Citrus Sinensis ID: 012488


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460--
MASMALKSFTGLRQSPQEQQHPHFIAQALPRQQKFRVSAAKTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI
cccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccHHHHHHHHHHHHccccEEEEEccccccccccccccHHHHcccccccHHHHHEEEEEEEECccccEEEcccccccccEEEEEEcHHHHHHHHHHHHHcccEEEccEEEEEEccccccccEEEEEECccccccccccEEEEEEcEEEEcccccHHHHHHccccccccEEEEEEEEEcccccccccccEEEEEEcccccccCEEEEcccccccEEEEEECccccccHHHHHHHHHHHHccccccCEEEEEEEECccccccccccccEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccccccHHHHHccccccccHHHHHHHHHHHHHHHHcHHHHHHHHcccc
************************************************RNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKL**
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MASMALKSFTGLRQSPQEQQHPHFIAQALPRQQKFRVSAAKTSPKLTNRNLRVAVIGGGPAGGAAAETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKRTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Geranylgeranyl diphosphate reductase, chloroplastic Catalyzes the reduction of geranylgeranyl diphosphate to phytyl diphosphate, providing phytol for both tocopherol and chlorophyll synthesis.confidentQ6Z2T6
Geranylgeranyl diphosphate reductase, chloroplastic Catalyzes the reduction of geranylgeranyl diphosphate to phytyl diphosphate, providing phytol for both tocopherol and chlorophyll synthesis.confidentQ9CA67
Geranylgeranyl diphosphate reductase, chloroplastic Catalyzes the reduction of geranylgeranyl diphosphate to phytyl diphosphate, providing phytol for both tocopherol and chlorophyll synthesis.probableQ9ZS34

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.3.-.-Acting on the CH-CH group of donors.probable
1.3.1.-10-hydroxytaxane O-acetyltransferase.probable
1.3.1.83Geranylgeranyl diphosphate reductase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3I3L, chain A
Confidence level:very confident
Coverage over the Query: 50-393
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Template: 3OZ2, chain A
Confidence level:very confident
Coverage over the Query: 50-434
View the alignment between query and template
View the model in PyMOL
Template: 2GMH, chain A
Confidence level:confident
Coverage over the Query: 48-459
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View the model in PyMOL
Template: 3PID, chain A
Confidence level:probable
Coverage over the Query: 49-83
View the alignment between query and template
View the model in PyMOL