 70 AKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDL-PLDIIDRKVTKMKMI-SPSNVAV 125
AKNG +T LIE+ + +P C AIP + EF L P R + K ++ SPS V
Sbjct: 27 AKNGAKTLLIEKSQEIGEPVRCAEAIP--SIEEFGLKPEPEFVRNIIKGGILFSPSGKKV 84
Query: 126 DIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEY 185
+ Q K Y+ V R++ D YL RA K GA V + L R+ + V+ E+
Sbjct: 85 TVTQD-KAQGYV--VERKIFDKYLAIRAAKAGAKVAVKT-TAIGLERDGDYWNVI--VEF 138
Query: 186 DGTKGGVGEKRTLEVDAVIGADGANSRVAK--SINAGDYDYAIAFQERVKIPDEKMVYYE 243
+GE+ ++ VI ADG S +A+ + A I ++ + +++ +
Sbjct: 139 ------LGEEYVIKTKVVIAADGVESNIAEYAGLKAKKKPLEICSCAEYEMTNVELL-DK 191
Query: 244 NLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKF--QLATRNRAKDKILGGK 301
N+ E Y G++V+P Y W+FPK + VG G K ++ + AKD++
Sbjct: 192 NMMEFYFGNEVAPGGYVWIFPKGETANVGLGVRDKKKKAIEYLEEFIENGLAKDRLKDAT 251
Query: 302 IIRVEAHPIP-EHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
I + P P + + + +VGDAAG ++ +G GIY A G + E +
Sbjct: 252 PIEFKVGGAPVSGPIEKTYTDGLLVVGDAAGQISPLTGGGIYLAMDCGLIAGEV----AS 307
Query: 361 NGTRMID--EGDLRKYLEKWDKTYW 383
++ D E L++Y +W + ++
Sbjct: 308 KAIKLNDWSEETLKEYERRWKEKHY 332
>sp|Q6M083|GGR_METMP Digeranylgeranylglycerophospholipid reductase OS=Methanococcus
maripaludis (strain S2 / LL) GN=MMP0388 PE=3 SV=1
Length = 390
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 147/322 (45%), Gaps = 33/322 (10%)
Query: 45 KLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFD 102
K N + V V+G GPAG A+ +KNG +T LIE+ + P C A+P + +F
Sbjct: 2 KALNDSYDVVVVGAGPAGSMASYNASKNGAKTLLIEKSQEIGTPVRCAEAVP--RLEDFG 59
Query: 103 LPLD--IIDRKVTKMKMISPSN--VAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGA 158
+ D + + +I+P+ + V G+T Y+ V R+V D +L R+ + G
Sbjct: 60 INPDPSFVKSYIRGGYLIAPNGKKIVVKGGKT---DGYV--VERKVFDKFLAIRSGQAGT 114
Query: 159 SV-INGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK-- 215
+ + K++ + +V Y +G++ ++ VI ADG S +A+
Sbjct: 115 QIAVKSRVTKIEKTDDGYNVFVNY----------LGDEYIVKSKIVIAADGVESNIAEYA 164
Query: 216 SINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGT 275
+ + I ++ + K++ E + E Y G D+ P Y W+FPK D V VG G
Sbjct: 165 GLKSKKNPKEICSCAEYEMTNVKLLNNE-MMEFYFG-DICPKGYIWLFPKGDTVNVGIGV 222
Query: 276 VTHKGDIKKF--QLATRNRAKDKILGGKII--RVEAHPIPEHPRPRRLSGRVALVGDAAG 331
+ K + + T + ++ + +V P+ P + ++ + +VGDAAG
Sbjct: 223 IDSKKRAIDYLDEFLTHPLVEGRLDNAVPVEFKVGGDPVG-GPIKKTVADNIMVVGDAAG 281
Query: 332 YVTKCSGEGIYFAAKSGRMCAE 353
+V+ +G GI + G M +
Sbjct: 282 HVSPLTGGGIGLSMDCGLMAGD 303
>sp|Q8TQQ6|GGR_METAC Digeranylgeranylglycerophospholipid reductase OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=MA_1484 PE=3 SV=1
Length = 407
Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 150/345 (43%), Gaps = 34/345 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CG-GAIPLCMVGEFDLPLDIID 109
V VIG GPAG AA+T A+ G++ LIE++ + P C G + ++ I
Sbjct: 7 VLVIGAGPAGSIAAKTAAEKGLDVLLIEKRQEIGDPVRCAEGVNKEYLKKHVEIDNSWIC 66
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----INGL 164
+ ++ SP+ V++ + + E ++ R++ D L E A K GA V GL
Sbjct: 67 ADLKGSRIYSPNGTKVEMAEEISGGEVGYVLERKIFDRALAEHAAKAGAEVRVKTRATGL 126
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK----SINAG 220
++ D + +G++ + VIGADG S+V + +
Sbjct: 127 IIEDDFVKGARLM-------------NLGKEYEVRAKIVIGADGVESKVGRWAGIDTSLK 173
Query: 221 DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHK 279
D Q + D Y E Y+G++++P Y W+FPK + A VG G + ++
Sbjct: 174 PIDIETCAQYLIAGADIDPEY----CEFYIGNEIAPGGYVWIFPKGEGKANVGVGILGNR 229
Query: 280 -GDIKKFQLA-TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVTKC 336
G K + N + K KI+ + +P + S + LVGDAA
Sbjct: 230 TGKFKPRPVDYLNNFVEKKFPNAKIVEMVFGGVPVSGSIEKTSVNGLMLVGDAARQSDPI 289
Query: 337 SGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKT 381
+G GI A +G++ EA E +G +++ + Y ++W +T
Sbjct: 290 TGGGILNAMDAGKIAGEAAYEAISSGDVSLEKLE-EVYEKRWRET 333
>sp|Q8PU50|GGR_METMA Digeranylgeranylglycerophospholipid reductase OS=Methanosarcina
mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM
11833 / OCM 88) GN=MM_2499 PE=3 SV=2
Length = 407
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 138/328 (42%), Gaps = 37/328 (11%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CG-GAIPLCMVGEFDLPLDIID 109
V VIG GPAG AA+T A+ G++ LIE++ + P C G C+ ++ I
Sbjct: 7 VLVIGAGPAGSIAAKTAAEKGLDVLLIEKRQEIGDPVRCAEGVNKECLKKHVEIDKRWIC 66
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----INGL 164
+ + SP +++ + + E ++ R+V D L E A GA V GL
Sbjct: 67 ADLKGSCIFSPDGTKIEMAEEISGGEVGYVLERKVFDRALAEHAATAGAEVRVKTRATGL 126
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK--SINAG-- 220
++ D + + +G++ + VIGADG S+V + I+
Sbjct: 127 IIEDDFVKGARLMH-------------LGKEYEVRASIVIGADGVESKVGRWAGIDTALK 173
Query: 221 DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHK 279
D Q + D Y E Y+G++++P Y WVFPK A VG G + K
Sbjct: 174 PVDVETCAQYLIAGADINQEY----CEFYIGNEMAPGGYVWVFPKGGGKANVGIGILGSK 229
Query: 280 GDIKKFQLATRNRAKD----KILGGKIIRVEAHPIPEHPRPRRLS-GRVALVGDAAGYVT 334
+ KF+ + D K +I+ + +P + S + LVGDAA
Sbjct: 230 --MGKFKPRPVDYLNDFVQKKFPDARIVEMVFGGVPVSGSIEKTSVNGLMLVGDAARQSD 287
Query: 335 KCSGEGIYFAAKSGRMCAEAIIEGSENG 362
+G GI A +G++ EA E G
Sbjct: 288 PITGGGILNAMDAGKLAGEAAYEAISAG 315
>sp|O27753|GGR2_METTH Digeranylgeranylglycerophospholipid reductase 2
OS=Methanothermobacter thermautotrophicus (strain ATCC
29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
GN=MTH_1718 PE=3 SV=2
Length = 385
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 142/340 (41%), Gaps = 33/340 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDL-PLDIID 109
V VIGG AG AA A+ G+ L+ER + P C G + L PL
Sbjct: 5 VVVIGGRVAGSTAAYHAARLGLSVLLLERNPEIGTPVQCAGGVSDSFFKSTGLKPLPEFT 64
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMD 169
+ ++ A + + YI + R+ LD YL RA + GA V+ + + D
Sbjct: 65 CTRIRAAAVNGPLGARIVTENPVVRGYI--LERKSLDKYLALRAAEAGADVLT-MSIAGD 121
Query: 170 LPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK------SINAGDYD 223
L + + DG + +E VI ADG S +A+ D
Sbjct: 122 LIFREGSVSGVVFRGPDGVQ-------EVECGMVIAADGVQSSIARKAGLETGFRPADLC 174
Query: 224 YAIAFQ-ERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKGD 281
+ ++ V + E M E Y G +P Y WVFPK + A VG G + K
Sbjct: 175 SCVQYEVAGVDVDPETM-------EFYFGSRFAPSGYLWVFPKGEGRANVGLG-IRRKSC 226
Query: 282 IKKFQLATRNRAKDKILGGKIIRVEAHPIPE-HPRPRRLSGRVALVGDAAGYVTKCSGEG 340
++ L+ NR ++ G K I A +P P R + + +VGDAAG V +G G
Sbjct: 227 SERGPLSYLNRFMEE-RGFKRIEFNAGAVPVCGPIERTFTDGLLVVGDAAGQVDPLTGGG 285
Query: 341 IYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDK 380
I+ AA+ ++ E E E+G +D L +Y +W K
Sbjct: 286 IHLAAECAKIAGEVAAEAIESGR--VDGRFLSRYEMRWRK 323
>sp|A5UNX8|GGR_METS3 Digeranylgeranylglycerophospholipid reductase OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=Msm_1701
PE=3 SV=1
Length = 393
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 155/356 (43%), Gaps = 63/356 (17%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V VIGGGPAG +AA+ A G + L++++ + P A + G L ++ R +
Sbjct: 6 VLVIGGGPAGSSAAKHAALGGAKVILLDKRSEIGAPKRCAEGVSKKGLAKLGIEPSPRWI 65
Query: 113 TK----MKMISPSNVAVDIGQ---TLKPHEYIGMVRREVLDAYLRERAEKNGASV-INGL 164
TK +++ SP V + + L YI + R+V D ++ A + GA + I L
Sbjct: 66 TKEIDGVRLTSPDGTDVWLTEEEIELPEAGYI--LERKVFDKHMAMDAARAGAEIRIKTL 123
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK------SIN 218
MD E +++ + +G+ ++ VI ADG VA+ S
Sbjct: 124 ATGMD---KIEDGFIV-------STESMGKTEEIKAKIVIAADGPEGHVARWAGLKGSAK 173
Query: 219 AGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVT 277
A + + + + E V + ++ E + E Y G +P Y W+FPK D +A VG +
Sbjct: 174 AKEMESGVQY-EMVNVEFDR----EAVIEFYFG-SCAPGGYVWIFPKGDDIANVGLAILQ 227
Query: 278 HKGDIKKFQL---------ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGD 328
HK + AT+N + + V P+ P+ + + + GD
Sbjct: 228 HKATKPAIEYLDDFIAKCPATKNAQAVE------LNVGGDPVGGMPK-KMYDDNILVCGD 280
Query: 329 AAGYVTKCSGEGIYFAAK----SGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDK 380
AAG V +G GI +G++ AEAI EG + +K+L+K+DK
Sbjct: 281 AAGQVNPLTGGGIISGMTGGMYAGQVAAEAIKEGDHS----------KKFLKKYDK 326
>sp|Q12WF0|GGR2_METBU Digeranylgeranylglycerophospholipid reductase 2 OS=Methanococcoides
burtonii (strain DSM 6242) GN=Mbur_1308 PE=3 SV=1
Length = 406
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 149/351 (42%), Gaps = 49/351 (13%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLDI--- 107
V V+G GP G AA+T AK G++ +IE++ + P C VG+F L I
Sbjct: 7 VIVVGAGPGGSIAAKTAAKEGLDVLMIEKRQEIGDPIRCAEG-----VGKFHLKQHIEPD 61
Query: 108 ---IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV---- 160
I V +ISP +++ + + E ++ R++ D L + GA V
Sbjct: 62 PRWICADVKGSYIISPDGTRIEMAEEMSGGEVGYVLERKIFDRALANESALAGAEVRVKT 121
Query: 161 -INGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK---- 215
L ++ D + + +G++ + VIGADG S+V +
Sbjct: 122 RATDLIIENDTVCGIKLMH-------------LGKEYEVRSKIVIGADGVESKVGRWAGI 168
Query: 216 --SINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VG 272
S+ D + + D++ Y+ Y+G++++P Y W+FPK + A VG
Sbjct: 169 ETSVKPSDIETCAQYLVSNANIDQEFCYF------YLGNEIAPAGYVWMFPKGGNKANVG 222
Query: 273 TGTV-THKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPR-PRRLSGRVALVGDAA 330
G + + G K +L K+ + KII + +P R ++ + LVGDAA
Sbjct: 223 IGILGSRAGKDKPIELLNDFIEKN-MPDAKIIEMVIGGVPVCGTIERTIANGLMLVGDAA 281
Query: 331 GYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKT 381
+G GI A +G++ E + G ID L++Y + W T
Sbjct: 282 RQSDPITGGGIINAMDAGKIAGEIAAKAIRKGDCSIDT--LQEYEDLWRAT 330
>sp|A0B573|GGR_METTP Digeranylgeranylglycerophospholipid reductase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=Mthe_0044 PE=3
SV=1
Length = 391
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 156/372 (41%), Gaps = 28/372 (7%)
Query: 65 AAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLP-LDIIDRKVTKMKMISPS 121
AA+T A+ G++ L+E++ + P C + + P I +V ++ +P
Sbjct: 17 AAKTAAEKGLKVVLVEKRQEIGDPVRCAEGVSKARLSSMIKPDPKWIASEVKGARLYAPD 76
Query: 122 NVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLY 181
V + + E ++ R++ D L A + GA V+ +DL R +
Sbjct: 77 GSNVVMSEDKSGDEVGYVLERKIFDRALAMDAARAGARVMVKT-RALDLLRANGSVKGIR 135
Query: 182 YTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK------SINAGDYDYAIAFQERVKIP 235
Y GE +E D VIGADG S+V + ++ GD + F K
Sbjct: 136 AMRY-------GEIIDIEADVVIGADGVESKVGRWAGIDTALKPGDIEVCAQFLLYDKGI 188
Query: 236 DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKGDIKKFQLATRNRAK 294
D++ E ++G++++P Y W FPK +H+A VG G + + + R +
Sbjct: 189 DDE------YCEFFLGNELAPGGYVWSFPKGEHLANVGLGVIGSRSEPGAPVKLLRRFVE 242
Query: 295 DKILGGKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAE 353
++ +I+ + +P P R ++ V LVGDAA +G GI A ++G + E
Sbjct: 243 RRMPEARIVEMVVGGVPVSGPIERTIADGVMLVGDAARQSDPITGGGILNAMQAGMIAGE 302
Query: 354 AIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR-SNPAREAFVEMCAD 412
+ + +G ++ L Y ++W ++ L++ F R S+ +
Sbjct: 303 VVADAVSSGDTGVE--GLMAYEKRWRESIGKQIARHLDLKEFFIRLSDDDLNKLMHSIQS 360
Query: 413 EYVQKMTFDSYL 424
E V KM L
Sbjct: 361 EDVSKMDLRGML 372
>sp|Q2NFF7|GGR2_METST Digeranylgeranylglycerophospholipid reductase 2 OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=Msp_1062 PE=3 SV=1
Length = 393
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 163/356 (45%), Gaps = 45/356 (12%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLD--II 108
+ V+G GP+G AA+ A +G + LI+RK + P C + + + + D I
Sbjct: 6 ILVVGAGPSGSLAAKEAALHGADVILIDRKSEIGSPKRCAEGVSKDGLAQLGIKPDPRWI 65
Query: 109 DRKVTKMKMISPSNVAVDI-GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVI---NGL 164
R + ++++SP+N +V + T+K E ++ R+V D ++ A + GA ++ N
Sbjct: 66 ARDLYGVRLVSPNNTSVWMDNNTIKIPEAGYILERKVFDKHMAMDAARAGAKIMIKTNAT 125
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAG-DYD 223
+K ++ T + +G+ + VI ADG SR+ + AG + +
Sbjct: 126 SLKR------VDDGIIVSTNH------MGKDIDIHAKIVIAADGPESRIGRW--AGLECN 171
Query: 224 YAIAFQERVKIPDEKMVYYENLAE--MYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKG 280
+ E + V EN + ++ G V+P Y W+FPK D +A VG G + +K
Sbjct: 172 TEFKYMESCIQFEMAGVNMENNRDIALFFG-SVAPGGYVWIFPKGDDIANVGIGVLKNKT 230
Query: 281 DIKKFQ-----LATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTK 335
+ ++ + T KD I V P+ + R+ + +VGDAAG+V
Sbjct: 231 NKTAYEHLMEFIKTCPETKDA--QPVEINVGGDPVGGIIKD-RIGDNILVVGDAAGFVNS 287
Query: 336 CSGEGIYFAAKSGR----MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYK 387
+G GI A +SG + A+AI +G + + +L++Y+ D+ YK
Sbjct: 288 LTGGGINSALESGVYAGIVAAQAIKDGDYS------KNNLKEYVSLTDEHIGKHYK 337
>sp|P77337|YDIS_ECOLI Probable electron transfer flavoprotein-quinone oxidoreductase YdiS
OS=Escherichia coli (strain K12) GN=ydiS PE=3 SV=1
Length = 429
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 137/319 (42%), Gaps = 45/319 (14%)
Query: 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP 104
+++ V+G G AG AA +A+ G++ +IER CK G E +P
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 105 ----LDIIDRKVTKMK---MISPSNVAVDIG--QTLKPHEYIGMVRREVLDAYLRERAEK 155
++RKVT+ K + S V +D Q P V R LD +L E+AE+
Sbjct: 61 GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ 120
Query: 156 NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK 215
GA I G+ ++D V + G + G LE + VI ADG NS + +
Sbjct: 121 AGAQFIPGV--RVD-------ALVREGNKVTGVQAG---DDILEANVVILADGVNSMLGR 168
Query: 216 SIN---AGD-YDYAIAFQERVKIPDEK------MVYYENLAEMYVGDDVSPDFYGWVFPK 265
S+ A D + YA+ +E + + E+ + E A ++ G S G F
Sbjct: 169 SLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP-SDGLMGGGFLY 227
Query: 266 CDHVAVGTGTVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPEHPR- 315
+ ++ G V GDI Q + +D I GGK++ AH +PE
Sbjct: 228 TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA 287
Query: 316 --PRRLSGRVALVGDAAGY 332
P+ ++ V +VGDAAG+
Sbjct: 288 MVPQLVNEGVMIVGDAAGF 306
>sp|O26377|GGR1_METTH Digeranylgeranylglycerophospholipid reductase 1
OS=Methanothermobacter thermautotrophicus (strain ATCC
29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
GN=MTH_277 PE=3 SV=1
Length = 397
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 180/414 (43%), Gaps = 57/414 (13%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V VIG GPAG AA+ A G + LI++K + P A + + G L ++ R +
Sbjct: 10 VLVIGAGPAGSTAAKHAALGGADVLLIDKKSEIGAPKRCAEGVSIGGLESLGIEPNPRWI 69
Query: 113 TK----MKMISPSNVAVDIGQ---TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLF 165
TK ++M+SP+ V + L YI + R+V D ++ A + G+ +
Sbjct: 70 TKKLDGVRMVSPNGTDVWLTSDKVELPEAGYI--LERKVFDKFMAMDAARAGSRI----- 122
Query: 166 MKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK--SINAG--- 220
M + E+ Y + +GEK ++ VI ADG SRVA+ +N
Sbjct: 123 MVKTIATGMERTDDGYLVSAE----CMGEKFEIKARIVIAADGPESRVARWAGLNTATRP 178
Query: 221 -DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTH 278
D + A F E V + E N E Y G V+P Y P+ D +A VG G ++
Sbjct: 179 KDMESAAQF-EMVGVEMED----NNCIEFYFG-SVAPGGYALDIPEGDDIANVGLGVLST 232
Query: 279 KGDIKKFQL---------ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDA 329
+ D ++ ATRN + + + P+ P+ + ++ + +VGDA
Sbjct: 233 ETDKSAYEHLLEFVESCPATRNAQPVE------LNIGGDPVGGMPK-KLVADSLMVVGDA 285
Query: 330 AGYVTKCSGEGIYFAAK----SGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPT 385
AG V +G GI K +G++ A A+ EG R+ G+ + ++
Sbjct: 286 AGQVNPLTGGGIISGMKGGMLAGQVAAAAVSEGDVTARRL---GEYERLCR--EEIGDEI 340
Query: 386 YKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKL 439
K L V + + S+ ++ E D +K++ + L K+++ +P LKL
Sbjct: 341 SKYLKVKEYLLTLSDSELDSIAEAFQDVEFEKVS-TTELVKKLIKVSPKALLKL 393
>sp|Q58915|Y1520_METJA Uncharacterized protein MJ1520 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1520 PE=3 SV=1
Length = 387
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 159/376 (42%), Gaps = 49/376 (13%)
Query: 48 NRN-LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLP 104
NRN V +IGGGP G E + KNG ++E P C G I V E P
Sbjct: 2 NRNDYDVVIIGGGPVGCITGEYI-KNG-RVLIVEEHQSIGVPLQCAGLISKNGVKELGNP 59
Query: 105 LDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
++++ + I N V IG YI R+V+D + RA K ++
Sbjct: 60 KGVVNK--VRGAYIYSKNSMVKIGNE-GIRAYI--FERKVMDKDIAIRAAKKCDFLLKA- 113
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS---INAGD 221
+ K++ +N + + + +GEK TL ++GADGA + K +N +
Sbjct: 114 YGKIEKDKNGYKVEITH----------LGEKITLNPKIIVGADGAKTITGKKLGLVNNKN 163
Query: 222 YDYAIAFQ-ERVKIP-DEKMVYYENLAEMYVGDDVSPDFYGWVFPKC-DHVAVGTGTVTH 278
+ + Q E V D+ VY +++ S F+ W+ P D V VG +
Sbjct: 164 REILSSCQFEMVNAEVDDDFVY------IFLDRKYSERFFTWIIPMGKDRVRVG---LID 214
Query: 279 KGDI--KKFQLATRNRAKDKIL-GGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTK 335
+G+ K + N+ +IL I +P + V LVGDAA +V
Sbjct: 215 RGNCYNKLIRFINENKIAKEILKNATITEFSTGSLPIGYLDKTFKDNVLLVGDAACHVKP 274
Query: 336 CSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEG--DLRKYLEKWDKTYWPTYKVLDVLQ 393
SG G+YF A G++ E I ++ ++E +L Y ++W +T+ K ++
Sbjct: 275 LSGGGLYFGAMGGKIAGEVI-------SKYLNEDIENLELYDKRWKETFGSEIKNGLRVR 327
Query: 394 KVFYR-SNPAREAFVE 408
K+F + N + +E
Sbjct: 328 KLFLKLGNDTLDKIIE 343
>sp|Q465Z7|GGR_METBF Digeranylgeranylglycerophospholipid reductase OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=Mbar_A3422 PE=3
SV=1
Length = 407
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 149/342 (43%), Gaps = 34/342 (9%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEF-DLPLDIID 109
V VIG GPAG AA T A+ G++ LIE++ + P C + + ++ ++ I
Sbjct: 7 VLVIGAGPAGSIAARTAAEKGLDVLLIEKRQEIGDPVRCAEGVNKAYLKKYVEIDKRWIC 66
Query: 110 RKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-----INGL 164
++ + +P +++ + L E ++ R+V D L E+A + GA V GL
Sbjct: 67 ADLSASHIYAPDGTKIEMAEELSGGEVGYVLERKVFDRALAEKAAEAGAEVRVKTRATGL 126
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDY 224
++ D + + +G++ + VIGADG S+V +
Sbjct: 127 IIEDDFVKGARLMH-------------LGKEYDVRAKIVIGADGVESKVGRWAGIDTSLK 173
Query: 225 AIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHK-GDI 282
I + + ++ E Y+G++++P Y WVFPK D A VG G + K G
Sbjct: 174 PIDIETCAQYLIAGANIDQHHCEFYIGNEIAPCGYIWVFPKGDGKANVGIGVLGSKTGKF 233
Query: 283 KKFQLATRNR-AKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEG 340
K + N+ ++K +I+ + +P + S + L+GDAA +G G
Sbjct: 234 KPRPVDYLNKFLENKFPDARIVEMVFGGVPVSGSIEKTSTNGLMLIGDAARQSDPITGGG 293
Query: 341 IYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTY 382
I A +G+M EA I GD+ LEK ++ Y
Sbjct: 294 ILNAMNAGKMAGEA-------AYAAISAGDVS--LEKLEEVY 326
>sp|Q6L0M1|GGR_PICTO Digeranylgeranylglycerophospholipid reductase OS=Picrophilus
torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 /
NBRC 100828) GN=PTO0896 PE=3 SV=1
Length = 397
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 144/357 (40%), Gaps = 44/357 (12%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDL-PLD 106
N V VIG GPAG +AA A+ G++T LIE++ D P CG + + E +L P D
Sbjct: 4 NYDVLVIGAGPAGSSAARFAARKGLKTLLIEKRPDIGSPVRCGEGVSKSWMPEVELKPED 63
Query: 107 -IIDRKVTKMKMISPSNVAVDIGQTLKPHEYIG-MVRREVLDAYLRERAEKNGASVINGL 164
I +V ++ PS + +G +V R+ D ++ A GA V
Sbjct: 64 HWISDEVKGARIYGPSEKKPIMLTAENAGNEVGYVVERDKFDKHIAALAASEGADVW--- 120
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDA----VIGADGANSRVAKSINAG 220
+ P + + + G + VD VI ADG S + AG
Sbjct: 121 ---------VKSPALSVIKDGNRIVGAKVRHNSEIVDVRAKMVIAADGFESEFGRW--AG 169
Query: 221 DYDYAIAFQERVKIPDEKMVYY---ENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTV 276
+A + + + +M+ E+ + Y+G +P Y WVFPK H A VG G
Sbjct: 170 LKSLILAKNDIISCVEYRMINVDSDEDYTDFYLG-SCAPAGYIWVFPKGKHEANVGIGVT 228
Query: 277 THKG----DIKKFQLATRNRAKDKILGGKIIRVEAHPIP-EHPRPRRLSGRVALVGDAAG 331
K D+K + L ++ GK I++ + R + + VGDAA
Sbjct: 229 ISKMRDRFDVKNY-LDAFIKSHPGYSKGKTIQLITGGVSVSKVRDKFTLPGLLTVGDAAR 287
Query: 332 YVTKCSGEGIYFAAKSGRMCAEAIIEGSENG----------TRMIDEGDLRKYLEKW 378
+ +G GI SG+ AE + +N RM+ + RK+L W
Sbjct: 288 LIDPITGGGIANGMISGKYAAEVSKKAIDNEDYSQEMMNNYERMVKDKFERKHLRNW 344
>sp|Q2NFZ1|GGR1_METST Digeranylgeranylglycerophospholipid reductase 1 OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=Msp_0874 PE=3 SV=1
Length = 403
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 158/378 (41%), Gaps = 72/378 (19%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLP---LDI-- 107
V VIG GPAG AA+ A G LI++K + P C G +D L+I
Sbjct: 6 VVVIGAGPAGSMAAKHAALGGANVVLIDKKSEIGTP-----KRCAEGVYDEGFKWLNIEP 60
Query: 108 ----IDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVING 163
I +++ + SP + + P + ++ R+V D ++ A + GA ++
Sbjct: 61 DERWIAQRIYGATLHSPDGNSFTVTSEDVPVQGF-ILERKVFDKHMAMDAARAGAKIMIK 119
Query: 164 LFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDA--VIGADGANSRVAKSINAGD 221
+ D+ RN E ++L +G T+EV+A I ADG S +AK +
Sbjct: 120 TLVT-DIKRN-ENGFILSCDSIEG---------TIEVEAKIAICADGPESIMAKKLGINS 168
Query: 222 YD----YAIAFQERVKI---PDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGT 273
+ A E + DEK+ E Y+G DV+ Y W+FPK + VA VG
Sbjct: 169 TTPQNMMSCAQFEMCNVDYNDDEKI-------EFYLGQDVALKGYAWIFPKGNGVANVGL 221
Query: 274 GTVTHKGDIKKFQL---------ATRNRAKDKI-LGGKIIRVEAHPIPEHPRPRRLSGRV 323
G VT D ++ AT+N ++ +GG I I + +
Sbjct: 222 G-VTGNTDKTAYEYIMDFIEKCPATKNAQPIEMNIGGDPINGLIEKIYDD--------NL 272
Query: 324 ALVGDAAGYVTKCSG----EGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWD 379
+ GDAAG V G EG+ +G + A+AI E + + R L +Y EK+
Sbjct: 273 LICGDAAGQVNPIEGGGIIEGMLGGMAAGDVAAKAIKEENYSKER------LHEYYEKYS 326
Query: 380 KTYWPTYKVLDVLQKVFY 397
+ + + L + + Y
Sbjct: 327 ELSFNLIETLPAARDIVY 344
>sp|Q8TUV8|GGR2_METKA Digeranylgeranylglycerophospholipid reductase 2 OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=MK1645 PE=3 SV=2
Length = 396
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 157/395 (39%), Gaps = 59/395 (14%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKV 112
V V+G GPAG AA A+ G + ++ERK + P C G I
Sbjct: 5 VVVVGAGPAGSVAAWAAAEAGCDVLILERKAEIGVP-----KQCAEG--------ISAHG 51
Query: 113 TKMKMISPSN--VAVDIGQTL------KPHEYIG---MVRREVLDAYLRERAEKNGASVI 161
+ I P + +A +I + L K E G ++ R V D +L RA + GA V
Sbjct: 52 LEHAGIEPQDEWIATEISRALIYAPNGKEFEVPGDGYVLERRVFDKWLVVRAVEAGAEV- 110
Query: 162 NGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGD 221
+ R + EY+G + GV E R VI ADG SR+ ++
Sbjct: 111 ---ELLAHARRALLDEGRVVGVEYEG-EDGVHEVRA---RIVIAADGIESRIGRTAG--- 160
Query: 222 YDYAIAFQERVKIPDEKMV---YYENLAEMYVGDDVSPDFYGWVFPKCD---HVAVGT-G 274
++ E +MV E+ +V + P Y W+FPK + +V +G G
Sbjct: 161 LVPSLKPVEMCTCAQYEMVGVDVEEDATHFFVDAEFFPGGYFWIFPKGEGRANVGLGIRG 220
Query: 275 TVTHKGDIKKF---QLATRNRAKDKILGGKIIRVEAHPIPE-HPRPRRLSGRVALVGDAA 330
+ + GD K L + + + V +P P R + LVGDAA
Sbjct: 221 SESEPGDALKVLNRALEDHELISEAVADAVPVEVNVGGVPVCGPVERTYGDGILLVGDAA 280
Query: 331 GYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGD-----LRKYLEKWDKTYWPT 385
V +G G++ + GR+ E E I+E D L++Y ++W++ + T
Sbjct: 281 RQVNPLTGGGLHTSLVCGRIAGEVAAEA-------IEEDDTSASFLKRYQDRWEEEFGKT 333
Query: 386 YKVLDVLQKVFYR-SNPAREAFVEMCADEYVQKMT 419
+K K+F SN A E E + ++
Sbjct: 334 FKYALKASKIFSEMSNEELNALAEALDREDILRLV 368
>sp|Q979Y7|GGR_THEVO Digeranylgeranylglycerophospholipid reductase OS=Thermoplasma
volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 /
NBRC 15438 / GSS1) GN=TV1023 PE=3 SV=1
Length = 396
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 165/410 (40%), Gaps = 78/410 (19%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLD--II 108
V VIGGGP G AA AK G+ T +IE++ + P CG + ++ E D+ D I
Sbjct: 6 VLVIGGGPGGSTAARYAAKYGLRTLMIEKRPEIGSPVRCGEGLSKGILNEADIKPDKSFI 65
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMV-RREVLDAYLRERAEKNGASVINGLFMK 167
+V ++ PS I Q+ K +G V R+ D +L A K GA V
Sbjct: 66 ANEVKGARIYGPSEKRPIILQSEKAGNEVGFVLERDKFDKHLAALAAKAGADV------- 118
Query: 168 MDLPRNFEQPYVLYYTEYDGTKGGVG---EKRTLEVDA--VIGADGANSRVA-----KSI 217
+ + L + DG G E +EV A VI ADG S KS+
Sbjct: 119 ------WVKSPALGVIKEDGKVAGAKIRHENNVVEVRAKMVIAADGFESEFGRWAGLKSV 172
Query: 218 NAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTV 276
D A Q R+ D Y + Y+G ++P Y WVFPK + +A VG G+
Sbjct: 173 ILARNDIISALQYRMINIDVDPDY----TDFYLG-SIAPGGYIWVFPKGEGMANVGIGSS 227
Query: 277 THKGDIKKFQLATRNRAKDKILGGKIIRVEAHP----------------IPEHPRPRRLS 320
+ NR + K + I E HP + + P +
Sbjct: 228 IN---------FIHNRLELKNYLDRFI--ENHPGLKKGQDIQLVTGGVSVSKVKMPITMP 276
Query: 321 GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENG----------TRMIDEGD 370
G + LVGDAA + +G GI A SG A+ E E+ +++ +
Sbjct: 277 G-LMLVGDAARLIDPITGGGIANAIVSGMYAAQVSKEAIESNDYSPQMMGKYEKLVKDRF 335
Query: 371 LRKYLEKW---DKTYWPTYKVLDVLQKVFYR---SNPAREAFVEMCADEY 414
RK+L W +K + + LD L + + + EA ++ A++Y
Sbjct: 336 ERKHLRNWVAKEKLAQLSDETLDKLVDIVSEQVLTTISVEAILKAIAEKY 385
>sp|Q8TVE9|GGR1_METKA Digeranylgeranylglycerophospholipid reductase 1 OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=MK1443 PE=3 SV=1
Length = 375
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 150/360 (41%), Gaps = 57/360 (15%)
Query: 53 VAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLPLD--II 108
V V+G GPAG AA A+ G + ++ERK + P C I + E + D I
Sbjct: 5 VVVVGAGPAGSVAAWAAAEAGCDVLILERKAEIGVPKQCAEGISARALEEVGIRPDDGWI 64
Query: 109 DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKM 168
++ + + PS ++ + Y+ + R V D +L RA + GA V +
Sbjct: 65 AAEIERGILSLPSGSKFEV----EVEGYV--LERRVFDKWLVVRAVEAGAEV----ELLA 114
Query: 169 DLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN-----AGDYD 223
R + EY+G + GV E R VI ADG SR+ ++ D+
Sbjct: 115 HARRALLDEGRVVGVEYEG-EDGVHEVRA---RIVIAADGIESRIGRTAGLVPQLEPDHI 170
Query: 224 YAIAFQERVK---IPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHK 279
A E V P M++++ + P Y WVFPK ++ A VG G +
Sbjct: 171 CTCAQYEVVGDRYDPKAFMIHFDP--------ERIPGGYAWVFPKGENRANVGVGI---R 219
Query: 280 GDIKKFQLATRNRAK------DKILGGKIIRVEAHPIPE-HPRPRRLSGRVALVGDAAGY 332
G LA + + +++ G + V +P P R + LVGDAA
Sbjct: 220 GSESSPGLALKTLDELVEGPLSELVAGTPVEVNVGGVPVCGPVERTYGDGILLVGDAARQ 279
Query: 333 VTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGD-----LRKYLEKWDKTYWPTYK 387
V +G G+ A GR+ E +E I+E D L++Y ++W++ + T++
Sbjct: 280 VNPLTGGGLNTALICGRIAGEVAVEA-------IEEDDTSASFLKRYQDRWEEEFRDTFE 332
>sp|B8GGQ9|GGR_METPE Digeranylgeranylglycerophospholipid reductase OS=Methanosphaerula
palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c)
GN=Mpal_0962 PE=3 SV=1
Length = 399
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 133/323 (41%), Gaps = 26/323 (8%)
Query: 67 ETLAKNGVETFLIERKLDNCKP--CGGAIPLCMVGEFDLP-LDIIDRKVTKMKMISPSNV 123
+T A+ G+ ++E++ P C + ++ EF P I + + ++ P
Sbjct: 21 KTAAEEGLSVLMVEKRPAIGTPVRCAEGVGKELLHEFIGPDPAWISADIERATIVGPDGT 80
Query: 124 AVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASV-INGLFMKMDLPRNFEQPYVLYY 182
++ + +E ++ R+V D L +A + GA V + + L F + L
Sbjct: 81 SMSLEAQRAGNEVGYILDRKVFDRALVWQAAEAGAEVQVKTRAIAPILENGFVRGARLQ- 139
Query: 183 TEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYY 242
G G + VI ADG S+ A+ D A+ E ++ + ++
Sbjct: 140 --------GYGTTTDVRAKVVIAADGVESKFARWCGV---DTAVPVNE-IETCAQYLLTD 187
Query: 243 ENLAE----MYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKGDIKKFQLATRNRAKDKI 297
++ E Y+G++++P+ Y WVFPK A VG G K + NR +K
Sbjct: 188 IDIDESATVFYLGNEIAPEGYAWVFPKGKRTANVGLGISGKKNLPGNRPIDYLNRFVEKN 247
Query: 298 L-GGKIIRVEAHPIPE-HPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
GK I + P +S + +VGDAA +G GIY A SGR+ A+
Sbjct: 248 FPNGKTIECIVGGVSVCTPLASTVSDGLMIVGDAARISDPLTGGGIYNAMYSGRLAAQVA 307
Query: 356 IEGSENGTRMIDEGDLRKYLEKW 378
IE + G L Y ++W
Sbjct: 308 IECIKRGD--CSRAALAAYDQQW 328
>sp|A3CST9|GGR_METMJ Digeranylgeranylglycerophospholipid reductase OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
GN=Memar_0506 PE=3 SV=1
Length = 398
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 145/354 (40%), Gaps = 47/354 (13%)
Query: 73 GVETFLIERKLDNCKP--CGGAIPLCMVGEFDLP-LDIIDRKVTKMKMISPSNVAVDIGQ 129
G LIE++ P C I ++ EF P I + + ++ISP+ A+ + Q
Sbjct: 27 GNTVCLIEKRAAIGTPVRCAEGIGKELLKEFIKPDPRWIAADIERARIISPNGTAISLEQ 86
Query: 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTK 189
+E ++ R++ D L +A + GA VI + + P ++ G K
Sbjct: 87 DRAGNEVGYVLDRKIFDRELVWQAAEAGADVI--VKTRATAP-------IMENGAVRGAK 137
Query: 190 G-GVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYE---NL 245
VG + + VI ADG ++ A+ AG D + +E + M +
Sbjct: 138 VLSVGIPADIRAEVVIAADGTEAQFAR--RAG-LDTVVPLREMMSCAQYLMTDIDIDAGS 194
Query: 246 AEMYVGDDVSPDFYGWVFPKCDHVA-VGTGTVTHKGDIKKFQLATRNRAKD--------K 296
+ Y+G++++P+ Y WVFPK + A VG G K +RAKD
Sbjct: 195 TDFYLGNEIAPEGYLWVFPKGNRTANVGIGISGRKSR-------DGSRAKDYLDRFVAKN 247
Query: 297 ILGGKIIRVEAHPIPE-HPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 355
GK I A +P P ++ + + GDAA V +G GI A +GR+ A+
Sbjct: 248 FPNGKTIEAIAGGVPVCRPLACTVADGLMVAGDAARVVDPITGGGIGNAMYTGRLAAQV- 306
Query: 356 IEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEM 409
++ I GD K W K+ VL+ R+ +E FV +
Sbjct: 307 ------ASKCIAAGDCSKEALMPYDAEWRASKMGTVLE----RNYKVKEYFVTL 350
>sp|Q8CVK0|CBRA_ECOL6 Protein CbrA OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928
/ UPEC) GN=cbrA PE=3 SV=2
Length = 366
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 138/336 (41%), Gaps = 58/336 (17%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDN-----CKPCGGAIPLCMVGEF--- 101
+ VA+IG GPAG A A LA ++ +++K + KPCGG + F
Sbjct: 3 HFDVAIIGLGPAGSALARKLA-GKMQVIALDKKHQHGTEGFSKPCGGLLAPDAQRSFIRD 61
Query: 102 --DLPLDII-DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGA 158
LP+D+I + ++ +K + +VA + + + YI + R D +++ +
Sbjct: 62 GLTLPVDVIANPQIFSVKTV---DVAASLTRNYQ-RSYIN-INRHAFDLWMKSLIPASVE 116
Query: 159 SVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN 218
+ L K + R ++ +V++ + G ++ + ++GADGANS V + +
Sbjct: 117 VYHDSLCRK--IWREDDKWHVIFRAD--------GWEQHITARYLVGADGANSMVRRHLY 166
Query: 219 AGDYDYAI--------AFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA 270
D+ I F E+ +P ++ D+ D Y W K +
Sbjct: 167 P---DHQIRKYVAIQQWFAEKHPVPFYSCIF----------DNAITDCYSWSISKDGYFI 213
Query: 271 VGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVA------ 324
G G K +F + + GK ++ E + P R V
Sbjct: 214 FG-GAYPMKDGQTRFTTLKEKMSAFQFQFGKAVKSEKCTVLF---PSRWQDFVCGKDNAF 269
Query: 325 LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
L+G+AAG+++ S EGI +A S + +++ E
Sbjct: 270 LIGEAAGFISASSLEGISYALDSAEILRSVLLKQPE 305
>sp|Q1R4P6|CBRA_ECOUT Protein CbrA OS=Escherichia coli (strain UTI89 / UPEC) GN=cbrA PE=3
SV=2
Length = 366
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 138/336 (41%), Gaps = 58/336 (17%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDN-----CKPCGGAIPLCMVGEF--- 101
+ VA+IG GPAG A A LA ++ +++K + KPCGG + F
Sbjct: 3 HFDVAIIGLGPAGSALARKLA-GKMQVIALDKKHQHGTEGFSKPCGGLLAPDAQRSFIRD 61
Query: 102 --DLPLDII-DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGA 158
LP+D+I + ++ +K + +VA + + + YI + R D +++ +
Sbjct: 62 GLTLPVDVIANPQIFSVKTV---DVAASLTRNYQ-RSYIN-INRHAFDLWMKSLIPASVE 116
Query: 159 SVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN 218
+ L K + R ++ +V++ + G ++ + ++GADGANS V + +
Sbjct: 117 VYHDSLCRK--IWREDDKWHVIFRAD--------GWEQHITARYLVGADGANSMVRRHLY 166
Query: 219 AGDYDYAI--------AFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA 270
D+ I F E+ +P ++ D+ D Y W K +
Sbjct: 167 P---DHQIRKYVAIQQWFAEKHPVPFYSCIF----------DNAITDCYSWSISKDGYFI 213
Query: 271 VGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVA------ 324
G G K +F + + GK ++ E + P R V
Sbjct: 214 FG-GAYPMKDGQTRFTTLKEKMSAFQFQFGKAVKSEKCTVLF---PSRWQDFVCGKDNAF 269
Query: 325 LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
L+G+AAG+++ S EGI +A S + +++ E
Sbjct: 270 LIGEAAGFISASSLEGISYALDSAEILRSVLLKLPE 305
>sp|A1AHM5|CBRA_ECOK1 Protein CbrA OS=Escherichia coli O1:K1 / APEC GN=cbrA PE=3 SV=2
Length = 366
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 138/336 (41%), Gaps = 58/336 (17%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDN-----CKPCGGAIPLCMVGEF--- 101
+ VA+IG GPAG A A LA ++ +++K + KPCGG + F
Sbjct: 3 HFDVAIIGLGPAGSALARKLA-GKMQVIALDKKHQHGTEGFSKPCGGLLAPDAQRSFIRD 61
Query: 102 --DLPLDII-DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGA 158
LP+D+I + ++ +K + +VA + + + YI + R D +++ +
Sbjct: 62 GLTLPVDVIANPQIFSVKTV---DVAASLTRNYQ-RSYIN-INRHAFDLWMKSLIPASVE 116
Query: 159 SVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN 218
+ L K + R ++ +V++ + G ++ + ++GADGANS V + +
Sbjct: 117 VYHDSLCRK--IWREDDKWHVIFRAD--------GWEQHITARYLVGADGANSMVRRHLY 166
Query: 219 AGDYDYAI--------AFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA 270
D+ I F E+ +P ++ D+ D Y W K +
Sbjct: 167 P---DHQIRKYVAIQQWFAEKHPVPFYSCIF----------DNAITDCYSWSISKDGYFI 213
Query: 271 VGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVA------ 324
G G K +F + + GK ++ E + P R V
Sbjct: 214 FG-GAYPMKDGQTRFTTLKEKMSAFQFQFGKAVKSEKCTVLF---PSRWQDFVCGKDNAF 269
Query: 325 LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
L+G+AAG+++ S EGI +A S + +++ E
Sbjct: 270 LIGEAAGFISASSLEGISYALDSAEILRSVLLKLPE 305
>sp|Q8XBZ8|CBRA_ECO57 Protein CbrA OS=Escherichia coli O157:H7 GN=cbrA PE=3 SV=2
Length = 354
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 136/339 (40%), Gaps = 64/339 (18%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDN-----CKPCGGAIPLCMVGEF--- 101
+ VA+IG GPAG A A LA ++ +++K + KPCGG + F
Sbjct: 3 HFDVAIIGLGPAGSALARKLA-GKMQVIALDKKHQHGTEGFSKPCGGLLAPDAQRSFIRD 61
Query: 102 --DLPLDII-DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGA 158
LP+D+I + ++ +K + +VA + + + YI + R D +++ +
Sbjct: 62 GLTLPVDVIANPQIFSVKTV---DVAASLTRNYQ-RSYIN-INRHAFDLWMKSLIPASVE 116
Query: 159 SVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN 218
+ L K + R ++ +V++ + G ++ + ++GADGANS V
Sbjct: 117 VYHDSLCRK--IWREDDKWHVIFRAD--------GWEQHITARYLVGADGANSMV----- 161
Query: 219 AGDYDYAIAFQERVKIPDEKMVYYENLAEMY-----------VGDDVSPDFYGWVFPKCD 267
R PD ++ Y + + + + D+ D Y W K
Sbjct: 162 -----------RRYLYPDHQIRKYVAIQQWFAEKHPVPFYSCIFDNAITDCYSWSISKDG 210
Query: 268 HVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVA--- 324
+ G G K +F + + GK ++ E + P R V
Sbjct: 211 YFIFG-GAYPMKDGQTRFTTLKEKMSAFQFQFGKAVKSEKCTVL---FPSRWQDFVCGKD 266
Query: 325 ---LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
L+G+AAG+++ S EGI +A S + +++ E
Sbjct: 267 NAFLIGEAAGFISASSLEGISYALDSAEILRSVLLKQPE 305
>sp|P68644|FIXC_ECOLI Protein FixC OS=Escherichia coli (strain K12) GN=fixC PE=3 SV=1
Length = 428
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 122/310 (39%), Gaps = 47/310 (15%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP----LDIID 109
++G G AG AA LA+ G + +IER K G E +P ++
Sbjct: 10 IVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADSAPVE 69
Query: 110 RKVTKMK---MISPSNVAVDI--GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
R +T K M S + +D G P + V R DA+L E+AE+ GA +I G+
Sbjct: 70 RLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGI 129
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADGANSRVAKSINAGD-- 221
V + DG GV + +E VI ADG NS +A+ +
Sbjct: 130 -------------RVDNLVQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAKRV 176
Query: 222 --YDYAIAFQERVKIPDE------KMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGT 273
D A+ +E +++P ++ + A ++ G + G F + +
Sbjct: 177 KPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSP-TDGLMGGGFLYTNENTLSL 235
Query: 274 GTVT---HKGDIKKFQLATRNRAKDK------ILGGKIIRVEAHPIPE---HPRPRRLSG 321
G V H D KK K I GGK++ AH +PE + P +
Sbjct: 236 GLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGD 295
Query: 322 RVALVGDAAG 331
V + GDAAG
Sbjct: 296 GVLIAGDAAG 305
>sp|P68645|FIXC_ECOL6 Protein FixC OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928
/ UPEC) GN=fixC PE=3 SV=1
Length = 428
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 122/310 (39%), Gaps = 47/310 (15%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP----LDIID 109
++G G AG AA LA+ G + +IER K G E +P ++
Sbjct: 10 IVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADSAPVE 69
Query: 110 RKVTKMK---MISPSNVAVDI--GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
R +T K M S + +D G P + V R DA+L E+AE+ GA +I G+
Sbjct: 70 RLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGI 129
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADGANSRVAKSINAGD-- 221
V + DG GV + +E VI ADG NS +A+ +
Sbjct: 130 -------------RVDNLVQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAKRV 176
Query: 222 --YDYAIAFQERVKIPDE------KMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGT 273
D A+ +E +++P ++ + A ++ G + G F + +
Sbjct: 177 KPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSP-TDGLMGGGFLYTNENTLSL 235
Query: 274 GTVT---HKGDIKKFQLATRNRAKDK------ILGGKIIRVEAHPIPE---HPRPRRLSG 321
G V H D KK K I GGK++ AH +PE + P +
Sbjct: 236 GLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGD 295
Query: 322 RVALVGDAAG 331
V + GDAAG
Sbjct: 296 GVLIAGDAAG 305
>sp|Q8Z9K9|FIXC_SALTI Protein FixC OS=Salmonella typhi GN=fixC PE=3 SV=1
Length = 428
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 135/336 (40%), Gaps = 47/336 (13%)
Query: 55 VIGGGPAGGAAAETLAKNGVETFLIER-KLDNCKPCGGAIPLCMVGEFDLP----LDIID 109
++G G AG AA LA+ G + +IER K G E +P I+
Sbjct: 10 IVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLERIIPGFADQAPIE 69
Query: 110 RKVTKMKM-ISPSNVAVDI----GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL 164
R +T K+ N A+ I G+ + V R DA+L E+AE+ GA +I G+
Sbjct: 70 RMITHEKLAFMTDNGAMTIDYCNGEDASASQVSYSVLRSKFDAWLMEQAEEAGAQLITGI 129
Query: 165 FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGD--- 221
+ + R+ + + E DG LE VI ADG NS +A+ +
Sbjct: 130 RVDNVVQRDGK----VVGVEADGD--------ILEAKVVILADGVNSLLAEKLGMAKRVE 177
Query: 222 -YDYAIAFQERVKIPDE------KMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTG 274
A+ +E +++P ++ E A ++ G + G F + + G
Sbjct: 178 ASHVAVGVKELIELPKSVIEDRFQLQGNEGAACLFAGAP-TDGLMGGGFLYTNETTLSLG 236
Query: 275 TVTHKGDIKKFQLATRNRAKD---------KILGGKIIRVEAHPIPE---HPRPRRLSGR 322
V +K + + +D I GGK++ AH +PE + +P +
Sbjct: 237 LVCGLHHLKDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYAAHVVPEAGMNMQPELVGDG 296
Query: 323 VALVGDAAGYVTKC--SGEGIYFAAKSGRMCAEAII 356
V + GDAAG + G+ A +G A+ ++
Sbjct: 297 VLIAGDAAGMCMNLGFTIRGMDLAISAGEAAAKTVL 332
>sp|Q0TB17|CBRA_ECOL5 Protein CbrA OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC)
GN=cbrA PE=3 SV=2
Length = 366
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 138/336 (41%), Gaps = 58/336 (17%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDN-----CKPCGGAIPLCMVGEF--- 101
+ VA+IG GPAG A A LA ++ +++K + KPCGG + F
Sbjct: 3 HFDVAIIGLGPAGSALARKLA-GKMQVIALDKKHQHGTEGFSKPCGGLLAPDAQRSFIRD 61
Query: 102 --DLPLDII-DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGA 158
LP+D+I + ++ +K + +VA + + + YI + R D +++ +
Sbjct: 62 GLTLPVDVIANPQIFSVKTV---DVAASLTRNYQ-RSYIN-INRHAFDLWMKSLIPASVE 116
Query: 159 SVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN 218
+ L K + R ++ +V++ + G ++ + ++GADGANS V + +
Sbjct: 117 VYHDSLCRK--IWREDDKWHVIFRAD--------GWEQHITARYLVGADGANSMVRRHLY 166
Query: 219 AGDYDYAI--------AFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA 270
D+ I F E+ +P ++ D+ D Y W K +
Sbjct: 167 P---DHQIRKYVAIQQWFAEKHPVPFYSCIF----------DNAITDCYSWSISKDGYFI 213
Query: 271 VGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVA------ 324
G G K +F + + GK ++ E + P R V
Sbjct: 214 FG-GAYPMKDGQTRFTALKEKMSAFQFQFGKAVKSEKCTVLF---PSRWQDFVCGKDNAF 269
Query: 325 LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
L+G+AAG+++ S EGI +A S + +++ E
Sbjct: 270 LIGEAAGFISASSLEGISYALDSAEILRSVLLKLPE 305
>sp|Q3YWC2|CBRA_SHISS Protein CbrA OS=Shigella sonnei (strain Ss046) GN=cbrA PE=3 SV=2
Length = 354
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 138/336 (41%), Gaps = 58/336 (17%)
Query: 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDN-----CKPCGGAIPLCMVGEF--- 101
+ VA+IG GPAG A A LA ++ +++K + KPCGG + F
Sbjct: 3 HFDVAIIGLGPAGSALARKLA-GKMQVIALDKKHQHGTEGFSKPCGGLLAPDAQRSFIRD 61
Query: 102 --DLPLDII-DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGA 158
LP+D+I + ++ +K + +VA + + + YI + R D +++ +
Sbjct: 62 GLTLPVDVIANPQIFSVKTV---DVAASLTRNYQ-RSYIN-INRHAFDLWMKSLIPASVE 116
Query: 159 SVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSIN 218
+ L K + R ++ +V++ + G ++ + ++GADGANS V + +
Sbjct: 117 VYHDSLCRK--IWREDDKWHVIFRAD--------GWEQHITARYLVGADGANSMVRRHLY 166
Query: 219 AGDYDYAI--------AFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA 270
D+ I F E+ +P ++ D+ D Y W K +
Sbjct: 167 P---DHQIRKYVAIQQWFAEKHPVPFYSCIF----------DNAITDCYSWSISKDGYFI 213
Query: 271 VGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVA------ 324
G G K +F + + GK ++ E + P R V
Sbjct: 214 FG-GAYPMKDGQTRFTTLKEKMSAFQFQFGKAVKSEKCTVLF---PSRWQDFVCGKDNAF 269
Query: 325 LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360
L+G+AAG+++ S EGI +A S + +++ E
Sbjct: 270 LIGEAAGFISASSLEGISYALDSADILRSVLLKQPE 305
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 179,176,105
Number of Sequences: 539616
Number of extensions: 8170906
Number of successful extensions: 23833
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 122
Number of HSP's that attempted gapping in prelim test: 23487
Number of HSP's gapped (non-prelim): 329
length of query: 462
length of database: 191,569,459
effective HSP length: 121
effective length of query: 341
effective length of database: 126,275,923
effective search space: 43060089743
effective search space used: 43060089743
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)