Query 012493
Match_columns 462
No_of_seqs 131 out of 829
Neff 2.6
Searched_HMMs 29240
Date Mon Mar 25 10:31:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012493.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012493hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hbk_A ACBP, acyl-COA binding 100.0 1.5E-31 5.2E-36 218.9 11.6 88 315-405 2-89 (89)
2 2cop_A Acyl-coenzyme A binding 100.0 1.9E-31 6.4E-36 226.4 11.8 95 311-410 4-98 (109)
3 1st7_A ACBP, acyl-COA-binding 100.0 1.5E-31 5.3E-36 217.6 7.9 85 315-404 1-85 (86)
4 3epy_A Acyl-COA-binding domain 100.0 9.1E-31 3.1E-35 215.3 9.5 85 314-403 3-87 (89)
5 2cqu_A Peroxisomal D3,D2-enoyl 100.0 2.4E-30 8.2E-35 222.5 12.3 95 311-410 12-106 (116)
6 2wh5_A Acyl-COA-binding domain 100.0 2E-30 6.7E-35 219.7 8.9 99 311-410 4-102 (106)
7 2cb8_A Acyl-COA-binding protei 100.0 4.2E-30 1.5E-34 210.1 9.3 84 316-404 3-86 (87)
8 3flv_A Acyl-COA-binding domain 100.0 3.9E-30 1.3E-34 222.6 9.1 92 311-403 20-111 (119)
9 3fp5_A Acyl-COA binding protei 100.0 9.3E-30 3.2E-34 215.8 9.3 87 315-402 4-90 (106)
10 2lbb_A Acyl COA binding protei 100.0 1.2E-29 4E-34 212.2 8.5 85 317-405 12-96 (96)
11 1mix_A Talin; focal adhesion, 98.2 7E-06 2.4E-10 71.7 9.9 83 315-403 18-114 (206)
12 4f7g_A Talin-1; alpha-helix bu 95.4 0.045 1.5E-06 49.0 8.1 84 314-403 28-125 (222)
13 1ef1_A Moesin; membrane, FERM 95.1 0.049 1.7E-06 50.2 7.6 82 317-404 98-199 (294)
14 1h4r_A Merlin; FERM, neurofibr 95.0 0.053 1.8E-06 50.6 7.5 66 337-403 133-218 (314)
15 3qij_A Protein 4.1; cytoskelet 94.9 0.069 2.4E-06 50.3 8.0 66 337-403 127-204 (296)
16 3ivf_A Talin-1; FERM domain, c 94.0 0.16 5.5E-06 48.7 8.4 66 337-403 200-279 (371)
17 2i1j_A Moesin; FERM, coiled-co 93.0 0.19 6.5E-06 52.3 7.6 67 337-404 116-202 (575)
18 3au4_A Myosin-X; protein-prote 90.1 0.98 3.4E-05 45.7 9.0 84 315-404 321-451 (555)
19 4dxa_B KREV interaction trappe 87.3 1 3.5E-05 42.5 6.5 80 318-403 117-221 (322)
20 2al6_A Focal adhesion kinase 1 86.8 0.88 3E-05 44.2 5.9 83 315-403 114-223 (375)
21 4eku_A Protein-tyrosine kinase 74.5 4.5 0.00015 40.2 6.1 87 313-405 132-245 (392)
22 3pvl_A Myosin VIIA isoform 1; 72.3 9.1 0.00031 40.5 8.1 81 318-403 373-475 (655)
23 2j0j_A Focal adhesion kinase 1 29.2 50 0.0017 33.9 4.7 63 337-399 132-220 (656)
No 1
>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1
Probab=99.97 E-value=1.5e-31 Score=218.85 Aligned_cols=88 Identities=28% Similarity=0.520 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCChHHHHHHHHhhhhhccCCCCCCCCCcccHHhHHHHHHHHHcCCCCHHHHHHHHHH
Q 012493 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVT 394 (462)
Q Consensus 315 LEE~FkaAVefVrsLPk~G~IsqpSnDdKLeLYALYKQATeGDCN~pKPG~fD~vgRAKWdAWKaLgGMSKEEAMrKYIE 394 (462)
|+++|.+|+.+|+.+++. .+|+++++|+|||||||||+|||++++||+||+++|+||+||++++|||+++||++||+
T Consensus 2 l~~~F~~A~~~v~~l~~~---~~~~~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~YI~ 78 (89)
T 1hbk_A 2 MAQVFEECVSFINGLPRT---INLPNELKLDLYKYYKQSTIGNCNIKEPSAHKYIDRKKYEAWKSVENLNREDAQKRYVD 78 (89)
T ss_dssp HHHHHHHHHHHHHHSCTT---CCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTSHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCc---CCCCHHHHHHHHHHHHHhhcCCCCCCCCCccCHHhHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 688999999999999742 47899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCccccc
Q 012493 395 ILSRSIPGCIQ 405 (462)
Q Consensus 395 LVeeLlP~W~e 405 (462)
+|++++|.|.+
T Consensus 79 ~v~~l~~~~~~ 89 (89)
T 1hbk_A 79 IVSEIFPYWQD 89 (89)
T ss_dssp HHHHHCTTTTC
T ss_pred HHHHHcccccC
Confidence 99999999963
No 2
>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.97 E-value=1.9e-31 Score=226.44 Aligned_cols=95 Identities=26% Similarity=0.507 Sum_probs=89.2
Q ss_pred ccchHHHHHHHHHHHHhhcccCCCCCCCChHHHHHHHHhhhhhccCCCCCCCCCcccHHhHHHHHHHHHcCCCCHHHHHH
Q 012493 311 ERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAME 390 (462)
Q Consensus 311 EsSELEE~FkaAVefVrsLPk~G~IsqpSnDdKLeLYALYKQATeGDCN~pKPG~fD~vgRAKWdAWKaLgGMSKEEAMr 390 (462)
++++|++.|.+|+.+|+.++ .+|+++++|+|||||||||+|||++++|++||+++|+||+||++|+|||+++||+
T Consensus 4 ~~~~l~~~F~~A~~~vk~l~-----~~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gms~eeAm~ 78 (109)
T 2cop_A 4 GSSGLAELFEKAAAHLQGLI-----QVASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWKALGDSSPSQAMQ 78 (109)
T ss_dssp CCCCSHHHHHHHHHHHTTST-----TTSCHHHHHHHHHHHHHHHTCSCCSCCCCSSCHHHHHHHHHHHSCTTCCHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHcc-----cCCCHHHHHHHHHHHHHhhcCCCCCCCCCccCHHHHHHHHHHHHhcCCCHHHHHH
Confidence 46678999999999999986 3689999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCcccccCCCCC
Q 012493 391 QYVTILSRSIPGCIQDGIGG 410 (462)
Q Consensus 391 KYIELVeeLlP~W~e~t~~~ 410 (462)
+||++|++++|.|....+..
T Consensus 79 ~YI~lv~~l~~~~~~~~~~~ 98 (109)
T 2cop_A 79 EYIAVVKKLDPGWNPQIPEK 98 (109)
T ss_dssp HHHHHHHHHCTTCCCCCCCC
T ss_pred HHHHHHHHHhhhhcccchhc
Confidence 99999999999999887654
No 3
>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.5e-31 Score=217.62 Aligned_cols=85 Identities=26% Similarity=0.447 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCChHHHHHHHHhhhhhccCCCCCCCCCcccHHhHHHHHHHHHcCCCCHHHHHHHHHH
Q 012493 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVT 394 (462)
Q Consensus 315 LEE~FkaAVefVrsLPk~G~IsqpSnDdKLeLYALYKQATeGDCN~pKPG~fD~vgRAKWdAWKaLgGMSKEEAMrKYIE 394 (462)
|++.|.+|+.+|+.++ .+|+++++|+|||||||||+|||++++||+||+++|+||+||++++|||+++||++||+
T Consensus 1 l~~~F~~A~~~v~~l~-----~~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gms~eeA~~~YI~ 75 (86)
T 1st7_A 1 VSQLFEEKAKAVNELP-----TKPSTDELLELYALYKQATVGDNDKEKPGIFNMKDRYKWEAWENLKGKSQEDAEKEYIA 75 (86)
T ss_dssp CHHHHHHHHHHHTSCS-----SCCCHHHHHHHHHHHHHHHHCSCCCCCCCSSCHHHHHHHHHHHTTTTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcc-----CCcCHHHHHHHHHHHHHHhhCCCCCCCCCccCHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 4689999999999996 36899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCcccc
Q 012493 395 ILSRSIPGCI 404 (462)
Q Consensus 395 LVeeLlP~W~ 404 (462)
+|++++|.|.
T Consensus 76 ~v~~l~~~~~ 85 (86)
T 1st7_A 76 LVDQLIAKYS 85 (86)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHhhhhc
Confidence 9999999995
No 4
>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} SCOP: a.11.1.1
Probab=99.97 E-value=9.1e-31 Score=215.28 Aligned_cols=85 Identities=26% Similarity=0.338 Sum_probs=81.8
Q ss_pred hHHHHHHHHHHHHhhcccCCCCCCCChHHHHHHHHhhhhhccCCCCCCCCCcccHHhHHHHHHHHHcCCCCHHHHHHHHH
Q 012493 314 ELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYV 393 (462)
Q Consensus 314 ELEE~FkaAVefVrsLPk~G~IsqpSnDdKLeLYALYKQATeGDCN~pKPG~fD~vgRAKWdAWKaLgGMSKEEAMrKYI 393 (462)
.|+++|.+|+++|+.++ .+|+++++|+|||||||||+|||+.++||+||+++|+||+||++++|||+++||++||
T Consensus 3 ~L~~~F~~A~~~vk~l~-----~~p~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~g~s~eeA~~~Yi 77 (89)
T 3epy_A 3 ALQADFDRAAEDVRKLK-----ARPDDGELKELYGLYKQAIVGDINIACPGMLDLKGKAKWEAWNLKKGLSTEDATSAYI 77 (89)
T ss_dssp HHHHHHHHHHHHGGGCS-----SCCCHHHHHHHHHHHHHHHTCSCCSCCTTTTCHHHHHHHHHHHTTTTCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcC-----CCcCHHHHHHHHHHHHHHhhCCCCCCCCcccchHHHHHHHHHHHhhCCCHHHHHHHHH
Confidence 48999999999999996 3689999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhCccc
Q 012493 394 TILSRSIPGC 403 (462)
Q Consensus 394 ELVeeLlP~W 403 (462)
++|++++|.|
T Consensus 78 ~~v~~l~~ky 87 (89)
T 3epy_A 78 SKAKELIEKY 87 (89)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHhhhh
Confidence 9999999987
No 5
>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.97 E-value=2.4e-30 Score=222.46 Aligned_cols=95 Identities=29% Similarity=0.511 Sum_probs=88.6
Q ss_pred ccchHHHHHHHHHHHHhhcccCCCCCCCChHHHHHHHHhhhhhccCCCCCCCCCcccHHhHHHHHHHHHcCCCCHHHHHH
Q 012493 311 ERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAME 390 (462)
Q Consensus 311 EsSELEE~FkaAVefVrsLPk~G~IsqpSnDdKLeLYALYKQATeGDCN~pKPG~fD~vgRAKWdAWKaLgGMSKEEAMr 390 (462)
.+.+|+++|.+|+++|+.++ ..|+++++|+|||||||||+|||+.++|++||+++|+||+||++|+|||+++||+
T Consensus 12 ~m~~~~~~F~~A~~~vk~l~-----~~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~graKw~AW~~l~gms~eeAm~ 86 (116)
T 2cqu_A 12 AMRASQKDFENSMNQVKLLK-----KDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGSLPKEAARQ 86 (116)
T ss_dssp SCCCCHHHHHHHHHHHHHCC-----SCCCHHHHHHHHHHHTTTTTCSCCSCCCCTTCHHHHHHHHHHHHHCSCCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcc-----CCCCHHHHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHHHhcCCCHHHHHH
Confidence 35567999999999999997 3589999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCcccccCCCCC
Q 012493 391 QYVTILSRSIPGCIQDGIGG 410 (462)
Q Consensus 391 KYIELVeeLlP~W~e~t~~~ 410 (462)
+||++|++++|.|.+.....
T Consensus 87 ~YI~lv~~l~~~~~~~~~~~ 106 (116)
T 2cqu_A 87 NYVDLVSSLSPSLESSSQVE 106 (116)
T ss_dssp HHHHHHHHHCSCCCCCCCCC
T ss_pred HHHHHHHHHccccccccccc
Confidence 99999999999998876654
No 6
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=99.96 E-value=2e-30 Score=219.70 Aligned_cols=99 Identities=29% Similarity=0.473 Sum_probs=85.9
Q ss_pred ccchHHHHHHHHHHHHhhcccCCCCCCCChHHHHHHHHhhhhhccCCCCCCCCCcccHHhHHHHHHHHHcCCCCHHHHHH
Q 012493 311 ERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAME 390 (462)
Q Consensus 311 EsSELEE~FkaAVefVrsLPk~G~IsqpSnDdKLeLYALYKQATeGDCN~pKPG~fD~vgRAKWdAWKaLgGMSKEEAMr 390 (462)
+.++|+++|.+|+++|+.+++.|. .+|+++++|+|||||||||+|||+.++||+||+++|+||+||++++|||+++||+
T Consensus 4 ~~~~l~~~F~~A~~~vk~l~~~g~-~~ps~e~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~ 82 (106)
T 2wh5_A 4 PEPDCQKQFQAAVSVIQNLPKNGS-YRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMS 82 (106)
T ss_dssp -----CHHHHHHHHHHHHSCSSCS-CCCCHHHHHHHHHHHHHHHHCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhccccCC-CCCCHHHHHHHHHHHhhhccCCCCCCCCCcccHHHHHHHHHHHHhcCCCHHHHHH
Confidence 345688999999999999987664 3789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCcccccCCCCC
Q 012493 391 QYVTILSRSIPGCIQDGIGG 410 (462)
Q Consensus 391 KYIELVeeLlP~W~e~t~~~ 410 (462)
+||+++++++|.+.+..|..
T Consensus 83 ~YI~~v~~l~~k~~~t~~~~ 102 (106)
T 2wh5_A 83 AYITEMKLVAQKVIDTVPLG 102 (106)
T ss_dssp HHHHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHHHHhhccCCch
Confidence 99999999999998776654
No 7
>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A
Probab=99.96 E-value=4.2e-30 Score=210.07 Aligned_cols=84 Identities=25% Similarity=0.370 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCChHHHHHHHHhhhhhccCCCCCCCCCcccHHhHHHHHHHHHcCCCCHHHHHHHHHHH
Q 012493 316 ERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTI 395 (462)
Q Consensus 316 EE~FkaAVefVrsLPk~G~IsqpSnDdKLeLYALYKQATeGDCN~pKPG~fD~vgRAKWdAWKaLgGMSKEEAMrKYIEL 395 (462)
++.|.+|+.+|+.++ .+|+++++|+|||||||||+|||++++||+||+++|+||+||++++|||+++||++||++
T Consensus 3 ~~~F~~A~~~vk~l~-----~~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~Yi~~ 77 (87)
T 2cb8_A 3 QAEFEKAAEEVRHLK-----TKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINK 77 (87)
T ss_dssp HHHHHHHHHHGGGCS-----SCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcc-----CCcCHHHHHHHHHHHHhhhhCCCCCCCCCcccHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 679999999999996 368999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCcccc
Q 012493 396 LSRSIPGCI 404 (462)
Q Consensus 396 VeeLlP~W~ 404 (462)
|++++|.|.
T Consensus 78 v~~l~~~~~ 86 (87)
T 2cb8_A 78 VEELKKKYG 86 (87)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999999884
No 8
>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens}
Probab=99.96 E-value=3.9e-30 Score=222.60 Aligned_cols=92 Identities=30% Similarity=0.477 Sum_probs=85.8
Q ss_pred ccchHHHHHHHHHHHHhhcccCCCCCCCChHHHHHHHHhhhhhccCCCCCCCCCcccHHhHHHHHHHHHcCCCCHHHHHH
Q 012493 311 ERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAME 390 (462)
Q Consensus 311 EsSELEE~FkaAVefVrsLPk~G~IsqpSnDdKLeLYALYKQATeGDCN~pKPG~fD~vgRAKWdAWKaLgGMSKEEAMr 390 (462)
.+++|+++|.+|+++|+.+|+.|+ .+|+++++|+|||||||||+|||+.++||+||+++|+||+||++++|||+++||+
T Consensus 20 ~~~dLe~~F~~A~~~Vk~l~~~g~-~~ps~d~~L~LYaLyKQAT~Gd~~~~~Pg~~d~~graKw~AW~~l~gmS~eeAm~ 98 (119)
T 3flv_A 20 FQSMHETRFEAAVKVIQSLPKNGS-FQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWSSLGDMTKEEAMI 98 (119)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHSS-CCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHhCcccCC-CCCCHHHHHHHHHHHHHHhcCCCCCCCCCccCHHHHHHHHHHHHccCCCHHHHHH
Confidence 577999999999999999987665 3789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCccc
Q 012493 391 QYVTILSRSIPGC 403 (462)
Q Consensus 391 KYIELVeeLlP~W 403 (462)
+||++++++++..
T Consensus 99 ~YI~~v~~l~~~~ 111 (119)
T 3flv_A 99 AYVEEMKKIIETM 111 (119)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhhC
Confidence 9999999998876
No 9
>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} SCOP: a.11.1.0
Probab=99.96 E-value=9.3e-30 Score=215.78 Aligned_cols=87 Identities=26% Similarity=0.434 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCChHHHHHHHHhhhhhccCCCCCCCCCcccHHhHHHHHHHHHcCCCCHHHHHHHHHH
Q 012493 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVT 394 (462)
Q Consensus 315 LEE~FkaAVefVrsLPk~G~IsqpSnDdKLeLYALYKQATeGDCN~pKPG~fD~vgRAKWdAWKaLgGMSKEEAMrKYIE 394 (462)
++++|.+|+.+|+.+++.|+ .+|+++++|+|||||||||+|||++++||+||+++|+||+||++++|||+++||++||+
T Consensus 4 ~~~~F~~A~~~vk~l~~~g~-~~ps~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gmS~eeA~~~YI~ 82 (106)
T 3fp5_A 4 SKAKFDKAVEIVQSLPKDGP-IKPTQDEQLYFYKYFKQATVGDVNISRPGLMDFTGKAKWDAWKSVEGTSKEVAYQKYVE 82 (106)
T ss_dssp CHHHHHHHHHHHHHCCSSSS-SCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcccccC-CCCCHHHHHHHHHHHHHHhcCCCCCCCCCccchHHHHHHHHHHHccCCCHHHHHHHHHH
Confidence 57899999999999987765 37999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCcc
Q 012493 395 ILSRSIPG 402 (462)
Q Consensus 395 LVeeLlP~ 402 (462)
+|++++|.
T Consensus 83 ~v~~l~~~ 90 (106)
T 3fp5_A 83 KLLEILKK 90 (106)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhcc
Confidence 99999987
No 10
>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis}
Probab=99.96 E-value=1.2e-29 Score=212.19 Aligned_cols=85 Identities=35% Similarity=0.594 Sum_probs=80.5
Q ss_pred HHHHHHHHHHhhcccCCCCCCCChHHHHHHHHhhhhhccCCCCCCCCCcccHHhHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 012493 317 RLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTIL 396 (462)
Q Consensus 317 E~FkaAVefVrsLPk~G~IsqpSnDdKLeLYALYKQATeGDCN~pKPG~fD~vgRAKWdAWKaLgGMSKEEAMrKYIELV 396 (462)
.+|.+|+..|+++++ .+|+++++|+|||||||||+|||++++||+||+++|+||+||++++|||+++||++||++|
T Consensus 12 ~~F~~A~~~vk~l~~----~~ps~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~graKw~AW~~l~gmS~eeAm~~YI~lv 87 (96)
T 2lbb_A 12 DDFDAAVKYVSNTTT----MMASNDDKLCFYKYYKQATVGDCNKPKPGMLQLQEKYKWEAWNALRGMSTESAKEAYVKLL 87 (96)
T ss_dssp STHHHHHHHHHHCCC----SCCCTTTTTHHHHHHHHTTTSSCCCCCCCSSCSHHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC----CCCCHHHHHHHHHHHHHHhcCCCCCCCCCcccHHhHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 379999999999973 2689999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCccccc
Q 012493 397 SRSIPGCIQ 405 (462)
Q Consensus 397 eeLlP~W~e 405 (462)
++++|.|.+
T Consensus 88 ~~l~~~~~~ 96 (96)
T 2lbb_A 88 DTLAPSWRN 96 (96)
T ss_dssp HHHCGGGTC
T ss_pred HHHhchhcC
Confidence 999999963
No 11
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B
Probab=98.19 E-value=7e-06 Score=71.67 Aligned_cols=83 Identities=25% Similarity=0.284 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCChHHHHHHHHhhhhhccCCCCCC--CCCcccHH------------hHHHHHHHHHc
Q 012493 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP--QPMALKVS------------ARANWNAWKQL 380 (462)
Q Consensus 315 LEE~FkaAVefVrsLPk~G~IsqpSnDdKLeLYALYKQATeGDCN~p--KPG~fD~v------------gRAKWdAWKaL 380 (462)
+.--|..+..-|-. |.+ ..+.++.+.|.||..||..||++.. .|+.+++. .+..+++|+++
T Consensus 18 ~~l~y~Q~~~dil~----g~~-~~~~~~a~~Laal~~qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~i~~~~~~~ 92 (206)
T 1mix_A 18 LNLLYVQARDDILN----GSH-PVSFDKACEFAGYQCQIQFGPHNEQKHKPGFLELKDFLPKEYIKQKGERKIFMAHKNC 92 (206)
T ss_dssp HHHHHHHHHHHHHT----TSS-CCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGSTTCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHC----Ccc-ccCHHHHHHHHHHhhhheecCCCcccccCCccchHhhCCHHHhhcccHHHHHHHHHHc
Confidence 34455555555543 332 5789999999999999999999863 46655443 67789999999
Q ss_pred CCCCHHHHHHHHHHHHHhhCccc
Q 012493 381 GNMTPEIAMEQYVTILSRSIPGC 403 (462)
Q Consensus 381 gGMSKEEAMrKYIELVeeLlP~W 403 (462)
+|||+++||.+|++++.++ |.|
T Consensus 93 ~g~s~~~A~~~yL~~~~~l-~~y 114 (206)
T 1mix_A 93 GNMSEIEAKVRYVKLARSL-KTY 114 (206)
T ss_dssp TTCCHHHHHHHHHHHHHHS-TTT
T ss_pred cCCCHHHHHHHHHHHHHhC-ccc
Confidence 9999999999999999765 655
No 12
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}
Probab=95.43 E-value=0.045 Score=49.03 Aligned_cols=84 Identities=23% Similarity=0.263 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHHHhhcccCCCCCCCChHHHHHHHHhhhhhccCCCCCC--CCCcccH-----------H-hHHHHHHHHH
Q 012493 314 ELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP--QPMALKV-----------S-ARANWNAWKQ 379 (462)
Q Consensus 314 ELEE~FkaAVefVrsLPk~G~IsqpSnDdKLeLYALYKQATeGDCN~p--KPG~fD~-----------v-gRAKWdAWKa 379 (462)
.+.--|..+..-|-. |.+ ..+.++-+.|=||-=||..||++.. .|+.+.+ . .+.=.++|++
T Consensus 28 ~l~l~ylQ~~~dil~----G~~-~~~~e~a~~LAal~~Qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~~~~~I~~~h~~ 102 (222)
T 4f7g_A 28 QLNLLYVQARDDILN----GSH-PVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKN 102 (222)
T ss_dssp HHHHHHHHHHHHHHT----TSS-CCCHHHHHHHHHHHHHHHHCSCCTTTSCSSCSCGGGTSCGGGGGGCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhC----Ccc-cCCHHHHHHHHHHHHHHHHCCCCchhcccCccchhhccCHHHHhhhhHHHHHHHHHh
Confidence 344445555444422 332 5788999999999999999999763 2332211 1 1222578999
Q ss_pred cCCCCHHHHHHHHHHHHHhhCccc
Q 012493 380 LGNMTPEIAMEQYVTILSRSIPGC 403 (462)
Q Consensus 380 LgGMSKEEAMrKYIELVeeLlP~W 403 (462)
++|||+.+|+.+|++++.++ |.|
T Consensus 103 ~~g~s~~eA~~~yL~~~~~l-~~y 125 (222)
T 4f7g_A 103 CGQMSEIEAKVRYVKLARSL-KTY 125 (222)
T ss_dssp TTTCCHHHHHHHHHHHHHTS-TTT
T ss_pred ccCCCHHHHHHHHHHHHhhc-ccc
Confidence 99999999999999999865 555
No 13
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A
Probab=95.13 E-value=0.049 Score=50.15 Aligned_cols=82 Identities=15% Similarity=0.095 Sum_probs=57.8
Q ss_pred HHHHHHHHHHhhcccCCCCCCCChHHHHHHHHhhhhhccCCCCCC--CCCccc--------HHh-----HHHH-----HH
Q 012493 317 RLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP--QPMALK--------VSA-----RANW-----NA 376 (462)
Q Consensus 317 E~FkaAVefVrsLPk~G~IsqpSnDdKLeLYALYKQATeGDCN~p--KPG~fD--------~vg-----RAKW-----dA 376 (462)
--|..+..-|- .|.+ ..+.++.+.|=||--||..||++.. .|+.++ +.. ...| .+
T Consensus 98 l~y~Q~~~dil----~g~~-~~~~e~a~~Laal~~q~~~Gd~~~~~~~~~~l~~~~~lP~~~~~~~~~~~~~~~~~I~~~ 172 (294)
T 1ef1_A 98 LFFLQVKEGIL----NDDI-YCPPETAVLLASYAVQSKYGDFNKEVHKSGYLAGDKLLPQRVLEQHKLNKDQWEERIQVW 172 (294)
T ss_dssp HHHHHHHHHHH----TTSS-CCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHHHBCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHH----cCcc-cCCHHHHHHHHHHHHHHHhCCCCccccChhhccccccCCHHHHhhcCCCHHHHHHHHHHH
Confidence 34455544443 2343 5788999999999999999999863 244321 111 2234 78
Q ss_pred HHHcCCCCHHHHHHHHHHHHHhhCcccc
Q 012493 377 WKQLGNMTPEIAMEQYVTILSRSIPGCI 404 (462)
Q Consensus 377 WKaLgGMSKEEAMrKYIELVeeLlP~W~ 404 (462)
|++++|||+.+|+.+|++++.+ +|.|-
T Consensus 173 ~~~~~g~s~~~A~~~yL~~~~~-lp~yG 199 (294)
T 1ef1_A 173 HEEHRGMLREDAVLEYLKIAQD-LEMYG 199 (294)
T ss_dssp HHHTTTCCHHHHHHHHHHHHTT-STTTT
T ss_pred HHHccCCCHHHHHHHHHHHHcc-cCccC
Confidence 9999999999999999999986 56663
No 14
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=95.00 E-value=0.053 Score=50.64 Aligned_cols=66 Identities=12% Similarity=0.086 Sum_probs=50.7
Q ss_pred CCChHHHHHHHHhhhhhccCCCCCC--CCCcccH--------Hh-----HHHH-----HHHHHcCCCCHHHHHHHHHHHH
Q 012493 337 SIGSDVKMQLYGLHKIATVGPCREP--QPMALKV--------SA-----RANW-----NAWKQLGNMTPEIAMEQYVTIL 396 (462)
Q Consensus 337 qpSnDdKLeLYALYKQATeGDCN~p--KPG~fD~--------vg-----RAKW-----dAWKaLgGMSKEEAMrKYIELV 396 (462)
..+.++.+.|=||--||..||++.. .|+.++. .. ...| .+|+++.|||+.+|+.+|++++
T Consensus 133 ~~~~e~a~~Laal~~Qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~~~~~~~I~~~~~~~~g~s~~eA~~~yL~~~ 212 (314)
T 1h4r_A 133 YCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMTPEMWEERITAWYAEHRGRARDEAEMEYLKIA 212 (314)
T ss_dssp CCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHTTSCCCHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHCCCCccccchhhcchhhcCCHHHHhhccCCHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 5788999999999999999999763 3433211 00 1233 7899999999999999999999
Q ss_pred HhhCccc
Q 012493 397 SRSIPGC 403 (462)
Q Consensus 397 eeLlP~W 403 (462)
.+ +|.|
T Consensus 213 ~~-lp~y 218 (314)
T 1h4r_A 213 QD-LEMY 218 (314)
T ss_dssp TT-STTT
T ss_pred hc-cCcc
Confidence 76 4665
No 15
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A
Probab=94.90 E-value=0.069 Score=50.26 Aligned_cols=66 Identities=12% Similarity=0.017 Sum_probs=50.4
Q ss_pred CCChHHHHHHHHhhhhhccCCCCCC--CCCcc----------cHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHhhCccc
Q 012493 337 SIGSDVKMQLYGLHKIATVGPCREP--QPMAL----------KVSARANWNAWKQLGNMTPEIAMEQYVTILSRSIPGC 403 (462)
Q Consensus 337 qpSnDdKLeLYALYKQATeGDCN~p--KPG~f----------D~vgRAKWdAWKaLgGMSKEEAMrKYIELVeeLlP~W 403 (462)
..+.++-+.|=||.=||..||++.. .|+.+ .-..+.=-.+|+++.|||+.+|+.+|++++.+ +|.|
T Consensus 127 ~c~~e~a~~LAAl~~Qae~Gd~~~~~~~~~yl~~~~~~P~~~~~~~~~I~~~h~~~~g~s~~eA~~~yL~~a~~-l~~y 204 (296)
T 3qij_A 127 PCSFATLALLGSYTIQSELGDYDPELHGVDYVSDFKLAPNQTKELEEKVMELHKSYRSMTPAQADLEFLENAKK-LSMY 204 (296)
T ss_dssp CCCHHHHHHHHHHHHHHHHCSCCHHHHTTCCCTTSCCSSSCCHHHHHHHHHHHHTCCSCCHHHHHHHHHHHHTT-STTT
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCccccchhhCcHhhcCCcCHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHhc-cccc
Confidence 5688999999999999999998741 22221 11223334789999999999999999999987 5665
No 16
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=93.97 E-value=0.16 Score=48.69 Aligned_cols=66 Identities=21% Similarity=0.272 Sum_probs=50.2
Q ss_pred CCChHHHHHHHHhhhhhccCCCCCCC--CCcccH-----------H-hHHHHHHHHHcCCCCHHHHHHHHHHHHHhhCcc
Q 012493 337 SIGSDVKMQLYGLHKIATVGPCREPQ--PMALKV-----------S-ARANWNAWKQLGNMTPEIAMEQYVTILSRSIPG 402 (462)
Q Consensus 337 qpSnDdKLeLYALYKQATeGDCN~pK--PG~fD~-----------v-gRAKWdAWKaLgGMSKEEAMrKYIELVeeLlP~ 402 (462)
..+.++-+.|=||.=||..||++... |+.+++ . .+.=-.+|++++|||+.+|+.+|++++.++ |.
T Consensus 200 ~c~~e~a~~LAAl~~qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~~e~~I~~~~~~~~g~s~~eA~~~yL~~~~~l-~~ 278 (371)
T 3ivf_A 200 PVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCGQMSEIEAKVRYVKLARSL-KT 278 (371)
T ss_dssp CCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHS-TT
T ss_pred ecCHHHHHHHHHHHHHHHhCCCChhhcccchhcccccCCHHHhCchHHHHHHHHHHHccCCCHHHHHHHHHHHHhcc-cc
Confidence 57889999999999999999998632 322110 1 222347899999999999999999999764 55
Q ss_pred c
Q 012493 403 C 403 (462)
Q Consensus 403 W 403 (462)
|
T Consensus 279 y 279 (371)
T 3ivf_A 279 Y 279 (371)
T ss_dssp T
T ss_pred c
Confidence 5
No 17
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=93.01 E-value=0.19 Score=52.30 Aligned_cols=67 Identities=22% Similarity=0.291 Sum_probs=51.6
Q ss_pred CCChHHHHHHHHhhhhhccCCCCCC--CCCccc---H-----Hh-----HHHH-----HHHHHcCCCCHHHHHHHHHHHH
Q 012493 337 SIGSDVKMQLYGLHKIATVGPCREP--QPMALK---V-----SA-----RANW-----NAWKQLGNMTPEIAMEQYVTIL 396 (462)
Q Consensus 337 qpSnDdKLeLYALYKQATeGDCN~p--KPG~fD---~-----vg-----RAKW-----dAWKaLgGMSKEEAMrKYIELV 396 (462)
..+.++-+.|=||--||..||++.. .|+.++ + .. ...| ..|+++.|||+.+|+..|++++
T Consensus 116 ~c~~e~a~~LAAL~lQae~GDy~~~~~~~~yl~~~~~lP~~vl~~~~~s~e~~~~~I~~~hk~l~G~s~~eA~~~yL~~a 195 (575)
T 2i1j_A 116 YCPPETSVLLASYAVQARHGDHNPAVHGPGFLANDRLLPQRVTDQHKMSREEWEQSITNWWQEHRGMLREDAMMEYLKIA 195 (575)
T ss_dssp CCCHHHHHHHHHHHHHHHHCSCCTTTCCTTTTTTCCCSCHHHHHTBCCCHHHHHHHHHHHHGGGTTCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhcCCChhhcccccccccccCCHHHHhhcCCCHHHHHHHHHHHHHHccCCCHHHHHHHHHHHH
Confidence 5788999999999999999999863 344331 1 11 2344 6799999999999999999999
Q ss_pred HhhCcccc
Q 012493 397 SRSIPGCI 404 (462)
Q Consensus 397 eeLlP~W~ 404 (462)
.+ +|.|-
T Consensus 196 ~~-lp~YG 202 (575)
T 2i1j_A 196 QD-LEMYG 202 (575)
T ss_dssp TT-STTTT
T ss_pred Hh-ccccC
Confidence 86 47664
No 18
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A
Probab=90.11 E-value=0.98 Score=45.68 Aligned_cols=84 Identities=20% Similarity=0.249 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCChHHHHHHHHhhhhhccCCCCCCC--CCccc------HHh----------------
Q 012493 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQ--PMALK------VSA---------------- 370 (462)
Q Consensus 315 LEE~FkaAVefVrsLPk~G~IsqpSnDdKLeLYALYKQATeGDCN~pK--PG~fD------~vg---------------- 370 (462)
+.--|..+..-|-. |.+ ..+.++-+.|=||.-|+..||++... +..-+ +..
T Consensus 321 ~~lly~Q~~~dil~----G~~-~~~~e~a~~LAAl~lQ~~~GD~~~~~~~~~l~~~lP~~~l~~~~~~~~k~~s~~~~~l 395 (555)
T 3au4_A 321 FAFMFEQAHEAVIH----GHH-PAPEENLQVLAALRLQYLQGDYTLHAAIPPLEEVYSLQRLKARISQSTKTFSFRTGSV 395 (555)
T ss_dssp HHHHHHHHHHHHHT----TCS-CCCHHHHHHHHHHHHHHHHCSCCTTCCCCCGGGTSCCHHHHHHHHHTTCCEECCTTSC
T ss_pred HHhhHHHHHHHHHC----CCC-CCCHHHHHHHHHHHHHHHcCCCccccchhhhhhhCCHHHhhhhhcccccccccccccc
Confidence 34456666655532 332 56789999999999999999997632 11100 000
Q ss_pred ----------HHH-------------HHHHHHcCCCCHHHHHHHHHHHHHhhCcccc
Q 012493 371 ----------RAN-------------WNAWKQLGNMTPEIAMEQYVTILSRSIPGCI 404 (462)
Q Consensus 371 ----------RAK-------------WdAWKaLgGMSKEEAMrKYIELVeeLlP~W~ 404 (462)
... ...|+++.|||+.+|+.+|++++.++ |.|-
T Consensus 396 ~~~~~~~~~~~~~W~~~~~~~~~~~I~~~~~~~~g~s~~eA~~~yL~~~~~l-p~yG 451 (555)
T 3au4_A 396 VRQKVEEEQMLDMWIKEEVSSARASIIDKWRKFQGMNQEQAMAKYMALIKEW-PGYG 451 (555)
T ss_dssp CEECCCCHHHHHHHTHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTS-TTTT
T ss_pred ccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhC-CCcC
Confidence 112 36789999999999999999999876 6663
No 19
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A
Probab=87.26 E-value=1 Score=42.49 Aligned_cols=80 Identities=15% Similarity=0.092 Sum_probs=53.6
Q ss_pred HHHHHHHHHhhcccCCCCCCCChHHHHHHHHhhhhhccCCCCC--CCCCccc---H---------------HhHHHHHHH
Q 012493 318 LFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCRE--PQPMALK---V---------------SARANWNAW 377 (462)
Q Consensus 318 ~FkaAVefVrsLPk~G~IsqpSnDdKLeLYALYKQATeGDCN~--pKPG~fD---~---------------vgRAKWdAW 377 (462)
-|..+..-|-. |.+ ..+.++-+.|=||--||..||++. ..|+.++ + ....=..+|
T Consensus 117 ~y~Q~~~dil~----G~~-~c~~e~a~~LAAl~~q~e~Gd~~~~~~~~~~l~~~~l~~~lP~~~~~~~~~~~~~~I~~~h 191 (322)
T 4dxa_B 117 LFDEARYNLLK----GFY-TAPDAKLITLASLLLQIVYGNYESKKHKQGFLNEENLKSIVPVTKLKSKAPHWTNRILHEY 191 (322)
T ss_dssp HHHHHHHHHHH----TCC-CCCHHHHHHHHHHHHHHHHCSCCHHHHSSSCSCHHHHTTTSCTTTTTTTGGGSHHHHHHHH
T ss_pred HHHHHHHHHHC----Ccc-cCCHHHHHHHHHHHHHHHhCCCCcccccccccchhhhhhhCCHHHHhcCHHHHHHHHHHHH
Confidence 45555554432 232 567899999999999999999864 2344322 0 112335789
Q ss_pred HHc---CCCCHH--HHHHHHHHHHHhhCccc
Q 012493 378 KQL---GNMTPE--IAMEQYVTILSRSIPGC 403 (462)
Q Consensus 378 KaL---gGMSKE--EAMrKYIELVeeLlP~W 403 (462)
+++ .|||++ +|+.+|++++.++ |.|
T Consensus 192 ~~~~~~~g~s~~~a~a~~~yL~~~~~l-p~y 221 (322)
T 4dxa_B 192 KNLSTSEGVSKEMHHLQRMFLQNCWEI-PTY 221 (322)
T ss_dssp HHHHC--CCCCCHHHHHHHHHHHHHTS-TTT
T ss_pred HhcccccCCChhHHHHHHHHHHHHhcC-CCc
Confidence 999 999975 4699999999854 555
No 20
>2al6_A Focal adhesion kinase 1; transferase; 2.35A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 2j0m_A* 2aeh_A
Probab=86.84 E-value=0.88 Score=44.16 Aligned_cols=83 Identities=13% Similarity=0.205 Sum_probs=55.2
Q ss_pred HHHHHHHHHH-HHhhcccCCCCCCCChHHHHHHHHhhhhhccCCCCCCCC----C------------cc--cH-------
Q 012493 315 LERLFGAAVA-FVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQP----M------------AL--KV------- 368 (462)
Q Consensus 315 LEE~FkaAVe-fVrsLPk~G~IsqpSnDdKLeLYALYKQATeGDCN~pKP----G------------~f--D~------- 368 (462)
+.--|.++.. +++.. +...+.+.-+.|-||--|+..||++...+ + ++ ++
T Consensus 114 ~~~~y~Q~r~Dil~g~-----~~~~~~e~al~LAaL~~q~~~gD~~~~~~~~k~~~~~l~k~~~l~~flP~~~~~~~~~~ 188 (375)
T 2al6_A 114 LNFFYQQVKNDYMLEI-----ADQVDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEVLEKDVGLRRFFPKSLLDSVKAK 188 (375)
T ss_dssp HHHHHHHHHHHHHHHT-----TTTSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHTTCGGGTSCHHHHHSSCHH
T ss_pred HHHHHHHHHHHHHcCC-----CccCCHHHHHHHHHHHHHHHhhhccchhhcccCCHHHhhhcccHHHhCCHHHHHHhChH
Confidence 3445555544 34432 12468899999999999999999853211 0 00 01
Q ss_pred -HhHHHHHHHHHcCCCCHHHHHHHHHHHHHhhCccc
Q 012493 369 -SARANWNAWKQLGNMTPEIAMEQYVTILSRSIPGC 403 (462)
Q Consensus 369 -vgRAKWdAWKaLgGMSKEEAMrKYIELVeeLlP~W 403 (462)
..+.=...|+++.||++++||.+|++++.+ +|.|
T Consensus 189 ~~~k~I~~~~k~~~g~s~~eAk~~yL~~~~~-l~~y 223 (375)
T 2al6_A 189 TLRKLIQQTFRQFANLNREESILKFFEILSP-VYRF 223 (375)
T ss_dssp HHHHHHHHHHHTTTTCCHHHHHHHHHHHHTT-TCCC
T ss_pred HHHHHHHHHHHHhhCCCHHHHHHHHHHHHhh-cccC
Confidence 111124788899999999999999999998 4655
No 21
>4eku_A Protein-tyrosine kinase 2-beta; proline-rich tyrosine kinase 2, FERM domain, transferase; 3.25A {Homo sapiens}
Probab=74.48 E-value=4.5 Score=40.21 Aligned_cols=87 Identities=11% Similarity=0.110 Sum_probs=57.9
Q ss_pred chHHHHHHHHHH-HHhhcccCCCCCCCChHHHHHHHHhhhhhccCCCCCCC----C---------C---cc--cHH----
Q 012493 313 TELERLFGAAVA-FVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQ----P---------M---AL--KVS---- 369 (462)
Q Consensus 313 SELEE~FkaAVe-fVrsLPk~G~IsqpSnDdKLeLYALYKQATeGDCN~pK----P---------G---~f--D~v---- 369 (462)
..++--|.++.. +++... ...+.+.-++|-||--|+-.||++... + + ++ ++.
T Consensus 132 ~~~~ylY~Q~r~D~l~g~~-----~~~~~e~al~LAaL~~q~~~gd~~~~a~~~k~~~~~l~k~~~lk~flP~~l~~~ik 206 (392)
T 4eku_A 132 TTLLYFYQQLRNDYMQRYA-----SKVSEGMALQLGCLELRRFFKDMPHNALDKKSNFELLEKEVGLDLFFPKQMQENLK 206 (392)
T ss_dssp HHHHHHHHHHHHHHHHHTT-----TTSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHHTCGGGTSCHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHcCCC-----CCCCHHHHHHHHHHHHHHHhhhcchhhhccCCCHHHHhhhccHHHhcCHHHHhhcC
Confidence 345556755554 445331 246888999999999999999876411 0 0 01 111
Q ss_pred ----hHHHHHHHHHcCCCCHHHHHHHHHHHHHhhCccccc
Q 012493 370 ----ARANWNAWKQLGNMTPEIAMEQYVTILSRSIPGCIQ 405 (462)
Q Consensus 370 ----gRAKWdAWKaLgGMSKEEAMrKYIELVeeLlP~W~e 405 (462)
.+.=....+++.||+..+||.+|+..+.++ |.|..
T Consensus 207 ~k~~rk~I~~~~kk~~~ls~~eakl~YL~~l~~L-p~yG~ 245 (392)
T 4eku_A 207 PKQFRKMIQQTFQQYASLREEECVMKFFNTLAGF-ANIDQ 245 (392)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTS-SCCSC
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh-hccCc
Confidence 111134777889999999999999999987 87743
No 22
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=72.28 E-value=9.1 Score=40.48 Aligned_cols=81 Identities=15% Similarity=0.101 Sum_probs=53.2
Q ss_pred HHHHHHHHHhhcccCCCCCCCChH-HHHHHHHhhhhhccCCCCCCC----------CCc-ccH-HhHHHH-----HHHHH
Q 012493 318 LFGAAVAFVGNKCNAGRISSIGSD-VKMQLYGLHKIATVGPCREPQ----------PMA-LKV-SARANW-----NAWKQ 379 (462)
Q Consensus 318 ~FkaAVefVrsLPk~G~IsqpSnD-dKLeLYALYKQATeGDCN~pK----------PG~-fD~-vgRAKW-----dAWKa 379 (462)
-|..+..-|-. |.+ ..+.+ +...|=||.-||..||+.... |.. +.- .....| .+|++
T Consensus 373 lYlQ~k~dIl~----Grl-pc~~E~~a~~LAAl~~Qae~Gd~~~~~~~~~~L~~~lP~~~l~~~~~~~~w~~~I~~~hkk 447 (655)
T 3pvl_A 373 IYQQVVRGVKF----GEY-RCEKEDDLAELASQQYFVDYGSEMILERLLSLVPTYIPDREITPLKNLEKWAQLAIAAHKK 447 (655)
T ss_dssp HHHHHHHHHHH----TSS-CCSSHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHSCGGGCCSSSCHHHHHHHHHHHHHH
T ss_pred HHHHHhccccc----Ccc-CCChHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHhCCHHHHhccCCHHHHHHHHHHHHHh
Confidence 44555544432 332 34544 889999999999999986421 211 111 123344 67888
Q ss_pred c----CCCCHHHHHHHHHHHHHhhCccc
Q 012493 380 L----GNMTPEIAMEQYVTILSRSIPGC 403 (462)
Q Consensus 380 L----gGMSKEEAMrKYIELVeeLlP~W 403 (462)
+ +|||+.+|+.+|++++.+-+|-|
T Consensus 448 ~~~~~~g~s~~eAk~~yL~~a~~~lp~Y 475 (655)
T 3pvl_A 448 GIYAQRRTDSQKVKEDVVNYARFKWPLL 475 (655)
T ss_dssp HHHTTCSSCHHHHHHHHHHHHHHHCTTT
T ss_pred hhccccCCCHHHHHHHHHHHHHHhcccc
Confidence 8 99999999999999995555665
No 23
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=29.18 E-value=50 Score=33.94 Aligned_cols=63 Identities=21% Similarity=0.332 Sum_probs=46.5
Q ss_pred CCChHHHHHHHHhhhhhccCCCCCCC--------------------CCcc----c--HHhHHHHHHHHHcCCCCHHHHHH
Q 012493 337 SIGSDVKMQLYGLHKIATVGPCREPQ--------------------PMAL----K--VSARANWNAWKQLGNMTPEIAME 390 (462)
Q Consensus 337 qpSnDdKLeLYALYKQATeGDCN~pK--------------------PG~f----D--~vgRAKWdAWKaLgGMSKEEAMr 390 (462)
..+.+.-|.|-+|--|+..||++..+ |..+ . -..+.=.+.|+++.++++++||-
T Consensus 132 ~~~~~~al~La~l~~~~~~~d~~~~a~~~~~~~~~~~k~~~~~~fiP~~~~~~~~~~~~~k~i~~~~k~~~~~~~~~~~l 211 (656)
T 2j0j_A 132 QVDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEVLEKDVGLRRFFPKSLLDSVKAKTLRKLIQQTFRQFANLNREESIL 211 (656)
T ss_dssp GSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHTTTGGGTSCHHHHHHSCHHHHHHHHHHHHGGGTTCCHHHHHH
T ss_pred cccHhHHHHHHHHHHHHHhhhccchhhhcCCCHHHHHhhccHHHhCCHHHHHHhhhhHHHHHHHHHHHHHhcCCHHHHHH
Confidence 36789999999999999999995431 2100 0 01111267889999999999999
Q ss_pred HHHHHHHhh
Q 012493 391 QYVTILSRS 399 (462)
Q Consensus 391 KYIELVeeL 399 (462)
+|++.+..+
T Consensus 212 k~l~~l~~~ 220 (656)
T 2j0j_A 212 KFFEILSPV 220 (656)
T ss_dssp HHHHHHGGG
T ss_pred HHHHHhccc
Confidence 999988873
Done!