Query 012488
Match_columns 462
No_of_seqs 234 out of 2728
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 10:25:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012488.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012488hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oz2_A Digeranylgeranylglycero 100.0 4.8E-42 1.6E-46 339.9 34.5 368 50-434 4-388 (397)
2 3cgv_A Geranylgeranyl reductas 100.0 4.6E-39 1.6E-43 319.0 33.7 366 50-433 4-387 (397)
3 3atr_A Conserved archaeal prot 100.0 1.3E-36 4.3E-41 306.5 31.2 331 49-398 5-357 (453)
4 2qa2_A CABE, polyketide oxygen 100.0 3E-35 1E-39 299.0 36.3 327 47-398 9-352 (499)
5 2qa1_A PGAE, polyketide oxygen 100.0 3.9E-35 1.4E-39 298.1 35.9 327 47-398 8-351 (500)
6 3fmw_A Oxygenase; mithramycin, 100.0 2.8E-35 9.6E-40 303.1 27.1 333 46-401 45-399 (570)
7 3rp8_A Flavoprotein monooxygen 100.0 7.3E-34 2.5E-38 282.6 31.5 326 48-402 21-376 (407)
8 1pn0_A Phenol 2-monooxygenase; 100.0 2.5E-33 8.7E-38 293.6 32.3 343 49-399 7-426 (665)
9 3ihg_A RDME; flavoenzyme, anth 100.0 7.5E-33 2.5E-37 284.8 34.3 333 46-394 1-371 (535)
10 1k0i_A P-hydroxybenzoate hydro 100.0 1.9E-33 6.5E-38 278.4 26.3 328 49-397 1-351 (394)
11 2gmh_A Electron transfer flavo 100.0 1.2E-32 4.1E-37 284.7 32.1 400 48-459 33-501 (584)
12 2x3n_A Probable FAD-dependent 100.0 1.2E-33 4.1E-38 280.4 23.5 328 46-401 2-364 (399)
13 2dkh_A 3-hydroxybenzoate hydro 100.0 3.3E-32 1.1E-36 284.7 32.4 339 49-398 31-416 (639)
14 3nix_A Flavoprotein/dehydrogen 100.0 2.3E-32 7.8E-37 273.1 29.4 320 47-380 2-343 (421)
15 2r0c_A REBC; flavin adenine di 100.0 5.3E-32 1.8E-36 278.6 28.5 330 49-397 25-382 (549)
16 4hb9_A Similarities with proba 100.0 8.7E-32 3E-36 267.7 26.8 316 51-387 2-375 (412)
17 3e1t_A Halogenase; flavoprotei 100.0 4.4E-31 1.5E-35 269.9 32.3 333 48-395 5-368 (512)
18 2vou_A 2,6-dihydroxypyridine h 100.0 5.5E-31 1.9E-35 260.9 29.4 323 47-398 2-370 (397)
19 3i3l_A Alkylhalidase CMLS; fla 100.0 8.6E-31 2.9E-35 270.1 31.4 326 50-393 23-378 (591)
20 3alj_A 2-methyl-3-hydroxypyrid 100.0 2.2E-31 7.5E-36 262.2 23.0 311 50-387 11-341 (379)
21 3c96_A Flavin-containing monoo 100.0 7.2E-30 2.5E-34 254.0 31.5 314 50-386 4-362 (410)
22 2xdo_A TETX2 protein; tetracyc 100.0 6.5E-30 2.2E-34 253.3 28.8 314 49-390 25-379 (398)
23 2pyx_A Tryptophan halogenase; 100.0 2.4E-28 8.1E-33 250.4 27.5 314 46-384 3-403 (526)
24 2weu_A Tryptophan 5-halogenase 100.0 2.5E-27 8.5E-32 242.4 28.2 314 49-391 1-402 (511)
25 2e4g_A Tryptophan halogenase; 100.0 5.9E-27 2E-31 241.2 31.0 316 46-389 21-423 (550)
26 3c4a_A Probable tryptophan hyd 100.0 1.3E-27 4.5E-32 235.3 24.6 303 51-398 1-333 (381)
27 2aqj_A Tryptophan halogenase, 100.0 5.8E-27 2E-31 240.9 26.8 309 49-385 4-388 (538)
28 3ihm_A Styrene monooxygenase A 99.9 1.3E-23 4.4E-28 209.9 23.2 291 48-379 20-360 (430)
29 2bry_A NEDD9 interacting prote 99.8 3.6E-20 1.2E-24 187.9 15.2 145 48-219 90-238 (497)
30 1yvv_A Amine oxidase, flavin-c 99.7 4.5E-16 1.5E-20 150.0 25.7 284 50-362 2-330 (336)
31 1ryi_A Glycine oxidase; flavop 99.6 1.7E-14 5.9E-19 141.4 18.8 185 139-356 160-360 (382)
32 3dme_A Conserved exported prot 99.5 1E-12 3.5E-17 127.8 24.1 72 139-220 146-220 (369)
33 1y56_B Sarcosine oxidase; dehy 99.5 7E-13 2.4E-17 129.9 22.2 191 139-357 145-354 (382)
34 3kkj_A Amine oxidase, flavin-c 99.5 3.3E-13 1.1E-17 125.5 17.3 36 49-84 1-36 (336)
35 2gag_B Heterotetrameric sarcos 99.5 9.3E-13 3.2E-17 130.1 21.3 189 140-357 171-374 (405)
36 2gf3_A MSOX, monomeric sarcosi 99.5 9.1E-12 3.1E-16 122.2 25.7 66 139-218 146-213 (389)
37 2ywl_A Thioredoxin reductase r 99.4 4.9E-12 1.7E-16 110.2 18.4 116 51-218 2-117 (180)
38 3nyc_A D-arginine dehydrogenas 99.4 3.9E-12 1.3E-16 124.4 19.8 68 139-220 150-219 (381)
39 2qcu_A Aerobic glycerol-3-phos 99.4 5E-12 1.7E-16 128.4 20.3 205 139-359 145-373 (501)
40 3v76_A Flavoprotein; structura 99.4 4.8E-13 1.6E-17 132.2 11.4 149 46-211 23-187 (417)
41 2i0z_A NAD(FAD)-utilizing dehy 99.4 1.9E-13 6.4E-18 136.9 7.5 159 46-220 22-211 (447)
42 2oln_A NIKD protein; flavoprot 99.4 1.9E-11 6.5E-16 120.4 21.7 67 139-219 149-217 (397)
43 3da1_A Glycerol-3-phosphate de 99.4 3.9E-11 1.3E-15 123.2 23.4 209 139-360 166-393 (561)
44 3dje_A Fructosyl amine: oxygen 99.4 3.1E-11 1.1E-15 120.5 20.6 61 139-212 157-222 (438)
45 3ps9_A TRNA 5-methylaminomethy 99.4 2.5E-11 8.4E-16 127.9 20.0 66 139-217 413-480 (676)
46 3pvc_A TRNA 5-methylaminomethy 99.3 5.1E-11 1.7E-15 125.6 21.5 67 139-218 408-477 (689)
47 3i6d_A Protoporphyrinogen oxid 99.3 1.1E-09 3.6E-14 110.2 29.0 38 46-83 1-44 (470)
48 3nlc_A Uncharacterized protein 99.3 4.6E-12 1.6E-16 128.7 11.5 144 48-212 105-278 (549)
49 2cul_A Glucose-inhibited divis 99.3 7.5E-12 2.5E-16 113.7 11.0 129 50-219 3-133 (232)
50 3nrn_A Uncharacterized protein 99.3 4.6E-10 1.6E-14 111.3 23.4 33 51-83 1-33 (421)
51 1rp0_A ARA6, thiazole biosynth 99.3 6.4E-11 2.2E-15 111.0 15.6 150 49-218 38-198 (284)
52 3ces_A MNMG, tRNA uridine 5-ca 99.3 4E-11 1.4E-15 122.8 14.0 149 49-216 27-186 (651)
53 3c4n_A Uncharacterized protein 99.2 1.2E-11 4E-16 122.3 9.0 158 46-220 32-247 (405)
54 3jsk_A Cypbp37 protein; octame 99.2 7.5E-11 2.6E-15 111.9 13.8 152 49-217 78-257 (344)
55 2uzz_A N-methyl-L-tryptophan o 99.2 8.8E-11 3E-15 114.4 14.5 60 139-212 145-205 (372)
56 3ab1_A Ferredoxin--NADP reduct 99.2 3.9E-11 1.3E-15 116.5 11.8 122 50-216 14-136 (360)
57 3qj4_A Renalase; FAD/NAD(P)-bi 99.2 8.7E-10 3E-14 106.2 21.2 137 51-209 2-163 (342)
58 3itj_A Thioredoxin reductase 1 99.2 3.9E-11 1.3E-15 115.2 11.7 125 47-212 19-143 (338)
59 1qo8_A Flavocytochrome C3 fuma 99.2 1.5E-11 5.1E-16 126.8 9.2 161 48-216 119-317 (566)
60 2gqf_A Hypothetical protein HI 99.2 7.7E-11 2.6E-15 115.9 13.3 146 50-211 4-168 (401)
61 3axb_A Putative oxidoreductase 99.2 1.6E-09 5.5E-14 108.4 23.2 71 139-220 177-264 (448)
62 2rgh_A Alpha-glycerophosphate 99.2 1.3E-09 4.3E-14 112.2 22.2 73 140-219 185-259 (571)
63 2zbw_A Thioredoxin reductase; 99.2 4E-11 1.4E-15 115.1 10.3 122 49-216 4-126 (335)
64 4a9w_A Monooxygenase; baeyer-v 99.2 3.3E-11 1.1E-15 116.5 9.6 129 50-212 3-133 (357)
65 3cp8_A TRNA uridine 5-carboxym 99.2 1E-10 3.4E-15 119.8 13.0 147 46-212 17-175 (641)
66 2zxi_A TRNA uridine 5-carboxym 99.2 9.7E-11 3.3E-15 119.5 12.3 146 49-214 26-183 (637)
67 1y0p_A Fumarate reductase flav 99.2 3.9E-11 1.3E-15 123.8 9.6 156 49-214 125-320 (571)
68 3fbs_A Oxidoreductase; structu 99.2 8E-11 2.7E-15 110.8 10.9 113 49-213 1-114 (297)
69 1vdc_A NTR, NADPH dependent th 99.2 6.3E-11 2.1E-15 113.6 10.0 120 49-213 7-126 (333)
70 3ka7_A Oxidoreductase; structu 99.2 1.2E-08 4.1E-13 101.1 26.8 33 51-83 1-33 (425)
71 4a5l_A Thioredoxin reductase; 99.2 1.7E-10 5.7E-15 109.7 12.7 118 50-211 4-121 (314)
72 3f8d_A Thioredoxin reductase ( 99.2 1.2E-10 4.2E-15 110.8 11.8 114 48-212 13-126 (323)
73 4dgk_A Phytoene dehydrogenase; 99.2 5.3E-09 1.8E-13 106.1 24.3 64 144-219 222-286 (501)
74 4ap3_A Steroid monooxygenase; 99.2 9.8E-11 3.4E-15 119.8 11.4 140 47-212 18-160 (549)
75 3gwf_A Cyclohexanone monooxyge 99.2 1.6E-10 5.4E-15 118.0 12.9 133 49-212 7-148 (540)
76 2gv8_A Monooxygenase; FMO, FAD 99.2 1.4E-10 4.9E-15 116.0 12.4 151 49-212 5-178 (447)
77 1pj5_A N,N-dimethylglycine oxi 99.2 3.2E-09 1.1E-13 114.3 23.7 68 139-220 147-217 (830)
78 2gjc_A Thiazole biosynthetic e 99.2 5.7E-10 1.9E-14 105.3 15.5 155 48-218 63-246 (326)
79 2q0l_A TRXR, thioredoxin reduc 99.2 1.4E-10 4.8E-15 110.1 11.4 114 51-213 2-116 (311)
80 1c0p_A D-amino acid oxidase; a 99.1 3E-09 1E-13 103.2 20.6 36 48-83 4-39 (363)
81 1w4x_A Phenylacetone monooxyge 99.1 4.4E-10 1.5E-14 115.1 14.7 139 48-213 14-156 (542)
82 2q7v_A Thioredoxin reductase; 99.1 2.9E-10 9.9E-15 108.6 12.1 118 49-212 7-124 (325)
83 3g3e_A D-amino-acid oxidase; F 99.1 3.9E-09 1.3E-13 101.9 19.8 33 51-83 1-39 (351)
84 3lzw_A Ferredoxin--NADP reduct 99.1 2.5E-10 8.4E-15 109.2 11.1 116 50-211 7-123 (332)
85 2a87_A TRXR, TR, thioredoxin r 99.1 4.4E-10 1.5E-14 107.9 12.6 115 48-212 12-127 (335)
86 4fk1_A Putative thioredoxin re 99.1 2.7E-10 9.4E-15 107.8 10.8 111 50-211 6-117 (304)
87 4at0_A 3-ketosteroid-delta4-5a 99.1 8.9E-10 3E-14 112.0 14.4 60 144-212 203-265 (510)
88 1trb_A Thioredoxin reductase; 99.1 5.2E-10 1.8E-14 106.5 12.0 114 49-212 4-117 (320)
89 3nks_A Protoporphyrinogen oxid 99.1 1.3E-08 4.3E-13 102.6 22.7 34 50-83 2-37 (477)
90 1fl2_A Alkyl hydroperoxide red 99.1 5.2E-10 1.8E-14 106.0 11.8 115 50-212 1-116 (310)
91 3cty_A Thioredoxin reductase; 99.1 4.2E-10 1.4E-14 107.2 11.1 113 49-212 15-127 (319)
92 2ivd_A PPO, PPOX, protoporphyr 99.1 2E-08 6.8E-13 101.2 23.2 36 48-83 14-49 (478)
93 2xve_A Flavin-containing monoo 99.1 2.9E-10 9.8E-15 114.2 9.2 152 50-214 2-169 (464)
94 4gcm_A TRXR, thioredoxin reduc 99.1 1.1E-09 3.8E-14 103.9 12.7 114 46-211 2-116 (312)
95 3uox_A Otemo; baeyer-villiger 99.1 2.5E-10 8.6E-15 116.6 8.6 137 48-212 7-148 (545)
96 1d4d_A Flavocytochrome C fumar 99.0 4.3E-10 1.5E-14 115.8 10.0 158 49-214 125-320 (572)
97 1s3e_A Amine oxidase [flavin-c 99.0 6.2E-08 2.1E-12 98.7 25.8 35 49-83 3-37 (520)
98 3lov_A Protoporphyrinogen oxid 99.0 5.7E-08 2E-12 97.8 24.3 34 50-83 4-39 (475)
99 3d1c_A Flavin-containing putat 99.0 2.8E-09 9.6E-14 103.5 12.6 136 50-212 4-144 (369)
100 2vvm_A Monoamine oxidase N; FA 99.0 1E-07 3.4E-12 96.5 24.5 34 50-83 39-72 (495)
101 1hyu_A AHPF, alkyl hydroperoxi 99.0 2.3E-09 7.8E-14 109.2 12.1 116 49-212 211-327 (521)
102 3s5w_A L-ornithine 5-monooxyge 98.9 2.4E-09 8.2E-14 107.6 10.5 152 49-212 29-193 (463)
103 1kf6_A Fumarate reductase flav 98.9 2E-09 6.7E-14 111.3 9.9 68 143-217 134-203 (602)
104 1chu_A Protein (L-aspartate ox 98.9 1.7E-09 5.8E-14 110.4 8.9 37 47-84 5-41 (540)
105 2h88_A Succinate dehydrogenase 98.9 2.7E-09 9.4E-14 110.2 10.5 64 143-213 155-219 (621)
106 3k7m_X 6-hydroxy-L-nicotine ox 98.9 4.9E-07 1.7E-11 89.7 25.8 33 51-83 2-34 (431)
107 2wdq_A Succinate dehydrogenase 98.9 2.7E-09 9.1E-14 110.0 7.9 64 143-213 143-208 (588)
108 3fpz_A Thiazole biosynthetic e 98.8 1.7E-08 5.7E-13 96.5 12.2 35 49-83 64-100 (326)
109 3r9u_A Thioredoxin reductase; 98.8 1.5E-08 5.2E-13 95.9 11.4 115 49-211 3-118 (315)
110 2e5v_A L-aspartate oxidase; ar 98.8 1.8E-09 6.2E-14 108.5 5.0 32 52-83 1-32 (472)
111 3gyx_A Adenylylsulfate reducta 98.8 3.7E-08 1.3E-12 102.5 14.3 158 48-212 20-234 (662)
112 4b63_A L-ornithine N5 monooxyg 98.8 9E-09 3.1E-13 104.2 8.6 148 49-210 38-213 (501)
113 1jnr_A Adenylylsulfate reducta 98.8 1.8E-08 6.2E-13 105.0 10.7 157 49-212 21-219 (643)
114 2bs2_A Quinol-fumarate reducta 98.8 6.3E-09 2.2E-13 108.3 6.8 36 48-83 3-38 (660)
115 2a8x_A Dihydrolipoyl dehydroge 98.8 1.2E-09 4E-14 109.9 1.1 143 50-214 3-149 (464)
116 3o0h_A Glutathione reductase; 98.7 4.7E-09 1.6E-13 106.0 3.3 38 46-83 22-59 (484)
117 3l8k_A Dihydrolipoyl dehydroge 98.7 1.7E-09 5.7E-14 108.8 -0.0 34 50-83 4-37 (466)
118 1q1r_A Putidaredoxin reductase 98.7 6.2E-08 2.1E-12 96.2 10.8 111 49-213 3-116 (431)
119 1ojt_A Surface protein; redox- 98.7 4.8E-09 1.7E-13 105.8 2.8 35 49-83 5-39 (482)
120 3sx6_A Sulfide-quinone reducta 98.7 1.1E-08 3.8E-13 101.8 5.0 108 51-214 5-115 (437)
121 4gut_A Lysine-specific histone 98.7 1.5E-06 5.2E-11 91.9 21.2 35 49-83 335-369 (776)
122 1ebd_A E3BD, dihydrolipoamide 98.7 6.1E-09 2.1E-13 104.3 2.8 137 50-213 3-147 (455)
123 1dxl_A Dihydrolipoamide dehydr 98.7 3.8E-09 1.3E-13 106.3 1.2 148 49-216 5-156 (470)
124 4dna_A Probable glutathione re 98.7 5.9E-09 2E-13 104.7 2.4 36 47-82 2-37 (463)
125 3urh_A Dihydrolipoyl dehydroge 98.7 6.9E-09 2.3E-13 105.0 2.9 35 49-83 24-58 (491)
126 1v59_A Dihydrolipoamide dehydr 98.6 7E-09 2.4E-13 104.6 2.5 34 50-83 5-38 (478)
127 1zmd_A Dihydrolipoyl dehydroge 98.6 4.6E-09 1.6E-13 105.8 1.1 36 48-83 4-39 (474)
128 3h8l_A NADH oxidase; membrane 98.6 3.9E-08 1.3E-12 97.0 7.6 110 51-212 2-114 (409)
129 3qfa_A Thioredoxin reductase 1 98.6 3.4E-08 1.2E-12 100.5 7.0 35 49-83 31-65 (519)
130 3dgh_A TRXR-1, thioredoxin red 98.6 4.8E-08 1.6E-12 98.6 6.8 36 48-83 7-42 (483)
131 2hqm_A GR, grase, glutathione 98.6 4.8E-08 1.6E-12 98.5 6.8 35 49-83 10-44 (479)
132 3oc4_A Oxidoreductase, pyridin 98.6 9.2E-08 3.2E-12 95.6 8.7 33 51-83 3-37 (452)
133 3dgz_A Thioredoxin reductase 2 98.6 3.5E-08 1.2E-12 99.7 5.4 36 48-83 4-39 (488)
134 3lxd_A FAD-dependent pyridine 98.6 8E-08 2.7E-12 95.0 7.6 109 48-210 7-118 (415)
135 2eq6_A Pyruvate dehydrogenase 98.6 1.8E-08 6E-13 101.2 2.9 34 50-83 6-39 (464)
136 3dk9_A Grase, GR, glutathione 98.6 4.6E-08 1.6E-12 98.5 5.8 35 49-83 19-53 (478)
137 3lad_A Dihydrolipoamide dehydr 98.6 1.2E-08 4E-13 102.9 1.3 35 49-83 2-36 (476)
138 2qae_A Lipoamide, dihydrolipoy 98.5 1.7E-08 5.7E-13 101.5 2.0 35 49-83 1-35 (468)
139 1onf_A GR, grase, glutathione 98.5 6.5E-08 2.2E-12 98.0 6.1 35 49-83 1-35 (500)
140 4b1b_A TRXR, thioredoxin reduc 98.5 2.4E-08 8.3E-13 101.4 2.9 145 50-212 42-198 (542)
141 2bc0_A NADH oxidase; flavoprot 98.5 3.3E-07 1.1E-11 92.5 10.9 35 49-83 34-71 (490)
142 3klj_A NAD(FAD)-dependent dehy 98.5 6.7E-08 2.3E-12 94.4 5.6 108 49-211 8-116 (385)
143 3h28_A Sulfide-quinone reducta 98.5 1.7E-08 5.9E-13 100.3 1.3 34 50-83 2-37 (430)
144 3ics_A Coenzyme A-disulfide re 98.5 2.7E-07 9.2E-12 95.5 9.9 114 50-211 36-152 (588)
145 1xdi_A RV3303C-LPDA; reductase 98.5 1.4E-07 4.7E-12 95.6 7.3 35 49-83 1-38 (499)
146 1ges_A Glutathione reductase; 98.5 2.8E-08 9.7E-13 99.3 2.1 35 49-83 3-37 (450)
147 2yqu_A 2-oxoglutarate dehydrog 98.5 2.7E-08 9.2E-13 99.6 1.9 34 50-83 1-34 (455)
148 3kd9_A Coenzyme A disulfide re 98.5 3.2E-07 1.1E-11 91.6 8.8 34 50-83 3-38 (449)
149 3pl8_A Pyranose 2-oxidase; sub 98.5 6.1E-07 2.1E-11 93.0 10.9 36 49-84 45-80 (623)
150 3iwa_A FAD-dependent pyridine 98.4 5.5E-07 1.9E-11 90.5 10.1 35 50-84 3-39 (472)
151 3ef6_A Toluene 1,2-dioxygenase 98.4 7.3E-07 2.5E-11 87.8 10.8 107 50-211 2-111 (410)
152 2r9z_A Glutathione amide reduc 98.4 1E-07 3.5E-12 95.6 4.6 35 49-83 3-37 (463)
153 3cgb_A Pyridine nucleotide-dis 98.4 7.4E-07 2.5E-11 89.7 10.8 34 51-84 37-72 (480)
154 2cdu_A NADPH oxidase; flavoenz 98.4 2.9E-07 9.8E-12 92.0 7.6 33 51-83 1-35 (452)
155 1nhp_A NADH peroxidase; oxidor 98.4 3.5E-07 1.2E-11 91.3 7.8 33 51-83 1-35 (447)
156 3hyw_A Sulfide-quinone reducta 98.4 8.3E-08 2.8E-12 95.3 3.1 104 51-210 3-108 (430)
157 2eq6_A Pyruvate dehydrogenase 98.4 1.6E-06 5.3E-11 86.9 12.3 103 50-213 169-273 (464)
158 3fg2_P Putative rubredoxin red 98.4 3.4E-07 1.2E-11 90.1 7.0 33 51-83 2-36 (404)
159 1xhc_A NADH oxidase /nitrite r 98.4 7.4E-07 2.5E-11 86.4 9.3 32 51-83 9-40 (367)
160 2v3a_A Rubredoxin reductase; a 98.4 1.1E-06 3.7E-11 85.8 10.5 99 50-212 145-244 (384)
161 1mo9_A ORF3; nucleotide bindin 98.4 8.5E-07 2.9E-11 90.3 9.6 36 48-83 41-76 (523)
162 2wpf_A Trypanothione reductase 98.4 2.2E-07 7.6E-12 93.9 5.2 33 49-81 6-39 (495)
163 1ges_A Glutathione reductase; 98.4 1.7E-06 5.7E-11 86.4 11.4 99 50-212 167-266 (450)
164 2yqu_A 2-oxoglutarate dehydrog 98.4 1.8E-06 6.1E-11 86.3 11.7 99 50-213 167-266 (455)
165 2gqw_A Ferredoxin reductase; f 98.4 7.4E-07 2.5E-11 87.8 8.3 106 49-212 6-114 (408)
166 3ntd_A FAD-dependent pyridine 98.4 7.7E-07 2.6E-11 91.6 8.7 34 51-84 2-37 (565)
167 1zk7_A HGII, reductase, mercur 98.3 1.3E-07 4.6E-12 94.9 2.6 35 49-83 3-37 (467)
168 1y56_A Hypothetical protein PH 98.3 8.5E-07 2.9E-11 89.5 8.3 113 49-212 107-220 (493)
169 4gde_A UDP-galactopyranose mut 98.3 2.9E-07 9.9E-12 93.4 3.9 36 48-83 8-44 (513)
170 2v3a_A Rubredoxin reductase; a 98.3 9.9E-07 3.4E-11 86.1 7.5 34 50-83 4-39 (384)
171 1v59_A Dihydrolipoamide dehydr 98.3 5.6E-06 1.9E-10 83.2 13.3 106 50-213 183-289 (478)
172 1fec_A Trypanothione reductase 98.3 2.7E-07 9.1E-12 93.2 3.3 33 49-81 2-35 (490)
173 3vrd_B FCCB subunit, flavocyto 98.3 1.7E-06 5.9E-11 84.8 9.0 104 52-212 4-109 (401)
174 1lvl_A Dihydrolipoamide dehydr 98.3 1.4E-07 4.9E-12 94.4 1.0 34 49-82 4-37 (458)
175 2x8g_A Thioredoxin glutathione 98.3 1.2E-06 4.3E-11 90.6 8.1 35 48-82 105-139 (598)
176 1nhp_A NADH peroxidase; oxidor 98.2 7.2E-06 2.5E-10 81.7 12.7 98 50-212 149-247 (447)
177 1m6i_A Programmed cell death p 98.2 1.9E-06 6.6E-11 86.9 8.1 35 49-83 10-46 (493)
178 2r9z_A Glutathione amide reduc 98.2 4E-06 1.4E-10 83.9 10.2 98 51-213 167-266 (463)
179 1ebd_A E3BD, dihydrolipoamide 98.2 8.5E-06 2.9E-10 81.3 12.2 101 50-212 170-271 (455)
180 4eqs_A Coenzyme A disulfide re 98.2 5.3E-06 1.8E-10 82.3 10.3 32 52-83 2-35 (437)
181 3hdq_A UDP-galactopyranose mut 98.2 1.3E-06 4.4E-11 85.1 5.7 37 47-83 26-62 (397)
182 2gag_A Heterotetrameric sarcos 98.2 1.1E-05 3.7E-10 87.9 13.4 34 50-83 128-161 (965)
183 2bcg_G Secretory pathway GDP d 98.1 1.6E-06 5.4E-11 86.6 5.5 35 49-83 10-44 (453)
184 3o0h_A Glutathione reductase; 98.1 1.3E-05 4.3E-10 80.8 12.2 98 50-212 191-289 (484)
185 2e1m_A L-glutamate oxidase; L- 98.1 2.1E-06 7E-11 82.9 5.8 35 48-82 42-76 (376)
186 2b9w_A Putative aminooxidase; 98.1 1.9E-06 6.5E-11 85.2 5.7 35 49-83 5-40 (424)
187 1v0j_A UDP-galactopyranose mut 98.1 1.5E-06 5.2E-11 85.2 4.8 34 50-83 7-41 (399)
188 3ef6_A Toluene 1,2-dioxygenase 98.1 1.3E-05 4.3E-10 78.9 11.2 105 51-219 144-251 (410)
189 3ic9_A Dihydrolipoamide dehydr 98.1 1.2E-06 4.1E-11 88.5 3.6 38 46-83 4-41 (492)
190 1fec_A Trypanothione reductase 98.1 1.5E-05 5.2E-10 80.2 11.8 99 50-212 187-289 (490)
191 2yg5_A Putrescine oxidase; oxi 98.1 1.5E-06 5.1E-11 86.8 4.2 36 48-83 3-38 (453)
192 3lxd_A FAD-dependent pyridine 98.1 1.8E-05 6.1E-10 78.0 11.6 99 50-212 152-252 (415)
193 1rsg_A FMS1 protein; FAD bindi 98.1 1.8E-06 6.3E-11 87.7 4.6 35 49-83 7-42 (516)
194 3fg2_P Putative rubredoxin red 98.1 1.8E-05 6.1E-10 77.7 11.5 106 51-219 143-251 (404)
195 2jae_A L-amino acid oxidase; o 98.1 3E-06 1E-10 85.5 5.7 36 48-83 9-44 (489)
196 3urh_A Dihydrolipoyl dehydroge 98.1 3.1E-05 1.1E-09 78.0 13.2 104 50-213 198-302 (491)
197 2qae_A Lipoamide, dihydrolipoy 98.1 3.6E-05 1.2E-09 77.1 13.4 102 50-212 174-277 (468)
198 4g6h_A Rotenone-insensitive NA 98.1 2.6E-06 8.9E-11 86.0 5.0 36 48-83 40-75 (502)
199 1dxl_A Dihydrolipoamide dehydr 98.0 2.1E-05 7E-10 78.9 11.5 103 50-212 177-280 (470)
200 3cgb_A Pyridine nucleotide-dis 98.0 2.4E-05 8.1E-10 78.6 11.9 96 50-212 186-283 (480)
201 1zmd_A Dihydrolipoyl dehydroge 98.0 3.9E-05 1.3E-09 77.0 13.2 105 50-212 178-283 (474)
202 3iwa_A FAD-dependent pyridine 98.0 2.8E-05 9.5E-10 78.0 12.0 106 50-219 159-268 (472)
203 1onf_A GR, grase, glutathione 98.0 4.1E-05 1.4E-09 77.4 13.3 100 50-213 176-277 (500)
204 1sez_A Protoporphyrinogen oxid 98.0 3.4E-06 1.2E-10 85.4 4.9 35 49-83 12-46 (504)
205 1xdi_A RV3303C-LPDA; reductase 98.0 4E-05 1.4E-09 77.4 12.8 99 50-213 182-281 (499)
206 2wpf_A Trypanothione reductase 98.0 3.4E-05 1.2E-09 77.8 12.1 100 50-213 191-294 (495)
207 1ojt_A Surface protein; redox- 98.0 1.1E-05 3.9E-10 81.1 8.6 103 50-213 185-288 (482)
208 1q1r_A Putidaredoxin reductase 98.0 2.4E-05 8.3E-10 77.4 10.3 106 51-218 150-259 (431)
209 1mo9_A ORF3; nucleotide bindin 98.0 3.3E-05 1.1E-09 78.5 11.5 99 51-213 215-318 (523)
210 3ntd_A FAD-dependent pyridine 98.0 4.3E-05 1.5E-09 78.4 12.3 100 51-212 152-268 (565)
211 1lvl_A Dihydrolipoamide dehydr 98.0 2.1E-05 7.1E-10 78.6 9.6 99 50-213 171-270 (458)
212 3ic9_A Dihydrolipoamide dehydr 98.0 7.6E-05 2.6E-09 75.2 13.7 101 50-212 174-275 (492)
213 1xhc_A NADH oxidase /nitrite r 98.0 2.5E-05 8.4E-10 75.6 9.7 91 51-212 144-235 (367)
214 1trb_A Thioredoxin reductase; 98.0 7.2E-05 2.5E-09 70.6 12.7 100 51-211 146-247 (320)
215 1zk7_A HGII, reductase, mercur 98.0 4.9E-05 1.7E-09 76.1 12.1 97 50-213 176-273 (467)
216 4dsg_A UDP-galactopyranose mut 98.0 6.4E-06 2.2E-10 82.9 5.6 38 46-83 5-43 (484)
217 3dgh_A TRXR-1, thioredoxin red 97.9 0.00012 4.2E-09 73.5 14.9 103 50-212 187-290 (483)
218 2hqm_A GR, grase, glutathione 97.9 3.1E-05 1E-09 77.8 10.4 101 50-213 185-287 (479)
219 2gqw_A Ferredoxin reductase; f 97.9 7.6E-05 2.6E-09 73.3 12.5 102 50-219 145-249 (408)
220 1i8t_A UDP-galactopyranose mut 97.9 5.9E-06 2E-10 80.0 4.3 33 51-83 2-34 (367)
221 2a8x_A Dihydrolipoyl dehydroge 97.9 5.3E-05 1.8E-09 75.8 11.4 101 50-212 171-272 (464)
222 2bc0_A NADH oxidase; flavoprot 97.9 9.6E-05 3.3E-09 74.4 13.3 98 50-212 194-292 (490)
223 2vdc_G Glutamate synthase [NAD 97.9 9.6E-06 3.3E-10 80.8 5.7 36 48-83 120-155 (456)
224 3g5s_A Methylenetetrahydrofola 97.9 1E-05 3.4E-10 77.4 5.2 33 51-83 2-34 (443)
225 2cdu_A NADPH oxidase; flavoenz 97.9 8.8E-05 3E-09 73.9 12.5 98 51-212 150-248 (452)
226 3p1w_A Rabgdi protein; GDI RAB 97.9 1.1E-05 3.8E-10 80.2 5.3 35 49-83 19-53 (475)
227 3lad_A Dihydrolipoamide dehydr 97.9 0.00016 5.6E-09 72.4 14.0 101 50-212 180-281 (476)
228 1kdg_A CDH, cellobiose dehydro 97.8 1.5E-05 5E-10 81.6 6.1 36 48-83 5-40 (546)
229 2iid_A L-amino-acid oxidase; f 97.8 1.1E-05 3.9E-10 81.4 5.1 36 48-83 31-66 (498)
230 3oc4_A Oxidoreductase, pyridin 97.8 0.00014 4.8E-09 72.4 12.9 97 51-212 148-245 (452)
231 2bi7_A UDP-galactopyranose mut 97.8 1.2E-05 4.3E-10 78.2 5.1 34 50-83 3-36 (384)
232 3dgz_A Thioredoxin reductase 2 97.8 0.00026 8.8E-09 71.2 14.9 103 50-212 185-288 (488)
233 1d5t_A Guanine nucleotide diss 97.8 1.7E-05 5.7E-10 78.7 5.6 35 49-83 5-39 (433)
234 3itj_A Thioredoxin reductase 1 97.8 0.00013 4.5E-09 69.2 11.7 96 51-211 174-271 (338)
235 3t37_A Probable dehydrogenase; 97.8 1.1E-05 3.9E-10 82.0 4.1 35 49-83 16-51 (526)
236 4dna_A Probable glutathione re 97.8 0.00014 4.7E-09 72.7 11.6 98 50-212 170-269 (463)
237 3k30_A Histamine dehydrogenase 97.8 2E-05 7E-10 82.8 5.7 36 48-83 389-424 (690)
238 3dk9_A Grase, GR, glutathione 97.7 0.00027 9.2E-09 70.9 12.5 103 50-211 187-293 (478)
239 1o94_A Tmadh, trimethylamine d 97.7 3.2E-05 1.1E-09 81.8 5.5 36 48-83 387-422 (729)
240 1m6i_A Programmed cell death p 97.7 0.00019 6.6E-09 72.2 11.0 104 51-218 181-291 (493)
241 1fl2_A Alkyl hydroperoxide red 97.7 0.00036 1.2E-08 65.4 12.3 95 51-211 145-242 (310)
242 3ics_A Coenzyme A-disulfide re 97.6 0.00016 5.3E-09 74.6 10.1 95 51-212 188-283 (588)
243 3kd9_A Coenzyme A disulfide re 97.6 0.00037 1.3E-08 69.3 12.4 96 51-212 149-245 (449)
244 4eqs_A Coenzyme A disulfide re 97.6 0.00026 8.7E-09 70.1 11.0 92 51-211 148-240 (437)
245 1b37_A Protein (polyamine oxid 97.6 4E-05 1.4E-09 76.8 5.2 35 49-83 3-38 (472)
246 4b1b_A TRXR, thioredoxin reduc 97.6 0.00031 1.1E-08 71.2 11.6 102 47-214 220-322 (542)
247 1ps9_A 2,4-dienoyl-COA reducta 97.6 4.4E-05 1.5E-09 80.0 5.3 36 48-83 371-406 (671)
248 3q9t_A Choline dehydrogenase a 97.6 3.5E-05 1.2E-09 78.8 4.4 37 48-84 4-41 (577)
249 2z3y_A Lysine-specific histone 97.6 5.7E-05 1.9E-09 79.0 6.0 36 48-83 105-140 (662)
250 1ju2_A HydroxynitrIle lyase; f 97.6 2.8E-05 9.7E-10 79.1 3.4 34 49-83 25-58 (536)
251 3ab1_A Ferredoxin--NADP reduct 97.6 0.0002 6.7E-09 68.9 9.2 99 51-211 164-263 (360)
252 3cty_A Thioredoxin reductase; 97.6 0.00046 1.6E-08 65.0 11.6 96 51-211 156-252 (319)
253 1gpe_A Protein (glucose oxidas 97.6 6.2E-05 2.1E-09 77.4 5.8 37 47-83 21-58 (587)
254 2q0l_A TRXR, thioredoxin reduc 97.6 0.00058 2E-08 64.0 11.9 96 51-211 144-241 (311)
255 2zbw_A Thioredoxin reductase; 97.5 0.00042 1.4E-08 65.7 11.0 99 51-211 153-252 (335)
256 2xag_A Lysine-specific histone 97.5 7.3E-05 2.5E-09 79.7 6.0 35 49-83 277-311 (852)
257 3qvp_A Glucose oxidase; oxidor 97.5 5.7E-05 1.9E-09 77.3 4.6 37 47-83 16-53 (583)
258 1lqt_A FPRA; NADP+ derivative, 97.5 5.6E-05 1.9E-09 75.3 3.9 34 50-83 3-43 (456)
259 3s5w_A L-ornithine 5-monooxyge 97.5 0.00014 4.9E-09 72.5 7.0 143 50-211 227-377 (463)
260 3lzw_A Ferredoxin--NADP reduct 97.5 0.00073 2.5E-08 63.8 11.6 95 51-211 155-250 (332)
261 1cjc_A Protein (adrenodoxin re 97.5 7.1E-05 2.4E-09 74.6 4.5 35 49-83 5-41 (460)
262 3qfa_A Thioredoxin reductase 1 97.5 0.0014 4.6E-08 66.4 14.0 104 50-211 210-315 (519)
263 1vdc_A NTR, NADPH dependent th 97.4 0.00062 2.1E-08 64.4 10.8 96 51-211 160-259 (333)
264 3fbs_A Oxidoreductase; structu 97.4 0.00038 1.3E-08 64.6 9.0 85 50-210 141-225 (297)
265 2q7v_A Thioredoxin reductase; 97.4 0.0011 3.7E-08 62.6 12.2 95 51-211 153-249 (325)
266 3d1c_A Flavin-containing putat 97.4 0.00051 1.8E-08 66.0 10.0 104 51-212 167-273 (369)
267 1gte_A Dihydropyrimidine dehyd 97.4 9.2E-05 3.2E-09 81.2 5.2 34 50-83 187-221 (1025)
268 2jbv_A Choline oxidase; alcoho 97.4 9.3E-05 3.2E-09 75.5 4.6 38 46-83 9-47 (546)
269 1coy_A Cholesterol oxidase; ox 97.4 0.00014 4.8E-09 73.5 5.9 36 48-83 9-44 (507)
270 3ayj_A Pro-enzyme of L-phenyla 97.4 7.2E-05 2.5E-09 77.8 3.8 36 48-83 54-97 (721)
271 1n4w_A CHOD, cholesterol oxida 97.4 0.00011 3.9E-09 74.1 5.0 35 49-83 4-38 (504)
272 3fim_B ARYL-alcohol oxidase; A 97.4 6.5E-05 2.2E-09 76.7 3.1 34 50-83 2-36 (566)
273 2a87_A TRXR, TR, thioredoxin r 97.4 0.00091 3.1E-08 63.5 10.7 96 51-211 156-252 (335)
274 3r9u_A Thioredoxin reductase; 97.3 0.00074 2.5E-08 63.2 9.8 95 51-210 148-243 (315)
275 3klj_A NAD(FAD)-dependent dehy 97.3 0.0002 6.9E-09 69.6 5.9 85 51-212 147-232 (385)
276 3f8d_A Thioredoxin reductase ( 97.3 0.0013 4.5E-08 61.6 10.6 95 51-211 155-251 (323)
277 3l8k_A Dihydrolipoyl dehydroge 97.3 0.001 3.6E-08 66.3 10.4 101 50-212 172-273 (466)
278 2x8g_A Thioredoxin glutathione 97.3 0.0033 1.1E-07 64.8 14.3 103 51-212 287-396 (598)
279 3k30_A Histamine dehydrogenase 97.2 0.0019 6.6E-08 67.7 12.0 97 51-210 524-623 (690)
280 1hyu_A AHPF, alkyl hydroperoxi 97.2 0.002 6.9E-08 65.2 11.7 94 51-210 356-452 (521)
281 4g6h_A Rotenone-insensitive NA 97.1 0.0018 6.1E-08 65.2 10.3 98 52-210 219-331 (502)
282 1vg0_A RAB proteins geranylger 97.1 0.00048 1.6E-08 70.7 5.5 36 48-83 6-41 (650)
283 3gwf_A Cyclohexanone monooxyge 96.7 0.00027 9.1E-09 71.9 -0.2 35 50-84 178-212 (540)
284 3uox_A Otemo; baeyer-villiger 96.6 0.00042 1.4E-08 70.5 1.0 35 50-84 185-219 (545)
285 2xve_A Flavin-containing monoo 96.6 0.0061 2.1E-07 60.7 9.3 34 50-83 197-230 (464)
286 2gv8_A Monooxygenase; FMO, FAD 96.5 0.0034 1.2E-07 62.2 6.4 33 51-83 213-246 (447)
287 2gag_A Heterotetrameric sarcos 96.5 0.0064 2.2E-07 66.2 9.1 98 51-212 285-384 (965)
288 1cjc_A Protein (adrenodoxin re 96.4 0.0086 2.9E-07 59.5 9.1 34 50-83 145-199 (460)
289 4a5l_A Thioredoxin reductase; 96.4 0.02 6.8E-07 53.3 10.9 33 51-83 153-185 (314)
290 3fwz_A Inner membrane protein 96.4 0.0038 1.3E-07 50.9 5.1 35 49-83 6-40 (140)
291 2g1u_A Hypothetical protein TM 96.4 0.004 1.4E-07 51.8 5.2 34 50-83 19-52 (155)
292 1lss_A TRK system potassium up 96.3 0.0043 1.5E-07 50.3 5.0 33 51-83 5-37 (140)
293 1o94_A Tmadh, trimethylamine d 96.2 0.013 4.6E-07 61.7 9.8 33 51-83 529-563 (729)
294 1lqt_A FPRA; NADP+ derivative, 96.2 0.013 4.4E-07 58.1 9.0 34 50-83 147-201 (456)
295 3ic5_A Putative saccharopine d 96.1 0.006 2E-07 47.7 4.8 34 50-83 5-39 (118)
296 1pzg_A LDH, lactate dehydrogen 96.1 0.0056 1.9E-07 57.9 5.3 40 44-83 3-43 (331)
297 3llv_A Exopolyphosphatase-rela 96.1 0.0059 2E-07 49.8 4.6 33 51-83 7-39 (141)
298 2vdc_G Glutamate synthase [NAD 95.9 0.016 5.4E-07 57.4 7.9 34 50-83 264-298 (456)
299 1id1_A Putative potassium chan 95.8 0.012 4E-07 48.8 5.5 33 51-83 4-36 (153)
300 1f0y_A HCDH, L-3-hydroxyacyl-C 95.8 0.0098 3.4E-07 55.5 5.6 33 51-83 16-48 (302)
301 1ps9_A 2,4-dienoyl-COA reducta 95.8 0.047 1.6E-06 57.0 11.1 52 146-211 576-628 (671)
302 3pid_A UDP-glucose 6-dehydroge 95.7 0.0085 2.9E-07 58.5 4.9 57 26-83 12-68 (432)
303 2hmt_A YUAA protein; RCK, KTN, 95.7 0.01 3.4E-07 48.2 4.5 32 52-83 8-39 (144)
304 1gte_A Dihydropyrimidine dehyd 95.7 0.04 1.4E-06 60.4 10.4 32 52-83 334-366 (1025)
305 3i83_A 2-dehydropantoate 2-red 95.6 0.011 3.7E-07 55.7 5.1 34 50-83 2-35 (320)
306 3l4b_C TRKA K+ channel protien 95.5 0.0093 3.2E-07 52.6 4.2 32 52-83 2-33 (218)
307 4a9w_A Monooxygenase; baeyer-v 95.4 0.042 1.4E-06 52.0 8.4 32 51-83 164-195 (357)
308 3hn2_A 2-dehydropantoate 2-red 95.4 0.013 4.6E-07 54.8 4.8 34 50-83 2-35 (312)
309 3k96_A Glycerol-3-phosphate de 95.3 0.017 5.9E-07 55.1 5.3 39 45-83 24-62 (356)
310 4gcm_A TRXR, thioredoxin reduc 95.3 0.012 4.2E-07 54.9 4.2 33 51-83 146-178 (312)
311 3sx6_A Sulfide-quinone reducta 95.2 0.12 4.2E-06 50.6 11.6 56 146-209 211-267 (437)
312 3h28_A Sulfide-quinone reducta 95.2 0.07 2.4E-06 52.3 9.7 53 145-210 202-255 (430)
313 3c85_A Putative glutathione-re 95.2 0.019 6.4E-07 49.0 4.9 34 50-83 39-73 (183)
314 3ado_A Lambda-crystallin; L-gu 95.0 0.019 6.5E-07 53.7 4.5 33 51-83 7-39 (319)
315 3g17_A Similar to 2-dehydropan 94.9 0.017 5.9E-07 53.6 3.9 34 50-83 2-35 (294)
316 3gg2_A Sugar dehydrogenase, UD 94.9 0.024 8.3E-07 55.9 5.1 33 51-83 3-35 (450)
317 4e12_A Diketoreductase; oxidor 94.8 0.031 1.1E-06 51.4 5.5 32 52-83 6-37 (283)
318 1b37_A Protein (polyamine oxid 94.8 0.5 1.7E-05 46.7 14.7 39 321-362 423-461 (472)
319 2dpo_A L-gulonate 3-dehydrogen 94.8 0.022 7.7E-07 53.4 4.5 33 51-83 7-39 (319)
320 1z82_A Glycerol-3-phosphate de 94.6 0.031 1.1E-06 52.9 5.1 36 48-83 12-47 (335)
321 4g65_A TRK system potassium up 94.6 0.012 4.2E-07 58.3 2.3 54 50-103 3-66 (461)
322 1ks9_A KPA reductase;, 2-dehyd 94.6 0.032 1.1E-06 51.3 5.1 32 52-83 2-33 (291)
323 3h8l_A NADH oxidase; membrane 94.6 0.14 4.8E-06 49.7 9.9 50 145-211 220-270 (409)
324 2qyt_A 2-dehydropantoate 2-red 94.6 0.021 7.1E-07 53.5 3.7 36 46-81 4-45 (317)
325 2ew2_A 2-dehydropantoate 2-red 94.6 0.032 1.1E-06 52.0 5.0 33 51-83 4-36 (316)
326 3g0o_A 3-hydroxyisobutyrate de 94.5 0.036 1.2E-06 51.6 5.1 35 49-83 6-40 (303)
327 3dfu_A Uncharacterized protein 94.5 0.014 4.7E-07 51.9 2.0 35 47-81 3-37 (232)
328 3ego_A Probable 2-dehydropanto 94.4 0.035 1.2E-06 51.8 4.9 33 50-83 2-34 (307)
329 1lld_A L-lactate dehydrogenase 94.4 0.037 1.3E-06 51.9 5.1 33 51-83 8-42 (319)
330 3qha_A Putative oxidoreductase 94.4 0.029 1E-06 52.0 4.3 35 50-84 15-49 (296)
331 2raf_A Putative dinucleotide-b 94.4 0.044 1.5E-06 47.9 5.1 35 50-84 19-53 (209)
332 2y0c_A BCEC, UDP-glucose dehyd 94.3 0.039 1.3E-06 54.9 5.1 34 50-83 8-41 (478)
333 2hjr_A Malate dehydrogenase; m 94.3 0.046 1.6E-06 51.5 5.4 34 50-83 14-48 (328)
334 3c24_A Putative oxidoreductase 94.1 0.055 1.9E-06 49.8 5.5 38 46-83 7-45 (286)
335 4dio_A NAD(P) transhydrogenase 94.1 0.052 1.8E-06 52.3 5.4 34 50-83 190-223 (405)
336 3ghy_A Ketopantoate reductase 94.1 0.05 1.7E-06 51.4 5.2 32 51-82 4-35 (335)
337 4b63_A L-ornithine N5 monooxyg 94.0 0.46 1.6E-05 47.4 12.4 33 51-83 247-281 (501)
338 4ezb_A Uncharacterized conserv 94.0 0.029 9.9E-07 52.6 3.3 36 48-83 22-58 (317)
339 1y6j_A L-lactate dehydrogenase 94.0 0.055 1.9E-06 50.7 5.1 35 49-83 6-42 (318)
340 2ewd_A Lactate dehydrogenase,; 93.9 0.054 1.9E-06 50.7 4.9 34 50-83 4-38 (317)
341 1evy_A Glycerol-3-phosphate de 93.9 0.038 1.3E-06 52.9 4.0 32 52-83 17-48 (366)
342 3lk7_A UDP-N-acetylmuramoylala 93.8 0.059 2E-06 53.2 5.4 34 50-83 9-42 (451)
343 3dfz_A SIRC, precorrin-2 dehyd 93.8 0.055 1.9E-06 47.7 4.6 34 49-82 30-63 (223)
344 1ur5_A Malate dehydrogenase; o 93.8 0.063 2.2E-06 50.1 5.2 33 51-83 3-36 (309)
345 3tl2_A Malate dehydrogenase; c 93.7 0.072 2.4E-06 49.7 5.4 33 50-82 8-41 (315)
346 2v6b_A L-LDH, L-lactate dehydr 93.7 0.064 2.2E-06 49.9 5.0 32 52-83 2-35 (304)
347 3doj_A AT3G25530, dehydrogenas 93.6 0.073 2.5E-06 49.7 5.4 33 51-83 22-54 (310)
348 3l9w_A Glutathione-regulated p 93.6 0.055 1.9E-06 52.7 4.6 33 51-83 5-37 (413)
349 2x5o_A UDP-N-acetylmuramoylala 93.6 0.049 1.7E-06 53.6 4.2 33 51-83 6-38 (439)
350 2vns_A Metalloreductase steap3 93.6 0.076 2.6E-06 46.6 5.1 33 51-83 29-61 (215)
351 3ggo_A Prephenate dehydrogenas 93.5 0.088 3E-06 49.2 5.6 36 48-83 31-68 (314)
352 3g79_A NDP-N-acetyl-D-galactos 93.5 0.064 2.2E-06 53.1 4.8 34 51-84 19-54 (478)
353 3pqe_A L-LDH, L-lactate dehydr 93.4 0.07 2.4E-06 50.1 4.8 35 49-83 4-40 (326)
354 2uyy_A N-PAC protein; long-cha 93.4 0.096 3.3E-06 48.9 5.8 34 50-83 30-63 (316)
355 4huj_A Uncharacterized protein 93.4 0.046 1.6E-06 48.2 3.4 33 51-83 24-57 (220)
356 1kyq_A Met8P, siroheme biosynt 93.4 0.037 1.3E-06 50.4 2.7 34 50-83 13-46 (274)
357 3p2y_A Alanine dehydrogenase/p 93.3 0.061 2.1E-06 51.3 4.3 34 50-83 184-217 (381)
358 3hwr_A 2-dehydropantoate 2-red 93.3 0.075 2.6E-06 49.8 4.9 34 49-83 18-51 (318)
359 1t2d_A LDH-P, L-lactate dehydr 93.3 0.095 3.3E-06 49.1 5.5 33 51-83 5-38 (322)
360 1bg6_A N-(1-D-carboxylethyl)-L 93.3 0.079 2.7E-06 50.4 5.1 33 51-83 5-37 (359)
361 4a7p_A UDP-glucose dehydrogena 93.3 0.081 2.8E-06 51.9 5.2 35 50-84 8-42 (446)
362 1mv8_A GMD, GDP-mannose 6-dehy 93.3 0.068 2.3E-06 52.5 4.7 32 52-83 2-33 (436)
363 3pef_A 6-phosphogluconate dehy 93.3 0.079 2.7E-06 48.8 4.9 33 51-83 2-34 (287)
364 3dtt_A NADP oxidoreductase; st 93.3 0.089 3E-06 47.2 5.1 35 49-83 18-52 (245)
365 2pv7_A T-protein [includes: ch 93.3 0.11 3.8E-06 48.1 5.9 33 51-83 22-55 (298)
366 3vtf_A UDP-glucose 6-dehydroge 93.2 0.097 3.3E-06 51.1 5.6 34 50-83 21-54 (444)
367 4fk1_A Putative thioredoxin re 93.1 0.28 9.4E-06 45.3 8.5 33 51-83 147-180 (304)
368 1vpd_A Tartronate semialdehyde 93.1 0.082 2.8E-06 48.9 4.7 34 50-83 5-38 (299)
369 1guz_A Malate dehydrogenase; o 93.1 0.092 3.2E-06 49.0 5.0 32 52-83 2-35 (310)
370 1zej_A HBD-9, 3-hydroxyacyl-CO 93.0 0.095 3.2E-06 48.3 4.9 33 50-83 12-44 (293)
371 3k6j_A Protein F01G10.3, confi 93.0 0.088 3E-06 51.7 4.9 33 52-84 56-88 (460)
372 4dll_A 2-hydroxy-3-oxopropiona 93.0 0.099 3.4E-06 49.0 5.1 34 50-83 31-64 (320)
373 3oj0_A Glutr, glutamyl-tRNA re 92.9 0.037 1.3E-06 45.1 1.9 34 50-83 21-54 (144)
374 3qsg_A NAD-binding phosphogluc 92.9 0.078 2.7E-06 49.5 4.2 33 50-82 24-57 (312)
375 1jw9_B Molybdopterin biosynthe 92.8 0.083 2.8E-06 47.6 4.2 33 51-83 32-65 (249)
376 1x13_A NAD(P) transhydrogenase 92.7 0.094 3.2E-06 50.8 4.7 34 50-83 172-205 (401)
377 1zcj_A Peroxisomal bifunctiona 92.7 0.093 3.2E-06 52.0 4.8 32 52-83 39-70 (463)
378 2p4q_A 6-phosphogluconate dehy 92.7 0.12 4E-06 51.6 5.4 36 48-83 8-43 (497)
379 3l6d_A Putative oxidoreductase 92.6 0.14 4.9E-06 47.6 5.7 34 50-83 9-42 (306)
380 1txg_A Glycerol-3-phosphate de 92.6 0.085 2.9E-06 49.7 4.1 30 52-81 2-31 (335)
381 1l7d_A Nicotinamide nucleotide 92.5 0.12 4E-06 49.9 5.0 34 50-83 172-205 (384)
382 3eag_A UDP-N-acetylmuramate:L- 92.5 0.12 4.2E-06 48.5 5.1 33 51-83 5-38 (326)
383 3gt0_A Pyrroline-5-carboxylate 92.4 0.15 5E-06 45.8 5.4 33 51-83 3-39 (247)
384 3mog_A Probable 3-hydroxybutyr 92.4 0.13 4.6E-06 51.0 5.4 32 52-83 7-38 (483)
385 3gvi_A Malate dehydrogenase; N 92.4 0.14 4.9E-06 47.9 5.3 33 51-83 8-41 (324)
386 3pdu_A 3-hydroxyisobutyrate de 92.3 0.091 3.1E-06 48.4 3.9 32 52-83 3-34 (287)
387 1pjc_A Protein (L-alanine dehy 92.3 0.13 4.3E-06 49.2 4.9 33 51-83 168-200 (361)
388 1jay_A Coenzyme F420H2:NADP+ o 92.2 0.13 4.6E-06 44.7 4.7 32 52-83 2-34 (212)
389 3c7a_A Octopine dehydrogenase; 92.2 0.081 2.8E-06 51.4 3.5 30 51-80 3-33 (404)
390 2f1k_A Prephenate dehydrogenas 92.2 0.14 4.9E-06 46.7 5.0 32 52-83 2-33 (279)
391 3ius_A Uncharacterized conserv 92.2 0.1 3.6E-06 47.7 4.1 34 50-83 5-38 (286)
392 1oju_A MDH, malate dehydrogena 92.1 0.11 3.9E-06 47.9 4.2 33 51-83 1-35 (294)
393 2a9f_A Putative malic enzyme ( 92.1 0.12 4.2E-06 49.2 4.5 35 49-83 187-222 (398)
394 2h78_A Hibadh, 3-hydroxyisobut 92.1 0.14 4.6E-06 47.5 4.8 33 51-83 4-36 (302)
395 1a5z_A L-lactate dehydrogenase 92.0 0.12 4E-06 48.5 4.3 32 52-83 2-35 (319)
396 1yj8_A Glycerol-3-phosphate de 91.9 0.11 3.6E-06 50.0 4.0 34 51-84 22-62 (375)
397 1dlj_A UDP-glucose dehydrogena 91.9 0.11 3.8E-06 50.4 4.1 31 52-83 2-32 (402)
398 3ktd_A Prephenate dehydrogenas 91.9 0.19 6.5E-06 47.4 5.6 34 50-83 8-41 (341)
399 2q3e_A UDP-glucose 6-dehydroge 91.9 0.13 4.4E-06 51.0 4.6 33 51-83 6-40 (467)
400 2izz_A Pyrroline-5-carboxylate 91.9 0.16 5.4E-06 47.7 5.0 33 51-83 23-59 (322)
401 2gf2_A Hibadh, 3-hydroxyisobut 91.9 0.16 5.4E-06 46.9 4.9 32 52-83 2-33 (296)
402 4gx0_A TRKA domain protein; me 91.8 0.15 5.1E-06 51.9 5.2 35 51-85 349-383 (565)
403 4ap3_A Steroid monooxygenase; 91.8 0.11 3.6E-06 52.8 4.0 35 50-84 191-225 (549)
404 4gwg_A 6-phosphogluconate dehy 91.8 0.18 6.2E-06 49.9 5.5 33 51-83 5-37 (484)
405 4e21_A 6-phosphogluconate dehy 91.8 0.17 5.8E-06 48.1 5.1 33 51-83 23-55 (358)
406 3nep_X Malate dehydrogenase; h 91.7 0.14 4.9E-06 47.7 4.4 33 51-83 1-35 (314)
407 4gbj_A 6-phosphogluconate dehy 91.6 0.13 4.5E-06 47.6 4.1 36 49-84 4-39 (297)
408 2o3j_A UDP-glucose 6-dehydroge 91.6 0.16 5.4E-06 50.6 4.9 33 51-83 10-44 (481)
409 3p7m_A Malate dehydrogenase; p 91.6 0.2 6.9E-06 46.8 5.3 33 51-83 6-39 (321)
410 4ffl_A PYLC; amino acid, biosy 91.6 0.17 5.9E-06 48.2 5.0 32 52-83 3-34 (363)
411 1y56_A Hypothetical protein PH 91.6 0.28 9.6E-06 48.9 6.7 49 151-212 265-314 (493)
412 3cky_A 2-hydroxymethyl glutara 91.5 0.17 5.8E-06 46.8 4.8 33 51-83 5-37 (301)
413 1yqg_A Pyrroline-5-carboxylate 91.5 0.15 5.2E-06 46.1 4.3 32 52-83 2-34 (263)
414 2eez_A Alanine dehydrogenase; 91.3 0.19 6.3E-06 48.2 4.9 33 51-83 167-199 (369)
415 3ew7_A LMO0794 protein; Q8Y8U8 91.3 0.22 7.5E-06 43.3 5.1 32 52-83 2-34 (221)
416 2pgd_A 6-phosphogluconate dehy 91.3 0.2 7E-06 49.8 5.3 33 51-83 3-35 (482)
417 2z3y_A Lysine-specific histone 91.2 3.6 0.00012 42.5 15.0 36 321-359 623-658 (662)
418 1kjq_A GART 2, phosphoribosylg 91.2 0.25 8.5E-06 47.6 5.8 39 45-83 6-44 (391)
419 1ldn_A L-lactate dehydrogenase 91.2 0.21 7.2E-06 46.6 5.1 34 50-83 6-41 (316)
420 1vl6_A Malate oxidoreductase; 91.1 0.18 6.2E-06 47.9 4.5 34 49-82 191-225 (388)
421 2rcy_A Pyrroline carboxylate r 91.1 0.18 6.3E-06 45.5 4.5 34 51-84 5-42 (262)
422 2aef_A Calcium-gated potassium 91.1 0.08 2.7E-06 47.0 2.0 33 50-83 9-41 (234)
423 3ldh_A Lactate dehydrogenase; 91.0 0.27 9.3E-06 46.0 5.6 34 50-83 21-56 (330)
424 2cvz_A Dehydrogenase, 3-hydrox 90.9 0.19 6.6E-06 46.0 4.5 31 52-83 3-33 (289)
425 4b4o_A Epimerase family protei 90.9 0.23 7.9E-06 45.7 5.1 33 51-83 1-34 (298)
426 3tri_A Pyrroline-5-carboxylate 90.9 0.27 9.2E-06 45.0 5.4 33 51-83 4-39 (280)
427 1pgj_A 6PGDH, 6-PGDH, 6-phosph 90.9 0.22 7.4E-06 49.5 5.1 33 51-83 2-34 (478)
428 1hyh_A L-hicdh, L-2-hydroxyiso 90.9 0.18 6E-06 47.0 4.2 33 51-83 2-36 (309)
429 2vhw_A Alanine dehydrogenase; 90.8 0.22 7.6E-06 47.8 4.9 34 50-83 168-201 (377)
430 1b8p_A Protein (malate dehydro 90.8 0.17 6E-06 47.5 4.1 34 49-82 4-45 (329)
431 2g5c_A Prephenate dehydrogenas 90.7 0.24 8.3E-06 45.2 5.0 32 52-83 3-36 (281)
432 3h2s_A Putative NADH-flavin re 90.7 0.26 8.8E-06 43.0 5.0 32 52-83 2-34 (224)
433 1x0v_A GPD-C, GPDH-C, glycerol 90.7 0.14 4.7E-06 48.7 3.3 34 51-84 9-49 (354)
434 2zyd_A 6-phosphogluconate dehy 90.7 0.23 7.8E-06 49.3 5.0 33 51-83 16-48 (480)
435 3d0o_A L-LDH 1, L-lactate dehy 90.6 0.23 7.8E-06 46.4 4.7 34 50-83 6-41 (317)
436 2iz1_A 6-phosphogluconate dehy 90.6 0.27 9.3E-06 48.7 5.5 33 51-83 6-38 (474)
437 3dhn_A NAD-dependent epimerase 90.6 0.23 7.9E-06 43.5 4.5 33 51-83 5-38 (227)
438 3e8x_A Putative NAD-dependent 90.5 0.27 9.1E-06 43.5 4.9 34 50-83 21-55 (236)
439 2r6j_A Eugenol synthase 1; phe 90.4 0.26 8.9E-06 45.8 5.0 33 51-83 12-45 (318)
440 3gpi_A NAD-dependent epimerase 90.4 0.32 1.1E-05 44.4 5.5 34 51-84 4-37 (286)
441 1nyt_A Shikimate 5-dehydrogena 90.4 0.27 9.3E-06 44.7 4.9 33 51-83 120-152 (271)
442 4aj2_A L-lactate dehydrogenase 90.3 0.36 1.2E-05 45.2 5.8 34 50-83 19-54 (331)
443 3vku_A L-LDH, L-lactate dehydr 90.3 0.26 8.9E-06 46.1 4.7 34 50-83 9-44 (326)
444 4e4t_A Phosphoribosylaminoimid 90.2 0.37 1.3E-05 46.9 6.0 33 51-83 36-68 (419)
445 2ahr_A Putative pyrroline carb 90.2 0.24 8.1E-06 44.7 4.3 33 51-83 4-36 (259)
446 2wtb_A MFP2, fatty acid multif 90.1 0.24 8.1E-06 51.9 4.8 32 52-83 314-345 (725)
447 2i6t_A Ubiquitin-conjugating e 90.0 0.24 8.3E-06 45.9 4.3 33 51-83 15-49 (303)
448 1hdo_A Biliverdin IX beta redu 90.0 0.36 1.2E-05 41.3 5.2 33 51-83 4-37 (206)
449 3d1l_A Putative NADP oxidoredu 90.0 0.25 8.7E-06 44.7 4.4 33 51-83 11-44 (266)
450 1np3_A Ketol-acid reductoisome 90.0 0.32 1.1E-05 45.8 5.2 33 51-83 17-49 (338)
451 3phh_A Shikimate dehydrogenase 90.0 0.33 1.1E-05 44.0 5.0 35 50-84 118-152 (269)
452 1i36_A Conserved hypothetical 89.9 0.25 8.5E-06 44.7 4.2 30 52-81 2-31 (264)
453 2egg_A AROE, shikimate 5-dehyd 89.8 0.3 1E-05 45.2 4.7 33 51-83 142-175 (297)
454 1pjq_A CYSG, siroheme synthase 89.7 0.28 9.5E-06 48.4 4.7 33 50-82 12-44 (457)
455 3abi_A Putative uncharacterize 89.7 0.25 8.5E-06 47.2 4.2 40 43-83 9-48 (365)
456 3rui_A Ubiquitin-like modifier 89.6 0.36 1.2E-05 45.2 5.1 34 50-83 34-68 (340)
457 1zud_1 Adenylyltransferase THI 89.6 0.34 1.2E-05 43.5 4.8 33 51-83 29-62 (251)
458 2dwc_A PH0318, 433AA long hypo 89.6 0.44 1.5E-05 46.5 6.0 38 46-83 15-52 (433)
459 1yb4_A Tartronic semialdehyde 89.5 0.21 7.2E-06 45.9 3.5 32 51-83 4-35 (295)
460 3orq_A N5-carboxyaminoimidazol 89.5 0.56 1.9E-05 44.9 6.5 34 50-83 12-45 (377)
461 3oec_A Carveol dehydrogenase ( 89.5 0.42 1.4E-05 44.6 5.5 40 44-83 39-80 (317)
462 3ojo_A CAP5O; rossmann fold, c 89.4 0.31 1.1E-05 47.5 4.6 33 51-83 12-44 (431)
463 1wdk_A Fatty oxidation complex 89.3 0.3 1E-05 51.1 4.7 32 52-83 316-347 (715)
464 3h8v_A Ubiquitin-like modifier 89.2 0.3 1E-05 44.9 4.1 34 50-83 36-70 (292)
465 3ond_A Adenosylhomocysteinase; 89.1 0.37 1.3E-05 47.4 4.9 33 51-83 266-298 (488)
466 3vps_A TUNA, NAD-dependent epi 89.0 0.43 1.5E-05 44.1 5.3 35 50-84 7-42 (321)
467 2hk9_A Shikimate dehydrogenase 88.9 0.33 1.1E-05 44.2 4.3 33 51-83 130-162 (275)
468 1mld_A Malate dehydrogenase; o 88.8 0.36 1.2E-05 45.0 4.5 33 51-83 1-36 (314)
469 3q2o_A Phosphoribosylaminoimid 88.8 0.59 2E-05 44.9 6.2 33 51-83 15-47 (389)
470 2rir_A Dipicolinate synthase, 88.8 0.46 1.6E-05 43.9 5.2 34 50-83 157-190 (300)
471 4id9_A Short-chain dehydrogena 88.7 0.43 1.5E-05 44.9 5.1 36 49-84 18-54 (347)
472 1smk_A Malate dehydrogenase, g 88.7 0.33 1.1E-05 45.6 4.2 34 50-83 8-44 (326)
473 3fi9_A Malate dehydrogenase; s 88.7 0.49 1.7E-05 44.5 5.4 33 51-83 9-44 (343)
474 3d4o_A Dipicolinate synthase s 88.7 0.42 1.4E-05 44.0 4.9 34 50-83 155-188 (293)
475 2we8_A Xanthine dehydrogenase; 88.6 0.56 1.9E-05 44.9 5.7 35 50-84 204-238 (386)
476 1ez4_A Lactate dehydrogenase; 88.5 0.4 1.4E-05 44.8 4.6 34 50-83 5-40 (318)
477 3gvp_A Adenosylhomocysteinase 88.5 0.37 1.2E-05 46.6 4.4 33 51-83 221-253 (435)
478 3k5i_A Phosphoribosyl-aminoimi 88.5 0.37 1.3E-05 46.7 4.5 33 50-83 24-56 (403)
479 3ce6_A Adenosylhomocysteinase; 88.5 0.35 1.2E-05 47.9 4.4 33 51-83 275-307 (494)
480 3r6d_A NAD-dependent epimerase 88.4 0.6 2.1E-05 40.6 5.5 32 52-83 7-40 (221)
481 2yg5_A Putrescine oxidase; oxi 88.4 8.5 0.00029 37.3 14.6 36 320-358 415-450 (453)
482 1p77_A Shikimate 5-dehydrogena 88.4 0.36 1.2E-05 44.0 4.1 33 51-83 120-152 (272)
483 2zqz_A L-LDH, L-lactate dehydr 88.4 0.45 1.5E-05 44.6 4.9 34 50-83 9-44 (326)
484 2jae_A L-amino acid oxidase; o 88.4 8.4 0.00029 37.8 14.6 38 320-361 450-487 (489)
485 3don_A Shikimate dehydrogenase 88.3 0.37 1.3E-05 44.0 4.1 34 50-83 117-151 (277)
486 2yjz_A Metalloreductase steap4 88.0 0.092 3.1E-06 45.6 0.0 34 50-83 19-52 (201)
487 2d4a_B Malate dehydrogenase; a 88.1 0.41 1.4E-05 44.4 4.4 32 52-83 1-33 (308)
488 3u62_A Shikimate dehydrogenase 88.1 0.54 1.8E-05 42.2 5.0 32 52-83 110-142 (253)
489 2d5c_A AROE, shikimate 5-dehyd 88.0 0.53 1.8E-05 42.5 5.0 32 52-83 118-149 (263)
490 2ydy_A Methionine adenosyltran 87.6 0.49 1.7E-05 43.8 4.6 33 51-83 3-36 (315)
491 3zwc_A Peroxisomal bifunctiona 87.5 0.45 1.6E-05 49.7 4.7 32 52-83 318-349 (742)
492 2pzm_A Putative nucleotide sug 87.4 0.6 2.1E-05 43.6 5.1 33 51-83 21-54 (330)
493 2x0j_A Malate dehydrogenase; o 87.3 0.48 1.6E-05 43.6 4.2 33 51-83 1-35 (294)
494 2c5a_A GDP-mannose-3', 5'-epim 87.2 0.88 3E-05 43.4 6.3 35 49-83 28-63 (379)
495 3m2p_A UDP-N-acetylglucosamine 87.2 0.62 2.1E-05 43.0 5.1 33 51-83 3-36 (311)
496 3h5n_A MCCB protein; ubiquitin 87.1 0.49 1.7E-05 44.8 4.4 34 50-83 118-152 (353)
497 2qrj_A Saccharopine dehydrogen 87.1 0.48 1.6E-05 45.3 4.2 34 50-83 214-251 (394)
498 3jyo_A Quinate/shikimate dehyd 86.9 0.65 2.2E-05 42.5 4.9 34 50-83 127-161 (283)
499 3tnl_A Shikimate dehydrogenase 86.8 0.64 2.2E-05 43.2 4.8 33 50-82 154-187 (315)
500 1y7t_A Malate dehydrogenase; N 86.8 0.49 1.7E-05 44.3 4.1 34 50-83 4-45 (327)
No 1
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=4.8e-42 Score=339.94 Aligned_cols=368 Identities=21% Similarity=0.268 Sum_probs=260.8
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCC--CCCCcccccCccccccCCCCh--hhHhcccceEEEEcCCCce-
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD--NCKPCGGAIPLCMVGEFDLPL--DIIDRKVTKMKMISPSNVA- 124 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~--~~~~~g~~i~~~~l~~~g~~~--~~~~~~~~~~~~~~~~~~~- 124 (462)
+|||+|||||||||++|+.|+++|++|+||||++. ....||++++++.++++++.. ..+...+.+..++.+++..
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceE
Confidence 48999999999999999999999999999999873 345689999999999888754 3445567777888877653
Q ss_pred EeccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEE
Q 012488 125 VDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAV 203 (462)
Q Consensus 125 ~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlv 203 (462)
.............+.++|..|+++|.+.+.+.|++++.++ ++++.. +.+....+..... ++..+++||+|
T Consensus 84 ~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~--~~~~~~~v~~~~~-------~~~~~~~a~~v 154 (397)
T 3oz2_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIK--ENGKVAGAKIRHN-------NEIVDVRAKMV 154 (397)
T ss_dssp EEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEE--ETTEEEEEEEEET-------TEEEEEEEEEE
T ss_pred eeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeee--ccceeeeeeeccc-------ccceEEEEeEE
Confidence 2222222333445689999999999999999999999998 888763 2222222333322 45578999999
Q ss_pred EecCCCChHhhhhhcCCC----Cc-eEEEEEEEEecCCcccccccCeeEEEecCCCCCCeEEEEEeCCCc-eEEEEEecc
Q 012488 204 IGADGANSRVAKSINAGD----YD-YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDH-VAVGTGTVT 277 (462)
Q Consensus 204 I~AdG~~S~vr~~l~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~-~~v~~~~~~ 277 (462)
|+|||.+|.+|++++... +. ............ ...++...++++. ..+.++.|++|.++. .+++++...
T Consensus 155 IgAdG~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~vg~~~~~ 229 (397)
T 3oz2_A 155 IAADGFESEFGRWAGLKSVILARNDIISALQYRMINV----DVDPDYTDFYLGS-IAPAGYIWVFPKGEGMANVGIGSSI 229 (397)
T ss_dssp EECCCTTCHHHHHHTCGGGCCCGGGEEEEEEEEEESC----CCCTTEEEEECST-TSTTEEEEEEEEETTEEEEEEEEET
T ss_pred EeCCccccHHHHHcCCCcccccceeeeeeEEEEeecc----ccCcccceeeeec-cCCCceEEEeecccceeEEEEeecc
Confidence 999999999999997652 11 122222222111 1234555666664 568899999998776 457766543
Q ss_pred CCC-cHHHHHHHHHHhhh--cccCCCeEEeEEeeecCCC-CCCcccCCCEEEEccCCcCcccCCcccHHHHHHHHHHHHH
Q 012488 278 HKG-DIKKFQLATRNRAK--DKILGGKIIRVEAHPIPEH-PRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAE 353 (462)
Q Consensus 278 ~~~-~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~i~~~-~~~~~~~~~v~liGDAAh~~~P~~G~G~~~a~~da~~la~ 353 (462)
+.. ....+.+.+.+.+. ..+......+.....++.. ...++..+|++++|||||.++|++|||+++||+||..||+
T Consensus 230 ~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~ 309 (397)
T 3oz2_A 230 NWIHNRFELKNYLDRFIENHPGLKKGQDIQLVTGGVSVSKVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQ 309 (397)
T ss_dssp TTSCSHHHHHHHHHHHHHTCHHHHTSEEEEEEEEEEECCCCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHH
T ss_pred chhhhhhhHHHHHHHHHHhCccccccceeeeeeccccccCcccceeeeeEEEcccccccCCCCcchhHHHHHHHHHHHHH
Confidence 322 22222222222111 1233345555555555543 3345678999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCChhHHHHHHHHHHHhhhhHHHHHHHhHhhhc-cCchhHHHHHHHhccccccccChhhHhhhhhcCCC
Q 012488 354 AIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFY-RSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGN 432 (462)
Q Consensus 354 ~l~~a~~~~~~~~~~~~L~~y~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 432 (462)
.|.+++..++ .++..|..|++.|++.+.+.........+.+. .++...+.+++.+.+..++.+++++++ |++..++
T Consensus 310 ~i~~~l~~~~--~~~~~L~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-k~~~~~~ 386 (397)
T 3oz2_A 310 VTKEAIESND--YSPQMMQKYEKLIKERFERKHLRNWVAKEKLAMLSDDTLDKLVDIVSEQVLTTISVEAIL-KAIAEKY 386 (397)
T ss_dssp HHHHHHHHTC--CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTTSCBCSCSHHHHH-HHHHHHC
T ss_pred HHHHHHHcCC--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhHHHhhhcCHHHHH-HHHHHHC
Confidence 9999998887 67899999999999887766555554444444 455678899999998888888888877 6665555
Q ss_pred Ch
Q 012488 433 PL 434 (462)
Q Consensus 433 ~~ 434 (462)
|.
T Consensus 387 p~ 388 (397)
T 3oz2_A 387 PE 388 (397)
T ss_dssp GG
T ss_pred HH
Confidence 54
No 2
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=100.00 E-value=4.6e-39 Score=318.98 Aligned_cols=366 Identities=22% Similarity=0.289 Sum_probs=263.8
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCC--CCCCcccccCccccccCCCChh--hHhcccceEEEEcCCCce-
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD--NCKPCGGAIPLCMVGEFDLPLD--IIDRKVTKMKMISPSNVA- 124 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~--~~~~~g~~i~~~~l~~~g~~~~--~~~~~~~~~~~~~~~~~~- 124 (462)
++||+||||||+|+++|+.|+++|++|+|+|+++. ....|++.++.+.++++|+++. .....+..+.+..+.+..
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEE
Confidence 47999999999999999999999999999999973 2356777888888888887543 333456677788777654
Q ss_pred EeccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEE-EEEeccCCccCCCCceeEEEecE
Q 012488 125 VDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYV-LYYTEYDGTKGGVGEKRTLEVDA 202 (462)
Q Consensus 125 ~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~adl 202 (462)
+.+..........+.++|..|.+.|.+.+++.|++++.++ |+++.. + ++.+. |.+.+. ++..+++||+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~-~~~v~gv~~~~~-------~~~~~~~a~~ 153 (397)
T 3cgv_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIK--E-NGKVAGAKIRHN-------NEIVDVRAKM 153 (397)
T ss_dssp EEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEE--E-TTEEEEEEEEET-------TEEEEEEEEE
T ss_pred EEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEE--e-CCEEEEEEEEEC-------CeEEEEEcCE
Confidence 4443222123345689999999999999999999999987 999873 2 34455 666432 3347899999
Q ss_pred EEecCCCChHhhhhhcCCC-C----ceEEEEEEEEecCCcccccccCeeEEEecCCCCCCeEEEEEeCCCc-eEEEEEec
Q 012488 203 VIGADGANSRVAKSINAGD-Y----DYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDH-VAVGTGTV 276 (462)
Q Consensus 203 vI~AdG~~S~vr~~l~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~-~~v~~~~~ 276 (462)
||+|||.+|.+|++++... . .+...+...+... . ..++...++++. ..+.+|.|++|..+. ..++.+..
T Consensus 154 vV~A~G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~-~~~~g~~~~~P~~~~~~~vg~~~~ 228 (397)
T 3cgv_A 154 VIAADGFESEFGRWAGLKSVILARNDIISALQYRMINV--D--VDPDYTDFYLGS-IAPAGYIWVFPKGEGMANVGIGSS 228 (397)
T ss_dssp EEECCCTTCHHHHHHTCCTTCCCGGGEEEEEEEEEESC--C--CCTTEEEEECST-TSTTEEEEEEEEETTEEEEEEEEE
T ss_pred EEECCCcchHhHHhcCCCccCCChhheeEEEEEEeccC--C--CCCCcEEEEeCC-cCCCceEEEEECCCCeEEEEEEec
Confidence 9999999999999997654 2 1222233222211 1 124455666665 678899999998775 46666654
Q ss_pred cCCC-cHHHHHHHHHHhhhc--ccCCCeEEeEEeeecCC-CCCCcccCCCEEEEccCCcCcccCCcccHHHHHHHHHHHH
Q 012488 277 THKG-DIKKFQLATRNRAKD--KILGGKIIRVEAHPIPE-HPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCA 352 (462)
Q Consensus 277 ~~~~-~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~i~~-~~~~~~~~~~v~liGDAAh~~~P~~G~G~~~a~~da~~la 352 (462)
.... ......+.+.+.+.. .+...++.+.....+|. .+.+++..+|++++|||||.++|++|+|+++|++||..|+
T Consensus 229 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la 308 (397)
T 3cgv_A 229 INWIHNRFELKNYLDRFIENHPGLKKGQDIQLVTGGVSVSKVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAA 308 (397)
T ss_dssp TTTCSCHHHHHHHHHHHHHTCHHHHTSEEEEEEEEEEECCCCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHH
T ss_pred cccccCCCCHHHHHHHHHHhCcCCCCCeEEeeeeeeeecCCCccceeeCCEEEEEccccCCCCCCCCCHHHHHHHHHHHH
Confidence 4331 112222222222211 13345555555555554 4567788899999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCCChhHHHHHHHHHHHhhhhHHHHHHHhHhhhccC-chhHHHHHHHhccccccccChhhHhhhhhcCC
Q 012488 353 EAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRS-NPAREAFVEMCADEYVQKMTFDSYLYKRVVPG 431 (462)
Q Consensus 353 ~~l~~a~~~~~~~~~~~~L~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 431 (462)
+.|.+++..++ .+...|..|++.++..+.+.+.....+.+++++. +...+.+++.+.+..++.+.....+ +.+++.
T Consensus 309 ~~l~~~~~~~~--~~~~~l~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 385 (397)
T 3cgv_A 309 QVTKEAIESND--YSPQMMQKYEKLIKERFERKHLRNWVAKEKLAMLSDDTLDKLVDIVSEQVLTTISVEAIL-KAIAEK 385 (397)
T ss_dssp HHHHHHHHHTC--CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTSCBCSCSHHHHH-HHHHHH
T ss_pred HHHHHHHHcCC--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHhcCccchhhccHHHHH-HHHHHh
Confidence 99999887665 5678999999999999999999888888888774 4467889999988888877544443 444444
Q ss_pred CC
Q 012488 432 NP 433 (462)
Q Consensus 432 ~~ 433 (462)
+|
T Consensus 386 ~p 387 (397)
T 3cgv_A 386 YP 387 (397)
T ss_dssp CC
T ss_pred CH
Confidence 55
No 3
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=100.00 E-value=1.3e-36 Score=306.52 Aligned_cols=331 Identities=20% Similarity=0.282 Sum_probs=234.2
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCC---CCCCcccccCccccccCCCChhh---HhcccceEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD---NCKPCGGAIPLCMVGEFDLPLDI---IDRKVTKMKMISPSN 122 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~---~~~~~g~~i~~~~l~~~g~~~~~---~~~~~~~~~~~~~~~ 122 (462)
+++||+||||||+|+++|+.|+++|++|+|+|+.+. ....||..++.+.++++++.... ......++.++.+.+
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 84 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDM 84 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCC
Confidence 468999999999999999999999999999999873 23457777777788888865432 222344555666554
Q ss_pred ce-EeccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEE-EEEeccCCccCCCCceeEEE
Q 012488 123 VA-VDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYV-LYYTEYDGTKGGVGEKRTLE 199 (462)
Q Consensus 123 ~~-~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~ 199 (462)
.. +.+ ....+.++|..|.+.|.+.+.+.|++++.++ |+++.. +++.+. |.+.+. .+|+..+++
T Consensus 85 ~~~~~~------~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~---~~~~v~gv~~~~~-----~~G~~~~~~ 150 (453)
T 3atr_A 85 QTVWTV------NGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIF---EDGYVKGAVLFNR-----RTNEELTVY 150 (453)
T ss_dssp SCEEEE------EEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEE---ETTEEEEEEEEET-----TTTEEEEEE
T ss_pred ceEEeE------CCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEE---ECCEEEEEEEEEc-----CCCceEEEE
Confidence 32 111 1123478999999999999999999999998 988873 233343 555431 013335899
Q ss_pred ecEEEecCCCChHhhhhhcCCC------C--ceEEEEEEEEecCCcccccccCeeEEEecCCCCCCeEEEEEeCCCc-eE
Q 012488 200 VDAVIGADGANSRVAKSINAGD------Y--DYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDH-VA 270 (462)
Q Consensus 200 adlvI~AdG~~S~vr~~l~~~~------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~-~~ 270 (462)
||+||+|||.+|.+|+.++... + .+..++...+...... ..++...++++....+++|+|++|..+. .+
T Consensus 151 ad~VV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~ 228 (453)
T 3atr_A 151 SKVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDI--EDHDYLRIFIDQETSPGGYWWYFPKGKNKVN 228 (453)
T ss_dssp CSEEEECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCC--TTTTEEEEECCTTTSTTSCEEEEEEETTEEE
T ss_pred cCEEEECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCc--cCCCeEEEEECCCCCCCcEEEEEECCCCeEE
Confidence 9999999999999999987642 1 3345555544433221 1234455677666667889999998665 45
Q ss_pred EEEEeccCCC---cHHHHHHHHHHhhhcccCCCeEEeEEeeecCC-CCCCcccCCCEEEEccCCcCcccCCcccHHHHHH
Q 012488 271 VGTGTVTHKG---DIKKFQLATRNRAKDKILGGKIIRVEAHPIPE-HPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAK 346 (462)
Q Consensus 271 v~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~-~~~~~~~~~~v~liGDAAh~~~P~~G~G~~~a~~ 346 (462)
++.+...... ..+.+.+.+.+ +.+.+.+.++.......++. .+.++|..+|++++|||||+++|++|||+++||+
T Consensus 229 vg~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~~~Ai~ 307 (453)
T 3atr_A 229 VGLGIQGGMGYPSIHEYYKKYLDK-YAPDVDKSKLLVKGGALVPTRRPLYTMAWNGIIVIGDSGFTVNPVHGGGKGSAMI 307 (453)
T ss_dssp EEEEEESSSCCCCHHHHHHHHHHH-HCTTEEEEEEEEEEEEEEECSSCCSCSEETTEEECGGGGTCSCTTTCCCHHHHHH
T ss_pred EEEEecCCCCCCCHHHHHHHHHHh-hhhhcCCCeEEeccceeccCCCCCCceecCCEEEEeCcccCCCCCccccHHHHHH
Confidence 6665433221 22334444332 22333333444444344444 4667788899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCChhHHHHHHHHHHHhhhhHHHHHHHhHhhhcc
Q 012488 347 SGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398 (462)
Q Consensus 347 da~~la~~l~~a~~~~~~~~~~~~L~~y~~~~~~~~~~~~~~~~~~~~~~~~ 398 (462)
||..|++.|.+++..++ .+...|..|++.++......+.....+++++..
T Consensus 308 da~~la~~l~~~l~~~~--~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~~ 357 (453)
T 3atr_A 308 SGYCAAKAILSAFETGD--FSASGLWDMNICYVNEYGAKQASLDIFRRFLQK 357 (453)
T ss_dssp HHHHHHHHHHHHHHHTC--CSTTTTTHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCC--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998877654 456789999999999998888888888887765
No 4
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=100.00 E-value=3e-35 Score=298.96 Aligned_cols=327 Identities=19% Similarity=0.142 Sum_probs=224.5
Q ss_pred CCCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCC-CCCCcccccCc---cccccCCCChhhHhc-ccceEEEEcCC
Q 012488 47 TNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPL---CMVGEFDLPLDIIDR-KVTKMKMISPS 121 (462)
Q Consensus 47 ~~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~-~~~~~g~~i~~---~~l~~~g~~~~~~~~-~~~~~~~~~~~ 121 (462)
.++++||+||||||+||++|+.|+++|++|+||||.+. ....++.+++. +.|+++|+.+.+... ...... + .
T Consensus 9 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~-~--~ 85 (499)
T 2qa2_A 9 HRSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGH-F--G 85 (499)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEE-E--T
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccce-e--c
Confidence 35678999999999999999999999999999999873 33345555653 467888988776543 111111 1 2
Q ss_pred CceEeccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEe
Q 012488 122 NVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEV 200 (462)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~a 200 (462)
+..++........++...++|..+++.|.+.+++.|++|++++ |++++. +++.++|++.+++ | ..+++|
T Consensus 86 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~---~~~~v~v~~~~~~------g-~~~~~a 155 (499)
T 2qa2_A 86 GRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTD---EGDHVVVEVEGPD------G-PRSLTT 155 (499)
T ss_dssp TEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEE---CSSCEEEEEECSS------C-EEEEEE
T ss_pred ceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEE---eCCEEEEEEEcCC------C-cEEEEe
Confidence 2233332211233455689999999999999999999999988 999973 3446888888762 3 358999
Q ss_pred cEEEecCCCChHhhhhhcCCCCc--e-EEEEEEEEecCCcccccccCeeEEEecCCCCCCeEEEEEeCCCc-eEEEEEec
Q 012488 201 DAVIGADGANSRVAKSINAGDYD--Y-AIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDH-VAVGTGTV 276 (462)
Q Consensus 201 dlvI~AdG~~S~vr~~l~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~-~~v~~~~~ 276 (462)
|+||+|||.+|.+|++++..... + ...+...+.... .+....++ ..+.+++|++|..+. ..+.....
T Consensus 156 ~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~v~~~~-----~~~~~~~~----~~~~g~~~~~P~~~g~~~~~~~~~ 226 (499)
T 2qa2_A 156 RYVVGCDGGRSTVRKAAGFDFPGTSASREMFLADIRGCE-----ITPRPIGE----TVPLGMVMSAPLGDGVDRIIVCER 226 (499)
T ss_dssp EEEEECCCTTCHHHHHTTCCCCEECCCCCEEEEEEESCC-----CCCEEEEE----EETTEEEEEEECSSSCEEEEEEET
T ss_pred CEEEEccCcccHHHHHcCCCCCCCCCccEEEEEEEEECC-----CCcceEEE----ECCCeEEEEEEcCCCEEEEEEEec
Confidence 99999999999999999765211 1 112222222221 11211222 234678899998665 34443321
Q ss_pred c-------CCCcHHHHHHHHHHhhhcccCCCeEEeEEeeecCCCCCCcccCCCEEEEccCCcCcccCCcccHHHHHHHHH
Q 012488 277 T-------HKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349 (462)
Q Consensus 277 ~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~v~liGDAAh~~~P~~G~G~~~a~~da~ 349 (462)
. .....+++.+.+...+...+...++.....++.......+|..+||+|+|||||.++|+.|||+|+||+||.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~ 306 (499)
T 2qa2_A 227 GAPARRRTGPPPYQEVAAAWQRLTGQDISHGEPVWVSAFGDPARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSV 306 (499)
T ss_dssp TCCCCCCSSSCCHHHHHHHHHHHHSCCCTTCEEEEEEEECCCEEECSCSEETTEEECGGGTEEECCCSSCHHHHHHHHHH
T ss_pred CCCCccccCCCCHHHHHHHHHHHhCCCCCccceeEEEEEeCCcEEcccccCCCEEEEecccccCCCccccchhhhHHHHH
Confidence 1 112456666666665544343334444444555445667888999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCChhHHHHHHHHHHHhhhhHHHHHHHhHhhhcc
Q 012488 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398 (462)
Q Consensus 350 ~la~~l~~a~~~~~~~~~~~~L~~y~~~~~~~~~~~~~~~~~~~~~~~~ 398 (462)
.|++.|...++.. ..+..|..|++.++......+.....+.+++..
T Consensus 307 ~La~~La~~l~g~---~~~~~L~~Ye~eR~~~~~~~~~~s~~~~~l~~~ 352 (499)
T 2qa2_A 307 NLGWKLAAVVSGR---APAGLLDTYHEERHPVGRRLLMNTQAQGMLFLS 352 (499)
T ss_dssp HHHHHHHHHHTTS---SCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCC---CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999887532 356789999988888777777777666666654
No 5
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=100.00 E-value=3.9e-35 Score=298.14 Aligned_cols=327 Identities=17% Similarity=0.129 Sum_probs=224.7
Q ss_pred CCCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCC-CCCCcccccCc---cccccCCCChhhHhc-ccceEEEEcCC
Q 012488 47 TNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPL---CMVGEFDLPLDIIDR-KVTKMKMISPS 121 (462)
Q Consensus 47 ~~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~-~~~~~g~~i~~---~~l~~~g~~~~~~~~-~~~~~~~~~~~ 121 (462)
.++++||+||||||+||++|+.|+++|++|+||||.+. ....++.+++. +.|+++|+.+.+... ...... + .
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~-~--~ 84 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGH-F--G 84 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEE-E--T
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhcccccccc-c--c
Confidence 35578999999999999999999999999999999873 23445556653 467888988776543 111111 1 1
Q ss_pred CceEeccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEe
Q 012488 122 NVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEV 200 (462)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~a 200 (462)
+..++........++...++|..+++.|.+.+++.|++|++++ |++++. +++.++|++.+++ | ..+++|
T Consensus 85 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~---~~~~v~v~~~~~~------g-~~~~~a 154 (500)
T 2qa1_A 85 GLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTD---DGAGVTVEVRGPE------G-KHTLRA 154 (500)
T ss_dssp TEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEE---ETTEEEEEEEETT------E-EEEEEE
T ss_pred ceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEE---cCCeEEEEEEcCC------C-CEEEEe
Confidence 2223332111122345689999999999999999999999988 999973 3345888887761 2 358999
Q ss_pred cEEEecCCCChHhhhhhcCCCCc--e-EEEEEEEEecCCcccccccCeeEEEecCCCCCCeEEEEEeCCCce-EEEEEec
Q 012488 201 DAVIGADGANSRVAKSINAGDYD--Y-AIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHV-AVGTGTV 276 (462)
Q Consensus 201 dlvI~AdG~~S~vr~~l~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~~-~v~~~~~ 276 (462)
|+||+|||.+|.+|++++..... + ...+...+.... .++...++ ..+.+++|++|..+.. .+.....
T Consensus 155 ~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~----~~~~g~~~~~p~~~g~~~~~~~~~ 225 (500)
T 2qa1_A 155 AYLVGCDGGRSSVRKAAGFDFPGTAATMEMYLADIKGVE-----LQPRMIGE----TLPGGMVMVGPLPGGITRIIVCER 225 (500)
T ss_dssp SEEEECCCTTCHHHHHTTCCCCEECCCCEEEEEEEESCC-----CCCEEEEE----EETTEEEEEEEETTTEEEEEEEET
T ss_pred CEEEECCCcchHHHHHcCCCcCCCccceEEEEEEEEeCC-----CCCceEEE----ECCCcEEEEEEcCCCEEEEEEEcC
Confidence 99999999999999999865211 1 122222233221 12212222 2346788999976653 4443321
Q ss_pred cC-------CCcHHHHHHHHHHhhhcccCCCeEEeEEeeecCCCCCCcccCCCEEEEccCCcCcccCCcccHHHHHHHHH
Q 012488 277 TH-------KGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349 (462)
Q Consensus 277 ~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~v~liGDAAh~~~P~~G~G~~~a~~da~ 349 (462)
.. ....+++.+.+...+...+...++.....++.......+|..+||+|+|||||.++|+.|||+|+||+||.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~ 305 (500)
T 2qa1_A 226 GTPPQRRETPPSWHEVADAWKRLTGDDIAHAEPVWVSAFGNATRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDAV 305 (500)
T ss_dssp TCCC-----CCCHHHHHHHHHHHHSCCCTTSEEEEEEEEECCEEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHH
T ss_pred CCCCccccCCCCHHHHHHHHHHhcCCCCCccceeEEEEeccCcEEccccccCCEEEEEccccCCCCccccchhhhHHHHH
Confidence 11 12345666666665544343334444445555555667888899999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCChhHHHHHHHHHHHhhhhHHHHHHHhHhhhcc
Q 012488 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398 (462)
Q Consensus 350 ~la~~l~~a~~~~~~~~~~~~L~~y~~~~~~~~~~~~~~~~~~~~~~~~ 398 (462)
.|++.|...++.. ..+..|..|+++++......+.....+.+++..
T Consensus 306 ~La~~La~~~~g~---~~~~~L~~Y~~eR~~~~~~~~~~s~~~~~l~~~ 351 (500)
T 2qa1_A 306 NLGWKLGAVVNGT---ATEELLDSYHSERHAVGKRLLMNTQAQGLLFLS 351 (500)
T ss_dssp HHHHHHHHHHTTS---SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCC---CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999887532 357888899988887777777766666666654
No 6
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=100.00 E-value=2.8e-35 Score=303.06 Aligned_cols=333 Identities=17% Similarity=0.175 Sum_probs=220.5
Q ss_pred CCCCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCC-CCCCcccccC---ccccccCCCChhhHhcccceEEEEcCC
Q 012488 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIP---LCMVGEFDLPLDIIDRKVTKMKMISPS 121 (462)
Q Consensus 46 ~~~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~-~~~~~g~~i~---~~~l~~~g~~~~~~~~~~~~~~~~~~~ 121 (462)
+..+++||+||||||+||++|+.|+++|++|+||||.+. ....++.+++ .+.|+++|+++.+........... ..
T Consensus 45 ~~~~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~-~~ 123 (570)
T 3fmw_A 45 DAALTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLP-FA 123 (570)
T ss_dssp ------CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCC-BT
T ss_pred CCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCce-eC
Confidence 345679999999999999999999999999999999873 3344555564 346788898887765433211000 01
Q ss_pred Cc---eEeccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeE
Q 012488 122 NV---AVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRT 197 (462)
Q Consensus 122 ~~---~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 197 (462)
+. .++.........+...+++..+++.|.+.+++.|++|++++ |++++ .+++.++|++.+.+ | ..+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~---~~~~~v~v~~~~~~------G-~~~ 193 (570)
T 3fmw_A 124 GIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLR---QDAEAVEVTVAGPS------G-PYP 193 (570)
T ss_dssp TBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECC---BCSSCEEEEEEETT------E-EEE
T ss_pred CcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEE---EcCCeEEEEEEeCC------C-cEE
Confidence 11 22222211223334578999999999999999999999997 88887 23446888774321 1 158
Q ss_pred EEecEEEecCCCChHhhhhhcCCC--CceE-EEEEEEEecCCcccccccCeeEEEecCCCCCCeEEEE-EeCCCce--EE
Q 012488 198 LEVDAVIGADGANSRVAKSINAGD--YDYA-IAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWV-FPKCDHV--AV 271 (462)
Q Consensus 198 ~~adlvI~AdG~~S~vr~~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~-~p~~~~~--~v 271 (462)
++||+||+|||.+|.+|++++... ..+. ..+...+....... + +.+ ...+.+++|+ +|..+.. ++
T Consensus 194 ~~a~~vV~ADG~~S~vR~~lGi~~~~~~~~~~~~~~~v~~~~~~~---~----~~~--~~~~~G~~~~~~P~~~g~~~~i 264 (570)
T 3fmw_A 194 VRARYGVGCDGGRSTVRRLAADRFPGTEATVRALIGYVTTPEREV---P----RRW--ERTPDGILVLAFPPEGGLGPGW 264 (570)
T ss_dssp EEESEEEECSCSSCHHHHHTTCCCCCCCCCEEEEEEECCCCSCSS---C----CCC--CCCCSSCEEECCCC------CE
T ss_pred EEeCEEEEcCCCCchHHHHcCCCCccceeeeEEEEEEEEecCCCc---c----eEE--EecCCEEEEEEeecCCCeEEEE
Confidence 999999999999999999998652 2221 12222222221110 0 011 1234456666 6766542 23
Q ss_pred EEEecc-------CCCcHHHHHHHHHHhhhcccCCCeEE-eEEeeecCCCCCCcccCCCEEEEccCCcCcccCCcccHHH
Q 012488 272 GTGTVT-------HKGDIKKFQLATRNRAKDKILGGKII-RVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYF 343 (462)
Q Consensus 272 ~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~i~~~~~~~~~~~~v~liGDAAh~~~P~~G~G~~~ 343 (462)
...... .....+++.+.+...+...+...+.. +...+++......+|..+|++|+|||||.++|+.|||+|+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~ 344 (570)
T 3fmw_A 265 SSSSTGHSPAADEGPVTLEDLGAAVARVRGTPLTLTEPVSWLSRFGDASRQAKRYRSGRVLLAGDAAHVHFPIGGQGLNT 344 (570)
T ss_dssp EEEEESCC-----CCCCHHHHHHHTTSSSSCCCCCCSCCEEEEEECCCCEECSCSEETTEEECGGGTEECCCCSSCHHHH
T ss_pred EEEeCCCCccccccCCCHHHHHHHHHHHhhcccccceeeeeeEEeecccccccccccCCEEEEEecceecCCCcCcCHhH
Confidence 322211 12334566665555444444333333 4556666666778899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCChhHHHHHHHHHHHhhhhHHHHHHHhHhhhccCch
Q 012488 344 AAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNP 401 (462)
Q Consensus 344 a~~da~~la~~l~~a~~~~~~~~~~~~L~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (462)
||+||..|++.|...++.. ..+..|..|++.++......+...+.+.+++...+.
T Consensus 345 gl~DA~~La~~La~~~~g~---~~~~lL~~Ye~eR~~~~~~~~~~s~~~~~l~~~~~~ 399 (570)
T 3fmw_A 345 GLQDAVNLGWKLAARVRGW---GSEELLDTYHDERHPVAERVLLNTRAQLALMRPDEQ 399 (570)
T ss_dssp HHHHHHHHHHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTT
T ss_pred HHHHHHHHHHHHHHHHcCC---CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCch
Confidence 9999999999999887543 467889999999998888888888888888876543
No 7
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=7.3e-34 Score=282.65 Aligned_cols=326 Identities=16% Similarity=0.104 Sum_probs=216.0
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCC-CCCcccccC---ccccccCCCChhhHhc--ccceEEEEcCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDN-CKPCGGAIP---LCMVGEFDLPLDIIDR--KVTKMKMISPS 121 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~-~~~~g~~i~---~~~l~~~g~~~~~~~~--~~~~~~~~~~~ 121 (462)
..++||+||||||+||++|+.|+++|++|+||||.+.. ...++..++ .+.|+++|+.+.+... ....+.++...
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 100 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFR 100 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECC
Confidence 44689999999999999999999999999999998733 223344443 3467888988877654 34566677665
Q ss_pred -CceE-eccCcc---cCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCce
Q 012488 122 -NVAV-DIGQTL---KPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEK 195 (462)
Q Consensus 122 -~~~~-~~~~~~---~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 195 (462)
+... .+.... ......+.++|..|++.|.+.+.+ ++|++++ |++++. +++.+.|++.+|
T Consensus 101 ~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~---~~~~v~v~~~~g---------- 165 (407)
T 3rp8_A 101 SGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEE---DADGVTVWFTDG---------- 165 (407)
T ss_dssp TCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEE---ETTEEEEEETTS----------
T ss_pred CCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEe---cCCcEEEEEcCC----------
Confidence 4422 221100 011224478999999999999987 7888888 999983 344688888877
Q ss_pred eEEEecEEEecCCCChHhhhhh-cCC-CCce--EEEEEEEEecCCcccccccCeeEEEecCCCCCCeEEEEEeCCCceE-
Q 012488 196 RTLEVDAVIGADGANSRVAKSI-NAG-DYDY--AIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVA- 270 (462)
Q Consensus 196 ~~~~adlvI~AdG~~S~vr~~l-~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~~~- 270 (462)
.+++||+||+|||.+|.+|+++ +.. ...+ ...+...+..+... ........++ .+++++|++|..+...
T Consensus 166 ~~~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~p~~~~~~~ 239 (407)
T 3rp8_A 166 SSASGDLLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEAL--APGDQWTTFV----GEGKQVSLMPVSAGRFY 239 (407)
T ss_dssp CEEEESEEEECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTT--CCTTEEEEEE----ETTEEEEEEEETTTEEE
T ss_pred CEEeeCEEEECCCcChHHHHHhcCCCCCCcccCcEEEEEEEeccccc--CCCCceEEEE----CCCcEEEEEEcCCCeEE
Confidence 6899999999999999999999 543 2222 23343433333221 1122233343 3467899999876642
Q ss_pred EEEEeccCC---CcHHHHHHHHHHhhh-------cc---cCCCeEEeEEeeecCCCCCCcccCCCEEEEccCCcCcccCC
Q 012488 271 VGTGTVTHK---GDIKKFQLATRNRAK-------DK---ILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCS 337 (462)
Q Consensus 271 v~~~~~~~~---~~~~~~~~~~~~~~~-------~~---l~~~~~~~~~~~~i~~~~~~~~~~~~v~liGDAAh~~~P~~ 337 (462)
+........ ...+.+.+.+.+.+. +. ...........+++. +.++|..+|++|+|||||.++|++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~rv~LvGDAAh~~~P~~ 317 (407)
T 3rp8_A 240 FFFDVPLPAGLAEDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIE--PFSRLVRGRVALLGDAGHSTTPDI 317 (407)
T ss_dssp EEEEEECCTTCSCCTTTHHHHHHHHTTTCCHHHHHHHHHSCGGGCEEEEEEECC--CCSCCEETTEEECGGGTCCCCGGG
T ss_pred EEEEeCCCcCCCCCchhHHHHHHHHhcCCChHHHHHHHcCCccceeEEeeEecC--CCCceecCCEEEEEcccccCCcch
Confidence 222221111 111222222222211 11 111222233444443 337788999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHhhcCCCCCChhHHHHHHHHHHHhhhhHHHHHHHhHhhhccCchh
Q 012488 338 GEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPA 402 (462)
Q Consensus 338 G~G~~~a~~da~~la~~l~~a~~~~~~~~~~~~L~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (462)
|||+|+||+||..|++.|... + .....|..|++.++............+.+++....+.
T Consensus 318 GqG~~~al~da~~La~~L~~~---~---~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~ 376 (407)
T 3rp8_A 318 GQGGCAAMEDAVVLGAVFRQT---R---DIAAALREYEAQRCDRVRDLVLKARKRCDITHGKDMQ 376 (407)
T ss_dssp SCHHHHHHHHHHHHHHHHHSC---C---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHH
T ss_pred hhhHHHHHHHHHHHHHHHhcC---C---CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCHH
Confidence 999999999999999999742 1 3467788888888888888888888888888776543
No 8
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=100.00 E-value=2.5e-33 Score=293.56 Aligned_cols=343 Identities=14% Similarity=0.129 Sum_probs=223.8
Q ss_pred CCccEEEECCchHHHHHHHHHHH-----CCCcEEEEcCCCCC-CCCcccccC---ccccccCCCChhhHhc--ccceEEE
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAK-----NGVETFLIERKLDN-CKPCGGAIP---LCMVGEFDLPLDIIDR--KVTKMKM 117 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~-----~g~~v~v~E~~~~~-~~~~g~~i~---~~~l~~~g~~~~~~~~--~~~~~~~ 117 (462)
.++||+||||||+||++|+.|++ .|++|+||||++.. ....+.+++ .++|+++|+.+.+... ....+.+
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~ 86 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIAL 86 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEE
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEE
Confidence 45799999999999999999999 99999999998732 223334454 4578899998887653 3445666
Q ss_pred EcCCCc-eE----eccCcc--cCCCeEEeeehHHHHHHHHHHHHHCC---CEEEcce-eEEEEecCC-----CCCCEEEE
Q 012488 118 ISPSNV-AV----DIGQTL--KPHEYIGMVRREVLDAYLRERAEKNG---ASVINGL-FMKMDLPRN-----FEQPYVLY 181 (462)
Q Consensus 118 ~~~~~~-~~----~~~~~~--~~~~~~~~v~r~~l~~~L~~~~~~~g---v~i~~~~-v~~~~~~~~-----~~~~~~v~ 181 (462)
+.+... .+ .+.... ........++|..++++|.+.+++.| +++.+++ +++++.... ++..++++
T Consensus 87 ~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~v~ 166 (665)
T 1pn0_A 87 YNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMT 166 (665)
T ss_dssp EEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCEEEE
T ss_pred EeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCEEEE
Confidence 665421 11 111110 11122347899999999999999887 8999998 998874220 12358887
Q ss_pred EeccC---------------Ccc-------------------CCCCceeEEEecEEEecCCCChHhhhhhcCCCC--ceE
Q 012488 182 YTEYD---------------GTK-------------------GGVGEKRTLEVDAVIGADGANSRVAKSINAGDY--DYA 225 (462)
Q Consensus 182 ~~~~~---------------~~~-------------------~~~~~~~~~~adlvI~AdG~~S~vr~~l~~~~~--~~~ 225 (462)
+.+.. +.. ...|...+++||+||+|||.+|.||++++.... .+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg~~~~g~~~~ 246 (665)
T 1pn0_A 167 LRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMIGEQTD 246 (665)
T ss_dssp EEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCEEEEEE
T ss_pred EEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcCCCCCCCCcc
Confidence 76520 000 013445789999999999999999999987532 121
Q ss_pred EEEEEEEecC-CcccccccCeeEEEecCCCCCCeEEEEEeCCCc-eEEEEEecc----------CCCcHHHHHHHHHHhh
Q 012488 226 IAFQERVKIP-DEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDH-VAVGTGTVT----------HKGDIKKFQLATRNRA 293 (462)
Q Consensus 226 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~-~~v~~~~~~----------~~~~~~~~~~~~~~~~ 293 (462)
..| ..+.+. ............++. .+.+++|++|..+. ..+...... .....+++.+.+.+.+
T Consensus 247 ~~~-~v~d~~~~~~~p~~~~~~~~~~----~~~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~~~~t~e~~~~~~~~~~ 321 (665)
T 1pn0_A 247 YIW-GVLDAVPASNFPDIRSRCAIHS----AESGSIMIIPRENNLVRFYVQLQARAEKGGRVDRTKFTPEVVIANAKKIF 321 (665)
T ss_dssp EEE-EEEEEEEECCCTTTTSEEEEEC----SSSCEEEEEECSTTCEEEEEEECC----------CCCCHHHHHHHHHHHH
T ss_pred EEE-EEEEEEECCCCCCcceEEEEEe----CCCceEEEEEcCCCEEEEEEEeCCccccccccCcCCCCHHHHHHHHHHHh
Confidence 112 111110 000000011111111 23567888887665 233222111 1123455655555544
Q ss_pred hcc-cCCCeEEeEEeeecCCCCCCccc-CCCEEEEccCCcCcccCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCChhHH
Q 012488 294 KDK-ILGGKIIRVEAHPIPEHPRPRRL-SGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDL 371 (462)
Q Consensus 294 ~~~-l~~~~~~~~~~~~i~~~~~~~~~-~~~v~liGDAAh~~~P~~G~G~~~a~~da~~la~~l~~a~~~~~~~~~~~~L 371 (462)
.+. +.-..+.++..+++......+|. .+||+|+|||||.++|+.|||+|+||+||..|++.|...++.. ..+..|
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~g~---a~~~lL 398 (665)
T 1pn0_A 322 HPYTFDVQQLDWFTAYHIGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLTGR---AKRDIL 398 (665)
T ss_dssp TTSCCEEEEEEEEEEEEEEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHTTC---BCGGGG
T ss_pred CcccCceeeEEEEEeeeccceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHcCC---CcHHHH
Confidence 331 11122333445555555667787 7999999999999999999999999999999999999887542 457889
Q ss_pred HHHHHHHHHhhhhHHHHHHHhHhhhccC
Q 012488 372 RKYLEKWDKTYWPTYKVLDVLQKVFYRS 399 (462)
Q Consensus 372 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (462)
..|++.++......+.....+.++|...
T Consensus 399 ~tYe~eR~p~a~~~i~~s~~~~~l~~~~ 426 (665)
T 1pn0_A 399 KTYEEERQPFAQALIDFDHQFSRLFSGR 426 (665)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999888888888777788877654
No 9
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=100.00 E-value=7.5e-33 Score=284.82 Aligned_cols=333 Identities=17% Similarity=0.158 Sum_probs=217.9
Q ss_pred CCCCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCC-CCCCcccccCc---cccccCCCChhhHhcccc-----eE-
Q 012488 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPL---CMVGEFDLPLDIIDRKVT-----KM- 115 (462)
Q Consensus 46 ~~~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~-~~~~~g~~i~~---~~l~~~g~~~~~~~~~~~-----~~- 115 (462)
|+.+++||+||||||+||++|+.|+++|++|+||||.+. ....++.++.. +.++++|+.+.+...... .+
T Consensus 1 M~~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~ 80 (535)
T 3ihg_A 1 MNDHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFV 80 (535)
T ss_dssp CCCCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCE
T ss_pred CCCccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCccccccee
Confidence 455678999999999999999999999999999999983 33455666653 467888988777654322 11
Q ss_pred --EEEcCCCceEe-----cc------CcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCC---CE
Q 012488 116 --KMISPSNVAVD-----IG------QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQ---PY 178 (462)
Q Consensus 116 --~~~~~~~~~~~-----~~------~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~---~~ 178 (462)
.+....+..+. +. ....+. ....++|..|++.|.+.+++.|+++++++ |++++. ++++ .+
T Consensus 81 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~--~~~~~~~~v 157 (535)
T 3ihg_A 81 IRLAESVRGEILRTVSESFDDMVAATEPCTPA-GWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQ--HDDDAGAGV 157 (535)
T ss_dssp EEEESSSSSCEEEEEESCHHHHHHTTGGGCSC-CCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEE--ECGGGCSEE
T ss_pred eeEEeccCCceeeeccccccccccccccCCCC-cccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEE--CCCCccccE
Confidence 12222333221 10 001111 13368999999999999999999999998 999883 2221 57
Q ss_pred EEEEeccCCccCCCCceeEEEecEEEecCCCChHhhhhhcCCCCc--eE-EEEEEEEecCCcccccccCeeEEEecCCCC
Q 012488 179 VLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYD--YA-IAFQERVKIPDEKMVYYENLAEMYVGDDVS 255 (462)
Q Consensus 179 ~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S~vr~~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (462)
++++.+++ + ..+++||+||+|||.+|.+|++++..... +. ..+...+...-............++. .
T Consensus 158 ~v~~~~~~------~-~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 227 (535)
T 3ihg_A 158 TARLAGPD------G-EYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFDADLSGIMEPGTTGWYYLH---H 227 (535)
T ss_dssp EEEEEETT------E-EEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEECCGGGTSCTTCCEEEEEE---C
T ss_pred EEEEEcCC------C-eEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEeccChhhccCCceEEEEEE---C
Confidence 88887752 2 47899999999999999999999876221 11 11111111111111001111222222 2
Q ss_pred CCeEEEEEeCCC-c-eEEEEEeccCC------CcHHHHHHHHHHhhhcccCCCeEEeEEeeecCCCCCCcccCCCEEEEc
Q 012488 256 PDFYGWVFPKCD-H-VAVGTGTVTHK------GDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVG 327 (462)
Q Consensus 256 ~~~~~w~~p~~~-~-~~v~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~v~liG 327 (462)
+.+.+|++|..+ . ..+......+. ...+.+.+.+.+.+.......++.....+++......+|..+|++|+|
T Consensus 228 p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~grv~LvG 307 (535)
T 3ihg_A 228 PEFKGTFGPTDRPDRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDAPEVKPELVDIQGWEMAARIAERWREGRVFLAG 307 (535)
T ss_dssp SSCEEEEEECSSTTEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCSSCCCEEEEEEEEEEEEEEESCSEETTEEECT
T ss_pred CCceEEEEEecCCCEEEEEEeeCccccCccccCCHHHHHHHHHHHhCCCCCceeEEEeeEeeeeEEEECccccCCEEEEe
Confidence 445677777654 2 33333222111 123445555555443222234556666666666667788899999999
Q ss_pred cCCcCcccCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCChhHHHHHHHHHHHhhhhHHHHHHHhHh
Q 012488 328 DAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQK 394 (462)
Q Consensus 328 DAAh~~~P~~G~G~~~a~~da~~la~~l~~a~~~~~~~~~~~~L~~y~~~~~~~~~~~~~~~~~~~~ 394 (462)
||||.++|+.|||+|+||+||..|++.|...++.. .....|..|++.++..............+
T Consensus 308 DAAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g~---~~~~lL~~Ye~eR~p~a~~~~~~s~~~~~ 371 (535)
T 3ihg_A 308 DAAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQ---AGAGLLDTYEDERKVAAELVVAEALAIYA 371 (535)
T ss_dssp TTTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTS---SCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCccCCccccccccHHHHHHHHHHHhcCC---CcHHHHHhhHHHHHHHHHHHHHHHHHhhH
Confidence 99999999999999999999999999999887543 35678888888887776666555544443
No 10
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=100.00 E-value=1.9e-33 Score=278.42 Aligned_cols=328 Identities=17% Similarity=0.209 Sum_probs=206.8
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCC---CCCCcccccCc---cccccCCCChhhHhc--ccceEEEEcC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD---NCKPCGGAIPL---CMVGEFDLPLDIIDR--KVTKMKMISP 120 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~---~~~~~g~~i~~---~~l~~~g~~~~~~~~--~~~~~~~~~~ 120 (462)
|++||+||||||+|+++|+.|+++|++|+|+||.+. ....+++.++. +.|+++|+.+.+... ....+.+...
T Consensus 1 m~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 80 (394)
T 1k0i_A 1 MKTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFA 80 (394)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEET
T ss_pred CCccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEEC
Confidence 467999999999999999999999999999999873 22344445543 467888998877653 2334444443
Q ss_pred CCc-eEeccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEE-eccCCccCCCCceeE
Q 012488 121 SNV-AVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYY-TEYDGTKGGVGEKRT 197 (462)
Q Consensus 121 ~~~-~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~ 197 (462)
... .+++... ........+.+..+.+.|.+.+.+.|+++++++ |+++.. ++++.+.|++ .+| +..+
T Consensus 81 ~~~~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~--~~~~~~~v~~~~~g--------~~~~ 149 (394)
T 1k0i_A 81 GQRRRIDLKRL-SGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHD--LQGERPYVTFERDG--------ERLR 149 (394)
T ss_dssp TEEEEECHHHH-HTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEEC--TTSSSCEEEEEETT--------EEEE
T ss_pred CceEEeccccc-cCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEE--ecCCceEEEEecCC--------cEEE
Confidence 221 1111110 112234467888999999999999999999998 998872 3334577777 554 2237
Q ss_pred EEecEEEecCCCChHhhhhhcCCC-CceEEE--EEEEEecCCcccccccCeeEEEecCCCCCCeEEEEEeCCCc-eEEEE
Q 012488 198 LEVDAVIGADGANSRVAKSINAGD-YDYAIA--FQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDH-VAVGT 273 (462)
Q Consensus 198 ~~adlvI~AdG~~S~vr~~l~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~-~~v~~ 273 (462)
++||+||+|||.+|.+|++++... ..+... +............ .+. .++.. .+.++.|++|.++. ..+..
T Consensus 150 ~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~---~~~g~~~~~~~~~~~~~~~~ 223 (394)
T 1k0i_A 150 LDCDYIAGCDGFHGISRQSIPAERLKVFERVYPFGWLGLLADTPPV-SHE--LIYAN---HPRGFALCSQRSATRSQYYV 223 (394)
T ss_dssp EECSEEEECCCTTCSTGGGSCGGGCEEEEEEEEEEEEEEEESSCCS-CSS--CEEEC---CTTCCEEEEEEETTEEEEEE
T ss_pred EEeCEEEECCCCCcHHHHhcCccccccccccccceeEEEecCCCCC-ccc--eEEEE---cCCceEEEEecCCCcEEEEE
Confidence 999999999999999999987642 112111 1111111110000 011 12221 24457777765433 33333
Q ss_pred EeccCC----CcHHHHHHHHHHhhhc----ccCCCeEEeEEeeecCCCCCCcccCCCEEEEccCCcCcccCCcccHHHHH
Q 012488 274 GTVTHK----GDIKKFQLATRNRAKD----KILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAA 345 (462)
Q Consensus 274 ~~~~~~----~~~~~~~~~~~~~~~~----~l~~~~~~~~~~~~i~~~~~~~~~~~~v~liGDAAh~~~P~~G~G~~~a~ 345 (462)
...... ...+.+.+.+.+.+.. .+...+......+++......+|..+|++|+|||||.++|++|||+|+||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~ai 303 (394)
T 1k0i_A 224 QVPLSEKVEDWSDERFWTELKARLPSEVAEKLVTGPSLEKSIAPLRSFVVEPMQHGRLFLAGDAAHIVPPTGAKGLNLAA 303 (394)
T ss_dssp EECTTCCGGGCCHHHHHHHHHHTSCHHHHHHCCCCCEEEEEEEEEEEEEEECSEETTEEECGGGTEECCGGGTCHHHHHH
T ss_pred EeCCCCCccccCHHHHHHHHHHhhCcccccccccCcceeeEEEEhhhhhccccccCCEEEEechhhcCCCcccchHHHHH
Confidence 322111 1123333333333222 22222333333344433344567789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCChhHHHHHHHHHHHhhhhHHHHHHHhHhhhc
Q 012488 346 KSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFY 397 (462)
Q Consensus 346 ~da~~la~~l~~a~~~~~~~~~~~~L~~y~~~~~~~~~~~~~~~~~~~~~~~ 397 (462)
+||..|++.|..+...+ ....|..|++.++............+..++.
T Consensus 304 ~da~~La~~L~~~~~~~----~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~ 351 (394)
T 1k0i_A 304 SDVSTLYRLLLKAYREG----RGELLERYSAICLRRIWKAERFSWWMTSVLH 351 (394)
T ss_dssp HHHHHHHHHHHHHHHHC----CGGGGGGHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhccC----chHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999998876543 3577888988887776666666655555555
No 11
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=100.00 E-value=1.2e-32 Score=284.69 Aligned_cols=400 Identities=17% Similarity=0.205 Sum_probs=241.9
Q ss_pred CCCccEEEECCchHHHHHHHHHHHC------CCcEEEEcCCCCCC--CCcccccCccccccCCCChhhHhc--c----c-
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKN------GVETFLIERKLDNC--KPCGGAIPLCMVGEFDLPLDIIDR--K----V- 112 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~------g~~v~v~E~~~~~~--~~~g~~i~~~~l~~~g~~~~~~~~--~----~- 112 (462)
.+++||+||||||+||++|+.|+++ |++|+||||.+... ..+|..+.+..++.+ + +.+... . +
T Consensus 33 ~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~l-l-~~~~~~g~~~~~~~~ 110 (584)
T 2gmh_A 33 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEEL-F-PDWKEKGAPLNTPVT 110 (584)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHH-C-TTHHHHTCCCCEECC
T ss_pred ccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHH-H-HHHHhcCCceeeeec
Confidence 4568999999999999999999999 99999999987322 245666665555443 2 112111 1 1
Q ss_pred -ceEEEEcCCCceEecc---C-cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEE-EEEecc
Q 012488 113 -TKMKMISPSNVAVDIG---Q-TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYV-LYYTEY 185 (462)
Q Consensus 113 -~~~~~~~~~~~~~~~~---~-~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~-v~~~~~ 185 (462)
..+.+....+ .+.+. . .... ...+.++|..|.++|.+.+++.|++|++++ |+++.. ++++.+. |.+.+.
T Consensus 111 ~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~--~~~g~V~gV~~~~~ 186 (584)
T 2gmh_A 111 EDRFGILTEKY-RIPVPILPGLPMNN-HGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILF--HEDGSVKGIATNDV 186 (584)
T ss_dssp EEEEEEECSSC-EEECCCCTTSTTCC-TTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEE--CTTSSEEEEEECCE
T ss_pred hhheeeeccCC-CccccccCcccccc-CCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEE--cCCCCEEEEEeCCc
Confidence 1233333322 22221 1 1111 113478999999999999999999999998 998873 3333443 666530
Q ss_pred CCccCCCCc-------eeEEEecEEEecCCCChHhhhhh----cCC---C-CceEEEEEEEEecCCcccccccCeeEEEe
Q 012488 186 DGTKGGVGE-------KRTLEVDAVIGADGANSRVAKSI----NAG---D-YDYAIAFQERVKIPDEKMVYYENLAEMYV 250 (462)
Q Consensus 186 ~~~~~~~~~-------~~~~~adlvI~AdG~~S~vr~~l----~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (462)
+ ....|+ +.+++||+||+|||.+|.+|+++ +.. . ..+...+...+.++... ..++...+++
T Consensus 187 g--~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~g~~~~~~v~~~~--~~~~~~~~~~ 262 (584)
T 2gmh_A 187 G--IQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKK--WKPGRVDHTV 262 (584)
T ss_dssp E--ECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEEEEEEEEECCGGG--CCTTEEEEEE
T ss_pred c--ccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHhhhhhheecCccc--ccCCeEEEEE
Confidence 0 001122 25899999999999999999887 332 1 12334444444444332 2234444444
Q ss_pred cCCCC--CCeEEEEEeCC---CceEEEEEeccCC-C----cHHHHHHHHH-HhhhcccCCCeEEeEEeeecC---CCCCC
Q 012488 251 GDDVS--PDFYGWVFPKC---DHVAVGTGTVTHK-G----DIKKFQLATR-NRAKDKILGGKIIRVEAHPIP---EHPRP 316 (462)
Q Consensus 251 ~~~~~--~~~~~w~~p~~---~~~~v~~~~~~~~-~----~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~i~---~~~~~ 316 (462)
+.... ..+..|++|.. +..+++.....+. . ..+.+.+... ..+.+.+.++++.......++ ....+
T Consensus 263 g~~~~~~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~l~~~~~~p~i~~~l~~~~~~~~~~~~~~~~~~~~~~ 342 (584)
T 2gmh_A 263 GWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNPYLSPFREFQRWKHHPSIKPTLEGGKRIAYGARALNEGGFQSIP 342 (584)
T ss_dssp ETTSCTTSCEEEEEEECCSSSCEEEEEEEEETTCCCTTCCHHHHHHHHTTSTTTHHHHTTCEEEEEEEEEEECCGGGGCC
T ss_pred eccccCCcCCceEEEEecCCCCeEEEEEEEecCcccccCChHHHHHHHHhChHHHHHhCCCeEEEecceEccCCCcccCC
Confidence 43211 11335666655 4456665543221 1 2233433322 124455655666555443332 23456
Q ss_pred cccCCCEEEEccCCcCcccCCcccHHHHHHHHHHHHHHHHHHhhcCC-CCCChhH---HHHHHHHHHHh-hhhHHHHHHH
Q 012488 317 RRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGT-RMIDEGD---LRKYLEKWDKT-YWPTYKVLDV 391 (462)
Q Consensus 317 ~~~~~~v~liGDAAh~~~P~~G~G~~~a~~da~~la~~l~~a~~~~~-~~~~~~~---L~~y~~~~~~~-~~~~~~~~~~ 391 (462)
+|..+|++|+|||||.++|+.|||+++||+||..||+.|..++..++ . ...+ |..|++.++.. ..+.+...+.
T Consensus 343 ~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~~~--~~~a~~~L~~Ye~~r~~~~v~~~l~~~r~ 420 (584)
T 2gmh_A 343 KLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENLQ--SKTIGLHVTEYEDNLKNSWVWKELYSVRN 420 (584)
T ss_dssp CCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCCC--CSSSSCCCTHHHHHHHTSHHHHHHHHTTT
T ss_pred ccccCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCCcc--hhhhhhhHHHHHHHHHHhHHHHHHHHHhC
Confidence 78889999999999999999999999999999999999999876542 1 1333 88999998877 5677777777
Q ss_pred hHhhhccC-chhHHH----HHHHhc---ccc-ccccChhhHhhhhhcC----CCChhHHHHHHHHhhhhhcccccCcccc
Q 012488 392 LQKVFYRS-NPAREA----FVEMCA---DEY-VQKMTFDSYLYKRVVP----GNPLEDLKLAVNTIGSLVRANALRREMD 458 (462)
Q Consensus 392 ~~~~~~~~-~~~~~~----~~~~~~---~~~-~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 458 (462)
+..++... ...... +..++. .++ +.....+..-.+.... .-|.-+-++.|+.+.+|+.+|+.|+++|
T Consensus 421 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (584)
T 2gmh_A 421 IRPSCHGILGVYGGMIYTGIFYWIFRGMEPWTLKHKGSDSDQLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQ 500 (584)
T ss_dssp TTGGGGSTTTHHHHHHHHHHHTTTTTTCCSCCCCCCSCGGGCCCCGGGSCCCCCCCCCSSSSCCHHHHHHTTTCBCCSSS
T ss_pred hhHHHHHhhccHHHHHHHHHHHHHcCCCCCCccCCCCCCchhhhhHHhcCCCCCCCccccccccccchhhhccccccCCC
Confidence 77777553 222222 222222 111 1100001111111111 2234445778999999999999999999
Q ss_pred C
Q 012488 459 K 459 (462)
Q Consensus 459 ~ 459 (462)
|
T Consensus 501 ~ 501 (584)
T 2gmh_A 501 P 501 (584)
T ss_dssp C
T ss_pred C
Confidence 5
No 12
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.2e-33 Score=280.37 Aligned_cols=328 Identities=16% Similarity=0.125 Sum_probs=215.5
Q ss_pred CCCCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCC-CCCcccccCc---cccccCCCChhhHhc--ccceEEEEc
Q 012488 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDN-CKPCGGAIPL---CMVGEFDLPLDIIDR--KVTKMKMIS 119 (462)
Q Consensus 46 ~~~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~-~~~~g~~i~~---~~l~~~g~~~~~~~~--~~~~~~~~~ 119 (462)
|+.+++||+||||||+|+++|+.|+++|++|+|+||++.. ...++..++. +.++++|+.+.+... ....+.++.
T Consensus 2 M~~~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 81 (399)
T 2x3n_A 2 MTDNHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVY 81 (399)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEE
T ss_pred CCCCcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEe
Confidence 4445689999999999999999999999999999998732 2344545543 467788887776532 233445555
Q ss_pred CCCceE-eccC-cccCCCeEEeeehHHHHHHHHHHHHHC-CCEEEcce-eEEEEecCCCCCCE--EEEEeccCCccCCCC
Q 012488 120 PSNVAV-DIGQ-TLKPHEYIGMVRREVLDAYLRERAEKN-GASVINGL-FMKMDLPRNFEQPY--VLYYTEYDGTKGGVG 193 (462)
Q Consensus 120 ~~~~~~-~~~~-~~~~~~~~~~v~r~~l~~~L~~~~~~~-gv~i~~~~-v~~~~~~~~~~~~~--~v~~~~~~~~~~~~~ 193 (462)
..+... .+.. ......+.+.++|..|.+.|.+.+++. |+++++++ |++++. +++.+ .|++.+|
T Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~---~~~~v~g~v~~~~g-------- 150 (399)
T 2x3n_A 82 HDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQR---DERHAIDQVRLNDG-------- 150 (399)
T ss_dssp ETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEE---CTTSCEEEEEETTS--------
T ss_pred CCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEE---cCCceEEEEEECCC--------
Confidence 555321 2211 111123345789999999999999998 89999987 999873 23456 7887776
Q ss_pred ceeEEEecEEEecCCCChHhhhhhcCCC-----CceE--EEEEEEEecCCcccccccCeeEEEecCCCCC-CeEEEEEeC
Q 012488 194 EKRTLEVDAVIGADGANSRVAKSINAGD-----YDYA--IAFQERVKIPDEKMVYYENLAEMYVGDDVSP-DFYGWVFPK 265 (462)
Q Consensus 194 ~~~~~~adlvI~AdG~~S~vr~~l~~~~-----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~p~ 265 (462)
.++++|+||+|||.+|.+|+.++... +... ..+... ++.. . +... .+++ + ++++|++|.
T Consensus 151 --~~~~ad~vV~AdG~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~--~~~~-~---~~~~-~~~~----~~~~~~~~~p~ 217 (399)
T 2x3n_A 151 --RVLRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFAL--APCV-A---ERNR-LYVD----SQGGLAYFYPI 217 (399)
T ss_dssp --CEEEEEEEEECCCTTCHHHHHTSCCCCCCCCCSSCEEEEEEEC--CHHH-H---HCEE-EEEC----TTSCEEEEEEE
T ss_pred --CEEECCEEEECCCCChHHHHHhCCCccccCCCCCCceEEEEEE--ecCC-C---CCcc-EEEc----CCCcEEEEEEc
Confidence 58999999999999999999997652 1112 333222 2211 1 1112 3332 4 568888887
Q ss_pred CCceEEEEEeccCC---------CcHHHHHHHHHHhhhccc-----CCCeEEeEEeeecCC-CCCCcccCCCEEEEccCC
Q 012488 266 CDHVAVGTGTVTHK---------GDIKKFQLATRNRAKDKI-----LGGKIIRVEAHPIPE-HPRPRRLSGRVALVGDAA 330 (462)
Q Consensus 266 ~~~~~v~~~~~~~~---------~~~~~~~~~~~~~~~~~l-----~~~~~~~~~~~~i~~-~~~~~~~~~~v~liGDAA 330 (462)
.+... ........ ...+++.+.+.. +.+.+ ......+...+++.. ...++|..+|++|+||||
T Consensus 218 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAA 295 (399)
T 2x3n_A 218 GFDRA-RLVVSFPREEARELMADTRGESLRRRLQR-FVGDESAEAIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAI 295 (399)
T ss_dssp TTTEE-EEEEECCHHHHHHHHHSTTSHHHHHHHHT-TCCGGGHHHHHTCCCSTTCEECCCCCEECSCSEETTEEECGGGT
T ss_pred CCCEE-EEEEEeCccccccccccCCHHHHHHHHhh-cCCcchhhHHhcCCccceEEechhhcccccccccCcEEEEechh
Confidence 76322 22110111 122333333332 11111 110000123345544 456678889999999999
Q ss_pred cCcccCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCChhHHHHHHHHHHHhhhhHHHHHHHhHhhhccCch
Q 012488 331 GYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNP 401 (462)
Q Consensus 331 h~~~P~~G~G~~~a~~da~~la~~l~~a~~~~~~~~~~~~L~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (462)
|.++|++|||+|+||+||..|++.|....+.+. .....|..|++.++............+.++++...+
T Consensus 296 h~~~P~~GqG~~~al~da~~La~~L~~~~~~~~--~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~ 364 (399)
T 2x3n_A 296 HNVHPITGQGMNLAIEDASALADALDLALRDAC--ALEDALAGYQAERFPVNQAIVSYGHALATSLEDRQR 364 (399)
T ss_dssp EECCGGGCCHHHHHHHHHHHHHHHHHHHHTTSS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred ccCCCcccccHHHHHHHHHHHHHHHHhhhcccc--hHHHHHHHHHHHhccHHHHHHHHHHHhhhhhcccCc
Confidence 999999999999999999999999998775432 126778889888888888888888888887776543
No 13
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=100.00 E-value=3.3e-32 Score=284.75 Aligned_cols=339 Identities=14% Similarity=0.137 Sum_probs=212.7
Q ss_pred CCccEEEECCchHHHHHHHHHHH-CCCcEEEEcCCCCC-CCCcccccC---ccccccCCCChhhHhcc--cceEEEEcCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAK-NGVETFLIERKLDN-CKPCGGAIP---LCMVGEFDLPLDIIDRK--VTKMKMISPS 121 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~-~g~~v~v~E~~~~~-~~~~g~~i~---~~~l~~~g~~~~~~~~~--~~~~~~~~~~ 121 (462)
.++||+||||||+||++|+.|++ .|++|+||||.+.. ...++.+++ .+.++++|+.+.+.... ...+.++.+.
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~ 110 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPD 110 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCC
Confidence 36899999999999999999999 99999999998732 233444554 34678889888776532 3344555532
Q ss_pred ----CceE---eccC--cccCCCeEEeeehHHHHHHHHHHHHHCCC--EEEcce-eEEEEecCC-CCCCEEEEEeccCCc
Q 012488 122 ----NVAV---DIGQ--TLKPHEYIGMVRREVLDAYLRERAEKNGA--SVINGL-FMKMDLPRN-FEQPYVLYYTEYDGT 188 (462)
Q Consensus 122 ----~~~~---~~~~--~~~~~~~~~~v~r~~l~~~L~~~~~~~gv--~i~~~~-v~~~~~~~~-~~~~~~v~~~~~~~~ 188 (462)
+... .+.. ..........++|..+++.|.+.+++.|+ +|++++ |++++...+ ++..+.|++.+.+
T Consensus 111 ~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~-- 188 (639)
T 2dkh_A 111 PGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCD-- 188 (639)
T ss_dssp TTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECS--
T ss_pred CCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEecc--
Confidence 2211 1110 01112234578999999999999999987 999988 999884221 1235888876510
Q ss_pred cCCCCceeEEEecEEEecCCCChHhhhhhcCCCC--ceEEEEEEEEec-CCcccccccCeeEEEecCCCCCCeEEEEEeC
Q 012488 189 KGGVGEKRTLEVDAVIGADGANSRVAKSINAGDY--DYAIAFQERVKI-PDEKMVYYENLAEMYVGDDVSPDFYGWVFPK 265 (462)
Q Consensus 189 ~~~~~~~~~~~adlvI~AdG~~S~vr~~l~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~ 265 (462)
....|...+++||+||+|||.+|.+|++++.... .+...| ..+.+ .............+.. +.+++|++|.
T Consensus 189 ~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~-----~~g~~~~~P~ 262 (639)
T 2dkh_A 189 AAHAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAW-GVMDVLAVTDFPDVRYKVAIQS-----EQGNVLIIPR 262 (639)
T ss_dssp GGGTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCE-EEEEEEEEECCTTTTSEEEEEE-----TTEEEEEEEC
T ss_pred ccCCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceE-EEEEEEEccCCCccceeEEEEc-----CCceEEEEEc
Confidence 0001444689999999999999999999986521 111111 00110 0000000011111111 4678899998
Q ss_pred CCc--eEEEEEecc---------CCCcHHHHHHHHHHhhhc-ccCCCeEEeEEeeecCCCCCCccc------------CC
Q 012488 266 CDH--VAVGTGTVT---------HKGDIKKFQLATRNRAKD-KILGGKIIRVEAHPIPEHPRPRRL------------SG 321 (462)
Q Consensus 266 ~~~--~~v~~~~~~---------~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~i~~~~~~~~~------------~~ 321 (462)
.+. ..+...... .....+++.+.+.+.+.+ .+.-..+.++..+.+......+|. .+
T Consensus 263 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~g 342 (639)
T 2dkh_A 263 EGGHLVRFYVEMDKLDADERVASRNITVEQLIATAQRVLHPYKLEVKNVPWWSVYEIGQRICAKYDDVVDAVATPDSPLP 342 (639)
T ss_dssp TTSSCEEEEEECC-----------CCCHHHHHHHHHHHHTTSCEEEEEEEEEEEECCCCEECSCSBSCCCSSCCTTSCCC
T ss_pred CCCcEEEEEEECCCcCcccccccCCCCHHHHHHHHHHHhCcccCcceeeeEEEecccccchhhhhhccccccccccCccC
Confidence 765 333322111 112345555555444432 111122233334444444455565 79
Q ss_pred CEEEEccCCcCcccCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCChhHHHHHHHHHHHhhhhHHHHHHHhHhhhcc
Q 012488 322 RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398 (462)
Q Consensus 322 ~v~liGDAAh~~~P~~G~G~~~a~~da~~la~~l~~a~~~~~~~~~~~~L~~y~~~~~~~~~~~~~~~~~~~~~~~~ 398 (462)
||+|+|||||.++|+.|||+|+||+||..|++.|...++.. ..+..|..|++.++......+.....+.+++..
T Consensus 343 RV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g~---a~~~lL~~Ye~eR~~~a~~~~~~s~~~~~~~~~ 416 (639)
T 2dkh_A 343 RVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQ---CAPELLHTYSSERQVVAQQLIDFDREWAKMFSD 416 (639)
T ss_dssp CEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTTS---BCGGGGHHHHHHHHHHHHHHHHHHHHSCC----
T ss_pred cEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcCC---CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999887542 356788899988888777777766666666654
No 14
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=100.00 E-value=2.3e-32 Score=273.08 Aligned_cols=320 Identities=16% Similarity=0.197 Sum_probs=200.4
Q ss_pred CCCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCcc---ccccCCCChhhHhcccc---eEEEEcC
Q 012488 47 TNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLC---MVGEFDLPLDIIDRKVT---KMKMISP 120 (462)
Q Consensus 47 ~~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~---~l~~~g~~~~~~~~~~~---~~~~~~~ 120 (462)
+.+++||+||||||+|+++|+.|+++|++|+|+|+.+.....+|..+.+. .++++|+.+.+...... +..+...
T Consensus 2 ~~~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 81 (421)
T 3nix_A 2 QREKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRG 81 (421)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEET
T ss_pred CCccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeC
Confidence 34568999999999999999999999999999999974444667776543 56778887776554322 2333322
Q ss_pred CCc-eEeccCcc-cCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeE
Q 012488 121 SNV-AVDIGQTL-KPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRT 197 (462)
Q Consensus 121 ~~~-~~~~~~~~-~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 197 (462)
... .+.+.... ......+.++|..|.+.|.+.+++.|++++.++ |+++.. +++.+.+.+... .|+..+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~---~~~~~~v~v~~~------~g~~~~ 152 (421)
T 3nix_A 82 KEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKF---FGTDSVTTIEDI------NGNKRE 152 (421)
T ss_dssp TEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEE---ETTEEEEEEEET------TSCEEE
T ss_pred CeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEE---eCCEEEEEEEcC------CCCEEE
Confidence 211 22332211 123445689999999999999999999999997 998874 223344444332 133348
Q ss_pred EEecEEEecCCCChHhhhhhcCCCC---ceEEEEEEEEecCCcccccccCeeEEEecCCCCCCeEEEEEeCCCc-eEEEE
Q 012488 198 LEVDAVIGADGANSRVAKSINAGDY---DYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDH-VAVGT 273 (462)
Q Consensus 198 ~~adlvI~AdG~~S~vr~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~-~~v~~ 273 (462)
++||+||+|||.+|.+++.++.... .....+...+........+.++...+++.. ..+.+|+|.+|..+. ..++.
T Consensus 153 ~~a~~vV~A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~P~~~~~~~vg~ 231 (421)
T 3nix_A 153 IEARFIIDASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRITAVV-HKPKVWIWVIPFSNGNTSVGF 231 (421)
T ss_dssp EEEEEEEECCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC----CCSEEEEEE-EETTEEEEEEECTTSEEEEEE
T ss_pred EEcCEEEECCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCccCCCCeEEEEEe-CCCCEEEEEEEECCCCEEEEE
Confidence 9999999999999999999876521 111222222221111111111222233222 235789999998875 45665
Q ss_pred EeccC-----CCcHHHHHHHHHHh---hhcccCCCeEE-eEEeeecCCCCCCcccCCCEEEEccCCcCcccCCcccHHHH
Q 012488 274 GTVTH-----KGDIKKFQLATRNR---AKDKILGGKII-RVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFA 344 (462)
Q Consensus 274 ~~~~~-----~~~~~~~~~~~~~~---~~~~l~~~~~~-~~~~~~i~~~~~~~~~~~~v~liGDAAh~~~P~~G~G~~~a 344 (462)
....+ ....+++.+.+... +.+.+...... .....+.......++..+|++++|||||+++|++|+|+++|
T Consensus 232 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P~~G~G~~~A 311 (421)
T 3nix_A 232 VGEPSYFDEYTGTPEERMRAMIANEGHIAERFKSEEFLFEPRTIEGYAISASKLYGDGFVLTGNATEFLDPIFSSGATFA 311 (421)
T ss_dssp EECHHHHTTSCSCHHHHHHHHHHTCTTTHHHHTTCCBSSCCEEEECCCBEESCSEETTEEECGGGTCBCCSTTCCHHHHH
T ss_pred EecHHHhhhcCCCHHHHHHHHHHhCcHHHHHHhcCccccCceeecccceeeeeeccCCEEEecccccccCCcccccHHHH
Confidence 54211 12333443333322 22223222211 22223333334556778999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCChhHHHHHHHHHHH
Q 012488 345 AKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDK 380 (462)
Q Consensus 345 ~~da~~la~~l~~a~~~~~~~~~~~~L~~y~~~~~~ 380 (462)
++||..|++.|.+.+..++ ...+..|.+.++.
T Consensus 312 ~~~a~~la~~l~~~~~~~~----~~~~~~y~~~~~~ 343 (421)
T 3nix_A 312 MESGSKGGKLAVQFLKGEE----VNWEKDFVEHMMQ 343 (421)
T ss_dssp HHHHHHHHHHHHHHHTTCC----CCHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCc----hhHHHHHHHHHHH
Confidence 9999999999999876543 2345555555544
No 15
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=100.00 E-value=5.3e-32 Score=278.58 Aligned_cols=330 Identities=15% Similarity=0.111 Sum_probs=207.2
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCC-CCCCcccccCc---cccccCCCChhhHhcccc-----eEEEEc
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIPL---CMVGEFDLPLDIIDRKVT-----KMKMIS 119 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~-~~~~~g~~i~~---~~l~~~g~~~~~~~~~~~-----~~~~~~ 119 (462)
+++||+||||||+||++|+.|+++|++|+||||.+. ....++.++.. +.++++|+.+.+...... ...+..
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 104 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVT 104 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEES
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEec
Confidence 468999999999999999999999999999999873 23345555543 457788888777654221 112222
Q ss_pred -CCCceE---eccCcc------cCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCc
Q 012488 120 -PSNVAV---DIGQTL------KPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGT 188 (462)
Q Consensus 120 -~~~~~~---~~~~~~------~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~ 188 (462)
..+..+ .+.... ........++|..+++.|.+.+++. |++++ |++++. +++.+++++.+.
T Consensus 105 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~---~~~~v~v~~~~~--- 175 (549)
T 2r0c_A 105 RVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQ---RDDHVRATITDL--- 175 (549)
T ss_dssp SBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEE---CSSCEEEEEEET---
T ss_pred cCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEE---eCCEEEEEEEEC---
Confidence 233221 111100 0111234789999999999999886 88888 999873 344588888762
Q ss_pred cCCCCceeEEEecEEEecCCCChHhhhhhcCCCC--ce-EEEEEEEEecCCcc--cccccCeeEEEecCCCCCC-eEEEE
Q 012488 189 KGGVGEKRTLEVDAVIGADGANSRVAKSINAGDY--DY-AIAFQERVKIPDEK--MVYYENLAEMYVGDDVSPD-FYGWV 262 (462)
Q Consensus 189 ~~~~~~~~~~~adlvI~AdG~~S~vr~~l~~~~~--~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~w~ 262 (462)
.+|+..+++||+||+|||.+|.+|++++.... .+ ...+...+..+... ....+....+++. ++ +++++
T Consensus 176 --~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~~~~~~ 249 (549)
T 2r0c_A 176 --RTGATRAVHARYLVACDGASSPTRKALGIDAPPRHRTQVFRNILFRAPELRSLLGERAALFFFLML----SSSLRFPL 249 (549)
T ss_dssp --TTCCEEEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEEEEEECTTHHHHHGGGCCSEEEEEE----ETTEEEEE
T ss_pred --CCCCEEEEEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEEEEEECCchHHhcCCCCceEEEEEC----CCCcEEEE
Confidence 12344689999999999999999999976521 11 11222223322110 0001111222222 23 56777
Q ss_pred EeCCCc--eEEEEEeccCCCcHHHHHHHHHHhhhcccCCCeEEeEEeeecCCCCCCcccCCCEEEEccCCcCcccCCccc
Q 012488 263 FPKCDH--VAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEG 340 (462)
Q Consensus 263 ~p~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~v~liGDAAh~~~P~~G~G 340 (462)
+|..+. +.+...........+++.+.+.+.+...+. .++.+...+++......+|..+||+|+|||||.++|+.|||
T Consensus 250 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG 328 (549)
T 2r0c_A 250 RALDGRGLYRLTVGVDDASKSTMDSFELVRRAVAFDTE-IEVLSDSEWHLTHRVADSFSAGRVFLTGDAAHTLSPSGGFG 328 (549)
T ss_dssp EESSSSSEEEEEEECSTTCCSCCCHHHHHHHHBCSCCC-CEEEEEEEEEECCEECSCSEETTEEECGGGTEECCCGGGHH
T ss_pred EEECCCcEEEEEecCCCCCCCHHHHHHHHHHHhCCCCc-eeEEEEecchhHhhhHHhhcCCcEEEEccccccCCCccCCc
Confidence 776543 222221111111223444455554433222 35556666777666778888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCChhHHHHHHHHHHHhhhhHHHHHHHhHhhhc
Q 012488 341 IYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFY 397 (462)
Q Consensus 341 ~~~a~~da~~la~~l~~a~~~~~~~~~~~~L~~y~~~~~~~~~~~~~~~~~~~~~~~ 397 (462)
+|+||+||..|++.|...++.. ..+..|..|+++++......+.......+++.
T Consensus 329 ~n~gi~DA~~La~~La~~l~g~---a~~~lL~~Y~~eR~~~a~~~~~~s~~~~~~~~ 382 (549)
T 2r0c_A 329 MNTGIGSAADLGWKLAATLRGW---AGPGLLATYEEERRPVAITSLEEANVNLRRTM 382 (549)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC---SCTTTTHHHHHHHHHHHHHHHHC---------
T ss_pred cccccHHHHHHHHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999887543 34677888888888777766665555555544
No 16
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=100.00 E-value=8.7e-32 Score=267.74 Aligned_cols=316 Identities=16% Similarity=0.144 Sum_probs=182.6
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCC-CCCCcccccC-----ccccccCCCChhhHhc--c----cceEEEE
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIP-----LCMVGEFDLPLDIIDR--K----VTKMKMI 118 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~-~~~~~g~~i~-----~~~l~~~g~~~~~~~~--~----~~~~~~~ 118 (462)
++|+||||||+||++|+.|+++|++|+||||.+. ....+|.++. .+.|+++|+.+.+... . .....+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 5899999999999999999999999999999873 3345676663 3467788876654321 1 1112233
Q ss_pred cCCCceEeccCc------ccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCC
Q 012488 119 SPSNVAVDIGQT------LKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGG 191 (462)
Q Consensus 119 ~~~~~~~~~~~~------~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~ 191 (462)
...+........ .........++|..|.+.|.+.+ +.+|++++ +++++ +.+++.++|++.||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~---~~~v~~~~~v~~~~--~~~~~~v~v~~~dG------ 150 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGL---ANTIQWNKTFVRYE--HIENGGIKIFFADG------ 150 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHHTTC---TTTEECSCCEEEEE--ECTTSCEEEEETTS------
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHHhhc---cceEEEEEEEEeee--EcCCCeEEEEECCC------
Confidence 333322211100 00111234688999999987654 45788888 98887 34556789999988
Q ss_pred CCceeEEEecEEEecCCCChHhhhhhcCCCCceE---EEEEEEEecCCccc-----ccccCeeEEEecCCCCCCe---EE
Q 012488 192 VGEKRTLEVDAVIGADGANSRVAKSINAGDYDYA---IAFQERVKIPDEKM-----VYYENLAEMYVGDDVSPDF---YG 260 (462)
Q Consensus 192 ~~~~~~~~adlvI~AdG~~S~vr~~l~~~~~~~~---~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~---~~ 260 (462)
.+++||+||+|||.+|.||++++....... ..+........... .+.......++.. .+.. ..
T Consensus 151 ----~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 224 (412)
T 4hb9_A 151 ----SHENVDVLVGADGSNSKVRKQYLPFIERFDVGVSMIIGRARLTPALTALLPQNFRDGTPNSIVPK--SPDWLFISM 224 (412)
T ss_dssp ----CEEEESEEEECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECCHHHHHHSCGGGTSSCCEEECCS--SSEEEEEEE
T ss_pred ----CEEEeeEEEECCCCCcchHHHhCCCccccccceeEEEEEEecchhhhcchhhhhccCCcceEeec--CCCcceeee
Confidence 789999999999999999999987633322 22222222221110 0001111111110 1111 12
Q ss_pred EEEeCCCc----------e--EEEEEeccC-C-----CcHHHHHHHHHHhh-------hcccC---CCeEEeEEeeecCC
Q 012488 261 WVFPKCDH----------V--AVGTGTVTH-K-----GDIKKFQLATRNRA-------KDKIL---GGKIIRVEAHPIPE 312 (462)
Q Consensus 261 w~~p~~~~----------~--~v~~~~~~~-~-----~~~~~~~~~~~~~~-------~~~l~---~~~~~~~~~~~i~~ 312 (462)
|..|.... . .+....... . ...+.+.+.+.+.+ .+.+. ...+..+.... .
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~li~~~~~~~~~~~~~~~--~ 302 (412)
T 4hb9_A 225 WRAPVNIHVEASLAEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMISWDPSLHTLVQQSDMENISPLHLRS--M 302 (412)
T ss_dssp EEEESCTTSCGGGCCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTTTSCHHHHHHHHTSCTTCCEEEEEEE--C
T ss_pred eecCCceeEEEeccCCCceEEEEEecccccccccccccchHHHHHHHHHHhccCChHHHHHHHhcccceeccchhcc--c
Confidence 33332211 0 011111110 1 11122333332221 11111 11222222222 2
Q ss_pred CCCCcccCCCEEEEccCCcCcccCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCChhHHHHHHHHHHHhhhhHHH
Q 012488 313 HPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYK 387 (462)
Q Consensus 313 ~~~~~~~~~~v~liGDAAh~~~P~~G~G~~~a~~da~~la~~l~~a~~~~~~~~~~~~L~~y~~~~~~~~~~~~~ 387 (462)
.+..+|..|||+|+|||||.++|+.|||+|+||+||..|++.|.......+ .....|..|++.++......+.
T Consensus 303 ~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~--~~~~aL~~Ye~~R~~~~~~~~~ 375 (412)
T 4hb9_A 303 PHLLPWKSSTVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVASGHE--ELVKAISDYEQQMRAYANEIVG 375 (412)
T ss_dssp CCCCCCCCCSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTTSS--CHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccCEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcCCc--CHHHHHHHHHHHHHHHHHHHHH
Confidence 245678899999999999999999999999999999999999998875543 2245676776666555444433
No 17
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=100.00 E-value=4.4e-31 Score=269.87 Aligned_cols=333 Identities=17% Similarity=0.186 Sum_probs=204.6
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCc----cccccCCCChhhHhcccceE---EEEc-
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPL----CMVGEFDLPLDIIDRKVTKM---KMIS- 119 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~----~~l~~~g~~~~~~~~~~~~~---~~~~- 119 (462)
.+++||+||||||+|+++|+.|+++|++|+|||+.+......|..+.+ ..++.+|+.+.+........ .+..
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~ 84 (512)
T 3e1t_A 5 PEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWG 84 (512)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECS
T ss_pred CccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEec
Confidence 446899999999999999999999999999999997433344544433 25677888776654432211 1111
Q ss_pred CCCc--eEeccC-cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCE-EEEEeccCCccCCCCc
Q 012488 120 PSNV--AVDIGQ-TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPY-VLYYTEYDGTKGGVGE 194 (462)
Q Consensus 120 ~~~~--~~~~~~-~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~ 194 (462)
.... .+.+.. ......+.+.++|..|.+.|.+.+++.|++++.++ |+++.. +++.+ .|.+.+. .|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~---~~~~v~gv~~~~~------dG~ 155 (512)
T 3e1t_A 85 KEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLF---EGERAVGVRYRNT------EGV 155 (512)
T ss_dssp SCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEE---ETTEEEEEEEECS------SSC
T ss_pred CCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEE---ECCEEEEEEEEeC------CCC
Confidence 1111 112211 11223445679999999999999999999999997 999883 23333 2454442 133
Q ss_pred eeEEEecEEEecCCCChHhhhhhcCCC---CceEEEEEEEEecCCcccccccCeeEEEecCCCCCCeEEEEEeCCCc-eE
Q 012488 195 KRTLEVDAVIGADGANSRVAKSINAGD---YDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDH-VA 270 (462)
Q Consensus 195 ~~~~~adlvI~AdG~~S~vr~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~-~~ 270 (462)
..+++||+||+|||.+|.+|++++... +.....+...+.................. .+.+|+|.+|..+. ..
T Consensus 156 ~~~i~ad~VI~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~----~~~G~~~~~Pl~~~~~~ 231 (512)
T 3e1t_A 156 ELMAHARFIVDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILSAA----FQDGWFWYIPLSDTLTS 231 (512)
T ss_dssp EEEEEEEEEEECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCSTTCTTSEEEEE----ETTEEEEEEECSSSEEE
T ss_pred EEEEEcCEEEECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCCCCCcCceEEEE----eCCceEEEEEeCCCeEE
Confidence 458999999999999999999996531 11233333333221111111111111111 24679999998875 45
Q ss_pred EEEEeccC-----CCcHH-HHHHHHHH--hhhcccCCCeEE------eEEeeecCCCCCCcccCCCEEEEccCCcCcccC
Q 012488 271 VGTGTVTH-----KGDIK-KFQLATRN--RAKDKILGGKII------RVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKC 336 (462)
Q Consensus 271 v~~~~~~~-----~~~~~-~~~~~~~~--~~~~~l~~~~~~------~~~~~~i~~~~~~~~~~~~v~liGDAAh~~~P~ 336 (462)
++...... ....+ .+.+.+.. .+.+.+...... .+...+....+..++..+|+++||||||+++|+
T Consensus 232 vg~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~~P~ 311 (512)
T 3e1t_A 232 VGAVVSREAAEAIKDGHEAALLRYIDRCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDPV 311 (512)
T ss_dssp EEEEEEHHHHTTTSSCHHHHHHHHHHTSHHHHHHHTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEECGGGTEECCST
T ss_pred EEEEecHHHhhhhcCCHHHHHHHHHHhCchHHHHHhcCccccccccccceeeccccccccccccCCEEEEechhhcCCCc
Confidence 55443211 11122 22222221 122222222111 011111111134566788999999999999999
Q ss_pred CcccHHHHHHHHHHHHHHHHHHhhcCCCCCChhHHHHHHHHHHHhhhhHHHHHHHhHhh
Q 012488 337 SGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKV 395 (462)
Q Consensus 337 ~G~G~~~a~~da~~la~~l~~a~~~~~~~~~~~~L~~y~~~~~~~~~~~~~~~~~~~~~ 395 (462)
+|||+++|++||..|++.|...+.... .....|..|++.++..+.........+..+
T Consensus 312 ~GqG~~~Al~dA~~La~~L~~~l~~~~--~~~~aL~~Ye~~~~~~~~~~~~~~~~~y~~ 368 (512)
T 3e1t_A 312 FSSGVHLATYSALLVARAINTCLAGEM--SEQRCFEEFERRYRREYGNFYQFLVAFYDM 368 (512)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHTTTCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHHHHHHcCCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999988765432 234678888888887776665555444433
No 18
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=100.00 E-value=5.5e-31 Score=260.92 Aligned_cols=323 Identities=18% Similarity=0.208 Sum_probs=191.7
Q ss_pred CCCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCccccc--C---ccccccCCCChhhHhcccceEEEEcC-
Q 012488 47 TNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAI--P---LCMVGEFDLPLDIIDRKVTKMKMISP- 120 (462)
Q Consensus 47 ~~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i--~---~~~l~~~g~~~~~~~~~~~~~~~~~~- 120 (462)
+.+++||+||||||+||++|+.|+++|++|+||||.+......|.++ + .+.|+++|+.+.........+.++..
T Consensus 2 ~~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 81 (397)
T 2vou_A 2 SPTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDAL 81 (397)
T ss_dssp CCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETT
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecC
Confidence 34568999999999999999999999999999999874323334433 3 34677888766222233445566665
Q ss_pred CCceEeccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEE
Q 012488 121 SNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLE 199 (462)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 199 (462)
.+..+.... .+. ..+.+..+.+.|.+.+ .|+++++++ |++++. +++.+.|++.+| .+++
T Consensus 82 ~g~~~~~~~--~~~---~~~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~---~~~~v~v~~~~g----------~~~~ 141 (397)
T 2vou_A 82 TGERVGSVP--ADW---RFTSYDSIYGGLYELF--GPERYHTSKCLVGLSQ---DSETVQMRFSDG----------TKAE 141 (397)
T ss_dssp TCCEEEEEE--CCC---CEEEHHHHHHHHHHHH--CSTTEETTCCEEEEEE---CSSCEEEEETTS----------CEEE
T ss_pred CCCcccccc--Ccc---cccCHHHHHHHHHHhC--CCcEEEcCCEEEEEEe---cCCEEEEEECCC----------CEEE
Confidence 554332110 111 1467888999998876 489999988 999973 344588888776 6899
Q ss_pred ecEEEecCCCChHhhhhhcCCC-CceE--EEEEEEEecCCcccc---cccCeeEEEecCC-------CC--------CCe
Q 012488 200 VDAVIGADGANSRVAKSINAGD-YDYA--IAFQERVKIPDEKMV---YYENLAEMYVGDD-------VS--------PDF 258 (462)
Q Consensus 200 adlvI~AdG~~S~vr~~l~~~~-~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-------~~--------~~~ 258 (462)
+|+||+|||.+|.+|++++ +. ..+. ..|...+........ .......++.+.+ .. ...
T Consensus 142 ad~vV~AdG~~S~vr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 220 (397)
T 2vou_A 142 ANWVIGADGGASVVRKRLL-GIEPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLLDDGHLIAYPIPGRENAESPRLN 220 (397)
T ss_dssp ESEEEECCCTTCHHHHHHH-CCCCEEEEEEEEEEEECTTSSCHHHHHHHTTEEEEEEETTEEEEEEEECCSSTTSCCEEE
T ss_pred CCEEEECCCcchhHHHHhc-cCCCCccceEEEEEEeeccccChhhhhhhcCceeEEecCCCEEEEEECCCCCCccceeEE
Confidence 9999999999999999998 42 2222 223332221111000 0001111222111 00 012
Q ss_pred EEEEEeCCCce---EE-----------EEEec-cCCCcHHHHHHHHHHh---hhcccCCCeEEeEEeeecCCCCCCcccC
Q 012488 259 YGWVFPKCDHV---AV-----------GTGTV-THKGDIKKFQLATRNR---AKDKILGGKIIRVEAHPIPEHPRPRRLS 320 (462)
Q Consensus 259 ~~w~~p~~~~~---~v-----------~~~~~-~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~i~~~~~~~~~~ 320 (462)
|+|++|..+.. .. ..... .....++++.+.+... +.+.+.... ....+++.....++|..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 298 (397)
T 2vou_A 221 FQWYWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHNLRQFHSKGESLFKPFRDLVLNAS--SPFVTVVADATVDRMVH 298 (397)
T ss_dssp EEEEEECCTTHHHHHHTBCTTSCBCSSEECGGGCCHHHHHHHHHHHTTSCHHHHHHHHHCS--SCEEEEEEEBCCSCSEE
T ss_pred EEEEecCCCccchhhhccCCCCcccccccCcccCCHHHHHHHHHHHHhhChHHHHHHhccC--CcceeeeeeecCCceec
Confidence 44555433210 00 00000 0001112222221111 111111110 01123343335567889
Q ss_pred CCEEEEccCCcCcccCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCChhHHHHHHHHHHHhhhhHHHHHHHhHhhhcc
Q 012488 321 GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398 (462)
Q Consensus 321 ~~v~liGDAAh~~~P~~G~G~~~a~~da~~la~~l~~a~~~~~~~~~~~~L~~y~~~~~~~~~~~~~~~~~~~~~~~~ 398 (462)
+|++|+|||||.++|+.|||+|+||+||..|++.|.. .. .....|..|++.++............+.+++..
T Consensus 299 grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~----~~--~~~~~L~~Ye~~R~~~~~~~~~~s~~~~~~~~~ 370 (397)
T 2vou_A 299 GRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTK----NH--DLRGSLQSWETRQLQQGHAYLNKVKKMASRLQH 370 (397)
T ss_dssp TTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHH----CS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhc----CC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999964 11 235677778777777766666666666665554
No 19
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=100.00 E-value=8.6e-31 Score=270.06 Aligned_cols=326 Identities=23% Similarity=0.256 Sum_probs=203.1
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCc---cccccCCCChhhHhcccc---eEEEEc-CCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPL---CMVGEFDLPLDIIDRKVT---KMKMIS-PSN 122 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~---~~l~~~g~~~~~~~~~~~---~~~~~~-~~~ 122 (462)
++||+||||||+|+++|+.|+++|++|+|||+.+......|..+.+ ..++.+|+.+.+...... ...+.. ...
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 102 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQ 102 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCC
Confidence 5899999999999999999999999999999997443445656643 357788887776554322 122221 111
Q ss_pred c--eEeccCccc---CCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCcee
Q 012488 123 V--AVDIGQTLK---PHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKR 196 (462)
Q Consensus 123 ~--~~~~~~~~~---~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 196 (462)
. ...+..... ...+.+.++|..|.+.|.+.+++.|++++.++ |+++.. ++++.+.|++.++ |+..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~--~~g~~~~V~~~~~-------G~~~ 173 (591)
T 3i3l_A 103 APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDL--SDPDRVVLTVRRG-------GESV 173 (591)
T ss_dssp CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEC--CSTTCEEEEEEET-------TEEE
T ss_pred ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEE--cCCCEEEEEEecC-------CceE
Confidence 1 112211111 22345689999999999999999999999997 999883 3345677877643 3446
Q ss_pred EEEecEEEecCCCChHhhhhhcCCCCce---EEEEEEEEecCCcccccccCeeEEEecCCCCCCeEEEEEeCCCce-EEE
Q 012488 197 TLEVDAVIGADGANSRVAKSINAGDYDY---AIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHV-AVG 272 (462)
Q Consensus 197 ~~~adlvI~AdG~~S~vr~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~~-~v~ 272 (462)
+++||+||+|||.+|.+|++++...+.. .......+................. ..+.+|.|.+|..+.. +++
T Consensus 174 ~i~AdlVV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~----~~~~G~~w~iPl~~~~~sv~ 249 (591)
T 3i3l_A 174 TVESDFVIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGTTYSI----TFEDGWVWMIPIKDDLYSVG 249 (591)
T ss_dssp EEEESEEEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTTCEEEE----EETTEEEEEEECSSSEEEEE
T ss_pred EEEcCEEEECCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCCceEEE----EcCCcEEEEEECCCCeEEEE
Confidence 8999999999999999999997653221 1111111111111001111111111 1256799999987654 455
Q ss_pred EEeccCCC------cHHHHHHHHHHh---hhcccCCCeE----EeEEeeecCCCCCCcccCCCEEEEccCCcCcccCCcc
Q 012488 273 TGTVTHKG------DIKKFQLATRNR---AKDKILGGKI----IRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGE 339 (462)
Q Consensus 273 ~~~~~~~~------~~~~~~~~~~~~---~~~~l~~~~~----~~~~~~~i~~~~~~~~~~~~v~liGDAAh~~~P~~G~ 339 (462)
........ ..+++.+.+... +.+.+..... .....+.. ...++..+|+++||||||+++|+.|+
T Consensus 250 ~~~~~~~~~~l~~~~~~~~~~~l~~~~p~l~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~rvvLIGDAAh~~~Pl~Gq 326 (591)
T 3i3l_A 250 LVVDRSKSAEVREQGADAFYSSTLAKCAKAMDILGGAEQVDEVRIVQDWSY---DTEVFSADRFFLCGDAACFTDPLFSQ 326 (591)
T ss_dssp EEEEGGGHHHHHHHCHHHHHHHHHTTCHHHHHHHTTCEECSCCEEEEEEEE---EESCSEETTEEECGGGTCBCCGGGCC
T ss_pred EEcCHHHHhhhccCCHHHHHHHHHHhCHHHHHHHhcCccccCceEeccccc---chhhcccCCEEEEccccccCCCcccc
Confidence 54322211 112222222221 1122222211 11111111 23566789999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHhhcCCCCCChhHHHHHHHHHHHhhhhHHHHHHHhH
Q 012488 340 GIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQ 393 (462)
Q Consensus 340 G~~~a~~da~~la~~l~~a~~~~~~~~~~~~L~~y~~~~~~~~~~~~~~~~~~~ 393 (462)
|+++|++||..|++.|..++..++ .....+..|++.++..+.........+.
T Consensus 327 GinlAl~dA~~LA~~L~~~l~~~~--~~~~al~~Y~~~~~~~~~~i~~~~~~~Y 378 (591)
T 3i3l_A 327 GVHLASQSAVSAAAAIDRITRHGD--EKDAVHAWYNRTYREAYEQYHQFLASFY 378 (591)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCGG--GHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCc--hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998876543 2345666777766666555444444333
No 20
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.98 E-value=2.2e-31 Score=262.18 Aligned_cols=311 Identities=19% Similarity=0.109 Sum_probs=191.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCC-CCCcccccC---ccccccCCCChhhHhc--ccceEEEEcCCCc
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDN-CKPCGGAIP---LCMVGEFDLPLDIIDR--KVTKMKMISPSNV 123 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~-~~~~g~~i~---~~~l~~~g~~~~~~~~--~~~~~~~~~~~~~ 123 (462)
.+||+||||||+|+++|+.|+++|++|+|||+.+.. ...++..++ .+.|+++|+.+.+... ....+.++.. +.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-g~ 89 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMH-NK 89 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEET-TE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeC-Cc
Confidence 479999999999999999999999999999998733 223343343 3467788887776543 2445566665 54
Q ss_pred eEeccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecE
Q 012488 124 AVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDA 202 (462)
Q Consensus 124 ~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adl 202 (462)
.+.... ..... ...++|..|.+.|.+.+++.|+++++++ |++++ . + . .|++.+| .++++|+
T Consensus 90 ~~~~~~-~~~~~-~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~--~--~-~-~v~~~~g----------~~~~ad~ 151 (379)
T 3alj_A 90 SVSKET-FNGLP-WRIMTRSHLHDALVNRARALGVDISVNSEAVAAD--P--V-G-RLTLQTG----------EVLEADL 151 (379)
T ss_dssp EEEEEC-GGGCC-EEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEE--T--T-T-EEEETTS----------CEEECSE
T ss_pred eeeecc-CCCCc-eEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEE--e--C-C-EEEECCC----------CEEEcCE
Confidence 322111 00112 4579999999999999999999999998 99987 2 2 3 6777666 6899999
Q ss_pred EEecCCCChHhhhhhcCCC---CceEEEEEEEEecCCc--ccccccCeeEEEecCCCCCCeEEEEEeCCCce-EEEEEec
Q 012488 203 VIGADGANSRVAKSINAGD---YDYAIAFQERVKIPDE--KMVYYENLAEMYVGDDVSPDFYGWVFPKCDHV-AVGTGTV 276 (462)
Q Consensus 203 vI~AdG~~S~vr~~l~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~~-~v~~~~~ 276 (462)
||+|||.+|.+|+.++... +.....+...+..... ...........+. -..+++++|++|..+.. .+.....
T Consensus 152 vV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~ 229 (379)
T 3alj_A 152 IVGADGVGSKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWN--FWPRVQRILYSPCNENELYLGLMAP 229 (379)
T ss_dssp EEECCCTTCHHHHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEEC--CSSSCCEEEEEECSSSEEEEEEEEC
T ss_pred EEECCCccHHHHHHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccce--EECCCCEEEEEECCCCcEEEEEEec
Confidence 9999999999999998642 1112223333332100 1110011222210 12356789999987764 3333322
Q ss_pred cC---CCcHHHHHHHHHHhhh---cccCCCeEEeEEeeecCC-CCCCcccCCCEEEEccCCcCcccCCcccHHHHHHHHH
Q 012488 277 TH---KGDIKKFQLATRNRAK---DKILGGKIIRVEAHPIPE-HPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGR 349 (462)
Q Consensus 277 ~~---~~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~~i~~-~~~~~~~~~~v~liGDAAh~~~P~~G~G~~~a~~da~ 349 (462)
.. ...+.+..+.+...+. +.+...+......+++.. .+.++|..+|++|+|||||.++|++|||+|+||+||.
T Consensus 230 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~ai~da~ 309 (379)
T 3alj_A 230 AADPRGSSVPIDLEVWVEMFPFLEPCLIEAAKLKTARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAF 309 (379)
T ss_dssp TTCTTTTCSSCCHHHHHHHCGGGHHHHHHHHTCTTCCEEEEEEEEESCSEETTEEECTHHHHCCCGGGSCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHhcCCchhccHHHHHhhCCccceEEecccccCCCCCcccCcEEEEEcccCCCCcchhhhHHHHHHHHH
Confidence 11 1111111111111111 111100000011112111 1245677899999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCChhHHHHHHHHHHHhhhhHHH
Q 012488 350 MCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYK 387 (462)
Q Consensus 350 ~la~~l~~a~~~~~~~~~~~~L~~y~~~~~~~~~~~~~ 387 (462)
.|++.|... + .....|..|++.++........
T Consensus 310 ~La~~L~~~---~---~~~~~l~~Y~~~r~~~~~~~~~ 341 (379)
T 3alj_A 310 SLSQDLEEG---S---SVEDALVAWETRIRPITDRCQA 341 (379)
T ss_dssp HHHHHTTSS---S---CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccc---c---CHHHHHHHHHHHHHHHHHHHHH
Confidence 999998541 1 1245666676666655554443
No 21
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.97 E-value=7.2e-30 Score=253.98 Aligned_cols=314 Identities=19% Similarity=0.219 Sum_probs=194.7
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCc-EEEEcCCCCC-CCCcccccC---ccccccCCCChhhHhc--ccceEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVE-TFLIERKLDN-CKPCGGAIP---LCMVGEFDLPLDIIDR--KVTKMKMISPSN 122 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~-v~v~E~~~~~-~~~~g~~i~---~~~l~~~g~~~~~~~~--~~~~~~~~~~~~ 122 (462)
++||+||||||+||++|+.|+++|++ |+||||.+.. ...+|..+. .+.|+++|+.+.+... ....+.+++..+
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g 83 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSG 83 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCC
Confidence 47999999999999999999999999 9999998732 222333333 3467888987777554 234556666655
Q ss_pred ceEec---cCcccCCCeEEeeehHHHHHHHHHHHHH-CC-CEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCcee
Q 012488 123 VAVDI---GQTLKPHEYIGMVRREVLDAYLRERAEK-NG-ASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKR 196 (462)
Q Consensus 123 ~~~~~---~~~~~~~~~~~~v~r~~l~~~L~~~~~~-~g-v~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 196 (462)
..+.. +...........++|..|.+.|.+.+++ .| +++++++ |+++.. ++.+.|++.+. .+|+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~----~~~v~v~~~~~-----~~g~~~ 154 (410)
T 3c96_A 84 ATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE----RDGRVLIGARD-----GHGKPQ 154 (410)
T ss_dssp CEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE----ETTEEEEEEEE-----TTSCEE
T ss_pred CEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec----CCccEEEEecC-----CCCCce
Confidence 43311 1000111113478999999999999987 36 5899888 998873 34588887761 013335
Q ss_pred EEEecEEEecCCCChHhhhhhcCCC--Cce--EEEEEEEEecCCcccccccCeeEEEecCCCCCCeEEEEEeCCC-----
Q 012488 197 TLEVDAVIGADGANSRVAKSINAGD--YDY--AIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCD----- 267 (462)
Q Consensus 197 ~~~adlvI~AdG~~S~vr~~l~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~----- 267 (462)
+++||+||+|||.+|.+|++++... ..+ ...|......+. +..+...++++. .+.+++|++|..+
T Consensus 155 ~~~ad~vV~AdG~~S~vR~~l~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~~ 228 (410)
T 3c96_A 155 ALGADVLVGADGIHSAVRAHLHPDQRPLSHGGITMWRGVTEFDR----FLDGKTMIVAND--EHWSRLVAYPISARHAAE 228 (410)
T ss_dssp EEEESEEEECCCTTCHHHHHHCTTCCCCEEEEEEEEEEEEEESC----CTTSSEEEEEEC--TTCCEEEEEECCHHHHTT
T ss_pred EEecCEEEECCCccchhHHHhcCCCCCCCcCCeeEEEeeccccc----ccCCCeEEEecC--CCCcEEEEEecCCcccCC
Confidence 7999999999999999999997542 222 222322222111 111222233332 1244677787642
Q ss_pred -ceEEEE--E-ec------------cCCCcHHHHHHHHHHh------hhcccCCCeEEeEEeeecCC-CCCCcccCCCEE
Q 012488 268 -HVAVGT--G-TV------------THKGDIKKFQLATRNR------AKDKILGGKIIRVEAHPIPE-HPRPRRLSGRVA 324 (462)
Q Consensus 268 -~~~v~~--~-~~------------~~~~~~~~~~~~~~~~------~~~~l~~~~~~~~~~~~i~~-~~~~~~~~~~v~ 324 (462)
...+.. . .. ......+++.+.+... +.+.+.... ....+++.. .+.++|..+|++
T Consensus 229 g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~grv~ 306 (410)
T 3c96_A 229 GKSLVNWVCMVPSAAVGQLDNEADWNRDGRLEDVLPFFADWDLGWFDIRDLLTRNQ--LILQYPMVDRDPLPHWGRGRIT 306 (410)
T ss_dssp TCEEEEEEEEEEHHHHCCCCSSCCTTCBCCHHHHHHHHTTCCBTTBCHHHHHHTCS--EEEEEEEEECCCCSCCCBTTEE
T ss_pred CCcEEEEEEEecCcccccCCCccccCCCCCHHHHHHHhcCCCCchhHHHHHHhcCc--ccceeecccCCCccccccCCEE
Confidence 122211 1 00 0012234454444321 111111111 122333322 345778889999
Q ss_pred EEccCCcCcccCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCChhHHHHHHHHHHHhhhhHH
Q 012488 325 LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTY 386 (462)
Q Consensus 325 liGDAAh~~~P~~G~G~~~a~~da~~la~~l~~a~~~~~~~~~~~~L~~y~~~~~~~~~~~~ 386 (462)
|+|||||.++|++|||+|+||+||..|++.|... + .....|..|++.++.......
T Consensus 307 LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~---~---~~~~~L~~Ye~~r~~~~~~~~ 362 (410)
T 3c96_A 307 LLGDAAHLMYPMGANGASQAILDGIELAAALARN---A---DVAAALREYEEARRPTANKII 362 (410)
T ss_dssp ECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHHC---S---SHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecccCCCCCccchhHHHHHHHHHHHHHHHhcc---C---CHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999762 1 235667777776665554433
No 22
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.97 E-value=6.5e-30 Score=253.30 Aligned_cols=314 Identities=17% Similarity=0.181 Sum_probs=188.4
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCC-CCCCcccccC------ccccccCCCChhhHhcc--cceEEEEc
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD-NCKPCGGAIP------LCMVGEFDLPLDIIDRK--VTKMKMIS 119 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~-~~~~~g~~i~------~~~l~~~g~~~~~~~~~--~~~~~~~~ 119 (462)
+++||+||||||+||++|+.|+++|++|+||||.+. ..+.+|+.+. .+.|+++|+.+.+.... ... .+++
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~-~~~~ 103 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGV-NIAD 103 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCE-EEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccce-EEEC
Confidence 458999999999999999999999999999999873 2334666542 34678889887775432 222 5555
Q ss_pred CCCceEeccC-cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeE
Q 012488 120 PSNVAVDIGQ-TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRT 197 (462)
Q Consensus 120 ~~~~~~~~~~-~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 197 (462)
..+....... ..........++|..|.+.|.+.+.+ +++++++ |++++. +++.+.|++.+| .+
T Consensus 104 ~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~---~~~~v~v~~~~g----------~~ 168 (398)
T 2xdo_A 104 EKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLEN--DTVIWDRKLVMLEP---GKKKWTLTFENK----------PS 168 (398)
T ss_dssp SSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCT--TSEEESCCEEEEEE---CSSSEEEEETTS----------CC
T ss_pred CCCCchhhccccccCCCCCceECHHHHHHHHHhhcCC--CEEEECCEEEEEEE---CCCEEEEEECCC----------cE
Confidence 5554321110 00011112258999999999987754 5788887 999883 234688888776 68
Q ss_pred EEecEEEecCCCChHhhhhhcCCCCceE--EEEEEEEecCCccc-----c-cccCeeEEEecCCCCCCeEEEEEeCCCc-
Q 012488 198 LEVDAVIGADGANSRVAKSINAGDYDYA--IAFQERVKIPDEKM-----V-YYENLAEMYVGDDVSPDFYGWVFPKCDH- 268 (462)
Q Consensus 198 ~~adlvI~AdG~~S~vr~~l~~~~~~~~--~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~w~~p~~~~- 268 (462)
+++|+||+|||.+|.+|++++.....+. ..+... ++.... . +.+....++++ ++..++.+|..+.
T Consensus 169 ~~ad~vV~AdG~~S~vR~~l~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~p~~~~~ 242 (398)
T 2xdo_A 169 ETADLVILANGGMSKVRKFVTDTEVEETGTFNIQAD--IHQPEINCPGFFQLCNGNRLMASH----QGNLLFANPNNNGA 242 (398)
T ss_dssp EEESEEEECSCTTCSCCTTTCCCCCEEEEEEEEEEE--ESSHHHHSHHHHHHHTTSEEEEEE----TTEEEEEEEEETTE
T ss_pred EecCEEEECCCcchhHHhhccCCCceEcceEEEEEE--eCchhccCchhHhhcCCceEEEec----CCCeEEEEeCCCCc
Confidence 9999999999999999999875433332 223222 221110 0 01111112222 2334444555443
Q ss_pred eEEEEEeccC----------CCcHHHHHHHHHHhh-------hcccC-CCeEEeEEeeecCCCCCCcccC-C--CEEEEc
Q 012488 269 VAVGTGTVTH----------KGDIKKFQLATRNRA-------KDKIL-GGKIIRVEAHPIPEHPRPRRLS-G--RVALVG 327 (462)
Q Consensus 269 ~~v~~~~~~~----------~~~~~~~~~~~~~~~-------~~~l~-~~~~~~~~~~~i~~~~~~~~~~-~--~v~liG 327 (462)
..+....... ....+.+.+.+.+.+ .+.+. ...+.....+.++. ..+|.. + |++|+|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~rv~LiG 320 (398)
T 2xdo_A 243 LHFGISFKTPDEWKNQTQVDFQNRNSVVDFLLKEFSDWDERYKELIHTTLSFVGLATRIFPL--EKPWKSKRPLPITMIG 320 (398)
T ss_dssp EEEEEEEECCTTC---CCSCTTCHHHHHHHHHHHTTTSCHHHHHHHHHCSCCEEEEEEECCC--CSCCCSCCSSCEEECT
T ss_pred EEEEEEEecCcccccccccCcCCHHHHHHHHHHHHcCCChHHHHHHhCcccceeeeeEeccC--CCCcccCCCccEEEEe
Confidence 2232221111 012233333333221 11111 11222222233332 234543 5 899999
Q ss_pred cCCcCcccCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCChhHHHHHHHHHHHhhhhHHHHHH
Q 012488 328 DAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLD 390 (462)
Q Consensus 328 DAAh~~~P~~G~G~~~a~~da~~la~~l~~a~~~~~~~~~~~~L~~y~~~~~~~~~~~~~~~~ 390 (462)
||||.++|+.|||+|+||+||..|++.|... +.+ ..+..|..|++.++...........
T Consensus 321 DAAh~~~P~~GqG~n~ai~Da~~La~~L~~~---~~~-~~~~~L~~Y~~~r~~~~~~~~~~s~ 379 (398)
T 2xdo_A 321 DAAHLMPPFAGQGVNSGLVDALILSDNLADG---KFN-SIEEAVKNYEQQMFIYGKEAQEEST 379 (398)
T ss_dssp HHHHCCCCTTSCSHHHHHHHHHHHHHHHHSC---CSS-SHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ehhccCCCccCccHHHHHHHHHHHHHHHHhc---cCc-hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999763 110 1356777777777666555544333
No 23
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.96 E-value=2.4e-28 Score=250.45 Aligned_cols=314 Identities=14% Similarity=0.092 Sum_probs=186.7
Q ss_pred CCCCCccEEEECCchHHHHHHHHHHH------------CCCcEEEEcCCCCCCCCcccccCc---cccccCCCChh--hH
Q 012488 46 LTNRNLRVAVIGGGPAGGAAAETLAK------------NGVETFLIERKLDNCKPCGGAIPL---CMVGEFDLPLD--II 108 (462)
Q Consensus 46 ~~~~~~dVvIVGgG~aGl~~A~~L~~------------~g~~v~v~E~~~~~~~~~g~~i~~---~~l~~~g~~~~--~~ 108 (462)
|....+||+||||||||+++|+.|++ .|++|+|||+........|.++.+ ..++.+|+.+. +.
T Consensus 3 m~~~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~~g~g~~~~p~~~~~l~~lGi~e~~~~~ 82 (526)
T 2pyx_A 3 MQKPITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVATIGVGEGTWPSMRSTLSKIGIDENDFIR 82 (526)
T ss_dssp GGSCCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCCCCSCEECCTHHHHHHHHHTCCHHHHHH
T ss_pred CCCCCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCCcceeeechHhHHHHHHHcCCCHHHHHH
Confidence 33346799999999999999999999 999999999976333334555543 35788899885 33
Q ss_pred hccc---ceEEEEcCCC-------ce--Eecc----------------------------------------------Cc
Q 012488 109 DRKV---TKMKMISPSN-------VA--VDIG----------------------------------------------QT 130 (462)
Q Consensus 109 ~~~~---~~~~~~~~~~-------~~--~~~~----------------------------------------------~~ 130 (462)
.... .++.+..... .. ..++ ..
T Consensus 83 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~~~~~~ 162 (526)
T 2pyx_A 83 QCDASFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSIVTAQY 162 (526)
T ss_dssp HTTCEEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCTTSCTT
T ss_pred HcCCEEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhhhcccc
Confidence 3211 1222322110 00 0000 00
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHH-CCCEEEcceeEEEEecCCCCCC-EEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEK-NGASVINGLFMKMDLPRNFEQP-YVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~-~gv~i~~~~v~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
.....+.+.++|..|.+.|.+.+++ .|++++.++|+++.. ++++. +.|.+.+| .+++||+||+|||
T Consensus 163 ~~~~~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~~v~~i~~--~~~g~~~~v~~~~g----------~~i~ad~vV~AdG 230 (526)
T 2pyx_A 163 HFQNNYGYHLNAAKFSQLLTEHCTQKLGVTHIRDHVSQIIN--NQHGDIEKLITKQN----------GEISGQLFIDCTG 230 (526)
T ss_dssp CCSSCCEEEECHHHHHHHHHHHHHHTSCCEEEECCEEEEEE--CTTSCEEEEEESSS----------CEEECSEEEECSG
T ss_pred CCCCCeeEEEcHHHHHHHHHHHHHhcCCCEEEEeEEEEEEe--cCCCcEEEEEECCC----------CEEEcCEEEECCC
Confidence 0112235679999999999999999 899999888888873 22332 34555554 4699999999999
Q ss_pred CChHh-hhhhcCCC--Cc----eEEEEEEEEecCCcccccccCeeEEEecCCCCCCeEEEEEeCCCceEEEEEeccCCCc
Q 012488 209 ANSRV-AKSINAGD--YD----YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGD 281 (462)
Q Consensus 209 ~~S~v-r~~l~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~~~v~~~~~~~~~~ 281 (462)
.+|.+ ++.++... +. ....+...+......... ....... ..+.+|.|.+|..+...++.........
T Consensus 231 ~~S~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~g~~~~~pl~~~~~~~~v~~~~~~~ 305 (526)
T 2pyx_A 231 AKSLLLGEHLQVPFLSQKSVLFNDRALAIQVPYSDANSPI-ASCTHST----AQPNGWIWDIGLPTRKGVGYVYSSSHTN 305 (526)
T ss_dssp GGCCCCCCCTCCCEEECHHHHCCCEEEEEEEECSSTTCCC-CSSEEEE----EETTEEEEEEECSSEEEEEEEECTTTCC
T ss_pred cchHHHHHHhCCCcccccccccCccEEEEEeeccCCCCCC-CCceeEE----ecCCCeEEEeeCCCceEEEEEecCCCCC
Confidence 99998 66666531 11 111121122222100001 1111111 1245799999988765444332211112
Q ss_pred HHHHHHHHHHhh---hcccCCCeEEeEEeeecCCCCCCcccCCCEEEEccCCcCcccCCcccHHHHHHHHHHHHHHHHHH
Q 012488 282 IKKFQLATRNRA---KDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEG 358 (462)
Q Consensus 282 ~~~~~~~~~~~~---~~~l~~~~~~~~~~~~i~~~~~~~~~~~~v~liGDAAh~~~P~~G~G~~~a~~da~~la~~l~~a 358 (462)
.++..+.+.+.+ .+.+... +....++......++..+|++++|||||+++|+.|||+++|++||..|++.|...
T Consensus 306 ~~~~~~~l~~~l~~~~~~l~~~---~~~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~~~ 382 (526)
T 2pyx_A 306 DIDAQKTLFNYLGVDGAAADKL---EPRQLAINPGYRAKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLPPN 382 (526)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHC---CCEEEECCCEEESCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCCSC
T ss_pred hHHHHHHHHHHHHhcCcccccC---CceEEecccCccccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhhhc
Confidence 222333333332 1112101 1122333333345667899999999999999999999999999999999877421
Q ss_pred hhcCCCCCChhHHHHHHHHHHHhhhh
Q 012488 359 SENGTRMIDEGDLRKYLEKWDKTYWP 384 (462)
Q Consensus 359 ~~~~~~~~~~~~L~~y~~~~~~~~~~ 384 (462)
. + ..+..+..|++.++..+..
T Consensus 383 ~---~--~~~~~l~~Y~~~~~~~~~~ 403 (526)
T 2pyx_A 383 R---M--VMDTISARVNERYQQHWQQ 403 (526)
T ss_dssp H---H--HHHHHHHHHHHHHHHHHHH
T ss_pred C---C--cCHHHHHHHHHHHHHHHHH
Confidence 0 0 1235566666665555443
No 24
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.96 E-value=2.5e-27 Score=242.39 Aligned_cols=314 Identities=14% Similarity=0.112 Sum_probs=187.2
Q ss_pred CCccEEEECCchHHHHHHHHHHH---CCCcEEEEcCCCCCCCCcccccCc---cccccCCCChh-hHhccc----ceEEE
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAK---NGVETFLIERKLDNCKPCGGAIPL---CMVGEFDLPLD-IIDRKV----TKMKM 117 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~---~g~~v~v~E~~~~~~~~~g~~i~~---~~l~~~g~~~~-~~~~~~----~~~~~ 117 (462)
|.+||+|||||++|+++|+.|++ .|++|+|||+.+......|.++.+ ..++.+|+.+. ++.... .+..+
T Consensus 1 m~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~~~~~~g~~~~~~~~~~l~~lgi~~~~~~~~~~~~~~~~~~~ 80 (511)
T 2weu_A 1 MIRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNVRRIGVGEATFSTVRHFFDYLGLDEREWLPRCAGGYKLGIRF 80 (511)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC-------CCEECCTTHHHHHHHHTCCHHHHHHHTTCEEECEEEE
T ss_pred CcceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCCCceeeccccCcchHHHHHHcCCCHHHHHHHcCCeEecccee
Confidence 35799999999999999999999 999999999986332233444432 35677788764 222211 11112
Q ss_pred Ec----------CCCc-----eEec-----------------------------------cCcc----c-----------
Q 012488 118 IS----------PSNV-----AVDI-----------------------------------GQTL----K----------- 132 (462)
Q Consensus 118 ~~----------~~~~-----~~~~-----------------------------------~~~~----~----------- 132 (462)
.. +.+. ...+ .... .
T Consensus 81 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 160 (511)
T 2weu_A 81 ENWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFASQVDESLGRSTLAEQ 160 (511)
T ss_dssp ESSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC------CCSCCGGGC
T ss_pred cCCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCccccccccccccccccC
Confidence 11 1110 0000 0000 0
Q ss_pred C--CCeEEeeehHHHHHHHHHHHHHCCCEEEcceeEEEEecCCCCC-CEEEEEeccCCccCCCCceeEEEecEEEecCCC
Q 012488 133 P--HEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQ-PYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGA 209 (462)
Q Consensus 133 ~--~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~v~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~ 209 (462)
. ..+.+.++|..|.+.|.+.+++.|++++.++|+++.. ++++ .+.|.+.+| .+++||+||+|||.
T Consensus 161 ~~~~~~~~~~~~~~l~~~L~~~a~~~gv~~~~~~v~~i~~--~~~~~~~~v~~~~g----------~~~~ad~vV~A~G~ 228 (511)
T 2weu_A 161 RAQFPYAYHFDADEVARYLSEYAIARGVRHVVDDVQHVGQ--DERGWISGVHTKQH----------GEISGDLFVDCTGF 228 (511)
T ss_dssp CSCCSCEEEECHHHHHHHHHHHHHHTTCEEEECCEEEEEE--CTTSCEEEEEESSS----------CEEECSEEEECCGG
T ss_pred cCCCCeeEEEcHHHHHHHHHHHHHHCCCEEEECeEeEEEE--cCCCCEEEEEECCC----------CEEEcCEEEECCCc
Confidence 1 3345689999999999999999999999888888873 2222 245666555 58999999999999
Q ss_pred ChHhhh-hhcCCC------CceEEEEEEEEecCCcccccccCeeEEEecCCCCCCeEEEEEeCCCceEEEEEeccCCCcH
Q 012488 210 NSRVAK-SINAGD------YDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDI 282 (462)
Q Consensus 210 ~S~vr~-~l~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~~~v~~~~~~~~~~~ 282 (462)
+|.+++ .++... ......+...+...... .. ....... ..+.+|.|.+|..+...++..........
T Consensus 229 ~S~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~----~~~~g~~~~~P~~~~~~~g~~~~~~~~~~ 302 (511)
T 2weu_A 229 RGLLINQTLGGRFQSFSDVLPNNRAVALRVPRENDE-DM-RPYTTAT----AMSAGWMWTIPLFKRDGNGYVYSDEFISP 302 (511)
T ss_dssp GCCCCCCCTCCCEEECTTTCCCCEEEEEEEECSSGG-GC-CSSEEEE----EETTEEEEEEECSSEEEEEEEECTTTSCH
T ss_pred chHHHHHHhCCCCccccccCcccceEEEEeccCCCC-CC-Ccceece----ecCCCcEEEEECCCceEEEEEECCCCCCH
Confidence 999854 445431 11111221122222110 01 1111111 23567999999888655554432222233
Q ss_pred HHHHHHHHHhhhcc--cCCCeEEeEEeeecCCCCCCcccCCCEEEEccCCcCcccCCcccHHHHHHHHHHHHHHHHHHhh
Q 012488 283 KKFQLATRNRAKDK--ILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSE 360 (462)
Q Consensus 283 ~~~~~~~~~~~~~~--l~~~~~~~~~~~~i~~~~~~~~~~~~v~liGDAAh~~~P~~G~G~~~a~~da~~la~~l~~a~~ 360 (462)
++..+.+.+.+... +.....+ ++.....+++..+|+++||||||+++|+.|+|+++|++||..|++.|..
T Consensus 303 ~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~--- 374 (511)
T 2weu_A 303 EEAERELRSTVAPGRDDLEANHI-----QMRIGRNERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPG--- 374 (511)
T ss_dssp HHHHHHHHHHHCTTCTTSCCEEE-----ECCCEEESCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCC---
T ss_pred HHHHHHHHHHhCcccccccceeE-----EeeccccccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhcc---
Confidence 34444444433221 2122222 2222233455679999999999999999999999999999999988752
Q ss_pred cCCCCCChhHHHHHHHHHHHhhhhHHHHHHH
Q 012488 361 NGTRMIDEGDLRKYLEKWDKTYWPTYKVLDV 391 (462)
Q Consensus 361 ~~~~~~~~~~L~~y~~~~~~~~~~~~~~~~~ 391 (462)
++ ..+..|..|++.++..+.........
T Consensus 375 -~~--~~~~~l~~Y~~~~~~~~~~~~~~~~~ 402 (511)
T 2weu_A 375 -ER--WDPVLISAYNERMAHMVDGVKEFLVL 402 (511)
T ss_dssp -TT--CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CC--CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 35678888888776665544443333
No 25
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.96 E-value=5.9e-27 Score=241.18 Aligned_cols=316 Identities=13% Similarity=0.140 Sum_probs=191.1
Q ss_pred CCCCCccEEEECCchHHHHHHHHHHH---CCCcEEEEcCCCCCCCCcccccC---cc-ccccCCCChh--hHhccc---c
Q 012488 46 LTNRNLRVAVIGGGPAGGAAAETLAK---NGVETFLIERKLDNCKPCGGAIP---LC-MVGEFDLPLD--IIDRKV---T 113 (462)
Q Consensus 46 ~~~~~~dVvIVGgG~aGl~~A~~L~~---~g~~v~v~E~~~~~~~~~g~~i~---~~-~l~~~g~~~~--~~~~~~---~ 113 (462)
|....+||+|||||++|+++|+.|++ .|++|+|||+.+......|.++. .. .++.+|+.+. +..... .
T Consensus 21 M~~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~~g~~~~p~~~~~~l~~lGi~~~~~~~~~~~~~~~ 100 (550)
T 2e4g_A 21 MSGKIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPTLGVGEATIPNLQTAFFDFLGIPEDEWMRECNASYKV 100 (550)
T ss_dssp CCSCCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCCCCCCCEECCTHHHHHTHHHHTCCHHHHHHHTTCEEEC
T ss_pred cCCCCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCCccceeeeechhHHHHHHHHhCCChHHHHHhcCCeEEE
Confidence 33346799999999999999999999 99999999997633333455553 34 6677888765 332211 1
Q ss_pred eEEEEcCCCc---------------e--Eecc-----------------------C-c----------c-----c-----
Q 012488 114 KMKMISPSNV---------------A--VDIG-----------------------Q-T----------L-----K----- 132 (462)
Q Consensus 114 ~~~~~~~~~~---------------~--~~~~-----------------------~-~----------~-----~----- 132 (462)
++.+...... . ..++ . . . .
T Consensus 101 g~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (550)
T 2e4g_A 101 AIKFINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSPRRLD 180 (550)
T ss_dssp EEEEESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCSBCTT
T ss_pred eeeEeecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhhHhhc
Confidence 2222211100 0 0111 0 0 0 0
Q ss_pred ---CCCeEEeeehHHHHHHHHHHHHHC-CCEEEcceeEEEEecCCCCC-CEEEEEeccCCccCCCCceeEEEecEEEecC
Q 012488 133 ---PHEYIGMVRREVLDAYLRERAEKN-GASVINGLFMKMDLPRNFEQ-PYVLYYTEYDGTKGGVGEKRTLEVDAVIGAD 207 (462)
Q Consensus 133 ---~~~~~~~v~r~~l~~~L~~~~~~~-gv~i~~~~v~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~adlvI~Ad 207 (462)
...+.+.+++..|.+.|.+.+++. |++++.+.|+++.. ++++ .+.|.+.+| .+++||+||+||
T Consensus 181 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~~V~~i~~--~~~g~~~~v~~~~G----------~~i~ad~vI~A~ 248 (550)
T 2e4g_A 181 GSKVTNYAWHFDAHLVADFLRRFATEKLGVRHVEDRVEHVQR--DANGNIESVRTATG----------RVFDADLFVDCS 248 (550)
T ss_dssp SCBCSCCEEEECHHHHHHHHHHHHHHHSCCEEEECCEEEEEE--CTTSCEEEEEETTS----------CEEECSEEEECC
T ss_pred CCCCCCcceEEcHHHHHHHHHHHHHhcCCcEEEECeEeEEEE--cCCCCEEEEEECCC----------CEEECCEEEECC
Confidence 133456799999999999999998 99999888888873 2222 245666555 689999999999
Q ss_pred CCChHh-hhhhcCCC--C----ceEEEEEEEEecCCcccccccCeeEEEecCCCCCCeEEEEEeCCCceEEEEEeccCCC
Q 012488 208 GANSRV-AKSINAGD--Y----DYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKG 280 (462)
Q Consensus 208 G~~S~v-r~~l~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~~~v~~~~~~~~~ 280 (462)
|.+|.+ ++.++... + .....+...+..........+ ..... ..+.+|.|.+|..+...++........
T Consensus 249 G~~S~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~g~~~~ipl~~~~~~g~v~~~~~~ 323 (550)
T 2e4g_A 249 GFRGLLINKAMEEPFLDMSDHLLNDSAVATQVPHDDDANGVEP-FTSAI----AMKSGWTWKIPMLGRFGTGYVYSSRFA 323 (550)
T ss_dssp GGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECCHHHHCCCS-SEEEE----ECSSEEEEEEECSSEEEEEEEECTTTS
T ss_pred CCchhhHHHHhCCCcccccccccccceEEEeecccCCcccCCC-ceeee----ecCCceEEEccCCCccceEEEEecCCC
Confidence 999998 55555431 1 111111111111110000111 11111 125679999998775544443322222
Q ss_pred cHHHHHHHHHHhhhcc--cCCCeEEeEEeeecCCCCCCcccCCCEEEEccCCcCcccCCcccHHHHHHHHHHHHHHHHHH
Q 012488 281 DIKKFQLATRNRAKDK--ILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEG 358 (462)
Q Consensus 281 ~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~i~~~~~~~~~~~~v~liGDAAh~~~P~~G~G~~~a~~da~~la~~l~~a 358 (462)
..++..+.+.+.+... +.....+ ++.....+++..+|+++||||||+++|+.|||+++|++||..|++.|..
T Consensus 324 ~~~~~~~~l~~~~~~~p~l~~~~~i-----~~~~~~~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~~- 397 (550)
T 2e4g_A 324 TEDEAVREFCEMWHLDPETQPLNRI-----RFRVGRNRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFPD- 397 (550)
T ss_dssp CHHHHHHHHHHHTTCCTTTSCCEEE-----ECCCEEESCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCCC-
T ss_pred ChHHHHHHHHHhhCcCcccCCCceE-----EecCCCccccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhccc-
Confidence 3334444444444322 2122221 2222234455678999999999999999999999999999999987742
Q ss_pred hhcCCCCCChhHHHHHHHHHHHhhhhHHHHH
Q 012488 359 SENGTRMIDEGDLRKYLEKWDKTYWPTYKVL 389 (462)
Q Consensus 359 ~~~~~~~~~~~~L~~y~~~~~~~~~~~~~~~ 389 (462)
++ ..+..|..|++.++..+.......
T Consensus 398 ---~~--~~~~~l~~Y~~~~~~~~~~i~~~~ 423 (550)
T 2e4g_A 398 ---KS--LNPVLTARFNREIETMFDDTRDFI 423 (550)
T ss_dssp ---TT--CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---cC--CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 456778888877766655444333
No 26
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.96 E-value=1.3e-27 Score=235.31 Aligned_cols=303 Identities=14% Similarity=0.046 Sum_probs=178.3
Q ss_pred ccEEEECCchHHHHHHHHHHHC--CCcEEEEcCCCCCCCCccccc--CccccccC---CCC-hh-hHhc--ccceEEEEc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKN--GVETFLIERKLDNCKPCGGAI--PLCMVGEF---DLP-LD-IIDR--KVTKMKMIS 119 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~--g~~v~v~E~~~~~~~~~g~~i--~~~~l~~~---g~~-~~-~~~~--~~~~~~~~~ 119 (462)
+||+||||||+||++|+.|+++ |++|+|+||++.. ...|.++ +...++.+ ++. +. +... ....+.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ-EVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVH 79 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT-CCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC-CcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEe
Confidence 4899999999999999999999 9999999998743 2334433 33333311 111 11 2111 122344444
Q ss_pred CCCceEeccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEE
Q 012488 120 PSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTL 198 (462)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 198 (462)
.+..+.. ........+.|..|.+.|.+.+++.|+++++++ |++++. . .++
T Consensus 80 -~g~~~~~----~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~----------------------~~~ 130 (381)
T 3c4a_A 80 -HNEPSLM----STGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGE--L----------------------PLA 130 (381)
T ss_dssp -SSSEEEC----CCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGG--C----------------------CGG
T ss_pred -CCeeEEe----cCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchh--c----------------------ccc
Confidence 3433321 101123478999999999999999999999987 766651 0 124
Q ss_pred EecEEEecCCCChHhhhhhc----CCCCceEEEEEEEEecCCcccccccCeeEEEecCCCCCCeEEE--EEeCCCce-EE
Q 012488 199 EVDAVIGADGANSRVAKSIN----AGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGW--VFPKCDHV-AV 271 (462)
Q Consensus 199 ~adlvI~AdG~~S~vr~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w--~~p~~~~~-~v 271 (462)
++|+||+|||.+|. |+.+. .....+...+......... +.. ..++. ..+.++.| .+|..+.. .+
T Consensus 131 ~ad~vV~AdG~~S~-R~~l~~~~g~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~--~~~~g~~~~~~~p~~~~~~~~ 201 (381)
T 3c4a_A 131 DYDLVVLANGVNHK-TAHFTEALVPQVDYGRNKYIWYGTSQLF-----DQM-NLVFR--THGKDIFIAHAYKYSDTMSTF 201 (381)
T ss_dssp GCSEEEECCGGGGG-TCCSSGGGCCCCEEEEEEEEEEEESSCC-----SSE-EEEEE--EETTEEEEEEEEECSSSCEEE
T ss_pred cCCEEEECCCCCch-HHhhhhhcCCCcccCCccEEEEecCCCC-----Ccc-eeeEe--eCCCcEEEEEEEEecCCeEEE
Confidence 68999999999999 98873 2211111111111111111 111 11111 11344544 47765543 22
Q ss_pred EEEecc------C--CCcHHHHHHHHHHhhhcccCCCeEEeE-E-eeecC-CCCCCcccCCCEEEEccCCcCcccCCccc
Q 012488 272 GTGTVT------H--KGDIKKFQLATRNRAKDKILGGKIIRV-E-AHPIP-EHPRPRRLSGRVALVGDAAGYVTKCSGEG 340 (462)
Q Consensus 272 ~~~~~~------~--~~~~~~~~~~~~~~~~~~l~~~~~~~~-~-~~~i~-~~~~~~~~~~~v~liGDAAh~~~P~~G~G 340 (462)
...... . ....+.+.+.+.+.+.......+++.. . .+++. ..+.++|..+|++|+|||||.++|+.|||
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG 281 (381)
T 3c4a_A 202 IVECSEETYARARLGEMSEEASAEYVAKVFQAELGGHGLVSQPGLGWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHG 281 (381)
T ss_dssp EEEECHHHHHHTTSSSSCHHHHHHHHHHHTHHHHTTCCCBCCTTTCSEEEEECCCSCSEETTEEECGGGTCCCCGGGCCH
T ss_pred EEECCccccccCCcccCChHHHHHHHHHHhcccCCCchhhcCCCcceeeeccccCCCcccCCEEEEEccccccCCCcccc
Confidence 222110 0 112223333343333222111111110 0 12221 23457788899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCChhHHHHHHHHHHHhhhhHHHHHHHhHhhhcc
Q 012488 341 IYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYR 398 (462)
Q Consensus 341 ~~~a~~da~~la~~l~~a~~~~~~~~~~~~L~~y~~~~~~~~~~~~~~~~~~~~~~~~ 398 (462)
+|+||+||..|++.|... . .....|..|++.++..........+.+.+++..
T Consensus 282 ~~~al~Da~~La~~L~~~---~---~~~~aL~~Y~~~r~~~~~~~~~~s~~~~~~~~~ 333 (381)
T 3c4a_A 282 TTMAVVVAQLLVKALCTE---D---GVPAALKRFEERALPLVQLFRGHADNSRVWFET 333 (381)
T ss_dssp HHHHHHHHHHHHHHHHHS---S---SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcc---c---cHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Confidence 999999999999999763 1 235678888888877777777766666655544
No 27
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.95 E-value=5.8e-27 Score=240.92 Aligned_cols=309 Identities=14% Similarity=0.093 Sum_probs=185.9
Q ss_pred CCccEEEECCchHHHHHHHHHHH---CCCcEEEEcCCCCCCCCcccccCc---c-ccccCCCChh-hHhcccc----eEE
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAK---NGVETFLIERKLDNCKPCGGAIPL---C-MVGEFDLPLD-IIDRKVT----KMK 116 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~---~g~~v~v~E~~~~~~~~~g~~i~~---~-~l~~~g~~~~-~~~~~~~----~~~ 116 (462)
..+||+|||||++|+++|+.|++ .|++|+|||+........|.++.+ . .++.+|+.+. ++..... ++.
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lG~~~~~~~~~~~~~~~~g~~ 83 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPRIGVGEATIPSLQKVFFDFLGIPEREWMPQVNGAFKAAIK 83 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCCCCSCEECCTHHHHHTHHHHTCCHHHHGGGGTCEEECEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCCcCCCcccchhHHHHHHHHhCCCHHHHHHhcCchhhCCcc
Confidence 45799999999999999999999 999999999976332233444432 3 5566777654 2222111 111
Q ss_pred EE---------------cCCCce-----Eecc-----C-----ccc-------------------------CCCeEEeee
Q 012488 117 MI---------------SPSNVA-----VDIG-----Q-----TLK-------------------------PHEYIGMVR 141 (462)
Q Consensus 117 ~~---------------~~~~~~-----~~~~-----~-----~~~-------------------------~~~~~~~v~ 141 (462)
+. .+.+.. ..+. . ... ...+.+.++
T Consensus 84 ~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~ 163 (538)
T 2aqj_A 84 FVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQMSHAWHFD 163 (538)
T ss_dssp EESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCSCCEEEEC
T ss_pred ccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCCCccEEEe
Confidence 21 111100 0000 0 000 123456899
Q ss_pred hHHHHHHHHHHHHHCCCEEEcceeEEEEecCCCCCC-EEEEEeccCCccCCCCceeEEEecEEEecCCCChHhhh-hhcC
Q 012488 142 REVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQP-YVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAK-SINA 219 (462)
Q Consensus 142 r~~l~~~L~~~~~~~gv~i~~~~v~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S~vr~-~l~~ 219 (462)
+..|.+.|.+.+++.|++++.++|+++.. ++++. +.|.+.+| .+++||+||+|||.+|.+|+ .++.
T Consensus 164 ~~~l~~~L~~~a~~~gv~~~~~~v~~i~~--~~~g~~~~v~~~~g----------~~i~ad~vV~A~G~~s~~~~~~lg~ 231 (538)
T 2aqj_A 164 AHLVADFLKRWAVERGVNRVVDEVVDVRL--NNRGYISNLLTKEG----------RTLEADLFIDCSGMRGLLINQALKE 231 (538)
T ss_dssp HHHHHHHHHHHHHHTTCEEEECCEEEEEE--CTTSCEEEEEETTS----------CEECCSEEEECCGGGCCCCCCCTCC
T ss_pred HHHHHHHHHHHHHHCCCEEEEeeEeEEEE--cCCCcEEEEEECCC----------cEEEeCEEEECCCCchhhHHHHhCC
Confidence 99999999999999999999888888873 22332 45666554 58999999999999999854 4443
Q ss_pred CC--Cc----eEEEEEEEEecCCcccccccCeeEEEecCCCCCCeEEEEEeCCCceEEEEEeccCCCcHHHHHHHHHHhh
Q 012488 220 GD--YD----YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRA 293 (462)
Q Consensus 220 ~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 293 (462)
.. +. ....+...+..........+ ..... ..+.+|.|.+|..+...++..........+...+.+.+.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~g~~~~~p~~~~~~~g~v~~~~~~~~~~~~~~l~~~~ 306 (538)
T 2aqj_A 232 PFIDMSDYLLCDSAVASAVPNDDARDGVEP-YTSSI----AMNSGWTWKIPMLGRFGSGYVFSSHFTSRDQATADFLKLW 306 (538)
T ss_dssp CEEECTTTCCCCEEEEEEEECCHHHHCCCS-SEEEE----ECSSEEEEEEEETTEEEEEEEECTTTSCHHHHHHHHHHHH
T ss_pred CccccccccccceEEEEecccCCcccCCCC-ceeee----ecCCceEEEecCCCceEEEEEEcCCCCChHHHHHHHHHHh
Confidence 21 11 11112111111110000111 11111 2356799999988865555443222222334444444433
Q ss_pred hc-ccCCCeEEeEEeeecCCCCCCcccCCCEEEEccCCcCcccCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCChhHHH
Q 012488 294 KD-KILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLR 372 (462)
Q Consensus 294 ~~-~l~~~~~~~~~~~~i~~~~~~~~~~~~v~liGDAAh~~~P~~G~G~~~a~~da~~la~~l~~a~~~~~~~~~~~~L~ 372 (462)
.. .+.... ..++.....+++..+|++++|||||+++|+.|+|+++|++||..|++.|. .++ .....|.
T Consensus 307 ~~~~~~~~~-----~~~~~~~~~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~----~~~--~~~~~l~ 375 (538)
T 2aqj_A 307 GLSDNQPLN-----QIKFRVGRNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFP----DTS--FDPRLSD 375 (538)
T ss_dssp TCCTTCCCE-----EEECCCEEESCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCC----BTT--CCHHHHH
T ss_pred cCCCCCCce-----EEeeccccccccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhh----ccC--CCHHHHH
Confidence 22 111111 22333333455678999999999999999999999999999999997764 222 3567788
Q ss_pred HHHHHHHHhhhhH
Q 012488 373 KYLEKWDKTYWPT 385 (462)
Q Consensus 373 ~y~~~~~~~~~~~ 385 (462)
.|++.++..+...
T Consensus 376 ~Y~~~~~~~~~~~ 388 (538)
T 2aqj_A 376 AFNAEIVHMFDDC 388 (538)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8887776655443
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.92 E-value=1.3e-23 Score=209.89 Aligned_cols=291 Identities=12% Similarity=0.073 Sum_probs=156.7
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCccccc-----C---ccccccCCC--ChhhHhcccceEEE
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAI-----P---LCMVGEFDL--PLDIIDRKVTKMKM 117 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i-----~---~~~l~~~g~--~~~~~~~~~~~~~~ 117 (462)
.|.+||+||||||+||++|+.|+++|++|+|||+++......|... . ...++.+|+ +... ...+.++.+
T Consensus 20 ~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~~-~~~~~~~~~ 98 (430)
T 3ihm_A 20 HMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNEWPSE-EFGYFGHYY 98 (430)
T ss_dssp ---CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCCSCHH-HHCEEEEEE
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhhhhhh-cccccceeE
Confidence 3567999999999999999999999999999999872212222211 1 112234443 2211 122334444
Q ss_pred EcCCCceEeccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEccee--EEEEecCCCCCCEEEEEeccCCccCCCCce
Q 012488 118 ISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLF--MKMDLPRNFEQPYVLYYTEYDGTKGGVGEK 195 (462)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~v--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 195 (462)
.......+.+.... ......+.+..+...|.+.+++.|++++...+ .+++ .
T Consensus 99 ~~~~~~~~~~~~~~--~~~~~~v~~~~l~~~L~~~~~~~Gv~v~~~~v~~~~l~--------------~----------- 151 (430)
T 3ihm_A 99 YVGGPQPMRFYGDL--KAPSRAVDYRLYQPMLMRALEARGGKFCYDAVSAEDLE--------------G----------- 151 (430)
T ss_dssp EECSSSCEEEEEEE--EEEEBEECHHHHHHHHHHHHHHTTCEEEECCCCGGGHH--------------H-----------
T ss_pred EECCCCccccchhc--CCcceeecHHHHHHHHHHHHHHcCCEEEEEecchhhhh--------------h-----------
Confidence 33322222221111 11234688999999999999999998876432 1111 0
Q ss_pred eEEEecEEEecCCCChHhhhhhcCC---CC---ceEEEEEEEEecCCcccccccCeeEEEecCCCCCCeEEEEEeC--C-
Q 012488 196 RTLEVDAVIGADGANSRVAKSINAG---DY---DYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPK--C- 266 (462)
Q Consensus 196 ~~~~adlvI~AdG~~S~vr~~l~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~--~- 266 (462)
....+|+||+|||.+|.++...... .+ ...........+.... +....+.+. ...+..|.+|. .
T Consensus 152 ~~~~ad~VV~AdG~~S~~~~~~~~~~~~~~~~p~r~~~~~~~~g~~~~~----~~~~~~~~~---~~~G~~~~~p~~~~~ 224 (430)
T 3ihm_A 152 LSEQYDLLVVCTGKYALGKVFEKQSENSPFEKPQRALCVGLFKGIKEAP----IRAVTMSFS---PGHGELIEIPTLSFN 224 (430)
T ss_dssp HHTTSSEEEECCCCTTGGGGSCBCGGGCCCSSCSSEEEEEEEESBCCCS----SCCEEEEEE---TTTEEEEEEEEEETT
T ss_pred hcccCCEEEECCCCcchHHhccCCCCCCcccCCCeeEEEEEEccCCCCC----cCeeeeeec---CCCcceEEecccCCC
Confidence 1235799999999999887433211 11 1112221111111111 111111111 12245566653 1
Q ss_pred CceEEEEE-ecc--------CC---CcHH----HHHHHHHHh---hhcccCCCe---------EEeEEeeecCCCCCCcc
Q 012488 267 DHVAVGTG-TVT--------HK---GDIK----KFQLATRNR---AKDKILGGK---------IIRVEAHPIPEHPRPRR 318 (462)
Q Consensus 267 ~~~~v~~~-~~~--------~~---~~~~----~~~~~~~~~---~~~~l~~~~---------~~~~~~~~i~~~~~~~~ 318 (462)
+...+.+. ... .. ...+ .+.+.+... +.+.+.... ......+++...+..+|
T Consensus 225 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 304 (430)
T 3ihm_A 225 GMSTALVLENHIGSDLEVLAHTKYDDDPRAFLDLMLEKLGKHHPSVAERIDPAEFDLANSSLDILQGGVVPAFRDGHATL 304 (430)
T ss_dssp EEEEEEEEEECTTSSSGGGGTSCTTTCHHHHHHHHHHHHHHHCHHHHTTBCTTTCEESSSTTSEEEECCCCEEBCSEEEC
T ss_pred cceEEEEEEecCCCcHHHhccccCCCCHHHHHHHHHHHHHHhCccHHHHHhhchhccccCccceeecceeeccccccccc
Confidence 11222111 111 11 1223 233333222 222232222 11112223223345677
Q ss_pred cCCCEEE-EccCCcCcccCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCChhHHHHHHHHHH
Q 012488 319 LSGRVAL-VGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWD 379 (462)
Q Consensus 319 ~~~~v~l-iGDAAh~~~P~~G~G~~~a~~da~~la~~l~~a~~~~~~~~~~~~L~~y~~~~~ 379 (462)
..+|++| +|||||.++|++|||+|+||+||..|++.|... + .....|..|...++
T Consensus 305 ~~~~~~ll~GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~---~---~~~~~~~~~~~~r~ 360 (430)
T 3ihm_A 305 NNGKTIIGLGDIQATVDPVLGQGANMASYAAWILGEEILAH---S---VYDLRFSEHLERRR 360 (430)
T ss_dssp TTSCEEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHC---S---CCSHHHHHHHHHHH
T ss_pred CCCCEEEEecCccccCCCchhhhHHHHHHHHHHHHHHHHhc---C---CHHHHHHHHHHHHH
Confidence 8889888 999999999999999999999999999999874 2 24577888876555
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.83 E-value=3.6e-20 Score=187.88 Aligned_cols=145 Identities=17% Similarity=0.134 Sum_probs=97.6
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCc---cccccCCCChhhHhcccceEEEEcCCCce
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPL---CMVGEFDLPLDIIDRKVTKMKMISPSNVA 124 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~---~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 124 (462)
.+.+||+||||||+|+++|+.|++.|++|+|||+.+.........+.. +.++.+|+++.. +.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~--------------~~- 154 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFY--------------GR- 154 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHC--------------TT-
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCcccc--------------cc-
Confidence 456899999999999999999999999999999987432111111211 223344432110 00
Q ss_pred EeccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEE
Q 012488 125 VDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAV 203 (462)
Q Consensus 125 ~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlv 203 (462)
+ .... ...+.+..+.+.|.+.+++.|++++.++ |+++.....+++.+.|++.+. ..|+..++++|+|
T Consensus 155 --~----~~~~-~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~-----~~g~~~~i~ad~V 222 (497)
T 2bry_A 155 --F----CTGT-LDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPN-----PPAQLASYEFDVL 222 (497)
T ss_dssp --T----TCTT-CCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESC-----CCHHHHTCCBSEE
T ss_pred --c----cccc-cccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEEC-----CCCCEEEEEcCEE
Confidence 0 0001 1247788999999999999999999987 998873211234567776431 0122247899999
Q ss_pred EecCCCChHhhhhhcC
Q 012488 204 IGADGANSRVAKSINA 219 (462)
Q Consensus 204 I~AdG~~S~vr~~l~~ 219 (462)
|+|||.+|.+|+..+.
T Consensus 223 V~A~G~~S~~r~~~~~ 238 (497)
T 2bry_A 223 ISAAGGKFVPEGFTIR 238 (497)
T ss_dssp EECCCTTCCCTTCEEE
T ss_pred EECCCCCcccccccch
Confidence 9999999999976654
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.74 E-value=4.5e-16 Score=149.97 Aligned_cols=284 Identities=16% Similarity=0.094 Sum_probs=141.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCC-ccc---c--c--CccccccCCC-ChhhHhc--ccceEEEE
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP-CGG---A--I--PLCMVGEFDL-PLDIIDR--KVTKMKMI 118 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~-~g~---~--i--~~~~l~~~g~-~~~~~~~--~~~~~~~~ 118 (462)
++||+|||||++|+++|+.|+++|++|+||||.+..... ... . + ....+..... ...+... .......+
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEW 81 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeec
Confidence 579999999999999999999999999999998632100 000 0 0 0001110000 0011110 00011111
Q ss_pred cCCCceEeccCcc--cCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCce
Q 012488 119 SPSNVAVDIGQTL--KPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEK 195 (462)
Q Consensus 119 ~~~~~~~~~~~~~--~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 195 (462)
... ......... ..........+..+..++...+ + |++|+.++ |+++.. +++.+.|++.+|
T Consensus 82 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~-g~~i~~~~~v~~i~~---~~~~~~v~~~~g---------- 145 (336)
T 1yvv_A 82 TPL-LYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-G-DMPVSFSCRITEVFR---GEEHWNLLDAEG---------- 145 (336)
T ss_dssp CCC-EEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-T-TCCEECSCCEEEEEE---CSSCEEEEETTS----------
T ss_pred ccc-ceeccCcccccCCCCCccEEcCccHHHHHHHHH-c-cCcEEecCEEEEEEE---eCCEEEEEeCCC----------
Confidence 100 000000000 0011111233333444333322 2 88999988 999983 344588887665
Q ss_pred eEE-EecEEEecCCCChHhhhhhcC-------CCCceEEEEEEEEecCCcccccccCeeEEEecCCCCCCeEEEEE----
Q 012488 196 RTL-EVDAVIGADGANSRVAKSINA-------GDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVF---- 263 (462)
Q Consensus 196 ~~~-~adlvI~AdG~~S~vr~~l~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~---- 263 (462)
... ++|+||+|+|.+|.+|..... ....|...+...+..+.... .....++... .+ ..|++
T Consensus 146 ~~~~~a~~vV~a~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~--~~~l~~~~~ 218 (336)
T 1yvv_A 146 QNHGPFSHVIIATPAPQASTLLAAAPKLASVVAGVKMDPTWAVALAFETPLQ---TPMQGCFVQD--SP--LDWLARNRS 218 (336)
T ss_dssp CEEEEESEEEECSCHHHHGGGGTTCHHHHHHHTTCCEEEEEEEEEEESSCCS---CCCCEEEECS--SS--EEEEEEGGG
T ss_pred cCccccCEEEEcCCHHHHHHhhccCHHHHHHHhhcCccceeEEEEEecCCCC---CCCCeEEeCC--Cc--eeEEEecCc
Confidence 344 599999999999988854221 23445444443333332211 1111222221 12 44543
Q ss_pred -eCCCc--eEEEEEec------cCCCcHHHHHHHHHHhhhcccCC----CeEEeEE--eeecCCCCC--Ccc--cCCCEE
Q 012488 264 -PKCDH--VAVGTGTV------THKGDIKKFQLATRNRAKDKILG----GKIIRVE--AHPIPEHPR--PRR--LSGRVA 324 (462)
Q Consensus 264 -p~~~~--~~v~~~~~------~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~--~~~i~~~~~--~~~--~~~~v~ 324 (462)
|..+. ..+-.... ....+.+++.+.+.+.+.+.+.. ....... .+.++.... ... ..+|++
T Consensus 219 ~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~~~~p~~~~~~rw~~a~~~~~~~~~~~~~~~~rl~ 298 (336)
T 1yvv_A 219 KPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCTMPAPVFSLAHRWLYARPAGAHEWGALSDADLGIY 298 (336)
T ss_dssp STTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSCCCCCSEEEEEEEEEEEESSCCCCSCEEETTTTEE
T ss_pred CCCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEccccCccCCCCCCCCCeeecCCCCEE
Confidence 32222 11111110 11223345555555544444321 1111111 122333221 111 348999
Q ss_pred EEccCCcCcccCCcccHHHHHHHHHHHHHHHHHHhhcC
Q 012488 325 LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENG 362 (462)
Q Consensus 325 liGDAAh~~~P~~G~G~~~a~~da~~la~~l~~a~~~~ 362 (462)
|+||++| |.|++.|+.++..+|+.|.+.+...
T Consensus 299 laGDa~~------g~gv~~a~~sg~~lA~~l~~~~~~~ 330 (336)
T 1yvv_A 299 VCGDWCL------SGRVEGAWLSGQEAARRLLEHLQLE 330 (336)
T ss_dssp ECCGGGT------TSSHHHHHHHHHHHHHHHHHHTTC-
T ss_pred EEecCCC------CCCHHHHHHHHHHHHHHHHHHhhhh
Confidence 9999996 4499999999999999999876543
No 31
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.61 E-value=1.7e-14 Score=141.42 Aligned_cols=185 Identities=14% Similarity=0.107 Sum_probs=105.8
Q ss_pred eeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCCChH-hhhh
Q 012488 139 MVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSR-VAKS 216 (462)
Q Consensus 139 ~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S~-vr~~ 216 (462)
.++...+.+.|.+.+++.|++++.++ |.++.. +++.+.|.+.+ .+++||.||.|+|.+|. +.+.
T Consensus 160 ~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~---~~~~~~v~~~~-----------g~~~a~~vV~A~G~~s~~l~~~ 225 (382)
T 1ryi_A 160 HVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVER---DGEALFIKTPS-----------GDVWANHVVVASGVWSGMFFKQ 225 (382)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEEETTCCCCEEEC---SSSSEEEEETT-----------EEEEEEEEEECCGGGTHHHHHH
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEE---ECCEEEEEcCC-----------ceEEcCEEEECCChhHHHHHHh
Confidence 46677899999999999999999987 998873 33446665433 27999999999999986 7777
Q ss_pred hcCCCCce-EEEEEEEEecCCcccccccCeeEEEecCCCCCCeEEEEEeCCCc-eEEEEEec---cCCC-c---HHHHHH
Q 012488 217 INAGDYDY-AIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDH-VAVGTGTV---THKG-D---IKKFQL 287 (462)
Q Consensus 217 l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~-~~v~~~~~---~~~~-~---~~~~~~ 287 (462)
++....-. .......+..+... ... .++. . +.|++|..+. ..+|.... .+.. . .+.+.+
T Consensus 226 ~~~~~~~~~~~g~~~~~~~~~~~---~~~---~~~~----~--~~~~~p~~~g~~~vG~~~~~~~~~~~~~~~~~~~l~~ 293 (382)
T 1ryi_A 226 LGLNNAFLPVKGECLSVWNDDIP---LTK---TLYH----D--HCYIVPRKSGRLVVGATMKPGDWSETPDLGGLESVMK 293 (382)
T ss_dssp TTCCCCCEEEEEEEEEEECCSSC---CCS---EEEE----T--TEEEEECTTSEEEEECCCEETCCCCSCCHHHHHHHHH
T ss_pred cCCCCceeccceEEEEECCCCCC---ccc---eEEc----C--CEEEEEcCCCeEEEeecccccCCCCCCCHHHHHHHHH
Confidence 66432111 11111112222111 111 1111 1 4677887554 44443211 1111 1 223333
Q ss_pred HHHHhhhcccCCCeEEeEEeeecCCCCCCcccCCCEEEEccCC-----cCcccCCcccHHHHHHHHHHHHHHHH
Q 012488 288 ATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAA-----GYVTKCSGEGIYFAAKSGRMCAEAII 356 (462)
Q Consensus 288 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~v~liGDAA-----h~~~P~~G~G~~~a~~da~~la~~l~ 356 (462)
.+.+.++. +.+.++........+. ..++..++|++. ....++.|.|+.+|...|..+++.|.
T Consensus 294 ~~~~~~p~-l~~~~~~~~w~g~~~~------t~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~ 360 (382)
T 1ryi_A 294 KAKTMLPA-IQNMKVDRFWAGLRPG------TKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIM 360 (382)
T ss_dssp HHHHHCGG-GGGSEEEEEEEEEEEE------CSSSCCEEEEETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHT
T ss_pred HHHHhCCC-cCCCceeeEEEEeccc------CCCCCcEeccCCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHh
Confidence 33333322 2223333222222221 235677788763 34678899999999999999998884
No 32
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.54 E-value=1e-12 Score=127.82 Aligned_cols=72 Identities=22% Similarity=0.266 Sum_probs=55.9
Q ss_pred eeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCCCh-Hhhhh
Q 012488 139 MVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANS-RVAKS 216 (462)
Q Consensus 139 ~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S-~vr~~ 216 (462)
.++...+.+.|.+.+++.|+++++++ |+++.. ++++.+.|.+.+| +..+++||.||.|+|.+| .+.+.
T Consensus 146 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~--~~~~~~~v~~~~g--------~~~~~~a~~VV~A~G~~s~~l~~~ 215 (369)
T 3dme_A 146 IVDSHALMLAYQGDAESDGAQLVFHTPLIAGRV--RPEGGFELDFGGA--------EPMTLSCRVLINAAGLHAPGLARR 215 (369)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEE--CTTSSEEEEECTT--------SCEEEEEEEEEECCGGGHHHHHHT
T ss_pred EECHHHHHHHHHHHHHHCCCEEECCCEEEEEEE--cCCceEEEEECCC--------ceeEEEeCEEEECCCcchHHHHHH
Confidence 46777899999999999999999887 999983 3333477766553 335899999999999999 46777
Q ss_pred h-cCC
Q 012488 217 I-NAG 220 (462)
Q Consensus 217 l-~~~ 220 (462)
+ +..
T Consensus 216 ~~g~~ 220 (369)
T 3dme_A 216 IEGIP 220 (369)
T ss_dssp EETSC
T ss_pred hcCCC
Confidence 6 543
No 33
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.54 E-value=7e-13 Score=129.94 Aligned_cols=191 Identities=12% Similarity=0.029 Sum_probs=102.6
Q ss_pred eeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEE-EEEeccCCccCCCCceeEEEecEEEecCCCCh-Hhhh
Q 012488 139 MVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYV-LYYTEYDGTKGGVGEKRTLEVDAVIGADGANS-RVAK 215 (462)
Q Consensus 139 ~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S-~vr~ 215 (462)
.++...+.+.|.+.+++.|++++.++ |+++.. +++.+. |.+.+ .+++||.||.|+|.+| .+.+
T Consensus 145 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~---~~~~v~gv~~~~-----------g~i~a~~VV~A~G~~s~~l~~ 210 (382)
T 1y56_B 145 KADPFEATTAFAVKAKEYGAKLLEYTEVKGFLI---ENNEIKGVKTNK-----------GIIKTGIVVNATNAWANLINA 210 (382)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEE---SSSBEEEEEETT-----------EEEECSEEEECCGGGHHHHHH
T ss_pred eECHHHHHHHHHHHHHHCCCEEECCceEEEEEE---ECCEEEEEEECC-----------cEEECCEEEECcchhHHHHHH
Confidence 46677889999999999999999987 999873 234455 65533 2799999999999998 4677
Q ss_pred hhcCC--CCceEEEEEEEEecCCcccccccCeeEEEecCCCCCCeEEEEEeCCCceEEEEE-ecc----CC-Cc---HHH
Q 012488 216 SINAG--DYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTG-TVT----HK-GD---IKK 284 (462)
Q Consensus 216 ~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~~~v~~~-~~~----~~-~~---~~~ 284 (462)
.++.. ..-....-.....-+... . ... ..++... ....|+.|..+...+|.+ ... +. .. .+.
T Consensus 211 ~~g~~~~~~~~~~~g~~~~~~~~~~--~-~~~-~~~~~~~---~~~~y~~p~~~g~~iG~~~~~~~~~~~~~~~~~~~~~ 283 (382)
T 1y56_B 211 MAGIKTKIPIEPYKHQAVITQPIKR--G-TIN-PMVISFK---YGHAYLTQTFHGGIIGGIGYEIGPTYDLTPTYEFLRE 283 (382)
T ss_dssp HHTCCSCCCCEEEEEEEEEECCCST--T-SSC-SEEEEST---TTTEEEECCSSSCCEEECSCCBSSCCCCCCCHHHHHH
T ss_pred HcCCCcCcCCCeeEeEEEEEccCCc--c-cCC-CeEEecC---CCeEEEEEeCCeEEEecCCCCCCCCCCCCCCHHHHHH
Confidence 66643 221111111111111111 0 010 1222111 013556676555445531 111 11 11 122
Q ss_pred HHHHHHHhhhcccCCCeEEeEEeeecCCCCCCcccCCCEEEEccCC-----cCcccCCcccHHHHHHHHHHHHHHHHH
Q 012488 285 FQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAA-----GYVTKCSGEGIYFAAKSGRMCAEAIIE 357 (462)
Q Consensus 285 ~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~v~liGDAA-----h~~~P~~G~G~~~a~~da~~la~~l~~ 357 (462)
+.+.+.+.++ .+.+.++........+.. .++..+||... .....+.|.|+.+|...|..+++.+..
T Consensus 284 l~~~~~~~~p-~l~~~~~~~~~~g~r~~t------~d~~p~ig~~~~~~~~~~~~G~~g~G~~~a~~~g~~la~~i~~ 354 (382)
T 1y56_B 284 VSYYFTKIIP-ALKNLLILRTWAGYYAKT------PDSNPAIGRIEELNDYYIAAGFSGHGFMMAPAVGEMVAELITK 354 (382)
T ss_dssp HHHHHHHHCG-GGGGSEEEEEEEEEEEEC------TTSCCEEEEESSSBTEEEEECCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCC-CcCCCCceEEEEeccccC------CCCCcEeccCCCCCCEEEEEecCcchHhhhHHHHHHHHHHHhC
Confidence 3333333332 233334433222222221 24555666654 233567889999999999888888764
No 34
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.52 E-value=3.3e-13 Score=125.53 Aligned_cols=36 Identities=31% Similarity=0.493 Sum_probs=33.3
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD 84 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~ 84 (462)
|.+||+|||||||||++|+.|+++|++|+||||.+.
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 568999999999999999999999999999999873
No 35
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.52 E-value=9.3e-13 Score=130.07 Aligned_cols=189 Identities=11% Similarity=0.054 Sum_probs=100.8
Q ss_pred eehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCCCh-Hhhhhh
Q 012488 140 VRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANS-RVAKSI 217 (462)
Q Consensus 140 v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S-~vr~~l 217 (462)
++...+.+.|.+.+++.|++++.++ |+++.. +++..+.|.+.+ .++++|.||.|+|.+| .+++.+
T Consensus 171 ~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~--~~~~~~~v~~~~-----------g~~~a~~vV~a~G~~s~~l~~~~ 237 (405)
T 2gag_B 171 AKHDHVAWAFARKANEMGVDIIQNCEVTGFIK--DGEKVTGVKTTR-----------GTIHAGKVALAGAGHSSVLAEMA 237 (405)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEECSCCEEEEEE--SSSBEEEEEETT-----------CCEEEEEEEECCGGGHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEE--eCCEEEEEEeCC-----------ceEECCEEEECCchhHHHHHHHc
Confidence 4556788899999999999999987 998873 222223454433 2689999999999998 688877
Q ss_pred cCCCCceEEEEEEEEecCCcccccccCeeEEEecCCCCCCeEEEEEeCCCc-eEEEEEecc----C-CCc---HHHHHHH
Q 012488 218 NAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDH-VAVGTGTVT----H-KGD---IKKFQLA 288 (462)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~-~~v~~~~~~----~-~~~---~~~~~~~ 288 (462)
+....... +...+.... .... .....+... ....|+.|..+. ..+|..... + ... .+.+.+.
T Consensus 238 g~~~~~~~--~~~~~~~~~-~~~~--~~~~~~~~~----~~~~y~~p~~~g~~~ig~~~~~~~~~~~~~~~~~~~~l~~~ 308 (405)
T 2gag_B 238 GFELPIQS--HPLQALVSE-LFEP--VHPTVVMSN----HIHVYVSQAHKGELVMGAGIDSYNGYGQRGAFHVIQEQMAA 308 (405)
T ss_dssp TCCCCEEE--EEEEEEEEE-EBCS--CCCSEEEET----TTTEEEEECTTSEEEEEEEECSSCCCSSCCCTHHHHHHHHH
T ss_pred CCCCCccc--cceeEEEec-CCcc--ccCceEEeC----CCcEEEEEcCCCcEEEEeccCCCCccccCCCHHHHHHHHHH
Confidence 65422111 111111100 0000 001112211 124566775443 445543321 1 111 2233333
Q ss_pred HHHhhhcccCCCeEEeEEeeecCCCCCCcccCCCEEEEccCC----cCcccCCcccHHHHHHHHHHHHHHHHH
Q 012488 289 TRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAA----GYVTKCSGEGIYFAAKSGRMCAEAIIE 357 (462)
Q Consensus 289 ~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~v~liGDAA----h~~~P~~G~G~~~a~~da~~la~~l~~ 357 (462)
+.+.++ .+.+.++........+ ...++..++|++. .....+.|.|+..|...|..+++.|..
T Consensus 309 ~~~~~p-~l~~~~~~~~w~g~~~------~t~d~~p~ig~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~g 374 (405)
T 2gag_B 309 AVELFP-IFARAHVLRTWGGIVD------TTMDASPIISKTPIQNLYVNCGWGTGGFKGTPGAGFTLAHTIAN 374 (405)
T ss_dssp HHHHCG-GGGGCEECEEEEEEEE------EETTSCCEEEECSSBTEEEEECCGGGCSTTHHHHHHHHHHHHHH
T ss_pred HHHhCC-ccccCCcceEEeeccc------cCCCCCCEecccCCCCEEEEecCCCchhhHHHHHHHHHHHHHhC
Confidence 333332 2222333322222121 1346788889864 223445677888888888888877754
No 36
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.49 E-value=9.1e-12 Score=122.21 Aligned_cols=66 Identities=21% Similarity=0.203 Sum_probs=50.9
Q ss_pred eeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCCChH-hhhh
Q 012488 139 MVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSR-VAKS 216 (462)
Q Consensus 139 ~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S~-vr~~ 216 (462)
.++...+.+.|.+.+++.|++++.++ |++++. +++.+.|.+.+ .+++||.||.|+|.+|. +.+.
T Consensus 146 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~---~~~~~~v~~~~-----------g~~~a~~vV~A~G~~~~~l~~~ 211 (389)
T 2gf3_A 146 VLFSENCIRAYRELAEARGAKVLTHTRVEDFDI---SPDSVKIETAN-----------GSYTADKLIVSMGAWNSKLLSK 211 (389)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEE---CSSCEEEEETT-----------EEEEEEEEEECCGGGHHHHGGG
T ss_pred EEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEe---cCCeEEEEeCC-----------CEEEeCEEEEecCccHHHHhhh
Confidence 46677888999999999999999887 999873 23346665533 36999999999999875 5555
Q ss_pred hc
Q 012488 217 IN 218 (462)
Q Consensus 217 l~ 218 (462)
++
T Consensus 212 ~g 213 (389)
T 2gf3_A 212 LN 213 (389)
T ss_dssp GT
T ss_pred hc
Confidence 54
No 37
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.45 E-value=4.9e-12 Score=110.16 Aligned_cols=116 Identities=20% Similarity=0.277 Sum_probs=83.7
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
+||+|||||++|+.+|..|++.|.+|+|+|+.+...... ..+..+ .+ +
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~------~~~~~~-------------------~~----~--- 49 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGV------SRVPNY-------------------PG----L--- 49 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTC------SCCCCS-------------------TT----C---
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCc------hhhhcc-------------------CC----C---
Confidence 699999999999999999999999999999986211000 000000 00 0
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcceeEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCCC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGAN 210 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~ 210 (462)
+. .+....+.+.+.+.+++.|++++.+.|++++. +++.+.+.+.+ .++++|.||.|+|.+
T Consensus 50 --~~----~~~~~~~~~~l~~~~~~~gv~v~~~~v~~i~~---~~~~~~v~~~~-----------g~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 50 --LD----EPSGEELLRRLEAHARRYGAEVRPGVVKGVRD---MGGVFEVETEE-----------GVEKAERLLLCTHKD 109 (180)
T ss_dssp --TT----CCCHHHHHHHHHHHHHHTTCEEEECCCCEEEE---CSSSEEEECSS-----------CEEEEEEEEECCTTC
T ss_pred --cC----CCCHHHHHHHHHHHHHHcCCEEEeCEEEEEEE---cCCEEEEEECC-----------CEEEECEEEECCCCC
Confidence 00 13456788899999999999999878888873 23346665533 279999999999999
Q ss_pred hHhhhhhc
Q 012488 211 SRVAKSIN 218 (462)
Q Consensus 211 S~vr~~l~ 218 (462)
+.+++.++
T Consensus 110 ~~~~~~~g 117 (180)
T 2ywl_A 110 PTLPSLLG 117 (180)
T ss_dssp CHHHHHHT
T ss_pred CCccccCC
Confidence 98877775
No 38
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.45 E-value=3.9e-12 Score=124.41 Aligned_cols=68 Identities=10% Similarity=0.140 Sum_probs=53.4
Q ss_pred eeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCCCh-Hhhhh
Q 012488 139 MVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANS-RVAKS 216 (462)
Q Consensus 139 ~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S-~vr~~ 216 (462)
.++...+...|.+.+++.|++++.++ |+++.. +++.+.|.+.+ .+++||.||.|+|.+| .+.+.
T Consensus 150 ~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~---~~~~~~V~t~~-----------g~i~a~~VV~A~G~~s~~l~~~ 215 (381)
T 3nyc_A 150 DIDTDALHQGYLRGIRRNQGQVLCNHEALEIRR---VDGAWEVRCDA-----------GSYRAAVLVNAAGAWCDAIAGL 215 (381)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEESSCCCCEEEE---ETTEEEEECSS-----------EEEEESEEEECCGGGHHHHHHH
T ss_pred eECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEE---eCCeEEEEeCC-----------CEEEcCEEEECCChhHHHHHHH
Confidence 56778899999999999999999887 998873 23346665443 3799999999999998 46777
Q ss_pred hcCC
Q 012488 217 INAG 220 (462)
Q Consensus 217 l~~~ 220 (462)
++..
T Consensus 216 ~g~~ 219 (381)
T 3nyc_A 216 AGVR 219 (381)
T ss_dssp HTCC
T ss_pred hCCC
Confidence 7654
No 39
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.44 E-value=5e-12 Score=128.37 Aligned_cols=205 Identities=12% Similarity=0.087 Sum_probs=110.7
Q ss_pred eeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCCChH-hhhh
Q 012488 139 MVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSR-VAKS 216 (462)
Q Consensus 139 ~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S~-vr~~ 216 (462)
.++...+...|.+.+++.|++++.++ |+++.. + ++.+.|.+.+. .+|+..+++||.||.|+|.+|. +++.
T Consensus 145 ~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~--~-~~~~~V~~~d~-----~~G~~~~i~A~~VV~AtG~~s~~l~~~ 216 (501)
T 2qcu_A 145 WVDDARLVLANAQMVVRKGGEVLTRTRATSARR--E-NGLWIVEAEDI-----DTGKKYSWQARGLVNATGPWVKQFFDD 216 (501)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSEEEEEEEE--E-TTEEEEEEEET-----TTCCEEEEEESCEEECCGGGHHHHHHH
T ss_pred EEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEE--e-CCEEEEEEEEC-----CCCCEEEEECCEEEECCChhHHHHHHH
Confidence 46788899999999999999999887 998873 2 24456666531 1133358999999999999996 5554
Q ss_pred -hcCCC-Cc--eEEEEEEEEecCCcccccccCeeEEEecCCCCCCeEEEEEeCCCc-eEEEEEecc---C---C----Cc
Q 012488 217 -INAGD-YD--YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDH-VAVGTGTVT---H---K----GD 281 (462)
Q Consensus 217 -l~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~-~~v~~~~~~---~---~----~~ 281 (462)
++... .. ..-.....+. . ... .... +++. ..++..+|++|..++ ..+|..... + . ..
T Consensus 217 ~l~~~~~~~i~p~rG~~~~~~--~-~~~--~~~~-~~~~--~~dg~~~~~~P~~~g~~~iG~t~~~~~~~~~~~~~~~~~ 288 (501)
T 2qcu_A 217 GMHLPSPYGIRLIKGSHIVVP--R-VHT--QKQA-YILQ--NEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESE 288 (501)
T ss_dssp HTCCCCSSCBCCEEEEEEEEE--C-SSS--CSCE-EEEE--CTTSCEEEEEEETTTEEEEECCCEECCSCGGGCCCCHHH
T ss_pred hccCCcccccccceeEEEEEC--C-CCC--CceE-EEee--cCCCCEEEEEEcCCCcEEEcCCCCCCCCCcCCCCCCHHH
Confidence 44321 11 1111111111 1 111 1111 2222 123447888897754 345533211 1 1 11
Q ss_pred HHHHHHHHHHhhhcccCCCeEEeEEe--eecCCCCCC---cccCCCEEE--EccCCcCcccCCcccHHHHHHHHHHHHHH
Q 012488 282 IKKFQLATRNRAKDKILGGKIIRVEA--HPIPEHPRP---RRLSGRVAL--VGDAAGYVTKCSGEGIYFAAKSGRMCAEA 354 (462)
Q Consensus 282 ~~~~~~~~~~~~~~~l~~~~~~~~~~--~~i~~~~~~---~~~~~~v~l--iGDAAh~~~P~~G~G~~~a~~da~~la~~ 354 (462)
.+.+.+...+.++..+...++..... .|......+ ....+.++. .+|..+.+-..+|.|+.++-.-|..+++.
T Consensus 289 ~~~l~~~~~~~~p~~l~~~~v~~~~aG~Rp~~~d~~p~~~~~~~~~~i~~~~~~~~~gl~~i~Gg~~t~~~~~Ae~~~~~ 368 (501)
T 2qcu_A 289 INYLLNVYNTHFKKQLSRDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEK 368 (501)
T ss_dssp HHHHHHHHHHHBSSCCCGGGCCEEEEEEECCBCCCCSSGGGSCCCCEEEEEEETTEEEEEEEECCCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCcccEEEEEEEEeeecCCCCCccccCcCceEEEecccCCCCCeEEEeCccccchHHHHHHHHHH
Confidence 22333444444431233333333222 233221111 223355666 57666667777888888877777777777
Q ss_pred HHHHh
Q 012488 355 IIEGS 359 (462)
Q Consensus 355 l~~a~ 359 (462)
+.+.+
T Consensus 369 ~~~~~ 373 (501)
T 2qcu_A 369 LTPYY 373 (501)
T ss_dssp HGGGS
T ss_pred HHHhh
Confidence 76654
No 40
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.43 E-value=4.8e-13 Score=132.19 Aligned_cols=149 Identities=13% Similarity=0.154 Sum_probs=85.2
Q ss_pred CCCCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCC---ccccc--------Ccc-ccccC-CCChhhHhcc-
Q 012488 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP---CGGAI--------PLC-MVGEF-DLPLDIIDRK- 111 (462)
Q Consensus 46 ~~~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~---~g~~i--------~~~-~l~~~-g~~~~~~~~~- 111 (462)
|..+++||+|||||++|+++|+.|+++|++|+|+|+.+..... .|++. ... .+... ..........
T Consensus 23 M~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~ 102 (417)
T 3v76_A 23 MVAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYR 102 (417)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSC
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcC
Confidence 4455789999999999999999999999999999998742211 11111 000 00000 0001100000
Q ss_pred -cceEEEEcCCCceEeccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCcc
Q 012488 112 -VTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTK 189 (462)
Q Consensus 112 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~ 189 (462)
...+.+....+...... ..........+..+.+.|.+.+++.|++++.++ |+++.. +++.+.|.+.+
T Consensus 103 ~~~~~~~~~~~Gi~~~~~---~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~---~~~~~~V~~~~----- 171 (417)
T 3v76_A 103 PQDFVALVERHGIGWHEK---TLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVER---TASGFRVTTSA----- 171 (417)
T ss_dssp HHHHHHHHHHTTCCEEEC---STTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEE---ETTEEEEEETT-----
T ss_pred HHHHHHHHHHcCCCcEEe---eCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEE---eCCEEEEEECC-----
Confidence 00000000011111110 011111124567888999999999999999988 998873 23346666544
Q ss_pred CCCCceeEEEecEEEecCCCCh
Q 012488 190 GGVGEKRTLEVDAVIGADGANS 211 (462)
Q Consensus 190 ~~~~~~~~~~adlvI~AdG~~S 211 (462)
.+++||.||.|+|.+|
T Consensus 172 ------g~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 172 ------GTVDAASLVVASGGKS 187 (417)
T ss_dssp ------EEEEESEEEECCCCSS
T ss_pred ------cEEEeeEEEECCCCcc
Confidence 2799999999999998
No 41
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.41 E-value=1.9e-13 Score=136.91 Aligned_cols=159 Identities=18% Similarity=0.185 Sum_probs=92.8
Q ss_pred CCCCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCC---Cccccc---C-c----cccccCCCChhhHhcccce
Q 012488 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCK---PCGGAI---P-L----CMVGEFDLPLDIIDRKVTK 114 (462)
Q Consensus 46 ~~~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~---~~g~~i---~-~----~~l~~~g~~~~~~~~~~~~ 114 (462)
+..+++||+|||||++|+++|+.|+++|++|+|+||.+.... ..|++. . . ..+..++....+....+..
T Consensus 22 ~~~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (447)
T 2i0z_A 22 SNAMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSI 101 (447)
T ss_dssp ---CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHH
T ss_pred CccCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHh
Confidence 456679999999999999999999999999999999873211 011111 0 0 1111111111110000000
Q ss_pred ------EEEEcCCCceEeccCcccCCCeEE--eeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEecc
Q 012488 115 ------MKMISPSNVAVDIGQTLKPHEYIG--MVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEY 185 (462)
Q Consensus 115 ------~~~~~~~~~~~~~~~~~~~~~~~~--~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~ 185 (462)
+.+....+..+.. ....... ......+.+.|.+.+++.|++++.++ |+++.. +++..+.|.+.+|
T Consensus 102 ~~~~~~~~~~~~~G~~~~~----~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~--~~~~v~~V~~~~G 175 (447)
T 2i0z_A 102 FNNEDIITFFENLGVKLKE----EDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEY--ENGQTKAVILQTG 175 (447)
T ss_dssp SCHHHHHHHHHHTTCCEEE----CGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEE--ETTEEEEEEETTC
T ss_pred cCHHHHHHHHHhcCCceEE----eeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEe--cCCcEEEEEECCC
Confidence 0000001111100 0001100 01246788899999999999999888 998873 2222256666554
Q ss_pred CCccCCCCceeEEEecEEEecCCCCh-----------HhhhhhcCC
Q 012488 186 DGTKGGVGEKRTLEVDAVIGADGANS-----------RVAKSINAG 220 (462)
Q Consensus 186 ~~~~~~~~~~~~~~adlvI~AdG~~S-----------~vr~~l~~~ 220 (462)
.+++||.||.|+|.+| .+++.++..
T Consensus 176 ----------~~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~ 211 (447)
T 2i0z_A 176 ----------EVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHT 211 (447)
T ss_dssp ----------CEEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCC
T ss_pred ----------CEEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCC
Confidence 5799999999999999 788888765
No 42
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.41 E-value=1.9e-11 Score=120.36 Aligned_cols=67 Identities=16% Similarity=0.074 Sum_probs=51.3
Q ss_pred eeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCCCh-Hhhhh
Q 012488 139 MVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANS-RVAKS 216 (462)
Q Consensus 139 ~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S-~vr~~ 216 (462)
.++...+.+.|.+.+++.|++++.++ |+++.. +++.+.|...+ .+++||.||.|+|.+| .+++.
T Consensus 149 ~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~---~~~~v~v~t~~-----------g~i~a~~VV~A~G~~s~~l~~~ 214 (397)
T 2oln_A 149 TIDVRGTLAALFTLAQAAGATLRAGETVTELVP---DADGVSVTTDR-----------GTYRAGKVVLACGPYTNDLLEP 214 (397)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEE---ETTEEEEEESS-----------CEEEEEEEEECCGGGHHHHHGG
T ss_pred EEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEE---cCCeEEEEECC-----------CEEEcCEEEEcCCcChHHHhhh
Confidence 46667788889999999999999887 998873 23346554422 3799999999999985 57777
Q ss_pred hcC
Q 012488 217 INA 219 (462)
Q Consensus 217 l~~ 219 (462)
++.
T Consensus 215 ~g~ 217 (397)
T 2oln_A 215 LGA 217 (397)
T ss_dssp GTC
T ss_pred cCC
Confidence 764
No 43
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.39 E-value=3.9e-11 Score=123.24 Aligned_cols=209 Identities=12% Similarity=0.109 Sum_probs=109.3
Q ss_pred eeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCCCh-Hhhhh
Q 012488 139 MVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANS-RVAKS 216 (462)
Q Consensus 139 ~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S-~vr~~ 216 (462)
.++...|...|.+.+++.|++++.++ |+++.. +.+..+.|.+.+. .+|+..+++|+.||.|+|.+| .+++.
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~--~~g~v~gV~~~d~-----~tg~~~~i~A~~VV~AaG~~s~~l~~~ 238 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGAVALNYMKVESFIY--DQGKVVGVVAKDR-----LTDTTHTIYAKKVVNAAGPWVDTLREK 238 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEE--ETTEEEEEEEEET-----TTCCEEEEEEEEEEECCGGGHHHHHHT
T ss_pred eEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEE--cCCeEEEEEEEEc-----CCCceEEEECCEEEECCCcchHHHHHh
Confidence 46677888999999999999999987 999873 2222234666652 235557899999999999999 57777
Q ss_pred hcCCCCceEEEEEE-EEecCCcccccccCeeEEEecCCCCCCeEEEEEeCCCceEEEEEec---cC---CC----cHHHH
Q 012488 217 INAGDYDYAIAFQE-RVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV---TH---KG----DIKKF 285 (462)
Q Consensus 217 l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~~~v~~~~~---~~---~~----~~~~~ 285 (462)
++..........+. .+.++.... +....+++... ..+..+|++|..+...+|.... .+ .. .++.+
T Consensus 239 ~g~~~~~~v~p~kG~~lvl~~~~~---~~~~~~~~~~~-~dgr~v~~iP~~g~~~iGtT~~~~~~~~~~~~~t~~~i~~l 314 (561)
T 3da1_A 239 DRSKHGKYLKLSKGVHLVVDQSRF---PLRQAVYFDTE-SDGRMIFAIPREGKTYIGTTDTFYDKDIASPRMTVEDRDYI 314 (561)
T ss_dssp TTCCCSSEEEEEEEEEEEEEGGGS---CCSSEEEECCS-SSCCCEEEEEETTEEEECCCCEEECSCTTCCCCCHHHHHHH
T ss_pred cCCCCCceEEeccEEEEEECCccC---CCceEEEeccC-CCCcEEEEEecCCCEEEcCCCCccCCCcCCCCCCHHHHHHH
Confidence 76542111111221 122221111 11112333221 2233567788865555553321 11 11 12334
Q ss_pred HHHHHHhhhcc-cCCCeEEeEEe--eecCCCC---CCcccCCCEEEEccCCcCcccCCcccHHHHHHHHHHHHHHHHHHh
Q 012488 286 QLATRNRAKDK-ILGGKIIRVEA--HPIPEHP---RPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGS 359 (462)
Q Consensus 286 ~~~~~~~~~~~-l~~~~~~~~~~--~~i~~~~---~~~~~~~~v~liGDAAh~~~P~~G~G~~~a~~da~~la~~l~~a~ 359 (462)
.+.....++.. +....++.... .|+.... ......+.++..++ .+.++-..|. +.++-.-|..+.+.+.+.+
T Consensus 315 l~~~~~~~P~l~~~~~~v~~~~aGlRPl~~~~~~~~~~~sR~~~i~~~~-~gli~i~Ggk-~Tt~r~mAe~~~d~~~~~~ 392 (561)
T 3da1_A 315 LAAANYMFPSLRLTADDVESSWAGLRPLIHEEGKKASEISRKDEIFFSD-SGLISIAGGK-LTGYRKMAERTVDAVAQGL 392 (561)
T ss_dssp HHHHHHHCTTCCCCTTTEEEEEEEEEEEEEC-----------CCEEECS-SCCEEECCCC-STTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCChhhEEEEeEEeccccCCCCCCccccccceEEEecC-CCeEEEeCCh-hhhHHHHHHHHHHHHHHhc
Confidence 44444444322 12334443322 3332111 11222344455543 5666666665 7777766777777666655
Q ss_pred h
Q 012488 360 E 360 (462)
Q Consensus 360 ~ 360 (462)
.
T Consensus 393 ~ 393 (561)
T 3da1_A 393 N 393 (561)
T ss_dssp T
T ss_pred C
Confidence 3
No 44
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.37 E-value=3.1e-11 Score=120.46 Aligned_cols=61 Identities=8% Similarity=0.065 Sum_probs=49.1
Q ss_pred eeehHHHHHHHHHHHHHCCCEEEcc----eeEEEEecCCCCCCEE-EEEeccCCccCCCCceeEEEecEEEecCCCChH
Q 012488 139 MVRREVLDAYLRERAEKNGASVING----LFMKMDLPRNFEQPYV-LYYTEYDGTKGGVGEKRTLEVDAVIGADGANSR 212 (462)
Q Consensus 139 ~v~r~~l~~~L~~~~~~~gv~i~~~----~v~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S~ 212 (462)
.++...+.+.|.+.+++.|++|+.+ .|+++.. +++.++ |.+.+| .+++||.||.|+|.+|.
T Consensus 157 ~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~---~~~~v~gV~t~~G----------~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 157 WAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIF---ENNDVKGAVTADG----------KIWRAERTFLCAGASAG 222 (438)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEE---ETTEEEEEEETTT----------EEEECSEEEECCGGGGG
T ss_pred EecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEe---cCCeEEEEEECCC----------CEEECCEEEECCCCChh
Confidence 4566788899999999999999977 5888873 234465 777665 68999999999999985
No 45
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.36 E-value=2.5e-11 Score=127.86 Aligned_cols=66 Identities=12% Similarity=0.167 Sum_probs=52.4
Q ss_pred eeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCCChH-hhhh
Q 012488 139 MVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSR-VAKS 216 (462)
Q Consensus 139 ~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S~-vr~~ 216 (462)
.++...+...|.+.+++.|++|+.++ |+++.. +++.+.|.+.+| .+++||.||.|+|.+|. +.+.
T Consensus 413 ~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~---~~~~v~V~t~~G----------~~i~Ad~VVlAtG~~s~~l~~~ 479 (676)
T 3ps9_A 413 WLCPAELTRNVLELAQQQGLQIYYQYQLQNFSR---KDDCWLLNFAGD----------QQATHSVVVLANGHQISRFSQT 479 (676)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEEESCCEEEEEE---ETTEEEEEETTS----------CEEEESEEEECCGGGGGCSTTT
T ss_pred eeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEE---eCCeEEEEECCC----------CEEECCEEEECCCcchhccccc
Confidence 46678899999999999999999987 999983 234477776665 57999999999999986 4444
Q ss_pred h
Q 012488 217 I 217 (462)
Q Consensus 217 l 217 (462)
.
T Consensus 480 ~ 480 (676)
T 3ps9_A 480 S 480 (676)
T ss_dssp T
T ss_pred c
Confidence 3
No 46
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.35 E-value=5.1e-11 Score=125.63 Aligned_cols=67 Identities=15% Similarity=0.141 Sum_probs=52.1
Q ss_pred eeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCcee-EEEecEEEecCCCChH-hhh
Q 012488 139 MVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKR-TLEVDAVIGADGANSR-VAK 215 (462)
Q Consensus 139 ~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~adlvI~AdG~~S~-vr~ 215 (462)
.++...+.+.|.+.+++.|++|+.++ |+++.. +++.+.|.+.+| . +++||.||.|+|.+|. +.+
T Consensus 408 ~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~---~~~~v~V~t~~G----------~~~i~Ad~VVlAtG~~s~~l~~ 474 (689)
T 3pvc_A 408 WLCPSDLTHALMMLAQQNGMTCHYQHELQRLKR---IDSQWQLTFGQS----------QAAKHHATVILATGHRLPEWEQ 474 (689)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEEESCCEEEEEE---CSSSEEEEEC-C----------CCCEEESEEEECCGGGTTCSTT
T ss_pred EECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEE---eCCeEEEEeCCC----------cEEEECCEEEECCCcchhcccc
Confidence 45677899999999999999999887 999983 334577777665 4 7999999999999985 444
Q ss_pred hhc
Q 012488 216 SIN 218 (462)
Q Consensus 216 ~l~ 218 (462)
.++
T Consensus 475 ~~~ 477 (689)
T 3pvc_A 475 THH 477 (689)
T ss_dssp TTT
T ss_pred ccC
Confidence 443
No 47
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.33 E-value=1.1e-09 Score=110.22 Aligned_cols=38 Identities=34% Similarity=0.431 Sum_probs=32.6
Q ss_pred CCCCCccEEEECCchHHHHHHHHHHHCC------CcEEEEcCCC
Q 012488 46 LTNRNLRVAVIGGGPAGGAAAETLAKNG------VETFLIERKL 83 (462)
Q Consensus 46 ~~~~~~dVvIVGgG~aGl~~A~~L~~~g------~~v~v~E~~~ 83 (462)
|+.+++||+|||||++||++|+.|+++| ++|+|+|+++
T Consensus 1 M~~~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~ 44 (470)
T 3i6d_A 1 MSDGKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASP 44 (470)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSS
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCC
Confidence 3445689999999999999999999999 9999999986
No 48
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.32 E-value=4.6e-12 Score=128.67 Aligned_cols=144 Identities=19% Similarity=0.203 Sum_probs=86.3
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCC-CC-------------------c---cccc-Cc-cccccCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC-KP-------------------C---GGAI-PL-CMVGEFD 102 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~-~~-------------------~---g~~i-~~-~~l~~~g 102 (462)
.+++||+||||||+|+++|+.|++.|++|+|+|+.+... +. . |.+. +. .....+.
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~ 184 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK 184 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEec
Confidence 445899999999999999999999999999999986320 00 0 0000 00 0000000
Q ss_pred CC----hhhHhcccceEEEEcCCCceEeccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCC
Q 012488 103 LP----LDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQP 177 (462)
Q Consensus 103 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~ 177 (462)
.. ..+... +...+..... .....+.........+.+.|.+.+++.|+++++++ |+++.. +++..
T Consensus 185 ~~~~~~~~v~~~-------~~~~G~~~~i--~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~--~~~~v 253 (549)
T 3nlc_A 185 DPNFYGRKVITE-------FVEAGAPEEI--LYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHM--EDGQI 253 (549)
T ss_dssp CTTCHHHHHHHH-------HHHTTCCGGG--GTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEE--SSSBE
T ss_pred cccccHHHHHHH-------HHHcCCCceE--eeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEE--eCCEE
Confidence 00 000000 0000000000 00111111123456788889999999999999998 999873 22323
Q ss_pred EEEEEeccCCccCCCCceeEEEecEEEecCCCChH
Q 012488 178 YVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSR 212 (462)
Q Consensus 178 ~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S~ 212 (462)
..|.+.+| .+++||+||.|+|.+|.
T Consensus 254 ~gV~l~~G----------~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 254 TGVTLSNG----------EEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp EEEEETTS----------CEEECSCEEECCCTTCH
T ss_pred EEEEECCC----------CEEECCEEEECCCCChh
Confidence 44777666 68999999999999995
No 49
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.31 E-value=7.5e-12 Score=113.75 Aligned_cols=129 Identities=19% Similarity=0.131 Sum_probs=85.8
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCcc-ccccCCCChhhHhcccceEEEEcCCCceEecc
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLC-MVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~-~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (462)
++||+|||||++|+.+|+.|++.|.+|+|+|+... ..| .+.. .+..+.. ..+... +. +
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~---~~G--~~~~~~~~~~~~-~~~~~~-~~-----d--------- 61 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLD---AVM--MPFLPPKPPFPP-GSLLER-AY-----D--------- 61 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGG---GTT--CCSSCCCSCCCT-TCHHHH-HC-----C---------
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCC---cCC--cccCccccccch-hhHHhh-hc-----c---------
Confidence 58999999999999999999999999999999842 112 1100 0000000 011110 10 0
Q ss_pred CcccCCCeEEeeehHHHHHHHHHHHHHC-CCEEEcceeEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecC
Q 012488 129 QTLKPHEYIGMVRREVLDAYLRERAEKN-GASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGAD 207 (462)
Q Consensus 129 ~~~~~~~~~~~v~r~~l~~~L~~~~~~~-gv~i~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~Ad 207 (462)
...+ ++..+.+.|.+.+++. |++++...|+++.. +++..+.|.+.+| .+++||.||.|+
T Consensus 62 ---~~g~-----~~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~--~~~~v~~v~~~~g----------~~i~a~~VV~A~ 121 (232)
T 2cul_A 62 ---PKDE-----RVWAFHARAKYLLEGLRPLHLFQATATGLLL--EGNRVVGVRTWEG----------PPARGEKVVLAV 121 (232)
T ss_dssp ---TTCC-----CHHHHHHHHHHHHHTCTTEEEEECCEEEEEE--ETTEEEEEEETTS----------CCEECSEEEECC
T ss_pred ---CCCC-----CHHHHHHHHHHHHHcCCCcEEEEeEEEEEEE--eCCEEEEEEECCC----------CEEECCEEEECC
Confidence 0001 5778999999999987 99998655888873 2222224555555 589999999999
Q ss_pred CCChHhhhhhcC
Q 012488 208 GANSRVAKSINA 219 (462)
Q Consensus 208 G~~S~vr~~l~~ 219 (462)
|.+|..+..++.
T Consensus 122 G~~s~~~~~~G~ 133 (232)
T 2cul_A 122 GSFLGARLFLGG 133 (232)
T ss_dssp TTCSSCEEEETT
T ss_pred CCChhhceecCC
Confidence 999987765543
No 50
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.29 E-value=4.6e-10 Score=111.35 Aligned_cols=33 Identities=36% Similarity=0.598 Sum_probs=31.6
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+||+|||||++||++|+.|+++|++|+|+|+++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSA 33 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 489999999999999999999999999999986
No 51
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.28 E-value=6.4e-11 Score=110.99 Aligned_cols=150 Identities=16% Similarity=0.181 Sum_probs=87.9
Q ss_pred CCccEEEECCchHHHHHHHHHHHC-CCcEEEEcCCCCCC---CCcccccCccccccCCCChhhHhcccceEEEEcCCCce
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKN-GVETFLIERKLDNC---KPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVA 124 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~-g~~v~v~E~~~~~~---~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 124 (462)
.++||+|||||++|+++|+.|+++ |++|+|+|+.+... ..++..+..-.+.. ...++.... +..
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~--~~~~~l~~~----------G~~ 105 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRK--PAHLFLDEI----------GVA 105 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEET--TTHHHHHHH----------TCC
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCc--HHHHHHHHc----------CCC
Confidence 467999999999999999999997 99999999987321 11121111100000 001111100 000
Q ss_pred EeccCcccCCCeEEeeehHHHHHHHHHHHHH-CCCEEEcce-eEEEEecCCCCCCE-EEEEecc----CCccCCCCceeE
Q 012488 125 VDIGQTLKPHEYIGMVRREVLDAYLRERAEK-NGASVINGL-FMKMDLPRNFEQPY-VLYYTEY----DGTKGGVGEKRT 197 (462)
Q Consensus 125 ~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~-~gv~i~~~~-v~~~~~~~~~~~~~-~v~~~~~----~~~~~~~~~~~~ 197 (462)
+.. ...+....+...+...|.+.+.+ .|++++.++ |.++.. + ++.+ .|.+.+. .......++..+
T Consensus 106 ~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~--~-~~~v~gv~~~~~~~~~~~~~g~~g~~~~ 177 (284)
T 1rp0_A 106 YDE-----QDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIV--K-GNRVGGVVTNWALVAQNHHTQSCMDPNV 177 (284)
T ss_dssp CEE-----CSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEE--E-TTEEEEEEEEEHHHHTCTTTSSCCCCEE
T ss_pred ccc-----CCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEe--c-CCeEEEEEEeccccccccCccccCceEE
Confidence 000 01122122567788888888876 699999987 988873 2 2222 3443310 000001234478
Q ss_pred EEecEEEecCCCChHhhhhhc
Q 012488 198 LEVDAVIGADGANSRVAKSIN 218 (462)
Q Consensus 198 ~~adlvI~AdG~~S~vr~~l~ 218 (462)
++||.||.|+|.+|.++....
T Consensus 178 i~ad~VV~AtG~~s~~~~~~~ 198 (284)
T 1rp0_A 178 MEAKIVVSSCGHDGPFGATGV 198 (284)
T ss_dssp EEEEEEEECCCSSSTTTTHHH
T ss_pred EECCEEEECCCCchHHHHHHH
Confidence 999999999999998876553
No 52
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.26 E-value=4e-11 Score=122.78 Aligned_cols=149 Identities=17% Similarity=0.173 Sum_probs=90.1
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC-CC-CCCccc---ccCc----cccccCCC-ChhhHhcccceEEEE
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL-DN-CKPCGG---AIPL----CMVGEFDL-PLDIIDRKVTKMKMI 118 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~-~~-~~~~g~---~i~~----~~l~~~g~-~~~~~~~~~~~~~~~ 118 (462)
.++||+|||||+||+.+|+.|++.|.+|+|+|++. .. ...|.. ++.. +.++.++- ...+.......+...
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l 106 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRIL 106 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhh
Confidence 46899999999999999999999999999999984 11 112221 1110 11122221 111111111111111
Q ss_pred cCCCceEeccCcccCCCeEEeeehHHHHHHHHHHHHH-CCCEEEcceeEEEEecCCCCCCEEEEEeccCCccCCCCceeE
Q 012488 119 SPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEK-NGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRT 197 (462)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~-~gv~i~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 197 (462)
.... +. ........+++..+...|.+.+++ .|++++.+.|+++.. +++..+.|.+.+| .+
T Consensus 107 ~~~k-----gp--av~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~--e~g~V~GV~t~dG----------~~ 167 (651)
T 3ces_A 107 NASK-----GP--AVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIV--ENDRVVGAVTQMG----------LK 167 (651)
T ss_dssp STTS-----CG--GGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEE--SSSBEEEEEETTS----------EE
T ss_pred hccc-----Cc--ccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEe--cCCEEEEEEECCC----------CE
Confidence 1100 00 001112357888899999999988 699997766888873 2222234666555 68
Q ss_pred EEecEEEecCCCChHhhhh
Q 012488 198 LEVDAVIGADGANSRVAKS 216 (462)
Q Consensus 198 ~~adlvI~AdG~~S~vr~~ 216 (462)
++||.||+|+|.+|..+..
T Consensus 168 I~Ad~VVLATGt~s~~~~i 186 (651)
T 3ces_A 168 FRAKAVVLTVGTFLDGKIH 186 (651)
T ss_dssp EEEEEEEECCSTTTCCEEE
T ss_pred EECCEEEEcCCCCccCccc
Confidence 9999999999998865443
No 53
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.24 E-value=1.2e-11 Score=122.26 Aligned_cols=158 Identities=14% Similarity=0.122 Sum_probs=88.4
Q ss_pred CCCCCccEEEECCchHHHHHHHHHHHC--CCcEEEEcCCCCCCCC---ccc-cc-CccccccCCCChhh-------Hhcc
Q 012488 46 LTNRNLRVAVIGGGPAGGAAAETLAKN--GVETFLIERKLDNCKP---CGG-AI-PLCMVGEFDLPLDI-------IDRK 111 (462)
Q Consensus 46 ~~~~~~dVvIVGgG~aGl~~A~~L~~~--g~~v~v~E~~~~~~~~---~g~-~i-~~~~l~~~g~~~~~-------~~~~ 111 (462)
|...++||+|||||++|+++|+.|+++ |++|+|+|+....... +++ .+ ....... . ...+ ....
T Consensus 32 m~~~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~-~-~~~l~~~~~~~~~~~ 109 (405)
T 3c4n_A 32 FTEEAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPA-G-QEAQAEWTREQLLGA 109 (405)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCT-T-CHHHHHHHHHHHHTG
T ss_pred CCcCcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCc-h-HHHHHHHHHHHHHHH
Confidence 445568999999999999999999999 9999999998622111 222 23 1111100 0 0000 0000
Q ss_pred cc---eEEEEcCCCc-----------eEecc---Cc---cc-----CC-------CeEEeeehHHHHHHHHHHHHHCCCE
Q 012488 112 VT---KMKMISPSNV-----------AVDIG---QT---LK-----PH-------EYIGMVRREVLDAYLRERAEKNGAS 159 (462)
Q Consensus 112 ~~---~~~~~~~~~~-----------~~~~~---~~---~~-----~~-------~~~~~v~r~~l~~~L~~~~~~~gv~ 159 (462)
.. ...+. ..+. .++.. .. .. .. .....++...+.+.|.+.+++.|++
T Consensus 110 ~~~~~~~~~~-~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~ 188 (405)
T 3c4n_A 110 LGSGKTLEVE-DRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAG 188 (405)
T ss_dssp GGSSCCCCEE-ECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCE
T ss_pred hCCCCCCcEE-eeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHCCCE
Confidence 00 00000 0000 00000 00 00 00 0012567788999999999999999
Q ss_pred EEcce-eE---------EEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCCCh-Hhhh-hhcCC
Q 012488 160 VINGL-FM---------KMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANS-RVAK-SINAG 220 (462)
Q Consensus 160 i~~~~-v~---------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S-~vr~-~l~~~ 220 (462)
+++++ |+ ++.. +++.+.|.+.+ .+++||.||.|+|.+| .+++ .++..
T Consensus 189 i~~~~~v~~~~g~~~~~~i~~---~~~~v~v~~~~-----------g~i~a~~VV~A~G~~s~~l~~~~~g~~ 247 (405)
T 3c4n_A 189 LLLNTRAELVPGGVRLHRLTV---TNTHQIVVHET-----------RQIRAGVIIVAAGAAGPALVEQGLGLH 247 (405)
T ss_dssp EECSCEEEEETTEEEEECBCC----------CBCC-----------EEEEEEEEEECCGGGHHHHHHHHHCCC
T ss_pred EEcCCEEEeccccccccceEe---eCCeEEEEECC-----------cEEECCEEEECCCccHHHHHHHhcCCC
Confidence 99887 87 6652 23334443322 3799999999999999 6777 77654
No 54
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.24 E-value=7.5e-11 Score=111.89 Aligned_cols=152 Identities=13% Similarity=0.161 Sum_probs=85.3
Q ss_pred CCccEEEECCchHHHHHHHHHHHC--CCcEEEEcCCCCCCCCc--ccccCccccccCCCChhhHhc-ccceEEEEcCCCc
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKN--GVETFLIERKLDNCKPC--GGAIPLCMVGEFDLPLDIIDR-KVTKMKMISPSNV 123 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~--g~~v~v~E~~~~~~~~~--g~~i~~~~l~~~g~~~~~~~~-~~~~~~~~~~~~~ 123 (462)
.++||+||||||+|+++|+.|+++ |++|+|+|+.+...-.+ ++.+....+..-.. ..++.. .+.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~-~~~L~~~Gv~---------- 146 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPA-DVFLDEVGVP---------- 146 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTT-HHHHHHHTCC----------
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHH-HHHHHHcCCc----------
Confidence 358999999999999999999997 99999999986321000 00111111100000 111110 000
Q ss_pred eEeccCcccCCCeEEeeehHHHHHHHHHHHHH-CCCEEEcce-eEEEEecCC--------------CCCCEE---EEEec
Q 012488 124 AVDIGQTLKPHEYIGMVRREVLDAYLRERAEK-NGASVINGL-FMKMDLPRN--------------FEQPYV---LYYTE 184 (462)
Q Consensus 124 ~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~-~gv~i~~~~-v~~~~~~~~--------------~~~~~~---v~~~~ 184 (462)
+. ....+....+...+.+.|.+.+.+ .|+++++++ +.++....+ +.+... |.+..
T Consensus 147 -~~-----~~G~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~ 220 (344)
T 3jsk_A 147 -YE-----DEGDYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNW 220 (344)
T ss_dssp -CE-----ECSSEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEE
T ss_pred -cc-----ccCCeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeee
Confidence 00 001222222356777889988888 599999998 888874221 001111 22211
Q ss_pred ----cCCccCCCCceeEEEecEEEecCCCChHhhhhh
Q 012488 185 ----YDGTKGGVGEKRTLEVDAVIGADGANSRVAKSI 217 (462)
Q Consensus 185 ----~~~~~~~~~~~~~~~adlvI~AdG~~S~vr~~l 217 (462)
..+......+..+++|++||+|||..|.+++.+
T Consensus 221 ~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 221 TLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp HHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCHH
T ss_pred eeeeccCCcccccCceEEEcCEEEECCCCCchhhHHH
Confidence 000000112457899999999999999866544
No 55
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.23 E-value=8.8e-11 Score=114.44 Aligned_cols=60 Identities=10% Similarity=0.078 Sum_probs=47.8
Q ss_pred eeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCCChH
Q 012488 139 MVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSR 212 (462)
Q Consensus 139 ~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S~ 212 (462)
.++...+.+.|.+.+++.|++++.++ |+++.. +++.+.|.+.++ +++||.||.|+|.+|.
T Consensus 145 ~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~---~~~~~~v~~~~g-----------~~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 145 FLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRH---DDDGVTIETADG-----------EYQAKKAIVCAGTWVK 205 (372)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEE---CSSSEEEEESSC-----------EEEEEEEEECCGGGGG
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEE---cCCEEEEEECCC-----------eEEcCEEEEcCCccHH
Confidence 46677888999999999999999887 999873 233466665443 4999999999999874
No 56
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.23 E-value=3.9e-11 Score=116.47 Aligned_cols=122 Identities=20% Similarity=0.183 Sum_probs=85.2
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.+||+||||||+|+++|+.|++.|++|+|||+.+.. |+... .+ .....++. .
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~----gg~~~-----~~----------~~~~~~~~-------~-- 65 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQL----GGQLA-----AL----------YPEKHIYD-------V-- 65 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS----CHHHH-----HT----------CTTSEECC-------S--
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC----CCccc-----cc----------CCCccccc-------C--
Confidence 579999999999999999999999999999997632 21110 00 00000000 0
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
.... .+.+..+.+.|.+.+++.|++++.+. |..+.. ..++.+.|.+.++ .++++|.||.|+|
T Consensus 66 --~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~--~~~~~~~v~~~~g----------~~~~~~~li~AtG 128 (360)
T 3ab1_A 66 --AGFP---EVPAIDLVESLWAQAERYNPDVVLNETVTKYTK--LDDGTFETRTNTG----------NVYRSRAVLIAAG 128 (360)
T ss_dssp --TTCS---SEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEE--CTTSCEEEEETTS----------CEEEEEEEEECCT
T ss_pred --CCCC---CCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEE--CCCceEEEEECCC----------cEEEeeEEEEccC
Confidence 0001 14567788889999988899999876 888874 2333577777665 6899999999999
Q ss_pred CChHhhhh
Q 012488 209 ANSRVAKS 216 (462)
Q Consensus 209 ~~S~vr~~ 216 (462)
.+|...+.
T Consensus 129 ~~~~~~~~ 136 (360)
T 3ab1_A 129 LGAFEPRK 136 (360)
T ss_dssp TCSCCBCC
T ss_pred CCcCCCCC
Confidence 98754443
No 57
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.23 E-value=8.7e-10 Score=106.17 Aligned_cols=137 Identities=15% Similarity=0.250 Sum_probs=77.0
Q ss_pred ccEEEECCchHHHHHHHHHHH---CCCcEEEEcCCCCCCCCcccccCccc-------cccCCC------C------hhhH
Q 012488 51 LRVAVIGGGPAGGAAAETLAK---NGVETFLIERKLDNCKPCGGAIPLCM-------VGEFDL------P------LDII 108 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~---~g~~v~v~E~~~~~~~~~g~~i~~~~-------l~~~g~------~------~~~~ 108 (462)
+||+|||||++|+++|+.|++ .|++|+||||++.. |+.+.... .-..+. + ..+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~----gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~ 77 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDS----GGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFY 77 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSS----CGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCC----ccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHH
Confidence 499999999999999999999 99999999998632 11111000 000000 0 0000
Q ss_pred hcc--cceEEEEcCCCceEeccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEecc
Q 012488 109 DRK--VTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEY 185 (462)
Q Consensus 109 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~ 185 (462)
... ......+... .. +...... ......+..+..++...+++.|++|+.++ |.++.. +++.+.|++.+|
T Consensus 78 ~~~~~~g~~~~~~~~---~~-~~~~~~~-~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~---~~~~~~v~~~~g 149 (342)
T 3qj4_A 78 DELLAYGVLRPLSSP---IE-GMVMKEG-DCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINL---RDDKWEVSKQTG 149 (342)
T ss_dssp HHHHHTTSCEECCSC---EE-TCCC--C-CEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEE---CSSSEEEEESSS
T ss_pred HHHHhCCCeecCchh---hc-ceeccCC-ccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEE---cCCEEEEEECCC
Confidence 000 0000011000 00 0000011 11123334455555555555589999998 999983 345688888776
Q ss_pred CCccCCCCceeEEEecEEEecCCC
Q 012488 186 DGTKGGVGEKRTLEVDAVIGADGA 209 (462)
Q Consensus 186 ~~~~~~~~~~~~~~adlvI~AdG~ 209 (462)
.++++|.||.|...
T Consensus 150 ----------~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 150 ----------SPEQFDLIVLTMPV 163 (342)
T ss_dssp ----------CCEEESEEEECSCH
T ss_pred ----------CEEEcCEEEECCCH
Confidence 56899999999974
No 58
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.23 E-value=3.9e-11 Score=115.15 Aligned_cols=125 Identities=26% Similarity=0.382 Sum_probs=85.2
Q ss_pred CCCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEe
Q 012488 47 TNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVD 126 (462)
Q Consensus 47 ~~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 126 (462)
..+++||+||||||+|+++|+.|+++|++|+|||+.+......|+.+.... .+. .
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~------------------~~~-------~ 73 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTT------------------EIE-------N 73 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSS------------------EEC-------C
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccch------------------hhc-------c
Confidence 456789999999999999999999999999999997622122232211000 000 0
Q ss_pred ccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcceeEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEec
Q 012488 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGA 206 (462)
Q Consensus 127 ~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~A 206 (462)
+ ..... .+.+..+...|.+.+++.|++++.++|.++.. ++..+.+.+... ++..++.+|.||.|
T Consensus 74 ~----~~~~~--~~~~~~~~~~~~~~~~~~gv~i~~~~v~~i~~---~~~~~~v~~~~~-------~~~~~~~~d~vvlA 137 (338)
T 3itj_A 74 F----PGFPD--GLTGSELMDRMREQSTKFGTEIITETVSKVDL---SSKPFKLWTEFN-------EDAEPVTTDAIILA 137 (338)
T ss_dssp S----TTCTT--CEEHHHHHHHHHHHHHHTTCEEECSCEEEEEC---SSSSEEEEETTC-------SSSCCEEEEEEEEC
T ss_pred c----CCCcc--cCCHHHHHHHHHHHHHHcCCEEEEeEEEEEEE---cCCEEEEEEEec-------CCCcEEEeCEEEEC
Confidence 0 00011 25677889999999999999999988888872 344577766321 12268999999999
Q ss_pred CCCChH
Q 012488 207 DGANSR 212 (462)
Q Consensus 207 dG~~S~ 212 (462)
+|..+.
T Consensus 138 tG~~~~ 143 (338)
T 3itj_A 138 TGASAK 143 (338)
T ss_dssp CCEEEC
T ss_pred cCCCcC
Confidence 998654
No 59
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.23 E-value=1.5e-11 Score=126.78 Aligned_cols=161 Identities=14% Similarity=0.117 Sum_probs=91.6
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCC---CCcccccCc---cccccCCCChhh--------------
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC---KPCGGAIPL---CMVGEFDLPLDI-------------- 107 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~---~~~g~~i~~---~~l~~~g~~~~~-------------- 107 (462)
..++||+|||||++|+++|+.|+++|++|+||||.+... ...++++.. ...+.+++.+..
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~ 198 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQ 198 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 356899999999999999999999999999999987321 122333311 111222221110
Q ss_pred -----Hhc----ccceEEEEcCCCceE---e-ccCcccCCCeE---EeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEe
Q 012488 108 -----IDR----KVTKMKMISPSNVAV---D-IGQTLKPHEYI---GMVRREVLDAYLRERAEKNGASVINGL-FMKMDL 170 (462)
Q Consensus 108 -----~~~----~~~~~~~~~~~~~~~---~-~~~~~~~~~~~---~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~ 170 (462)
+.. ....+.++...+..+ . .+....+..+. ..+....+.+.|.+.+++.|++|+.++ |+++..
T Consensus 199 ~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~ 278 (566)
T 1qo8_A 199 NDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVV 278 (566)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEE
T ss_pred CCHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEE
Confidence 000 000000000001000 0 00000000000 013466788999999999999999998 998873
Q ss_pred cCCCCCCE-EEEEeccCCccCCCCceeEEEecEEEecCCCChHhhhh
Q 012488 171 PRNFEQPY-VLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKS 216 (462)
Q Consensus 171 ~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S~vr~~ 216 (462)
++++.+ .|.+.+. .|+..+++||.||.|+|.+|..++.
T Consensus 279 --~~~g~v~Gv~~~~~------~g~~~~i~A~~VVlAtGg~s~~~~~ 317 (566)
T 1qo8_A 279 --NDDHSVVGAVVHGK------HTGYYMIGAKSVVLATGGYGMNKEM 317 (566)
T ss_dssp --CTTSBEEEEEEEET------TTEEEEEEEEEEEECCCCCTTCHHH
T ss_pred --CCCCcEEEEEEEeC------CCcEEEEEcCEEEEecCCcccCHHH
Confidence 231333 3555431 1334579999999999999976543
No 60
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.22 E-value=7.7e-11 Score=115.90 Aligned_cols=146 Identities=17% Similarity=0.213 Sum_probs=83.3
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCC---ccccc---C------cccccc-CCCChhhHhcc-c-ce
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKP---CGGAI---P------LCMVGE-FDLPLDIIDRK-V-TK 114 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~---~g~~i---~------~~~l~~-~g~~~~~~~~~-~-~~ 114 (462)
++||+|||||++|+++|+.|+++|.+|+|+|+++..... .|++. . ...+.. -......+... . ..
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDF 83 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHH
Confidence 589999999999999999999999999999998732110 11110 0 000100 00000000000 0 00
Q ss_pred EEEEcCCCceEeccCcccCCCeEEee--ehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCC-CCCCEEEEEeccCCccC
Q 012488 115 MKMISPSNVAVDIGQTLKPHEYIGMV--RREVLDAYLRERAEKNGASVINGL-FMKMDLPRN-FEQPYVLYYTEYDGTKG 190 (462)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~v--~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~-~~~~~~v~~~~~~~~~~ 190 (462)
+.+....+..+... ..... +. +...+.+.|.+.+++.|++++.++ |+++....+ .++.+.|.+.+
T Consensus 84 ~~~~~~~Gi~~~~~----~~g~~-~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~------ 152 (401)
T 2gqf_A 84 ISLVAEQGITYHEK----ELGQL-FCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNS------ 152 (401)
T ss_dssp HHHHHHTTCCEEEC----STTEE-EETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETT------
T ss_pred HHHHHhCCCceEEC----cCCEE-ccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECC------
Confidence 00000001101000 00110 11 567788899999999999999988 988873100 02346665533
Q ss_pred CCCceeEEEecEEEecCCCCh
Q 012488 191 GVGEKRTLEVDAVIGADGANS 211 (462)
Q Consensus 191 ~~~~~~~~~adlvI~AdG~~S 211 (462)
.+++||.||.|+|.+|
T Consensus 153 -----g~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 153 -----TQWQCKNLIVATGGLS 168 (401)
T ss_dssp -----EEEEESEEEECCCCSS
T ss_pred -----CEEECCEEEECCCCcc
Confidence 3799999999999999
No 61
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.22 E-value=1.6e-09 Score=108.36 Aligned_cols=71 Identities=18% Similarity=0.187 Sum_probs=50.9
Q ss_pred eeehHHHHHHHHHHHHHCCCEEEcce-eEEEEec-----------CC-CCCCE-EEEEeccCCccCCCCceeEE--EecE
Q 012488 139 MVRREVLDAYLRERAEKNGASVINGL-FMKMDLP-----------RN-FEQPY-VLYYTEYDGTKGGVGEKRTL--EVDA 202 (462)
Q Consensus 139 ~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~-----------~~-~~~~~-~v~~~~~~~~~~~~~~~~~~--~adl 202 (462)
.++...+.+.|.+.+++.|++++.++ |+++... .. +++.+ .|.+.+| ++ +||.
T Consensus 177 ~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-----------~i~~~Ad~ 245 (448)
T 3axb_A 177 FLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-----------TRVEVGEK 245 (448)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-----------CEEEEEEE
T ss_pred EEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-----------EEeecCCE
Confidence 45667899999999999999999877 9988730 00 22222 3444332 57 9999
Q ss_pred EEecCCCChH-hhhhhcCC
Q 012488 203 VIGADGANSR-VAKSINAG 220 (462)
Q Consensus 203 vI~AdG~~S~-vr~~l~~~ 220 (462)
||.|+|.+|. +.+.++..
T Consensus 246 VV~AtG~~s~~l~~~~g~~ 264 (448)
T 3axb_A 246 LVVAAGVWSNRLLNPLGID 264 (448)
T ss_dssp EEECCGGGHHHHHGGGTCC
T ss_pred EEECCCcCHHHHHHHcCCC
Confidence 9999999986 77766543
No 62
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.21 E-value=1.3e-09 Score=112.22 Aligned_cols=73 Identities=14% Similarity=0.038 Sum_probs=51.0
Q ss_pred eehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCCChH-hhhhh
Q 012488 140 VRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSR-VAKSI 217 (462)
Q Consensus 140 v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S~-vr~~l 217 (462)
++...+...|.+.+++.|++++.++ |+++.. +++..+.|.+.+. .+++..+++||.||.|+|.+|. +++..
T Consensus 185 v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~--~~~~v~gV~~~d~-----~tg~~~~i~A~~VV~AaG~ws~~l~~~~ 257 (571)
T 2rgh_A 185 NNDARLVIDNIKKAAEDGAYLVSKMKAVGFLY--EGDQIVGVKARDL-----LTDEVIEIKAKLVINTSGPWVDKVRNLN 257 (571)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEESSEEEEEEEE--ETTEEEEEEEEET-----TTCCEEEEEBSCEEECCGGGHHHHHTTC
T ss_pred EchHHHHHHHHHHHHHcCCeEEeccEEEEEEE--eCCEEEEEEEEEc-----CCCCEEEEEcCEEEECCChhHHHHHHhh
Confidence 4556677778888999999999987 998873 2222234655542 1234458999999999999984 66655
Q ss_pred cC
Q 012488 218 NA 219 (462)
Q Consensus 218 ~~ 219 (462)
+.
T Consensus 258 g~ 259 (571)
T 2rgh_A 258 FT 259 (571)
T ss_dssp CS
T ss_pred cc
Confidence 43
No 63
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.20 E-value=4e-11 Score=115.12 Aligned_cols=122 Identities=16% Similarity=0.171 Sum_probs=83.2
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEecc
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (462)
+++||+||||||+|+++|+.|++.|++|+|||+++.. |+... .. .+. ..++. .
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~----gg~~~----~~--~~~---------~~~~~-------~- 56 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEP----GGQLT----AL--YPE---------KYIYD-------V- 56 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS----CHHHH----HT--CTT---------SEECC-------S-
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC----CCeee----cc--CCC---------ceeec-------c-
Confidence 4689999999999999999999999999999997632 21110 00 000 00000 0
Q ss_pred CcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecC
Q 012488 129 QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGAD 207 (462)
Q Consensus 129 ~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~Ad 207 (462)
...+ .+.+..+.+.|.+.+++.+++++.+. |..+.. . ++.+.|.+.++ .++++|.||.|+
T Consensus 57 ---~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~--~-~~~~~v~~~~g----------~~~~~~~lv~At 117 (335)
T 2zbw_A 57 ---AGFP---KVYAKDLVKGLVEQVAPFNPVYSLGERAETLER--E-GDLFKVTTSQG----------NAYTAKAVIIAA 117 (335)
T ss_dssp ---TTCS---SEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEE--E-TTEEEEEETTS----------CEEEEEEEEECC
T ss_pred ---CCCC---CCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEE--C-CCEEEEEECCC----------CEEEeCEEEECC
Confidence 0011 24566788888888888899998776 888873 2 22466766554 689999999999
Q ss_pred CCChHhhhh
Q 012488 208 GANSRVAKS 216 (462)
Q Consensus 208 G~~S~vr~~ 216 (462)
|.+|...+.
T Consensus 118 G~~~~~p~~ 126 (335)
T 2zbw_A 118 GVGAFEPRR 126 (335)
T ss_dssp TTSEEEECC
T ss_pred CCCCCCCCC
Confidence 997754443
No 64
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.20 E-value=3.3e-11 Score=116.53 Aligned_cols=129 Identities=21% Similarity=0.254 Sum_probs=82.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
++||+|||||++|+++|..|+++|++|+|+|+.+.. |+... .....+.+......... .+. ..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~----gg~~~-~~~~~~~~~~~~~~~~~--------~~~--~~-- 65 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASP----GGAWQ-HAWHSLHLFSPAGWSSI--------PGW--PM-- 65 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSS----SGGGG-GSCTTCBCSSCGGGSCC--------SSS--CC--
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC----CCccc-CCCCCcEecCchhhhhC--------CCC--CC--
Confidence 479999999999999999999999999999998632 21111 00000000000000000 000 00
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEE-EEEeccCCccCCCCceeEEEecEEEecC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYV-LYYTEYDGTKGGVGEKRTLEVDAVIGAD 207 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~adlvI~Ad 207 (462)
...... ...+..+.+.|.+.+++.|++++.++ |+++.. .++.+. |++.+ .++++|.||.|+
T Consensus 66 ~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~---~~~~~~~v~~~~-----------g~~~~d~vV~At 128 (357)
T 4a9w_A 66 PASQGP---YPARAEVLAYLAQYEQKYALPVLRPIRVQRVSH---FGERLRVVARDG-----------RQWLARAVISAT 128 (357)
T ss_dssp CCCSSS---SCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEE---ETTEEEEEETTS-----------CEEEEEEEEECC
T ss_pred CCCccC---CCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEE---CCCcEEEEEeCC-----------CEEEeCEEEECC
Confidence 001111 35678899999999999999999886 988873 233455 54332 379999999999
Q ss_pred CCChH
Q 012488 208 GANSR 212 (462)
Q Consensus 208 G~~S~ 212 (462)
|.+|.
T Consensus 129 G~~~~ 133 (357)
T 4a9w_A 129 GTWGE 133 (357)
T ss_dssp CSGGG
T ss_pred CCCCC
Confidence 98774
No 65
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.19 E-value=1e-10 Score=119.81 Aligned_cols=147 Identities=21% Similarity=0.265 Sum_probs=88.2
Q ss_pred CCCCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCC-C-CCCccccc---C-ccccccC---C-CChhhHhcccceE
Q 012488 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD-N-CKPCGGAI---P-LCMVGEF---D-LPLDIIDRKVTKM 115 (462)
Q Consensus 46 ~~~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~-~-~~~~g~~i---~-~~~l~~~---g-~~~~~~~~~~~~~ 115 (462)
....++||+|||||+||+.+|+.|++.|.+|+|+|++.. . ...|...+ . ...++++ + +...........+
T Consensus 17 ~~~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f 96 (641)
T 3cp8_A 17 RGSHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQF 96 (641)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEE
T ss_pred cccCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCch
Confidence 445579999999999999999999999999999999841 1 11222111 0 1112221 1 1111111111111
Q ss_pred EEEcCCCceEeccCcccCCCeEEeeehHHHHHHHHHHHHHC-CCEEEcceeEEEEecCCCCCCEE-EEEeccCCccCCCC
Q 012488 116 KMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKN-GASVINGLFMKMDLPRNFEQPYV-LYYTEYDGTKGGVG 193 (462)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~-gv~i~~~~v~~~~~~~~~~~~~~-v~~~~~~~~~~~~~ 193 (462)
....... +. ........+++..+...|.+.+++. |++++.+.|.++.. +++.+. |.+.+|
T Consensus 97 ~~l~~~k-----gp--av~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~---d~g~V~GV~t~~G-------- 158 (641)
T 3cp8_A 97 RMLNRSK-----GP--AMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSA---NSGKFSSVTVRSG-------- 158 (641)
T ss_dssp EEECSSS-----CT--TTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEE---ETTEEEEEEETTS--------
T ss_pred hhccccc-----Cc--cccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEe---cCCEEEEEEECCC--------
Confidence 1111100 00 0011123578889999999999885 89998777888763 233344 666555
Q ss_pred ceeEEEecEEEecCCCChH
Q 012488 194 EKRTLEVDAVIGADGANSR 212 (462)
Q Consensus 194 ~~~~~~adlvI~AdG~~S~ 212 (462)
.+++||.||+|+|.++.
T Consensus 159 --~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 159 --RAIQAKAAILACGTFLN 175 (641)
T ss_dssp --CEEEEEEEEECCTTCBT
T ss_pred --cEEEeCEEEECcCCCCC
Confidence 68999999999998865
No 66
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.18 E-value=9.7e-11 Score=119.53 Aligned_cols=146 Identities=17% Similarity=0.188 Sum_probs=88.8
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC-CC-CCCccc---ccCc-cc---cccCC-CChhhHhcccceEEEE
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL-DN-CKPCGG---AIPL-CM---VGEFD-LPLDIIDRKVTKMKMI 118 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~-~~-~~~~g~---~i~~-~~---l~~~g-~~~~~~~~~~~~~~~~ 118 (462)
.++||+|||||+||+.+|+.|++.|.+|+|+|++. .. ...|.. ++.. .. ++.++ ....+.......+...
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l 105 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKML 105 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeec
Confidence 46899999999999999999999999999999984 11 111211 1110 11 11222 1111111111111111
Q ss_pred cCCCceEeccCcccCCCeEEeeehHHHHHHHHHHHHH-CCCEEEcceeEEEEecCCCCCCE-EEEEeccCCccCCCCcee
Q 012488 119 SPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEK-NGASVINGLFMKMDLPRNFEQPY-VLYYTEYDGTKGGVGEKR 196 (462)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~-~gv~i~~~~v~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~ 196 (462)
.... +. ........+++..+.+.|.+.+++ .|++++.+.|+++.. +++.+ .|.+.+| .
T Consensus 106 ~~~k-----Gp--av~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~---e~g~V~GV~t~dG----------~ 165 (637)
T 2zxi_A 106 NTRK-----GK--AVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIV---KNNQVVGVRTNLG----------V 165 (637)
T ss_dssp STTS-----CG--GGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEE---SSSBEEEEEETTS----------C
T ss_pred cccc-----Cc--cccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEe---cCCEEEEEEECCC----------c
Confidence 1100 00 001112356888899999999988 589997666888873 23333 4666555 6
Q ss_pred EEEecEEEecCCCChHhh
Q 012488 197 TLEVDAVIGADGANSRVA 214 (462)
Q Consensus 197 ~~~adlvI~AdG~~S~vr 214 (462)
++.|+.||.|+|.++..+
T Consensus 166 ~i~AdaVVLATG~~s~~~ 183 (637)
T 2zxi_A 166 EYKTKAVVVTTGTFLNGV 183 (637)
T ss_dssp EEECSEEEECCTTCBTCE
T ss_pred EEEeCEEEEccCCCccCc
Confidence 899999999999987644
No 67
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.18 E-value=3.9e-11 Score=123.79 Aligned_cols=156 Identities=15% Similarity=0.112 Sum_probs=89.4
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCC---CCcccccC---ccccccCCCChh---hHhcc--------
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC---KPCGGAIP---LCMVGEFDLPLD---IIDRK-------- 111 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~---~~~g~~i~---~~~l~~~g~~~~---~~~~~-------- 111 (462)
.++||+|||||++|+++|+.|+++|++|+|+||.+... ...++++. ....+++++.+. +....
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIN 204 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 46899999999999999999999999999999987321 12233331 111222332111 00000
Q ss_pred ------------cceEEEEcCCCceE----eccCcccCCCeEEe-----eehHHHHHHHHHHHHHCCCEEEcce-eEEEE
Q 012488 112 ------------VTKMKMISPSNVAV----DIGQTLKPHEYIGM-----VRREVLDAYLRERAEKNGASVINGL-FMKMD 169 (462)
Q Consensus 112 ------------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-----v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~ 169 (462)
...+.++...+..+ ..+.. ....... .....+.+.|.+.+++.|++|+.++ |+++.
T Consensus 205 ~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~--~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~ 282 (571)
T 1y0p_A 205 DPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGA--SVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVL 282 (571)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTC--SSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEE
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCCCccCcccCCc--CCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeE
Confidence 00000000001000 00000 0000001 2346788999999999999999998 99887
Q ss_pred ecCCCCCCEE-EEEeccCCccCCCCceeEEEecEEEecCCCChHhh
Q 012488 170 LPRNFEQPYV-LYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVA 214 (462)
Q Consensus 170 ~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S~vr 214 (462)
. ++++.+. |.+.+. .|+..+++||.||.|+|.+|..+
T Consensus 283 ~--~~~g~v~Gv~~~~~------~g~~~~i~a~~VVlAtGg~~~n~ 320 (571)
T 1y0p_A 283 K--DDKGTVKGILVKGM------YKGYYWVKADAVILATGGFAKNN 320 (571)
T ss_dssp E--CTTSCEEEEEEEET------TTEEEEEECSEEEECCCCCTTCH
T ss_pred E--cCCCeEEEEEEEeC------CCcEEEEECCeEEEeCCCcccCH
Confidence 3 3323332 555431 13345899999999999988643
No 68
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.18 E-value=8e-11 Score=110.77 Aligned_cols=113 Identities=16% Similarity=0.129 Sum_probs=80.8
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEecc
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (462)
|++||+||||||+|+++|..|+++|++|+|+|+.+.. + .++.. . . .+
T Consensus 1 m~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~----~-~~~~~---~--------------------~----~~- 47 (297)
T 3fbs_A 1 MKFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERR----N-RFASH---S--------------------H----GF- 47 (297)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCG----G-GGCSC---C--------------------C----SS-
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcc----c-ccchh---h--------------------c----CC-
Confidence 3589999999999999999999999999999987521 0 00000 0 0 00
Q ss_pred CcccCCCeEEeeehHHHHHHHHHHHHHC-CCEEEcceeEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecC
Q 012488 129 QTLKPHEYIGMVRREVLDAYLRERAEKN-GASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGAD 207 (462)
Q Consensus 129 ~~~~~~~~~~~v~r~~l~~~L~~~~~~~-gv~i~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~Ad 207 (462)
.... ......+...+.+.+++. +++++.++|+++.. +++.+.|.+.++ .++.+|.||.|+
T Consensus 48 ---~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~---~~~~~~v~~~~g----------~~~~~d~vviAt 108 (297)
T 3fbs_A 48 ---LGQD---GKAPGEIIAEARRQIERYPTIHWVEGRVTDAKG---SFGEFIVEIDGG----------RRETAGRLILAM 108 (297)
T ss_dssp ---TTCT---TCCHHHHHHHHHHHHTTCTTEEEEESCEEEEEE---ETTEEEEEETTS----------CEEEEEEEEECC
T ss_pred ---cCCC---CCCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEE---cCCeEEEEECCC----------CEEEcCEEEECC
Confidence 0000 134566778888888887 68888778888873 233477877776 689999999999
Q ss_pred CCChHh
Q 012488 208 GANSRV 213 (462)
Q Consensus 208 G~~S~v 213 (462)
|..+..
T Consensus 109 G~~~~~ 114 (297)
T 3fbs_A 109 GVTDEL 114 (297)
T ss_dssp CCEEEC
T ss_pred CCCCCC
Confidence 987654
No 69
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.17 E-value=6.3e-11 Score=113.64 Aligned_cols=120 Identities=25% Similarity=0.369 Sum_probs=82.2
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEecc
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (462)
+++||+||||||+|+++|+.|++.|++|+|+|+........|+.+... .. .. .+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~----------------~~--~~-------~~- 60 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTT----------------TD--VE-------NF- 60 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGC----------------SE--EC-------CS-
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeec----------------cc--cc-------cC-
Confidence 357999999999999999999999999999998321111112111100 00 00 00
Q ss_pred CcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcceeEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 129 QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 129 ~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
..... .+.+..+.+.|.+.+++.|++++.++|.++.. .++.+.|.+ ++ .++++|.||.|+|
T Consensus 61 ---~~~~~--~~~~~~~~~~l~~~~~~~gv~~~~~~v~~i~~---~~~~~~v~~-~~----------~~~~~~~vv~A~G 121 (333)
T 1vdc_A 61 ---PGFPE--GILGVELTDKFRKQSERFGTTIFTETVTKVDF---SSKPFKLFT-DS----------KAILADAVILAIG 121 (333)
T ss_dssp ---TTCTT--CEEHHHHHHHHHHHHHHTTCEEECCCCCEEEC---SSSSEEEEC-SS----------EEEEEEEEEECCC
T ss_pred ---CCCcc--CCCHHHHHHHHHHHHHHCCCEEEEeEEEEEEE---cCCEEEEEE-CC----------cEEEcCEEEECCC
Confidence 00011 24567788889999999999999888877772 334567766 54 6899999999999
Q ss_pred CChHh
Q 012488 209 ANSRV 213 (462)
Q Consensus 209 ~~S~v 213 (462)
.++..
T Consensus 122 ~~~~~ 126 (333)
T 1vdc_A 122 AVAKR 126 (333)
T ss_dssp EEECC
T ss_pred CCcCC
Confidence 87653
No 70
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.17 E-value=1.2e-08 Score=101.12 Aligned_cols=33 Identities=36% Similarity=0.488 Sum_probs=31.8
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+||+|||||++||++|+.|+++|++|+|+|+++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLP 33 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCC
Confidence 489999999999999999999999999999986
No 71
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.17 E-value=1.7e-10 Score=109.66 Aligned_cols=118 Identities=24% Similarity=0.349 Sum_probs=79.3
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.|||+||||||||+++|+.|+++|++|+|||+........+++++...+ +.+ +.
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~------------------i~~-------~~- 57 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTI------------------IEN-------FP- 57 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSE------------------ECC-------ST-
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHH------------------hhh-------cc-
Confidence 4899999999999999999999999999999876211111222221100 000 00
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcceeEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGA 209 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~ 209 (462)
.... .+....+...+.+.+++.++++....+..... ......+...++ .++.+|.||.|+|.
T Consensus 58 --g~~~---~i~~~~l~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~~~~~----------~~~~~~~liiATG~ 119 (314)
T 4a5l_A 58 --GFPN---GIDGNELMMNMRTQSEKYGTTIITETIDHVDF---STQPFKLFTEEG----------KEVLTKSVIIATGA 119 (314)
T ss_dssp --TCTT---CEEHHHHHHHHHHHHHHTTCEEECCCEEEEEC---SSSSEEEEETTC----------CEEEEEEEEECCCE
T ss_pred --CCcc---cCCHHHHHHHHHHHHhhcCcEEEEeEEEEeec---CCCceEEEECCC----------eEEEEeEEEEcccc
Confidence 0001 24556677788888889999998887666652 233455555554 78999999999996
Q ss_pred Ch
Q 012488 210 NS 211 (462)
Q Consensus 210 ~S 211 (462)
..
T Consensus 120 ~~ 121 (314)
T 4a5l_A 120 TA 121 (314)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 72
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.17 E-value=1.2e-10 Score=110.84 Aligned_cols=114 Identities=20% Similarity=0.242 Sum_probs=81.9
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEec
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDI 127 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (462)
.+++||+|||||++|+++|+.|+++|++|+|||++ .|+.+.. ......+
T Consensus 13 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~------~gg~~~~-------------------------~~~~~~~ 61 (323)
T 3f8d_A 13 GEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET------PGGQLTE-------------------------AGIVDDY 61 (323)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS------TTGGGGG-------------------------CCEECCS
T ss_pred CCccCEEEECccHHHHHHHHHHHHCCCcEEEEecc------CCCeecc-------------------------ccccccc
Confidence 34689999999999999999999999999999987 1221110 0000000
Q ss_pred cCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcceeEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecC
Q 012488 128 GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGAD 207 (462)
Q Consensus 128 ~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~Ad 207 (462)
.... .+....+.+.+.+.+++.|++++...|.++.. +++.+.+...++ .++.+|.||.|+
T Consensus 62 ----~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~---~~~~~~v~~~~g----------~~~~~d~lvlAt 121 (323)
T 3f8d_A 62 ----LGLI---EIQASDMIKVFNKHIEKYEVPVLLDIVEKIEN---RGDEFVVKTKRK----------GEFKADSVILGI 121 (323)
T ss_dssp ----TTST---TEEHHHHHHHHHHHHHTTTCCEEESCEEEEEE---C--CEEEEESSS----------CEEEEEEEEECC
T ss_pred ----CCCC---CCCHHHHHHHHHHHHHHcCCEEEEEEEEEEEe---cCCEEEEEECCC----------CEEEcCEEEECc
Confidence 0011 14567788889999999999998855888873 344577777665 689999999999
Q ss_pred CCChH
Q 012488 208 GANSR 212 (462)
Q Consensus 208 G~~S~ 212 (462)
|....
T Consensus 122 G~~~~ 126 (323)
T 3f8d_A 122 GVKRR 126 (323)
T ss_dssp CCEEC
T ss_pred CCCCc
Confidence 98754
No 73
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.16 E-value=5.3e-09 Score=106.10 Aligned_cols=64 Identities=11% Similarity=0.035 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCCChHhhhhhcC
Q 012488 144 VLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINA 219 (462)
Q Consensus 144 ~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S~vr~~l~~ 219 (462)
.+-+.|.+.+++.|++|+.++ |++|.. +.+....|.+.+| .++.||.||.+.+.....++.++.
T Consensus 222 ~l~~aL~~~~~~~Gg~I~~~~~V~~I~~--~~~~~~gV~~~~g----------~~~~ad~VV~~a~~~~~~~~Ll~~ 286 (501)
T 4dgk_A 222 ALVQGMIKLFQDLGGEVVLNARVSHMET--TGNKIEAVHLEDG----------RRFLTQAVASNADVVHTYRDLLSQ 286 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEE--ETTEEEEEEETTS----------CEEECSCEEECCC-----------
T ss_pred chHHHHHHHHHHhCCceeeecceeEEEe--eCCeEEEEEecCC----------cEEEcCEEEECCCHHHHHHHhccc
Confidence 455678888899999999998 999984 2333334778777 799999999998888777766643
No 74
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.16 E-value=9.8e-11 Score=119.77 Aligned_cols=140 Identities=16% Similarity=0.119 Sum_probs=86.5
Q ss_pred CCCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEe
Q 012488 47 TNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVD 126 (462)
Q Consensus 47 ~~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 126 (462)
..+++||+|||||++|+++|+.|++.|++|+|||+++.. |+..... ...|+..++...... +.+ .. .
T Consensus 18 ~~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~----GGtw~~~--~ypg~~~dv~s~~y~-~~f---~~---~ 84 (549)
T 4ap3_A 18 GTTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGV----GGVWYWN--RYPGARCDVESIDYS-YSF---SP---E 84 (549)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS----CTHHHHC--CCTTCBCSSCTTTSS-CCS---CH---H
T ss_pred CCCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCC----CCccccC--CCCCceeCCCchhcc-ccc---cc---c
Confidence 345689999999999999999999999999999998632 2100000 000000000000000 000 00 0
Q ss_pred ccCcccCCCeEEeeehHHHHHHHHHHHHHCCC--EEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEE
Q 012488 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGA--SVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAV 203 (462)
Q Consensus 127 ~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv--~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlv 203 (462)
......... ....+..+.++|.+.+++.|+ .+++++ |+++... ++...+.|++.+| .++++|.|
T Consensus 85 ~~~~~~~~~--~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~-~~~~~w~V~~~~G----------~~i~ad~l 151 (549)
T 4ap3_A 85 LEQEWNWSE--KYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLD-EEGLRWTVRTDRG----------DEVSARFL 151 (549)
T ss_dssp HHHHCCCSS--SSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEE-TTTTEEEEEETTC----------CEEEEEEE
T ss_pred cccCCCCcc--CCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEc-CCCCEEEEEECCC----------CEEEeCEE
Confidence 000000001 135778899999999999997 788887 9988752 2334678888776 68999999
Q ss_pred EecCCCChH
Q 012488 204 IGADGANSR 212 (462)
Q Consensus 204 I~AdG~~S~ 212 (462)
|.|+|..|.
T Consensus 152 V~AtG~~s~ 160 (549)
T 4ap3_A 152 VVAAGPLSN 160 (549)
T ss_dssp EECCCSEEE
T ss_pred EECcCCCCC
Confidence 999997664
No 75
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.16 E-value=1.6e-10 Score=117.99 Aligned_cols=133 Identities=16% Similarity=0.113 Sum_probs=87.2
Q ss_pred CCccEEEECCchHHHHHHHHHH-HCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCc-eEe
Q 012488 49 RNLRVAVIGGGPAGGAAAETLA-KNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNV-AVD 126 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~-~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~-~~~ 126 (462)
+++||+|||||++|+++|+.|+ +.|++|+|||+++.. |+... .....+.....+... ...
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~----GGtw~--------------~~~ypg~~~d~~s~~~~~~ 68 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGP----GGTWY--------------WNRYPGALSDTESHLYRFS 68 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSS----CTHHH--------------HCCCTTCEEEEEGGGSSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCC----CCccc--------------ccCCCCceecCCcceeeec
Confidence 4589999999999999999999 899999999998632 21100 000000000000000 000
Q ss_pred cc----CcccCCCeEEeeehHHHHHHHHHHHHHCCC--EEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEE
Q 012488 127 IG----QTLKPHEYIGMVRREVLDAYLRERAEKNGA--SVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLE 199 (462)
Q Consensus 127 ~~----~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv--~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 199 (462)
+. ...... .....+..+.++|.+.+++.|+ .+++++ |+++... ++.+.+.|++.+| .+++
T Consensus 69 ~~~~~~~~~~~~--~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~-~~~~~~~V~~~~G----------~~i~ 135 (540)
T 3gwf_A 69 FDRDLLQESTWK--TTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYL-DDENLWEVTTDHG----------EVYR 135 (540)
T ss_dssp SCHHHHHHCCCS--BSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEE-TTTTEEEEEETTS----------CEEE
T ss_pred cccccccCCCCc--ccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEe-CCCCEEEEEEcCC----------CEEE
Confidence 00 000001 1146888999999999999998 788877 9888752 2234678888776 6899
Q ss_pred ecEEEecCCCChH
Q 012488 200 VDAVIGADGANSR 212 (462)
Q Consensus 200 adlvI~AdG~~S~ 212 (462)
+|.||.|+|..|.
T Consensus 136 ad~lV~AtG~~s~ 148 (540)
T 3gwf_A 136 AKYVVNAVGLLSA 148 (540)
T ss_dssp EEEEEECCCSCCS
T ss_pred eCEEEECCccccc
Confidence 9999999998764
No 76
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.16 E-value=1.4e-10 Score=115.97 Aligned_cols=151 Identities=18% Similarity=0.241 Sum_probs=86.5
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCC--cEEEEcCCCCCCCCcccccC--ccccccCCCChh--------hH--------
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGV--ETFLIERKLDNCKPCGGAIP--LCMVGEFDLPLD--------II-------- 108 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~--~v~v~E~~~~~~~~~g~~i~--~~~l~~~g~~~~--------~~-------- 108 (462)
+.+||+||||||+|+++|..|++.|+ +|+|||+.+.. |+... ...-..+.++.. +.
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~----GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~ 80 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSP----GGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVY 80 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSS----STTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCC----CCeecCCCCCCcccccccccccccccccccccccCCc
Confidence 45799999999999999999999999 99999998632 11110 000000111100 00
Q ss_pred -hcccceEEEEcCCCceEeccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccC
Q 012488 109 -DRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYD 186 (462)
Q Consensus 109 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~ 186 (462)
...+..+....+. ....+.....+......+.+..+.++|.+.+++.+..+++++ |+++.. .++.+.|++.+..
T Consensus 81 ~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~---~~~~~~V~~~~~~ 156 (447)
T 2gv8_A 81 PSPLYRDLQTNTPI-ELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEK---KDGSWVVTYKGTK 156 (447)
T ss_dssp CCCCCTTCBCSSCH-HHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEE---ETTEEEEEEEESS
T ss_pred cCchhhhhccCCCH-HHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEe---CCCeEEEEEeecC
Confidence 0000000000000 000000000000111246788899999999988888888887 988873 2345778776620
Q ss_pred CccCCCCc-eeEEEecEEEecCCCChH
Q 012488 187 GTKGGVGE-KRTLEVDAVIGADGANSR 212 (462)
Q Consensus 187 ~~~~~~~~-~~~~~adlvI~AdG~~S~ 212 (462)
+|+ ..++.+|.||.|+|.+|.
T Consensus 157 -----~G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 157 -----AGSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp -----TTCCEEEEEESEEEECCCSSSS
T ss_pred -----CCCeeEEEEeCEEEECCCCCCC
Confidence 122 247999999999999775
No 77
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.16 E-value=3.2e-09 Score=114.33 Aligned_cols=68 Identities=12% Similarity=0.120 Sum_probs=50.9
Q ss_pred eeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCE-EEEEeccCCccCCCCceeEEEecEEEecCCCChH-hhh
Q 012488 139 MVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPY-VLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSR-VAK 215 (462)
Q Consensus 139 ~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S~-vr~ 215 (462)
.++...+...|.+.+++.|++++.++ |+++.. +++.+ .|.+.+ .+++||.||.|+|.+|. +.+
T Consensus 147 ~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~---~~~~v~~V~t~~-----------G~i~Ad~VV~AaG~~s~~l~~ 212 (830)
T 1pj5_A 147 LASAARAVQLLIKRTESAGVTYRGSTTVTGIEQ---SGGRVTGVQTAD-----------GVIPADIVVSCAGFWGAKIGA 212 (830)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEE---ETTEEEEEEETT-----------EEEECSEEEECCGGGHHHHHH
T ss_pred eEcHHHHHHHHHHHHHHcCCEEECCceEEEEEE---eCCEEEEEEECC-----------cEEECCEEEECCccchHHHHH
Confidence 46778899999999999999999887 999873 22333 344433 37999999999999985 345
Q ss_pred hhcCC
Q 012488 216 SINAG 220 (462)
Q Consensus 216 ~l~~~ 220 (462)
.++..
T Consensus 213 ~~g~~ 217 (830)
T 1pj5_A 213 MIGMA 217 (830)
T ss_dssp TTTCC
T ss_pred HhCCC
Confidence 55543
No 78
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.16 E-value=5.7e-10 Score=105.28 Aligned_cols=155 Identities=13% Similarity=0.120 Sum_probs=85.9
Q ss_pred CCCccEEEECCchHHHHHHHHHHHC--CCcEEEEcCCCCCC--CCcccccCccccccCCCChhhHhcccceEEEEcCCCc
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKN--GVETFLIERKLDNC--KPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNV 123 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~--g~~v~v~E~~~~~~--~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 123 (462)
..++||+||||||+|+++|+.|+++ |++|+|+|+.+... ..+++......+.+-.. ..++.. .+.
T Consensus 63 ~~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~-~~~L~~----------~Gv 131 (326)
T 2gjc_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPA-HLFLQE----------LEI 131 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTT-HHHHHH----------TTC
T ss_pred cCcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHH-HHHHHh----------hCc
Confidence 3457999999999999999999998 99999999987321 01111111000000000 011110 000
Q ss_pred eEeccCcccCCCeEEeeehHHHHHHHHHHHHHC-CCEEEcce-eEEEEecCCCC-C--CE-EEEEecc----CCccCCCC
Q 012488 124 AVDIGQTLKPHEYIGMVRREVLDAYLRERAEKN-GASVINGL-FMKMDLPRNFE-Q--PY-VLYYTEY----DGTKGGVG 193 (462)
Q Consensus 124 ~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~-gv~i~~~~-v~~~~~~~~~~-~--~~-~v~~~~~----~~~~~~~~ 193 (462)
.+.. ...+....+...+...|.+.+.+. |++++.+. |.++....+.+ + .+ .|.+... ++......
T Consensus 132 ~~~~-----~g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~ 206 (326)
T 2gjc_A 132 PYED-----EGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCM 206 (326)
T ss_dssp CCEE-----CSSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCC
T ss_pred cccc-----CCCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceecc
Confidence 0000 012222224567788888888885 89999988 98887532112 2 22 2322210 00000112
Q ss_pred ceeEEEe---------------cEEEecCCCChHhhhhhc
Q 012488 194 EKRTLEV---------------DAVIGADGANSRVAKSIN 218 (462)
Q Consensus 194 ~~~~~~a---------------dlvI~AdG~~S~vr~~l~ 218 (462)
+..++.| ++||+|+|..|.+..++.
T Consensus 207 d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~ 246 (326)
T 2gjc_A 207 DPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCA 246 (326)
T ss_dssp CCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHHH
T ss_pred CceEEEEeeccccccccccccCCEEEECcCCCchHHHHHH
Confidence 4478999 999999999998877664
No 79
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.16 E-value=1.4e-10 Score=110.05 Aligned_cols=114 Identities=24% Similarity=0.323 Sum_probs=80.8
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC-cEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGV-ETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
+||+||||||+|+++|+.|++.|+ +|+|+|++. .|+..... .. .. .+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-----~gg~~~~~--~~-----------~~------------~~-- 49 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-----PGGQITGS--SE-----------IE------------NY-- 49 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-----TTCGGGGC--SC-----------BC------------CS--
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-----CCcccccc--cc-----------cc------------cC--
Confidence 699999999999999999999999 999999853 22211100 00 00 00
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcceeEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGA 209 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~ 209 (462)
..... .+.+..+.+.|.+.+++.|++++.++|.++.. +++.+.+.+.++ .++++|.||.|+|.
T Consensus 50 --~~~~~--~~~~~~~~~~l~~~~~~~~v~~~~~~v~~i~~---~~~~~~v~~~~g----------~~~~~~~vv~AtG~ 112 (311)
T 2q0l_A 50 --PGVKE--VVSGLDFMQPWQEQCFRFGLKHEMTAVQRVSK---KDSHFVILAEDG----------KTFEAKSVIIATGG 112 (311)
T ss_dssp --TTCCS--CBCHHHHHHHHHHHHHTTSCEEECSCEEEEEE---ETTEEEEEETTS----------CEEEEEEEEECCCE
T ss_pred --CCCcc--cCCHHHHHHHHHHHHHHcCCEEEEEEEEEEEE---cCCEEEEEEcCC----------CEEECCEEEECCCC
Confidence 00000 35667788889888989999999866888873 233466766655 68999999999998
Q ss_pred ChHh
Q 012488 210 NSRV 213 (462)
Q Consensus 210 ~S~v 213 (462)
++..
T Consensus 113 ~~~~ 116 (311)
T 2q0l_A 113 SPKR 116 (311)
T ss_dssp EECC
T ss_pred CCCC
Confidence 7654
No 80
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.14 E-value=3e-09 Score=103.20 Aligned_cols=36 Identities=33% Similarity=0.544 Sum_probs=33.8
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.+++||+|||||++|+++|+.|+++|++|+|+|+..
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 456899999999999999999999999999999986
No 81
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.13 E-value=4.4e-10 Score=115.12 Aligned_cols=139 Identities=17% Similarity=0.080 Sum_probs=85.9
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCccc-ccCccccccCCCChhhHhcccceEEEEcCCCceEe
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGG-AIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVD 126 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~-~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 126 (462)
+.++||+|||||++|+++|+.|++.|++|+|||+++...-.+.. .++...+ ...... ..+.+ .+. .
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~---d~~~~~-----~~~~f-~~~---~- 80 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARC---DIESIE-----YCYSF-SEE---V- 80 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBC---SSCTTT-----SSCCS-CHH---H-
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceee---cccccc-----ccccc-Chh---h-
Confidence 44689999999999999999999999999999998632110000 0110000 000000 00000 000 0
Q ss_pred ccCcccCCCeEEeeehHHHHHHHHHHHHHCC--CEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEE
Q 012488 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNG--ASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAV 203 (462)
Q Consensus 127 ~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~g--v~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlv 203 (462)
. ....... ....+..+.++|...+++.+ ..+++++ |.++.... +.+.+.|++.+| .+++||.|
T Consensus 81 ~-~~~~~~~--~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~-~~~~w~V~~~~G----------~~~~ad~v 146 (542)
T 1w4x_A 81 L-QEWNWTE--RYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDE-ATNTWTVDTNHG----------DRIRARYL 146 (542)
T ss_dssp H-HHCCCCB--SSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEET-TTTEEEEEETTC----------CEEEEEEE
T ss_pred h-hccCccc--ccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcC-CCCeEEEEECCC----------CEEEeCEE
Confidence 0 0000000 13567888899998888876 5788887 98887522 234577877665 68999999
Q ss_pred EecCCCChHh
Q 012488 204 IGADGANSRV 213 (462)
Q Consensus 204 I~AdG~~S~v 213 (462)
|.|+|.+|.-
T Consensus 147 V~AtG~~s~p 156 (542)
T 1w4x_A 147 IMASGQLSVP 156 (542)
T ss_dssp EECCCSCCCC
T ss_pred EECcCCCCCC
Confidence 9999988753
No 82
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.12 E-value=2.9e-10 Score=108.65 Aligned_cols=118 Identities=26% Similarity=0.290 Sum_probs=81.3
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEecc
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (462)
+.+||+||||||+|+++|+.|++.|++|+|+|+.. .|+.+... .. .. .+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-----~gg~~~~~--~~-----------~~------------~~- 55 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM-----PGGQIAWS--EE-----------VE------------NF- 55 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-----TTGGGGGC--SC-----------BC------------CS-
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC-----CCcccccc--cc-----------cc------------cC-
Confidence 35799999999999999999999999999999973 12211100 00 00 00
Q ss_pred CcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcceeEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 129 QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 129 ~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
..... .+.+..+.+.+.+.+++.|++++.+.|.++......+..+.|.+.++ .++++|.||.|+|
T Consensus 56 ---~~~~~--~~~~~~~~~~l~~~~~~~gv~~~~~~v~~i~~~~~~~~~~~v~~~~g----------~~~~~~~vv~AtG 120 (325)
T 2q7v_A 56 ---PGFPE--PIAGMELAQRMHQQAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYN----------GEYRAKAVILATG 120 (325)
T ss_dssp ---TTCSS--CBCHHHHHHHHHHHHHHTTCEEEECCEEEEEECTTSSSCCEEEEESS----------CEEEEEEEEECCC
T ss_pred ---CCCCC--CCCHHHHHHHHHHHHHHcCCEEEeeeEEEEEeccCCCceEEEEECCC----------CEEEeCEEEECcC
Confidence 00000 24566788889999999999998877888874100111266666665 6899999999999
Q ss_pred CChH
Q 012488 209 ANSR 212 (462)
Q Consensus 209 ~~S~ 212 (462)
.++.
T Consensus 121 ~~~~ 124 (325)
T 2q7v_A 121 ADPR 124 (325)
T ss_dssp EEEC
T ss_pred CCcC
Confidence 8654
No 83
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.12 E-value=3.9e-09 Score=101.92 Aligned_cols=33 Identities=24% Similarity=0.386 Sum_probs=31.4
Q ss_pred ccEEEECCchHHHHHHHHHHHCC------CcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNG------VETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g------~~v~v~E~~~ 83 (462)
+||+|||||++||++|+.|+++| ++|+|+|+..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 49999999999999999999998 9999999986
No 84
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.11 E-value=2.5e-10 Score=109.24 Aligned_cols=116 Identities=20% Similarity=0.208 Sum_probs=82.3
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.+||+|||||++|+++|+.|++.|++|+|||+.+.. |+... .......++ .+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~----gG~~~---------------~~~~~~~~~-------~~-- 58 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQL----GGQLS---------------ALYPEKYIY-------DV-- 58 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS----CHHHH---------------HHCTTSEEC-------CS--
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCC----Cceeh---------------hcCCCceEe-------cc--
Confidence 479999999999999999999999999999998631 21110 000000010 01
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
.... .+....+...+.+.+++.|++++.++ |.++.. ..++.+.|.+.++ ++.+|.||.|+|
T Consensus 59 --~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~--~~~~~~~v~~~~g-----------~~~~d~vVlAtG 120 (332)
T 3lzw_A 59 --AGFP---KIRAQELINNLKEQMAKFDQTICLEQAVESVEK--QADGVFKLVTNEE-----------THYSKTVIITAG 120 (332)
T ss_dssp --TTCS---SEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEE--CTTSCEEEEESSE-----------EEEEEEEEECCT
T ss_pred --CCCC---CCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEE--CCCCcEEEEECCC-----------EEEeCEEEECCC
Confidence 0011 24667888999999999999999876 998873 3333678877664 399999999999
Q ss_pred CCh
Q 012488 209 ANS 211 (462)
Q Consensus 209 ~~S 211 (462)
.++
T Consensus 121 ~~~ 123 (332)
T 3lzw_A 121 NGA 123 (332)
T ss_dssp TSC
T ss_pred CCc
Confidence 855
No 85
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.11 E-value=4.4e-10 Score=107.89 Aligned_cols=115 Identities=28% Similarity=0.268 Sum_probs=80.3
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEec
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDI 127 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (462)
.+.+||+||||||+|+++|+.|++.|++|+|||+.. .|+.+... .. .. .+
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-----~gg~~~~~--~~-----------~~------------~~ 61 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-----FGGALMTT--TD-----------VE------------NY 61 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-----CSCGGGSC--SC-----------BC------------CS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-----CCCceecc--ch-----------hh------------hc
Confidence 346899999999999999999999999999999752 12211100 00 00 00
Q ss_pred cCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcceeEEEEecCCCCCCEEE-EEeccCCccCCCCceeEEEecEEEec
Q 012488 128 GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVL-YYTEYDGTKGGVGEKRTLEVDAVIGA 206 (462)
Q Consensus 128 ~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~v~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~~~adlvI~A 206 (462)
..... .+.+..+.+.|.+.+++.|++++.+++.++.. ++.+.| .+.++ .++++|.||.|
T Consensus 62 ----~~~~~--~~~~~~~~~~l~~~~~~~~v~~~~~~v~~i~~----~~~~~v~~~~~g----------~~~~~d~lviA 121 (335)
T 2a87_A 62 ----PGFRN--GITGPELMDEMREQALRFGADLRMEDVESVSL----HGPLKSVVTADG----------QTHRARAVILA 121 (335)
T ss_dssp ----TTCTT--CBCHHHHHHHHHHHHHHTTCEEECCCEEEEEC----SSSSEEEEETTS----------CEEEEEEEEEC
T ss_pred ----CCCCC--CCCHHHHHHHHHHHHHHcCCEEEEeeEEEEEe----CCcEEEEEeCCC----------CEEEeCEEEEC
Confidence 00000 14456788888888889999999888888873 334566 55554 68999999999
Q ss_pred CCCChH
Q 012488 207 DGANSR 212 (462)
Q Consensus 207 dG~~S~ 212 (462)
+|.++.
T Consensus 122 tG~~~~ 127 (335)
T 2a87_A 122 MGAAAR 127 (335)
T ss_dssp CCEEEC
T ss_pred CCCCcc
Confidence 998664
No 86
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.10 E-value=2.7e-10 Score=107.79 Aligned_cols=111 Identities=14% Similarity=0.166 Sum_probs=73.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
+|||+||||||||+++|+.|+|+|++|+|||++.. |+.+.. . ..+ +
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~-----gg~~~~----~-----------~~~------------~-- 51 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTN-----RNRVTQ----N-----------SHG------------F-- 51 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC-----GGGGSS----C-----------BCC------------S--
T ss_pred CcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC-----CCeeee----e-----------cCC------------c--
Confidence 58999999999999999999999999999998742 222110 0 000 0
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCC-CEEEcceeEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNG-ASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~g-v~i~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
.... .+....+.+...+.+.+.+ +.++.+.+..+.. .+.+.+.+...++ .++++|.||.|+|
T Consensus 52 --~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~g----------~~~~a~~liiATG 114 (304)
T 4fk1_A 52 --ITRD---GIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITK--QSTGLFEIVTKDH----------TKYLAERVLLATG 114 (304)
T ss_dssp --TTCT---TBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEE--CTTSCEEEEETTC----------CEEEEEEEEECCC
T ss_pred --cCCC---CCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeee--cCCCcEEEEECCC----------CEEEeCEEEEccC
Confidence 0000 1223345555556666655 5666666666652 3444577777776 7999999999999
Q ss_pred CCh
Q 012488 209 ANS 211 (462)
Q Consensus 209 ~~S 211 (462)
...
T Consensus 115 s~p 117 (304)
T 4fk1_A 115 MQE 117 (304)
T ss_dssp CEE
T ss_pred Ccc
Confidence 754
No 87
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.09 E-value=8.9e-10 Score=112.04 Aligned_cols=60 Identities=20% Similarity=0.184 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCE-EEEEeccCCccCCCCceeEEEec-EEEecCCCChH
Q 012488 144 VLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPY-VLYYTEYDGTKGGVGEKRTLEVD-AVIGADGANSR 212 (462)
Q Consensus 144 ~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~ad-lvI~AdG~~S~ 212 (462)
.+.+.|.+.+++.|++|++++ |+++.. ++++.+ .|.+.++ ++..+++|+ .||.|+|..+.
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~--~~~g~v~GV~~~~~-------g~~~~i~A~k~VVlAtGG~~~ 265 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVT--DDTGRVVGIVAKQY-------GKEVAVRARRGVVLATGSFAY 265 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEE--CTTCCEEEEEEEET-------TEEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEE--CCCCcEEEEEEEEC-------CcEEEEEeCCeEEEeCCChhh
Confidence 788899999999999999998 999884 323333 3555443 444679995 99999999983
No 88
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.09 E-value=5.2e-10 Score=106.50 Aligned_cols=114 Identities=27% Similarity=0.371 Sum_probs=79.7
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEecc
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (462)
+++||+||||||+|+++|+.|++.|++|+|||+.. . |+.+... .. .. .+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~----~-gg~~~~~--~~-----------~~------------~~- 52 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGME----K-GGQLTTT--TE-----------VE------------NW- 52 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS----T-TGGGGGC--SB-----------CC------------CS-
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC----C-CceEecc--hh-----------hh------------hC-
Confidence 35799999999999999999999999999999652 1 2211100 00 00 00
Q ss_pred CcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcceeEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 129 QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 129 ~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
..... .+.+..+.+.+.+.+++.|++++.+++..++. .++.+.+ +.++ .++.+|.||.|+|
T Consensus 53 ---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~---~~~~~~v-~~~~----------~~~~~~~lv~AtG 113 (320)
T 1trb_A 53 ---PGDPN--DLTGPLLMERMHEHATKFETEIIFDHINKVDL---QNRPFRL-NGDN----------GEYTCDALIIATG 113 (320)
T ss_dssp ---TTCCS--SCBHHHHHHHHHHHHHHTTCEEECCCEEEEEC---SSSSEEE-EESS----------CEEEEEEEEECCC
T ss_pred ---CCCCC--CCCHHHHHHHHHHHHHHCCCEEEEeeeeEEEe---cCCEEEE-EeCC----------CEEEcCEEEECCC
Confidence 00000 14556788888888999999999888887772 3345666 5555 6899999999999
Q ss_pred CChH
Q 012488 209 ANSR 212 (462)
Q Consensus 209 ~~S~ 212 (462)
.++.
T Consensus 114 ~~~~ 117 (320)
T 1trb_A 114 ASAR 117 (320)
T ss_dssp EEEC
T ss_pred CCcC
Confidence 8654
No 89
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.08 E-value=1.3e-08 Score=102.63 Aligned_cols=34 Identities=32% Similarity=0.453 Sum_probs=32.2
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC--cEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGV--ETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~--~v~v~E~~~ 83 (462)
.+||+|||||++||++|+.|+++|+ +|+|+|+++
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~ 37 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSE 37 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSS
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCC
Confidence 4699999999999999999999999 999999976
No 90
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.08 E-value=5.2e-10 Score=106.02 Aligned_cols=115 Identities=24% Similarity=0.282 Sum_probs=81.1
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
++||+||||||+|+++|+.|++.|++|+|+|+.. |+... ...+ +. .+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~------gG~~~----~~~~--------------~~-------~~-- 47 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERF------GGQIL----DTVD--------------IE-------NY-- 47 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSST------TGGGG----GCCE--------------EC-------CB--
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC------Cceec----cccc--------------cc-------cc--
Confidence 3799999999999999999999999999998642 21110 0000 00 00
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
.... ...+..+.+.+.+.+++.|++++.++ |..+.....+++.+.|.+.++ .++++|.||.|+|
T Consensus 48 --~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g----------~~~~~~~lv~AtG 112 (310)
T 1fl2_A 48 --ISVP---KTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASG----------AVLKARSIIVATG 112 (310)
T ss_dssp --TTBS---SEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTS----------CEEEEEEEEECCC
T ss_pred --cCcC---CCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCC----------CEEEeCEEEECcC
Confidence 0001 23566788888888888999999995 888873222233577777665 6899999999999
Q ss_pred CChH
Q 012488 209 ANSR 212 (462)
Q Consensus 209 ~~S~ 212 (462)
.++.
T Consensus 113 ~~~~ 116 (310)
T 1fl2_A 113 AKWR 116 (310)
T ss_dssp EEEC
T ss_pred CCcC
Confidence 8764
No 91
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.08 E-value=4.2e-10 Score=107.21 Aligned_cols=113 Identities=17% Similarity=0.216 Sum_probs=78.3
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEecc
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (462)
+++||+||||||+|+++|+.|+++|++|+|+|+.. .|+.+... . ... .+.
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-----~gg~~~~~--------~-----~~~------------~~~ 64 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-----AGGLTAEA--------P-----LVE------------NYL 64 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-----TTGGGGGC--------S-----CBC------------CBT
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-----CCcccccc--------c-----hhh------------hcC
Confidence 46899999999999999999999999999999853 12211100 0 000 000
Q ss_pred CcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcceeEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 129 QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 129 ~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
. + ..+.+..+.+.+.+.+++.|++++.+.|.++.. +++.+.|.+ ++ .++.+|.||.|+|
T Consensus 65 ----~--~-~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~---~~~~~~v~~-~~----------~~~~~~~li~AtG 123 (319)
T 3cty_A 65 ----G--F-KSIVGSELAKLFADHAANYAKIREGVEVRSIKK---TQGGFDIET-ND----------DTYHAKYVIITTG 123 (319)
T ss_dssp ----T--B-SSBCHHHHHHHHHHHHHTTSEEEETCCEEEEEE---ETTEEEEEE-SS----------SEEEEEEEEECCC
T ss_pred ----C--C-cccCHHHHHHHHHHHHHHcCCEEEEeeEEEEEE---eCCEEEEEE-CC----------CEEEeCEEEECCC
Confidence 0 0 023456677888888888999998866888873 223455654 43 5799999999999
Q ss_pred CChH
Q 012488 209 ANSR 212 (462)
Q Consensus 209 ~~S~ 212 (462)
.++.
T Consensus 124 ~~~~ 127 (319)
T 3cty_A 124 TTHK 127 (319)
T ss_dssp EEEC
T ss_pred CCcc
Confidence 7654
No 92
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.06 E-value=2e-08 Score=101.20 Aligned_cols=36 Identities=36% Similarity=0.598 Sum_probs=32.2
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..++||+|||||++||++|+.|+++|++|+|+|+++
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~ 49 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSA 49 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 345799999999999999999999999999999987
No 93
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.06 E-value=2.9e-10 Score=114.18 Aligned_cols=152 Identities=20% Similarity=0.276 Sum_probs=87.6
Q ss_pred CccEEEECCchHHHHHHHHHHH---CCCc---EEEEcCCCCCCCCcccccCc---cccccCCCChhhHhcccceEEEEcC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAK---NGVE---TFLIERKLDNCKPCGGAIPL---CMVGEFDLPLDIIDRKVTKMKMISP 120 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~---~g~~---v~v~E~~~~~~~~~g~~i~~---~~l~~~g~~~~~~~~~~~~~~~~~~ 120 (462)
.+||+||||||+|+++|..|++ .|++ |+|||+.+.. |+.... ..+..++++.. ...+.......+
T Consensus 2 ~~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~----GG~w~~~~~~g~~~~g~~~~--~~~y~~l~~~~~ 75 (464)
T 2xve_A 2 ATRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADW----GGQWNYTWRTGLDENGEPVH--SSMYRYLWSNGP 75 (464)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSS----CGGGSCCSCCSBCTTSSBCC--CCCCTTCBCSSC
T ss_pred CCcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCC----CCEeecCCCCCccccCCCCc--CccccchhhcCC
Confidence 3699999999999999999999 9999 9999998632 211100 00111111100 000000000000
Q ss_pred CCc----eEeccCcccCCCeEEeeehHHHHHHHHHHHHHCCCE--EEcce-eEEEEecCCCCCCEEEEEeccCCccCCCC
Q 012488 121 SNV----AVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGAS--VINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVG 193 (462)
Q Consensus 121 ~~~----~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~--i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 193 (462)
... .+.+..... ......+++..+.++|.+.+++.|++ +++++ |+++.... ..+.+.|++.++ .++
T Consensus 76 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~-~~~~~~V~~~~~-----~~g 148 (464)
T 2xve_A 76 KECLEFADYTFDEHFG-KPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNE-DSQTFTVTVQDH-----TTD 148 (464)
T ss_dssp GGGTCBTTBCHHHHHS-SCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEET-TTTEEEEEEEET-----TTT
T ss_pred hhhcccCCCCCCcccC-CCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcC-CCCcEEEEEEEc-----CCC
Confidence 000 000000000 00011367888999999999998987 88877 98887421 223577877663 123
Q ss_pred ceeEEEecEEEecCCCChHhh
Q 012488 194 EKRTLEVDAVIGADGANSRVA 214 (462)
Q Consensus 194 ~~~~~~adlvI~AdG~~S~vr 214 (462)
+..++.+|.||.|+|.+|.-+
T Consensus 149 ~~~~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 149 TIYSEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp EEEEEEESEEEECCCSSSSBC
T ss_pred ceEEEEcCEEEECCCCCCCCc
Confidence 346789999999999766543
No 94
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.05 E-value=1.1e-09 Score=103.90 Aligned_cols=114 Identities=30% Similarity=0.333 Sum_probs=71.0
Q ss_pred CCCCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceE
Q 012488 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAV 125 (462)
Q Consensus 46 ~~~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 125 (462)
|+.++|||+||||||||+++|+.|++.|++|+|||+... .|.++.... +.
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~----gG~~~~~~~--------------i~------------ 51 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIP----GGQMANTEE--------------VE------------ 51 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT----TGGGGGCSC--------------BC------------
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC----CCeeecccc--------------cC------------
Confidence 677899999999999999999999999999999998642 121111000 00
Q ss_pred eccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEE
Q 012488 126 DIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVI 204 (462)
Q Consensus 126 ~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI 204 (462)
.+ .... .+...++.........+.+..+..+. +.... ... ..+...++ .++++|.||
T Consensus 52 ~~----p~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~----------~~~~~d~li 109 (312)
T 4gcm_A 52 NF----PGFE---MITGPDLSTKMFEHAKKFGAVYQYGDIKSVED----KGE-YKVINFGN----------KELTAKAVI 109 (312)
T ss_dssp CS----TTCS---SBCHHHHHHHHHHHHHHTTCEEEECCCCEEEE----CSS-CEEEECSS----------CEEEEEEEE
T ss_pred Cc----CCcc---ccchHHHHHHHHHHHhhccccccceeeeeeee----eec-ceeeccCC----------eEEEeceeE
Confidence 00 0001 13334555666666677777777665 33333 122 22333333 789999999
Q ss_pred ecCCCCh
Q 012488 205 GADGANS 211 (462)
Q Consensus 205 ~AdG~~S 211 (462)
.|+|...
T Consensus 110 iAtGs~~ 116 (312)
T 4gcm_A 110 IATGAEY 116 (312)
T ss_dssp ECCCEEE
T ss_pred EcccCcc
Confidence 9999644
No 95
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.05 E-value=2.5e-10 Score=116.62 Aligned_cols=137 Identities=15% Similarity=0.089 Sum_probs=87.3
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCcccc--ccCCCChhhHhcccceEEEEcCCCceE
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMV--GEFDLPLDIIDRKVTKMKMISPSNVAV 125 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l--~~~g~~~~~~~~~~~~~~~~~~~~~~~ 125 (462)
.+++||+|||||++|+++|+.|++.|++|+|||+++.. |+....... ..+..+....... +.+.-.
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~----GGtw~~~~yPg~~~d~~~~~y~~~------f~~~~~-- 74 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDV----GGTWYWNRYPGCRLDTESYAYGYF------ALKGII-- 74 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS----CTHHHHCCCTTCBCSSCHHHHCHH------HHTTSS--
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCC----CCccccCCCCceeecCchhhcccc------cCcccc--
Confidence 34689999999999999999999999999999998632 211100000 0001111110000 000000
Q ss_pred eccCcccCCCeEEeeehHHHHHHHHHHHHHCCC--EEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecE
Q 012488 126 DIGQTLKPHEYIGMVRREVLDAYLRERAEKNGA--SVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDA 202 (462)
Q Consensus 126 ~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv--~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adl 202 (462)
...... .....+..+..++.+.+++.|+ .+++++ |.++... ++.+.+.|++.+| .++++|.
T Consensus 75 ---~~~~~~--~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~-~~~~~w~V~~~~G----------~~~~ad~ 138 (545)
T 3uox_A 75 ---PEWEWS--ENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYV-ENDRLWEVTLDNE----------EVVTCRF 138 (545)
T ss_dssp ---TTCCCS--BSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEE-GGGTEEEEEETTT----------EEEEEEE
T ss_pred ---cCCCcc--ccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEe-CCCCEEEEEECCC----------CEEEeCE
Confidence 000001 1136788899999999998886 788877 8888752 2334578888776 7899999
Q ss_pred EEecCCCChH
Q 012488 203 VIGADGANSR 212 (462)
Q Consensus 203 vI~AdG~~S~ 212 (462)
||.|+|..|.
T Consensus 139 lV~AtG~~s~ 148 (545)
T 3uox_A 139 LISATGPLSA 148 (545)
T ss_dssp EEECCCSCBC
T ss_pred EEECcCCCCC
Confidence 9999997664
No 96
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.04 E-value=4.3e-10 Score=115.83 Aligned_cols=158 Identities=18% Similarity=0.175 Sum_probs=87.7
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCC---CCcccccC---ccccccCCCCh---hhHhc---------
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC---KPCGGAIP---LCMVGEFDLPL---DIIDR--------- 110 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~---~~~g~~i~---~~~l~~~g~~~---~~~~~--------- 110 (462)
..+||+|||||++|+++|+.|++.|++|+|+|+.+... ...++++. ....+.+++.+ .+...
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIN 204 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 35799999999999999999999999999999987321 11223221 11111222211 11000
Q ss_pred -----------ccceEEEEcCCCce---Ee-ccCcccCCCeE---EeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEec
Q 012488 111 -----------KVTKMKMISPSNVA---VD-IGQTLKPHEYI---GMVRREVLDAYLRERAEKNGASVINGL-FMKMDLP 171 (462)
Q Consensus 111 -----------~~~~~~~~~~~~~~---~~-~~~~~~~~~~~---~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~ 171 (462)
....+.+....+.. +. .+....+..+. .......+...|.+.+++.|++|+.++ |+++..
T Consensus 205 ~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~- 283 (572)
T 1d4d_A 205 DPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILE- 283 (572)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEE-
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEE-
Confidence 00000000000000 00 00000000000 012355788999999999999999998 998873
Q ss_pred CCCCCCE-EEEEeccCCccCCCCceeEEEecEEEecCCCChHhh
Q 012488 172 RNFEQPY-VLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVA 214 (462)
Q Consensus 172 ~~~~~~~-~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S~vr 214 (462)
++++.+ .|.+.+. .|+..++.||.||.|+|..|..+
T Consensus 284 -~~~g~v~GV~~~~~------~G~~~~i~A~~VVlAtGg~~~~~ 320 (572)
T 1d4d_A 284 -DASGKVTGVLVKGE------YTGYYVIKADAVVIAAGGFAKNN 320 (572)
T ss_dssp -C--CCEEEEEEEET------TTEEEEEECSEEEECCCCCTTCH
T ss_pred -CCCCeEEEEEEEeC------CCcEEEEEcCEEEEeCCCCccCH
Confidence 231333 3555431 14445799999999999988643
No 97
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.04 E-value=6.2e-08 Score=98.73 Aligned_cols=35 Identities=34% Similarity=0.554 Sum_probs=32.9
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+++||+|||||++||++|..|+++|++|+|+|+++
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 37 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARD 37 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 35799999999999999999999999999999987
No 98
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.02 E-value=5.7e-08 Score=97.77 Aligned_cols=34 Identities=29% Similarity=0.354 Sum_probs=32.2
Q ss_pred CccEEEECCchHHHHHHHHHHHCC--CcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNG--VETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g--~~v~v~E~~~ 83 (462)
++||+|||||++||++|+.|+++| ++|+|+|+++
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~ 39 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGE 39 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence 469999999999999999999999 9999999976
No 99
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.98 E-value=2.8e-09 Score=103.55 Aligned_cols=136 Identities=19% Similarity=0.238 Sum_probs=80.8
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEcCCCCCCCCccccc--CccccccCCCChhhHhcccceEEEEcCCCceEe
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGV-ETFLIERKLDNCKPCGGAI--PLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVD 126 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~~~~~~~~g~~i--~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 126 (462)
++||+|||||++|+++|+.|++.|+ +|+|||+++ . |+.. .+.....+. ..+..... + +.........
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~----Gg~~~~~~~~~~~~~--~~~~~~~~-g--~~~~~~~~~~ 73 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-V----GHSFKHWPKSTRTIT--PSFTSNGF-G--MPDMNAISMD 73 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-T----THHHHTSCTTCBCSS--CCCCCGGG-T--CCCTTCSSTT
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-C----CCccccCcccccccC--cchhcccC-C--chhhhhcccc
Confidence 4799999999999999999999999 999999985 1 1110 000000000 00000000 0 0000000000
Q ss_pred ccCcc-cCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEE
Q 012488 127 IGQTL-KPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVI 204 (462)
Q Consensus 127 ~~~~~-~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI 204 (462)
..... .... .+.+..+...+.+.+++.|++++.++ |.++.. +++.+.|...++ ++.+|.||
T Consensus 74 ~~~~~~~~~~---~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~---~~~~~~v~~~~g-----------~~~~d~vV 136 (369)
T 3d1c_A 74 TSPAFTFNEE---HISGETYAEYLQVVANHYELNIFENTVVTNISA---DDAYYTIATTTE-----------TYHADYIF 136 (369)
T ss_dssp CCHHHHHCCS---SCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEE---CSSSEEEEESSC-----------CEEEEEEE
T ss_pred cccccccccc---CCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEE---CCCeEEEEeCCC-----------EEEeCEEE
Confidence 00000 0011 35667788888888999999999887 888873 233577765442 58999999
Q ss_pred ecCCCChH
Q 012488 205 GADGANSR 212 (462)
Q Consensus 205 ~AdG~~S~ 212 (462)
.|+|.++.
T Consensus 137 lAtG~~~~ 144 (369)
T 3d1c_A 137 VATGDYNF 144 (369)
T ss_dssp ECCCSTTS
T ss_pred ECCCCCCc
Confidence 99998763
No 100
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.98 E-value=1e-07 Score=96.51 Aligned_cols=34 Identities=38% Similarity=0.540 Sum_probs=32.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
++||+|||||++||++|+.|+++|++|+|+|+++
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~ 72 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARD 72 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4799999999999999999999999999999987
No 101
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.98 E-value=2.3e-09 Score=109.17 Aligned_cols=116 Identities=23% Similarity=0.282 Sum_probs=82.2
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEecc
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (462)
..+||+||||||||+++|+.|++.|++|+|+|+.. |+... ...++. .+.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~------GG~~~----~~~~~~---------------------~~~ 259 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF------GGQVL----DTVDIE---------------------NYI 259 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSST------TGGGT----TCSCBC---------------------CBT
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCC------CCccc----cccccc---------------------ccC
Confidence 46899999999999999999999999999998632 21111 011100 000
Q ss_pred CcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecC
Q 012488 129 QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGAD 207 (462)
Q Consensus 129 ~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~Ad 207 (462)
... ...+..+...|.+.+++.|++++.++ |..+.....+++.+.|++.+| .++++|.||.|+
T Consensus 260 ----~~~---~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g----------~~~~~d~vVlAt 322 (521)
T 1hyu_A 260 ----SVP---KTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASG----------AVLKARSIIIAT 322 (521)
T ss_dssp ----TBS---SBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTS----------CEEEEEEEEECC
T ss_pred ----CCC---CCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCC----------CEEEcCEEEECC
Confidence 000 13456788888888999999999995 988873222234577877666 689999999999
Q ss_pred CCChH
Q 012488 208 GANSR 212 (462)
Q Consensus 208 G~~S~ 212 (462)
|.++.
T Consensus 323 G~~~~ 327 (521)
T 1hyu_A 323 GAKWR 327 (521)
T ss_dssp CEEEC
T ss_pred CCCcC
Confidence 98654
No 102
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.94 E-value=2.4e-09 Score=107.56 Aligned_cols=152 Identities=15% Similarity=0.149 Sum_probs=87.2
Q ss_pred CCccEEEECCchHHHHHHHHHHHCC-----CcEEEEcCCCCCCCCccc-----ccCccccccCCCChhhHhcccceEEEE
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNG-----VETFLIERKLDNCKPCGG-----AIPLCMVGEFDLPLDIIDRKVTKMKMI 118 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g-----~~v~v~E~~~~~~~~~g~-----~i~~~~l~~~g~~~~~~~~~~~~~~~~ 118 (462)
..+||+||||||+|+++|+.|++.| ++|+|||+.+......+. .+....++.+..... .........+.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~-p~~~~~~~~~l 107 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRN-PTSPYSFVNYL 107 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTC-TTCTTSHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccC-CCCCCChhHhh
Confidence 4579999999999999999999999 999999999843211111 111111111100000 00000000000
Q ss_pred cCCCceEeccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCC--EEEEEeccCCccCCCCce
Q 012488 119 SPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQP--YVLYYTEYDGTKGGVGEK 195 (462)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~ 195 (462)
...+....+. ..... ...+..+.++|...+++.++++++++ |++++...+.+.. +.|.+.++. ++.
T Consensus 108 ~~~~~~~~~~---~~~~~--~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~------g~~ 176 (463)
T 3s5w_A 108 HKHDRLVDFI---NLGTF--YPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNAD------GEE 176 (463)
T ss_dssp HHTTCHHHHH---HHCCS--CCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETT------SCE
T ss_pred hhcCceeecc---cccCC--CCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCC------Cce
Confidence 0000000000 00011 35678899999999988899999887 9888742111222 366666651 344
Q ss_pred eEEEecEEEecCCCChH
Q 012488 196 RTLEVDAVIGADGANSR 212 (462)
Q Consensus 196 ~~~~adlvI~AdG~~S~ 212 (462)
.++.+|.||.|+|....
T Consensus 177 ~~~~~d~lVlAtG~~p~ 193 (463)
T 3s5w_A 177 LVRTTRALVVSPGGTPR 193 (463)
T ss_dssp EEEEESEEEECCCCEEC
T ss_pred EEEEeCEEEECCCCCCC
Confidence 48999999999998554
No 103
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.93 E-value=2e-09 Score=111.29 Aligned_cols=68 Identities=13% Similarity=0.015 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHCC-CEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCCChHhhhhh
Q 012488 143 EVLDAYLRERAEKNG-ASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSI 217 (462)
Q Consensus 143 ~~l~~~L~~~~~~~g-v~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S~vr~~l 217 (462)
..+...|.+.+++.| ++++.++ |.++.. +++....|.+.+. .+|+...+.|+.||.|+|.+|.++...
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~--~~g~v~Gv~~~~~-----~~G~~~~i~A~~VVlAtGg~s~~~~~~ 203 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILV--DDGHVRGLVAMNM-----MEGTLVQIRANAVVMATGGAGRVYRYN 203 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEE--ETTEEEEEEEEET-----TTTEEEEEECSCEEECCCCCGGGSSSB
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEE--eCCEEEEEEEEEc-----CCCcEEEEEcCeEEECCCCCcccccCc
Confidence 467888889988888 9999988 888873 2222122333221 113345899999999999999886544
No 104
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.93 E-value=1.7e-09 Score=110.42 Aligned_cols=37 Identities=24% Similarity=0.322 Sum_probs=33.7
Q ss_pred CCCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCC
Q 012488 47 TNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD 84 (462)
Q Consensus 47 ~~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~ 84 (462)
+..++||+|||||++||++|+.|++ |.+|+|+||.+.
T Consensus 5 ~~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~ 41 (540)
T 1chu_A 5 PEHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPV 41 (540)
T ss_dssp CSEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCT
T ss_pred CCCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCC
Confidence 3456899999999999999999999 999999999873
No 105
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.92 E-value=2.7e-09 Score=110.21 Aligned_cols=64 Identities=13% Similarity=0.027 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCCChHh
Q 012488 143 EVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRV 213 (462)
Q Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S~v 213 (462)
..+...|.+.+.+.|++|+.++ |.++.. +++....|.+.+. .+|+...+.|+.||.|+|..+.+
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~--~~g~v~Gv~~~~~-----~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLM--ENGECRGVIALCI-----EDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEE--ETTEEEEEEEEET-----TTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEE--ECCEEEEEEEEEc-----CCCcEEEEEcCeEEECCCccccc
Confidence 4677888889888999999998 888873 2222222444321 12444689999999999999864
No 106
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.91 E-value=4.9e-07 Score=89.66 Aligned_cols=33 Identities=33% Similarity=0.489 Sum_probs=31.7
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+||+|||||++|+++|+.|+++|++|+|+|+++
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~ 34 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGE 34 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCC
Confidence 699999999999999999999999999999965
No 107
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.87 E-value=2.7e-09 Score=110.05 Aligned_cols=64 Identities=17% Similarity=0.125 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCE-EEEEeccCCccCCCCceeEEEecEEEecCCCChHh
Q 012488 143 EVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPY-VLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRV 213 (462)
Q Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S~v 213 (462)
..+...|.+.+++.|++|+.++ |+++.. ++++.+ .|.+.+. .+++...+.|+.||.|+|..+.+
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~--~~~g~v~Gv~~~~~-----~~g~~~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVK--NQDGAVVGCTALCI-----ETGEVVYFKARATVLATGGAGRI 208 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEE--CTTSCEEEEEEEET-----TTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEE--CCCCEEEEEEEEEc-----CCCeEEEEEcCEEEECCCCCccc
Confidence 4677889999999999999998 988873 223333 3444321 12444579999999999998864
No 108
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.85 E-value=1.7e-08 Score=96.48 Aligned_cols=35 Identities=29% Similarity=0.440 Sum_probs=31.9
Q ss_pred CCccEEEECCchHHHHHHHHHHH--CCCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAK--NGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~--~g~~v~v~E~~~ 83 (462)
.++||+|||||||||++|+.|++ .|++|+||||++
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~ 100 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 100 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 46899999999999999999974 599999999986
No 109
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.83 E-value=1.5e-08 Score=95.88 Aligned_cols=115 Identities=23% Similarity=0.286 Sum_probs=77.6
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEE-EcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEec
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFL-IERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDI 127 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v-~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (462)
.++||+||||||||+++|+.|+++|++|+| +||... |+.+... .. .. .+
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~~-----gG~~~~~----~~---------~~------------~~ 52 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMP-----GGQITSS----SE---------IE------------NY 52 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSST-----TGGGGGC----SC---------BC------------CS
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCCC-----Cceeeee----ce---------ec------------cC
Confidence 457999999999999999999999999999 999431 2221100 00 00 00
Q ss_pred cCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcceeEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecC
Q 012488 128 GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGAD 207 (462)
Q Consensus 128 ~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~Ad 207 (462)
.... ..+....+...+.+.+++.|++++.+.|.++ . ....+.+.+++..+ . ++.+|.||.|+
T Consensus 53 ----~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i-~-~~~~~~~~v~~~~~--------~--~~~~d~lvlAt 114 (315)
T 3r9u_A 53 ----PGVA--QVMDGISFMAPWSEQCMRFGLKHEMVGVEQI-L-KNSDGSFTIKLEGG--------K--TELAKAVIVCT 114 (315)
T ss_dssp ----TTCC--SCBCHHHHHHHHHHHHTTTCCEEECCCEEEE-E-ECTTSCEEEEETTS--------C--EEEEEEEEECC
T ss_pred ----CCCC--CCCCHHHHHHHHHHHHHHcCcEEEEEEEEEE-e-cCCCCcEEEEEecC--------C--EEEeCEEEEee
Confidence 0000 0245677888899999999999998887777 3 12123466544332 2 89999999999
Q ss_pred CCCh
Q 012488 208 GANS 211 (462)
Q Consensus 208 G~~S 211 (462)
|...
T Consensus 115 G~~~ 118 (315)
T 3r9u_A 115 GSAP 118 (315)
T ss_dssp CEEE
T ss_pred CCCC
Confidence 9743
No 110
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.83 E-value=1.8e-09 Score=108.48 Aligned_cols=32 Identities=31% Similarity=0.529 Sum_probs=30.7
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
||+|||||++|+++|+.|++.|.+|+|+||..
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~~ 32 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKRI 32 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 79999999999999999999999999999983
No 111
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.81 E-value=3.7e-08 Score=102.49 Aligned_cols=158 Identities=16% Similarity=0.202 Sum_probs=87.6
Q ss_pred CCCccEEEECCchHHHHHHHHHHHC------CCcEEEEcCCCCCCC--Cccc--ccCc-------c-c-----cccCCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKN------GVETFLIERKLDNCK--PCGG--AIPL-------C-M-----VGEFDLP 104 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~------g~~v~v~E~~~~~~~--~~g~--~i~~-------~-~-----l~~~g~~ 104 (462)
..++||||||||+|||++|+.|+++ |.+|+|+||...... ...+ ++.. + . ....|+.
T Consensus 20 ~~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s~s~AqG~~gi~a~l~~ds~e~~~~~~~~~~~gl~ 99 (662)
T 3gyx_A 20 EHSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERSGAVAQGLSAINTYLGDNNADDYVRMVRTDLMGLV 99 (662)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTCSTTTTCEEEECCCCTTSCHHHHHHHHHHHTTTCC
T ss_pred eEEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCCcccccCcchheeecCCCCHHHHHHHHHHhcCCCc
Confidence 3468999999999999999999997 999999999863211 1111 2210 0 0 0111221
Q ss_pred h-hhH----hcc------c--ceEEE--EcCCCceEe------cc-------CcccCCCeEEeeehHHHHHHHHHHHHHC
Q 012488 105 L-DII----DRK------V--TKMKM--ISPSNVAVD------IG-------QTLKPHEYIGMVRREVLDAYLRERAEKN 156 (462)
Q Consensus 105 ~-~~~----~~~------~--~~~~~--~~~~~~~~~------~~-------~~~~~~~~~~~v~r~~l~~~L~~~~~~~ 156 (462)
+ +.+ ... + .++.+ ..+++.... ++ .......+...+....+...|.+.+++.
T Consensus 100 d~~~v~~l~~~a~~~i~~L~~~Gv~f~~~~~~G~~~~g~~~~~fg~~~~~gg~~~~r~~~~~~~~G~~i~~~L~~~a~~~ 179 (662)
T 3gyx_A 100 REDLIYDLGRHVDDSVHLFEEWGLPVWIKDEHGHNLDGAQAKAAGKSLRNGDKPVRSGRWQIMINGESYKVIVAEAAKNA 179 (662)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCCBCEECSSSCEECHHHHHHHTCCTTTTCCBCCSSTTCEEEEETSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCceecCCCCccccchhhhccccccccCccccccceecccCCHHHHHHHHHHHHHhc
Confidence 1 111 000 0 01111 112222110 00 0001111112345567888888888887
Q ss_pred --CCEEEcce-eEEEEecCCCC--CCE-EEEEeccCCccCCCCceeEEEecEEEecCCCChH
Q 012488 157 --GASVINGL-FMKMDLPRNFE--QPY-VLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSR 212 (462)
Q Consensus 157 --gv~i~~~~-v~~~~~~~~~~--~~~-~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S~ 212 (462)
|++++.++ ++++.. +++ +.+ .|...+. .+++...+.|+.||.|+|..+.
T Consensus 180 ~~gV~i~~~~~v~dLi~--~~~~~g~v~Gv~~~~~-----~~g~~~~i~Ak~VVLATGG~g~ 234 (662)
T 3gyx_A 180 LGQDRIIERIFIVKLLL--DKNTPNRIAGAVGFNL-----RANEVHIFKANAMVVACGGAVN 234 (662)
T ss_dssp HCTTTEECSEEECCCEE--CSSSTTBEEEEEEEES-----SSSCEEEEECSEEEECCCCBCS
T ss_pred CCCcEEEEceEEEEEEE--eCCccceEEEEEEEEc-----CCCcEEEEEeCEEEECCCcccc
Confidence 99999988 888774 222 123 2333221 2355578999999999999885
No 112
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.79 E-value=9e-09 Score=104.21 Aligned_cols=148 Identities=15% Similarity=0.168 Sum_probs=87.9
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCC--------------cEEEEcCCCCCCCCcccccC-----ccccccCCCChhhHh
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGV--------------ETFLIERKLDNCKPCGGAIP-----LCMVGEFDLPLDIID 109 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~--------------~v~v~E~~~~~~~~~g~~i~-----~~~l~~~g~~~~~~~ 109 (462)
.-+||||||+||+||++|+.|.+.|. .++.+||.+...-..|-.++ ...++.|--. .
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl----~ 113 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATL----R 113 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTT----T
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccc----c
Confidence 34799999999999999999987543 45667776543222121111 1111111000 0
Q ss_pred cccceEEEE---cCCCceEeccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCC-----CCEEE
Q 012488 110 RKVTKMKMI---SPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFE-----QPYVL 180 (462)
Q Consensus 110 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~-----~~~~v 180 (462)
.....+.|. ...+.-..+. ....+ ...|.++.++|...+++.+..|.+++ |+++.....+. +.++|
T Consensus 114 ~P~s~~sf~~yl~~~~rl~~f~---~~~~~--~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V 188 (501)
T 4b63_A 114 DPRSSFTFLNYLHQKGRLIHFT---NLSTF--LPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTV 188 (501)
T ss_dssp CTTCTTSHHHHHHHHTCHHHHH---TTCCS--CCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEE
T ss_pred CCCCccchHHHHHHhCCccCCc---cccCC--CCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEE
Confidence 000000000 0001001110 11112 47899999999999999888899888 99987533221 24788
Q ss_pred EEeccCCccCCCCceeEEEecEEEecCCCC
Q 012488 181 YYTEYDGTKGGVGEKRTLEVDAVIGADGAN 210 (462)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~adlvI~AdG~~ 210 (462)
+..++ .+++..++.|+.||.|+|..
T Consensus 189 ~~~~~-----~~g~~~~~~ar~vVlatG~~ 213 (501)
T 4b63_A 189 RSRNV-----ETGEISARRTRKVVIAIGGT 213 (501)
T ss_dssp EEEET-----TTCCEEEEEEEEEEECCCCE
T ss_pred EEecC-----CCceEEEEEeCEEEECcCCC
Confidence 88876 35777899999999999954
No 113
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.78 E-value=1.8e-08 Score=105.01 Aligned_cols=157 Identities=17% Similarity=0.218 Sum_probs=83.8
Q ss_pred CCccEEEECCchHHHHHHHHHH---H-CCCcEEEEcCCCCCC-CCc-ccccCcc-cc---ccC-----------------
Q 012488 49 RNLRVAVIGGGPAGGAAAETLA---K-NGVETFLIERKLDNC-KPC-GGAIPLC-MV---GEF----------------- 101 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~---~-~g~~v~v~E~~~~~~-~~~-g~~i~~~-~l---~~~----------------- 101 (462)
.++||||||||+|||++|+.|+ + +|.+|+|+||..... ... ++..... .+ .+.
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~g 100 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTLDM 100 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHHHT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCCCCcceecccccccchhhHHHhcCCCCCHHHHHHHHHHHh
Confidence 4589999999999999999999 6 899999999987321 111 1111000 01 000
Q ss_pred -CCC-hhhHh----cccceEEEEcCCCceEec---cCcccCCCeEEeeehHHHHHHHHHHHHHC-CC-EEEcce-eEEEE
Q 012488 102 -DLP-LDIID----RKVTKMKMISPSNVAVDI---GQTLKPHEYIGMVRREVLDAYLRERAEKN-GA-SVINGL-FMKMD 169 (462)
Q Consensus 102 -g~~-~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~r~~l~~~L~~~~~~~-gv-~i~~~~-v~~~~ 169 (462)
++. ++++. .....+.+....|..+.. +.......+...+....+...|.+.+++. |+ +++.++ |+++.
T Consensus 101 ~~l~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~~~~~~g~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~ 180 (643)
T 1jnr_A 101 MGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAAKMAVGEENIYERVFIFELL 180 (643)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCBCBSSSSCEEEEETTHHHHHHHHHHHHHCGGGEECSEEEEEEE
T ss_pred cCcCcHHHHHHHHHHHHHHHHHHHHcCCcceeCCCCCccCCCccccCCCcHHHHHHHHHHHHhcCCCcEEEecCEEEEEE
Confidence 110 11100 000000000001111100 00001111111234456778888888887 99 999988 88887
Q ss_pred ecCCCC--CCE-EEEEeccCCccCCCCceeEEEecEEEecCCCChH
Q 012488 170 LPRNFE--QPY-VLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSR 212 (462)
Q Consensus 170 ~~~~~~--~~~-~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S~ 212 (462)
. +++ +.+ .|...+- .+++...+.|+.||.|+|..+.
T Consensus 181 ~--~~~~~g~v~Gv~~~~~-----~~g~~~~i~A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 181 K--DNNDPNAVAGAVGFSV-----REPKFYVFKAKAVILATGGATL 219 (643)
T ss_dssp E--CTTCTTBEEEEEEEES-----SSSCEEEEECSEEEECCCCBCS
T ss_pred E--cCCccceeEEEEEEEe-----cCCcEEEEEcCEEEECCCcccc
Confidence 4 222 133 2332221 1244457999999999999886
No 114
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.77 E-value=6.3e-09 Score=108.28 Aligned_cols=36 Identities=31% Similarity=0.348 Sum_probs=33.7
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..++||||||||++||++|+.|++.|.+|+|+||.+
T Consensus 3 ~~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~ 38 (660)
T 2bs2_A 3 VQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIP 38 (660)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred cccccEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 446899999999999999999999999999999987
No 115
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.76 E-value=1.2e-09 Score=109.86 Aligned_cols=143 Identities=24% Similarity=0.263 Sum_probs=77.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCc--ccccCcc-ccccCCCChhhH-hcccceEEEEcCCCceE
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPC--GGAIPLC-MVGEFDLPLDII-DRKVTKMKMISPSNVAV 125 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~--g~~i~~~-~l~~~g~~~~~~-~~~~~~~~~~~~~~~~~ 125 (462)
++||+||||||+|+++|+.|++.|++|+|+|++. ..-.| .++++.. .+...++.+.+. .....++. ....+
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~-~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~----~~~~~ 77 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY-WGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGIS----GEVTF 77 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEE----ECCEE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCC----CCCcc
Confidence 4799999999999999999999999999999973 11000 0112211 111111111111 00001111 00111
Q ss_pred eccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcceeEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEe
Q 012488 126 DIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIG 205 (462)
Q Consensus 126 ~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~ 205 (462)
++......... + ...+.+.+.+.+++.|++++.++...+ +...+.|...+| +..++++|.||.
T Consensus 78 ~~~~~~~~~~~--~--~~~l~~~l~~~~~~~gv~~~~g~~~~i-----d~~~v~V~~~~G--------~~~~~~~d~lVi 140 (464)
T 2a8x_A 78 DYGIAYDRSRK--V--AEGRVAGVHFLMKKNKITEIHGYGTFA-----DANTLLVDLNDG--------GTESVTFDNAII 140 (464)
T ss_dssp CHHHHHHHHHH--H--HHHHHHHHHHHHHHTTCEEECEEEEES-----SSSEEEEEETTS--------CCEEEEEEEEEE
T ss_pred CHHHHHHHHHH--H--HHHHHHHHHHHHHhCCCEEEEeEEEEe-----cCCeEEEEeCCC--------ceEEEEcCEEEE
Confidence 11100000000 0 123555567777788999999874322 223456655433 225799999999
Q ss_pred cCCCChHhh
Q 012488 206 ADGANSRVA 214 (462)
Q Consensus 206 AdG~~S~vr 214 (462)
|+|.++...
T Consensus 141 AtG~~~~~~ 149 (464)
T 2a8x_A 141 ATGSSTRLV 149 (464)
T ss_dssp CCCEEECCC
T ss_pred CCCCCCCCC
Confidence 999887543
No 116
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.70 E-value=4.7e-09 Score=106.03 Aligned_cols=38 Identities=24% Similarity=0.281 Sum_probs=33.3
Q ss_pred CCCCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 46 ~~~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
|...++||+||||||+|+++|+.|+++|++|+|||+..
T Consensus 22 M~~~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 59 (484)
T 3o0h_A 22 MGSFDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEYR 59 (484)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCcCCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCCC
Confidence 44457999999999999999999999999999999943
No 117
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.70 E-value=1.7e-09 Score=108.76 Aligned_cols=34 Identities=35% Similarity=0.385 Sum_probs=32.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
++||+||||||+|+++|+.|++.|++|+||||++
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~ 37 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKG 37 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTS
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 5899999999999999999999999999999765
No 118
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.69 E-value=6.2e-08 Score=96.20 Aligned_cols=111 Identities=19% Similarity=0.197 Sum_probs=69.7
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCC--cEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEe
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGV--ETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVD 126 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~--~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 126 (462)
+.+||+|||||++|+++|..|++.|+ +|+|+|+.+... ...+ . +...+.. +..
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~----~~~~--~-----l~~~~~~------------~~~-- 57 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIP----HHLP--P-----LSKAYLA------------GKA-- 57 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCC----BCSG--G-----GGTTTTT------------TCS--
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCC----CcCC--C-----CcHHHhC------------CCC--
Confidence 46799999999999999999999998 799999876211 0000 0 0000000 000
Q ss_pred ccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEe
Q 012488 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIG 205 (462)
Q Consensus 127 ~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~ 205 (462)
.... +...+.+.+++.|++++.++ |..+.. ++ ..|.+.++ .++.+|.||.
T Consensus 58 -----~~~~---------~~~~~~~~~~~~gv~~~~~~~v~~i~~---~~--~~v~~~~g----------~~~~~d~lvi 108 (431)
T 1q1r_A 58 -----TAES---------LYLRTPDAYAAQNIQLLGGTQVTAINR---DR--QQVILSDG----------RALDYDRLVL 108 (431)
T ss_dssp -----CSGG---------GBSSCHHHHHHTTEEEECSCCEEEEET---TT--TEEEETTS----------CEEECSEEEE
T ss_pred -----ChHH---------hcccCHHHHHhCCCEEEeCCEEEEEEC---CC--CEEEECCC----------CEEECCEEEE
Confidence 0000 00001233456799999987 888872 22 24666665 6899999999
Q ss_pred cCCCChHh
Q 012488 206 ADGANSRV 213 (462)
Q Consensus 206 AdG~~S~v 213 (462)
|+|..+..
T Consensus 109 AtG~~p~~ 116 (431)
T 1q1r_A 109 ATGGRPRP 116 (431)
T ss_dssp CCCEEECC
T ss_pred cCCCCccC
Confidence 99986643
No 119
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.68 E-value=4.8e-09 Score=105.84 Aligned_cols=35 Identities=37% Similarity=0.598 Sum_probs=32.8
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+++||+||||||+|+++|+.|++.|++|+|||+++
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~ 39 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYK 39 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 35899999999999999999999999999999965
No 120
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.67 E-value=1.1e-08 Score=101.85 Aligned_cols=108 Identities=19% Similarity=0.125 Sum_probs=71.0
Q ss_pred ccEEEECCchHHHHHHHHHHH---CCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEec
Q 012488 51 LRVAVIGGGPAGGAAAETLAK---NGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDI 127 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~---~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (462)
.||+|||||++|+++|..|++ .|++|+|||+++.... .+ ....+.. +.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~------~~-------~~~~~~~------------g~---- 55 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQF------VP-------SNPWVGV------------GW---- 55 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEEC------GG-------GHHHHHH------------TS----
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcc------cC-------Ccccccc------------Cc----
Confidence 599999999999999999999 8999999999862100 00 0000000 00
Q ss_pred cCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcceeEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecC
Q 012488 128 GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGAD 207 (462)
Q Consensus 128 ~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~Ad 207 (462)
.....+...+.+.+++.|++++.+.|+.++. ++ ..|++.++ .++.+|.||.|+
T Consensus 56 ------------~~~~~~~~~l~~~~~~~gv~~~~~~v~~id~---~~--~~V~~~~g----------~~i~~d~lviAt 108 (437)
T 3sx6_A 56 ------------KERDDIAFPIRHYVERKGIHFIAQSAEQIDA---EA--QNITLADG----------NTVHYDYLMIAT 108 (437)
T ss_dssp ------------SCHHHHEEECHHHHHTTTCEEECSCEEEEET---TT--TEEEETTS----------CEEECSEEEECC
T ss_pred ------------cCHHHHHHHHHHHHHHCCCEEEEeEEEEEEc---CC--CEEEECCC----------CEEECCEEEECC
Confidence 0111122223445556799999877888872 22 25666665 689999999999
Q ss_pred CCChHhh
Q 012488 208 GANSRVA 214 (462)
Q Consensus 208 G~~S~vr 214 (462)
|..+..-
T Consensus 109 G~~~~~~ 115 (437)
T 3sx6_A 109 GPKLAFE 115 (437)
T ss_dssp CCEECGG
T ss_pred CCCcCcc
Confidence 9866543
No 121
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.66 E-value=1.5e-06 Score=91.93 Aligned_cols=35 Identities=43% Similarity=0.588 Sum_probs=32.8
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..+||+|||||++|+++|..|++.|++|+|+|+.+
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~ 369 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKD 369 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeccc
Confidence 35799999999999999999999999999999976
No 122
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.66 E-value=6.1e-09 Score=104.31 Aligned_cols=137 Identities=19% Similarity=0.212 Sum_probs=74.7
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCc--ccccCcccc-ccCCCChhhHhcccceEEEEcCCCceEe
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPC--GGAIPLCMV-GEFDLPLDIIDRKVTKMKMISPSNVAVD 126 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~--g~~i~~~~l-~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 126 (462)
++||+||||||+|+++|..|++.|++|+|+|+.. ..-.| .++++...+ ........+......++.+ .....+
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~-~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~---~~~~~~ 78 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGN-LGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKA---ENVTID 78 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEEC---CSCEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC-CCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCccc---CCCccC
Confidence 5799999999999999999999999999999973 11000 011221111 0000000000000001110 000111
Q ss_pred ccCcccCCCeEEeeeh-----HHHHHHHHHHHHHCCCEEEcceeEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEec
Q 012488 127 IGQTLKPHEYIGMVRR-----EVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVD 201 (462)
Q Consensus 127 ~~~~~~~~~~~~~v~r-----~~l~~~L~~~~~~~gv~i~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ad 201 (462)
+.. ++.+ ..+.+.+.+.+++.|++++.+++..+. .+.+.|...+| ..++++|
T Consensus 79 ~~~---------~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id-----~~~v~V~~~~G---------~~~i~~d 135 (455)
T 1ebd_A 79 FAK---------VQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVD-----ANTVRVVNGDS---------AQTYTFK 135 (455)
T ss_dssp HHH---------HHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEE-----TTEEEEEETTE---------EEEEECS
T ss_pred HHH---------HHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEcc-----CCeEEEEeCCC---------cEEEEeC
Confidence 100 1111 124445566777789999999844443 23356655443 1579999
Q ss_pred EEEecCCCChHh
Q 012488 202 AVIGADGANSRV 213 (462)
Q Consensus 202 lvI~AdG~~S~v 213 (462)
.||.|+|..+..
T Consensus 136 ~lViATGs~p~~ 147 (455)
T 1ebd_A 136 NAIIATGSRPIE 147 (455)
T ss_dssp EEEECCCEEECC
T ss_pred EEEEecCCCCCC
Confidence 999999976643
No 123
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.66 E-value=3.8e-09 Score=106.29 Aligned_cols=148 Identities=22% Similarity=0.258 Sum_probs=77.1
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCc--ccccCcccc-ccCCCChhhHh-cccceEEEEcCCCce
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPC--GGAIPLCMV-GEFDLPLDIID-RKVTKMKMISPSNVA 124 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~--g~~i~~~~l-~~~g~~~~~~~-~~~~~~~~~~~~~~~ 124 (462)
.++||+||||||+|+++|+.|++.|++|+|||+++...-.| .++++...+ ....+...+.. ....++.. ....
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~---~~~~ 81 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKV---SNVE 81 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEE---SCEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCccc---CCCc
Confidence 35899999999999999999999999999999986321111 011221111 00000001100 00001110 0011
Q ss_pred EeccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcceeEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEE
Q 012488 125 VDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVI 204 (462)
Q Consensus 125 ~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI 204 (462)
.++........ --...+...+.+.+++.|++++.++...+. ...+.|...+ |+..++++|.||
T Consensus 82 ~~~~~~~~~~~----~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~-----~~~~~v~~~~--------G~~~~i~~d~lI 144 (470)
T 1dxl_A 82 IDLAAMMGQKD----KAVSNLTRGIEGLFKKNKVTYVKGYGKFVS-----PSEISVDTIE--------GENTVVKGKHII 144 (470)
T ss_dssp ECHHHHHHHHH----HHHHHHHHHHHHHHHHHTCEEEESCEEEEE-----TTEEEECCSS--------SCCEEEECSEEE
T ss_pred cCHHHHHHHHH----HHHHHHHHHHHHHHHhCCCEEEEeEEEEec-----CCEEEEEeCC--------CceEEEEcCEEE
Confidence 11100000000 001224444566667779999998844343 2235554333 222579999999
Q ss_pred ecCCCChHhhhh
Q 012488 205 GADGANSRVAKS 216 (462)
Q Consensus 205 ~AdG~~S~vr~~ 216 (462)
.|+|.++.+-..
T Consensus 145 iAtGs~p~~p~~ 156 (470)
T 1dxl_A 145 IATGSDVKSLPG 156 (470)
T ss_dssp ECCCEEECCBTT
T ss_pred ECCCCCCCCCCC
Confidence 999987765443
No 124
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.65 E-value=5.9e-09 Score=104.66 Aligned_cols=36 Identities=25% Similarity=0.327 Sum_probs=32.9
Q ss_pred CCCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCC
Q 012488 47 TNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK 82 (462)
Q Consensus 47 ~~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~ 82 (462)
..+++||+||||||+|+++|+.|+++|++|+|||+.
T Consensus 2 ~~~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~ 37 (463)
T 4dna_A 2 SAFDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF 37 (463)
T ss_dssp -CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 345789999999999999999999999999999994
No 125
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.65 E-value=6.9e-09 Score=105.00 Aligned_cols=35 Identities=29% Similarity=0.471 Sum_probs=31.9
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+++||+||||||+|+++|+.|++.|++|+|||+++
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 58 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRS 58 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 46899999999999999999999999999999875
No 126
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.64 E-value=7e-09 Score=104.58 Aligned_cols=34 Identities=41% Similarity=0.566 Sum_probs=32.3
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
++||+||||||+|+++|+.|++.|++|+|||+++
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 38 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRG 38 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 5899999999999999999999999999999965
No 127
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.64 E-value=4.6e-09 Score=105.80 Aligned_cols=36 Identities=39% Similarity=0.486 Sum_probs=33.6
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
++++||+||||||+|+++|..|++.|++|+|||+++
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 39 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNE 39 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 356899999999999999999999999999999985
No 128
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.63 E-value=3.9e-08 Score=97.02 Aligned_cols=110 Identities=29% Similarity=0.307 Sum_probs=69.4
Q ss_pred ccEEEECCchHHHHHHHHHHH---CCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEec
Q 012488 51 LRVAVIGGGPAGGAAAETLAK---NGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDI 127 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~---~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (462)
.||+|||||++|+++|..|++ .|++|+|||+++.. +. .+ .+. ....
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~----~~--~~------~~~-------------------~~~~ 50 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFS----YF--RP------ALP-------------------HVAI 50 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEE----EE--CC------SSC-------------------CCCS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCc----ee--cc------chh-------------------hccc
Confidence 389999999999999999999 89999999998621 00 00 000 0000
Q ss_pred cCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcceeEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecC
Q 012488 128 GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGAD 207 (462)
Q Consensus 128 ~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~Ad 207 (462)
+ ....... ...+.+.+++.|++++.+.|+.++. ++. .|++.++. ++..++.+|.||.|+
T Consensus 51 ~-~~~~~~~---------~~~~~~~~~~~gv~~~~~~v~~i~~---~~~--~V~~~~g~------~~~~~~~~d~lViAt 109 (409)
T 3h8l_A 51 G-VRDVDEL---------KVDLSEALPEKGIQFQEGTVEKIDA---KSS--MVYYTKPD------GSMAEEEYDYVIVGI 109 (409)
T ss_dssp S-CCCCCCE---------EEEHHHHTGGGTCEEEECEEEEEET---TTT--EEEEECTT------SCEEEEECSEEEECC
T ss_pred C-CcCHHHH---------HHHHHHHHhhCCeEEEEeeEEEEeC---CCC--EEEEccCC------cccceeeCCEEEECC
Confidence 0 0011111 1113334446689999888888872 222 45566652 334569999999999
Q ss_pred CCChH
Q 012488 208 GANSR 212 (462)
Q Consensus 208 G~~S~ 212 (462)
|....
T Consensus 110 G~~~~ 114 (409)
T 3h8l_A 110 GAHLA 114 (409)
T ss_dssp CCEEC
T ss_pred CCCcC
Confidence 98554
No 129
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.62 E-value=3.4e-08 Score=100.45 Aligned_cols=35 Identities=29% Similarity=0.472 Sum_probs=33.0
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.++||+||||||+|+++|+.|++.|++|+|||+++
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 46899999999999999999999999999999965
No 130
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.59 E-value=4.8e-08 Score=98.56 Aligned_cols=36 Identities=31% Similarity=0.399 Sum_probs=32.9
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.+++||+||||||+|+++|+.|++.|++|+||||..
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 42 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVK 42 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 357999999999999999999999999999999643
No 131
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.59 E-value=4.8e-08 Score=98.45 Aligned_cols=35 Identities=40% Similarity=0.602 Sum_probs=32.8
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.++||+||||||+|+++|+.|++.|++|+|||++.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 35899999999999999999999999999999974
No 132
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.58 E-value=9.2e-08 Score=95.61 Aligned_cols=33 Identities=33% Similarity=0.438 Sum_probs=31.6
Q ss_pred ccEEEECCchHHHHHHHHHHHC--CCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKN--GVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~--g~~v~v~E~~~ 83 (462)
+||+|||||+||+++|..|++. |++|+|||+++
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~ 37 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQA 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 5999999999999999999998 99999999987
No 133
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.57 E-value=3.5e-08 Score=99.72 Aligned_cols=36 Identities=28% Similarity=0.399 Sum_probs=33.3
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.+++||+||||||||+++|+.|++.|++|+|+||.+
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 457999999999999999999999999999999854
No 134
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.57 E-value=8e-08 Score=94.95 Aligned_cols=109 Identities=19% Similarity=0.231 Sum_probs=68.7
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCc--EEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceE
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVE--TFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAV 125 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~--v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 125 (462)
.+++||+|||||++|+++|..|+++|++ |+|+|+.+..... .+ . +...+. .+.
T Consensus 7 ~~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~----~~--~-----l~~~~~------------~~~-- 61 (415)
T 3lxd_A 7 AERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYE----RP--P-----LSKEYL------------ARE-- 61 (415)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBC----SG--G-----GGTTTT------------TTS--
T ss_pred CCCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcC----cc--c-----CCHHHH------------cCC--
Confidence 3468999999999999999999999987 9999998732100 00 0 000000 000
Q ss_pred eccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEE
Q 012488 126 DIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVI 204 (462)
Q Consensus 126 ~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI 204 (462)
..... +.....+..++.|++++.++ +..+.. . ...|.+.++ .++.+|.||
T Consensus 62 -----~~~~~---------~~~~~~~~~~~~~i~~~~~~~v~~id~---~--~~~v~~~~g----------~~~~~d~lv 112 (415)
T 3lxd_A 62 -----KTFER---------ICIRPAQFWEDKAVEMKLGAEVVSLDP---A--AHTVKLGDG----------SAIEYGKLI 112 (415)
T ss_dssp -----SCSGG---------GBSSCHHHHHHTTEEEEETCCEEEEET---T--TTEEEETTS----------CEEEEEEEE
T ss_pred -----CCHHH---------hccCCHHHHHHCCcEEEeCCEEEEEEC---C--CCEEEECCC----------CEEEeeEEE
Confidence 00000 00011233446789999985 888872 2 235666666 689999999
Q ss_pred ecCCCC
Q 012488 205 GADGAN 210 (462)
Q Consensus 205 ~AdG~~ 210 (462)
.|+|..
T Consensus 113 lAtG~~ 118 (415)
T 3lxd_A 113 WATGGD 118 (415)
T ss_dssp ECCCEE
T ss_pred EccCCc
Confidence 999954
No 135
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.57 E-value=1.8e-08 Score=101.21 Aligned_cols=34 Identities=32% Similarity=0.440 Sum_probs=32.5
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
++||+||||||||+++|..|++.|++|+|||+++
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 5899999999999999999999999999999975
No 136
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.56 E-value=4.6e-08 Score=98.54 Aligned_cols=35 Identities=31% Similarity=0.436 Sum_probs=32.6
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+++||+||||||+|+++|+.|++.|++|+|+|++.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~ 53 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESHK 53 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 46899999999999999999999999999999764
No 137
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.56 E-value=1.2e-08 Score=102.90 Aligned_cols=35 Identities=43% Similarity=0.566 Sum_probs=33.3
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+++||+||||||+|+++|+.|++.|++|+|||+++
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 36 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYK 36 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 46899999999999999999999999999999986
No 138
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.54 E-value=1.7e-08 Score=101.51 Aligned_cols=35 Identities=37% Similarity=0.544 Sum_probs=32.9
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+++||+||||||+|+++|+.|++.|++|+|||+++
T Consensus 1 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 35 (468)
T 2qae_A 1 NPYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRG 35 (468)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 35899999999999999999999999999999985
No 139
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.53 E-value=6.5e-08 Score=97.97 Aligned_cols=35 Identities=34% Similarity=0.489 Sum_probs=32.5
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
|++||+||||||+|+++|..|++.|++|+|||+++
T Consensus 1 m~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 1 MVYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 46899999999999999999999999999999974
No 140
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.53 E-value=2.4e-08 Score=101.45 Aligned_cols=145 Identities=20% Similarity=0.238 Sum_probs=77.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCC----CCccc------ccCccccccCCCChhhHhccc--ceEEE
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNC----KPCGG------AIPLCMVGEFDLPLDIIDRKV--TKMKM 117 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~----~~~g~------~i~~~~l~~~g~~~~~~~~~~--~~~~~ 117 (462)
+|||+||||||+|+.+|+.+++.|.+|+|+|+..+.. ...|+ |+|.+.|..-.-......... .++.+
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 5999999999999999999999999999999876321 11232 344333311100000011001 11111
Q ss_pred EcCCCceEeccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcceeEEEEecCCCCCCEEEEEeccCCccCCCCceeE
Q 012488 118 ISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRT 197 (462)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 197 (462)
. ...+++......... .+ ..+........+..|++++.+...-+. ...+.|...+. .+...+
T Consensus 122 ~---~~~~d~~~~~~~~~~--~v--~~l~~~~~~~l~~~~V~~i~G~a~f~~-----~~~v~V~~~~~------~~~~~~ 183 (542)
T 4b1b_A 122 D---NLKHDWKKLVTTVQS--HI--RSLNFSYMTGLRSSKVKYINGLAKLKD-----KNTVSYYLKGD------LSKEET 183 (542)
T ss_dssp E---EEEECHHHHHHHHHH--HH--HHHHHHHHHHHHHTTCEEECEEEEEEE-----TTEEEEEEC--------CCCEEE
T ss_pred C---cccccHHHHHHHHHH--HH--HHHHHHHHHHHHhCCCEEEeeeEEEcC-----CCcceEeeccc------CCceEE
Confidence 1 111222110000000 00 123333445567789999988743332 22355544432 234578
Q ss_pred EEecEEEecCCCChH
Q 012488 198 LEVDAVIGADGANSR 212 (462)
Q Consensus 198 ~~adlvI~AdG~~S~ 212 (462)
++++.+|.|+|.+..
T Consensus 184 i~a~~iiIATGs~P~ 198 (542)
T 4b1b_A 184 VTGKYILIATGCRPH 198 (542)
T ss_dssp EEEEEEEECCCEEEC
T ss_pred EeeeeEEeccCCCCC
Confidence 999999999997654
No 141
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.52 E-value=3.3e-07 Score=92.52 Aligned_cols=35 Identities=23% Similarity=0.357 Sum_probs=32.7
Q ss_pred CCccEEEECCchHHHHHHHHHHHCC---CcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNG---VETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g---~~v~v~E~~~ 83 (462)
|++||+|||||++|+++|..|++.| .+|+|||+++
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~ 71 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNS 71 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCC
Confidence 3589999999999999999999988 9999999986
No 142
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.52 E-value=6.7e-08 Score=94.38 Aligned_cols=108 Identities=19% Similarity=0.196 Sum_probs=69.1
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEecc
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (462)
.+.+|+|||||+||+++|..|++.+.+|+|||+.+... +. +..++. .+.. . ...
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~------y~-----~~~l~~-~l~g------------~-~~~- 61 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLP------YY-----RPRLNE-IIAK------------N-KSI- 61 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCC------BC-----GGGHHH-HHHS------------C-CCG-
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCC------cc-----cChhhH-HHcC------------C-CCH-
Confidence 35689999999999999999988899999999987321 00 000111 1100 0 000
Q ss_pred CcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecC
Q 012488 129 QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGAD 207 (462)
Q Consensus 129 ~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~Ad 207 (462)
.. +...+.+..++.|++++.++ |++++. ++ ..|++.+| .++.+|.||.|+
T Consensus 62 -----~~---------l~~~~~~~~~~~~i~~~~~~~V~~id~---~~--~~v~~~~g----------~~~~yd~lvlAt 112 (385)
T 3klj_A 62 -----DD---------ILIKKNDWYEKNNIKVITSEFATSIDP---NN--KLVTLKSG----------EKIKYEKLIIAS 112 (385)
T ss_dssp -----GG---------TBSSCHHHHHHTTCEEECSCCEEEEET---TT--TEEEETTS----------CEEECSEEEECC
T ss_pred -----HH---------ccCCCHHHHHHCCCEEEeCCEEEEEEC---CC--CEEEECCC----------CEEECCEEEEec
Confidence 00 00011223346799999886 998872 22 25666666 789999999999
Q ss_pred CCCh
Q 012488 208 GANS 211 (462)
Q Consensus 208 G~~S 211 (462)
|...
T Consensus 113 G~~p 116 (385)
T 3klj_A 113 GSIA 116 (385)
T ss_dssp CEEE
T ss_pred CCCc
Confidence 9643
No 143
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.52 E-value=1.7e-08 Score=100.27 Aligned_cols=34 Identities=35% Similarity=0.440 Sum_probs=31.9
Q ss_pred CccEEEECCchHHHHHHHHHHH--CCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAK--NGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~--~g~~v~v~E~~~ 83 (462)
..||+|||||++|+++|..|++ .|++|+|||+++
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~ 37 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCC
Confidence 4599999999999999999999 899999999986
No 144
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.50 E-value=2.7e-07 Score=95.46 Aligned_cols=114 Identities=19% Similarity=0.251 Sum_probs=69.9
Q ss_pred CccEEEECCchHHHHHHHHHHHC--CCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEec
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKN--GVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDI 127 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~--g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (462)
.+||+|||||+||+++|..|++. |++|+|||+++... +. ..+++..+ .+.
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~------~~-----~~~lp~~~-------------~g~---- 87 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS------FA-----NCGLPYYI-------------GGV---- 87 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS------BC-----GGGHHHHH-------------TTS----
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc------cc-----CCCCchhh-------------cCc----
Confidence 46999999999999999999998 89999999987321 10 00111000 000
Q ss_pred cCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEec
Q 012488 128 GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGA 206 (462)
Q Consensus 128 ~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~A 206 (462)
... ....+...+...+++.|++++.+. |.++.. +...+.+...+. ++...+.+|.||.|
T Consensus 88 ---~~~-------~~~~~~~~~~~~~~~~gi~v~~~~~V~~id~---~~~~v~v~~~~~-------g~~~~~~~d~lviA 147 (588)
T 3ics_A 88 ---ITE-------RQKLLVQTVERMSKRFNLDIRVLSEVVKINK---EEKTITIKNVTT-------NETYNEAYDVLILS 147 (588)
T ss_dssp ---SCC-------GGGGBSSCHHHHHHHTTCEEECSEEEEEEET---TTTEEEEEETTT-------CCEEEEECSEEEEC
T ss_pred ---CCC-------hHHhhccCHHHHHHhcCcEEEECCEEEEEEC---CCCEEEEeecCC-------CCEEEEeCCEEEEC
Confidence 000 001122234445567799998877 888872 233343332111 33358899999999
Q ss_pred CCCCh
Q 012488 207 DGANS 211 (462)
Q Consensus 207 dG~~S 211 (462)
+|...
T Consensus 148 tG~~p 152 (588)
T 3ics_A 148 PGAKP 152 (588)
T ss_dssp CCEEE
T ss_pred CCCCC
Confidence 99644
No 145
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.50 E-value=1.4e-07 Score=95.60 Aligned_cols=35 Identities=31% Similarity=0.439 Sum_probs=32.4
Q ss_pred CCccEEEECCchHHHHHHHHHHHC---CCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKN---GVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~---g~~v~v~E~~~ 83 (462)
|++||+|||||++|+++|+.|++. |++|+|||+++
T Consensus 1 M~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 1 MVTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 358999999999999999999999 99999999975
No 146
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.49 E-value=2.8e-08 Score=99.25 Aligned_cols=35 Identities=34% Similarity=0.433 Sum_probs=32.8
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.++||+||||||+|+++|..|++.|++|+|||++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE 37 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 36899999999999999999999999999999974
No 147
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.49 E-value=2.7e-08 Score=99.61 Aligned_cols=34 Identities=32% Similarity=0.453 Sum_probs=32.2
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
++||+||||||+|+++|+.|++.|++|+|||+++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 34 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEK 34 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCC
Confidence 3799999999999999999999999999999985
No 148
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.46 E-value=3.2e-07 Score=91.60 Aligned_cols=34 Identities=29% Similarity=0.392 Sum_probs=31.7
Q ss_pred CccEEEECCchHHHHHHHHHHHC--CCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKN--GVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~--g~~v~v~E~~~ 83 (462)
++||+|||||++|+++|..|++. |++|+|||+.+
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~ 38 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATE 38 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 36999999999999999999998 88999999986
No 149
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.45 E-value=6.1e-07 Score=93.00 Aligned_cols=36 Identities=22% Similarity=0.348 Sum_probs=33.3
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD 84 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~ 84 (462)
.++||+|||||++|+++|+.|+++|++|+|+|+.+.
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~ 80 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEI 80 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCC
Confidence 468999999999999999999999999999999873
No 150
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.44 E-value=5.5e-07 Score=90.51 Aligned_cols=35 Identities=23% Similarity=0.216 Sum_probs=30.9
Q ss_pred CccEEEECCchHHHHHHHHHHHC--CCcEEEEcCCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKN--GVETFLIERKLD 84 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~--g~~v~v~E~~~~ 84 (462)
++||+|||||++|+++|..|++. |++|+|||+++.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCc
Confidence 35999999999999999999998 999999999873
No 151
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.44 E-value=7.3e-07 Score=87.84 Aligned_cols=107 Identities=21% Similarity=0.267 Sum_probs=67.3
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCc--EEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEec
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVE--TFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDI 127 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~--v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (462)
..+|+|||||+||+++|..|+++|++ |+|+|+.+... .. ...+...+.....
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~----y~-------~~~l~~~~~~g~~--------------- 55 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLP----YD-------RPSLSKAVLDGSL--------------- 55 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSS----BC-------SGGGGTHHHHTSS---------------
T ss_pred CCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCC----cC-------CccccHHHhCCCC---------------
Confidence 34899999999999999999999988 99999987321 00 0001111111000
Q ss_pred cCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEec
Q 012488 128 GQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGA 206 (462)
Q Consensus 128 ~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~A 206 (462)
.... +.. . .+..++.|++++.++ |..+.. . ...|.+.++ .++.+|.||.|
T Consensus 56 ----~~~~---~~~---~----~~~~~~~~i~~~~~~~v~~id~---~--~~~v~~~~g----------~~~~~d~lvlA 106 (410)
T 3ef6_A 56 ----ERPP---ILA---E----ADWYGEARIDMLTGPEVTALDV---Q--TRTISLDDG----------TTLSADAIVIA 106 (410)
T ss_dssp ----SSCC---BSS---C----TTHHHHTTCEEEESCCEEEEET---T--TTEEEETTS----------CEEECSEEEEC
T ss_pred ----CHHH---hcC---C----HHHHHHCCCEEEeCCEEEEEEC---C--CCEEEECCC----------CEEECCEEEEc
Confidence 0000 000 0 112235689999995 888872 1 235666666 68999999999
Q ss_pred CCCCh
Q 012488 207 DGANS 211 (462)
Q Consensus 207 dG~~S 211 (462)
+|...
T Consensus 107 tG~~p 111 (410)
T 3ef6_A 107 TGSRA 111 (410)
T ss_dssp CCEEE
T ss_pred cCCcc
Confidence 99653
No 152
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.44 E-value=1e-07 Score=95.56 Aligned_cols=35 Identities=40% Similarity=0.526 Sum_probs=32.8
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.++||+||||||+|+++|..|++.|++|+|||++.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA 37 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 46899999999999999999999999999999974
No 153
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.44 E-value=7.4e-07 Score=89.74 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=31.5
Q ss_pred ccEEEECCchHHHHHHHHHHHC--CCcEEEEcCCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKN--GVETFLIERKLD 84 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~--g~~v~v~E~~~~ 84 (462)
+||+|||||++|+++|..|++. |.+|+|||+.+.
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~ 72 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEI 72 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSC
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 5999999999999999999986 999999999863
No 154
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.43 E-value=2.9e-07 Score=92.01 Aligned_cols=33 Identities=21% Similarity=0.239 Sum_probs=31.4
Q ss_pred ccEEEECCchHHHHHHHHHHHC--CCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKN--GVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~--g~~v~v~E~~~ 83 (462)
+||+|||||++|+++|..|++. |.+|+|+|+++
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMND 35 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 5899999999999999999998 99999999986
No 155
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.42 E-value=3.5e-07 Score=91.27 Aligned_cols=33 Identities=27% Similarity=0.312 Sum_probs=31.1
Q ss_pred ccEEEECCchHHHHHHHHHHHC--CCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKN--GVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~--g~~v~v~E~~~ 83 (462)
+||+|||||++|+++|..|++. |.+|+|||+++
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCC
Confidence 4899999999999999999997 99999999986
No 156
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.41 E-value=8.3e-08 Score=95.29 Aligned_cols=104 Identities=21% Similarity=0.161 Sum_probs=65.2
Q ss_pred ccEEEECCchHHHHHHHHHHHCC--CcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEecc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNG--VETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g--~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (462)
.+|||||||+||+++|..|++.+ ++|+|||+++... +.+ . + ..+..... ++....
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~------~~p-~-----l-~~v~~g~~------~~~~i~---- 59 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG------FTP-A-----F-PHLAMGWR------KFEDIS---- 59 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE------CGG-G-----H-HHHHHTCS------CGGGSE----
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc------cCc-c-----H-HHHhcCCC------CHHHhh----
Confidence 37999999999999999999865 8999999876210 000 0 0 00100000 000000
Q ss_pred CcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcceeEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 129 QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 129 ~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
.+ +.+ .+++.|++++.++|++++. +. .+|++.+| .++.+|.||.|+|
T Consensus 60 -----------~~---~~~----~~~~~gv~~i~~~v~~Id~----~~-~~V~~~~g----------~~i~YD~LViAtG 106 (430)
T 3hyw_A 60 -----------VP---LAP----LLPKFNIEFINEKAESIDP----DA-NTVTTQSG----------KKIEYDYLVIATG 106 (430)
T ss_dssp -----------EE---STT----TGGGGTEEEECSCEEEEET----TT-TEEEETTC----------CEEECSEEEECCC
T ss_pred -----------hc---HHH----HHHHCCcEEEEeEEEEEEC----CC-CEEEECCC----------CEEECCEEEEeCC
Confidence 01 011 1224589999999988872 22 35677776 7899999999999
Q ss_pred CC
Q 012488 209 AN 210 (462)
Q Consensus 209 ~~ 210 (462)
..
T Consensus 107 ~~ 108 (430)
T 3hyw_A 107 PK 108 (430)
T ss_dssp CE
T ss_pred CC
Confidence 74
No 157
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.41 E-value=1.6e-06 Score=86.93 Aligned_cols=103 Identities=26% Similarity=0.266 Sum_probs=76.1
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+.... .
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------~----------------------------- 207 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP------------Q----------------------------- 207 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------------T-----------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc------------c-----------------------------
Confidence 35899999999999999999999999999998763100 0
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEe-ccCCccCCCCceeEEEecEEEecC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYT-EYDGTKGGVGEKRTLEVDAVIGAD 207 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~~~~~adlvI~Ad 207 (462)
....+.+.+.+.+++.|++++.++ |.+++. +++.+.+.+. +. +|+..++.+|.||.|+
T Consensus 208 -----------~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~---~~~~~~v~~~~~~------~g~~~~i~~D~vv~a~ 267 (464)
T 2eq6_A 208 -----------GDPETAALLRRALEKEGIRVRTKTKAVGYEK---KKDGLHVRLEPAE------GGEGEEVVVDKVLVAV 267 (464)
T ss_dssp -----------SCHHHHHHHHHHHHHTTCEEECSEEEEEEEE---ETTEEEEEEEETT------CCSCEEEEESEEEECS
T ss_pred -----------cCHHHHHHHHHHHHhcCCEEEcCCEEEEEEE---eCCEEEEEEeecC------CCceeEEEcCEEEECC
Confidence 002355667777888999999997 888873 2334667765 40 0222489999999999
Q ss_pred CCChHh
Q 012488 208 GANSRV 213 (462)
Q Consensus 208 G~~S~v 213 (462)
|..+..
T Consensus 268 G~~p~~ 273 (464)
T 2eq6_A 268 GRKPRT 273 (464)
T ss_dssp CEEESC
T ss_pred CcccCC
Confidence 987754
No 158
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.39 E-value=3.4e-07 Score=90.08 Aligned_cols=33 Identities=27% Similarity=0.266 Sum_probs=31.3
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC--cEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGV--ETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~--~v~v~E~~~ 83 (462)
.||+|||||++|+++|..|++.|+ +|+|||+.+
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~ 36 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEK 36 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCC
Confidence 489999999999999999999999 899999987
No 159
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.39 E-value=7.4e-07 Score=86.40 Aligned_cols=32 Identities=28% Similarity=0.526 Sum_probs=30.6
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.||+||||||||+++|..|++.| +|+|+|+++
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~ 40 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEP 40 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCC
Confidence 59999999999999999999999 999999986
No 160
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.39 E-value=1.1e-06 Score=85.79 Aligned_cols=99 Identities=16% Similarity=0.164 Sum_probs=76.1
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+.... .
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------~----------------------------- 183 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP------------G----------------------------- 183 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST------------T-----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh------------c-----------------------------
Confidence 35899999999999999999999999999998763100 0
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
.....+.+.+.+.+++.|++++.++ |.++.. +++.+.+.+.+| .++++|.||.|+|
T Consensus 184 ----------~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~---~~~~~~v~~~~g----------~~i~~d~vv~a~G 240 (384)
T 2v3a_A 184 ----------LLHPAAAKAVQAGLEGLGVRFHLGPVLASLKK---AGEGLEAHLSDG----------EVIPCDLVVSAVG 240 (384)
T ss_dssp ----------TSCHHHHHHHHHHHHTTTCEEEESCCEEEEEE---ETTEEEEEETTS----------CEEEESEEEECSC
T ss_pred ----------ccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEe---cCCEEEEEECCC----------CEEECCEEEECcC
Confidence 0012345667777788899999887 888873 233467777665 6899999999999
Q ss_pred CChH
Q 012488 209 ANSR 212 (462)
Q Consensus 209 ~~S~ 212 (462)
..+.
T Consensus 241 ~~p~ 244 (384)
T 2v3a_A 241 LRPR 244 (384)
T ss_dssp EEEC
T ss_pred CCcC
Confidence 8775
No 161
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.37 E-value=8.5e-07 Score=90.26 Aligned_cols=36 Identities=28% Similarity=0.439 Sum_probs=33.6
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..++||+|||||++|+++|+.|++.|++|+|||+++
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 76 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWP 76 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 446899999999999999999999999999999986
No 162
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.37 E-value=2.2e-07 Score=93.88 Aligned_cols=33 Identities=24% Similarity=0.383 Sum_probs=31.1
Q ss_pred CCccEEEECCchHHHHHHHHHHH-CCCcEEEEcC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAK-NGVETFLIER 81 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~-~g~~v~v~E~ 81 (462)
+++||+||||||+|+++|+.|++ .|++|+|||+
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 35899999999999999999999 9999999994
No 163
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.37 E-value=1.7e-06 Score=86.37 Aligned_cols=99 Identities=22% Similarity=0.188 Sum_probs=74.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+... .. ++.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l------------~~--~~~------------------------ 208 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL------------PS--FDP------------------------ 208 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS------------TT--SCH------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh------------hh--hhH------------------------
Confidence 3489999999999999999999999999999875210 00 000
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
.+.+.+.+.+++.|++++.++ |.+++. ++++.+.|.+.+| .++.+|.||.|+|
T Consensus 209 --------------~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~~~~~~~v~~~~g----------~~i~~D~vv~a~G 262 (450)
T 1ges_A 209 --------------MISETLVEVMNAEGPQLHTNAIPKAVVK--NTDGSLTLELEDG----------RSETVDCLIWAIG 262 (450)
T ss_dssp --------------HHHHHHHHHHHHHSCEEECSCCEEEEEE--CTTSCEEEEETTS----------CEEEESEEEECSC
T ss_pred --------------HHHHHHHHHHHHCCCEEEeCCEEEEEEE--eCCcEEEEEECCC----------cEEEcCEEEECCC
Confidence 144556677777899999987 988873 2233467777766 6899999999999
Q ss_pred CChH
Q 012488 209 ANSR 212 (462)
Q Consensus 209 ~~S~ 212 (462)
..+.
T Consensus 263 ~~p~ 266 (450)
T 1ges_A 263 REPA 266 (450)
T ss_dssp EEES
T ss_pred CCcC
Confidence 7664
No 164
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.37 E-value=1.8e-06 Score=86.30 Aligned_cols=99 Identities=18% Similarity=0.158 Sum_probs=75.2
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.... . .
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~------------~--~-------------------------- 206 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILP------------T--M-------------------------- 206 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT------------T--S--------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcccc------------c--c--------------------------
Confidence 45899999999999999999999999999998763100 0 0
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
...+.+.|.+.+++.|++++.++ |.+++. +++.+.+.+.++ .++.+|.||.|+|
T Consensus 207 ------------~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~---~~~~v~v~~~~g----------~~i~~D~vv~A~G 261 (455)
T 2yqu_A 207 ------------DLEVSRAAERVFKKQGLTIRTGVRVTAVVP---EAKGARVELEGG----------EVLEADRVLVAVG 261 (455)
T ss_dssp ------------CHHHHHHHHHHHHHHTCEEECSCCEEEEEE---ETTEEEEEETTS----------CEEEESEEEECSC
T ss_pred ------------CHHHHHHHHHHHHHCCCEEEECCEEEEEEE---eCCEEEEEECCC----------eEEEcCEEEECcC
Confidence 01345556677777899999987 988873 233466666555 6899999999999
Q ss_pred CChHh
Q 012488 209 ANSRV 213 (462)
Q Consensus 209 ~~S~v 213 (462)
..+..
T Consensus 262 ~~p~~ 266 (455)
T 2yqu_A 262 RRPYT 266 (455)
T ss_dssp EEECC
T ss_pred CCcCC
Confidence 87753
No 165
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.35 E-value=7.4e-07 Score=87.75 Aligned_cols=106 Identities=17% Similarity=0.153 Sum_probs=68.0
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCc--EEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEe
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVE--TFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVD 126 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~--v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 126 (462)
+++||+|||||++|+++|..|++.|++ |+|+|+.+... ... ..+...+..... +.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~----~~~-------~~~~~~~~~~~~-------~~----- 62 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP----YDR-------PPLSKDFMAHGD-------AE----- 62 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC----BCS-------GGGGTHHHHHCC-------GG-----
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCc----ccC-------CCCCHHHhCCCc-------hh-----
Confidence 467999999999999999999999984 99999976321 000 001111111000 00
Q ss_pred ccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEe
Q 012488 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIG 205 (462)
Q Consensus 127 ~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~ 205 (462)
. . .++ .+++.|++++.++ |..+.. + ...|.+.++ .++.+|.||.
T Consensus 63 ------~--~--~~~----------~~~~~~v~~~~~~~v~~i~~---~--~~~v~~~~g----------~~~~~d~lvi 107 (408)
T 2gqw_A 63 ------K--I--RLD----------CKRAPEVEWLLGVTAQSFDP---Q--AHTVALSDG----------RTLPYGTLVL 107 (408)
T ss_dssp ------G--S--BCC----------CTTSCSCEEEETCCEEEEET---T--TTEEEETTS----------CEEECSEEEE
T ss_pred ------h--h--hHH----------HHHHCCCEEEcCCEEEEEEC---C--CCEEEECCC----------CEEECCEEEE
Confidence 0 0 000 1235689999987 888872 1 235666665 6899999999
Q ss_pred cCCCChH
Q 012488 206 ADGANSR 212 (462)
Q Consensus 206 AdG~~S~ 212 (462)
|+|....
T Consensus 108 AtG~~~~ 114 (408)
T 2gqw_A 108 ATGAAPR 114 (408)
T ss_dssp CCCEEEC
T ss_pred CCCCCCC
Confidence 9997654
No 166
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.35 E-value=7.7e-07 Score=91.56 Aligned_cols=34 Identities=26% Similarity=0.388 Sum_probs=31.5
Q ss_pred ccEEEECCchHHHHHHHHHHHC--CCcEEEEcCCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKN--GVETFLIERKLD 84 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~--g~~v~v~E~~~~ 84 (462)
.||+||||||||+++|..|++. |++|+|||+.+.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~ 37 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEY 37 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCC
Confidence 4899999999999999999998 899999999873
No 167
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.34 E-value=1.3e-07 Score=94.86 Aligned_cols=35 Identities=43% Similarity=0.491 Sum_probs=32.6
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.++||+||||||+|+++|+.|++.|++|+|||++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 37 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT 37 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 35799999999999999999999999999999873
No 168
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.33 E-value=8.5e-07 Score=89.53 Aligned_cols=113 Identities=22% Similarity=0.170 Sum_probs=69.4
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEecc
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (462)
.++||+||||||+|+++|..|+++ ++|+|||+++.. |+.+.... . . ..+
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~----GG~~~~~~---------------~--~---------~~g 155 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWL----GGDMWLKG---------------I--K---------QEG 155 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSS----SCSGGGTC---------------S--E---------ETT
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCC----CCeeeccc---------------c--c---------cCC
Confidence 357999999999999999999999 999999998632 22111000 0 0 000
Q ss_pred CcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecC
Q 012488 129 QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGAD 207 (462)
Q Consensus 129 ~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~Ad 207 (462)
... ....+...+.+.. +.|++++.+. |.++.. ++..+.+...+. ++...+.+|.||.|+
T Consensus 156 -----~~~----~~~~~~~~l~~~l-~~~v~~~~~~~v~~i~~---~~~~~~~~~~~~-------~~~~~~~~d~lvlAt 215 (493)
T 1y56_A 156 -----FNK----DSRKVVEELVGKL-NENTKIYLETSALGVFD---KGEYFLVPVVRG-------DKLIEILAKRVVLAT 215 (493)
T ss_dssp -----TTE----EHHHHHHHHHHTC-CTTEEEETTEEECCCEE---CSSSEEEEEEET-------TEEEEEEESCEEECC
T ss_pred -----CCC----CHHHHHHHHHHHH-hcCCEEEcCCEEEEEEc---CCcEEEEEEecC-------CeEEEEECCEEEECC
Confidence 000 1223333444433 5588988877 777762 233344433222 222479999999999
Q ss_pred CCChH
Q 012488 208 GANSR 212 (462)
Q Consensus 208 G~~S~ 212 (462)
|....
T Consensus 216 Ga~~~ 220 (493)
T 1y56_A 216 GAIDS 220 (493)
T ss_dssp CEEEC
T ss_pred CCCcc
Confidence 97543
No 169
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.29 E-value=2.9e-07 Score=93.44 Aligned_cols=36 Identities=31% Similarity=0.548 Sum_probs=33.3
Q ss_pred CCCccEEEECCchHHHHHHHHHHH-CCCcEEEEcCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAK-NGVETFLIERKL 83 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~-~g~~v~v~E~~~ 83 (462)
.+++||+|||||++||++|+.|++ .|++|+|+|+++
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~ 44 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNE 44 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSS
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCC
Confidence 457899999999999999999997 599999999987
No 170
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.29 E-value=9.9e-07 Score=86.10 Aligned_cols=34 Identities=24% Similarity=0.247 Sum_probs=31.0
Q ss_pred CccEEEECCchHHHHHHHHHHHCC--CcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNG--VETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g--~~v~v~E~~~ 83 (462)
++||+|||||+||+++|..|++.| .+|+|+|++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 479999999999999999999998 5689999875
No 171
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.29 E-value=5.6e-06 Score=83.21 Aligned_cols=106 Identities=13% Similarity=0.167 Sum_probs=77.1
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+.... .+ +
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------~~--~------------------------- 223 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA------------SM--D------------------------- 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS------------SS--C-------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc------------cc--C-------------------------
Confidence 45899999999999999999999999999998762110 00 0
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
..+.+.+.+.+++.|++++.++ |.++... ++++.+.+.+.+. .+++..++.+|.||.|.|
T Consensus 224 -------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~~~~~v~~~~~-----~~g~~~~~~~D~vv~a~G 284 (478)
T 1v59_A 224 -------------GEVAKATQKFLKKQGLDFKLSTKVISAKRN-DDKNVVEIVVEDT-----KTNKQENLEAEVLLVAVG 284 (478)
T ss_dssp -------------HHHHHHHHHHHHHTTCEEECSEEEEEEEEE-TTTTEEEEEEEET-----TTTEEEEEEESEEEECSC
T ss_pred -------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEe-cCCCeEEEEEEEc-----CCCCceEEECCEEEECCC
Confidence 3456677778888999999997 8888721 0233466666521 112337899999999999
Q ss_pred CChHh
Q 012488 209 ANSRV 213 (462)
Q Consensus 209 ~~S~v 213 (462)
..+..
T Consensus 285 ~~p~~ 289 (478)
T 1v59_A 285 RRPYI 289 (478)
T ss_dssp EEECC
T ss_pred CCcCC
Confidence 76643
No 172
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.28 E-value=2.7e-07 Score=93.19 Aligned_cols=33 Identities=27% Similarity=0.339 Sum_probs=31.0
Q ss_pred CCccEEEECCchHHHHHHHHHHH-CCCcEEEEcC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAK-NGVETFLIER 81 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~-~g~~v~v~E~ 81 (462)
.++||+||||||+|+++|+.|++ .|++|+|||+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 35899999999999999999999 9999999994
No 173
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.28 E-value=1.7e-06 Score=84.83 Aligned_cols=104 Identities=21% Similarity=0.334 Sum_probs=65.6
Q ss_pred cEEEECCchHHHHHHHHHHHCC--CcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNG--VETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g--~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
+|+|||||+||+++|..|++.+ .+|+|||+++... .|. ++..+..... ..
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~-~~p------------~~~~v~~g~~-------------~~-- 55 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYY-TCY------------MSNEVIGGDR-------------EL-- 55 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEE-CST------------THHHHHHTSS-------------CG--
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCC-Ccc------------CHHHHhcCCC-------------CH--
Confidence 7999999999999999998865 6899999876311 000 1111110000 00
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcceeEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGA 209 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~ 209 (462)
... ... ++ .+.+.|++++.++|+.++. +. ..+.+.+| .++.+|.||.|+|.
T Consensus 56 ----~~~--~~~---~~-----~~~~~gv~~i~~~v~~id~----~~-~~v~~~~g----------~~i~yd~LviAtG~ 106 (401)
T 3vrd_B 56 ----ASL--RVG---YD-----GLRAHGIQVVHDSALGIDP----DK-KLVKTAGG----------AEFAYDRCVVAPGI 106 (401)
T ss_dssp ----GGG--EEC---SH-----HHHHTTCEEECSCEEEEET----TT-TEEEETTS----------CEEECSEEEECCCE
T ss_pred ----HHH--hhC---HH-----HHHHCCCEEEEeEEEEEEc----cC-cEEEeccc----------ceeecceeeeccCC
Confidence 000 001 11 2235689999999988872 22 34566666 78999999999997
Q ss_pred ChH
Q 012488 210 NSR 212 (462)
Q Consensus 210 ~S~ 212 (462)
...
T Consensus 107 ~~~ 109 (401)
T 3vrd_B 107 DLL 109 (401)
T ss_dssp EEC
T ss_pred ccc
Confidence 543
No 174
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.27 E-value=1.4e-07 Score=94.38 Aligned_cols=34 Identities=35% Similarity=0.567 Sum_probs=31.9
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK 82 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~ 82 (462)
.++||+||||||||+++|..|++.|++|+|||+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 3589999999999999999999999999999994
No 175
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.27 E-value=1.2e-06 Score=90.62 Aligned_cols=35 Identities=34% Similarity=0.510 Sum_probs=32.7
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK 82 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~ 82 (462)
...+||+||||||||+++|..|++.|++|+|||+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 45689999999999999999999999999999984
No 176
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.24 E-value=7.2e-06 Score=81.66 Aligned_cols=98 Identities=22% Similarity=0.206 Sum_probs=73.3
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+..... .+
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----------~~---------------------------- 189 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV-----------YL---------------------------- 189 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-----------TC----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc-----------cC----------------------------
Confidence 468999999999999999999999999999987621000 00
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
...+.+.+.+.+++.|++++.++ |.++.. ++....+.+ ++ .++++|.||.|+|
T Consensus 190 ------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~---~~~v~~v~~-~~----------~~i~~d~vi~a~G 243 (447)
T 1nhp_A 190 ------------DKEFTDVLTEEMEANNITIATGETVERYEG---DGRVQKVVT-DK----------NAYDADLVVVAVG 243 (447)
T ss_dssp ------------CHHHHHHHHHHHHTTTEEEEESCCEEEEEC---SSBCCEEEE-SS----------CEEECSEEEECSC
T ss_pred ------------CHHHHHHHHHHHHhCCCEEEcCCEEEEEEc---cCcEEEEEE-CC----------CEEECCEEEECcC
Confidence 02356677788888999999987 888872 222223444 33 5799999999999
Q ss_pred CChH
Q 012488 209 ANSR 212 (462)
Q Consensus 209 ~~S~ 212 (462)
..+.
T Consensus 244 ~~p~ 247 (447)
T 1nhp_A 244 VRPN 247 (447)
T ss_dssp EEES
T ss_pred CCCC
Confidence 8764
No 177
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.22 E-value=1.9e-06 Score=86.90 Aligned_cols=35 Identities=26% Similarity=0.470 Sum_probs=32.0
Q ss_pred CCccEEEECCchHHHHHHHHHHHC--CCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKN--GVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~--g~~v~v~E~~~ 83 (462)
.++||+|||||+||+++|..|++. |.+|+|||+.+
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~ 46 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDP 46 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 358999999999999999999876 89999999986
No 178
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.22 E-value=4e-06 Score=83.90 Aligned_cols=98 Identities=23% Similarity=0.185 Sum_probs=73.7
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
-+|+|||||+.|+-+|..|++.|.+|+|+|+.+... .. ++.
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l------------~~--~~~------------------------- 207 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL------------FQ--FDP------------------------- 207 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS------------TT--SCH-------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc------------cc--cCH-------------------------
Confidence 489999999999999999999999999999875210 00 001
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCcee-EEEecEEEecCC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKR-TLEVDAVIGADG 208 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~adlvI~AdG 208 (462)
.+.+.+.+.+++.|++++.++ |.++.. + ++.+.|.+.+| . ++.+|.||.|+|
T Consensus 208 -------------~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~-~~~~~v~~~~G----------~~~i~~D~vv~a~G 261 (463)
T 2r9z_A 208 -------------LLSATLAENMHAQGIETHLEFAVAALER--D-AQGTTLVAQDG----------TRLEGFDSVIWAVG 261 (463)
T ss_dssp -------------HHHHHHHHHHHHTTCEEESSCCEEEEEE--E-TTEEEEEETTC----------CEEEEESEEEECSC
T ss_pred -------------HHHHHHHHHHHHCCCEEEeCCEEEEEEE--e-CCeEEEEEeCC----------cEEEEcCEEEECCC
Confidence 122455666778899999987 888873 2 22367777665 5 899999999999
Q ss_pred CChHh
Q 012488 209 ANSRV 213 (462)
Q Consensus 209 ~~S~v 213 (462)
..+..
T Consensus 262 ~~p~~ 266 (463)
T 2r9z_A 262 RAPNT 266 (463)
T ss_dssp EEESC
T ss_pred CCcCC
Confidence 87653
No 179
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.20 E-value=8.5e-06 Score=81.34 Aligned_cols=101 Identities=22% Similarity=0.319 Sum_probs=74.7
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+... .. .
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l------------~~--~-------------------------- 209 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL------------SG--F-------------------------- 209 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS------------TT--S--------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc------------cc--c--------------------------
Confidence 4589999999999999999999999999999875310 00 0
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
-..+.+.+.+.+++.|++++.++ |.+++. +++.+.+.+.+. ++..++.+|.||.|+|
T Consensus 210 ------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~---~~~~~~v~~~~~-------g~~~~~~~D~vv~a~G 267 (455)
T 1ebd_A 210 ------------EKQMAAIIKKRLKKKGVEVVTNALAKGAEE---REDGVTVTYEAN-------GETKTIDADYVLVTVG 267 (455)
T ss_dssp ------------CHHHHHHHHHHHHHTTCEEEESEEEEEEEE---ETTEEEEEEEET-------TEEEEEEESEEEECSC
T ss_pred ------------CHHHHHHHHHHHHHCCCEEEeCCEEEEEEE---eCCeEEEEEEeC-------CceeEEEcCEEEECcC
Confidence 01345566777788899999987 888872 233466666521 2337899999999999
Q ss_pred CChH
Q 012488 209 ANSR 212 (462)
Q Consensus 209 ~~S~ 212 (462)
..+.
T Consensus 268 ~~p~ 271 (455)
T 1ebd_A 268 RRPN 271 (455)
T ss_dssp EEES
T ss_pred CCcc
Confidence 7664
No 180
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.19 E-value=5.3e-06 Score=82.34 Aligned_cols=32 Identities=16% Similarity=0.421 Sum_probs=29.6
Q ss_pred cEEEECCchHHHHHHHHHHHCC--CcEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNG--VETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g--~~v~v~E~~~ 83 (462)
+|+||||||||+++|..|++.| .+|+|||+++
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCC
Confidence 7999999999999999999988 5799999976
No 181
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.19 E-value=1.3e-06 Score=85.09 Aligned_cols=37 Identities=27% Similarity=0.560 Sum_probs=34.3
Q ss_pred CCCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 47 TNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 47 ~~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
....+||+|||||++||++|+.|+++|++|+|+|+++
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~ 62 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRP 62 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccC
Confidence 3457899999999999999999999999999999986
No 182
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.18 E-value=1.1e-05 Score=87.89 Aligned_cols=34 Identities=35% Similarity=0.641 Sum_probs=32.5
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.+||+||||||||+++|..|++.|++|+|||+.+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~ 161 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERA 161 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 5799999999999999999999999999999976
No 183
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.15 E-value=1.6e-06 Score=86.60 Aligned_cols=35 Identities=20% Similarity=0.321 Sum_probs=33.4
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.++||+|||||++||++|..|+++|++|+|+|+++
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~ 44 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQD 44 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 46899999999999999999999999999999997
No 184
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.14 E-value=1.3e-05 Score=80.77 Aligned_cols=98 Identities=24% Similarity=0.255 Sum_probs=76.0
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+... ..+ +
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l------------~~~--~------------------------- 231 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL------------RNF--D------------------------- 231 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS------------TTS--C-------------------------
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc------------ccc--C-------------------------
Confidence 4589999999999999999999999999999876210 000 0
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
..+.+.+.+.+++.|++++.+. |.+++. +++.+.|.+.+| .++.+|.||.|+|
T Consensus 232 -------------~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~---~~~~v~v~~~~g----------~~i~aD~Vi~A~G 285 (484)
T 3o0h_A 232 -------------YDLRQLLNDAMVAKGISIIYEATVSQVQS---TENCYNVVLTNG----------QTICADRVMLATG 285 (484)
T ss_dssp -------------HHHHHHHHHHHHHHTCEEESSCCEEEEEE---CSSSEEEEETTS----------CEEEESEEEECCC
T ss_pred -------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEe---eCCEEEEEECCC----------cEEEcCEEEEeeC
Confidence 2244556777778899999987 988873 344577888776 6899999999999
Q ss_pred CChH
Q 012488 209 ANSR 212 (462)
Q Consensus 209 ~~S~ 212 (462)
..+.
T Consensus 286 ~~p~ 289 (484)
T 3o0h_A 286 RVPN 289 (484)
T ss_dssp EEEC
T ss_pred CCcC
Confidence 7654
No 185
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.13 E-value=2.1e-06 Score=82.95 Aligned_cols=35 Identities=26% Similarity=0.486 Sum_probs=33.0
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK 82 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~ 82 (462)
..++||+|||||++||++|+.|+++|++|+|+|++
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 45679999999999999999999999999999998
No 186
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.13 E-value=1.9e-06 Score=85.18 Aligned_cols=35 Identities=40% Similarity=0.627 Sum_probs=33.0
Q ss_pred CCccEEEECCchHHHHHHHHHHHCC-CcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNG-VETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g-~~v~v~E~~~ 83 (462)
+++||+|||||++||++|+.|+++| ++|+|+|+++
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~ 40 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTD 40 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 4679999999999999999999999 9999999976
No 187
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.12 E-value=1.5e-06 Score=85.21 Aligned_cols=34 Identities=26% Similarity=0.417 Sum_probs=32.6
Q ss_pred CccEEEECCchHHHHHHHHHHHC-CCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKN-GVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~-g~~v~v~E~~~ 83 (462)
++||+|||||++||++|+.|++. |++|+|+|+++
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~ 41 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRP 41 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 58999999999999999999999 99999999986
No 188
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.11 E-value=1.3e-05 Score=78.95 Aligned_cols=105 Identities=21% Similarity=0.263 Sum_probs=78.7
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
-+|+|||||+.|+-+|..|++.|.+|+++|+.+... ....
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l------------------~~~~---------------------- 183 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELL------------------VRVL---------------------- 183 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS------------------HHHH----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc------------------hhhc----------------------
Confidence 479999999999999999999999999999876310 0000
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGA 209 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~ 209 (462)
-..+.+.+.+.+++.|++++.+. |.++.. ++....|.+.+| .++.||+||.|.|.
T Consensus 184 -----------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~---~~~~~~v~~~dg----------~~i~aD~Vv~a~G~ 239 (410)
T 3ef6_A 184 -----------GRRIGAWLRGLLTELGVQVELGTGVVGFSG---EGQLEQVMASDG----------RSFVADSALICVGA 239 (410)
T ss_dssp -----------CHHHHHHHHHHHHHHTCEEECSCCEEEEEC---SSSCCEEEETTS----------CEEECSEEEECSCE
T ss_pred -----------CHHHHHHHHHHHHHCCCEEEeCCEEEEEec---cCcEEEEEECCC----------CEEEcCEEEEeeCC
Confidence 02355667777788899999887 888872 233446777776 78999999999998
Q ss_pred ChH--hhhhhcC
Q 012488 210 NSR--VAKSINA 219 (462)
Q Consensus 210 ~S~--vr~~l~~ 219 (462)
.+. +.+.++.
T Consensus 240 ~p~~~l~~~~gl 251 (410)
T 3ef6_A 240 EPADQLARQAGL 251 (410)
T ss_dssp EECCHHHHHTTC
T ss_pred eecHHHHHhCCC
Confidence 764 3444443
No 189
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.10 E-value=1.2e-06 Score=88.46 Aligned_cols=38 Identities=34% Similarity=0.390 Sum_probs=34.3
Q ss_pred CCCCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 46 ~~~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
|+..++||+||||||||+++|+.|++.|++|+|+|+++
T Consensus 4 M~~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 4 MKVINVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp CEEEEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CccCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 44446899999999999999999999999999999965
No 190
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.10 E-value=1.5e-05 Score=80.25 Aligned_cols=99 Identities=21% Similarity=0.123 Sum_probs=75.8
Q ss_pred CccEEEECCchHHHHHHHHHHHC---CCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEe
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKN---GVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVD 126 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~---g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 126 (462)
.-+|+|||||+.|+-+|..|++. |.+|+|+|+.+... .. +
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l------------~~--~----------------------- 229 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL------------RG--F----------------------- 229 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS------------TT--S-----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc------------cc--c-----------------------
Confidence 45899999999999999999999 99999999876210 00 0
Q ss_pred ccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEe
Q 012488 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIG 205 (462)
Q Consensus 127 ~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~ 205 (462)
-..+.+.+.+.+++.|++++.++ |.++.. ++++.+.|.+.+| .++.+|.||.
T Consensus 230 ---------------d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~~~~v~~~~G----------~~i~~D~vv~ 282 (490)
T 1fec_A 230 ---------------DSELRKQLTEQLRANGINVRTHENPAKVTK--NADGTRHVVFESG----------AEADYDVVML 282 (490)
T ss_dssp ---------------CHHHHHHHHHHHHHTTEEEEETCCEEEEEE--CTTSCEEEEETTS----------CEEEESEEEE
T ss_pred ---------------CHHHHHHHHHHHHhCCCEEEeCCEEEEEEE--cCCCEEEEEECCC----------cEEEcCEEEE
Confidence 01245667777888999999987 988873 2223477777665 5899999999
Q ss_pred cCCCChH
Q 012488 206 ADGANSR 212 (462)
Q Consensus 206 AdG~~S~ 212 (462)
|.|..+.
T Consensus 283 a~G~~p~ 289 (490)
T 1fec_A 283 AIGRVPR 289 (490)
T ss_dssp CSCEEES
T ss_pred ccCCCcC
Confidence 9997654
No 191
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.10 E-value=1.5e-06 Score=86.75 Aligned_cols=36 Identities=39% Similarity=0.565 Sum_probs=33.5
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.+++||+|||||++||++|+.|+++|++|+|+|+++
T Consensus 3 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~ 38 (453)
T 2yg5_A 3 TLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARD 38 (453)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCC
Confidence 346799999999999999999999999999999986
No 192
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.08 E-value=1.8e-05 Score=77.99 Aligned_cols=99 Identities=22% Similarity=0.213 Sum_probs=76.1
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||+.|+-+|..|++.|.+|+++|+.+.... .
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~---------------------------------~-------- 190 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLA---------------------------------R-------- 190 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT---------------------------------T--------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhh---------------------------------h--------
Confidence 34799999999999999999999999999998763200 0
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCE-EEEEeccCCccCCCCceeEEEecEEEecC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPY-VLYYTEYDGTKGGVGEKRTLEVDAVIGAD 207 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~adlvI~Ad 207 (462)
. ....+.+.+.+.+++.|++++.+. |.++.. +++.+ .|.+.+| .++.||.||.|.
T Consensus 191 ~----------~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~---~~~~v~~v~l~dG----------~~i~aD~Vv~a~ 247 (415)
T 3lxd_A 191 V----------AGEALSEFYQAEHRAHGVDLRTGAAMDCIEG---DGTKVTGVRMQDG----------SVIPADIVIVGI 247 (415)
T ss_dssp T----------SCHHHHHHHHHHHHHTTCEEEETCCEEEEEE---SSSBEEEEEESSS----------CEEECSEEEECS
T ss_pred h----------cCHHHHHHHHHHHHhCCCEEEECCEEEEEEe---cCCcEEEEEeCCC----------CEEEcCEEEECC
Confidence 0 002355667778888999999887 888873 23334 5777776 789999999999
Q ss_pred CCChH
Q 012488 208 GANSR 212 (462)
Q Consensus 208 G~~S~ 212 (462)
|..+.
T Consensus 248 G~~p~ 252 (415)
T 3lxd_A 248 GIVPC 252 (415)
T ss_dssp CCEES
T ss_pred CCccC
Confidence 98764
No 193
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.08 E-value=1.8e-06 Score=87.69 Aligned_cols=35 Identities=37% Similarity=0.547 Sum_probs=33.0
Q ss_pred CCccEEEECCchHHHHHHHHHHHCC-CcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNG-VETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g-~~v~v~E~~~ 83 (462)
+++||+|||||++||++|..|+++| ++|+|+|+++
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~ 42 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARD 42 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 3579999999999999999999999 9999999987
No 194
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.08 E-value=1.8e-05 Score=77.66 Aligned_cols=106 Identities=20% Similarity=0.223 Sum_probs=78.0
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
.+|+|||+|+.|+-+|..|++.|.+|+++|+.+... . . .
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~------------~---------------------~--------~ 181 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVM------------A---------------------R--------V 181 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT------------T---------------------T--------T
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcch------------h---------------------h--------c
Confidence 479999999999999999999999999999875210 0 0 0
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGA 209 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~ 209 (462)
.-..+.+.+.+.+++.|++++.+. |.++.. +++....|.+.+| .++.||.||.|.|.
T Consensus 182 ----------~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~v~~V~~~dG----------~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 182 ----------VTPEISSYFHDRHSGAGIRMHYGVRATEIAA--EGDRVTGVVLSDG----------NTLPCDLVVVGVGV 239 (404)
T ss_dssp ----------SCHHHHHHHHHHHHHTTCEEECSCCEEEEEE--ETTEEEEEEETTS----------CEEECSEEEECCCE
T ss_pred ----------cCHHHHHHHHHHHHhCCcEEEECCEEEEEEe--cCCcEEEEEeCCC----------CEEEcCEEEECcCC
Confidence 012355677788889999999987 888873 2222234777776 68999999999998
Q ss_pred ChH--hhhhhcC
Q 012488 210 NSR--VAKSINA 219 (462)
Q Consensus 210 ~S~--vr~~l~~ 219 (462)
.+. +.+..+.
T Consensus 240 ~p~~~l~~~~gl 251 (404)
T 3fg2_P 240 IPNVEIAAAAGL 251 (404)
T ss_dssp EECCHHHHHTTC
T ss_pred ccCHHHHHhCCC
Confidence 654 3444443
No 195
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.07 E-value=3e-06 Score=85.51 Aligned_cols=36 Identities=36% Similarity=0.561 Sum_probs=33.7
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
++++||+|||||++||++|+.|+++|++|+|+|+.+
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~ 44 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEART 44 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccC
Confidence 446799999999999999999999999999999987
No 196
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.06 E-value=3.1e-05 Score=78.00 Aligned_cols=104 Identities=19% Similarity=0.195 Sum_probs=77.0
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+... .. ++
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l------------~~--~d------------------------- 238 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTIL------------GG--MD------------------------- 238 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS------------SS--SC-------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccc------------cc--CC-------------------------
Confidence 4589999999999999999999999999999876210 00 00
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
..+.+.+.+.+++.|++++.++ |.+++. .++.+.+.+.+. .+|+..++.+|.||.|.|
T Consensus 239 -------------~~~~~~l~~~l~~~gV~v~~~~~v~~i~~---~~~~~~v~~~~~-----~~g~~~~i~~D~Vi~a~G 297 (491)
T 3urh_A 239 -------------GEVAKQLQRMLTKQGIDFKLGAKVTGAVK---SGDGAKVTFEPV-----KGGEATTLDAEVVLIATG 297 (491)
T ss_dssp -------------HHHHHHHHHHHHHTTCEEECSEEEEEEEE---ETTEEEEEEEET-----TSCCCEEEEESEEEECCC
T ss_pred -------------HHHHHHHHHHHHhCCCEEEECCeEEEEEE---eCCEEEEEEEec-----CCCceEEEEcCEEEEeeC
Confidence 2345566777788899999987 888873 334566777652 113346899999999999
Q ss_pred CChHh
Q 012488 209 ANSRV 213 (462)
Q Consensus 209 ~~S~v 213 (462)
.....
T Consensus 298 ~~p~~ 302 (491)
T 3urh_A 298 RKPST 302 (491)
T ss_dssp CEECC
T ss_pred CccCC
Confidence 86643
No 197
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.06 E-value=3.6e-05 Score=77.05 Aligned_cols=102 Identities=18% Similarity=0.158 Sum_probs=74.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+... .. +
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l------------~~--~-------------------------- 213 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCA------------PT--L-------------------------- 213 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS------------TT--S--------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccc------------cc--C--------------------------
Confidence 4589999999999999999999999999999876310 00 0
Q ss_pred cccCCCeEEeeehHHHHHHHHHHH-HHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERA-EKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGAD 207 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~-~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~Ad 207 (462)
...+.+.+.+.+ ++.|++++.++ |.+++. +++.+.+.+.+. .|+..++.+|.||.|.
T Consensus 214 ------------d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~---~~~~~~v~~~~~------~g~~~~i~~D~vv~a~ 272 (468)
T 2qae_A 214 ------------DEDVTNALVGALAKNEKMKFMTSTKVVGGTN---NGDSVSLEVEGK------NGKRETVTCEALLVSV 272 (468)
T ss_dssp ------------CHHHHHHHHHHHHHHTCCEEECSCEEEEEEE---CSSSEEEEEECC---------EEEEEESEEEECS
T ss_pred ------------CHHHHHHHHHHHhhcCCcEEEeCCEEEEEEE---cCCeEEEEEEcC------CCceEEEECCEEEECC
Confidence 022456677777 88899999987 888873 233466776521 1233579999999999
Q ss_pred CCChH
Q 012488 208 GANSR 212 (462)
Q Consensus 208 G~~S~ 212 (462)
|..+.
T Consensus 273 G~~p~ 277 (468)
T 2qae_A 273 GRRPF 277 (468)
T ss_dssp CEEEC
T ss_pred CcccC
Confidence 98765
No 198
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.05 E-value=2.6e-06 Score=86.01 Aligned_cols=36 Identities=11% Similarity=0.160 Sum_probs=32.8
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+.+.+|||||||+||+.+|..|++.+++|+|||+++
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCC
Confidence 345689999999999999999999999999999876
No 199
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.05 E-value=2.1e-05 Score=78.89 Aligned_cols=103 Identities=18% Similarity=0.205 Sum_probs=75.7
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+.... . .+
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~------------~--~~------------------------- 217 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP------------T--MD------------------------- 217 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST------------T--SC-------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc------------c--cc-------------------------
Confidence 45899999999999999999999999999998763100 0 00
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
..+.+.+.+.+++.|++++.++ |.++.. +++.+.+.+.+. ..|+..++.+|.||.|.|
T Consensus 218 -------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~---~~~~~~v~~~~~-----~~g~~~~~~~D~vv~a~G 276 (470)
T 1dxl_A 218 -------------AEIRKQFQRSLEKQGMKFKLKTKVVGVDT---SGDGVKLTVEPS-----AGGEQTIIEADVVLVSAG 276 (470)
T ss_dssp -------------HHHHHHHHHHHHHSSCCEECSEEEEEEEC---SSSSEEEEEEES-----SSCCCEEEEESEEECCCC
T ss_pred -------------HHHHHHHHHHHHHcCCEEEeCCEEEEEEE---cCCeEEEEEEec-----CCCcceEEECCEEEECCC
Confidence 1345667777888999999987 988872 233467776521 013336899999999999
Q ss_pred CChH
Q 012488 209 ANSR 212 (462)
Q Consensus 209 ~~S~ 212 (462)
..+.
T Consensus 277 ~~p~ 280 (470)
T 1dxl_A 277 RTPF 280 (470)
T ss_dssp EEEC
T ss_pred CCcC
Confidence 7664
No 200
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.04 E-value=2.4e-05 Score=78.64 Aligned_cols=96 Identities=21% Similarity=0.256 Sum_probs=71.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+... ..+ +
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l------------~~~--~------------------------- 226 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIG------------TIY--D------------------------- 226 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTT------------SSS--C-------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchh------------hcC--C-------------------------
Confidence 4589999999999999999999999999999875210 000 0
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCE-EEEEeccCCccCCCCceeEEEecEEEecC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPY-VLYYTEYDGTKGGVGEKRTLEVDAVIGAD 207 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~adlvI~Ad 207 (462)
..+.+.+.+.+++.|++++.++ |.++.. + +.+ .+.+ ++ .++.+|.||.|.
T Consensus 227 -------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~---~-~~v~~v~~-~~----------~~i~~D~vi~a~ 278 (480)
T 3cgb_A 227 -------------GDMAEYIYKEADKHHIEILTNENVKAFKG---N-ERVEAVET-DK----------GTYKADLVLVSV 278 (480)
T ss_dssp -------------HHHHHHHHHHHHHTTCEEECSCCEEEEEE---S-SBEEEEEE-TT----------EEEECSEEEECS
T ss_pred -------------HHHHHHHHHHHHHcCcEEEcCCEEEEEEc---C-CcEEEEEE-CC----------CEEEcCEEEECc
Confidence 2355667778888999999887 888872 2 233 2333 33 589999999999
Q ss_pred CCChH
Q 012488 208 GANSR 212 (462)
Q Consensus 208 G~~S~ 212 (462)
|..+.
T Consensus 279 G~~p~ 283 (480)
T 3cgb_A 279 GVKPN 283 (480)
T ss_dssp CEEES
T ss_pred CCCcC
Confidence 97654
No 201
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.04 E-value=3.9e-05 Score=76.96 Aligned_cols=105 Identities=11% Similarity=0.074 Sum_probs=75.1
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+..... . +
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----------~--~-------------------------- 218 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV-----------G--I-------------------------- 218 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS-----------S--C--------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc-----------c--c--------------------------
Confidence 358999999999999999999999999999987631000 0 0
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
...+.+.+.+.+++.|++++.++ |.++.. ++++.+.+.+.+. .+++..++.+|.||.|.|
T Consensus 219 ------------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~~~~~~~v~~~~~-----~~~~~~~i~~D~vv~a~G 279 (474)
T 1zmd_A 219 ------------DMEISKNFQRILQKQGFKFKLNTKVTGATK--KSDGKIDVSIEAA-----SGGKAEVITCDVLLVCIG 279 (474)
T ss_dssp ------------CHHHHHHHHHHHHHTTCEEECSEEEEEEEE--CTTSCEEEEEEET-----TSCCCEEEEESEEEECSC
T ss_pred ------------CHHHHHHHHHHHHHCCCEEEeCceEEEEEE--cCCceEEEEEEec-----CCCCceEEEcCEEEECcC
Confidence 01244567777788999999997 888873 2222266665421 012336899999999999
Q ss_pred CChH
Q 012488 209 ANSR 212 (462)
Q Consensus 209 ~~S~ 212 (462)
..+.
T Consensus 280 ~~p~ 283 (474)
T 1zmd_A 280 RRPF 283 (474)
T ss_dssp EEEC
T ss_pred CCcC
Confidence 8764
No 202
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.03 E-value=2.8e-05 Score=77.97 Aligned_cols=106 Identities=26% Similarity=0.305 Sum_probs=80.1
Q ss_pred CccEEEECCchHHHHHHHHHHHC-CCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEecc
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKN-GVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~-g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (462)
.-+|+|||||+.|+-+|..|++. |.+|+++|+.+..... .
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~-----------~---------------------------- 199 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPG-----------F---------------------------- 199 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTT-----------T----------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccc-----------c----------------------------
Confidence 35899999999999999999999 9999999987521000 0
Q ss_pred CcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecC
Q 012488 129 QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGAD 207 (462)
Q Consensus 129 ~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~Ad 207 (462)
--..+.+.+.+.+++.|++++.++ |.+++. +++.+.+.+.+| .++.+|.||.|.
T Consensus 200 ------------~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~---~~~~v~v~~~~g----------~~i~aD~Vv~a~ 254 (472)
T 3iwa_A 200 ------------TSKSLSQMLRHDLEKNDVVVHTGEKVVRLEG---ENGKVARVITDK----------RTLDADLVILAA 254 (472)
T ss_dssp ------------SCHHHHHHHHHHHHHTTCEEECSCCEEEEEE---SSSBEEEEEESS----------CEEECSEEEECS
T ss_pred ------------cCHHHHHHHHHHHHhcCCEEEeCCEEEEEEc---cCCeEEEEEeCC----------CEEEcCEEEECC
Confidence 002356777788888999999987 988872 344577878776 689999999999
Q ss_pred CCChH--hhhhhcC
Q 012488 208 GANSR--VAKSINA 219 (462)
Q Consensus 208 G~~S~--vr~~l~~ 219 (462)
|..+. +.+.++.
T Consensus 255 G~~p~~~l~~~~gl 268 (472)
T 3iwa_A 255 GVSPNTQLARDAGL 268 (472)
T ss_dssp CEEECCHHHHHHTC
T ss_pred CCCcCHHHHHhCCc
Confidence 98653 4444443
No 203
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.03 E-value=4.1e-05 Score=77.35 Aligned_cols=100 Identities=13% Similarity=0.227 Sum_probs=75.2
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+... .. ++
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l------------~~--~d------------------------- 216 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL------------RK--FD------------------------- 216 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC------------TT--SC-------------------------
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC------------cc--cc-------------------------
Confidence 4589999999999999999999999999999876310 00 00
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeE-EEecEEEecC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRT-LEVDAVIGAD 207 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~adlvI~Ad 207 (462)
..+.+.+.+.+++.|++++.+. |.++.. ++++.+.|.+.+| .+ +.+|.||.|.
T Consensus 217 -------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~~~~~~~v~~~~g----------~~~~~~D~vi~a~ 271 (500)
T 1onf_A 217 -------------ESVINVLENDMKKNNINIVTFADVVEIKK--VSDKNLSIHLSDG----------RIYEHFDHVIYCV 271 (500)
T ss_dssp -------------HHHHHHHHHHHHHTTCEEECSCCEEEEEE--SSTTCEEEEETTS----------CEEEEESEEEECC
T ss_pred -------------hhhHHHHHHHHHhCCCEEEECCEEEEEEE--cCCceEEEEECCC----------cEEEECCEEEECC
Confidence 1234556677788899999987 988873 2223467777665 45 9999999999
Q ss_pred CCChHh
Q 012488 208 GANSRV 213 (462)
Q Consensus 208 G~~S~v 213 (462)
|.....
T Consensus 272 G~~p~~ 277 (500)
T 1onf_A 272 GRSPDT 277 (500)
T ss_dssp CBCCTT
T ss_pred CCCcCC
Confidence 987654
No 204
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.01 E-value=3.4e-06 Score=85.42 Aligned_cols=35 Identities=40% Similarity=0.453 Sum_probs=32.7
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+.+||+|||||++||++|+.|+++|++|+|+|+++
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~ 46 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEG 46 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCC
Confidence 35799999999999999999999999999999987
No 205
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.01 E-value=4e-05 Score=77.38 Aligned_cols=99 Identities=14% Similarity=0.121 Sum_probs=75.7
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||+.|+-+|..|++.|.+|+++|+.+... .. ++
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l------------~~--~d------------------------- 222 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL------------PY--ED------------------------- 222 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS------------CC--SS-------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc------------cc--cC-------------------------
Confidence 4589999999999999999999999999999876310 00 00
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
..+.+.+.+.+++.|++++.++ |.++.. +++.+.+.+.++ .++.+|.||.|.|
T Consensus 223 -------------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~---~~~~v~v~~~~g----------~~i~aD~Vv~a~G 276 (499)
T 1xdi_A 223 -------------ADAALVLEESFAERGVRLFKNARAASVTR---TGAGVLVTMTDG----------RTVEGSHALMTIG 276 (499)
T ss_dssp -------------HHHHHHHHHHHHHTTCEEETTCCEEEEEE---CSSSEEEEETTS----------CEEEESEEEECCC
T ss_pred -------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEE---eCCEEEEEECCC----------cEEEcCEEEECCC
Confidence 1245567777888999999987 988873 233466665555 6899999999999
Q ss_pred CChHh
Q 012488 209 ANSRV 213 (462)
Q Consensus 209 ~~S~v 213 (462)
..+..
T Consensus 277 ~~p~~ 281 (499)
T 1xdi_A 277 SVPNT 281 (499)
T ss_dssp EEECC
T ss_pred CCcCC
Confidence 87753
No 206
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.00 E-value=3.4e-05 Score=77.81 Aligned_cols=100 Identities=23% Similarity=0.230 Sum_probs=75.5
Q ss_pred CccEEEECCchHHHHHHHHHHHC---CCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEe
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKN---GVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVD 126 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~---g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 126 (462)
.-+|+|||||..|+-+|..|++. |.+|+|+|+.+... .. ++
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l------------~~--~d---------------------- 234 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL------------RG--FD---------------------- 234 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC------------TT--SC----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc------------cc--cC----------------------
Confidence 35899999999999999999999 99999999875210 00 00
Q ss_pred ccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEe
Q 012488 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIG 205 (462)
Q Consensus 127 ~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~ 205 (462)
..+.+.+.+.+++.|++++.++ |.++.. ++++.+.|.+.+| .++.+|.||.
T Consensus 235 ----------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~~~~v~~~~G----------~~i~~D~vv~ 286 (495)
T 2wpf_A 235 ----------------ETIREEVTKQLTANGIEIMTNENPAKVSL--NTDGSKHVTFESG----------KTLDVDVVMM 286 (495)
T ss_dssp ----------------HHHHHHHHHHHHHTTCEEEESCCEEEEEE--CTTSCEEEEETTS----------CEEEESEEEE
T ss_pred ----------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEE--cCCceEEEEECCC----------cEEEcCEEEE
Confidence 1234566677788899999987 988873 2233467777766 6899999999
Q ss_pred cCCCChHh
Q 012488 206 ADGANSRV 213 (462)
Q Consensus 206 AdG~~S~v 213 (462)
|.|..+..
T Consensus 287 a~G~~p~~ 294 (495)
T 2wpf_A 287 AIGRIPRT 294 (495)
T ss_dssp CSCEEECC
T ss_pred CCCCcccc
Confidence 99976643
No 207
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.00 E-value=1.1e-05 Score=81.05 Aligned_cols=103 Identities=16% Similarity=0.101 Sum_probs=74.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+... .. ++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l------------~~--~~------------------------- 225 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLM------------QG--AD------------------------- 225 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSS------------TT--SC-------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc------------cc--cC-------------------------
Confidence 4589999999999999999999999999999876310 00 00
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
..+.+.+.+.+++.|++++.++ |.+++. +++.+.+.+.+. .++..++.+|.||.|.|
T Consensus 226 -------------~~~~~~l~~~l~~~gV~i~~~~~v~~i~~---~~~~~~v~~~~~------~~~g~~~~~D~vv~a~G 283 (482)
T 1ojt_A 226 -------------RDLVKVWQKQNEYRFDNIMVNTKTVAVEP---KEDGVYVTFEGA------NAPKEPQRYDAVLVAAG 283 (482)
T ss_dssp -------------HHHHHHHHHHHGGGEEEEECSCEEEEEEE---ETTEEEEEEESS------SCCSSCEEESCEEECCC
T ss_pred -------------HHHHHHHHHHHHhcCCEEEECCEEEEEEE---cCCeEEEEEecc------CCCceEEEcCEEEECcC
Confidence 1244556667778899999987 888873 233466777651 01115788999999999
Q ss_pred CChHh
Q 012488 209 ANSRV 213 (462)
Q Consensus 209 ~~S~v 213 (462)
..+..
T Consensus 284 ~~p~~ 288 (482)
T 1ojt_A 284 RAPNG 288 (482)
T ss_dssp EEECG
T ss_pred CCcCC
Confidence 87653
No 208
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.98 E-value=2.4e-05 Score=77.41 Aligned_cols=106 Identities=20% Similarity=0.256 Sum_probs=75.9
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
-+|+|||||+.|+-+|..|++.|.+|+++|+.+... ... +
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l------------~~~-~--------------------------- 189 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVL------------ERV-T--------------------------- 189 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT------------TTT-S---------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc------------cch-h---------------------------
Confidence 489999999999999999999999999999875210 000 0
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCE-EEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPY-VLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
-..+.+.+.+.+++.|++++.++ |.++... .+++.+ .|.+.+| .++.+|.||.|.|
T Consensus 190 -----------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~~~v~~v~~~~G----------~~i~~D~Vv~a~G 247 (431)
T 1q1r_A 190 -----------APPVSAFYEHLHREAGVDIRTGTQVCGFEMS-TDQQKVTAVLCEDG----------TRLPADLVIAGIG 247 (431)
T ss_dssp -----------CHHHHHHHHHHHHHHTCEEECSCCEEEEEEC-TTTCCEEEEEETTS----------CEEECSEEEECCC
T ss_pred -----------hHHHHHHHHHHHHhCCeEEEeCCEEEEEEec-cCCCcEEEEEeCCC----------CEEEcCEEEECCC
Confidence 01244556677778899999987 8888720 022334 5677666 6899999999999
Q ss_pred CChH--hhhhhc
Q 012488 209 ANSR--VAKSIN 218 (462)
Q Consensus 209 ~~S~--vr~~l~ 218 (462)
..+. +.+.++
T Consensus 248 ~~p~~~l~~~~g 259 (431)
T 1q1r_A 248 LIPNCELASAAG 259 (431)
T ss_dssp EEECCHHHHHTT
T ss_pred CCcCcchhhccC
Confidence 7653 344444
No 209
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.98 E-value=3.3e-05 Score=78.47 Aligned_cols=99 Identities=19% Similarity=0.212 Sum_probs=75.0
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
-+|+|||||..|+-+|..|++.|.+|+++|+.+... .. ++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l------------~~--~~-------------------------- 254 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK------------LI--KD-------------------------- 254 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT------------TC--CS--------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc------------cc--cc--------------------------
Confidence 589999999999999999999999999999876310 00 00
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCC---EEEEEeccCCccCCCCcee-EEEecEEEe
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQP---YVLYYTEYDGTKGGVGEKR-TLEVDAVIG 205 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~-~~~adlvI~ 205 (462)
..+.+.|.+.+++.|++++.++ |.++.. .+++. +.|.+.+| . ++.+|.||.
T Consensus 255 ------------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~--~~~~~v~~~~v~~~~G----------~~~i~aD~Vv~ 310 (523)
T 1mo9_A 255 ------------NETRAYVLDRMKEQGMEIISGSNVTRIEE--DANGRVQAVVAMTPNG----------EMRIETDFVFL 310 (523)
T ss_dssp ------------HHHHHHHHHHHHHTTCEEESSCEEEEEEE--CTTSBEEEEEEEETTE----------EEEEECSCEEE
T ss_pred ------------HHHHHHHHHHHHhCCcEEEECCEEEEEEE--cCCCceEEEEEEECCC----------cEEEEcCEEEE
Confidence 1234667777888999999987 988872 22322 55666555 4 899999999
Q ss_pred cCCCChHh
Q 012488 206 ADGANSRV 213 (462)
Q Consensus 206 AdG~~S~v 213 (462)
|.|..+..
T Consensus 311 A~G~~p~~ 318 (523)
T 1mo9_A 311 GLGEQPRS 318 (523)
T ss_dssp CCCCEECC
T ss_pred CcCCccCC
Confidence 99987754
No 210
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.97 E-value=4.3e-05 Score=78.45 Aligned_cols=100 Identities=20% Similarity=0.265 Sum_probs=74.1
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
-+|+|||||+.|+-+|..|++.|.+|+++|+.+.... . +
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------~--~--------------------------- 190 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT------------P--V--------------------------- 190 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT------------T--S---------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch------------h--c---------------------------
Confidence 4899999999999999999999999999998752100 0 0
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecC----------------CCCCCEEEEEeccCCccCCCC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPR----------------NFEQPYVLYYTEYDGTKGGVG 193 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~----------------~~~~~~~v~~~~~~~~~~~~~ 193 (462)
-..+.+.+.+.+++.|++++.++ +.++.... ..++.+.+.+.+|
T Consensus 191 -----------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-------- 251 (565)
T 3ntd_A 191 -----------DREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNG-------- 251 (565)
T ss_dssp -----------CHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTS--------
T ss_pred -----------CHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCC--------
Confidence 01234566677778899999887 88887310 0234566766665
Q ss_pred ceeEEEecEEEecCCCChH
Q 012488 194 EKRTLEVDAVIGADGANSR 212 (462)
Q Consensus 194 ~~~~~~adlvI~AdG~~S~ 212 (462)
.++.+|.||.|.|..+.
T Consensus 252 --~~i~~D~vi~a~G~~p~ 268 (565)
T 3ntd_A 252 --ELLETDLLIMAIGVRPE 268 (565)
T ss_dssp --CEEEESEEEECSCEEEC
T ss_pred --CEEEcCEEEECcCCccc
Confidence 68999999999998764
No 211
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.96 E-value=2.1e-05 Score=78.56 Aligned_cols=99 Identities=23% Similarity=0.236 Sum_probs=71.7
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+... .. ++
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l------------~~--~~------------------------- 211 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERIL------------PT--YD------------------------- 211 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS------------TT--SC-------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccc------------cc--cC-------------------------
Confidence 4589999999999999999999999999999876310 00 00
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
..+.+.+.+.+++.|++++.++ |.+++ . ++ +.+...+ |+..++.+|.||.|+|
T Consensus 212 -------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~---~-~~-v~v~~~~--------G~~~~i~~D~vv~a~G 265 (458)
T 1lvl_A 212 -------------SELTAPVAESLKKLGIALHLGHSVEGYE---N-GC-LLANDGK--------GGQLRLEADRVLVAVG 265 (458)
T ss_dssp -------------HHHHHHHHHHHHHHTCEEETTCEEEEEE---T-TE-EEEECSS--------SCCCEECCSCEEECCC
T ss_pred -------------HHHHHHHHHHHHHCCCEEEECCEEEEEE---e-CC-EEEEECC--------CceEEEECCEEEECcC
Confidence 1244456666777899999987 88887 2 22 4443212 3336799999999999
Q ss_pred CChHh
Q 012488 209 ANSRV 213 (462)
Q Consensus 209 ~~S~v 213 (462)
..+..
T Consensus 266 ~~p~~ 270 (458)
T 1lvl_A 266 RRPRT 270 (458)
T ss_dssp EEECC
T ss_pred CCcCC
Confidence 87653
No 212
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.96 E-value=7.6e-05 Score=75.19 Aligned_cols=101 Identities=20% Similarity=0.186 Sum_probs=74.2
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||+.|+-+|..|++.|.+|+++|+.+.... . ++
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~------------~--~d------------------------- 214 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVAN------------L--QD------------------------- 214 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTT------------C--CC-------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc------------c--CC-------------------------
Confidence 45899999999999999999999999999998763210 0 00
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
..+.+.+.+.+++. ++++.+. |..++. +++.+.+.+.+. .|+..++.+|.||.|.|
T Consensus 215 -------------~~~~~~l~~~l~~~-V~i~~~~~v~~i~~---~~~~v~v~~~~~------~G~~~~i~~D~Vi~a~G 271 (492)
T 3ic9_A 215 -------------EEMKRYAEKTFNEE-FYFDAKARVISTIE---KEDAVEVIYFDK------SGQKTTESFQYVLAATG 271 (492)
T ss_dssp -------------HHHHHHHHHHHHTT-SEEETTCEEEEEEE---CSSSEEEEEECT------TCCEEEEEESEEEECSC
T ss_pred -------------HHHHHHHHHHHhhC-cEEEECCEEEEEEE---cCCEEEEEEEeC------CCceEEEECCEEEEeeC
Confidence 02445566666666 9999887 888873 344577777631 14446899999999999
Q ss_pred CChH
Q 012488 209 ANSR 212 (462)
Q Consensus 209 ~~S~ 212 (462)
....
T Consensus 272 ~~p~ 275 (492)
T 3ic9_A 272 RKAN 275 (492)
T ss_dssp CEES
T ss_pred CccC
Confidence 8664
No 213
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.96 E-value=2.5e-05 Score=75.61 Aligned_cols=91 Identities=25% Similarity=0.269 Sum_probs=70.4
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
-+|+|||||+.|+-+|..|++.|.+|+++|+.+... . ++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l------------~---~~-------------------------- 182 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL------------G---LD-------------------------- 182 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCT------------T---CC--------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeec------------c---CC--------------------------
Confidence 479999999999999999999999999999876310 0 00
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGA 209 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~ 209 (462)
..+.+.+.+.+++.|++++.++ |.+++ .. .|.+.+| . +.+|.||.|.|.
T Consensus 183 ------------~~~~~~l~~~l~~~gV~i~~~~~v~~i~-----~~--~v~~~~g----------~-i~~D~vi~a~G~ 232 (367)
T 1xhc_A 183 ------------EELSNMIKDMLEETGVKFFLNSELLEAN-----EE--GVLTNSG----------F-IEGKVKICAIGI 232 (367)
T ss_dssp ------------HHHHHHHHHHHHHTTEEEECSCCEEEEC-----SS--EEEETTE----------E-EECSCEEEECCE
T ss_pred ------------HHHHHHHHHHHHHCCCEEEcCCEEEEEE-----ee--EEEECCC----------E-EEcCEEEECcCC
Confidence 1355667777888999999987 88776 11 3556555 5 999999999997
Q ss_pred ChH
Q 012488 210 NSR 212 (462)
Q Consensus 210 ~S~ 212 (462)
.+.
T Consensus 233 ~p~ 235 (367)
T 1xhc_A 233 VPN 235 (367)
T ss_dssp EEC
T ss_pred CcC
Confidence 654
No 214
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.95 E-value=7.2e-05 Score=70.57 Aligned_cols=100 Identities=20% Similarity=0.177 Sum_probs=71.7
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
-+|+|||+|+.|+-+|..|++.|.+|+++++.+... ..
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~----------------~~-------------------------- 183 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR----------------AE-------------------------- 183 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC----------------CC--------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc----------------cC--------------------------
Confidence 479999999999999999999999999999875210 00
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCC-CceeEEEecEEEecCC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGV-GEKRTLEVDAVIGADG 208 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~adlvI~AdG 208 (462)
..+.+.+.+.+++.|++++.++ +.++.. +.+....|.+.+. .+ ++..++.+|.||.|.|
T Consensus 184 ------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~~~~v~~v~~~~~-----~~~g~~~~i~~D~vv~a~G 244 (320)
T 1trb_A 184 ------------KILIKRLMDKVENGNIILHTNRTLEEVTG--DQMGVTGVRLRDT-----QNSDNIESLDVAGLFVAIG 244 (320)
T ss_dssp ------------HHHHHHHHHHHHTSSEEEECSCEEEEEEE--CSSSEEEEEEECC-----TTCCCCEEEECSEEEECSC
T ss_pred ------------HHHHHHHHHhcccCCeEEEcCceeEEEEc--CCCceEEEEEEec-----cCCCceEEEEcCEEEEEeC
Confidence 1234456667778899999887 888873 2222223666552 11 3346899999999999
Q ss_pred CCh
Q 012488 209 ANS 211 (462)
Q Consensus 209 ~~S 211 (462)
...
T Consensus 245 ~~p 247 (320)
T 1trb_A 245 HSP 247 (320)
T ss_dssp EEE
T ss_pred CCC
Confidence 654
No 215
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.95 E-value=4.9e-05 Score=76.08 Aligned_cols=97 Identities=19% Similarity=0.207 Sum_probs=73.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||+.|+-+|..|++.|.+|+++|+.+... . + +
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l------------~-~--~------------------------- 215 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF------------R-E--D------------------------- 215 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT------------T-S--C-------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC------------C-C--C-------------------------
Confidence 3589999999999999999999999999999875210 0 0 0
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
..+.+.+.+.+++.|++++.++ |.++.. +++.+.|.+. + .++.+|.||.|.|
T Consensus 216 -------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~---~~~~~~v~~~-~----------~~i~aD~Vv~a~G 268 (467)
T 1zk7_A 216 -------------PAIGEAVTAAFRAEGIEVLEHTQASQVAH---MDGEFVLTTT-H----------GELRADKLLVATG 268 (467)
T ss_dssp -------------HHHHHHHHHHHHHTTCEEETTCCEEEEEE---ETTEEEEEET-T----------EEEEESEEEECSC
T ss_pred -------------HHHHHHHHHHHHhCCCEEEcCCEEEEEEE---eCCEEEEEEC-C----------cEEEcCEEEECCC
Confidence 2345667777888999999987 888872 2333455543 2 5799999999999
Q ss_pred CChHh
Q 012488 209 ANSRV 213 (462)
Q Consensus 209 ~~S~v 213 (462)
..+..
T Consensus 269 ~~p~~ 273 (467)
T 1zk7_A 269 RTPNT 273 (467)
T ss_dssp EEESC
T ss_pred CCcCC
Confidence 87753
No 216
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.95 E-value=6.4e-06 Score=82.85 Aligned_cols=38 Identities=29% Similarity=0.339 Sum_probs=33.6
Q ss_pred CCCCCccEEEECCchHHHHHHHHHHHCC-CcEEEEcCCC
Q 012488 46 LTNRNLRVAVIGGGPAGGAAAETLAKNG-VETFLIERKL 83 (462)
Q Consensus 46 ~~~~~~dVvIVGgG~aGl~~A~~L~~~g-~~v~v~E~~~ 83 (462)
|..+.+||+|||||++||++|+.|+++| .+|+|+|+++
T Consensus 5 ~~~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~ 43 (484)
T 4dsg_A 5 AELLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECND 43 (484)
T ss_dssp --CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSS
T ss_pred CcccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCC
Confidence 3445789999999999999999999998 7999999986
No 217
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.94 E-value=0.00012 Score=73.47 Aligned_cols=103 Identities=17% Similarity=0.214 Sum_probs=76.5
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||+.|+-+|..|++.|.+|+++++.... .. ++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l-------------~~--~d------------------------- 226 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVL-------------RG--FD------------------------- 226 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSS-------------TT--SC-------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCC-------------cc--cC-------------------------
Confidence 347999999999999999999999999999974210 00 00
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
..+.+.+.+.+++.|++++.+. |.+++. .+++.+.|.+.++. +++..++.+|.||.|.|
T Consensus 227 -------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~~~~~~~v~~~~~~-----~~~~~~~~~D~vi~a~G 286 (483)
T 3dgh_A 227 -------------QQMAELVAASMEERGIPFLRKTVPLSVEK--QDDGKLLVKYKNVE-----TGEESEDVYDTVLWAIG 286 (483)
T ss_dssp -------------HHHHHHHHHHHHHTTCCEEETEEEEEEEE--CTTSCEEEEEEETT-----TCCEEEEEESEEEECSC
T ss_pred -------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEE--cCCCcEEEEEecCC-----CCceeEEEcCEEEECcc
Confidence 1245666777788999999987 888873 33445778887751 24456899999999999
Q ss_pred CChH
Q 012488 209 ANSR 212 (462)
Q Consensus 209 ~~S~ 212 (462)
....
T Consensus 287 ~~p~ 290 (483)
T 3dgh_A 287 RKGL 290 (483)
T ss_dssp EEEC
T ss_pred cccC
Confidence 7543
No 218
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.94 E-value=3.1e-05 Score=77.83 Aligned_cols=101 Identities=22% Similarity=0.241 Sum_probs=73.1
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||+.|+-+|..|++.|.+|+++|+.+... .. ++.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l------------~~--~d~------------------------ 226 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL------------RK--FDE------------------------ 226 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC------------TT--SCH------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc------------cc--cCH------------------------
Confidence 3589999999999999999999999999999876310 00 001
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCC-CEEEEEeccCCccCCCCceeEEEecEEEecC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQ-PYVLYYTEYDGTKGGVGEKRTLEVDAVIGAD 207 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~adlvI~Ad 207 (462)
.+.+.+.+.+++.|++++.++ |.+++. ++++ .+.|.+.+| + .++.+|.||.|.
T Consensus 227 --------------~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~~~~~~~~v~~~~G--------~-~~i~~D~vv~a~ 281 (479)
T 2hqm_A 227 --------------CIQNTITDHYVKEGINVHKLSKIVKVEK--NVETDKLKIHMNDS--------K-SIDDVDELIWTI 281 (479)
T ss_dssp --------------HHHHHHHHHHHHHTCEEECSCCEEEEEE--CC-CCCEEEEETTS--------C-EEEEESEEEECS
T ss_pred --------------HHHHHHHHHHHhCCeEEEeCCEEEEEEE--cCCCcEEEEEECCC--------c-EEEEcCEEEECC
Confidence 133355666677799999997 988873 2222 366776554 1 479999999999
Q ss_pred CCChHh
Q 012488 208 GANSRV 213 (462)
Q Consensus 208 G~~S~v 213 (462)
|..+..
T Consensus 282 G~~p~~ 287 (479)
T 2hqm_A 282 GRKSHL 287 (479)
T ss_dssp CEEECC
T ss_pred CCCCcc
Confidence 976653
No 219
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.92 E-value=7.6e-05 Score=73.27 Aligned_cols=102 Identities=18% Similarity=0.195 Sum_probs=75.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||+.|+-+|..|++.|.+|+++|+.+.... .. +
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------~~-~-------------------------- 185 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMS------------RA-A-------------------------- 185 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST------------TT-S--------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc------------cc-c--------------------------
Confidence 35899999999999999999999999999998762100 00 0
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
-..+.+.+.+.+++.|++++.++ |.+++ + + .|.+.+| .++.+|.||.|.|
T Consensus 186 ------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~----~-~--~v~~~~g----------~~i~~D~vi~a~G 236 (408)
T 2gqw_A 186 ------------PATLADFVARYHAAQGVDLRFERSVTGSV----D-G--VVLLDDG----------TRIAADMVVVGIG 236 (408)
T ss_dssp ------------CHHHHHHHHHHHHHTTCEEEESCCEEEEE----T-T--EEEETTS----------CEEECSEEEECSC
T ss_pred ------------CHHHHHHHHHHHHHcCcEEEeCCEEEEEE----C-C--EEEECCC----------CEEEcCEEEECcC
Confidence 01244566777788999999987 88876 1 2 5666666 6899999999999
Q ss_pred CChH--hhhhhcC
Q 012488 209 ANSR--VAKSINA 219 (462)
Q Consensus 209 ~~S~--vr~~l~~ 219 (462)
.... +.+..+.
T Consensus 237 ~~p~~~l~~~~gl 249 (408)
T 2gqw_A 237 VLANDALARAAGL 249 (408)
T ss_dssp EEECCHHHHHHTC
T ss_pred CCccHHHHHhCCC
Confidence 8653 3444443
No 220
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.91 E-value=5.9e-06 Score=79.99 Aligned_cols=33 Identities=24% Similarity=0.419 Sum_probs=31.8
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+||+|||||++|+++|+.|++.|++|+|+|+++
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~ 34 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRN 34 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCC
Confidence 699999999999999999999999999999986
No 221
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.91 E-value=5.3e-05 Score=75.77 Aligned_cols=101 Identities=15% Similarity=0.161 Sum_probs=73.7
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+... .. ++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l------------~~--~~------------------------- 211 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL------------PN--ED------------------------- 211 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS------------TT--SC-------------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc------------cc--cC-------------------------
Confidence 3589999999999999999999999999999875210 00 00
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
..+.+.+.+.+++.|++++.++ |.++.. +++.+.+.+.+. |+..++.+|.||.|.|
T Consensus 212 -------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~---~~~~~~v~~~~~-------g~~~~~~~D~vv~a~G 268 (464)
T 2a8x_A 212 -------------ADVSKEIEKQFKKLGVTILTATKVESIAD---GGSQVTVTVTKD-------GVAQELKAEKVLQAIG 268 (464)
T ss_dssp -------------HHHHHHHHHHHHHHTCEEECSCEEEEEEE---CSSCEEEEEESS-------SCEEEEEESEEEECSC
T ss_pred -------------HHHHHHHHHHHHHcCCEEEeCcEEEEEEE---cCCeEEEEEEcC-------CceEEEEcCEEEECCC
Confidence 1233556666777899999987 888872 233466766521 3346799999999999
Q ss_pred CChH
Q 012488 209 ANSR 212 (462)
Q Consensus 209 ~~S~ 212 (462)
..+.
T Consensus 269 ~~p~ 272 (464)
T 2a8x_A 269 FAPN 272 (464)
T ss_dssp EEEC
T ss_pred CCcc
Confidence 7654
No 222
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.90 E-value=9.6e-05 Score=74.40 Aligned_cols=98 Identities=23% Similarity=0.219 Sum_probs=72.0
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+..... . ++
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-----------~--~~------------------------- 235 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG-----------Y--YD------------------------- 235 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-----------T--SC-------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh-----------H--HH-------------------------
Confidence 358999999999999999999999999999987631000 0 00
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
..+.+.+.+.+++.|++++.+. |.++.. ++....+.+ ++ .++.+|.||.|.|
T Consensus 236 -------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~---~~~v~~v~~-~g----------~~i~~D~Vi~a~G 288 (490)
T 2bc0_A 236 -------------RDLTDLMAKNMEEHGIQLAFGETVKEVAG---NGKVEKIIT-DK----------NEYDVDMVILAVG 288 (490)
T ss_dssp -------------HHHHHHHHHHHHTTTCEEEETCCEEEEEC---SSSCCEEEE-SS----------CEEECSEEEECCC
T ss_pred -------------HHHHHHHHHHHHhCCeEEEeCCEEEEEEc---CCcEEEEEE-CC----------cEEECCEEEECCC
Confidence 1245667777788899999987 888872 222223444 44 6899999999999
Q ss_pred CChH
Q 012488 209 ANSR 212 (462)
Q Consensus 209 ~~S~ 212 (462)
....
T Consensus 289 ~~p~ 292 (490)
T 2bc0_A 289 FRPN 292 (490)
T ss_dssp EEEC
T ss_pred CCcC
Confidence 7654
No 223
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.90 E-value=9.6e-06 Score=80.79 Aligned_cols=36 Identities=47% Similarity=0.612 Sum_probs=33.3
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
...+||+||||||||+++|..|++.|++|+|||+.+
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~ 155 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYD 155 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccC
Confidence 345799999999999999999999999999999986
No 224
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.88 E-value=1e-05 Score=77.38 Aligned_cols=33 Identities=45% Similarity=0.520 Sum_probs=31.8
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+||+|||||+||+.+|+.|++.|++|+|+|+++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 599999999999999999999999999999987
No 225
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.88 E-value=8.8e-05 Score=73.86 Aligned_cols=98 Identities=15% Similarity=0.206 Sum_probs=71.9
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
-+|+|||||+.|+-+|..|++.|.+|+++|+.+..... . ++
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----------~--~~-------------------------- 190 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK-----------Y--FD-------------------------- 190 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT-----------T--SC--------------------------
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh-----------h--hh--------------------------
Confidence 47999999999999999999999999999987621000 0 00
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGA 209 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~ 209 (462)
..+.+.+.+.+++.|++++.++ |.++.. +++.+.....+| .++.+|.||.|.|.
T Consensus 191 ------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~---~~~~v~~v~~~g----------~~i~~D~vv~a~G~ 245 (452)
T 2cdu_A 191 ------------KEFTDILAKDYEAHGVNLVLGSKVAAFEE---VDDEIITKTLDG----------KEIKSDIAILCIGF 245 (452)
T ss_dssp ------------HHHHHHHHHHHHHTTCEEEESSCEEEEEE---ETTEEEEEETTS----------CEEEESEEEECCCE
T ss_pred ------------hhHHHHHHHHHHHCCCEEEcCCeeEEEEc---CCCeEEEEEeCC----------CEEECCEEEECcCC
Confidence 1255667777888999999987 888872 123343222244 68999999999998
Q ss_pred ChH
Q 012488 210 NSR 212 (462)
Q Consensus 210 ~S~ 212 (462)
...
T Consensus 246 ~p~ 248 (452)
T 2cdu_A 246 RPN 248 (452)
T ss_dssp EEC
T ss_pred CCC
Confidence 765
No 226
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.85 E-value=1.1e-05 Score=80.15 Aligned_cols=35 Identities=17% Similarity=0.341 Sum_probs=33.5
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.++||+|||+|++|+++|..|++.|++|+|+|+++
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~ 53 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLDRNP 53 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccC
Confidence 46899999999999999999999999999999987
No 227
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.85 E-value=0.00016 Score=72.43 Aligned_cols=101 Identities=18% Similarity=0.243 Sum_probs=76.2
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||+.|+-+|..|++.|.+|+++|+.+... .. .
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l------------~~--~-------------------------- 219 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL------------PA--V-------------------------- 219 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS------------TT--S--------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC------------cc--c--------------------------
Confidence 4589999999999999999999999999999875210 00 0
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
-..+.+.+.+.+++.|++++.+. |.+++. +++.+.+.+.+++ + ..++.+|.||.|.|
T Consensus 220 ------------~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~---~~~~~~v~~~~~~------g-~~~~~~D~vi~a~G 277 (476)
T 3lad_A 220 ------------DEQVAKEAQKILTKQGLKILLGARVTGTEV---KNKQVTVKFVDAE------G-EKSQAFDKLIVAVG 277 (476)
T ss_dssp ------------CHHHHHHHHHHHHHTTEEEEETCEEEEEEE---CSSCEEEEEESSS------E-EEEEEESEEEECSC
T ss_pred ------------CHHHHHHHHHHHHhCCCEEEECCEEEEEEE---cCCEEEEEEEeCC------C-cEEEECCEEEEeeC
Confidence 01255666777788899999887 888873 3445778777641 2 36899999999999
Q ss_pred CChH
Q 012488 209 ANSR 212 (462)
Q Consensus 209 ~~S~ 212 (462)
....
T Consensus 278 ~~p~ 281 (476)
T 3lad_A 278 RRPV 281 (476)
T ss_dssp EEEC
T ss_pred Cccc
Confidence 7553
No 228
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.84 E-value=1.5e-05 Score=81.56 Aligned_cols=36 Identities=31% Similarity=0.526 Sum_probs=33.5
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..++|+||||+|++|+++|..|++.|++|+|+|++.
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~ 40 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGG 40 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 356899999999999999999999999999999987
No 229
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.83 E-value=1.1e-05 Score=81.41 Aligned_cols=36 Identities=31% Similarity=0.386 Sum_probs=33.4
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..++||+|||||++||++|+.|+++|++|+|+|+++
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~ 66 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE 66 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 346799999999999999999999999999999986
No 230
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.83 E-value=0.00014 Score=72.37 Aligned_cols=97 Identities=22% Similarity=0.204 Sum_probs=72.8
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
-+|+|||||..|+-+|..|++.|.+|+++|+.+... ... +
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l------------~~~-~--------------------------- 187 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLL------------PKY-F--------------------------- 187 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS------------TTT-C---------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccc------------ccc-C---------------------------
Confidence 579999999999999999999999999999876210 000 0
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGA 209 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~ 209 (462)
-..+.+.+.+.+++.|++++.++ |.++.. .++.+.|.+.+ .++.+|.||.|.|.
T Consensus 188 -----------d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~---~~~~v~v~~~~-----------g~i~aD~Vv~A~G~ 242 (452)
T 3oc4_A 188 -----------DKEMVAEVQKSLEKQAVIFHFEETVLGIEE---TANGIVLETSE-----------QEISCDSGIFALNL 242 (452)
T ss_dssp -----------CHHHHHHHHHHHHTTTEEEEETCCEEEEEE---CSSCEEEEESS-----------CEEEESEEEECSCC
T ss_pred -----------CHHHHHHHHHHHHHcCCEEEeCCEEEEEEc---cCCeEEEEECC-----------CEEEeCEEEECcCC
Confidence 01255667777888899999887 888872 33445565532 27999999999998
Q ss_pred ChH
Q 012488 210 NSR 212 (462)
Q Consensus 210 ~S~ 212 (462)
...
T Consensus 243 ~p~ 245 (452)
T 3oc4_A 243 HPQ 245 (452)
T ss_dssp BCC
T ss_pred CCC
Confidence 764
No 231
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.83 E-value=1.2e-05 Score=78.18 Aligned_cols=34 Identities=21% Similarity=0.513 Sum_probs=32.2
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
++||+|||||++|+++|..|++.|++|+|+|+++
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~ 36 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRD 36 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 3699999999999999999999999999999986
No 232
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.82 E-value=0.00026 Score=71.22 Aligned_cols=103 Identities=17% Similarity=0.199 Sum_probs=74.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||+.|+-+|..|++.|.+|+++++.... .. ++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l-------------~~--~d------------------------- 224 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPL-------------RG--FD------------------------- 224 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS-------------TT--SC-------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccc-------------cc--CC-------------------------
Confidence 347999999999999999999999999999975310 00 00
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
..+.+.+.+.+++.|++++.+. +.++.. .+++.+.+.+.+.+ .++..++.+|.||.|.|
T Consensus 225 -------------~~~~~~l~~~l~~~gv~~~~~~~v~~i~~--~~~~~~~v~~~~~~-----~g~~~~~~~D~vi~a~G 284 (488)
T 3dgz_A 225 -------------QQMSSLVTEHMESHGTQFLKGCVPSHIKK--LPTNQLQVTWEDHA-----SGKEDTGTFDTVLWAIG 284 (488)
T ss_dssp -------------HHHHHHHHHHHHHTTCEEEETEEEEEEEE--CTTSCEEEEEEETT-----TTEEEEEEESEEEECSC
T ss_pred -------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEE--cCCCcEEEEEEeCC-----CCeeEEEECCEEEEccc
Confidence 1245666777788899999987 888872 23445777776631 13334689999999999
Q ss_pred CChH
Q 012488 209 ANSR 212 (462)
Q Consensus 209 ~~S~ 212 (462)
....
T Consensus 285 ~~p~ 288 (488)
T 3dgz_A 285 RVPE 288 (488)
T ss_dssp EEES
T ss_pred CCcc
Confidence 6543
No 233
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.81 E-value=1.7e-05 Score=78.65 Aligned_cols=35 Identities=20% Similarity=0.341 Sum_probs=33.2
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+++||+|||||++|+++|..|+++|++|+|+|+++
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~ 39 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNP 39 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 46899999999999999999999999999999986
No 234
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.80 E-value=0.00013 Score=69.22 Aligned_cols=96 Identities=25% Similarity=0.287 Sum_probs=69.4
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+....
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------------------------------------------- 210 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------------------------------------------- 210 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-------------------------------------------
Confidence 4799999999999999999999999999998752100
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHHC-CCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEKN-GASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~~-gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
.+.+.+.+.+. |++++.++ +.++.. +.+....|.+.+. .+++..++.+|.||.|.|
T Consensus 211 ---------------~~~~~~~l~~~~gv~i~~~~~v~~i~~--~~~~~~~v~~~~~-----~~g~~~~i~~D~vi~a~G 268 (338)
T 3itj_A 211 ---------------STIMQKRAEKNEKIEILYNTVALEAKG--DGKLLNALRIKNT-----KKNEETDLPVSGLFYAIG 268 (338)
T ss_dssp ---------------CHHHHHHHHHCTTEEEECSEEEEEEEE--SSSSEEEEEEEET-----TTTEEEEEECSEEEECSC
T ss_pred ---------------CHHHHHHHHhcCCeEEeecceeEEEEc--ccCcEEEEEEEEC-----CCCceEEEEeCEEEEEeC
Confidence 12234445454 99999887 888873 2222233677662 124457899999999999
Q ss_pred CCh
Q 012488 209 ANS 211 (462)
Q Consensus 209 ~~S 211 (462)
...
T Consensus 269 ~~p 271 (338)
T 3itj_A 269 HTP 271 (338)
T ss_dssp EEE
T ss_pred CCC
Confidence 643
No 235
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.78 E-value=1.1e-05 Score=81.97 Aligned_cols=35 Identities=31% Similarity=0.514 Sum_probs=32.3
Q ss_pred CCccEEEECCchHHHHHHHHHHH-CCCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAK-NGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~-~g~~v~v~E~~~ 83 (462)
.+||+||||||+||+.+|..|++ .|++|+|+|+++
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~ 51 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGE 51 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSB
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCC
Confidence 47999999999999999999998 689999999986
No 236
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.76 E-value=0.00014 Score=72.72 Aligned_cols=98 Identities=18% Similarity=0.162 Sum_probs=73.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
..+|+|||||+.|+-+|..|++.|.+|+++++.+... .. ++
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l------------~~--~~------------------------- 210 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL------------SR--FD------------------------- 210 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS------------TT--SC-------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc------------cc--cC-------------------------
Confidence 4589999999999999999999999999999875210 00 00
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEE-EeccCCccCCCCceeEEEecEEEecC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLY-YTEYDGTKGGVGEKRTLEVDAVIGAD 207 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~adlvI~Ad 207 (462)
..+.+.+.+.+++.|++++.++ |.++.. ++++.+.|. +.+| . +.+|.||.|.
T Consensus 211 -------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~~~~~~~v~~~~~g----------~-i~aD~Vv~a~ 264 (463)
T 4dna_A 211 -------------QDMRRGLHAAMEEKGIRILCEDIIQSVSA--DADGRRVATTMKHG----------E-IVADQVMLAL 264 (463)
T ss_dssp -------------HHHHHHHHHHHHHTTCEEECSCCEEEEEE--CTTSCEEEEESSSC----------E-EEESEEEECS
T ss_pred -------------HHHHHHHHHHHHHCCCEEECCCEEEEEEE--cCCCEEEEEEcCCC----------e-EEeCEEEEee
Confidence 1245667777888999999987 988873 223335666 5554 5 9999999999
Q ss_pred CCChH
Q 012488 208 GANSR 212 (462)
Q Consensus 208 G~~S~ 212 (462)
|..+.
T Consensus 265 G~~p~ 269 (463)
T 4dna_A 265 GRMPN 269 (463)
T ss_dssp CEEES
T ss_pred CcccC
Confidence 97654
No 237
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.76 E-value=2e-05 Score=82.81 Aligned_cols=36 Identities=36% Similarity=0.554 Sum_probs=33.4
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..++||+||||||+|+++|+.|+++|++|+|||+++
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~ 424 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGR 424 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 345799999999999999999999999999999976
No 238
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.69 E-value=0.00027 Score=70.88 Aligned_cols=103 Identities=17% Similarity=0.120 Sum_probs=73.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||+.|+-+|..|++.|.+|+++++.+... .. .+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l------------~~--~d------------------------- 227 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL------------RS--FD------------------------- 227 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC------------TT--SC-------------------------
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc------------cc--cC-------------------------
Confidence 4589999999999999999999999999999875210 00 00
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCC-CEEEEEeccCCccCCCCc--eeEEEecEEEe
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQ-PYVLYYTEYDGTKGGVGE--KRTLEVDAVIG 205 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~--~~~~~adlvI~ 205 (462)
..+.+.+.+.+++.|++++.+. |.+++. .+++ .+.+.+.+.+ +++ +.++.+|.||.
T Consensus 228 -------------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~--~~~~~~~~v~~~~~~-----~g~~~g~~~~~D~vi~ 287 (478)
T 3dk9_A 228 -------------SMISTNCTEELENAGVEVLKFSQVKEVKK--TLSGLEVSMVTAVPG-----RLPVMTMIPDVDCLLW 287 (478)
T ss_dssp -------------HHHHHHHHHHHHHTTCEEETTEEEEEEEE--CSSSEEEEEEECCTT-----SCCEEEEEEEESEEEE
T ss_pred -------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEE--cCCCcEEEEEEccCC-----CCcccceEEEcCEEEE
Confidence 1134556677778899999987 888873 2223 3556665521 122 26899999999
Q ss_pred cCCCCh
Q 012488 206 ADGANS 211 (462)
Q Consensus 206 AdG~~S 211 (462)
|.|...
T Consensus 288 a~G~~p 293 (478)
T 3dk9_A 288 AIGRVP 293 (478)
T ss_dssp CSCEEE
T ss_pred eecccc
Confidence 999654
No 239
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.67 E-value=3.2e-05 Score=81.81 Aligned_cols=36 Identities=28% Similarity=0.502 Sum_probs=33.3
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
...+||+||||||||+++|..|+++|++|+|||+.+
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~ 422 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAE 422 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 345799999999999999999999999999999976
No 240
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.67 E-value=0.00019 Score=72.20 Aligned_cols=104 Identities=24% Similarity=0.400 Sum_probs=74.6
Q ss_pred ccEEEECCchHHHHHHHHHHH----CCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEe
Q 012488 51 LRVAVIGGGPAGGAAAETLAK----NGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVD 126 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~----~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 126 (462)
-+|+|||||+.|+-+|..|++ .|.+|+++++.+.. .+ +. ++
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~---~~---------~~-l~---------------------- 225 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGN---MG---------KI-LP---------------------- 225 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSST---TT---------TT-SC----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccc---cc---------cc-CC----------------------
Confidence 479999999999999999986 47899999876421 00 00 00
Q ss_pred ccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEe
Q 012488 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIG 205 (462)
Q Consensus 127 ~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~ 205 (462)
..+.+.+.+.+++.|++++.++ |..+.. +++.+.|.+.+| .++.||+||.
T Consensus 226 ----------------~~~~~~~~~~l~~~GV~v~~~~~V~~i~~---~~~~~~v~l~dG----------~~i~aD~Vv~ 276 (493)
T 1m6i_A 226 ----------------EYLSNWTMEKVRREGVKVMPNAIVQSVGV---SSGKLLIKLKDG----------RKVETDHIVA 276 (493)
T ss_dssp ----------------HHHHHHHHHHHHTTTCEEECSCCEEEEEE---ETTEEEEEETTS----------CEEEESEEEE
T ss_pred ----------------HHHHHHHHHHHHhcCCEEEeCCEEEEEEe---cCCeEEEEECCC----------CEEECCEEEE
Confidence 1244566677788899999997 888872 233456777776 6899999999
Q ss_pred cCCCChH--hhhhhc
Q 012488 206 ADGANSR--VAKSIN 218 (462)
Q Consensus 206 AdG~~S~--vr~~l~ 218 (462)
|.|..+. +.+..+
T Consensus 277 a~G~~pn~~l~~~~g 291 (493)
T 1m6i_A 277 AVGLEPNVELAKTGG 291 (493)
T ss_dssp CCCEEECCTTHHHHT
T ss_pred CCCCCccHHHHHHcC
Confidence 9998764 344444
No 241
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.66 E-value=0.00036 Score=65.35 Aligned_cols=95 Identities=23% Similarity=0.197 Sum_probs=67.9
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
-+|+|||+|+.|+-+|..|++.|.+|+++++.+... . +
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~----------------~-~------------------------- 182 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK----------------A-D------------------------- 182 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC----------------S-C-------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC----------------c-c-------------------------
Confidence 479999999999999999999999999999875210 0 0
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHH-CCCEEEcce-eEEEEecCCCCCCE-EEEEeccCCccCCCCceeEEEecEEEecC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEK-NGASVINGL-FMKMDLPRNFEQPY-VLYYTEYDGTKGGVGEKRTLEVDAVIGAD 207 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~-~gv~i~~~~-v~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~adlvI~Ad 207 (462)
+.+.+.+++ .|++++.+. +.++.. +++.+ .|.+.++ .+++..++.+|.||.|.
T Consensus 183 ----------------~~~~~~l~~~~gv~v~~~~~v~~i~~---~~~~v~~v~~~~~-----~~g~~~~i~~D~vi~a~ 238 (310)
T 1fl2_A 183 ----------------QVLQDKLRSLKNVDIILNAQTTEVKG---DGSKVVGLEYRDR-----VSGDIHNIELAGIFVQI 238 (310)
T ss_dssp ----------------HHHHHHHHTCTTEEEESSEEEEEEEE---SSSSEEEEEEEET-----TTCCEEEEECSEEEECS
T ss_pred ----------------HHHHHHHhhCCCeEEecCCceEEEEc---CCCcEEEEEEEEC-----CCCcEEEEEcCEEEEee
Confidence 022334445 589999887 888872 22333 5666653 12445689999999999
Q ss_pred CCCh
Q 012488 208 GANS 211 (462)
Q Consensus 208 G~~S 211 (462)
|...
T Consensus 239 G~~p 242 (310)
T 1fl2_A 239 GLLP 242 (310)
T ss_dssp CEEE
T ss_pred CCcc
Confidence 9543
No 242
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.64 E-value=0.00016 Score=74.63 Aligned_cols=95 Identities=21% Similarity=0.266 Sum_probs=72.2
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
.+|+|||||+.|+-+|..|++.|.+|+++|+.+.... . +
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------~--~--------------------------- 226 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMP------------P--I--------------------------- 226 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT------------T--S---------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccc------------c--C---------------------------
Confidence 4799999999999999999999999999998752100 0 0
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGA 209 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~ 209 (462)
-..+.+.+.+.+++.|++++.+. |.++.. .++ .|.+.+| .++.+|.||.|.|.
T Consensus 227 -----------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~---~~~--~v~~~~g----------~~i~~D~Vi~a~G~ 280 (588)
T 3ics_A 227 -----------DYEMAAYVHEHMKNHDVELVFEDGVDALEE---NGA--VVRLKSG----------SVIQTDMLILAIGV 280 (588)
T ss_dssp -----------CHHHHHHHHHHHHHTTCEEECSCCEEEEEG---GGT--EEEETTS----------CEEECSEEEECSCE
T ss_pred -----------CHHHHHHHHHHHHHcCCEEEECCeEEEEec---CCC--EEEECCC----------CEEEcCEEEEccCC
Confidence 01235566777788899999887 888872 122 3566665 68999999999998
Q ss_pred ChH
Q 012488 210 NSR 212 (462)
Q Consensus 210 ~S~ 212 (462)
.+.
T Consensus 281 ~p~ 283 (588)
T 3ics_A 281 QPE 283 (588)
T ss_dssp EEC
T ss_pred CCC
Confidence 654
No 243
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.63 E-value=0.00037 Score=69.27 Aligned_cols=96 Identities=24% Similarity=0.236 Sum_probs=69.8
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
-+|+|||||+.|+-+|..|++.|.+|+++|+.+.... .. ++
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------~~-~~-------------------------- 189 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLR------------RS-FD-------------------------- 189 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT------------TT-SC--------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch------------hh-cC--------------------------
Confidence 3899999999999999999999999999998762100 00 00
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGA 209 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~ 209 (462)
..+.+.+.+.+++. ++++.+. +..+.. .+ .+.....++ .++.+|.||.|.|.
T Consensus 190 ------------~~~~~~l~~~l~~~-v~i~~~~~v~~i~~---~~-~v~~v~~~g----------~~i~~D~Vv~a~G~ 242 (449)
T 3kd9_A 190 ------------KEVTDILEEKLKKH-VNLRLQEITMKIEG---EE-RVEKVVTDA----------GEYKAELVILATGI 242 (449)
T ss_dssp ------------HHHHHHHHHHHTTT-SEEEESCCEEEEEC---SS-SCCEEEETT----------EEEECSEEEECSCE
T ss_pred ------------HHHHHHHHHHHHhC-cEEEeCCeEEEEec---cC-cEEEEEeCC----------CEEECCEEEEeeCC
Confidence 23556666677777 9999887 888872 22 333334455 68999999999998
Q ss_pred ChH
Q 012488 210 NSR 212 (462)
Q Consensus 210 ~S~ 212 (462)
...
T Consensus 243 ~p~ 245 (449)
T 3kd9_A 243 KPN 245 (449)
T ss_dssp EEC
T ss_pred ccC
Confidence 643
No 244
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.62 E-value=0.00026 Score=70.14 Aligned_cols=92 Identities=15% Similarity=0.161 Sum_probs=69.6
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+... ..+ +
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll------------~~~--d-------------------------- 187 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKIN------------KLM--D-------------------------- 187 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCS------------TTS--C--------------------------
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeecccc------------ccc--c--------------------------
Confidence 479999999999999999999999999999875310 000 0
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGA 209 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~ 209 (462)
..+.+.+.+..++.|++++.+. |..++ + ..+.+.++ +++.+|.||.|.|.
T Consensus 188 ------------~~~~~~~~~~l~~~gV~i~~~~~v~~~~-----~--~~v~~~~g----------~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 188 ------------ADMNQPILDELDKREIPYRLNEEINAIN-----G--NEITFKSG----------KVEHYDMIIEGVGT 238 (437)
T ss_dssp ------------GGGGHHHHHHHHHTTCCEEESCCEEEEE-----T--TEEEETTS----------CEEECSEEEECCCE
T ss_pred ------------chhHHHHHHHhhccceEEEeccEEEEec-----C--CeeeecCC----------eEEeeeeEEEEece
Confidence 0123455666778899999887 87776 1 24666776 78999999999997
Q ss_pred Ch
Q 012488 210 NS 211 (462)
Q Consensus 210 ~S 211 (462)
..
T Consensus 239 ~P 240 (437)
T 4eqs_A 239 HP 240 (437)
T ss_dssp EE
T ss_pred ec
Confidence 55
No 245
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.62 E-value=4e-05 Score=76.82 Aligned_cols=35 Identities=31% Similarity=0.526 Sum_probs=31.7
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCC-cEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGV-ETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~~ 83 (462)
.++||+|||||++|+++|+.|++.|+ +|+|+|+++
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~ 38 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATD 38 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCC
Confidence 35799999999999999999999999 899999986
No 246
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.61 E-value=0.00031 Score=71.24 Aligned_cols=102 Identities=14% Similarity=0.169 Sum_probs=76.5
Q ss_pred CCCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEe
Q 012488 47 TNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVD 126 (462)
Q Consensus 47 ~~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 126 (462)
...+-+++|||||+.|+=+|..+++.|.+|+|+++.... .. .+
T Consensus 220 ~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L-------------~~--~D---------------------- 262 (542)
T 4b1b_A 220 KKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL-------------RG--FD---------------------- 262 (542)
T ss_dssp SSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS-------------TT--SC----------------------
T ss_pred ccCCceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc-------------cc--cc----------------------
Confidence 344558999999999999999999999999999874310 00 00
Q ss_pred ccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEe
Q 012488 127 IGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIG 205 (462)
Q Consensus 127 ~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~ 205 (462)
.++.+.+.+..++.|++++.+. +..+. ..++.+.|.+.++ .++.+|.|+.
T Consensus 263 ----------------~ei~~~l~~~l~~~gi~~~~~~~v~~~~---~~~~~~~v~~~~~----------~~~~~D~vLv 313 (542)
T 4b1b_A 263 ----------------QQCAVKVKLYMEEQGVMFKNGILPKKLT---KMDDKILVEFSDK----------TSELYDTVLY 313 (542)
T ss_dssp ----------------HHHHHHHHHHHHHTTCEEEETCCEEEEE---EETTEEEEEETTS----------CEEEESEEEE
T ss_pred ----------------hhHHHHHHHHHHhhcceeecceEEEEEE---ecCCeEEEEEcCC----------CeEEEEEEEE
Confidence 1244556677788899999888 88777 2345577777766 6788999999
Q ss_pred cCCCChHhh
Q 012488 206 ADGANSRVA 214 (462)
Q Consensus 206 AdG~~S~vr 214 (462)
|.|+...+-
T Consensus 314 AvGR~Pnt~ 322 (542)
T 4b1b_A 314 AIGRKGDID 322 (542)
T ss_dssp CSCEEESCG
T ss_pred cccccCCcc
Confidence 999877653
No 247
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.60 E-value=4.4e-05 Score=80.04 Aligned_cols=36 Identities=33% Similarity=0.427 Sum_probs=33.3
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
...+||+||||||||+.+|..|++.|++|+|||+.+
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~ 406 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHS 406 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 345799999999999999999999999999999986
No 248
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.59 E-value=3.5e-05 Score=78.81 Aligned_cols=37 Identities=30% Similarity=0.601 Sum_probs=33.7
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCC-CcEEEEcCCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNG-VETFLIERKLD 84 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g-~~v~v~E~~~~ 84 (462)
..+||+||||||.|||++|..|++.| .+|+|+|+.+.
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 35699999999999999999999987 79999999874
No 249
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.59 E-value=5.7e-05 Score=78.97 Aligned_cols=36 Identities=33% Similarity=0.489 Sum_probs=33.4
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
...+||+|||||++||++|+.|++.|++|+|+|+.+
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~ 140 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARD 140 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 345799999999999999999999999999999986
No 250
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.58 E-value=2.8e-05 Score=79.10 Aligned_cols=34 Identities=26% Similarity=0.505 Sum_probs=32.3
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.+||+||||||+||+.+|..|++ |.+|+|+|+++
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~ 58 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGS 58 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSB
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCC
Confidence 46999999999999999999999 99999999986
No 251
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.57 E-value=0.0002 Score=68.89 Aligned_cols=99 Identities=18% Similarity=0.107 Sum_probs=68.3
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
-+|+|||+|+.|+-+|..|++.|.+|+++++.+.... . +
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~---------------~-~------------------------- 202 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG---------------H-G------------------------- 202 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS---------------C-S-------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC---------------C-H-------------------------
Confidence 4799999999999999999999999999998752100 0 0
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGA 209 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~ 209 (462)
.+.+.|.+..++.|++++.++ +.++.. +++....|.+... .|+..++.+|.||.|.|.
T Consensus 203 -------------~~~~~l~~~~~~~gv~i~~~~~v~~i~~--~~~~v~~v~~~~~------~g~~~~i~~D~vi~a~G~ 261 (360)
T 3ab1_A 203 -------------KTAHEVERARANGTIDVYLETEVASIEE--SNGVLTRVHLRSS------DGSKWTVEADRLLILIGF 261 (360)
T ss_dssp -------------HHHHSSHHHHHHTSEEEESSEEEEEEEE--ETTEEEEEEEEET------TCCEEEEECSEEEECCCB
T ss_pred -------------HHHHHHHHHhhcCceEEEcCcCHHHhcc--CCCceEEEEEEec------CCCeEEEeCCEEEECCCC
Confidence 011234445567799999997 888873 2222124555411 134468999999999996
Q ss_pred Ch
Q 012488 210 NS 211 (462)
Q Consensus 210 ~S 211 (462)
..
T Consensus 262 ~p 263 (360)
T 3ab1_A 262 KS 263 (360)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 252
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.57 E-value=0.00046 Score=64.98 Aligned_cols=96 Identities=21% Similarity=0.204 Sum_probs=66.8
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
-+|+|||||+.|+-+|..|++.|.+|+++++.+... ..
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~----------------~~-------------------------- 193 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM----------------CE-------------------------- 193 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC----------------SC--------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC----------------CC--------------------------
Confidence 479999999999999999999999999999865210 00
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGA 209 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~ 209 (462)
..+.+.+++.|++++.++ +.++.. +++....+.+.+. .+|+..++.+|.||.|.|.
T Consensus 194 ----------------~~l~~~l~~~gv~i~~~~~v~~i~~--~~~~v~~v~~~~~-----~~g~~~~i~~D~vi~a~G~ 250 (319)
T 3cty_A 194 ----------------NAYVQEIKKRNIPYIMNAQVTEIVG--DGKKVTGVKYKDR-----TTGEEKLIETDGVFIYVGL 250 (319)
T ss_dssp ----------------HHHHHHHHHTTCCEECSEEEEEEEE--SSSSEEEEEEEET-----TTCCEEEECCSEEEECCCE
T ss_pred ----------------HHHHHHHhcCCcEEEcCCeEEEEec--CCceEEEEEEEEc-----CCCceEEEecCEEEEeeCC
Confidence 113344457799999887 888873 2221234555521 0133457999999999995
Q ss_pred Ch
Q 012488 210 NS 211 (462)
Q Consensus 210 ~S 211 (462)
.+
T Consensus 251 ~p 252 (319)
T 3cty_A 251 IP 252 (319)
T ss_dssp EE
T ss_pred cc
Confidence 44
No 253
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.57 E-value=6.2e-05 Score=77.40 Aligned_cols=37 Identities=22% Similarity=0.460 Sum_probs=34.2
Q ss_pred CCCCccEEEECCchHHHHHHHHHHH-CCCcEEEEcCCC
Q 012488 47 TNRNLRVAVIGGGPAGGAAAETLAK-NGVETFLIERKL 83 (462)
Q Consensus 47 ~~~~~dVvIVGgG~aGl~~A~~L~~-~g~~v~v~E~~~ 83 (462)
...++|++|||+|++|+++|..|++ .|++|+|+|++.
T Consensus 21 ~~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~ 58 (587)
T 1gpe_A 21 AGKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGF 58 (587)
T ss_dssp TTCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSC
T ss_pred CcccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 3457999999999999999999999 799999999987
No 254
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.55 E-value=0.00058 Score=63.98 Aligned_cols=96 Identities=22% Similarity=0.182 Sum_probs=65.4
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+... ..
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~----------------~~-------------------------- 181 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR----------------CA-------------------------- 181 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC----------------SC--------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC----------------CC--------------------------
Confidence 589999999999999999999999999999875210 00
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHH-HCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAE-KNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~-~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
..+.+.+. +.|++++.+. +.++.. +++....|.+.+. ..|+..++.+|.||.|.|
T Consensus 182 ----------------~~~~~~l~~~~gv~v~~~~~v~~i~~--~~~~v~~v~~~~~-----~~g~~~~i~~D~vi~a~G 238 (311)
T 2q0l_A 182 ----------------PITLEHAKNNDKIEFLTPYVVEEIKG--DASGVSSLSIKNT-----ATNEKRELVVPGFFIFVG 238 (311)
T ss_dssp ----------------HHHHHHHHTCTTEEEETTEEEEEEEE--ETTEEEEEEEEET-----TTCCEEEEECSEEEECSC
T ss_pred ----------------HHHHHHHhhCCCeEEEeCCEEEEEEC--CCCcEeEEEEEec-----CCCceEEEecCEEEEEec
Confidence 01222333 3689999887 888872 2122124555531 013345899999999999
Q ss_pred CCh
Q 012488 209 ANS 211 (462)
Q Consensus 209 ~~S 211 (462)
...
T Consensus 239 ~~p 241 (311)
T 2q0l_A 239 YDV 241 (311)
T ss_dssp EEE
T ss_pred Ccc
Confidence 543
No 255
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.54 E-value=0.00042 Score=65.74 Aligned_cols=99 Identities=22% Similarity=0.151 Sum_probs=70.0
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
-+|+|||+|..|+-+|..|++.|.+|+++++.+... ..+
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~----------------~~~------------------------- 191 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFR----------------AHE------------------------- 191 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCC----------------SCH-------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccC----------------ccH-------------------------
Confidence 489999999999999999999999999999875210 000
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGA 209 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~ 209 (462)
.+.+.|.+.+++.|++++.+. +.++.. ++....|.+.+. ..|+..++.+|.||.|.|.
T Consensus 192 -------------~~~~~l~~~l~~~gv~v~~~~~v~~i~~---~~~~~~v~~~~~-----~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2zbw_A 192 -------------ASVKELMKAHEEGRLEVLTPYELRRVEG---DERVRWAVVFHN-----QTQEELALEVDAVLILAGY 250 (335)
T ss_dssp -------------HHHHHHHHHHHTTSSEEETTEEEEEEEE---SSSEEEEEEEET-----TTCCEEEEECSEEEECCCE
T ss_pred -------------HHHHHHHhccccCCeEEecCCcceeEcc---CCCeeEEEEEEC-----CCCceEEEecCEEEEeecC
Confidence 112345556677899999997 888873 223235666521 0134468999999999996
Q ss_pred Ch
Q 012488 210 NS 211 (462)
Q Consensus 210 ~S 211 (462)
.+
T Consensus 251 ~p 252 (335)
T 2zbw_A 251 IT 252 (335)
T ss_dssp EE
T ss_pred CC
Confidence 54
No 256
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.53 E-value=7.3e-05 Score=79.71 Aligned_cols=35 Identities=34% Similarity=0.495 Sum_probs=32.9
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
...||+|||||++||++|+.|+++|++|+|||+.+
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~ 311 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARD 311 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 45799999999999999999999999999999986
No 257
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.51 E-value=5.7e-05 Score=77.28 Aligned_cols=37 Identities=27% Similarity=0.487 Sum_probs=33.6
Q ss_pred CCCCccEEEECCchHHHHHHHHHHHC-CCcEEEEcCCC
Q 012488 47 TNRNLRVAVIGGGPAGGAAAETLAKN-GVETFLIERKL 83 (462)
Q Consensus 47 ~~~~~dVvIVGgG~aGl~~A~~L~~~-g~~v~v~E~~~ 83 (462)
...+||+||||||.|||++|..|++. +++|+|+|+.+
T Consensus 16 ~~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 16 SGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TTCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 34579999999999999999999974 89999999987
No 258
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.47 E-value=5.6e-05 Score=75.26 Aligned_cols=34 Identities=26% Similarity=0.360 Sum_probs=31.9
Q ss_pred CccEEEECCchHHHHHHHHHHH-C------CCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAK-N------GVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~-~------g~~v~v~E~~~ 83 (462)
++||+||||||||+.+|..|++ . |++|+|||+.+
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~ 43 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLP 43 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCC
Confidence 4699999999999999999999 7 99999999986
No 259
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.47 E-value=0.00014 Score=72.48 Aligned_cols=143 Identities=17% Similarity=0.169 Sum_probs=74.7
Q ss_pred CccEEEECCchHHHHHHHHHHHC--CCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEec
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKN--GVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDI 127 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~--g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (462)
..+|+|||||..|+=+|..|++. |.+|++++|.+.........+..+.+ ....... +.. . +......+
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~-----~p~~~~~-~~~---l-~~~~~~~~ 296 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVF-----APKFTDL-IYS---R-EHAERERL 296 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGG-----SHHHHHH-HHH---S-CHHHHHHH
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhcc-----ChhHHHH-Hhc---C-CHHHHHHH
Confidence 45899999999999999999998 99999999987421110000000000 0000000 000 0 00000000
Q ss_pred cCcccCCCeEEeeeh----HHHHHHHHHHHHH-CCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEec
Q 012488 128 GQTLKPHEYIGMVRR----EVLDAYLRERAEK-NGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVD 201 (462)
Q Consensus 128 ~~~~~~~~~~~~v~r----~~l~~~L~~~~~~-~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ad 201 (462)
-.......+. .++- ..+..+..+.... .|++++.++ |+.+.. +++.+.|++.+. .+|+..++.+|
T Consensus 297 ~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~---~~~~~~v~~~~~-----~~g~~~~~~~D 367 (463)
T 3s5w_A 297 LREYHNTNYS-VVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATA---TAQGIELALRDA-----GSGELSVETYD 367 (463)
T ss_dssp HHHTGGGTSS-CBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEE---ETTEEEEEEEET-----TTCCEEEEEES
T ss_pred HHHhhccCCC-cCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEe---cCCEEEEEEEEc-----CCCCeEEEECC
Confidence 0000000000 1111 1222333333333 589999998 888873 344577877743 12455679999
Q ss_pred EEEecCCCCh
Q 012488 202 AVIGADGANS 211 (462)
Q Consensus 202 lvI~AdG~~S 211 (462)
+||.|+|...
T Consensus 368 ~Vv~AtG~~p 377 (463)
T 3s5w_A 368 AVILATGYER 377 (463)
T ss_dssp EEEECCCEEC
T ss_pred EEEEeeCCCC
Confidence 9999999643
No 260
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.47 E-value=0.00073 Score=63.77 Aligned_cols=95 Identities=23% Similarity=0.152 Sum_probs=69.2
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+... ..+..
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~----------------~~~~~----------------------- 195 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFR----------------AHEHS----------------------- 195 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCS----------------SCHHH-----------------------
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCC----------------ccHHH-----------------------
Confidence 479999999999999999999999999999875210 00000
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGA 209 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~ 209 (462)
.+.+++.|++++.+. +..+.. +++...|.+.++ .+++..++.+|.||.|.|.
T Consensus 196 -------------------~~~l~~~gv~~~~~~~v~~i~~---~~~~~~v~~~~~-----~~g~~~~~~~D~vv~a~G~ 248 (332)
T 3lzw_A 196 -------------------VENLHASKVNVLTPFVPAELIG---EDKIEQLVLEEV-----KGDRKEILEIDDLIVNYGF 248 (332)
T ss_dssp -------------------HHHHHHSSCEEETTEEEEEEEC---SSSCCEEEEEET-----TSCCEEEEECSEEEECCCE
T ss_pred -------------------HHHHhcCCeEEEeCceeeEEec---CCceEEEEEEec-----CCCceEEEECCEEEEeecc
Confidence 123467899999987 888872 233456777764 2345578999999999995
Q ss_pred Ch
Q 012488 210 NS 211 (462)
Q Consensus 210 ~S 211 (462)
..
T Consensus 249 ~p 250 (332)
T 3lzw_A 249 VS 250 (332)
T ss_dssp EC
T ss_pred CC
Confidence 43
No 261
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.46 E-value=7.1e-05 Score=74.63 Aligned_cols=35 Identities=31% Similarity=0.517 Sum_probs=32.1
Q ss_pred CCccEEEECCchHHHHHHHHHHHCC--CcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNG--VETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g--~~v~v~E~~~ 83 (462)
.++||+||||||+|+.+|..|++.| ++|+|||+.+
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~ 41 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQL 41 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 3579999999999999999999998 9999999986
No 262
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.46 E-value=0.0014 Score=66.43 Aligned_cols=104 Identities=16% Similarity=0.132 Sum_probs=70.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||+.|+-+|..|++.|.+|+|+++.... .. ++
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l-------------~~--~d------------------------- 249 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILL-------------RG--FD------------------------- 249 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS-------------TT--SC-------------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEeccccc-------------cc--CC-------------------------
Confidence 347999999999999999999999999999974210 00 00
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCC-CCCCEEEEEeccCCccCCCCceeEEEecEEEecC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRN-FEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGAD 207 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~Ad 207 (462)
..+.+.+.+.+++.|++++.+. +..+..... ..+.+.+.+...+ .++..++.+|.||.|.
T Consensus 250 -------------~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~-----g~~~~~~~~D~vi~a~ 311 (519)
T 3qfa_A 250 -------------QDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTN-----SEEIIEGEYNTVMLAI 311 (519)
T ss_dssp -------------HHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESS-----SSCEEEEEESEEEECS
T ss_pred -------------HHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECC-----CcEEEEEECCEEEEec
Confidence 1244566677788899999886 666653111 1234556554321 1233577899999999
Q ss_pred CCCh
Q 012488 208 GANS 211 (462)
Q Consensus 208 G~~S 211 (462)
|...
T Consensus 312 G~~p 315 (519)
T 3qfa_A 312 GRDA 315 (519)
T ss_dssp CEEE
T ss_pred CCcc
Confidence 9654
No 263
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.45 E-value=0.00062 Score=64.44 Aligned_cols=96 Identities=22% Similarity=0.216 Sum_probs=66.6
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
-+|+|||+|..|+-+|..|++.|.+|+++++.+... ..
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~----------------~~-------------------------- 197 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR----------------AS-------------------------- 197 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC----------------SC--------------------------
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC----------------cc--------------------------
Confidence 489999999999999999999999999999875310 00
Q ss_pred ccCCCeEEeeehHHHHHHHH-HHHHHCCCEEEcce-eEEEEecCCCCC-CE-EEEEeccCCccCCCCceeEEEecEEEec
Q 012488 131 LKPHEYIGMVRREVLDAYLR-ERAEKNGASVINGL-FMKMDLPRNFEQ-PY-VLYYTEYDGTKGGVGEKRTLEVDAVIGA 206 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~-~~~~~~gv~i~~~~-v~~~~~~~~~~~-~~-~v~~~~~~~~~~~~~~~~~~~adlvI~A 206 (462)
+.+. +..++.|++++.+. +.++.. +.++ .+ .|.+.+. .+++..++.+|.||.|
T Consensus 198 ----------------~~~~~~~~~~~gv~i~~~~~v~~i~~--~~~~~~v~~v~~~~~-----~~g~~~~i~~D~vi~a 254 (333)
T 1vdc_A 198 ----------------KIMQQRALSNPKIDVIWNSSVVEAYG--DGERDVLGGLKVKNV-----VTGDVSDLKVSGLFFA 254 (333)
T ss_dssp ----------------HHHHHHHHTCTTEEEECSEEEEEEEE--SSSSSSEEEEEEEET-----TTCCEEEEECSEEEEC
T ss_pred ----------------HHHHHHHHhCCCeeEecCCceEEEeC--CCCccceeeEEEEec-----CCCceEEEecCEEEEE
Confidence 1112 22245789999887 888873 2210 33 3666542 1244578999999999
Q ss_pred CCCCh
Q 012488 207 DGANS 211 (462)
Q Consensus 207 dG~~S 211 (462)
.|...
T Consensus 255 ~G~~p 259 (333)
T 1vdc_A 255 IGHEP 259 (333)
T ss_dssp SCEEE
T ss_pred eCCcc
Confidence 99543
No 264
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.44 E-value=0.00038 Score=64.61 Aligned_cols=85 Identities=15% Similarity=0.123 Sum_probs=64.2
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
..+|+|||+|+.|+-+|..|++.| +|+++++.+.
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~--------------------------------------------- 174 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV--------------------------------------------- 174 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC---------------------------------------------
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC---------------------------------------------
Confidence 358999999999999999999999 9999987542
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcceeEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGA 209 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~ 209 (462)
.+.+.+.+.+++.|++++...|.++.. ++ .|.+.+| .++.+|.||.|.|.
T Consensus 175 --------------~~~~~~~~~l~~~gv~i~~~~v~~i~~----~~--~v~~~~g----------~~~~~D~vi~a~G~ 224 (297)
T 3fbs_A 175 --------------EPDADQHALLAARGVRVETTRIREIAG----HA--DVVLADG----------RSIALAGLFTQPKL 224 (297)
T ss_dssp --------------CCCHHHHHHHHHTTCEEECSCEEEEET----TE--EEEETTS----------CEEEESEEEECCEE
T ss_pred --------------CCCHHHHHHHHHCCcEEEcceeeeeec----CC--eEEeCCC----------CEEEEEEEEEccCc
Confidence 001223455667899998744888872 11 6677776 68999999999995
Q ss_pred C
Q 012488 210 N 210 (462)
Q Consensus 210 ~ 210 (462)
.
T Consensus 225 ~ 225 (297)
T 3fbs_A 225 R 225 (297)
T ss_dssp E
T ss_pred c
Confidence 4
No 265
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.43 E-value=0.0011 Score=62.61 Aligned_cols=95 Identities=22% Similarity=0.133 Sum_probs=65.6
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
-+|+|||+|+.|+-+|..|++.|.+|+++++.+... ..
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~----------------~~-------------------------- 190 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR----------------AN-------------------------- 190 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC----------------SC--------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC----------------cc--------------------------
Confidence 479999999999999999999999999999875210 00
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHH-CCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEK-NGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~-~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
..+.+++.+ .|++++.+. +.++.. ++....|.+.+. .+|+..++.+|.||.|.|
T Consensus 191 ----------------~~~~~~l~~~~gv~i~~~~~v~~i~~---~~~v~~v~~~~~-----~~g~~~~i~~D~vi~a~G 246 (325)
T 2q7v_A 191 ----------------KVAQARAFANPKMKFIWDTAVEEIQG---ADSVSGVKLRNL-----KTGEVSELATDGVFIFIG 246 (325)
T ss_dssp ----------------HHHHHHHHTCTTEEEECSEEEEEEEE---SSSEEEEEEEET-----TTCCEEEEECSEEEECSC
T ss_pred ----------------hHHHHHHHhcCCceEecCCceEEEcc---CCcEEEEEEEEC-----CCCcEEEEEcCEEEEccC
Confidence 012223333 589999887 888873 222235666531 013445899999999999
Q ss_pred CCh
Q 012488 209 ANS 211 (462)
Q Consensus 209 ~~S 211 (462)
...
T Consensus 247 ~~p 249 (325)
T 2q7v_A 247 HVP 249 (325)
T ss_dssp EEE
T ss_pred CCC
Confidence 543
No 266
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.42 E-value=0.00051 Score=66.04 Aligned_cols=104 Identities=21% Similarity=0.268 Sum_probs=68.7
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
-+|+|||||+.|+-+|..|++.|.+|+++++.+..... . .++. .
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~-----------~-----------------~d~~-----~--- 210 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDP-----------D-----------------ADPS-----V--- 210 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC--------------------------------------CT-----T---
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCC-----------C-----------------CCCC-----c---
Confidence 47999999999999999999999999999987521100 0 0000 0
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHHCC-CEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEE-ecEEEecC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEKNG-ASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLE-VDAVIGAD 207 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~~g-v~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-adlvI~Ad 207 (462)
. . ...+.+.+.+..++.| ++++.+. |.++.. +++.+.|.+.+| .++. +|.||.|+
T Consensus 211 -~-------~-~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~---~~~~~~v~~~~g----------~~~~~~d~vi~a~ 268 (369)
T 3d1c_A 211 -R-------L-SPYTRQRLGNVIKQGARIEMNVHYTVKDIDF---NNGQYHISFDSG----------QSVHTPHEPILAT 268 (369)
T ss_dssp -S-------C-CHHHHHHHHHHHHTTCCEEEECSCCEEEEEE---ETTEEEEEESSS----------CCEEESSCCEECC
T ss_pred -c-------C-CHHHHHHHHHHHhhCCcEEEecCcEEEEEEe---cCCceEEEecCC----------eEeccCCceEEee
Confidence 0 0 0224455666667786 9999887 888852 233466777776 3454 69999999
Q ss_pred CCChH
Q 012488 208 GANSR 212 (462)
Q Consensus 208 G~~S~ 212 (462)
|....
T Consensus 269 G~~~~ 273 (369)
T 3d1c_A 269 GFDAT 273 (369)
T ss_dssp CBCGG
T ss_pred ccCCc
Confidence 97654
No 267
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.42 E-value=9.2e-05 Score=81.19 Aligned_cols=34 Identities=29% Similarity=0.534 Sum_probs=32.0
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGV-ETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~~ 83 (462)
.+||+||||||||+++|..|++.|+ +|+|||+.+
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~ 221 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQE 221 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 5799999999999999999999999 799999975
No 268
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.41 E-value=9.3e-05 Score=75.46 Aligned_cols=38 Identities=37% Similarity=0.623 Sum_probs=34.7
Q ss_pred CCCCCccEEEECCchHHHHHHHHHHHC-CCcEEEEcCCC
Q 012488 46 LTNRNLRVAVIGGGPAGGAAAETLAKN-GVETFLIERKL 83 (462)
Q Consensus 46 ~~~~~~dVvIVGgG~aGl~~A~~L~~~-g~~v~v~E~~~ 83 (462)
|..+.+|++|||+|++|+++|..|++. |.+|+|+|++.
T Consensus 9 ~~~~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~ 47 (546)
T 2jbv_A 9 LSDREFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGP 47 (546)
T ss_dssp CCCCEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSC
T ss_pred cccCcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCC
Confidence 344679999999999999999999998 99999999987
No 269
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.40 E-value=0.00014 Score=73.49 Aligned_cols=36 Identities=31% Similarity=0.436 Sum_probs=33.8
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..++|++|||+|++|+.+|..|++.|.+|+|+|++.
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 44 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGR 44 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCC
Confidence 356899999999999999999999999999999986
No 270
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.40 E-value=7.2e-05 Score=77.75 Aligned_cols=36 Identities=31% Similarity=0.497 Sum_probs=32.9
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCC--------CcEEEEcCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNG--------VETFLIERKL 83 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g--------~~v~v~E~~~ 83 (462)
....+|+|||||++||++|+.|++.| ++|+|||+++
T Consensus 54 ~~~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 54 AGNYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADP 97 (721)
T ss_dssp SSEEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccC
Confidence 34579999999999999999999998 9999999986
No 271
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.39 E-value=0.00011 Score=74.13 Aligned_cols=35 Identities=29% Similarity=0.416 Sum_probs=33.3
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.++|++|||+|++|+++|..|++.|++|+|+|++.
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 38 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQ 38 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 46899999999999999999999999999999987
No 272
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.38 E-value=6.5e-05 Score=76.68 Aligned_cols=34 Identities=26% Similarity=0.519 Sum_probs=32.2
Q ss_pred CccEEEECCchHHHHHHHHHHH-CCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAK-NGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~-~g~~v~v~E~~~ 83 (462)
+||+||||||+||+.+|..|++ .|++|+|+|+.+
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~ 36 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGV 36 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCC
Confidence 5899999999999999999998 699999999986
No 273
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.35 E-value=0.00091 Score=63.46 Aligned_cols=96 Identities=21% Similarity=0.217 Sum_probs=65.2
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+... . .
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~----------------~-----------------~--------- 193 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR----------------A-----------------S--------- 193 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS----------------S-----------------C---------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC----------------c-----------------c---------
Confidence 589999999999999999999999999999875210 0 0
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGA 209 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~ 209 (462)
. .+.+ +..++.|++++.+. +.++.. +++...+.+.+. .+|+..++.+|.||.|.|.
T Consensus 194 ----~--------~~~~---~~~~~~gV~v~~~~~v~~i~~---~~~~~~v~~~~~-----~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2a87_A 194 ----K--------IMLD---RARNNDKIRFLTNHTVVAVDG---DTTVTGLRVRDT-----NTGAETTLPVTGVFVAIGH 250 (335)
T ss_dssp ----T--------THHH---HHHHCTTEEEECSEEEEEEEC---SSSCCEEEEEEE-----TTSCCEEECCSCEEECSCE
T ss_pred ----H--------HHHH---HHhccCCcEEEeCceeEEEec---CCcEeEEEEEEc-----CCCceEEeecCEEEEccCC
Confidence 0 0111 11235789999887 888872 222233555432 1134468999999999995
Q ss_pred Ch
Q 012488 210 NS 211 (462)
Q Consensus 210 ~S 211 (462)
..
T Consensus 251 ~p 252 (335)
T 2a87_A 251 EP 252 (335)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 274
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.34 E-value=0.00074 Score=63.18 Aligned_cols=95 Identities=20% Similarity=0.145 Sum_probs=65.3
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+... . .
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~----------------~-~------------------------- 185 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR----------------A-A------------------------- 185 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB----------------S-C-------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC----------------C-C-------------------------
Confidence 479999999999999999999999999999875210 0 0
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGA 209 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~ 209 (462)
...+.+..++.|++++.+. +.++.. +.+....|.+... .|+..++.+|.||.|.|.
T Consensus 186 ---------------~~~~~~~~~~~gv~~~~~~~v~~i~~--~~~~~~~v~~~~~------~g~~~~~~~D~vv~a~G~ 242 (315)
T 3r9u_A 186 ---------------PSTVEKVKKNEKIELITSASVDEVYG--DKMGVAGVKVKLK------DGSIRDLNVPGIFTFVGL 242 (315)
T ss_dssp ---------------HHHHHHHHHCTTEEEECSCEEEEEEE--ETTEEEEEEEECT------TSCEEEECCSCEEECSCE
T ss_pred ---------------HHHHHHHHhcCCeEEEeCcEEEEEEc--CCCcEEEEEEEcC------CCCeEEeecCeEEEEEcC
Confidence 0112222346789999877 888873 2222223555411 144458999999999995
Q ss_pred C
Q 012488 210 N 210 (462)
Q Consensus 210 ~ 210 (462)
.
T Consensus 243 ~ 243 (315)
T 3r9u_A 243 N 243 (315)
T ss_dssp E
T ss_pred C
Confidence 4
No 275
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.34 E-value=0.0002 Score=69.61 Aligned_cols=85 Identities=18% Similarity=0.230 Sum_probs=63.2
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
-+|+|||||+.|+-+|..|++.|.+|+|+|+.+..... .+ +
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~-----------~~--~-------------------------- 187 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLER-----------QL--D-------------------------- 187 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT-----------TS--C--------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh-----------hc--C--------------------------
Confidence 47999999999999999999999999999988621000 00 0
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGA 209 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~ 209 (462)
..+.+.+.+..++.|++++.+. +..+ + .++.+|+||.|.|.
T Consensus 188 ------------~~~~~~~~~~l~~~gV~~~~~~~v~~i----------------g----------~~~~~D~vv~a~G~ 229 (385)
T 3klj_A 188 ------------RDGGLFLKDKLDRLGIKIYTNSNFEEM----------------G----------DLIRSSCVITAVGV 229 (385)
T ss_dssp ------------HHHHHHHHHHHHTTTCEEECSCCGGGC----------------H----------HHHHHSEEEECCCE
T ss_pred ------------HHHHHHHHHHHHhCCCEEEeCCEEEEc----------------C----------eEEecCeEEECcCc
Confidence 2244556677778899998875 4332 3 67889999999997
Q ss_pred ChH
Q 012488 210 NSR 212 (462)
Q Consensus 210 ~S~ 212 (462)
...
T Consensus 230 ~p~ 232 (385)
T 3klj_A 230 KPN 232 (385)
T ss_dssp EEC
T ss_pred ccC
Confidence 653
No 276
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.27 E-value=0.0013 Score=61.64 Aligned_cols=95 Identities=22% Similarity=0.214 Sum_probs=67.1
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.... .+
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~----------------~~------------------------- 193 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA----------------QP------------------------- 193 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS----------------CH-------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc----------------CH-------------------------
Confidence 4899999999999999999999999999998752100 00
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHH-HCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAE-KNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~-~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
. +.+++. +.|++++.++ +.++.. ++....|.+.+. .+|+..++.+|.||.|.|
T Consensus 194 ----------------~-~~~~~~~~~gv~~~~~~~v~~i~~---~~~~~~v~~~~~-----~~g~~~~~~~D~vv~a~G 248 (323)
T 3f8d_A 194 ----------------I-YVETVKKKPNVEFVLNSVVKEIKG---DKVVKQVVVENL-----KTGEIKELNVNGVFIEIG 248 (323)
T ss_dssp ----------------H-HHHHHHTCTTEEEECSEEEEEEEE---SSSEEEEEEEET-----TTCCEEEEECSEEEECCC
T ss_pred ----------------H-HHHHHHhCCCcEEEeCCEEEEEec---cCceeEEEEEEC-----CCCceEEEEcCEEEEEEC
Confidence 1 112333 3489999988 888873 233345666651 123445899999999999
Q ss_pred CCh
Q 012488 209 ANS 211 (462)
Q Consensus 209 ~~S 211 (462)
...
T Consensus 249 ~~p 251 (323)
T 3f8d_A 249 FDP 251 (323)
T ss_dssp EEC
T ss_pred CCC
Confidence 654
No 277
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.27 E-value=0.001 Score=66.29 Aligned_cols=101 Identities=18% Similarity=0.178 Sum_probs=67.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQ 129 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (462)
.-+|+|||||+.|+-+|..|++.|.+|+++++.+.... .+ ++
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------~~-~d------------------------- 213 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALI------------TL-ED------------------------- 213 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT------------TS-CC-------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCC------------CC-CC-------------------------
Confidence 45899999999999999999999999999998762100 00 00
Q ss_pred cccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 130 TLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 130 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
..+.+.+.+..+ ++++.+. |.++.. .+++.+.+.+.+. .|+..++.+|.||.|.|
T Consensus 214 -------------~~~~~~l~~~l~---v~i~~~~~v~~i~~--~~~~~v~v~~~~~------~G~~~~i~~D~vi~a~G 269 (466)
T 3l8k_A 214 -------------QDIVNTLLSILK---LNIKFNSPVTEVKK--IKDDEYEVIYSTK------DGSKKSIFTNSVVLAAG 269 (466)
T ss_dssp -------------HHHHHHHHHHHC---CCEECSCCEEEEEE--EETTEEEEEECCT------TSCCEEEEESCEEECCC
T ss_pred -------------HHHHHHHHhcCE---EEEEECCEEEEEEE--cCCCcEEEEEEec------CCceEEEEcCEEEECcC
Confidence 112233333222 7888876 888872 2214566777621 13335899999999999
Q ss_pred CChH
Q 012488 209 ANSR 212 (462)
Q Consensus 209 ~~S~ 212 (462)
....
T Consensus 270 ~~p~ 273 (466)
T 3l8k_A 270 RRPV 273 (466)
T ss_dssp EEEC
T ss_pred CCcc
Confidence 7654
No 278
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.26 E-value=0.0033 Score=64.84 Aligned_cols=103 Identities=17% Similarity=0.093 Sum_probs=67.2
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
-+|+|||||..|+-+|..|++.|.+|+|+++.. .. .. ++
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~l------------~~--~d-------------------------- 325 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRSI-LL------------RG--FD-------------------------- 325 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-SS------------TT--SC--------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECCc-Cc------------Cc--CC--------------------------
Confidence 379999999999999999999999999999762 10 00 00
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEec------CCCCCCEEEEEeccCCccCCCCceeEEEecEE
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLP------RNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAV 203 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~------~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlv 203 (462)
..+.+.+.+.+++.|++++.+. +..+... ....+.+.+.+... .|+..++.+|.|
T Consensus 326 ------------~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~------~g~~~~~~~D~v 387 (598)
T 2x8g_A 326 ------------QQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYT------DGKKFEEEFETV 387 (598)
T ss_dssp ------------HHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEET------TSCEEEEEESEE
T ss_pred ------------HHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeC------CCcEEeccCCEE
Confidence 1123445556677899999886 6666421 11113344543211 133344569999
Q ss_pred EecCCCChH
Q 012488 204 IGADGANSR 212 (462)
Q Consensus 204 I~AdG~~S~ 212 (462)
|.|.|....
T Consensus 388 i~a~G~~p~ 396 (598)
T 2x8g_A 388 IFAVGREPQ 396 (598)
T ss_dssp EECSCEEEC
T ss_pred EEEeCCccc
Confidence 999997654
No 279
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.20 E-value=0.0019 Score=67.75 Aligned_cols=97 Identities=21% Similarity=0.159 Sum_probs=68.4
Q ss_pred ccEEEEC--CchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEecc
Q 012488 51 LRVAVIG--GGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG 128 (462)
Q Consensus 51 ~dVvIVG--gG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (462)
-+|+||| ||..|+-+|..|++.|.+|+++++.+... .....
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~------------------~~~~~------------------- 566 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVS------------------SWTNN------------------- 566 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTT------------------GGGGG-------------------
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccc------------------ccccc-------------------
Confidence 4699999 99999999999999999999999875210 00000
Q ss_pred CcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecC
Q 012488 129 QTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGAD 207 (462)
Q Consensus 129 ~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~Ad 207 (462)
..+...+.+.+++.|++++.++ |+++. . +.+.+.... ++++.++.+|.||.|.
T Consensus 567 --------------~~~~~~l~~~l~~~GV~i~~~~~V~~i~----~-~~~~v~~~~-------~~~~~~i~aD~VV~A~ 620 (690)
T 3k30_A 567 --------------TFEVNRIQRRLIENGVARVTDHAVVAVG----A-GGVTVRDTY-------ASIERELECDAVVMVT 620 (690)
T ss_dssp --------------GTCHHHHHHHHHHTTCEEEESEEEEEEE----T-TEEEEEETT-------TCCEEEEECSEEEEES
T ss_pred --------------chhHHHHHHHHHHCCCEEEcCcEEEEEE----C-CeEEEEEcc-------CCeEEEEECCEEEECC
Confidence 0023456667778899999997 88887 1 224443321 2344789999999999
Q ss_pred CCC
Q 012488 208 GAN 210 (462)
Q Consensus 208 G~~ 210 (462)
|..
T Consensus 621 G~~ 623 (690)
T 3k30_A 621 ARL 623 (690)
T ss_dssp CEE
T ss_pred CCC
Confidence 953
No 280
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.20 E-value=0.002 Score=65.18 Aligned_cols=94 Identities=22% Similarity=0.189 Sum_probs=67.3
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
-+|+|||||..|+-+|..|++.|.+|+++++.+... . +
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~----------------~-~------------------------- 393 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK----------------A-D------------------------- 393 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC----------------S-C-------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC----------------c-C-------------------------
Confidence 489999999999999999999999999999865210 0 0
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHH-CCCEEEcce-eEEEEecCCCCCCE-EEEEeccCCccCCCCceeEEEecEEEecC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEK-NGASVINGL-FMKMDLPRNFEQPY-VLYYTEYDGTKGGVGEKRTLEVDAVIGAD 207 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~-~gv~i~~~~-v~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~adlvI~Ad 207 (462)
..+.+.+++ .|++++.+. ++.+.. +++.+ .+.+.++ .+|+..++.+|.||.|.
T Consensus 394 ----------------~~l~~~l~~~~gV~v~~~~~v~~i~~---~~~~v~~v~~~~~-----~~g~~~~i~~D~vi~a~ 449 (521)
T 1hyu_A 394 ----------------QVLQDKVRSLKNVDIILNAQTTEVKG---DGSKVVGLEYRDR-----VSGDIHSVALAGIFVQI 449 (521)
T ss_dssp ----------------HHHHHHHTTCTTEEEECSEEEEEEEE---CSSSEEEEEEEET-----TTCCEEEEECSEEEECC
T ss_pred ----------------HHHHHHHhcCCCcEEEeCCEEEEEEc---CCCcEEEEEEEeC-----CCCceEEEEcCEEEECc
Confidence 123334444 589999887 888872 22334 4667653 13455689999999999
Q ss_pred CCC
Q 012488 208 GAN 210 (462)
Q Consensus 208 G~~ 210 (462)
|..
T Consensus 450 G~~ 452 (521)
T 1hyu_A 450 GLL 452 (521)
T ss_dssp CEE
T ss_pred CCC
Confidence 953
No 281
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.12 E-value=0.0018 Score=65.18 Aligned_cols=98 Identities=24% Similarity=0.299 Sum_probs=64.6
Q ss_pred cEEEECCchHHHHHHHHHHHCC--------------CcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEE
Q 012488 52 RVAVIGGGPAGGAAAETLAKNG--------------VETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKM 117 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g--------------~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~ 117 (462)
.++|||||+.|+=+|..|+..+ .+|+|+|..+...
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il------------------------------- 267 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL------------------------------- 267 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS-------------------------------
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc-------------------------------
Confidence 6999999999999999887532 4566666654210
Q ss_pred EcCCCceEeccCcccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCcee
Q 012488 118 ISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKR 196 (462)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 196 (462)
... -..+.+.+.+.+++.||+++.++ |.+++ ++.+.+.....+ ....+.
T Consensus 268 --------------~~~-------~~~~~~~~~~~L~~~GV~v~~~~~v~~v~-----~~~~~~~~~~~d----g~~~~~ 317 (502)
T 4g6h_A 268 --------------NMF-------EKKLSSYAQSHLENTSIKVHLRTAVAKVE-----EKQLLAKTKHED----GKITEE 317 (502)
T ss_dssp --------------TTS-------CHHHHHHHHHHHHHTTCEEETTEEEEEEC-----SSEEEEEEECTT----SCEEEE
T ss_pred --------------cCC-------CHHHHHHHHHHHHhcceeeecCceEEEEe-----CCceEEEEEecC----ccccee
Confidence 000 02355667777888999999998 88876 223444333211 011235
Q ss_pred EEEecEEEecCCCC
Q 012488 197 TLEVDAVIGADGAN 210 (462)
Q Consensus 197 ~~~adlvI~AdG~~ 210 (462)
++.+|+||.|.|..
T Consensus 318 ~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 318 TIPYGTLIWATGNK 331 (502)
T ss_dssp EEECSEEEECCCEE
T ss_pred eeccCEEEEccCCc
Confidence 79999999999963
No 282
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.06 E-value=0.00048 Score=70.67 Aligned_cols=36 Identities=19% Similarity=0.362 Sum_probs=34.4
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+++|||+|||+|+.|+.+|..|++.|.+|+++||++
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~ 41 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRS 41 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 458999999999999999999999999999999998
No 283
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.66 E-value=0.00027 Score=71.90 Aligned_cols=35 Identities=29% Similarity=0.345 Sum_probs=32.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD 84 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~ 84 (462)
..+|+|||+|..|+-+|..|++.|.+|+|++|.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 45899999999999999999999999999999874
No 284
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.63 E-value=0.00042 Score=70.54 Aligned_cols=35 Identities=29% Similarity=0.439 Sum_probs=32.5
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD 84 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~ 84 (462)
..+|+|||+|..|+-+|..|++.+.+|+|++|.+.
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 35899999999999999999999999999999873
No 285
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.61 E-value=0.0061 Score=60.67 Aligned_cols=34 Identities=12% Similarity=0.173 Sum_probs=31.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.-+|+|||||.+|+=+|..|++.|.+|+++++.+
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~ 230 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT 230 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC
Confidence 3589999999999999999999999999999875
No 286
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.47 E-value=0.0034 Score=62.19 Aligned_cols=33 Identities=15% Similarity=0.124 Sum_probs=30.9
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCc-EEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVE-TFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~-v~v~E~~~ 83 (462)
-+|+|||||.+|+=+|..|++.|.+ |+|+++.+
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 4799999999999999999999999 99999875
No 287
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.47 E-value=0.0064 Score=66.19 Aligned_cols=98 Identities=20% Similarity=0.242 Sum_probs=67.8
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCCCCCcccccCccccccCCCChhhHhcccceEEEEcCCCceEeccCc
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQT 130 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~~~~~g~~i~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (462)
-+|+|||+|+.|+-+|..|++.|.+|+|+|+.+... .
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~------------------~------------------------- 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS------------------A------------------------- 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC------------------H-------------------------
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc------------------h-------------------------
Confidence 479999999999999999999999999999875210 0
Q ss_pred ccCCCeEEeeehHHHHHHHHHHHHHCCCEEEcce-eEEEEecCC-CCCCEEEEEeccCCccCCCCceeEEEecEEEecCC
Q 012488 131 LKPHEYIGMVRREVLDAYLRERAEKNGASVINGL-FMKMDLPRN-FEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADG 208 (462)
Q Consensus 131 ~~~~~~~~~v~r~~l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG 208 (462)
. .+.+++.|++++.++ +.++.. + ++....|.+.+.+. ....|+..++.+|.||.|.|
T Consensus 322 -----------~-------~~~l~~~GV~v~~~~~v~~i~~--~~~~~v~~v~~~~~~~-~~~~G~~~~i~~D~Vv~a~G 380 (965)
T 2gag_A 322 -----------A-------AAQAVADGVQVISGSVVVDTEA--DENGELSAIVVAELDE-ARELGGTQRFEADVLAVAGG 380 (965)
T ss_dssp -----------H-------HHHHHHTTCCEEETEEEEEEEE--CTTSCEEEEEEEEECT-TCCEEEEEEEECSEEEEECC
T ss_pred -----------h-------HHHHHhCCeEEEeCCEeEEEec--cCCCCEEEEEEEeccc-cCCCCceEEEEcCEEEECCC
Confidence 0 134567899999998 888872 1 22222455554000 00013346899999999999
Q ss_pred CChH
Q 012488 209 ANSR 212 (462)
Q Consensus 209 ~~S~ 212 (462)
....
T Consensus 381 ~~P~ 384 (965)
T 2gag_A 381 FNPV 384 (965)
T ss_dssp EEEC
T ss_pred cCcC
Confidence 7654
No 288
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.43 E-value=0.0086 Score=59.46 Aligned_cols=34 Identities=18% Similarity=0.284 Sum_probs=30.4
Q ss_pred CccEEEECCchHHHHHHHHHH--------------------HCCC-cEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLA--------------------KNGV-ETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~--------------------~~g~-~v~v~E~~~ 83 (462)
.-+|+|||+|..|+-+|..|+ +.|. +|+|++|+.
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~ 199 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRG 199 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCC
Confidence 358999999999999999999 6788 699999886
No 289
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=96.38 E-value=0.02 Score=53.33 Aligned_cols=33 Identities=30% Similarity=0.455 Sum_probs=31.0
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.+|+|||||..|+-+|..|++.|.+|+|+|+..
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 479999999999999999999999999999865
No 290
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.37 E-value=0.0038 Score=50.93 Aligned_cols=35 Identities=20% Similarity=0.252 Sum_probs=32.5
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
++-.|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 34579999999999999999999999999999987
No 291
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.35 E-value=0.004 Score=51.79 Aligned_cols=34 Identities=15% Similarity=0.340 Sum_probs=31.8
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
...|+|+|+|..|+.+|..|.+.|++|+++|+++
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3589999999999999999999999999999976
No 292
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.29 E-value=0.0043 Score=50.26 Aligned_cols=33 Identities=24% Similarity=0.417 Sum_probs=31.0
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
++|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999875
No 293
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.25 E-value=0.013 Score=61.66 Aligned_cols=33 Identities=24% Similarity=0.218 Sum_probs=30.7
Q ss_pred ccEEEEC--CchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIG--GGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVG--gG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
-+|+||| ||..|+-+|..|++.|.+|+|+++.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 4899998 99999999999999999999999865
No 294
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.23 E-value=0.013 Score=58.11 Aligned_cols=34 Identities=29% Similarity=0.481 Sum_probs=29.6
Q ss_pred CccEEEECCchHHHHHHHHHHHC--------------------CC-cEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKN--------------------GV-ETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~--------------------g~-~v~v~E~~~ 83 (462)
.-+|+|||+|..|+-+|..|++. |. +|+|++|+.
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~ 201 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRG 201 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCC
Confidence 35899999999999999999874 64 899999886
No 295
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.11 E-value=0.006 Score=47.70 Aligned_cols=34 Identities=21% Similarity=0.376 Sum_probs=31.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCC-CcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNG-VETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g-~~v~v~E~~~ 83 (462)
...|+|+|+|..|..++..|.+.| ++|+++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 357999999999999999999999 9999999976
No 296
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.09 E-value=0.0056 Score=57.90 Aligned_cols=40 Identities=30% Similarity=0.434 Sum_probs=35.6
Q ss_pred CCCCCCCccEEEECCchHHHHHHHHHHHCCC-cEEEEcCCC
Q 012488 44 PKLTNRNLRVAVIGGGPAGGAAAETLAKNGV-ETFLIERKL 83 (462)
Q Consensus 44 ~~~~~~~~dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~~ 83 (462)
|.|..++++|+|||||-.|..+|..|++.|+ +|+++|++.
T Consensus 3 ~~~~~~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 3 PALVQRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCCCSCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred cCcCCCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 4466666799999999999999999999998 999999876
No 297
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.05 E-value=0.0059 Score=49.76 Aligned_cols=33 Identities=21% Similarity=0.356 Sum_probs=31.1
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 379999999999999999999999999999976
No 298
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=95.91 E-value=0.016 Score=57.44 Aligned_cols=34 Identities=24% Similarity=0.347 Sum_probs=30.7
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCc-EEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVE-TFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~-v~v~E~~~ 83 (462)
.-+|+|||||..|+-+|..+.+.|.+ |+++++++
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 45899999999999999999999984 99999875
No 299
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.81 E-value=0.012 Score=48.76 Aligned_cols=33 Identities=15% Similarity=0.042 Sum_probs=30.8
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 369999999999999999999999999999974
No 300
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.80 E-value=0.0098 Score=55.46 Aligned_cols=33 Identities=33% Similarity=0.527 Sum_probs=31.0
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.+|.|||+|..|...|..|+++|++|+++|+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999875
No 301
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=95.77 E-value=0.047 Score=56.97 Aligned_cols=52 Identities=25% Similarity=0.363 Sum_probs=36.4
Q ss_pred HHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCCCh
Q 012488 146 DAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANS 211 (462)
Q Consensus 146 ~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S 211 (462)
...+.+.+++.|++++.+. |..+. + +.+.+. .+ |+..++.+|.||.|.|...
T Consensus 576 ~~~~~~~l~~~GV~v~~~~~v~~i~----~-~~v~~~-~~--------G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 576 GWIHRTTLLSRGVKMIPGVSYQKID----D-DGLHVV-IN--------GETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEEE----T-TEEEEE-ET--------TEEEEECCSEEEECCCEEE
T ss_pred HHHHHHHHHhcCCEEEeCcEEEEEe----C-CeEEEe-cC--------CeEEEEeCCEEEECCCccc
Confidence 3455667778899999887 88876 1 234443 33 3346799999999999543
No 302
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=95.72 E-value=0.0085 Score=58.49 Aligned_cols=57 Identities=12% Similarity=0.179 Sum_probs=31.5
Q ss_pred cccccccccceeccccCCCCCCCCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 26 AQALPRQQKFRVSAAKTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+.-.|+.+|...|+....-......++|.|||.|-.|+.+|..|++ |++|+++|+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 12 SGLVPRGSHMASMTGGQQMGRGSEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp -----------------------CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCcccccchhhhccCCcccccccCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 3444566666666655444444445689999999999999999998 99999999986
No 303
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.67 E-value=0.01 Score=48.22 Aligned_cols=32 Identities=31% Similarity=0.478 Sum_probs=30.3
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999875
No 304
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.65 E-value=0.04 Score=60.39 Aligned_cols=32 Identities=31% Similarity=0.422 Sum_probs=30.1
Q ss_pred cEEEECCchHHHHHHHHHHHCCC-cEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGV-ETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~~ 83 (462)
+|+|||||..|+=+|..+++.|. +|+|+++.+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 89999999999999999999996 899999875
No 305
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.61 E-value=0.011 Score=55.69 Aligned_cols=34 Identities=32% Similarity=0.419 Sum_probs=31.1
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.++|.|||+|..|.++|..|++.|++|++++|++
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 3589999999999999999999999999999864
No 306
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.54 E-value=0.0093 Score=52.64 Aligned_cols=32 Identities=19% Similarity=0.321 Sum_probs=30.7
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 69999999999999999999999999999876
No 307
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=95.38 E-value=0.042 Score=51.96 Aligned_cols=32 Identities=34% Similarity=0.552 Sum_probs=29.6
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
-+|+|||+|..|+-+|..|++.| +|+++++..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 58999999999999999999998 799999875
No 308
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.38 E-value=0.013 Score=54.80 Aligned_cols=34 Identities=26% Similarity=0.503 Sum_probs=30.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.++|.|||+|-.|.++|..|++.|++|++++|++
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 3579999999999999999999999999999864
No 309
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.31 E-value=0.017 Score=55.11 Aligned_cols=39 Identities=26% Similarity=0.319 Sum_probs=33.1
Q ss_pred CCCCCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 45 KLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 45 ~~~~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+|+.+.++|.|||+|--|.++|..|++.|++|+++++++
T Consensus 24 ~m~~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 24 AMEPFKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp ---CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred cccccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 344455789999999999999999999999999999975
No 310
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=95.28 E-value=0.012 Score=54.86 Aligned_cols=33 Identities=27% Similarity=0.366 Sum_probs=31.1
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
-+|+|||||+.|+=+|..|++.|.+|+|+|+.+
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 178 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD 178 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeccc
Confidence 379999999999999999999999999999876
No 311
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=95.24 E-value=0.12 Score=50.63 Aligned_cols=56 Identities=11% Similarity=0.109 Sum_probs=36.1
Q ss_pred HHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCC
Q 012488 146 DAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGA 209 (462)
Q Consensus 146 ~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~ 209 (462)
...+.+.+++.|++++.+. |++++ ++.+.+...+.+ ..+.+..++.+|++|.|.|.
T Consensus 211 ~~~~~~~l~~~gI~~~~~~~v~~v~-----~~~v~~~~~~~~---g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 211 KGILTKGLKEEGIEAYTNCKVTKVE-----DNKMYVTQVDEK---GETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp HHHHHHHHHHTTCEEECSEEEEEEE-----TTEEEEEEECTT---SCEEEEEEEECSEEEEECCE
T ss_pred HHHHHHHHHHCCCEEEcCCEEEEEE-----CCeEEEEecccC---CccccceEEEEeEEEEcCCC
Confidence 3455666778899999988 88887 123444322210 11122478999999999884
No 312
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=95.24 E-value=0.07 Score=52.29 Aligned_cols=53 Identities=6% Similarity=0.116 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCCC
Q 012488 145 LDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGAN 210 (462)
Q Consensus 145 l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~ 210 (462)
+.+.+.+.+++.|++++.++ |++++ .+. +.+++. .+++.++.+|+||.|.|..
T Consensus 202 ~~~~l~~~l~~~GV~i~~~~~v~~v~-----~~~--v~~~~~------~~~g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 202 SKRLVEDLFAERNIDWIANVAVKAIE-----PDK--VIYEDL------NGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEEC-----SSE--EEEECT------TSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEe-----CCe--EEEEec------CCCceEEeeeEEEECCCCc
Confidence 34556677788999999887 88886 122 344441 1334789999999999854
No 313
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.23 E-value=0.019 Score=49.05 Aligned_cols=34 Identities=26% Similarity=0.355 Sum_probs=31.5
Q ss_pred CccEEEECCchHHHHHHHHHHHC-CCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKN-GVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~-g~~v~v~E~~~ 83 (462)
...|+|+|+|..|..+|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 34799999999999999999999 99999999976
No 314
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.01 E-value=0.019 Score=53.66 Aligned_cols=33 Identities=24% Similarity=0.289 Sum_probs=31.1
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
-+|.|||+|.-|...|..++.+|++|+++|..+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 379999999999999999999999999999875
No 315
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=94.88 E-value=0.017 Score=53.55 Aligned_cols=34 Identities=38% Similarity=0.457 Sum_probs=31.2
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.++|+|||+|-.|.++|..|++.|.+|++++|+.
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 4589999999999999999999999999999875
No 316
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.87 E-value=0.024 Score=55.89 Aligned_cols=33 Identities=30% Similarity=0.374 Sum_probs=31.5
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
++|.|||+|-.|+.+|..|+++|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 589999999999999999999999999999986
No 317
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.83 E-value=0.031 Score=51.45 Aligned_cols=32 Identities=25% Similarity=0.267 Sum_probs=30.7
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+|.|||+|..|...|..|+++|++|+++|+++
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 79999999999999999999999999999876
No 318
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=94.83 E-value=0.5 Score=46.73 Aligned_cols=39 Identities=26% Similarity=0.210 Sum_probs=31.8
Q ss_pred CCEEEEccCCcCcccCCcccHHHHHHHHHHHHHHHHHHhhcC
Q 012488 321 GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENG 362 (462)
Q Consensus 321 ~~v~liGDAAh~~~P~~G~G~~~a~~da~~la~~l~~a~~~~ 362 (462)
+|++++||+.+. ..+.++.-|+.+|..+|+.|.+.+...
T Consensus 423 ~~l~fAG~~t~~---~~~g~v~GA~~SG~~aA~~i~~~l~~~ 461 (472)
T 1b37_A 423 GRVYFTGEHTSE---HYNGYVHGAYLSGIDSAEILINCAQKK 461 (472)
T ss_dssp TTEEECSGGGCT---TTTTSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcEEEeecccCC---CCCCchhHHHHHHHHHHHHHHHHHHhC
Confidence 689999999764 346688889999999999998876543
No 319
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.82 E-value=0.022 Score=53.36 Aligned_cols=33 Identities=24% Similarity=0.289 Sum_probs=31.2
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..|.|||+|.-|...|..|+++|++|+++|+++
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 379999999999999999999999999999886
No 320
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=94.64 E-value=0.031 Score=52.89 Aligned_cols=36 Identities=33% Similarity=0.503 Sum_probs=32.3
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.|+++|.|||+|-.|.++|..|++.|++|++++|.+
T Consensus 12 ~~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 12 HMEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred ccCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 567899999999999999999999999999999875
No 321
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.63 E-value=0.012 Score=58.25 Aligned_cols=54 Identities=20% Similarity=0.337 Sum_probs=41.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCC----------CCCcccccCccccccCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDN----------CKPCGGAIPLCMVGEFDL 103 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~----------~~~~g~~i~~~~l~~~g~ 103 (462)
.|+|+|+|+|-.|..+|..|...|++|+|+|+++.. ...+|.+..+..|++.|+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi 66 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGA 66 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTT
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCC
Confidence 458999999999999999999999999999998721 112455555666655554
No 322
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=94.63 E-value=0.032 Score=51.35 Aligned_cols=32 Identities=28% Similarity=0.301 Sum_probs=30.5
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+|.|||+|..|..+|..|++.|++|++++|++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 69999999999999999999999999999876
No 323
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=94.63 E-value=0.14 Score=49.69 Aligned_cols=50 Identities=8% Similarity=0.030 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCCCh
Q 012488 145 LDAYLRERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANS 211 (462)
Q Consensus 145 l~~~L~~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S 211 (462)
+.+.+.+.+++.|++++.++ |++++. + .|.+.+| .++.+|+||.|.|...
T Consensus 220 ~~~~~~~~l~~~gV~~~~~~~v~~i~~----~---~v~~~~g----------~~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 220 SRKAVASIYNQLGIKLVHNFKIKEIRE----H---EIVDEKG----------NTIPADITILLPPYTG 270 (409)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEECS----S---EEEETTS----------CEEECSEEEEECCEEC
T ss_pred HHHHHHHHHHHCCCEEEcCCceEEECC----C---eEEECCC----------CEEeeeEEEECCCCCc
Confidence 44556667778899999987 888861 1 2566666 6899999999999543
No 324
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=94.58 E-value=0.021 Score=53.48 Aligned_cols=36 Identities=33% Similarity=0.536 Sum_probs=30.9
Q ss_pred CCCCCccEEEECCchHHHHHHHHHHHC-----C-CcEEEEcC
Q 012488 46 LTNRNLRVAVIGGGPAGGAAAETLAKN-----G-VETFLIER 81 (462)
Q Consensus 46 ~~~~~~dVvIVGgG~aGl~~A~~L~~~-----g-~~v~v~E~ 81 (462)
|+.++++|.|||+|..|.++|..|++. | ++|++++|
T Consensus 4 m~~~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 4 MNQQPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 455557899999999999999999999 9 99999987
No 325
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.57 E-value=0.032 Score=52.01 Aligned_cols=33 Identities=24% Similarity=0.460 Sum_probs=31.0
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
++|.|||+|..|..+|..|++.|++|++++|++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 479999999999999999999999999999875
No 326
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=94.51 E-value=0.036 Score=51.61 Aligned_cols=35 Identities=23% Similarity=0.398 Sum_probs=31.9
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+.++|.|||.|-.|...|..|++.|++|+++++++
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 44689999999999999999999999999999876
No 327
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=94.47 E-value=0.014 Score=51.85 Aligned_cols=35 Identities=23% Similarity=0.292 Sum_probs=31.5
Q ss_pred CCCCccEEEECCchHHHHHHHHHHHCCCcEEEEcC
Q 012488 47 TNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIER 81 (462)
Q Consensus 47 ~~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~ 81 (462)
.+..++|.|||.|..|.++|..|+++|++|+++++
T Consensus 3 ~~~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 3 QAPRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCCCEEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred CCCCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 34456899999999999999999999999999987
No 328
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=94.45 E-value=0.035 Score=51.76 Aligned_cols=33 Identities=27% Similarity=0.457 Sum_probs=30.7
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.++|+|||+|-.|.++|..|+ .|.+|+++.|++
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 468999999999999999999 999999999875
No 329
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=94.45 E-value=0.037 Score=51.92 Aligned_cols=33 Identities=33% Similarity=0.481 Sum_probs=31.0
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC--cEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGV--ETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~--~v~v~E~~~ 83 (462)
++|+|||+|-.|..+|..|++.|+ +|+++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 589999999999999999999999 999999875
No 330
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=94.40 E-value=0.029 Score=52.02 Aligned_cols=35 Identities=17% Similarity=0.300 Sum_probs=32.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD 84 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~ 84 (462)
.++|.|||.|-.|...|..|+++|++|+++++++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 45899999999999999999999999999999873
No 331
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.37 E-value=0.044 Score=47.92 Aligned_cols=35 Identities=20% Similarity=0.330 Sum_probs=31.5
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD 84 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~ 84 (462)
.++|.|||+|-.|.++|..|++.|++|+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 45899999999999999999999999999998753
No 332
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.32 E-value=0.039 Score=54.91 Aligned_cols=34 Identities=24% Similarity=0.489 Sum_probs=31.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.++|.|||+|-.|+.+|..|++.|++|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999875
No 333
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.29 E-value=0.046 Score=51.48 Aligned_cols=34 Identities=18% Similarity=0.449 Sum_probs=31.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGV-ETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~~ 83 (462)
..+|.|||||-.|..+|..|++.|+ +|+++|.+.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 3589999999999999999999999 999999875
No 334
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=94.13 E-value=0.055 Score=49.83 Aligned_cols=38 Identities=18% Similarity=0.190 Sum_probs=33.2
Q ss_pred CCCCCccEEEECC-chHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 46 LTNRNLRVAVIGG-GPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 46 ~~~~~~dVvIVGg-G~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
|.+|.++|.|||+ |-.|..+|..|++.|++|+++++++
T Consensus 7 ~~~mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 7 NDVGPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CSCCCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3344468999999 9999999999999999999999875
No 335
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.12 E-value=0.052 Score=52.26 Aligned_cols=34 Identities=24% Similarity=0.271 Sum_probs=31.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
...|+|+|+|++|+.+|..|...|.+|+++|+++
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4589999999999999999999999999999986
No 336
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.08 E-value=0.05 Score=51.44 Aligned_cols=32 Identities=28% Similarity=0.528 Sum_probs=30.2
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERK 82 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~ 82 (462)
++|.|||+|-.|.++|..|++.|++|++++|.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 47999999999999999999999999999984
No 337
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=93.99 E-value=0.46 Score=47.44 Aligned_cols=33 Identities=30% Similarity=0.418 Sum_probs=29.4
Q ss_pred ccEEEECCchHHHHHHHHHHHC--CCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKN--GVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~--g~~v~v~E~~~ 83 (462)
.+|+|||+|-+|.-.+..|++. +.+|+++=|.+
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 4799999999999999999875 78999998876
No 338
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=93.98 E-value=0.029 Score=52.64 Aligned_cols=36 Identities=19% Similarity=0.183 Sum_probs=32.9
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCC-CcEEEEcCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNG-VETFLIERKL 83 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g-~~v~v~E~~~ 83 (462)
+|.++|.|||.|-.|..+|..|++.| ++|+++++++
T Consensus 22 ~M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 22 SMMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp TSCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred ccCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 35568999999999999999999999 9999999875
No 339
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=93.97 E-value=0.055 Score=50.71 Aligned_cols=35 Identities=37% Similarity=0.414 Sum_probs=31.0
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCC--cEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGV--ETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~--~v~v~E~~~ 83 (462)
++++|+|||+|-.|..+|..|+..|+ +++++|.+.
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 34689999999999999999999998 899999875
No 340
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.86 E-value=0.054 Score=50.75 Aligned_cols=34 Identities=29% Similarity=0.514 Sum_probs=31.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGV-ETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~~ 83 (462)
..+|.|||+|-.|..+|..|++.|+ +|+++|+++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 3589999999999999999999998 999999875
No 341
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=93.85 E-value=0.038 Score=52.91 Aligned_cols=32 Identities=28% Similarity=0.320 Sum_probs=30.5
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+|.|||+|-.|...|..|++.|++|+++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 89999999999999999999999999999875
No 342
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.85 E-value=0.059 Score=53.21 Aligned_cols=34 Identities=38% Similarity=0.372 Sum_probs=31.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
...|.|||.|.+|+++|..|+++|++|+++|++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 3579999999999999999999999999999875
No 343
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.83 E-value=0.055 Score=47.68 Aligned_cols=34 Identities=18% Similarity=0.366 Sum_probs=30.9
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERK 82 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~ 82 (462)
....|+|||||..|...|..|.+.|.+|+|++..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 3468999999999999999999999999999864
No 344
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=93.78 E-value=0.063 Score=50.08 Aligned_cols=33 Identities=24% Similarity=0.425 Sum_probs=30.6
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC-cEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGV-ETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~~ 83 (462)
++|+|||+|-.|..+|..|+..|+ +|+++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 589999999999999999999997 999999875
No 345
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=93.71 E-value=0.072 Score=49.75 Aligned_cols=33 Identities=30% Similarity=0.487 Sum_probs=30.8
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEcCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGV-ETFLIERK 82 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~ 82 (462)
..+|.|||+|..|..+|..|+..|+ +|+++|+.
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 3589999999999999999999999 99999987
No 346
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.66 E-value=0.064 Score=49.91 Aligned_cols=32 Identities=38% Similarity=0.554 Sum_probs=30.3
Q ss_pred cEEEECCchHHHHHHHHHHHCCC--cEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGV--ETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~--~v~v~E~~~ 83 (462)
+|+|||+|-.|..+|..|+..|+ +|+++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 69999999999999999999999 999999875
No 347
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=93.65 E-value=0.073 Score=49.69 Aligned_cols=33 Identities=33% Similarity=0.481 Sum_probs=31.4
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
++|.|||.|..|...|..|++.|++|+++++++
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 589999999999999999999999999999876
No 348
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.62 E-value=0.055 Score=52.65 Aligned_cols=33 Identities=24% Similarity=0.433 Sum_probs=31.5
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..|+|||.|..|..+|..|.+.|++|+++|+++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 479999999999999999999999999999987
No 349
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.57 E-value=0.049 Score=53.64 Aligned_cols=33 Identities=21% Similarity=0.406 Sum_probs=31.0
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..|.|||.|.+|+++|..|+++|++|+++|.+.
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~ 38 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRM 38 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCC
Confidence 369999999999999999999999999999876
No 350
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=93.56 E-value=0.076 Score=46.61 Aligned_cols=33 Identities=21% Similarity=0.354 Sum_probs=30.9
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
++|.|||+|-.|...|..|++.|++|++++|+.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999875
No 351
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=93.49 E-value=0.088 Score=49.20 Aligned_cols=36 Identities=22% Similarity=0.347 Sum_probs=32.5
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCC--cEEEEcCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGV--ETFLIERKL 83 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~--~v~v~E~~~ 83 (462)
.+..+|.|||.|..|.++|..|++.|+ +|+++++++
T Consensus 31 ~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 31 LSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 344689999999999999999999999 999999876
No 352
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.48 E-value=0.064 Score=53.10 Aligned_cols=34 Identities=24% Similarity=0.288 Sum_probs=31.9
Q ss_pred ccEEEECCchHHHHHHHHHHHC-CC-cEEEEcCCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKN-GV-ETFLIERKLD 84 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~-g~-~v~v~E~~~~ 84 (462)
++|.|||+|-.|+.+|..|+++ |+ +|+++|+++.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 3799999999999999999999 99 9999999874
No 353
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=93.44 E-value=0.07 Score=50.07 Aligned_cols=35 Identities=31% Similarity=0.446 Sum_probs=31.3
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCC--cEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGV--ETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~--~v~v~E~~~ 83 (462)
...+|.|||+|..|.++|..|+..|+ +++++|.+.
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 34689999999999999999999987 899999864
No 354
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=93.40 E-value=0.096 Score=48.93 Aligned_cols=34 Identities=21% Similarity=0.327 Sum_probs=31.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.++|.|||+|..|...|..|++.|++|+++++++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3579999999999999999999999999999875
No 355
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=93.39 E-value=0.046 Score=48.21 Aligned_cols=33 Identities=27% Similarity=0.412 Sum_probs=30.7
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEE-EcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFL-IERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v-~E~~~ 83 (462)
++|.|||+|-.|.++|..|++.|++|++ ++|++
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 5899999999999999999999999999 88875
No 356
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.37 E-value=0.037 Score=50.41 Aligned_cols=34 Identities=29% Similarity=0.478 Sum_probs=31.0
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
...|+|||||..|+..+..|.+.|.+|+|++...
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4579999999999999999999999999998653
No 357
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.34 E-value=0.061 Score=51.31 Aligned_cols=34 Identities=26% Similarity=0.211 Sum_probs=31.7
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..+|+|+|+|.+|+.+|..|...|.+|+++|+++
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4589999999999999999999999999999886
No 358
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.33 E-value=0.075 Score=49.79 Aligned_cols=34 Identities=32% Similarity=0.569 Sum_probs=29.9
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..++|.|||+|-.|.++|..|++.|++|+++ +++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 4568999999999999999999999999999 654
No 359
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.30 E-value=0.095 Score=49.14 Aligned_cols=33 Identities=18% Similarity=0.459 Sum_probs=30.7
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC-cEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGV-ETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~~ 83 (462)
.+|+|||+|-.|..+|..|+..|+ +|+++|.+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 489999999999999999999998 999999875
No 360
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=93.30 E-value=0.079 Score=50.40 Aligned_cols=33 Identities=30% Similarity=0.288 Sum_probs=31.0
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
++|.|||+|-.|...|..|++.|++|+++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 489999999999999999999999999999875
No 361
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=93.30 E-value=0.081 Score=51.94 Aligned_cols=35 Identities=23% Similarity=0.437 Sum_probs=32.7
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD 84 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~ 84 (462)
..+|.|||.|-.|+.+|..|+++|++|+++++++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999999874
No 362
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=93.29 E-value=0.068 Score=52.51 Aligned_cols=32 Identities=25% Similarity=0.410 Sum_probs=30.5
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+|.|||+|-.|+.+|..|++.|++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999999875
No 363
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=93.27 E-value=0.079 Score=48.78 Aligned_cols=33 Identities=30% Similarity=0.406 Sum_probs=31.1
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
++|.|||.|-.|...|..|++.|++|+++++++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 379999999999999999999999999999876
No 364
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.26 E-value=0.089 Score=47.21 Aligned_cols=35 Identities=31% Similarity=0.478 Sum_probs=31.9
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
...+|.|||+|-.|..+|..|++.|++|++++|++
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 34689999999999999999999999999999876
No 365
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=93.25 E-value=0.11 Score=48.10 Aligned_cols=33 Identities=24% Similarity=0.444 Sum_probs=30.7
Q ss_pred ccEEEEC-CchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIG-GGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVG-gG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.+|.||| +|-.|.++|..|++.|++|+++++++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 4799999 99999999999999999999999765
No 366
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=93.21 E-value=0.097 Score=51.11 Aligned_cols=34 Identities=21% Similarity=0.118 Sum_probs=31.8
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
...|.|||.|-.||.+|..|++.|++|+.+|.++
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 3489999999999999999999999999999886
No 367
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=93.12 E-value=0.28 Score=45.34 Aligned_cols=33 Identities=3% Similarity=-0.052 Sum_probs=25.2
Q ss_pred ccEEEECCch-HHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGP-AGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~-aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.+++|||||. +++.+|..+.+.|.+|+++++..
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~ 180 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNWSTDLVIATNGN 180 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSC
T ss_pred CceeeecCCCchhhhHHHHHHhCCceEEEEeccc
Confidence 3577777775 56788888888899999987653
No 368
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=93.09 E-value=0.082 Score=48.92 Aligned_cols=34 Identities=26% Similarity=0.428 Sum_probs=31.0
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.++|.|||+|..|...|..|++.|++|+++++++
T Consensus 5 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 5 TMKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred cceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3589999999999999999999999999999875
No 369
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=93.06 E-value=0.092 Score=48.98 Aligned_cols=32 Identities=31% Similarity=0.476 Sum_probs=29.7
Q ss_pred cEEEECCchHHHHHHHHHHHC--CCcEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKN--GVETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~--g~~v~v~E~~~ 83 (462)
+|+|||+|-.|..+|..|++. |.+|+++|+++
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 699999999999999999985 78999999976
No 370
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=93.01 E-value=0.095 Score=48.35 Aligned_cols=33 Identities=30% Similarity=0.388 Sum_probs=31.0
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+..|.|||+|.-|...|..|+ +|++|+++|+.+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 468999999999999999999 999999999876
No 371
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=92.99 E-value=0.088 Score=51.73 Aligned_cols=33 Identities=45% Similarity=0.707 Sum_probs=31.3
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEcCCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGVETFLIERKLD 84 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~ 84 (462)
+|.|||+|.-|...|..|+++|++|+++|+++.
T Consensus 56 kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 56 SVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 799999999999999999999999999999863
No 372
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=92.97 E-value=0.099 Score=49.01 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=31.8
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.++|.|||.|..|...|..|++.|++|+++++.+
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4589999999999999999999999999999876
No 373
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.94 E-value=0.037 Score=45.10 Aligned_cols=34 Identities=12% Similarity=0.222 Sum_probs=30.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
...|+|||+|..|..+|..|++.|++|+++++.+
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 3479999999999999999999999999999875
No 374
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=92.87 E-value=0.078 Score=49.54 Aligned_cols=33 Identities=24% Similarity=0.369 Sum_probs=30.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEcCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGV-ETFLIERK 82 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~ 82 (462)
.++|.|||.|..|...|..|++.|+ +|++++++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4689999999999999999999999 99999986
No 375
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.82 E-value=0.083 Score=47.56 Aligned_cols=33 Identities=36% Similarity=0.470 Sum_probs=30.5
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC-cEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGV-ETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~~ 83 (462)
.+|+|||+|-.|+.+|..|++.|+ +++|+|++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 479999999999999999999998 899999875
No 376
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.75 E-value=0.094 Score=50.81 Aligned_cols=34 Identities=29% Similarity=0.297 Sum_probs=31.3
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
...|+|+|+|.+|+.+|..++..|.+|+++|+++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3579999999999999999999999999999875
No 377
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=92.72 E-value=0.093 Score=51.95 Aligned_cols=32 Identities=28% Similarity=0.449 Sum_probs=30.6
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+|.|||+|..|...|..|+++|++|+++|+++
T Consensus 39 kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 69999999999999999999999999999875
No 378
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=92.66 E-value=0.12 Score=51.61 Aligned_cols=36 Identities=17% Similarity=0.163 Sum_probs=32.8
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 48 NRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 48 ~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.|..+|.|||.|..|..+|..|+++|++|++++|.+
T Consensus 8 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 8 HMSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 355689999999999999999999999999999986
No 379
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=92.62 E-value=0.14 Score=47.57 Aligned_cols=34 Identities=32% Similarity=0.443 Sum_probs=31.7
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..+|.|||.|..|...|..|++.|++|+++++++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3589999999999999999999999999999876
No 380
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=92.57 E-value=0.085 Score=49.67 Aligned_cols=30 Identities=30% Similarity=0.468 Sum_probs=29.0
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEcC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGVETFLIER 81 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~ 81 (462)
+|.|||+|-.|..+|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999998
No 381
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.51 E-value=0.12 Score=49.91 Aligned_cols=34 Identities=29% Similarity=0.303 Sum_probs=31.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
...|+|+|+|.+|+.+|..++..|.+|+++|+.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4589999999999999999999999999999876
No 382
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=92.49 E-value=0.12 Score=48.47 Aligned_cols=33 Identities=21% Similarity=0.178 Sum_probs=30.3
Q ss_pred ccEEEECCchHHHH-HHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGA-AAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~-~A~~L~~~g~~v~v~E~~~ 83 (462)
.+|.|||.|.+|++ +|..|.++|++|.+.|++.
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 47999999999996 8899999999999999876
No 383
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=92.45 E-value=0.15 Score=45.77 Aligned_cols=33 Identities=15% Similarity=0.251 Sum_probs=30.9
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC----cEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGV----ETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~----~v~v~E~~~ 83 (462)
++|.|||+|-.|...|..|.+.|+ +|+++++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 579999999999999999999998 999999875
No 384
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=92.40 E-value=0.13 Score=51.01 Aligned_cols=32 Identities=38% Similarity=0.543 Sum_probs=30.8
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+|.|||+|.-|...|..|+++|++|+++|+++
T Consensus 7 kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 79999999999999999999999999999886
No 385
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=92.38 E-value=0.14 Score=47.86 Aligned_cols=33 Identities=24% Similarity=0.399 Sum_probs=31.0
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC-cEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGV-ETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~~ 83 (462)
.+|.|||+|..|.++|..|+..|+ +++++|.++
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 489999999999999999999999 999999876
No 386
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.34 E-value=0.091 Score=48.35 Aligned_cols=32 Identities=25% Similarity=0.429 Sum_probs=30.6
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+|.|||.|..|...|..|++.|++|+++++++
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 69999999999999999999999999999876
No 387
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.28 E-value=0.13 Score=49.20 Aligned_cols=33 Identities=24% Similarity=0.446 Sum_probs=30.9
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..|+|+|+|.+|+.++..|+..|.+|+++++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999999875
No 388
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=92.25 E-value=0.13 Score=44.73 Aligned_cols=32 Identities=38% Similarity=0.445 Sum_probs=30.1
Q ss_pred cEEEEC-CchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 52 RVAVIG-GGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 52 dVvIVG-gG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+|+|+| +|-.|..+|..|++.|++|++++|++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 699999 99999999999999999999999875
No 389
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=92.20 E-value=0.081 Score=51.40 Aligned_cols=30 Identities=30% Similarity=0.512 Sum_probs=28.2
Q ss_pred ccEEEECCchHHHHHHHHHHH-CCCcEEEEc
Q 012488 51 LRVAVIGGGPAGGAAAETLAK-NGVETFLIE 80 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~-~g~~v~v~E 80 (462)
++|.|||+|-.|.++|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 589999999999999999998 599999999
No 390
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=92.18 E-value=0.14 Score=46.73 Aligned_cols=32 Identities=25% Similarity=0.403 Sum_probs=30.1
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+|.|||+|..|..+|..|.+.|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999999875
No 391
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=92.18 E-value=0.1 Score=47.68 Aligned_cols=34 Identities=18% Similarity=0.159 Sum_probs=31.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.+.|+|.|||..|..++..|.++|++|+++.|++
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 4589999999999999999999999999999876
No 392
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=92.15 E-value=0.11 Score=47.87 Aligned_cols=33 Identities=24% Similarity=0.307 Sum_probs=30.4
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC--cEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGV--ETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~--~v~v~E~~~ 83 (462)
++|.|||+|..|.++|..|++.|+ +++++|+++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 379999999999999999999998 899999875
No 393
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=92.14 E-value=0.12 Score=49.20 Aligned_cols=35 Identities=23% Similarity=0.407 Sum_probs=31.8
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCC-cEEEEcCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGV-ETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~~ 83 (462)
.+.+|+|+|||.||..+|..|...|. +|+++|++.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 35689999999999999999999999 999999874
No 394
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=92.08 E-value=0.14 Score=47.53 Aligned_cols=33 Identities=27% Similarity=0.300 Sum_probs=31.1
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
++|.|||.|..|...|..|++.|++|+++++++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 479999999999999999999999999999875
No 395
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.99 E-value=0.12 Score=48.45 Aligned_cols=32 Identities=28% Similarity=0.495 Sum_probs=30.2
Q ss_pred cEEEECCchHHHHHHHHHHHCCC--cEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGV--ETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~--~v~v~E~~~ 83 (462)
+|.|||+|-.|.++|..|++.|+ +|+++|+++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 69999999999999999999999 999999875
No 396
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=91.93 E-value=0.11 Score=49.99 Aligned_cols=34 Identities=21% Similarity=0.313 Sum_probs=31.3
Q ss_pred ccEEEECCchHHHHHHHHHHHCC-------CcEEEEcCCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNG-------VETFLIERKLD 84 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g-------~~v~v~E~~~~ 84 (462)
++|.|||+|-.|.++|..|++.| ++|+++++++.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 47999999999999999999999 99999998763
No 397
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=91.92 E-value=0.11 Score=50.37 Aligned_cols=31 Identities=23% Similarity=0.258 Sum_probs=29.4
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+|.|||+|-.|+.+|..|++ |++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 69999999999999999999 99999999875
No 398
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=91.91 E-value=0.19 Score=47.42 Aligned_cols=34 Identities=24% Similarity=0.316 Sum_probs=31.5
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..+|.|||.|.-|.++|..|++.|++|+++++++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3479999999999999999999999999999875
No 399
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=91.88 E-value=0.13 Score=51.04 Aligned_cols=33 Identities=18% Similarity=0.419 Sum_probs=30.8
Q ss_pred ccEEEECCchHHHHHHHHHHHC--CCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKN--GVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~--g~~v~v~E~~~ 83 (462)
++|.|||.|-.|+.+|..|++. |++|+++++++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999998 89999999876
No 400
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=91.88 E-value=0.16 Score=47.65 Aligned_cols=33 Identities=21% Similarity=0.307 Sum_probs=30.6
Q ss_pred ccEEEECCchHHHHHHHHHHHCC----CcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNG----VETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g----~~v~v~E~~~ 83 (462)
++|.|||+|-.|.++|..|.+.| ++|++++|++
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 47999999999999999999999 8999999875
No 401
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=91.85 E-value=0.16 Score=46.89 Aligned_cols=32 Identities=28% Similarity=0.362 Sum_probs=30.3
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+|.|||+|-.|...|..|++.|++|+++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999875
No 402
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=91.84 E-value=0.15 Score=51.90 Aligned_cols=35 Identities=34% Similarity=0.416 Sum_probs=32.8
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDN 85 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~~ 85 (462)
..|+|+|+|..|..+|..|.+.|++|+++|+++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHH
Confidence 57999999999999999999999999999999843
No 403
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=91.84 E-value=0.11 Score=52.81 Aligned_cols=35 Identities=29% Similarity=0.500 Sum_probs=32.5
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD 84 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~ 84 (462)
..+|+|||+|..|+-+|..|++.|.+|+|++|.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 45899999999999999999999999999999873
No 404
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=91.78 E-value=0.18 Score=49.95 Aligned_cols=33 Identities=18% Similarity=0.269 Sum_probs=31.6
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
++|.|||.|..|..+|..|+++|++|+++++.+
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999999999999999999999999999987
No 405
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=91.76 E-value=0.17 Score=48.15 Aligned_cols=33 Identities=24% Similarity=0.467 Sum_probs=31.4
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
++|.|||.|..|..+|..|++.|++|+++++.+
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999999876
No 406
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=91.68 E-value=0.14 Score=47.65 Aligned_cols=33 Identities=36% Similarity=0.640 Sum_probs=30.4
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC--cEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGV--ETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~--~v~v~E~~~ 83 (462)
++|.|||+|..|.++|..|++.|+ +++++|..+
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 379999999999999999999987 899999876
No 407
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=91.60 E-value=0.13 Score=47.55 Aligned_cols=36 Identities=28% Similarity=0.383 Sum_probs=28.9
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD 84 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~ 84 (462)
|..+|.+||-|..|...|..|.++|++|++++|.+.
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CCCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 444799999999999999999999999999999873
No 408
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=91.60 E-value=0.16 Score=50.57 Aligned_cols=33 Identities=18% Similarity=0.438 Sum_probs=30.7
Q ss_pred ccEEEECCchHHHHHHHHHHHC--CCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKN--GVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~--g~~v~v~E~~~ 83 (462)
++|.|||.|-.|+.+|..|++. |++|+++|+++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4899999999999999999998 79999999876
No 409
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=91.59 E-value=0.2 Score=46.83 Aligned_cols=33 Identities=18% Similarity=0.390 Sum_probs=30.8
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC-cEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGV-ETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~~ 83 (462)
.+|.|||+|..|.++|..|+..|+ +++++|.++
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 479999999999999999999988 999999876
No 410
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.57 E-value=0.17 Score=48.17 Aligned_cols=32 Identities=25% Similarity=0.428 Sum_probs=30.5
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.|+|+|||..|..+|+.+++.|++|+++|.++
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~ 34 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNP 34 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 69999999999999999999999999999876
No 411
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=91.56 E-value=0.28 Score=48.93 Aligned_cols=49 Identities=20% Similarity=0.183 Sum_probs=35.3
Q ss_pred HHHHHCCCEEEcce-eEEEEecCCCCCCEEEEEeccCCccCCCCceeEEEecEEEecCCCChH
Q 012488 151 ERAEKNGASVINGL-FMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSR 212 (462)
Q Consensus 151 ~~~~~~gv~i~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~adlvI~AdG~~S~ 212 (462)
+.+++.|++++.+. |.++.. ++....+.+.+| .++.+|+||.|.|..+.
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~---~~~v~~v~~~~g----------~~i~aD~Vv~a~G~~p~ 314 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEG---NEKVERVIDMNN----------HEYKVDALIFADGRRPD 314 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEEC---SSSCCEEEETTC----------CEEECSEEEECCCEEEC
T ss_pred HHHHhCCcEEEeCCeeEEEec---CCceEEEEeCCC----------eEEEeCEEEECCCcCcC
Confidence 34556799999887 888872 223334555555 78999999999997654
No 412
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=91.54 E-value=0.17 Score=46.80 Aligned_cols=33 Identities=27% Similarity=0.455 Sum_probs=30.9
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
++|.|||+|-.|...|..|.+.|++|+++++++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999875
No 413
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=91.46 E-value=0.15 Score=46.07 Aligned_cols=32 Identities=31% Similarity=0.525 Sum_probs=30.0
Q ss_pred cEEEECCchHHHHHHHHHHHCC-CcEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNG-VETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g-~~v~v~E~~~ 83 (462)
+|.|||+|-.|...|..|++.| ++|+++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 6999999999999999999999 9999999875
No 414
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.31 E-value=0.19 Score=48.17 Aligned_cols=33 Identities=24% Similarity=0.449 Sum_probs=30.9
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..|+|+|+|..|+.+|..|+..|.+|+++++++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 579999999999999999999999999999875
No 415
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=91.30 E-value=0.22 Score=43.33 Aligned_cols=32 Identities=31% Similarity=0.493 Sum_probs=30.1
Q ss_pred cEEEECC-chHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 52 RVAVIGG-GPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 52 dVvIVGg-G~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+|+|.|| |..|..++..|.++|++|+++.|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 6999996 9999999999999999999999986
No 416
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=91.27 E-value=0.2 Score=49.76 Aligned_cols=33 Identities=18% Similarity=0.269 Sum_probs=31.1
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
++|.|||+|..|..+|..|+++|++|++++|.+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999876
No 417
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=91.25 E-value=3.6 Score=42.51 Aligned_cols=36 Identities=19% Similarity=0.021 Sum_probs=28.7
Q ss_pred CCEEEEccCCcCcccCCcccHHHHHHHHHHHHHHHHHHh
Q 012488 321 GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGS 359 (462)
Q Consensus 321 ~~v~liGDAAh~~~P~~G~G~~~a~~da~~la~~l~~a~ 359 (462)
+|+++.|++.+...+- -+.-|+++|..+|+.|.+.+
T Consensus 623 grl~FAGe~ts~~~~g---~v~GAi~SG~raA~~i~~~~ 658 (662)
T 2z3y_A 623 PRLFFAGEHTIRNYPA---TVHGALLSGLREAGRIADQF 658 (662)
T ss_dssp CCEEECSGGGCTTSTT---SHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEeccccCCCCc---CHHHHHHHHHHHHHHHHHHc
Confidence 7999999998865543 46668999999999887765
No 418
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=91.23 E-value=0.25 Score=47.55 Aligned_cols=39 Identities=28% Similarity=0.411 Sum_probs=34.2
Q ss_pred CCCCCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 45 KLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 45 ~~~~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+|.++...|+|+|+|..|...+.++++.|++|++++..+
T Consensus 6 pm~~~~~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~ 44 (391)
T 1kjq_A 6 ALRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYA 44 (391)
T ss_dssp TTSTTCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESST
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCC
Confidence 355566789999999999999999999999999999875
No 419
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=91.19 E-value=0.21 Score=46.64 Aligned_cols=34 Identities=35% Similarity=0.523 Sum_probs=30.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC--cEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGV--ETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~--~v~v~E~~~ 83 (462)
..+|+|||+|..|.++|+.|+..|+ +++++|.+.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 3589999999999999999998876 899999875
No 420
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=91.10 E-value=0.18 Score=47.94 Aligned_cols=34 Identities=32% Similarity=0.449 Sum_probs=31.2
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCC-cEEEEcCC
Q 012488 49 RNLRVAVIGGGPAGGAAAETLAKNGV-ETFLIERK 82 (462)
Q Consensus 49 ~~~dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~ 82 (462)
.+.+|+|+|||-+|..+|..|...|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 35689999999999999999999998 79999987
No 421
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=91.08 E-value=0.18 Score=45.46 Aligned_cols=34 Identities=21% Similarity=0.346 Sum_probs=31.0
Q ss_pred ccEEEECCchHHHHHHHHHHHCC----CcEEEEcCCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNG----VETFLIERKLD 84 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g----~~v~v~E~~~~ 84 (462)
++|.|||+|-.|...|..|++.| ++|+++++++.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 47999999999999999999999 79999998763
No 422
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=91.08 E-value=0.08 Score=47.05 Aligned_cols=33 Identities=18% Similarity=0.112 Sum_probs=30.0
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
...|+|+|+|..|..+|..|.+.|+ |+++|+++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 4479999999999999999999999 99999876
No 423
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=91.04 E-value=0.27 Score=45.98 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=30.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC--cEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGV--ETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~--~v~v~E~~~ 83 (462)
..+|.|||+|..|..+|..|+..|+ +++++|.+.
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 3589999999999999999999998 899999865
No 424
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=90.95 E-value=0.19 Score=46.01 Aligned_cols=31 Identities=35% Similarity=0.478 Sum_probs=29.3
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+|.|||+|..|...|..|++ |++|+++++++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 69999999999999999999 99999999875
No 425
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=90.93 E-value=0.23 Score=45.69 Aligned_cols=33 Identities=42% Similarity=0.546 Sum_probs=30.8
Q ss_pred ccEEEECC-chHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGG-GPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGg-G~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
|+|+|.|| |..|..++..|.++|++|+++-|++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 47999999 9999999999999999999998876
No 426
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=90.92 E-value=0.27 Score=45.02 Aligned_cols=33 Identities=27% Similarity=0.422 Sum_probs=31.0
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC---cEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGV---ETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~---~v~v~E~~~ 83 (462)
++|.|||+|--|.+.|..|.+.|+ +|+++++++
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 479999999999999999999999 999999876
No 427
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=90.91 E-value=0.22 Score=49.50 Aligned_cols=33 Identities=27% Similarity=0.468 Sum_probs=30.9
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
++|.|||+|-.|..+|..|+++|++|++++|.+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 379999999999999999999999999999875
No 428
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=90.90 E-value=0.18 Score=47.00 Aligned_cols=33 Identities=27% Similarity=0.453 Sum_probs=30.3
Q ss_pred ccEEEECCchHHHHHHHHHHHCC--CcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNG--VETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g--~~v~v~E~~~ 83 (462)
++|+|||+|-.|.++|..|++.| .+|+++|++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 37999999999999999999999 6999999875
No 429
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.80 E-value=0.22 Score=47.77 Aligned_cols=34 Identities=29% Similarity=0.390 Sum_probs=31.3
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
...|+|+|+|..|+.+|..++..|.+|+++++.+
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3579999999999999999999999999999875
No 430
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=90.77 E-value=0.17 Score=47.51 Aligned_cols=34 Identities=26% Similarity=0.249 Sum_probs=30.3
Q ss_pred CCccEEEECC-chHHHHHHHHHHHCCC-------cEEEEcCC
Q 012488 49 RNLRVAVIGG-GPAGGAAAETLAKNGV-------ETFLIERK 82 (462)
Q Consensus 49 ~~~dVvIVGg-G~aGl~~A~~L~~~g~-------~v~v~E~~ 82 (462)
++++|+|+|| |..|..++..|...|+ +++++|..
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 4568999998 9999999999999886 79999987
No 431
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=90.75 E-value=0.24 Score=45.23 Aligned_cols=32 Identities=25% Similarity=0.462 Sum_probs=29.9
Q ss_pred cEEEECCchHHHHHHHHHHHCCC--cEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGV--ETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~--~v~v~E~~~ 83 (462)
.|.|||+|..|..+|..|++.|+ +|+++++++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 69999999999999999999998 899999875
No 432
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=90.72 E-value=0.26 Score=43.04 Aligned_cols=32 Identities=31% Similarity=0.548 Sum_probs=30.2
Q ss_pred cEEEECC-chHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 52 RVAVIGG-GPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 52 dVvIVGg-G~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+|+|.|| |..|..++..|.++|++|+++.|++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 5999998 9999999999999999999999875
No 433
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=90.66 E-value=0.14 Score=48.67 Aligned_cols=34 Identities=24% Similarity=0.318 Sum_probs=31.3
Q ss_pred ccEEEECCchHHHHHHHHHHHCC-------CcEEEEcCCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNG-------VETFLIERKLD 84 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g-------~~v~v~E~~~~ 84 (462)
++|.|||+|-.|.++|..|++.| ++|+++++++.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 47999999999999999999999 99999998763
No 434
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=90.66 E-value=0.23 Score=49.33 Aligned_cols=33 Identities=18% Similarity=0.288 Sum_probs=31.2
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.+|.|||.|..|..+|..|+++|++|++++|.+
T Consensus 16 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 16 QQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp BSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 479999999999999999999999999999875
No 435
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=90.64 E-value=0.23 Score=46.44 Aligned_cols=34 Identities=26% Similarity=0.465 Sum_probs=30.2
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC--cEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGV--ETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~--~v~v~E~~~ 83 (462)
+++|+|||+|-.|.++|..|+..|+ +++++|.+.
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3689999999999999999998885 899999764
No 436
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=90.59 E-value=0.27 Score=48.75 Aligned_cols=33 Identities=18% Similarity=0.236 Sum_probs=31.2
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.+|.|||.|..|..+|..|+++|++|++++|.+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 579999999999999999999999999999875
No 437
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=90.56 E-value=0.23 Score=43.51 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=30.8
Q ss_pred ccEEEECC-chHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGG-GPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGg-G~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+.|+|.|| |..|..++..|.+.|++|+++.|.+
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 47999996 9999999999999999999999986
No 438
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=90.46 E-value=0.27 Score=43.49 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=31.4
Q ss_pred CccEEEECC-chHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGG-GPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGg-G~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.+.|+|.|| |-.|..++..|.++|++|+++.|++
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 347999998 9999999999999999999999976
No 439
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=90.45 E-value=0.26 Score=45.78 Aligned_cols=33 Identities=24% Similarity=0.411 Sum_probs=30.5
Q ss_pred ccEEEECC-chHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGG-GPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGg-G~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..|+|.|| |-.|..++..|.+.|++|+++.|++
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTT
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCC
Confidence 37999997 9999999999999999999999876
No 440
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=90.39 E-value=0.32 Score=44.40 Aligned_cols=34 Identities=24% Similarity=0.314 Sum_probs=31.5
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD 84 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~ 84 (462)
+.|+|.|+|..|..++..|.+.|++|+++.|...
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 3799999999999999999999999999999863
No 441
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.36 E-value=0.27 Score=44.75 Aligned_cols=33 Identities=24% Similarity=0.350 Sum_probs=30.5
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..|+|+|+|-+|.++|..|++.|.+|+|++|..
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 479999999999999999999999999998864
No 442
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=90.31 E-value=0.36 Score=45.22 Aligned_cols=34 Identities=24% Similarity=0.334 Sum_probs=30.8
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC--cEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGV--ETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~--~v~v~E~~~ 83 (462)
..+|.|||+|-.|.++|+.|+.+|+ +++++|.+.
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 4589999999999999999999998 899999864
No 443
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=90.27 E-value=0.26 Score=46.09 Aligned_cols=34 Identities=21% Similarity=0.388 Sum_probs=30.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC--cEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGV--ETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~--~v~v~E~~~ 83 (462)
..+|+|||+|..|.++|..|+..|+ +++++|...
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 3589999999999999999999988 899999864
No 444
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=90.18 E-value=0.37 Score=46.90 Aligned_cols=33 Identities=15% Similarity=0.275 Sum_probs=30.6
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..|+|+|+|..|..++.++++.|++|++++..+
T Consensus 36 ~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~ 68 (419)
T 4e4t_A 36 AWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDP 68 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 479999999999999999999999999998764
No 445
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=90.15 E-value=0.24 Score=44.67 Aligned_cols=33 Identities=21% Similarity=0.365 Sum_probs=30.6
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
++|.|||+|-.|...|..|.+.|++|.++++++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 479999999999999999999999999999875
No 446
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=90.13 E-value=0.24 Score=51.91 Aligned_cols=32 Identities=34% Similarity=0.473 Sum_probs=30.8
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+|.|||+|..|...|..|+++|++|+++|+++
T Consensus 314 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 69999999999999999999999999999986
No 447
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=90.04 E-value=0.24 Score=45.86 Aligned_cols=33 Identities=24% Similarity=0.498 Sum_probs=29.9
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC--cEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGV--ETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~--~v~v~E~~~ 83 (462)
.+|.|||||..|..+|..|+..|+ +++++|.+.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 489999999999999999999998 999999876
No 448
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=90.03 E-value=0.36 Score=41.35 Aligned_cols=33 Identities=21% Similarity=0.398 Sum_probs=30.8
Q ss_pred ccEEEECC-chHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGG-GPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGg-G~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+.|+|.|| |-.|..++..|.+.|++|+++.|++
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 47999999 9999999999999999999999976
No 449
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=90.00 E-value=0.25 Score=44.67 Aligned_cols=33 Identities=21% Similarity=0.341 Sum_probs=30.4
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCc-EEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVE-TFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~-v~v~E~~~ 83 (462)
++|.|||+|-.|...|..|++.|++ |.++++++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 5799999999999999999999999 89999875
No 450
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=90.00 E-value=0.32 Score=45.83 Aligned_cols=33 Identities=36% Similarity=0.405 Sum_probs=30.6
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..|.|||+|-.|.+.|..|++.|++|+++++.+
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 369999999999999999999999999999875
No 451
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=89.96 E-value=0.33 Score=43.97 Aligned_cols=35 Identities=23% Similarity=0.362 Sum_probs=31.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD 84 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~ 84 (462)
...|+|+|+|-+|.++|..|++.|.+|+|+.|...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 45799999999999999999999999999998863
No 452
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=89.90 E-value=0.25 Score=44.67 Aligned_cols=30 Identities=33% Similarity=0.375 Sum_probs=28.2
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEcC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGVETFLIER 81 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~ 81 (462)
+|.|||+|-.|..+|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 699999999999999999999999999866
No 453
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=89.77 E-value=0.3 Score=45.16 Aligned_cols=33 Identities=21% Similarity=0.283 Sum_probs=30.5
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC-cEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGV-ETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~~ 83 (462)
..|+|+|+|.+|.++|..|++.|. +|+|+.|..
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 479999999999999999999998 899999875
No 454
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=89.73 E-value=0.28 Score=48.42 Aligned_cols=33 Identities=18% Similarity=0.287 Sum_probs=30.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERK 82 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~ 82 (462)
...|+|||||.+|...+..|.+.|.+|+|++.+
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 357999999999999999999999999999975
No 455
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=89.66 E-value=0.25 Score=47.17 Aligned_cols=40 Identities=20% Similarity=0.395 Sum_probs=29.5
Q ss_pred CCCCCCCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 43 SPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 43 ~~~~~~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.+.|...+++|+|+|||-.|...|..|++ .++|++.++..
T Consensus 9 ~~~~~g~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~ 48 (365)
T 3abi_A 9 HHHIEGRHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNN 48 (365)
T ss_dssp -------CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCH
T ss_pred cccccCCccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCH
Confidence 35577778899999999999999999975 58999998865
No 456
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=89.64 E-value=0.36 Score=45.23 Aligned_cols=34 Identities=24% Similarity=0.418 Sum_probs=30.7
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGV-ETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~~ 83 (462)
...|+|||+|-.|+.+|..|++.|+ +++|+|.+.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 3589999999999999999999998 688899876
No 457
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=89.58 E-value=0.34 Score=43.51 Aligned_cols=33 Identities=36% Similarity=0.369 Sum_probs=30.1
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC-cEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGV-ETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~~ 83 (462)
..|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 479999999999999999999998 688999875
No 458
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=89.58 E-value=0.44 Score=46.55 Aligned_cols=38 Identities=24% Similarity=0.393 Sum_probs=33.0
Q ss_pred CCCCCccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 46 LTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 46 ~~~~~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
|.++...|+|+|+|..|..++.++++.|++|++++..+
T Consensus 15 ~~~~~~~ili~g~g~~g~~~~~a~~~~G~~v~~v~~~~ 52 (433)
T 2dwc_A 15 TTDSAQKILLLGSGELGKEIAIEAQRLGVEVVAVDRYA 52 (433)
T ss_dssp TSTTCCEEEEESCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 34445689999999999999999999999999998765
No 459
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=89.54 E-value=0.21 Score=45.94 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=29.7
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
++|.|||+|-.|...|..|++.|++|++++ ++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 479999999999999999999999999998 54
No 460
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=89.46 E-value=0.56 Score=44.94 Aligned_cols=34 Identities=24% Similarity=0.471 Sum_probs=31.3
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
...|+|+|+|.-|..++.++++.|++|++++..+
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~ 45 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSE 45 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3579999999999999999999999999999765
No 461
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=89.46 E-value=0.42 Score=44.56 Aligned_cols=40 Identities=18% Similarity=0.240 Sum_probs=28.3
Q ss_pred CCCCCCC-ccEEEECC-chHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 44 PKLTNRN-LRVAVIGG-GPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 44 ~~~~~~~-~dVvIVGg-G~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..|.... .-|+|.|| |-.|..+|..|++.|.+|+++++..
T Consensus 39 ~~m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~ 80 (317)
T 3oec_A 39 ARMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCR 80 (317)
T ss_dssp ---CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred chhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEeccc
Confidence 3444433 34566665 5678999999999999999999875
No 462
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=89.41 E-value=0.31 Score=47.50 Aligned_cols=33 Identities=24% Similarity=0.375 Sum_probs=31.5
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.+..|||.|-.|+.+|..|+++|++|+++|+++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 478999999999999999999999999999987
No 463
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=89.26 E-value=0.3 Score=51.11 Aligned_cols=32 Identities=28% Similarity=0.427 Sum_probs=30.7
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+|.|||+|..|...|..|+++|++|+++|+++
T Consensus 316 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 316 QAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 69999999999999999999999999999876
No 464
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=89.19 E-value=0.3 Score=44.88 Aligned_cols=34 Identities=29% Similarity=0.558 Sum_probs=30.8
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGV-ETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~~ 83 (462)
...|+|||+|-.|+.+|..|++.|+ +++|+|.+.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 4689999999999999999999997 788999775
No 465
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=89.05 E-value=0.37 Score=47.41 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=30.7
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..|+|+|+|..|..+|..|+..|.+|+++|+++
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 479999999999999999999999999999864
No 466
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=88.99 E-value=0.43 Score=44.12 Aligned_cols=35 Identities=29% Similarity=0.461 Sum_probs=32.0
Q ss_pred CccEEEECC-chHHHHHHHHHHHCCCcEEEEcCCCC
Q 012488 50 NLRVAVIGG-GPAGGAAAETLAKNGVETFLIERKLD 84 (462)
Q Consensus 50 ~~dVvIVGg-G~aGl~~A~~L~~~g~~v~v~E~~~~ 84 (462)
...|+|.|| |..|..++..|.+.|++|+++.|...
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 458999999 99999999999999999999998763
No 467
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=88.88 E-value=0.33 Score=44.24 Aligned_cols=33 Identities=33% Similarity=0.488 Sum_probs=30.8
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..|+|||+|-+|.+.|..|.+.|.+|++++|..
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 579999999999999999999999999999875
No 468
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=88.84 E-value=0.36 Score=45.02 Aligned_cols=33 Identities=24% Similarity=0.278 Sum_probs=29.7
Q ss_pred ccEEEECC-chHHHHHHHHHHHCC--CcEEEEcCCC
Q 012488 51 LRVAVIGG-GPAGGAAAETLAKNG--VETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGg-G~aGl~~A~~L~~~g--~~v~v~E~~~ 83 (462)
++|+|||| |-.|..+|..|+..| .+++++|.++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 37999998 999999999999988 6899999875
No 469
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=88.81 E-value=0.59 Score=44.94 Aligned_cols=33 Identities=21% Similarity=0.373 Sum_probs=30.8
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..|+|+|+|..|..++.++.+.|++|++++..+
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 479999999999999999999999999999765
No 470
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=88.77 E-value=0.46 Score=43.94 Aligned_cols=34 Identities=32% Similarity=0.333 Sum_probs=31.5
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
...|.|||+|..|..+|..|...|.+|+++++..
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4579999999999999999999999999999875
No 471
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=88.75 E-value=0.43 Score=44.87 Aligned_cols=36 Identities=19% Similarity=0.243 Sum_probs=31.0
Q ss_pred CCccEEEECC-chHHHHHHHHHHHCCCcEEEEcCCCC
Q 012488 49 RNLRVAVIGG-GPAGGAAAETLAKNGVETFLIERKLD 84 (462)
Q Consensus 49 ~~~dVvIVGg-G~aGl~~A~~L~~~g~~v~v~E~~~~ 84 (462)
....|+|.|| |..|..++..|.+.|++|+++.|.+.
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 3468999999 99999999999999999999998863
No 472
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=88.74 E-value=0.33 Score=45.55 Aligned_cols=34 Identities=24% Similarity=0.297 Sum_probs=30.1
Q ss_pred CccEEEEC-CchHHHHHHHHHHHCC--CcEEEEcCCC
Q 012488 50 NLRVAVIG-GGPAGGAAAETLAKNG--VETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVG-gG~aGl~~A~~L~~~g--~~v~v~E~~~ 83 (462)
+++|+|+| +|..|..++..|+..| .+|+++|.++
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~ 44 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVN 44 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 35899999 7999999999999998 7899999765
No 473
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=88.71 E-value=0.49 Score=44.55 Aligned_cols=33 Identities=21% Similarity=0.298 Sum_probs=29.7
Q ss_pred ccEEEECC-chHHHHHHHHHHHCCC--cEEEEcCCC
Q 012488 51 LRVAVIGG-GPAGGAAAETLAKNGV--ETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGg-G~aGl~~A~~L~~~g~--~v~v~E~~~ 83 (462)
.+|+|||+ |-.|.++|..++..|+ +++++|.+.
T Consensus 9 ~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 9 EKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 47999998 9999999999999985 899999864
No 474
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=88.68 E-value=0.42 Score=44.01 Aligned_cols=34 Identities=29% Similarity=0.329 Sum_probs=31.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
...|.|||.|..|..+|..|+..|.+|+++++..
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3579999999999999999999999999999875
No 475
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=88.58 E-value=0.56 Score=44.90 Aligned_cols=35 Identities=20% Similarity=0.101 Sum_probs=32.5
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLD 84 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~~ 84 (462)
+..++|+|||..|..+|..++..|++|+|+|.++.
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~ 238 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPV 238 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchh
Confidence 45899999999999999999999999999998874
No 476
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=88.52 E-value=0.4 Score=44.76 Aligned_cols=34 Identities=24% Similarity=0.499 Sum_probs=30.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC--cEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGV--ETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~--~v~v~E~~~ 83 (462)
+++|+|||+|-.|.++|..|+..++ +++++|.+.
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 40 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVK 40 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 3689999999999999999998886 899999864
No 477
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=88.50 E-value=0.37 Score=46.60 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=30.8
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..|+|+|.|..|..+|..|+..|.+|+++|+++
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 479999999999999999999999999999865
No 478
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=88.48 E-value=0.37 Score=46.68 Aligned_cols=33 Identities=21% Similarity=0.425 Sum_probs=30.3
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
...|+|+|||..|..++.++.+.|++|++++ .+
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~ 56 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRLNIQVNVLD-AD 56 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-ST
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CC
Confidence 4589999999999999999999999999999 54
No 479
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=88.47 E-value=0.35 Score=47.91 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=30.8
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..|+|+|.|..|..+|..|+..|.+|+++|+.+
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999875
No 480
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=88.45 E-value=0.6 Score=40.65 Aligned_cols=32 Identities=22% Similarity=0.361 Sum_probs=29.2
Q ss_pred cEEEECC-chHHHHHHHHHH-HCCCcEEEEcCCC
Q 012488 52 RVAVIGG-GPAGGAAAETLA-KNGVETFLIERKL 83 (462)
Q Consensus 52 dVvIVGg-G~aGl~~A~~L~-~~g~~v~v~E~~~ 83 (462)
.|+|.|| |-.|..+|..|+ +.|++|+++.|++
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 3999995 999999999999 8999999999875
No 481
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=88.44 E-value=8.5 Score=37.29 Aligned_cols=36 Identities=17% Similarity=0.096 Sum_probs=28.9
Q ss_pred CCCEEEEccCCcCcccCCcccHHHHHHHHHHHHHHHHHH
Q 012488 320 SGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEG 358 (462)
Q Consensus 320 ~~~v~liGDAAh~~~P~~G~G~~~a~~da~~la~~l~~a 358 (462)
.+|+.++||+.+...| | ++.-|+.+|..+|+.|.+.
T Consensus 415 ~~~l~~aG~~~~~~~~--g-~v~gA~~SG~~aA~~i~~~ 450 (453)
T 2yg5_A 415 VGPIHFSCSDIAAEGY--Q-HVDGAVRMGQRTAADIIAR 450 (453)
T ss_dssp BTTEEECCGGGCSTTT--T-SHHHHHHHHHHHHHHHHHH
T ss_pred cCceEEeecccccccc--c-chHHHHHHHHHHHHHHHHH
Confidence 3789999999765433 4 7888999999999998764
No 482
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=88.42 E-value=0.36 Score=43.96 Aligned_cols=33 Identities=21% Similarity=0.294 Sum_probs=30.7
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..|+|+|+|-+|.++|..|++.|.+|+|+.|..
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 479999999999999999999999999999875
No 483
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=88.41 E-value=0.45 Score=44.56 Aligned_cols=34 Identities=21% Similarity=0.388 Sum_probs=30.3
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC--cEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGV--ETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~--~v~v~E~~~ 83 (462)
+++|+|||+|-.|.++|+.|+..++ +++++|.+.
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~ 44 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 4689999999999999999998876 899999864
No 484
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=88.35 E-value=8.4 Score=37.84 Aligned_cols=38 Identities=18% Similarity=0.050 Sum_probs=31.3
Q ss_pred CCCEEEEccCCcCcccCCcccHHHHHHHHHHHHHHHHHHhhc
Q 012488 320 SGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSEN 361 (462)
Q Consensus 320 ~~~v~liGDAAh~~~P~~G~G~~~a~~da~~la~~l~~a~~~ 361 (462)
.+|+.++|++.+. .+.|+.-|+.+|..+|+.|...+..
T Consensus 450 ~~~l~faG~~~~~----~~~~v~gAi~sg~~aA~~i~~~l~~ 487 (489)
T 2jae_A 450 VDKIYFAGDHLSN----AIAWQHGALTSARDVVTHIHERVAQ 487 (489)
T ss_dssp BTTEEECSGGGBS----STTSHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCcEEEeEHHhcc----CccHHHHHHHHHHHHHHHHHHHHhh
Confidence 3789999998752 6788999999999999999876543
No 485
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=88.32 E-value=0.37 Score=43.97 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=31.1
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGV-ETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~~ 83 (462)
...|+|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3479999999999999999999999 899999886
No 486
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=88.01 E-value=0.092 Score=45.56 Aligned_cols=34 Identities=18% Similarity=0.223 Sum_probs=31.0
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.+.|.|||+|-.|..+|..|.+.|++|++++|.+
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 52 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNP 52 (201)
Confidence 3579999999999999999999999999998875
No 487
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=88.13 E-value=0.41 Score=44.42 Aligned_cols=32 Identities=31% Similarity=0.508 Sum_probs=29.1
Q ss_pred cEEEECCchHHHHHHHHHHHCCC-cEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGV-ETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~~ 83 (462)
+|.|||+|-.|..+|..|+..|+ +++++|.+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 48999999999999999998888 699999875
No 488
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=88.11 E-value=0.54 Score=42.25 Aligned_cols=32 Identities=31% Similarity=0.562 Sum_probs=30.4
Q ss_pred cEEEECCchHHHHHHHHHHHCCC-cEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGV-ETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~~ 83 (462)
.|+|+|+|-+|.+++..|.+.|. +|+|+.|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 79999999999999999999998 899999976
No 489
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=87.98 E-value=0.53 Score=42.50 Aligned_cols=32 Identities=34% Similarity=0.513 Sum_probs=30.3
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.|+|||+|-.|...|..|.+.|.+|++++|..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999999875
No 490
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=87.59 E-value=0.49 Score=43.77 Aligned_cols=33 Identities=24% Similarity=0.235 Sum_probs=28.4
Q ss_pred ccEEEECC-chHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGG-GPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGg-G~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..|+|.|| |..|..++..|.+.|++|+++.|..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRR 36 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---
T ss_pred CeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCC
Confidence 47999998 9999999999999999999999765
No 491
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=87.47 E-value=0.45 Score=49.72 Aligned_cols=32 Identities=28% Similarity=0.449 Sum_probs=30.8
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 52 RVAVIGGGPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 52 dVvIVGgG~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
.|.|||+|..|...|..+++.|++|+++|..+
T Consensus 318 ~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 318 SVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred EEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 79999999999999999999999999999876
No 492
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=87.38 E-value=0.6 Score=43.58 Aligned_cols=33 Identities=27% Similarity=0.481 Sum_probs=30.5
Q ss_pred ccEEEECC-chHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGG-GPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGg-G~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+.|+|.|| |..|..++..|.+.|++|+++.|..
T Consensus 21 ~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 21 MRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 47999998 9999999999999999999999865
No 493
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=87.33 E-value=0.48 Score=43.57 Aligned_cols=33 Identities=24% Similarity=0.307 Sum_probs=29.1
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC--cEEEEcCCC
Q 012488 51 LRVAVIGGGPAGGAAAETLAKNGV--ETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGgG~aGl~~A~~L~~~g~--~v~v~E~~~ 83 (462)
++|.|||+|-.|.++|+.|+.+++ +++++|...
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~ 35 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 479999999999999999988775 799999765
No 494
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=87.20 E-value=0.88 Score=43.43 Aligned_cols=35 Identities=23% Similarity=0.342 Sum_probs=31.8
Q ss_pred CCccEEEECC-chHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 49 RNLRVAVIGG-GPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 49 ~~~dVvIVGg-G~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
+.+.|+|.|| |..|..++..|.+.|++|+++.|..
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 63 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKK 63 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCC
Confidence 3457999999 9999999999999999999999876
No 495
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=87.20 E-value=0.62 Score=43.00 Aligned_cols=33 Identities=30% Similarity=0.631 Sum_probs=30.6
Q ss_pred ccEEEECC-chHHHHHHHHHHHCCCcEEEEcCCC
Q 012488 51 LRVAVIGG-GPAGGAAAETLAKNGVETFLIERKL 83 (462)
Q Consensus 51 ~dVvIVGg-G~aGl~~A~~L~~~g~~v~v~E~~~ 83 (462)
..|+|.|| |..|..++..|.+.|++|+++.|.+
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSI 36 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 57999995 9999999999999999999999984
No 496
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=87.15 E-value=0.49 Score=44.82 Aligned_cols=34 Identities=32% Similarity=0.583 Sum_probs=30.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGV-ETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~~ 83 (462)
...|+|||+|-.|+.+|..|++.|+ +++|+|.+.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 3579999999999999999999998 689999775
No 497
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=87.10 E-value=0.48 Score=45.28 Aligned_cols=34 Identities=29% Similarity=0.436 Sum_probs=31.7
Q ss_pred CccEEEECC-chHHHHHHHHHHHCCC---cEEEEcCCC
Q 012488 50 NLRVAVIGG-GPAGGAAAETLAKNGV---ETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGg-G~aGl~~A~~L~~~g~---~v~v~E~~~ 83 (462)
+.+|+|+|| |.+|+.++..+...|. +|+++|++.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~ 251 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKE 251 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccc
Confidence 568999999 9999999999999998 999999875
No 498
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=86.90 E-value=0.65 Score=42.49 Aligned_cols=34 Identities=26% Similarity=0.328 Sum_probs=30.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEcCCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGV-ETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~~ 83 (462)
...|+|+|+|-+|.+++..|++.|. +|+|+.|..
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 3479999999999999999999999 699998875
No 499
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=86.85 E-value=0.64 Score=43.22 Aligned_cols=33 Identities=30% Similarity=0.431 Sum_probs=30.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEcCC
Q 012488 50 NLRVAVIGGGPAGGAAAETLAKNGV-ETFLIERK 82 (462)
Q Consensus 50 ~~dVvIVGgG~aGl~~A~~L~~~g~-~v~v~E~~ 82 (462)
...|+|+|+|-+|.++|..|++.|. +|+|+.|.
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 3579999999999999999999999 89999987
No 500
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=86.77 E-value=0.49 Score=44.31 Aligned_cols=34 Identities=29% Similarity=0.289 Sum_probs=29.9
Q ss_pred CccEEEECC-chHHHHHHHHHHHCCC-------cEEEEcCCC
Q 012488 50 NLRVAVIGG-GPAGGAAAETLAKNGV-------ETFLIERKL 83 (462)
Q Consensus 50 ~~dVvIVGg-G~aGl~~A~~L~~~g~-------~v~v~E~~~ 83 (462)
+++|+|+|| |..|..++..|.+.|+ +|+++|+.+
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~ 45 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ 45 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC
Confidence 357999998 9999999999999986 899999753
Done!