BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>012495
MFFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPMAIGFMLLYTKLADKLSKQ
ALFYTVIVPFIAFFGAFGFLLYPLSNAIHPQALADKLLNILGPRFLGPLAIMRIWSFCLF
YVMAELWGSVVISVLFWGFANQITTVDEAKRFYPLFGLGANVALIFSGRTVKYFSNLRKN
LGPGVDGWAVSLKGMMSIVVLMGLSICGLYWWVNNNVELPTRSKKKKEKPKMGTMESLKF
LVSSRYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSSFMGDFSTATGIATFTM
MLLSQFVFDKFGWGVAAKITPTVLLLTGVGFFSLLLFGDPLGPALAKFGMTPLLAAVYVG
AMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILT
FGSLANSTPYLGGDTFGDCSCMVRSSQVFRYPIYSFASGRRA

High Scoring Gene Products

Symbol, full name Information P value
ATNTT2
AT1G15500
protein from Arabidopsis thaliana 2.6e-196
NTT1
AT1G80300
protein from Arabidopsis thaliana 1.1e-195

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  012495
        (462 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2196588 - symbol:ATNTT2 species:3702 "Arabidop...  1901  2.6e-196  1
TAIR|locus:2034235 - symbol:NTT1 "nucleotide transporter ...  1895  1.1e-195  1


>TAIR|locus:2196588 [details] [associations]
            symbol:ATNTT2 species:3702 "Arabidopsis thaliana"
            [GO:0005471 "ATP:ADP antiporter activity" evidence=IEA;ISS]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0016021
            "integral to membrane" evidence=IEA] [GO:0009941 "chloroplast
            envelope" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0009507 "chloroplast" evidence=IDA] [GO:0009536 "plastid"
            evidence=IDA] InterPro:IPR004667 Pfam:PF03219 GO:GO:0016021
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0009941
            GO:GO:0031969 EMBL:AC013453 GO:GO:0005471 eggNOG:COG3202
            HOGENOM:HOG000238123 KO:K03301 ProtClustDB:CLSN2679486
            TIGRFAMs:TIGR00769 EMBL:X94626 EMBL:AY081350 EMBL:AY128844
            EMBL:AY084374 IPI:IPI00530510 PIR:G86288 RefSeq:NP_173003.1
            UniGene:At.14771 UniGene:At.73068 ProteinModelPortal:P92935
            STRING:P92935 PaxDb:P92935 PRIDE:P92935 EnsemblPlants:AT1G15500.1
            GeneID:838120 KEGG:ath:AT1G15500 GeneFarm:3069 TAIR:At1g15500
            InParanoid:P92935 OMA:RLGWLIS PhylomeDB:P92935
            Genevestigator:P92935 GermOnline:AT1G15500 Uniprot:P92935
        Length = 618

 Score = 1901 (674.2 bits), Expect = 2.6e-196, P = 2.6e-196
 Identities = 372/432 (86%), Positives = 387/432 (89%)

Query:     1 MFFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPMAIGFMLLYTKLADKLSKQ 60
             MFFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPMAIGFMLLYTKL++ LSK+
Sbjct:   119 MFFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPMAIGFMLLYTKLSNVLSKK 178

Query:    61 ALFYTXXXXXXXXXXXXXXXXXXLSNAIHPQALADKLLNILGPRFLGPLAIMRIWSFCLF 120
             ALFYT                  LSN IHP+ALADKLL  LGPRF+GPLAIMRIWSFCLF
Sbjct:   179 ALFYTVIVPFIVYFGAFGFVMYPLSNLIHPEALADKLLATLGPRFMGPLAIMRIWSFCLF 238

Query:   121 YVMAELWGSVVISVLFWGFANQITTVDEAKRFYPLFGLGANVALIFSGRTVKYFSNLRKN 180
             YVMAELWGSVV+SVLFWGFANQITTVDEAK+FYPLFGLGANVALIFSGRTVKYFSN+RKN
Sbjct:   239 YVMAELWGSVVVSVLFWGFANQITTVDEAKKFYPLFGLGANVALIFSGRTVKYFSNMRKN 298

Query:   181 LGPGVDGWAVSLKGMMSIVVLMGLSICGLYWWVNNNVELPTRSXXXXXXXXMGTMESLKF 240
             LGPGVDGWAVSLK MMSIVV MGL+IC LYWWVN  V LPTRS        MGTMESLKF
Sbjct:   299 LGPGVDGWAVSLKAMMSIVVGMGLAICFLYWWVNRYVPLPTRSKKKKVKPQMGTMESLKF 358

Query:   241 LVSSRYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSSFMGDFSTATGIATFTM 300
             LVSS YIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYS+FMGDFST TGIATFTM
Sbjct:   359 LVSSPYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSAFMGDFSTCTGIATFTM 418

Query:   301 MLLSQFVFDKFGWGVAAKITPTVLLLTGVGFFSLLLFGDPLGPALAKFGMTPLLAAVYVG 360
             MLLSQ+VF K+GWGVAAKITPTVLLLTGV FFSL+LFG P  P +AK GMTPLLAAVYVG
Sbjct:   419 MLLSQYVFKKYGWGVAAKITPTVLLLTGVAFFSLILFGGPFAPLVAKLGMTPLLAAVYVG 478

Query:   361 AMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILT 420
             A+QNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILT
Sbjct:   479 ALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILT 538

Query:   421 FGSLANSTPYLG 432
             FGSLANSTPYLG
Sbjct:   539 FGSLANSTPYLG 550


>TAIR|locus:2034235 [details] [associations]
            symbol:NTT1 "nucleotide transporter 1" species:3702
            "Arabidopsis thaliana" [GO:0005471 "ATP:ADP antiporter activity"
            evidence=IEA;ISS;IDA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=ISM] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0009941 "chloroplast envelope"
            evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009536
            "plastid" evidence=IDA] InterPro:IPR004667 Pfam:PF03219
            GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
            GO:GO:0016020 GO:GO:0009941 GO:GO:0031969 GO:GO:0005471
            EMBL:AC018848 EMBL:Z49227 EMBL:AF428316 EMBL:AY045903
            IPI:IPI00527573 PIR:E96834 PIR:S68205 RefSeq:NP_178146.1
            UniGene:At.23897 UniGene:At.72668 ProteinModelPortal:Q39002
            IntAct:Q39002 STRING:Q39002 TCDB:2.A.12.2.1 PaxDb:Q39002
            PRIDE:Q39002 EnsemblPlants:AT1G80300.1 GeneID:844370
            KEGG:ath:AT1G80300 GeneFarm:3067 TAIR:At1g80300 eggNOG:COG3202
            HOGENOM:HOG000238123 InParanoid:Q39002 KO:K03301 OMA:AYPNFKW
            PhylomeDB:Q39002 ProtClustDB:CLSN2679486 Genevestigator:Q39002
            GermOnline:AT1G80300 TIGRFAMs:TIGR00769 Uniprot:Q39002
        Length = 624

 Score = 1895 (672.1 bits), Expect = 1.1e-195, P = 1.1e-195
 Identities = 369/432 (85%), Positives = 388/432 (89%)

Query:     1 MFFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPMAIGFMLLYTKLADKLSKQ 60
             MFFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPMAIGFMLLYTKL++ LSK+
Sbjct:   122 MFFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPMAIGFMLLYTKLSNVLSKK 181

Query:    61 ALFYTXXXXXXXXXXXXXXXXXXLSNAIHPQALADKLLNILGPRFLGPLAIMRIWSFCLF 120
             ALFYT                  LSN IHP+ALADKLL  LGPRF+GP+AI+RIWSFCLF
Sbjct:   182 ALFYTVIVPFIIYFGAFGFVMYPLSNYIHPEALADKLLTTLGPRFMGPIAILRIWSFCLF 241

Query:   121 YVMAELWGSVVISVLFWGFANQITTVDEAKRFYPLFGLGANVALIFSGRTVKYFSNLRKN 180
             YVMAELWGSVV+SVLFWGFANQITTVDEAK+FYPLFGLGANVALIFSGRTVKYFSNLRKN
Sbjct:   242 YVMAELWGSVVVSVLFWGFANQITTVDEAKKFYPLFGLGANVALIFSGRTVKYFSNLRKN 301

Query:   181 LGPGVDGWAVSLKGMMSIVVLMGLSICGLYWWVNNNVELPTRSXXXXXXXXMGTMESLKF 240
             LGPGVDGWAVSLK MMSIVV MGL+IC LYWWVN  V LPTRS        MGTMESLKF
Sbjct:   302 LGPGVDGWAVSLKAMMSIVVGMGLAICLLYWWVNRYVPLPTRSKNKKEKPKMGTMESLKF 361

Query:   241 LVSSRYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSSFMGDFSTATGIATFTM 300
             LVSS YIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYS+FMGDFST TG+ATFTM
Sbjct:   362 LVSSPYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSAFMGDFSTCTGVATFTM 421

Query:   301 MLLSQFVFDKFGWGVAAKITPTVLLLTGVGFFSLLLFGDPLGPALAKFGMTPLLAAVYVG 360
             MLLSQ+VF+K+GWGVAAKITPTVLLLTGV FFSL+LFG P  P +AK GMTPLLAAVYVG
Sbjct:   422 MLLSQYVFNKYGWGVAAKITPTVLLLTGVAFFSLILFGGPFAPLVAKLGMTPLLAAVYVG 481

Query:   361 AMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILT 420
             A+QNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMIL+
Sbjct:   482 ALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILS 541

Query:   421 FGSLANSTPYLG 432
             FGSLANSTPYLG
Sbjct:   542 FGSLANSTPYLG 553


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.140   0.432    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      462       436   0.00088  118 3  11 22  0.45    33
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  619 (66 KB)
  Total size of DFA:  252 KB (2134 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  31.95u 0.10s 32.05t   Elapsed:  00:00:02
  Total cpu time:  31.95u 0.10s 32.05t   Elapsed:  00:00:02
  Start:  Mon May 20 21:28:57 2013   End:  Mon May 20 21:28:59 2013

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