Query 012489
Match_columns 462
No_of_seqs 147 out of 1249
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 10:26:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012489.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012489hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 3.2E-77 1.1E-81 615.1 44.6 415 5-453 2-434 (439)
2 2bgh_A Vinorine synthase; VS, 100.0 3.1E-72 1E-76 575.0 34.2 402 9-462 3-416 (421)
3 2xr7_A Malonyltransferase; xen 100.0 1.1E-71 3.7E-76 576.6 30.1 407 11-453 2-444 (453)
4 2e1v_A Acyl transferase; BAHD 100.0 2.4E-71 8.1E-76 574.1 26.2 408 8-453 4-444 (454)
5 2rkv_A Trichothecene 3-O-acety 100.0 6.8E-65 2.3E-69 525.6 35.2 405 29-462 4-448 (451)
6 1q9j_A PAPA5, polyketide synth 99.1 2.5E-08 8.5E-13 100.7 25.4 279 27-360 5-313 (422)
7 2jgp_A Tyrocidine synthetase 3 98.6 4.5E-06 1.5E-10 86.7 22.3 272 27-360 94-400 (520)
8 4hvm_A Tlmii; PSI-biology, mid 98.5 9.8E-06 3.3E-10 83.5 21.1 280 27-360 11-327 (493)
9 1l5a_A Amide synthase, VIBH; n 98.5 1.1E-05 3.8E-10 81.6 20.3 238 61-360 34-304 (436)
10 2xhg_A Tyrocidine synthetase A 98.4 2.8E-05 9.7E-10 79.2 22.3 285 26-362 14-337 (466)
11 2vsq_A Surfactin synthetase su 98.1 0.0003 1E-08 81.1 23.0 250 61-360 48-327 (1304)
12 3fot_A 15-O-acetyltransferase; 97.8 0.0022 7.6E-08 66.3 21.3 266 58-360 71-399 (519)
13 3cla_A Type III chloramphenico 71.4 2.7 9.1E-05 37.7 3.4 44 141-184 163-209 (213)
14 2i9d_A Chloramphenicol acetylt 71.0 2.8 9.7E-05 37.6 3.5 43 141-183 171-216 (217)
15 1q23_A Chloramphenicol acetylt 70.0 3 0.0001 37.6 3.4 43 142-184 168-213 (219)
16 3b8k_A PDCE2;, dihydrolipoylly 67.9 3.6 0.00012 37.5 3.6 30 156-185 204-233 (239)
17 3rqc_A Probable lipoamide acyl 66.2 3.4 0.00012 37.3 3.0 30 156-185 187-216 (224)
18 1scz_A E2, dihydrolipoamide su 66.2 3.9 0.00013 37.1 3.4 30 156-185 196-225 (233)
19 1dpb_A Dihydrolipoyl-transacet 66.1 3.9 0.00013 37.4 3.4 30 156-185 208-237 (243)
20 2ii3_A Lipoamide acyltransfera 64.6 4.3 0.00015 37.6 3.4 30 156-185 224-253 (262)
21 3mae_A 2-oxoisovalerate dehydr 59.1 6.2 0.00021 36.3 3.4 30 156-185 210-239 (256)
22 3l60_A Branched-chain alpha-ke 57.5 6.9 0.00024 35.9 3.4 30 156-185 205-234 (250)
23 2kl8_A OR15; structural genomi 53.5 37 0.0013 23.6 5.7 36 61-96 11-47 (85)
24 4hhu_A OR280; engineered prote 47.8 25 0.00087 27.7 4.7 44 47-96 85-129 (170)
25 4hhu_A OR280; engineered prote 44.6 25 0.00087 27.7 4.2 44 47-96 4-48 (170)
26 3dva_I Dihydrolipoyllysine-res 38.6 6.5 0.00022 39.1 0.0 30 156-185 391-420 (428)
27 2xl1_A Arginine attenuator pep 38.4 24 0.00082 19.1 2.2 20 276-295 5-24 (26)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=3.2e-77 Score=615.08 Aligned_cols=415 Identities=26% Similarity=0.395 Sum_probs=340.8
Q ss_pred ccCCCCcEEEEeEEeeCCCCCCCceeeCCCCCcCccccCceeeEEEEcCCCCChhHHHHHHHHHHHHHhhhCCCCCceEE
Q 012489 5 SSALSAPALVSKCTVLPEQKSNLGDLKLSVSDLPMLSCHYIQKGCLFTRPPFPIDYLISLLKKSLSQTLSHFPPLAGRFT 84 (462)
Q Consensus 5 ~~~~~~v~~~~~~~V~P~~~~~~~~~~LS~lD~~~~~~~~~~~~~~f~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~ 84 (462)
.|+.++|+|+++++|+|+.+++.+.++||+||+.+. ..|++.++||+.++.+....+++||+||+++|++||+|||||+
T Consensus 2 ~m~~~~V~i~~~~~V~P~~~tp~~~~~LS~lD~~~~-~~~~~~~~~y~~~~~~~~~~~~~Lk~sLs~~L~~f~plAGRl~ 80 (439)
T 4g22_A 2 AMGSMKIEVKESTMVRPAQETPGRNLWNSNVDLVVP-NFHTPSVYFYRPTGSSNFFDAKVLKDALSRALVPFYPMAGRLK 80 (439)
T ss_dssp ----CCEEEEEEEEECCSSCCCCCEECCCHHHHSCC-TTCCCEEEEECCCSCTTTTCHHHHHHHHHHHTTTTGGGGCEEE
T ss_pred CCCceEEEEeeeEEEeCCCCCCCCeecCChhHhCcc-ccceeeEEEEcCCCCccccHHHHHHHHHHHHHhhccccceeee
Confidence 366789999999999999999999999999999875 4699999999875432234689999999999999999999999
Q ss_pred eCCCCcEEEEeCCCCceEEEEEcCCcccccccCCCCCch-hhhhcccCCCCCCCCCCCCCeEEEEEEEec-CcEEEEecc
Q 012489 85 TDSDGYIYITSNDAGVDFIHKNATVWSVRDILSPVHVPE-NVKSFFALDRTVSYEGHYRPILIVQVTELA-DGVFIGCAM 162 (462)
Q Consensus 85 ~~~~G~~~i~~~~~gv~f~~a~~~~~~l~~l~~~~~~p~-~~~~l~p~~~~~~~~~~~~Pll~vQvt~~~-gG~~l~~~~ 162 (462)
.+++|+++|+||++||.|+|++++ ++++|+... . |. .+++|+|..... ....+.|++.+|||+|+ ||++||+++
T Consensus 81 ~~~~g~~~i~c~~~Gv~fv~A~~d-~~l~~l~~~-~-p~~~~~~l~p~~~~~-~~~~~~pll~vQvT~f~cGG~~lg~~~ 156 (439)
T 4g22_A 81 RDEDGRIEIECNGEGVLFVEAESD-GVVDDFGDF-A-PTLELRRLIPAVDYS-QGISSYALLVLQVTYFKCGGVSLGVGM 156 (439)
T ss_dssp ECTTSCEEEECCCCCEEEEEEEES-SCGGGGTTC-C-CCGGGGGGSCCCCTT-SCTTSSCSEEEEEEECTTSCEEEEEEE
T ss_pred eCCCCCEEEEECCCCCEEEEEEcC-CcHHHhcCC-C-CCHHHHhcCCCCCcc-cccccCceeEEEEEEecCCCEEEEEEe
Confidence 998899999999999999999998 899998653 2 32 467787743321 11246899999999999 999999999
Q ss_pred cccccchhhHHHHHHHHHHHhcCCCCCCCCCCCCcCCC--CCCCc-cccCCCCCCcccc--------CCC-CCceEEEEe
Q 012489 163 NHAVADGTSFWNFFNTFAELTKGIKKISKQPEFSRDSV--LVSPA-VLMIPDGGLKVTF--------DEN-EPLSERIFS 230 (462)
Q Consensus 163 ~H~v~Dg~g~~~fl~~wa~~~rg~~~~~~~P~~dr~~~--~~~p~-~~p~~~~~~~~~~--------~~~-~~~~~~~f~ 230 (462)
||.++||.|+.+|+++||++|||.. .+.+|.+||+.+ ..+|. ..+..++.+.... ... .++..++|+
T Consensus 157 ~H~v~Dg~~~~~Fl~~wa~~~rg~~-~~~~P~~dr~~l~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 235 (439)
T 4g22_A 157 RHHAADGFSGLHFINSWSDMARGLD-VTLPPFIDRTLLRARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIFK 235 (439)
T ss_dssp CTTTCCHHHHHHHHHHHHHHHTTCC-CSSCCBCCGGGGCCCSSCCCSSCCGGGSCCC---------------CEEEEEEE
T ss_pred eeccCcHHHHHHHHHHHHHHhCCCC-CCCCCccccccccCCCCCCCCcCcccccCCCCCcccccccccCCcccceEEEEE
Confidence 9999999999999999999999964 456799999642 12221 1111111110000 111 467899999
Q ss_pred eCHHHHHHHHHHhccccccCCCCchhHHhhcccCCccccccccCCCCCcChHHHHHHHHHHHhhhhcCCCCCCceEEEEE
Q 012489 231 FSRESILKLKARVNNNKWIDNGHVDAVELLGKQSNDTYWLKKTESNGEISSFQSLSALLWRAVTRARKLHVNKMTTFRMA 310 (462)
Q Consensus 231 ~~~~~l~~Lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~St~d~l~AllW~~~~~Ar~~~~~~~~~l~~~ 310 (462)
|++++|++||+++..+ .+..++|+||+|+|++|+|++|||++.+++.+.+.++
T Consensus 236 fs~~~i~~LK~~a~~~---------------------------~~~~~~St~dal~A~iWr~~~rAr~~~~~~~~~l~~~ 288 (439)
T 4g22_A 236 LTREQISALKAKSKED---------------------------GNTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIA 288 (439)
T ss_dssp ECHHHHHHHHHGGGGG---------------------------GCCCCCCHHHHHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred ECHHHHHHHHHHhhcc---------------------------CCCCCccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEE
Confidence 9999999999998742 1246799999999999999999999888899999999
Q ss_pred eccCCcCCCCCCCCCcccccccccccccccccccCCHHHHHHHHHHhhhhCChHHHHHHHHHHhcCCccccCCC----CC
Q 012489 311 VNCRHRLNPKLDPLYFGNAIQSIPTYASAGDVLSKDLRWCAEQLNKNVNAHDDKTVRRFVEDWESNPRVFPLGN----FD 386 (462)
Q Consensus 311 vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~ai~~~~~~~~~~~i~~~~~~~~~~~~~~----~~ 386 (462)
||+|+|++||+|++||||++..+.+.++++||.+++|+++|..||++|+++|++++++.++.++..++...+.. +.
T Consensus 289 vd~R~rl~Pplp~~Y~GN~v~~~~~~~~~~el~~~~L~~~A~~Ir~ai~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (439)
T 4g22_A 289 TDGRARLRPSLPPGYFGNVIFTATPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALDYLELQPDLKALVRGAHTFK 368 (439)
T ss_dssp EECTTTSSSCCCTTBCSCCEEEECCEEEHHHHHHSCHHHHHHHHHHHHHTCSHHHHHHHHHHHHTCSCSTTCCCCHHHHC
T ss_pred EcccCCCCCCCCCCcccceeehhhcceEHHHHhhCcHHHHHHHHHHHHHhhCHHHHHHHHHHHHhCccchhhcccCCcCc
Confidence 99999999999999999999999999999999999999999999999999999999999876655543222211 12
Q ss_pred CCcEEEecCCCCCCCCCCcCCCccceEeeCCCCCCCceEEEecCCCCCCcEEEEEEcCHHHHHhhhc
Q 012489 387 GASITMGSSPRFPMYDNDFGWGRPLAVRSGKANKFDGKISAFPGREGGGTVDLEVILAPETMAGIES 453 (462)
Q Consensus 387 ~~~~~~ssw~~~~~~~~DFG~G~P~~~~~~~~~~~~g~v~i~p~~~~~~~~~v~v~L~~~~m~~l~~ 453 (462)
...+.+|||+++++|++|||||+|.++++.. ...+|.++++|+++++||++|.|+|++++|++|++
T Consensus 369 ~~~~~vssw~r~~~y~~DFGwGkP~~~~~~~-~~~~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~ 434 (439)
T 4g22_A 369 CPNLGITSWVRLPIHDADFGWGRPIFMGPGG-IAYEGLSFILPSPTNDGSMSVAISLQGEHMKLFQS 434 (439)
T ss_dssp TTCEEEEECTTSCTTCCCCSSCCCSEEEESS-CCSTTEEEEEECTTCSSCEEEEEEEEHHHHHHHHH
T ss_pred CCcEEEeecCcCCccccccCCCCcceeeccc-cCCCcEEEEeecCCCCCcEEEEEECCHHHHHHHHH
Confidence 4679999999999999999999999999864 34689999999988789999999999999999986
No 2
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=3.1e-72 Score=575.00 Aligned_cols=402 Identities=24% Similarity=0.315 Sum_probs=327.2
Q ss_pred CCcEEEEeEEeeCCCCCCC--ceeeCCCCCcCccccCceeeEEEEcCCCC---ChhHHHHHHHHHHHHHhhhCCCCCceE
Q 012489 9 SAPALVSKCTVLPEQKSNL--GDLKLSVSDLPMLSCHYIQKGCLFTRPPF---PIDYLISLLKKSLSQTLSHFPPLAGRF 83 (462)
Q Consensus 9 ~~v~~~~~~~V~P~~~~~~--~~~~LS~lD~~~~~~~~~~~~~~f~~~~~---~~~~~~~~L~~sL~~~L~~~p~LaGrl 83 (462)
|+|+|+++++|+|+.+++. +.++||+||+.+. ..|++.++||+.++. +.+..+++||+||+++|++||+|||||
T Consensus 3 m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~-~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl 81 (421)
T 2bgh_A 3 PQMEKVSEELILPSSPTPQSLKCYKISHLDQLLL-TCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLTHFYPLAGRI 81 (421)
T ss_dssp -CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSC-SSEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTTTSGGGGSEE
T ss_pred ceEEEeeeEEEeCCCCCCCCCcccCCChHHhccc-ccccceEEEEeCCCccccchhhHHHHHHHHHHHHhhhcchhcccc
Confidence 6899999999999998774 4999999999865 479999999987542 355789999999999999999999999
Q ss_pred EeCCCCcEEEEeCCCCceEEEEEcCCcccccccCCCCCchhhhhcccCCCCCC--CCCCCCCeEEEEEEEec-CcEEEEe
Q 012489 84 TTDSDGYIYITSNDAGVDFIHKNATVWSVRDILSPVHVPENVKSFFALDRTVS--YEGHYRPILIVQVTELA-DGVFIGC 160 (462)
Q Consensus 84 ~~~~~G~~~i~~~~~gv~f~~a~~~~~~l~~l~~~~~~p~~~~~l~p~~~~~~--~~~~~~Pll~vQvt~~~-gG~~l~~ 160 (462)
+. +++|+|+++||.|++++++ ++++++......+..++.|+|...... +...+.|++.+|||+|+ ||++||+
T Consensus 82 ~~----~~~i~c~~~Gv~fv~A~~d-~~l~~~~~~~p~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvt~f~cgG~~lg~ 156 (421)
T 2bgh_A 82 NV----NSSVDCNDSGVPFVEARVQ-AQLSQAIQNVVELEKLDQYLPSAAYPGGKIEVNEDVPLAVKISFFECGGTAIGV 156 (421)
T ss_dssp ET----TTEEECCCCCEEEEEEEES-SCHHHHHSCCSSGGGGGGGSSSCSSSSSSSCCCTTCSEEEEEEECTTSCEEEEE
T ss_pred CC----CcEEEEcCCceEEEEEEEc-CCHHHHhccCCChHHHHhcCCCCCCccccccccCCceEEEEEEEEcCCCEEEEE
Confidence 62 5899999999999999998 899998653122235677887652110 11346899999999999 9999999
Q ss_pred cccccccchhhHHHHHHHHHHHhcCCCCCCCCCCCCc-CCCCCCC-ccccCCCCCCccccCCCCCceEEEEeeCHHHHHH
Q 012489 161 AMNHAVADGTSFWNFFNTFAELTKGIKKISKQPEFSR-DSVLVSP-AVLMIPDGGLKVTFDENEPLSERIFSFSRESILK 238 (462)
Q Consensus 161 ~~~H~v~Dg~g~~~fl~~wa~~~rg~~~~~~~P~~dr-~~~~~~p-~~~p~~~~~~~~~~~~~~~~~~~~f~~~~~~l~~ 238 (462)
++||.++||.|+.+|+++||++|||.... ..|.+|| .. +.++ ...|.. .+....++..++|+|++++|++
T Consensus 157 ~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~-~~P~~dr~~~-l~p~~~~~~~~------~~~~~~~~~~~~f~f~~~~i~~ 228 (421)
T 2bgh_A 157 NLSHKIADVLSLATFLNAWTATCRGETEI-VLPNFDLAAR-HFPPVDNTPSP------ELVPDENVVMKRFVFDKEKIGA 228 (421)
T ss_dssp EEETTTCCHHHHHHHHHHHHHHHTTCSCC-CCCBCSHHHH-HSCCCTTCCCC------CCCCCSSEEEEEEEECHHHHHH
T ss_pred EeeEEechHHHHHHHHHHHHHHhcCCCCC-CCCccccccc-cCCCcccCCCC------ccCCccceEEEEEEECHHHHHH
Confidence 99999999999999999999999996433 5788998 55 3332 222220 1113456789999999999999
Q ss_pred HHHHhccccccCCCCchhHHhhcccCCccccccccCCCCCcChHHHHHHHHHHHhhhhcCC--CCCCceEEEEEeccCCc
Q 012489 239 LKARVNNNKWIDNGHVDAVELLGKQSNDTYWLKKTESNGEISSFQSLSALLWRAVTRARKL--HVNKMTTFRMAVNCRHR 316 (462)
Q Consensus 239 Lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~St~d~l~AllW~~~~~Ar~~--~~~~~~~l~~~vd~R~r 316 (462)
||+++.++ ....++|+||+|+|++|+|+++||+. .+++.+.+.++||+|+|
T Consensus 229 LK~~a~~~---------------------------~~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~r 281 (421)
T 2bgh_A 229 LRAQASSA---------------------------SEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSR 281 (421)
T ss_dssp HHHHTC--------------------------------CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGG
T ss_pred HHHHhhcc---------------------------CCCCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCccc
Confidence 99998742 12257999999999999999999864 24678999999999999
Q ss_pred CCCCCCCCCcccccccccccccccccccCCHHHHHHHHHHhhhhCChHHHHHHHHHHhcCCccccCCCCCCCcEEEecCC
Q 012489 317 LNPKLDPLYFGNAIQSIPTYASAGDVLSKDLRWCAEQLNKNVNAHDDKTVRRFVEDWESNPRVFPLGNFDGASITMGSSP 396 (462)
Q Consensus 317 l~pplp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~ai~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ssw~ 396 (462)
++||+|++||||++..+.+.+++++ +++|+++|..||+++.++++++++...+..+.... .+ ....+.+|||+
T Consensus 282 l~pplP~~y~GN~~~~~~~~~~~~~--~~~l~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~vssw~ 354 (421)
T 2bgh_A 282 MNPPLPHYAMGNIATLLFAAVDAEW--DKDFPDLIGPLRTSLEKTEDDHNHELLKGMTCLYE---LE--PQELLSFTSWC 354 (421)
T ss_dssp SSSCCCTTBCSCCEEEEEEEECTTC--CCCGGGGHHHHHHHTCCCSSCHHHHHHHHHHHHHT---SC--GGGEEEEEEET
T ss_pred cCCCCCCCccceEEEEEEEEecccc--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---cC--CCCeEEEeccc
Confidence 9999999999999999988888876 77999999999999999999898876543221100 11 12468899999
Q ss_pred CCCCCCCCcCCCccceEeeCCCCCCCceEEEecCCCCCCcEEEEEEcCHHHHHhhhcChhhhhccC
Q 012489 397 RFPMYDNDFGWGRPLAVRSGKANKFDGKISAFPGREGGGTVDLEVILAPETMAGIESDHEFMQYVS 462 (462)
Q Consensus 397 ~~~~~~~DFG~G~P~~~~~~~~~~~~g~v~i~p~~~~~~~~~v~v~L~~~~m~~l~~d~~~~~~~~ 462 (462)
++++|++|||||+|.++++... ..+|.++++|++++ +|++|.|+|++++|++|++ ||.+|++
T Consensus 355 ~~~~y~~DFGwGkP~~v~~~~~-~~~g~~~~~p~~~~-~gi~v~v~L~~~~m~~f~~--e~~~~~~ 416 (421)
T 2bgh_A 355 RLGFYDLDFGWGKPLSACTTTF-PKRNAALLMDTRSG-DGVEAWLPMAEDEMAMLPV--ELLSLVD 416 (421)
T ss_dssp TSCGGGCCSSSCCCSEEECCCC-CSTTEEEEEECTTS-SSEEEEEEEEHHHHHHSCH--HHHTTBC
T ss_pred cCCCcccccCCCccCeeccccc-CcCCEEEEEecCCC-CeEEEEEEcCHHHHHHHHH--HHHHhhc
Confidence 9999999999999999998653 35899999999875 4899999999999999998 9999985
No 3
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=1.1e-71 Score=576.63 Aligned_cols=407 Identities=23% Similarity=0.372 Sum_probs=326.4
Q ss_pred cEEEEeEEeeCCCC-CCCceeeCCCCCcCccccCceeeEEEEcCCCC-C--hhHHHHHHHHHHHHHhhhCCCCCceEEeC
Q 012489 11 PALVSKCTVLPEQK-SNLGDLKLSVSDLPMLSCHYIQKGCLFTRPPF-P--IDYLISLLKKSLSQTLSHFPPLAGRFTTD 86 (462)
Q Consensus 11 v~~~~~~~V~P~~~-~~~~~~~LS~lD~~~~~~~~~~~~~~f~~~~~-~--~~~~~~~L~~sL~~~L~~~p~LaGrl~~~ 86 (462)
|+|+++++|+|+.+ ++.+.++||+||+.+.+.+|++.++||+.++. + +++++++||+||+++|++||+|||||+.+
T Consensus 2 v~v~~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~ 81 (453)
T 2xr7_A 2 ASVIEQCQVVPSPGSATELTLPLTYFDHVWLAFHRMRRILFYKLPISRPDFVQTIIPTLKDSLSLTLKYYLPLAGNVACP 81 (453)
T ss_dssp CEEEEESCCCCCTTCCSEEEEECCHHHHGGGGSCCEEEEEEEECCCCSHHHHHTHHHHHHHHHHHHHTTSGGGGSCCEEE
T ss_pred eEEEEEEEecCCCCCCCCceECCCHHHhhhhhcCCccEEEEEeCCCCCchhHHHHHHHHHHHHHHHhhhccccCeeEEcc
Confidence 89999999999987 55789999999998665569999999987542 2 44579999999999999999999999988
Q ss_pred C--CCcEEEEeC-CCCceEEEEEcCCcccccccCCCCCc-hhhhhcccCCCCCCC--CCCCCCeEEEEEEEec-CcEEEE
Q 012489 87 S--DGYIYITSN-DAGVDFIHKNATVWSVRDILSPVHVP-ENVKSFFALDRTVSY--EGHYRPILIVQVTELA-DGVFIG 159 (462)
Q Consensus 87 ~--~G~~~i~~~-~~gv~f~~a~~~~~~l~~l~~~~~~p-~~~~~l~p~~~~~~~--~~~~~Pll~vQvt~~~-gG~~l~ 159 (462)
+ +|+++|+|+ ++||.|+|++++ .+++++......| ..++.|+|..+.... ...+.|++.+|||+|+ ||++||
T Consensus 82 ~~~~g~~~i~c~~~~gv~fv~A~~~-~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cGG~~lg 160 (453)
T 2xr7_A 82 QDWSGYPELRYVTGNSVSVIFSESD-MDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHGISIG 160 (453)
T ss_dssp SSTTCCCEEEEETTCCCEEEEEECC-SCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEEETTTEEEEE
T ss_pred CCCCCCEEEEecCCCceEEEEEecC-CCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEEccCCcEEEE
Confidence 6 899999999 499999999999 8999986532222 245677775432110 0012899999999998 999999
Q ss_pred ecccccccchhhHHHHHHHHHHHhc-CC-C---CCCCCCCCCcCCCCCCCccccCCCCCC-----cc-cc---CCCCCce
Q 012489 160 CAMNHAVADGTSFWNFFNTFAELTK-GI-K---KISKQPEFSRDSVLVSPAVLMIPDGGL-----KV-TF---DENEPLS 225 (462)
Q Consensus 160 ~~~~H~v~Dg~g~~~fl~~wa~~~r-g~-~---~~~~~P~~dr~~~~~~p~~~p~~~~~~-----~~-~~---~~~~~~~ 225 (462)
+++||.++||.|+.+|+++||++|| |. . +....|.+||+. +.+|..++....+. .. .. ....+..
T Consensus 161 ~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~~~~~~~~P~~dr~~-l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (453)
T 2xr7_A 161 FTNHHVAGDGATIVKFVRAWALLNKFGGDEQFLANEFIPFYDRSV-IKDPNGVGMSIWNEMKKYKHMMKMSDVVTPPDKV 239 (453)
T ss_dssp EEECTTTCCSHHHHHHHHHHHHHHHTTTCGGGSCGGGSCBCCCSS-SCCSSCHHHHTTTTGGGCTTTSCCSCCCCCCSCC
T ss_pred EeeeeeeechhHHHHHHHHHHHHhhcCCCcccCCCCCCCcccccc-ccCCCCcchHHHHhccccCCccccccccCCCCce
Confidence 9999999999999999999999999 85 2 123468899976 33332211100000 00 00 0134567
Q ss_pred EEEEeeCHHHHHHHHHHhccccccCCCCchhHHhhcccCCccccccccCCCCCcChHHHHHHHHHHHhhhhcCC-----C
Q 012489 226 ERIFSFSRESILKLKARVNNNKWIDNGHVDAVELLGKQSNDTYWLKKTESNGEISSFQSLSALLWRAVTRARKL-----H 300 (462)
Q Consensus 226 ~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~St~d~l~AllW~~~~~Ar~~-----~ 300 (462)
.++|+|++++|++||+++.++ .....++|+||+|+|++|+|+++||+. .
T Consensus 240 ~~~f~f~~~~i~~Lk~~a~~~--------------------------~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~ 293 (453)
T 2xr7_A 240 RGTFIITRHDIGKLKNLVLTR--------------------------RPKLTHVTSFTVTCAYVWTCIIKSEAATGEEID 293 (453)
T ss_dssp CEEEEECHHHHHHHHHHHHHH--------------------------SCCCSCCCHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred EEEEEECHHHHHHHHHHHhhc--------------------------CCCCCcccHHHHHHHHHHHHHHHHhccccccCC
Confidence 899999999999999998742 111257999999999999999999975 5
Q ss_pred CCCceEEEEEeccCCcCCCCCCCCCccccccccccccccccccc-CCHHHHHHHHHHhhhh--CChH-HHHHHHHHHhcC
Q 012489 301 VNKMTTFRMAVNCRHRLNPKLDPLYFGNAIQSIPTYASAGDVLS-KDLRWCAEQLNKNVNA--HDDK-TVRRFVEDWESN 376 (462)
Q Consensus 301 ~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~l~~-~~L~~~A~~ir~ai~~--~~~~-~~~~~i~~~~~~ 376 (462)
+++.+.+.++||+|+|++||+|++||||++..+.+.++++||.+ ++|..+|..||+++++ ++++ ++++ +.++..
T Consensus 294 ~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~--~~~~~~ 371 (453)
T 2xr7_A 294 ENGMEFFGCAADCRAQFNPPLPPSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG--SWFKEY 371 (453)
T ss_dssp TTSEEEEEEECCTTSCSSSCCCTTBCSCCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS--CTTSCC
T ss_pred CCcceEEEEEecccccCCCCCCcccccceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhh--HHHHHH
Confidence 67889999999999999999999999999999999999999995 8999999999999999 5788 8876 333322
Q ss_pred CccccCCCCCCCcEEEecCCCCCCCCCCcCCCccceEeeCCCCCCCc--eEEEecCCCCCCcEEEEEEcCHHHHHhhhc
Q 012489 377 PRVFPLGNFDGASITMGSSPRFPMYDNDFGWGRPLAVRSGKANKFDG--KISAFPGREGGGTVDLEVILAPETMAGIES 453 (462)
Q Consensus 377 ~~~~~~~~~~~~~~~~ssw~~~~~~~~DFG~G~P~~~~~~~~~~~~g--~v~i~p~~~~~~~~~v~v~L~~~~m~~l~~ 453 (462)
... .....+.+|||+++++|++|||||+|.++++.... .+| .++++|+++++||++|.|+|++++|++|++
T Consensus 372 ~~~-----~~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~-~~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~~f~~ 444 (453)
T 2xr7_A 372 DKV-----DAKRSLSVAGSPKLDLYAADFGWGRPEKLEFVSID-NDDGISMSLSKSKDSDGDLEIGLSLSKTRMNAFAA 444 (453)
T ss_dssp CCS-----CGGGEEEECSCSSCCGGGCCCSSCSCSEEEEGGGS-SCSSCEEEEEECSSSTTCEEEEECCCHHHHHHHHH
T ss_pred Hhh-----ccCCcEEEeccccCCccccccCCCcceEEEeeeec-CCCceEEEEeecCCCCCCEEEEEEeCHHHHHHHHH
Confidence 221 12347889999999999999999999999976433 578 888999888889999999999999999954
No 4
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=2.4e-71 Score=574.08 Aligned_cols=408 Identities=19% Similarity=0.318 Sum_probs=322.2
Q ss_pred CCCcEEEEeEEeeCCCC-CCCceeeCCCCCcCccccCceeeEEEEcCCCC-C--hhHHHHHHHHHHHHHhhhCCCCCceE
Q 012489 8 LSAPALVSKCTVLPEQK-SNLGDLKLSVSDLPMLSCHYIQKGCLFTRPPF-P--IDYLISLLKKSLSQTLSHFPPLAGRF 83 (462)
Q Consensus 8 ~~~v~~~~~~~V~P~~~-~~~~~~~LS~lD~~~~~~~~~~~~~~f~~~~~-~--~~~~~~~L~~sL~~~L~~~p~LaGrl 83 (462)
...|+|+++++|+|+.+ ++.+.++||+||+.+.+.+|++.++||+.++. + .++.+++||+||+++|++||+|||||
T Consensus 4 ~~~v~v~~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl 83 (454)
T 2e1v_A 4 LPILTVLEQSQVSPPPDTLGDKSLQLTFFDFFWLRSPPINNLFFYELPITRSQFTETVVPNIKHSLSITLKHFYPFVGKL 83 (454)
T ss_dssp --CEEEEEEEEECCCTTSCCCEEEECCHHHHTTTTCCCEEEEEEEECCCCHHHHHHTHHHHHHHHHHHHHTTCGGGGSEE
T ss_pred CceEEEEEEEEEeCCCCCCCCceecCchHHhhhhccCCccEEEEEeCCCCcchhhHHHHHHHHHHHHHHhhhccccceee
Confidence 37899999999999987 56789999999998655569999999987542 2 34578999999999999999999999
Q ss_pred E-eC-CCCcEEEEeC-CCCceEEEEEcCCcccccccCCCCCch-hhhhcccCCCCCC--CCCCCCCeEEEEEEEec-CcE
Q 012489 84 T-TD-SDGYIYITSN-DAGVDFIHKNATVWSVRDILSPVHVPE-NVKSFFALDRTVS--YEGHYRPILIVQVTELA-DGV 156 (462)
Q Consensus 84 ~-~~-~~G~~~i~~~-~~gv~f~~a~~~~~~l~~l~~~~~~p~-~~~~l~p~~~~~~--~~~~~~Pll~vQvt~~~-gG~ 156 (462)
+ .+ ++|+++|+|+ ++||.|+|++++ .+++++......|. .++.|+|..+... ....+.|++.+|||+|+ ||+
T Consensus 84 ~~~~~~~g~~~i~c~~~~gv~fv~A~~~-~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cgG~ 162 (454)
T 2e1v_A 84 VVYPAPTKKPEICYVEGDSVAVTFAECN-LDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLFPNQGI 162 (454)
T ss_dssp EECSSSSSCCEEEECTTCCEEEEEEEEC-SCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEEETTTEE
T ss_pred eeccCCCCCEEEEECCCCcEEEEEEEeC-CCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEEecCCcE
Confidence 8 65 6899999999 499999999998 89999865322122 4567777543211 11134599999999998 999
Q ss_pred EEEecccccccchhhHHHHHHHHHHHhc-CCC-----CCCCCCCCCcCCCCCCCccccCC---CC-C-C------ccccC
Q 012489 157 FIGCAMNHAVADGTSFWNFFNTFAELTK-GIK-----KISKQPEFSRDSVLVSPAVLMIP---DG-G-L------KVTFD 219 (462)
Q Consensus 157 ~l~~~~~H~v~Dg~g~~~fl~~wa~~~r-g~~-----~~~~~P~~dr~~~~~~p~~~p~~---~~-~-~------~~~~~ 219 (462)
+||+++||.++||.|+.+|+++||++|| |.. ++...|.+|| . +..|. +... .+ . . .....
T Consensus 163 ~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~~~P~~dr-~-l~~p~-~~~~~~~~~~~~~~~~~~~~~~~~ 239 (454)
T 2e1v_A 163 AIGITNHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGTRPLYDR-I-IKYPM-LDEAYLKRAKVESFNEDYVTQSLA 239 (454)
T ss_dssp EEEEEECGGGCCHHHHHHHHHHHHHHHHTTSCCHHHHHHSCCCBCCC-C-CCCHH-HHHHHHHHTTCTTHHHHCCCCCCC
T ss_pred EEEEEeeeeecchhHHHHHHHHHHHHhccCCCccccCCCCCCCcccc-c-CCCCC-cchHHHHhhhccccccccCcccCC
Confidence 9999999999999999999999999999 852 1245689999 5 43321 1100 00 0 0 00011
Q ss_pred CCCCceEEEEeeCHHHHHHHHHHhccccccCCCCchhHHhhcccCCccccccccCCCCCcChHHHHHHHHHHHhhhhcCC
Q 012489 220 ENEPLSERIFSFSRESILKLKARVNNNKWIDNGHVDAVELLGKQSNDTYWLKKTESNGEISSFQSLSALLWRAVTRARKL 299 (462)
Q Consensus 220 ~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~St~d~l~AllW~~~~~Ar~~ 299 (462)
...+...++|+|++++|++||+++.++ .....++|+||+|+|++|+|+++||
T Consensus 240 ~~~~~~~~~f~f~~~~i~~LK~~a~~~--------------------------~~~~~~~St~d~l~A~lWr~~~~Ar-- 291 (454)
T 2e1v_A 240 GPSDKLRATFILTRAVINQLKDRVLAQ--------------------------LPTLEYVSSFTVACAYIWSCIAKSR-- 291 (454)
T ss_dssp CCCCEEEEEEEECHHHHHHHHHHHHHH--------------------------CTTCSCCCHHHHHHHHHHHHHHHHH--
T ss_pred CCCCceEEEEEECHHHHHHHHHHHhhc--------------------------CCCCCcccHHHHHHHHHHHHHhhhc--
Confidence 234567899999999999999998742 1112579999999999999999999
Q ss_pred CCCCceEEEEEeccCCcCCCCCCCCCccccccccccccccccccc-CCHHHHHHHHHHhhhhCChHHHHHHH----HHHh
Q 012489 300 HVNKMTTFRMAVNCRHRLNPKLDPLYFGNAIQSIPTYASAGDVLS-KDLRWCAEQLNKNVNAHDDKTVRRFV----EDWE 374 (462)
Q Consensus 300 ~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~l~~-~~L~~~A~~ir~ai~~~~~~~~~~~i----~~~~ 374 (462)
+++.+.+.++||+|+|++||+|++||||++..+.+.++++||.+ ++|..+|..||+++++++++|+++.+ ..|.
T Consensus 292 -~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~~~~~~~ 370 (454)
T 2e1v_A 292 -NDKLQLFGFPIDRRARMKPPIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDDMESFN 370 (454)
T ss_dssp -CCSEEEEEEEEECGGGSSSCCCTTBCSCCEEEEEEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-----C
T ss_pred -CCCceEEEEEecchhccCCCCCcccccceeeeEEeecchhhccccccHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999995 89999999999999998755544322 1222
Q ss_pred cCCccccCCCCCCCcEEEecCCCCCCCCCCcCCCccceEeeCCCCCCCceEEEecCCCCCCcEEEEEEcCHHHHHhhhc
Q 012489 375 SNPRVFPLGNFDGASITMGSSPRFPMYDNDFGWGRPLAVRSGKANKFDGKISAFPGREGGGTVDLEVILAPETMAGIES 453 (462)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~ssw~~~~~~~~DFG~G~P~~~~~~~~~~~~g~v~i~p~~~~~~~~~v~v~L~~~~m~~l~~ 453 (462)
+... .+ .....+.+|||+++++|++|||||+|.++++.... .+|.++++|+++++||++|.|+|++++|++|++
T Consensus 371 ~~~~--~~--~~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~-~~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f~~ 444 (454)
T 2e1v_A 371 DLVS--EG--MPTTMTWVSGTPKLRFYDMDFGWGKPKKLETVSID-HNGAISINSCKESNEDLEIGVCISATQMEDFVH 444 (454)
T ss_dssp HHHH--HC--CCSEEEEEECCTTSCGGGCCSSSCSCSEEEEGGGG-GSSEEEEEECSSCTTSEEEEEEEEHHHHHHHHH
T ss_pred HHHH--hh--cCCceEEEecCCCCCcccccccCccceEEEeeeeC-CCCeEEEEecCCCCCCEEEEEEECHHHHHHHHH
Confidence 1100 01 12347899999999999999999999999976433 579999999988889999999999999999953
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=6.8e-65 Score=525.59 Aligned_cols=405 Identities=17% Similarity=0.229 Sum_probs=309.9
Q ss_pred eeeCCCCCcCcc-ccCceeeEEEEcCCCC-ChhHHHHHHHHHHHHHhhhCCCCCceEEeCC-----CCcEEEEeCCCCce
Q 012489 29 DLKLSVSDLPML-SCHYIQKGCLFTRPPF-PIDYLISLLKKSLSQTLSHFPPLAGRFTTDS-----DGYIYITSNDAGVD 101 (462)
Q Consensus 29 ~~~LS~lD~~~~-~~~~~~~~~~f~~~~~-~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~-----~G~~~i~~~~~gv~ 101 (462)
.++||.+||.++ ...|++.++||+.++. +.++++++||+||+++|++||+|||||+.++ +|+++|+|++.+..
T Consensus 4 ~~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~~~~~ 83 (451)
T 2rkv_A 4 KIQLDTLGQLPGLLSIYTQISLLYPVSDSSQYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFEDVPR 83 (451)
T ss_dssp CEECCGGGGCTTGGGCEEEEEEEEECSCGGGHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCCSSCE
T ss_pred cccCChhhcCccccccceeEEEEEECCCCCCHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecCCCCe
Confidence 469999999862 2469999999986432 3567899999999999999999999998864 68999998776666
Q ss_pred EEEEEcCC----cccccccCCCCCch-hh--hhcccCCCCC-C---CCCCCCCeEEEEEEEecCcEEEEecccccccchh
Q 012489 102 FIHKNATV----WSVRDILSPVHVPE-NV--KSFFALDRTV-S---YEGHYRPILIVQVTELADGVFIGCAMNHAVADGT 170 (462)
Q Consensus 102 f~~a~~~~----~~l~~l~~~~~~p~-~~--~~l~p~~~~~-~---~~~~~~Pll~vQvt~~~gG~~l~~~~~H~v~Dg~ 170 (462)
|++++++. .+++++... +.|. .+ ..+.|..... . ....+.|++.+|||+|.||++||+++||.++||.
T Consensus 84 ~~va~~~~d~~~p~~~~l~~~-~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~~~GG~~lg~~~~H~v~Dg~ 162 (451)
T 2rkv_A 84 VVVKDLRDDPSAPTIEGMRKA-GYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFIKGGLILTVNGQHGAMDMV 162 (451)
T ss_dssp EEEEECTTCTTSCBHHHHHHH-TSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEEEBTEEEEEEEEETTTCCHH
T ss_pred EEEEeCCCCCCCCCHHHHHHc-CCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEEecCceeeeeeehhccccHH
Confidence 88888762 146665432 2232 12 1244432110 0 0123589999999988999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCCC---CCCCCCcCCCCC-----CCc-cccCCCCCCcc----ccCCCCCceEEEEeeCHHHHH
Q 012489 171 SFWNFFNTFAELTKGIKKIS---KQPEFSRDSVLV-----SPA-VLMIPDGGLKV----TFDENEPLSERIFSFSRESIL 237 (462)
Q Consensus 171 g~~~fl~~wa~~~rg~~~~~---~~P~~dr~~~~~-----~p~-~~p~~~~~~~~----~~~~~~~~~~~~f~~~~~~l~ 237 (462)
|+.+|+++||++|||...+. .+|.+||..... +|. .++...+.... ......++..++|+|++++|+
T Consensus 163 g~~~Fl~awa~~~rg~~~~~~~~~~p~~dr~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~ 242 (451)
T 2rkv_A 163 GQDAVIRLLSKACRNDPFTEEEMTAMNLDRKTIVPYLENYTIGPEVDHQIVKADVAGGDAVLTPVSASWAFFTFSPKAMS 242 (451)
T ss_dssp HHHHHHHHHHHHHHTCCCCHHHHHHTTCCSTTSSCCCTTCCCCGGGTTCBCCTTSCC-------CCEEEEEEEECHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCccccccccCchhhccccccccCCCccccccccCCCCCCCCCCCCCCCceEEEEEECHHHHH
Confidence 99999999999999963221 147788854111 111 11111111100 001234567899999999999
Q ss_pred HHHHHhccccccCCCCchhHHhhcccCCccccccccCCCCCcChHHHHHHHHHHHhhhhc-C-CCCCCceEEEEEeccCC
Q 012489 238 KLKARVNNNKWIDNGHVDAVELLGKQSNDTYWLKKTESNGEISSFQSLSALLWRAVTRAR-K-LHVNKMTTFRMAVNCRH 315 (462)
Q Consensus 238 ~Lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~St~d~l~AllW~~~~~Ar-~-~~~~~~~~l~~~vd~R~ 315 (462)
+||+++.++. .....++|+||+|+|++|+|+++|| . ..+++.+.+.++||+|+
T Consensus 243 ~LK~~a~~~~-------------------------~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~vd~R~ 297 (451)
T 2rkv_A 243 ELKDAATKTL-------------------------DASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARP 297 (451)
T ss_dssp HHHHHHHTTC-------------------------CTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEEECHH
T ss_pred HHHHHHhhhc-------------------------cCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEecccc
Confidence 9999987531 1113679999999999999999998 3 56788999999999999
Q ss_pred cCCCCCCCCCcccccccccccccccccccCCHHHHHHHHHHhhhhCChHH-HHHHHHHHhcCCcccc--CC-CC-CCCcE
Q 012489 316 RLNPKLDPLYFGNAIQSIPTYASAGDVLSKDLRWCAEQLNKNVNAHDDKT-VRRFVEDWESNPRVFP--LG-NF-DGASI 390 (462)
Q Consensus 316 rl~pplp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~ai~~~~~~~-~~~~i~~~~~~~~~~~--~~-~~-~~~~~ 390 (462)
|++ +|.+||||++..+.+.++++||.+++|+.+|..||+++.+++.++ +++.++.++..++... ++ .+ .+.++
T Consensus 298 rl~--lP~~y~GN~~~~~~~~~~~~el~~~~L~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (451)
T 2rkv_A 298 AMG--VSNNYPGLLQNMTYHNSTIGEIANESLGATASRLRSELDPASMRQRTRGLATYLHNNPDKSNVSLTADADPSTSV 375 (451)
T ss_dssp HHT--CCTTCCSCCEEEEEEEEEHHHHHHSCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCSCCTTBCTTTTCCTTTCE
T ss_pred cCC--CCCCCcccceeeecccCcHHHhccchHHHHHHHHHHHhcccCchhHHHHHHHHHhcCCCccccccccccCCCCCE
Confidence 998 899999999999999889999999999999999999999998888 9988877765443221 11 12 24569
Q ss_pred EEecCCCCCCCCCCcC--CCccceEeeCCCCCCCceEEEecCCCCCCcEEEEEEcCHHHHHhhhcChhhhhccC
Q 012489 391 TMGSSPRFPMYDNDFG--WGRPLAVRSGKANKFDGKISAFPGREGGGTVDLEVILAPETMAGIESDHEFMQYVS 462 (462)
Q Consensus 391 ~~ssw~~~~~~~~DFG--~G~P~~~~~~~~~~~~g~v~i~p~~~~~~~~~v~v~L~~~~m~~l~~d~~~~~~~~ 462 (462)
.+|||+++++|++||| ||+|.+++.+.....+|.++++|.++ +||++|.|+|++++|++|++|++|++|++
T Consensus 376 ~~ssw~~~~~y~~DFG~gwG~P~~v~~~~~~~~~g~~~~~p~~~-~ggi~v~v~L~~~~m~~f~~d~ef~~~~~ 448 (451)
T 2rkv_A 376 MLSSWAKVGLWDYDFGLGLGKPETVRRPIFEPVESLMYFMPKKP-DGEFCAALSLRDEDMDRLKADKEWTKYAQ 448 (451)
T ss_dssp EEEECTTCCGGGCCTTCSSCSCSEEECCBCSCCTTEEEECCCCT-TSCEEEEEEEEHHHHHHHHHCHHHHTTCE
T ss_pred EEeccccCCccccccCCCCCCceEEEcCCccCCCCEEEEecCCC-CCCEEEEEEeCHHHHHHHhcCHHHHhhhe
Confidence 9999999999999998 89999998654344689999998544 78999999999999999999999999985
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=99.09 E-value=2.5e-08 Score=100.66 Aligned_cols=279 Identities=15% Similarity=0.078 Sum_probs=160.7
Q ss_pred CceeeCCCCCcCcccc-CceeeEEEEcCCCCChhHHHHHHHHHHHHHhhhCCCCCceEEeCCCCcEEEEeCCCCce-EEE
Q 012489 27 LGDLKLSVSDLPMLSC-HYIQKGCLFTRPPFPIDYLISLLKKSLSQTLSHFPPLAGRFTTDSDGYIYITSNDAGVD-FIH 104 (462)
Q Consensus 27 ~~~~~LS~lD~~~~~~-~~~~~~~~f~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~G~~~i~~~~~gv~-f~~ 104 (462)
...+|||++.+.+... +++...+-++.+ . ..++|+++|.+++..+|.|--++...+++.+++........ +.+
T Consensus 5 ~~~~pls~~Q~~~~~~~y~~~~~~~l~g~---l--d~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~~~~~~ 79 (422)
T 1q9j_A 5 SVIRKLSHSEEVFAQYEVFTSMTIQLRGV---I--DVDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHSGICV 79 (422)
T ss_dssp SEEEECCHHHHHHHHTTCEEEEEEEEESC---C--CHHHHHHHHHHHHHHCGGGSEEEEECTTSSEEEEECCSSSCCCEE
T ss_pred ceeecCCHHHHHHHhcCceEEEEEEEecC---C--CHHHHHHHHHHHHHhCccceEEEEecCCcceeeeccCCCCCceEE
Confidence 4578899887754321 233444444432 1 37899999999999999999999876555555544432222 222
Q ss_pred EEcCCcccccccCCCCCchhhhhcccCCCCCCCCCCCCCeEEEEEEEec-CcEEEEecccccccchhhHHHHHHHHHHHh
Q 012489 105 KNATVWSVRDILSPVHVPENVKSFFALDRTVSYEGHYRPILIVQVTELA-DGVFIGCAMNHAVADGTSFWNFFNTFAELT 183 (462)
Q Consensus 105 a~~~~~~l~~l~~~~~~p~~~~~l~p~~~~~~~~~~~~Pll~vQvt~~~-gG~~l~~~~~H~v~Dg~g~~~fl~~wa~~~ 183 (462)
...+ +... ...+.+ .. ..++ ...|++++.+.. . ++..|.+.+||.++||.|+..|++.|.+.+
T Consensus 80 ~d~~-----~~~~----~~~~~~---~~--~~~d-~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y 143 (422)
T 1q9j_A 80 IDGT-----AATN----GSPSGN---AE--LRLD-QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDELFSRY 143 (422)
T ss_dssp EC------------------------CC--CCCC-TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHH
T ss_pred EECC-----CCCc----chhhhc---cc--CccC-CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHHHHHHH
Confidence 1111 1000 000100 00 1123 467898888877 6 679999999999999999999999999998
Q ss_pred c----CCCCCCCCC--CCCc-------CCCCC--CCcc----ccCCCC--CCccccC------CCCCceEEEEeeCHHHH
Q 012489 184 K----GIKKISKQP--EFSR-------DSVLV--SPAV----LMIPDG--GLKVTFD------ENEPLSERIFSFSRESI 236 (462)
Q Consensus 184 r----g~~~~~~~P--~~dr-------~~~~~--~p~~----~p~~~~--~~~~~~~------~~~~~~~~~f~~~~~~l 236 (462)
+ |..+...+| ..+. ..... .... ..+... .....++ .........+.++.+..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~lp~~~~~~~~~~~~~~~~~l~~~~~ 223 (422)
T 1q9j_A 144 TDAVTTGDPGPITPQPTPLSMEAVLAQRGIRKQGLSGAERFMSVMYAYEIPATETPAVLAHPGLPQAVPVTRLWLSKQQT 223 (422)
T ss_dssp HHHHHSSSCCCCCCCCCCBCHHHHHHHSSCCC-----CTTSSTTTTCC-------------CCSBCCCCEEEECCCHHHH
T ss_pred HHhhccCCCCCCCCCCCCCCHHHHHHhcCCcccccchhhhhhhhhhcccCCCcccCCCCCCCCCCCCccceEEEeCHHHH
Confidence 7 222222122 1110 00000 0000 000000 0000010 11223567899999999
Q ss_pred HHHHHHhccccccCCCCchhHHhhcccCCccccccccCCCCCcChHHHHHHHHHHHhhhhcCCCCCCceEEEEEeccCCc
Q 012489 237 LKLKARVNNNKWIDNGHVDAVELLGKQSNDTYWLKKTESNGEISSFQSLSALLWRAVTRARKLHVNKMTTFRMAVNCRHR 316 (462)
Q Consensus 237 ~~Lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~St~d~l~AllW~~~~~Ar~~~~~~~~~l~~~vd~R~r 316 (462)
++|++.|.. ..+|.+.++.|.+...+.+-+ ........+.++++.|..
T Consensus 224 ~~l~~~a~~-------------------------------~~~t~~~~l~aa~~~~l~r~~-~~~~~~v~~g~~~~~R~~ 271 (422)
T 1q9j_A 224 SDLMAFGRE-------------------------------HRLSLNAVVAAAILLTEWQLR-NTPHVPIPYVYPVDLRFV 271 (422)
T ss_dssp HHHHHHHTT-------------------------------TTCCHHHHHHHHHHHHHHHHH-TCSSCCEEEEEEEETTTT
T ss_pred HHHHHHHHH-------------------------------hCCCHHHHHHHHHHHHHHhcc-cCCCceEEEeeeeecccc
Confidence 999998873 357899999998777776542 123567889999999998
Q ss_pred CCCCCCCCCcccccccccccccccccccCCHHHHHHHHHHhhhh
Q 012489 317 LNPKLDPLYFGNAIQSIPTYASAGDVLSKDLRWCAEQLNKNVNA 360 (462)
Q Consensus 317 l~pplp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~ai~~ 360 (462)
..|+++..=+.|.+++....+++. .+.++.+++..+++.+.+
T Consensus 272 ~~~~~~~~~~~~~vG~f~n~lp~~--~~~~~~~~l~~v~~~~~~ 313 (422)
T 1q9j_A 272 LAPPVAPTEATNLLGAASYLAEIG--PNTDIVDLASDIVATLRA 313 (422)
T ss_dssp SSSCCCTTTBSCCEEEEEEEECCC--SSCCHHHHHHHHHHHHHH
T ss_pred cCCCCChhhhhhhheeeeeeeecc--CCCCHHHHHHHHHHHHHH
Confidence 765543222334444433333332 134677777877777764
No 7
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.59 E-value=4.5e-06 Score=86.70 Aligned_cols=272 Identities=11% Similarity=0.086 Sum_probs=157.0
Q ss_pred CceeeCCCCCcCc-------c--ccCceeeEEEEcCCCCChhHHHHHHHHHHHHHhhhCCCCCceEEeCCCCcE-EEEeC
Q 012489 27 LGDLKLSVSDLPM-------L--SCHYIQKGCLFTRPPFPIDYLISLLKKSLSQTLSHFPPLAGRFTTDSDGYI-YITSN 96 (462)
Q Consensus 27 ~~~~~LS~lD~~~-------~--~~~~~~~~~~f~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~G~~-~i~~~ 96 (462)
...+|||+.-+-+ + ..+.+...+-+..+ -..++|++++.+++..+|.|--++.... |.+ ++...
T Consensus 94 ~~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~-----ld~~~l~~A~~~lv~rh~~LRt~f~~~~-~~~~q~v~~ 167 (520)
T 2jgp_A 94 QAYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEGK-----LERTRVEAAFQRLIARHESLRTSFAVVN-GEPVQNIHE 167 (520)
T ss_dssp CSSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEEC-----CCHHHHHHHHHHHHHHCGGGGEEEEEET-TEEEEEECS
T ss_pred CCCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECCC-----CCHHHHHHHHHHHHHHhHhheeEEEeeC-CEEEEEECC
Confidence 4578898765421 1 11223444444432 1378999999999999999999987643 443 33333
Q ss_pred CCCceEEEEEcCCcccccccCCCCCchhhhhcccCCCCCCCCCCCCCeEEEEEEEec-CcEEEEecccccccchhhHHHH
Q 012489 97 DAGVDFIHKNATVWSVRDILSPVHVPENVKSFFALDRTVSYEGHYRPILIVQVTELA-DGVFIGCAMNHAVADGTSFWNF 175 (462)
Q Consensus 97 ~~gv~f~~a~~~~~~l~~l~~~~~~p~~~~~l~p~~~~~~~~~~~~Pll~vQvt~~~-gG~~l~~~~~H~v~Dg~g~~~f 175 (462)
+....+.....+ -+++ .+ .....-. .++-...|++++.+.... +...|.+.+||.++||.|+..|
T Consensus 168 ~~~~~~~~~~~~---~~~~------~~-~~~~~~~----~fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l 233 (520)
T 2jgp_A 168 DVPFALAYSEVT---EEEA------RE-LVSSLVQ----PFDLEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSGIL 233 (520)
T ss_dssp CCCCCCEEEECC---HHHH------HH-HHHHTCC----CCCTTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHHHH
T ss_pred CCCCceEEEeCC---HHHH------HH-HHHHhcC----CCCCCCCcceeEEEEEEcCCcEEEEEEccceeecHhHHHHH
Confidence 222222211111 0010 00 1111100 012235788888887776 5689999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCC-C-----cC---C------------CCC---CCccccCCCCCCccccCCCCCceEEEEee
Q 012489 176 FNTFAELTKGIKKISKQPEF-S-----RD---S------------VLV---SPAVLMIPDGGLKVTFDENEPLSERIFSF 231 (462)
Q Consensus 176 l~~wa~~~rg~~~~~~~P~~-d-----r~---~------------~~~---~p~~~p~~~~~~~~~~~~~~~~~~~~f~~ 231 (462)
++.+.+.+++...+..++.+ + ++ . .+. ++..+|..... . -..........+.+
T Consensus 234 ~~el~~~Y~~~~l~~~~~~~~d~~~~~~~~~~~~~~~~~~~yW~~~l~~~~~~~~lp~~~~~--~-~~~~~~~~~~~~~l 310 (520)
T 2jgp_A 234 LAEWVQLYQGDVLPELRIQYKDFAVWQQEFSQSAAFHKQEAYWLQTFADDIPVLNLPTDFTR--P-STQSFAGDQCTIGA 310 (520)
T ss_dssp HHHHHHHHTTCCCCCCSCCHHHHHHHHHHHTTSHHHHHHHHHHHHHTSSCCCCCCCCCSSCC--C-SSCCCBEEEEEEEC
T ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcChhhHHHHHHHHHHhCCCCCcCCCCCCCCC--C-CCCCCCccEEEEeC
Confidence 99999999985322111111 1 00 0 000 00112211000 0 00112234578899
Q ss_pred CHHHHHHHHHHhccccccCCCCchhHHhhcccCCccccccccCCCCCcChHHHHHHHHHHHhhhhcCCCCCCceEEEEEe
Q 012489 232 SRESILKLKARVNNNKWIDNGHVDAVELLGKQSNDTYWLKKTESNGEISSFQSLSALLWRAVTRARKLHVNKMTTFRMAV 311 (462)
Q Consensus 232 ~~~~l~~Lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~St~d~l~AllW~~~~~Ar~~~~~~~~~l~~~v 311 (462)
+.+..++|++.|.. ..+|.+.++.|.+-..+.+-.+ .....+.+++
T Consensus 311 ~~~~~~~l~~~a~~-------------------------------~~~T~~~~l~aa~a~~L~~~~~---~~dv~~g~~~ 356 (520)
T 2jgp_A 311 GKALTEGLHQLAQA-------------------------------TGTTLYMVLLAAYNVLLAKYAG---QEDIIVGTPI 356 (520)
T ss_dssp CHHHHHHHHHHHHH-------------------------------HTCCHHHHHHHHHHHHHHHHHT---CSCEEEEEEE
T ss_pred CHHHHHHHHHHHHH-------------------------------cCCCHHHHHHHHHHHHHHHhcC---CCCeEEEecc
Confidence 99999999998874 2478889998876666665443 4678999999
Q ss_pred ccCCcCCCCCCCCCcccccccccccccccccccCCHHHHHHHHHHhhhh
Q 012489 312 NCRHRLNPKLDPLYFGNAIQSIPTYASAGDVLSKDLRWCAEQLNKNVNA 360 (462)
Q Consensus 312 d~R~rl~pplp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~ai~~ 360 (462)
+.|..-+ + .+-+|+++-.....+... .+.++.+++..+++.+.+
T Consensus 357 ~gR~~~~--~-~~~vG~f~n~lplr~~~~--~~~~~~~~l~~v~~~~~~ 400 (520)
T 2jgp_A 357 TGRSHAD--L-EPIVGMFVNTLAMRNKPQ--REKTFSEFLQEVKQNALD 400 (520)
T ss_dssp CCCCSGG--G-TTCCSCCCEEEEEEECCC--TTSBHHHHHHHHHHHHHH
T ss_pred CCCCchh--h-hccEEeeeeeeeEEecCC--CCCCHHHHHHHHHHHHHH
Confidence 9997521 2 355566654443333322 134677777777777654
No 8
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.48 E-value=9.8e-06 Score=83.54 Aligned_cols=280 Identities=11% Similarity=0.004 Sum_probs=154.6
Q ss_pred CceeeCCCCCcCc-------cccCceeeEEEEcCCCCChhHHHHHHHHHHHHHhhhCCCCCceEEeCCCCcEEEEeCCCC
Q 012489 27 LGDLKLSVSDLPM-------LSCHYIQKGCLFTRPPFPIDYLISLLKKSLSQTLSHFPPLAGRFTTDSDGYIYITSNDAG 99 (462)
Q Consensus 27 ~~~~~LS~lD~~~-------~~~~~~~~~~~f~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~G~~~i~~~~~g 99 (462)
...+|||+.-+-+ +... ....+.|..+. +. ..++|+++|.+++..+|.|--++.... |.+. ......
T Consensus 11 ~~~~Pls~~Q~~~~~~~~~~~~~~-y~~~~~~~l~g-~l--d~~~L~~A~~~lv~rh~~LRt~f~~~~-~~~~-~v~~~~ 84 (493)
T 4hvm_A 11 PGLRRASFLQRGAWRWLREAPPAA-AFAARGLLGSG-RI--DDDRLAAAADEVLDAFPLLRVNFVDDD-GLWM-RTRENA 84 (493)
T ss_dssp -CEEECCHHHHHHHHHHTTSCGGG-GEEEEEEEEES-SC--CHHHHHHHHHHHHHHCGGGGEEEEESS-SEEE-EECSCC
T ss_pred CCCCCCCHHHHHHHHHHhhCCCCc-ceeEEEEEEeC-CC--CHHHHHHHHHHHHHhchhceeEEEccC-CEEE-EecCCC
Confidence 5678888765421 1111 22333444332 12 479999999999999999999998754 5555 433322
Q ss_pred ceEEEEEcCCcccccccCC-CCCchhhhhcccCCCCCCCCCCCCCeEEEEEEEec-CcEEEEecccccccchhhHHHHHH
Q 012489 100 VDFIHKNATVWSVRDILSP-VHVPENVKSFFALDRTVSYEGHYRPILIVQVTELA-DGVFIGCAMNHAVADGTSFWNFFN 177 (462)
Q Consensus 100 v~f~~a~~~~~~l~~l~~~-~~~p~~~~~l~p~~~~~~~~~~~~Pll~vQvt~~~-gG~~l~~~~~H~v~Dg~g~~~fl~ 177 (462)
..+.+.... +.... ......+......+ ++-...|++++.+.... +...|.+.+||.++||.|+..|++
T Consensus 85 ~~~~~~d~~-----~~~~~~~~~~~~~~~~~~~~----fdl~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~l~~ 155 (493)
T 4hvm_A 85 DALVRSDLR-----GHPDPQARCVELLRADRDRP----TDPERDPLVRLHLVRLSETDVVLGVVAHQMLLDARSRYMVLG 155 (493)
T ss_dssp CCEEEEECT-----TSSSHHHHHHHHHHHHHSSC----CCTTTSCSEEEEEEECSSSEEEEEEEEETTTCCHHHHHHHHH
T ss_pred CCceEEECC-----CCCchHHHHHHHHHHHhcCC----CCCCCCCeEEEEEEEECCCcEEEEEecchhhccHHHHHHHHH
Confidence 444433322 11000 00000111111111 12235689988888877 558999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCCCc-----C--CCCCCCc----------cccCCCCCCccccC-CCCCceEEEEeeCHHHHHHH
Q 012489 178 TFAELTKGIKKISKQPEFSR-----D--SVLVSPA----------VLMIPDGGLKVTFD-ENEPLSERIFSFSRESILKL 239 (462)
Q Consensus 178 ~wa~~~rg~~~~~~~P~~dr-----~--~~~~~p~----------~~p~~~~~~~~~~~-~~~~~~~~~f~~~~~~l~~L 239 (462)
.+.+.+.|...+ .+..+- . . ...+. .+... ......+ +........+.++.+..++|
T Consensus 156 ~l~~~Y~g~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~W~~~l~~~--~~l~~~~~~~~~~~~~~~~l~~~~~~~l 230 (493)
T 4hvm_A 156 AVWQAYYGRFRP--AQYRDFAEVADFHPL-DRETVRVARHRWWSRRLPAL--PVRGGDGGPVGPPETSRLRVPGSRWQAL 230 (493)
T ss_dssp HHHHHHTTCCCG--GGSBCGGGTTTCCTT-CSHHHHHHHHHHHHHHGGGS--CCCC-------CCEEEEEEEEHHHHHHH
T ss_pred HHHHHhCCCCCC--cCHHHHHHHHhhhhc-ccChhhHHHHHHHHHhccCC--CCCCCCCCCCCCCeeEEEEcCHHHHHHH
Confidence 999999886432 121111 1 0 00000 00000 0000010 11125567899999999999
Q ss_pred HHHhccccccCCCCchhHHhhcccCCccccccccCCCCCcC--hHHHHHHHHHHHhhhhcCC--------CCCCceEEEE
Q 012489 240 KARVNNNKWIDNGHVDAVELLGKQSNDTYWLKKTESNGEIS--SFQSLSALLWRAVTRARKL--------HVNKMTTFRM 309 (462)
Q Consensus 240 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S--t~d~l~AllW~~~~~Ar~~--------~~~~~~~l~~ 309 (462)
++.|.. ..+| .+.++.|.+...+.+-+.. .......+.+
T Consensus 231 ~~~a~~-------------------------------~~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv~~g~ 279 (493)
T 4hvm_A 231 TEPGGP-------------------------------LGGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSLYLST 279 (493)
T ss_dssp HCC-------------------------------------CHHHHHHHHHHHHHHHC----------------CEEEEEE
T ss_pred HHHHHH-------------------------------cCCCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCEEEEe
Confidence 887763 3467 9999999876666554110 3356789999
Q ss_pred EeccCCcCCCCCCCCCcccccccccccccccccccCCHHHHHHHHHHhhhh
Q 012489 310 AVNCRHRLNPKLDPLYFGNAIQSIPTYASAGDVLSKDLRWCAEQLNKNVNA 360 (462)
Q Consensus 310 ~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~ai~~ 360 (462)
+++.|..- --.+.+|+++-.....+......+.++.+++..+++.+.+
T Consensus 280 ~~~gR~~~---~~~~~vG~f~n~lplr~~~~~~~~~t~~~~l~~v~~~~~~ 327 (493)
T 4hvm_A 280 EVDLRDHL---QLGSVVGPLTDRVVFGVDLTGLREPSFRDLMSRTQAGFLD 327 (493)
T ss_dssp EEEHHHHT---TCCSBCSCCEEEEEEEEECTTCSSCBHHHHHHHHHHHHHH
T ss_pred eccCCCCc---chhcCeEeeeceeEEEEecCCCcCCCHHHHHHHHHHHHHH
Confidence 99999762 2246667766554444443322134677777777776654
No 9
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.45 E-value=1.1e-05 Score=81.56 Aligned_cols=238 Identities=14% Similarity=0.073 Sum_probs=140.9
Q ss_pred HHHHHHHHHHHHhhhCCCCCceEEeCCCCcEEEEeCCCCceEEEEEcCCcccccccCCCCCchh----hhhcccCCCCCC
Q 012489 61 LISLLKKSLSQTLSHFPPLAGRFTTDSDGYIYITSNDAGVDFIHKNATVWSVRDILSPVHVPEN----VKSFFALDRTVS 136 (462)
Q Consensus 61 ~~~~L~~sL~~~L~~~p~LaGrl~~~~~G~~~i~~~~~gv~f~~a~~~~~~l~~l~~~~~~p~~----~~~l~p~~~~~~ 136 (462)
..++|+++|.+++..+|.|--++... +| .+ .......+... ++....+.... +....-.+
T Consensus 34 d~~~L~~A~~~lv~rh~~LRt~f~~~-~~--~v-~~~~~~~~~~~--------d~~~~~~~~~~~~~~~~~~~~~~---- 97 (436)
T 1l5a_A 34 DTTLLLRALHLTVSEIDLFRARFSAQ-GE--LY-WHPFSPPIDYQ--------DLSIHLEAEPLAWRQIEQDLQRS---- 97 (436)
T ss_dssp CHHHHHHHHHHHHHTCGGGGEEECTT-CC--EE-ECSSCCCCEEE--------ECTTCTTHHHHHHHHHHHHHTSC----
T ss_pred CHHHHHHHHHHHHHHhheeEEEEEec-CC--eE-CCCcCCCccEE--------eCCCCCCHHHHHHHHHHHHhcCC----
Confidence 37899999999999999999888653 34 22 22222222221 11111000001 11111111
Q ss_pred CCCCCCCeEEEEEEEec-CcEEEEecccccccchhhHHHHHHHHHHHhc----CCCCCCCCCCCC------c---CC---
Q 012489 137 YEGHYRPILIVQVTELA-DGVFIGCAMNHAVADGTSFWNFFNTFAELTK----GIKKISKQPEFS------R---DS--- 199 (462)
Q Consensus 137 ~~~~~~Pll~vQvt~~~-gG~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r----g~~~~~~~P~~d------r---~~--- 199 (462)
++-...|++++.+.... +...|.+.+||.++||.|+..|++.+.+.+. |.......+.+. + ..
T Consensus 98 fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (436)
T 1l5a_A 98 STLIDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTPTAAFKPYQSYLEEEAAYLTSHRY 177 (436)
T ss_dssp CCCBTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCHHHHHHHHHHHHTSHHH
T ss_pred CCcCCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhhccHhH
Confidence 12235688888887776 6799999999999999999999999999987 543211111111 0 00
Q ss_pred ---C---------CCCCccccCCCCCCccccCCCCCceEEEEeeCHHHHHHHHHHhccccccCCCCchhHHhhcccCCcc
Q 012489 200 ---V---------LVSPAVLMIPDGGLKVTFDENEPLSERIFSFSRESILKLKARVNNNKWIDNGHVDAVELLGKQSNDT 267 (462)
Q Consensus 200 ---~---------~~~p~~~p~~~~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (462)
. ..++..+|... ...........+.++.+..++|++.|..
T Consensus 178 ~~~~~~W~~~l~~~~~~~~lp~~~------~~~~~~~~~~~~~l~~~~~~~l~~~a~~---------------------- 229 (436)
T 1l5a_A 178 WQDKQFWQGYLREAPDLTLTSATY------DPQLSHAVSLSYTLNSQLNHLLLKLANA---------------------- 229 (436)
T ss_dssp HHHHHHHHHHHHTSCCCCBCCTTC------CGGGCCEEEEEEECCHHHHHHHHHHHHH----------------------
T ss_pred HHHHHHHHHHhcCCCCcccCCCCC------CCCcccceeeEEecCHHHHHHHHHHHHH----------------------
Confidence 0 00111111100 0011223467889999999999998874
Q ss_pred ccccccCCCCCcChHHHHHHHHHHHhhhhcCCCCCCceEEEEEeccCCcCCCCCCCCCcccccccccccccccccccCCH
Q 012489 268 YWLKKTESNGEISSFQSLSALLWRAVTRARKLHVNKMTTFRMAVNCRHRLNPKLDPLYFGNAIQSIPTYASAGDVLSKDL 347 (462)
Q Consensus 268 ~~~~~~~~~~~~St~d~l~AllW~~~~~Ar~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~l~~~~L 347 (462)
..+|.+.++.|.+-..+.+-. . ....+.++++.|.. + --.+-+|+++-.....+... .+.++
T Consensus 230 ---------~~~t~~~~l~aa~~~~L~~~~---g-~dv~ig~~~~~R~~--~-~~~~~vG~f~n~lplr~~~~--~~~t~ 291 (436)
T 1l5a_A 230 ---------NQIGWPDALVALCALYLESAE---P-DAPWLWLPFMNRWG--S-VAANVPGLMVNSLPLLRLSA--QQTSL 291 (436)
T ss_dssp ---------TTCCHHHHHHHHHHHHHHHHS---T-TCCEEEEEECCCTT--S-GGGGSCSCCCEEEEEECCCC--TTCBH
T ss_pred ---------hCCCHHHHHHHHHHHHHHHhh---C-CceEEeeecccCCC--h-HHhcCcceEEEEEEEEEecC--CCCCH
Confidence 247889999888666665543 3 66889999999975 2 12345566554433333322 13467
Q ss_pred HHHHHHHHHhhhh
Q 012489 348 RWCAEQLNKNVNA 360 (462)
Q Consensus 348 ~~~A~~ir~ai~~ 360 (462)
.+++..+++.+.+
T Consensus 292 ~~~l~~v~~~~~~ 304 (436)
T 1l5a_A 292 GNYLKQSGQAIRS 304 (436)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7788888777654
No 10
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=98.41 E-value=2.8e-05 Score=79.23 Aligned_cols=285 Identities=15% Similarity=0.101 Sum_probs=158.9
Q ss_pred CCceeeCCCCCcCc-----cccCceeeEEEEcCCCCChhHHHHHHHHHHHHHhhhCCCCCceEEeCCCCcEEEEeCC--C
Q 012489 26 NLGDLKLSVSDLPM-----LSCHYIQKGCLFTRPPFPIDYLISLLKKSLSQTLSHFPPLAGRFTTDSDGYIYITSND--A 98 (462)
Q Consensus 26 ~~~~~~LS~lD~~~-----~~~~~~~~~~~f~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~G~~~i~~~~--~ 98 (462)
....+|||+..+.+ +........+.|.... .. ..++|+++|.+++..+|.|--++....++-.++.... .
T Consensus 14 ~~~~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g-~l--d~~~L~~Al~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~ 90 (466)
T 2xhg_A 14 IAGNVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPE-GF--DPKVIQSVMDKIIEHHDALRMVYQHENGNVVQHNRGLGGQ 90 (466)
T ss_dssp CCEECCCCHHHHHHHHTTCTTTTCBEEEEEEEETT-CC--CHHHHHHHHHHHHHHSGGGGEEEECGGGCCEEEECCSSSC
T ss_pred cCCCCCCCHHHHHHHhCCCCCcCcceeEEEEEcCC-CC--CHHHHHHHHHHHHHhChHhheEEecCCCceeeeccccccc
Confidence 35678888765421 1111123344444432 12 4789999999999999999999976533333333321 2
Q ss_pred CceEEEEEcCCcccccccCCCCCchhhhhccc-CCCCCCCCCCCCCeEEEEEEEecCcEEEEecccccccchhhHHHHHH
Q 012489 99 GVDFIHKNATVWSVRDILSPVHVPENVKSFFA-LDRTVSYEGHYRPILIVQVTELADGVFIGCAMNHAVADGTSFWNFFN 177 (462)
Q Consensus 99 gv~f~~a~~~~~~l~~l~~~~~~p~~~~~l~p-~~~~~~~~~~~~Pll~vQvt~~~gG~~l~~~~~H~v~Dg~g~~~fl~ 177 (462)
...+.+.... ...+....++.+.- ... .++-...|++++.+....++-.|-+.+||.++||.|+..|++
T Consensus 91 ~~~~~~~d~~--------~~~~~~~~~~~~~~~~~~--~fdl~~~pl~r~~l~~~~~~~~l~l~~HH~i~Dg~S~~~l~~ 160 (466)
T 2xhg_A 91 LYDFFSYNLT--------AQPDVQQAIEAETQRLHS--SMNLQEGPLVKVALFQTLHGDHLFLAIHHLVVDGISWRILFE 160 (466)
T ss_dssp CCEEEEEECT--------TCSCHHHHHHHHHHHHHT--TCCTTTCCCEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHH
T ss_pred cceeEEEecC--------CcccHHHHHHHHHHHHHh--ccCCCCCCeEEEEEEEcCCCCEEEEEeeeeeechhhHHHHHH
Confidence 2333222211 11010111111000 000 012235689988888887554477999999999999999999
Q ss_pred HHHHHhc----CCCCCCCCC---CCC------cC---C------C------CC--CCccccCCCCCCccccCCCCCceEE
Q 012489 178 TFAELTK----GIKKISKQP---EFS------RD---S------V------LV--SPAVLMIPDGGLKVTFDENEPLSER 227 (462)
Q Consensus 178 ~wa~~~r----g~~~~~~~P---~~d------r~---~------~------~~--~p~~~p~~~~~~~~~~~~~~~~~~~ 227 (462)
.+.+.++ |.. +..+| .+. ++ . . +. ++..+|...... ..........
T Consensus 161 el~~~Y~~~~~g~~-~~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~~~lp~~~~~~---~~~~~~~~~~ 236 (466)
T 2xhg_A 161 DLATGYAQALAGQA-ISLPEKTDSFQSWSQWLQEYANEADLLSEIPYWESLESQAKNVSLPKDYEVT---DCKQKSVRNM 236 (466)
T ss_dssp HHHHHHHHHHTTCC-CCCCCCCSCHHHHHHHHHHHTTSHHHHTTHHHHHHHHHHCCCCCCCCSSCCS---SCBGGGEEEE
T ss_pred HHHHHHHHHHcCCC-CCCCCCCCCHHHHHHHHHHHhcCccchhhhHHHHHhhccCCcccCCcccccc---ccccccceEE
Confidence 9999885 432 11111 110 00 0 0 00 111111110000 0001123457
Q ss_pred EEeeCHHHHHHHHHHhccccccCCCCchhHHhhcccCCccccccccCCCCCcChHHHHHHHHHHHhhhhcCCCCCCceEE
Q 012489 228 IFSFSRESILKLKARVNNNKWIDNGHVDAVELLGKQSNDTYWLKKTESNGEISSFQSLSALLWRAVTRARKLHVNKMTTF 307 (462)
Q Consensus 228 ~f~~~~~~l~~Lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~St~d~l~AllW~~~~~Ar~~~~~~~~~l 307 (462)
.+.++.+..++|++.+.. ...+|.++++.|.+-..+.+-.+ .....+
T Consensus 237 ~~~l~~~~~~~l~~~~~~------------------------------~~~~t~~~~llaa~~~~l~~~~~---~~dv~i 283 (466)
T 2xhg_A 237 RIRLHPEETEQLLKHANQ------------------------------AYQTEINDLLLAALGLAFAEWSK---LAQIVI 283 (466)
T ss_dssp EEECCHHHHHHHHHTGGG------------------------------TTTCCHHHHHHHHHHHHHHHHHC---CSEEEE
T ss_pred EEEcCHHHHHHHHHHhHH------------------------------hhCCCHHHHHHHHHHHHHHHHhC---CCceEE
Confidence 789999999999887652 13478899998887766665543 456889
Q ss_pred EEEeccCCcCCC-CCCCCCcccccccccccccccccccCCHHHHHHHHHHhhhhCC
Q 012489 308 RMAVNCRHRLNP-KLDPLYFGNAIQSIPTYASAGDVLSKDLRWCAEQLNKNVNAHD 362 (462)
Q Consensus 308 ~~~vd~R~rl~p-plp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~ir~ai~~~~ 362 (462)
.++++.|....+ +--.+-+|+++......+.+. .+.++.+++..+++.+..+.
T Consensus 284 g~~~~gR~~~~~~~~~~~~vG~f~n~lplr~~~~--~~~~~~~~l~~v~~~~~~~~ 337 (466)
T 2xhg_A 284 HLEGHGREDIIEQANVARTVGWFTSQYPVLLDLK--QTAPLSDYIKLTKENMRKIP 337 (466)
T ss_dssp EEEECCCCSCSTTCCCTTCCSCCCEEEEEEEECS--CCCSHHHHHHHHHHHHHHSG
T ss_pred EecCCCCCccccCCCccccccceeeeccEEEecC--CCCCHHHHHHHHHHHHHhCc
Confidence 999999986421 112345566554433333322 13478889999999888763
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.06 E-value=0.0003 Score=81.15 Aligned_cols=250 Identities=11% Similarity=0.058 Sum_probs=145.4
Q ss_pred HHHHHHHHHHHHhhhCCCCCceEEeCCCC-cEEEEeCCCCceEEEEEcCCcccccccCCCCCchhhhhc--ccCCCCCCC
Q 012489 61 LISLLKKSLSQTLSHFPPLAGRFTTDSDG-YIYITSNDAGVDFIHKNATVWSVRDILSPVHVPENVKSF--FALDRTVSY 137 (462)
Q Consensus 61 ~~~~L~~sL~~~L~~~p~LaGrl~~~~~G-~~~i~~~~~gv~f~~a~~~~~~l~~l~~~~~~p~~~~~l--~p~~~~~~~ 137 (462)
.+++|+++|.+++..++.|--++....+| -.++........+.+......+-.+-.. ......++. -|+
T Consensus 48 d~~~l~~A~~~lv~rH~~LRt~f~~~~~~~p~Q~v~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~~~~~~~f------ 119 (1304)
T 2vsq_A 48 NIKCLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVLKKRQFHIEEIDLTHLTGSEQTA--KINEYKEQDKIRGF------ 119 (1304)
T ss_dssp CHHHHHHHHHHHHHHCGGGGEEEECSSCSSCEEEEESCCCCCEEEEECTTSCHHHHHH--HHHHHHHHHHHHCC------
T ss_pred CHHHHHHHHHHHHHhhhhceEEEEEcCCCeEEEEECCCCCCceEEEECCCCCchhHHH--HHHHHHHHHhcCCC------
Confidence 37999999999999999999998765444 4555554433333332221000000000 000011111 121
Q ss_pred CCCCCCeEEEEEEEec-CcEEEEecccccccchhhHHHHHHHHHHHhcC----CCCCCCCC--CC-Cc-----CCC----
Q 012489 138 EGHYRPILIVQVTELA-DGVFIGCAMNHAVADGTSFWNFFNTFAELTKG----IKKISKQP--EF-SR-----DSV---- 200 (462)
Q Consensus 138 ~~~~~Pll~vQvt~~~-gG~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg----~~~~~~~P--~~-dr-----~~~---- 200 (462)
+-...|++++.+.... +...|-+.+||.++||.|+..|++.+.+.+++ .. ...+| .+ |- ...
T Consensus 120 dl~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~-~~l~~~~~y~d~~~~~~~~~~~~~ 198 (1304)
T 2vsq_A 120 DLTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKP-YSLPPVKPYKDYIKWLEKQDKQAS 198 (1304)
T ss_dssp CTTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCC-CCCCCCCCTHHHHHHHHTSCHHHH
T ss_pred CCCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCCC-CCCCCcccHHHHHHHHhcchhhHH
Confidence 2235689998888887 66899999999999999999999999998863 22 11111 11 10 000
Q ss_pred ----------CCCCccccCCCCCCccccCCCCCceEEEEeeCHHHHHHHHHHhccccccCCCCchhHHhhcccCCccccc
Q 012489 201 ----------LVSPAVLMIPDGGLKVTFDENEPLSERIFSFSRESILKLKARVNNNKWIDNGHVDAVELLGKQSNDTYWL 270 (462)
Q Consensus 201 ----------~~~p~~~p~~~~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (462)
...+..+|... . . ...........+.++++..++||+.|.+
T Consensus 199 ~~yW~~~L~~~~~~~~lp~~~--~-~-~~~~~~~~~~~~~l~~~~~~~L~~~a~~------------------------- 249 (1304)
T 2vsq_A 199 LRYWREYLEGFEGQTTFAEQR--K-K-QKDGYEPKELLFSPSEAETKAFTELAKS------------------------- 249 (1304)
T ss_dssp HHHHHHHHTTCCCCCTTTTTC--C-C-SSCCCCEEEEEECCCHHHHHHHHHHHHH-------------------------
T ss_pred HHHHHHHhCCCCccccCCCCC--C-c-cccccCcceEEEecCHHHHHHHHHHHHH-------------------------
Confidence 01111111100 0 0 0011223457789999999999998874
Q ss_pred cccCCCCCcChHHHHHHHHHHHhhhhcCCCCCCceEEEEEeccCCcCCCCCCCCCcccccccccccccccccccCCHHHH
Q 012489 271 KKTESNGEISSFQSLSALLWRAVTRARKLHVNKMTTFRMAVNCRHRLNPKLDPLYFGNAIQSIPTYASAGDVLSKDLRWC 350 (462)
Q Consensus 271 ~~~~~~~~~St~d~l~AllW~~~~~Ar~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~ 350 (462)
..+|.+.++.|.+-..+.|-. ..+...+.++++.|....+.+ .+-+|+.+-....++.+. .+.++.++
T Consensus 250 ------~~~T~~~vllaa~a~~L~r~t---g~~dvv~G~pvsgR~~~~~~~-~~~vG~fvntlplr~~~~--~~~s~~~l 317 (1304)
T 2vsq_A 250 ------QHTTLSTALQAVWSVLISRYQ---QSGDLAFGTVVSGRPAEIKGV-EHMVGLFINVVPRRVKLS--EGITFNGL 317 (1304)
T ss_dssp ------TTCCHHHHHHHHHHHHHHHHH---TCSEEEEEEEECCCCTTSTTG-GGCCSSCCEEEEEEEECC--TTCBHHHH
T ss_pred ------cCCCHHHHHHHHHHHHHHHhc---CCCCEEEEEEeCCCCccchhh-hcccccceeEEEEEecCC--CCCcHHHH
Confidence 247888988887665565543 346789999999997532222 344455443333333222 13468888
Q ss_pred HHHHHHhhhh
Q 012489 351 AEQLNKNVNA 360 (462)
Q Consensus 351 A~~ir~ai~~ 360 (462)
...+++...+
T Consensus 318 l~~v~~~~~~ 327 (1304)
T 2vsq_A 318 LKRLQEQSLQ 327 (1304)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888877654
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=97.78 E-value=0.0022 Score=66.26 Aligned_cols=266 Identities=14% Similarity=0.076 Sum_probs=142.2
Q ss_pred hhHHHHHHHHHHHHHhhhCCCCCceEEeCCCCcEEEEeC---C-CCc------eEEEEEcCCcccccccCCCCCchhhhh
Q 012489 58 IDYLISLLKKSLSQTLSHFPPLAGRFTTDSDGYIYITSN---D-AGV------DFIHKNATVWSVRDILSPVHVPENVKS 127 (462)
Q Consensus 58 ~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~G~~~i~~~---~-~gv------~f~~a~~~~~~l~~l~~~~~~p~~~~~ 127 (462)
..+..++||.|+-.+=-.+|-+|+++..+..+.....+. + +-+ -|.+.+.+ .+-+|+... ....
T Consensus 71 ~~~l~~~lr~AW~~lR~~hP~iA~~v~~d~~~~~~~~Y~~~~~~~~~~~Wl~~Tf~v~~~~-~t~~e~~~~-----~~~~ 144 (519)
T 3fot_A 71 LQNLKEMFELALLDARFEHPECACTVSWDDEVPAIITYESPESNESARDWARGCIHVQPTA-KSALDLWSE-----MEEG 144 (519)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGGCEEECCSSSSCEEEEECCSSHHHHHHHHHHHEEEEECS-CCHHHHHHH-----HHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCcceeEEeeCCCCcccEEEecCCCHHHHHHHHHhcEEEeCCC-CCHHHHHHh-----hhhh
Confidence 467899999999999999999999998763333333331 1 101 13322222 222222000 0000
Q ss_pred cccCCCCCCCCCCCCCeEEEEEEE------ecC--cEEEEecccccccchhhHHHHHHHHHHHhcCCC---CCCCCCCCC
Q 012489 128 FFALDRTVSYEGHYRPILIVQVTE------LAD--GVFIGCAMNHAVADGTSFWNFFNTFAELTKGIK---KISKQPEFS 196 (462)
Q Consensus 128 l~p~~~~~~~~~~~~Pll~vQvt~------~~g--G~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg~~---~~~~~P~~d 196 (462)
-.+.... .....+.+.+-... +.+ -.-|.+.+||.++||.|...|++.+-+...... .....|.++
T Consensus 145 r~~~~~~---~p~~~~~l~~v~~~~~~~~~~p~~~~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~~~~~~~ 221 (519)
T 3fot_A 145 RAAANDN---TPSKSIELFLLSDVSTDSTPIPQDATVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSREMKKIQ 221 (519)
T ss_dssp HHHTC-C---CCCCSCEEEEEESSSSTTSCCCTTCEEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGGGSCCCC
T ss_pred hcccccC---CCccceEEEEEeccccccccCCCCceEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCccCCCcCC
Confidence 0000000 00011111110000 333 367888999999999999999999988776321 011223332
Q ss_pred -c-CC-CCCCCc----cccCCCC----C----C----------ccccC-CCCCc--eEEEEeeCHHHHHHHHHHhccccc
Q 012489 197 -R-DS-VLVSPA----VLMIPDG----G----L----------KVTFD-ENEPL--SERIFSFSRESILKLKARVNNNKW 248 (462)
Q Consensus 197 -r-~~-~~~~p~----~~p~~~~----~----~----------~~~~~-~~~~~--~~~~f~~~~~~l~~Lk~~~~~~~~ 248 (462)
. +. .+.||. .+|.... + . ...++ ...+. ....+.|+++..++|++.|+..
T Consensus 222 ~g~E~~~L~P~~e~~~~~p~~~~~~e~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~ls~~~t~~L~~~ck~~-- 299 (519)
T 3fot_A 222 WGQEIKNLSPPVVDSLKLDINTLGSEFDDKCTEYTSALVANYKSRGMKFQPGLALPRCVIHKLSADESIDIVKAVKTR-- 299 (519)
T ss_dssp TTTTGGGSCCCTGGGBSSCGGGCCHHHHHHHHHHHHHHHHHHHSCCSBCCCCCCCEEEEEEECCHHHHHHHHHHHHHH--
T ss_pred CCcccccCCcCHHHHhCCCCCCCCHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCcceEEEEcCHHHHHHHHHHHHhc--
Confidence 1 11 122221 1221100 0 0 01111 11112 3467899999999999999852
Q ss_pred cCCCCchhHHhhcccCCccccccccCCCCCcChHHHHHHHHHHHhhhhcC---CCCCCceEEEEEeccCCcCCCCCCCCC
Q 012489 249 IDNGHVDAVELLGKQSNDTYWLKKTESNGEISSFQSLSALLWRAVTRARK---LHVNKMTTFRMAVNCRHRLNPKLDPLY 325 (462)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~St~d~l~AllW~~~~~Ar~---~~~~~~~~l~~~vd~R~rl~pplp~~Y 325 (462)
-+..+|-+.+|.|.+-.++.+... ........+.++||+|+.+.++.-.+|
T Consensus 300 --------------------------~~~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~~~pvnlR~~l~~~~~~n~ 353 (519)
T 3fot_A 300 --------------------------LGPGFTISHLTQAAIVLALLDHLKPNDLSDDEVFISPTSVDGRRWLREDIASNF 353 (519)
T ss_dssp --------------------------TCTTCCHHHHHHHHHHHHHHHHC----CCTTCCEEEEEEEECGGGBCHHHHTSC
T ss_pred --------------------------CCCCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEEEeeeeccccCCCcccccc
Confidence 134688899998887777766421 112335788999999999976555578
Q ss_pred cccccccccccccc-c---------ccccCC-HHHHHHHHHHhhhh
Q 012489 326 FGNAIQSIPTYASA-G---------DVLSKD-LRWCAEQLNKNVNA 360 (462)
Q Consensus 326 ~GN~~~~~~~~~~~-~---------~l~~~~-L~~~A~~ir~ai~~ 360 (462)
||.+........+. . |+..+- +.+++..+++....
T Consensus 354 ~~~~~~~~~~~v~~i~~~~~~~~~~e~~~~~~~~~~ar~l~~~y~~ 399 (519)
T 3fot_A 354 YAMCQTAAVVRIENLKSITVSHKDEKELQVRALESACRNIKKSYRQ 399 (519)
T ss_dssp CSCCEEEEEEEECCGGGGCCCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceeeeeeeeEecCccccccccchhhhhhHhHHHHHHHHHHHHhhc
Confidence 88887654433211 1 111111 46667777776655
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=71.43 E-value=2.7 Score=37.69 Aligned_cols=44 Identities=25% Similarity=0.452 Sum_probs=33.3
Q ss_pred CCCeEEEEEEEecCc---EEEEecccccccchhhHHHHHHHHHHHhc
Q 012489 141 YRPILIVQVTELADG---VFIGCAMNHAVADGTSFWNFFNTFAELTK 184 (462)
Q Consensus 141 ~~Pll~vQvt~~~gG---~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 184 (462)
..|++.+--..-++| +-|++++||.++||.-+..|++.+.+.+.
T Consensus 163 ~~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 163 FAPIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp CSCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred cccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 358876421111233 78999999999999999999999998764
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=71.01 E-value=2.8 Score=37.64 Aligned_cols=43 Identities=19% Similarity=0.386 Sum_probs=31.8
Q ss_pred CCCeEEEEEEEecCc---EEEEecccccccchhhHHHHHHHHHHHh
Q 012489 141 YRPILIVQVTELADG---VFIGCAMNHAVADGTSFWNFFNTFAELT 183 (462)
Q Consensus 141 ~~Pll~vQvt~~~gG---~~l~~~~~H~v~Dg~g~~~fl~~wa~~~ 183 (462)
..|++.+=-..-++| +-|++++||.+.||.-+..|++.+.+.+
T Consensus 171 ~~PIi~~Gk~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 171 NYPLLNAGKAIIREGRLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp SSCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred eEEEEecceEEEECCcEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 468875311111233 7899999999999999999999998764
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=70.02 E-value=3 Score=37.55 Aligned_cols=43 Identities=16% Similarity=0.277 Sum_probs=33.1
Q ss_pred CCeEEEEEEEecCc---EEEEecccccccchhhHHHHHHHHHHHhc
Q 012489 142 RPILIVQVTELADG---VFIGCAMNHAVADGTSFWNFFNTFAELTK 184 (462)
Q Consensus 142 ~Pll~vQvt~~~gG---~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 184 (462)
.|++.+--..-++| +-|++++||.+.||.-+..|++.+.+.+.
T Consensus 168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 57776422222244 78999999999999999999999998764
No 16
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=67.90 E-value=3.6 Score=37.52 Aligned_cols=30 Identities=17% Similarity=0.279 Sum_probs=27.6
Q ss_pred EEEEecccccccchhhHHHHHHHHHHHhcC
Q 012489 156 VFIGCAMNHAVADGTSFWNFFNTFAELTKG 185 (462)
Q Consensus 156 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 185 (462)
+-|+++++|.+.||.-+..|++.+.+.+..
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 233 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLEK 233 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 789999999999999999999999988753
No 17
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=66.20 E-value=3.4 Score=37.32 Aligned_cols=30 Identities=13% Similarity=0.376 Sum_probs=27.7
Q ss_pred EEEEecccccccchhhHHHHHHHHHHHhcC
Q 012489 156 VFIGCAMNHAVADGTSFWNFFNTFAELTKG 185 (462)
Q Consensus 156 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 185 (462)
+-|+++++|.+.||.-+..|++.+.+....
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~ 216 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIED 216 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHhC
Confidence 568999999999999999999999999865
No 18
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=66.18 E-value=3.9 Score=37.13 Aligned_cols=30 Identities=23% Similarity=0.465 Sum_probs=27.5
Q ss_pred EEEEecccccccchhhHHHHHHHHHHHhcC
Q 012489 156 VFIGCAMNHAVADGTSFWNFFNTFAELTKG 185 (462)
Q Consensus 156 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 185 (462)
+-|+++++|.+.||.-+..|++.+.+.+..
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 669999999999999999999999998754
No 19
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=66.07 E-value=3.9 Score=37.38 Aligned_cols=30 Identities=13% Similarity=0.239 Sum_probs=27.4
Q ss_pred EEEEecccccccchhhHHHHHHHHHHHhcC
Q 012489 156 VFIGCAMNHAVADGTSFWNFFNTFAELTKG 185 (462)
Q Consensus 156 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 185 (462)
+-|+++++|.+.||.-+..|++.+.+.+..
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 237 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLAD 237 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHhC
Confidence 679999999999999999999999988753
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=64.57 E-value=4.3 Score=37.56 Aligned_cols=30 Identities=17% Similarity=0.359 Sum_probs=27.2
Q ss_pred EEEEecccccccchhhHHHHHHHHHHHhcC
Q 012489 156 VFIGCAMNHAVADGTSFWNFFNTFAELTKG 185 (462)
Q Consensus 156 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 185 (462)
+-|+++++|.+.||.-+..|++.+.+.+..
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le~ 253 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLEN 253 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHhC
Confidence 679999999999999999999999988753
No 21
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=59.13 E-value=6.2 Score=36.33 Aligned_cols=30 Identities=17% Similarity=0.258 Sum_probs=27.8
Q ss_pred EEEEecccccccchhhHHHHHHHHHHHhcC
Q 012489 156 VFIGCAMNHAVADGTSFWNFFNTFAELTKG 185 (462)
Q Consensus 156 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 185 (462)
+-|+++++|.+.||.-+..|++.+.+.+..
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 239 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEK 239 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhC
Confidence 459999999999999999999999999875
No 22
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=57.53 E-value=6.9 Score=35.89 Aligned_cols=30 Identities=23% Similarity=0.562 Sum_probs=27.5
Q ss_pred EEEEecccccccchhhHHHHHHHHHHHhcC
Q 012489 156 VFIGCAMNHAVADGTSFWNFFNTFAELTKG 185 (462)
Q Consensus 156 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 185 (462)
+-|+++++|.+.||.-+..|++.+.+....
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 234 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIES 234 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHhC
Confidence 568999999999999999999999999864
No 23
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=53.50 E-value=37 Score=23.63 Aligned_cols=36 Identities=22% Similarity=0.289 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHhhhCCCCCceEEeCCCC-cEEEEeC
Q 012489 61 LISLLKKSLSQTLSHFPPLAGRFTTDSDG-YIYITSN 96 (462)
Q Consensus 61 ~~~~L~~sL~~~L~~~p~LaGrl~~~~~G-~~~i~~~ 96 (462)
..+.++++|...+.+-..+||.+...-|| .++|...
T Consensus 11 dleafekalkemirqarkfagtvtytldgndleirit 47 (85)
T 2kl8_A 11 DLEAFEKALKEMIRQARKFAGTVTYTLDGNDLEIRIT 47 (85)
T ss_dssp SHHHHHHHHHHHHHHHTTTTCEEEEEECSSCEEEEEE
T ss_pred cHHHHHHHHHHHHHHHHhhcceEEEEecCCeeEEEEe
Confidence 36888999999999999999999887444 6788764
No 24
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=47.85 E-value=25 Score=27.69 Aligned_cols=44 Identities=18% Similarity=0.203 Sum_probs=34.2
Q ss_pred eEEEEcCCCCChhHHHHHHHHHHHHHhhhCCCCCceEEeCCC-CcEEEEeC
Q 012489 47 KGCLFTRPPFPIDYLISLLKKSLSQTLSHFPPLAGRFTTDSD-GYIYITSN 96 (462)
Q Consensus 47 ~~~~f~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~-G~~~i~~~ 96 (462)
+.+.|..+ ..+.|+++|...+.+-..|||.+...-+ ++++|...
T Consensus 85 m~i~f~gd------dlea~ekalkemirqarkfagtvtytl~gn~l~i~it 129 (170)
T 4hhu_A 85 MVIVFEGD------DLEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVIT 129 (170)
T ss_dssp EEEEEECS------CHHHHHHHHHHHHHHHHHTTCEEEEEECSSEEEEEEE
T ss_pred EEEEEecC------cHHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEEe
Confidence 45566654 3789999999999999999999988744 47777764
No 25
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=44.61 E-value=25 Score=27.69 Aligned_cols=44 Identities=18% Similarity=0.203 Sum_probs=34.0
Q ss_pred eEEEEcCCCCChhHHHHHHHHHHHHHhhhCCCCCceEEeCCC-CcEEEEeC
Q 012489 47 KGCLFTRPPFPIDYLISLLKKSLSQTLSHFPPLAGRFTTDSD-GYIYITSN 96 (462)
Q Consensus 47 ~~~~f~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~-G~~~i~~~ 96 (462)
+.+.|..+ ..+.|+++|...+.+-..|||.+...-+ ++++|...
T Consensus 4 m~i~f~gd------dlea~ekalkemirqarkfagtvtytl~gn~l~i~it 48 (170)
T 4hhu_A 4 MVIVFEGD------DLEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVIT 48 (170)
T ss_dssp EEEEEECS------CHHHHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEE
T ss_pred EEEEEecC------cHHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEEe
Confidence 35567654 3788999999999999999999987733 46777764
No 26
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=38.61 E-value=6.5 Score=39.15 Aligned_cols=30 Identities=17% Similarity=0.319 Sum_probs=0.0
Q ss_pred EEEEecccccccchhhHHHHHHHHHHHhcC
Q 012489 156 VFIGCAMNHAVADGTSFWNFFNTFAELTKG 185 (462)
Q Consensus 156 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 185 (462)
+-|+++++|.+.||.-+..|++.+.+.+..
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le~ 420 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLSD 420 (428)
T ss_dssp ------------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHhC
Confidence 359999999999999999999999988754
No 27
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=38.42 E-value=24 Score=19.13 Aligned_cols=20 Identities=35% Similarity=0.496 Sum_probs=16.4
Q ss_pred CCCcChHHHHHHHHHHHhhh
Q 012489 276 NGEISSFQSLSALLWRAVTR 295 (462)
Q Consensus 276 ~~~~St~d~l~AllW~~~~~ 295 (462)
.+-+++.|-|+-++|+++..
T Consensus 5 psvftsqdylsdhlwralna 24 (26)
T 2xl1_A 5 PSVFTSQDYLSDHLWRALNA 24 (26)
T ss_pred CceeecHHHHHHHHHHHHhc
Confidence 34678899999999998763
Done!