Query 012500
Match_columns 462
No_of_seqs 499 out of 1057
Neff 11.3
Searched_HMMs 46136
Date Fri Mar 29 03:17:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012500.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012500hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2271 UhpC Sugar phosphate p 100.0 1.2E-39 2.6E-44 284.4 21.3 374 16-425 52-432 (448)
2 COG2814 AraJ Arabinose efflux 100.0 3.2E-38 6.9E-43 280.0 29.0 346 16-425 36-384 (394)
3 PRK03545 putative arabinose tr 100.0 2.7E-36 5.8E-41 282.2 29.5 336 26-423 39-376 (390)
4 PRK11663 regulatory protein Uh 100.0 2.6E-36 5.6E-41 285.6 29.3 375 13-423 43-420 (434)
5 PRK09556 uhpT sugar phosphate 100.0 2E-36 4.2E-41 289.2 27.5 370 16-424 52-446 (467)
6 KOG1330 Sugar transporter/spin 100.0 2.1E-37 4.4E-42 273.1 18.6 363 4-406 33-417 (493)
7 TIGR00903 2A0129 major facilit 100.0 3.1E-36 6.7E-41 276.5 25.8 354 8-422 6-360 (368)
8 TIGR02332 HpaX 4-hydroxyphenyl 100.0 2.4E-36 5.2E-41 283.4 24.3 361 26-415 38-409 (412)
9 PRK10642 proline/glycine betai 100.0 2.5E-35 5.4E-40 282.9 29.0 336 39-418 63-421 (490)
10 TIGR00893 2A0114 d-galactonate 100.0 2.1E-35 4.6E-40 278.0 26.4 380 10-423 11-395 (399)
11 PRK09705 cynX putative cyanate 100.0 5.1E-35 1.1E-39 273.1 27.7 345 12-423 28-377 (393)
12 TIGR00892 2A0113 monocarboxyla 100.0 6.2E-35 1.3E-39 277.0 25.3 367 26-424 49-418 (455)
13 PRK10406 alpha-ketoglutarate t 100.0 2.8E-34 6E-39 271.7 29.3 358 10-423 39-420 (432)
14 TIGR01299 synapt_SV2 synaptic 100.0 4.1E-35 8.8E-40 286.0 24.1 394 13-422 187-729 (742)
15 PRK11551 putative 3-hydroxyphe 100.0 1.8E-34 3.8E-39 272.0 27.7 354 13-421 35-390 (406)
16 PLN00028 nitrate transmembrane 100.0 4.6E-34 1E-38 272.4 27.9 359 16-426 59-432 (476)
17 PRK09952 shikimate transporter 100.0 1.1E-33 2.4E-38 267.6 29.4 335 41-424 72-430 (438)
18 PRK11273 glpT sn-glycerol-3-ph 100.0 1.2E-33 2.7E-38 268.7 29.4 366 27-426 59-434 (452)
19 PRK10213 nepI ribonucleoside t 100.0 2.2E-33 4.8E-38 261.7 30.1 327 26-415 50-379 (394)
20 PRK10091 MFS transport protein 100.0 2.2E-33 4.8E-38 261.5 29.1 345 16-425 26-374 (382)
21 TIGR00890 2A0111 Oxalate/Forma 100.0 8E-34 1.7E-38 265.3 25.7 347 13-418 23-373 (377)
22 TIGR00900 2A0121 H+ Antiporter 100.0 8.4E-34 1.8E-38 263.9 25.5 338 13-403 19-365 (365)
23 PRK03699 putative transporter; 100.0 3.3E-33 7.1E-38 261.5 28.9 352 11-426 25-379 (394)
24 TIGR00887 2A0109 phosphate:H+ 100.0 1.9E-33 4.1E-38 270.9 27.7 378 35-439 58-499 (502)
25 TIGR00894 2A0114euk Na(+)-depe 100.0 8.4E-34 1.8E-38 271.6 24.0 363 25-422 70-445 (465)
26 TIGR00881 2A0104 phosphoglycer 100.0 1.3E-33 2.8E-38 264.1 23.8 359 10-406 12-376 (379)
27 PRK10489 enterobactin exporter 100.0 5.1E-33 1.1E-37 262.5 27.8 342 15-415 39-387 (417)
28 COG2223 NarK Nitrate/nitrite t 100.0 6.2E-32 1.3E-36 236.9 30.9 342 24-424 42-398 (417)
29 PRK12307 putative sialic acid 100.0 6.1E-33 1.3E-37 263.2 26.7 340 14-403 39-385 (426)
30 TIGR00891 2A0112 putative sial 100.0 5.3E-33 1.2E-37 262.3 26.0 362 13-411 32-400 (405)
31 PRK14995 methyl viologen resis 100.0 4.3E-33 9.3E-38 267.6 25.1 367 13-401 26-413 (495)
32 PRK15402 multidrug efflux syst 100.0 1.9E-32 4.2E-37 257.8 28.9 327 25-406 42-375 (406)
33 PRK15075 citrate-proton sympor 100.0 4.4E-32 9.6E-37 256.9 29.8 339 10-404 32-397 (434)
34 KOG2533 Permease of the major 100.0 7.8E-33 1.7E-37 257.3 22.5 343 17-394 67-423 (495)
35 PRK05122 major facilitator sup 100.0 9.8E-32 2.1E-36 252.6 30.3 339 16-423 38-385 (399)
36 TIGR00898 2A0119 cation transp 100.0 6.2E-33 1.3E-37 268.8 22.8 366 26-422 119-490 (505)
37 TIGR00899 2A0120 sugar efflux 100.0 7.7E-32 1.7E-36 251.6 29.3 346 16-423 20-370 (375)
38 PRK11646 multidrug resistance 100.0 4.3E-32 9.4E-37 253.6 27.5 319 26-403 41-361 (400)
39 KOG0569 Permease of the major 100.0 3E-32 6.5E-37 249.6 25.2 391 31-445 58-471 (485)
40 PRK15034 nitrate/nitrite trans 100.0 1.7E-31 3.7E-36 246.2 30.4 335 26-424 65-451 (462)
41 TIGR00712 glpT glycerol-3-phos 100.0 5.3E-32 1.2E-36 256.6 27.7 364 26-423 56-429 (438)
42 PRK15403 multidrug efflux syst 100.0 1.1E-31 2.3E-36 251.9 29.1 322 25-401 45-373 (413)
43 KOG2532 Permease of the major 100.0 5.2E-33 1.1E-37 258.1 19.4 365 25-424 67-444 (466)
44 PRK10077 xylE D-xylose transpo 100.0 1.5E-32 3.3E-37 264.6 23.2 383 27-441 51-470 (479)
45 PRK10504 putative transporter; 100.0 8.4E-32 1.8E-36 258.5 27.4 366 15-403 32-417 (471)
46 TIGR00710 efflux_Bcr_CflA drug 100.0 2E-31 4.2E-36 249.8 28.4 319 26-400 35-360 (385)
47 PRK10473 multidrug efflux syst 100.0 3.2E-31 6.9E-36 248.4 29.8 323 16-403 26-351 (392)
48 TIGR00711 efflux_EmrB drug res 100.0 3E-32 6.5E-37 263.1 22.4 367 13-401 22-410 (485)
49 PF07690 MFS_1: Major Facilita 100.0 1.4E-32 3.1E-37 254.3 19.2 320 26-392 27-352 (352)
50 TIGR00883 2A0106 metabolite-pr 100.0 1.8E-31 3.8E-36 251.0 26.8 354 9-415 9-389 (394)
51 PRK09874 drug efflux system pr 100.0 2.6E-31 5.6E-36 250.9 27.9 350 15-423 36-394 (408)
52 TIGR00897 2A0118 polyol permea 100.0 6.7E-31 1.4E-35 246.4 30.5 349 16-423 36-397 (402)
53 PRK11195 lysophospholipid tran 100.0 5.8E-31 1.2E-35 245.4 29.4 347 26-429 33-382 (393)
54 TIGR00879 SP MFS transporter, 100.0 4.1E-32 9E-37 262.2 21.5 374 30-423 70-466 (481)
55 PRK03893 putative sialic acid 100.0 2.1E-31 4.5E-36 257.7 26.2 372 15-414 42-440 (496)
56 PRK12382 putative transporter; 100.0 7.8E-31 1.7E-35 245.8 28.4 331 26-423 46-385 (392)
57 PRK10133 L-fucose transporter; 100.0 9E-31 2E-35 246.7 28.8 342 13-414 46-420 (438)
58 PRK11102 bicyclomycin/multidru 100.0 9.9E-31 2.1E-35 244.1 26.8 325 15-395 13-343 (377)
59 TIGR00895 2A0115 benzoate tran 100.0 1.6E-31 3.5E-36 251.6 21.6 356 16-398 40-397 (398)
60 PRK03633 putative MFS family t 100.0 1.5E-30 3.3E-35 242.5 26.2 336 14-419 27-364 (381)
61 TIGR00885 fucP L-fucose:H+ sym 100.0 7.5E-30 1.6E-34 238.3 29.0 331 25-415 32-400 (410)
62 KOG2504 Monocarboxylate transp 100.0 1.2E-30 2.5E-35 245.5 23.2 400 16-427 69-476 (509)
63 PRK15011 sugar efflux transpor 100.0 2E-29 4.3E-34 235.8 29.5 344 16-422 38-386 (393)
64 PRK11043 putative transporter; 100.0 9.3E-30 2E-34 239.2 27.2 325 16-401 26-357 (401)
65 cd06174 MFS The Major Facilita 100.0 1.3E-29 2.9E-34 234.4 27.2 324 15-422 21-347 (352)
66 TIGR00805 oat sodium-independe 100.0 2.5E-29 5.3E-34 245.3 30.2 354 23-402 60-582 (633)
67 TIGR00902 2A0127 phenyl propri 100.0 1.5E-29 3.2E-34 235.7 27.5 339 16-419 27-371 (382)
68 PRK10054 putative transporter; 100.0 1E-29 2.2E-34 237.3 24.9 335 16-412 30-369 (395)
69 TIGR00896 CynX cyanate transpo 100.0 7.3E-30 1.6E-34 235.9 22.9 330 12-406 19-353 (355)
70 PRK11652 emrD multidrug resist 100.0 2.7E-29 5.8E-34 235.5 27.0 318 26-401 38-360 (394)
71 PRK11010 ampG muropeptide tran 100.0 1E-28 2.3E-33 236.0 29.1 350 15-424 34-400 (491)
72 TIGR00886 2A0108 nitrite extru 100.0 4.7E-29 1E-33 231.9 25.5 325 14-385 22-364 (366)
73 KOG3764 Vesicular amine transp 100.0 9.2E-30 2E-34 219.9 18.3 344 26-427 101-454 (464)
74 PRK11128 putative 3-phenylprop 100.0 2.6E-28 5.7E-33 227.4 27.4 339 12-415 20-367 (382)
75 PF05977 MFS_3: Transmembrane 100.0 7.7E-28 1.7E-32 227.7 28.6 343 26-422 40-389 (524)
76 PRK08633 2-acyl-glycerophospho 100.0 6.6E-28 1.4E-32 256.2 31.2 329 26-400 40-383 (1146)
77 PRK06814 acylglycerophosphoeth 100.0 2.6E-28 5.6E-33 258.2 26.5 331 35-414 54-409 (1140)
78 COG0738 FucP Fucose permease [ 100.0 2.7E-27 5.8E-32 206.3 27.4 329 15-405 35-388 (422)
79 PRK09528 lacY galactoside perm 100.0 5.4E-28 1.2E-32 228.4 24.7 352 16-422 33-398 (420)
80 TIGR00889 2A0110 nucleoside tr 100.0 3.6E-27 7.8E-32 221.3 27.0 338 26-423 33-398 (418)
81 KOG0254 Predicted transporter 100.0 4.9E-28 1.1E-32 233.3 21.3 388 35-444 91-499 (513)
82 TIGR00882 2A0105 oligosacchari 100.0 3.6E-27 7.8E-32 221.1 25.5 351 16-421 25-389 (396)
83 PRK11902 ampG muropeptide tran 100.0 1.4E-26 3E-31 217.3 29.4 342 14-419 20-382 (402)
84 PF00083 Sugar_tr: Sugar (and 100.0 1.3E-32 2.8E-37 262.8 -12.3 380 35-442 48-450 (451)
85 TIGR00901 2A0125 AmpG-related 100.0 3.9E-27 8.5E-32 217.8 24.3 316 10-383 5-354 (356)
86 TIGR00792 gph sugar (Glycoside 100.0 1.3E-26 2.8E-31 220.8 28.1 333 16-403 22-382 (437)
87 TIGR00806 rfc RFC reduced fola 100.0 2.4E-27 5.1E-32 214.1 21.0 356 5-383 28-398 (511)
88 KOG0253 Synaptic vesicle trans 100.0 1.4E-26 2.9E-31 197.8 24.3 370 26-424 108-516 (528)
89 KOG0252 Inorganic phosphate tr 100.0 1.2E-27 2.6E-32 210.6 16.9 384 36-444 87-513 (538)
90 KOG2615 Permease of the major 99.9 1.5E-26 3.2E-31 198.9 17.4 341 36-413 71-426 (451)
91 TIGR00924 yjdL_sub1_fam amino 99.9 5.5E-25 1.2E-29 209.3 29.9 393 16-415 33-456 (475)
92 COG2807 CynX Cyanate permease 99.9 5.3E-25 1.2E-29 189.0 23.9 337 21-419 37-377 (395)
93 PRK10207 dipeptide/tripeptide 99.9 5.4E-25 1.2E-29 209.3 26.7 368 16-398 37-438 (489)
94 KOG0255 Synaptic vesicle trans 99.9 2.4E-25 5.3E-30 216.0 24.8 342 36-400 121-467 (521)
95 TIGR02718 sider_RhtX_FptX side 99.9 2E-24 4.4E-29 202.1 28.4 344 16-419 24-383 (390)
96 PF06609 TRI12: Fungal trichot 99.9 1.3E-23 2.9E-28 198.0 29.1 358 26-399 74-465 (599)
97 PTZ00207 hypothetical protein; 99.9 5.5E-24 1.2E-28 202.0 21.6 399 15-424 49-549 (591)
98 KOG3626 Organic anion transpor 99.9 1.6E-22 3.4E-27 191.7 28.1 358 19-402 120-650 (735)
99 PF11700 ATG22: Vacuole efflux 99.9 1.3E-21 2.8E-26 183.5 30.4 346 36-424 73-465 (477)
100 PRK09584 tppB putative tripept 99.9 8.6E-22 1.9E-26 188.5 29.5 146 16-165 44-194 (500)
101 PRK09669 putative symporter Ya 99.9 6.2E-22 1.3E-26 188.3 26.3 332 14-403 30-390 (444)
102 PF03825 Nuc_H_symport: Nucleo 99.9 1.8E-21 4E-26 179.3 25.9 341 8-403 14-366 (400)
103 PRK10429 melibiose:sodium symp 99.9 1.5E-21 3.3E-26 186.6 26.1 338 13-403 26-395 (473)
104 KOG4686 Predicted sugar transp 99.9 1.2E-22 2.6E-27 167.7 15.6 362 5-416 45-429 (459)
105 PF13347 MFS_2: MFS/sugar tran 99.9 1.1E-20 2.3E-25 178.9 28.0 332 16-403 24-386 (428)
106 TIGR01272 gluP glucose/galacto 99.9 4.1E-21 8.9E-26 172.2 23.2 274 80-410 5-298 (310)
107 PF03137 OATP: Organic Anion T 99.9 1.6E-24 3.4E-29 206.0 0.0 362 21-402 28-515 (539)
108 TIGR01301 GPH_sucrose GPH fami 99.9 5.1E-20 1.1E-24 171.6 28.6 363 17-422 28-466 (477)
109 COG2270 Permeases of the major 99.9 6.9E-21 1.5E-25 167.7 20.5 365 13-424 35-426 (438)
110 TIGR00788 fbt folate/biopterin 99.9 1.9E-21 4.2E-26 184.6 17.7 373 16-431 48-447 (468)
111 PRK09848 glucuronide transport 99.9 9.9E-20 2.1E-24 173.5 25.9 329 16-403 31-390 (448)
112 PF01306 LacY_symp: LacY proto 99.9 6.7E-20 1.5E-24 165.4 22.9 361 9-423 20-396 (412)
113 PRK11462 putative transporter; 99.9 3.5E-19 7.6E-24 169.1 28.2 329 16-403 32-389 (460)
114 PRK15462 dipeptide/tripeptide 99.9 1E-18 2.3E-23 163.6 30.1 153 14-171 30-187 (493)
115 COG2211 MelB Na+/melibiose sym 99.8 5.5E-17 1.2E-21 148.1 28.0 340 10-403 29-398 (467)
116 KOG2563 Permease of the major 99.8 1.1E-17 2.3E-22 148.5 20.2 320 36-403 82-423 (480)
117 COG3104 PTR2 Dipeptide/tripept 99.7 1.2E-14 2.5E-19 131.7 22.8 367 26-396 56-451 (498)
118 TIGR00880 2_A_01_02 Multidrug 99.7 1.1E-16 2.4E-21 126.9 7.2 137 38-174 3-140 (141)
119 KOG2816 Predicted transporter 99.7 3.7E-15 7.9E-20 138.6 17.6 318 41-403 70-394 (463)
120 PF03209 PUCC: PUCC protein; 99.7 1.6E-13 3.4E-18 122.1 26.9 314 38-402 20-364 (403)
121 KOG2325 Predicted transporter/ 99.6 1.2E-13 2.6E-18 126.7 17.0 353 26-423 64-471 (488)
122 PF01770 Folate_carrier: Reduc 99.6 1.1E-12 2.3E-17 118.3 22.5 362 4-380 5-382 (412)
123 PF03092 BT1: BT1 family; Int 99.6 5.8E-14 1.3E-18 131.7 14.5 377 19-439 15-422 (433)
124 TIGR00889 2A0110 nucleoside tr 99.5 4.2E-14 9.1E-19 133.1 11.7 140 36-175 254-405 (418)
125 PRK10642 proline/glycine betai 99.5 8.1E-14 1.8E-18 134.3 13.5 159 16-179 273-436 (490)
126 COG2271 UhpC Sugar phosphate p 99.5 9.4E-13 2E-17 116.7 14.0 174 243-424 27-203 (448)
127 PRK05122 major facilitator sup 99.5 6.7E-13 1.4E-17 124.9 12.7 135 38-172 254-389 (399)
128 TIGR01299 synapt_SV2 synaptic 99.4 2.2E-13 4.8E-18 134.3 8.8 137 38-176 600-737 (742)
129 PRK10054 putative transporter; 99.4 3.7E-12 8E-17 119.3 16.5 168 245-420 7-175 (395)
130 PRK09528 lacY galactoside perm 99.4 4.2E-13 9.1E-18 127.0 9.9 137 36-172 265-403 (420)
131 PRK11663 regulatory protein Uh 99.4 6.4E-12 1.4E-16 119.3 17.9 165 245-417 23-188 (434)
132 PRK15011 sugar efflux transpor 99.4 8.1E-13 1.8E-17 123.8 11.5 152 15-171 238-390 (393)
133 PRK10489 enterobactin exporter 99.4 1.3E-12 2.9E-17 123.5 12.6 157 16-176 246-403 (417)
134 PRK09874 drug efflux system pr 99.4 1.1E-12 2.5E-17 123.8 11.8 137 36-172 261-398 (408)
135 PRK12382 putative transporter; 99.4 1.5E-12 3.2E-17 122.3 11.2 134 38-171 254-388 (392)
136 PRK03893 putative sialic acid 99.4 2E-12 4.4E-17 125.4 11.9 143 15-161 297-442 (496)
137 cd06174 MFS The Major Facilita 99.4 1.6E-12 3.5E-17 120.1 10.7 150 16-169 198-349 (352)
138 PF05631 DUF791: Protein of un 99.4 3.4E-11 7.3E-16 105.7 16.9 232 25-306 63-304 (354)
139 TIGR00890 2A0111 Oxalate/Forma 99.4 2.9E-12 6.3E-17 119.7 10.3 137 26-164 235-374 (377)
140 TIGR00900 2A0121 H+ Antiporter 99.4 8.6E-12 1.9E-16 116.0 13.1 162 250-419 4-171 (365)
141 PRK15462 dipeptide/tripeptide 99.4 2.4E-11 5.2E-16 114.4 15.7 174 244-424 8-186 (493)
142 TIGR00924 yjdL_sub1_fam amino 99.4 1.6E-11 3.4E-16 117.4 14.7 171 245-422 10-187 (475)
143 TIGR00892 2A0113 monocarboxyla 99.3 9.1E-13 2E-17 125.6 5.8 146 16-166 264-415 (455)
144 PRK11551 putative 3-hydroxyphe 99.3 8.6E-12 1.9E-16 117.7 11.7 151 16-171 243-395 (406)
145 PF05977 MFS_3: Transmembrane 99.3 1.3E-11 2.8E-16 117.8 12.7 150 16-169 241-391 (524)
146 TIGR00899 2A0120 sugar efflux 99.3 8.3E-12 1.8E-16 116.6 11.2 149 16-169 222-371 (375)
147 TIGR00902 2A0127 phenyl propri 99.3 1.1E-11 2.3E-16 115.8 11.3 144 16-166 228-373 (382)
148 TIGR00712 glpT glycerol-3-phos 99.3 4.4E-11 9.6E-16 113.8 15.5 171 243-421 25-200 (438)
149 PRK11646 multidrug resistance 99.3 4.8E-11 1E-15 112.0 15.2 164 248-419 13-177 (400)
150 PF07690 MFS_1: Major Facilita 99.3 1.4E-11 3E-16 113.9 11.4 162 253-421 4-166 (352)
151 TIGR00893 2A0114 d-galactonate 99.3 2.1E-11 4.6E-16 114.7 12.6 152 262-421 11-163 (399)
152 PRK03633 putative MFS family t 99.3 2E-11 4.4E-16 114.0 12.2 146 16-169 223-369 (381)
153 PRK03545 putative arabinose tr 99.3 3.1E-11 6.7E-16 113.2 13.3 151 16-172 228-380 (390)
154 PRK09556 uhpT sugar phosphate 99.3 1.4E-11 2.9E-16 118.3 10.9 153 15-171 280-448 (467)
155 PF02487 CLN3: CLN3 protein; 99.3 3.8E-10 8.3E-15 102.0 19.4 322 35-394 61-390 (402)
156 TIGR00891 2A0112 putative sial 99.3 9.3E-11 2E-15 110.7 16.0 159 248-413 15-175 (405)
157 KOG3762 Predicted transporter 99.3 3.8E-11 8.3E-16 109.4 12.2 189 233-427 359-547 (618)
158 TIGR00881 2A0104 phosphoglycer 99.3 2E-11 4.3E-16 114.1 10.9 156 255-418 5-162 (379)
159 PRK09584 tppB putative tripept 99.3 1.5E-10 3.3E-15 111.3 17.1 176 241-423 16-197 (500)
160 PRK03699 putative transporter; 99.3 2.2E-10 4.7E-15 107.5 17.5 166 247-419 9-175 (394)
161 PRK10207 dipeptide/tripeptide 99.3 1.2E-10 2.6E-15 111.5 15.7 172 245-423 14-190 (489)
162 TIGR02332 HpaX 4-hydroxyphenyl 99.3 9.3E-11 2E-15 110.5 14.8 162 250-418 13-180 (412)
163 PRK10504 putative transporter; 99.3 1.3E-10 2.9E-15 111.8 16.2 168 245-420 10-178 (471)
164 COG2814 AraJ Arabinose efflux 99.3 2.2E-10 4.7E-15 103.1 15.9 176 245-430 13-189 (394)
165 PRK09705 cynX putative cyanate 99.2 7.2E-11 1.6E-15 110.6 12.6 154 16-176 228-385 (393)
166 TIGR00879 SP MFS transporter, 99.2 2.6E-11 5.6E-16 117.2 9.8 155 16-175 307-473 (481)
167 TIGR00886 2A0108 nitrite extru 99.2 2.3E-10 5.1E-15 106.4 15.8 148 246-400 2-151 (366)
168 TIGR00710 efflux_Bcr_CflA drug 99.2 1.3E-10 2.8E-15 109.0 14.1 155 259-421 19-174 (385)
169 PRK10213 nepI ribonucleoside t 99.2 3.6E-10 7.7E-15 105.9 16.2 144 265-416 40-184 (394)
170 TIGR00895 2A0115 benzoate tran 99.2 5E-11 1.1E-15 112.2 10.3 150 258-415 30-180 (398)
171 KOG3098 Uncharacterized conser 99.2 8.7E-09 1.9E-13 94.9 24.2 308 39-394 56-407 (461)
172 TIGR00897 2A0118 polyol permea 99.2 1.8E-10 3.9E-15 108.4 12.8 150 15-171 244-400 (402)
173 PRK11195 lysophospholipid tran 99.2 3.6E-10 7.9E-15 105.8 14.8 147 245-401 3-150 (393)
174 PRK10091 MFS transport protein 99.2 4.1E-10 8.9E-15 105.2 15.1 167 245-419 3-170 (382)
175 PRK11043 putative transporter; 99.2 5.6E-10 1.2E-14 105.2 16.0 155 260-421 18-175 (401)
176 PRK10473 multidrug efflux syst 99.2 4.6E-10 1E-14 105.4 15.1 160 254-421 12-172 (392)
177 PRK10077 xylE D-xylose transpo 99.2 6E-11 1.3E-15 114.6 9.1 148 26-175 301-460 (479)
178 PLN00028 nitrate transmembrane 99.2 1.3E-09 2.7E-14 104.7 17.8 151 263-421 54-213 (476)
179 TIGR00883 2A0106 metabolite-pr 99.2 6.4E-11 1.4E-15 111.3 8.7 142 16-161 242-390 (394)
180 PRK14995 methyl viologen resis 99.2 6.5E-10 1.4E-14 107.4 15.7 165 248-420 9-175 (495)
181 PRK11273 glpT sn-glycerol-3-ph 99.2 1.6E-09 3.6E-14 103.5 18.3 146 264-418 48-199 (452)
182 PRK12307 putative sialic acid 99.2 7.1E-10 1.5E-14 105.4 15.7 157 248-412 21-178 (426)
183 PRK15034 nitrate/nitrite trans 99.2 9.2E-10 2E-14 102.7 15.4 148 244-398 33-186 (462)
184 TIGR00711 efflux_EmrB drug res 99.2 4.6E-10 1E-14 108.7 13.5 164 250-421 7-171 (485)
185 PRK11102 bicyclomycin/multidru 99.1 6E-10 1.3E-14 104.1 13.4 149 263-419 9-158 (377)
186 PRK11128 putative 3-phenylprop 99.1 3.2E-10 6.9E-15 106.0 11.2 141 16-163 228-370 (382)
187 PRK11652 emrD multidrug resist 99.1 1.2E-09 2.7E-14 102.6 15.1 152 258-417 21-173 (394)
188 PF06963 FPN1: Ferroportin1 (F 99.1 2E-08 4.3E-13 92.8 22.0 326 36-385 41-403 (432)
189 PRK09952 shikimate transporter 99.1 6.6E-10 1.4E-14 105.6 12.7 152 16-171 273-432 (438)
190 TIGR00903 2A0129 major facilit 99.1 1.2E-09 2.6E-14 100.8 13.8 152 261-421 7-159 (368)
191 TIGR00806 rfc RFC reduced fola 99.1 5.1E-09 1.1E-13 96.2 17.0 131 268-407 48-180 (511)
192 TIGR00885 fucP L-fucose:H+ sym 99.1 3.9E-09 8.4E-14 99.2 16.4 145 248-399 6-154 (410)
193 PRK15402 multidrug efflux syst 99.1 2.4E-09 5.3E-14 101.0 15.0 147 266-420 34-181 (406)
194 KOG1330 Sugar transporter/spin 99.1 2.6E-10 5.7E-15 102.5 7.1 154 273-432 60-214 (493)
195 TIGR00882 2A0105 oligosacchari 99.1 7.4E-10 1.6E-14 104.1 10.6 135 36-170 257-393 (396)
196 TIGR00887 2A0109 phosphate:H+ 99.0 6.5E-09 1.4E-13 100.8 16.3 110 284-399 60-175 (502)
197 PRK11010 ampG muropeptide tran 99.0 1.9E-09 4.1E-14 103.8 12.4 144 26-171 253-402 (491)
198 PRK15075 citrate-proton sympor 99.0 1.3E-09 2.9E-14 103.6 11.2 132 16-151 261-398 (434)
199 PRK15403 multidrug efflux syst 99.0 7.1E-09 1.5E-13 97.8 15.8 142 272-420 42-184 (413)
200 PF11700 ATG22: Vacuole efflux 99.0 2.4E-09 5.1E-14 101.3 12.5 143 26-170 312-466 (477)
201 TIGR00898 2A0119 cation transp 99.0 2E-09 4.4E-14 104.7 11.9 136 38-176 360-498 (505)
202 KOG2615 Permease of the major 99.0 2.5E-09 5.4E-14 93.7 10.7 140 284-431 72-215 (451)
203 PF01306 LacY_symp: LacY proto 99.0 1.8E-09 3.8E-14 98.4 10.3 141 35-175 261-403 (412)
204 TIGR00769 AAA ADP/ATP carrier 99.0 1.5E-06 3.2E-11 81.5 29.0 238 35-310 45-333 (472)
205 TIGR00894 2A0114euk Na(+)-depe 99.0 3E-09 6.6E-14 102.2 11.4 140 276-421 71-213 (465)
206 PRK08633 2-acyl-glycerophospho 99.0 3.5E-09 7.6E-14 113.6 11.8 149 16-168 255-406 (1146)
207 KOG3810 Micronutrient transpor 99.0 4.6E-09 9.9E-14 90.6 9.8 349 2-380 3-368 (433)
208 TIGR02718 sider_RhtX_FptX side 99.0 4.3E-09 9.3E-14 98.7 10.8 146 16-166 231-385 (390)
209 COG2223 NarK Nitrate/nitrite t 98.9 2.3E-08 4.9E-13 89.4 14.1 170 245-423 14-189 (417)
210 TIGR00880 2_A_01_02 Multidrug 98.9 6E-09 1.3E-13 82.1 9.4 125 288-419 6-130 (141)
211 TIGR00792 gph sugar (Glycoside 98.9 2.3E-09 5E-14 102.3 8.3 115 36-150 260-383 (437)
212 TIGR01272 gluP glucose/galacto 98.9 6.8E-09 1.5E-13 93.4 10.5 139 16-159 163-302 (310)
213 PRK11902 ampG muropeptide tran 98.9 2.7E-08 5.7E-13 93.8 14.9 158 254-418 8-173 (402)
214 PF06609 TRI12: Fungal trichot 98.9 2.9E-08 6.4E-13 94.9 15.0 153 266-427 65-217 (599)
215 PRK10133 L-fucose transporter; 98.9 4.9E-08 1.1E-12 92.6 16.5 145 248-399 29-177 (438)
216 PRK06814 acylglycerophosphoeth 98.9 6.7E-09 1.5E-13 111.1 11.0 149 16-168 248-418 (1140)
217 PF03825 Nuc_H_symport: Nucleo 98.9 1.7E-08 3.7E-13 93.6 11.8 153 16-173 230-396 (400)
218 PRK10406 alpha-ketoglutarate t 98.9 2E-08 4.3E-13 95.5 12.3 150 16-170 266-422 (432)
219 PTZ00207 hypothetical protein; 98.9 6.1E-08 1.3E-12 93.3 15.4 152 261-424 43-202 (591)
220 PF06813 Nodulin-like: Nodulin 98.9 3.3E-08 7.2E-13 84.2 11.4 143 26-172 32-182 (250)
221 TIGR00805 oat sodium-independe 98.8 2.1E-08 4.5E-13 99.0 11.2 126 271-402 58-235 (633)
222 TIGR01301 GPH_sucrose GPH fami 98.8 1.2E-07 2.6E-12 89.3 15.3 142 250-398 9-175 (477)
223 COG2270 Permeases of the major 98.8 1.1E-08 2.4E-13 91.4 7.3 133 26-160 283-417 (438)
224 KOG3764 Vesicular amine transp 98.8 2.9E-08 6.3E-13 87.7 9.5 134 284-424 110-244 (464)
225 TIGR00896 CynX cyanate transpo 98.8 1.1E-07 2.3E-12 88.1 13.9 141 266-415 21-163 (355)
226 KOG2504 Monocarboxylate transp 98.8 1.5E-08 3.2E-13 96.6 8.2 151 16-171 321-475 (509)
227 KOG3762 Predicted transporter 98.8 2.1E-08 4.5E-13 92.0 8.6 144 26-171 401-546 (618)
228 COG3104 PTR2 Dipeptide/tripept 98.8 4.2E-08 9.1E-13 89.8 10.0 180 241-427 16-206 (498)
229 KOG0637 Sucrose transporter an 98.8 2.5E-07 5.5E-12 83.4 14.2 118 26-145 62-203 (498)
230 KOG4332 Predicted sugar transp 98.8 5.2E-08 1.1E-12 81.2 9.2 305 26-385 67-391 (454)
231 TIGR00901 2A0125 AmpG-related 98.7 1.1E-07 2.3E-12 88.2 11.8 148 264-418 7-169 (356)
232 PRK09848 glucuronide transport 98.7 2.2E-08 4.7E-13 95.8 6.6 112 38-149 269-390 (448)
233 KOG2532 Permease of the major 98.7 2.2E-07 4.7E-12 87.6 12.7 145 275-425 67-214 (466)
234 KOG4686 Predicted sugar transp 98.7 2.1E-07 4.6E-12 78.4 11.1 135 17-157 288-427 (459)
235 KOG0569 Permease of the major 98.7 1.5E-07 3.2E-12 87.8 11.3 149 27-178 301-460 (485)
236 TIGR00788 fbt folate/biopterin 98.7 7.1E-08 1.5E-12 92.2 9.5 124 24-149 281-415 (468)
237 COG0477 ProP Permeases of the 98.7 1E-07 2.2E-12 86.5 10.1 129 35-163 41-176 (338)
238 TIGR00926 2A1704 Peptide:H+ sy 98.6 6.1E-06 1.3E-10 81.2 20.1 144 26-171 18-181 (654)
239 KOG0253 Synaptic vesicle trans 98.6 1E-07 2.2E-12 83.3 6.6 124 43-172 391-519 (528)
240 PRK09669 putative symporter Ya 98.6 1.2E-06 2.7E-11 83.6 14.7 147 255-402 19-173 (444)
241 COG0738 FucP Fucose permease [ 98.6 2.8E-06 6.1E-11 75.8 15.5 129 266-401 34-166 (422)
242 COG2807 CynX Cyanate permease 98.6 7.6E-07 1.6E-11 78.2 11.4 165 2-172 210-385 (395)
243 KOG0255 Synaptic vesicle trans 98.6 3.5E-07 7.6E-12 89.3 10.3 129 284-422 122-250 (521)
244 PRK11462 putative transporter; 98.6 2E-06 4.4E-11 82.2 15.2 150 253-403 17-174 (460)
245 PF13000 Acatn: Acetyl-coenzym 98.5 3.7E-05 8.1E-10 70.8 21.7 365 16-402 23-468 (544)
246 PRK10429 melibiose:sodium symp 98.5 2.6E-06 5.7E-11 81.9 14.8 148 252-400 13-168 (473)
247 COG2211 MelB Na+/melibiose sym 98.5 6.5E-06 1.4E-10 76.3 15.4 153 250-403 17-177 (467)
248 PF13347 MFS_2: MFS/sugar tran 98.5 1.3E-06 2.8E-11 83.1 11.3 148 255-403 11-168 (428)
249 KOG2533 Permease of the major 98.5 1.4E-06 3E-11 82.5 11.0 134 284-423 85-223 (495)
250 KOG3574 Acetyl-CoA transporter 98.4 1.8E-05 3.9E-10 69.9 16.1 337 15-402 52-432 (510)
251 KOG0254 Predicted transporter 98.3 4.7E-06 1E-10 81.1 11.7 128 284-418 93-221 (513)
252 PF00083 Sugar_tr: Sugar (and 98.3 3.8E-08 8.3E-13 94.3 -3.9 126 284-416 50-181 (451)
253 PF03219 TLC: TLC ATP/ADP tran 98.3 0.0015 3.2E-08 62.1 26.4 230 45-310 71-349 (491)
254 TIGR00939 2a57 Equilibrative N 98.2 7E-05 1.5E-09 70.4 16.9 98 38-140 50-156 (437)
255 PF03209 PUCC: PUCC protein; 98.2 2.9E-05 6.2E-10 70.1 13.2 163 3-167 213-393 (403)
256 KOG0252 Inorganic phosphate tr 98.2 3.1E-06 6.7E-11 76.6 5.6 133 44-177 359-502 (538)
257 PF05978 UNC-93: Ion channel r 98.1 1.3E-05 2.9E-10 63.0 8.4 101 43-144 47-148 (156)
258 PF06813 Nodulin-like: Nodulin 98.1 2.4E-05 5.3E-10 66.9 10.1 132 260-400 17-156 (250)
259 KOG3880 Predicted small molecu 98.0 4.1E-05 8.8E-10 65.6 9.6 134 36-174 65-201 (409)
260 PF06779 DUF1228: Protein of u 98.0 1.6E-05 3.5E-10 54.6 5.1 75 10-89 9-84 (85)
261 KOG1237 H+/oligopeptide sympor 97.9 0.0017 3.6E-08 63.1 18.5 132 38-169 78-242 (571)
262 COG3202 ATP/ADP translocase [E 97.8 0.03 6.4E-07 52.2 26.5 238 36-310 64-352 (509)
263 PF00854 PTR2: POT family; In 97.8 5.4E-05 1.2E-09 70.4 6.8 108 63-170 2-121 (372)
264 TIGR00926 2A1704 Peptide:H+ sy 97.8 0.00044 9.5E-09 68.4 13.1 158 262-425 4-180 (654)
265 KOG2816 Predicted transporter 97.7 0.00077 1.7E-08 63.6 13.6 118 290-417 72-189 (463)
266 KOG2325 Predicted transporter/ 97.6 0.00034 7.3E-09 65.4 9.7 134 285-424 76-226 (488)
267 PF05631 DUF791: Protein of un 97.6 0.0014 3.1E-08 58.4 13.2 143 274-422 62-211 (354)
268 PF12832 MFS_1_like: MFS_1 lik 97.6 0.00013 2.7E-09 49.8 4.4 67 4-72 8-75 (77)
269 PF07672 MFS_Mycoplasma: Mycop 97.4 0.0038 8.1E-08 52.9 11.6 55 117-171 2-61 (267)
270 KOG2563 Permease of the major 97.3 0.0018 3.9E-08 59.2 9.8 150 245-401 41-202 (480)
271 PF12832 MFS_1_like: MFS_1 lik 97.3 0.0022 4.7E-08 43.8 7.7 58 252-310 7-65 (77)
272 PF01770 Folate_carrier: Reduc 97.2 0.0093 2E-07 54.9 13.5 152 266-424 24-179 (412)
273 PF06963 FPN1: Ferroportin1 (F 97.2 0.059 1.3E-06 50.5 18.9 173 247-421 4-194 (432)
274 PF03092 BT1: BT1 family; Int 97.2 0.0027 6E-08 60.1 10.3 147 270-419 14-167 (433)
275 PF03137 OATP: Organic Anion T 96.9 0.00013 2.9E-09 70.5 -1.4 124 270-399 27-201 (539)
276 PF05978 UNC-93: Ion channel r 96.8 0.037 8.1E-07 43.7 11.7 101 287-394 44-144 (156)
277 PF01733 Nucleoside_tran: Nucl 96.5 0.00052 1.1E-08 61.8 -0.9 101 287-392 189-301 (309)
278 KOG0637 Sucrose transporter an 96.1 0.046 1E-06 50.4 9.6 146 249-396 36-200 (498)
279 TIGR00769 AAA ADP/ATP carrier 96.0 0.28 6.1E-06 46.7 14.5 41 358-399 149-189 (472)
280 COG0477 ProP Permeases of the 95.9 0.2 4.4E-06 44.7 13.3 113 284-401 43-158 (338)
281 KOG1479 Nucleoside transporter 95.9 0.27 5.9E-06 45.1 13.3 104 289-398 292-401 (406)
282 KOG3626 Organic anion transpor 95.7 0.063 1.4E-06 53.1 9.2 64 263-331 114-178 (735)
283 PRK03612 spermidine synthase; 95.6 0.51 1.1E-05 45.9 14.8 61 345-407 117-178 (521)
284 PF02487 CLN3: CLN3 protein; 95.6 0.029 6.3E-07 51.7 6.0 109 36-145 284-395 (402)
285 PRK03612 spermidine synthase; 95.1 0.23 5E-06 48.3 10.8 136 26-165 45-190 (521)
286 KOG2601 Iron transporter [Inor 94.5 0.11 2.3E-06 46.7 6.2 126 38-163 68-217 (503)
287 PF06779 DUF1228: Protein of u 94.5 0.36 7.9E-06 33.4 7.5 75 260-340 7-82 (85)
288 PF00854 PTR2: POT family; In 94.0 0.11 2.4E-06 48.3 5.8 86 339-426 34-122 (372)
289 KOG1479 Nucleoside transporter 93.7 1.4 3.1E-05 40.6 11.9 34 339-373 118-151 (406)
290 PF03219 TLC: TLC ATP/ADP tran 92.7 4 8.8E-05 39.3 13.9 40 360-400 166-205 (491)
291 PF13000 Acatn: Acetyl-coenzym 91.4 0.99 2.1E-05 42.7 7.9 36 359-395 139-174 (544)
292 KOG3097 Predicted membrane pro 89.8 14 0.00029 33.3 12.8 91 50-141 75-177 (390)
293 KOG4332 Predicted sugar transp 89.5 2.3 5E-05 36.7 7.8 138 30-167 279-426 (454)
294 KOG3098 Uncharacterized conser 89.3 9.1 0.0002 36.4 12.4 99 287-392 57-155 (461)
295 KOG3574 Acetyl-CoA transporter 88.9 4.2 9E-05 37.3 9.3 63 245-311 31-99 (510)
296 TIGR00939 2a57 Equilibrative N 88.4 3.2 7E-05 39.5 9.0 108 37-144 311-431 (437)
297 KOG1237 H+/oligopeptide sympor 84.9 17 0.00036 36.1 12.0 165 255-425 47-243 (571)
298 COG5336 Uncharacterized protei 81.8 5.8 0.00013 28.5 5.4 34 370-404 38-71 (116)
299 KOG3880 Predicted small molecu 79.6 4 8.7E-05 36.1 4.9 109 36-144 291-401 (409)
300 PF02990 EMP70: Endomembrane p 79.3 29 0.00062 34.1 11.3 23 288-310 305-327 (521)
301 PF06912 DUF1275: Protein of u 78.3 14 0.0003 31.1 7.9 43 112-154 153-195 (209)
302 PF03547 Mem_trans: Membrane t 76.2 9.7 0.00021 35.7 7.1 18 291-308 6-23 (385)
303 COG2962 RarD Predicted permeas 72.7 52 0.0011 28.9 9.7 81 235-327 59-139 (293)
304 PF01733 Nucleoside_tran: Nucl 70.8 1.1 2.4E-05 40.4 -0.5 106 38-143 187-306 (309)
305 KOG3810 Micronutrient transpor 68.7 11 0.00024 34.2 5.0 95 35-129 273-370 (433)
306 PF07672 MFS_Mycoplasma: Mycop 68.5 34 0.00075 29.7 7.8 70 36-105 144-224 (267)
307 PRK13629 threonine/serine tran 68.4 1.1E+02 0.0024 29.1 15.3 50 114-168 17-66 (443)
308 PF03606 DcuC: C4-dicarboxylat 68.3 1.2E+02 0.0026 29.4 13.5 15 387-401 174-188 (465)
309 PF07857 DUF1632: CEO family ( 68.0 76 0.0016 27.6 9.8 21 256-276 189-209 (254)
310 KOG2881 Predicted membrane pro 62.1 95 0.0021 26.8 8.9 20 291-310 251-270 (294)
311 PF00909 Ammonium_transp: Ammo 61.7 1.5E+02 0.0032 28.1 13.1 34 117-150 107-140 (399)
312 KOG2601 Iron transporter [Inor 57.7 1.6E+02 0.0036 27.4 11.6 19 385-403 185-203 (503)
313 PF06679 DUF1180: Protein of u 56.5 25 0.00054 28.0 4.5 9 407-415 96-104 (163)
314 COG5336 Uncharacterized protei 53.0 43 0.00093 24.3 4.7 20 291-310 53-72 (116)
315 KOG4830 Predicted sugar transp 52.4 2.1 4.5E-05 36.7 -2.0 61 238-298 194-255 (412)
316 TIGR03644 marine_trans_1 proba 51.5 2.2E+02 0.0047 26.9 12.1 12 138-149 115-126 (404)
317 PF13386 DsbD_2: Cytochrome C 50.6 1.5E+02 0.0032 24.7 11.6 29 282-310 152-180 (199)
318 PRK11588 hypothetical protein; 50.6 2.5E+02 0.0054 27.4 12.0 20 152-171 17-36 (506)
319 PF03547 Mem_trans: Membrane t 49.3 2.3E+02 0.0049 26.5 16.4 23 235-257 235-257 (385)
320 PF11947 DUF3464: Protein of u 49.2 43 0.00092 26.3 4.7 31 355-385 111-141 (153)
321 KOG1277 Endosomal membrane pro 46.1 2.7E+02 0.0059 26.5 11.4 9 362-370 436-444 (593)
322 COG4769 Predicted membrane pro 45.5 19 0.0004 28.4 2.2 51 41-97 81-132 (181)
323 PF15048 OSTbeta: Organic solu 43.8 54 0.0012 24.5 4.3 20 404-423 34-53 (125)
324 PLN02332 membrane bound O-acyl 40.6 2.1E+02 0.0046 27.7 9.0 46 48-93 323-372 (465)
325 PF10183 ESSS: ESSS subunit of 40.3 36 0.00078 24.9 3.0 32 144-175 53-84 (105)
326 PRK10263 DNA translocase FtsK; 40.2 5.7E+02 0.012 28.5 14.0 21 289-309 61-81 (1355)
327 KOG4112 Signal peptidase subun 38.9 35 0.00077 23.8 2.5 16 387-403 35-50 (101)
328 PF07857 DUF1632: CEO family ( 37.5 48 0.001 28.8 3.8 9 394-402 94-102 (254)
329 TIGR02230 ATPase_gene1 F0F1-AT 35.6 1.7E+02 0.0036 21.2 5.6 38 123-160 45-86 (100)
330 PTZ00370 STEVOR; Provisional 35.2 2.6E+02 0.0057 24.7 7.7 34 390-424 243-276 (296)
331 PF03741 TerC: Integral membra 33.8 2.7E+02 0.0058 22.9 11.7 56 102-159 13-68 (183)
332 PF06645 SPC12: Microsomal sig 33.5 1.5E+02 0.0032 20.1 4.9 53 121-179 8-60 (76)
333 KOG3097 Predicted membrane pro 33.3 3.9E+02 0.0084 24.6 8.7 71 290-366 68-138 (390)
334 PRK10263 DNA translocase FtsK; 31.5 2.6E+02 0.0056 31.0 8.4 25 131-155 141-165 (1355)
335 COG5249 RER1 Golgi protein inv 31.3 2.5E+02 0.0053 21.7 7.5 14 148-161 55-68 (180)
336 PRK00293 dipZ thiol:disulfide 29.6 5.9E+02 0.013 25.5 16.5 23 128-150 213-235 (571)
337 TIGR02230 ATPase_gene1 F0F1-AT 29.4 1.4E+02 0.003 21.6 4.4 37 38-75 48-86 (100)
338 COG3619 Predicted membrane pro 29.0 3.7E+02 0.008 23.0 9.3 40 110-149 156-196 (226)
339 COG3202 ATP/ADP translocase [E 28.8 5.6E+02 0.012 25.0 19.5 71 348-419 294-365 (509)
340 PRK10712 PTS system fructose-s 28.7 6E+02 0.013 25.4 11.6 20 290-309 316-335 (563)
341 PF11511 RhodobacterPufX: Intr 28.7 1.7E+02 0.0038 19.1 4.6 31 149-179 29-59 (67)
342 PRK13712 conjugal transfer pro 28.5 59 0.0013 22.5 2.3 65 47-113 15-82 (115)
343 PF05255 UPF0220: Uncharacteri 28.2 3.2E+02 0.0069 22.0 8.1 59 112-170 13-77 (166)
344 COG1268 BioY Uncharacterized c 28.1 1.2E+02 0.0026 24.9 4.4 24 38-61 87-111 (184)
345 PF01864 DUF46: Putative integ 27.6 2E+02 0.0042 23.4 5.5 29 285-313 90-118 (175)
346 PF07760 DUF1616: Protein of u 27.3 2.9E+02 0.0063 24.6 7.2 57 88-145 22-78 (287)
347 PF02694 UPF0060: Uncharacteri 27.2 1.4E+02 0.0029 21.8 4.0 45 38-82 59-104 (107)
348 KOG1278 Endosomal membrane pro 27.2 52 0.0011 31.8 2.5 36 272-307 350-386 (628)
349 COG0814 SdaC Amino acid permea 26.8 5.6E+02 0.012 24.4 13.6 26 116-141 9-34 (415)
350 TIGR00836 amt ammonium transpo 25.8 5.8E+02 0.013 24.2 9.6 16 135-150 105-120 (403)
351 PF12805 FUSC-like: FUSC-like 25.7 2.2E+02 0.0048 25.3 6.2 36 65-100 2-38 (284)
352 PF13268 DUF4059: Protein of u 25.5 1.9E+02 0.0042 19.2 4.1 24 415-438 19-42 (72)
353 PF02632 BioY: BioY family; I 24.6 1.7E+02 0.0036 23.1 4.6 26 38-63 58-84 (148)
354 COG1288 Predicted membrane pro 24.5 2.1E+02 0.0045 27.1 5.7 21 151-171 13-33 (481)
355 COG2056 Predicted permease [Ge 24.1 4.2E+02 0.0092 24.5 7.3 18 407-424 192-209 (444)
356 PF04226 Transgly_assoc: Trans 23.2 1.8E+02 0.004 17.5 4.1 37 133-169 7-43 (48)
357 PF11151 DUF2929: Protein of u 22.9 2.1E+02 0.0046 18.1 4.9 40 130-169 11-50 (57)
358 COG2836 Uncharacterized conser 22.7 4.8E+02 0.011 22.2 11.5 27 283-309 167-193 (232)
359 TIGR02865 spore_II_E stage II 22.0 2.4E+02 0.0051 29.5 6.3 44 87-131 185-228 (764)
360 COG4262 Predicted spermidine s 22.0 6.5E+02 0.014 23.4 12.4 135 34-171 44-190 (508)
361 PRK10720 uracil transporter; P 21.9 4.2E+02 0.009 25.4 7.5 20 58-77 298-317 (428)
362 PF11947 DUF3464: Protein of u 21.0 1.9E+02 0.004 22.9 4.1 51 83-136 95-145 (153)
363 PF07456 Hpre_diP_synt_I: Hept 20.8 1.9E+02 0.004 22.8 4.1 51 39-95 67-118 (148)
364 PF11299 DUF3100: Protein of u 20.5 29 0.00062 29.3 -0.4 53 91-144 177-229 (241)
No 1
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-39 Score=284.40 Aligned_cols=374 Identities=16% Similarity=0.136 Sum_probs=295.5
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRML 94 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 94 (462)
.|.++++ .++|.+|+|. +.+.+.+++-++-.+.|.+ ||.+.|+.+..++++.++.+++++++++.+.+.+.-++
T Consensus 52 ~p~l~e~---~~lsk~~lG~--i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~l 126 (448)
T COG2271 52 MPALIED---GGLSKTQLGI--LGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVL 126 (448)
T ss_pred cHHHHHh---cCCCHHHHHH--HHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 6756555 6799999777 9999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHH--HHhhcccchHHHHHHHHHHHHHHHHHHhhcc
Q 012500 95 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG--GVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 172 (462)
Q Consensus 95 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~--~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 172 (462)
+|..+|..+|++...+..|+|++|||+..++++.+-++|..+.|++. +.+..+.+||..|++.++++++.+++.++..
T Consensus 127 ng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~ 206 (448)
T COG2271 127 NGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLL 206 (448)
T ss_pred HHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999 8999889999999999999999999999988
Q ss_pred ccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHH
Q 012500 173 PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL 252 (462)
Q Consensus 173 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (462)
+++|+....++-++...+ ..+...++++++. ......-.+.+++||.+|.+.+
T Consensus 207 rd~Pqs~GLP~ie~~~~d------------------~~e~~~~~~~~~~---------ls~~~i~~~YVL~Nk~iW~la~ 259 (448)
T COG2271 207 RDRPQSEGLPPIEEYRGD------------------PLEIYEEEKENEG---------LTAWQIFVKYVLKNKLIWLLAL 259 (448)
T ss_pred CCCccccCCCCHHHhhcC------------------chhhhhhhccCCC---------ccHHHHHHHHHHcChHHHHHHH
Confidence 777665443333222100 0000000000000 0000113567899999999999
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHH-HHHHHHHHHHHH
Q 012500 253 GYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLL-SAATFLGAISCL 330 (462)
Q Consensus 253 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ 330 (462)
+..+.+..-+++..|.|.|+.+..|.+.... ...+++-.++++|++++||++||+-+.++ ... ++..+....+..
T Consensus 260 a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR---~p~~~i~~~~i~~~~~ 336 (448)
T COG2271 260 ANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRR---GPMALIFMLLITASLV 336 (448)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccccc---chHHHHHHHHHHHHHH
Confidence 9999999999999999999999999997666 44488899999999999999999743211 333 333333333333
Q ss_pred HHHHhh--hhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHH
Q 012500 331 TAFCLS--SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKT 408 (462)
Q Consensus 331 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~ 408 (462)
.....+ +.+...++++..|+...+.+..+-....|..|++..|++.|+...+....|.+.+....|++.|.+| |...
T Consensus 337 ~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~g-W~g~ 415 (448)
T COG2271 337 LYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWG-WDGG 415 (448)
T ss_pred HHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCC-Ccch
Confidence 333333 3466677777778887777666666777888889999999999877777799999999999999865 8788
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012500 409 TLALTSIFFLAAGIWFV 425 (462)
Q Consensus 409 ~~~~~~~~~~~~~~~~~ 425 (462)
|++..+..+++.++++.
T Consensus 416 Fi~~~~~a~l~~lll~~ 432 (448)
T COG2271 416 FIVLSIAALLAILLLLP 432 (448)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88777776666655543
No 2
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.2e-38 Score=279.98 Aligned_cols=346 Identities=18% Similarity=0.192 Sum_probs=281.4
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRML 94 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 94 (462)
+|.+.++ ++.|..+.|. ..+.|.++..+++|+...+ ||+.||++++..+.++.++++++++++||+.++++|++
T Consensus 36 Lp~iA~d---l~vs~~~aG~--lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~ 110 (394)
T COG2814 36 LPPIAAD---LGVSEGAAGQ--LITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARAL 110 (394)
T ss_pred hHHHHHH---cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 6655555 8999999777 9999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhcccc
Q 012500 95 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 174 (462)
Q Consensus 95 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 174 (462)
.|+..|.+++...++..+..|++||++++++...+..++.++|.+++.++.+.+|||++|++.+.++++..+..+..+|
T Consensus 111 ~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP- 189 (394)
T COG2814 111 AGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP- 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred ccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHH
Q 012500 175 QLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGY 254 (462)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (462)
+++. +++++.. .++..+++|+|.++...+..
T Consensus 190 -~~~~--~~~~~~~----------------------------------------------~~~~~~~l~~p~v~~~l~~t 220 (394)
T COG2814 190 -PSEI--SGSLPGP----------------------------------------------LRTLLRLLRRPGVLLGLLAT 220 (394)
T ss_pred -CccC--CCCCCcc----------------------------------------------hhHHHHHhcCchHHHHHHHH
Confidence 1111 1111100 12344788999999999999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHH-HHH
Q 012500 255 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC-LTA 332 (462)
Q Consensus 255 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 332 (462)
++.....+...+|+..++++..|.++... .....++++.++|+.++|++.|| +.+ +.+.....+..... .+.
T Consensus 221 ~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~-----~~l~~~~~l~a~~~l~l~ 294 (394)
T COG2814 221 FLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPR-----RALIAALLLLALALLALT 294 (394)
T ss_pred HHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cch-----hHHHHHHHHHHHHHHHHH
Confidence 99989988999999999999999987666 45578899999999999999999 665 55555544444443 344
Q ss_pred HHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHH
Q 012500 333 FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLAL 412 (462)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~ 412 (462)
...++.+...+...+.++..............+ .-|+.+..+.+++....|. |..+|..++|.+.|+.| +....+..
T Consensus 295 ~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nl-gia~GA~lGG~v~~~~g-~~~~~~~~ 371 (394)
T COG2814 295 FTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNL-GIALGAALGGLVLDALG-YAATGWVG 371 (394)
T ss_pred HhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhc-hHHHHHHH
Confidence 444455555555555555555444444444444 4467899999999888887 99999999999999965 76777777
Q ss_pred HHHHHHHHHHHHH
Q 012500 413 TSIFFLAAGIWFV 425 (462)
Q Consensus 413 ~~~~~~~~~~~~~ 425 (462)
+...+.+..+.+.
T Consensus 372 a~l~~~a~~~~~~ 384 (394)
T COG2814 372 AALLLLALLLALL 384 (394)
T ss_pred HHHHHHHHHHHHH
Confidence 6666665555543
No 3
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=2.7e-36 Score=282.25 Aligned_cols=336 Identities=15% Similarity=0.092 Sum_probs=256.3
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccc
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS 104 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 104 (462)
++.++.+.++ ..+.+.+++.+++++.|++ ||+|||+++..+.++.+++++.+++++|++.+++.|+++|++.+...+
T Consensus 39 ~~~s~~~~g~--~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~ 116 (390)
T PRK03545 39 FHMQTAQVGL--MLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWS 116 (390)
T ss_pred cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 7888888665 9999999999999999999 999999999999999999999999999999999999999999998899
Q ss_pred cccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCccc
Q 012500 105 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAES 184 (462)
Q Consensus 105 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 184 (462)
...+++.|++|+++|++++++...+.++|.+++|++++.+.+++|||+.|++.++++++..+..+...|+.+++ +
T Consensus 117 ~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~-----~ 191 (390)
T PRK03545 117 ITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSE-----H 191 (390)
T ss_pred HHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCC-----C
Confidence 99999999999999999999999999999999999999999999999999999988877766655555542110 0
Q ss_pred cccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHH
Q 012500 185 GKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAY 264 (462)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (462)
+.. .++.++.+|+|.++......++........
T Consensus 192 -~~~----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (390)
T PRK03545 192 -SGS----------------------------------------------LKSLPLLFRRPALVSLYLLTVVVVTAHFTA 224 (390)
T ss_pred -cch----------------------------------------------HHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 000 113456778888776665555555555555
Q ss_pred HHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 012500 265 SYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLA 343 (462)
Q Consensus 265 ~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (462)
..+.|.++++..|.++... .......+++++++++.+++.||+++| ...............+....++.+..+.
T Consensus 225 ~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 299 (390)
T PRK03545 225 YSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSG-----FLLIAIALLLVCLLLLLPAANSEWHLSV 299 (390)
T ss_pred HHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchh-----HHHHHHHHHHHHHHHHHHHhchHHHHHH
Confidence 6778888888778776555 444667788899999999999999876 5444333333333333333444555555
Q ss_pred HHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHHHHHHHHH
Q 012500 344 LFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 423 (462)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 423 (462)
...+.+++.....+.......+.. |+.++++.|+.+...+. |..+||.+.|.+.|+.| ++..+...+.+.+++.+..
T Consensus 300 ~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~-g~~~G~~~~G~~~~~~g-~~~~~~~~~~~~~~~~~~~ 376 (390)
T PRK03545 300 LSIFWGIAIMCIGLAMQVKVLKLA-PDATDVAMALFSGIFNI-GIGAGALLGNQVSLHLG-LSSIGYVGAALALAALVWS 376 (390)
T ss_pred HHHHHHHHHhcchHHHHHHHHHhC-CCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccC-hhHHHHHHHHHHHHHHHHH
Confidence 555666665444444445555554 56889999998666555 88999999999999877 6666766666655544443
No 4
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=2.6e-36 Score=285.55 Aligned_cols=375 Identities=14% Similarity=0.122 Sum_probs=260.0
Q ss_pred HHHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHH
Q 012500 13 GLILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAIC 91 (462)
Q Consensus 13 ~~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 91 (462)
+..+|.+.++ ++.+..+.+. +.+.+.+++.+++++.|++ ||+|||+++..+.++.+++.+++++++|++.+++.
T Consensus 43 ~~~~~~~~~~---~g~s~~~~g~--~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 117 (434)
T PRK11663 43 NAAMPEMLAD---LGLSRSDIGL--LATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALL 117 (434)
T ss_pred HHhhHHHHHh---cCCCHHHHHH--HHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 3446755554 7888888655 9999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhc
Q 012500 92 RMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 171 (462)
Q Consensus 92 r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 171 (462)
|++.|++.|...+...+++.|++|+++|++++++.+.+.++|..+++.+++.+.+++|||+.|++.+++.++..+..++.
T Consensus 118 ~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~ 197 (434)
T PRK11663 118 WVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWR 197 (434)
T ss_pred HHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998999999999999999999999999999999999999999999999999999999988777666555555
Q ss_pred cccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhH-HHHhhhhHHHHH
Q 012500 172 KPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDT-KVLLQEKVYVVN 250 (462)
Q Consensus 172 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 250 (462)
.||++++...++..++..+ . + +.+++.+ ++. ...+ +.+ +..++++.++..
T Consensus 198 ~~~~p~~~~~~~~~~~~~~-----------~-----~--~~~~~~~-~~~-------~~~~---~~~~~~~~~~~~~~~~ 248 (434)
T PRK11663 198 LRDKPQAMGLPSVGEWRHD-----------A-----L--ELAQQQE-GAG-------LSRK---EILTKYVLLNPYIWLL 248 (434)
T ss_pred cCCCHhhcCCCCccccccc-----------c-----c--ccchhcc-ccC-------CChh---hhHHHHHhcChHHHHH
Confidence 5665433211111110000 0 0 0000000 000 0000 111 135678888888
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHH
Q 012500 251 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC 329 (462)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 329 (462)
.+..++.......+..|+|.|+.+.+|.+.... ...+...++.++++++.|++.||+.++.++................
T Consensus 249 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~ 328 (434)
T PRK11663 249 SFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGS 328 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHH
Confidence 777777777777888899999988788886555 4456778889999999999999994332111111111111111111
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHH
Q 012500 330 LTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTT 409 (462)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~ 409 (462)
+......+...........+++.............+..|++.|+++.|+.+...+. |.+++|.+.|++.|..| +...+
T Consensus 329 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~~p~~~g~l~~~~g-~~~~f 406 (434)
T PRK11663 329 LWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYL-GAALSGYPLAKVLEIWH-WTGFF 406 (434)
T ss_pred HHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHH-HHHHhcccHHHHHHhcc-cHHHH
Confidence 11111222222222222223222211112233456667788999999999866666 99999999999999887 77777
Q ss_pred HHHHHHHHHHHHHH
Q 012500 410 LALTSIFFLAAGIW 423 (462)
Q Consensus 410 ~~~~~~~~~~~~~~ 423 (462)
...+.+.+++.+..
T Consensus 407 ~~~~~~~~~~~~~~ 420 (434)
T PRK11663 407 VVISIAAGISALLL 420 (434)
T ss_pred HHHHHHHHHHHHHH
Confidence 77776655554433
No 5
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=2e-36 Score=289.16 Aligned_cols=370 Identities=16% Similarity=0.109 Sum_probs=261.0
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhc-----cchhHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGS-----SFDFWSIA 89 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~l~ 89 (462)
.|.+.++ ++.+..+.++ +.+.+.+++.+++++.|++ ||+|||+++..+.++++++.+..++ ++|++.++
T Consensus 52 ~~~i~~~---~~~s~~~~g~--~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 126 (467)
T PRK09556 52 QNDMIST---YGLSTTELGM--IGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMI 126 (467)
T ss_pred hHHHHHh---cCCCHHHHHH--HHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHH
Confidence 5544444 7888888655 9999999999999999999 9999999999888888877766654 68999999
Q ss_pred HHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhccc---chHHHHHHHHHHHHHHHH
Q 012500 90 ICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL---NWRYAFWGEAILMLPFAV 166 (462)
Q Consensus 90 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~---gwr~~f~~~~~~~~~~~~ 166 (462)
+.|+++|++.+...|...++++||+|+++||+++++++.+.++|.++++.++.++.+.. +||..|.+.++++++..+
T Consensus 127 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i 206 (467)
T PRK09556 127 ALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGF 206 (467)
T ss_pred HHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987776643 699999998888887777
Q ss_pred HHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhh-HHHHhhhh
Q 012500 167 LAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQD-TKVLLQEK 245 (462)
Q Consensus 167 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 245 (462)
+.+++.++++++.+..++++.. .+ ...++....++++ . +..+. .++.+++|
T Consensus 207 ~~~~~~~~~p~~~~~~~~~~~~---------~~---------~~~~~~~~~~~~~-------~---~~~~~~~~~~l~~~ 258 (467)
T PRK09556 207 IGLRYGSDSPEELGWGKAEEIF---------GE---------PISEEDKETESTD-------M---TKWQIFVEYVLKNP 258 (467)
T ss_pred HHHHhCCCChhhcCCCChhhcc---------cC---------ccchhhhcccccc-------C---cHHHHHHHHHHcCh
Confidence 7766655543221111100000 00 0000000000000 0 00011 23468899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHH
Q 012500 246 VYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL 324 (462)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 324 (462)
.+|...+..++......+...|+|.|+++.+|.+..+. .......++.+++.++.|+++||+++| +........
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r-----~~~~~~~~~ 333 (467)
T PRK09556 259 VIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGR-----RALVACIAL 333 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----chHHHHHHH
Confidence 99999888888888888888999999999899886555 444667788999999999999999987 443332222
Q ss_pred HHHHH-H-HHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHh--
Q 012500 325 GAISC-L-TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD-- 400 (462)
Q Consensus 325 ~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~-- 400 (462)
..... + .....++.+...+..++.+++.............+..|++.++++.|+.+...+..|.+++|.+.|++.|
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~ 413 (467)
T PRK09556 334 ALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPT 413 (467)
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccc
Confidence 22211 1 1122223333334444444333222222234455888889999999999877776577899999999999
Q ss_pred ----------hhcchhHHHHHHHHHHHHHHHHHH
Q 012500 401 ----------HVNNWRKTTLALTSIFFLAAGIWF 424 (462)
Q Consensus 401 ----------~~g~~~~~~~~~~~~~~~~~~~~~ 424 (462)
..+ |+..|.+..++.+++.+..+
T Consensus 414 ~~g~~~~~~~~~~-~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 414 KNGTPIFGYTLTG-WAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred ccccccccccccC-hHHHHHHHHHHHHHHHHHHH
Confidence 334 88888777666666555444
No 6
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-37 Score=273.07 Aligned_cols=363 Identities=34% Similarity=0.552 Sum_probs=279.6
Q ss_pred hHHHHHHHHHHH-------hhhhh-hhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHH
Q 012500 4 CIHVLLCLIGLI-------LKRSM-KKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTF 74 (462)
Q Consensus 4 ~i~~~~~~~~~~-------~p~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~ 74 (462)
..+.++|+.+.+ +|... ..+..++.+++..|. +.+.+.+.+.+++|+.|++ |||+||+++..|..+|.+
T Consensus 33 ~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gl--l~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~ 110 (493)
T KOG1330|consen 33 LTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGL--LQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTL 110 (493)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccc--hhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHH
Confidence 445556666555 44444 334447889998777 9999999999999999999 999999999999999999
Q ss_pred HHHhhhccchhHHHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccc-hHHH
Q 012500 75 ATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYA 153 (462)
Q Consensus 75 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr~~ 153 (462)
+.++++++..||++.++|.+.|+|.+...|+++++++|.+|.++|++++++++.+..+|..+|.+++..+.+..+ |||.
T Consensus 111 Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~a 190 (493)
T KOG1330|consen 111 AVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWA 190 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998776 9999
Q ss_pred HHHHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhc
Q 012500 154 FWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQ 233 (462)
Q Consensus 154 f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (462)
|+..++++++++++.+++.+|..+..+++.+.+.. . .....+
T Consensus 191 f~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~-----------------------~---------------~~~~ts 232 (493)
T KOG1330|consen 191 FRGSAVLGVIVGLLVFLFVREPERGARDEVDGENK-----------------------M---------------VKPFTS 232 (493)
T ss_pred EEeehHHHHHHHHHHHhhccCcccccccccccCCc-----------------------C---------------CCCccc
Confidence 99999999999999999987744321111100000 0 011223
Q ss_pred chhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHh---CCC-cchhhhhhhHHHhhhhhhhhhhHHHhhhcc
Q 012500 234 FSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIY---HMS-NADMMFGGVTIVCGIVGTISGGFILDQMGA 309 (462)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~ 309 (462)
.+++.+.+.+++.+....+.+....+....+..|.|.+....+ +.+ .....+..+...++.+|.+.+|.++||+.+
T Consensus 233 ~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~ 312 (493)
T KOG1330|consen 233 VWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSR 312 (493)
T ss_pred hHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHH
Confidence 4667888888888888888888888888888888888655443 323 234466788899999999999999999876
Q ss_pred ccccchhHH-----H-HHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHH
Q 012500 310 TISNAFKLL-----S-AATFLGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTV 381 (462)
Q Consensus 310 ~~~~~~~~~-----~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (462)
+.++..+.. . .+....+....+.... .+.+..++++.+.-......+.+...+..+.+||+.|.++.++...
T Consensus 313 ~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~ 392 (493)
T KOG1330|consen 313 IFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTV 392 (493)
T ss_pred hcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHH
Confidence 544421111 1 1112222222222221 2344445555554455556777888899999999999999999998
Q ss_pred HHhhhccccchhHHHHHHhhhcchh
Q 012500 382 SIHIFGDVPSSPLVGVLQDHVNNWR 406 (462)
Q Consensus 382 ~~~~~g~~~~~~~~g~l~~~~g~~~ 406 (462)
+...+|.+.+|++.|.+.|+..+++
T Consensus 393 ~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 393 FEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred HHHHhccCCCcceehhHHHHhhCCC
Confidence 9999999999999999999986665
No 7
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=3.1e-36 Score=276.54 Aligned_cols=354 Identities=12% Similarity=0.030 Sum_probs=253.6
Q ss_pred HHHHHHHHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhH
Q 012500 8 LLCLIGLILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFW 86 (462)
Q Consensus 8 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~ 86 (462)
....++.++|.+.++ ++.++.+.++ ..+.+.+++.+++++.|++ ||+|||+++..+......+.+....++|++
T Consensus 6 ~~~~~~~~lp~i~~~---~~~s~~~~g~--~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~ 80 (368)
T TIGR00903 6 IWVTFSPVLSLVAED---IDVSKEELGL--LAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYE 80 (368)
T ss_pred HHHHHHhhHHHHHHH---hCcCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHH
Confidence 455677788866665 7888888665 9999999999999999999 999999887766555555443333347999
Q ss_pred HHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHH
Q 012500 87 SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAV 166 (462)
Q Consensus 87 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~ 166 (462)
.+++.|+++|++.+. .+.....++|++|+++|++++++.+.+..+|.++++++++.+.+++|||+.|++.++++++..+
T Consensus 81 ~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~ 159 (368)
T TIGR00903 81 WLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGII 159 (368)
T ss_pred HHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH
Confidence 999999999999986 4556667799999999999999999999999999999999999999999999999998888888
Q ss_pred HHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhH
Q 012500 167 LAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKV 246 (462)
Q Consensus 167 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (462)
+.++..||++++.+ + .. + .+ +..+++++++++|.
T Consensus 160 ~~~~~lp~~p~~~~--~---~~-------------------~---~~-------------------~~~~~~~~ll~~~~ 193 (368)
T TIGR00903 160 LVLAALPALPFQAA--E---GF-------------------G---FK-------------------DAVKEFGALAGRKD 193 (368)
T ss_pred HHHHHcCCCCCCCC--C---Cc-------------------c---hH-------------------HHHHHHHHHHcChh
Confidence 77777787543210 0 00 0 00 00123667899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchhhhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHH
Q 012500 247 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 326 (462)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 326 (462)
+|...+..++.....+++.+|+|.|+++ .+.+........+..+.+ .+..++++||..|+..+. ........+.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~~~~~~~l~~~~g---~~g~~~~~d~~~r~~~r~-~~~~~~~~~~a 268 (368)
T TIGR00903 194 LWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDIAGDAVALAILAG---LIGVAVIPDRVARAGLRS-IYIRAAALLIA 268 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChHHHHHHHHHHHHH---HHHHHHhhHHhhhhhhHH-HHHHHHHHHHH
Confidence 9999999999999999999999999976 456643323333344444 444578889887652211 22222222223
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchh
Q 012500 327 ISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR 406 (462)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 406 (462)
..........+....+...++.+++....++..+.+..|.+|++.|+++.|+.+...+. +++.+|.+.+.+.. + ..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~-~~~~~~~~~~~~~~--~-~~ 344 (368)
T TIGR00903 269 AFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRA-ISVALALAAMLFIS--S-AE 344 (368)
T ss_pred HHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHH-HHHHHHHHHHHHhc--C-HH
Confidence 32223232333334444555555555556666777888999999999999999866666 88888988888774 3 44
Q ss_pred HHHHHHHHHHHHHHHH
Q 012500 407 KTTLALTSIFFLAAGI 422 (462)
Q Consensus 407 ~~~~~~~~~~~~~~~~ 422 (462)
..|...+...+++.+.
T Consensus 345 ~~f~~~~~~~~i~~~~ 360 (368)
T TIGR00903 345 AYFTFLAILITIAFAI 360 (368)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5566665555544444
No 8
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=2.4e-36 Score=283.39 Aligned_cols=361 Identities=17% Similarity=0.211 Sum_probs=252.1
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccc
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS 104 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 104 (462)
++.++.+.++ ..+.+.+++.+++++.|++ ||+|||+++..++++++++++++++++|++.+++.|+++|++.+...|
T Consensus 38 ~~~s~~~~g~--~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 115 (412)
T TIGR02332 38 LGLSATMFGL--AATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLP 115 (412)
T ss_pred cCCCHHHHHH--HHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHH
Confidence 7888888666 9999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred cccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhc------ccchHHHHHHHHHHHHHHHHHHhhccccccCC
Q 012500 105 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS------HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG 178 (462)
Q Consensus 105 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~------~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 178 (462)
....++.|++|+++|++++++++.+.++|.++++.+++++.+ ..|||+.|++.++++++..++.++++||++++
T Consensus 116 ~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~ 195 (412)
T TIGR02332 116 GILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDK 195 (412)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCccc
Confidence 999999999999999999999999999999999999998764 46999999999998887777777777876543
Q ss_pred CCC-ccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHH
Q 012500 179 FAP-AESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAY 257 (462)
Q Consensus 179 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (462)
.+- ++++++... +..+.... +.++.... .++. + . .....+++++ ++.+|...+..++.
T Consensus 196 ~~~l~~~~~~~~~----~~~~~~~~------~~~~~~~~-~~~~--~----~---~~~~~~~~~~-~~~~~~~~~~~~~~ 254 (412)
T TIGR02332 196 AKWLDEEDKKALK----EMIDNDQL------TLEQPEGA-FAHA--A----M---PQRSMLREIF-TPAIMLYTLAYFCL 254 (412)
T ss_pred CCCCCHHHHHHHH----HHHHhccc------cccccccc-cccc--c----c---cHHHHHHHhc-ChHHHHHHHHHHHH
Confidence 210 000000000 00000000 00000000 0000 0 0 0011244444 57778777777777
Q ss_pred HHHHHHHHHHhhHHHHHH-hCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhH-HHHHHHHHHHHHHHHHH
Q 012500 258 NFVIGAYSYWGPKAGYNI-YHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKL-LSAATFLGAISCLTAFC 334 (462)
Q Consensus 258 ~~~~~~~~~~~p~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 334 (462)
....+.+.+|+|.++++. .+.++... .......++.+++.++.|+++||+++| +. .............+...
T Consensus 255 ~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r-----~~~~~~~~~~~~~~~~~~~~ 329 (412)
T TIGR02332 255 TNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKER-----KHHTALPYLFAAAGWLLASA 329 (412)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCcc-----HHHHHHHHHHHHHHHHHHHh
Confidence 888888999999999873 35554433 445778888999999999999999876 43 22222222222222222
Q ss_pred hhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHH
Q 012500 335 LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTS 414 (462)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~ 414 (462)
.++....+...++..++.....+.......+..|++.|+++.|+.+...+. |++++|.+.|.+.|..|+|...+.+..+
T Consensus 330 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~-g~~~~p~~~g~i~~~~g~~~~~~~~~~~ 408 (412)
T TIGR02332 330 TDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNI-GSALSPFLIGILKDATGSFNSGLWFVAA 408 (412)
T ss_pred cCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhh-hhhhhhhhcccccccCCCCchhHHHHHH
Confidence 222222222222222222222222223334567889999999999877776 9999999999999998888877766554
Q ss_pred H
Q 012500 415 I 415 (462)
Q Consensus 415 ~ 415 (462)
+
T Consensus 409 ~ 409 (412)
T TIGR02332 409 L 409 (412)
T ss_pred H
Confidence 4
No 9
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=2.5e-35 Score=282.89 Aligned_cols=336 Identities=10% Similarity=0.016 Sum_probs=225.8
Q ss_pred HHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHH--------HHHHHHHhhcccccccccccch
Q 012500 39 VLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWS--------IAICRMLVGVGEASFISLAAPF 109 (462)
Q Consensus 39 ~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~g~~~~~~~~~ 109 (462)
.+...++..+++++.|++ ||+|||+++..++++++++++++++++|+++ ++++|+++|++.|..++...++
T Consensus 63 ~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~ 142 (490)
T PRK10642 63 FSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIF 142 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHH
Confidence 477889999999999999 9999999999999999999999999999875 8899999999999999999999
Q ss_pred hcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhh--------cccchHHHHHHHHHHHHHHHHHHhhccccccCCCCC
Q 012500 110 IDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAP 181 (462)
Q Consensus 110 i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~ 181 (462)
+.|++|+++||++.++.+.+..+|..+|+.+...+. .++|||++|++.++++++ .++.....||++++...
T Consensus 143 ~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~-~~~~~~~~~esp~~~~~ 221 (490)
T PRK10642 143 VAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII-GLYLRHALEETPAFQQH 221 (490)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH-HHHHHHcCCCChhHHHH
Confidence 999999999999999999888888888886665443 257999999997765543 33334445665443111
Q ss_pred ccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhh-hHHHH-HHHHHHHHHH
Q 012500 182 AESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE-KVYVV-NVLGYIAYNF 259 (462)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~ 259 (462)
.++.++. ++ +... +++ ..++++++++ +..+. .....++...
T Consensus 222 ~~~~~~~------------~~-----~~~~-------~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (490)
T PRK10642 222 VDKLEQG------------DR-----EGLQ-------DGP-------------KVSFKEIATKHWRSLLTCIGLVIATNV 264 (490)
T ss_pred HHhhhhh------------cc-----cccc-------ccc-------------cCCHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 0000000 00 0000 000 0123334432 22222 2222334456
Q ss_pred HHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHH-HHH--HHHHh
Q 012500 260 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI-SCL--TAFCL 335 (462)
Q Consensus 260 ~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~ 335 (462)
.++....|+|.|+++..+.+.... .......++.+++.++.|+++||+||| +.+..+.....+ ... .....
T Consensus 265 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~ 339 (490)
T PRK10642 265 TYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRR-----PFVILGSVALFVLAIPAFILINS 339 (490)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHHHHhC
Confidence 677788899999988888775444 334556677888999999999999998 655544432222 111 11112
Q ss_pred hhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHH
Q 012500 336 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 415 (462)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 415 (462)
++....++..++.+++.+...+.......+.+|++.|+++.|+.+..... ++.++|.+.+++.+..+++...++...+.
T Consensus 340 ~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~-~g~~~p~i~g~l~~~~~~~~~~~~~~~~~ 418 (490)
T PRK10642 340 NVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVL-VAGLTPTLAAWLVESTQNLMMPAYYLMVV 418 (490)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCchHHHHHHHHH
Confidence 22333344444445554444455556666789999999999986455555 56789999999988766554444444433
Q ss_pred HHH
Q 012500 416 FFL 418 (462)
Q Consensus 416 ~~~ 418 (462)
.++
T Consensus 419 ~~i 421 (490)
T PRK10642 419 AVI 421 (490)
T ss_pred HHH
Confidence 333
No 10
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=2.1e-35 Score=278.01 Aligned_cols=380 Identities=16% Similarity=0.179 Sum_probs=273.8
Q ss_pred HHHHHHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHH
Q 012500 10 CLIGLILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSI 88 (462)
Q Consensus 10 ~~~~~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l 88 (462)
..++...|.+.++ ++.++.+.+. +.+.+.++..+++++.|++ ||+|||+++..+.++.+++.+++++++|++.+
T Consensus 11 ~~~~~~~~~~~~~---~g~s~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
T TIGR00893 11 ANLSFAAPMLQED---LGLSAAQYGY--VFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSL 85 (399)
T ss_pred HhhhHhHHHHHHh---hCCChhhHHH--HHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHH
Confidence 4556667754444 6788888655 9999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHH
Q 012500 89 AICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLA 168 (462)
Q Consensus 89 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 168 (462)
+++|++.|++.+...+....++.|++|+++|++++++.+....+|..+++.+++.+.++.+||+.|++.+++.++..+..
T Consensus 86 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 165 (399)
T TIGR00893 86 YILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLW 165 (399)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998887777776
Q ss_pred hhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHH
Q 012500 169 FVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYV 248 (462)
Q Consensus 169 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (462)
++..||++++.+..+++++. .. .+ ...++.+..++ .+....+.++.+++|.++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~---~~---~~----------~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~ 218 (399)
T TIGR00893 166 LKFIPDPPQKAKWLTEEEKY---IV---VG----------GLLAEQQGKGP-----------STPKKYQIKELLKDRRVW 218 (399)
T ss_pred hheecCCCCccccCCHHHHh---hc---ch----------hhccccccccc-----------cCCCccchHHHhcCHHHH
Confidence 66666543321110000000 00 00 00000000000 000123456778889999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHH
Q 012500 249 VNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI 327 (462)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 327 (462)
...+..++..........+.|.|+++..+.++... .......++.+++.++.|++.||++||.................
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (399)
T TIGR00893 219 GLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLV 298 (399)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Confidence 88888888888888889999999998888876554 44566778889999999999999998831100000111111111
Q ss_pred HHHHHHH---hhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcc
Q 012500 328 SCLTAFC---LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN 404 (462)
Q Consensus 328 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~ 404 (462)
....... .++.+.......+.+++. ...+....+..+..|++.|+++.|+.+...+. |..++|.+.|.+.|..|+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~~~~~i~g~l~~~~g~ 376 (399)
T TIGR00893 299 LSLLMFATNYVNIPYAALALVALGFFGL-GAGAIGWALISDNAPGNIAGLTGGLINSLGNL-GGIVGPIVIGAIAATTGS 376 (399)
T ss_pred HHHHHHHhccchhHHHHHHHHHHHHhch-hhhhHHHHHHHhhcChhHHHHHHHHHHHHHHH-hhhhhhHHhhhhccCCCc
Confidence 1111111 122333333333333333 35667788888999999999999999766665 999999999999998876
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q 012500 405 WRKTTLALTSIFFLAAGIW 423 (462)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~ 423 (462)
+...+...+.+.+++.+..
T Consensus 377 ~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 377 FAGALMVVAALALIGALSY 395 (399)
T ss_pred hhHHHHHHHHHHHHHHHHH
Confidence 7777777666655544433
No 11
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=5.1e-35 Score=273.06 Aligned_cols=345 Identities=12% Similarity=-0.030 Sum_probs=253.5
Q ss_pred HHHHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHH
Q 012500 12 IGLILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAI 90 (462)
Q Consensus 12 ~~~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 90 (462)
.+.++|.+.++ ++.|+.+.++ ..+.+.+++.+++++.|++ ||+|||+++..+..+++++.+++++++|++.+++
T Consensus 28 ~~~~lp~i~~~---~~~s~~~~g~--~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~ 102 (393)
T PRK09705 28 VGPLLPQLRQA---SGMSFSVAAL--LTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLS 102 (393)
T ss_pred cchhHHHHHHH---hCCCHHHHHH--HHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHH
Confidence 44446755544 7888888655 9999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhccc-chHHHHHHHHHHHHHHHHHHh
Q 012500 91 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAF 169 (462)
Q Consensus 91 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~ 169 (462)
+|+++|++.+...+....++.|++| ++|+++++++..+...|..+++.+++.+.++. +||+.+.+.++..++..+..+
T Consensus 103 ~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~ 181 (393)
T PRK09705 103 SALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWW 181 (393)
T ss_pred HHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999997 88999999999999999999999999988875 899998877665443332222
Q ss_pred hccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHH
Q 012500 170 VIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVV 249 (462)
Q Consensus 170 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (462)
...++. +++++.. + .+.++.++++..|.
T Consensus 182 ~~~~~~------~~~~~~~-~---------------------------------------------~~~~~~l~~~~~~~ 209 (393)
T PRK09705 182 WQSARE------VASSHKT-T---------------------------------------------TTPVRVVFTPRAWT 209 (393)
T ss_pred HHhcCC------CccccCC-C---------------------------------------------cCCcccccCHhHHH
Confidence 211111 0000000 0 00112345566666
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHH
Q 012500 250 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS 328 (462)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 328 (462)
..+..++....+.....|.|.++++ .+.+.... ...+...++.++++++.+++.||+++| +....+..+....
T Consensus 210 l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~-----~~~~~~~~l~~~~ 283 (393)
T PRK09705 210 LGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRR-----KLLMLALVLQLVG 283 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccch-----HHHHHHHHHHHHH
Confidence 6666666677777888999999987 67776554 455778889999999999999999987 6655554444443
Q ss_pred HHHHHHhh-hhHHHHHHHHHHHHHHHhccccceeeeeccCC-cchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchh
Q 012500 329 CLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVK-PSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR 406 (462)
Q Consensus 329 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 406 (462)
.......+ +.... ...+.+++.+...+.......+..+ ++++++..|+.+...+. +..++|.+.|++.|..|++.
T Consensus 284 ~~~~~~~~~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-~~~~gp~~~G~l~~~~g~~~ 360 (393)
T PRK09705 284 FCGFIWLPLQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFI-IAGLAPWFSGVLRSISGNYL 360 (393)
T ss_pred HHHHHHccchHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCch
Confidence 33322222 22222 2233455555555544445556665 47899999999766665 78899999999999999888
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012500 407 KTTLALTSIFFLAAGIW 423 (462)
Q Consensus 407 ~~~~~~~~~~~~~~~~~ 423 (462)
..+.+.+++.+...++.
T Consensus 361 ~~~~~~~~~~~~~~~~~ 377 (393)
T PRK09705 361 MDWAFHALCVVGLMIIT 377 (393)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 87877776655544443
No 12
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=6.2e-35 Score=277.01 Aligned_cols=367 Identities=12% Similarity=0.043 Sum_probs=258.1
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHH-HHHHhhccccccc
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAI-CRMLVGVGEASFI 103 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~g~~~ 103 (462)
++.++.+.+. ..+.+.++..+++++.|++ ||+|||++++.+.++.+++.++++++++++.+++ .|+++|++.+...
T Consensus 49 ~g~s~~~~~~--~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~ 126 (455)
T TIGR00892 49 FQATYSETAW--ISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNF 126 (455)
T ss_pred hCcchhHHHH--HHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhh
Confidence 7788888555 8899999999999999999 9999999999999999999999999999998875 5799999999777
Q ss_pred ccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCcc
Q 012500 104 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAE 183 (462)
Q Consensus 104 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 183 (462)
+....++.++++ ++|+++.++.+.+..+|..++|.+++.+.+.+|||+.|++.+++.++..+..++..|+.......++
T Consensus 127 ~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 205 (455)
T TIGR00892 127 QPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKS 205 (455)
T ss_pred hHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccc
Confidence 777888899996 8999999999999999999999999999999999999999998877666555555443211000000
Q ss_pred ccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHH
Q 012500 184 SGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGA 263 (462)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (462)
+.+. ..+. . ...++..... . . +..++ ..+. +++++|.++......++.......
T Consensus 206 ~~~~--------~~~~--~--~~~~~~~~~~--~-~---------~~~~~-~~~~-~~~~~~~~~~~~~~~~l~~~~~~~ 259 (455)
T TIGR00892 206 KSKE--------GLPP--D--GSTKKLSKKS--T-A---------EKINR-FLDF-SLFTHRGFLVYLSGNVIMFLGFFA 259 (455)
T ss_pred cccc--------cCCC--C--Cccccccccc--h-h---------hhhhh-hcch-HHhcCchHHHHHHHHHHHHHHccc
Confidence 0000 0000 0 0000000000 0 0 00000 1112 467888888887777777777777
Q ss_pred HHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 012500 264 YSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFL 342 (462)
Q Consensus 264 ~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (462)
...++|.|.++ .+.++... ...++..++.++++++.|++.||...+..+ +..+..+........++....++.+..+
T Consensus 260 ~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~-~~~~~~~~~~~~l~~ll~~~~~~~~~~~ 337 (455)
T TIGR00892 260 PIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHV-QYLFSFALLFNGLTHLLCALAGDYTGLV 337 (455)
T ss_pred hHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHH-HHHHHHHHHHHHHHHHHHHHhchHHHHH
Confidence 77888999876 57775554 444667788888999999999974321110 0122222222222223333345556666
Q ss_pred HHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHHHHHHHH
Q 012500 343 ALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGI 422 (462)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 422 (462)
....+.+++.+...+.....+.+.+|+++++++.|+.+...+. |.+++|.+.|.+.|..++|...++..+++.+++.+.
T Consensus 338 i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l-g~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 338 IYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECC-AVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred HHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHH-HHHccccceeeeehhcCCcchHHHHhhHHHHHHHHH
Confidence 6667777777777777788888889999999999999766666 999999999999998877888887777665555444
Q ss_pred HH
Q 012500 423 WF 424 (462)
Q Consensus 423 ~~ 424 (462)
..
T Consensus 417 ~~ 418 (455)
T TIGR00892 417 LA 418 (455)
T ss_pred HH
Confidence 33
No 13
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=2.8e-34 Score=271.74 Aligned_cols=358 Identities=13% Similarity=0.044 Sum_probs=233.0
Q ss_pred HHHHHHhhhhhhhccccccccccccc-hhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhH-
Q 012500 10 CLIGLILKRSMKKKKFLSLRKLAAGS-SVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFW- 86 (462)
Q Consensus 10 ~~~~~~~p~~~~~~~~~~~~~~~~~~-s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~- 86 (462)
..+++..|.+.++....+.++.+.+. ....+...++..+++++.|++ ||+|||+++..++++++++++++++++|+.
T Consensus 39 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 118 (432)
T PRK10406 39 YVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYET 118 (432)
T ss_pred HHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchh
Confidence 33455566444442111233333222 123344556666999999999 999999999999999999999999998874
Q ss_pred -------HHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhh--------cccchH
Q 012500 87 -------SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG--------SHLNWR 151 (462)
Q Consensus 87 -------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~--------~~~gwr 151 (462)
.+++.|+++|++.|..++...++++|++|+++|+++.++.+.+...|..+++.+...+. +.+|||
T Consensus 119 ~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr 198 (432)
T PRK10406 119 IGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWR 198 (432)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchH
Confidence 58999999999999999999999999999999999999999988888888887765543 257999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhh
Q 012500 152 YAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQL 231 (462)
Q Consensus 152 ~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (462)
++|++.++++++... .....||+++. ++ + . .++
T Consensus 199 ~~F~i~~~~~ll~~~-~~~~~~e~~~~----~~-~-~------------------------------~~~---------- 231 (432)
T PRK10406 199 IPFALGAVLAVVALW-LRRQLDETSQQ----ET-R-A------------------------------LKE---------- 231 (432)
T ss_pred HHHHHHHHHHHHHHH-HHhcCCCCchH----HH-h-h------------------------------hcc----------
Confidence 999998776654322 22222332110 00 0 0 000
Q ss_pred hcchhhHHHHhhhhHHHHHHHHHHHH-HHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhcc
Q 012500 232 SQFSQDTKVLLQEKVYVVNVLGYIAY-NFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGA 309 (462)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~ 309 (462)
..+++++++++..+...+...+. ....+.+..|+|.|+++..+.+..+. ....+..+...++.++.|+++||++|
T Consensus 232 ---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~gr 308 (432)
T PRK10406 232 ---AGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGR 308 (432)
T ss_pred ---cccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 01355677788777666554443 56677788999999988888876444 33455566667788888999999999
Q ss_pred ccccchhHHHHHHHHHHHHHH-HH--HH-hhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhh
Q 012500 310 TISNAFKLLSAATFLGAISCL-TA--FC-LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 385 (462)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~-~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (462)
| +.+.....+...... .. .. .++....+....+..+..+...+....+..|.+|++.|+++.|+.+...+.
T Consensus 309 r-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~ 383 (432)
T PRK10406 309 R-----TSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANA 383 (432)
T ss_pred h-----HHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHH
Confidence 8 555444333222211 11 11 112222222222222333333334456677889999999999999766555
Q ss_pred hccccchhHHHHHHhhhcchhHHHHHHHHHHHHHHHHH
Q 012500 386 FGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 423 (462)
Q Consensus 386 ~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 423 (462)
+.+...|.+.+.+ +..|.+...+++.+...+++.+..
T Consensus 384 ~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~ 420 (432)
T PRK10406 384 LFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVS 420 (432)
T ss_pred HHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHH
Confidence 4344577777754 556666555555555544444433
No 14
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=4.1e-35 Score=285.98 Aligned_cols=394 Identities=15% Similarity=0.126 Sum_probs=270.1
Q ss_pred HHHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHH
Q 012500 13 GLILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAIC 91 (462)
Q Consensus 13 ~~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 91 (462)
+.++|.+..+ ++.+..+.++ +.+.+.++.+++++++|++ ||+|||+++++++++.++++++++++++++.++++
T Consensus 187 s~ilp~i~~~---~gls~~~~g~--l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~ 261 (742)
T TIGR01299 187 GFVLPSAEKD---LCIPDSGKGM--LGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFC 261 (742)
T ss_pred HHHHHHHHHH---hCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 3345644443 6777777544 9999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcc-------------cchHHHHHHHH
Q 012500 92 RMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-------------LNWRYAFWGEA 158 (462)
Q Consensus 92 r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-------------~gwr~~f~~~~ 158 (462)
|++.|++.|...+...+++.|++|+++|++.+++...+..+|.++++.++..+... .+||+.+++.+
T Consensus 262 R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~ 341 (742)
T TIGR01299 262 RLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCA 341 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888766543 36999998887
Q ss_pred HHHHHHHHHHhhccccccCCCCCccccccccccccccccccccccc--cccc-----cccchhhhh-----hhhcc----
Q 012500 159 ILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLND--HVSE-----DISDQASER-----SIKSI---- 222 (462)
Q Consensus 159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~-----~~~~~---- 222 (462)
+++++. ++..+++||+|++...+.+.++. .+...++...+... ...+ ..+.....+ ++...
T Consensus 342 lp~ll~-ll~~~~lPESPrwL~~~gr~~eA--~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (742)
T TIGR01299 342 FPCVFA-IGALTFMPESPRFFLENGKHDEA--WMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQ 418 (742)
T ss_pred HHHHHH-HHHHHHcCCCHHHHHHCCCHHHH--HHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhh
Confidence 765544 44556679998875332222111 11111111111000 0000 000000000 00000
Q ss_pred -ccccchhhhhcchhhHHHHhhhhHHH---HHHHHHHHHHHHHHHHHHHhhHHHHHH----h------------------
Q 012500 223 -GESRFLNQLSQFSQDTKVLLQEKVYV---VNVLGYIAYNFVIGAYSYWGPKAGYNI----Y------------------ 276 (462)
Q Consensus 223 -~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~----~------------------ 276 (462)
...+........+.+++.+++++..+ .+.+.+++..+.++++..|+|.++.+. +
T Consensus 419 ~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (742)
T TIGR01299 419 RCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFN 498 (742)
T ss_pred cchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccc
Confidence 00000111223344566666654433 444556777888999999999875441 0
Q ss_pred -------------------CC-----C-----------------------------------------------------
Q 012500 277 -------------------HM-----S----------------------------------------------------- 279 (462)
Q Consensus 277 -------------------~~-----~----------------------------------------------------- 279 (462)
+. +
T Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 578 (742)
T TIGR01299 499 FTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLH 578 (742)
T ss_pred cchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccc
Confidence 00 0
Q ss_pred -----------c-----chhhhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 012500 280 -----------N-----ADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLA 343 (462)
Q Consensus 280 -----------~-----~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (462)
. .......+..++.+++.+++|+++||+||| +.+..+.++.++++++....++....++
T Consensus 579 ~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr-----~~l~~~~~lsai~~ll~~~~~s~~~ll~ 653 (742)
T TIGR01299 579 NKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRL-----RMLAGSMVLSCISCFFLSFGNSESAMIA 653 (742)
T ss_pred cCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHHHHHHHHccHHHHHH
Confidence 0 001223455678899999999999999998 7777777777776666555555555555
Q ss_pred HHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHHHHHHHH
Q 012500 344 LFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGI 422 (462)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 422 (462)
+.++.+++.+..++....++.+.+|++.|++++|+.+...+. |.+++|++.+.+.+.. ...++++.+++.++++++
T Consensus 654 ~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rl-Gaiigp~i~g~L~~~~--~~~pf~i~a~~lll~~ll 729 (742)
T TIGR01299 654 LLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKA-AAVLGILIFGSFVGIT--KAAPILFASAALACGGLL 729 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHH
Confidence 566667777777777888889999999999999999766665 9999999999888742 345566555555444443
No 15
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=1.8e-34 Score=271.97 Aligned_cols=354 Identities=16% Similarity=0.128 Sum_probs=256.9
Q ss_pred HHHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHH
Q 012500 13 GLILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAIC 91 (462)
Q Consensus 13 ~~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 91 (462)
+...|.+.++ ++.++.+.+. ..+.+.++..+++++.|++ ||+|||+++..+.++..++.+++++++|++.+++.
T Consensus 35 ~~~~~~~~~~---~~~s~~~~g~--~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (406)
T PRK11551 35 GVAAPRMAQE---FGLDVAQMGW--AFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVA 109 (406)
T ss_pred HHHHHHHHHH---hCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 4446655544 6788888555 9999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhc
Q 012500 92 RMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 171 (462)
Q Consensus 92 r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 171 (462)
|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+||+.|++.+++.++..+...+.
T Consensus 110 ~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (406)
T PRK11551 110 RLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRW 189 (406)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999888999999999887766666666666
Q ss_pred cccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHH
Q 012500 172 KPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNV 251 (462)
Q Consensus 172 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (462)
.||++++.++++ +.. +.+.. .+...+..+.+..+...
T Consensus 190 l~~~~~~~~~~~--~~~------------------------~~~~~-----------------~~~~~~~~~~~~~~~~~ 226 (406)
T PRK11551 190 LPESRAFAQAAG--AGK------------------------QRAPV-----------------LRALFGEGRATATLLLW 226 (406)
T ss_pred CCCChhHHhccC--cch------------------------hhhhh-----------------HHHHhhhhhhhHHHHHH
Confidence 676433211000 000 00000 00000000112222233
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHH
Q 012500 252 LGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 330 (462)
Q Consensus 252 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (462)
...++.....+....|.|.++++ .|.++... .......++.+++.++.|++.||+++| +.+............
T Consensus 227 ~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~ 300 (406)
T PRK11551 227 ISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPR-----RVVLLIYAGILASLA 300 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHH-----HHHHHHHHHHHHHHH
Confidence 33334444555667789999887 56665444 444667788899999999999999987 665554444444433
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHH
Q 012500 331 TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTL 410 (462)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 410 (462)
.....++.+.......+.+++.....+.......+.+|+++|+++.|+.+...+. |..++|.+.|.+.|+.+++...+.
T Consensus 301 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~~g~~~~g~l~~~~~~~~~~~~ 379 (406)
T PRK11551 301 ALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRL-GSMAGPLLAGQLLALGRSTVGVIG 379 (406)
T ss_pred HHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhH-HHHHHhhhHhhhhccCCchHHHHH
Confidence 3333444444555555566666666666777888899999999999999766665 899999999999998766655555
Q ss_pred HHHHHHHHHHH
Q 012500 411 ALTSIFFLAAG 421 (462)
Q Consensus 411 ~~~~~~~~~~~ 421 (462)
....+.+.+..
T Consensus 380 ~~~~~~~~~~~ 390 (406)
T PRK11551 380 ASIPVILVAAL 390 (406)
T ss_pred HHHHHHHHHHH
Confidence 55444444333
No 16
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=4.6e-34 Score=272.44 Aligned_cols=359 Identities=12% Similarity=0.005 Sum_probs=242.4
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRML 94 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 94 (462)
.|.+.++ ++.+..+.+. ..+.+.+++.+++++.|++ ||+|||+++..+.++++++.+++++++|++.+++.|++
T Consensus 59 ~~~l~~~---~gls~~~~g~--~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l 133 (476)
T PLN00028 59 LPIIRDN---LNLTKSDIGN--AGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFF 133 (476)
T ss_pred HHHHHHH---cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 4544443 7888888655 8889999999999999999 99999999999999999999999999999999999999
Q ss_pred hhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhh----c-----ccchHHHHHHHHHHHHHHH
Q 012500 95 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG----S-----HLNWRYAFWGEAILMLPFA 165 (462)
Q Consensus 95 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~----~-----~~gwr~~f~~~~~~~~~~~ 165 (462)
+|++.+... ....+++|++|+++|++++++.....++|..+++.+.+.+. + ..|||+.|++.++++++..
T Consensus 134 ~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~ 212 (476)
T PLN00028 134 IGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMG 212 (476)
T ss_pred HHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHH
Confidence 999988644 45667899999999999999998877777777766554432 2 2589999999999888777
Q ss_pred HHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhh
Q 012500 166 VLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEK 245 (462)
Q Consensus 166 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (462)
++.+++.++.++. +.++..+ + ...++ ++..+.+++.++++
T Consensus 213 l~~~~~~~~~p~~-----~~~~~~~-----------------~-------~~~~~-----------~~~~~~~~~~~~~~ 252 (476)
T PLN00028 213 ILVLTLGQDLPDG-----NYRELKK-----------------S-------GTMPK-----------DSFSKVLRYGVTNY 252 (476)
T ss_pred HHHHHHcCcCCCC-----chhhHHh-----------------c-------Ccccc-----------ccHHHHHHHHHcCc
Confidence 6666553322110 0000000 0 00000 00012356677888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccc-hhHH-HHHH
Q 012500 246 VYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNA-FKLL-SAAT 322 (462)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~-~~~~-~~~~ 322 (462)
++|...+..++.......+..+.|.|+.+.+|.++... .+.++..++.++++++.|+++||++||...+ ++.. ....
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~ 332 (476)
T PLN00028 253 RTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQ 332 (476)
T ss_pred hhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHH
Confidence 88877776665555556677889999988888886555 4557788999999999999999999864321 1222 2222
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhh-
Q 012500 323 FLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH- 401 (462)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~- 401 (462)
.+..+..+.....++.+...+.+++.+++.+...+.......+ ++++.++++.|+.+. ++.+++.+.+++.+.
T Consensus 333 ~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~g~~~g~~~~-----~g~lg~~i~~~l~~~~ 406 (476)
T PLN00028 333 TLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPF-VSRRSLGVISGLTGA-----GGNVGAVLTQLLFFTG 406 (476)
T ss_pred HHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcc-cChhhchhhhhhhhc-----cccHHHHHHHHHHHhc
Confidence 2222222333333344444444445555554444444444443 456788888888742 334455566666553
Q ss_pred -hcchhHHHHHHHHHHHHHHHHHHHH
Q 012500 402 -VNNWRKTTLALTSIFFLAAGIWFVG 426 (462)
Q Consensus 402 -~g~~~~~~~~~~~~~~~~~~~~~~~ 426 (462)
.++|...+++.+++.+++.++.+..
T Consensus 407 ~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 407 SSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred CCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 2458888888877776666655543
No 17
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=1.1e-33 Score=267.62 Aligned_cols=335 Identities=11% Similarity=0.047 Sum_probs=230.6
Q ss_pred HHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhH--------HHHHHHHHhhcccccccccccchhc
Q 012500 41 EFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFW--------SIAICRMLVGVGEASFISLAAPFID 111 (462)
Q Consensus 41 ~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~ 111 (462)
...++..+++++.|++ ||+|||+++..+.++++++++++++++|+. .++++|+++|++.|..++....++.
T Consensus 72 ~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~ 151 (438)
T PRK09952 72 VGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAV 151 (438)
T ss_pred HHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHH
Confidence 4456678899999999 999999999999999999999999999987 5888999999999999999999999
Q ss_pred ccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhh--------cccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCcc
Q 012500 112 DNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAE 183 (462)
Q Consensus 112 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 183 (462)
|++|+++|++..+..+.+..+|.+++..+...+. +++|||++|++.+++.++. +......||++++.+.++
T Consensus 152 e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~~~~~~~~ 230 (438)
T PRK09952 152 ESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESAEFEQQQH 230 (438)
T ss_pred HhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCChhHHHHHh
Confidence 9999999999999999999999999987776654 3579999999887765332 222222244322110000
Q ss_pred ccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHH-HHHHHHHHHH
Q 012500 184 SGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL-GYIAYNFVIG 262 (462)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 262 (462)
+.++ .+++ ....+.++++++.+.... ..++.....+
T Consensus 231 ~~~~------------------------------~~~~-------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 267 (438)
T PRK09952 231 EQAA------------------------------AKKR-------------IPVIEALLRHPGAFLKIIALRLCELLTMY 267 (438)
T ss_pred hccc------------------------------cccc-------------CCHHHHHHHchHHHHHHHHHHHHHHHHHH
Confidence 0000 0000 001223445665555543 3444455666
Q ss_pred HHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHH---hh-h
Q 012500 263 AYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC---LS-S 337 (462)
Q Consensus 263 ~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~ 337 (462)
....|.|.|+++..|.+.... .......+..+++.++.|+++||++|| +.+..+..+.......... .. +
T Consensus 268 ~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (438)
T PRK09952 268 IVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRR-----RVYITGALIGTLSAFPFFMALEAQSI 342 (438)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHHHHHHHHHHHHHHcCCh
Confidence 777899999988888775433 233445666778888999999999998 6655444433332221111 11 2
Q ss_pred hHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhc-chhHHHHHHHHHH
Q 012500 338 LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN-NWRKTTLALTSIF 416 (462)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~ 416 (462)
.+..+...++.+++.+...+....+..|.+|++.|+++.++.+.....+++.++|.+.+++.|..+ +|...+.+..++.
T Consensus 343 ~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~ 422 (438)
T PRK09952 343 FWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGC 422 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 223333344445555555666677888889999999999997655554588899999999998653 4666666666665
Q ss_pred HHHHHHHH
Q 012500 417 FLAAGIWF 424 (462)
Q Consensus 417 ~~~~~~~~ 424 (462)
+++.+..+
T Consensus 423 ~i~~v~~~ 430 (438)
T PRK09952 423 LISAMTAL 430 (438)
T ss_pred HHHHHHHH
Confidence 55544443
No 18
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=1.2e-33 Score=268.74 Aligned_cols=366 Identities=13% Similarity=0.054 Sum_probs=245.6
Q ss_pred ccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccc----hhHHHHHHHHHhhccccc
Q 012500 27 SLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSF----DFWSIAICRMLVGVGEAS 101 (462)
Q Consensus 27 ~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~G~~~g~ 101 (462)
+.++.+.+. ..+.+.++..+++++.|++ ||+|||+++..+.++.+++.+.+++++ +++.+++.|++.|++.+.
T Consensus 59 g~s~~~~g~--~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~ 136 (452)
T PRK11273 59 GFSRGDLGF--ALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGM 136 (452)
T ss_pred CCCHHHHHH--HHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhc
Confidence 677777555 9999999999999999999 999999999999999999999888763 788899999999999998
Q ss_pred ccccccchhcccCCCCCchhHHHHHHhhhhhhhh-hhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccccccCCCC
Q 012500 102 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVA-LGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA 180 (462)
Q Consensus 102 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 180 (462)
..+.....+.|++|+++|++++++++.+.++|.. .+|+++..+....+||+.|++.+++.++..++.+++.||++++..
T Consensus 137 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~ 216 (452)
T PRK11273 137 GWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCG 216 (452)
T ss_pred cchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcC
Confidence 8888888899999999999999999999999864 455554444444599999999998887777777777776543321
Q ss_pred Cccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhh-HHHHhhhhHHHHHHHHHHHHHH
Q 012500 181 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQD-TKVLLQEKVYVVNVLGYIAYNF 259 (462)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 259 (462)
.+++++.. + +..+ +..+ ++.++ .+. .+. .+.+++++.+|...+..++.+.
T Consensus 217 ~~~~~~~~--~-------~~~~------~~~~----~~~~~-------~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~ 267 (452)
T PRK11273 217 LPPIEEYK--N-------DYPD------DYNE----KHEQE-------LTA---KQIFMQYVLPNKLLWYIAIANVFVYL 267 (452)
T ss_pred CCChhhhh--h-------cccc------cccc----ccCCC-------ccH---HHHHHHHHHcChHHHHHHHHHHHHHH
Confidence 11110000 0 0000 0000 00000 000 011 2246788999988888777777
Q ss_pred HHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHH--hh
Q 012500 260 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC--LS 336 (462)
Q Consensus 260 ~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 336 (462)
..+....|.|.|+++..|.+.... ....+..++.+++.++.|+++||++++++. ........+.......... ..
T Consensus 268 ~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~--~~~~~~~~l~~~~~~~~~~~~~~ 345 (452)
T PRK11273 268 LRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRG--ATGVFFMTLVTIATIVYWLNPAG 345 (452)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcc--hHHHHHHHHHHHHHHHHHHhccc
Confidence 778888999999999888775444 344566788888999999999999543111 1111111221111111111 12
Q ss_pred hhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHH
Q 012500 337 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF 416 (462)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 416 (462)
+.+.........+...............+..|++.|+++.|+.+...+..+...+|.+.|.+.|+.| |...|...+.+.
T Consensus 346 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g-~~~~f~~~~~~~ 424 (452)
T PRK11273 346 NPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGS 424 (452)
T ss_pred ChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc-chHHHHHHHHHH
Confidence 2222233333333332222222233456888899999999999766666234457999999999987 777777777665
Q ss_pred HHHHHHHHHH
Q 012500 417 FLAAGIWFVG 426 (462)
Q Consensus 417 ~~~~~~~~~~ 426 (462)
+++++....+
T Consensus 425 ~~~~~~~~~~ 434 (452)
T PRK11273 425 ILAVILLIVV 434 (452)
T ss_pred HHHHHHHHHH
Confidence 5555544433
No 19
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=2.2e-33 Score=261.72 Aligned_cols=327 Identities=14% Similarity=0.106 Sum_probs=243.0
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccc
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS 104 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 104 (462)
++.++.+.+. ..+.+.++..+++++.|++ ||+|||+++..+.++.+++.+++++++|++.+++.|+++|++.+...+
T Consensus 50 ~g~s~~~~g~--~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 127 (394)
T PRK10213 50 LGISEGVAGQ--SVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWA 127 (394)
T ss_pred cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHH
Confidence 7888888666 8899999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred cccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCccc
Q 012500 105 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAES 184 (462)
Q Consensus 105 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 184 (462)
...+++.|++|+++|++++++...+.++|..++|.+++.+.+++|||+.|++.++++++..+......||.+++ +
T Consensus 128 ~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~-----~ 202 (394)
T PRK10213 128 MSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGE-----P 202 (394)
T ss_pred HHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCcc-----c
Confidence 99999999999999999999999999999999999999999999999999998877665554444334542110 0
Q ss_pred cccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHH
Q 012500 185 GKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAY 264 (462)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (462)
++ . .++.++.+++|.++...+..++........
T Consensus 203 ~~-~----------------------------------------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 235 (394)
T PRK10213 203 SH-Q----------------------------------------------KQNTFRLLQRPGVMAGMIAIFMSFAGQFAF 235 (394)
T ss_pred cc-c----------------------------------------------hhHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 012345678888887766555555555555
Q ss_pred HHHh-hHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 012500 265 SYWG-PKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFL 342 (462)
Q Consensus 265 ~~~~-p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (462)
..+. |.+. +..|.++... .......++.+++.++.+++.||.+++ .............+.+....++.+...
T Consensus 236 ~~~~~p~~~-~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~-----~l~~~~~~~~~~~~~l~~~~~~~~~~~ 309 (394)
T PRK10213 236 FTYIRPVYM-NLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKL-----ALAGAPLVLAVSALVLTLWGSDKIVAT 309 (394)
T ss_pred HHHHHHHHH-HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchh-----HHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 5665 5554 5567776554 334566778888999999999985433 333333332333333333344555556
Q ss_pred HHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHH
Q 012500 343 ALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 415 (462)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 415 (462)
....+.+++.+...+.....+.+..| ++++++.+......+ +|..+||.+.|++.|..| +...+...+..
T Consensus 310 ~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-lg~~~G~~l~G~l~~~~g-~~~~~~~~~~~ 379 (394)
T PRK10213 310 GVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQ-LANTCGAAIGGYALDNIG-LTSPLMLSGTL 379 (394)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHH-HHHHHHHHHHHHHHhccC-hhhHHHHHHHH
Confidence 66677777777777767767777776 445666776644444 488999999999999876 44445544433
No 20
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=2.2e-33 Score=261.49 Aligned_cols=345 Identities=14% Similarity=0.128 Sum_probs=248.3
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRML 94 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 94 (462)
+|.+.++ ++.++.+.+. ..+.+.+++.+++++.|++ ||+|||+++..+.++.+++.+++++++|++.+++.|++
T Consensus 26 l~~~~~~---~g~s~~~~g~--~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l 100 (382)
T PRK10091 26 LTELAHD---VGISIPAAGH--MISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLV 100 (382)
T ss_pred hHHHHHH---cCCCHHHHhH--HHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 5544443 7888888555 9999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhcccc
Q 012500 95 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 174 (462)
Q Consensus 95 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 174 (462)
+|++.+...+....++.|++|+++|++++++...+..+|..++|++++.+.+..+||+.|++.+++.++..+..++..||
T Consensus 101 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~ 180 (382)
T PRK10091 101 SGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPD 180 (382)
T ss_pred HHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999988888888999999999999999999999999999999999999998999999999998877766665555565
Q ss_pred ccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHH
Q 012500 175 QLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGY 254 (462)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (462)
.+++ ++.. . .+.. +.++++..+......
T Consensus 181 ~~~~------~~~~------------------------~---------------------~~~~-~~~~~~~~~~~~~~~ 208 (382)
T PRK10091 181 IRDE------AKGG------------------------L---------------------REQF-HFLRSPAPWLIFAAT 208 (382)
T ss_pred CCcc------cccC------------------------H---------------------HHHH-HHhcChHHHHHHHHH
Confidence 3210 0000 0 0011 234566666555544
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHH
Q 012500 255 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 333 (462)
Q Consensus 255 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (462)
.+..........+.+.++.+..|.++... .+.....++.++++++.+++.||++++ +.+.....+..+..+...
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~-----~~~~~~~~~~~i~~~~~~ 283 (382)
T PRK10091 209 MFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPL-----RIAAVTDFIIVLALLMLF 283 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCch-----hHHHHHHHHHHHHHHHHH
Confidence 44444444555667778887778886555 445777888999999999999999987 666555554444433332
Q ss_pred -HhhhhHHHHHHHHHHHHHHHhccccceeeee-ccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHH
Q 012500 334 -CLSSLYGFLALFTVGELLVFATQAPVNYVCL-HSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLA 411 (462)
Q Consensus 334 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~ 411 (462)
..++.+......++.+.+.....++...... +..+++.++.+. .+...+. |..+||.+.|++.|..++|+..+..
T Consensus 284 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-g~~~Gp~~~G~l~~~~~~~~~~~~~ 360 (382)
T PRK10091 284 FFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNL-GSAIGAYCGGMMLTLGLAYNYVALP 360 (382)
T ss_pred HHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHH-HHHHHHHHhHHHHHcccCcchHHHH
Confidence 2233333334444444444333333332233 333445555543 3344454 9999999999999987778888887
Q ss_pred HHHHHHHHHHHHHH
Q 012500 412 LTSIFFLAAGIWFV 425 (462)
Q Consensus 412 ~~~~~~~~~~~~~~ 425 (462)
.+...++...+...
T Consensus 361 ~~~~~~~~~~~~~~ 374 (382)
T PRK10091 361 AALLSFAAMSSLLL 374 (382)
T ss_pred HHHHHHHHHHHHHH
Confidence 77665555554443
No 21
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=8e-34 Score=265.25 Aligned_cols=347 Identities=10% Similarity=-0.019 Sum_probs=256.5
Q ss_pred HHHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHH
Q 012500 13 GLILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAIC 91 (462)
Q Consensus 13 ~~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 91 (462)
+...|.+.++ ++.++.+.+. ..+.+.++..+++++.|++ ||+|||+++..+.++.+++.+++++++|++.++++
T Consensus 23 ~~~~~~~~~~---~~~s~~~~g~--~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (377)
T TIGR00890 23 TLLAPPLGRY---FGVGVTAVAI--WFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLT 97 (377)
T ss_pred hhHHHHHHHH---hCCCHHHHHH--HHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3446644444 7888888655 9999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhc
Q 012500 92 RMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 171 (462)
Q Consensus 92 r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 171 (462)
|++.|++.+...+.....+.|++| |+|+++.++...+.++|..+++++.+.+.+..|||+.|++.++++++..+..+++
T Consensus 98 ~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 176 (377)
T TIGR00890 98 YGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFL 176 (377)
T ss_pred HHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999888888888999997 7899999999999999998887777777778899999999999888877777666
Q ss_pred cccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHH
Q 012500 172 KPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNV 251 (462)
Q Consensus 172 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (462)
.|+++++. +++.. +.+++ ..+.++.++++.++...
T Consensus 177 ~~~~~~~~----~~~~~--------------------~~~~~---------------------~~~~~~~~~~~~~~~~~ 211 (377)
T TIGR00890 177 IGYPPGQL----IKTNI--------------------EVSVK---------------------DYTVWEMLRTPQFWVLY 211 (377)
T ss_pred eecCchhc----cccCc--------------------ccchh---------------------hhhHHHHHcCccHHHHH
Confidence 54422110 00000 00000 01244567788887776
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHH
Q 012500 252 LGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 330 (462)
Q Consensus 252 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (462)
+..++..........+.+.+.++ .+.++... .......+..++++++.|++.||++|| +.+..+..+......
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~ 285 (377)
T TIGR00890 212 LSFFLNAVSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQ-----KTMSIVFGISAVGMA 285 (377)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hhhhHHHHHHHHHHH
Confidence 66665555555555566666554 55665443 445677888899999999999999988 666555555554444
Q ss_pred HHHHhhh--hHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHH
Q 012500 331 TAFCLSS--LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKT 408 (462)
Q Consensus 331 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~ 408 (462)
.....++ ....+....+.+++.+...+..+....+.+|+++|+++.|+.+...+. |..++|.+.|.+.|..| |+..
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-g~~~~~~~~g~l~~~~g-~~~~ 363 (377)
T TIGR00890 286 AMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAV-AGIFGGLIASHALTEIG-FEYT 363 (377)
T ss_pred HHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHH-HHHHHHHHHHHHHhhhc-hhhH
Confidence 4333332 222233344555555555556666778889999999999999766665 99999999999999876 7677
Q ss_pred HHHHHHHHHH
Q 012500 409 TLALTSIFFL 418 (462)
Q Consensus 409 ~~~~~~~~~~ 418 (462)
+...+++.++
T Consensus 364 f~~~~~~~~~ 373 (377)
T TIGR00890 364 FIVTGAFALT 373 (377)
T ss_pred HHHHHHHHHH
Confidence 7666555443
No 22
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=8.4e-34 Score=263.93 Aligned_cols=338 Identities=15% Similarity=0.096 Sum_probs=260.3
Q ss_pred HHHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccc-----hhH
Q 012500 13 GLILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSF-----DFW 86 (462)
Q Consensus 13 ~~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~-----~~~ 86 (462)
...+|.+..+ .+.++.+.+. ..+.+.++..+++++.|++ ||+|||+++..+.++..++.++.++.+ |++
T Consensus 19 ~~~~~~~~~~---~~~s~~~~g~--~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (365)
T TIGR00900 19 QVALPLYVLA---GTGSASVLSL--AALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIW 93 (365)
T ss_pred HHHHHHHHHH---hhccHHHHHH--HHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHH
Confidence 3446765554 5777777555 9999999999999999999 999999999999999999998888887 999
Q ss_pred HHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHH
Q 012500 87 SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAV 166 (462)
Q Consensus 87 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~ 166 (462)
.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|.+++|.+++.+.++.|||+.|++.++..++..+
T Consensus 94 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~ 173 (365)
T TIGR00900 94 QVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISAL 173 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998876655544
Q ss_pred HHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhH
Q 012500 167 LAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKV 246 (462)
Q Consensus 167 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (462)
..+...+++.+. +++ ++. +++ ..++..+..+.++++|.
T Consensus 174 ~~~~~~~~~~~~---~~~-~~~----------------------~~~----------------~~~~~~~~~~~~~~~~~ 211 (365)
T TIGR00900 174 LIVSVRIPELAA---SEI-QAL----------------------SNA----------------VLRDTREGIKFVLKNPL 211 (365)
T ss_pred HHHhcccccCCC---ccc-ccc----------------------chh----------------HHHHHHhHHHHHHcCcH
Confidence 444332211100 000 000 000 00011234667788888
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHH
Q 012500 247 YVVNVLGYIAYNFVIGAYS-YWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL 324 (462)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 324 (462)
++...+..+.......... .+.|.+.++.++.++... .......++.+++.++.+++.||.+++ +.+..+...
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~ 286 (365)
T TIGR00900 212 LRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRM-----ALMTGAIFV 286 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh-----HHHHHHHHH
Confidence 8887777766666665555 788999888788876555 444667788889999999999999987 666555544
Q ss_pred HHHHHHHHHHhhh-hHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhc
Q 012500 325 GAISCLTAFCLSS-LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 403 (462)
Q Consensus 325 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g 403 (462)
...........++ .+...+..++.+++.+...+.......+..|++.|+++.|+.+...+. +..++|.+.|.+.|..|
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 287 IGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHA-AWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC
Confidence 4444444444443 556666677778888777777888889999999999999999766666 88999999999998754
No 23
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=3.3e-33 Score=261.49 Aligned_cols=352 Identities=11% Similarity=0.068 Sum_probs=253.8
Q ss_pred HHHHHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHH
Q 012500 11 LIGLILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIA 89 (462)
Q Consensus 11 ~~~~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~ 89 (462)
..+..+|.+.++ ++.++.+.+. ..+.+.+++.+++++.|++ ||+|||+++..+.++.+++.+++++++|++.++
T Consensus 25 ~~g~~~~~i~~~---~~~s~~~~g~--~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~ 99 (394)
T PRK03699 25 VTGMVMGPIAEY---FNLPVSSMSN--TFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFS 99 (394)
T ss_pred HHhhhhHHHHHH---hCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHH
Confidence 344456765544 7888888665 8999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhc-ccchHHHHHHHHHHHHHHHHHH
Q 012500 90 ICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-HLNWRYAFWGEAILMLPFAVLA 168 (462)
Q Consensus 90 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-~~gwr~~f~~~~~~~~~~~~~~ 168 (462)
+.|+++|++.+...+....++.|++|+++|+++++..+....+|..++|.+.+.+.+ ..+||+.|.+.+++.++..++.
T Consensus 100 ~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK03699 100 IAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILT 179 (394)
T ss_pred HHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998887754 5799999999888776655444
Q ss_pred hhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHH
Q 012500 169 FVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYV 248 (462)
Q Consensus 169 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (462)
++. +.++ +++++.. + + + + . .+. ..++.++
T Consensus 180 ~~~--~~p~----~~~~~~~--~---------~------~---~------~------------------~~~-~~~~~~~ 208 (394)
T PRK03699 180 LFS--EFPA----LGKHAPK--A---------D------K---P------V------------------AKE-KWGIGVL 208 (394)
T ss_pred Hhc--CCcc----ccccCcc--c---------c------C---c------c------------------ccc-cCChHHH
Confidence 322 1110 0000000 0 0 0 0 0 000 0134455
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHH
Q 012500 249 VNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI 327 (462)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 327 (462)
...+..++.......+..|.|.|+++.++.++.+. .+.+...++..+++++.+++.||+++| +.+.....+...
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~-----~~l~~~~~~~~~ 283 (394)
T PRK03699 209 FLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQ-----RILTVLAGLALV 283 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchh-----hHHHHHHHHHHH
Confidence 55555666666677888999999998888886555 445677788899999999999999998 665555544444
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhH
Q 012500 328 SCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRK 407 (462)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 407 (462)
........++.+......++.+++.+..++.......+..+ +.+++..+......+ +|..++|.+.|++.|..| +..
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~-~g~~i~p~~~G~l~~~~g-~~~ 360 (394)
T PRK03699 284 LMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGT-IGTMLTFVVTSPIVAHFG-LQA 360 (394)
T ss_pred HHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhh-HHHHHHHHHHHHHHHHhC-chh
Confidence 44444344444444455556666666555555555455443 445677777755544 599999999999999877 666
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 012500 408 TTLALTSIFFLAAGIWFVG 426 (462)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~ 426 (462)
.++....+.+++.++.+..
T Consensus 361 ~~~~~~~~~~~~~~~~~~~ 379 (394)
T PRK03699 361 ALLTANGLYAVVFVMCILL 379 (394)
T ss_pred hhhhhHHHHHHHHHHHHHH
Confidence 6666666655554444433
No 24
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1.9e-33 Score=270.91 Aligned_cols=378 Identities=13% Similarity=0.064 Sum_probs=236.1
Q ss_pred chhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccch------hHHHHHHHHHhhccccccccccc
Q 012500 35 SSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFD------FWSIAICRMLVGVGEASFISLAA 107 (462)
Q Consensus 35 ~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~g~~~~~~~ 107 (462)
.+++.+.+.++.++++++.|++ ||+|||+++..+.+++.+++++++++++ ++.++++|+++|++.|...+...
T Consensus 58 ~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~ 137 (502)
T TIGR00887 58 SAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSA 137 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 3559999999999999999999 9999999999999999999999998876 78999999999999999999999
Q ss_pred chhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhc-----------------------ccchHHHHHHHHHHHHHH
Q 012500 108 PFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-----------------------HLNWRYAFWGEAILMLPF 164 (462)
Q Consensus 108 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-----------------------~~gwr~~f~~~~~~~~~~ 164 (462)
.++.|++|+++|++++++.+....+|..+++.++..+.. .++||+.|.+.++++++.
T Consensus 138 ~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~ 217 (502)
T TIGR00887 138 IITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLA 217 (502)
T ss_pred HHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988875532 247999998888776554
Q ss_pred HHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhh
Q 012500 165 AVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE 244 (462)
Q Consensus 165 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (462)
.+ ..+.+||++++...++++++...+ ...+....+..++ .++.++.+.++ + .. ..++++++++
T Consensus 218 ~~-~~~~lpESpr~l~~~~~~~~~a~~-~~~~~~~~~~~~~-~~~~~~~~~~~--~-----~~-------~~~~~~l~~~ 280 (502)
T TIGR00887 218 LY-FRLTIPETPRYTADVAKDVEQAAS-DMSAVLQVKIEAE-PDEVEKASTAV--E-----VP-------KASWSDFFTH 280 (502)
T ss_pred HH-HHHhCCCCHHHHHHhCcchHHHHH-HHHHHhccccccC-cccccchhccc--c-----ch-------hhhHHHHHHH
Confidence 44 445669998874332222111000 0001100000000 00000000000 0 00 0123333331
Q ss_pred ---hHH----HHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-------------hhhhhHHHhhhhhhhhhhHHH
Q 012500 245 ---KVY----VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-------------MFGGVTIVCGIVGTISGGFIL 304 (462)
Q Consensus 245 ---~~~----~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~g~l~ 304 (462)
++. .......+......++...|.|.++++ .|.++... ....+..++.+++.++.++++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~ 359 (502)
T TIGR00887 281 FFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLV 359 (502)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111 111222333344555667788888875 45543210 112334456677888999999
Q ss_pred hhhccccccchhHHHHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHH-hccccceeeeeccCCcchhhHHHHHHH
Q 012500 305 DQMGATISNAFKLLSAATFLGAISCLTAFCLS---SLYGFLALFTVGELLVF-ATQAPVNYVCLHSVKPSLRALSMAIST 380 (462)
Q Consensus 305 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (462)
||+||| +.+..+..+..+......... +........++..++.+ ...+....+..|.+|++.|+++.|+.+
T Consensus 360 dr~gRR-----~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~ 434 (502)
T TIGR00887 360 DIIGRK-----PIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISA 434 (502)
T ss_pred hhhcch-----hHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHH
Confidence 999998 666555544443333222211 11111222222222222 233344555678888899999999997
Q ss_pred HHHhhhccccchhHHHHHHhhhc---------chhHHHHHHHHHHHHHHHHHHHHHhhcc-ccccchhh
Q 012500 381 VSIHIFGDVPSSPLVGVLQDHVN---------NWRKTTLALTSIFFLAAGIWFVGIFLKS-IDKFNEDG 439 (462)
Q Consensus 381 ~~~~~~g~~~~~~~~g~l~~~~g---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 439 (462)
...+. +++++|.+.|.+.|..+ ++...+.+++++.+++.+.. .++|| ++++.||+
T Consensus 435 ~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~---~~lpEt~~~~leei 499 (502)
T TIGR00887 435 ASGKA-GAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFT---LLIPETKGKSLEEL 499 (502)
T ss_pred HHhhh-HHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHh---eEeccCCCCCHHhh
Confidence 66665 89999999999988532 12345555555544443332 24455 55544443
No 25
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=8.4e-34 Score=271.60 Aligned_cols=363 Identities=13% Similarity=0.111 Sum_probs=255.7
Q ss_pred ccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhcc--chhHHHHHHHHHhhccccc
Q 012500 25 FLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSS--FDFWSIAICRMLVGVGEAS 101 (462)
Q Consensus 25 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~g~ 101 (462)
+++.+..+.+. +.+.+.+++.+++++.|++ ||+|||+++..+.++++++.+++.++ .+++.+++.|+++|++.+.
T Consensus 70 ~~~~s~~~~g~--~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~ 147 (465)
T TIGR00894 70 NFKWSGALQGL--ILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGS 147 (465)
T ss_pred CCCCCHHHhhH--HHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhccc
Confidence 35666666555 9999999999999999999 99999999999999999999887554 5688899999999999999
Q ss_pred ccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhccc-chHHHHHHHHHHHHHHHHHHhhccccccCCCC
Q 012500 102 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA 180 (462)
Q Consensus 102 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 180 (462)
..|....++.|++|+++|++++++...+..+|.++++++++.+.+.. |||+.|++.++++++..++.+++.||+++..+
T Consensus 148 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~ 227 (465)
T TIGR00894 148 VSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHP 227 (465)
T ss_pred chhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCC
Confidence 99999999999999999999999999999999999999999999884 99999999999887777777666655443211
Q ss_pred CccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHH
Q 012500 181 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV 260 (462)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (462)
. +++++. + .+. +..+++ +++. +...+++++++++.+|...+..++.+..
T Consensus 228 ~-~~~~~~--~----~i~---------~~~~~~----~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (465)
T TIGR00894 228 C-ISKFEK--K----YIN---------SSLQGQ----KGST-----------RQSLPIKAIPKSLPVWAIWFAIFGHFWL 276 (465)
T ss_pred C-CCHHHH--H----HHH---------hhcccc----cCCC-----------CCCCCHHHHhcCHHHHHHHHHHHHHHHH
Confidence 1 000000 0 000 000000 0000 0012467888999999999988888888
Q ss_pred HHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhH----HHHHHHHH-HHHHHHHHH
Q 012500 261 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKL----LSAATFLG-AISCLTAFC 334 (462)
Q Consensus 261 ~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~ 334 (462)
.+.+.+|+|.|+++..+.+.... ...++..++..++.+++|+++||+++|+...++. ........ ....+....
T Consensus 277 ~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (465)
T TIGR00894 277 YTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPY 356 (465)
T ss_pred HHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999888886555 4456778889999999999999987653322221 11111111 111111111
Q ss_pred -hhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhh--cchhHHHHH
Q 012500 335 -LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV--NNWRKTTLA 411 (462)
Q Consensus 335 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~--g~~~~~~~~ 411 (462)
..+.+..+..+++.+.+.+...+..... ..+..++.+|.+.++.+..... +..++|.+.|.+.|.. +.|...+.+
T Consensus 357 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~g~~~g~~~~~~~l-~~~i~p~l~g~~~~~~~~~~~~~~f~~ 434 (465)
T TIGR00894 357 LSAAFYLTIIILTLANAVSSGPLAGVLIN-SLDLAPRFLGFIKGITGLPGFI-GGLIASTLAGNILSQDSKNVWLIVFLI 434 (465)
T ss_pred cCCchHHHHHHHHHHHHHhhhhhhhhhhc-hhhcChhHHHHHHHHHHHHHHH-HHHHHHHhhheeeCCCCchHHHHHHHH
Confidence 1233333344444444444333333333 3344456899999999766665 8889999999888753 446666666
Q ss_pred HHHHHHHHHHH
Q 012500 412 LTSIFFLAAGI 422 (462)
Q Consensus 412 ~~~~~~~~~~~ 422 (462)
.++..+++.++
T Consensus 435 ~~~~~~i~~i~ 445 (465)
T TIGR00894 435 MAFVNILCVIF 445 (465)
T ss_pred HHHHHHHHHHH
Confidence 66555554443
No 26
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=1.3e-33 Score=264.08 Aligned_cols=359 Identities=15% Similarity=0.156 Sum_probs=257.1
Q ss_pred HHHHHHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHH
Q 012500 10 CLIGLILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSI 88 (462)
Q Consensus 10 ~~~~~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l 88 (462)
..++...|.+.++ ++.++.+.+. +.+.+.++..+++++.|++ ||+|||+++..+.++.+++.++.+++++++.+
T Consensus 12 ~~~~~~~~~~~~~---~g~s~~~~g~--~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (379)
T TIGR00881 12 KNFALAMPYLVEE---IGLSKTDLGL--LLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVM 86 (379)
T ss_pred HhhhhhhHHHHHH---hCCCHhHHHH--HHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHH
Confidence 4445557754443 6788888655 9999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhh-hHHHHhhcccchHHHHHHHHHHHHHHHHH
Q 012500 89 AICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGY-VYGGVVGSHLNWRYAFWGEAILMLPFAVL 167 (462)
Q Consensus 89 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~-~~~~~l~~~~gwr~~f~~~~~~~~~~~~~ 167 (462)
++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++ .+++.+.+..+||+.|++.+++.++..++
T Consensus 87 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (379)
T TIGR00881 87 AALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLI 166 (379)
T ss_pred HHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 57777778889999999998888777777
Q ss_pred HhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHH
Q 012500 168 AFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVY 247 (462)
Q Consensus 168 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (462)
.++..||+++..+.++.++... ++.+++ +++ +++. .+......++++++|.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~--~~~---~~~~---------~~~~~~~~~~~~~~~~~ 218 (379)
T TIGR00881 167 CFLLLRDSPQSCGLPPAEEMPN--------------EEPDGD--AEK---KEEE---------LTKKQIFLQYVLLNKVL 218 (379)
T ss_pred HheeeCCCccccccCccccCcc--------------cccccc--ccc---cccc---------ccchHHHHHHHHhcchH
Confidence 7766666543221111100000 000000 000 0000 00011235567888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHH-HHH
Q 012500 248 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT-FLG 325 (462)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~-~~~ 325 (462)
+...+..++..........+.|.|+++..+.++... .......++.+++.++.+++.||..++++ ....... ...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~---~~~~~~~~~~~ 295 (379)
T TIGR00881 219 WYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRR---GPLAVFFMALI 295 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcc---hHHHHHHHHHH
Confidence 888888888888888888999999998888886555 44567778889999999999998654321 2221111 111
Q ss_pred HHHHHHHHH--hhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhc
Q 012500 326 AISCLTAFC--LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 403 (462)
Q Consensus 326 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g 403 (462)
......... ..+.+.......+.++......+.......+..|++.|+++.|+.+...+. |..++|.+.|.+.|..|
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~~~g 374 (379)
T TIGR00881 296 IVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYL-GGILAGLPLGYLADGFG 374 (379)
T ss_pred HHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhh-hhhhhhhhHHHHHHhhc
Confidence 111111111 123333333344444444344444455677888999999999999766665 88899999999999876
Q ss_pred chh
Q 012500 404 NWR 406 (462)
Q Consensus 404 ~~~ 406 (462)
|+
T Consensus 375 -~~ 376 (379)
T TIGR00881 375 -WA 376 (379)
T ss_pred -cc
Confidence 44
No 27
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=5.1e-33 Score=262.50 Aligned_cols=342 Identities=10% Similarity=-0.008 Sum_probs=247.1
Q ss_pred HhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhc-----cchhHHH
Q 012500 15 ILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGS-----SFDFWSI 88 (462)
Q Consensus 15 ~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~l 88 (462)
.+|.+.++ ++.++.+.+. ..+.+.++..+++++.|++ ||+|||+++..+.++.+++.+..+. .++++.+
T Consensus 39 ~~~~~~~~---~~~s~~~~g~--~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (417)
T PRK10489 39 AVPVQIQM---MTGSTLQVGL--SVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAI 113 (417)
T ss_pred HHHHHHHH---HHCCHHHHHH--HHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHH
Confidence 36655554 5667767555 9999999999999999999 9999999999988888777665442 5688999
Q ss_pred HHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHH
Q 012500 89 AICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLA 168 (462)
Q Consensus 89 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 168 (462)
++.|+++|++.+...+...+++.|++|+++|+++.++.....++|..+||.+++.+.+..+||+.|++.++..++..++.
T Consensus 114 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (417)
T PRK10489 114 YLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPL 193 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888899999999999999999999999999999999999999988899999998877766554443
Q ss_pred hhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHH
Q 012500 169 FVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYV 248 (462)
Q Consensus 169 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (462)
+..|+++++. ++ ++. ..++..+.++.++++|.++
T Consensus 194 -~~l~~~~~~~---~~-~~~-----------------------------------------~~~~~~~~~~~~~~~~~~~ 227 (417)
T PRK10489 194 -LRLPALPPPP---QP-REH-----------------------------------------PLRSLLAGFRFLLASPVVG 227 (417)
T ss_pred -HhCCCCCCCC---cc-ccc-----------------------------------------chHHHHHHHHHHHcChHHH
Confidence 3335432110 00 000 0001122355667777776
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHH
Q 012500 249 VNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI 327 (462)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 327 (462)
...+..++... ......+.|.|.++..|.++... .+.....++.+++.++.+++.||.+++ +.+..+..+...
T Consensus 228 ~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~-----~~l~~~~~~~~~ 301 (417)
T PRK10489 228 GIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPG-----LLMLLSTLGSFL 301 (417)
T ss_pred HHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc-----hHHHHHHHHHHH
Confidence 65554443332 34567788999998788876554 344667788888999999999986554 455544444444
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhH
Q 012500 328 SCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRK 407 (462)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 407 (462)
........++.+...+..++.+++.+...+...+...+..|++.|++++|+.+...+. |..++|.+.|++.|..|. ..
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~~g~~l~G~l~~~~g~-~~ 379 (417)
T PRK10489 302 AVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVT-GDAIGAALLGGLGAMMTP-VA 379 (417)
T ss_pred HHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhh-hHhHHHHHHHHHHHHhch-hh
Confidence 4444444455555555666666666655555567778888889999999999655555 999999999999998773 34
Q ss_pred HHHHHHHH
Q 012500 408 TTLALTSI 415 (462)
Q Consensus 408 ~~~~~~~~ 415 (462)
.+...+.+
T Consensus 380 ~~~~~~~~ 387 (417)
T PRK10489 380 SASASGFG 387 (417)
T ss_pred HHHHHHHH
Confidence 45444444
No 28
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-32 Score=236.86 Aligned_cols=342 Identities=15% Similarity=0.092 Sum_probs=278.9
Q ss_pred cccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchh---HHHHHHHHHhhccc
Q 012500 24 KFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDF---WSIAICRMLVGVGE 99 (462)
Q Consensus 24 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~---~~l~~~r~l~G~~~ 99 (462)
.++++|+.|.+. +.+...+...+.-++.|.+ ||+|.|++...++++..+..+..+++.++ +++++.+.+.|++.
T Consensus 42 ~~~~LS~~q~~l--l~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~G 119 (417)
T COG2223 42 SDFGLSEGQKGL--LVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAG 119 (417)
T ss_pred cccCCCHHHHHH--HHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhccc
Confidence 448999999766 9999999999999999999 99999999999999999999999998654 59999999999987
Q ss_pred ccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccc---hHHHHHHHHHHHHHHHHHHhhcccccc
Q 012500 100 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN---WRYAFWGEAILMLPFAVLAFVIKPLQL 176 (462)
Q Consensus 100 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g---wr~~f~~~~~~~~~~~~~~~~~~p~~~ 176 (462)
+ .+......+++|+||+++|.++|++. ..|+|..+...++..+....+ ||.+..+..+..++..+..++...+.+
T Consensus 120 a-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p 197 (417)
T COG2223 120 A-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVP 197 (417)
T ss_pred c-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCh
Confidence 7 67788999999999999999999999 899999999999999998888 999999999888888888888775433
Q ss_pred CCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHH
Q 012500 177 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA 256 (462)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (462)
..+...++.. ...++.++++++.|.+.+.++.
T Consensus 198 ~~r~~~~~~~------------------------------------------------~~~~~~v~~~~~~W~lsllY~~ 229 (417)
T COG2223 198 EHRASVKPQL------------------------------------------------PAQLKAVFSNKDTWLLSLLYFA 229 (417)
T ss_pred hhhccccccc------------------------------------------------hhHHHHHhcCcchHHHHHHHHH
Confidence 2211111000 0246778899999999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHh
Q 012500 257 YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL 335 (462)
Q Consensus 257 ~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (462)
....+.++..++|.|++++++.++... .+.....+.+.+.++++|+++||+|.+ +.+......++++.......
T Consensus 230 tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~-----rv~~~~f~~~~~~~~~l~~~ 304 (417)
T COG2223 230 TFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGR-----RVTLAVFVGMALAAALLSLF 304 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccch-----hHHHHHHHHHHHHHHHHHcc
Confidence 999999999999999999999998766 555677778888999999999999988 66665555555544444333
Q ss_pred -------hhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHH
Q 012500 336 -------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKT 408 (462)
Q Consensus 336 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~ 408 (462)
.+.......+...+++.+......+..+...++ ++.|.+.|+.. ..+.+|+..-|...|...|.+|++...
T Consensus 305 ~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vg-a~G~lGGf~lp~~~g~~~~~tg~~~~~ 382 (417)
T COG2223 305 LTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVG-AIGGLGGFFLPLAFGVSLDLTGSYTGA 382 (417)
T ss_pred ccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHH-HhccccccchhHHHHHHHHhcccHHHH
Confidence 344555565666777788888888888877764 46888999994 555559999999999999999989888
Q ss_pred HHHHHHHHHHHHHHHH
Q 012500 409 TLALTSIFFLAAGIWF 424 (462)
Q Consensus 409 ~~~~~~~~~~~~~~~~ 424 (462)
++++..+.+++.+...
T Consensus 383 f~~~~~~~~~a~v~~~ 398 (417)
T COG2223 383 FMLLLAFYLVALVLTW 398 (417)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888877666655444
No 29
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=6.1e-33 Score=263.22 Aligned_cols=340 Identities=13% Similarity=0.071 Sum_probs=234.0
Q ss_pred HHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHH
Q 012500 14 LILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICR 92 (462)
Q Consensus 14 ~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r 92 (462)
+..|.+.++ ++.++.+.+. ..+.+.++..+++++.|++ ||+|||+++..+.++.+++.++++++++++.++++|
T Consensus 39 ~~~~~i~~~---~~~s~~~~~~--~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r 113 (426)
T PRK12307 39 YIMYLIKAD---LGLTDMEGAF--LATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSR 113 (426)
T ss_pred HHHHHHHHH---hCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 335544333 7888888655 9999999999999999999 999999999999999999999999999999999999
Q ss_pred HHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhcc
Q 012500 93 MLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 172 (462)
Q Consensus 93 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 172 (462)
+++|++.+...+....++.|++|+|+|++++++...+..+|.++++.+.+.+.+..+||+.|++..+..++ .+......
T Consensus 114 ~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~-~~~~~~~~ 192 (426)
T PRK12307 114 FIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLL-VIYIRARA 192 (426)
T ss_pred HHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHH-HHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999989999999985443222 11111111
Q ss_pred ccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHH
Q 012500 173 PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL 252 (462)
Q Consensus 173 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (462)
||++++. +++.. +.++ +. + +.+++...+.+++++++.++....
T Consensus 193 p~~~~~~----~~~~~----------~~~~---------~~------~--------~~~~~~~~~~~~~~~~~~~~~~~~ 235 (426)
T PRK12307 193 PESKEWE----EAKLS----------GKGK---------HS------Q--------SAWSVFSLSMKGLFNRAQFPLTLC 235 (426)
T ss_pred CCChHHH----Hhhhh----------cccc---------cc------c--------cchhhhhHHHHHHHhhchHHHHHH
Confidence 3221100 00000 0000 00 0 000001124566777777765443
Q ss_pred HHHH---HHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHH
Q 012500 253 GYIA---YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS 328 (462)
Q Consensus 253 ~~~~---~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 328 (462)
.... ..........++|.|+++. +.++... .......++.+++.++.|++.||++|| +....+..+....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~-----~~~~~~~~~~~~~ 309 (426)
T PRK12307 236 VFIVLFSIFGANWPIFGLLPTYLAGE-GFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLK-----KTFSIGLLMSFLF 309 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHHHH
Confidence 3222 2222334567889888874 6665444 344667788899999999999999988 6665555444443
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHH--HhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhc
Q 012500 329 CLTAFCLSSLYGFLALFTVGELLV--FATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 403 (462)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g 403 (462)
.+.....++........++.+.+. ....+..+..+.+.+|++.|+++.|+.+...+. ++.++|.+.|++.|..|
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-~~~~gp~~~g~l~~~~g 385 (426)
T PRK12307 310 IFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAAT-SGTFNSMAATWLGITMG 385 (426)
T ss_pred HHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhH-HHHHHHHHHHHHHHccc
Confidence 333322222111222222222221 122233445667889999999999999666666 88999999999999876
No 30
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=5.3e-33 Score=262.28 Aligned_cols=362 Identities=11% Similarity=0.064 Sum_probs=247.1
Q ss_pred HHHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHH
Q 012500 13 GLILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAIC 91 (462)
Q Consensus 13 ~~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 91 (462)
+.+.|.+.++ ++.++.+.+. ..+.+.++..+++++.|.+ ||+|||+++..+.++.+++.++++++++++.+++.
T Consensus 32 ~~~~~~l~~~---~~~s~~~~g~--~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 106 (405)
T TIGR00891 32 ALVLAEVAGE---FGLTTVDAAS--LISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIA 106 (405)
T ss_pred HHHHHHHHHH---hCCChhhHHH--HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 3445644443 7888888655 9999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccc--hHHHHHHHHHHHHHHHHHHh
Q 012500 92 RMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN--WRYAFWGEAILMLPFAVLAF 169 (462)
Q Consensus 92 r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g--wr~~f~~~~~~~~~~~~~~~ 169 (462)
|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++++.+++.+.+..+ ||+.|++.++..++. ++..
T Consensus 107 ~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~-~~~~ 185 (405)
T TIGR00891 107 RLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA-LWLR 185 (405)
T ss_pred HHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH-HHHH
Confidence 9999999999999999999999999999999999999999999999999999888766 999999876554443 3333
Q ss_pred hccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhh-h-hHH
Q 012500 170 VIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQ-E-KVY 247 (462)
Q Consensus 170 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~ 247 (462)
...||++++.+++++++.. .+..++...+++..+ ...++.....++..+ + +.+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 240 (405)
T TIGR00891 186 KNIPEAEDWKEKHAGKALV------------------RTMVDILYGGEHRIA-------NIVMTLAAAMVQSAGKRWPTF 240 (405)
T ss_pred HhCCCChhHHHHhhhhhhh------------------hhHHHHHhccchhhh-------hhhhhhhHHhhhhhhhhhHHH
Confidence 3445543211000000000 000000000000000 000000011111111 1 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHH
Q 012500 248 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 326 (462)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 326 (462)
..........+........+.|.|+.+..+.++.+. .+.....++.+++.++.+++.||++|| +.+........
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~-----~~~~~~~~~~~ 315 (405)
T TIGR00891 241 VYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRR-----KAYVCSLLAGQ 315 (405)
T ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----hhhHHHHHHHH
Confidence 222233333344455666788999988888886555 445677888899999999999999998 65555544432
Q ss_pred HHHH-HHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcch
Q 012500 327 ISCL-TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNW 405 (462)
Q Consensus 327 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~ 405 (462)
.... .....++.+......++.+++.....+.....+.+..|++.|+++.|+.+...+. |..++|.+.|.+.|+.|+|
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-g~~~g~~~~g~l~~~~g~~ 394 (405)
T TIGR00891 316 LLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNL-GGALAPIIGALLAQRLDEY 394 (405)
T ss_pred HHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHH-HHHHHHHHHHHHHHhcccc
Confidence 2222 2222233333344434555555555666677888889999999999999766665 8899999999999998877
Q ss_pred hHHHHH
Q 012500 406 RKTTLA 411 (462)
Q Consensus 406 ~~~~~~ 411 (462)
...+..
T Consensus 395 ~~~~~~ 400 (405)
T TIGR00891 395 GTALAS 400 (405)
T ss_pred chhHHh
Confidence 554443
No 31
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=4.3e-33 Score=267.57 Aligned_cols=367 Identities=13% Similarity=0.060 Sum_probs=263.8
Q ss_pred HHHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHH
Q 012500 13 GLILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAIC 91 (462)
Q Consensus 13 ~~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 91 (462)
+..+|.+.++ ++.+..+. +|..+.|.++..++.++.|++ ||+|||+++..+.+++.++++++++++|++.++++
T Consensus 26 ~~a~p~i~~~---l~~s~~~~--~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~ 100 (495)
T PRK14995 26 HVAAPTLSMT---LGASGNEL--LWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIAT 100 (495)
T ss_pred HHHHHHHHHH---hCCCHhHH--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 3346766555 78777774 459999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHhhcccccccccccchhcccC-CCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhh
Q 012500 92 RMLVGVGEASFISLAAPFIDDNA-PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 170 (462)
Q Consensus 92 r~l~G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 170 (462)
|+++|+|.+...+.....+.+++ |+++|+++++++.....+|..+||.+++.+.++.|||+.|++...++++..++.++
T Consensus 101 r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~ 180 (495)
T PRK14995 101 RALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTAR 180 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888888887766 67899999999999999999999999999999999999999998887777777777
Q ss_pred ccccccCCCCCcccccccccccc-------ccccccccccccccccccc--------hhhhhhhhccccccchhhhhcch
Q 012500 171 IKPLQLKGFAPAESGKAQVVASV-------SEGSEASNLNDHVSEDISD--------QASERSIKSIGESRFLNQLSQFS 235 (462)
Q Consensus 171 ~~p~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 235 (462)
..|+++++. +++.+....... .....+...+......... .......+.+.+ +..
T Consensus 181 ~l~~~~~~~--~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~--------~p~ 250 (495)
T PRK14995 181 YVPRQAGRR--DQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAAS--------RPM 250 (495)
T ss_pred hCCCCCCCC--CCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCC--------CCC
Confidence 767643211 110000000000 0000000000000000000 000000000000 111
Q ss_pred hhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccc
Q 012500 236 QDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNA 314 (462)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 314 (462)
.+ .+++|+|.+....+..++......+...+.|.|+++.+|.++... .......++..++.++.|++.||+++|
T Consensus 251 ~~-~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~---- 325 (495)
T PRK14995 251 ID-MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLR---- 325 (495)
T ss_pred cC-HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch----
Confidence 12 357888888887777777777777888899999999999997666 444666788889999999999999987
Q ss_pred hhHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccc
Q 012500 315 FKLLSAATFLGAISCLTAFCL---SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPS 391 (462)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 391 (462)
+.+..+..+........... ++.+......++.+++.+...++......+..|+++++.+.++.++..+. |..+|
T Consensus 326 -~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l-G~~~G 403 (495)
T PRK14995 326 -LVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYEL-GAGLG 403 (495)
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHH-HHHHH
Confidence 66655554444433322221 23444555677778888887777788888889999999999999766666 98999
Q ss_pred hhHHHHHHhh
Q 012500 392 SPLVGVLQDH 401 (462)
Q Consensus 392 ~~~~g~l~~~ 401 (462)
+.+.|.+.++
T Consensus 404 ~ai~g~i~~~ 413 (495)
T PRK14995 404 IAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHHH
Confidence 9999998774
No 32
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=1.9e-32 Score=257.77 Aligned_cols=327 Identities=12% Similarity=0.005 Sum_probs=245.9
Q ss_pred ccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhccccccc
Q 012500 25 FLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI 103 (462)
Q Consensus 25 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~ 103 (462)
+++.++.+.+. ..+.+.+++.+++++.|++ ||+|||+++..+..+.+++.+.+.++++++.+++.|+++|++.+...
T Consensus 42 ~~~~s~~~~~~--~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~ 119 (406)
T PRK15402 42 DFNAGAEWVPT--SMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIG 119 (406)
T ss_pred HhCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHH
Confidence 37788877555 8899999999999999999 99999999999999999999999999999999999999999999888
Q ss_pred ccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCcc
Q 012500 104 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAE 183 (462)
Q Consensus 104 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 183 (462)
+...+++.|++|+++|++++++......+|..++|.+++.+.++.+||+.|++.++..++..+..++..||+++..+ +
T Consensus 120 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 197 (406)
T PRK15402 120 AVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVG--E 197 (406)
T ss_pred HHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCcccc--c
Confidence 88899999999999999999999988889999999999999998999999999988877776665555565421100 0
Q ss_pred ccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHH
Q 012500 184 SGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGA 263 (462)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (462)
+ . +.++..+++++++++|.++...+...+.......
T Consensus 198 --~-~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (406)
T PRK15402 198 --K-L-----------------------------------------SLKELGRDYKLVLKNRRFVAGALALGLVSLPLLA 233 (406)
T ss_pred --c-c-----------------------------------------cHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHH
Confidence 0 0 0001123466788899888877766666665666
Q ss_pred HHHHhhHHHHHHhCCCcchhhh-hhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHh-----hh
Q 012500 264 YSYWGPKAGYNIYHMSNADMMF-GGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL-----SS 337 (462)
Q Consensus 264 ~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 337 (462)
...+.|.++.+.++.++..... .....++.+++.++.+++.||+++| +.+..+..+........... ++
T Consensus 234 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~ 308 (406)
T PRK15402 234 WIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLR-----SLIRMGLWPMVAGLLLAALATVISSHA 308 (406)
T ss_pred HHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 6677898888888888655432 3445567788999999999999987 66555544433332222211 23
Q ss_pred hHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchh
Q 012500 338 LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR 406 (462)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 406 (462)
.+.......+.+++.+...+....... ..+++++++..+..+..... +..+|+.+.+.+.+..+.+.
T Consensus 309 ~~~~~~~~~~~g~g~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~-~~~~g~~~~~~l~~~~~~~~ 375 (406)
T PRK15402 309 YLWLTAGLSLYAFGIGLANAGLYRLTL-FSSDVSKGTVSAAMGMLSML-IFTVGIELSKHAYLGGGNGL 375 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHh-hhccccccHHHHHHHHHHHH-HHHHHHHHHHhcccCCchHH
Confidence 334445556666666655555444433 33458899999999765555 88899999999988877443
No 33
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=4.4e-32 Score=256.89 Aligned_cols=339 Identities=14% Similarity=0.101 Sum_probs=222.3
Q ss_pred HHHHHHhhhhhhhccccccccccccch----hhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccch
Q 012500 10 CLIGLILKRSMKKKKFLSLRKLAAGSS----VNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFD 84 (462)
Q Consensus 10 ~~~~~~~p~~~~~~~~~~~~~~~~~~s----~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 84 (462)
..++...|.+.++ ++.++.+.+.- .......++..+++++.|++ ||+|||++++.+.++++++++++++++|
T Consensus 32 ~~~~~~~~~i~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~ 108 (434)
T PRK15075 32 FLFGFYATAIAKT---FFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPG 108 (434)
T ss_pred HHHHHHHHHHHHH---hCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCc
Confidence 4456667855554 56666554320 11122233345788999999 9999999999999999999999999999
Q ss_pred hHH--------HHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhh--------ccc
Q 012500 85 FWS--------IAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG--------SHL 148 (462)
Q Consensus 85 ~~~--------l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~--------~~~ 148 (462)
++. ++++|+++|++.+...+....+++|++|+++|++++++...+.++|..+++.+++.+. +.+
T Consensus 109 ~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~ 188 (434)
T PRK15075 109 YATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEW 188 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhcc
Confidence 874 6889999999999999989999999999999999999999988888888888777653 467
Q ss_pred chHHHHHHHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccch
Q 012500 149 NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFL 228 (462)
Q Consensus 149 gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (462)
|||++|++..+.. +. .+ +.++.+ +|+++...++ ++.
T Consensus 189 gWr~~f~~~~~~~-~~---~~-~~~~~~-----~e~~~~~~~~---------------------------~~~------- 224 (434)
T PRK15075 189 GWRIPFLIGCLIV-PF---IF-LIRRSL-----EETEEFLARK---------------------------HRP------- 224 (434)
T ss_pred chHHHHHHHHHHH-HH---HH-HHHHhc-----CCCHHHHHhh---------------------------hcc-------
Confidence 9999999754332 11 11 111111 1110000000 000
Q ss_pred hhhhcchhhHHHHhhhhHHHHHH-HHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhh
Q 012500 229 NQLSQFSQDTKVLLQEKVYVVNV-LGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ 306 (462)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~ 306 (462)
.. .+.++...+++..+... ...++.....+....|.|.|+++..|.+..+. .......++++++.++.|+++||
T Consensus 225 -~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr 300 (434)
T PRK15075 225 -SM---REIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDR 300 (434)
T ss_pred -cc---ccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 01122333444444332 22334455566788899999998888886554 34456778888999999999999
Q ss_pred hccccccchhHHHHHHHHHHHHHH-HH-HH-h-hhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHH
Q 012500 307 MGATISNAFKLLSAATFLGAISCL-TA-FC-L-SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVS 382 (462)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (462)
++|| +.......+...... .. .. . ++.........+.+++.+...+.......|..|++.|+++.++.+..
T Consensus 301 ~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~ 375 (434)
T PRK15075 301 IGRR-----PVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSL 375 (434)
T ss_pred hcch-----HHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHH
Confidence 9998 555444333222111 11 11 1 12222222233334445444444556678889999999999997555
Q ss_pred HhhhccccchhHHHHHHhhhcc
Q 012500 383 IHIFGDVPSSPLVGVLQDHVNN 404 (462)
Q Consensus 383 ~~~~g~~~~~~~~g~l~~~~g~ 404 (462)
.+.+++.++|.+.|++.|+.|.
T Consensus 376 ~~~~~g~~~p~~~g~i~~~~g~ 397 (434)
T PRK15075 376 ATAIFGGFTPAISTWLIHVTGD 397 (434)
T ss_pred HHHHHhhhHHHHHHHHHHhcCC
Confidence 5554567899999999998873
No 34
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.8e-33 Score=257.26 Aligned_cols=343 Identities=17% Similarity=0.134 Sum_probs=245.7
Q ss_pred hhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHh
Q 012500 17 KRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLV 95 (462)
Q Consensus 17 p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 95 (462)
+.+....++.+....+++. ..+++.++++++.++++.+ ||++..+.+....+++++-.++....+|++.+++.|++.
T Consensus 67 a~l~g~~edl~~~~~~l~~--~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~ll 144 (495)
T KOG2533|consen 67 ASLSGLKEDLKLVGNQLGV--LDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLL 144 (495)
T ss_pred HHHcCCccccchhhhhhhh--HHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 3344444456777777666 9999999999999999999 999999999999999999999998999999999999999
Q ss_pred hcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhh------cccchHHHHHHHHHHHHHHHHHHh
Q 012500 96 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG------SHLNWRYAFWGEAILMLPFAVLAF 169 (462)
Q Consensus 96 G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~------~~~gwr~~f~~~~~~~~~~~~~~~ 169 (462)
|+.++..+|....+++.|+.++||++.++++.++.++|.++|.+++..+. ...||||.|++.|+++++.+++.+
T Consensus 145 Gl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f 224 (495)
T KOG2533|consen 145 GLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVF 224 (495)
T ss_pred HHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEE
Confidence 99999999999999999999999999999999999999999999998863 457999999999999999999999
Q ss_pred hccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHH
Q 012500 170 VIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVV 249 (462)
Q Consensus 170 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (462)
+++|+.|.+..-.+++++.... ++.++.+.+... + +..+..+++.+++|.+|.
T Consensus 225 ~~lp~~P~~~~fl~~~ek~~~~--------------------~~~~~~~~~~~~-----~--~~~~~~~~~a~~dp~vw~ 277 (495)
T KOG2533|consen 225 FFLPDNPSKAWFLTDEEKELVV--------------------ERLRESPSGGIE-----N--KFKWKGFKEALKDPGVWP 277 (495)
T ss_pred EEecCChhhccccchHHHHHHH--------------------HHHHhccCCCcc-----c--ccCHHHHHHHHhchhHHH
Confidence 9999876532111111100000 000000000000 0 011356889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhc----cccccchhHHHHHH-H
Q 012500 250 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMG----ATISNAFKLLSAAT-F 323 (462)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~----~~~~~~~~~~~~~~-~ 323 (462)
..+..++.....+++.+|+|.++.+..+.+..+. .+.....++++++.+++|+++||+. +| ....... +
T Consensus 278 ~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~-----~~~~~~~~~ 352 (495)
T KOG2533|consen 278 FSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARR-----LLFIVFLCL 352 (495)
T ss_pred HHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHH-----HHHHHHHHH
Confidence 9999999999999999999999999666775555 6668889999999999999999953 33 3333333 2
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhh-HHHHHHHHHHhhhccccchhH
Q 012500 324 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRA-LSMAISTVSIHIFGDVPSSPL 394 (462)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~ 394 (462)
.................................+.......+...++.|. +..++.....+. +++++|.+
T Consensus 353 ~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s-~~~~~~~~ 423 (495)
T KOG2533|consen 353 YAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGS-AGAISGQL 423 (495)
T ss_pred HHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhH-HHHhhhhh
Confidence 33333233333333343443344444444455555555666666664443 333333333344 44444433
No 35
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=9.8e-32 Score=252.58 Aligned_cols=339 Identities=13% Similarity=0.068 Sum_probs=239.2
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhcc--------chhH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSS--------FDFW 86 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~--------~~~~ 86 (462)
+|..++++ ++.++.+.+. ..+.+.++..+++++.|++ ||+|||+++..+.++.+++.+.+.++ .+++
T Consensus 38 l~~~i~~~--~g~s~~~~g~--~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (399)
T PRK05122 38 LPGYVHDQ--LGFSAFLAGL--VISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLL 113 (399)
T ss_pred HHHHHHHh--cCccHHHHHH--HHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHH
Confidence 45444333 6778887555 9999999999999999999 99999999999999988877766543 2577
Q ss_pred HHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHH
Q 012500 87 SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAV 166 (462)
Q Consensus 87 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~ 166 (462)
.+++.|+++|++.+...+....++.|++|+++|++++++.+.+..+|.++|+.+++.+.++.|||+.+++..+..++..+
T Consensus 114 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~ 193 (399)
T PRK05122 114 LLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLL 193 (399)
T ss_pred HHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999998887665433222
Q ss_pred HHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhH
Q 012500 167 LAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKV 246 (462)
Q Consensus 167 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (462)
.. ...|+.+ +++++ . .+.++.+++
T Consensus 194 ~~-~~~~~~~-----~~~~~-~-----------------------------------------------~~~~~~~~~-- 217 (399)
T PRK05122 194 LA-RPRPAVP-----PVKGE-R-----------------------------------------------LPFRRVLGR-- 217 (399)
T ss_pred HH-hcCCCCC-----CCCcc-c-----------------------------------------------hhHHHHHHH--
Confidence 11 1111110 00000 0 001111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchhhhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHH
Q 012500 247 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 326 (462)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 326 (462)
.+.......+..........+.|.|+.+. +.+... .......++.+++.++.+++.||+++| +.+.....+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~g~l~~r~~~~-----~~~~~~~~~~~ 290 (399)
T PRK05122 218 VWPYGMGLALASIGFGTIATFITLYYAAR-GWDGAA-LALTLFGVAFVGARLLFGNLINRLGGL-----RVAIVSLLVEI 290 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ccccch-HHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHH
Confidence 11111222233344455667778777653 443222 233556777888999999999999987 66655555555
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchh
Q 012500 327 ISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR 406 (462)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 406 (462)
.........++.+..+....+.+++.+..++.......+..|+++|+++.|+.+...+. |..++|.+.|.+.|..| ++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~~~g-~~ 368 (399)
T PRK05122 291 LGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDL-SLGITGPLAGLVASWFG-YP 368 (399)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC-HH
Confidence 54444444555555566666777777766666666667888899999999999766666 87888889999999876 77
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012500 407 KTTLALTSIFFLAAGIW 423 (462)
Q Consensus 407 ~~~~~~~~~~~~~~~~~ 423 (462)
..+...+.+.+++.++.
T Consensus 369 ~~~~~~~~~~~~~~~~~ 385 (399)
T PRK05122 369 SIFLAAALAALLGLALT 385 (399)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 77777666655544433
No 36
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=6.2e-33 Score=268.76 Aligned_cols=366 Identities=13% Similarity=0.061 Sum_probs=244.9
Q ss_pred cccc---cccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhccccc
Q 012500 26 LSLR---KLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEAS 101 (462)
Q Consensus 26 ~~~~---~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 101 (462)
++.+ +.+. ++..+.+.++.++++++.|++ ||+|||+++..+.++.+++.++.++++|++.+++.|++.|++.+.
T Consensus 119 ~~l~c~~~~~~--~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~ 196 (505)
T TIGR00898 119 WDLVCEDAWKV--DLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGG 196 (505)
T ss_pred ecceechHHHH--HHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccc
Confidence 5555 5554 459999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred ccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccccccCCCCC
Q 012500 102 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAP 181 (462)
Q Consensus 102 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~ 181 (462)
..+....++.|++|+++|+++.++.+.+..+|.++++.++..+.+ ||+.|++.+++.++..+.. ++.||++++...
T Consensus 197 ~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~~esp~~l~~ 272 (505)
T TIGR00898 197 IWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFVPESPRWLIS 272 (505)
T ss_pred hHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-HhcCCChHHHHH
Confidence 999999999999999999999999999999999999998877654 9999999998877666655 566887765432
Q ss_pred ccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHH
Q 012500 182 AESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVI 261 (462)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (462)
+++.++. .+...+..+.+......+....+.+++..++ ....+.++++++|.++...+......+..
T Consensus 273 ~~~~~~a--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 339 (505)
T TIGR00898 273 QGRIEEA--LKILQRIAKINGKKLPAEVLSLSLEKDLSSS-----------KKQYSFLDLFRTPNLRKTTLCLMMLWFTT 339 (505)
T ss_pred CCCHHHH--HHHHHHHHHHcCCCCCHHHHhhhhhhhhhhc-----------cCCCcHHHHhCChHHHHHHHHHHHHHHHH
Confidence 2221111 0000010000000000000000000000000 00124677888888877665544433332
Q ss_pred HHHHHHhhHHHHHHhCCCcchhhhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhh--H
Q 012500 262 GAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL--Y 339 (462)
Q Consensus 262 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 339 (462)
....+..+.+.. ..+.+ .........+..+++.++.+++.||+||| +.+....++.++.++.....++. +
T Consensus 340 ~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~i~~~~~~~~l~dr~grr-----~~~~~~~~~~~~~~l~~~~~~~~~~~ 411 (505)
T TIGR00898 340 AFSYYGLVLDLG-NLGGN--IYLDLFISGLVELPAKLITLLLIDRLGRR-----YTMAASLLLAGVALLLLLFVPVDLYF 411 (505)
T ss_pred HHHHHHHhcccc-ccCCC--hHHHHHHHHHHHHHHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHHHHHHHcCCCchH
Confidence 222222222222 22323 22223455677788999999999999998 77766666655555544444332 3
Q ss_pred HHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHHHHH
Q 012500 340 GFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLA 419 (462)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 419 (462)
......++.+++....++..+.+..|.+|++.|+++.|+.+..... |++++|.+.+ +.+ .+ ....+.+.++..+++
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~i-g~~i~p~i~~-~~~-~~-~~~~~~~~~~~~~~~ 487 (505)
T TIGR00898 412 LRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARV-GSIISPFLVY-LGE-KW-LFLPLVLFGGLALLA 487 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHH-HHHHHhHHHH-HHH-HH-HhhHHHHHHHHHHHH
Confidence 3444455555666666677778888999999999999999766555 9999998888 443 23 334555555554444
Q ss_pred HHH
Q 012500 420 AGI 422 (462)
Q Consensus 420 ~~~ 422 (462)
.++
T Consensus 488 ~~~ 490 (505)
T TIGR00898 488 GIL 490 (505)
T ss_pred HHH
Confidence 433
No 37
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=7.7e-32 Score=251.56 Aligned_cols=346 Identities=11% Similarity=0.050 Sum_probs=244.8
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHH-HHHHHHHHHHHhhhccchhHHHHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIG-VGLSVWTFATAGCGSSFDFWSIAICRM 93 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~-~~~~~~~~~~~~~~~~~~~~~l~~~r~ 93 (462)
+|.+++++ ++.++.+.+. ..+.+.++..+.+++.|++ ||+||||.++ .+.++..++.+++++++|++.+++.|+
T Consensus 20 l~~~l~~~--~g~s~~~~g~--~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 95 (375)
T TIGR00899 20 LSLFLSEE--VRARPAMIGL--FYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGV 95 (375)
T ss_pred HHHHHHcc--cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 44444333 6788888655 9999999999999999999 9999998755 466666778888899999999999999
Q ss_pred HhhcccccccccccchhcccCCCCCchhH--HHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhc
Q 012500 94 LVGVGEASFISLAAPFIDDNAPVPQKTAW--LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 171 (462)
Q Consensus 94 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 171 (462)
++|.+.+...|...++..|+.|+++|++. .+....+.++|.++||.+++.+.+..+||+.|++.+++.++..+..++.
T Consensus 96 ~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~ 175 (375)
T TIGR00899 96 LLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLF 175 (375)
T ss_pred HHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh
Confidence 99988888888888889999887777654 6788888899999999999999999999999999998877777777766
Q ss_pred cccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHH
Q 012500 172 KPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNV 251 (462)
Q Consensus 172 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (462)
.||.+++.++ +++ . .+.++.++++.++...
T Consensus 176 ~~~~~~~~~~--~~~-~-----------------------------------------------~~~~~~~~~~~~~~~~ 205 (375)
T TIGR00899 176 LPSYPRGAPG--ALT-R-----------------------------------------------LEVRGLLASRDTRLLF 205 (375)
T ss_pred CCCcccCccc--ccC-c-----------------------------------------------chhhhhhcCcchHHHH
Confidence 6764322100 000 0 0112234555555544
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhCCCcchhh-hhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHH
Q 012500 252 LGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMM-FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 330 (462)
Q Consensus 252 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (462)
...++..........+.|.++++..+.++.... .........+++.++.|++.||+++| +.+............
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~~~~~~ 280 (375)
T TIGR00899 206 VACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKR-----RLMLLAALAGVAFYT 280 (375)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcch-----hHHHHHHHHHHHHHH
Confidence 444444444445566788898888888865543 33444455677888999999999988 655554444443333
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHH
Q 012500 331 TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTL 410 (462)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 410 (462)
.....++.+.......+.+++.+...+.......+..| ++++++.++.+...+. |..++|.+.|.+.|..| ++..+.
T Consensus 281 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-g~~~g~~~~g~~~~~~g-~~~~~~ 357 (375)
T TIGR00899 281 GLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMP-GRAGAATTLYTNTGRV-GWIIAGSVGGILAERWS-YHAVYW 357 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-chhhHHHHHHHHHHHH-HHHHHHHHHHHHHHhcc-chhHHH
Confidence 33334455555555555566666555555555556554 4567999999766665 99999999999999876 767777
Q ss_pred HHHHHHHHHHHHH
Q 012500 411 ALTSIFFLAAGIW 423 (462)
Q Consensus 411 ~~~~~~~~~~~~~ 423 (462)
..+.+.+.+.++.
T Consensus 358 ~~~~~~~~~~~~~ 370 (375)
T TIGR00899 358 FAIVMLIVALFCL 370 (375)
T ss_pred HHHHHHHHHHHHH
Confidence 6666555544443
No 38
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=4.3e-32 Score=253.58 Aligned_cols=319 Identities=14% Similarity=0.100 Sum_probs=233.6
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccc
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS 104 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 104 (462)
++.+..+.+. ..+.+.++..+.+++.|++ ||+|||+++..+.++.+++.+.+.++++++.+++.|+++|++.+...|
T Consensus 41 ~g~s~~~~gl--~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~ 118 (400)
T PRK11646 41 LGWAAVMVGI--ALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDP 118 (400)
T ss_pred hCCcHHHHHH--HHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 6777888666 8899999999999999999 999999999999999999999999999999999999999999998889
Q ss_pred cccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCccc
Q 012500 105 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAES 184 (462)
Q Consensus 105 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 184 (462)
...+++.|++|+++|++++++.....++|..+||.+++.+. .+|||+.|++.++..++..++..+..||... +
T Consensus 119 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~------~ 191 (400)
T PRK11646 119 PRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKL------S 191 (400)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcccc------c
Confidence 89999999999999999999999999999999999999998 6799999999988776665555555454210 0
Q ss_pred cccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHH
Q 012500 185 GKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAY 264 (462)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (462)
++.. +..+++++++++|.++...+..+.........
T Consensus 192 ~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (400)
T PRK11646 192 TVRT--------------------------------------------PVREGMTRVLRDKRFVTYVLTLTGYYMLAVQV 227 (400)
T ss_pred ccch--------------------------------------------hhHHHHHHHHcCchHHHHHHHHHHHHHHHHHH
Confidence 0000 00123556778887776555444444433445
Q ss_pred HHHhhHHHHHHhCCCcchhhhhhhHHHhhhhhhhhhhHHHhh-hccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 012500 265 SYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLA 343 (462)
Q Consensus 265 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (462)
..+.|.|.++..+.+.......+...+....+....+++.|| ++.+ +.+..+..+...........++.+....
T Consensus 228 ~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 302 (400)
T PRK11646 228 MLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLE-----HRLMAGLLIMSLSMFPIGMVSNLQQLFT 302 (400)
T ss_pred HHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh-----HHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 567899988876643222233344444444444444555554 4433 3344444444443333334445544445
Q ss_pred HHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhc
Q 012500 344 LFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 403 (462)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g 403 (462)
...+.+.+.+...+.......+..|+++|+++.|+.+...+. |..++|.+.|++.|+.+
T Consensus 303 ~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~ig~~l~G~l~~~~~ 361 (400)
T PRK11646 303 LICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLAL-GGAIGYIGGGWLFDLGK 361 (400)
T ss_pred HHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHH-HHHhcccchHHHHHHHh
Confidence 555566666666777788888899999999999999766666 99999999999999864
No 39
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3e-32 Score=249.59 Aligned_cols=391 Identities=14% Similarity=0.087 Sum_probs=268.7
Q ss_pred ccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhcc---chhHHHHHHHHHhhcccccccccc
Q 012500 31 LAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSS---FDFWSIAICRMLVGVGEASFISLA 106 (462)
Q Consensus 31 ~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~~ 106 (462)
.+..+|...+.+.+|.++++...+.+ ||+|||..+.++.++..++.++..++ +++.+++++|++.|+..|......
T Consensus 58 ~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~ 137 (485)
T KOG0569|consen 58 LDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLV 137 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHH
Confidence 34446899999999999999999999 99999999999998888888877764 689999999999999999999999
Q ss_pred cchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHH--HhhcccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCccc
Q 012500 107 APFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGG--VVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAES 184 (462)
Q Consensus 107 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~--~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 184 (462)
+.++.|..|.+.||......+.+..+|.+++..++. .+.+...|++.+....+++++..+... +.||+|++.-.++.
T Consensus 138 pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~-~~PESPk~Ll~~k~ 216 (485)
T KOG0569|consen 138 PMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLP-FLPESPKYLLIKKG 216 (485)
T ss_pred HHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHh-cCCCCcchHHHHcC
Confidence 999999999999999999999999999999977763 444566799999999888766655544 45999987643222
Q ss_pred cccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHH-----HHHH
Q 012500 185 GKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI-----AYNF 259 (462)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 259 (462)
+ +.+.++..+..+..++.++..++..++.++.+.++.. ..+++++++++..+.-....+ ....
T Consensus 217 ~-~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~-----------~~sl~~~~~~~~lR~~~~i~~~v~~~qq~s 284 (485)
T KOG0569|consen 217 D-EEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKK-----------QISLRQLLKNPTLRRPLLIGIVVSFAQQFS 284 (485)
T ss_pred C-HHHHHHHHHHHhCCCcchhHHHHHHHHHHHhcccccc-----------CCcHHHHhcCcchhHHHHHHHHHHHHHHhc
Confidence 1 1222222222222222222222222222111111100 125667777766554332222 2222
Q ss_pred HHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHh---
Q 012500 260 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL--- 335 (462)
Q Consensus 260 ~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 335 (462)
+.+....|...++.+ .|.+.... ..........++.++++.++.||.||| ++++.+..++.+..+++...
T Consensus 285 Gi~ai~~Yst~i~~~-aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR-----pLll~~~~~~~~~~~~~~~~~~l 358 (485)
T KOG0569|consen 285 GINAIFFYSTSIFKT-AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR-----PLLLISLSLMAVALLLMSIALFL 358 (485)
T ss_pred CcceeHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556666666666 45665544 455677888999999999999999999 88877766666554443321
Q ss_pred hh---hH---HHHHHHHHHHHHHHhccccceeeeecc-CCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHH
Q 012500 336 SS---LY---GFLALFTVGELLVFATQAPVNYVCLHS-VKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKT 408 (462)
Q Consensus 336 ~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~ 408 (462)
.+ .| ..++..++..+.++.+.+++.+.+..| +|++.|+.+.++.....+. ..++-...+..+.+..|. ..
T Consensus 359 ~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~-~~fiv~~~fp~l~~~~g~--~~ 435 (485)
T KOG0569|consen 359 SNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWL-SNFIVGFAFPPLQNVIGP--YV 435 (485)
T ss_pred HHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcc--hh
Confidence 11 11 234556666677777777777666555 7778999999999766666 777788899999998886 23
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcc-ccccchhhhcccCc
Q 012500 409 TLALTSIFFLAAGIWFVGIFLKS-IDKFNEDGENQISL 445 (462)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 445 (462)
++.+.+. +.....+.++++|| |+|+.+|+.++.++
T Consensus 436 filF~i~--~~~~~i~~~~~lPETkgr~~~eI~~~~~~ 471 (485)
T KOG0569|consen 436 FILFVIP--LAIFLIYLYRYLPETKGRTPYEIIEELEK 471 (485)
T ss_pred hHHHHHH--HHHHHHHHHHhCcccCCCCHHHHHHHHHh
Confidence 4433333 33344455667887 77887776665443
No 40
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=1.7e-31 Score=246.17 Aligned_cols=335 Identities=13% Similarity=0.014 Sum_probs=252.5
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhcc-----chhHHHHHHHHHhhccc
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSS-----FDFWSIAICRMLVGVGE 99 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~ 99 (462)
+++|++|.++ +.+.+.+++.+..++.|++ ||+|.|+++..+.+++++.++..+++ +|++.+++.|++.|++
T Consensus 65 ~~ls~~q~g~--l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig- 141 (462)
T PRK15034 65 FNFTTDQLFL--LTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA- 141 (462)
T ss_pred cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-
Confidence 7888888655 9999999999999999999 99999999999999999999999987 8999999999999998
Q ss_pred ccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhh------------------cccchHHHHHHHHHHH
Q 012500 100 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG------------------SHLNWRYAFWGEAILM 161 (462)
Q Consensus 100 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~------------------~~~gwr~~f~~~~~~~ 161 (462)
+..++.....+++|+|+++||+++|+.....++|..+++++...+. +..+||.++++..++.
T Consensus 142 g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~ 221 (462)
T PRK15034 142 GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLL 221 (462)
T ss_pred HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHH
Confidence 6688899999999999999999999997777777766655554322 1345898888888888
Q ss_pred HHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHH
Q 012500 162 LPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVL 241 (462)
Q Consensus 162 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (462)
++..++.++..++.+. + +.. .++.++.
T Consensus 222 iv~~i~~~~~~~~~~~------~-~~~----------------------------------------------~~~~~~v 248 (462)
T PRK15034 222 AIATIAAWSGMNDIAS------S-RAS----------------------------------------------IADQLPV 248 (462)
T ss_pred HHHHHHHHHhCCCccc------c-ccC----------------------------------------------HHHHHHH
Confidence 7777777766543211 0 000 1345678
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHH
Q 012500 242 LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSA 320 (462)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 320 (462)
+|+|..|...+.+++.+..+.++..++|.|.++.+... .. ....+..+...+.++++|+++||+|++ +.+..
T Consensus 249 lk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~~~--~~l~~~~l~~l~~~l~rplgG~LADRiG~~-----~vl~~ 321 (462)
T PRK15034 249 LQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFPDV--NILRLAFFGPFIGAIARSVGGAISDKFGGV-----RVTLI 321 (462)
T ss_pred hCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcChH--HHHHHHHHHHHHHHHHHHhhHHHHHhcCch-----HHHHH
Confidence 99999999999999988889899999999998866322 22 223445677788899999999999998 66665
Q ss_pred HHHHHHHHHHH-HHHh-----hhhHHHHHHHHHHHHHHHhccccceeeeeccCCc---------------------chhh
Q 012500 321 ATFLGAISCLT-AFCL-----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP---------------------SLRA 373 (462)
Q Consensus 321 ~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~ 373 (462)
......+.... .... .+.+...+.+....++.+......+-.+.+.+|+ ++.|
T Consensus 322 ~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g 401 (462)
T PRK15034 322 NFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETA 401 (462)
T ss_pred HHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHH
Confidence 55444433322 1111 1334444444445566666666777677666653 1567
Q ss_pred HHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHHHHHHHHHH
Q 012500 374 LSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 424 (462)
Q Consensus 374 ~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 424 (462)
.+.|+.. ..+.+|+++-|.+.|...+.+|++...++.+....+++..+.+
T Consensus 402 ~v~G~v~-a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w 451 (462)
T PRK15034 402 AALGFIS-AIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTW 451 (462)
T ss_pred HHHHHHH-HHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 8888884 5555599999999999999999998888888777666665554
No 41
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=5.3e-32 Score=256.64 Aligned_cols=364 Identities=12% Similarity=0.056 Sum_probs=245.9
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhcc----chhHHHHHHHHHhhcccc
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSS----FDFWSIAICRMLVGVGEA 100 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G~~~g 100 (462)
.+.++.+.++ ..+.+.++..+++++.|++ ||+|||+++..+.++.+++.++.++. ++++.+.+.|++.|++.+
T Consensus 56 ~g~s~~~~g~--~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g 133 (438)
T TIGR00712 56 QGFSKGELGF--ALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQG 133 (438)
T ss_pred cCCCHhHhHH--HHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhh
Confidence 4778888555 9999999999999999999 99999999999999999999887764 467788899999999999
Q ss_pred cccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhh-cccchHHHHHHHHHHHHHHHHHHhhccccccCCC
Q 012500 101 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 179 (462)
Q Consensus 101 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~-~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 179 (462)
..++.....+.|++|+++|++++++.+.+.++|..+++.+.+... ++.+||+.|++.++++++..+..+++.||++++.
T Consensus 134 ~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~ 213 (438)
T TIGR00712 134 MGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSC 213 (438)
T ss_pred cchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhc
Confidence 888888899999999999999999999999999999988776544 4579999999999988887777777777654332
Q ss_pred CCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHH
Q 012500 180 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF 259 (462)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (462)
+.++.++.. ++... +. .++ ++++ .+.++. ..+.+++++.+|...+..++...
T Consensus 214 ~~~~~~~~~----------~~~~~----~~-~~~----~~~~-------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 265 (438)
T TIGR00712 214 GLPPIEEYR----------NDYPD----DY-NEK----AEQE-------LTAKEI--FMQYVLPNKLLWYIAIANVFVYL 265 (438)
T ss_pred CCCCchhcc----------ccccc----cc-ccc----cccc-------cchHHH--HHHHHccCchHHHHHHHHHHHHH
Confidence 111100000 00000 00 000 0000 000000 12346788989888777777777
Q ss_pred HHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHH-HHHHHHHHHHHh--
Q 012500 260 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF-LGAISCLTAFCL-- 335 (462)
Q Consensus 260 ~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-- 335 (462)
..+++.+|.|.|+++..|.++... .......+.++++.++.|++.||++++++ ........ ............
T Consensus 266 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 342 (438)
T TIGR00712 266 LRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNR---GATGVFFMTLVTIAVIVYWMNPA 342 (438)
T ss_pred HHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc---cHHHHHHHHHHHHHHHHHHhcCC
Confidence 777888999999999888886554 44466778889999999999999965421 22111111 111111111111
Q ss_pred hhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHH
Q 012500 336 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 415 (462)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 415 (462)
.+.+......+..+++.............+..|++.|+++.|+.+...+..|.+++|.+.|.+.|..| +...+......
T Consensus 343 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g-~~~~~~~~~~~ 421 (438)
T TIGR00712 343 GNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGG 421 (438)
T ss_pred CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhcc-chHHHHHHHHH
Confidence 12222222222233322111111123456778889999999999766666345789999999999876 77777766665
Q ss_pred HHHHHHHH
Q 012500 416 FFLAAGIW 423 (462)
Q Consensus 416 ~~~~~~~~ 423 (462)
.+++.+..
T Consensus 422 ~~~~~~~~ 429 (438)
T TIGR00712 422 SILAVILL 429 (438)
T ss_pred HHHHHHHH
Confidence 54444443
No 42
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=1.1e-31 Score=251.85 Aligned_cols=322 Identities=9% Similarity=0.006 Sum_probs=230.2
Q ss_pred ccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhccccccc
Q 012500 25 FLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI 103 (462)
Q Consensus 25 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~ 103 (462)
+++.+..+.+. ..+.+.+++.+++++.|.+ ||+|||+++..+.++++++++++++++|++.++++|+++|++.+...
T Consensus 45 ~~~~~~~~~~~--~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~ 122 (413)
T PRK15403 45 DFNADVSLAPA--SVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIA 122 (413)
T ss_pred HhCCCHHHHHH--HHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 36777777545 8999999999999999999 99999999999999999999999999999999999999999998777
Q ss_pred ccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCcc
Q 012500 104 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAE 183 (462)
Q Consensus 104 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 183 (462)
+....++.|++|+++|++++++...+..+|..+||.+++.+.++.|||+.|++.++..++..+..++..||+++.. +
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~---~ 199 (413)
T PRK15403 123 TVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVKRG---A 199 (413)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCcccc---C
Confidence 7778889999999999999999999999999999999999998899999999999887777665555567643210 0
Q ss_pred ccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHH
Q 012500 184 SGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGA 263 (462)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (462)
+ +.. .+...++++++++||.++...+...+.......
T Consensus 200 ~-~~~------------------------------------------~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~ 236 (413)
T PRK15403 200 V-PFS------------------------------------------AKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMS 236 (413)
T ss_pred C-CCC------------------------------------------hHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 0 000 000123567888999999988877777777778
Q ss_pred HHHHhhHHHHHHhCCCcchhhhh-hhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHH---HHHHHHHHHH--HHhhh
Q 012500 264 YSYWGPKAGYNIYHMSNADMMFG-GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT---FLGAISCLTA--FCLSS 337 (462)
Q Consensus 264 ~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~ 337 (462)
+..+.|.++++.+|.++....+. .....+.+++..+.+++.++..++ +...... .++....... ...++
T Consensus 237 ~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~-----~~~~~~~~~~~ig~~l~~~~~~~~~~~ 311 (413)
T PRK15403 237 WVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEP-----RFIWRAVPIQLVGLALLIVGNLLWPHV 311 (413)
T ss_pred HHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCch-----hHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 88889999999888887665433 344556666666666665443332 2211111 1111111111 11222
Q ss_pred hHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhh
Q 012500 338 LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 401 (462)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~ 401 (462)
.+..+...++.+++.+...+....... .-.+..+|++.++.+..... +...++...+++.+.
T Consensus 312 ~~~~~~~~~l~~~G~~~~~p~~~~~al-~~~~~~~G~a~a~~~~~~~~-~~~~~~~~~g~~~~~ 373 (413)
T PRK15403 312 WLWSVLGTSLYAFGIGLIFPTLFRFTL-FSNNLPKGTVSASLNMVILM-VMAVSVEIGRWLWFN 373 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHh-ccCCCCCcHHHHHHHHHHHH-HHHHHHHHHHHHHHc
Confidence 222345556666666666655553221 11122468888888666555 667788888888776
No 43
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.2e-33 Score=258.12 Aligned_cols=365 Identities=14% Similarity=0.138 Sum_probs=272.5
Q ss_pred ccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccc--hhHHHHHHHHHhhccccc
Q 012500 25 FLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEAS 101 (462)
Q Consensus 25 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~g~ 101 (462)
+++.++.+.+. +.++++.|+++++.+.|++ ||+|.|+++..+.++.++++++..++. +++.+++.|++||++.|.
T Consensus 67 ~~~ws~~~k~~--i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 67 EYDWSSTEKGL--IFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred eecCCHHHHHH--HHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 35566666555 9999999999999999999 999999999999999999999999875 556789999999999999
Q ss_pred ccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcc-cchHHHHHHHHHHHHHHHHHHhhccccccCCCC
Q 012500 102 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA 180 (462)
Q Consensus 102 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 180 (462)
.+|+...+.++|.|++||++..++...+..+|.+++.+++|++.+. .||+++|++.++.+++..++++++..++|.+++
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~ 224 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHP 224 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence 9999999999999999999999999999999999999999999998 999999999999999999888888765544321
Q ss_pred CccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHH
Q 012500 181 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV 260 (462)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (462)
.-.+ ++. +.+++.+.+.+.++ ....+++++++++.+|...+..++.+..
T Consensus 225 ~is~-~El-------------------~~I~~~k~~~~~~~-----------~~~vP~~~i~ts~~vwai~~~~f~~~~~ 273 (466)
T KOG2532|consen 225 NISE-KEL-------------------KYIEKGKSEAHVKK-----------KPPVPYKAILTSPPVWAIWISAFGGNWG 273 (466)
T ss_pred CCCH-HHH-------------------HHHHhcccccccCC-----------CCCCCHHHHHcCHHHHHHHHHHHHHHHH
Confidence 1111 100 00000000000000 0124789999999999999999999999
Q ss_pred HHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhcccc---ccchhHHHH-HHHHHHHHHHHHHHh
Q 012500 261 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATI---SNAFKLLSA-ATFLGAISCLTAFCL 335 (462)
Q Consensus 261 ~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~ 335 (462)
.+.+..|+|.|+++..+++..+. .+.+++.+...+..+++|.++||+.+|. ..+|++.-. +....++.++.+.+.
T Consensus 274 ~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~ 353 (466)
T KOG2532|consen 274 FYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFT 353 (466)
T ss_pred HHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeec
Confidence 99999999999999999996665 5668999999999999999999997751 113455433 333333344444444
Q ss_pred hh--hHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHh-h-hcchhHHHHH
Q 012500 336 SS--LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD-H-VNNWRKTTLA 411 (462)
Q Consensus 336 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~-~-~g~~~~~~~~ 411 (462)
+. .+..++++.+.....+...+. .........|++.+..+|+.+...+. +++++|.+.|.+.. . ..+|+..|++
T Consensus 354 ~~~~~~~a~~~l~~~~~~~g~~~~G-f~~~~~~~apq~a~~l~g~~~~~~~~-~~~~~P~~vg~~~~~~t~~eW~~VF~i 431 (466)
T KOG2532|consen 354 SDEHRLLAVILLTIAIGLSGFNISG-FYKNHQDIAPQHAGFVMGIINFVGAL-AGFIAPLLVGIIVTDNTREEWRIVFLI 431 (466)
T ss_pred CCCcchHHHHHHHHHHHHcccchhh-hHhhhhhccchHHHHHHHHHHHHHHH-HHHHHHHheeeEeCCCCHHHHHHHHHH
Confidence 32 223333333333333333222 22333332578899999999866666 88899999999984 1 2368888888
Q ss_pred HHHHHHHHHHHHH
Q 012500 412 LTSIFFLAAGIWF 424 (462)
Q Consensus 412 ~~~~~~~~~~~~~ 424 (462)
.+++.+++.+.+.
T Consensus 432 ~a~i~~~~~i~f~ 444 (466)
T KOG2532|consen 432 AAGILIVGNIIFL 444 (466)
T ss_pred HHHHHHHhchhee
Confidence 8777666664443
No 44
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=1.5e-32 Score=264.58 Aligned_cols=383 Identities=15% Similarity=0.086 Sum_probs=230.9
Q ss_pred ccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhcc------------chhHHHHHHHH
Q 012500 27 SLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSS------------FDFWSIAICRM 93 (462)
Q Consensus 27 ~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~------------~~~~~l~~~r~ 93 (462)
+.++.+. ++..+.+.++..+++++.|++ ||+|||+++..+.+++.++.+.++++ ++++.++++|+
T Consensus 51 ~~~~~~~--~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~ 128 (479)
T PRK10077 51 SAANSLL--GFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRI 128 (479)
T ss_pred cCChhHH--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHH
Confidence 5555664 459999999999999999999 99999999999999999998887763 23567889999
Q ss_pred HhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhh--------cccchHHHHHHHHHHHHHHH
Q 012500 94 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFA 165 (462)
Q Consensus 94 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~--------~~~gwr~~f~~~~~~~~~~~ 165 (462)
++|++.|...+...++++|++|+++|++++++.+.+..+|.++++.+++.+. +++|||+.|++.++..++..
T Consensus 129 l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~ 208 (479)
T PRK10077 129 IGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFL 208 (479)
T ss_pred HHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988776543 45799999999888777765
Q ss_pred HHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhh
Q 012500 166 VLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEK 245 (462)
Q Consensus 166 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (462)
+. .+++||++++...+++.++. +...++....++ ..+..++..+...++ ....+..+...
T Consensus 209 ~~-~~~l~~s~~~l~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~--------------~~~~~~~~~~~ 268 (479)
T PRK10077 209 ML-LYFVPETPRYLMSRGKQEQA--EGILRKIMGNTL---ATQALQEIKHSLDHG--------------RKTGGKLLMFG 268 (479)
T ss_pred HH-HHcCCCCcHHHHHcCCHHHH--HHHHHHHcCChh---HHHHHHHHHHHHHHh--------------hhhhhhhcchh
Confidence 44 45568775432111111100 000000000000 000000000000000 00000111100
Q ss_pred HHHHH---HHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHH
Q 012500 246 VYVVN---VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA 321 (462)
Q Consensus 246 ~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 321 (462)
..... ....+......+...++.|.+.++ .+.+.... .......+..+++.++.++++||++|| +.+..+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r-----~~~i~~ 342 (479)
T PRK10077 269 VGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRK-----PLQIIG 342 (479)
T ss_pred HHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCh-----HHHHHh
Confidence 00000 011111112233445667776655 56654333 334556778889999999999999998 766666
Q ss_pred HHHHHHHHHHHHHh--hhhH--HHHHHHHHHHHHHHhcc-ccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHH
Q 012500 322 TFLGAISCLTAFCL--SSLY--GFLALFTVGELLVFATQ-APVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVG 396 (462)
Q Consensus 322 ~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g 396 (462)
..+..+........ .+.. ......++.+.+.+... +.....+.+.+|++.|+++.|+.+...+. +.++++.+.+
T Consensus 343 ~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~-g~~~~~~~~p 421 (479)
T PRK10077 343 ALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWI-ANYFVSWTFP 421 (479)
T ss_pred HHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHH-HHHHHHHHhH
Confidence 65555544333221 1111 22223333333443333 44567778888889999999999655555 7777876666
Q ss_pred HHH------hhhcchhHHHHHHHHHHHHHHHHHHHHHhhcc-ccccchhhhc
Q 012500 397 VLQ------DHVNNWRKTTLALTSIFFLAAGIWFVGIFLKS-IDKFNEDGEN 441 (462)
Q Consensus 397 ~l~------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 441 (462)
.+. |..+ +...+++.++..+++.++.+ ...+| |++..+|.++
T Consensus 422 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~e~~~~~~~~~~~ 470 (479)
T PRK10077 422 MMDKNSWLVAHFH-NGFSYWIYGCMGVLAALFMW--KFVPETKGKTLEEMEA 470 (479)
T ss_pred HHHhccchhhhcc-CccHHHHHHHHHHHHHHHHH--hccccCCCCCHHHHHH
Confidence 544 4444 34455555544333333322 23344 4444444433
No 45
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=8.4e-32 Score=258.49 Aligned_cols=366 Identities=13% Similarity=0.075 Sum_probs=255.1
Q ss_pred HhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 012500 15 ILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRM 93 (462)
Q Consensus 15 ~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 93 (462)
.+|.+.++ ++.++.+.++ ..+.+.++..++.++.|++ ||+|||+++..+.++.+++.++++++++++.+++.|+
T Consensus 32 ~~p~~~~~---~g~s~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 106 (471)
T PRK10504 32 ALPSMAQS---LGESPLHMHM--VIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARV 106 (471)
T ss_pred HHHHHHHH---hCcCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 36755554 7888877555 8899999999999999999 9999999999999999999999999999999999999
Q ss_pred HhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccc
Q 012500 94 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKP 173 (462)
Q Consensus 94 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p 173 (462)
++|++.+...+...+++.|++|+++|+++.++.....++|..+||.+++.+.++.|||+.|++......+..+......|
T Consensus 107 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~ 186 (471)
T PRK10504 107 LQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMP 186 (471)
T ss_pred HHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999988777666666655555
Q ss_pred cccCCCCCcccccccccccc------c-cccccccccccccccccch--------hhhhhhhccccccchhhhhcchhhH
Q 012500 174 LQLKGFAPAESGKAQVVASV------S-EGSEASNLNDHVSEDISDQ--------ASERSIKSIGESRFLNQLSQFSQDT 238 (462)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (462)
+.+... ++.+....... . ...++.+............ .....++.+.+ +...+.
T Consensus 187 ~~~~~~---~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 255 (471)
T PRK10504 187 NYTMQT---RRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNN--------RALFSL 255 (471)
T ss_pred CccccC---CCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCC--------CCccCH
Confidence 432111 00000000000 0 0000000000000000000 00000000000 001123
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchhh-hhhhHHHhhhhhhhhhhHHHhhhccccccchhH
Q 012500 239 KVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMM-FGGVTIVCGIVGTISGGFILDQMGATISNAFKL 317 (462)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 317 (462)
++++||.++......++..........+.|.|++...|.++.... ......++.+++.++.+++.||+++| +.
T Consensus 256 -~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~-----~~ 329 (471)
T PRK10504 256 -KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR-----RV 329 (471)
T ss_pred -HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-----HH
Confidence 478899888888777777777767777889999887788765553 33555666677778899999999998 77
Q ss_pred HHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhH
Q 012500 318 LSAATFLGAISCLTAFCL---SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPL 394 (462)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 394 (462)
+..+..+..+........ ++.+.......+.+++.+...+.......+.+|++.++.+.++.++.... |..+++.+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~ig~~i 408 (471)
T PRK10504 330 LVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQL-SMSIGVTI 408 (471)
T ss_pred HHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHH-HHHHHHHH
Confidence 665555444443333322 22222233344455666666667777778889999999999999766666 99999999
Q ss_pred HHHHHhhhc
Q 012500 395 VGVLQDHVN 403 (462)
Q Consensus 395 ~g~l~~~~g 403 (462)
.|.+.+..|
T Consensus 409 ~g~ll~~~g 417 (471)
T PRK10504 409 AGLLLGLFG 417 (471)
T ss_pred HHHHHHHhh
Confidence 999988765
No 46
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=2e-31 Score=249.81 Aligned_cols=319 Identities=16% Similarity=0.126 Sum_probs=241.8
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccc
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS 104 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 104 (462)
++.++.+.+. ..+.+.++..+++++.|++ ||+|||+++..+.++.+++.+.++++++++.+++.|++.|++.+...+
T Consensus 35 ~g~s~~~~g~--~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 112 (385)
T TIGR00710 35 LSTPASIVQM--TLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSV 112 (385)
T ss_pred hCCCHHHHHH--HHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHH
Confidence 7888888655 9999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred cccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCccc
Q 012500 105 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAES 184 (462)
Q Consensus 105 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 184 (462)
...+++.|++|+++|++++++.+....+|..+++.+++.+.++.+||+.|++.++..++..+..++..||+++.. +
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 188 (385)
T TIGR00710 113 ISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYE----A 188 (385)
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCc----c
Confidence 999999999999999999999999999999999999999999999999999998887777766666655532110 0
Q ss_pred cccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHH
Q 012500 185 GKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAY 264 (462)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (462)
++.. ++..++.++.++++.++...+............
T Consensus 189 ~~~~-------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (385)
T TIGR00710 189 RIQI-------------------------------------------STYFETFLLLLKSKMFWGYALIYGASFGGFFAF 225 (385)
T ss_pred cCCH-------------------------------------------HHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHH
Confidence 0000 000124566778888888777666666667777
Q ss_pred HHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHh-----hhh
Q 012500 265 SYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL-----SSL 338 (462)
Q Consensus 265 ~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 338 (462)
..+.|.++++.++.++... .......++.+++.++.+++.||+++| +.+.....+........... +..
T Consensus 226 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (385)
T TIGR00710 226 FSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAK-----SLLRMGLILFAVSAVLLEITAILGLGSW 300 (385)
T ss_pred HHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHHHHHhccchH
Confidence 7888999988888886555 344667788899999999999999987 55544443333322222211 122
Q ss_pred HHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHh
Q 012500 339 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 400 (462)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~ 400 (462)
........+.+++.+...+.......+..| +.++++.++.+......|.+.+| +.+.+.+
T Consensus 301 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~-~~~~~~~ 360 (385)
T TIGR00710 301 AMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGY-LVSLIHG 360 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHH-HHHhccc
Confidence 233334455566666666666666666654 67899999987776665665555 5554444
No 47
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=3.2e-31 Score=248.43 Aligned_cols=323 Identities=14% Similarity=0.048 Sum_probs=229.5
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRML 94 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 94 (462)
+|.+.++ ++.++.+.+. ..+.+.++..+++++.|++ ||+|||+++..+.++..++.+++.+++|++.+++.|++
T Consensus 26 lp~~~~~---~~~s~~~~~~--~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 100 (392)
T PRK10473 26 LPRIAAD---LNASEAQLHI--AFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFL 100 (392)
T ss_pred HHHHHHH---hCCCHHHHHH--HHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 5644444 7888877555 9999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhcccc
Q 012500 95 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 174 (462)
Q Consensus 95 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 174 (462)
+|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+||+.|++.++++++..++.++..||
T Consensus 101 ~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 180 (392)
T PRK10473 101 QGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKE 180 (392)
T ss_pred HHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999998999999999999999999999999999999999999999998888899999999988887777776666665
Q ss_pred ccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHH
Q 012500 175 QLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGY 254 (462)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (462)
+++.. +++.. . ..+..++.++++.++...+..
T Consensus 181 ~~~~~----~~~~~------------------------~--------------------~~~~~~~~~~~~~~~~~~~~~ 212 (392)
T PRK10473 181 TRPAR----APAAS------------------------S--------------------KPRENSESLLNRFFLSRLVIT 212 (392)
T ss_pred CCCcc----cCCcc------------------------c--------------------hHHHHHHHHhCHHHHHHHHHH
Confidence 42110 00000 0 001233556777766555544
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHH
Q 012500 255 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 333 (462)
Q Consensus 255 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (462)
.+.......+..+.|.++++..|.++... .......++.+++.++.+++.||+++| +.+..+..+.........
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~-----~~~~~~~~~~~~~~~~~~ 287 (392)
T PRK10473 213 TLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPR-----TLMLTSQVLFLAAGITLA 287 (392)
T ss_pred HHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHH
Confidence 44444444566677888888888886554 344667788889999999999999988 666655554444444433
Q ss_pred HhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchh-hHHHHHHHHHHhhhccccchhHHHHHHhhhc
Q 012500 334 CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLR-ALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 403 (462)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g 403 (462)
..++.+..+....+...+.+...+... ..+..|.++| +.+.++ .+ ++..+++.+.+++.+..|
T Consensus 288 ~~~~~~~~~~~~~l~~~g~~~~~~~~~--~~~~~~~~~~~g~~~~~----~~-~~~~~g~~~~~~l~~~~g 351 (392)
T PRK10473 288 LSPSHAVSLFGITLICAGFSVGFGVAM--SQALGPFSLRAGVASST----LG-IAQVCGSSLWIWLAAVLG 351 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHH--HHHhccCcccccHHHHH----HH-HHHHHHHHHHHHHHHHhc
Confidence 333333333333333333333332222 1222333333 333333 23 366677878888888776
No 48
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=3e-32 Score=263.14 Aligned_cols=367 Identities=13% Similarity=0.123 Sum_probs=265.3
Q ss_pred HHHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHH
Q 012500 13 GLILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAIC 91 (462)
Q Consensus 13 ~~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 91 (462)
+..+|.+.++ ++.+..+.++ ..+.+.++..++.++.|++ ||+|||+++..+.++..++.+++++++|++.++++
T Consensus 22 ~~~~p~~~~~---~g~s~~~~~~--~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 96 (485)
T TIGR00711 22 NVAIPTIAGD---LGSSLSQVQW--VITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIF 96 (485)
T ss_pred HHHHHHHHHh---cCCChhhhhH--HHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHH
Confidence 3336655554 7777777555 9999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhc
Q 012500 92 RMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 171 (462)
Q Consensus 92 r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 171 (462)
|+++|++.+...+...+++.|++|+++|+++++++..+..+|..+||.+++++.++++||+.|++.+.++++..++.++.
T Consensus 97 ~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~ 176 (485)
T TIGR00711 97 RVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFI 176 (485)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988887777766666
Q ss_pred cccccCCCCCcccccccccc-------ccccccccccccccccccccchh---------hhhhhhccccccchhhhhcch
Q 012500 172 KPLQLKGFAPAESGKAQVVA-------SVSEGSEASNLNDHVSEDISDQA---------SERSIKSIGESRFLNQLSQFS 235 (462)
Q Consensus 172 ~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 235 (462)
.|++++.. .++.++.... .......+.++.++..+...... .....+.+.+++ .
T Consensus 177 ~~~~~~~~--~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~ 246 (485)
T TIGR00711 177 LPRDKPAA--SENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNP--------L 246 (485)
T ss_pred cCCccccc--cCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCC--------c
Confidence 66532211 1111100000 00000000000000000000000 000000000000 1
Q ss_pred hhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccc
Q 012500 236 QDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNA 314 (462)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 314 (462)
.+ .++++++.++...+..++.....+....+.|.|+++..+.++.+. .......++.+++.++.|++.||+++|
T Consensus 247 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~---- 321 (485)
T TIGR00711 247 VD-LRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPR---- 321 (485)
T ss_pred cC-HHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcH----
Confidence 11 256788888888877777788888888899999999888887655 444667788899999999999999998
Q ss_pred hhHHHHHHHHHHHHHHHHH-Hh---hhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhcccc
Q 012500 315 FKLLSAATFLGAISCLTAF-CL---SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVP 390 (462)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 390 (462)
+.+..+..+......... .. .+.+.......+.+++.+...++......+..|+++++++.|+.+...+. |+.+
T Consensus 322 -~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~i 399 (485)
T TIGR00711 322 -KLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQL-GGSI 399 (485)
T ss_pred -HHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHH-HHHH
Confidence 666655555554444433 11 23344455566677777776666777777888999999999999766665 9999
Q ss_pred chhHHHHHHhh
Q 012500 391 SSPLVGVLQDH 401 (462)
Q Consensus 391 ~~~~~g~l~~~ 401 (462)
++.+.+.+.++
T Consensus 400 g~~i~g~~~~~ 410 (485)
T TIGR00711 400 GTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHH
Confidence 99999999885
No 49
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=1.4e-32 Score=254.31 Aligned_cols=320 Identities=19% Similarity=0.260 Sum_probs=240.9
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccc
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS 104 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 104 (462)
++.++.+.++ ..+.+.++..+++++.|++ ||+|||+++..+.++.+++.++..+++|++.+++.|++.|++.+...+
T Consensus 27 ~~~s~~~~~~--~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 104 (352)
T PF07690_consen 27 LGLSPSQIGL--LFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFSP 104 (352)
T ss_dssp STTTSHCHHH--HHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccccccccc
Confidence 7788888555 9999999999999999999 999999999999999999977777778888999999999999999999
Q ss_pred cccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCccc
Q 012500 105 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAES 184 (462)
Q Consensus 105 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 184 (462)
...+++.|++|+++|++++++.+.+.++|.+++|.+++.+.++.+||+.|++.+++.++..++..++.++++++.+.+++
T Consensus 105 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~ 184 (352)
T PF07690_consen 105 ASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESP 184 (352)
T ss_dssp HHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SS
T ss_pred cccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhcccccccccc
Confidence 99999999999999999999999999999999999999999999999999999998888877554555543322211111
Q ss_pred cccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHH
Q 012500 185 GKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAY 264 (462)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (462)
.+.. . +..++..+.++.+++++.+|......++........
T Consensus 185 ~~~~---------------------------~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (352)
T PF07690_consen 185 KESE---------------------------S------------KKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGF 225 (352)
T ss_dssp TTTT-----------------------------------------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred cccc---------------------------c------------ccccccccccccccccchhhhhhhhhhHHHHHHHHh
Confidence 1100 0 000000112456667777775555556666677778
Q ss_pred HHHhhHHHHHHhCCC-cchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHH---HHhhhhH
Q 012500 265 SYWGPKAGYNIYHMS-NADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA---FCLSSLY 339 (462)
Q Consensus 265 ~~~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 339 (462)
..+.|.|+.+.++.+ .... .......+..+++.++.+++.||++++ +................ ...++..
T Consensus 226 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (352)
T PF07690_consen 226 SFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRR-----RRLLIAILLLILGALGLLLLPFSSSPV 300 (352)
T ss_dssp HHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-----HHHHHHHHHHHHHHHHHCCSHHHCHHH
T ss_pred hcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----HHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 899999988888888 4444 445677788888899999999999886 33333333332222222 2223445
Q ss_pred HHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccch
Q 012500 340 GFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 392 (462)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 392 (462)
..+....+.+++.+...+.......+..|+++++++.|+.+...+. +..++|
T Consensus 301 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-~~~igP 352 (352)
T PF07690_consen 301 WLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSL-GGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHH-HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHCC
Confidence 5556667778888888888999999999999999999999766665 777665
No 50
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=100.00 E-value=1.8e-31 Score=250.99 Aligned_cols=354 Identities=14% Similarity=0.062 Sum_probs=243.8
Q ss_pred HHHHHHHhhhhhhhccccccccccccchhhHHHHH---HHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccch
Q 012500 9 LCLIGLILKRSMKKKKFLSLRKLAAGSSVNVLEFT---VTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFD 84 (462)
Q Consensus 9 ~~~~~~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~---~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 84 (462)
.+.+++..+.+.++.. .+.++.+.+..+....+. ++..+++++.|++ ||+|||+++..+.++..++.++++++++
T Consensus 9 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~ 87 (394)
T TIGR00883 9 FYLYGFAAVLVFHTFF-PPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPS 87 (394)
T ss_pred HHHHHHHHHHHHHHhc-CCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCC
Confidence 3455555564444432 234455544422333333 3445789999999 9999999999999999999999999998
Q ss_pred hH--------HHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhh--------ccc
Q 012500 85 FW--------SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG--------SHL 148 (462)
Q Consensus 85 ~~--------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~--------~~~ 148 (462)
++ .+++.|+++|++.+...+....++.|++|+++|+++.++.+.+..+|.++++.++..+. +.+
T Consensus 88 ~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~ 167 (394)
T TIGR00883 88 YATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEW 167 (394)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhcc
Confidence 75 47889999999999999999999999999999999999999999999999998876654 357
Q ss_pred chHHHHHHHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccch
Q 012500 149 NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFL 228 (462)
Q Consensus 149 gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (462)
+||+.|++.+++.++.... ....||+++..+++++++ +.
T Consensus 168 ~w~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---------------------------------~~------- 206 (394)
T TIGR00883 168 GWRIPFLVSAVLVLIGLYL-RRNLEETPVFEKAQEKHK---------------------------------KK------- 206 (394)
T ss_pred chHHHHHHHHHHHHHHHHH-HHhcCCChhHHHHHhccc---------------------------------cc-------
Confidence 8999999877655443322 222343221100000000 00
Q ss_pred hhhhcchhhHHHHhhhhH--HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHh
Q 012500 229 NQLSQFSQDTKVLLQEKV--YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILD 305 (462)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d 305 (462)
..+.++.++++. ++......++..........+.|.|+++..+.++... .......+...++.++.|++.|
T Consensus 207 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 280 (394)
T TIGR00883 207 ------RGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSD 280 (394)
T ss_pred ------cCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 012334445444 5555555566666677778899999988888776554 4446677888899999999999
Q ss_pred hhccccccchhHHHHHHHHHHHHH--HHHHH--hhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHH
Q 012500 306 QMGATISNAFKLLSAATFLGAISC--LTAFC--LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTV 381 (462)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (462)
|++|| +.+.....+..... ..... .++.+.......+.+++.+...++....+.+.+|++.|+++.++.+.
T Consensus 281 r~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 355 (394)
T TIGR00883 281 RIGRR-----PVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYN 355 (394)
T ss_pred HhchH-----HHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhH
Confidence 99988 55543333222221 11111 13444445555666777777777888888999999999999998644
Q ss_pred HHhhhccccchhHHHHHHhhhcchhHHHHHHHHH
Q 012500 382 SIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 415 (462)
Q Consensus 382 ~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 415 (462)
..+..|..++|.+.|++.|+.|.+...++....+
T Consensus 356 ~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~ 389 (394)
T TIGR00883 356 LAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAAL 389 (394)
T ss_pred hHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHH
Confidence 5555588899999999999887655544444433
No 51
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=2.6e-31 Score=250.86 Aligned_cols=350 Identities=13% Similarity=0.102 Sum_probs=252.2
Q ss_pred Hhhhhhhhccccccccccc---cchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHH
Q 012500 15 ILKRSMKKKKFLSLRKLAA---GSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAI 90 (462)
Q Consensus 15 ~~p~~~~~~~~~~~~~~~~---~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 90 (462)
.+|.+.++ ++.+..+. ..++..+.+.++..+++++.|++ ||+|||+++..+.++.+++.+++.+++|++.+++
T Consensus 36 ~l~~~~~~---~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (408)
T PRK09874 36 FLPLYVEQ---LGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLI 112 (408)
T ss_pred hHHHHHHH---hCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 35655544 56665442 13558899999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhh
Q 012500 91 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 170 (462)
Q Consensus 91 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 170 (462)
.|++.|++.+ ..+....++.|++|+++|++++++...+..+|..++|.+++.+.+..+||+.|++.+++.++..+..++
T Consensus 113 ~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (408)
T PRK09874 113 LRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLF 191 (408)
T ss_pred HHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999865 467778889999999999999999999999999999999999999899999999999887777666666
Q ss_pred ccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHH
Q 012500 171 IKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN 250 (462)
Q Consensus 171 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (462)
..||..+.. ++++.. + .++..+.++++.++..
T Consensus 192 ~~~~~~~~~---~~~~~~-----------------------------------------~----~~~~~~~~~~~~~~~~ 223 (408)
T PRK09874 192 CIRENFQPV---SKKEML-----------------------------------------H----MREVVTSLKNPKLVLS 223 (408)
T ss_pred HhccCcccc---cchhhh-----------------------------------------H----HHHHHHhCcCCchHHH
Confidence 655532110 000000 0 0012234455555443
Q ss_pred H-HHHHHHHHHHHHHHHHhhHHHHHHhCCCcch---h-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHH
Q 012500 251 V-LGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD---M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG 325 (462)
Q Consensus 251 ~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 325 (462)
. ...............+.|.|..+..+..... . .+.....++.+++.+..|++.||+++| +.+.....+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~-----~~~~~~~~~~ 298 (408)
T PRK09874 224 LFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPE-----KILITALIFS 298 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-----hhHHHHHHHH
Confidence 2 2233334444455667777877754433211 1 222445667778888899999999988 6665555555
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcch
Q 012500 326 AISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNW 405 (462)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~ 405 (462)
....+.....++.+...+...+.+++.+...+.......+..+++.+++..++.+...+. |..++|.+.|.+.|..| +
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~~gp~~~G~l~~~~g-~ 376 (408)
T PRK09874 299 VLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDI-GNVTGPLMGAAISANYG-F 376 (408)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHH-HHHhhHHHHHHHHhhcc-h
Confidence 444444444455555555666677777777777777777788889999999998666555 99999999999999876 7
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 012500 406 RKTTLALTSIFFLAAGIW 423 (462)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~ 423 (462)
...+...+++.+++.+..
T Consensus 377 ~~~f~~~~~~~l~~~~~~ 394 (408)
T PRK09874 377 RAVFLVTAGVVLFNAVYS 394 (408)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 777777776666555444
No 52
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=6.7e-31 Score=246.45 Aligned_cols=349 Identities=13% Similarity=0.152 Sum_probs=243.6
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhh---c-cchhHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCG---S-SFDFWSIAI 90 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~---~-~~~~~~l~~ 90 (462)
+|.++++ ++.++.+.+. ..+.+.++..+++++.|++ ||+|||+++..+.++.+++.+++. + .++++.+++
T Consensus 36 ~~~~~~~---~g~s~~~~g~--~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 110 (402)
T TIGR00897 36 LSPFLKA---LGLSPQQSAS--AFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILL 110 (402)
T ss_pred HHHHHHH---hCCCHHHhHH--HHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHH
Confidence 4545544 6788888666 9999999999999999999 999999999999999998877553 3 358888999
Q ss_pred HHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhh-hhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHh
Q 012500 91 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGV-ALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 169 (462)
Q Consensus 91 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~-~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 169 (462)
.|+++|++.+...+.....+.+++|+++|++++|+.+.+.++|. +++|.+++.+.+..||+..++......++..++.+
T Consensus 111 ~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 190 (402)
T TIGR00897 111 FYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIAL 190 (402)
T ss_pred HHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888788889999999999999999999999997 68999999998888977666655443333333334
Q ss_pred hccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHH
Q 012500 170 VIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVV 249 (462)
Q Consensus 170 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (462)
++.++.++ ++++++. + +.++..++++.++++|.++.
T Consensus 191 ~~~~~~~~----~~~~~~~-------------------~---------------------~~~~~~~~~~~~~~~~~~~~ 226 (402)
T TIGR00897 191 FSNKDIFT----PQHMQTR-------------------E---------------------KFSELGKAATILFTNPNVLL 226 (402)
T ss_pred hccCCCCC----cccccCC-------------------c---------------------chhhHHHHHHHHHcChhHHH
Confidence 43333110 0000000 0 00001123567788999988
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHH-HHHHHHHH
Q 012500 250 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLS-AATFLGAI 327 (462)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~-~~~~~~~~ 327 (462)
..+..++.....++..++.|.|.++ .+.++.+. .......++..++.+..|+++||++|| +... ...+....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~-----~~~~~~~~l~~~~ 300 (402)
T TIGR00897 227 GGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWM-----NTVRWFGGVGCGI 300 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-----hHHHHHHHHHHHH
Confidence 8877777777778888999998866 67776554 344667788899999999999999987 4332 22221211
Q ss_pred HH-HHHHH----hhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhh
Q 012500 328 SC-LTAFC----LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 402 (462)
Q Consensus 328 ~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~ 402 (462)
.. .+... .++.+.......+.+++.+... +..... .+.+|++|+++.|+.+...+. +..++|.+.|.+.|..
T Consensus 301 ~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~-~~~~~~-~~~~~~~~g~~~g~~~~~~~l-g~~~gp~i~g~l~~~~ 377 (402)
T TIGR00897 301 FTLALYYIPQHFGHSFAVALIIAIALGIFLAGYV-PLAAVF-PTLAPKHKGAAMSVLNLSAGL-SAFLAPAIAVLFIGFF 377 (402)
T ss_pred HHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHH-HHHHHH-HhhCcchhHHHHHHHHHHHHH-HHHHHHHHHHHHHhhc
Confidence 11 11111 1234444445555565555433 233343 345677899999999877766 8899999999999988
Q ss_pred cchhHHHHHHHHHHHHHHHHH
Q 012500 403 NNWRKTTLALTSIFFLAAGIW 423 (462)
Q Consensus 403 g~~~~~~~~~~~~~~~~~~~~ 423 (462)
| +...+++.+.+.+++.++.
T Consensus 378 g-~~~~~~~~a~~~~i~~~~~ 397 (402)
T TIGR00897 378 G-AIGVVWIFAALYVVSAFLT 397 (402)
T ss_pred c-hHHHHHHHHHHHHHHHHHH
Confidence 7 5566666665554444433
No 53
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=5.8e-31 Score=245.43 Aligned_cols=347 Identities=13% Similarity=0.058 Sum_probs=243.5
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccc
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS 104 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 104 (462)
++.++.+. +++.+.+.+++.+.+|+.|++ ||+|||+++..+.++.+++++.++++++. ++.|+++|++.+...|
T Consensus 33 ~~~s~~~~--~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~p 107 (393)
T PRK11195 33 LHYPDWSQ--PLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSP 107 (393)
T ss_pred cCCcHHHH--HHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
Confidence 56666664 559999999999999999999 99999999999999999999888777664 7899999999999999
Q ss_pred cccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCccc
Q 012500 105 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAES 184 (462)
Q Consensus 105 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 184 (462)
+..+++.|++|+++|++++++.+....+|.++||.+++.+.+. .|+..+.+.+...++. .+..+.+||++.+.++++.
T Consensus 108 a~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~-~~~~~~l~~~~~~~~~~~~ 185 (393)
T PRK11195 108 AKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLA-ALFNLFIPRLGARRPGQSW 185 (393)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHHhcCCCCcccccccCC
Confidence 9999999999999999999999999999999999999999885 4888887776554333 3334455654321100000
Q ss_pred cccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHH
Q 012500 185 GKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAY 264 (462)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (462)
++ . ...++..+..+.++++|.+........+........
T Consensus 186 -~~-------------------------~---------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 224 (393)
T PRK11195 186 -NP-------------------------I---------------ALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATL 224 (393)
T ss_pred -CH-------------------------H---------------HHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHH
Confidence 00 0 000111223456677777766555444444445555
Q ss_pred HHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 012500 265 SYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLA 343 (462)
Q Consensus 265 ~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (462)
....|.++++.+|.++... .......++.+++.+..+++.||.+++ +.+..+.... .........++.+....
T Consensus 225 ~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~-----~~~~~g~~~~-~~~~~~~~~~~~~~~~~ 298 (393)
T PRK11195 225 RFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVL-----RVLPAGILMG-LVVLLMALQHSLLPAYP 298 (393)
T ss_pred HHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-----chHHHHHHHH-HHHHHHHHHhHHHHHHH
Confidence 6667778888888887666 334667778888999999998887766 4444443332 22222233344454555
Q ss_pred HHHHHHHHHHhccccceeeeeccCCcch-hhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHHHHHHHH
Q 012500 344 LFTVGELLVFATQAPVNYVCLHSVKPSL-RALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGI 422 (462)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 422 (462)
...+.+++.+...++..+...+..|++. +|++.++.+...+. +..++..+.+.+ +..| .+..+++..+..+....+
T Consensus 299 ~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~-~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK11195 299 LLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENL-AMLLMLGLYSLL-VKLG-VPVVAVIVGFGLLVALAM 375 (393)
T ss_pred HHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHH-HHHHHHHHHHHH-HHcC-CCHHHHHHHHHHHHHHHH
Confidence 5556777777666777777766654444 79999999866666 888888888855 4545 556677666666666666
Q ss_pred HHHHHhh
Q 012500 423 WFVGIFL 429 (462)
Q Consensus 423 ~~~~~~~ 429 (462)
.+.+++.
T Consensus 376 ~~~~~~~ 382 (393)
T PRK11195 376 ALLWRWH 382 (393)
T ss_pred HHHHHHH
Confidence 5555543
No 54
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=4.1e-32 Score=262.20 Aligned_cols=374 Identities=13% Similarity=0.100 Sum_probs=236.5
Q ss_pred cccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhcc---chhHHHHHHHHHhhccccccccc
Q 012500 30 KLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSS---FDFWSIAICRMLVGVGEASFISL 105 (462)
Q Consensus 30 ~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~ 105 (462)
..+ .++..+.+.++..+++++.|++ ||+|||+++..+.+++.++.+++.+. .+++.++++|+++|++.+...+.
T Consensus 70 ~~~--~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 147 (481)
T TIGR00879 70 SSL--WGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASAL 147 (481)
T ss_pred hhH--HHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhH
Confidence 555 4559999999999999999999 99999999999999999999998554 45668999999999999999999
Q ss_pred ccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHH---HHhhcccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCc
Q 012500 106 AAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG---GVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPA 182 (462)
Q Consensus 106 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~---~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 182 (462)
...++.|++|+++|++++++.+.+..+|..+++.++ ....+..+||+.|++.++..++. ++..++.||+++....+
T Consensus 148 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~-~~~~~~l~~~~~~~~~~ 226 (481)
T TIGR00879 148 VPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLL-FLGLFFLPESPRWLVGK 226 (481)
T ss_pred HHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHH-HHHHhcCCCChHHHHHc
Confidence 999999999999999999999999999999999999 77667789999999966655444 34445557765322111
Q ss_pred cccccccccccccccccccccccccccccchhhh-hhhhccccccchhhhhcchhhHHHHhh---hhHHHHHHHHHHHHH
Q 012500 183 ESGKAQVVASVSEGSEASNLNDHVSEDISDQASE-RSIKSIGESRFLNQLSQFSQDTKVLLQ---EKVYVVNVLGYIAYN 258 (462)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 258 (462)
++.+.. ++...+..+.++ ......+.... ...+.... +..+..+....+.++ .+.++...+..+...
T Consensus 227 ~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (481)
T TIGR00879 227 GRVEEA--RKSLARLRGTSG---EDKELLDELELIDIKRSIEK----RSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQF 297 (481)
T ss_pred CChHHH--HHHHHHHhCCCC---CcHHHHHHHHHHHHHHHHHH----hhccccHHHHHhcCchhHHHHHHHHHHHHHHHH
Confidence 111110 000000000000 00000000000 00000000 000000112222222 333333333333333
Q ss_pred HHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHH---
Q 012500 259 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC--- 334 (462)
Q Consensus 259 ~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 334 (462)
........+.|.+.++ .+.+.... .......++.+++.++.+++.||++|| +.+..+..+.....+....
T Consensus 298 ~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 371 (481)
T TIGR00879 298 TGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRR-----PLLLIGAAGMAICLFVLGILGA 371 (481)
T ss_pred hCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----HHHHHHHHHHHHHHHHHHHHhh
Confidence 3344556677777655 56665433 444667788899999999999999998 6665554444443333321
Q ss_pred h-hh------hHHHHHHHHHHHHHHHhcccc-ceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchh
Q 012500 335 L-SS------LYGFLALFTVGELLVFATQAP-VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR 406 (462)
Q Consensus 335 ~-~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 406 (462)
. .+ ....+....+...+.+....+ ......+..|++.|+++.++.+...+. |.+++|.+.+.+.++.+ +.
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~l-g~~i~~~~~~~~~~~~~-~~ 449 (481)
T TIGR00879 372 SFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWL-ANFIVGFLFPTMLESIG-VG 449 (481)
T ss_pred cccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcC-cc
Confidence 1 11 222333333444444433433 344557778889999999999766665 89999999999998766 65
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012500 407 KTTLALTSIFFLAAGIW 423 (462)
Q Consensus 407 ~~~~~~~~~~~~~~~~~ 423 (462)
..++..+++.+++.++.
T Consensus 450 ~~f~~~~~~~~~~~i~~ 466 (481)
T TIGR00879 450 GVFIFFGGLNVLGLIFV 466 (481)
T ss_pred ceehhHHHHHHHHHHHH
Confidence 66666665544444433
No 55
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=2.1e-31 Score=257.74 Aligned_cols=372 Identities=11% Similarity=0.092 Sum_probs=233.4
Q ss_pred HhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 012500 15 ILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRM 93 (462)
Q Consensus 15 ~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 93 (462)
.+|.+.++ ++.++.+.+. ..+.+.++..+++++.|++ ||+|||+++..+.++.+++.+++++++|++.+++.|+
T Consensus 42 ~~~~i~~~---~~~s~~~~~~--~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 116 (496)
T PRK03893 42 VLTEVQGE---FGLTTVQAAS--LISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARL 116 (496)
T ss_pred HHHHHHHH---hCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 35644433 7788877555 9999999999999999999 9999999999999999999999999999999999999
Q ss_pred HhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccc
Q 012500 94 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKP 173 (462)
Q Consensus 94 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p 173 (462)
+.|++.+...+....++.|++|+++|++++++...+..+|..+++.+++.+.++++||+.|++..+..+ ..++.....|
T Consensus 117 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~-~~~~~~~~~p 195 (496)
T PRK03893 117 VIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPII-FALWLRKNLP 195 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH-HHHHHHHhCC
Confidence 999999999999999999999999999999999999999999999999999999999999987544332 2222222234
Q ss_pred cccCCCCCccccccccccccccccccccccccccccc-cchhhhhhhhccccc--cchhhhhcch-hhH-----------
Q 012500 174 LQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDI-SDQASERSIKSIGES--RFLNQLSQFS-QDT----------- 238 (462)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~----------- 238 (462)
|.++..+++++++ . ..+..+.. ..+............ .......... ..+
T Consensus 196 ~~~~~~~~~~~~~-~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (496)
T PRK03893 196 EAEDWKEKHAGKA-P--------------VRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAA 260 (496)
T ss_pred Cchhhhhhccccc-c--------------chhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHH
Confidence 4321110000000 0 00000000 000000000000000 0000000000 000
Q ss_pred ------HHH--hhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhcc
Q 012500 239 ------KVL--LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGA 309 (462)
Q Consensus 239 ------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~ 309 (462)
.+. .+.+.........+...........++|.|+++..|.+..+. .+.+...++.+++.++.|++.||+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~ 340 (496)
T PRK03893 261 IFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGT 340 (496)
T ss_pred HHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 000 000111111111111111122355788999987788886555 44577788889999999999999998
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhc
Q 012500 310 TISNAFKLLSAATFLGAISCLTAFCLS--SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFG 387 (462)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 387 (462)
| +.+..+..+.....+...... +.+.......+.+.......+..+..+.+.+|++.|++++|+.+...+. |
T Consensus 341 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g 414 (496)
T PRK03893 341 R-----KAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGAL-G 414 (496)
T ss_pred h-----HHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhH-H
Confidence 8 665555444433332222222 2222222222222222233445556777888889999999998766655 8
Q ss_pred cccchhHHHHHHhhhcchhHHHHHHHH
Q 012500 388 DVPSSPLVGVLQDHVNNWRKTTLALTS 414 (462)
Q Consensus 388 ~~~~~~~~g~l~~~~g~~~~~~~~~~~ 414 (462)
..++|.+.|.+.|..| +...+.....
T Consensus 415 ~~lgp~l~g~l~~~~g-~~~~~~~~~~ 440 (496)
T PRK03893 415 GALAPILGALIAQRLD-LGTALASLSF 440 (496)
T ss_pred HHHHHHHHHHHhccCC-hHHHHHHHHH
Confidence 8999999999999876 5555544443
No 56
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=7.8e-31 Score=245.79 Aligned_cols=331 Identities=15% Similarity=0.072 Sum_probs=232.9
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhh---hc-----cchhHHHHHHHHHhh
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGC---GS-----SFDFWSIAICRMLVG 96 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~---~~-----~~~~~~l~~~r~l~G 96 (462)
++.|..+.+. ..+.+.++..+++++.|++ ||+||||++..+.+...++.+.. ++ .+|++.+++.|+++|
T Consensus 46 lg~s~~~~g~--~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 123 (392)
T PRK12382 46 LGFGNTMVGI--AVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILG 123 (392)
T ss_pred cCCcHHHHHH--HHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHH
Confidence 7888888666 9999999999999999999 99999999999988877665432 22 358899999999999
Q ss_pred cccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhcccccc
Q 012500 97 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL 176 (462)
Q Consensus 97 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 176 (462)
++.+...+...+++.|++|+|+|++++++.+.+...|..+||++++.+.+.+|||+.+.+..+..++.. ...++.+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~----~~~~~~~ 199 (392)
T PRK12382 124 FGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAW----AFNGTVR 199 (392)
T ss_pred HHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH----HHHHhcc
Confidence 999988888889999999999999999999999999999999999999999999988776654332221 1112111
Q ss_pred CCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHH
Q 012500 177 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA 256 (462)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (462)
+. ++++++ . .+. .+..+.+.+ +. +...+
T Consensus 200 ~~--~~~~~~-~----------------------------------------~~~---~~~~~~~~~-~~-----~~~~l 227 (392)
T PRK12382 200 KV--PAHAGE-R----------------------------------------PSL---WSVVGLIWK-PG-----LGLAL 227 (392)
T ss_pred CC--CCCccc-C----------------------------------------chH---HHHHHHHHH-hH-----HHHHH
Confidence 00 000000 0 000 001111111 11 11222
Q ss_pred HHHHHHHHHHHhhHHHHHHhCCCcchhhhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhh
Q 012500 257 YNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS 336 (462)
Q Consensus 257 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (462)
..........+.|.|+++. +.++.. .......++.+++.+..|++.||+++| +.+..+..+...........+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~ 300 (392)
T PRK12382 228 QGVGFAVIGTFVSLYFASK-GWAMAG-FTLTAFGGAFVLMRVLFGWMPDRFGGV-----KVAIVSLLVETVGLLLLWLAP 300 (392)
T ss_pred HHHHHhHHHHHHHHHHHhc-CCchhH-HHHHHHHHHHHHHHHHHHHHHHhcCCC-----eehHHHHHHHHHHHHHHHHcc
Confidence 3344445567777777663 444322 223445666788899999999999988 555555554444444444445
Q ss_pred hhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHH
Q 012500 337 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF 416 (462)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 416 (462)
+.+..+....+.+++.+...+.......+..|+++|+++.|+.+...+. |..++|.+.|++.|+.| |+..+...+.+.
T Consensus 301 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~ 378 (392)
T PRK12382 301 TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDI-AYGVSGPLAGMLATSFG-YPSVFLAGAISA 378 (392)
T ss_pred cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC-chHHHHHHHHHH
Confidence 5555555666667776666666667778888999999999999766665 88999999999999876 777777777666
Q ss_pred HHHHHHH
Q 012500 417 FLAAGIW 423 (462)
Q Consensus 417 ~~~~~~~ 423 (462)
+++..+.
T Consensus 379 ~~~~~~~ 385 (392)
T PRK12382 379 VLGIIVT 385 (392)
T ss_pred HHHHHHH
Confidence 5555443
No 57
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=9e-31 Score=246.68 Aligned_cols=342 Identities=14% Similarity=0.148 Sum_probs=246.3
Q ss_pred HHHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhh---hccchhHHH
Q 012500 13 GLILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGC---GSSFDFWSI 88 (462)
Q Consensus 13 ~~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~l 88 (462)
+..+|.+ ++ +++.++.+.+. ..+.+.+++.+++++.|++ ||+|||+++..+.++++++.+++ .+++|++.+
T Consensus 46 ~~~~p~i-~~--~~~~s~~~~gl--~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~l 120 (438)
T PRK10133 46 DILLPQF-QQ--AFTLTNFQAGL--IQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLF 120 (438)
T ss_pred HHHHHHH-HH--HhCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 3336755 33 27888888666 9999999999999999999 99999999999999999999885 568999999
Q ss_pred HHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhc------------------c---
Q 012500 89 AICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS------------------H--- 147 (462)
Q Consensus 89 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~------------------~--- 147 (462)
+++|+++|+|.|...+....++.|+.|+++|++.+++.+....+|..+++.+++.+.. .
T Consensus 121 l~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w 200 (438)
T PRK10133 121 LVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAY 200 (438)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHH
Confidence 9999999999999999999999998877777778999999999999999998875430 0
Q ss_pred -----cchHHHHHHHHH-HHHHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhc
Q 012500 148 -----LNWRYAFWGEAI-LMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKS 221 (462)
Q Consensus 148 -----~gwr~~f~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (462)
.+||++|+.... ..++..+..+...||.+. ++++..
T Consensus 201 ~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~-----~~~~~~--------------------------------- 242 (438)
T PRK10133 201 KHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQS-----DNHSDA--------------------------------- 242 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----cccccc---------------------------------
Confidence 256667764333 322222222222233110 000000
Q ss_pred cccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHhCCCcchh-hhhhhHHHhhhhhhhh
Q 012500 222 IGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAG-YNIYHMSNADM-MFGGVTIVCGIVGTIS 299 (462)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 299 (462)
+.++..++.++++++|.++...+..++......+...|.+.|+ ++..|.++... .......++.++++++
T Consensus 243 --------~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~ 314 (438)
T PRK10133 243 --------KQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFT 314 (438)
T ss_pred --------cccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0000112356778899888777767777777777778888885 56678887666 4447778888999999
Q ss_pred hhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHH
Q 012500 300 GGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAIS 379 (462)
Q Consensus 300 ~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (462)
++++.||+++| +.+.....+....++.....++. ..+..+.+.+++.+..+|...+...+..++ +.+++.++.
T Consensus 315 ~g~l~~r~g~~-----~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~l~ 387 (438)
T PRK10133 315 GTWLISRFAPH-----KVLAAYALIAMALCLISAFAGGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSSFI 387 (438)
T ss_pred HHHHHHHcCHH-----HHHHHHHHHHHHHHHHHHHcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccch-hhccchhHH
Confidence 99999999998 66665555554444443333332 335566778889999999999888888755 467778877
Q ss_pred HHHHhhhccccchhHHHHHHhhhcchhHHHHHHHH
Q 012500 380 TVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTS 414 (462)
Q Consensus 380 ~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~ 414 (462)
. ... .|+.++|.+.|.+.|..|+.+..+++...
T Consensus 388 ~-~~~-~g~~~~~~i~G~l~~~~g~~~~~~~v~~~ 420 (438)
T PRK10133 388 V-MTI-IGGGIVTPVMGFVSDAAGNIPTAELIPAL 420 (438)
T ss_pred h-HHh-ccchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 4 333 47888999999999987644455554333
No 58
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00 E-value=9.9e-31 Score=244.11 Aligned_cols=325 Identities=15% Similarity=0.141 Sum_probs=236.0
Q ss_pred HhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 012500 15 ILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRM 93 (462)
Q Consensus 15 ~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 93 (462)
.+|.+.++ ++.++.+.+. ..+.+.++..+++++.|++ ||+|||+++..+.++.+++.+.+.++++++.+++.|+
T Consensus 13 ~~~~~~~~---~~~s~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 87 (377)
T PRK11102 13 ALPVIAAD---FGVSAGSVQM--TLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRF 87 (377)
T ss_pred cHHHHHHH---hCCCHHHHHH--HHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 35544443 7888888665 9999999999999999999 9999999999999999999999999999999999999
Q ss_pred HhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccc
Q 012500 94 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKP 173 (462)
Q Consensus 94 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p 173 (462)
++|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+||+.|++.+++.++..+...+..|
T Consensus 88 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (377)
T PRK11102 88 LHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIP 167 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999899999999998887777666666666
Q ss_pred cccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHH
Q 012500 174 LQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLG 253 (462)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (462)
|++++. ++++. + .++..++.++.++++..+...+.
T Consensus 168 ~~~~~~----~~~~~--------------------~---------------------~~~~~~~~~~~~~~~~~~~~~~~ 202 (377)
T PRK11102 168 ETLPKE----RRQPF--------------------H---------------------LRTTIRNFASLFRHKRVLGYMLA 202 (377)
T ss_pred ccCccc----ccCCC--------------------C---------------------hHHHHHHHHHHHcChHHHHHHHH
Confidence 532210 00000 0 00001245567788887777666
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHH---
Q 012500 254 YIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC--- 329 (462)
Q Consensus 254 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~--- 329 (462)
..+.......+..+.|.++.+.++.++... .......++.+++.++.+++.||+++| +.+..+..+.....
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~~~~~~~~ 277 (377)
T PRK11102 203 SGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGAL-----NMLRFGLWIQFIMGIWL 277 (377)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH-----HHHHHHHHHHHHHHHHH
Confidence 666666666777788888888888886555 444667788889999999999999988 65554443322211
Q ss_pred HHHHHh-hhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHH
Q 012500 330 LTAFCL-SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV 395 (462)
Q Consensus 330 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 395 (462)
...... .+.+.......+...+.+...........+.. |+.++++.++.+.....+|..+++.+.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~g~~~g~~~~ 343 (377)
T PRK11102 278 VVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEF-PHMAGTASSLAGTLRFGIGAIVGALLS 343 (377)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhccc-cccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 12333333333333333333333344444544 578999999987655555666666443
No 59
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=1.6e-31 Score=251.58 Aligned_cols=356 Identities=14% Similarity=0.142 Sum_probs=247.2
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRML 94 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 94 (462)
.|.+.++ ++.++.+.+. +.+.+.++..++.++.|++ ||+|||+++..+.++.+++.++..++++++.+++.|++
T Consensus 40 ~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (398)
T TIGR00895 40 APAISAE---WGLDPVQLGF--LFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFL 114 (398)
T ss_pred HHHHhhc---cCCCHHHHHH--HHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 5544443 6777777555 9999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhcccc
Q 012500 95 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 174 (462)
Q Consensus 95 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 174 (462)
.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+..|||+.|++.+++.++..++.+...||
T Consensus 115 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (398)
T TIGR00895 115 AGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPE 194 (398)
T ss_pred HhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999877776666666666676
Q ss_pred ccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHH
Q 012500 175 QLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGY 254 (462)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (462)
+++...++++++.. +..++.......+ ..+...++.. +. +..++..+..++..+.+..+...+..
T Consensus 195 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~----~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (398)
T TIGR00895 195 SIDFLVSKRPETVR---RIVNAIAPQMQAE-AQSALPEQKA----TQ-------GTKRSVFKALFQGKTARITVLLWLLY 259 (398)
T ss_pred CChHHHhcCHHHHH---HHHHHHHHhcccc-cccccccccc----cc-------chhhHHHHHHhcchhHHHHHHHHHHH
Confidence 54322111100000 0000000000000 0000000000 00 00011111111111223333344444
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHH
Q 012500 255 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 333 (462)
Q Consensus 255 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (462)
++..........+.| ++.+..+.++... .......++.+++.++.+++.||+++| +..............+..
T Consensus 260 ~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~ 333 (398)
T TIGR00895 260 FMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR-----VTALLLLLGAVFAVLVGS 333 (398)
T ss_pred HHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH-----HHHHHHHHHHHHHHHHHH
Confidence 455556667778888 4445567775444 445677888899999999999999986 444433333333333332
Q ss_pred HhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHH
Q 012500 334 CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 398 (462)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l 398 (462)
..++.+..+...++.+++.+...+.......+.+|++.|+++.|+.+...+. |..++|.+.|++
T Consensus 334 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~g~~~~G~l 397 (398)
T TIGR00895 334 TLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRL-GAIIGPILAGYL 397 (398)
T ss_pred HhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHH-HHHHHHHhHHhc
Confidence 2345555666777778888888888888999999999999999999766555 889999888875
No 60
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.98 E-value=1.5e-30 Score=242.46 Aligned_cols=336 Identities=16% Similarity=0.157 Sum_probs=234.0
Q ss_pred HHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHH
Q 012500 14 LILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICR 92 (462)
Q Consensus 14 ~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r 92 (462)
..+|.+.++ ++.++.+.++ ..+.+.++..+++++.|++ ||+|||+++..+.++.+++.+++++++|++.++++|
T Consensus 27 ~~lp~~~~~---~~~s~~~~G~--~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 101 (381)
T PRK03633 27 TLVPLWLAQ---EHLPTWQVGV--VSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWR 101 (381)
T ss_pred HHHHHHHHH---cCCCHHHHHH--HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 346655554 6788888555 9999999999999999999 999999999999999999999999999999999999
Q ss_pred HHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhcc
Q 012500 93 MLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 172 (462)
Q Consensus 93 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 172 (462)
+++|++.+...+.....+.+..++++|++++++++.+.++|..+||.+++.+.+...|+..+. .+..........+...
T Consensus 102 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 180 (381)
T PRK03633 102 FVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWV-TGLVLAAILPLLFTRI 180 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHH-HHHHHHHHHHHHHhcc
Confidence 999999998888888888889999999999999999999999999999999877543333332 2222111111111111
Q ss_pred ccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHH
Q 012500 173 PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL 252 (462)
Q Consensus 173 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (462)
+++ . +++ ++ ..+.++.+++|.++....
T Consensus 181 ~~~--~---~~~-~~-----------------------------------------------~~~~~~~~~~~~~~~~~~ 207 (381)
T PRK03633 181 LNQ--Q---AEN-HD-----------------------------------------------STSIWPMLKLRQARLGVN 207 (381)
T ss_pred cCC--C---CCC-CC-----------------------------------------------CCCHHHHHHhcchHHHHH
Confidence 110 0 000 00 002334567777665544
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHH
Q 012500 253 GYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT 331 (462)
Q Consensus 253 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (462)
..+...........++|.|+++ .+.++... .+.....++.+++++..|++.||+++| +.+..+..+.......
T Consensus 208 ~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~-----~~l~~~~~~~~~~~~~ 281 (381)
T PRK03633 208 GCIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRL-----LVLRVQVFVVILGSIA 281 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcH-----HHHHHHHHHHHHHHHH
Confidence 4444444555666788998877 46665444 344666788899999999999999998 6665554444443332
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHH
Q 012500 332 AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLA 411 (462)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~ 411 (462)
.. .. ........+.+.+.....+.......+..|+++++...+..+...+. |.+++|.+.|++.|+.| +...+..
T Consensus 282 ~~--~~-~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l-G~~igp~~~G~l~~~~g-~~~~f~~ 356 (381)
T PRK03633 282 ML--SQ-AAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTV-GSLLGPSFTAMLMQNYS-DNLLFIM 356 (381)
T ss_pred Hh--hh-HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC-ccHHHHH
Confidence 22 11 12222333444444455666667777888887777777777655555 99999999999999877 6566666
Q ss_pred HHHHHHHH
Q 012500 412 LTSIFFLA 419 (462)
Q Consensus 412 ~~~~~~~~ 419 (462)
.+.+.++.
T Consensus 357 ~~~~~l~~ 364 (381)
T PRK03633 357 IASVSFIY 364 (381)
T ss_pred HHHHHHHH
Confidence 55554433
No 61
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.98 E-value=7.5e-30 Score=238.32 Aligned_cols=331 Identities=14% Similarity=0.112 Sum_probs=247.9
Q ss_pred ccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhc---cchhHHHHHHHHHhhcccc
Q 012500 25 FLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGS---SFDFWSIAICRMLVGVGEA 100 (462)
Q Consensus 25 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~~~g 100 (462)
+++.++.+.+. +.+.+.+++.+++++.|++ ||+|||+++..+.++++++.+++.. .+|++.+++.|++.|+|.|
T Consensus 32 ~~~~s~~~~g~--l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g 109 (410)
T TIGR00885 32 AFTLTAFQAAL--VQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLG 109 (410)
T ss_pred HhCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHH
Confidence 37888888655 9999999999999999999 9999999999999999999988644 4689999999999999999
Q ss_pred cccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhc--------------------------ccchHHHH
Q 012500 101 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS--------------------------HLNWRYAF 154 (462)
Q Consensus 101 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~--------------------------~~gwr~~f 154 (462)
...+....++.+..|+++|++.+++.+...++|..++|.+++.+.. ..+||++|
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~f 189 (410)
T TIGR00885 110 FLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPY 189 (410)
T ss_pred HHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999887742 23699999
Q ss_pred HHHHHHHHHHHHHHhhc-cccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhc
Q 012500 155 WGEAILMLPFAVLAFVI-KPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQ 233 (462)
Q Consensus 155 ~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (462)
++.+++.++..++..+. .|+.++ +++++ . +
T Consensus 190 l~~a~~~~~~~~~~~~~~~p~~~~----~~~~~-~--------------------------------------------~ 220 (410)
T TIGR00885 190 MIIGAVVLAVALLIMLTKMPALNH----SDAKQ-I--------------------------------------------S 220 (410)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCc----ccccc-c--------------------------------------------c
Confidence 99988776655444322 122100 00000 0 0
Q ss_pred chhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHh-CCCcch-hhhhhhHHHhhhhhhhhhhHHHhhhcccc
Q 012500 234 FSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIY-HMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATI 311 (462)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 311 (462)
..++.++++|+|.++...+..+++........++++.|.++.. +.+... ..+......+..+|+++++++.||+++|
T Consensus 221 ~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~- 299 (410)
T TIGR00885 221 FSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAH- 299 (410)
T ss_pred chhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH-
Confidence 0012446778888888777777777777777788999987643 222211 2334555677789999999999999988
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccc
Q 012500 312 SNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPS 391 (462)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 391 (462)
+.+........+..++....++.. ....+.+.+++.+..+|..+....+..+++.+..+.++. +.. .|+++.
T Consensus 300 ----~~l~i~~~~~~~~~ll~~~~~~~~-~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~-~~~--~Gga~~ 371 (410)
T TIGR00885 300 ----KVLMAYAIIGMALCLGSIFAGGHV-GLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLV-MAI--IGGGIV 371 (410)
T ss_pred ----HHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHH-HHH--hccchH
Confidence 777666666666666665544433 356666777888888899999999999877655455554 332 599999
Q ss_pred hhHHHHHHhhh-----cchhHHHHHHHHH
Q 012500 392 SPLVGVLQDHV-----NNWRKTTLALTSI 415 (462)
Q Consensus 392 ~~~~g~l~~~~-----g~~~~~~~~~~~~ 415 (462)
|++.|.+.|.. |+++..|++...+
T Consensus 372 p~l~G~~~d~~~~~~~~~~~~~~~~~~~~ 400 (410)
T TIGR00885 372 PPLQGFIIDMKEIAAAPAVNTSFILPLLC 400 (410)
T ss_pred HHHHHHHHHHhcccccCccchHHHHHHHH
Confidence 99999999964 3465666654433
No 62
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.98 E-value=1.2e-30 Score=245.55 Aligned_cols=400 Identities=13% Similarity=0.075 Sum_probs=292.8
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHH-HHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAI-CRM 93 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~r~ 93 (462)
.+.+.++ ++.+..+ .+|+.+...-...+.+|+.+.+ ||+|.|.+.+.|.++.+++.++.+|++++|++++ .-+
T Consensus 69 ~~~~~~~---f~~s~~~--~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gv 143 (509)
T KOG2504|consen 69 FEELMDY---FGSSSSQ--IAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGV 143 (509)
T ss_pred HHHHHHH---hCCCccH--HHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 4544444 6777777 5669999999999999999999 9999999999999999999999999999999877 568
Q ss_pred HhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccc
Q 012500 94 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKP 173 (462)
Q Consensus 94 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p 173 (462)
+.|+|.|..+.....++..||+ |+|+.+.|+...+.++|..+-|.+...+.+.+|||+.+++.+.+.+-..+....+.|
T Consensus 144 i~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 144 IGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred HhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8999999999999999998887 899999999999999999999999999999999999999999998888887777777
Q ss_pred cccCCCCCccccccccccccccc-----cccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHH
Q 012500 174 LQLKGFAPAESGKAQVVASVSEG-----SEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYV 248 (462)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (462)
..++..++.+++......+.... .....++....+ .........++.+.+.......+....--.++++++.++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl 301 (509)
T KOG2504|consen 223 LSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKK-LSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFL 301 (509)
T ss_pred CCcCCCchhhhhhccccccccccccccccccccCCCCCCc-ccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHH
Confidence 55443222000000000000000 000000000000 000000000000000000000000000013688999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCc-chhhhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHH
Q 012500 249 VNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN-ADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI 327 (462)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 327 (462)
...+...+....+.....++|.|..+ .+.+. ......++.++..++++++.|++.|+...+.. .....+.+...+
T Consensus 302 ~~~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~---~~~~~~ll~~gl 377 (509)
T KOG2504|consen 302 LLALSNLFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRAL---VLFLLTLLIAGL 377 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchH---HHHHHHHHHHHH
Confidence 99999999999999999999999996 45554 44466688899999999999999999884421 344455555555
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhH
Q 012500 328 SCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRK 407 (462)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 407 (462)
..+.....++.+..+....++|++.+.........+.+.++.+.-+.+.|+.....+. +..+||++.|++.|.+|+|..
T Consensus 378 ~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi-~~l~gpPiag~~~d~tg~Y~~ 456 (509)
T KOG2504|consen 378 ARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGI-GALVGPPIAGLLYDITGNYDH 456 (509)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHH-HHHcCcccceeeeeccCCeee
Confidence 5566666677778888888888888877766667888889999999999999555555 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 012500 408 TTLALTSIFFLAAGIWFVGI 427 (462)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~ 427 (462)
.+++.+.+.+.+..+++...
T Consensus 457 ~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 457 AFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred ehhhcChHHHHHHHHHHHhH
Confidence 99999999888887777665
No 63
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.97 E-value=2e-29 Score=235.76 Aligned_cols=344 Identities=10% Similarity=0.055 Sum_probs=223.4
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhH-HHHHHHHHHHHHhhhccchhHHHHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLI-GVGLSVWTFATAGCGSSFDFWSIAICRM 93 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l-~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 93 (462)
+|.++.++ ++.++++.+. ..+...+...+.+++.+.. ||+||||.+ ..+.++.+++..+.+++++++.+++.+.
T Consensus 38 ~~~~l~~~--~~~s~~~~g~--~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 113 (393)
T PRK15011 38 LSIFLTDE--VHARPAMVGF--FFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGV 113 (393)
T ss_pred HHHHHHhh--cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 45444443 6778888655 7776666556666677777 999999875 5666777788888889999998876665
Q ss_pred HhhcccccccccccchhcccCCCCCc--hhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhc
Q 012500 94 LVGVGEASFISLAAPFIDDNAPVPQK--TAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 171 (462)
Q Consensus 94 l~G~~~g~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 171 (462)
+.|...+...|....++.|+.++++| +...++.+.+.++|.++||++++.+.+++|||..|++.++.+++..+..++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 193 (393)
T PRK15011 114 FLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLF 193 (393)
T ss_pred HHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhh
Confidence 55544556788888888888876655 3456888999999999999999999999999999999998887777777776
Q ss_pred cccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHH
Q 012500 172 KPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNV 251 (462)
Q Consensus 172 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (462)
.||.++..+ ++++.. + ..++ +++..+...
T Consensus 194 ~~~~~~~~~--~~~~~~-------------------~----------------------------~~~~--~~~~~~~~~ 222 (393)
T PRK15011 194 LPSMRKELP--LATGTL-------------------E----------------------------APRR--NRRDTLLLF 222 (393)
T ss_pred cCccCCCCc--cccccc-------------------c----------------------------cccc--ccccHHHHH
Confidence 676432110 000000 0 0000 001112222
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHH
Q 012500 252 LGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 330 (462)
Q Consensus 252 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (462)
............+..+.|.|+++.++.++... .+.....+..+++.++.|+++||+++| +.+............
T Consensus 223 ~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~-----~~~~~~~~~~~~~~~ 297 (393)
T PRK15011 223 VICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKR-----FLMRVAAVAGVCFYA 297 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----HHHHHHHHHHHHHHH
Confidence 22233333444556789999988888886554 333445566788899999999999998 555444333333322
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHH
Q 012500 331 TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTL 410 (462)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 410 (462)
.....++.+..+....+.++..+...+.......+..| ++++++.++.+...+. |..++|.+.|.+.|..| ++..+.
T Consensus 298 ~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~l-g~~~g~~l~G~i~~~~g-~~~~~~ 374 (393)
T PRK15011 298 GMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRV-GWIIAGSLAGIVAEIWN-YHAVFW 374 (393)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHH-HHHHHHHHHHHHHHHhh-hHHHHH
Confidence 22233444444444444444444333333344455555 5699999998766665 99999999999999875 666666
Q ss_pred HHHHHHHHHHHH
Q 012500 411 ALTSIFFLAAGI 422 (462)
Q Consensus 411 ~~~~~~~~~~~~ 422 (462)
....+.+++...
T Consensus 375 ~~~~~~~~~~~~ 386 (393)
T PRK15011 375 FALVMIIATLFC 386 (393)
T ss_pred HHHHHHHHHHHH
Confidence 555554444333
No 64
>PRK11043 putative transporter; Provisional
Probab=99.97 E-value=9.3e-30 Score=239.24 Aligned_cols=325 Identities=18% Similarity=0.095 Sum_probs=234.6
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRML 94 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 94 (462)
.|.+.....+++.++.+.+. ..+.+.++..++++++|++ ||+|||+++..+.++..++.++++++++++.+++.|++
T Consensus 26 ~p~~~~i~~~~~~s~~~~g~--~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 103 (401)
T PRK11043 26 LPAFKAIQADLQTSASAVSA--SLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFV 103 (401)
T ss_pred HhhHHHHHHHHCCCHHHHHH--HHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 55443333347888888655 9999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhcccc
Q 012500 95 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 174 (462)
Q Consensus 95 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 174 (462)
+|++.+...+...+++.|++|++++++..+.......+|..++|.+++.+.+++|||+.|++.++..++..+..++. ++
T Consensus 104 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~ 182 (401)
T PRK11043 104 QAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRL-KP 182 (401)
T ss_pred HHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 99998888888888999999999999999999999999999999999999999999999999988877766655444 32
Q ss_pred ccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHH
Q 012500 175 QLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGY 254 (462)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (462)
++++ +++++. ..+++++++++.++...+..
T Consensus 183 ~~~~----~~~~~~----------------------------------------------~~~~~~~~~~~~~~~~~~~~ 212 (401)
T PRK11043 183 SKKA----RKQSQD----------------------------------------------ALTFKQLLKSKTYLGNVLIF 212 (401)
T ss_pred CCCc----cccchH----------------------------------------------HHHHHHHHcChhHHHHHHHH
Confidence 2110 000000 12356677888777665555
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhCCCcchhhh-hhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHH---HHHHHHHH
Q 012500 255 IAYNFVIGAYSYWGPKAGYNIYHMSNADMMF-GGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT---FLGAISCL 330 (462)
Q Consensus 255 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~---~~~~~~~~ 330 (462)
.+.......+..+.|.++++ .|.++..... .....++.+++.+..+++.||+++| +...... .+......
T Consensus 213 ~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~-----~~~~~~~~~~~~~~~~~~ 286 (401)
T PRK11043 213 AACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGE-----QLLPWLLVLFAVSVIAIW 286 (401)
T ss_pred HHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH-----HHHHHHHHHHHHHHHHHH
Confidence 55555556667788988765 6777654433 3444567788888899999999877 4332221 22222111
Q ss_pred HHHH--hhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhh
Q 012500 331 TAFC--LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 401 (462)
Q Consensus 331 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~ 401 (462)
.... .++.+.......+.+++.+..++.......+.. |++++++.|+.+..... +...++.+.|.+.|.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~-~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 287 LASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPF-PQATGKAAALQNTLQLG-LCFLASLLVSALIST 357 (401)
T ss_pred HHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-cccChHHHHHHHHHHHH-HHHHHHHHHHHccCC
Confidence 1111 223333444455566666666666555555555 46799999999765554 667788888888774
No 65
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.97 E-value=1.3e-29 Score=234.42 Aligned_cols=324 Identities=21% Similarity=0.280 Sum_probs=270.1
Q ss_pred HhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 012500 15 ILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRM 93 (462)
Q Consensus 15 ~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 93 (462)
..|.+.++ .+.++.+.+. ..+.+.++..++.++.|++ ||+|||+.+..+.++..++.+...++++++.+++.|+
T Consensus 21 ~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (352)
T cd06174 21 ALPLLAED---LGLSASQAGL--IVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRF 95 (352)
T ss_pred hHHHHHHH---cCCCHHHHHH--HHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 35655544 5777777555 9999999999999999999 9999999999999999999999999999999999999
Q ss_pred HhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccc
Q 012500 94 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKP 173 (462)
Q Consensus 94 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p 173 (462)
+.|++.+...+...+++.|++|+|+|++.+++.+....+|..++|.+++.+.+..+||+.+++.++..++..+...+. |
T Consensus 96 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 174 (352)
T cd06174 96 LLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFL-L 174 (352)
T ss_pred HHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 999999999999999999999999999999999999999999999999999999899999999988776665544332 1
Q ss_pred cccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHH
Q 012500 174 LQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLG 253 (462)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (462)
|.++...+.
T Consensus 175 -----------------------------------------------------------------------~~~~~~~~~ 183 (352)
T cd06174 175 -----------------------------------------------------------------------RLLLLLALA 183 (352)
T ss_pred -----------------------------------------------------------------------HHHHHHHHH
Confidence 344555666
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchh-HHHHHHHHHHHHHHH
Q 012500 254 YIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFK-LLSAATFLGAISCLT 331 (462)
Q Consensus 254 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~~ 331 (462)
.++..........+.|.+.++..+.++... .......++..++.++.+++.||+++| + .+..+..+.......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~~~ 258 (352)
T cd06174 184 FFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRR-----RLLLLIGLLLAALGLLL 258 (352)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hHHHHHHHHHHHHHHHH
Confidence 677777778888899999988777776555 445777888999999999999999998 6 666666666666666
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHH
Q 012500 332 AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLA 411 (462)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~ 411 (462)
....++.+.......+.+++.+...+.......+..|+++|++..|+.+...+. +..++|.+.|.+.|..+ ++..+..
T Consensus 259 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~i~g~l~~~~~-~~~~~~~ 336 (352)
T cd06174 259 LALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSL-GGALGPLLAGLLLDTGG-YGGVFLI 336 (352)
T ss_pred HHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcccC-cchHHHH
Confidence 666666677777888888888888888899999999999999999999766666 89999999999998655 6677777
Q ss_pred HHHHHHHHHHH
Q 012500 412 LTSIFFLAAGI 422 (462)
Q Consensus 412 ~~~~~~~~~~~ 422 (462)
.+.+.+++.+.
T Consensus 337 ~~~~~~i~~i~ 347 (352)
T cd06174 337 LAALALLAALL 347 (352)
T ss_pred HHHHHHHHHHH
Confidence 76665555443
No 66
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.97 E-value=2.5e-29 Score=245.30 Aligned_cols=354 Identities=20% Similarity=0.297 Sum_probs=255.7
Q ss_pred ccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccc------------------
Q 012500 23 KKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSF------------------ 83 (462)
Q Consensus 23 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~------------------ 83 (462)
+.+++++..+.|+ +.+.+.+++++..++.+++ ||+|||+++.++.++++++++++++.+
T Consensus 60 ek~F~lss~~~G~--i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~ 137 (633)
T TIGR00805 60 ERRFKLSTSSSGL--INGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNL 137 (633)
T ss_pred hhhhCCCCCccee--eeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccc
Confidence 3447888888766 9999999999999999999 999999999999999999999988763
Q ss_pred ---------------------------------hhHHHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhh
Q 012500 84 ---------------------------------DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCI 130 (462)
Q Consensus 84 ---------------------------------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~ 130 (462)
.+..++++|+++|+|.+..++...+++.|++|+++|++++++++.+.
T Consensus 138 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~ 217 (633)
T TIGR00805 138 SSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIA 217 (633)
T ss_pred cccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHH
Confidence 24567899999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhHHHHhhccc----------------------chHHHHHHHHHHHHHHHHHHhhccccccCCCCCccccccc
Q 012500 131 PTGVALGYVYGGVVGSHL----------------------NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQ 188 (462)
Q Consensus 131 ~~G~~~g~~~~~~l~~~~----------------------gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 188 (462)
.+|.++|+++++++.+.+ +||..|++.+++.++..+..+ ..|++.+.....++.+..
T Consensus 218 ~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~-~~p~~lp~~~~~~~~~~~ 296 (633)
T TIGR00805 218 VFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFF-FFPKALPKEGKRVNVDVH 296 (633)
T ss_pred HhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH-hCccccCCcccccchhhh
Confidence 999999999999887543 278889998888777766544 445543221100000000
Q ss_pred cccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 012500 189 VVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWG 268 (462)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (462)
+++. .+ +. + ++. .. ......++..+.+++++++|.++...+..++.....+++.+|+
T Consensus 297 -~~~~---~~---~~----~--~~~---~~-------~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~l 353 (633)
T TIGR00805 297 -ETEK---LE---KS----E--DKS---RK-------KNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFL 353 (633)
T ss_pred -hhhc---cc---cc----c--ccc---ch-------hhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 00 00 0 000 00 0001122334567889999999999999999999999999999
Q ss_pred hHHHHHHhCCCcchhhh-hhhHHH-hhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHH---------------
Q 012500 269 PKAGYNIYHMSNADMMF-GGVTIV-CGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT--------------- 331 (462)
Q Consensus 269 p~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 331 (462)
|.|+++.++.++....+ .....+ +.+++.+++|+++||++.+.+...++.....++.......
T Consensus 354 P~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~agv~ 433 (633)
T TIGR00805 354 PKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLLCSPLFLIGCESAPVAGVN 433 (633)
T ss_pred HHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHHHHHHHeecCCCCccceee
Confidence 99999999999766633 333343 5678999999999999865332112222222222111110
Q ss_pred ------------HHH--------h--------------------------------------------------------
Q 012500 332 ------------AFC--------L-------------------------------------------------------- 335 (462)
Q Consensus 332 ------------~~~--------~-------------------------------------------------------- 335 (462)
... .
T Consensus 434 ~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~~~y~~CsCi~~~~~~~a~~g~C~~~ 513 (633)
T TIGR00805 434 NPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSNMVYTNCSCVQTPGNSSAKKGLCNPP 513 (633)
T ss_pred ccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCCCCcceecccccccCCCCCCCcCCCCCcc
Confidence 000 0
Q ss_pred -hh-hHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhh
Q 012500 336 -SS-LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 402 (462)
Q Consensus 336 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~ 402 (462)
++ ...+++..++..+..+....+...++.+.+|+++|+.+.|+.....+.+|.+.+|+++|++.|..
T Consensus 514 C~~~~~~f~~~~~~~~~~~~~~~~p~~~i~lR~V~~~~rs~alg~~~~~~rllg~iP~pi~fG~~iD~s 582 (633)
T TIGR00805 514 CATSLLYFLILFIPLSFIAFITAVPLYMVLLRVVNPEEKSLAIGLQWLCMRVFATIPAPILFGLLIDVS 582 (633)
T ss_pred cchhHHHHHHHHHHHHHHHHhccCchheEEeeccCcccchHHhhHHHHHHHHhcCCChhHHHhhhhhch
Confidence 00 12233444444555567778888999999999999999999999999999999999999999975
No 67
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.97 E-value=1.5e-29 Score=235.67 Aligned_cols=339 Identities=10% Similarity=-0.017 Sum_probs=252.8
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhH----HHHHHHHHHHHHhhhccchhHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLI----GVGLSVWTFATAGCGSSFDFWSIAI 90 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l----~~~~~~~~~~~~~~~~~~~~~~l~~ 90 (462)
+|.+.++ ++.|..+.+. ..+.+.+...+++++.+.+ ||+|||+.. ..+..+..+ ..+..+++++.+++
T Consensus 27 l~~~l~~---~g~s~~~ig~--~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~ 99 (382)
T TIGR00902 27 FPAWLKG---IGLGEEMIGL--LIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSAGAHNAWLLFI 99 (382)
T ss_pred HHHHHHH---cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHHH
Confidence 4455544 7888888666 9999999999999999999 999985433 222222222 24456789999999
Q ss_pred HHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhh
Q 012500 91 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 170 (462)
Q Consensus 91 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 170 (462)
.|+++|.+.+...|...++..++ +++|+++.+......++|.+++|++++.+.+++|||..|++.++.. ...+..+.
T Consensus 100 ~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~-~~~~~~~~ 176 (382)
T TIGR00902 100 AIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGL-AFMLIGFL 176 (382)
T ss_pred HHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHH-HHHHHHHH
Confidence 99999999888889888887665 4789999999999999999999999999999999999998876553 22222333
Q ss_pred ccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHH
Q 012500 171 IKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN 250 (462)
Q Consensus 171 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (462)
..|+.+++. + ++++.. ...++.++++|+|+++..
T Consensus 177 ~~~~~~~~~-~-~~~~~~--------------------------------------------~~~~~~~~~l~~~~~~~~ 210 (382)
T TIGR00902 177 IKPTIPPKD-A-IPEDES--------------------------------------------QGDSAFIALLKNPMNLRF 210 (382)
T ss_pred cCCCCCCCc-c-cccccc--------------------------------------------ccchhHHHHHcChHHHHH
Confidence 322211110 0 000000 001235678899999998
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHH
Q 012500 251 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC 329 (462)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 329 (462)
.+..++.......+..+.|.|+++ .|.++... .......++.+++.++.+++.||++.| +.+..+........
T Consensus 211 l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~-----~~l~~~~~~~~~~~ 284 (382)
T TIGR00902 211 LAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSAR-----DLLLISAIACVGRW 284 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHH-----HHHHHHHHHHHHHH
Confidence 888888888888888899999977 67776555 333556777788888899999999988 77777777777776
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHH
Q 012500 330 LTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTT 409 (462)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~ 409 (462)
......++.+..+....+.++..+...+....++.+. |+++++++.++++.....+|.+++|.+.|++.|+.| + ..+
T Consensus 285 ~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g-~-~~~ 361 (382)
T TIGR00902 285 AIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG-A-GTF 361 (382)
T ss_pred HHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHH
Confidence 6666677878888888899999998888888888877 888899999998655555599999999999999986 4 445
Q ss_pred HHHHHHHHHH
Q 012500 410 LALTSIFFLA 419 (462)
Q Consensus 410 ~~~~~~~~~~ 419 (462)
...+.+.+.+
T Consensus 362 ~~~~~~~~~~ 371 (382)
T TIGR00902 362 VFMAIIAAAA 371 (382)
T ss_pred HHHHHHHHHH
Confidence 5555554433
No 68
>PRK10054 putative transporter; Provisional
Probab=99.97 E-value=1e-29 Score=237.27 Aligned_cols=335 Identities=15% Similarity=0.080 Sum_probs=241.0
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRML 94 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 94 (462)
+|.+++++ ++.++.+.+. ..+.+.++..+.+++.|++ ||+|||+++..+.++.+++.++.++++|++.+++.|++
T Consensus 30 l~~~l~~~--~g~s~~~~g~--~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (395)
T PRK10054 30 MTIYLSRQ--YSLSVDLIGY--AMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFAL 105 (395)
T ss_pred HHHHHHHH--cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 44455443 6788888655 9999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhcccc
Q 012500 95 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 174 (462)
Q Consensus 95 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 174 (462)
.|.+.+...+...++..|.+|+++|++++++.....++|.+++|.+++.+.+ .+||.+|++.++..++..++..+..|+
T Consensus 106 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~ 184 (395)
T PRK10054 106 INCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQR 184 (395)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhc
Confidence 9988887888889999999999999999999999999999999999998875 699999999888776665555555554
Q ss_pred ccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHH
Q 012500 175 QLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGY 254 (462)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (462)
+++.. ++++ . + ..+.++.+++|.++...+..
T Consensus 185 ~~~~~---~~~~-~----------------------------------------~-----~~~~~~~~~~~~~~~~~~~~ 215 (395)
T PRK10054 185 SEKAI---ATET-G----------------------------------------S-----VWSPSVLLQDKALLWFTCSG 215 (395)
T ss_pred ccccc---ccch-h----------------------------------------h-----hhhhhhhccCceehHHHHHH
Confidence 32110 0000 0 0 00124567888888777766
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhCCC--cchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHH
Q 012500 255 IAYNFVIGAYSYWGPKAGYNIYHMS--NADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT 331 (462)
Q Consensus 255 ~~~~~~~~~~~~~~p~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (462)
++.......+..+.+.|.....+.+ .... .......+.........|++.||.++| +.+..+..+.......
T Consensus 216 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~l~~~~~~~~~~~~~ 290 (395)
T PRK10054 216 FLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIR-----PLMTAGTLCFVIGLVG 290 (395)
T ss_pred HHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCch-----hHHHHHHHHHHHHHHH
Confidence 6666665556566777765543332 2222 222333344455566778899998887 6555555444443333
Q ss_pred HHH-hhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHH
Q 012500 332 AFC-LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTL 410 (462)
Q Consensus 332 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 410 (462)
... .++.+...+...+.+++.....+.....+.+..|++.++++.+..+ ..+. |..+||.+.|.+.|+.| +...+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~-G~~~Gp~~~G~l~~~~g-~~~~~~ 367 (395)
T PRK10054 291 FIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWL-GAAINPLVSGVILTTLP-PWSLFV 367 (395)
T ss_pred HHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHH-HHHHHHHHHHHHHHHcC-hhhHHH
Confidence 332 2445445556666667766666666677778888899999988763 4444 89999999999999986 434444
Q ss_pred HH
Q 012500 411 AL 412 (462)
Q Consensus 411 ~~ 412 (462)
..
T Consensus 368 ~~ 369 (395)
T PRK10054 368 IL 369 (395)
T ss_pred HH
Confidence 43
No 69
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.97 E-value=7.3e-30 Score=235.90 Aligned_cols=330 Identities=14% Similarity=0.029 Sum_probs=236.3
Q ss_pred HHHHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHH
Q 012500 12 IGLILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAI 90 (462)
Q Consensus 12 ~~~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 90 (462)
++.++|.+.++ ++.++.+.++ ..+.+.++..+++++.|++ ||+|||+++..+.++..++.+.+ .+++++.+++
T Consensus 19 ~~~~lp~l~~~---~~~s~~~~g~--~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~ 92 (355)
T TIGR00896 19 VGPLLPQIRSA---LGMSFSVAGL--LTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFA 92 (355)
T ss_pred CcccHHHHHHH---hCCCHHHHHH--HHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHH
Confidence 34557765555 7888888666 9999999999999999999 99999999999999988888877 7889999999
Q ss_pred HHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhccc--chHHHHHHHHHHHHHHHHHH
Q 012500 91 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL--NWRYAFWGEAILMLPFAVLA 168 (462)
Q Consensus 91 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~--gwr~~f~~~~~~~~~~~~~~ 168 (462)
.|++.|++.+...+....++.|++| ++|++++++.+.+.++|..+++.+++.+.++. +||+.|...++..++..
T Consensus 93 ~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~--- 168 (355)
T TIGR00896 93 GTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLAL--- 168 (355)
T ss_pred HHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH---
Confidence 9999999999888888889999997 68999999999999999999999998887764 39999988766543322
Q ss_pred hhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHH
Q 012500 169 FVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYV 248 (462)
Q Consensus 169 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (462)
....|+.+++. ++++.. + ....++.+|+|.++
T Consensus 169 ~~~~~~~~~~~---~~~~~~-------------------------------~--------------~~~~~~~~~~~~~~ 200 (355)
T TIGR00896 169 LAWIPQVRRRV---AANQTT-------------------------------T--------------RLTPVRIWRSPLAW 200 (355)
T ss_pred HHHhhhhcccc---CCCCCC-------------------------------C--------------CCCCchhhcCHhHH
Confidence 22234321110 000000 0 00123456778887
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHH
Q 012500 249 VNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI 327 (462)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 327 (462)
...+..++..........|+|.|+++ .+.++... ...+...++.++++++.|++.||+++|+ +.+.....+...
T Consensus 201 ~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~----~~~~~~~~~~~~ 275 (355)
T TIGR00896 201 QVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQR----GIVAVLAVLQLV 275 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccch----HHHHHHHHHHHH
Confidence 77666666666777788899999987 57775554 4557778889999999999999995441 444444444433
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCC-cchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchh
Q 012500 328 SCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-PSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR 406 (462)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 406 (462)
..+......+.... ....+.+++.+...+.......+..+ ++.++...++.+...+. +..++|.+.|++.|+.|+|.
T Consensus 276 ~~~~~~~~~~~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 276 GLCGLLFAPMHGLW-AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYL-LAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred HHHHHHHhhhhHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcccC
Confidence 33333332222222 23445666666665554455544444 46778888887655555 77889999999999988764
No 70
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.97 E-value=2.7e-29 Score=235.55 Aligned_cols=318 Identities=13% Similarity=0.055 Sum_probs=234.7
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccc
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS 104 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 104 (462)
++.++.+.+. ..+.+.++..+++++.|++ ||+|||+++..+.++..++.+++.+++|++.+++.|++.|++.+...+
T Consensus 38 ~~~s~~~~~~--~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~ 115 (394)
T PRK11652 38 LNVREGAVQA--VMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGV 115 (394)
T ss_pred hCCCHHHHHH--HHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHH
Confidence 7888888655 9999999999999999999 999999999999999999999999999999999999999999988888
Q ss_pred cccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCccc
Q 012500 105 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAES 184 (462)
Q Consensus 105 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 184 (462)
....+..|.+++++|++++++.+.+..+|..++|.+++.+.++.|||+.|++.++..++..+...+..||+++.. +
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~----~ 191 (394)
T PRK11652 116 MARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPAD----A 191 (394)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCccc----c
Confidence 888889999999999999999999999999999999999999899999999998877666665555556532110 0
Q ss_pred cccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHH
Q 012500 185 GKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAY 264 (462)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (462)
++. +..+++++.+++|.++...+..+........+
T Consensus 192 -~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (394)
T PRK11652 192 -RRT--------------------------------------------RVLASYRTLLSNRRFNCYLLMLIGTLAGIAVF 226 (394)
T ss_pred -chh--------------------------------------------HHHHHHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 000 00234667778888777666555555555566
Q ss_pred HHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHH-HHHHHHHHHHHHHHH--hhhhHH
Q 012500 265 SYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLS-AATFLGAISCLTAFC--LSSLYG 340 (462)
Q Consensus 265 ~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~ 340 (462)
..+.|.++++.++.++... .......++.+++.++.+++.||.+++ .... ............... ..+.+.
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (394)
T PRK11652 227 EACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTL-----MWQSVICCLLAGLLMWIPGWFGVMNVWT 301 (394)
T ss_pred HHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccccHHH
Confidence 6677888888788876544 333445566677777778888877633 2222 222222222222111 123344
Q ss_pred HHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhh
Q 012500 341 FLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 401 (462)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~ 401 (462)
......+.+++.+...+.......+..| ++++++.++.+..... |..+++.+.+.+.+.
T Consensus 302 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~l-g~~~~~~~~~~~~~~ 360 (394)
T PRK11652 302 LLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNI-GSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHH-HHHHHHHHHHHccCC
Confidence 5555666677777777777777777665 6789999999766555 888888888877654
No 71
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.97 E-value=1e-28 Score=235.98 Aligned_cols=350 Identities=13% Similarity=0.083 Sum_probs=239.7
Q ss_pred HhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-ccc-----CCchh-HHHHHHHHHHHHHhhhcc---ch
Q 012500 15 ILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSH-----NPFRL-IGVGLSVWTFATAGCGSS---FD 84 (462)
Q Consensus 15 ~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~-----Grr~~-l~~~~~~~~~~~~~~~~~---~~ 84 (462)
.+|...++ .+.+..+.+. . +...... +..+++|.+ ||+ ||||. +..+.+..+++..++++. ++
T Consensus 34 ~l~~~l~~---~g~~~~~ig~--~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~ 106 (491)
T PRK11010 34 TLQAWMTV---ENIDLKTIGF--F-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQ 106 (491)
T ss_pred HHHHHHHh---CCCCHHHHHH--H-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcch
Confidence 35655555 4666666554 2 2222222 567788888 888 99985 667888887887777665 47
Q ss_pred hHHHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhc-ccchHHHHHHHHHHHHH
Q 012500 85 FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-HLNWRYAFWGEAILMLP 163 (462)
Q Consensus 85 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-~~gwr~~f~~~~~~~~~ 163 (462)
++.+.+.+++.|++.+...+...+++.|++|++||+++.++...+..+|.++++.++.++.+ ..|||..|++.+++.++
T Consensus 107 l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll 186 (491)
T PRK11010 107 LRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIP 186 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999998 57999999999987766
Q ss_pred HHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhh
Q 012500 164 FAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQ 243 (462)
Q Consensus 164 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (462)
..+..++ .||+++.. ++++.. + +...++++++++
T Consensus 187 ~~l~~~~-~~e~~~~~---~~~~~~------------------------~------------------~~~~~~l~~~~~ 220 (491)
T PRK11010 187 CIIATLL-APEPTDTI---PVPKTL------------------------E------------------QAVVAPLRDFFG 220 (491)
T ss_pred HHHHHHh-cCCCcccc---ccccch------------------------h------------------hhHHHHHHHHHc
Confidence 6554443 45532110 000000 0 000124556777
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchhhhh--hhHHHhhhhhhhhhhHHHhhhccccccchhHHHHH
Q 012500 244 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFG--GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA 321 (462)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 321 (462)
++..+...+..++..........+.+.|+.+..|.++.+.... ....++.+++.+++|+++||+++| +.+...
T Consensus 221 ~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~-----~~l~i~ 295 (491)
T PRK11010 221 RNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLF-----RALMIF 295 (491)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-----HHHHHH
Confidence 7777766665555556666666778888877788887666433 344578899999999999999987 555443
Q ss_pred HHHHHHHH---HHHHHh-hhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHH
Q 012500 322 TFLGAISC---LTAFCL-SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGV 397 (462)
Q Consensus 322 ~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~ 397 (462)
..+..+.. ...... ++.+......++..++.+...+...+...+..+++.+++..++.+...+. |..+++.+.|+
T Consensus 296 ~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~l-g~~~~~~~~G~ 374 (491)
T PRK11010 296 GILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAV-GRVYVGPVAGW 374 (491)
T ss_pred HHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 33222211 111121 23333333334433334444444566677778888899999999766665 87778889999
Q ss_pred HHhhhcchhHHHHHHHHHHHHHHHHHH
Q 012500 398 LQDHVNNWRKTTLALTSIFFLAAGIWF 424 (462)
Q Consensus 398 l~~~~g~~~~~~~~~~~~~~~~~~~~~ 424 (462)
+.|..| |...|.+...+.+.+.+...
T Consensus 375 l~~~~G-~~~~f~~~~~~~l~~l~~~~ 400 (491)
T PRK11010 375 FVEAHG-WPTFYLFSVAAAVPGLLLLL 400 (491)
T ss_pred HHHHhC-hHHHHHHHHHHHHHHHHHHH
Confidence 999876 77777777777666555544
No 72
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.97 E-value=4.7e-29 Score=231.92 Aligned_cols=325 Identities=15% Similarity=0.104 Sum_probs=224.9
Q ss_pred HHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccc-hhHHHHHH
Q 012500 14 LILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSF-DFWSIAIC 91 (462)
Q Consensus 14 ~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~ 91 (462)
..+|.+++++ ++.++.+.++ ..+.+.+++.+++++.|++ ||+|||+++..+.++..++.+++++++ +++.+++.
T Consensus 22 ~~~~~~~~~~--~~~s~~~~~~--~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 97 (366)
T TIGR00886 22 PLAVQMIKDD--LGLSTAQLGN--LVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLL 97 (366)
T ss_pred HhhhHHHHHH--hCCCHHHhhH--hhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 3356434333 7888888655 9999999999999999999 999999999999999999999999999 99999999
Q ss_pred HHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhc----------ccchHHHH-HHHHHH
Q 012500 92 RMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS----------HLNWRYAF-WGEAIL 160 (462)
Q Consensus 92 r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~----------~~gwr~~f-~~~~~~ 160 (462)
|+++|++.+. .+....++.|++|+++|++++++.....++|..+++.+++.+.. +.+||+.| +..+++
T Consensus 98 ~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~ 176 (366)
T TIGR00886 98 RLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGI 176 (366)
T ss_pred HHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHH
Confidence 9999998664 56678899999999999999999998888888888877766554 34899999 444655
Q ss_pred HHHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHH
Q 012500 161 MLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKV 240 (462)
Q Consensus 161 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (462)
..+..++.+...+|++++.++++ +...+ +. ....++ + ..++.++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----------~~----~~~~~~-------~-------------~~~~~~~ 220 (366)
T TIGR00886 177 LLLPALLIFFVGADTPPGKPATG--KLSFK----------GA----RWSVGT-------G-------------ALGDQLK 220 (366)
T ss_pred HHHHHHHHHHhcccCCcccccch--hcccc----------cc----cccccc-------h-------------hHHHHHH
Confidence 55555555555555432210000 00000 00 000000 0 0113445
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHH
Q 012500 241 LLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLS 319 (462)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 319 (462)
.+++|.++...+..++..........+.|.|+++.++.++... .+.....+..++++++.|++.||+++| +...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~ 295 (366)
T TIGR00886 221 VFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGA-----RKLL 295 (366)
T ss_pred HHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccc-----hhHH
Confidence 6788888887777666666677788899999999888886555 345667788889999999999999997 4443
Q ss_pred HHHHHHHHHHH-HHHHhh---hhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhh
Q 012500 320 AATFLGAISCL-TAFCLS---SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 385 (462)
Q Consensus 320 ~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (462)
........... +..... +.+..+....+..++.+...+.......+.. ++++|++.|+.+...+.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~ 364 (366)
T TIGR00886 296 MSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIF-RRATGAVSGLVGAIGNL 364 (366)
T ss_pred HHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhc-hhhcccHHHHHHHhccC
Confidence 33332222222 222112 3444444445555566666666666666655 47899999998655443
No 73
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=9.2e-30 Score=219.88 Aligned_cols=344 Identities=14% Similarity=0.034 Sum_probs=254.4
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccc
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS 104 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 104 (462)
.+.++++ .|++...+.+.+++.+|+.|.+ ||+|+|..+++|++.+..+++++++.+++++++++|.+||+|.++..+
T Consensus 101 ~~~e~~~--iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~t 178 (464)
T KOG3764|consen 101 LDRENTQ--IGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADT 178 (464)
T ss_pred ccccccc--hhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHh
Confidence 4445555 4559999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred cccchhcccCCCC-CchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCcc
Q 012500 105 LAAPFIDDNAPVP-QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAE 183 (462)
Q Consensus 105 ~~~~~i~~~~~~~-~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 183 (462)
.+.++++|.+|++ +|++++|+.-.+.++|.++||++||.+.+..|.+.+|++.+++.++-..+.+++++.+....+ +
T Consensus 179 sglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~--~ 256 (464)
T KOG3764|consen 179 SGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPD--S 256 (464)
T ss_pred hhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcc--c
Confidence 9999999999965 589999999999999999999999999999999999999999999999988888754221110 1
Q ss_pred ccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHH
Q 012500 184 SGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGA 263 (462)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (462)
.++ ..++++++++|..+.........+.....
T Consensus 257 ~~~------------------------------------------------~~~~~~Ll~dP~I~~~agai~~~n~~laf 288 (464)
T KOG3764|consen 257 TEQ------------------------------------------------GTPMWSLLMDPYILLIAGAITFSNSSLAF 288 (464)
T ss_pred ccc------------------------------------------------CccHHHHHhCchHhhhhcchhhccchHHH
Confidence 111 12467889999998887766666666655
Q ss_pred HHHHhhHHHHHHhCCCcchhhhh-hhHHHhhhhhhhhhhHHHhhhccccccchhHH-HHHHHHHHHHHHHHHHhhhhHHH
Q 012500 264 YSYWGPKAGYNIYHMSNADMMFG-GVTIVCGIVGTISGGFILDQMGATISNAFKLL-SAATFLGAISCLTAFCLSSLYGF 341 (462)
Q Consensus 264 ~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 341 (462)
.--.++.+..+....+.-...+. ....+...++..+.|.+.||++... +.+ ..+.+.....+......++....
T Consensus 289 LePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~----wl~~~~gl~~~G~~~~~iP~~~~~~~L 364 (464)
T KOG3764|consen 289 LEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLR----WLLSLGGLATVGVSSGPIPFATSIAQL 364 (464)
T ss_pred hCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchh----HHHHHHHHHHHHHHhchhHhhhhHHHH
Confidence 66667777788777443233333 3456777899999999999999541 222 23333333333333444444333
Q ss_pred HHHH---HHHHHHHHhccccceeeeeccCCcc---hhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHH
Q 012500 342 LALF---TVGELLVFATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 415 (462)
Q Consensus 342 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 415 (462)
++-. ++.+........+...+..+.-..+ ..|...++....... |.++||.++|.+.+..| +.+.....++.
T Consensus 365 ~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sl-a~a~GP~~gg~iv~~iG-F~wl~~iig~~ 442 (464)
T KOG3764|consen 365 WVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSL-AYAIGPTFGGSLVEAIG-FEWLMTIIGIL 442 (464)
T ss_pred hhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHH-hhhccccccchheeehh-HHHHHHHHHHH
Confidence 3333 3333333344445555555554444 678899999756555 99999999999999988 66666555555
Q ss_pred HHHHHHHHHHHH
Q 012500 416 FFLAAGIWFVGI 427 (462)
Q Consensus 416 ~~~~~~~~~~~~ 427 (462)
.+...-++...+
T Consensus 443 n~iyapvl~ll~ 454 (464)
T KOG3764|consen 443 NLIYAPVLLLLR 454 (464)
T ss_pred HHHHHHHHHHHH
Confidence 555444444333
No 74
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.97 E-value=2.6e-28 Score=227.44 Aligned_cols=339 Identities=12% Similarity=0.031 Sum_probs=239.6
Q ss_pred HHHHhh---hhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCc----hhHHHHHHHHHHHHHhhhccc
Q 012500 12 IGLILK---RSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPF----RLIGVGLSVWTFATAGCGSSF 83 (462)
Q Consensus 12 ~~~~~p---~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr----~~l~~~~~~~~~~~~~~~~~~ 83 (462)
.+...| .+.++ ++.+..+.+. ..+.+.++..+++++.|++ ||+||| +.+.++..+. .......++
T Consensus 20 ~g~~~p~l~~~l~~---~g~s~~~iG~--~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~ 92 (382)
T PRK11128 20 YGVFLPFWSVWLKG---QGYTPETIGL--LLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAH 92 (382)
T ss_pred HHHHhhhHHHHHHh---cCCCHHHHHH--HHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcc
Confidence 444444 55554 6888888666 9999999999999999999 999994 3333222222 223344568
Q ss_pred hhHHHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHH
Q 012500 84 DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLP 163 (462)
Q Consensus 84 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~ 163 (462)
+++.+++.|++.|++.+...|...+++.++ +++|+++++......++|.++||++++++.+++|||..|++.++..++
T Consensus 93 ~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~ 170 (382)
T PRK11128 93 SFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVAS 170 (382)
T ss_pred cHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHH
Confidence 899999999999999998899888888876 367888999999999999999999999999999999999988765444
Q ss_pred HHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhh
Q 012500 164 FAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQ 243 (462)
Q Consensus 164 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (462)
..+ ..+..||..+. +++++. . ++..+++++++|
T Consensus 171 ~~~-~~~~~~~~~~~----~~~~~~-----------------------------~-------------~~~~~~~~~i~~ 203 (382)
T PRK11128 171 MLL-GQLLRPTIMPQ----GESRQQ-----------------------------E-------------SAGWPAWKALLK 203 (382)
T ss_pred HHH-HHHccCCCCCc----cccccc-----------------------------c-------------ccccchHHHHHc
Confidence 333 23333432110 000000 0 000124678889
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHH
Q 012500 244 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 322 (462)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 322 (462)
+|.++...+..++..........+.|.|.++ .|.++... .+.....+..++..++.+++.||++++ +.+..+.
T Consensus 204 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-----~~l~~~~ 277 (382)
T PRK11128 204 EPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSAR-----DLLLLSA 277 (382)
T ss_pred ChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH-----HHHHHHH
Confidence 9999988877777766666777788888866 67775444 333555677788888899999999988 6666666
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhh
Q 012500 323 FLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 402 (462)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~ 402 (462)
.............++.+..++..++.+++.+...+....+..+. +++++++..+..+...+..|..++|.+.|.+.|..
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~ 356 (382)
T PRK11128 278 ICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL 356 (382)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 66555555555566677677777777777776666666665554 56667888888864555557789999999999988
Q ss_pred cchhHHHHHHHHH
Q 012500 403 NNWRKTTLALTSI 415 (462)
Q Consensus 403 g~~~~~~~~~~~~ 415 (462)
|. ..++..+++
T Consensus 357 g~--~~~~~~~~~ 367 (382)
T PRK11128 357 GA--GVFWVMALV 367 (382)
T ss_pred cH--HHHHHHHHH
Confidence 73 344444443
No 75
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.97 E-value=7.7e-28 Score=227.70 Aligned_cols=343 Identities=17% Similarity=0.133 Sum_probs=263.2
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhcc-----chhHHHHHHHHHhhccc
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSS-----FDFWSIAICRMLVGVGE 99 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~ 99 (462)
++-|+.. .+++.....+..++.++++|.+ ||++||++++.+.++.++..+..++. .+.+.+++.-++.|++.
T Consensus 40 lt~S~~~--valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~ 117 (524)
T PF05977_consen 40 LTGSPLM--VALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGS 117 (524)
T ss_pred HhCCHHH--HHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHH
Confidence 3444444 5559999999999999999999 99999999999988877665554432 37889999999999999
Q ss_pred ccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccccccCCC
Q 012500 100 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 179 (462)
Q Consensus 100 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 179 (462)
+...|+..+++.|.+|+++...++++.+...++..++||.++|.+....|-.++|.+.++..++.........++..+
T Consensus 118 a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~-- 195 (524)
T PF05977_consen 118 AFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPP-- 195 (524)
T ss_pred HHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc--
Confidence 999999999999999999999999999999999999999999999998899999999987655544433333221100
Q ss_pred CCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHH
Q 012500 180 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF 259 (462)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (462)
++.+++ +..++....++.+.++|.+...++..++.+.
T Consensus 196 --~~~~~e-----------------------------------------~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l 232 (524)
T PF05977_consen 196 --SSLPRE-----------------------------------------RFFSALREGLRYVRSSPPLRSVLLRSFLFNL 232 (524)
T ss_pred --cccchh-----------------------------------------hhhhhHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 000000 1122334467777778877777666666666
Q ss_pred HHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhh
Q 012500 260 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL 338 (462)
Q Consensus 260 ~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (462)
....+...+|.+.++..+.++..+ .+.+..++++++|.++.+++.+|++++ +++..+.+..+...+.....++.
T Consensus 233 ~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~-----~lv~~~~~~~a~~~~~lal~~~~ 307 (524)
T PF05977_consen 233 FASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSR-----RLVLLASLLFALALLLLALSPSF 307 (524)
T ss_pred hhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcc-----hhhHHHHHHHHHHHHHHhcchHH
Confidence 666667778999999888887666 444778888899999988888888776 66666666666666666667778
Q ss_pred HHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHHHH
Q 012500 339 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFL 418 (462)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 418 (462)
+...+.+++.|++.........+......|++.||++++++++.... +..+|..+.|.+.|..| ....+...++..++
T Consensus 308 ~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g-~~~lGsll~G~la~~~g-~~~al~~a~~~lll 385 (524)
T PF05977_consen 308 WLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFG-GMPLGSLLWGFLADHFG-VRTALLIAGAALLL 385 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHH
Confidence 87788888888888888888888899999999999999999766665 88899999999999987 44555555544444
Q ss_pred HHHH
Q 012500 419 AAGI 422 (462)
Q Consensus 419 ~~~~ 422 (462)
+.++
T Consensus 386 ~~~~ 389 (524)
T PF05977_consen 386 SALI 389 (524)
T ss_pred HHHH
Confidence 3333
No 76
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.97 E-value=6.6e-28 Score=256.21 Aligned_cols=329 Identities=12% Similarity=-0.003 Sum_probs=238.7
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhh---ccchhHHHHHHHHHhhccccc
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCG---SSFDFWSIAICRMLVGVGEAS 101 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~g~ 101 (462)
++.+......++..+++.++++++++++|++ ||+|||++++.+.++..+..++.. .+++++.+++.|+++|++.+.
T Consensus 40 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 119 (1146)
T PRK08633 40 YDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAI 119 (1146)
T ss_pred cCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHh
Confidence 3444444445679999999999999999999 999999999998877665555443 457899999999999999999
Q ss_pred ccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcc--------c-chHHHHHHHHHHHHHHHHHHhhcc
Q 012500 102 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH--------L-NWRYAFWGEAILMLPFAVLAFVIK 172 (462)
Q Consensus 102 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~--------~-gwr~~f~~~~~~~~~~~~~~~~~~ 172 (462)
..++..+++.|++|+++|++++++.+.+..+|.++|+.+++++.+. + +|++.+.+..+...+..++..+..
T Consensus 120 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (1146)
T PRK08633 120 YSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRL 199 (1146)
T ss_pred hchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999998875 2 355555444444333334444444
Q ss_pred ccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHH
Q 012500 173 PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL 252 (462)
Q Consensus 173 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (462)
|+.+......++.+.. ...+.....++.+++++.++...+
T Consensus 200 ~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~~~~l~~~~~~~~~~~ 239 (1146)
T PRK08633 200 PKVPAAAPEVFDKKKY----------------------------------------LFPKLLWRNLKLLRSDRVLWLAII 239 (1146)
T ss_pred cCCCCCCccccccccc----------------------------------------ccHHHHHHHHHHHhcCcHHHHHHH
Confidence 5543221110000000 000111235667788888888777
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhCCCcc-hh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHH
Q 012500 253 GYIAYNFVIGAYSYWGPKAGYNIYHMSNA-DM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 330 (462)
Q Consensus 253 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (462)
..++..........++|.|+.+.++.+.. .. .+.+...++.+++.++.+++.||++++ +.+..+.++.++..+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~-----~~~~~~~~~~~~~~~ 314 (1146)
T PRK08633 240 GLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIEL-----GLVPLGALGLALSLF 314 (1146)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEc-----cchhHHHHHHHHHHH
Confidence 77777676777778899999998888865 44 444667788889999999999999877 555444444444444
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHh
Q 012500 331 TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 400 (462)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~ 400 (462)
......+.+..++..++.+++.+...++...++.+..|++.||+++|+.+...+. |.++++.+.+.+..
T Consensus 315 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~l-g~~~~~~~~~~l~~ 383 (1146)
T PRK08633 315 LLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNV-GMLLFLALTTLFSG 383 (1146)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 4444456666666677777777777777788888889999999999999766665 77777766555544
No 77
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.96 E-value=2.6e-28 Score=258.20 Aligned_cols=331 Identities=12% Similarity=-0.044 Sum_probs=240.2
Q ss_pred chhhHHHHHHHHHhhhhhhccc-cccCCchhHHH---HHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccccccchh
Q 012500 35 SSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGV---GLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFI 110 (462)
Q Consensus 35 ~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i 110 (462)
.++..+.+.++++++++++|++ ||+|||+++.. ..+...+..+.....+|+++++++|+++|++.+...|+..+++
T Consensus 54 ~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l 133 (1140)
T PRK06814 54 VTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSIL 133 (1140)
T ss_pred HHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhh
Confidence 4558889999999999999999 99999997533 3333333333344458999999999999999999999999999
Q ss_pred cccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCccccccccc
Q 012500 111 DDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVV 190 (462)
Q Consensus 111 ~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 190 (462)
.+++|+++|++++++.+++.++|.++||++++++.+..+|++.|+..++..++. ++..+.+|+.+.... ..+.+.
T Consensus 134 ~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~--- 208 (1140)
T PRK06814 134 PDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLG-WLASLFIPKTGNAAP-DLKIDR--- 208 (1140)
T ss_pred HhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH-HHHHhhCCCCCCCCC-CCeecc---
Confidence 999999999999999999999999999999999999999999995554444433 334444454321100 000000
Q ss_pred cccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhH
Q 012500 191 ASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPK 270 (462)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 270 (462)
...++....++.+.+++.++...+..++.++....+..++|.
T Consensus 209 --------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 250 (1140)
T PRK06814 209 --------------------------------------NIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPL 250 (1140)
T ss_pred --------------------------------------chHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 000111235777889999999888888887777788889999
Q ss_pred HHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHH---------------
Q 012500 271 AGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC--------------- 334 (462)
Q Consensus 271 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 334 (462)
|+++.++.++... .+.+...++.+++.++.|++.|+..++ +.+..+.++..+..+.+..
T Consensus 251 ~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 325 (1140)
T PRK06814 251 LAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITL-----LYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSI 325 (1140)
T ss_pred HHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceee-----eeehHHHHHHHHHHHHHHhcccccccccccccch
Confidence 9999888886555 444777888899999999999877665 3222222222221111111
Q ss_pred -----hhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHH
Q 012500 335 -----LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTT 409 (462)
Q Consensus 335 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~ 409 (462)
.++.+..++..++.+++.+...++..+.+.+..|++.+|+++|+.++.... +..+++.+.|.+.+...++...+
T Consensus 326 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~-~~~ig~~~~g~l~~~~~~~~~~~ 404 (1140)
T PRK06814 326 LVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAA-FMVAGTIILALLQALGFSIPWII 404 (1140)
T ss_pred hhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHH-HHHHHHHHHHHHHHhccCHHHHH
Confidence 144555566667777777777778889999999999999999999866555 88899999999886544454444
Q ss_pred HHHHH
Q 012500 410 LALTS 414 (462)
Q Consensus 410 ~~~~~ 414 (462)
++.+.
T Consensus 405 ~~~~~ 409 (1140)
T PRK06814 405 LFIAL 409 (1140)
T ss_pred HHHHH
Confidence 43333
No 78
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.96 E-value=2.7e-27 Score=206.29 Aligned_cols=329 Identities=15% Similarity=0.110 Sum_probs=264.7
Q ss_pred HhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhh---ccchhHHHHH
Q 012500 15 ILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCG---SSFDFWSIAI 90 (462)
Q Consensus 15 ~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~l~~ 90 (462)
.+|...+. ++++..+.+. +...+..|+.+.+++.+++ +|+|+|+-++.|+.+++++..+.. ...++..+++
T Consensus 35 Lip~l~~~---f~ls~~~a~l--iqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~ 109 (422)
T COG0738 35 LIPHLKEV---FDLTYFEASL--IQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLV 109 (422)
T ss_pred hHHHHHHH---hCccHHHHHH--HHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHH
Confidence 37755554 7888888656 9999999999999999999 999999999999999999999984 6678999999
Q ss_pred HHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcc-------------------cchH
Q 012500 91 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-------------------LNWR 151 (462)
Q Consensus 91 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-------------------~gwr 151 (462)
+-++.|.|.+...+++..++....|+++..+.+++.+...++|.+++|++++.+..+ ..||
T Consensus 110 ~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~ 189 (422)
T COG0738 110 ALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQ 189 (422)
T ss_pred HHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999998999999999999999999999999987762 2488
Q ss_pred HHHHHHHHHHHHHHHHHhhcc-ccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhh
Q 012500 152 YAFWGEAILMLPFAVLAFVIK-PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQ 230 (462)
Q Consensus 152 ~~f~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (462)
++|...+....++.+...... |+.... .++....
T Consensus 190 ~pYl~~~~~lvll~v~~~~~k~p~~~~~-----~~~~~~~---------------------------------------- 224 (422)
T COG0738 190 FPYLILAGLLVLLAVLILLSKLPDLQVA-----APSLGAS---------------------------------------- 224 (422)
T ss_pred hHHHHHHHHHHHHHHHHHhccCCcCCcc-----ccccccc----------------------------------------
Confidence 899888877666655554443 221111 0000000
Q ss_pred hhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhcc
Q 012500 231 LSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGA 309 (462)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~ 309 (462)
+ .....+++++|+++...++.+++-........|++.|+.+..+.+..+. .+.+..+.+.++|++++.++..|+..
T Consensus 225 -~--~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~ 301 (422)
T COG0738 225 -G--SAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKP 301 (422)
T ss_pred -c--cchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 0 0035678899999999999999999999999999999999878786655 56688899999999999999999988
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccc
Q 012500 310 TISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDV 389 (462)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 389 (462)
. +.+....+.....+......++. ..+....+.+++.+..+|.+.+...+..| ++...+.++. ....+|++
T Consensus 302 ~-----k~Laf~a~~~ill~~~~~l~~g~-v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~~l--~maivGGA 372 (422)
T COG0738 302 E-----KYLAFYALIAILLLLAVALIGGV-VALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSGLL--VMAIVGGA 372 (422)
T ss_pred H-----HHHHHHHHHHHHHHHHHHHhcCh-HHHHHHHHHHHHhHHHHHHHHHHHHhccC-ccccccceee--eeheecch
Confidence 8 88877777777777766666664 44556666788999999999999999998 4444444444 44555999
Q ss_pred cchhHHHHHHhhhcch
Q 012500 390 PSSPLVGVLQDHVNNW 405 (462)
Q Consensus 390 ~~~~~~g~l~~~~g~~ 405 (462)
+-|++.|++.|+.|..
T Consensus 373 iiP~l~G~i~d~~g~~ 388 (422)
T COG0738 373 IIPPLQGVIADMFGIQ 388 (422)
T ss_pred HHHHHHHHHHHhhhhH
Confidence 9999999999998843
No 79
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.96 E-value=5.4e-28 Score=228.40 Aligned_cols=352 Identities=15% Similarity=0.052 Sum_probs=223.3
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhh---ccc-----hhH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCG---SSF-----DFW 86 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~---~~~-----~~~ 86 (462)
+|.+++++ ++.++.+.+. ..+.+.++..+++++.|++ ||+|||+++..+..+.+++..... .++ ...
T Consensus 33 ~~~~l~~~--~g~s~~~~g~--~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (420)
T PRK09528 33 FPIWLHDI--NGLSGTDTGI--IFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILL 108 (420)
T ss_pred HHHHHHHh--cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444443 6778888666 9999999999999999999 999999999887666555443221 111 111
Q ss_pred HHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHH
Q 012500 87 SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAV 166 (462)
Q Consensus 87 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~ 166 (462)
..++++++.|.+.....+....+..+ . ++++++.++......++|..++|.+++.+.+ .+|+++|++.+++.++..+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~ 185 (420)
T PRK09528 109 GAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLV 185 (420)
T ss_pred HHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHH
Confidence 12333444444333333333333222 2 3567888899999999999999999998876 4899999998887776666
Q ss_pred HHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhH
Q 012500 167 LAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKV 246 (462)
Q Consensus 167 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (462)
+.++..|++++..+ ..++. + + +++ +...++.++.+|+|.
T Consensus 186 ~~~~~~~~~~~~~~---~~~~~-------------~------------~--~~~-----------~~~~~~~~~~l~~~~ 224 (420)
T PRK09528 186 LLFFAKPDAPSTAK---VANAL-------------G------------A--NAS-----------AVSLKDALALLKLPK 224 (420)
T ss_pred HHhcccccccchhh---hccch-------------h------------c--ccc-----------cccHHHHHHHccCCC
Confidence 65555443221100 00000 0 0 000 000123556778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhC---CCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHH
Q 012500 247 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYH---MSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 322 (462)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 322 (462)
++...+..............+.|.|+.+..+ .+.... ...++..+...++.++.|++.||+++| +.+....
T Consensus 225 ~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~~~ 299 (420)
T PRK09528 225 FWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAK-----NALLLAG 299 (420)
T ss_pred eEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-----hhhHHHH
Confidence 7766655544444455555567777766542 222222 333555667788999999999999998 6666555
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHH-HHHHHhhhccccchhHHHHHHhh
Q 012500 323 FLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAI-STVSIHIFGDVPSSPLVGVLQDH 401 (462)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~l~~~ 401 (462)
.+......+....++.+..+....+.+...+...+....+..+..|++.+++..+. .++..+ +|.+++|.+.|++.|.
T Consensus 300 ~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-lg~~ig~~~~G~l~~~ 378 (420)
T PRK09528 300 TIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQ-LGAVFLSTLAGNLYDS 378 (420)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHH-HHHHHHHHHHHHHHHh
Confidence 55555544444455666555555566665555555556677788888888887665 444444 4999999999999998
Q ss_pred hcchhHHHHHHHHHHHHHHHH
Q 012500 402 VNNWRKTTLALTSIFFLAAGI 422 (462)
Q Consensus 402 ~g~~~~~~~~~~~~~~~~~~~ 422 (462)
.| |+..+...+.+.++...+
T Consensus 379 ~G-~~~~f~~~~~~~~i~~~~ 398 (420)
T PRK09528 379 IG-FQGTYLILGGIVLLFTLI 398 (420)
T ss_pred hC-chHHHHHHHHHHHHHHHH
Confidence 77 777777766665444433
No 80
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.96 E-value=3.6e-27 Score=221.28 Aligned_cols=338 Identities=10% Similarity=-0.004 Sum_probs=228.9
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCC-chhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhccccccc
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNP-FRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI 103 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Gr-r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~ 103 (462)
++.+..+.|+ +.+.+.++.++++++.|++ ||+|| |+++..+.++.+++..+..+.++++.+++.|++.|++.+...
T Consensus 33 ~g~s~~~iGl--~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 110 (418)
T TIGR00889 33 LHFSGAEIGW--VYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAYMPTI 110 (418)
T ss_pred cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHccHH
Confidence 6888888666 9999999999999999999 99965 778888889998999899999999999999999999877776
Q ss_pred ccccchhc--------ccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccccc
Q 012500 104 SLAAPFID--------DNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 175 (462)
Q Consensus 104 ~~~~~~i~--------~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 175 (462)
+...++.. |......|.+.+| .+|.++||.+++.+....+|+ +|++.++..++..++ .+..||+
T Consensus 111 ~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~-~~~~~e~ 182 (418)
T TIGR00889 111 ALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVF-ALTLPDI 182 (418)
T ss_pred HHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHH-HhcCCCC
Confidence 66555432 2233234555555 368888898888774433455 455666655554443 3445654
Q ss_pred cCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHH
Q 012500 176 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 255 (462)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (462)
++.. ++++.. .. +....+.++++|+|.++...+..+
T Consensus 183 ~~~~---~~~~~~------------------------~~-----------------~~~~~~~~~~~k~~~~~~~~~~~~ 218 (418)
T TIGR00889 183 PVAK---STAKMS------------------------IK-----------------VMLGLDAFILFKNKRMAIFFFFSM 218 (418)
T ss_pred CCCc---cccccC------------------------HH-----------------HHhhhhHHHHhcCCCeeeHHHHHH
Confidence 2110 000000 00 000012445778888877777666
Q ss_pred HHHHHHHHHHHHhhHHHHHHhCCCc--------ch-hhhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHH
Q 012500 256 AYNFVIGAYSYWGPKAGYNIYHMSN--------AD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 326 (462)
Q Consensus 256 ~~~~~~~~~~~~~p~~~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 326 (462)
+..........+.|.++++.. .++ .. ....++..+..+++.+..|++.||+++| +.+..+.++..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r-----~~l~~~~~~~~ 292 (418)
T TIGR00889 219 LLGAPLQITNIFGNGFLHEFG-RNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK-----KVMLLSLVAWA 292 (418)
T ss_pred HHHhHHHHHHHhHHHHHHHhc-ccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHHHHHH
Confidence 665555556677788877643 221 12 2334666777888899999999999998 77776666665
Q ss_pred HHHHHHHHhh-h---hHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhh
Q 012500 327 ISCLTAFCLS-S---LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 402 (462)
Q Consensus 327 ~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~ 402 (462)
+......... + .+..+...++.+++.+...+....++.+..|++.|+++.|+.+...+.+|.+++|.+.|++.|+.
T Consensus 293 v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~ 372 (418)
T TIGR00889 293 LRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKM 372 (418)
T ss_pred HHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 5544333322 1 23344455666666666666667778889999999999999964555558999999999999987
Q ss_pred cc-----hhHHHHHHHHHHHHHHHHH
Q 012500 403 NN-----WRKTTLALTSIFFLAAGIW 423 (462)
Q Consensus 403 g~-----~~~~~~~~~~~~~~~~~~~ 423 (462)
|+ |+..+...+.+.+++.++.
T Consensus 373 g~~~~~~~~~~f~~~~~~~~i~~~l~ 398 (418)
T TIGR00889 373 FAYGTFDWQTMWLFFAGYIAILAVLF 398 (418)
T ss_pred ccccCCchHHHHHHHHHHHHHHHHHH
Confidence 63 7777776666655544433
No 81
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=4.9e-28 Score=233.30 Aligned_cols=388 Identities=14% Similarity=0.122 Sum_probs=254.3
Q ss_pred chhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccccccchhccc
Q 012500 35 SSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDN 113 (462)
Q Consensus 35 ~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~ 113 (462)
.+|+.+.+.++..++++++|++ |++|||+.++++.+++.++++++++++|+++++++|++.|+|.|......+.+++|.
T Consensus 91 ~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEi 170 (513)
T KOG0254|consen 91 QGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEI 170 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhc
Confidence 3779999999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcc-cchHHHHHHHHHHHHHHHHHHhhccccccCCCCCccccccccccc
Q 012500 114 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVAS 192 (462)
Q Consensus 114 ~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 192 (462)
.|++.||...+..+....+|..++..++....+. .+||..+.+..+.+++..+. .++.||+|++..+..+.++ .++
T Consensus 171 ap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~--a~~ 247 (513)
T KOG0254|consen 171 APAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEE--AKR 247 (513)
T ss_pred CChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHH--HHH
Confidence 9999999999999999999999996555555433 58999999999999888888 7778998887644222211 111
Q ss_pred cccccccccccccccccccchhhhhh-hhccccccchhhhhcchhhHHHHhh----hhHHHHHHHHHHHHHHHHHHHHHH
Q 012500 193 VSEGSEASNLNDHVSEDISDQASERS-IKSIGESRFLNQLSQFSQDTKVLLQ----EKVYVVNVLGYIAYNFVIGAYSYW 267 (462)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 267 (462)
....+.... +++...+.++...... +...... ....+.+++ ++......+..+....+.+...+|
T Consensus 248 ~l~~l~g~~-~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y 317 (513)
T KOG0254|consen 248 SLKRLRGLS-PEDVEVELELLKIKLLVEAEVAEG---------KASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYY 317 (513)
T ss_pred HHHHHhCCC-CcchHHHHHHHHHHHHHhhhcccc---------cccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEee
Confidence 111111111 0000111111110000 0000000 001222222 233333333334444445666678
Q ss_pred hhHHHHHHhCCCcchhhhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHh------------
Q 012500 268 GPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL------------ 335 (462)
Q Consensus 268 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 335 (462)
.+.+++.....++. .....+..+..+++.+++.++.||+||| +.++.+.....++..+....
T Consensus 318 ~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr-----~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~ 391 (513)
T KOG0254|consen 318 STTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRR-----KLLLFGAAGMSICLVILAVVGVFALYYPNSSK 391 (513)
T ss_pred hHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHhHHHHHHHHHHHHHHHHHhccCCCccc
Confidence 88887776554433 3344566777788888889999999999 77766665555544433221
Q ss_pred hhhHHHHHHHHHHHHHHHhccccceeee-eccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHH
Q 012500 336 SSLYGFLALFTVGELLVFATQAPVNYVC-LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTS 414 (462)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~ 414 (462)
...+..++..++....+.....++++.+ .|.+|.+.|+.+.++.....+.....+ ......+.+..+ ....+..+..
T Consensus 392 ~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v-~~~~~~~~~~~~-~~~~f~~f~~ 469 (513)
T KOG0254|consen 392 GAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLI-SFFFPFITEALG-IGGTFGYFGG 469 (513)
T ss_pred chhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHH-HHHHHHHHHhcc-ccchHHHHHH
Confidence 1123455566666667777788888755 555666999999999976666644444 445555555433 1123333333
Q ss_pred HHHHHHHHHHHHHhhcc-ccccchhhhcccC
Q 012500 415 IFFLAAGIWFVGIFLKS-IDKFNEDGENQIS 444 (462)
Q Consensus 415 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 444 (462)
........ +.....|| |++..|+.++...
T Consensus 470 ~~~~~~~~-fv~~~~pETkg~sleei~~~~~ 499 (513)
T KOG0254|consen 470 ICLLSLII-FVFFFVPETKGLTLEEINELFE 499 (513)
T ss_pred HHHHHHHH-HheEEcccCCCCcHHHHHHHHH
Confidence 32222221 33345566 7777777666443
No 82
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.96 E-value=3.6e-27 Score=221.13 Aligned_cols=351 Identities=12% Similarity=0.032 Sum_probs=232.7
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhh---hcc-----chhH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGC---GSS-----FDFW 86 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~---~~~-----~~~~ 86 (462)
+|.++.++ ++.++.+.+. ..+.+.++..+++++.|++ ||+|||+.+..+....+++.... .+. +.+.
T Consensus 25 ~~~~~~~~--~g~s~~~~g~--~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (396)
T TIGR00882 25 FPIWLHDV--NGLSKTDTGI--VFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILV 100 (396)
T ss_pred HHHHHHHh--cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 55555544 6778888666 9999999999999999999 99999999988776665544322 122 2234
Q ss_pred HHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHH
Q 012500 87 SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAV 166 (462)
Q Consensus 87 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~ 166 (462)
.+++.|++.|++.+...+....+..|.. +++++.++......++|.++||.+++.+.+ .+||.+|++.+++.++..+
T Consensus 101 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~ 177 (396)
T TIGR00882 101 GAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILML 177 (396)
T ss_pred HHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHH
Confidence 4567788999988888888777776653 344567788888889999999999998865 5999999999888877766
Q ss_pred HHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhH
Q 012500 167 LAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKV 246 (462)
Q Consensus 167 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (462)
+.+...|+++++ ++.+.. . + .+ .+ +...++.++++|+|.
T Consensus 178 ~~~~~~~~~~~~----~~~~~~-~-----------------~---~~---~~-------------~~~~~~~~~~l~~~~ 216 (396)
T TIGR00882 178 LLMFAKPKAPSS----ATVANA-L-----------------G---AN---AS-------------AFSLKLALELFRQRK 216 (396)
T ss_pred HHHHhCCCCchh----hhhhcc-c-----------------c---cc---cC-------------CCCHHHHHHHHcCCc
Confidence 665544442111 000000 0 0 00 00 000124567888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhC---CCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHH
Q 012500 247 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYH---MSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 322 (462)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 322 (462)
++...+..+...........+.|.|+++.++ .+.... ...+...+...++.+..+++.||+++| +.+..+.
T Consensus 217 ~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~-----~~l~~~~ 291 (396)
T TIGR00882 217 FWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAK-----NALLIAG 291 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----hhHHHHH
Confidence 8777666555555555666677888877653 222222 233555667777888999999999998 6666655
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHH-HHHHHhhhccccchhHHHHHHhh
Q 012500 323 FLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAI-STVSIHIFGDVPSSPLVGVLQDH 401 (462)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~l~~~ 401 (462)
.+...........++.+..+...++.+.+.............+..+++.++++.+. .+.... +|++++|.+.|++.|.
T Consensus 292 ~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~-lg~~~~~~l~G~l~~~ 370 (396)
T TIGR00882 292 TIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQ-LAMIFLSTLAGNMYDS 370 (396)
T ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHH-HHHHHHHHhHHHHHHh
Confidence 55555444434455666555555555555444333334455566677777776666 444444 4999999999999998
Q ss_pred hcchhHHHHHHHHHHHHHHH
Q 012500 402 VNNWRKTTLALTSIFFLAAG 421 (462)
Q Consensus 402 ~g~~~~~~~~~~~~~~~~~~ 421 (462)
.| +...+...+++.++..+
T Consensus 371 ~G-~~~~f~~~~~~~~i~~~ 389 (396)
T TIGR00882 371 IG-FQGAYLVLGCIVLLFTL 389 (396)
T ss_pred cc-cHHHHHHHHHHHHHHHH
Confidence 76 77777777666544433
No 83
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.96 E-value=1.4e-26 Score=217.35 Aligned_cols=342 Identities=15% Similarity=0.069 Sum_probs=227.1
Q ss_pred HHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-ccc-----CCch-hHHHHHHHHHHHHHhhhcc---c
Q 012500 14 LILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSH-----NPFR-LIGVGLSVWTFATAGCGSS---F 83 (462)
Q Consensus 14 ~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~-----Grr~-~l~~~~~~~~~~~~~~~~~---~ 83 (462)
..+|.++++ .+.+.++.|. +...... .+..+++|++ ||+ |||| ++..+.++.+++..+.++. +
T Consensus 20 ~~~~~~l~~---~g~~~~~ig~--~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~ 92 (402)
T PRK11902 20 GTLQAWMTV---EGLDIQTIGF--FSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHA 92 (402)
T ss_pred HHHHHHHHH---cCCCHHHHHH--HHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccc
Confidence 337878877 5888888776 5444443 5888999999 999 8876 7888888888888877776 4
Q ss_pred hhHHHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcc-cchHHHHHHHHHHHH
Q 012500 84 DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILML 162 (462)
Q Consensus 84 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-~gwr~~f~~~~~~~~ 162 (462)
+++.+++..++.++..+...++..+++.|++|+|||+++.++...+..+|.++++.+++.+.+. .|||..|++.++..+
T Consensus 93 ~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l 172 (402)
T PRK11902 93 ALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLML 172 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHH
Confidence 5788888888888888889999999999999999999999999999999999999999998885 599999999988776
Q ss_pred HHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHh
Q 012500 163 PFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLL 242 (462)
Q Consensus 163 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (462)
+..+. .+..||+++.. ++++. . .++..+++++++
T Consensus 173 ~~~l~-~~~~~e~~~~~----~~~~~------------------------~-----------------~~~~~~~~~~l~ 206 (402)
T PRK11902 173 AGALT-TLWAPEPEVPA----RPPRS------------------------L-----------------GEAVVGPLRDFF 206 (402)
T ss_pred HHHHH-HHhcCCCcccc----cccch------------------------h-----------------HHHHHHHHHHHH
Confidence 55443 33445432110 00000 0 000123567788
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchhhhh-hh-HHHhhhhhhhhhhHHHhhhccccccchhHHHH
Q 012500 243 QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFG-GV-TIVCGIVGTISGGFILDQMGATISNAFKLLSA 320 (462)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 320 (462)
|+|.++...+..++..........+.+.++.+..|.++....+. .. ..++.+++.++++++.||+++| +.+..
T Consensus 207 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~-----~~l~~ 281 (402)
T PRK11902 207 SRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLY-----RSLML 281 (402)
T ss_pred hCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHH-----HHHHH
Confidence 99988887776666555443333445556677778886655333 23 3345788999999999999987 55544
Q ss_pred HHHHHHHHHH---HHHHh-hhhHHHHHHHHH----HHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccch
Q 012500 321 ATFLGAISCL---TAFCL-SSLYGFLALFTV----GELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 392 (462)
Q Consensus 321 ~~~~~~~~~~---~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 392 (462)
.........+ ..... ++.+.......+ .++..+.........+.+..|.+.+ +..+...+. +...++
T Consensus 282 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l-~~~~~~ 356 (402)
T PRK11902 282 FGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASV-GRVYVG 356 (402)
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHH-HHHHHH
Confidence 4333332221 11222 233433333322 3333444455556666666665544 443323333 555455
Q ss_pred hHHHHHHhhhcchhHHHHHHHHHHHHH
Q 012500 393 PLVGVLQDHVNNWRKTTLALTSIFFLA 419 (462)
Q Consensus 393 ~~~g~l~~~~g~~~~~~~~~~~~~~~~ 419 (462)
.+.|.+.|..| +...+...+.+.+.+
T Consensus 357 ~~~G~l~~~~G-~~~~f~~~~~~~~~~ 382 (402)
T PRK11902 357 PTSGYLVEAYG-WPGFYLMTVVIALPG 382 (402)
T ss_pred HHHHHHHHHhC-hHHHHHHHHHHHHHH
Confidence 68999999987 666566655554443
No 84
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.96 E-value=1.3e-32 Score=262.83 Aligned_cols=380 Identities=18% Similarity=0.201 Sum_probs=247.1
Q ss_pred chhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccc---hhHHHHHHHHHhhcccccccccccchh
Q 012500 35 SSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSF---DFWSIAICRMLVGVGEASFISLAAPFI 110 (462)
Q Consensus 35 ~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~g~~~~~~~~~i 110 (462)
.++..+...+|..+++++.|.+ ||+|||+.+..+.++..+++++.++++ |++.+.++|+++|++.|...+....++
T Consensus 48 ~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~ 127 (451)
T PF00083_consen 48 SSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYI 127 (451)
T ss_pred HHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 5679999999999999999999 999999999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhccc---chHHHHHHHHHHHHHHHHHHhhccccccCCCCCcccccc
Q 012500 111 DDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL---NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKA 187 (462)
Q Consensus 111 ~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~---gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 187 (462)
.|..|+++|++..++.+.+..+|..++..++..+.+.. +||+.+++..+++++..+.. ++.||+|++...+++.++
T Consensus 128 ~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~-~~~pESP~wL~~~~~~~~ 206 (451)
T PF00083_consen 128 SEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLR-FFLPESPRWLLSKGRDEE 206 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccceecccccccc
Confidence 99999999999999999999999999988876664433 49999999998887655544 566999998755544332
Q ss_pred ccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhH-----HHHHHHHHHHHHHHHH
Q 012500 188 QVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKV-----YVVNVLGYIAYNFVIG 262 (462)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 262 (462)
.++..++.++.+.. +++.+++.++.++..+.+ .+++++++++. .....+..+.......
T Consensus 207 --A~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~ 270 (451)
T PF00083_consen 207 --AEKVLRKLRGKEIE---DEEIEEIKAEKKESQESK-----------ASWRDLFRNKKYRKRLLIALLLQFFQQFSGIN 270 (451)
T ss_pred --cccccccccccccc---cccccccccccccccccc-----------eeeeeccccccccccccccccccccccccccc
Confidence 22222222222111 111111111111110000 12334444432 1111121122122233
Q ss_pred HHHHHhhHHHHHHhCCCcchhhhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHH----H-hhh
Q 012500 263 AYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF----C-LSS 337 (462)
Q Consensus 263 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~ 337 (462)
....+.|.++++ .+.+.. ........+...++.+++.++.||+||| +.++.+.....++..... . .++
T Consensus 271 ~~~~~~~~i~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~GRr-----~~~i~~~~~~~~~~~~~~~~~~~~~~~ 343 (451)
T PF00083_consen 271 FIFYYSPSIFEN-AGISNS-FLATLILGLVNFLGTLLAIFLIDRFGRR-----KLLIIGLLLMAICSLILGIIFFLGVSS 343 (451)
T ss_pred cccccccccccc-cccccc-cccccccccccccccccccccccccccc-----ccccccccccccccccccccccccccc
Confidence 445566666555 344433 2233445566777888888999999999 666655555444433332 1 112
Q ss_pred ----hHHHHHHHHHHHHHHHhccccce-eeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHH
Q 012500 338 ----LYGFLALFTVGELLVFATQAPVN-YVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLAL 412 (462)
Q Consensus 338 ----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~ 412 (462)
....++...+.....+.+..+.. .+..|.+|++.|+++.++.....+ ++++++|.+.+.+.+..+.+ ..+.+.
T Consensus 344 ~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~-i~~~i~~~~~~~~~~~~~~~-~~~~i~ 421 (451)
T PF00083_consen 344 SSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGR-IGGFIIPFLFPYLFNNLGGW-GVFLIF 421 (451)
T ss_pred ccccccccceeeeecccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccc-ccchhh
Confidence 22233333333344443444444 566888888999999999965555 48888998888888776533 334444
Q ss_pred HHHHHHHHHHHHHHHhhcc-ccccchhhhcc
Q 012500 413 TSIFFLAAGIWFVGIFLKS-IDKFNEDGENQ 442 (462)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 442 (462)
+.+.++..+ +...+.|| |++..+|.+++
T Consensus 422 ~~~~~i~~i--~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 422 AGVCLIAII--FVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred HHHHHHHHh--heeEEEeeCCCCCHHHHHhh
Confidence 433333222 22346676 77777776653
No 85
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.96 E-value=3.9e-27 Score=217.84 Aligned_cols=316 Identities=13% Similarity=0.071 Sum_probs=225.9
Q ss_pred HHHHHHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-ccc-----CCchh-HHHHHHHHHHHHHhhhcc
Q 012500 10 CLIGLILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSH-----NPFRL-IGVGLSVWTFATAGCGSS 82 (462)
Q Consensus 10 ~~~~~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~-----Grr~~-l~~~~~~~~~~~~~~~~~ 82 (462)
...+..+|.+.++ ++.|.++.+. .... .+...+ .++.|.+ ||+ ||||. ++.+.++.++.....++.
T Consensus 5 ~~~~~~~~~~~~~---~g~s~~~~g~--~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~ 77 (356)
T TIGR00901 5 GLVGNTLPYWLRS---KNVSLKTIGF--FSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFL 77 (356)
T ss_pred hhHHhHHHHHHHH---cCCCHHHHHH--HHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcC
Confidence 3456678877776 6888888666 5433 333333 7777888 886 89996 567788888887777777
Q ss_pred ---chhHHHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccc--------hH
Q 012500 83 ---FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN--------WR 151 (462)
Q Consensus 83 ---~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g--------wr 151 (462)
.+.+.+....++.+++.+...++..+++.|++|+|+|+++.++...+..+|.++++.+++.+.++.+ ||
T Consensus 78 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr 157 (356)
T TIGR00901 78 VPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWG 157 (356)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccH
Confidence 4666777788888998888899999999999999999999999999999999999999999988888 99
Q ss_pred HHHHHHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhh
Q 012500 152 YAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQL 231 (462)
Q Consensus 152 ~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (462)
..|++.++..++..+..++..||+.+. ++++ + . + .
T Consensus 158 ~~f~i~ai~~l~~~~~~~~~~~e~~~~--~~~~-~-~------------------------~-----------------~ 192 (356)
T TIGR00901 158 YIFFWTALLILPGLLVTLFLAKEPQED--ASVP-K-P------------------------L-----------------T 192 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCcc--cccc-h-h------------------------H-----------------H
Confidence 999999987776655555454542111 0000 0 0 0 0
Q ss_pred hcchhhHHHHhhhhH---HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchhh-hhhh-HHHhhhhhhhhhhHHHhh
Q 012500 232 SQFSQDTKVLLQEKV---YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMM-FGGV-TIVCGIVGTISGGFILDQ 306 (462)
Q Consensus 232 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~g~l~d~ 306 (462)
++..++++++++++. ++...+..++..........+.|.|+++ .|.++.+.. .... ..+..+++.++++++.||
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r 271 (356)
T TIGR00901 193 QAVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQP 271 (356)
T ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhh
Confidence 001224556667664 6666666666677777888899999988 777765553 2333 335678899999999999
Q ss_pred hccccccchhHHHHHHHHHHHHHHHHHHh-----------hhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHH
Q 012500 307 MGATISNAFKLLSAATFLGAISCLTAFCL-----------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALS 375 (462)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (462)
+++| +.+....++........... ++.+......++.+++.+...+...++..+..|+++|++.
T Consensus 272 ~g~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~ 346 (356)
T TIGR00901 272 LNIL-----YALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQ 346 (356)
T ss_pred hhHH-----HHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHH
Confidence 9987 55555554444433322221 2234455555666777788888899999999999999999
Q ss_pred HHHHHHHH
Q 012500 376 MAISTVSI 383 (462)
Q Consensus 376 ~~~~~~~~ 383 (462)
.|+.+...
T Consensus 347 ~g~~~~~~ 354 (356)
T TIGR00901 347 MALLSSLS 354 (356)
T ss_pred HHHHHHHH
Confidence 99986544
No 86
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.96 E-value=1.3e-26 Score=220.77 Aligned_cols=333 Identities=14% Similarity=0.103 Sum_probs=234.9
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cc----cCCch-hHHHHHHHHHHHHHhhhccch-----
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CS----HNPFR-LIGVGLSVWTFATAGCGSSFD----- 84 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~----- 84 (462)
++.+..+. ++.++.+.+. +.+...+...+..|+.|++ || +|||| .++.+....+++.+++.+.++
T Consensus 22 l~~~~~~~--~g~s~~~~g~--i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~ 97 (437)
T TIGR00792 22 LLFFYTDV--LGLSAAFVGT--LFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATG 97 (437)
T ss_pred HHHHHHHc--cCCCHHHHHH--HHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcch
Confidence 34344443 6888888666 9999999999999999999 97 67755 677888888888888777654
Q ss_pred -hHHHHHHHHHhhcccccccccccchhcccC-CCCCchhHHHHHHhhhhhhhhhhhhHHHHhh-------cccchHHHHH
Q 012500 85 -FWSIAICRMLVGVGEASFISLAAPFIDDNA-PVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-------SHLNWRYAFW 155 (462)
Q Consensus 85 -~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~-------~~~gwr~~f~ 155 (462)
...+++.+++.+++.+...+...++..|.. +++||++..++.+.+..+|..+++.+.+.+. +..+||+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~ 177 (437)
T TIGR00792 98 KLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFAL 177 (437)
T ss_pred HHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHH
Confidence 456677888999988888888888889987 4689999999999988888877776655444 2468999999
Q ss_pred HHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcch
Q 012500 156 GEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFS 235 (462)
Q Consensus 156 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (462)
+.++++++..+..++..||++++. +++++.. .+..
T Consensus 178 i~~~l~~~~~~~~~~~~~e~~~~~--~~~~~~~-------------------------------------------~~~~ 212 (437)
T TIGR00792 178 VLALIGVVSLIICFFGTKERYSEI--PKNIEKK-------------------------------------------LSLK 212 (437)
T ss_pred HHHHHHHHHHHHHHcCCEecCCCC--CcccccC-------------------------------------------CCHH
Confidence 999888877776666666532110 0000000 0012
Q ss_pred hhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchhhhhhhHHHhhhhhhhhhhHHHhhhccccccch
Q 012500 236 QDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAF 315 (462)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 315 (462)
+.+++++++|.++...+..++..........+.+.|.+...+.+.....+.....++.+++.++.+++.||+++|
T Consensus 213 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~----- 287 (437)
T TIGR00792 213 QIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK----- 287 (437)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----
Confidence 346778899998888777777766666665666666655554332222344556788899999999999999988
Q ss_pred hHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHhccccceeeeeccCC-------cchhhHHHHHHHHHHhhhc
Q 012500 316 KLLSAATFLGAISCLTAFCL-SSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHIFG 387 (462)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~g 387 (462)
+.+..+..+........... ++.+...+..++.+++.+...+...+...+..+ ++.+|.+.|+.+..... |
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~-g 366 (437)
T TIGR00792 288 ILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKL-G 366 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHH-H
Confidence 66655555544444333332 344445555566667766666666666666544 45689999999766665 9
Q ss_pred cccchhHHHHHHhhhc
Q 012500 388 DVPSSPLVGVLQDHVN 403 (462)
Q Consensus 388 ~~~~~~~~g~l~~~~g 403 (462)
..+++.+.|.+.+..|
T Consensus 367 ~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 367 QALAGFLVGLILGIIG 382 (437)
T ss_pred HHHHHHHHHHHHHHcC
Confidence 9999999999998765
No 87
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.96 E-value=2.4e-27 Score=214.11 Aligned_cols=356 Identities=10% Similarity=0.043 Sum_probs=245.9
Q ss_pred HHHHHHHHHHH----------hhhhhhhcccccccccc-ccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHH
Q 012500 5 IHVLLCLIGLI----------LKRSMKKKKFLSLRKLA-AGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVW 72 (462)
Q Consensus 5 i~~~~~~~~~~----------~p~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~ 72 (462)
+..++|++|++ .|.+.+ ++++|+++ .+. +.+.+..++++..++.|.+ ||+|.|+++..+.+.+
T Consensus 28 ~~~~lC~fGF~~e~R~n~s~a~p~L~~---elglT~~qv~G~--I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~W 102 (511)
T TIGR00806 28 LVLYLCFYGFMAQFRPGESFITPYLLT---VLNFTEETVTNE--IIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSF 102 (511)
T ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHH---HcCCCHHHhcch--HHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHH
Confidence 34558888887 453333 37888888 666 9999999999999999999 9999999999999999
Q ss_pred HHHHHhhhccchhHHHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHH
Q 012500 73 TFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRY 152 (462)
Q Consensus 73 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~ 152 (462)
++.+++.++++++..+.+.|++.|+++|+.. +...++..|+|+++|+++.++..++..+|.+++++++++ ...+|||+
T Consensus 103 sl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~ 180 (511)
T TIGR00806 103 VCVWLLLLLGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWIS 180 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchh
Confidence 9999999999999999999999999999999 999999999999999999999999999999999999999 55679997
Q ss_pred HHHHH--HHHHHHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhh
Q 012500 153 AFWGE--AILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQ 230 (462)
Q Consensus 153 ~f~~~--~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (462)
-+.+. .+.+..+.+++-+++|...+..--.++++.. .....+.++.... +. .+. .+.. +......
T Consensus 181 y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~--~~~~~~~~~~~~~----~~-~~~----~~~~--~~~~~~~ 247 (511)
T TIGR00806 181 YSTLNIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVR--GALPCELDQMVPG----PG-GKL----EDYL--GTCRDSF 247 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCchhhhhccccccc--cccccccccCCCC----Cc-ccc----chhh--hhhhhHH
Confidence 66544 2333344444555556332211000000000 0000000000000 00 000 0000 0001123
Q ss_pred hhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcc-hhhhhhhHHHhhhhhhhhhhHHHhhhcc
Q 012500 231 LSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA-DMMFGGVTIVCGIVGTISGGFILDQMGA 309 (462)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~ 309 (462)
.+..+..++...+|+.+..-.+-+.+...+++-+.+|....-++....++. ....-++..+.+.+..+..|++-.++.+
T Consensus 248 ~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~ 327 (511)
T TIGR00806 248 LVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWAR 327 (511)
T ss_pred HHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchh
Confidence 345567788888999888888877777777777777777666554332221 1122244555666677888888655533
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHH
Q 012500 310 TISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSI 383 (462)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (462)
.. ...+.+...+.+.+++++...++.|..++...++...+....+....-+......+.-|...|++++..
T Consensus 328 ~~---~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvA 398 (511)
T TIGR00806 328 WS---KLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVA 398 (511)
T ss_pred hH---HHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHH
Confidence 21 033445555666667777777899999999999888888888877888888887777788888875443
No 88
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=1.4e-26 Score=197.82 Aligned_cols=370 Identities=13% Similarity=0.079 Sum_probs=250.9
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccc
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS 104 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 104 (462)
++.+..+. +++......|..+++..+|.. |++|||+.+.+..+..++...+.+.++|+..+++.|.+.|+|.|+ .|
T Consensus 108 w~~s~~q~--~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~p 184 (528)
T KOG0253|consen 108 WGPSEGQA--PLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LP 184 (528)
T ss_pred hchhhhhh--hHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-cc
Confidence 67777664 449999999999999999999 999999999999999999999999999999999999999999998 88
Q ss_pred cccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCccc
Q 012500 105 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAES 184 (462)
Q Consensus 105 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 184 (462)
...++-.|..|..+|...+-.. ..+.+|.++...++-.+..++||||.....+.+..+.+. ..+..||+++..-.+.+
T Consensus 185 v~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~-f~~w~~ESpRf~~~~G~ 262 (528)
T KOG0253|consen 185 VDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAAR-FLVWVYESPRFYLAKGD 262 (528)
T ss_pred HhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHH-HHhhcccCcchhhhcCC
Confidence 8889999999999999887777 899999999999999999999999999988865544444 45556898886543333
Q ss_pred ccccccccccccccccccc---------------ccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHH-
Q 012500 185 GKAQVVASVSEGSEASNLN---------------DHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYV- 248 (462)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 248 (462)
+.+..+ ..+++.+.+.. ++...++.+......++ ...+...++.....+
T Consensus 263 ~~kAle--tL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke-------------~rg~~~nLlsp~lrkt 327 (528)
T KOG0253|consen 263 DYKALE--TLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKE-------------VRGGTTNLLSPKLRKT 327 (528)
T ss_pred hHHHHH--HHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccc-------------cccchHhhcChHHHHH
Confidence 322111 01111111110 00000111111111111 111222222211111
Q ss_pred --HHHHHHHHHHHHHHHHHHHhh-----------------HHHHHHhC---CCcchhhhhhhHHHhhhhhhhhhhHHHhh
Q 012500 249 --VNVLGYIAYNFVIGAYSYWGP-----------------KAGYNIYH---MSNADMMFGGVTIVCGIVGTISGGFILDQ 306 (462)
Q Consensus 249 --~~~~~~~~~~~~~~~~~~~~p-----------------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 306 (462)
.....++...+.+++...... .+.+...+ .+...+.-..+..+..+.|.++.++++||
T Consensus 328 tlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iver 407 (528)
T KOG0253|consen 328 TLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVER 407 (528)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHH
Confidence 111112333333333333222 22222111 11122222355678889999999999999
Q ss_pred hccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhh
Q 012500 307 MGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIF 386 (462)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (462)
+||| +.+....++..+..+......+.....+..+..-++..+.+...+.+..+.+|+..|+++.|.+..+.+ +
T Consensus 408 lGRK-----kTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaR-I 481 (528)
T KOG0253|consen 408 LGRK-----KTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMAR-I 481 (528)
T ss_pred hcch-----hHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHh-h
Confidence 9999 889888888888888777776666667777777888888899999999999999999999999965545 5
Q ss_pred ccccchhHHHHHHhhhcchhHHHHHHHHHHHHHHHHHH
Q 012500 387 GDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 424 (462)
Q Consensus 387 g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 424 (462)
|+++.|.+. ...+.. ...+..+...+.+.+.++..
T Consensus 482 ggI~~p~iA-~~~e~s--~sl~i~vy~~~~ilagIavc 516 (528)
T KOG0253|consen 482 GGIFSPVIA-MRAELS--TSLPIFVYGALFILAGIAVC 516 (528)
T ss_pred hhhhhhHHH-HHhccc--eeehHHHHHHHHHHHHHHhe
Confidence 999999777 444432 22444455555555444443
No 89
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.95 E-value=1.2e-27 Score=210.65 Aligned_cols=384 Identities=14% Similarity=0.103 Sum_probs=250.6
Q ss_pred hhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccc-------hhHHHHHHHHHhhccccccccccc
Q 012500 36 SVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSF-------DFWSIAICRMLVGVGEASFISLAA 107 (462)
Q Consensus 36 s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~g~~~~~~~ 107 (462)
+.+..+-.+|.++++++.|++ ||+|||+++...++++.+++++++++. -++++...|++.|+|.|+.+|...
T Consensus 87 ~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSA 166 (538)
T KOG0252|consen 87 ALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSA 166 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchH
Confidence 458899999999999999999 999999999999999999999888763 256789999999999999999999
Q ss_pred chhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcc---------------cchHHHHHHHHHHHHHHHHHHhhcc
Q 012500 108 PFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH---------------LNWRYAFWGEAILMLPFAVLAFVIK 172 (462)
Q Consensus 108 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~---------------~gwr~~f~~~~~~~~~~~~~~~~~~ 172 (462)
+..+|....++||...+...+..+.|...|.+++-.+..- .-||..|.+..++++.+....+ .+
T Consensus 167 tI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl-~M 245 (538)
T KOG0252|consen 167 TIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRL-KM 245 (538)
T ss_pred HHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhh-cC
Confidence 9999999999999999999999999998888877665421 1399999998887766544333 33
Q ss_pred ccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHH
Q 012500 173 PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL 252 (462)
Q Consensus 173 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (462)
||+.+.....+++.+...++..+..+. +++++....... ++..+..+.+.+-+.+. .-+.+...+.
T Consensus 246 ~Et~~Y~al~~~~~~~a~~d~~k~~~~---------~~~~~~~~~~~~----~~~~~~~~~F~~~f~~~-hg~~Llgt~~ 311 (538)
T KOG0252|consen 246 PETARYTALVSKKLKQAAGDMKKVLSV---------DIEAESTAESDV----PPPSNSFGLFSRLFLRW-HGKHLLGTAG 311 (538)
T ss_pred CcchhHHHHhhcCHhhhhhcccccccc---------ccchhhccccCC----CCcccccchHHHHHHHH-HHHHHHHHHH
Confidence 776655311111100000111111110 111111100000 00001111111111111 1234455566
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhCCCcchh---------hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHH
Q 012500 253 GYIAYNFVIGAYSYWGPKAGYNIYHMSNADM---------MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 323 (462)
Q Consensus 253 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 323 (462)
.++......+....+....+.+..-.+.... .-..+.....++|..+..+++|++||+ +..+.+..
T Consensus 312 ~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk-----~iq~~GF~ 386 (538)
T KOG0252|consen 312 TWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRK-----YIQLMGFF 386 (538)
T ss_pred HHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhH-----HHHHhhHH
Confidence 6788888888888877777775432221111 111333344466778888999999998 77777777
Q ss_pred HHHHHHHHHHHhhh----hHHHHHHHHHHHHHHHhccc-cceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHH
Q 012500 324 LGAISCLTAFCLSS----LYGFLALFTVGELLVFATQA-PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 398 (462)
Q Consensus 324 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l 398 (462)
+..+..+.+....+ ....+++..+..++...+.. ....+..+.+|.+.|++..|+. ...+-.|++++...+.++
T Consensus 387 ~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIs-AA~GK~GAivg~~~F~~~ 465 (538)
T KOG0252|consen 387 IMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGIS-AASGKAGAIVGAFGFLYL 465 (538)
T ss_pred HHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHH-HHhccchHHHHHHHhhHh
Confidence 77666665554333 23445555665555554444 4444555667779999999999 566767999999999999
Q ss_pred Hh-----hhcchhHHHHHHHHHHHHHHHHHHHHHhhcc-ccccchhhhcccC
Q 012500 399 QD-----HVNNWRKTTLALTSIFFLAAGIWFVGIFLKS-IDKFNEDGENQIS 444 (462)
Q Consensus 399 ~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 444 (462)
.+ ..| ....+++...+.+.+.+..+ .+|| +++..++++++.+
T Consensus 466 t~~~yp~~~g-~~~v~~i~~~~~~~gi~~T~---l~pEtk~~~leei~~e~~ 513 (538)
T KOG0252|consen 466 TDHNYPPNIG-VRNVFIILAGCMLLGILFTL---LIPETKGKSLEEISNEEE 513 (538)
T ss_pred hhccCCcccc-chHHHHHHHHHHHHhHheeE---EeecccccCHHHhcChhh
Confidence 88 444 66777777777666665554 3344 6777766654433
No 90
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.95 E-value=1.5e-26 Score=198.90 Aligned_cols=341 Identities=12% Similarity=-0.012 Sum_probs=217.2
Q ss_pred hhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccccccchhcccC
Q 012500 36 SVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNA 114 (462)
Q Consensus 36 s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~ 114 (462)
+.+.+.|.+++++.++.+|.+ ||+|||+++..+++..++..++.++++|+..++++|++.|+..| ...+..++++|.+
T Consensus 71 GflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg-nl~v~rAiisdV~ 149 (451)
T KOG2615|consen 71 GFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG-NLSVIRAIISDVV 149 (451)
T ss_pred hhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-chHHHHHHHHhhc
Confidence 559999999999999999999 99999999999999999999999999999777778999999998 5556889999999
Q ss_pred CCCCchhHHHHHHhhhhhhhhhhhhHHHHhhc---ccc---hHHHHHHHHHHHHHHHHHHhhccccccCCCCCccccccc
Q 012500 115 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS---HLN---WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQ 188 (462)
Q Consensus 115 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~---~~g---wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 188 (462)
++|+|++.++.....+++|.++||.+|+++.+ ..| .-.+-++..+..........++.||+.+.+++.++....
T Consensus 150 sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~~~~~~~ 229 (451)
T KOG2615|consen 150 SEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKRNDEHSTL 229 (451)
T ss_pred ChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccccchhhcccccch
Confidence 99999999999999999999999999999987 222 111122222222221223344558875543222110000
Q ss_pred cccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhH-------HHHHHHHHHHHHHHH
Q 012500 189 VVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKV-------YVVNVLGYIAYNFVI 261 (462)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 261 (462)
.+....+ .+..+.. ... .. ...||+. ...+.+-.+.+...+
T Consensus 230 ---------~~~~~~~---~~~~~~~--~~~-----------------~v-~~lrn~p~~~~i~~~~i~~l~~~ly~~l~ 277 (451)
T KOG2615|consen 230 ---------QEAADDR---LALLKFA--RIF-----------------KV-AALRNPPLLDFISVLRIFGLHYFLYLELF 277 (451)
T ss_pred ---------hhhhhhh---hhhcchh--hhh-----------------hh-hhhcCccccchHHHHHHHHHHHHHHHHHH
Confidence 0000000 0000000 000 00 1122221 222333344555555
Q ss_pred HHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHH
Q 012500 262 GAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYG 340 (462)
Q Consensus 262 ~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (462)
....++.+.+.++.++.++.+. .+.+..++.. .++.+.+..+..+.+......+.....++....++.........
T Consensus 278 s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m---~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~ 354 (451)
T KOG2615|consen 278 SGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLM---LVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVV 354 (451)
T ss_pred HHHHhhHHHhhcCccCCChhhheeeeehhhHHH---HHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchh
Confidence 5555666656567777776554 2223333333 34444444444433211113344444444445555555555666
Q ss_pred HHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHH
Q 012500 341 FLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALT 413 (462)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~ 413 (462)
......+..+......+.++.+.....|+++||+.+|+...... ++.++||.+.|.+..+..+-+.++....
T Consensus 355 l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~a-laRaiGPlv~g~i~~Ws~~~~~a~~~~~ 426 (451)
T KOG2615|consen 355 LYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGA-LARAIGPLVSGVIFSWSQGAQPAYIAWG 426 (451)
T ss_pred hhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHH-HHHHhhhhhhheeEEEecCCCceeeehH
Confidence 67777777777777888888899999999999999999964444 4999999988888766543333443333
No 91
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.95 E-value=5.5e-25 Score=209.34 Aligned_cols=393 Identities=12% Similarity=0.025 Sum_probs=235.8
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cc-cCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CS-HNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRM 93 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 93 (462)
+|.++.++.+++.++.+.+. ..+.+.++..+++++.|++ || +|||+++..+.++.+++.++.+++++++.++++|+
T Consensus 33 L~~yl~~~~~lg~s~~~ag~--~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 110 (475)
T TIGR00924 33 LAVYLVQQAGLGFSQEQAFI--IFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLG 110 (475)
T ss_pred HHHHHHhCCCCCCCHHHHHH--HHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHH
Confidence 67666554336777777665 9999999999999999999 99 89999999999999999999999999999999999
Q ss_pred HhhcccccccccccchhcccCCCCC---chhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhh
Q 012500 94 LVGVGEASFISLAAPFIDDNAPVPQ---KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 170 (462)
Q Consensus 94 l~G~~~g~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 170 (462)
+.|+|.|...+...++++|++|+++ |++++++++.+.++|.++||.+++++.+++|||+.|++.++..++. ++.++
T Consensus 111 l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~-~l~~~ 189 (475)
T TIGR00924 111 TIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIG-LLTFF 189 (475)
T ss_pred HHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHH-HHHHH
Confidence 9999999999999999999998754 8889999999999999999999999999999999999987654443 33333
Q ss_pred ccccccCCCCCcccccccccccccccccccc---------ccccccccccchhhhhhhhccc-cccchhhhhcchhhHHH
Q 012500 171 IKPLQLKGFAPAESGKAQVVASVSEGSEASN---------LNDHVSEDISDQASERSIKSIG-ESRFLNQLSQFSQDTKV 240 (462)
Q Consensus 171 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 240 (462)
..++..++.++ +++...+++......... ....................-. .....+...+...+..+
T Consensus 190 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (475)
T TIGR00924 190 AGRHMLRDIGS--VPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVA 267 (475)
T ss_pred HcccccccCCC--CCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHH
Confidence 33332221111 110000000000000000 0000000000000000000000 00000000000000001
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcc-----hhhhhhhHHHhhhhhhhhhhHHHhhhccccccch
Q 012500 241 LLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA-----DMMFGGVTIVCGIVGTISGGFILDQMGATISNAF 315 (462)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 315 (462)
-.|...+..+.+...++...+....+.++.+.++..+.+.. ...+.++..+..++..++..++..|..||..+.+
T Consensus 268 ~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~ 347 (475)
T TIGR00924 268 RNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPT 347 (475)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 11222333344444444555555556667666665433311 1133344444445555444444445554321111
Q ss_pred hH--HHHHHHHHHHHHHHHHH---------hhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHh
Q 012500 316 KL--LSAATFLGAISCLTAFC---------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIH 384 (462)
Q Consensus 316 ~~--~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (462)
.. +..+.++.......... ..+.++.+....+.+++.....+.......+..|++.||+.+|+......
T Consensus 348 ~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~ 427 (475)
T TIGR00924 348 TPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQA 427 (475)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 22 23444444433333321 24677778888888999999999999999999999999999999965555
Q ss_pred hhccccchhHHHHHHhhhcchhHHHHHHHHH
Q 012500 385 IFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 415 (462)
Q Consensus 385 ~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 415 (462)
. |..+++.+.....+..+ +...+...+..
T Consensus 428 ~-g~~l~~~~~~~~~~~~~-~~~~~~~~~~~ 456 (475)
T TIGR00924 428 M-GSLLGGYLATFGAVPQG-VTGVFGKIGLV 456 (475)
T ss_pred H-HHHHHHHHHHHHhcccc-hhhHHHHHHHH
Confidence 4 88888877776655433 44444444433
No 92
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.94 E-value=5.3e-25 Score=189.02 Aligned_cols=337 Identities=14% Similarity=0.045 Sum_probs=257.0
Q ss_pred hhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhccc
Q 012500 21 KKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 99 (462)
Q Consensus 21 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 99 (462)
+...++++|.+..+. +.+...+...+.+|+..++ .|+|.++.+..++++.+++.++-... +.+.++.+-.+.|.|.
T Consensus 37 ~Ir~~~gls~s~aGl--LTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G~gI 113 (395)
T COG2807 37 EIRQDLGLSFSVAGL--LTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAGAGI 113 (395)
T ss_pred HHHHHhcccHHHHHH--HHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHhhH
Confidence 333448899888766 9999999999999999999 99999999999999999999999888 8888999999999999
Q ss_pred ccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhccc-chHHHHHHHHHHHHHHHHHHhhccccccCC
Q 012500 100 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIKPLQLKG 178 (462)
Q Consensus 100 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 178 (462)
+......+.++.+.|| |+-+..+|+|....++|..+++.++-.+.++. |||......++++++..+.++ |...++
T Consensus 114 av~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~Wl---Pq~~r~ 189 (395)
T COG2807 114 AVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWL---PQALRE 189 (395)
T ss_pred HHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHh---hhcccc
Confidence 9999999999999999 88999999999999999999999999999887 799999999888776665544 442221
Q ss_pred CCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHH
Q 012500 179 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN 258 (462)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (462)
+....+.+ ..+...++|+|.-|.+.+.+...+
T Consensus 190 ~~~~~~~~------------------------------------------------~~~~~~vw~~~~aW~vtLfmGlqS 221 (395)
T COG2807 190 QAASIATK------------------------------------------------LVSVRKVWRSPLAWQVTLFMGLQS 221 (395)
T ss_pred cccccccc------------------------------------------------cccccccccCchhHHHHHHHHhhH
Confidence 10111100 011235789999999999999999
Q ss_pred HHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhh
Q 012500 259 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS 337 (462)
Q Consensus 259 ~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (462)
..++....|+|.++.|. |.+.+.. .+.+...+..++..+....+.+|...++ +.......+..+..+...+.+.
T Consensus 222 ~~~Y~~~~WLP~ili~~-G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r----~~~~~~~~~~l~G~~G~~~~P~ 296 (395)
T COG2807 222 LLYYIVIGWLPAILIDR-GLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQR----PLVVLALLLMLVGLVGLLLAPG 296 (395)
T ss_pred HHHHHHHHHHHHHHHHc-CCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccc----hHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999985 5665544 5567888899999999999999854431 4444444444443333333332
Q ss_pred hHHHHHHHHHHHHHHHhccccceeeeeccCCc-chhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHH
Q 012500 338 LYGFLALFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF 416 (462)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 416 (462)
...... ..+.|++.+..++.....+.....+ +..+.-.|+.+...+. =...||.+.|++.|.+|+|....+..+.+.
T Consensus 297 ~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYl-lAa~GP~l~G~lhDa~gsw~~~~~~l~~~~ 374 (395)
T COG2807 297 QLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYL-LAAFGPWLFGFLHDATGSWSAPLVLLALAT 374 (395)
T ss_pred hHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHH-HHhhhhhhHhHHHHhcCChHHHHHHHHHHH
Confidence 211111 4667777777777666666665544 6667777777655555 456799999999999999988777666554
Q ss_pred HHH
Q 012500 417 FLA 419 (462)
Q Consensus 417 ~~~ 419 (462)
+..
T Consensus 375 i~m 377 (395)
T COG2807 375 LLM 377 (395)
T ss_pred HHH
Confidence 433
No 93
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.94 E-value=5.4e-25 Score=209.28 Aligned_cols=368 Identities=14% Similarity=0.060 Sum_probs=223.3
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cc-cCCchhHHHHHHHHHHHHHhhhccchhHH-HHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CS-HNPFRLIGVGLSVWTFATAGCGSSFDFWS-IAICR 92 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~-l~~~r 92 (462)
++.+++++ ++.++.+.. ++.+.+.....+..++.|++ || +||||++..+.++++++++.++++++... ++++|
T Consensus 37 l~~yl~~~--lg~~~~~a~--~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~ 112 (489)
T PRK10207 37 LAVFFVKQ--LGFSQEQAF--ITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIAL 112 (489)
T ss_pred HHHHHHHH--cCCCHHHHH--HHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH
Confidence 55565554 667776644 48888888888888999999 99 99999999999999999999999887554 55899
Q ss_pred HHhhcccccccccccchhcccCCCC--CchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhh
Q 012500 93 MLVGVGEASFISLAAPFIDDNAPVP--QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 170 (462)
Q Consensus 93 ~l~G~~~g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 170 (462)
+++|+|.|...|...+++.|.+|++ +|+++++++..+.++|..+||.+++++.+++|||+.|++.++ +++..++.+.
T Consensus 113 ~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i-~~~~~~~~~~ 191 (489)
T PRK10207 113 GTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGA-GLIIALLVYF 191 (489)
T ss_pred HHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH-HHHHHHHHHH
Confidence 9999999999999999999999877 457899999999999999999999999999999999999755 4444444444
Q ss_pred ccccccCCCCCcccccccccccccc----------ccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHH
Q 012500 171 IKPLQLKGFAPAESGKAQVVASVSE----------GSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKV 240 (462)
Q Consensus 171 ~~p~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (462)
..++..++.+++.+++..+...... ......+.. ...........-.....-..++. ...+
T Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~~f~~~~~-----~~~~ 262 (489)
T PRK10207 192 ACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNV----EVANLVLIVLSIVVTIIFFREAF-----KLDK 262 (489)
T ss_pred HcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhh----hHHHHHHHHHHHHHHHHHHHHHh-----cCCH
Confidence 4443322211011000000000000 000000000 00000000000000000000000 0013
Q ss_pred HhhhhHHHHHHHH--HHHHHHHHHHHHHHhhHHHHHHhCCCc-----chhhhhhhHHHhhhhhhhhhhHHHhhhcccccc
Q 012500 241 LLQEKVYVVNVLG--YIAYNFVIGAYSYWGPKAGYNIYHMSN-----ADMMFGGVTIVCGIVGTISGGFILDQMGATISN 313 (462)
Q Consensus 241 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 313 (462)
.+|+|.+....+. .......+....+.+|.+.++..+.+. ....+..+..+..++..++.+++.||+++|...
T Consensus 263 ~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~ 342 (489)
T PRK10207 263 TGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKD 342 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 4455554433322 233333344444666667664332221 111222333455556777788999999887321
Q ss_pred c--hhHHHHHHHHHHHHHHHH-----HHh-----hhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHH
Q 012500 314 A--FKLLSAATFLGAISCLTA-----FCL-----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTV 381 (462)
Q Consensus 314 ~--~~~~~~~~~~~~~~~~~~-----~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (462)
. ..-+..+.++.....+.. ... .+.+..+...++.+.+.....++....+.+..|++.++.++|+.+.
T Consensus 343 ~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l 422 (489)
T PRK10207 343 LSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFL 422 (489)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 1 112233333333222211 111 2345566777888888889999989999999999999999999976
Q ss_pred HHhhhccccchhHHHHH
Q 012500 382 SIHIFGDVPSSPLVGVL 398 (462)
Q Consensus 382 ~~~~~g~~~~~~~~g~l 398 (462)
..+. |+.++..+....
T Consensus 423 ~~~i-g~~lg~~l~~~~ 438 (489)
T PRK10207 423 TQAA-AFLLGGYVATFT 438 (489)
T ss_pred HHHH-HHHHHHHHHHHh
Confidence 6555 777777665444
No 94
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.94 E-value=2.4e-25 Score=216.00 Aligned_cols=342 Identities=14% Similarity=0.105 Sum_probs=226.8
Q ss_pred hhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccccccchhcccC
Q 012500 36 SVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNA 114 (462)
Q Consensus 36 s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~ 114 (462)
.+..+.+.+|.++++.+.|.+ ||+|||++++.++++..++.++.++++|++.+++.|++.|++.+.....+..++.|++
T Consensus 121 ~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~ 200 (521)
T KOG0255|consen 121 ALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIV 200 (521)
T ss_pred HHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeec
Confidence 448899999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCccccccccccccc
Q 012500 115 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVS 194 (462)
Q Consensus 115 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 194 (462)
++++|+.+.++ ......+..++++.++++.+ +||+.+++..+++++..+. +++.||++++...+.+.++..+. .
T Consensus 201 ~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g~~~~a~~~--l 274 (521)
T KOG0255|consen 201 SPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKGRIDEAIKI--L 274 (521)
T ss_pred CcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcCchHHHHHH--H
Confidence 99999999999 77778888888888888887 7999999999988777666 66667888876544443222111 1
Q ss_pred cccccccc-cccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 012500 195 EGSEASNL-NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGY 273 (462)
Q Consensus 195 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 273 (462)
++..+.++ ..+..+..+......+.+. ...+....+..+++.|++....+...+..+.. ...++.-.+..
T Consensus 275 ~~~a~~n~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~-~~~y~gl~~~~ 345 (521)
T KOG0255|consen 275 KKIAKLNGRKLSVKELLRLELLLRPLKL--------LFTEPKISFLDLFRTPRLRYRTLYLLFIWFVF-SLVYYGLSLNV 345 (521)
T ss_pred HHHHhhcCCCCCcHHHHHHHHHhhHhhh--------hccCCCCchhhhhcCHHHHHHHHHHHHHHHHH-hHHHHhhhhhh
Confidence 11111000 0000000111100000000 00000123556667665444433333222222 22222222222
Q ss_pred HHhCCCcchhhhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhH---HHHHHHHHHHH
Q 012500 274 NIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLY---GFLALFTVGEL 350 (462)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 350 (462)
...+.+ ...................+...|++||| ........+..+.++......... .......+..+
T Consensus 346 ~~lg~~--~~~~~~~~~~~~~p~~~~~~~~~~~~gR~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (521)
T KOG0255|consen 346 SGLGGN--IYLNFTLSGLVELPAYFRNGLLLPEFGRR-----PPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKF 418 (521)
T ss_pred hhcCch--HHHHHHHHHHHHhhHHHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHH
Confidence 223333 22222333446666777778999999988 666666666666555555443222 35555555666
Q ss_pred HHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHh
Q 012500 351 LVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 400 (462)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~ 400 (462)
+.+..+........+.+|+..|..+.+..+. .+.++.+++|.+.-....
T Consensus 419 ~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~-~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 419 FIGSAFNLIFLYSAELIPTVVRNTAVGAISA-AARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhh
Confidence 6666666778888889999999999999964 444488888866544433
No 95
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.94 E-value=2e-24 Score=202.08 Aligned_cols=344 Identities=11% Similarity=-0.057 Sum_probs=230.5
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhcc-c-cccCCchhHHHHHHH-HHHHHHhhh---ccch-hHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCS-Q-CSHNPFRLIGVGLSV-WTFATAGCG---SSFD-FWSI 88 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~-l-dr~Grr~~l~~~~~~-~~~~~~~~~---~~~~-~~~l 88 (462)
+|.++++ .+.+.++.|.-.......+...+.+|+.|+ . ||+||||..++.+.+ .++.....+ ..++ ...+
T Consensus 24 lp~~l~~---~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (390)
T TIGR02718 24 LPTLLRE---DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWA 100 (390)
T ss_pred HHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHH
Confidence 5656665 688888877611246668888899999977 6 999999987555433 221122222 2322 3344
Q ss_pred HHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHH
Q 012500 89 AICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLA 168 (462)
Q Consensus 89 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 168 (462)
+..-++.++..+...+....+..|..++++++...+....+..+|.++|+...+++.+++|||..|++.+++.++..+..
T Consensus 101 ~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~ 180 (390)
T TIGR02718 101 VGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCV 180 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 55556666777778888888999999988889999999999999999999999999999999999999998877666665
Q ss_pred hhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHH
Q 012500 169 FVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYV 248 (462)
Q Consensus 169 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (462)
++..|+++++ +++++. ..++.++++|+|.++
T Consensus 181 ~~~~~~~~~~---~~~~~~----------------------------------------------~~~~~~~~l~~~~~~ 211 (390)
T TIGR02718 181 LWLKDRAVAS---PEAPLA----------------------------------------------RRASLFRFFRRPLAW 211 (390)
T ss_pred HHcCCCCcCc---cccchh----------------------------------------------hHHHHHHHHcCcCHH
Confidence 5554332110 000000 012356778888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchhhhh-hhHH-HhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHH
Q 012500 249 VNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFG-GVTI-VCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 326 (462)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 326 (462)
......++..........+.+.|+++ .|.++...... .... ...+++.++.|++.||++++ +.+..+..+..
T Consensus 212 ~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~-----~~l~~~~~~~~ 285 (390)
T TIGR02718 212 SLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLW-----RTFILGVGLAG 285 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHH-----HHHHHHHHHHH
Confidence 77777777777677777788888887 57886655333 3333 45677888999999999988 66655444332
Q ss_pred HHHHHHHHh------hhhHHHHHHHHHHHHHHHhccccceeeeeccCCc-chhhHHHHHHHHHHhhhccccchhHHHHHH
Q 012500 327 ISCLTAFCL------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQ 399 (462)
Q Consensus 327 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~ 399 (462)
......... ++....+....+.++..+...+.......+..++ +.+++..++.+...+. |..++|.+.|.+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l-g~~~g~~~~G~l~ 364 (390)
T TIGR02718 286 SLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDL-GELIASSIAGYLT 364 (390)
T ss_pred HHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 222221111 1122222333333444555555666666666666 8899999999767666 9999999999999
Q ss_pred hhhcchhHHHHHHHHHHHHH
Q 012500 400 DHVNNWRKTTLALTSIFFLA 419 (462)
Q Consensus 400 ~~~g~~~~~~~~~~~~~~~~ 419 (462)
|..| +...+...+.+.+.+
T Consensus 365 ~~~G-~~~~f~~~~~~~l~a 383 (390)
T TIGR02718 365 DRFG-YAGGFLSGTVLAVLA 383 (390)
T ss_pred HHHc-cHHHHHHHHHHHHHH
Confidence 9876 666666655544443
No 96
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.93 E-value=1.3e-23 Score=197.98 Aligned_cols=358 Identities=11% Similarity=0.047 Sum_probs=230.0
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccc
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS 104 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 104 (462)
++-++. .+|+.+.+.++..+..|+.|++ |.||||++++.+.++..+|+++++.++|...++.+..+.|+|.|....
T Consensus 74 iG~~~~---~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~ 150 (599)
T PF06609_consen 74 IGGSDN---WSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQEL 150 (599)
T ss_pred cCCCcc---chHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHH
Confidence 555433 4679999999999999999999 999999999999999999999999999999999999999999886664
Q ss_pred cccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhc-cccccCCCCCcc
Q 012500 105 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI-KPLQLKGFAPAE 183 (462)
Q Consensus 105 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~ 183 (462)
....++|..|.|.|+...++.....-.....++.++..+..+.+|||.|++..+...+..++.+++ .|.+.+..+.++
T Consensus 151 -~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~ 229 (599)
T PF06609_consen 151 -AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGRK 229 (599)
T ss_pred -HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhcccc
Confidence 566689999999999888877776666666788888877777799999999988876665554443 343221111111
Q ss_pred cc-cccccc-ccc-------------ccccccc--ccccccccccch-hhh-------hhhhccccccchhhhhcchhhH
Q 012500 184 SG-KAQVVA-SVS-------------EGSEASN--LNDHVSEDISDQ-ASE-------RSIKSIGESRFLNQLSQFSQDT 238 (462)
Q Consensus 184 ~~-~~~~~~-~~~-------------~~~~~~~--~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~ 238 (462)
.. ++..++ +.. -.++-.. ..++.....-.. .-. .-.+.. ...++..-+
T Consensus 230 ~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~------~~~~~Pl~P- 302 (599)
T PF06609_consen 230 LSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWF------GAPKDPLFP- 302 (599)
T ss_pred CcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhh------ccCCCCcCC-
Confidence 10 100000 000 0000000 000000000000 000 000000 000111122
Q ss_pred HHHhhh-hHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcc---hh-hhhhhHHHhhhhhhhhhhHHHhhhcccccc
Q 012500 239 KVLLQE-KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA---DM-MFGGVTIVCGIVGTISGGFILDQMGATISN 313 (462)
Q Consensus 239 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 313 (462)
.+++|+ |.+...++..++....++....+.|......++.++. .. ........+..++.++.|.+..++++-+
T Consensus 303 ~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~K-- 380 (599)
T PF06609_consen 303 HRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIK-- 380 (599)
T ss_pred HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchh--
Confidence 357776 5565556666677777778778888888877776643 22 3445566777788888899988887541
Q ss_pred chhHHHHHHHHHHHHHHHH--HHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccc
Q 012500 314 AFKLLSAATFLGAISCLTA--FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPS 391 (462)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 391 (462)
+.++.+..+....+..+ ...++....+...++.+++.+....+......-..|++.-+++.|+. ...+.+|+.++
T Consensus 381 --w~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~-~s~R~~GGsIg 457 (599)
T PF06609_consen 381 --WQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLT-GSIRSIGGSIG 457 (599)
T ss_pred --HHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHH-HHHHHHhhHHH
Confidence 33334443333322222 22334455567777788888877767777777778889999999999 45555588888
Q ss_pred hhHHHHHH
Q 012500 392 SPLVGVLQ 399 (462)
Q Consensus 392 ~~~~g~l~ 399 (462)
..++..+.
T Consensus 458 ~aIy~~I~ 465 (599)
T PF06609_consen 458 YAIYNAIF 465 (599)
T ss_pred HHHHHHHH
Confidence 76665443
No 97
>PTZ00207 hypothetical protein; Provisional
Probab=99.92 E-value=5.5e-24 Score=201.99 Aligned_cols=399 Identities=12% Similarity=-0.024 Sum_probs=250.2
Q ss_pred HhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhcc------chhHH
Q 012500 15 ILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSS------FDFWS 87 (462)
Q Consensus 15 ~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~------~~~~~ 87 (462)
..|.+.++ ++.++.+.+. +.+.. ......++++|++ ||+|||+++.++.++++++.++++++ ++++.
T Consensus 49 ~s~~L~~~---lgls~~~l~~--i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~ 122 (591)
T PTZ00207 49 ISGAMQAR---YNLTQRDLST--ITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVR 122 (591)
T ss_pred HHHHHHHH---hCcCHHHHHH--HHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHH
Confidence 34544333 7788887555 55542 3334567788999 99999999999999999999999997 68999
Q ss_pred HHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhh-hhhHHHHhhcccchHHHHHHHHHHHHHHHH
Q 012500 88 IAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVAL-GYVYGGVVGSHLNWRYAFWGEAILMLPFAV 166 (462)
Q Consensus 88 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~-g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~ 166 (462)
+++.|++.|+|.+...+.....+.+|+| ++||++.|+...+.++|.++ +++..+++. .+|+..|++.+++.++..+
T Consensus 123 l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv~l 199 (591)
T PTZ00207 123 LSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVVGI 199 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999997 88999999999999999976 454455544 3699999999999888888
Q ss_pred HHhhccccccCCC---CC---cccccccc---------c-----c---------------------c---cc-c------
Q 012500 167 LAFVIKPLQLKGF---AP---AESGKAQV---------V-----A---------------------S---VS-E------ 195 (462)
Q Consensus 167 ~~~~~~p~~~~~~---~~---~~~~~~~~---------~-----~---------------------~---~~-~------ 195 (462)
+.+.++++.+... ++ +++++... + . + .. .
T Consensus 200 l~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~ 279 (591)
T PTZ00207 200 LAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGF 279 (591)
T ss_pred HHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 7777663332211 00 01111000 0 0 0 00 0
Q ss_pred -------------------cccccccccccc----ccccchhhhhhhhcc-ccccchhhhhcchhhHHHHhhhhHHHHHH
Q 012500 196 -------------------GSEASNLNDHVS----EDISDQASERSIKSI-GESRFLNQLSQFSQDTKVLLQEKVYVVNV 251 (462)
Q Consensus 196 -------------------~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (462)
..+..+++++.+ +..+++.+...++.. ..............++++.+++..+|.+.
T Consensus 280 ~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~ 359 (591)
T PTZ00207 280 AVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLL 359 (591)
T ss_pred HHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHH
Confidence 000000000000 000000000000000 00000001011122778888999999999
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhCC-Ccc--hhhhhhhHHHhhhhhhhhhhHHHhhhccccc---cchhHHHHHHHHH
Q 012500 252 LGYIAYNFVIGAYSYWGPKAGYNIYHM-SNA--DMMFGGVTIVCGIVGTISGGFILDQMGATIS---NAFKLLSAATFLG 325 (462)
Q Consensus 252 ~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~---~~~~~~~~~~~~~ 325 (462)
...++.......+...+..+.+...|. ... ...+.++.++.+.+|++..|++.....+|.. -.|........++
T Consensus 360 ~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~~ 439 (591)
T PTZ00207 360 WSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSVC 439 (591)
T ss_pred HHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHHH
Confidence 988888777666667777777776344 222 2236688899999999999998833333321 1122222222223
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccc-hhHHHHHHhhhc-
Q 012500 326 AISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPS-SPLVGVLQDHVN- 403 (462)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~g~l~~~~g- 403 (462)
.+..+++....+....++..++.|++.|..++.....+.+.+. ++-|+-.-+.. ..+.+|+.+- -.+.|.++|+-.
T Consensus 440 ~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~-~a~pigs~~~n~~l~G~~Yd~ea~ 517 (591)
T PTZ00207 440 IITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCF-LGSVLSAIFLNRLLYGEWYTQQAD 517 (591)
T ss_pred HHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHh-HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333333333232567788888999999999988888888888 77787777763 3344355443 557788887642
Q ss_pred -----------chhHHHHHHHHHHHHHHHHHH
Q 012500 404 -----------NWRKTTLALTSIFFLAAGIWF 424 (462)
Q Consensus 404 -----------~~~~~~~~~~~~~~~~~~~~~ 424 (462)
=+..++++++++.+.+.++..
T Consensus 518 k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~ 549 (591)
T PTZ00207 518 KLGQDVCTERVCVVMPLAFLLGLSFLAFITST 549 (591)
T ss_pred hCCCCeeCCceeeHhHHHHHHHHHHHHHHHHh
Confidence 145677777777666655443
No 98
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.92 E-value=1.6e-22 Score=191.68 Aligned_cols=358 Identities=19% Similarity=0.329 Sum_probs=268.4
Q ss_pred hhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccc--------------
Q 012500 19 SMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSF-------------- 83 (462)
Q Consensus 19 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~-------------- 83 (462)
+...+..++++.++.|. +.+.+-++..+...+..++ .|..|-+++-.|.++++++++++++-+
T Consensus 120 IttiErRF~i~Ss~sG~--I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~ 197 (735)
T KOG3626|consen 120 ITTIERRFKISSSQSGL--IASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIK 197 (735)
T ss_pred hhhhhhhcCCCCCccee--EeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhh
Confidence 33556668888888666 9999999999999999999 999999999999999999999988641
Q ss_pred -----------------------------------h--hH-HHHHHHHHhhcccccccccccchhcccCCCCCchhHHHH
Q 012500 84 -----------------------------------D--FW-SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSM 125 (462)
Q Consensus 84 -----------------------------------~--~~-~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~ 125 (462)
+ ++ .++++.++.|+|....++.+.+|+-|...+++-+..+|+
T Consensus 198 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi 277 (735)
T KOG3626|consen 198 QSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGI 277 (735)
T ss_pred ccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHH
Confidence 0 22 567799999999999999999999999999999999999
Q ss_pred HHhhhhhhhhhhhhHHHHhhccc-------------------chHHHHHHHHHHHHHHHHHHhhccccccCCCCCccccc
Q 012500 126 FYMCIPTGVALGYVYGGVVGSHL-------------------NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGK 186 (462)
Q Consensus 126 ~~~~~~~G~~~g~~~~~~l~~~~-------------------gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 186 (462)
......+|.++|.++++++...+ .|..-|++.+.+.+...+..+++ |+..+...++.+.+
T Consensus 278 ~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~f-Pk~lp~~~~~~~~~ 356 (735)
T KOG3626|consen 278 LYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFF-PKELPKSQKRKRAR 356 (735)
T ss_pred HHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhC-cccCccccccchhh
Confidence 99999999999999999877421 27777888888777777766665 54433221110000
Q ss_pred cccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Q 012500 187 AQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSY 266 (462)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (462)
.. + ..+++.+ ..+......+..+++.+..+++++||.+...+++..+....+.++.+
T Consensus 357 ~~---------~----------~~k~~~~----~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~t 413 (735)
T KOG3626|consen 357 DL---------H----------VLKTESG----GAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYIT 413 (735)
T ss_pred hh---------c----------ccccccc----cccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHH
Confidence 00 0 0000000 01111122245567788899999999999999999999999999999
Q ss_pred HhhHHHHHHhCCCcchh--hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHH----------
Q 012500 267 WGPKAGYNIYHMSNADM--MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC---------- 334 (462)
Q Consensus 267 ~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 334 (462)
|+|.|++++++.++..+ ....+...+..+|.+++|++.+|+..+.+...++.++..++........++
T Consensus 414 FlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~~~~~~~igC~~~~~aG 493 (735)
T KOG3626|consen 414 FLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLFYSLLFFIGCESSPVAG 493 (735)
T ss_pred hhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHHHHHHHEecCCCCcccc
Confidence 99999999999996555 333555566688999999999999776443334444444444444333222
Q ss_pred ---------------------------------------------------------------------hh---------
Q 012500 335 ---------------------------------------------------------------------LS--------- 336 (462)
Q Consensus 335 ---------------------------------------------------------------------~~--------- 336 (462)
.+
T Consensus 494 ~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~~~ytnCsCv~~~~~~~~~a 573 (735)
T KOG3626|consen 494 VTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGNTIYTNCSCVPTNKNGNGSA 573 (735)
T ss_pred eecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCceeeccccccccccCCCcee
Confidence 00
Q ss_pred -----------hhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhh
Q 012500 337 -----------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 402 (462)
Q Consensus 337 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~ 402 (462)
....+++.+++..+..+....+...++.+.+++|+|..++|+..+..+.+|.+.+|+++|+++|..
T Consensus 574 ~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~ID~t 650 (735)
T KOG3626|consen 574 KKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVIDTT 650 (735)
T ss_pred ecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhHhhH
Confidence 112344555555666667778889999999999999999999999999999999999999999986
No 99
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.91 E-value=1.3e-21 Score=183.54 Aligned_cols=346 Identities=15% Similarity=0.117 Sum_probs=262.8
Q ss_pred hhhHHHHHHHHHhhhhhhccc-cccCCchhHHH-HHHHHHHHHHhhhcc-c-hhHHHHHHHHHhhcccccccccccchhc
Q 012500 36 SVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGV-GLSVWTFATAGCGSS-F-DFWSIAICRMLVGVGEASFISLAAPFID 111 (462)
Q Consensus 36 s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~-~~~~~~~~~~~~~~~-~-~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 111 (462)
++..+...+-..+..|+.|.+ |+-|+||.++. ...+..+++....+. + +++...+.-++.-++.+.......+++.
T Consensus 73 ~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~LP 152 (477)
T PF11700_consen 73 LYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYLP 152 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 456778888888999999999 99988886554 445555566666653 3 4444455555566677778888899999
Q ss_pred ccCCCCCc--------------------------hhHHHHHHhhhhhhhhhhhhHHHHhhc--------ccchHHHHHHH
Q 012500 112 DNAPVPQK--------------------------TAWLSMFYMCIPTGVALGYVYGGVVGS--------HLNWRYAFWGE 157 (462)
Q Consensus 112 ~~~~~~~r--------------------------~~~~~~~~~~~~~G~~~g~~~~~~l~~--------~~gwr~~f~~~ 157 (462)
|..+++++ ++..+.-.....+|.++.-.+.-.+.. ..+-|..+.+.
T Consensus 153 ~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~ 232 (477)
T PF11700_consen 153 DLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIV 232 (477)
T ss_pred hhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHH
Confidence 99998888 899999888888888887776655431 12358999999
Q ss_pred HHHHHHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhh
Q 012500 158 AILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQD 237 (462)
Q Consensus 158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (462)
++.-++..+..++..|+.++....++..+ .....+++..+.
T Consensus 233 a~ww~vfsiP~~~~~~~~~~~~~~~~~~~---------------------------------------~~~~g~~~l~~t 273 (477)
T PF11700_consen 233 ALWWLVFSIPLFLWLPDRPGPRPLPSGSS---------------------------------------YLRFGFKRLWRT 273 (477)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCcchh---------------------------------------HHHHHHHHHHHH
Confidence 99888888888888877544211111111 011345566677
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchh
Q 012500 238 TKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFK 316 (462)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~ 316 (462)
+|++.+.|.....+++++++.-+...+......|..+..+++..+. .+..+..+.+++|.++.|++.||+|.|.. +
T Consensus 274 ~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~---~ 350 (477)
T PF11700_consen 274 FKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTK---R 350 (477)
T ss_pred HHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh---H
Confidence 8888889999999999999999999999999999999999997776 45577889999999999999999998733 3
Q ss_pred HHHHHHHHHHHHHHHHHH--------hhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhcc
Q 012500 317 LLSAATFLGAISCLTAFC--------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGD 388 (462)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 388 (462)
.+.....+..+..+.... .++.+..++...+.|.+.+..++..-++..+..|+++.+.-.|++..... ..+
T Consensus 351 ~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk-~ss 429 (477)
T PF11700_consen 351 TLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGK-ASS 429 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHH-HHH
Confidence 333333333333333333 45777788888899999999999999999999999999999999965544 489
Q ss_pred ccchhHHHHHHhhhcchhHHHHHHHHHHHHHHHHHH
Q 012500 389 VPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 424 (462)
Q Consensus 389 ~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 424 (462)
++||.+.|.+.|.+|+.+.++....++.+++.+++.
T Consensus 430 ~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~ 465 (477)
T PF11700_consen 430 WLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLF 465 (477)
T ss_pred HHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHh
Confidence 999999999999999888888888877777666654
No 100
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.91 E-value=8.6e-22 Score=188.55 Aligned_cols=146 Identities=16% Similarity=0.115 Sum_probs=119.5
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cc-cCCchhHHHHHHHHHHHHHhhhccc-hhHHHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CS-HNPFRLIGVGLSVWTFATAGCGSSF-DFWSIAICR 92 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr-~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r 92 (462)
+|.++.++ ++.++.+.+. ..+.+........++.|++ || +|||+++..+.++.+++..++++++ +.+.++++|
T Consensus 44 l~~yl~~~--lg~s~~~a~~--~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~ 119 (500)
T PRK09584 44 MAVYLVKQ--LGMSEADSIT--LFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGM 119 (500)
T ss_pred HHHHHHHH--cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 56666554 6666666444 6666665555666789999 99 5999999999999999999998875 566777899
Q ss_pred HHhhcccccccccccchhcccCCCCC--chhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHH
Q 012500 93 MLVGVGEASFISLAAPFIDDNAPVPQ--KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFA 165 (462)
Q Consensus 93 ~l~G~~~g~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~ 165 (462)
+++|++.|...+...+++.|++|+++ |..++++++.+.++|..+||.+++++.+++|||+.|++.++..++..
T Consensus 120 ~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 120 ATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITV 194 (500)
T ss_pred HHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998654 45688999999999999999999999999999999999876544433
No 101
>PRK09669 putative symporter YagG; Provisional
Probab=99.91 E-value=6.2e-22 Score=188.27 Aligned_cols=332 Identities=13% Similarity=0.055 Sum_probs=216.5
Q ss_pred HHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cc----cCCc-hhHHHHHHHHHHHHHhhhccch---
Q 012500 14 LILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CS----HNPF-RLIGVGLSVWTFATAGCGSSFD--- 84 (462)
Q Consensus 14 ~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr----~Grr-~~l~~~~~~~~~~~~~~~~~~~--- 84 (462)
..++.+..+. ++++..+.+. +.+...+...+..|+.|++ || +||| +.++.+.+..+++..+....++
T Consensus 30 ~~l~~~~t~~--~gls~~~~g~--i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~ 105 (444)
T PRK09669 30 LFLAYFYTDV--FGLSAAIMGT--MFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGA 105 (444)
T ss_pred HHHHHHHHHh--cCCCHHHHHH--HHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCc
Confidence 3344455554 6788888666 9999999999999999999 98 7775 4566777777777765544443
Q ss_pred ---hHHHHHHHHHhhcccccccccccchhcccC-CCCCchhHHHHHHhhhhhhhhhhhhHHHHhhc-------ccchHHH
Q 012500 85 ---FWSIAICRMLVGVGEASFISLAAPFIDDNA-PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-------HLNWRYA 153 (462)
Q Consensus 85 ---~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-------~~gwr~~ 153 (462)
...+++..++.+.+.........++.+|+. +++||++..++...+..+|..+++.+...+.. ..+|+..
T Consensus 106 ~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~ 185 (444)
T PRK09669 106 TGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYA 185 (444)
T ss_pred chHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHH
Confidence 455666666777766667777788999988 46889998888888888888777765443322 3579999
Q ss_pred HHHHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhc
Q 012500 154 FWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQ 233 (462)
Q Consensus 154 f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (462)
+.+.++++++..+..++..+|..+. +++++ ++
T Consensus 186 ~~i~~ii~~v~~~~~~~~~~e~~~~----~~~~~--------------------------------------------~~ 217 (444)
T PRK09669 186 MMVMGLLGVVLFFCCFFMTKERYTP----EVDNS--------------------------------------------SS 217 (444)
T ss_pred HHHHHHHHHHHHHHHhCCeEEecCC----CCcCC--------------------------------------------CC
Confidence 9888888777666655554442111 00000 01
Q ss_pred chhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchhhhhhhHHHhhhhhhhhhhHHHhhhcccccc
Q 012500 234 FSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISN 313 (462)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 313 (462)
..++++.+++|+.++...+..++............+.|.+...+.+.....+.....+..+++.++.+++.||+++|
T Consensus 218 ~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~--- 294 (444)
T PRK09669 218 VWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRV--- 294 (444)
T ss_pred HHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH---
Confidence 12457788899998888776665555544444444434333333222222333445567778888999999999988
Q ss_pred chhHHHHHHHHHHHHHH-HHH-HhhhhHHHHHHHHHHHHHHHhccccceeeeeccCC-------cchhhHHHHHHHHHHh
Q 012500 314 AFKLLSAATFLGAISCL-TAF-CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIH 384 (462)
Q Consensus 314 ~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 384 (462)
+....+......... ... ..++.+..++..++.+++.+...+...+++.|..+ .+..|...|..+....
T Consensus 295 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~k 372 (444)
T PRK09669 295 --RAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIK 372 (444)
T ss_pred --HHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHH
Confidence 555544443332222 222 22345555666667777777777777777777664 2334566777755555
Q ss_pred hhccccchhHHHHHHhhhc
Q 012500 385 IFGDVPSSPLVGVLQDHVN 403 (462)
Q Consensus 385 ~~g~~~~~~~~g~l~~~~g 403 (462)
. |..+++.+.|.+.+..|
T Consensus 373 l-g~alg~~i~g~ll~~~G 390 (444)
T PRK09669 373 L-GLAIGGAVVGWILAWVD 390 (444)
T ss_pred H-HHHHHHHHHHHHHHHcC
Confidence 5 99999999999998765
No 102
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.90 E-value=1.8e-21 Score=179.26 Aligned_cols=341 Identities=17% Similarity=0.097 Sum_probs=242.9
Q ss_pred HHHHHHHHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccC-CchhHHHHHHHHHHHHHhhhccchh
Q 012500 8 LLCLIGLILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHN-PFRLIGVGLSVWTFATAGCGSSFDF 85 (462)
Q Consensus 8 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~G-rr~~l~~~~~~~~~~~~~~~~~~~~ 85 (462)
..+..|..+|.....-++.+.|..|.|. +.+...+..++.++++|.+ ||++ +||.+.+..++.++........+++
T Consensus 14 ~f~~~G~~~p~~~~~L~~~G~s~~qIG~--l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f 91 (400)
T PF03825_consen 14 YFFAYGAFLPYLPLYLESRGFSGTQIGI--LLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSF 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 3455566655443333336899999777 9999999999999999999 9985 5777878888888877777888899
Q ss_pred HHHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhH-HHHhhcccc---hHHHHHHHHHHH
Q 012500 86 WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVY-GGVVGSHLN---WRYAFWGEAILM 161 (462)
Q Consensus 86 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~-~~~l~~~~g---wr~~f~~~~~~~ 161 (462)
+.+++.-++..+...+..|...++..+... ++++-.|-.-...++|.+++... ++.+....+ ..+.+++.+..+
T Consensus 92 ~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 169 (400)
T PF03825_consen 92 WWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILS 169 (400)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHH
Confidence 998888888888888888888888888875 34455666666677777766543 233333222 234566665554
Q ss_pred HHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHH
Q 012500 162 LPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVL 241 (462)
Q Consensus 162 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (462)
++..... +..|+.+++++.+++.++. ...+..++
T Consensus 170 ~ll~~~~-l~lp~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~l 203 (400)
T PF03825_consen 170 LLLAGFA-LFLPKTPPKRSAKESVKKL---------------------------------------------LGLDALKL 203 (400)
T ss_pred HHHHHHH-HhCCCCccccccCCCcccc---------------------------------------------cchHHHHH
Confidence 4443333 3346544221111110000 01234578
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHH
Q 012500 242 LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSA 320 (462)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 320 (462)
+|+|++....+..++..........+.+.|+++..+.+.... ...++..++.++.....+++.+|+|.+ +++..
T Consensus 204 lk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~-----~ll~~ 278 (400)
T PF03825_consen 204 LKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIK-----WLLLL 278 (400)
T ss_pred hcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHH
Confidence 999999988888888888888888999999999876553333 333566677788888899999999988 88888
Q ss_pred HHHHHHHHHHHHHHh-hhhHHHHHHH----HHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHH
Q 012500 321 ATFLGAISCLTAFCL-SSLYGFLALF----TVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV 395 (462)
Q Consensus 321 ~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 395 (462)
+....++=..+.... ++.+..++.. .+.|..++..+.....++.+..|++.|+++.++++.....+|..+|..++
T Consensus 279 a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~ig 358 (400)
T PF03825_consen 279 ALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIG 358 (400)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHH
Confidence 887777766666555 4444433333 34788888888888889999999999999999998777777999999999
Q ss_pred HHHHhhhc
Q 012500 396 GVLQDHVN 403 (462)
Q Consensus 396 g~l~~~~g 403 (462)
|++.|+.|
T Consensus 359 G~l~~~~g 366 (400)
T PF03825_consen 359 GWLYDAFG 366 (400)
T ss_pred HHHHHHhc
Confidence 99999987
No 103
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.90 E-value=1.5e-21 Score=186.65 Aligned_cols=338 Identities=7% Similarity=-0.053 Sum_probs=215.4
Q ss_pred HHHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-c----ccCC-chhHHHHHHHHHHHHHhhhccch--
Q 012500 13 GLILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-C----SHNP-FRLIGVGLSVWTFATAGCGSSFD-- 84 (462)
Q Consensus 13 ~~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-d----r~Gr-r~~l~~~~~~~~~~~~~~~~~~~-- 84 (462)
+..++.+..+. ++++....+. +....-+--.+..|+.|++ | |+|| |+.++.+.+..+++..++-..++
T Consensus 26 ~~~l~~yyt~v--~Gls~~~vg~--i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~ 101 (473)
T PRK10429 26 YMYLMYYYTDV--VGLSVGLVGT--LFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFE 101 (473)
T ss_pred HHHHHHHHHHh--cCCCHHHHHH--HHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCC
Confidence 33345455554 6788888666 8888999999999999999 9 6699 55677788887777655544331
Q ss_pred ----hHHHHHHHHHhhcccccccccccchhcccC-CCCCchhHHHHHHhhhhhhhhhhhhHHHHhh-------cccchHH
Q 012500 85 ----FWSIAICRMLVGVGEASFISLAAPFIDDNA-PVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-------SHLNWRY 152 (462)
Q Consensus 85 ----~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~-------~~~gwr~ 152 (462)
+..+++.-++.+++.....+...++..|.. +++||.+..++-....++|..+.+.+...+. +..+|+.
T Consensus 102 ~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~ 181 (473)
T PRK10429 102 GTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQM 181 (473)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHH
Confidence 334555666778888888888889999998 5889999999877777777666555443321 1236888
Q ss_pred HHHHHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhh
Q 012500 153 AFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLS 232 (462)
Q Consensus 153 ~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (462)
...+.+++.++..+..++..||.++... ++++.. +..
T Consensus 182 ~~~i~~~~~~~~~~~~~~~~~e~~~~~~--~~~~~~-----------------------------------------~~~ 218 (473)
T PRK10429 182 FTLVLIAFFIVSTIITLRNVHEVYSSDN--QVSAEG-----------------------------------------SHL 218 (473)
T ss_pred HHHHHHHHHHHHHHHHHcCceecCCccc--cccccc-----------------------------------------cCC
Confidence 8777777766666666555555321100 000000 000
Q ss_pred cchhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchhhhhhhHHHhhhhhhhhhhHHHhhhccccc
Q 012500 233 QFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATIS 312 (462)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 312 (462)
+..+.++.+++||.++..+...++..........+.+.|.+...+.......+.....++.+++.++.+++.||+|+|
T Consensus 219 ~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk-- 296 (473)
T PRK10429 219 TLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRR-- 296 (473)
T ss_pred CHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH--
Confidence 112346667789888888777777776666666666655554433322222333445577788889999999999998
Q ss_pred cchhHHHHHHHHHHHHHHHHHH-----hhhhHHHHHHHHHHHHHHHhccccceeeeeccCC-------cchhhHHHHHHH
Q 012500 313 NAFKLLSAATFLGAISCLTAFC-----LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAIST 380 (462)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 380 (462)
+.+..+..+..+..+.... .++.+..++...+.+++.+...+...+++.|..+ .+..|...|..+
T Consensus 297 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~ 373 (473)
T PRK10429 297 ---ILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQT 373 (473)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHH
Confidence 6665444443332222211 2334444445555666666666666666666644 234556778875
Q ss_pred HHHhhhccccchhHHHHHHhhhc
Q 012500 381 VSIHIFGDVPSSPLVGVLQDHVN 403 (462)
Q Consensus 381 ~~~~~~g~~~~~~~~g~l~~~~g 403 (462)
.... ++..+++.+.|++.+..|
T Consensus 374 ~~~K-~~~al~~~i~g~~l~~~G 395 (473)
T PRK10429 374 MVVK-GGSAFAAFFIGVVLGLIG 395 (473)
T ss_pred HHHH-HHHHHHHHHHHHHHHHcC
Confidence 4444 488999999999988765
No 104
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.90 E-value=1.2e-22 Score=167.69 Aligned_cols=362 Identities=11% Similarity=0.009 Sum_probs=232.9
Q ss_pred HHHHHHHHHHH------hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cc-cCCchhHHHHHHHHHHHH
Q 012500 5 IHVLLCLIGLI------LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CS-HNPFRLIGVGLSVWTFAT 76 (462)
Q Consensus 5 i~~~~~~~~~~------~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr-~Grr~~l~~~~~~~~~~~ 76 (462)
..++.|..|+- .|..++.+...+.+-.....+++.+.|....++...+.|++ || +|-|..-++-+....++.
T Consensus 45 ~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~Gq 124 (459)
T KOG4686|consen 45 ALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQ 124 (459)
T ss_pred HHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHH
Confidence 34455555543 46555555444433333334558899999999999999999 65 788887666666777777
Q ss_pred Hhhh---ccchhHHHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccch---
Q 012500 77 AGCG---SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW--- 150 (462)
Q Consensus 77 ~~~~---~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gw--- 150 (462)
++++ .++.+|++..+||+.|+|.-....+-..+...|+..||.+.++|+.....-+|..+-..+.+++.+..+=
T Consensus 125 liFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~ 204 (459)
T KOG4686|consen 125 LIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFP 204 (459)
T ss_pred HHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcc
Confidence 7766 4689999999999999999988888999999999999999999999999999998887777777654320
Q ss_pred ---HHH---HHHHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhcccc
Q 012500 151 ---RYA---FWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGE 224 (462)
Q Consensus 151 ---r~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (462)
+.. ....+.......+...... ... +++.+... + .++....+.+
T Consensus 205 ~~ghT~LG~~l~~~~~tc~~slical~l----g~~--D~rAeril--------h-------------~e~g~~Ge~p--- 254 (459)
T KOG4686|consen 205 GVGHTLLGLWLCFEVKTCKQSLICALSL----GLS--DDRAERIL--------H-------------LEEGFLGEEP--- 254 (459)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHh----hhh--hhHHHHHH--------h-------------hhcCcccCCc---
Confidence 000 1111111111111111100 000 00000000 0 0000000000
Q ss_pred ccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHH
Q 012500 225 SRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFI 303 (462)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l 303 (462)
+ ..+.+. -.|.+|.+.+...+++.....+....|.++++.+|+++.+. .+.+.....+.+.+++.|.+
T Consensus 255 -----k----Ltdv~~--f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i 323 (459)
T KOG4686|consen 255 -----K----LTDVNT--FYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAI 323 (459)
T ss_pred -----c----cccccc--cCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHh
Confidence 0 011111 24778888888899999999999999999999999997666 44466666677788899999
Q ss_pred HhhhccccccchhHHHHH-HHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHH
Q 012500 304 LDQMGATISNAFKLLSAA-TFLGAISCLTAFC-LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTV 381 (462)
Q Consensus 304 ~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (462)
+||.|++ .+.+.+ .+.....-..+.+ .-+++ ..+++.|.............+...+|+++.|++.|.++.
T Consensus 324 ~Dk~G~n-----~~wv~~a~~~tl~~H~~l~Ft~lsPy---~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qs 395 (459)
T KOG4686|consen 324 SDKYGFN-----LWWVASACILTLLGHSGLFFTFLSPY---TSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQS 395 (459)
T ss_pred Hhhhcce-----ehhHHHHHHHHHHHhhhHHhhhccHH---HHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHH
Confidence 9999998 444333 3333333222222 12333 344444444443333344455666788999999999988
Q ss_pred HHhhhccccchhHHHHHHhhhcchhHHHHHHHHHH
Q 012500 382 SIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF 416 (462)
Q Consensus 382 ~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 416 (462)
..+. |-++.|++.|.+.|.-|+|.+.-.++.++.
T Consensus 396 IqNL-gla~i~Iiag~i~d~~g~y~~le~ffl~~~ 429 (459)
T KOG4686|consen 396 IQNL-GLAFIPIIAGFIADGDGSYDNLEAFFLIIG 429 (459)
T ss_pred HHhh-hhhHHhhhhheeecCCCchhhHHHHHHHHH
Confidence 8887 999999999999998887665544444433
No 105
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.89 E-value=1.1e-20 Score=178.93 Aligned_cols=332 Identities=16% Similarity=0.115 Sum_probs=249.6
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-c----ccCCchh-HHHHHHHHHHHHHhhhcc-c-----
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-C----SHNPFRL-IGVGLSVWTFATAGCGSS-F----- 83 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-d----r~Grr~~-l~~~~~~~~~~~~~~~~~-~----- 83 (462)
++.+..+. .++++...+. +.....+-.++..|+.|.+ | |+||||. ++.|.+..+++..++... +
T Consensus 24 ~~~f~~~~--~gl~~~~~g~--i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~ 99 (428)
T PF13347_consen 24 LLYFYTDV--LGLSPALAGL--ILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSF 99 (428)
T ss_pred HHHHHHHH--cCCCHHHHHH--HHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhh
Confidence 33344443 5778877555 8888888999999999999 9 8997775 567888888888777766 4
Q ss_pred --hhHHHHHHHHHhhcccccccccccchhcccCC-CCCchhHHHHHHhhhhhhhhhhhhHHHHhhcc-------cchHHH
Q 012500 84 --DFWSIAICRMLVGVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-------LNWRYA 153 (462)
Q Consensus 84 --~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-------~gwr~~ 153 (462)
....+.+.-++..++.........++..|..+ ++||.+..+.-+.+..+|..+...+.+.+.+. .+|++.
T Consensus 100 ~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~ 179 (428)
T PF13347_consen 100 TAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWM 179 (428)
T ss_pred hhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHH
Confidence 23345777777799999899999999999997 57899999999999999887666666655432 169999
Q ss_pred HHHHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhc
Q 012500 154 FWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQ 233 (462)
Q Consensus 154 f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (462)
.++.+++.++..++..+..+|..+.. +++++ ..+
T Consensus 180 ~~v~~iv~~v~~~i~~~~~ke~~~~~--~~~~~--------------------------------------------~~~ 213 (428)
T PF13347_consen 180 ALVLAIVGLVFFLITFFFVKERSVEV--TEQEK--------------------------------------------KIS 213 (428)
T ss_pred HHHHHHHHHHHhhhhhheeeeccccc--ccccc--------------------------------------------ccc
Confidence 99999988888888887776611111 00000 011
Q ss_pred chhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchhhhhhhHHHhhhhhhhhhhHHHhhhcccccc
Q 012500 234 FSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISN 313 (462)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 313 (462)
..+.++.+++||.++......++............+.|.+...+.+.....+.....++.+++.++.++++||+|+|
T Consensus 214 ~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~--- 290 (428)
T PF13347_consen 214 LRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKK--- 290 (428)
T ss_pred cccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccce---
Confidence 13457788999999988888888888877777788888888877774444555677888899999999999999998
Q ss_pred chhHHHHHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHhccccceeeeeccCCc-------chhhHHHHHHHHHHh
Q 012500 314 AFKLLSAATFLGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-------SLRALSMAISTVSIH 384 (462)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 384 (462)
+....+..+.+...+..... ++.+..++...+.+++.+..+....++..|..+. +..|...|+.+....
T Consensus 291 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k 368 (428)
T PF13347_consen 291 --KVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIK 368 (428)
T ss_pred --eehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhH
Confidence 77766666666655555544 4778888888889999998888888888887763 345788888865555
Q ss_pred hhccccchhHHHHHHhhhc
Q 012500 385 IFGDVPSSPLVGVLQDHVN 403 (462)
Q Consensus 385 ~~g~~~~~~~~g~l~~~~g 403 (462)
. +..+++.+.+.+.+..|
T Consensus 369 ~-~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 369 I-GQGLAGAIVGLLLALVG 386 (428)
T ss_pred H-HHHHHHHHHHHHHHHhC
Confidence 5 88889989998887765
No 106
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.89 E-value=4.1e-21 Score=172.22 Aligned_cols=274 Identities=13% Similarity=0.111 Sum_probs=198.3
Q ss_pred hccchhHHHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcc------------
Q 012500 80 GSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH------------ 147 (462)
Q Consensus 80 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~------------ 147 (462)
+..++|+.++++-++.|.|.+...+..+.++++..|+|++++.+++.+...++|..++|.+++.+...
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 34578999999999999999999999999999999999999999999999999999999999977731
Q ss_pred ----cchHHHHHHHHHHHHHHHHHHhhc-cccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhcc
Q 012500 148 ----LNWRYAFWGEAILMLPFAVLAFVI-KPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSI 222 (462)
Q Consensus 148 ----~gwr~~f~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (462)
..||++|++.+.+..+..+...+. .||..+ +++++.. ++ +.
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~----~~~~~~~-----------------------~~---~~---- 130 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE----ADVARVS-----------------------SG---DT---- 130 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc----ccccccc-----------------------cc---cc----
Confidence 479999997777655555444333 233110 0000000 00 00
Q ss_pred ccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH--hCCCcchh-hhhhhHHHhhhhhhhh
Q 012500 223 GESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI--YHMSNADM-MFGGVTIVCGIVGTIS 299 (462)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~ 299 (462)
.+.++.+++|.++...+..+++.....+...|.+.|+.+. ++.++... ...+....+.++|+++
T Consensus 131 -------------~~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~ 197 (310)
T TIGR01272 131 -------------TQKTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFI 197 (310)
T ss_pred -------------cchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0012356678888877777787778889999999999864 57776555 4457788889999999
Q ss_pred hhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHH
Q 012500 300 GGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAIS 379 (462)
Q Consensus 300 ~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (462)
++++.||++++ +.+.....+......+....++. .......+.+++.+..+|...+...+..|++ .+++.++.
T Consensus 198 ~~~l~~r~g~~-----~~l~~~~~l~~~~~~l~~~~~~~-~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~ 270 (310)
T TIGR01272 198 GSAVMPMISQG-----RYLAFNAFLAVLLSIGAALTHGY-VAMWFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL 270 (310)
T ss_pred HHHHHHHhCHH-----HHHHHHHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH
Confidence 99999999987 66655555544444333333332 2334555778888888998888888887654 45666665
Q ss_pred HHHHhhhccccchhHHHHHHhhhcchhHHHH
Q 012500 380 TVSIHIFGDVPSSPLVGVLQDHVNNWRKTTL 410 (462)
Q Consensus 380 ~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 410 (462)
.. +.+|+++.|++.|.+.|..| .+.+++
T Consensus 271 -~~-~~~Gg~i~P~l~G~lad~~g-~~~a~~ 298 (310)
T TIGR01272 271 -CL-AIVGGAIVPLLQGSLADCLG-IQLAFA 298 (310)
T ss_pred -HH-HHhcchHHHHHHHHHHHhcc-chHHHH
Confidence 34 44599999999999999877 555555
No 107
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.88 E-value=1.6e-24 Score=206.00 Aligned_cols=362 Identities=20% Similarity=0.352 Sum_probs=3.0
Q ss_pred hhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccc----------------
Q 012500 21 KKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSF---------------- 83 (462)
Q Consensus 21 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~---------------- 83 (462)
..++.++++.++.|. +.+.+-++.++..++..++ +|..|-|++..|.++++++++++++-+
T Consensus 28 tiErRF~l~S~~~G~--i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~ 105 (539)
T PF03137_consen 28 TIERRFGLSSSQSGL--ISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNG 105 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhcCCCHHHHHH--HHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccc
Confidence 455568999999777 9999999999999999999 998899999999999999999987521
Q ss_pred ----------------------------------hhHHHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhh
Q 012500 84 ----------------------------------DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMC 129 (462)
Q Consensus 84 ----------------------------------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~ 129 (462)
-+..++++.++.|+|....++.+.+|+-|.+++++-+..+|+..+.
T Consensus 106 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~ 185 (539)
T PF03137_consen 106 NSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAM 185 (539)
T ss_dssp ----------------------------------------------SSS-------------------------------
T ss_pred ccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHH
Confidence 0245788999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhHHHHhhccc----------------------chHHHHHHHHHHHHHHHHHHhhccccccCCCCCcccccc
Q 012500 130 IPTGVALGYVYGGVVGSHL----------------------NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKA 187 (462)
Q Consensus 130 ~~~G~~~g~~~~~~l~~~~----------------------gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 187 (462)
..+|.++|..+++.+.+.+ .|-.-|++.+++.++..+..+++ |+..+...+.++.++
T Consensus 186 ~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~F-Pk~lp~~~~~~~~~~ 264 (539)
T PF03137_consen 186 SILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFF-PKKLPGTSERQEEKE 264 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcC-CccCCCcccccchhh
Confidence 9999999999998776421 26666666676666665555544 554433211111000
Q ss_pred ccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 012500 188 QVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYW 267 (462)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (462)
..++ +.++...+..++.+.........+++++..+++++||.+....++.........++.+|
T Consensus 265 ~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF 327 (539)
T PF03137_consen 265 SSER-----------------KEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATF 327 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhc-----------------chhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 00000000000001111223456777888999999999999999999999999999999
Q ss_pred hhHHHHHHhCCCcchh--hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHH-----------
Q 012500 268 GPKAGYNIYHMSNADM--MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC----------- 334 (462)
Q Consensus 268 ~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 334 (462)
+|.|++.+++.++..+ ....+...++.+|.+++|++.+|++-+.+...++.....++..+.....+.
T Consensus 328 ~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv 407 (539)
T PF03137_consen 328 LPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGV 407 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeee
Confidence 9999999999996554 333555567789999999999999766444334444333333332111111
Q ss_pred ---h-------------------------------------hhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhH
Q 012500 335 ---L-------------------------------------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRAL 374 (462)
Q Consensus 335 ---~-------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (462)
. ......++..++..+..+....+......+.+++++|+.
T Consensus 408 ~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~ 487 (539)
T PF03137_consen 408 TVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSF 487 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcch
Confidence 0 011233444445555666777788888899999999999
Q ss_pred HHHHHHHHHhhhccccchhHHHHHHhhh
Q 012500 375 SMAISTVSIHIFGDVPSSPLVGVLQDHV 402 (462)
Q Consensus 375 ~~~~~~~~~~~~g~~~~~~~~g~l~~~~ 402 (462)
|.|+.....+.+|.+.+|+++|.+.|..
T Consensus 488 AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 488 ALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp ----------------------------
T ss_pred hhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 9999999999999999999999999964
No 108
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.88 E-value=5.1e-20 Score=171.61 Aligned_cols=363 Identities=13% Similarity=0.016 Sum_probs=235.4
Q ss_pred hhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-c----ccCCchhHHHH-HHHHHHHHHhhhccchhH----
Q 012500 17 KRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-C----SHNPFRLIGVG-LSVWTFATAGCGSSFDFW---- 86 (462)
Q Consensus 17 p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-d----r~Grr~~l~~~-~~~~~~~~~~~~~~~~~~---- 86 (462)
+.+.++ ++.++...+. +.....+..++.+|+.|++ | |+||||.++.+ .....++.++.+++++++
T Consensus 28 ~~yl~~---lg~~~~~~~~--i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~ 102 (477)
T TIGR01301 28 TPYVQE---LGIPHAWASI--IWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFG 102 (477)
T ss_pred HHHHHH---cCCCHHHHHH--HHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhcc
Confidence 335444 7888877555 8889999999999999999 9 59999998774 666777777777776653
Q ss_pred -------------HHHHHHHHhhcccccccccccchhcccCCCCCc--hhHHHHHHhhhhhhhhhhhhHHHHh--hccc-
Q 012500 87 -------------SIAICRMLVGVGEASFISLAAPFIDDNAPVPQK--TAWLSMFYMCIPTGVALGYVYGGVV--GSHL- 148 (462)
Q Consensus 87 -------------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~g~~~~~~l--~~~~- 148 (462)
.++++-.+..++.....+...++++|.+|+++| +.+.++.+...++|.++|+.++++. .+.+
T Consensus 103 ~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~ 182 (477)
T TIGR01301 103 DNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFP 182 (477)
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcc
Confidence 223333344457777778889999999998865 6899999999999999999999875 2211
Q ss_pred ------------chHHHHHHHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhh
Q 012500 149 ------------NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASE 216 (462)
Q Consensus 149 ------------gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (462)
+.|..|++.++..++..+...+..||.+... +++.+.. +.++.++.
T Consensus 183 ~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~--~~~~~~~--------------------~~~~~~~~ 240 (477)
T TIGR01301 183 FTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIG--SDDFINS--------------------EAAPPSKH 240 (477)
T ss_pred cccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCc--cccchhh--------------------hccccccc
Confidence 5789999998888888888888777754321 0100000 00000000
Q ss_pred hhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHhCCCcc-------h---h-h
Q 012500 217 RSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGY-NIYHMSNA-------D---M-M 284 (462)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~-------~---~-~ 284 (462)
. .....++..++++++ .+.++.+++..++..++.+.+..|.+.+.. +.++-++. . . .
T Consensus 241 --~-------~~~~~~~i~~~~~~m--P~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~ 309 (477)
T TIGR01301 241 --G-------EEAFFGELFGAFKYL--PRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAF 309 (477)
T ss_pred --c-------hhhhHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHH
Confidence 0 001122233334332 467888888888888888888888887765 45554321 1 1 1
Q ss_pred hhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhh---------------------hHHHHH
Q 012500 285 FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS---------------------LYGFLA 343 (462)
Q Consensus 285 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~ 343 (462)
......+...+.+++..++.+|+|+|+ +....+.++.+.++....+.++ .+..++
T Consensus 310 ~l~~~s~~~~i~s~~l~~l~~~~g~~k----~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 385 (477)
T TIGR01301 310 GLMLNSVVLGITSIGMEKLCRGWGAGK----RLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALI 385 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccch----hHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHH
Confidence 113334444455566677778887531 4434554444444443332221 356677
Q ss_pred HHHHHHHHHHhccccceeeeeccCCc--chhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchh-HHHHHHHHHHHHHH
Q 012500 344 LFTVGELLVFATQAPVNYVCLHSVKP--SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR-KTTLALTSIFFLAA 420 (462)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~-~~~~~~~~~~~~~~ 420 (462)
.+.+.|+.....+..-++++.++.++ +..|..+|+.|.+... ..++.....|.+.+..|+.. ..+.+.++..+++.
T Consensus 386 ~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~l-pQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa 464 (477)
T TIGR01301 386 VFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVI-PQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSG 464 (477)
T ss_pred HHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHH-HHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHH
Confidence 77778888887777778888888885 4569999999987776 88888888888777776433 33444444444444
Q ss_pred HH
Q 012500 421 GI 422 (462)
Q Consensus 421 ~~ 422 (462)
++
T Consensus 465 ~~ 466 (477)
T TIGR01301 465 LL 466 (477)
T ss_pred HH
Confidence 33
No 109
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.88 E-value=6.9e-21 Score=167.68 Aligned_cols=365 Identities=12% Similarity=0.046 Sum_probs=273.1
Q ss_pred HHHhhhhhhhcccc---ccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhH-HHHHHHHHHHHHhhhccch--h
Q 012500 13 GLILKRSMKKKKFL---SLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLI-GVGLSVWTFATAGCGSSFD--F 85 (462)
Q Consensus 13 ~~~~p~~~~~~~~~---~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l-~~~~~~~~~~~~~~~~~~~--~ 85 (462)
+++.|.+.++..+- +..+.+.-++...+...+...+.+|..|.. |+.|+||.. .....+..++.....++++ +
T Consensus 35 t~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~ 114 (438)
T COG2270 35 TFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSY 114 (438)
T ss_pred eehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCch
Confidence 34455555443221 333444445667888888888999999999 999987754 4555566666666666655 4
Q ss_pred H-HHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHH--HHh-h---------------c
Q 012500 86 W-SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG--GVV-G---------------S 146 (462)
Q Consensus 86 ~-~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~--~~l-~---------------~ 146 (462)
+ ..++.-.+..++.......-.+++.+..++++-++..+.-.....+|+.+.-.+. ... . +
T Consensus 115 ~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~ 194 (438)
T COG2270 115 LLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPAD 194 (438)
T ss_pred HHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccc
Confidence 4 4455677888888889999999999999999988888887777777776655443 111 1 2
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhcccccc
Q 012500 147 HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESR 226 (462)
Q Consensus 147 ~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (462)
...=|.++.+.++..++..+..++..|+.++.. .++. +.
T Consensus 195 ~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~-~~~~----------------------------------------~~ 233 (438)
T COG2270 195 GEDVRITGLLAALWWLLFALPMILNVHDAEKIS-SPPP----------------------------------------TA 233 (438)
T ss_pred cccchhHHHHHHHHHHHHHhHHHhccccccccc-ccch----------------------------------------HH
Confidence 234688888888887777777776665432211 0000 11
Q ss_pred chhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHh
Q 012500 227 FLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILD 305 (462)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d 305 (462)
..+..++...++|++.+++.+...+++.+++.-+.++...+...|....+|++..+. .+.....+.+++|+++.|++.|
T Consensus 234 l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~ 313 (438)
T COG2270 234 LRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDE 313 (438)
T ss_pred HHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 124556667788999999999999999999999999999999999999999998776 5557788999999999999999
Q ss_pred hhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhh
Q 012500 306 QMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 385 (462)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (462)
|++.| +.+..+..+....++...........+.+..+.+.+.+..+...-++..+.+|+++.++..|+++.....
T Consensus 314 rfg~k-----~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra 388 (438)
T COG2270 314 RFGSK-----PVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRA 388 (438)
T ss_pred HhCCc-----eeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhH
Confidence 99998 7777777776666666666666666777778888999999999999999999999999999999655555
Q ss_pred hccccchhHHHHHHhhhcchhHHHHHHHHHHHHHHHHHH
Q 012500 386 FGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 424 (462)
Q Consensus 386 ~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 424 (462)
++.++|.+.+.+.+.+|+.+..+.....+..++..++.
T Consensus 389 -~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~ 426 (438)
T COG2270 389 -ASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLL 426 (438)
T ss_pred -HHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEE
Confidence 99999999999999999887777776666555554443
No 110
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.88 E-value=1.9e-21 Score=184.57 Aligned_cols=373 Identities=13% Similarity=-0.014 Sum_probs=231.5
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccC-----CchhHHHHHHHH-HHHHHhhhccchhHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHN-----PFRLIGVGLSVW-TFATAGCGSSFDFWSI 88 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~G-----rr~~l~~~~~~~-~~~~~~~~~~~~~~~l 88 (462)
++.+++++ ++.+.++.+. ..+...+...+ .+++|.+ ||++ ||+.++++.++. .+.....+..++....
T Consensus 48 ~~~~l~~~--lg~s~~~i~~--~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~ 122 (468)
T TIGR00788 48 LSPMLTDD--LGLDGARYQR--LVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKV 122 (468)
T ss_pred hhHHHHHh--cCCCHHHHHH--HHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHH
Confidence 33344443 6888888655 77777777776 4558999 9998 777788887776 3444444544554444
Q ss_pred H-HHHHHhhcccccccccccchhcccCCCCCchhHH---HHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHH
Q 012500 89 A-ICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWL---SMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPF 164 (462)
Q Consensus 89 ~-~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~---~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~ 164 (462)
. +..++.+++.+...++..++..|..+ ++++... +......++|.++|+.+++.+.+.++||..|++.+++.++.
T Consensus 123 ~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~ 201 (468)
T TIGR00788 123 AAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQ 201 (468)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHH
Confidence 4 48899999999999999999999998 5554433 33344455899999999999999999999999998887766
Q ss_pred HHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhh
Q 012500 165 AVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE 244 (462)
Q Consensus 165 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (462)
.+ ..++.||++....++.+++.. ... ...... .....++..++.++.+++
T Consensus 202 ~~-~~~~~~E~~~~~~~~~~~~~~-----------------~~~--~~~~~~----------~~~~~~~~~~~l~~~l~~ 251 (468)
T TIGR00788 202 LF-VSNLSKERRAFVRPRIGTYLE-----------------MNM--ALLTLG----------VLANVKVQILGLRGAIQL 251 (468)
T ss_pred HH-HHHhcccccccccccccccch-----------------hhh--hhhhhh----------HHHHHHHHHHHHHHHHhc
Confidence 33 344446532110000000000 000 000000 000011112345556778
Q ss_pred hHHHHHHHHHHH-HHHHHHHHHHHhhHHHHHHhCCCcchhh-hhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHH
Q 012500 245 KVYVVNVLGYIA-YNFVIGAYSYWGPKAGYNIYHMSNADMM-FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 322 (462)
Q Consensus 245 ~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 322 (462)
|.++...+..++ +......... .-.+..+..|.++.... ......++.+++....+++.+|++.| +.+..+.
T Consensus 252 ~~i~~~l~fifl~~~~~~~~~~~-~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r-----~~l~~~~ 325 (468)
T TIGR00788 252 LEIAKPLIFIFLSYANLPGASGS-VFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYR-----LLFGVTT 325 (468)
T ss_pred HHHHHHHHHHHHHHhhcCCCCce-eEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHH-----HHHHHHH
Confidence 887775554444 2221111111 00122344677766553 33556677888888888888888876 6666666
Q ss_pred HHHHHHHHHHHH----------hhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccch
Q 012500 323 FLGAISCLTAFC----------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 392 (462)
Q Consensus 323 ~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 392 (462)
++.....+.... .++.+.......+.++..+....+...++.+..|++.+++..++.+...+. |..+++
T Consensus 326 ~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~l-g~~v~~ 404 (468)
T TIGR00788 326 LLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHL-GSSVSG 404 (468)
T ss_pred HHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHH-HHHHHH
Confidence 665554433210 022334445556677777888888899999999999999999999766665 999999
Q ss_pred hHHHHHHhhhc----chhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012500 393 PLVGVLQDHVN----NWRKTTLALTSIFFLAAGIWFVGIFLKS 431 (462)
Q Consensus 393 ~~~g~l~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (462)
.++|.+.+..| +++..+....++.+...+.......+|+
T Consensus 405 ~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~~~~llP~ 447 (468)
T TIGR00788 405 FLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLPLLHLLPR 447 (468)
T ss_pred HHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999876 3444444444443333333333335565
No 111
>PRK09848 glucuronide transporter; Provisional
Probab=99.86 E-value=9.9e-20 Score=173.50 Aligned_cols=329 Identities=10% Similarity=0.004 Sum_probs=203.5
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-ccc----CCchh-HHHHHHHHHHHHHhh-h----ccch
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSH----NPFRL-IGVGLSVWTFATAGC-G----SSFD 84 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~----Grr~~-l~~~~~~~~~~~~~~-~----~~~~ 84 (462)
++.+.++. ++++..+.|. +.+...+...+..|+.|++ ||. ||||. +..+.+...+...+. . ++++
T Consensus 31 l~~y~~~~--~gl~~~~~g~--~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (448)
T PRK09848 31 LLSYYTDV--AGVGAAAAGT--MLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHS 106 (448)
T ss_pred HHHHHHHH--cCCCHHHHHH--HHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcc
Confidence 34355554 5778888666 9999999999999999999 996 66764 455555444444332 1 1222
Q ss_pred --hHHHHHHHHHhhcccccccccccchhcccCC-CCCchhHHHHHHhhh-----hhhhhhhhhHHHHhhccc--chHHHH
Q 012500 85 --FWSIAICRMLVGVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMCI-----PTGVALGYVYGGVVGSHL--NWRYAF 154 (462)
Q Consensus 85 --~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~-----~~G~~~g~~~~~~l~~~~--gwr~~f 154 (462)
...+++.-++.+++.+...+...++..+..+ +++|.+..++-..+. .+|..++|.++....... +|....
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~ 186 (448)
T PRK09848 107 SKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWT 186 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHH
Confidence 2334445567788888888777777777664 467888777665433 345556666655432211 122222
Q ss_pred HHHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcc
Q 012500 155 WGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQF 234 (462)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (462)
.+.++++++..+..+...||+.+. ++++ .+.
T Consensus 187 ~~~~v~~~~~~~~~~~~~~e~~~~----~~~~---------------------------------------------~~~ 217 (448)
T PRK09848 187 IVLAIAGMVLYFICFKSTRENVVR----IVAQ---------------------------------------------PSL 217 (448)
T ss_pred HHHHHHHHHHHHHHHcCcEeccCC----CccC---------------------------------------------CCH
Confidence 233333333333333333432110 0000 011
Q ss_pred hhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchhhhh-hhHHHhhhhhhhhhhHHHhhhcccccc
Q 012500 235 SQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFG-GVTIVCGIVGTISGGFILDQMGATISN 313 (462)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~~~~~~~ 313 (462)
.+.++.+++||.++...+..++..........+.|.|+++..+.++....+. ....++.+++.++.+++.||+++|
T Consensus 218 ~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~--- 294 (448)
T PRK09848 218 KISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK--- 294 (448)
T ss_pred HHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH---
Confidence 2357788999999888887777777777777778888888777665433332 223456677888999999999988
Q ss_pred chhHHHHHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHhccccceeeeeccCCcc-------hhhHHHHHHHHHHh
Q 012500 314 AFKLLSAATFLGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS-------LRALSMAISTVSIH 384 (462)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 384 (462)
+.+..+..+..+........ .+.+.......+.+++.+...+...+...+..+.+ .+|...|+.+....
T Consensus 295 --~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~k 372 (448)
T PRK09848 295 --NTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRK 372 (448)
T ss_pred --HHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHH
Confidence 66666655544443333332 23444445555667777766666666766666543 45888889865555
Q ss_pred hhccccchhHHHHHHhhhc
Q 012500 385 IFGDVPSSPLVGVLQDHVN 403 (462)
Q Consensus 385 ~~g~~~~~~~~g~l~~~~g 403 (462)
. |..+++.+.+.+.+..|
T Consensus 373 l-g~aig~~i~g~~l~~~G 390 (448)
T PRK09848 373 C-GQAIGGSIPAFILGLSG 390 (448)
T ss_pred H-HHHHHHHHHHHHHHHcC
Confidence 5 99999999999887654
No 112
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.86 E-value=6.7e-20 Score=165.40 Aligned_cols=361 Identities=14% Similarity=0.097 Sum_probs=238.3
Q ss_pred HHHHHHHhh---hhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHH--HHHH-Hhhhc
Q 012500 9 LCLIGLILK---RSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVW--TFAT-AGCGS 81 (462)
Q Consensus 9 ~~~~~~~~p---~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~--~~~~-~~~~~ 81 (462)
.+..+...| ..+++. .+++.++.|. +.+...+..++.+|+.|.+ ||.|.||-++..+.+. ..+. ....+
T Consensus 20 Ff~~gi~~pF~~iWL~~~--~GLs~~~iG~--i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~ 95 (412)
T PF01306_consen 20 FFIWGIFLPFFPIWLTQV--AGLSGTEIGI--IFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVF 95 (412)
T ss_dssp HHHHHHHHHHHHHHHHHH--H---HHHHHH--HHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHccc--cCCCHHHHHH--HHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555544 344433 5889999777 9999999999999999999 9999888655443222 1122 22222
Q ss_pred c----chhH-HHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHH
Q 012500 82 S----FDFW-SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWG 156 (462)
Q Consensus 82 ~----~~~~-~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~ 156 (462)
. .|.+ ..+++-...|+......|+..+++.++. ++.+.=.|-.-...++|.+++..++|.+.+. +-+..||+
T Consensus 96 ~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i-~p~~~fwi 172 (412)
T PF01306_consen 96 GPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNI-NPNIIFWI 172 (412)
T ss_dssp HHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeee-CccHHHHH
Confidence 2 2322 2333334445555555666666666664 3445567777888899999999999998863 55778888
Q ss_pred HHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchh
Q 012500 157 EAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQ 236 (462)
Q Consensus 157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (462)
....+++..++.++..|+.++.....+..+.. +.+...+
T Consensus 173 ~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~-----------------------------------------~~~~~~~ 211 (412)
T PF01306_consen 173 ASAAAIILLLLLLLLKPDVPPQAEVADALGAK-----------------------------------------KDKVSLK 211 (412)
T ss_dssp HHHHHHHHHHHHHSS---SSSSS-SSTTSSS-----------------------------------------------HH
T ss_pred HHHHHHHHHHHHHHcCCcCchhhhhhcccccC-----------------------------------------CCCCcHH
Confidence 77766666665555555432221111110000 0000024
Q ss_pred hHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcch---h-hhhhhHHHhhhhhhhhhhHHHhhhccccc
Q 012500 237 DTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD---M-MFGGVTIVCGIVGTISGGFILDQMGATIS 312 (462)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 312 (462)
+..+++|+|++|...+........+..+....|.|....+.....+ . .+.+...+..++...+..++.+|+|.|
T Consensus 212 ~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k-- 289 (412)
T PF01306_consen 212 DVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAK-- 289 (412)
T ss_dssp HHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH--
T ss_pred HHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChH--
Confidence 5678899999999888766666667777766777777655433211 2 223556667788888999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccch
Q 012500 313 NAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 392 (462)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 392 (462)
+.++.+..+..+=.......++++.....-.+.++-.........-++.+.+|++..++...+.......+|.++.+
T Consensus 290 ---~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s 366 (412)
T PF01306_consen 290 ---NLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILS 366 (412)
T ss_dssp ---HHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHH
T ss_pred ---hHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 88888888888888888888888888888899998888888888999999999999888888864444445888889
Q ss_pred hHHHHHHhhhcchhHHHHHHHHHHHHHHHHH
Q 012500 393 PLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 423 (462)
Q Consensus 393 ~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 423 (462)
.+.|.++|+.| ++..+++++.+.++..++.
T Consensus 367 ~~~G~lyd~~G-~~~tylimg~iv~~~~li~ 396 (412)
T PF01306_consen 367 PLAGYLYDRIG-FQHTYLIMGLIVLPFTLIS 396 (412)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred hhHHhhHhhcC-cHHHHHHHHHHHHHHHHHh
Confidence 99999999997 6667777776655444433
No 113
>PRK11462 putative transporter; Provisional
Probab=99.86 E-value=3.5e-19 Score=169.11 Aligned_cols=329 Identities=12% Similarity=0.012 Sum_probs=198.6
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cc----cCCch-hHHHHHHHHHHHHHhhhccch-----
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CS----HNPFR-LIGVGLSVWTFATAGCGSSFD----- 84 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~----- 84 (462)
++.+..+. .++++...+. +....-+--.+.-|+.|++ || +|||| .++++.+..+++..++-..++
T Consensus 32 l~~fyt~~--~Gl~~~~~g~--i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~ 107 (460)
T PRK11462 32 MMFFYTDI--FGIPAGFVGT--MFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNG 107 (460)
T ss_pred HHHHHHHh--hCCCHHHHHH--HHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcch
Confidence 44344443 6777777555 7788777788999999999 85 78876 456677777777766554442
Q ss_pred -hHHHHHHHHHhhcccccccccccchhcccCC-CCCchhHHHHHHhhhhhhhhhhhhHHHHhhcc-------cchHHHHH
Q 012500 85 -FWSIAICRMLVGVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-------LNWRYAFW 155 (462)
Q Consensus 85 -~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-------~gwr~~f~ 155 (462)
...+++.-++..++.......-.++..|..+ ++||++..++...+..+|..+++.+...+.+. .+|+....
T Consensus 108 ~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~ 187 (460)
T PRK11462 108 KMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIA 187 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHH
Confidence 3445556666788888888888889999887 78999999999999999888887775544432 36888888
Q ss_pred HHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcch
Q 012500 156 GEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFS 235 (462)
Q Consensus 156 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (462)
+.+++.+++..+.+...+|..+. ++++ . +..
T Consensus 188 i~~ii~~i~~~i~~~~~kE~~~~----~~~~-~--------------------------------------------~~~ 218 (460)
T PRK11462 188 VLSVVAFMMLAFCFFTTKERVEA----PPTT-T--------------------------------------------SMR 218 (460)
T ss_pred HHHHHHHHHHHHHHhcceeccCC----CccC-C--------------------------------------------CHH
Confidence 87777666665555544442111 0000 0 012
Q ss_pred hhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchhhhhhhHHHhhhhhhhhhhHHHhhhccccccch
Q 012500 236 QDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAF 315 (462)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 315 (462)
+.++..++|+.++......++..............|.....+.......+.....++.+++.++++++.||+++|
T Consensus 219 ~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk----- 293 (460)
T PRK11462 219 EDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKV----- 293 (460)
T ss_pred HHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----
Confidence 346778888888777655555544444433333434443344332222344556677888999999999999987
Q ss_pred hHHHHHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHhccccceeeeeccCC-----cchh--hHHHHHHHHHHhhh
Q 012500 316 KLLSAATFLGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-----PSLR--ALSMAISTVSIHIF 386 (462)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~ 386 (462)
+................... .+.....+..++.+++.+...+...++..|..+ +..| |...+..+.... +
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~K-l 372 (460)
T PRK11462 294 TIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLK-L 372 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHH-H
Confidence 54432222222211222222 222233333444455444433333344444433 1133 444455534444 4
Q ss_pred ccccchhHHHHHHhhhc
Q 012500 387 GDVPSSPLVGVLQDHVN 403 (462)
Q Consensus 387 g~~~~~~~~g~l~~~~g 403 (462)
|..+++.+.|.+.+..|
T Consensus 373 g~alg~~i~g~iL~~~G 389 (460)
T PRK11462 373 GLAFGGALIGWMLAYGG 389 (460)
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 88899989998887654
No 114
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.86 E-value=1e-18 Score=163.61 Aligned_cols=153 Identities=12% Similarity=0.069 Sum_probs=121.6
Q ss_pred HHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-ccc-CCchhHHHHHHHHHHHHHhhhccc-hhHHHHH
Q 012500 14 LILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSH-NPFRLIGVGLSVWTFATAGCGSSF-DFWSIAI 90 (462)
Q Consensus 14 ~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~-Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~ 90 (462)
..+|.++.++ ++.++.+.+. +.+.+.....++.++.|++ ||+ ||||++..+.++..++.++.+..+ +...+++
T Consensus 30 ~~L~~yL~~~--lgls~~~a~~--i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l 105 (493)
T PRK15462 30 ALLILYLTNQ--LKYDDNHAYE--LFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYL 105 (493)
T ss_pred HHHHHHHHHh--cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHH
Confidence 3477777665 6777777555 8888889989999999999 999 999999999999999988776543 2233444
Q ss_pred HHHHhhcccccccccccchhcccCCCC--CchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHH
Q 012500 91 CRMLVGVGEASFISLAAPFIDDNAPVP--QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLA 168 (462)
Q Consensus 91 ~r~l~G~~~g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 168 (462)
+..+.++|.|...+...++++|.+|++ +|..++++...+.++|..++|.+.+++.+++|||+.|.+.++. .+..++.
T Consensus 106 ~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaig-m~l~li~ 184 (493)
T PRK15462 106 SLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVG-MIAGLVI 184 (493)
T ss_pred HHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHH-HHHHHHH
Confidence 444555667777787889999999875 6999999999999999999999999999999999999987664 3444444
Q ss_pred hhc
Q 012500 169 FVI 171 (462)
Q Consensus 169 ~~~ 171 (462)
++.
T Consensus 185 ~~~ 187 (493)
T PRK15462 185 FLC 187 (493)
T ss_pred HHH
Confidence 433
No 115
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.81 E-value=5.5e-17 Score=148.06 Aligned_cols=340 Identities=11% Similarity=0.018 Sum_probs=237.9
Q ss_pred HHHHHHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cc----cCCch-hHHHHHHHHHHHHHhhhccc
Q 012500 10 CLIGLILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CS----HNPFR-LIGVGLSVWTFATAGCGSSF 83 (462)
Q Consensus 10 ~~~~~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr----~Grr~-~l~~~~~~~~~~~~~~~~~~ 83 (462)
+..+..+..+..+. .++++...|. +...-=+--++.-|+.|.+ || +||+| .++.+.+..++.+.++-.++
T Consensus 29 ~~~~~yLl~fYTdv--~Gis~~~aG~--iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p 104 (467)
T COG2211 29 GIVVLYLLFFYTDV--FGLSAALAGT--IFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITP 104 (467)
T ss_pred HHHHHHHHHHHhcc--cCCcHHHHHH--HHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCC
Confidence 33444455555554 5677777555 6666666677888888888 85 67666 57778888888888888776
Q ss_pred h------hHHHHHHHHHhhcccccccccccchhcccCC-CCCchhHHHHHHhhhhhhhhhhhhHHHHhhc-------ccc
Q 012500 84 D------FWSIAICRMLVGVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-------HLN 149 (462)
Q Consensus 84 ~------~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-------~~g 149 (462)
+ ....++.-.+.+++.......-.++.+|+.+ ++||.+..++-+.+.++|..+...+...+.. ..|
T Consensus 105 ~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g 184 (467)
T COG2211 105 DFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALG 184 (467)
T ss_pred CcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhh
Confidence 3 4455667788889999888888899999885 6899999999999999997776655544432 458
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchh
Q 012500 150 WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLN 229 (462)
Q Consensus 150 wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (462)
|+..-.+.++++.+..+.+++-..|...+..+.++.
T Consensus 185 ~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~-------------------------------------------- 220 (467)
T COG2211 185 YQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTG-------------------------------------------- 220 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCccccCccc--------------------------------------------
Confidence 999999999988888888887766543321111100
Q ss_pred hhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchhhhh-hhHHHhhhhhhhhhhHHHhhhc
Q 012500 230 QLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFG-GVTIVCGIVGTISGGFILDQMG 308 (462)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~~ 308 (462)
..++..+++..+++|+.+...++...+.....+........|.+...+.++...... .....+.+++.++..++.+|+|
T Consensus 221 ~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~g 300 (467)
T COG2211 221 VKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFG 300 (467)
T ss_pred ccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhc
Confidence 001112346678899999998887777777777777777777776666664444333 4444555666889999999999
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHhccccceeeeeccCCc-------chhhHHHHHH
Q 012500 309 ATISNAFKLLSAATFLGAISCLTAFCLS--SLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-------SLRALSMAIS 379 (462)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 379 (462)
+| +....+.++.++......+.+ +....++..++.+++.+...+...+++++..+- +..|...|..
T Consensus 301 kk-----~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~ 375 (467)
T COG2211 301 KK-----KLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGM 375 (467)
T ss_pred hH-----HHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHH
Confidence 99 888777777777666665554 455555555777777777776666666664432 3446677776
Q ss_pred HHHHhhhccccchhHHHHHHhhhc
Q 012500 380 TVSIHIFGDVPSSPLVGVLQDHVN 403 (462)
Q Consensus 380 ~~~~~~~g~~~~~~~~g~l~~~~g 403 (462)
. +..-+|.+++..+.|++.+..|
T Consensus 376 t-F~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 376 T-FFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHcC
Confidence 4 4455588999989999988776
No 116
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.79 E-value=1.1e-17 Score=148.46 Aligned_cols=320 Identities=14% Similarity=0.103 Sum_probs=217.9
Q ss_pred hhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccc------hhH--HHHHHHHHhhcccccccccc
Q 012500 36 SVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSF------DFW--SIAICRMLVGVGEASFISLA 106 (462)
Q Consensus 36 s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~------~~~--~l~~~r~l~G~~~g~~~~~~ 106 (462)
-|....|++.++..+.++-|+ ||+|-|...+++..+.++|+.+-..+. .++ ....+..+.+.++-.....-
T Consensus 82 ~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lP 161 (480)
T KOG2563|consen 82 DWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLP 161 (480)
T ss_pred HHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccc
Confidence 358899999999999999999 999999999999999999999877653 344 66788899998888777766
Q ss_pred cchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhccc------chHH--HHHHHHHHHHHHHHHHhhccccccCC
Q 012500 107 APFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL------NWRY--AFWGEAILMLPFAVLAFVIKPLQLKG 178 (462)
Q Consensus 107 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~------gwr~--~f~~~~~~~~~~~~~~~~~~p~~~~~ 178 (462)
..+..-||+++||..+..+-..+..+|.++|.++...+..+- .|-. .|+..++++.+..++..+..++.|+.
T Consensus 162 skiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~t 241 (480)
T KOG2563|consen 162 SKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPT 241 (480)
T ss_pred cHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 777888999999999999999999999999998888777543 4654 35545544444444444443332221
Q ss_pred CCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHH
Q 012500 179 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN 258 (462)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (462)
. ++..... ....++.++.++.++++++....+.+....
T Consensus 242 P--ps~s~~~----------------------------------------~~~~~f~~si~~~~~n~~F~il~~~ygi~~ 279 (480)
T KOG2563|consen 242 P--PSASQAA----------------------------------------LQDASFPKSIKSCFKNRQFIILAICYGIGL 279 (480)
T ss_pred C--CchhHhh----------------------------------------hhcCcHHHHHHHHHcCccHHHHHHHHhhhH
Confidence 1 1110000 000123567889999999999888777776
Q ss_pred HHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHH---
Q 012500 259 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC--- 334 (462)
Q Consensus 259 ~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 334 (462)
..+++..+.+-..+... +.+.... ....+..+++++++++.|.+.||.++-+ ..............+....
T Consensus 280 g~F~~l~~~l~~~l~~s-gY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk----~~~~v~~~~~~v~~~~l~~~t~ 354 (480)
T KOG2563|consen 280 GLFNSLSTLLNLALCPS-GYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFK----LTTLVLYLFALVGTLMLLTCTL 354 (480)
T ss_pred HHHHHHHHHhhhccccc-cCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHH----HHHHHHHHHHHHHHHHHHHhhc
Confidence 66666666555333332 2332222 4456778888999999999999987642 2222222222222111111
Q ss_pred -hhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhc
Q 012500 335 -LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 403 (462)
Q Consensus 335 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g 403 (462)
....+.......+.|++.....|.-.-+..|...|..-++..|+.+...+.++ ++-.++.+...+..+
T Consensus 355 ~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~-~~~~~~~~~~~~~~~ 423 (480)
T KOG2563|consen 355 FLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFG-VILVFIMGILAEDLG 423 (480)
T ss_pred cCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHH-HHHHHHHHHHhhccC
Confidence 12344455566667777778888888888998888777888888876666644 344556666666554
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.69 E-value=1.2e-14 Score=131.73 Aligned_cols=367 Identities=11% Similarity=0.094 Sum_probs=205.6
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cc-cCCchhHHHHHHHHHHHHHhhhccc--hhHHHHHHHHHhhccccc
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CS-HNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEAS 101 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr-~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~g~ 101 (462)
++.++++... +.+.|.--.-....+.|++ || .|+|+.+..|.++..+|-++.+.++ +...++++-.+.++|.|.
T Consensus 56 Lg~~~~~A~~--l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl 133 (498)
T COG3104 56 LGFDETHATG--LFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGL 133 (498)
T ss_pred CCcChHhhHH--HHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcccc
Confidence 4577776544 5566655555677778888 88 6999999999999999999999985 788999999999999999
Q ss_pred ccccccchhcccCCCC--CchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccccccCCC
Q 012500 102 FISLAAPFIDDNAPVP--QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 179 (462)
Q Consensus 102 ~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 179 (462)
.-+...++++|.+|++ +|-..++++.++.++|+.++|.+.+++.+++||+..|...++-.....+. +...++.....
T Consensus 134 ~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~-f~~~~r~~~~~ 212 (498)
T COG3104 134 FKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVI-FLLGRRHVKGI 212 (498)
T ss_pred ccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH-HHHccchhcCC
Confidence 9999999999999854 47778999999999999999999999999999999999988765544443 43334333222
Q ss_pred CCccccccccccccccccccccc---cccccccccchhhhhhhh-ccccccc---h--hhhhcchhhHHHHhh-hhHHHH
Q 012500 180 APAESGKAQVVASVSEGSEASNL---NDHVSEDISDQASERSIK-SIGESRF---L--NQLSQFSQDTKVLLQ-EKVYVV 249 (462)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~---~--~~~~~~~~~~~~~~~-~~~~~~ 249 (462)
..++++.....+.........-. ..........+....... ....... . .++++..+..++++. -+.+..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~ 292 (498)
T COG3104 213 GGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLF 292 (498)
T ss_pred CCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHH
Confidence 21121111111000000000000 000000000000000000 0000000 0 000000001111110 011111
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHH-hCCCcchhhhhhhHHHhhhhhhhhhhHHHhhhcccccc--chhHHHHHHHHHH
Q 012500 250 NVLGYIAYNFVIGAYSYWGPKAGYNI-YHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISN--AFKLLSAATFLGA 326 (462)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~--~~~~~~~~~~~~~ 326 (462)
..+.+.++......+..+.....++. +|.+-....+-++..+.-++..++..++..|.+++.+. ...-+..+..++.
T Consensus 293 ~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g 372 (498)
T COG3104 293 AVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAG 372 (498)
T ss_pred HHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHH
Confidence 11222222222333333333333333 23332233444555566666676777777775444222 1122223333333
Q ss_pred HHHHHHHHh----------hhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHH
Q 012500 327 ISCLTAFCL----------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVG 396 (462)
Q Consensus 327 ~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g 396 (462)
...+..... .+.++.+....+..++--+..+...+.+.+..|+...+..+++. ...+..|..++..+.+
T Consensus 373 ~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~w-fLt~a~~~~l~g~va~ 451 (498)
T COG3104 373 LGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMW-FLTVAAGQTLGGQVAG 451 (498)
T ss_pred HHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHH-HHHHHHHHHhhceecc
Confidence 322222221 14566677777788888788888899999999999999998887 4444446555554444
No 118
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.67 E-value=1.1e-16 Score=126.90 Aligned_cols=137 Identities=27% Similarity=0.321 Sum_probs=125.1
Q ss_pred hHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccccccchhcccCCC
Q 012500 38 NVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPV 116 (462)
Q Consensus 38 ~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~ 116 (462)
..+.+.++..+++++.|++ ||+|||+.+..+..+..++.+...+.++++.+.+.+++.|++.+...+....++.|.+|+
T Consensus 3 ~~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 82 (141)
T TIGR00880 3 LLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPP 82 (141)
T ss_pred EEEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCh
Confidence 4566778889999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhcccc
Q 012500 117 PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 174 (462)
Q Consensus 117 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 174 (462)
++|++.+++.+....+|..+++.+++.+.+..+|++.|++.++..++..+..++..||
T Consensus 83 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 83 EERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999999999999999999999988877777766666554
No 119
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.66 E-value=3.7e-15 Score=138.59 Aligned_cols=318 Identities=11% Similarity=0.051 Sum_probs=217.5
Q ss_pred HHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccc--cccccccchhcccCCCC
Q 012500 41 EFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA--SFISLAAPFIDDNAPVP 117 (462)
Q Consensus 41 ~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g--~~~~~~~~~i~~~~~~~ 117 (462)
...+..++.++..|.+ ||+|||..+....+...+..+...+.. |++++ +.|+..+ .......++++|....+
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~--~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~ 144 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG--YWFFL---LLGLSGGFSAIFSVGFAYVADISSEE 144 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH--HHHhh---hcccccchhhhhhhhhhheeeccchh
Confidence 4467888999999999 999999999999999888888877776 33333 5554333 46677888999999999
Q ss_pred CchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCcc-ccccccccccccc
Q 012500 118 QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAE-SGKAQVVASVSEG 196 (462)
Q Consensus 118 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~ 196 (462)
+|....++.......+..++|.+++.+.+..|.-.+|++..+..+...+...+.+||+..+..+++ ..+....
T Consensus 145 ~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~------ 218 (463)
T KOG2816|consen 145 ERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTP------ 218 (463)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCC------
Confidence 999999999999999999999999999999999999999999998888888888898765543321 0000000
Q ss_pred cccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHH-HHHHHhhHHHHHH
Q 012500 197 SEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIG-AYSYWGPKAGYNI 275 (462)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~ 275 (462)
. +. .. ....+..+..+..-.+|..+.+.+..+....... ...-..+.|+...
T Consensus 219 ---~-------~~-~~----------------~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~ 271 (463)
T KOG2816|consen 219 ---G-------SL-DS----------------SHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAK 271 (463)
T ss_pred ---C-------cc-cc----------------hhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeee
Confidence 0 00 00 0000001111121123334443433333333322 2221446788888
Q ss_pred hCCCcchhh-hhhhHHHhhhhhhhhhh-HHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 012500 276 YHMSNADMM-FGGVTIVCGIVGTISGG-FILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVF 353 (462)
Q Consensus 276 ~~~~~~~~~-~~~~~~~~~~~~~~~~g-~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (462)
+++++.... +.+.......++.++.. .+...++.+ +.+..+...-........+..+.|..+....+ .....
T Consensus 272 f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~-----~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~-~~~~~ 345 (463)
T KOG2816|consen 272 FGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEK-----RLISLGLLSEFLQLLLFAFATETWMMFAAGVV-VALAG 345 (463)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hHhhHHHHHHHHHHHHHHHhccchhhhHHHHH-HHhhc
Confidence 999977663 55666667777776665 677778877 65555555555555555556666655444443 34444
Q ss_pred hccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhc
Q 012500 354 ATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 403 (462)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g 403 (462)
...+...+.......++++|++.++...... +...++|.+.+.+...+.
T Consensus 346 ~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~-l~~~~~~~~~~~i~~~t~ 394 (463)
T KOG2816|consen 346 IVFPAIRAFASILVSPEEQGKVFGIISGIEG-LSGVVSPALYGNIFALTL 394 (463)
T ss_pred chhHHHHhHHHhhcccccccchhhHHHHHHH-HhhhhhHHHHHHHHHHHH
Confidence 5667778888888999999999999965544 488899999988876653
No 120
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.66 E-value=1.6e-13 Score=122.08 Aligned_cols=314 Identities=14% Similarity=0.052 Sum_probs=210.4
Q ss_pred hHHHHHHHHHhhhhhhccc-cccC-----CchhH-HHHHHHHHHHHHhhhcc-----c-------hh--H--HHHHHHHH
Q 012500 38 NVLEFTVTQLVCSSHHCSQ-CSHN-----PFRLI-GVGLSVWTFATAGCGSS-----F-------DF--W--SIAICRML 94 (462)
Q Consensus 38 ~~~~~~~~~~~~~~~~g~l-dr~G-----rr~~l-~~~~~~~~~~~~~~~~~-----~-------~~--~--~l~~~r~l 94 (462)
......+.+ ...+..|+. |+.+ ||..+ ..|.++...+..+.+++ . +. + ...+.-.+
T Consensus 20 lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l 98 (403)
T PF03209_consen 20 LVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFLL 98 (403)
T ss_pred HHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHH
Confidence 444444433 468899999 9998 77654 55666666665555542 2 12 2 23456678
Q ss_pred hhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHH---HHHHHHHHHHHHHHHHhhc
Q 012500 95 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRY---AFWGEAILMLPFAVLAFVI 171 (462)
Q Consensus 95 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~---~f~~~~~~~~~~~~~~~~~ 171 (462)
.|+|.+...+...++++|..|+|+|+++.++.....-+|.+++..+.+.+.+.+.-.- ++...+++.+...++..+-
T Consensus 99 ~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~~ia~wg 178 (403)
T PF03209_consen 99 YGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLLNLIALWG 178 (403)
T ss_pred HHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999999999999999999998887665222 2222222222222222222
Q ss_pred cccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHH
Q 012500 172 KPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNV 251 (462)
Q Consensus 172 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (462)
.|.+.....+.++ ++..++.+.++++..+|+.....
T Consensus 179 -~E~r~~~~~~~~~-------------------------------------------~~~~~f~~a~~~~~~~~~a~~f~ 214 (403)
T PF03209_consen 179 -QEPRRSRRAAAAE-------------------------------------------RPRPPFREAWRQVWASPQARRFF 214 (403)
T ss_pred -cccCCcccccCCC-------------------------------------------CCCccHHHHHHHHHhCCChhHHH
Confidence 2211111010000 00011234566777888888887
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhh-hccccccchhHHHHHHHHHHHH-
Q 012500 252 LGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKLLSAATFLGAIS- 328 (462)
Q Consensus 252 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~- 328 (462)
...+.....++.-...+-.|--+.++++..+. .+......+..+|....|++..| .+++ +....++..+..+
T Consensus 215 ~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~-----~~a~~G~~~~~~~f 289 (403)
T PF03209_consen 215 VFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKK-----RTAALGCLLGALAF 289 (403)
T ss_pred HHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCch-----HHHHHHHHHHHHHH
Confidence 77777777776667777778899999997655 66677788888999899987764 3333 3333333333333
Q ss_pred --HHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhh
Q 012500 329 --CLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 402 (462)
Q Consensus 329 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~ 402 (462)
.......++.+......+++|++.+.......+.+.+...++..|..+|.-...+.. +..++..+.|.+.|..
T Consensus 290 ~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~-A~Glg~~~GG~~~D~~ 364 (403)
T PF03209_consen 290 ALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAI-ARGLGTFLGGALRDLV 364 (403)
T ss_pred HHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 233334456778888888899999887777788888888888899999998544444 7778888888887764
No 121
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.57 E-value=1.2e-13 Score=126.70 Aligned_cols=353 Identities=12% Similarity=0.132 Sum_probs=207.4
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCC-chhHHHHHHHHHHHHHhh-hc---cc-hhHHHHHHHHHhhcc
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNP-FRLIGVGLSVWTFATAGC-GS---SF-DFWSIAICRMLVGVG 98 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Gr-r~~l~~~~~~~~~~~~~~-~~---~~-~~~~l~~~r~l~G~~ 98 (462)
++.+.+..-.|++.++..++.++++|..|.. .|.+. |+.++.+.++..++.++. ++ .+ ..+.++++|++.|+|
T Consensus 64 lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg 143 (488)
T KOG2325|consen 64 LDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVG 143 (488)
T ss_pred cCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcC
Confidence 4444444445679999999999999999999 88886 888999999999999988 33 23 678899999999999
Q ss_pred cccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcc----------c---chHHHHHHHHHHHHHHH
Q 012500 99 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH----------L---NWRYAFWGEAILMLPFA 165 (462)
Q Consensus 99 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~----------~---gwr~~f~~~~~~~~~~~ 165 (462)
.| ......+|+++-...++|.++++....+..+|.++||.++..+..- . -+..+-|+.+++.++..
T Consensus 144 ~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~ 222 (488)
T KOG2325|consen 144 VG-NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYI 222 (488)
T ss_pred cc-cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHH
Confidence 88 4556789999988889999999999999999999999887665531 1 13456677778777877
Q ss_pred HHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhh
Q 012500 166 VLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEK 245 (462)
Q Consensus 166 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (462)
+...+...|..++..+++.++.. +++.+.++.+ ..+ +...
T Consensus 223 v~i~~~f~E~~~~~~~~~~~~~~-----------------------~~~~~~~~~~---------------~~~--~d~~ 262 (488)
T KOG2325|consen 223 VIILFFFKEVYRGIIDKKKRSVE-----------------------EEKSDIEKVK---------------KPK--LDWV 262 (488)
T ss_pred HHHHhheeecccCccccccccch-----------------------hhccchhhhc---------------cCC--hhHH
Confidence 77777776654443211111100 0000000000 000 0112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhh-hhHHHhhhhhh-hhhhHHHhhhccccccchhHHHHHH
Q 012500 246 VYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFG-GVTIVCGIVGT-ISGGFILDQMGATISNAFKLLSAAT 322 (462)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~-~~~g~l~d~~~~~~~~~~~~~~~~~ 322 (462)
..+.+.+..+...+......+..+.+....++++.... ... ....+.+++.. +...+..-|.++...+ ..+....
T Consensus 263 ~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r--~~~~~g~ 340 (488)
T KOG2325|consen 263 AVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKR--RIILLGF 340 (488)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccc--eeeeehH
Confidence 22333344444555555545666666677777775443 222 22333333222 2333333444331111 2332222
Q ss_pred HHHHHHHHHH-HHh---h---------------------------hhHHHHHH-HHHHHHHHHhccccceeeeeccCCcc
Q 012500 323 FLGAISCLTA-FCL---S---------------------------SLYGFLAL-FTVGELLVFATQAPVNYVCLHSVKPS 370 (462)
Q Consensus 323 ~~~~~~~~~~-~~~---~---------------------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (462)
+.......+. ... . +.+..+.. ..++|...-.......+..++...|+
T Consensus 341 l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~ 420 (488)
T KOG2325|consen 341 LIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPR 420 (488)
T ss_pred HHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCc
Confidence 2222221111 100 0 00111111 11122222233445677778889999
Q ss_pred hhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHHHHHHHHH
Q 012500 371 LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 423 (462)
Q Consensus 371 ~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 423 (462)
.+++..+... ..+..+..++|.+........| ++..+.+..+..++...++
T Consensus 421 ~q~~~qg~~~-~~~s~~~~~~~~~~t~~~~~~g-~~~v~~~~~~~~l~~~~l~ 471 (488)
T KOG2325|consen 421 DQGTMQGVFS-ISGSIARVVGPIFSTAIFTLSG-PRPVWIILLCLLLVVAALW 471 (488)
T ss_pred cccceeEEEE-eccchhhhhhHHHHhhhHHhcC-ccHHHHHHHHHHHHHHHHH
Confidence 9999999985 4455588899988887777766 5565555555544444433
No 122
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.57 E-value=1.1e-12 Score=118.27 Aligned_cols=362 Identities=12% Similarity=0.028 Sum_probs=226.0
Q ss_pred hHHHHHHHHHHH----------hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHH
Q 012500 4 CIHVLLCLIGLI----------LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVW 72 (462)
Q Consensus 4 ~i~~~~~~~~~~----------~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~ 72 (462)
....++|.+|++ .| ++.+.+ .++++.|+.. -+.-...-.++....+...+ |..+.|++++++.+..
T Consensus 5 ~~~~llc~~gf~~~frPsEPfl~~-yL~~~~-kn~T~~qv~~-~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~ 81 (412)
T PF01770_consen 5 KITLLLCLFGFFKEFRPSEPFLTP-YLTGPD-KNFTEEQVNN-EIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSY 81 (412)
T ss_pred HHHHHHHHHHHHHhcCCCCccchH-HHcCCc-cCCCHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 566788999988 23 333221 3566655432 12233333455666677777 8889999999999999
Q ss_pred HHHHHhhhccchhHHHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhc--ccch
Q 012500 73 TFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS--HLNW 150 (462)
Q Consensus 73 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~--~~gw 150 (462)
.+...+.-+.++...+-+..+.-|++.+. ..+-.+++-...|+++-.++.+...++..+|..++..+|..+.. ..+.
T Consensus 82 i~t~~lll~~~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy 160 (412)
T PF01770_consen 82 IITWLLLLFGTSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSY 160 (412)
T ss_pred HHHHHHHHHHCcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 99999999999999999999999999885 66778999999999999999999999999999999999988775 3446
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhh
Q 012500 151 RYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQ 230 (462)
Q Consensus 151 r~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (462)
+...++......+..+..++ +|..++..--+++.+.... ..+.+.++.+ +..+++.+..+.+...+......
T Consensus 161 ~~L~~isl~~~~~a~~~~~f-LP~~~~S~~f~r~~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 232 (412)
T PF01770_consen 161 FQLNYISLASVSLALLIALF-LPMPKRSLFFHRKPPAEQD---ANESESDKMN----ESPESSSSTEKSPSTESSSRKSV 232 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHH-cCCCCcccceeccCccccc---cccccccccc----cccccccccccCcccccchHHHH
Confidence 66666655443344343344 4543321111111000000 0000000000 00000000001111111112234
Q ss_pred hhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh---hhhhhHHHhhhhhhhhhhHHHhhh
Q 012500 231 LSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM---MFGGVTIVCGIVGTISGGFILDQM 307 (462)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~ 307 (462)
.+..++++++..++|.++...+-+.+...+..-+.+|.....++....+.... ..-+...+.+.++.+..|++..++
T Consensus 233 l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w 312 (412)
T PF01770_consen 233 LRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNW 312 (412)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcch
Confidence 45667788888999999988888888888888788877776666511121111 222455566666777888875555
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHH
Q 012500 308 GATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAIST 380 (462)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (462)
.+.. ...+.....+.+.+++++...++.|...+..++.........+....-++.....+.-+...|+.+
T Consensus 313 ~~~~---~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNt 382 (412)
T PF01770_consen 313 DRWG---ELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINT 382 (412)
T ss_pred HHHH---HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHH
Confidence 4431 033344555566666777777888888888888777777666665556666666666666666664
No 123
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.56 E-value=5.8e-14 Score=131.74 Aligned_cols=377 Identities=11% Similarity=0.014 Sum_probs=212.7
Q ss_pred hhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-ccc-----CCchhHHHHHHHHHHHHHhhhcc----chhHHH
Q 012500 19 SMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSH-----NPFRLIGVGLSVWTFATAGCGSS----FDFWSI 88 (462)
Q Consensus 19 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~-----Grr~~l~~~~~~~~~~~~~~~~~----~~~~~l 88 (462)
+.+++ ++.++.+... ..+...+.- ..-|+.|.+ |.+ .||+-++++.++..++.+..+.. .+....
T Consensus 15 ~l~~~--l~ls~~~~~~--~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~ 89 (433)
T PF03092_consen 15 FLKDD--LGLSPAQLQR--LSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIA 89 (433)
T ss_pred HHHHH--cCCCHHHHHH--HHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhH
Confidence 44444 7788877554 555555443 335667777 766 35556677777776666555543 356666
Q ss_pred HHHHHHhhcccccccccccchhcccCC--CCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHH
Q 012500 89 AICRMLVGVGEASFISLAAPFIDDNAP--VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAV 166 (462)
Q Consensus 89 ~~~r~l~G~~~g~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~ 166 (462)
.+.-++..+|.+....++.+++.|... +++||...+.......+|.+++..++|.+.+..++|..|.+.+++..+..+
T Consensus 90 ~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~ 169 (433)
T PF03092_consen 90 VVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLI 169 (433)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHH
Confidence 777788889999999999999999884 344788888999999999999999999999999999999999888777777
Q ss_pred HHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhH
Q 012500 167 LAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKV 246 (462)
Q Consensus 167 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (462)
..+++.+|.. .. ++++..... ++..+. .....++..+..++.++.+.
T Consensus 170 ~~~~~~~e~~-~~-~~~~~~~~~------------------~~~~~~-------------~~~~~~~~~~~l~~~~~~~~ 216 (433)
T PF03092_consen 170 VALFLLEERK-VR-PADEVFSFG------------------KEEVPC-------------LFGSFREQLSELWRALQQRA 216 (433)
T ss_pred HHHHhhhhcc-cc-ccchhhccc------------------ccccch-------------hhHHHHHHHHHHHHHHhhhH
Confidence 6666665521 11 111000000 000000 00112233455677778888
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHhhHHHHHHhC---CCcchhh-hhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHH
Q 012500 247 YVVNVL-GYIAYNFVIGAYSYWGPKAGYNIYH---MSNADMM-FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA 321 (462)
Q Consensus 247 ~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 321 (462)
++...+ ..++............-.+..+..+ +++.... ...+..++.++|..+..+...+..-| +++...
T Consensus 217 i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R-----~~~~~t 291 (433)
T PF03092_consen 217 IWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWR-----RIFVVT 291 (433)
T ss_pred HHHHHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH-----HHHHHH
Confidence 777666 2222222211100000001112222 3332221 11233333444444433333222222 455444
Q ss_pred HHHHHHHHHHHH-H---------hhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccc
Q 012500 322 TFLGAISCLTAF-C---------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPS 391 (462)
Q Consensus 322 ~~~~~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 391 (462)
.++.....+.-. . .++.+..+.-..+........+.+....+.+..|+...|+..++.....|. |..++
T Consensus 292 ~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nl-g~~~s 370 (433)
T PF03092_consen 292 TLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNL-GSSVS 370 (433)
T ss_pred HHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHH-HHHHH
Confidence 444333222111 0 122233334445555556666667777889999999999999999767776 88888
Q ss_pred hhHHHHHHhhhc----chhHHHHHHHHHHHHHHHHHHHHHhhccccccchhh
Q 012500 392 SPLVGVLQDHVN----NWRKTTLALTSIFFLAAGIWFVGIFLKSIDKFNEDG 439 (462)
Q Consensus 392 ~~~~g~l~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (462)
..++..+.+..+ ++........+..++..+.+.+...++++++..|+.
T Consensus 371 ~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~lLp~~~~~~~~~ 422 (433)
T PF03092_consen 371 STLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFLLPPQKRITDEL 422 (433)
T ss_pred HHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHHcCCCchhhHHH
Confidence 888888887765 222223333333333333333334556655444433
No 124
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.54 E-value=4.2e-14 Score=133.10 Aligned_cols=140 Identities=16% Similarity=0.208 Sum_probs=122.8
Q ss_pred hhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccc----hhHHHHHHHHHhhcccccccccccchh
Q 012500 36 SVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSF----DFWSIAICRMLVGVGEASFISLAAPFI 110 (462)
Q Consensus 36 s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~G~~~g~~~~~~~~~i 110 (462)
+...+...++.+++.++.|++ ||+|||+++..+.++.+++..+..... +++.+++.+++.|++.+...+....++
T Consensus 254 g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i 333 (418)
T TIGR00889 254 SIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFV 333 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 558888888999999999999 999999999999999988877666632 346678899999999998888889999
Q ss_pred cccCCCCCchhHHHHHH-hhhhhhhhhhhhHHHHhhcc------cchHHHHHHHHHHHHHHHHHHhhccccc
Q 012500 111 DDNAPVPQKTAWLSMFY-MCIPTGVALGYVYGGVVGSH------LNWRYAFWGEAILMLPFAVLAFVIKPLQ 175 (462)
Q Consensus 111 ~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~------~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 175 (462)
.|++|+++|++++++.+ ...++|..+||.++|.+.++ +||+..|.+.+++.++..++.+++.||+
T Consensus 334 ~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 334 EKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999999999997 67889999999999999887 4699999999998888888888887765
No 125
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.53 E-value=8.1e-14 Score=134.28 Aligned_cols=159 Identities=8% Similarity=-0.074 Sum_probs=116.1
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHh---hhccchhHHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAG---CGSSFDFWSIAIC 91 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~---~~~~~~~~~l~~~ 91 (462)
+|.++++. ++.+..+... ......++..++.+..|++ ||+|||+++..+.++..++.+. ...+++...++++
T Consensus 273 ~p~~l~~~--~g~s~~~~~~--~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (490)
T PRK10642 273 MPSYLSHN--LHYSEDHGVL--IIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAG 348 (490)
T ss_pred HHHHHHHh--cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 67676554 4555544333 6777889999999999999 9999999988887654433322 2234567788889
Q ss_pred HHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhccc-chHHHHHHHHHHHHHHHHHHhh
Q 012500 92 RMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFV 170 (462)
Q Consensus 92 r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~ 170 (462)
|++.|++.+........++.|.+|++.|++++++......++..++|.+.+++.+.. +|+.+++...+.+++..+..+
T Consensus 349 ~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~- 427 (490)
T PRK10642 349 LLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGV- 427 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-
Confidence 999998777666777788899999999999999754445566678888888887754 478777776666655555444
Q ss_pred ccccccCCC
Q 012500 171 IKPLQLKGF 179 (462)
Q Consensus 171 ~~p~~~~~~ 179 (462)
+.||++++.
T Consensus 428 ~~pes~~~~ 436 (490)
T PRK10642 428 TMKETANRP 436 (490)
T ss_pred HhccccCCC
Confidence 458887764
No 126
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.47 E-value=9.4e-13 Score=116.69 Aligned_cols=174 Identities=17% Similarity=0.183 Sum_probs=145.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHH
Q 012500 243 QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA 321 (462)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 321 (462)
|.+.+....+.+..+++.--.+..-.|...++ .+++..+. .+.+...+..-++.++.|.++||.+.| ..+..+
T Consensus 27 r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~-~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr-----~fm~~g 100 (448)
T COG2271 27 RIQIFLSIFIGYAAFYLTRKNFNLAMPALIED-GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPR-----YFMAFG 100 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCc-----eeehHH
Confidence 44556666777777777777777777766655 56776666 555888999999999999999999999 888999
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHH--HHHH
Q 012500 322 TFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV--GVLQ 399 (462)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--g~l~ 399 (462)
.+++++..++..+.++.+...++..+.+.+-+.++|+....+.+-+++++||+..++-|...|. |+.+.|++. +++.
T Consensus 101 Lilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNi-GGal~~~~~~la~~~ 179 (448)
T COG2271 101 LILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNI-GGALAPLVALLAFFA 179 (448)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhc-ccchHHHHHHHHHHH
Confidence 9999998888888889999999999999999999999999999999999999999999988888 888888888 8888
Q ss_pred hhhcchhHHHHHHHHHHHHHHHHHH
Q 012500 400 DHVNNWRKTTLALTSIFFLAAGIWF 424 (462)
Q Consensus 400 ~~~g~~~~~~~~~~~~~~~~~~~~~ 424 (462)
++. +|+..|++-+++.++..++.+
T Consensus 180 ~~~-~w~~~f~~pgiiaiival~~~ 203 (448)
T COG2271 180 FHG-GWRAAFYFPGIIAIIVALILL 203 (448)
T ss_pred hcc-chhHHHHHHHHHHHHHHHHHH
Confidence 775 598999988887666555443
No 127
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.45 E-value=6.7e-13 Score=124.94 Aligned_cols=135 Identities=16% Similarity=0.109 Sum_probs=120.4
Q ss_pred hHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccccccchhcccCCC
Q 012500 38 NVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPV 116 (462)
Q Consensus 38 ~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~ 116 (462)
..+.+.++..++.++.|++ ||+|+|+.+..+..+.+++.++..+.+|.+.+++.+++.|++.+...+.....+.|.+|+
T Consensus 254 ~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~ 333 (399)
T PRK05122 254 ALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPP 333 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCH
Confidence 6677888888999999999 999999999999999888888888888988888999999999998888877888899999
Q ss_pred CCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhcc
Q 012500 117 PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 172 (462)
Q Consensus 117 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 172 (462)
++|+++.++++....+|..+++.+.+.+.++.||++.|++.+++.++..+..++..
T Consensus 334 ~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (399)
T PRK05122 334 QNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLY 389 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999998888777666655553
No 128
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.44 E-value=2.2e-13 Score=134.26 Aligned_cols=137 Identities=9% Similarity=-0.077 Sum_probs=118.9
Q ss_pred hHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccccccchhcccCCC
Q 012500 38 NVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPV 116 (462)
Q Consensus 38 ~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~ 116 (462)
......++.+++.++.|++ ||+|||++++.+.++.+++.++.+++++...+++.+++.|++.+..++...++++|++|.
T Consensus 600 ~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt 679 (742)
T TIGR01299 600 VNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPS 679 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH
Confidence 4566778899999999999 999999999999999999999999999888888899999998888889999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhcccccc
Q 012500 117 PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL 176 (462)
Q Consensus 117 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 176 (462)
++|++++|+.+....+|.++||.+++.+.+. +...+|++.++..++.+++.++ +||+.
T Consensus 680 ~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~-LPET~ 737 (742)
T TIGR01299 680 DKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALK-LPDTR 737 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHh-CCCCc
Confidence 9999999999999999999999999988764 4567888887776665555554 47754
No 129
>PRK10054 putative transporter; Provisional
Probab=99.44 E-value=3.7e-12 Score=119.25 Aligned_cols=168 Identities=10% Similarity=0.016 Sum_probs=124.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHH
Q 012500 245 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 323 (462)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 323 (462)
+.++.+.+..++..........++|.++++.+|.+..+. ...+...++.+++.+..|+++||+||| +.+..+..
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k-----~~~~~~~~ 81 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKK-----RYMLLAIT 81 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc-----hhHHHHHH
Confidence 445666667777888888888899999999899987666 444666788888999999999999998 77766666
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhc
Q 012500 324 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 403 (462)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g 403 (462)
............++.+..+....+.+...+...+.......+..|+++|+++.|+.+...+. |.+++|.+.+.+.+ .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l-g~~igp~l~~~l~~-~- 158 (395)
T PRK10054 82 AFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNI-GWTVGPPLGTLLVM-Q- 158 (395)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH-h-
Confidence 55555555555566655555555555555555556677778888899999999999777666 99999999998875 3
Q ss_pred chhHHHHHHHHHHHHHH
Q 012500 404 NWRKTTLALTSIFFLAA 420 (462)
Q Consensus 404 ~~~~~~~~~~~~~~~~~ 420 (462)
+++..+...+++.++..
T Consensus 159 g~~~~f~~~~~~~~i~~ 175 (395)
T PRK10054 159 SINLPFWLAAICSAFPL 175 (395)
T ss_pred ccCcHHHHHHHHHHHHH
Confidence 47777776665554443
No 130
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.44 E-value=4.2e-13 Score=127.04 Aligned_cols=137 Identities=9% Similarity=0.014 Sum_probs=121.0
Q ss_pred hhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccccccchhcccC
Q 012500 36 SVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNA 114 (462)
Q Consensus 36 s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~ 114 (462)
+++.+...++..++.++.|++ ||+|+|+.+..+.++.+++..+.++++|.+.+++.+++.|++.+...+....++.|.+
T Consensus 265 g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 344 (420)
T PRK09528 265 GYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNF 344 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 458888888899999999999 9999999999999999999999999999999999999999998887777888999999
Q ss_pred CCCCchhHHHH-HHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhcc
Q 012500 115 PVPQKTAWLSM-FYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 172 (462)
Q Consensus 115 ~~~~r~~~~~~-~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 172 (462)
|++.|+...+. ++....+|.++++.+.|++.+..|||..|.+.+++.++..++.++..
T Consensus 345 ~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~ 403 (420)
T PRK09528 345 DVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTL 403 (420)
T ss_pred CccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHh
Confidence 99999887665 67778899999999999999999999999998888776666665554
No 131
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.43 E-value=6.4e-12 Score=119.32 Aligned_cols=165 Identities=16% Similarity=0.186 Sum_probs=124.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHH
Q 012500 245 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 323 (462)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 323 (462)
+.++...+.+++.+.....+..+.|.+.++ +|.++.+. .+.+...++..++.++.|++.||+|+| +.+..+.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r-----~~~~~~~~ 96 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNAR-----YFMGIGLI 96 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCc-----hhHHHHHH
Confidence 334444454555555555667778877765 78886655 445778888899999999999999998 77777777
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhc
Q 012500 324 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 403 (462)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g 403 (462)
+.....+.....++.+......++.+++.+...+.....+.+.+|+++|+++.++.+...+. |..++|.+.+++.+..|
T Consensus 97 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~-g~~~~~~~~~~l~~~~g 175 (434)
T PRK11663 97 ATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNV-GGALIPLVVGAIALHYG 175 (434)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHccc
Confidence 77766666666667776666666777777777777788888889999999999999766665 99999999999998766
Q ss_pred chhHHHHHHHHHHH
Q 012500 404 NWRKTTLALTSIFF 417 (462)
Q Consensus 404 ~~~~~~~~~~~~~~ 417 (462)
|+..+...++..+
T Consensus 176 -w~~~f~~~~i~~~ 188 (434)
T PRK11663 176 -WRYGMMIAGIIAI 188 (434)
T ss_pred -HHHHHHHHHHHHH
Confidence 8887776665443
No 132
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.43 E-value=8.1e-13 Score=123.83 Aligned_cols=152 Identities=13% Similarity=0.049 Sum_probs=121.1
Q ss_pred HhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 012500 15 ILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRM 93 (462)
Q Consensus 15 ~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 93 (462)
..|.+.+++ ++.++.+.+. ..+...++.+++.++.|++ ||+|||+.+..+.+...+.......+++.+.+++.++
T Consensus 238 ~~p~~l~~~--~~~~~~~~g~--~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 313 (393)
T PRK15011 238 NMPLFIINE--LHLPEKLAGV--MMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQL 313 (393)
T ss_pred HHHHHHHHH--cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 366666554 5666666544 6666667778889999999 9999999888777666665555556778888888999
Q ss_pred HhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhc
Q 012500 94 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 171 (462)
Q Consensus 94 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 171 (462)
+.+++.+...+....+..|.+| ++|++++++++...++|..+++.+++.+.++.||+..|++.+++.++..+..++.
T Consensus 314 l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 314 LNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 9888877777777788889998 5699999999999999999999999999999999999998887776655555443
No 133
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.43 E-value=1.3e-12 Score=123.55 Aligned_cols=157 Identities=13% Similarity=0.008 Sum_probs=133.8
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRML 94 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 94 (462)
.|.+.++. ++.++.+.+. ..+.+.++.+++.++.+++ ||.++++.+..+.++.+++.++..+.++.+...++.++
T Consensus 246 ~p~~~~~~--~g~~~~~~g~--~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (417)
T PRK10489 246 YPALADEV--WQMGAAQIGL--LYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLAL 321 (417)
T ss_pred hHHHHHhc--cCCChhHhHH--HHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 56565553 4556666444 8889999999999999999 99888888888888888888888888998888889999
Q ss_pred hhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhcccc
Q 012500 95 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 174 (462)
Q Consensus 95 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 174 (462)
.|++.+...+...+++.|..|+++||++++++.....+|..+|+.+.+.+.+.+|++..+++.++..++..++.....|+
T Consensus 322 ~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (417)
T PRK10489 322 FGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGE 401 (417)
T ss_pred HHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhccc
Confidence 99988877777788999999999999999999999999999999999999999999999998888777777777766665
Q ss_pred cc
Q 012500 175 QL 176 (462)
Q Consensus 175 ~~ 176 (462)
.+
T Consensus 402 ~~ 403 (417)
T PRK10489 402 LR 403 (417)
T ss_pred cc
Confidence 43
No 134
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.42 E-value=1.1e-12 Score=123.85 Aligned_cols=137 Identities=14% Similarity=0.102 Sum_probs=122.6
Q ss_pred hhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccccccchhcccC
Q 012500 36 SVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNA 114 (462)
Q Consensus 36 s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~ 114 (462)
+...+.+.++..++.+..|++ ||+|||+.+..+..+..++.+...+.++.+.+++.+++.|++.+...+...+++.+..
T Consensus 261 g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 340 (408)
T PRK09874 261 GMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNS 340 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhC
Confidence 446667788888999999999 9999999999999888888888888888899999999999999999998889999999
Q ss_pred CCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhcc
Q 012500 115 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 172 (462)
Q Consensus 115 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 172 (462)
|+++||+.+++.+....+|..+||.+++.+.++.||+..|++.+++.++..+..++..
T Consensus 341 ~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 341 SNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred CcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988877776666544
No 135
>PRK12382 putative transporter; Provisional
Probab=99.40 E-value=1.5e-12 Score=122.27 Aligned_cols=134 Identities=11% Similarity=0.049 Sum_probs=120.6
Q ss_pred hHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccccccchhcccCCC
Q 012500 38 NVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPV 116 (462)
Q Consensus 38 ~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~ 116 (462)
....+.++..+++++.|++ ||+|+|+.+..+..+.+++.++..+.++.+.+++..++.|++.+...+.....+.|.+|+
T Consensus 254 ~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 333 (392)
T PRK12382 254 TLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPS 333 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCH
Confidence 5567788888999999999 999999999999999999988888888888888999999999998888888888999999
Q ss_pred CCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhc
Q 012500 117 PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 171 (462)
Q Consensus 117 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 171 (462)
++||+++++++....+|..++|.+.+.+.++.||+..|.+.+++.++..+..++.
T Consensus 334 ~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 334 QVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999988777766665544
No 136
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.40 E-value=2e-12 Score=125.41 Aligned_cols=143 Identities=13% Similarity=0.073 Sum_probs=110.6
Q ss_pred HhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhcc--chhHHHHHH
Q 012500 15 ILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSS--FDFWSIAIC 91 (462)
Q Consensus 15 ~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~ 91 (462)
.+|.+.+++ ++.+..+.+. ..+.+.++..++.++.|++ ||+|||+++..+.++..+..+..... .+.+.+.+.
T Consensus 297 ~lp~~l~~~--~g~~~~~~g~--~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (496)
T PRK03893 297 LLPTYLKTD--LGYDPHTVAN--VLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLL 372 (496)
T ss_pred HHHHHHHhh--cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHH
Confidence 467676543 5677777555 8899999999999999999 99999999988877776665544333 344445455
Q ss_pred HHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHH
Q 012500 92 RMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILM 161 (462)
Q Consensus 92 r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~ 161 (462)
.++.+.......+..+.++.|.+|+++|++++++.+....+|..+||.+++.+.++.||+..+...+...
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~ 442 (496)
T PRK03893 373 LFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSL 442 (496)
T ss_pred HHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHH
Confidence 5555443333456677889999999999999999999999999999999999999999998886655443
No 137
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.39 E-value=1.6e-12 Score=120.11 Aligned_cols=150 Identities=18% Similarity=0.126 Sum_probs=134.3
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCch-hHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFR-LIGVGLSVWTFATAGCGSSFDFWSIAICRM 93 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 93 (462)
.|.+.++. .+.++.+.+. ......++..++.++.+++ ||+|||+ .+..+..+..++.+...+.++.+.+++..+
T Consensus 198 ~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 273 (352)
T cd06174 198 LPLYLQEV--LGLSAAEAGL--LLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALL 273 (352)
T ss_pred HHHHHHHh--cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 55555543 3556666544 8899999999999999999 9999999 999999999999999999999999999999
Q ss_pred HhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHh
Q 012500 94 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 169 (462)
Q Consensus 94 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 169 (462)
+.|++.+...+....++.|..|+++|++.+++.+....+|..+++.+.+.+.+..+|+..+++.+++.++..+..+
T Consensus 274 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 274 LLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 9999999999999999999999999999999999999999999999999999999999999999988777666544
No 138
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.38 E-value=3.4e-11 Score=105.67 Aligned_cols=232 Identities=10% Similarity=0.057 Sum_probs=148.4
Q ss_pred ccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhccccccc
Q 012500 25 FLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI 103 (462)
Q Consensus 25 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~ 103 (462)
+++.++.|.+. +.........+.+++.|.+ ||+|||+.-+.-+++.+++++ +-.++|++.++++|++.|++.....
T Consensus 63 ~yg~~~~qIa~--Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTSLLf 139 (354)
T PF05631_consen 63 SYGFSEHQIAI--LFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATSLLF 139 (354)
T ss_pred HcCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHHHHH
Confidence 36788888666 8888888999999999999 999999999999999998886 4566899999999999999999888
Q ss_pred ccccchh-cccCCCC----CchhHHHHHH-hhhhhhhhhhhhHHHHhhcccch--HHHHHHHHHHHHHHHHHHhhccccc
Q 012500 104 SLAAPFI-DDNAPVP----QKTAWLSMFY-MCIPTGVALGYVYGGVVGSHLNW--RYAFWGEAILMLPFAVLAFVIKPLQ 175 (462)
Q Consensus 104 ~~~~~~i-~~~~~~~----~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~~gw--r~~f~~~~~~~~~~~~~~~~~~p~~ 175 (462)
.+-.++. .|+-..+ ..+.-++... ...++-.+.+..++..+.+..+. ..+|.......++..+++...-+|.
T Consensus 140 S~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~EN 219 (354)
T PF05631_consen 140 SAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPEN 219 (354)
T ss_pred HHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhccccc
Confidence 8777754 5553222 2222222222 12223344455556666665544 7788887776666655554443443
Q ss_pred cCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHH
Q 012500 176 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 255 (462)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (462)
..+ +++.+ +..++..+.++.+.++|+++.+.+...
T Consensus 220 yg~---~~~~~------------------------------------------~~~~~~~~a~~~i~~d~ril~LG~~qs 254 (354)
T PF05631_consen 220 YGD---TSSSS------------------------------------------SLSGSFREAWRAILSDPRILLLGLIQS 254 (354)
T ss_pred CCC---ccccc------------------------------------------chHHHHHHHHHHHHcCchhHHHHHHHH
Confidence 211 00000 001111234667788899988888777
Q ss_pred HHHHHHHHHH-HHhhHHHHHHhCCCcchhhhhhhHHHhhhhhhhhhhHHHhh
Q 012500 256 AYNFVIGAYS-YWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQ 306 (462)
Q Consensus 256 ~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 306 (462)
++-..++.+. .|.|..-.+..+. |.. .+.+.+.++.++|+.+..++..+
T Consensus 255 lFE~smy~FVflWtPaL~~~~~~~-P~G-lIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 255 LFEGSMYLFVFLWTPALDPDDEEL-PLG-LIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred HHHHHHHHheeeeeceecCCCCCC-Cch-HHHHHHHHHHHHHHHHHHHHHhC
Confidence 7766655544 5788765211111 212 33355667777788777655544
No 139
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.36 E-value=2.9e-12 Score=119.68 Aligned_cols=137 Identities=12% Similarity=-0.016 Sum_probs=117.4
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchh--HHHHHHHHHhhcccccc
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDF--WSIAICRMLVGVGEASF 102 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~g~~ 102 (462)
++.++.+.+. ..+.+.++..++.++.|++ ||+|||+.+..+.++..++.++..+.++. ..++...++.|++.+..
T Consensus 235 ~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 312 (377)
T TIGR00890 235 LGLSDGFLVL--AVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGT 312 (377)
T ss_pred cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccc
Confidence 5566655444 8888999999999999999 99999999999999998888887777643 33456678888888888
Q ss_pred cccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHH
Q 012500 103 ISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPF 164 (462)
Q Consensus 103 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~ 164 (462)
.+..+.++.|.+|+++|+++.++.+....+|..++|.+.+.+.++.||++.|.+.+++.++.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 313 ISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred hhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 88888899999999999999999999999999999999999999999999999988765543
No 140
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.36 E-value=8.6e-12 Score=115.96 Aligned_cols=162 Identities=8% Similarity=-0.031 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHH
Q 012500 250 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS 328 (462)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 328 (462)
.....++...........+|.|..+ .+.++... ...+...++..++.++.|+++||+||| +.+..+..+....
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r-----~~~~~~~~~~~~~ 77 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRK-----KVMIGADLIRAVL 77 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchh-----HHHHHHHHHHHHH
Confidence 3444555556666666777877776 45554444 445777888899999999999999998 7777666655554
Q ss_pred HHHHHHhh-----hhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhc
Q 012500 329 CLTAFCLS-----SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 403 (462)
Q Consensus 329 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g 403 (462)
........ +.+..++...+.+++.+...+....++.+..|+++|+++.++.+..... |..++|.+.+.+.+..|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~l~~~l~~~~g 156 (365)
T TIGR00900 78 VAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSL-FYIVGPGIGGLMYATLG 156 (365)
T ss_pred HHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHhh
Confidence 44444444 6677777777888888888888888999999999999999999766555 99999999999988766
Q ss_pred chhHHHHHHHHHHHHH
Q 012500 404 NWRKTTLALTSIFFLA 419 (462)
Q Consensus 404 ~~~~~~~~~~~~~~~~ 419 (462)
|+..++..+...++.
T Consensus 157 -~~~~~~~~~~~~~~~ 171 (365)
T TIGR00900 157 -IKWAIWVDAVGFAIS 171 (365)
T ss_pred -HHHHHHHHHHHHHHH
Confidence 777776655544433
No 141
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.35 E-value=2.4e-11 Score=114.45 Aligned_cols=174 Identities=13% Similarity=0.011 Sum_probs=122.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhh-ccccccchhHHHHH
Q 012500 244 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQM-GATISNAFKLLSAA 321 (462)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~ 321 (462)
++.++......+...+.++++..++|.|+.+..|.++... ...........++.+++|+++||+ ||| +.+..+
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrr-----r~iliG 82 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNR-----MAVMLG 82 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcH-----HHHHHH
Confidence 3445566666677778888899999999999888886555 444666677788899999999999 998 777666
Q ss_pred HHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHhccccceeeeeccCCcc--hhhHHHHHHHHHHhhhccccchhHHHHH
Q 012500 322 TFLGAISCLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS--LRALSMAISTVSIHIFGDVPSSPLVGVL 398 (462)
Q Consensus 322 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~g~l 398 (462)
..+.....++....+ +.........+...+.+...+...++..+.+|++ +|.++.++.+...+. |+.++|.+.|++
T Consensus 83 ~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nl-G~~iap~l~g~L 161 (493)
T PRK15462 83 ALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNV-GSIIAPIACGYA 161 (493)
T ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHH-HHHHHHHHHHHH
Confidence 666555544433222 1122333333344445555555667788888875 799999999878786 999999999999
Q ss_pred HhhhcchhHHHHHHHHHHHHHHHHHH
Q 012500 399 QDHVNNWRKTTLALTSIFFLAAGIWF 424 (462)
Q Consensus 399 ~~~~g~~~~~~~~~~~~~~~~~~~~~ 424 (462)
.+..| |+..|...++..+++.+.++
T Consensus 162 ~~~~G-w~~~F~iaaigm~l~li~~~ 186 (493)
T PRK15462 162 QEEYS-WAMGFGLAAVGMIAGLVIFL 186 (493)
T ss_pred HhhhC-hHHHHHHHHHHHHHHHHHHH
Confidence 98776 88888776655544444443
No 142
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.35 E-value=1.6e-11 Score=117.44 Aligned_cols=171 Identities=11% Similarity=-0.059 Sum_probs=129.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH--hCCCcchh-hhhhhHHHhhhhhhhhhhHHHhh-hccccccchhHHHH
Q 012500 245 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI--YHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKLLSA 320 (462)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~ 320 (462)
+.++.+.+..++..+.+++...++|.|+++. .|.+..+. ...+...+...++.+++|+++|| +||| +.+..
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~-----~~l~~ 84 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTK-----KTMVL 84 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchH-----HHHHH
Confidence 3455566666777888889999999999887 77876555 44577788889999999999999 8998 88877
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcc---hhhHHHHHHHHHHhhhccccchhHHHH
Q 012500 321 ATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGV 397 (462)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~g~ 397 (462)
+..+..+........++.+.......+.+++.+...+.......+.+|++ .|+++.++.+...+. |.+++|.+.++
T Consensus 85 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~ni-G~~ig~~l~g~ 163 (475)
T TIGR00924 85 GGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINI-GSFISPLLAGV 163 (475)
T ss_pred HHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHH-HHHHHHHHHHH
Confidence 77777766666555555555555666667777777777777888877764 488899998777777 99999999999
Q ss_pred HHhhhcchhHHHHHHHHHHHHHHHH
Q 012500 398 LQDHVNNWRKTTLALTSIFFLAAGI 422 (462)
Q Consensus 398 l~~~~g~~~~~~~~~~~~~~~~~~~ 422 (462)
+.++.| |+..|...++..+++.+.
T Consensus 164 l~~~~g-~~~~f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 164 IAENYG-YHVGFNLAAVGMVIGLLT 187 (475)
T ss_pred HHHhcC-hHHHHHHHHHHHHHHHHH
Confidence 998766 878887766554444333
No 143
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.34 E-value=9.1e-13 Score=125.60 Aligned_cols=146 Identities=12% Similarity=0.118 Sum_probs=117.8
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-ccc--CCchhHH--HHHHHHHHHHHhhhccchhHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSH--NPFRLIG--VGLSVWTFATAGCGSSFDFWSIAI 90 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~--Grr~~l~--~~~~~~~~~~~~~~~~~~~~~l~~ 90 (462)
+|.+.++ .+.+..+.+. ..+...++.+++.++.|++ ||. ++|+... .+.++.+++.++..++++++.+++
T Consensus 264 l~~~~~~---~g~s~~~~g~--~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i 338 (455)
T TIGR00892 264 LVPYAKD---KGVDEYEAAF--LLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVI 338 (455)
T ss_pred HHHHHHH---cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH
Confidence 4555544 4667766555 8888999999999999999 974 3343333 344444555666677889999999
Q ss_pred HHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhccc-chHHHHHHHHHHHHHHHH
Q 012500 91 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAV 166 (462)
Q Consensus 91 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-gwr~~f~~~~~~~~~~~~ 166 (462)
.+++.|++.+...+...+++.|.+|++++++.+++++...++|..+||.+++.+.+.. +|++.|++.+++.++..+
T Consensus 339 ~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 339 YCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999877 599999998887655444
No 144
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.33 E-value=8.6e-12 Score=117.72 Aligned_cols=151 Identities=13% Similarity=0.011 Sum_probs=123.3
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRML 94 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 94 (462)
.|.+.++ .+.++.+.+. ..+.+.++.+++.++.|++ ||+|||+.+..+.+...++.+...+.++.+.+.+..++
T Consensus 243 ~p~~~~~---~g~s~~~~~~--~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (406)
T PRK11551 243 LPSLLVG---QGLSRSQAGL--VQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFA 317 (406)
T ss_pred HHHHHHh---CCCChhhhhH--HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 5666654 4677766555 8888999999999999999 99999999988877777777777778888888888888
Q ss_pred hhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhccc-chHHHHHHHHHHHHHHHHHHhhc
Q 012500 95 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVI 171 (462)
Q Consensus 95 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~ 171 (462)
.|++.+...+...+++.|.+|+++|++.+++.+....+|..+||.+++.+.++. +|+..++......++..++.++.
T Consensus 318 ~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 318 AGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 998887788888899999999999999999999999999999999999998865 46666666655555544444443
No 145
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.33 E-value=1.3e-11 Score=117.80 Aligned_cols=150 Identities=19% Similarity=0.154 Sum_probs=133.4
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRML 94 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 94 (462)
+|.+.++. ++.++..+|. +.+++.+|.++++.+.+++ +|+++++.+..+.++++++.+..+++++.+..++.-++
T Consensus 241 lPl~a~~~--l~~~a~~yGl--l~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l 316 (524)
T PF05977_consen 241 LPLFARDV--LGGGASGYGL--LLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFL 316 (524)
T ss_pred hhHHHHHH--hCCcHHHHHH--HHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 67666554 5677777555 9999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHh
Q 012500 95 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 169 (462)
Q Consensus 95 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 169 (462)
.|++.....+...+.+.+..|++.|||.++++++....+..+|..+.|.+.+++|-+..+.+.++..++..++.+
T Consensus 317 ~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 317 AGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 999999888888999999999999999999999999999999999999999999999999888776555554443
No 146
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.33 E-value=8.3e-12 Score=116.57 Aligned_cols=149 Identities=11% Similarity=0.135 Sum_probs=120.7
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRML 94 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 94 (462)
.|.+..++ .+.++.+.+. ..........++.++.|++ ||+|||+++..+.++..+......+.++.+.+++.+++
T Consensus 222 ~~~~~~~~--~g~~~~~~g~--~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (375)
T TIGR00899 222 MPLLIIHE--LGLPDKLAGL--MMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLL 297 (375)
T ss_pred hHHHHHHH--cCCCHHHHHH--HHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56555443 4666666544 6666666677788999999 99999999988877776666666677888888889999
Q ss_pred hhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHh
Q 012500 95 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 169 (462)
Q Consensus 95 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 169 (462)
.|++.+...+....++.|..| +++++++++++....+|..++|.+++.+.+..||+..|++.++..++..+...
T Consensus 298 ~g~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 298 NAIFIGILAGIGMLYFQDLMP-GRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHHHHHHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 999988888888888999887 46779999999999999999999999999999999999998887766655543
No 147
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.32 E-value=1.1e-11 Score=115.82 Aligned_cols=144 Identities=13% Similarity=-0.010 Sum_probs=126.8
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRML 94 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 94 (462)
.|.++++ .+.++.+.+. ..+...++.++..++++++ ||+|+|+.+.++.++.++..+..++++|.+.+++.+++
T Consensus 228 ~~~~l~~---~g~s~~~~g~--l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l 302 (382)
T TIGR00902 228 SAIYWQA---AGISASATGL--LWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQIL 302 (382)
T ss_pred HHHHHHH---CCCCHhHHHH--HHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHH
Confidence 5656654 6788877665 7788999999999999999 99999999999999999999999999999999999999
Q ss_pred hhcccccccccccchhcccCCCCCchhHHHHHH-hhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHH
Q 012500 95 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFY-MCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAV 166 (462)
Q Consensus 95 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~ 166 (462)
+|+..+...+....++.+. |+++|++..++++ ...++|..+|+.++|.+.|++|+ ..|++.++++++..+
T Consensus 303 ~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T TIGR00902 303 HCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 9999999999999999998 9899999999986 57789999999999999999996 667777777665443
No 148
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.32 E-value=4.4e-11 Score=113.81 Aligned_cols=171 Identities=18% Similarity=0.138 Sum_probs=112.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHH
Q 012500 243 QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA 321 (462)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 321 (462)
+++.++...+.....+.....+....|.+ ++ .|.++.+. ...+...++..++.++.|+++||++|| +.+..+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~-----~~~~~~ 97 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYL-VE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPR-----VFLPAG 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHH-HH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCc-----eehHHH
Confidence 33444444444444444444455566644 44 37887665 444777888899999999999999998 656555
Q ss_pred HHHHHHHHHHHHHh----hhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHH
Q 012500 322 TFLGAISCLTAFCL----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGV 397 (462)
Q Consensus 322 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~ 397 (462)
..+.....+..... ++.+...+..++.+++.+..+++....+.+.+|+++|+++.++.+...+. |..++|.+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~-g~~~~~~l~~~ 176 (438)
T TIGR00712 98 LILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNI-GGGIPPLLVLL 176 (438)
T ss_pred HHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHh-HhHHHHHHHHH
Confidence 55444444333222 23334445555667776666666777778889999999999999766666 77888877776
Q ss_pred HHhhhcchhHHHHHHHHHHHHHHH
Q 012500 398 LQDHVNNWRKTTLALTSIFFLAAG 421 (462)
Q Consensus 398 l~~~~g~~~~~~~~~~~~~~~~~~ 421 (462)
..+...+|+..++..+.+.++..+
T Consensus 177 ~~~~~~~w~~~f~~~~~~~~i~~~ 200 (438)
T TIGR00712 177 GMAWFNDWHAALYFPAICAIIVAL 200 (438)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHH
Confidence 655445588888777666554433
No 149
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.31 E-value=4.8e-11 Score=111.98 Aligned_cols=164 Identities=13% Similarity=0.052 Sum_probs=123.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchhhh-hhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHH
Q 012500 248 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMF-GGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 326 (462)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 326 (462)
+......++.....+....++|.++++..+.++....+ .+...+...+..++.|+++||++|| +.+..+..+..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k-----~~l~~~~~~~~ 87 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAK-----PMIVTGMLMRA 87 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCch-----HHHHHHHHHHH
Confidence 34445566777777777888898998888888766533 3556677777789999999999998 88877777777
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchh
Q 012500 327 ISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR 406 (462)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 406 (462)
.........++.+..++...+.+++.+...++..+.+.+..|+++|+++.|+.+...+. |..++|.+.+++. ..| |+
T Consensus 88 ~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-g~~ig~~l~g~l~-~~g-~~ 164 (400)
T PRK11646 88 AGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSA-GAVIGALLGSWLL-QYD-FR 164 (400)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-Hhh-HH
Confidence 76666666667666666667777776666677777888889999999999999766666 9999999999998 444 77
Q ss_pred HHHHHHHHHHHHH
Q 012500 407 KTTLALTSIFFLA 419 (462)
Q Consensus 407 ~~~~~~~~~~~~~ 419 (462)
..+++.+...++.
T Consensus 165 ~~f~~~~~~~~~~ 177 (400)
T PRK11646 165 LVCATGAVLFVLA 177 (400)
T ss_pred HHHHHHHHHHHHH
Confidence 7777665554443
No 150
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.31 E-value=1.4e-11 Score=113.93 Aligned_cols=162 Identities=16% Similarity=0.135 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHH
Q 012500 253 GYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT 331 (462)
Q Consensus 253 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (462)
..++............|.++.+.+|.++.+. ...+...++..++.++.|+++||+||| +.+..+..+.....+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~l~~~~~~~~~~~~~ 78 (352)
T PF07690_consen 4 AFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRR-----RVLIIGLLLFALGSLL 78 (352)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HH-----HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCe-----eeEeehhhhhhhHHHH
Confidence 3455555555666667756667778776665 445778888999999999999999998 7777776666666344
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHH
Q 012500 332 AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLA 411 (462)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~ 411 (462)
..+.++.+..++..++.+++.+...+....++.+..|+++|+++.++.+...+. |..++|.+.+.+.+..+ |+..+++
T Consensus 79 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~l~~~l~~~~~-~~~~~~~ 156 (352)
T PF07690_consen 79 LAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSL-GSILGPLLGGFLISYFG-WRWAFLI 156 (352)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHH-HHHHHHHHHHHCCCHCH-HCCHHHH
T ss_pred hhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhh-hhhcccchhhhhhhccc-ccccccc
Confidence 433366667777888888888888888999999999999999999999766665 99999999999987655 7777777
Q ss_pred HHHHHHHHHH
Q 012500 412 LTSIFFLAAG 421 (462)
Q Consensus 412 ~~~~~~~~~~ 421 (462)
.+...++..+
T Consensus 157 ~~~~~~~~~i 166 (352)
T PF07690_consen 157 SAILSLIAAI 166 (352)
T ss_dssp HHHHHHHHHH
T ss_pred ccchhhhhhh
Confidence 7776665554
No 151
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.30 E-value=2.1e-11 Score=114.66 Aligned_cols=152 Identities=17% Similarity=0.152 Sum_probs=115.7
Q ss_pred HHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHH
Q 012500 262 GAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYG 340 (462)
Q Consensus 262 ~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (462)
..+....|. +.+.++.++... ...+...++..++.++.|++.||+||| +.+..+..+...........++.+.
T Consensus 11 ~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
T TIGR00893 11 ANLSFAAPM-LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGAR-----KTLAVFIVIWGVFTGLQAFAGAYVS 84 (399)
T ss_pred HhhhHhHHH-HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcc-----eeeHHHHHHHHHHHHHHHHHcCHHH
Confidence 334444554 556678876555 455778888999999999999999998 6666666666666555556667777
Q ss_pred HHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHHHHHH
Q 012500 341 FLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 420 (462)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 420 (462)
.++..++.+++.+...+....++.+..|+++|+++.++.+...+. |..++|.+.+.+.+..+ |+..+...+...++..
T Consensus 85 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~ 162 (399)
T TIGR00893 85 LYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGL-GGIIGGPLVGWILIHFS-WQWAFIIEGVLGIIWG 162 (399)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchH-HHHHHHHHHHHHHHhCC-chHHHHHHHHHHHHHH
Confidence 888888888888888888888999999999999999999655555 99999999999888766 7777776665544433
Q ss_pred H
Q 012500 421 G 421 (462)
Q Consensus 421 ~ 421 (462)
+
T Consensus 163 ~ 163 (399)
T TIGR00893 163 V 163 (399)
T ss_pred H
Confidence 3
No 152
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.30 E-value=2e-11 Score=113.97 Aligned_cols=146 Identities=8% Similarity=0.067 Sum_probs=117.8
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRML 94 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 94 (462)
+|.+.++ .+.++.+.+. ..+.+.++.++++++.|++ ||+|+|+++..+..+..++.+... +........++
T Consensus 223 lp~~~~~---~g~s~~~~g~--~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~l 294 (381)
T PRK03633 223 MPLYLNH---QGMSDASIGF--WMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML---SQAAMAPALFI 294 (381)
T ss_pred HHHHHHH---cCCCHHHHHH--HHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHH
Confidence 6766654 3666666544 7888889999999999999 999999999888888877665443 22344557788
Q ss_pred hhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHh
Q 012500 95 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 169 (462)
Q Consensus 95 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 169 (462)
.|++.+...|...+.+.|..|+++++.+.+.+....++|..+||.++|++.+++||++.|.+.+.+.++..+..+
T Consensus 295 ~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 295 LGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 888877788989999999999888888888888899999999999999999999999999998887765544333
No 153
>PRK03545 putative arabinose transporter; Provisional
Probab=99.30 E-value=3.1e-11 Score=113.20 Aligned_cols=151 Identities=15% Similarity=0.122 Sum_probs=118.3
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHH-HhhhccchhHHHHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFAT-AGCGSSFDFWSIAICRM 93 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~r~ 93 (462)
+|.+..++ .+.++.+.+. ..+.+.++.+++.++.|++ ||+|||++.. +..+..++. .+....++.+.+++..+
T Consensus 228 ~~~~l~~~--~g~s~~~~~~--~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~ 302 (390)
T PRK03545 228 IEPFVQQV--AGLSENFATL--LLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSI 302 (390)
T ss_pred HHHHHHHh--cCCCccHHHH--HHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHH
Confidence 34454443 4566666444 7888889999999999999 9999887544 444444443 34456678888888999
Q ss_pred HhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhcc
Q 012500 94 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 172 (462)
Q Consensus 94 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 172 (462)
+.|++.+...+.....+.+..| ++|++++++++....+|..+||.++|.+.+++|+|..|++.+.+.++..+..+...
T Consensus 303 l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 303 FWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 9999887777777778888876 68999999999999999999999999999999999999999988877666665554
No 154
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.30 E-value=1.4e-11 Score=118.29 Aligned_cols=153 Identities=12% Similarity=-0.045 Sum_probs=113.5
Q ss_pred HhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHH--hhhccchhHHHHHH
Q 012500 15 ILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATA--GCGSSFDFWSIAIC 91 (462)
Q Consensus 15 ~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~--~~~~~~~~~~l~~~ 91 (462)
..|.+++++ ++.+..+.+. ..+.+.++..++.++.|++ ||+|||+.+.....+..++.. .....++.+.+.+.
T Consensus 280 ~~p~yl~~~--~g~s~~~a~~--~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (467)
T PRK09556 280 WSPVYAFQE--LGFSKEDAIN--TFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLAS 355 (467)
T ss_pred HHHHHHHHc--cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 378777665 5666666544 7788889999999999999 999999987665544443332 22344567677788
Q ss_pred HHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhh-hhhhhhhHHHHhhc------------ccchHHHHHHHH
Q 012500 92 RMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPT-GVALGYVYGGVVGS------------HLNWRYAFWGEA 158 (462)
Q Consensus 92 r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~~~~~l~~------------~~gwr~~f~~~~ 158 (462)
+++.|++.............|.+|+++||++.|+.+...++ |..++|.+.|.+.+ ..||+..|++.+
T Consensus 356 ~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~ 435 (467)
T PRK09556 356 LFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALD 435 (467)
T ss_pred HHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHH
Confidence 88888654333333345667999999999999999988886 77999999999998 578999999887
Q ss_pred HHHHHHHHHHhhc
Q 012500 159 ILMLPFAVLAFVI 171 (462)
Q Consensus 159 ~~~~~~~~~~~~~ 171 (462)
+..++..+..++.
T Consensus 436 ~~~~~~~~~~~~~ 448 (467)
T PRK09556 436 IAAIGCICLMAIV 448 (467)
T ss_pred HHHHHHHHHHHHH
Confidence 7766655544433
No 155
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.30 E-value=3.8e-10 Score=101.99 Aligned_cols=322 Identities=15% Similarity=0.060 Sum_probs=183.9
Q ss_pred chhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccccccchhccc
Q 012500 35 SSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDN 113 (462)
Q Consensus 35 ~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~ 113 (462)
.+.+..+-.+..++.-+.+.++ +|+..+.=.....+++.++.++.++++|.+.=+++-.+.+++.|........+.. .
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~ 139 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-F 139 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-h
Confidence 3446777777888888888888 9988777777788899999999999999999899999999999988877777654 5
Q ss_pred CCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccch--HHHHHHHHHHHHHHHHHHhhccccccCCCCCcccccccccc
Q 012500 114 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW--RYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVA 191 (462)
Q Consensus 114 ~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gw--r~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 191 (462)
+++ ...+-+..+.+.+.++|+..-..+.+ .|+ |..+++...+.++..+..++.+|..+......+.+... +
T Consensus 140 y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~--~ 212 (402)
T PF02487_consen 140 YGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESED--E 212 (402)
T ss_pred cCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCC--c
Confidence 553 35788888888888888877666655 554 77888887776666666666665432211111110000 0
Q ss_pred ccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHH
Q 012500 192 SVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKA 271 (462)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 271 (462)
.+++ ...++..+.+.+...+ ...++.++..|.++. .+..+.+.+++-+....++. |..
T Consensus 213 ---------~~~~----~~~~~~~~~~~~~~~~----~~~~~k~~~~k~Ll~--ymiPL~lVY~aEY~InqGv~---~tl 270 (402)
T PF02487_consen 213 ---------AEDD----LLESETSESKPDSSSK----LSFKEKLKRLKPLLW--YMIPLFLVYFAEYFINQGVA---PTL 270 (402)
T ss_pred ---------cccc----ccccccccccccccch----hhHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhchH---HHh
Confidence 0000 0000000000000000 111111222333222 33334444444444433333 222
Q ss_pred HHHHhCCCc-chh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHH---HHhhhhHHHHHHHH
Q 012500 272 GYNIYHMSN-ADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA---FCLSSLYGFLALFT 346 (462)
Q Consensus 272 ~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 346 (462)
.......++ ..+ .+...+.++-++++--...+ |+.+. +++.....+-.+.+++- .+.++.|..++.++
T Consensus 271 ~fp~~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--rir~l-----wils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif 343 (402)
T PF02487_consen 271 LFPNSFFSPRDQYRWYQLLYQLGVFISRSSLPFF--RIRRL-----WILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIF 343 (402)
T ss_pred cCCccCCCHHHHHHHHHHHHHHHHhhhhcceeee--ehhhH-----HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 211112222 223 44466666666665432221 22111 22222222222222221 22356777777778
Q ss_pred HHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhH
Q 012500 347 VGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPL 394 (462)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 394 (462)
..|...|..+...+..+.++.++++|..++|... ....+|..++..+
T Consensus 344 ~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vs-vsds~GI~lAgll 390 (402)
T PF02487_consen 344 YEGLLGGASYVNTFYRISEEVPPEDREFSLGAVS-VSDSLGILLAGLL 390 (402)
T ss_pred HHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHH-HHhhHHHHHHHHH
Confidence 8888888899988999999999999999999994 4444466666533
No 156
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.29 E-value=9.3e-11 Score=110.71 Aligned_cols=159 Identities=11% Similarity=0.085 Sum_probs=118.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHH
Q 012500 248 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 326 (462)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 326 (462)
....+..+.............|.+ .+.++.++.+. ...+...++..++.++.|++.||+||| +.+..+..+..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r-----~~~~~~~~~~~ 88 (405)
T TIGR00891 15 SAAWLGWLLDAFDFFLVALVLAEV-AGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRR-----LPMVTSIVLFS 88 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHH
Confidence 344444555555555555666654 55678886665 445778888999999999999999999 77777766666
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhc-ch
Q 012500 327 ISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN-NW 405 (462)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g-~~ 405 (462)
+..+.....++.+..+...++.+++.+...+....++.+..|+++|+++.++.+..... |.++++.+.+.+.+..+ +|
T Consensus 89 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~l~~~l~~~~~~~w 167 (405)
T TIGR00891 89 AGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAV-GAVVAAQVYSLVVPVWGDGW 167 (405)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCccH
Confidence 66666666677777777778888888888888888888999999999999999655555 99999999888887654 46
Q ss_pred hHHHHHHH
Q 012500 406 RKTTLALT 413 (462)
Q Consensus 406 ~~~~~~~~ 413 (462)
+..+...+
T Consensus 168 ~~~f~~~~ 175 (405)
T TIGR00891 168 RALFFISI 175 (405)
T ss_pred HHHHHHHH
Confidence 66665543
No 157
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.28 E-value=3.8e-11 Score=109.39 Aligned_cols=189 Identities=10% Similarity=0.013 Sum_probs=143.8
Q ss_pred cchhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchhhhhhhHHHhhhhhhhhhhHHHhhhccccc
Q 012500 233 QFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATIS 312 (462)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 312 (462)
..+.+..+++.++....+++...+.+.....+.+++=-++++..+.+............+-++.-++.+++.+|+|+-
T Consensus 359 ~v~a~~~~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv-- 436 (618)
T KOG3762|consen 359 SVLADVGKVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHV-- 436 (618)
T ss_pred HHHHHHHHHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhccc--
Confidence 445555567788777776666666667666677777666777654443222333455666688888999999999998
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccch
Q 012500 313 NAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 392 (462)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 392 (462)
+++..++....+=.+......++|..+..-++-+...+..+..+.+++....||+.++++.++.......+|--+|+
T Consensus 437 ---~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~Gs 513 (618)
T KOG3762|consen 437 ---NVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGS 513 (618)
T ss_pred ---ceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhh
Confidence 77777777777778888888999999999999999999999999999999999999999999998888777999999
Q ss_pred hHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHH
Q 012500 393 PLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGI 427 (462)
Q Consensus 393 ~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 427 (462)
+++|.+.+++|. ...|..+++.+++..+......
T Consensus 514 lIGG~~v~~fg~-~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 514 LIGGFVVERFGA-RTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred hhhhhhheeehh-HHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999874 4556655555444444444333
No 158
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.28 E-value=2e-11 Score=114.11 Aligned_cols=156 Identities=16% Similarity=0.130 Sum_probs=115.1
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHH
Q 012500 255 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 333 (462)
Q Consensus 255 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (462)
++.+.....+....|. +.+.++.++.+. ...+...++..++.++.|+++||+||| +.+..+..+..+..++..
T Consensus 5 ~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~~~~~ 78 (379)
T TIGR00881 5 AAYYLVRKNFALAMPY-LVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPR-----VFLPIGLILCAIVNLFFG 78 (379)
T ss_pred hHHHHhHHhhhhhhHH-HHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCe-----ehhHHHHHHHHHHHHHHH
Confidence 3444455555666664 455678886655 455778888899999999999999999 777777777766666666
Q ss_pred HhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchh-HHHHHHhhhcchhHHHHHH
Q 012500 334 CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSP-LVGVLQDHVNNWRKTTLAL 412 (462)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~g~l~~~~g~~~~~~~~~ 412 (462)
..++.+..++...+.+++.+...+....++.+..|+++|+++.++.+..... |..++|. +.+.+.+.. +|+..++..
T Consensus 79 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~-~~~~~~~~~ 156 (379)
T TIGR00881 79 FSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNV-GGGLLPPLVLFGIAELY-SWHWVFIVP 156 (379)
T ss_pred HhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchh-HHHHHHHHHHHHHHhcC-CchhHHHHH
Confidence 6677777777778888888888888888999999999999999998655555 8888884 555555543 476766665
Q ss_pred HHHHHH
Q 012500 413 TSIFFL 418 (462)
Q Consensus 413 ~~~~~~ 418 (462)
+.+.++
T Consensus 157 ~~~~~~ 162 (379)
T TIGR00881 157 GIIAII 162 (379)
T ss_pred HHHHHH
Confidence 554443
No 159
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.28 E-value=1.5e-10 Score=111.31 Aligned_cols=176 Identities=11% Similarity=-0.043 Sum_probs=121.2
Q ss_pred Hhhhh-HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhh-hccccccchhH
Q 012500 241 LLQEK-VYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKL 317 (462)
Q Consensus 241 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~ 317 (462)
.+++| .++......++..+.++++..++|.|+++.+|.+.... ..............+++|+++|| +||| +.
T Consensus 16 ~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r-----~~ 90 (500)
T PRK09584 16 AFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTK-----RV 90 (500)
T ss_pred hhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH-----HH
Confidence 44555 47777777788888888999999999999999986554 32233333334445689999999 5998 77
Q ss_pred HHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHhccccceeeeeccCCcc--hhhHHHHHHHHHHhhhccccchhH
Q 012500 318 LSAATFLGAISCLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS--LRALSMAISTVSIHIFGDVPSSPL 394 (462)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~ 394 (462)
+..+..+..+...+....+ +.+...+...+.+++.+...+.......+.+|++ .+..+.++.+...+. |..++|.+
T Consensus 91 ~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~i-G~~~gp~i 169 (500)
T PRK09584 91 IMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINI-GSFFSMLA 169 (500)
T ss_pred HHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHH-HHHHHHHH
Confidence 7766666665544444432 3333444455566676666676677888888764 345677877667776 99999999
Q ss_pred HHHHHhhhcchhHHHHHHHHHHHHHHHHH
Q 012500 395 VGVLQDHVNNWRKTTLALTSIFFLAAGIW 423 (462)
Q Consensus 395 ~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 423 (462)
.|++.|..| |+..|...++..+++.+.+
T Consensus 170 ~g~l~~~~g-~~~~F~i~~i~~~i~~i~~ 197 (500)
T PRK09584 170 TPWLAAKYG-WSVAFALSVVGMLITVVNF 197 (500)
T ss_pred HHHHHHhhC-HHHHHHHHHHHHHHHHHHH
Confidence 999999876 8888887665544444333
No 160
>PRK03699 putative transporter; Provisional
Probab=99.27 E-value=2.2e-10 Score=107.54 Aligned_cols=166 Identities=8% Similarity=0.026 Sum_probs=119.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHH
Q 012500 247 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG 325 (462)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 325 (462)
.+...+..++...........+|.+.+ .++.++.+. ...+...++..++.++.|++.||+||| +.+..+..+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~g~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r-----~~~~~~~~~~ 82 (394)
T PRK03699 9 TWISFLSYALTGALVIVTGMVMGPIAE-YFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLK-----RQLIFGFALM 82 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH-----HHHHHHHHHH
Confidence 344444445555555556666777654 578886555 445677888899999999999999999 7777666666
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcch
Q 012500 326 AISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNW 405 (462)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~ 405 (462)
.+...+....++.+..++...+.+++.+...+.....+.+..|+++|+.+.+..+..... ++.++|.+.+.+.+...+|
T Consensus 83 ~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~gw 161 (394)
T PRK03699 83 ILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSM-AGMIFPIIAAYLLARSIEW 161 (394)
T ss_pred HHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccccH
Confidence 666555555667777777777788888777777778888888888999999888655555 7788898888887654468
Q ss_pred hHHHHHHHHHHHHH
Q 012500 406 RKTTLALTSIFFLA 419 (462)
Q Consensus 406 ~~~~~~~~~~~~~~ 419 (462)
+..+...+...+..
T Consensus 162 ~~~f~~~~~~~~~~ 175 (394)
T PRK03699 162 YWVYACIGLVYVAI 175 (394)
T ss_pred HHHHHHHHHHHHHH
Confidence 88877666554443
No 161
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.27 E-value=1.2e-10 Score=111.46 Aligned_cols=172 Identities=12% Similarity=-0.003 Sum_probs=125.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhh-hccccccchhHHHHHH
Q 012500 245 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKLLSAAT 322 (462)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~ 322 (462)
+.++..+...+...+.+++...+++.|+++..|.+.... .....+.....+..+++|+++|| +||| +.+..+.
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r-----~~~~~g~ 88 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTK-----RTIVLGA 88 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchH-----HHHHHHH
Confidence 455666666777888889999999999999888886555 33344555555667789999999 9999 8888777
Q ss_pred HHHHHHHHHHHHhhhhH-HHHHHHHHHHHHHHhccccceeeeeccCCcc--hhhHHHHHHHHHHhhhccccchhHHHHHH
Q 012500 323 FLGAISCLTAFCLSSLY-GFLALFTVGELLVFATQAPVNYVCLHSVKPS--LRALSMAISTVSIHIFGDVPSSPLVGVLQ 399 (462)
Q Consensus 323 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~g~l~ 399 (462)
.+..+..+......+.. ..++...+.+.+.+...+....++.+.+|++ +|+.+.++.+...+. |.+++|.+.|++.
T Consensus 89 ~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~ni-g~~~g~~l~g~l~ 167 (489)
T PRK10207 89 IVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINI-GSLISLSLAPVIA 167 (489)
T ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHH-HHHHHHHHHHHHH
Confidence 77776665555444322 2334556667777777788888999999886 457788888777787 9999999999999
Q ss_pred hhhcchhHHHHHHHHHHHHHHHHH
Q 012500 400 DHVNNWRKTTLALTSIFFLAAGIW 423 (462)
Q Consensus 400 ~~~g~~~~~~~~~~~~~~~~~~~~ 423 (462)
++.| |+..|++..+..+.+.+.+
T Consensus 168 ~~~g-w~~~F~i~~i~~~~~~~~~ 190 (489)
T PRK10207 168 DKFG-YSVTYNLCGAGLIIALLVY 190 (489)
T ss_pred HhhC-hHHHHHHHHHHHHHHHHHH
Confidence 9876 8888877554444333333
No 162
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.27 E-value=9.3e-11 Score=110.48 Aligned_cols=162 Identities=10% Similarity=0.035 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHH
Q 012500 250 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS 328 (462)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 328 (462)
..+.+.+.+..........| .++++++.+..+. ...+...++..++.+..|++.||+||| +.+..+.++..+.
T Consensus 13 ~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r-----~~~~~~~~~~~~~ 86 (412)
T TIGR02332 13 LFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGAR-----RWIAGIMVLWGIA 86 (412)
T ss_pred HHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChH-----HHHHHHHHHHHHH
Confidence 33333443444444445555 6677788887666 445778888899999999999999999 7777777777766
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhh-----hc
Q 012500 329 CLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH-----VN 403 (462)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~-----~g 403 (462)
.......++.+..++.-++.|++.+...+....++.+.+|+++|+++.++.+..... |..+++.+.+++.+. ..
T Consensus 87 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~~~~~~ 165 (412)
T TIGR02332 87 STATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPV-TMALGLILSGYILALDGLMALK 165 (412)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCCCCCcc
Confidence 666666677777777778888888877777777778888999999999999766665 889999999988753 12
Q ss_pred chhHHHHHHHHHHHH
Q 012500 404 NWRKTTLALTSIFFL 418 (462)
Q Consensus 404 ~~~~~~~~~~~~~~~ 418 (462)
+|+..+++.+...++
T Consensus 166 gwr~~f~~~~~~~l~ 180 (412)
T TIGR02332 166 GWQWLFLLEGFPSVI 180 (412)
T ss_pred chhHHHHHHHHHHHH
Confidence 588888776555443
No 163
>PRK10504 putative transporter; Provisional
Probab=99.27 E-value=1.3e-10 Score=111.84 Aligned_cols=168 Identities=14% Similarity=0.108 Sum_probs=126.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHH
Q 012500 245 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 323 (462)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 323 (462)
+.++...+..++.......+..+.|.+.++ +|.++... ...+...++..++.++.|+++||+||| +.+..+..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r-----~~~~~~~~ 83 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVR-----NIFFTAIV 83 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchH-----HHHHHHHH
Confidence 456666676777777777788889988876 77886554 344666777788999999999999998 77666655
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhc
Q 012500 324 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 403 (462)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g 403 (462)
+.....+.....++.+..++..++.+++.+...+.....+.+.+|+++|+++.++.+...+. |..++|.+.|.+.+..|
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~~~g~l~~~~g 162 (471)
T PRK10504 84 LFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQV-GPLLGPALGGLLVEYAS 162 (471)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHhhhHHHHHHHhhcc
Confidence 55555444445566667777777888888877777777888889999999999999765565 88999999999999765
Q ss_pred chhHHHHHHHHHHHHHH
Q 012500 404 NWRKTTLALTSIFFLAA 420 (462)
Q Consensus 404 ~~~~~~~~~~~~~~~~~ 420 (462)
|+..|.+......+..
T Consensus 163 -w~~~f~~~~~~~~l~~ 178 (471)
T PRK10504 163 -WHWIFLINIPVGIIGA 178 (471)
T ss_pred -HHHHHHHHHHHHHHHH
Confidence 8777776655544433
No 164
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.26 E-value=2.2e-10 Score=103.08 Aligned_cols=176 Identities=16% Similarity=0.084 Sum_probs=147.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHH
Q 012500 245 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 323 (462)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 323 (462)
...+.+.++.++.....+.....+|..-++ ++.+.... ...+.+..+..++.++...+.||+.|| +.+.....
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~d-l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr-----~lLl~~l~ 86 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIAAD-LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERR-----RLLLGLLA 86 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchH-----HHHHHHHH
Confidence 344566666777777787888888887766 77886655 555889999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhc
Q 012500 324 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 403 (462)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g 403 (462)
+.....++....++.+..++.=.+.++..+..++.......+.+||++|+++.++....... +.++|.+++.++-|.+|
T Consensus 87 lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tl-A~v~GvPLGt~ig~~~G 165 (394)
T COG2814 87 LFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTL-ATVLGVPLGTFLGQLFG 165 (394)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHH-HHHHhccHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999655555 99999999999999988
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhc
Q 012500 404 NWRKTTLALTSIFFLAAGIWFVGIFLK 430 (462)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (462)
|+..|...+.+.+...+.. +..+|
T Consensus 166 -WR~~F~~ia~l~ll~~~~~--~~~lP 189 (394)
T COG2814 166 -WRATFLAIAVLALLALLLL--WKLLP 189 (394)
T ss_pred -HHHHHHHHHHHHHHHHHHH--HHhCC
Confidence 9999888887765554443 34556
No 165
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.25 E-value=7.2e-11 Score=110.60 Aligned_cols=154 Identities=12% Similarity=0.079 Sum_probs=120.3
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhc-cchhHHHHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGS-SFDFWSIAICRM 93 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~l~~~r~ 93 (462)
+|.+..+ .+.+..+.+. ..+.+.++.+++.+..|++ ||+|||+.+..+..+..++.++... .++...+. -+
T Consensus 228 lp~~l~~---~g~s~~~ag~--~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~ 300 (393)
T PRK09705 228 LPAFYIE---IGASAQYSGS--LLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW--AM 300 (393)
T ss_pred HHHHHHH---cCCChhhhhH--HHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH--HH
Confidence 6666654 4677777555 8899999999999999999 9999999999888887777665543 33322222 24
Q ss_pred HhhcccccccccccchhcccCC-CCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccc-hHHHHHHHHHHHHHHHHHHhhc
Q 012500 94 LVGVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFVI 171 (462)
Q Consensus 94 l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~ 171 (462)
+.|++.+...+.......+..+ +++|++..++.+....++..++|.+.+++.++.| |+..|++.++.+++..+..+.+
T Consensus 301 l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK09705 301 VCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRF 380 (393)
T ss_pred HHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHh
Confidence 5688888777777767677775 5789999999999999999999999999999876 8888888888777777766777
Q ss_pred ccccc
Q 012500 172 KPLQL 176 (462)
Q Consensus 172 ~p~~~ 176 (462)
.||++
T Consensus 381 ~~~~~ 385 (393)
T PRK09705 381 APARF 385 (393)
T ss_pred ccccc
Confidence 67654
No 166
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.24 E-value=2.6e-11 Score=117.23 Aligned_cols=155 Identities=6% Similarity=-0.086 Sum_probs=117.1
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhc-----cc------
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGS-----SF------ 83 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~-----~~------ 83 (462)
.|.+.++ .+.+..+. ++......++..++.++.+++ ||+|||+.+..+.++.+++.++.++ .+
T Consensus 307 ~~~~~~~---~g~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (481)
T TIGR00879 307 SPTIFEN---AGVSTDHA--FLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSS 381 (481)
T ss_pred HHHHHHH---cCCCchHH--HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccch
Confidence 4544433 45555443 337788888889999999999 9999999999998888887776652 11
Q ss_pred hhHHHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHH
Q 012500 84 DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLP 163 (462)
Q Consensus 84 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~ 163 (462)
+...+....+..+.......+....++.|.+|+++|++++++.+...++|.+++|.+.+.+.++.+|++.|++.++++++
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~ 461 (481)
T TIGR00879 382 GNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVL 461 (481)
T ss_pred hHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHH
Confidence 23333333333333223344666777899999999999999999999999999999999999989999999999988888
Q ss_pred HHHHHhhccccc
Q 012500 164 FAVLAFVIKPLQ 175 (462)
Q Consensus 164 ~~~~~~~~~p~~ 175 (462)
..+..+++.||+
T Consensus 462 ~~i~~~~~~~~~ 473 (481)
T TIGR00879 462 GLIFVYFFLPET 473 (481)
T ss_pred HHHHHheecccC
Confidence 877777776664
No 167
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.24 E-value=2.3e-10 Score=106.40 Aligned_cols=148 Identities=17% Similarity=0.086 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHH
Q 012500 246 VYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL 324 (462)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 324 (462)
.++...+..+...........+.|.++++.+|.++... ...+...++..++.++.|+++||+||| +.+..+..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~ 76 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPR-----YTTTLSLLL 76 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHH
Confidence 34555666666666777778888877888899997666 445778888999999999999999998 777777777
Q ss_pred HHHHHHHHHHhh-hhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHh
Q 012500 325 GAISCLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 400 (462)
Q Consensus 325 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~ 400 (462)
..+..+.....+ +.+..++..++.+++.+ ...+....+.+..|+++|+++.++.....+. |..+++.+.+.+.+
T Consensus 77 ~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 77 LAIPCLWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNM-GGGVAQFVMPPIIG 151 (366)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHH-HHHHHHHHHHHHHH
Confidence 666666666566 66666666666666543 3455667788888889999999998544444 77777777666654
No 168
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.24 E-value=1.3e-10 Score=108.96 Aligned_cols=155 Identities=15% Similarity=0.049 Sum_probs=115.6
Q ss_pred HHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhh
Q 012500 259 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS 337 (462)
Q Consensus 259 ~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (462)
..........|.+ .+.+|.++.+. ...+...++..++.++.|++.||+||| +.+..+..+...........++
T Consensus 19 ~~~~~~~~~~p~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r-----~~~~~~~~~~~~~~~~~~~~~~ 92 (385)
T TIGR00710 19 LGIDMYLPAFPEI-AADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRR-----PVLLLGLFIFALSSLGLALSNN 92 (385)
T ss_pred HHHHHhcccHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh-----HHHHHHHHHHHHHHHHHHHHcc
Confidence 3334444445554 44577776555 445777888899999999999999998 7777777776666666666677
Q ss_pred hHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHHH
Q 012500 338 LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFF 417 (462)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 417 (462)
.+...+..++.+++.+...+....++.+..|+++|+++.++.+..... |..++|.+.+.+.+..+ |+..++..+...+
T Consensus 93 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~~-~~~~~~~~~~~~~ 170 (385)
T TIGR00710 93 IETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLAL-APAVAPLLGGYILVWLS-WHAIFAFLSLAGI 170 (385)
T ss_pred HHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC-HHHHHHHHHHHHH
Confidence 777777777788887777778888889999999999999999766555 88899999999988765 7777766655544
Q ss_pred HHHH
Q 012500 418 LAAG 421 (462)
Q Consensus 418 ~~~~ 421 (462)
...+
T Consensus 171 ~~~~ 174 (385)
T TIGR00710 171 LLSA 174 (385)
T ss_pred HHHH
Confidence 4333
No 169
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.23 E-value=3.6e-10 Score=105.87 Aligned_cols=144 Identities=15% Similarity=0.054 Sum_probs=112.8
Q ss_pred HHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 012500 265 SYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLA 343 (462)
Q Consensus 265 ~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (462)
...+|.+.+ .+|.++.+. ...+...++..++.++.|++.||+||| +.+..+..+.....+.....++.+..++
T Consensus 40 ~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 113 (394)
T PRK10213 40 VSLLTPMAQ-DLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRR-----YVVILFAVLLTLSCLLVSFANSFSLLLI 113 (394)
T ss_pred HhhHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcH-----HHHHHHHHHHHHHHHHHHHHChHHHHHH
Confidence 334565544 577776655 444677888888999999999999999 8887777777766666666677888888
Q ss_pred HHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHH
Q 012500 344 LFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF 416 (462)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 416 (462)
.-.+.+++.+...+.....+.+.+|+++|+++.++.....+. |..++|.+.+.+.+..| |+..+++.+.+.
T Consensus 114 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-g~~ig~~l~~~l~~~~g-w~~~f~~~~~l~ 184 (394)
T PRK10213 114 GRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSI-ALVIAAPLGSFLGELIG-WRNVFNAAAVMG 184 (394)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcC-HHHHHHHHHHHH
Confidence 878888888887788888888999999999999999665565 99999999999998876 877777665443
No 170
>TIGR00895 2A0115 benzoate transport.
Probab=99.22 E-value=5e-11 Score=112.21 Aligned_cols=150 Identities=14% Similarity=0.162 Sum_probs=111.2
Q ss_pred HHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhh
Q 012500 258 NFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS 336 (462)
Q Consensus 258 ~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (462)
...........|.+.+ .+|.++... ...+...++..++.++.|+++||++|| +.+..+..+...........+
T Consensus 30 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~~~~~~~~~~~~~~~~ 103 (398)
T TIGR00895 30 GYDLAAMGFAAPAISA-EWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRK-----RVLLWSILLFSVFTLLCALAT 103 (398)
T ss_pred HHHHHHHHhhHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHHcc
Confidence 3334444555665544 477776555 444667788899999999999999998 777776666666665555566
Q ss_pred hhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHH
Q 012500 337 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 415 (462)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 415 (462)
+.+..++...+.+++.+...+....++.+..|+++|+++.++.+..... |..++|.+.+++.+..| |+..+.+.+..
T Consensus 104 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~g-~~~~~~~~~~~ 180 (398)
T TIGR00895 104 NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPI-GAAVGGFLAGWLIPVFG-WRSLFYVGGIA 180 (398)
T ss_pred chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHH-HHHHHHHHHHHHhhccc-ceeehhhhhhH
Confidence 7777777777778877777888888889999989999999999655555 88999999999988765 66666665433
No 171
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.22 E-value=8.7e-09 Score=94.93 Aligned_cols=308 Identities=11% Similarity=0.017 Sum_probs=178.3
Q ss_pred HHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccccccchhcccCCCC
Q 012500 39 VLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVP 117 (462)
Q Consensus 39 ~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~ 117 (462)
.+.......+++++++.+ |+.|.|+.+.++...+..-.+..-+- |-+-++++-.+.|+|.+..+..--.+++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~-N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP-NSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc-chHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 344445555666677777 77799999999999998877766554 5677888999999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhhhhHHHHhhcc--------cchH-HHH----------HHHHHHHHHHHH--HHhhcccccc
Q 012500 118 QKTAWLSMFYMCIPTGVALGYVYGGVVGSH--------LNWR-YAF----------WGEAILMLPFAV--LAFVIKPLQL 176 (462)
Q Consensus 118 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~--------~gwr-~~f----------~~~~~~~~~~~~--~~~~~~p~~~ 176 (462)
++.+..++.......+.++|..+-..+..+ .+-+ ..+ .+.+++..+..+ ......|.+.
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~~ 214 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSKD 214 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCccc
Confidence 999999999999988888887665443321 1111 111 111111101000 0011111100
Q ss_pred CCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHH
Q 012500 177 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA 256 (462)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (462)
. ...++. . + ...++..+..-++++++++..+....+.
T Consensus 215 ~-----~~~~~~--------------------~-~-----------------~~~~~~l~~~~~l~~~~~ml~L~~~f~~ 251 (461)
T KOG3098|consen 215 V-----VNCKSS--------------------S-E-----------------TSFSELLKLTFKLLKTPKMLLLFPFFFY 251 (461)
T ss_pred h-----hhhhhh--------------------c-c-----------------ccHHHHHHHHHHHhcCHhHHHHHHHHHH
Confidence 0 000000 0 0 0111112334456677777777665555
Q ss_pred HHHHHHHHHHHhhHHHHHH--hCCCcchh--hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHH
Q 012500 257 YNFVIGAYSYWGPKAGYNI--YHMSNADM--MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA 332 (462)
Q Consensus 257 ~~~~~~~~~~~~p~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (462)
.++.........|.-+.-. .+.+.... ......+++.+++....+.+.+|..+...+ +.+.....+....+.+.
T Consensus 252 tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~--~~~~~~~~~~~~~~~li 329 (461)
T KOG3098|consen 252 TGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRK--PTVLIGIIIHLIGFLLI 329 (461)
T ss_pred HHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccC--cchhHHHHHHHHHHHHH
Confidence 5555544555555533332 22232222 223445666677777777777776543222 44444443333333332
Q ss_pred HHh------------------hhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhH
Q 012500 333 FCL------------------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPL 394 (462)
Q Consensus 333 ~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 394 (462)
... ++.....+...+.|++........++.+...+ |+.|..+.++.- ....+++.++-..
T Consensus 330 ~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~k-fyq~~~s~v~~f~ 407 (461)
T KOG3098|consen 330 HLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFK-FYQSVASCVAFFF 407 (461)
T ss_pred hccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHH-HHHHHHHHHHhhh
Confidence 211 12345666777788888888888888888888 777888888884 3333355544433
No 172
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.20 E-value=1.8e-10 Score=108.41 Aligned_cols=150 Identities=16% Similarity=0.038 Sum_probs=113.7
Q ss_pred HhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHH-HHHHHHHHHHHhhh-----ccchhHH
Q 012500 15 ILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIG-VGLSVWTFATAGCG-----SSFDFWS 87 (462)
Q Consensus 15 ~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~-~~~~~~~~~~~~~~-----~~~~~~~ 87 (462)
..|.+.++ .+.+..+.+. ..+...++..++.+..|++ ||+|||+.+. .+.+..+++.+... ..++.+.
T Consensus 244 ~~p~~~~~---~g~s~~~~~~--~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~ 318 (402)
T TIGR00897 244 FLPMFVAE---LGFSTSEWLQ--IWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAV 318 (402)
T ss_pred HHHHHHHH---cCCChhHHHH--HHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHH
Confidence 36766654 5666666544 7778889999999999999 9999998764 33333333333322 2346777
Q ss_pred HHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHH
Q 012500 88 IAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVL 167 (462)
Q Consensus 88 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~ 167 (462)
+++..++.|++.+...+ ....+.|..| ++|++++|+.+....+|..++|.+++.+.+..||+..|++.+++.++..++
T Consensus 319 ~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~ 396 (402)
T TIGR00897 319 ALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFL 396 (402)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHH
Confidence 77888889988876554 3456677655 689999999999999999999999999999999999999998887776666
Q ss_pred Hhhc
Q 012500 168 AFVI 171 (462)
Q Consensus 168 ~~~~ 171 (462)
..+.
T Consensus 397 ~~~~ 400 (402)
T TIGR00897 397 TAFI 400 (402)
T ss_pred HHHh
Confidence 5543
No 173
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.20 E-value=3.6e-10 Score=105.77 Aligned_cols=147 Identities=12% Similarity=-0.012 Sum_probs=105.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHH
Q 012500 245 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 323 (462)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 323 (462)
|.++...+..++............+.+..+ .+.++... .......+...+..++.|++.||++|| +.+..+..
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr-----~vl~~~~~ 76 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIALLKE-LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKG-----RVMFIANG 76 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCc-----hhhHHHHH
Confidence 455666666666666554455545555444 45554444 444677788899999999999999999 77776666
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhh
Q 012500 324 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 401 (462)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~ 401 (462)
+.....+......+. +...++.+++.+...+...+.+.+.+|+++|++++|+.+..... +.++||.++|++.+.
T Consensus 77 ~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~-~~~~Gp~lgG~l~~~ 150 (393)
T PRK11195 77 IKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIA-AILLGTVLGGALADP 150 (393)
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 555444433333332 34445678888888888899999999999999999999655554 889999999999985
No 174
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.20 E-value=4.1e-10 Score=105.22 Aligned_cols=167 Identities=15% Similarity=0.011 Sum_probs=124.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHH
Q 012500 245 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 323 (462)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 323 (462)
+.++......+............+|.+.+ .+|.+..+. ...+...++..++.++.|++.||+||| +.+..+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~ 76 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAH-DVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLK-----HILLFLVA 76 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHH-HcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccH-----HHHHHHHH
Confidence 34455555566666666666677776554 477776555 455778899999999999999999998 88877777
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhc
Q 012500 324 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 403 (462)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g 403 (462)
+......+....++.+..++.-++.|++.+...+.......+..++++|+++.+........ +..++|.+.+.+.+..+
T Consensus 77 ~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~l~~~l~~~~g 155 (382)
T PRK10091 77 LCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTV-ANLLGIPLGTYLSQEFS 155 (382)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHH-HHHHhccHHHHHhhhcc
Confidence 77777777777778888887778888877766666666677778888899999998555444 88889999999888765
Q ss_pred chhHHHHHHHHHHHHH
Q 012500 404 NWRKTTLALTSIFFLA 419 (462)
Q Consensus 404 ~~~~~~~~~~~~~~~~ 419 (462)
|+..+...+...+..
T Consensus 156 -wr~~f~~~~~~~~~~ 170 (382)
T PRK10091 156 -WRYTFLLIAVFNIAV 170 (382)
T ss_pred -HHHHHHHHHHHHHHH
Confidence 888777766654433
No 175
>PRK11043 putative transporter; Provisional
Probab=99.20 E-value=5.6e-10 Score=105.19 Aligned_cols=155 Identities=16% Similarity=0.077 Sum_probs=108.6
Q ss_pred HHHHHHHHhhHH--HHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhh
Q 012500 260 VIGAYSYWGPKA--GYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS 336 (462)
Q Consensus 260 ~~~~~~~~~p~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (462)
.......+.|.+ +.+.++.++... ...+...++..++.++.|+++||++|| +.+..+..+.....+.....+
T Consensus 18 ~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~~~~~~~~ 92 (401)
T PRK11043 18 GFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRK-----PVLLAGLSLFALGSLGMLWVE 92 (401)
T ss_pred HHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCc-----HHHHHHHHHHHHHHHHHHHhc
Confidence 333444555544 456678876655 445777888899999999999999999 777766666666555555556
Q ss_pred hhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHH
Q 012500 337 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF 416 (462)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 416 (462)
+.+...+...+.+++.+...+.......+.+++++++...+..+..... +..++|.+.+++.+..| |+..++......
T Consensus 93 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~i~~~l~~~~g-~~~~~~~~~~~~ 170 (401)
T PRK11043 93 SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVAL-SPALAPLLGAWLLNHFG-WQAIFATLFAIT 170 (401)
T ss_pred CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCC-hHHHHHHHHHHH
Confidence 6666666666666665555555556677888888888888887555554 88899999999998765 777777666554
Q ss_pred HHHHH
Q 012500 417 FLAAG 421 (462)
Q Consensus 417 ~~~~~ 421 (462)
++..+
T Consensus 171 ~~~~~ 175 (401)
T PRK11043 171 LLLIL 175 (401)
T ss_pred HHHHH
Confidence 44433
No 176
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.19 E-value=4.6e-10 Score=105.40 Aligned_cols=160 Identities=15% Similarity=0.059 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHH
Q 012500 254 YIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA 332 (462)
Q Consensus 254 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (462)
..............+|.+.++ .+.++... ...+...++..++.++.|+++||+||| +.+..+.....+.....
T Consensus 12 ~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r-----~~l~~~~~~~~i~~~~~ 85 (392)
T PRK10473 12 VLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRK-----PVAIPGAALFIIASLLC 85 (392)
T ss_pred HHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCCh-----HHHHHHHHHHHHHHHHH
Confidence 333444444555667766555 67776555 444667788888999999999999998 77777766666666665
Q ss_pred HHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHH
Q 012500 333 FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLAL 412 (462)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~ 412 (462)
...++.+..++...+.+.+.+...+.....+.+..|+++|+++.+..+..... +..++|.+.+.+.+..+ |+..+++.
T Consensus 86 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i-~~~~~~~i~~~l~~~~g-~~~~~~~~ 163 (392)
T PRK10473 86 SLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCI-IPVLAPVLGHLIMLKFP-WQSLFYTM 163 (392)
T ss_pred HHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcC-hHHHHHHH
Confidence 55566666666666677777666667777888889999999999999766555 78889988888877654 77766666
Q ss_pred HHHHHHHHH
Q 012500 413 TSIFFLAAG 421 (462)
Q Consensus 413 ~~~~~~~~~ 421 (462)
+.+.++...
T Consensus 164 ~~~~~i~~~ 172 (392)
T PRK10473 164 AAMGILVLL 172 (392)
T ss_pred HHHHHHHHH
Confidence 655444333
No 177
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.19 E-value=6e-11 Score=114.63 Aligned_cols=148 Identities=10% Similarity=0.007 Sum_probs=108.9
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccc--h-hH-HHHHHHHHhhcccc
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSF--D-FW-SIAICRMLVGVGEA 100 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~--~-~~-~l~~~r~l~G~~~g 100 (462)
.+.+...... ......+..+++.++.+++ ||+|||++++.+.++.+++.++.+... + .+ ....+-++.+.+.+
T Consensus 301 ~g~~~~~~~~--~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (479)
T PRK10077 301 LGASTDIALL--QTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFA 378 (479)
T ss_pred cCCCCchHHH--HHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHh
Confidence 4555443333 5566777888999999999 999999999999999888887765431 1 11 22223344444443
Q ss_pred c-ccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHH------hhcccchHHHHHHHHHHHHHHHHHHhhccc
Q 012500 101 S-FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV------VGSHLNWRYAFWGEAILMLPFAVLAFVIKP 173 (462)
Q Consensus 101 ~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~------l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p 173 (462)
. ..|....++.|.+|+++|++++++......+|..+++.+.+. +.++.+|++.|++.++++++..++.+++.|
T Consensus 379 ~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (479)
T PRK10077 379 MSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVP 458 (479)
T ss_pred ccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccc
Confidence 3 336678999999999999999999999999999888665544 346788999999998888777777777767
Q ss_pred cc
Q 012500 174 LQ 175 (462)
Q Consensus 174 ~~ 175 (462)
|+
T Consensus 459 e~ 460 (479)
T PRK10077 459 ET 460 (479)
T ss_pred cC
Confidence 64
No 178
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.18 E-value=1.3e-09 Score=104.74 Aligned_cols=151 Identities=14% Similarity=0.094 Sum_probs=98.5
Q ss_pred HHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHH
Q 012500 263 AYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGF 341 (462)
Q Consensus 263 ~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (462)
....+.|. +.+.+|.+..+. ...+...++..++.++.|+++||+|+| +.+..+.++..+..+.....++.+..
T Consensus 54 ~~~~~~~~-l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r-----~~~~~~~~~~~~~~~~~~~~~s~~~l 127 (476)
T PLN00028 54 AAAPLLPI-IRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPR-----YGSAFLLMLTAPAVFCMSLVSSATGF 127 (476)
T ss_pred HHHHHHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-----HHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 33344444 455678886655 334666778888999999999999998 77766666665555555555566655
Q ss_pred HHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhh--------hcchhHHHHHHH
Q 012500 342 LALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH--------VNNWRKTTLALT 413 (462)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~--------~g~~~~~~~~~~ 413 (462)
++..++.|++.+.. .+....+.+.+|+++|+++.|+.+...+. |..+++.+.+.+.+. ..+|+..+++.+
T Consensus 128 ~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~-g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g 205 (476)
T PLN00028 128 IAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNL-GGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPG 205 (476)
T ss_pred HHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHH
Confidence 55555666655543 33444567788889999999998655454 666666665554331 124888887776
Q ss_pred HHHHHHHH
Q 012500 414 SIFFLAAG 421 (462)
Q Consensus 414 ~~~~~~~~ 421 (462)
++.++..+
T Consensus 206 ~l~l~~~l 213 (476)
T PLN00028 206 LLHIIMGI 213 (476)
T ss_pred HHHHHHHH
Confidence 66544433
No 179
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.18 E-value=6.4e-11 Score=111.33 Aligned_cols=142 Identities=8% Similarity=-0.038 Sum_probs=110.3
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHH--Hhhhc--cchhHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFAT--AGCGS--SFDFWSIAI 90 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~--~~~~~--~~~~~~l~~ 90 (462)
.|.+.+++ ++.++.+.+. ......++..++.++.|++ ||+|||+.+..+..+..+.. +...+ .++.+.++.
T Consensus 242 ~~~~~~~~--~g~~~~~~~~--~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (394)
T TIGR00883 242 LPTYLTQT--LGLSANSALL--VLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFF 317 (394)
T ss_pred HHHHHHHh--cCCChhHHHH--HHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHH
Confidence 56666544 4566666444 7788888999999999999 99999998775554444333 22222 356777778
Q ss_pred HHHHhhcccccccccccchhcccCCCCCchhHHHH-HHhhhhhhhhhhhhHHHHhhcccc-hHHHHHHHHHHH
Q 012500 91 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSM-FYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILM 161 (462)
Q Consensus 91 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f~~~~~~~ 161 (462)
..++.|++.+...+...+++.|.+|+++|++++++ ++.+..+|..++|.+++.+.++.| |+..++...+..
T Consensus 318 ~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 318 LVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 88999999888899999999999999999999998 456667899999999999999888 988877776543
No 180
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.18 E-value=6.5e-10 Score=107.40 Aligned_cols=165 Identities=15% Similarity=0.108 Sum_probs=122.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHH
Q 012500 248 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 326 (462)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 326 (462)
....+..++...-...+..-+|.+..+ +|.++.+. .....+.++...+.+..|+++||+||| +.+..+..+..
T Consensus 9 ~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk-----~~l~~~~~~~~ 82 (495)
T PRK14995 9 VIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFK-----RLLMLGGTLFG 82 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHH
Confidence 344444555555566677778877655 67765444 445667778888889999999999999 88888887777
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccC-CcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcch
Q 012500 327 ISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSV-KPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNW 405 (462)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~ 405 (462)
+..+.....++.+..++.-.+.|++.+...+.....+.+.+ |+++|+++.|+.....+. |..++|.+.|++.++.| |
T Consensus 83 ~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~-g~~~gp~lgg~l~~~~g-w 160 (495)
T PRK14995 83 LASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSG-GAAFGPLVGGILLEHFY-W 160 (495)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhccCC-h
Confidence 77777777778888887777888887776666566565665 568999999999655555 99999999999999865 8
Q ss_pred hHHHHHHHHHHHHHH
Q 012500 406 RKTTLALTSIFFLAA 420 (462)
Q Consensus 406 ~~~~~~~~~~~~~~~ 420 (462)
++.|++...+.++..
T Consensus 161 r~~f~i~~~~~~~~~ 175 (495)
T PRK14995 161 GSVFLINVPIVLVVM 175 (495)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888877665544433
No 181
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.18 E-value=1.6e-09 Score=103.49 Aligned_cols=146 Identities=14% Similarity=0.100 Sum_probs=97.6
Q ss_pred HHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHh----hhh
Q 012500 264 YSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL----SSL 338 (462)
Q Consensus 264 ~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 338 (462)
+....|. +.+. +.++.+. ...+...++..++.++.|+++||+|+| +.+..+..+..+..+..... .+.
T Consensus 48 ~~~~~p~-l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k-----~~l~~~~~~~~i~~~~~~~~~~~~~~~ 120 (452)
T PRK11273 48 FALAMPY-LVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPR-----VFLPAGLILAAAVMLFMGFVPWATSSI 120 (452)
T ss_pred HHHhhHH-HHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCc-----hhHHHHHHHHHHHHHHHHhhhcccccH
Confidence 4455664 4555 7776555 444778888899999999999999999 77766666555554444332 244
Q ss_pred HHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhcc-ccchhHHHHHHhhhcchhHHHHHHHHHHH
Q 012500 339 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGD-VPSSPLVGVLQDHVNNWRKTTLALTSIFF 417 (462)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 417 (462)
+..++...+.+++.+...++....+.+.+|+++|+++.++.+...+. |. ..+|.+...+. ...+|+..+++.+...+
T Consensus 121 ~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~l~~~~~~-~~~gw~~~f~i~~~~~~ 198 (452)
T PRK11273 121 AVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNV-GGGLPPLLFLLGMA-WFNDWHAALYMPAFAAI 198 (452)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHH-HhccHHHHHHHHHHHHH
Confidence 45555566677777777676667778888899999999998766666 54 44554332332 22457777776655444
Q ss_pred H
Q 012500 418 L 418 (462)
Q Consensus 418 ~ 418 (462)
+
T Consensus 199 ~ 199 (452)
T PRK11273 199 L 199 (452)
T ss_pred H
Confidence 4
No 182
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.18 E-value=7.1e-10 Score=105.44 Aligned_cols=157 Identities=12% Similarity=0.076 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHH
Q 012500 248 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 326 (462)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 326 (462)
....+..+.............|. +.+.+|.++.+. ...+...++..++.++.|+++||+||| +.+..+.....
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r-----~~l~~~~~~~~ 94 (426)
T PRK12307 21 FSAWLGYVFDGFDFMLIFYIMYL-IKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRK-----PLMMWSIVAYS 94 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-----HHHHHHHHHHH
Confidence 33334344444444444444554 455678886555 445777888899999999999999999 88887777777
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchh
Q 012500 327 ISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR 406 (462)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 406 (462)
+........++.+..++.-.+.|++.+...+....++.+..|+++|+++.++....... |.++++.+.+.+.+..+ |+
T Consensus 95 ~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l-g~~~~~~l~~~l~~~~~-w~ 172 (426)
T PRK12307 95 VGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGI-GNIIAAYFMPSFAEAYG-WR 172 (426)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhH-HHHHHHHHHHHHcccCC-HH
Confidence 77766666777777777778888888877777888888999999999999998655555 88888888888877655 77
Q ss_pred HHHHHH
Q 012500 407 KTTLAL 412 (462)
Q Consensus 407 ~~~~~~ 412 (462)
..+++.
T Consensus 173 ~~f~i~ 178 (426)
T PRK12307 173 AAFFVG 178 (426)
T ss_pred HHHHHH
Confidence 777654
No 183
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.17 E-value=9.2e-10 Score=102.68 Aligned_cols=148 Identities=10% Similarity=0.052 Sum_probs=103.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHH
Q 012500 244 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 322 (462)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 322 (462)
+|.++...+................+.+-++.+++++.+. .+.+++.+...+.++..|++.||+|.| +++..+.
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R-----~v~~~~~ 107 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGR-----RWTVFST 107 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-----HHHHHHH
Confidence 4566666665555555555555555555555689997776 455778888888899999999999998 7777776
Q ss_pred HHHHHHHHHHHHh-----hhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHH
Q 012500 323 FLGAISCLTAFCL-----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGV 397 (462)
Q Consensus 323 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~ 397 (462)
.+..+..+..... ++.+..++.-++.|++ +..+++....+.+.+|+++||++.|+.. ..+.+|..+++.+.+.
T Consensus 108 ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~-g~G~~G~~l~~~l~p~ 185 (462)
T PRK15034 108 AILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGING-GLGNLGVSVMQLVAPL 185 (462)
T ss_pred HHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHH-HHHhhHHHHHHHHHHH
Confidence 6666655555543 5666777777777776 5567777888888899999999999995 3333366656555544
Q ss_pred H
Q 012500 398 L 398 (462)
Q Consensus 398 l 398 (462)
+
T Consensus 186 ~ 186 (462)
T PRK15034 186 V 186 (462)
T ss_pred H
Confidence 3
No 184
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.15 E-value=4.6e-10 Score=108.68 Aligned_cols=164 Identities=14% Similarity=0.093 Sum_probs=123.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHH
Q 012500 250 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS 328 (462)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 328 (462)
..+..+.............|.+.++ +|.++... ...+...++..++.++.|++.||+||| +.+..+..+..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~ 80 (485)
T TIGR00711 7 LMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTR-----RLFLISTFAFTLG 80 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcH-----HHHHHHHHHHHHH
Confidence 3344444455555566667766555 67775554 455778888999999999999999998 7777777777777
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHH
Q 012500 329 CLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKT 408 (462)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~ 408 (462)
.......++.+..++..++.+++.+...+....++.+.+|+++|+++.++.+..... |..++|.+.+++.++.+ |+..
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~~-w~~~ 158 (485)
T TIGR00711 81 SLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLV-APALGPTLGGWIIENYH-WRWI 158 (485)
T ss_pred HHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-HhhhhhccHhHhccCcC-ceeh
Confidence 666666677777778888888888877788888899999999999999999655555 89999999999998765 7777
Q ss_pred HHHHHHHHHHHHH
Q 012500 409 TLALTSIFFLAAG 421 (462)
Q Consensus 409 ~~~~~~~~~~~~~ 421 (462)
++......++...
T Consensus 159 f~~~~~~~~~~~~ 171 (485)
T TIGR00711 159 FLINVPIGIIVVV 171 (485)
T ss_pred hhhhhHHHHHHHH
Confidence 7766555444333
No 185
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.14 E-value=6e-10 Score=104.09 Aligned_cols=149 Identities=15% Similarity=0.145 Sum_probs=113.1
Q ss_pred HHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHH
Q 012500 263 AYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGF 341 (462)
Q Consensus 263 ~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (462)
.....+|.+.++ +|.++.+. ...+...++..++.++.|++.||+||| +.+..+..+...........++.+..
T Consensus 9 ~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~ 82 (377)
T PRK11102 9 MYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRK-----PVILGGTLVFALAAVACALAQTIDQL 82 (377)
T ss_pred HHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCCh-----HHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 344556666655 67876655 445777888899999999999999998 77777777766666666666677777
Q ss_pred HHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHHHHH
Q 012500 342 LALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLA 419 (462)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 419 (462)
.....+.+++.+...+.....+.+..|+++|+++.++.+..... |..++|.+.+.+.+..+ |+..++..+...++.
T Consensus 83 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~ 158 (377)
T PRK11102 83 IYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTI-APLLAPIIGGWLLVWFS-WHAIFWVLALAAILA 158 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC-hHHHHHHHHHHHHHH
Confidence 77777778777777777788888888889999999999755555 88999999999998765 777766655554443
No 186
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.14 E-value=3.2e-10 Score=105.96 Aligned_cols=141 Identities=13% Similarity=0.070 Sum_probs=117.2
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRML 94 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 94 (462)
.|.+.++ .+.++.+.+. ..+...++.++..++.|++ ||+|+|+.+..+.+..+++.++.+++++.+.+++..++
T Consensus 228 ~~~~~~~---~g~s~~~~g~--~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 302 (382)
T PRK11128 228 SAIYWQA---AGYSASTIGY--LWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQIL 302 (382)
T ss_pred HHHHHHH---CCCCHhHHHH--HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 4555543 5677666555 7778888899999999999 99999999999999999988888899999999999999
Q ss_pred hhcccccccccccchhcccCCCCCchhHHHHHH-hhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHH
Q 012500 95 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFY-MCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLP 163 (462)
Q Consensus 95 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~ 163 (462)
.|++.+...+....++.+. +++++++..+..+ ....+|..+||.++|.+.+.+|+ ..|+..+++.++
T Consensus 303 ~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~ 370 (382)
T PRK11128 303 HCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALP 370 (382)
T ss_pred HHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHH
Confidence 9999998888888888887 5567789899886 55677889999999999999988 466666655543
No 187
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.13 E-value=1.2e-09 Score=102.59 Aligned_cols=152 Identities=11% Similarity=0.049 Sum_probs=105.3
Q ss_pred HHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhh
Q 012500 258 NFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS 336 (462)
Q Consensus 258 ~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (462)
..........+|.+. +.++.++... ...+...++..++.++.|+++||+||| +.+..+........+.....+
T Consensus 21 ~~~~~~~~p~~~~i~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~ 94 (394)
T PRK11652 21 QMAQTIYVPAIADMA-RDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRR-----PVILVGMSIFILGTLVALFAH 94 (394)
T ss_pred HHHHHHHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh-----HHHHHHHHHHHHHHHHHHHHc
Confidence 333333444455554 4577776555 445777888899999999999999998 777766666666555555556
Q ss_pred hhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHH
Q 012500 337 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF 416 (462)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 416 (462)
+.+..++...+.+++.+...+.......+..++++++.+.+..+..... +..++|.+.+.+.+..| |+..+.+.+...
T Consensus 95 ~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~i~~~l~~~~g-~~~~f~~~~~~~ 172 (394)
T PRK11652 95 SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILV-SPLLAPLIGGLLTTLFG-WRACYLFLLLLG 172 (394)
T ss_pred cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccC-hHHHHHHHHHHH
Confidence 6666666666666666554444455566667778899999888655544 88889999999888765 777777665544
Q ss_pred H
Q 012500 417 F 417 (462)
Q Consensus 417 ~ 417 (462)
+
T Consensus 173 ~ 173 (394)
T PRK11652 173 A 173 (394)
T ss_pred H
Confidence 3
No 188
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.13 E-value=2e-08 Score=92.75 Aligned_cols=326 Identities=13% Similarity=0.105 Sum_probs=176.6
Q ss_pred hhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhc------c--c-------hhHHHHHHHHHhhccc
Q 012500 36 SVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGS------S--F-------DFWSIAICRMLVGVGE 99 (462)
Q Consensus 36 s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~------~--~-------~~~~l~~~r~l~G~~~ 99 (462)
+.....-.+..++.++..|++ ||..|.+++..+.+.--++..+.+. . + -...+++.-.+.|.-.
T Consensus 41 siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~ 120 (432)
T PF06963_consen 41 SIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIE 120 (432)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHH
Confidence 446667777888999999999 9999999877765544333322221 1 1 1112222222222211
Q ss_pred c-cccccccchhcccC------CCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhcc
Q 012500 100 A-SFISLAAPFIDDNA------PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 172 (462)
Q Consensus 100 g-~~~~~~~~~i~~~~------~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 172 (462)
- .......++=.||. +++++.+.++...-.=.+..+++|++.|.+.+..+.+....+.++..++...+-+++.
T Consensus 121 ~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l 200 (432)
T PF06963_consen 121 RLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLL 200 (432)
T ss_pred HHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 12222333445664 3445667777777777788999999999999988999888888887777666655554
Q ss_pred ccc---cCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHH
Q 012500 173 PLQ---LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVV 249 (462)
Q Consensus 173 p~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (462)
..- .+....+++++..+. +++++ +..+..++....+...+..+...++++..++.+.+..
T Consensus 201 ~~VY~~~P~L~~~~~~~~~~~----------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vfla 263 (432)
T PF06963_consen 201 ARVYNSVPALAVKKRSSESES----------SSDEE-------SSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLA 263 (432)
T ss_pred HHHHHhChHhcCCCCCccccc----------ccccc-------ccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHH
Confidence 211 111111111110000 00000 0000000000001111222333455667777775555
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHH---HH
Q 012500 250 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF---LG 325 (462)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~---~~ 325 (462)
.+. ..+.++..-++...+..|+.+. |.++... .+-....+.++.++++..++.+|+|.. +.-..+.. .+
T Consensus 264 s~a-lalLY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlv-----r~G~~~l~~q~~~ 336 (432)
T PF06963_consen 264 SFA-LALLYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLV-----RAGLWSLWWQWVC 336 (432)
T ss_pred HHH-HHHHHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----hhHHHHHHHHHHH
Confidence 444 4444444445566677788876 7776555 334777888899999999999999976 33322222 22
Q ss_pred HHHHHHHHHhhh-------hHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhh
Q 012500 326 AISCLTAFCLSS-------LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 385 (462)
Q Consensus 326 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (462)
...+....+.+. ....+..+.+.=++.-+.=-...-++.+.+|+++||+..|+-+...+.
T Consensus 337 L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~l 403 (432)
T PF06963_consen 337 LALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSL 403 (432)
T ss_pred HHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHH
Confidence 222222222221 112222222222222222334466777889999999999999766665
No 189
>PRK09952 shikimate transporter; Provisional
Probab=99.12 E-value=6.6e-10 Score=105.62 Aligned_cols=152 Identities=11% Similarity=0.030 Sum_probs=107.5
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhc---c-chhHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGS---S-FDFWSIAI 90 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~---~-~~~~~l~~ 90 (462)
.|.+.++. ++.++..... ......+...++.++.|++ ||+|||+++..+.++..++.+.... . ++.+.+++
T Consensus 273 ~~~y~~~~--~g~s~~~~~~--~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (438)
T PRK09952 273 ALNYSTQN--LGLPRELFLN--IGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFF 348 (438)
T ss_pred HHHHHHHh--cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHH
Confidence 55555544 4555543222 4445566667888999999 9999999998887766555433322 2 23444455
Q ss_pred HHHHhhcccccccccccchhcccCCCCCchhHHHHHH-hhhhhhhhhhhhHHHHhhccc--chHHHHHHHHHHHHHHHHH
Q 012500 91 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFY-MCIPTGVALGYVYGGVVGSHL--NWRYAFWGEAILMLPFAVL 167 (462)
Q Consensus 91 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~~--gwr~~f~~~~~~~~~~~~~ 167 (462)
..++.|++.+...+...+++.|.+|.+.|+...++.. .+..+|..++|.+.+++.+.. +|+..+...++..++..+.
T Consensus 349 ~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~ 428 (438)
T PRK09952 349 SIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMT 428 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHH
Confidence 6677788888778888899999999999998888854 445589999999999998743 4888888877777666555
Q ss_pred Hhhc
Q 012500 168 AFVI 171 (462)
Q Consensus 168 ~~~~ 171 (462)
.+..
T Consensus 429 ~~~~ 432 (438)
T PRK09952 429 ALLM 432 (438)
T ss_pred HHHc
Confidence 5433
No 190
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.12 E-value=1.2e-09 Score=100.83 Aligned_cols=152 Identities=10% Similarity=-0.050 Sum_probs=103.7
Q ss_pred HHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhH
Q 012500 261 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLY 339 (462)
Q Consensus 261 ~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (462)
...+...+|.+.+ +++.++.+. ...+...++..++.+..|++.||+||| +.+.................++.+
T Consensus 7 ~~~~~~~lp~i~~-~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~ 80 (368)
T TIGR00903 7 WVTFSPVLSLVAE-DIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKR-----WFLFGSLATFAAAAGRLLDPFNYE 80 (368)
T ss_pred HHHHHhhHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccch-----HHHHHHHHHHHHHHHHHHHhccHH
Confidence 3444555665544 578887665 445777888899999999999999987 655444433333322222224566
Q ss_pred HHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHHHHH
Q 012500 340 GFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLA 419 (462)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 419 (462)
..++.-++.|++.+.. .+......+.+|+++|+++.++.+..... |..+++.+.+++.+..| |+..++..+.+.++.
T Consensus 81 ~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~l-G~~l~~~~~~~l~~~~g-Wr~~f~~~~~l~~~~ 157 (368)
T TIGR00903 81 WLLACQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYL-GIIFALAAGLKIYTAGG-LQLLIIPIAAVAAAG 157 (368)
T ss_pred HHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHccc-hHHHHHHHHHHHHHH
Confidence 6666667777776643 34444557889999999999999655555 99999999999988765 888887766654444
Q ss_pred HH
Q 012500 420 AG 421 (462)
Q Consensus 420 ~~ 421 (462)
.+
T Consensus 158 ~~ 159 (368)
T TIGR00903 158 II 159 (368)
T ss_pred HH
Confidence 33
No 191
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.11 E-value=5.1e-09 Score=96.17 Aligned_cols=131 Identities=13% Similarity=0.035 Sum_probs=108.8
Q ss_pred hhHHHHHHhCCCcch-h-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 012500 268 GPKAGYNIYHMSNAD-M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALF 345 (462)
Q Consensus 268 ~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (462)
...++.+.+|++..+ . .+......+..+..+.+|++.||+|.| +.+....+.-.+...+..+.++...+.+.-
T Consensus 48 a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K-----~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R 122 (511)
T TIGR00806 48 ITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK-----PVLVLQALSFVCVWLLLLLGTSVWHMQLME 122 (511)
T ss_pred HHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334666689999776 4 555778889999999999999999999 888888888888777777777888888888
Q ss_pred HHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhH
Q 012500 346 TVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRK 407 (462)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 407 (462)
++.|++.+..+ ....++.+-+|+++|+++.|+.+..... |.++++++.+++ ...| |+.
T Consensus 123 ~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~v-G~~Ia~~L~qll-~s~g-Wr~ 180 (511)
T TIGR00806 123 VFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLL-GVFLSSVLGQLL-VTLG-WIS 180 (511)
T ss_pred HHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH-HhcC-chh
Confidence 99999999888 8888999999999999999999877666 999999999984 4444 443
No 192
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.09 E-value=3.9e-09 Score=99.18 Aligned_cols=145 Identities=9% Similarity=0.021 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHH
Q 012500 248 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 326 (462)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 326 (462)
.......+...+.........|.+ ++.++.+..+. ...+...++..++.+..|++.||+|+| +.+..+..+.+
T Consensus 6 ~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r-----~~~~~g~~l~~ 79 (410)
T TIGR00885 6 ALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYK-----AGILLGLFLYA 79 (410)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHHH
Confidence 334444455555554555666655 66788887665 455778889999999999999999999 77777777666
Q ss_pred HHHHHHHH---hhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHH
Q 012500 327 ISCLTAFC---LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 399 (462)
Q Consensus 327 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~ 399 (462)
........ .++.+..++..++.+++.+...+..+.+..+..|++++++..++.+...+. |..++|.+.+.+.
T Consensus 80 ~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-G~~~g~~i~~~l~ 154 (410)
T TIGR00885 80 LGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPF-GSIIGMVVAQQLI 154 (410)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 65554322 235666677778888888888888888888888888999999999766665 9999998888775
No 193
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.09 E-value=2.4e-09 Score=101.01 Aligned_cols=147 Identities=12% Similarity=0.028 Sum_probs=104.5
Q ss_pred HHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 012500 266 YWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLAL 344 (462)
Q Consensus 266 ~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (462)
..+|.+. +.++.++... ...+...++..++.++.|+++||+||| +.+..+..+...........++.+..+..
T Consensus 34 ~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r-----~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 107 (406)
T PRK15402 34 PGMLAVV-EDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRR-----PVMLAGVAFFILTCLAILLAQSIEQFTLL 107 (406)
T ss_pred cchHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-----HHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 3444443 5577776555 344677888889999999999999999 77777766666666655556666666666
Q ss_pred HHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHHHHHH
Q 012500 345 FTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 420 (462)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 420 (462)
..+.+.+.+...+.....+.+.+|++.|.++.++....... +..++|.+.+.+.+..+ |+..+++.+++.++..
T Consensus 108 ~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~i~~~l~~~~~-w~~~~~~~~~~~~~~~ 181 (406)
T PRK15402 108 RFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALL-APLLGPLVGAALIHVLP-WRGMFVLFAALAALSF 181 (406)
T ss_pred HHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHHH
Confidence 66666666655555666777888888888888888544444 78889999999888655 7777776665544433
No 194
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.07 E-value=2.6e-10 Score=102.46 Aligned_cols=154 Identities=11% Similarity=0.116 Sum_probs=126.1
Q ss_pred HHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 012500 273 YNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELL 351 (462)
Q Consensus 273 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (462)
++.++.++... .+.....+...+.++++|++.||++|+ .++..+..+-....+...+..+.|...++=.+.|++
T Consensus 60 ~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~-----~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiG 134 (493)
T KOG1330|consen 60 QTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRK-----RVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIG 134 (493)
T ss_pred HHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcc-----eEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 44567776554 556788889999999999999999998 777777766666666666667888888888999999
Q ss_pred HHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012500 352 VFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKS 431 (462)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (462)
.....+..++++.|.+|.++|++..++.+..... |..+|-.....+.+..+.|++++...+++.++..++.++....|+
T Consensus 135 eAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipv-GsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 135 EASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPV-GSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred hhhhcccchhHhhhcCcchhhhHHHHHhhhhccc-ccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 9999999999999999999999999999988877 888888888888888888999999888887777766665554454
Q ss_pred c
Q 012500 432 I 432 (462)
Q Consensus 432 ~ 432 (462)
|
T Consensus 214 r 214 (493)
T KOG1330|consen 214 R 214 (493)
T ss_pred c
Confidence 4
No 195
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.07 E-value=7.4e-10 Score=104.12 Aligned_cols=135 Identities=8% Similarity=0.032 Sum_probs=115.2
Q ss_pred hhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccccccchhcccC
Q 012500 36 SVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNA 114 (462)
Q Consensus 36 s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~ 114 (462)
+...+...+...++.+..+++ ||+|||+.+.++.++.++...+...++|.+.+++.++++|++..........+..+..
T Consensus 257 g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 336 (396)
T TIGR00882 257 GYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQF 336 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 447777788888889999999 9999999999999999998888888899999999999999987766666666778888
Q ss_pred CCCCchhHHHH-HHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhh
Q 012500 115 PVPQKTAWLSM-FYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 170 (462)
Q Consensus 115 ~~~~r~~~~~~-~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 170 (462)
|++.++...+. ++....+|..+++.++|++.+..||+..|.+.+++.++..+...+
T Consensus 337 ~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 337 DVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred CcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 87888877666 678899999999999999999999999999999887776665544
No 196
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.05 E-value=6.5e-09 Score=100.78 Aligned_cols=110 Identities=9% Similarity=0.048 Sum_probs=84.7
Q ss_pred hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhh------hHHHHHHHHHHHHHHHhccc
Q 012500 284 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS------LYGFLALFTVGELLVFATQA 357 (462)
Q Consensus 284 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 357 (462)
.+.+...++.+++.++.|++.||+||| +.+....++..+...+....++ .+..++.-++.|++.+...+
T Consensus 60 ~~~~~~~ig~~ig~~~~g~l~d~~Grr-----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~ 134 (502)
T TIGR00887 60 AVNGSASIGTLAGQLFFGWLADKLGRK-----RVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYP 134 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccH-----HHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhH
Confidence 455777888999999999999999999 7776665555554444333332 45667777788888888888
Q ss_pred cceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHH
Q 012500 358 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 399 (462)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~ 399 (462)
....+..|.+|++.|+++.++.+..... |..+++.+...+.
T Consensus 135 ~~~~~~~e~~p~~~Rg~~~~~~~~~~~~-g~~~g~~~~~~~~ 175 (502)
T TIGR00887 135 LSAIITSEFATKKWRGAMMAAVFAMQGF-GILAGAIVALIVL 175 (502)
T ss_pred HHHHHHHHhcChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 8999999999999999999999655555 8888887766554
No 197
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.05 E-value=1.9e-09 Score=103.77 Aligned_cols=144 Identities=9% Similarity=-0.010 Sum_probs=110.7
Q ss_pred cccccccccchhhHH-HHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHh---hhcc-chhHHHHHHHHHhhccc
Q 012500 26 LSLRKLAAGSSVNVL-EFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAG---CGSS-FDFWSIAICRMLVGVGE 99 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~-~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~---~~~~-~~~~~l~~~r~l~G~~~ 99 (462)
.+.+..+.+. ... ...++.+++.++.|++ ||+|+|+.+..+.++.+++.+. .+.. ++.+.+...-+++.+..
T Consensus 253 ~G~s~~~~g~--~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~ 330 (491)
T PRK11010 253 VGFDAGEVGL--VNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCG 330 (491)
T ss_pred cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Confidence 5777777555 664 5567889999999999 9999999887766655554432 2333 45555555666655555
Q ss_pred ccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhc
Q 012500 100 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 171 (462)
Q Consensus 100 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 171 (462)
|...+...++..+..+++.+++..++.+...++|..+++.++|.+.+..||+..|.+.++++++..+...+.
T Consensus 331 g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 331 GMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 555566678888999999999999999999999999999999999999999999999988887776666554
No 198
>PRK15075 citrate-proton symporter; Provisional
Probab=99.05 E-value=1.3e-09 Score=103.61 Aligned_cols=132 Identities=9% Similarity=-0.078 Sum_probs=93.6
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHh----hhccchhHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAG----CGSSFDFWSIAI 90 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~----~~~~~~~~~l~~ 90 (462)
.|.+.++. .+.+..+.+. ....+.++.+++.++.|++ ||+|||+++..+.++..+.... ....+++....+
T Consensus 261 ~p~~l~~~--~g~~~~~~~~--~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (434)
T PRK15075 261 TPTFGKTV--LHLSAADSLL--VTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLA 336 (434)
T ss_pred HHHHHHHh--cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHH
Confidence 67666654 3555555444 7778888899999999999 9999999887765444332211 112344444445
Q ss_pred HHHHhhcccccccccccchhcccCCCCCchhHHHHHHh-hhhhhhhhhhhHHHHhhcccchH
Q 012500 91 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYM-CIPTGVALGYVYGGVVGSHLNWR 151 (462)
Q Consensus 91 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~g~~~~~~l~~~~gwr 151 (462)
..++.|++.+...+....++.|.+|+++|+..+++... +..++..++|.+.+++.++.|++
T Consensus 337 ~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 337 VELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 55666666666666667889999999999999998644 44445778999999999988864
No 199
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.04 E-value=7.1e-09 Score=97.76 Aligned_cols=142 Identities=12% Similarity=0.097 Sum_probs=103.9
Q ss_pred HHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 012500 272 GYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGEL 350 (462)
Q Consensus 272 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (462)
..+.++.+.... ...+.+.++..++.++.|+++||+||| +.+..+..+..+........++.+..++.-++.|+
T Consensus 42 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr-----~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi 116 (413)
T PRK15403 42 VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRR-----PVLITGALIFTLACAATLFTTSMTQFLIARFIQGT 116 (413)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCch-----HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 345577775554 445777888899999999999999999 77777776666666666666777777777677676
Q ss_pred HHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHHHHHH
Q 012500 351 LVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 420 (462)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 420 (462)
+.+...+.......+.+++++++++.++.+..... +..++|.+.+.+.+..| |+..|+..++..++..
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~lg~~l~~~~g-w~~~f~~~~~~~~i~~ 184 (413)
T PRK15403 117 SICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLV-APIIGPLSGAALMHFVH-WKVLFAIIAVMGLIAF 184 (413)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHH
Confidence 66544444455666778888899999998666655 88899989888887655 8888877766544443
No 200
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.04 E-value=2.4e-09 Score=101.31 Aligned_cols=143 Identities=15% Similarity=0.158 Sum_probs=125.0
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCCc--hhHHHHHHHHHHHHHhhhc--------cchhHHHHHHHHH
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPF--RLIGVGLSVWTFATAGCGS--------SFDFWSIAICRML 94 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr--~~l~~~~~~~~~~~~~~~~--------~~~~~~l~~~r~l 94 (462)
++++..+... ......+...+++.+.|++ ||+|.| +++..+++++.+..+...+ .++-+.+++.-++
T Consensus 312 lg~s~~~l~~--~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~ 389 (477)
T PF11700_consen 312 LGMSTTQLIV--FGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVL 389 (477)
T ss_pred cCcCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHH
Confidence 7888888666 8888889999999999999 999999 8999998888766666665 6788899999999
Q ss_pred hhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccc-hHHHHHHHHHHHHHHHHHHhh
Q 012500 95 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFV 170 (462)
Q Consensus 95 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~ 170 (462)
.|+..|..++...++.+|..|+++.+..+|++....-....+||++-+.+.+..| -|+.+....++.++..++.++
T Consensus 390 ~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 390 IGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred HHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999998876 788888777766555554433
No 201
>TIGR00898 2A0119 cation transport protein.
Probab=99.03 E-value=2e-09 Score=104.67 Aligned_cols=136 Identities=9% Similarity=-0.101 Sum_probs=108.9
Q ss_pred hHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchh--HHHHHHHHHhhcccccccccccchhcccC
Q 012500 38 NVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDF--WSIAICRMLVGVGEASFISLAAPFIDDNA 114 (462)
Q Consensus 38 ~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~g~~~~~~~~~i~~~~ 114 (462)
......+..+++.++.+++ ||+|||+.+..+.++.+++.++..+.++. +...+.-++.+++.+...+....+..|.+
T Consensus 360 ~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 439 (505)
T TIGR00898 360 DLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELY 439 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 3445566677888889999 99999999999999999888888776654 44555666777777777888889999999
Q ss_pred CCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhcccccc
Q 012500 115 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL 176 (462)
Q Consensus 115 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 176 (462)
|++.|++++|+.+....+|.+++|.+.+ + +..++..++++.++..++..++.+ ++||+.
T Consensus 440 p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~lpet~ 498 (505)
T TIGR00898 440 PTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTL-FLPETK 498 (505)
T ss_pred cHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHH-cCcCCC
Confidence 9999999999999999999999999988 4 445678888888887777666554 447653
No 202
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.02 E-value=2.5e-09 Score=93.66 Aligned_cols=140 Identities=16% Similarity=0.188 Sum_probs=100.0
Q ss_pred hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HHHHHHHHHhccccceee
Q 012500 284 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLAL-FTVGELLVFATQAPVNYV 362 (462)
Q Consensus 284 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 362 (462)
.+.+.+.++..+.++..|.++||+||| ..+..+.+..++..++.....+. ..++. =++.| ...+......++
T Consensus 72 flGSsF~ilQ~~sS~~~G~~SD~yGRk-----pvll~c~~~va~s~ll~~~S~~F-~afv~aR~l~G-i~kgnl~v~rAi 144 (451)
T KOG2615|consen 72 FLGSSFSILQFISSPLWGCLSDRYGRK-----PVLLACLIGVALSYLLWALSRNF-AAFVLARFLGG-IFKGNLSVIRAI 144 (451)
T ss_pred hHhhHHHHHHHHhhhhhhhhhhhhCch-----HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhh-hccCchHHHHHH
Confidence 455788899999999999999999999 88887777777766666666666 33333 33333 344556678899
Q ss_pred eeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHh---hhcchhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012500 363 CLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD---HVNNWRKTTLALTSIFFLAAGIWFVGIFLKS 431 (462)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (462)
++|.+++++|+.+++..+...+. |.++||.++|++.. ..|.+...+--+.++.....-+.....++||
T Consensus 145 isdV~sek~r~l~ms~v~~a~~l-GfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpE 215 (451)
T KOG2615|consen 145 ISDVVSEKYRPLGMSLVGTAFGL-GFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPE 215 (451)
T ss_pred HHhhcChhhccceeeeeehhhhc-chhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999999999999766666 99999999999988 5566644443333333333323333345554
No 203
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.02 E-value=1.8e-09 Score=98.39 Aligned_cols=141 Identities=10% Similarity=0.113 Sum_probs=124.7
Q ss_pred chhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccccccchhccc
Q 012500 35 SSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDN 113 (462)
Q Consensus 35 ~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~ 113 (462)
.|.+.+...+.-++...++.++ +|+|.|+.++++.+++.+=.+++++++|.+.+.+.+.+.|+-.+........|+++.
T Consensus 261 ~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~ 340 (412)
T PF01306_consen 261 YGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAH 340 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4668888888888999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHH-HHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccccc
Q 012500 114 APVPQKTAWLSM-FYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 175 (462)
Q Consensus 114 ~~~~~r~~~~~~-~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 175 (462)
+|+|-.++...+ .+.+.++|..+.+.++|.+.|+.|.+.+|++.+.+.++..++..+.++++
T Consensus 341 fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 341 FDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp S-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred CCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCC
Confidence 998887777777 47889999999999999999999999999999999888888888887543
No 204
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.00 E-value=1.5e-06 Score=81.52 Aligned_cols=238 Identities=13% Similarity=0.029 Sum_probs=139.4
Q ss_pred chhhHHHHHHHHHhh-hhhhccc-cccCCchhHHHHHHHHHHHHHhhhcc----ch------------------------
Q 012500 35 SSVNVLEFTVTQLVC-SSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSS----FD------------------------ 84 (462)
Q Consensus 35 ~s~~~~~~~~~~~~~-~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~----~~------------------------ 84 (462)
..++-+...+...+. .++.+++ +|++|++++-.....+.....++++. ++
T Consensus 45 i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~ 124 (472)
T TIGR00769 45 IPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIA 124 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHH
Confidence 455777776666655 8899999 99999999888777766666665544 11
Q ss_pred ---hHHHHHHHHHhhcccccccc-cccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhc--------ccchH-
Q 012500 85 ---FWSIAICRMLVGVGEASFIS-LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS--------HLNWR- 151 (462)
Q Consensus 85 ---~~~l~~~r~l~G~~~g~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~--------~~gwr- 151 (462)
.|...+.-+...+-.....+ .-..++.|.++.+|-.|..++...+.++|.++++.+..++.+ .-.|.
T Consensus 125 ~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~ 204 (472)
T TIGR00769 125 ILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHV 204 (472)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHH
Confidence 22222333333333333443 567789999999999999999999999999999999888763 12342
Q ss_pred ---HHHHHHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccch
Q 012500 152 ---YAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFL 228 (462)
Q Consensus 152 ---~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (462)
..+.+.++.+++...+...+ .+... ++++.... ++ .++++
T Consensus 205 ~~~~l~~i~~~~~~~~~~~~~~l-~~~~~-----~~~~~~~~----------------------~~--~~~k~------- 247 (472)
T TIGR00769 205 SLKNLMVIVICSGLAIILLYWWV-NRNVL-----TDPRSYNP----------------------AL--KEKKV------- 247 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-Hhccc-----CCccccch----------------------hh--ccccC-------
Confidence 23344443333333333322 21110 00000000 00 00000
Q ss_pred hhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh--h---hhhhHHHhhhhhhhhhhHH
Q 012500 229 NQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM--M---FGGVTIVCGIVGTISGGFI 303 (462)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~g~l 303 (462)
++..+..++++.++++|.++.+.+...+++...+.+..---....+.+. ++.+. . +....++..++..++.+++
T Consensus 248 k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p-~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l 326 (472)
T TIGR00769 248 KPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYP-SPNEYSAFMGDFSTWTGVVSVTMMLLSGNV 326 (472)
T ss_pred CCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1112345678999999999888887777777665555433334455442 32221 2 2233445555556666888
Q ss_pred Hhhhccc
Q 012500 304 LDQMGAT 310 (462)
Q Consensus 304 ~d~~~~~ 310 (462)
.+|+|-+
T Consensus 327 ~~~~Gw~ 333 (472)
T TIGR00769 327 IRKYGWL 333 (472)
T ss_pred HHHhhHH
Confidence 8888876
No 205
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.99 E-value=3e-09 Score=102.23 Aligned_cols=140 Identities=12% Similarity=0.107 Sum_probs=102.6
Q ss_pred hCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHH
Q 012500 276 YHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL--SSLYGFLALFTVGELLV 352 (462)
Q Consensus 276 ~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 352 (462)
++.+.... .+.+...++..++.++.|++.||+|+| +.+..+.++..+..++.... .+.+..++.-++.|++.
T Consensus 71 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~ 145 (465)
T TIGR00894 71 FKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFK-----WSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQ 145 (465)
T ss_pred CCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcc-----hhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhc
Confidence 45554444 445777888999999999999999998 77766665555544443222 33455566667778888
Q ss_pred HhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHHHHHHH
Q 012500 353 FATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAG 421 (462)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 421 (462)
+...+....++.+..|+++|+++.++.+..... |.+++|.+.+.+.+...+|+..|++.++..++..+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~ 213 (465)
T TIGR00894 146 GSVSPATHKIIVKWAPPKERSRLLGMSTSGFQL-GTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSL 213 (465)
T ss_pred ccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHH
Confidence 888888888999999999999999999655565 99999999999988743488878777665444433
No 206
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.96 E-value=3.5e-09 Score=113.59 Aligned_cols=149 Identities=15% Similarity=0.052 Sum_probs=121.7
Q ss_pred hhhhhhhccccccccc-cccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 012500 16 LKRSMKKKKFLSLRKL-AAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRM 93 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 93 (462)
+|.+..+. ++.+.. +.+ ++.+.+.++.++++++.|++ ||+++|+++.++.++.+++.++..+..+.+.+++..+
T Consensus 255 ~~~~~~~~--~g~s~~~~~g--~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (1146)
T PRK08633 255 FPAYAKEV--LGLDNTFQVQ--YLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFF 330 (1146)
T ss_pred hHHHHHHH--hCCCcHHHHH--HHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 56555554 455555 544 48899999999999999999 9999999999999999998888888889999999999
Q ss_pred HhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhc-ccchHHHHHHHHHHHHHHHHHH
Q 012500 94 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-HLNWRYAFWGEAILMLPFAVLA 168 (462)
Q Consensus 94 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-~~gwr~~f~~~~~~~~~~~~~~ 168 (462)
+.|++.+...+...+++.+..|+++||+++++.+....+|.++++.+++.+.. .+++...|++.+.+.++..+..
T Consensus 331 ~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (1146)
T PRK08633 331 LFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIGTLYT 406 (1146)
T ss_pred HHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999888899999999999999999999999999999888888776654 2456667776666554444333
No 207
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.96 E-value=4.6e-09 Score=90.59 Aligned_cols=349 Identities=12% Similarity=0.006 Sum_probs=212.1
Q ss_pred ch-hHHHHHHHHHHH----------hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHH
Q 012500 2 SF-CIHVLLCLIGLI----------LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGL 69 (462)
Q Consensus 2 ~~-~i~~~~~~~~~~----------~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~ 69 (462)
+| -+.+++|.+|++ .|.....+ .++++.++..- +.=...-.+++.-.+.=.+ |..-.|++++.-.
T Consensus 3 ~W~~~~~llC~yG~~~e~RPseP~~tpyl~gp~--~NlT~~~l~~e-vyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ 79 (433)
T KOG3810|consen 3 SWLKITCLLCLYGFVREFRPSEPYLTPYLLGPD--KNLTEDQLTNE-VYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQA 79 (433)
T ss_pred chhhhhhhhhhhhHHHHhCCCCCccchhccCCC--CCccHHHHhcc-cccchhHHHHHHHHHHHHHhhhhhcceeeeeec
Confidence 56 677889999998 23222222 24444443310 1111111222333333345 7778999999888
Q ss_pred HHHHHHHHhhhccchhHHHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhccc-
Q 012500 70 SVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL- 148 (462)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~- 148 (462)
+.......+.-+.++.+.+=+.-+.-|...+ ...+-++++-+.++|+++.++.+...+..-.|-..|..++..+...-
T Consensus 80 ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tA-aEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~ 158 (433)
T KOG3810|consen 80 LSGVPVWIMLVFGPSVKAMQVLEFFYGPATA-AEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLET 158 (433)
T ss_pred cchhHHHHHHHhcCCchheeeehhhcChHHH-HHHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcc
Confidence 8888888889999999999999999998877 55678899999999999999999999999999999998888877542
Q ss_pred -chHHHHHHHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccc
Q 012500 149 -NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRF 227 (462)
Q Consensus 149 -gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (462)
+....-.+.-... .+....-+++|..++..-....+++. ...+ .++..++. +..+..
T Consensus 159 ~sy~~LN~ISL~~~-~ia~~~A~fLP~v~rSl~f~~~~~~~-------~v~~-------~e~~~~~~-------~~~~~l 216 (433)
T KOG3810|consen 159 LSYTTLNYISLAEV-TIAVLLALFLPRVKRSLYFHRLEDKI-------SVGD-------LEEMNPQA-------SYMSYL 216 (433)
T ss_pred cchhhhchhhHHHH-HHHHHHHhhCCCCchhhhhhcccccc-------eecc-------chhcCccc-------hhhHHH
Confidence 3333333332222 22223333334322111000000000 0000 00000000 000001
Q ss_pred hhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh--hhh-hhHHHhhhhhhhhhhHHH
Q 012500 228 LNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM--MFG-GVTIVCGIVGTISGGFIL 304 (462)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~g~l~ 304 (462)
..-....+++++...+||.+..-.+-+.+...+++-+.++....-.+.. .++... +.. ++..+.+.++.+..|++.
T Consensus 217 ~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~-~~~~~vyNG~veAv~tlLGa~~~~~~g~l~ 295 (433)
T KOG3810|consen 217 RGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVA-PNPANVYNGAVEAVSTLLGAIAALAAGYLN 295 (433)
T ss_pred HHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhC-CCchhhhcCHHHHHHHHHHHHHHHHHHhee
Confidence 1223344556777788888888777777777777777776665555543 222222 111 444555666777788876
Q ss_pred hhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHH
Q 012500 305 DQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAIST 380 (462)
Q Consensus 305 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (462)
-.+.|+.. .++..+...-+.+.+.+...++.|...+...++........+.....++.....+.-|...|+.+
T Consensus 296 i~w~r~g~---~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNT 368 (433)
T KOG3810|consen 296 INWNRWGD---LLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINT 368 (433)
T ss_pred eccchhhH---HHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHH
Confidence 55555421 34455566666667777777888888888888888887777777777777777888888888874
No 208
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.96 E-value=4.3e-09 Score=98.72 Aligned_cols=146 Identities=10% Similarity=-0.074 Sum_probs=107.8
Q ss_pred hhhhhhhccccccccccccchhhHHHHH-HHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhc------cchhHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFT-VTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGS------SFDFWS 87 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~------~~~~~~ 87 (462)
.|.+..+ .+.++.+.+. ...... ...+++.++.|++ ||+|+|+.+..+..+.++..+.... .++...
T Consensus 231 ~~~~l~~---~G~s~~~ig~--~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (390)
T TIGR02718 231 SKLYLVD---AGWPLEWIGR--LGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAV 305 (390)
T ss_pred hhHHHHh---cCCCHHHHHH--HHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHH
Confidence 4445554 5777777655 666654 4666778899999 9999999988877665333322221 233444
Q ss_pred HHHHHHHhhcccccccccccchhcccCCC-CCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHH
Q 012500 88 IAICRMLVGVGEASFISLAAPFIDDNAPV-PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAV 166 (462)
Q Consensus 88 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~ 166 (462)
++....+.+++.+...+...+.+.+..++ +++++.++..+...++|..+||.++|.+.++.||+..|++.+++.++..+
T Consensus 306 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 306 AWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 45555666777777777777787777775 78999999999999999999999999999999999999988776655433
No 209
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.95 E-value=2.3e-08 Score=89.40 Aligned_cols=170 Identities=16% Similarity=0.139 Sum_probs=115.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHH
Q 012500 245 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 323 (462)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 323 (462)
++++...++..........+....+ .+.+.+++++.+. .+.+++.+.+.+.++..|.+.||+|.| ++...+.+
T Consensus 14 ~~L~~S~~af~v~F~VW~l~s~l~~-~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR-----~~~~~s~~ 87 (417)
T COG2223 14 RNLWLSTLAFDVGFMVWTLFSPLGV-FIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGR-----KWTILSML 87 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-hhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCch-----HHHHHHHH
Confidence 4445444443333333333333333 4457799998777 556888999999999999999999999 78877777
Q ss_pred HHHHHHHHHHHhhhhH---HHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHh
Q 012500 324 LGAISCLTAFCLSSLY---GFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 400 (462)
Q Consensus 324 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~ 400 (462)
+..+-++........+ ..+++-.+.|+ .+..+......++..+|||++|.++|++. ..|. |..+...+.+.+..
T Consensus 88 l~~IP~~~~~~a~~~~~~~~ll~~gll~G~-~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~-G~av~q~~~P~v~~ 164 (417)
T COG2223 88 LLLIPCLGLAFAVTYPSTWQLLVIGLLLGL-AGASFAVGMPNASFFFPKEKQGLALGIAG-AGNL-GVAVAQLVAPLVAV 164 (417)
T ss_pred HHHHHHHHHHHHccCCchHHHHHHHHHHhc-ccceehcccccccccCChhhhhHHHHHhc-cccc-cHHHHHHHHHHHHH
Confidence 7666665555443332 44444444333 33556667788889999999999999994 6665 88889988888888
Q ss_pred hhcc--hhHHHHHHHHHHHHHHHHH
Q 012500 401 HVNN--WRKTTLALTSIFFLAAGIW 423 (462)
Q Consensus 401 ~~g~--~~~~~~~~~~~~~~~~~~~ 423 (462)
..|. |+....+.....++..+..
T Consensus 165 ~~g~~~w~~~~~i~~~~l~v~~v~~ 189 (417)
T COG2223 165 AFGFLAWRNVAGIYVVALAIAAVLA 189 (417)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 7773 6666666665555544433
No 210
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.94 E-value=6e-09 Score=82.08 Aligned_cols=125 Identities=17% Similarity=0.216 Sum_probs=94.4
Q ss_pred hHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccC
Q 012500 288 VTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSV 367 (462)
Q Consensus 288 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (462)
...++..++.+..+++.||++|| +.+.................++.+.......+.+++.+...+.......+..
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 80 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRK-----PVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIY 80 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchh-----HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHC
Confidence 34667788899999999999998 7766666655555555555566666777777788887777777788888999
Q ss_pred CcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHHHHH
Q 012500 368 KPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLA 419 (462)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 419 (462)
|+++|+++.++.+...+. |..++|.+.+.+.+..+ ++..+.......+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 130 (141)
T TIGR00880 81 PPEERGVALGLMSAGIAL-GPLLGPPLGGVLAQFLG-WRAPFLFLAILALAA 130 (141)
T ss_pred ChhhhhHHHHHHHHhHHH-HHHHhHHhHHHHhcccc-hHHHHHHHHHHHHHH
Confidence 999999999999766555 89999999999988755 656666555444433
No 211
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.94 E-value=2.3e-09 Score=102.34 Aligned_cols=115 Identities=15% Similarity=0.035 Sum_probs=99.1
Q ss_pred hhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhcc-chhHHHHHHHHHhhcccccccccccchhccc
Q 012500 36 SVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSS-FDFWSIAICRMLVGVGEASFISLAAPFIDDN 113 (462)
Q Consensus 36 s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~ 113 (462)
++......++.+++.++.+++ ||+|+|+++..+.++.+++.+...+. ++.+.+++..++.|++.+...+...++++|.
T Consensus 260 ~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (437)
T TIGR00792 260 SYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADT 339 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 446777889999999999999 99999999999998888887777665 4667778888899999998888889999988
Q ss_pred CC-------CCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccch
Q 012500 114 AP-------VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 150 (462)
Q Consensus 114 ~~-------~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gw 150 (462)
.| ++++|.+.++.+....+|..+++.+.+.+.+..||
T Consensus 340 ~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 340 VDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred hhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 65 45689999999999999999999999999876665
No 212
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.93 E-value=6.8e-09 Score=93.42 Aligned_cols=139 Identities=10% Similarity=-0.003 Sum_probs=110.9
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRML 94 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 94 (462)
.+.++.+...++.++.+.+. ..+.+..+..++....+++ ||+|+|+++..+..+..++.++....++...+ .+-++
T Consensus 163 ~~~yl~~~~~~g~s~~~a~~--~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~-~~~~l 239 (310)
T TIGR01272 163 LVNFLSDPHALGLPEDQAAH--FTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM-WFVLA 239 (310)
T ss_pred HHHHHHhcccCCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHH
Confidence 67777654446777777555 8999999999999999999 99999999998888888877666665554333 35558
Q ss_pred hhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHH
Q 012500 95 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAI 159 (462)
Q Consensus 95 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~ 159 (462)
.|++.+..+|...+...+..|+ +.+++.++. ....+|..++|++.|.+.|..|.+..|++..+
T Consensus 240 ~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~ 302 (310)
T TIGR01272 240 LGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVP 302 (310)
T ss_pred HHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHH
Confidence 8999999999999999998874 456667775 45668999999999999999999999886544
No 213
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.93 E-value=2.7e-08 Score=93.76 Aligned_cols=158 Identities=14% Similarity=0.055 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhCCCcchhhhhhhHHHhhhhhhhhhhHHHhhh-----ccccccchhHHHHHHHHHHHH
Q 012500 254 YIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQM-----GATISNAFKLLSAATFLGAIS 328 (462)
Q Consensus 254 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----~~~~~~~~~~~~~~~~~~~~~ 328 (462)
++...........-+|.|+++. |.+..+..+....... .+..++.|+++||+ |||+ +++..+....+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~~-g~~~~~ig~~~~~~~~-~~~~~l~g~~~Dr~~~~~~g~rr----~~l~~~~~~~~l~ 81 (402)
T PRK11902 8 GFASGLPLALTSGTLQAWMTVE-GLDIQTIGFFSLVGQA-YIFKFLWAPLMDRYTPPLLGRRR----GWLLLTQVGLAAS 81 (402)
T ss_pred HHHHhhhHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCcch----hHHHHHHHHHHHH
Confidence 5556666667778899999985 7776666433333332 57789999999999 6651 4565555555444
Q ss_pred HHHHHHh---hhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcch
Q 012500 329 CLTAFCL---SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNW 405 (462)
Q Consensus 329 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~ 405 (462)
....... .+.+......++.+++.....++..+++.+..|+++|+++.++....... |..+++.+.+.+.+...+|
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~-g~i~g~~l~~~l~~~~~gw 160 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRL-AMLVSGGLALWLADRVLGW 160 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHH-HHHHHhHHHHHHHhcccCH
Confidence 4443333 23444444444555666666677788889999999999999999655454 8888888888888865458
Q ss_pred hHHHHHHHHHHHH
Q 012500 406 RKTTLALTSIFFL 418 (462)
Q Consensus 406 ~~~~~~~~~~~~~ 418 (462)
+..+++.+...+.
T Consensus 161 ~~~f~i~a~~~l~ 173 (402)
T PRK11902 161 GNTYLLMAGLMLA 173 (402)
T ss_pred HHHHHHHHHHHHH
Confidence 8888777665443
No 214
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.92 E-value=2.9e-08 Score=94.90 Aligned_cols=153 Identities=15% Similarity=0.103 Sum_probs=110.7
Q ss_pred HHhhHHHHHHhCCCcchhhhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 012500 266 YWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALF 345 (462)
Q Consensus 266 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (462)
..++....+ .|.++....+.....++..+..++.|+++|.+||| ..++.+.++..+........++....+...
T Consensus 65 ~~l~~I~~d-iG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr-----~~~i~g~~l~vvG~Iv~atA~~~~~~iag~ 138 (599)
T PF06609_consen 65 SILPYINAD-IGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRR-----YFFIIGSLLGVVGSIVCATAQNMNTFIAGM 138 (599)
T ss_pred HHHHHHHHh-cCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcch-----HHHHHHHHHHHhHHHHhhcCCcHHHHHHHH
Confidence 334544444 44455455566667778888889999999999999 888899899888888888888888889999
Q ss_pred HHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHH
Q 012500 346 TVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFV 425 (462)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 425 (462)
.+.+++.+.... ....+.|..|.+.|..+.++.. .........+|.+...+..+ ++|++.+++..+...++.+..++
T Consensus 139 ~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~-~~~i~~~~~~~~ia~~~~~~-~~WRw~~~~~~i~~~i~~vl~~~ 215 (599)
T PF06609_consen 139 VLYGVGAGVQEL-AALAISELVPNKWRGLGLAIAS-IPFIITTWISPLIAQLFAAH-SGWRWIFYIFIIWSGIALVLIFF 215 (599)
T ss_pred HHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHH-HHHHhhhcccHHHHHHhccC-CCcchHHHHHHHHHHHHHHHHHH
Confidence 998887665443 3445788888899988887764 33443555677666555443 56999998887766655555444
Q ss_pred HH
Q 012500 426 GI 427 (462)
Q Consensus 426 ~~ 427 (462)
+.
T Consensus 216 fY 217 (599)
T PF06609_consen 216 FY 217 (599)
T ss_pred Hh
Confidence 33
No 215
>PRK10133 L-fucose transporter; Provisional
Probab=98.92 E-value=4.9e-08 Score=92.63 Aligned_cols=145 Identities=9% Similarity=0.029 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHH
Q 012500 248 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 326 (462)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 326 (462)
....+..+...+.........|.+ ++.++.++.+. ...+...++..++.+..|++.||+||| +.+..+..+..
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r-----~~l~~g~~~~~ 102 (438)
T PRK10133 29 ALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYK-----AGIITGLFLYA 102 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHHHHHH
Confidence 334444555556666667778876 77788887666 444778889999999999999999999 88877777666
Q ss_pred HHHHHH---HHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHH
Q 012500 327 ISCLTA---FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 399 (462)
Q Consensus 327 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~ 399 (462)
...++. ...++.+..++..++.|++.+...+..+..+.+..+++++....+..+..... |..++|.+.+.+.
T Consensus 103 ~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~-G~~~g~~~g~~l~ 177 (438)
T PRK10133 103 LGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSF-GAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 665543 23456777777888888888888888888777655455666678887555554 8888887766544
No 216
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.90 E-value=6.7e-09 Score=111.09 Aligned_cols=149 Identities=13% Similarity=0.025 Sum_probs=119.6
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhcc------------
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSS------------ 82 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~------------ 82 (462)
+|.+..+. ++.++.+.+. +.+.+.++.++++++.|++ ||.++++.+..+.++.+++.+..++.
T Consensus 248 ~p~~~~~~--~g~~~~~~g~--~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 323 (1140)
T PRK06814 248 LPLLAKET--LGGDENVATL--FLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLK 323 (1140)
T ss_pred hHHHHHHH--cCCchHHHHH--HHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhccccccccccccc
Confidence 67676654 5667776555 9999999999999999999 98888887777766666666544443
Q ss_pred --------chhHHHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhc-ccchHHH
Q 012500 83 --------FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-HLNWRYA 153 (462)
Q Consensus 83 --------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-~~gwr~~ 153 (462)
++.+.++++-++.|++.+...+...+++.+.+|+++||+++|..+....+|..+++++.+.+.+ ..++...
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~ 403 (1140)
T PRK06814 324 SILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWI 403 (1140)
T ss_pred chhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHH
Confidence 6778888899999999999999999999999999999999999999999999999999988873 4567777
Q ss_pred HHHHHHHHHHHHHHH
Q 012500 154 FWGEAILMLPFAVLA 168 (462)
Q Consensus 154 f~~~~~~~~~~~~~~ 168 (462)
+++.+++.++.....
T Consensus 404 ~~~~~~~~~~~~~~~ 418 (1140)
T PRK06814 404 ILFIALANLIVAILI 418 (1140)
T ss_pred HHHHHHHHHHHHHHH
Confidence 776666544444333
No 217
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.89 E-value=1.7e-08 Score=93.63 Aligned_cols=153 Identities=16% Similarity=0.117 Sum_probs=118.2
Q ss_pred hhhhhhhccccc-cccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhcc-chhHHHHH--
Q 012500 16 LKRSMKKKKFLS-LRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSS-FDFWSIAI-- 90 (462)
Q Consensus 16 ~p~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~-- 90 (462)
.+.++++ .+ .+....+. ..+...++-++.-...+++ .|+|.|+++.++.+.+++=..+.+.. ++.+...+
T Consensus 230 ~~~yl~~---~gg~~~~~~g~--~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~ 304 (400)
T PF03825_consen 230 FSIYLQE---LGGYSGSTIGI--LWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQ 304 (400)
T ss_pred HHHHHHH---cccchhhHHHH--HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 3445555 34 33333333 5566667777888899999 99999999999999999999998887 55444333
Q ss_pred --HHHHhhcccccccccccchhcccCCCCCchhHHHHHHhh-hhhhhhhhhhHHHHhhcccc------hHHHHHHHHHHH
Q 012500 91 --CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMC-IPTGVALGYVYGGVVGSHLN------WRYAFWGEAILM 161 (462)
Q Consensus 91 --~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~G~~~g~~~~~~l~~~~g------wr~~f~~~~~~~ 161 (462)
...++|+..+..+.++..++.+..|++.|+++.+++... .++|..+|..++|++.+++| |...+.+.+++.
T Consensus 305 ~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~ 384 (400)
T PF03825_consen 305 LLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMA 384 (400)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHH
Confidence 355799999999999999999999999999999998764 68999999999999998765 555666666666
Q ss_pred HHHHHHHhhccc
Q 012500 162 LPFAVLAFVIKP 173 (462)
Q Consensus 162 ~~~~~~~~~~~p 173 (462)
++..++.+++.+
T Consensus 385 ~~~~~~f~~~fk 396 (400)
T PF03825_consen 385 LVILVLFVILFK 396 (400)
T ss_pred HHHHHHHHhhcc
Confidence 666665555543
No 218
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.88 E-value=2e-08 Score=95.50 Aligned_cols=150 Identities=6% Similarity=-0.053 Sum_probs=91.5
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhh----hccchhHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGC----GSSFDFWSIAI 90 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~----~~~~~~~~l~~ 90 (462)
+|.++.++ .+.+..+.+. ..+...++..+++++.|++ ||+|||+++..+.++.++..... ...++....+.
T Consensus 266 lp~~l~~~--~g~s~~~~~~--~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (432)
T PRK10406 266 MQKYLVNT--AGMHANVASG--IMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFG 341 (432)
T ss_pred HHHHHHHh--cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 67776554 4555555444 6667677778888999999 99999998877665543333211 11223332222
Q ss_pred HHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhh-hhhhhhhHHHHhhcccc-hHHHHHHHHHHHHHHHHHH
Q 012500 91 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPT-GVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLA 168 (462)
Q Consensus 91 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~~~~~~~ 168 (462)
.-.+.++..+...+....++.|++|++.|+.++|+.+...++ .....|.+.+.+ +..| |...++..++..++..+..
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~ 420 (432)
T PRK10406 342 LVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVS 420 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHH
Confidence 222222333333445667889999999999999998766554 234477777755 4445 5556665555555554444
Q ss_pred hh
Q 012500 169 FV 170 (462)
Q Consensus 169 ~~ 170 (462)
++
T Consensus 421 ~~ 422 (432)
T PRK10406 421 LM 422 (432)
T ss_pred HH
Confidence 44
No 219
>PTZ00207 hypothetical protein; Provisional
Probab=98.88 E-value=6.1e-08 Score=93.31 Aligned_cols=152 Identities=16% Similarity=0.088 Sum_probs=94.6
Q ss_pred HHHHHHHhhHHHHHHhCCCcchhhh-hhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHh----
Q 012500 261 IGAYSYWGPKAGYNIYHMSNADMMF-GGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL---- 335 (462)
Q Consensus 261 ~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 335 (462)
.+.+..+.|. +++.+|.+..+... ..+.. ......++.|++.||+|+| +.+..+.++..+..++....
T Consensus 43 ~y~fsv~s~~-L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R-----~vllig~ll~~iG~ll~ala~~~~ 115 (591)
T PTZ00207 43 MYAFNLISGA-MQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPR-----PIFVLSMTVFCLGTLLFALTFQEV 115 (591)
T ss_pred HHHHHHHHHH-HHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHHhccc
Confidence 3455555564 56678888655532 23222 2234556789999999999 88877777766666555543
Q ss_pred --hhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhcccc-chhHHHHHHhhhcchhHHHHHH
Q 012500 336 --SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVP-SSPLVGVLQDHVNNWRKTTLAL 412 (462)
Q Consensus 336 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~g~l~~~~g~~~~~~~~~ 412 (462)
++.+.+.+..++.+.+.+...+.....+.+.+ |++||.+.|+.....+. |+++ ++...+++.+ ++...+++.
T Consensus 116 i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~F-p~~RG~a~Gi~~~~~gL-GsaI~~~l~~~l~~~---~~~~~fl~l 190 (591)
T PTZ00207 116 IEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVF-PSNRGAVVAIMKTFTGL-GSAILGSIQLAFFSD---NTSAYFFFL 190 (591)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hhhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHH---hHHHHHHHH
Confidence 35666666666777776655555555666665 57899999999777766 6654 5544454443 354555555
Q ss_pred HHHHHHHHHHHH
Q 012500 413 TSIFFLAAGIWF 424 (462)
Q Consensus 413 ~~~~~~~~~~~~ 424 (462)
+...++..++..
T Consensus 191 ~vl~~vv~ll~~ 202 (591)
T PTZ00207 191 MSFALVVGILAI 202 (591)
T ss_pred HHHHHHHHHHHH
Confidence 555444444333
No 220
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.85 E-value=3.3e-08 Score=84.21 Aligned_cols=143 Identities=8% Similarity=0.013 Sum_probs=109.6
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhcc-------chhHHHHHHHHHhhc
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSS-------FDFWSIAICRMLVGV 97 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~-------~~~~~l~~~r~l~G~ 97 (462)
++.|++|... +.+.-.+|..+ +++.|.+ ||+|++.++.+|.+...+|..+.-.+ .++|.+.+..++.|.
T Consensus 32 l~~sq~~l~~--l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~ 108 (250)
T PF06813_consen 32 LGYSQSQLNT--LSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGN 108 (250)
T ss_pred hCCCHHHHHH--HHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcc
Confidence 7888888666 88999999876 6889999 99999999999999999988776543 467888888899999
Q ss_pred ccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhcc
Q 012500 98 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 172 (462)
Q Consensus 98 ~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 172 (462)
+.+...+++.....+.|| ++||++.|+.-...+++..+-..+...+.+.-.-+..+........+..+..++..
T Consensus 109 s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~vr 182 (250)
T PF06813_consen 109 SSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFVR 182 (250)
T ss_pred cHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhhee
Confidence 888777777777778998 68999999999999998877776666555543344444444444444444444443
No 221
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.84 E-value=2.1e-08 Score=98.99 Aligned_cols=126 Identities=8% Similarity=-0.056 Sum_probs=93.2
Q ss_pred HHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhh-------------
Q 012500 271 AGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS------------- 336 (462)
Q Consensus 271 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 336 (462)
-+++.++.+..+. .+.+...++..++.++.+++.||.+|+ +++..+.++.++..++....+
T Consensus 58 ~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~-----~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~ 132 (633)
T TIGR00805 58 TIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRP-----IVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVS 132 (633)
T ss_pred hhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcc-----eEEEecHHHHHHHHHHHhChHHhcCCcccccccc
Confidence 4566688886665 455788899999999999999999998 666666655555544433221
Q ss_pred --------------------------------------hhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHH
Q 012500 337 --------------------------------------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAI 378 (462)
Q Consensus 337 --------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (462)
....+++.-++.|++.+..++....++.|.+|+++|+...++
T Consensus 133 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i 212 (633)
T TIGR00805 133 STGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGI 212 (633)
T ss_pred ccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHH
Confidence 112334556677777777778888899999999999999999
Q ss_pred HHHHHhhhccccchhHHHHHHhhh
Q 012500 379 STVSIHIFGDVPSSPLVGVLQDHV 402 (462)
Q Consensus 379 ~~~~~~~~g~~~~~~~~g~l~~~~ 402 (462)
.+..... |..+|+.+++++.+..
T Consensus 213 ~~~~~~i-G~~lG~llgg~l~~~~ 235 (633)
T TIGR00805 213 LESIAVF-GPAFGYLLGSFCLQIY 235 (633)
T ss_pred HHHHHHh-hhHHHHHHHHHHHhcc
Confidence 9655554 9999999999888653
No 222
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.83 E-value=1.2e-07 Score=89.33 Aligned_cols=142 Identities=13% Similarity=0.019 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhh----hccccccchhHHHH-HHH
Q 012500 250 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ----MGATISNAFKLLSA-ATF 323 (462)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~----~~~~~~~~~~~~~~-~~~ 323 (462)
.....+...+.+.....+++.|+++ .|.++... .......+.+++..++.|+++|| +||| +..+. +..
T Consensus 9 ~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRR-----rp~il~g~~ 82 (477)
T TIGR01301 9 VASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRR-----RPFIAAGAA 82 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCCh-----HHHHHHHHH
Confidence 3333445556666666777777755 67776544 44466778889999999999995 8887 54444 344
Q ss_pred HHHHHHHHHHHhhhh-----------------HHHHHHHHHHHHHHHhccccceeeeeccCCcchh--hHHHHHHHHHHh
Q 012500 324 LGAISCLTAFCLSSL-----------------YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLR--ALSMAISTVSIH 384 (462)
Q Consensus 324 ~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 384 (462)
.......++....+. +..+..+.+..+......++..+++.|..|+++| +.+.++.+...+
T Consensus 83 ~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~ 162 (477)
T TIGR01301 83 LVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMA 162 (477)
T ss_pred HHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHH
Confidence 444443443332221 2223334445566677788889999999998754 578888866666
Q ss_pred hhccccchhHHHHH
Q 012500 385 IFGDVPSSPLVGVL 398 (462)
Q Consensus 385 ~~g~~~~~~~~g~l 398 (462)
. |+.+++.+.+..
T Consensus 163 l-G~ilg~~~g~~~ 175 (477)
T TIGR01301 163 I-GNVLGYAAGAYS 175 (477)
T ss_pred H-HHHHHHHHHHHH
Confidence 6 999998777654
No 223
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.81 E-value=1.1e-08 Score=91.36 Aligned_cols=133 Identities=12% Similarity=0.049 Sum_probs=118.7
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccc
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS 104 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 104 (462)
++.++.+... +.....+..++++.+.|++ ||+|.|+++..++++..+.++..-+...-..+.++-.+.|...|+.+.
T Consensus 283 ~gls~~~lll--~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA 360 (438)
T COG2270 283 LGLSSTELLL--IGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQA 360 (438)
T ss_pred cCccHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHH
Confidence 7888888776 8888889999999999999 999999999999999999999888888888888888999999999999
Q ss_pred cccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccc-hHHHHHHHHHH
Q 012500 105 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAIL 160 (462)
Q Consensus 105 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f~~~~~~ 160 (462)
.+.++.++.+|++|-++.+|++......+..+||.+-+.+.+..| -|..+....++
T Consensus 361 ~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vl 417 (438)
T COG2270 361 SSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVL 417 (438)
T ss_pred HHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHH
Confidence 999999999999999999999999999999999999998887554 56555555443
No 224
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.80 E-value=2.9e-08 Score=87.66 Aligned_cols=134 Identities=13% Similarity=0.104 Sum_probs=112.1
Q ss_pred hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeee
Q 012500 284 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVC 363 (462)
Q Consensus 284 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (462)
.+.....+..++.+++.|.+.||+|+| ..++.+..+......+..+..+.+..++.=.+-+.+..+......++.
T Consensus 110 ~LFaskA~~qllvnp~~G~l~~~iGy~-----ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglaml 184 (464)
T KOG3764|consen 110 LLFASKALVQLLVNPFFGNLIDRIGYK-----IPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAML 184 (464)
T ss_pred HHHHHHHHHHHHhcccchhhHHHhccc-----cHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHH
Confidence 344667888999999999999999999 777888888877777777777888777788888999988888889999
Q ss_pred eccCCcc-hhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHHHHHHHHHH
Q 012500 364 LHSVKPS-LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 424 (462)
Q Consensus 364 ~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 424 (462)
.+.+|++ +|++++|+.-.+... |-.+||+++|.++|..| +..+|.+++++++.-..+.+
T Consensus 185 Ad~f~~d~er~~vmGialgfisl-G~lvgPpfGGilYe~~G-k~aPFlVL~~v~Lld~~L~l 244 (464)
T KOG3764|consen 185 ADVFPEDNERGSVMGIALGFISL-GVLVGPPFGGILYEFAG-KSAPFLVLAIVLLLDGALQL 244 (464)
T ss_pred HHHcccchhhhHHHHHHHHHHhc-cceecCCcccchHhhcC-CcCcHHHHHHHHHHHHHHHH
Confidence 9999985 689999999555554 99999999999999987 77889988888777665554
No 225
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.80 E-value=1.1e-07 Score=88.08 Aligned_cols=141 Identities=12% Similarity=0.102 Sum_probs=97.4
Q ss_pred HHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 012500 266 YWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLAL 344 (462)
Q Consensus 266 ~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (462)
..+|.+ .+.+|.++... ...+...++..++.++.|++.||+|+| +.+..+..+........ ..++.+..+..
T Consensus 21 ~~lp~l-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~~~~-~~~~~~~l~~~ 93 (355)
T TIGR00896 21 PLLPQI-RSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEE-----RSVAAGLLLIAAGILIR-SAPGTALLFAG 93 (355)
T ss_pred ccHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCch-----HHHHHHHHHHHHHHHHH-HhccHHHHHHH
Confidence 445554 44578886665 455788899999999999999999998 77666555544444333 44555555566
Q ss_pred HHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcc-hhHHHHHHHHH
Q 012500 345 FTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN-WRKTTLALTSI 415 (462)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~-~~~~~~~~~~~ 415 (462)
.++.+++.+...+.......+.. +++|+++.++.+...+. |..+++.+.+.+.+..+. |+..+...++.
T Consensus 94 ~~~~g~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~ 163 (355)
T TIGR00896 94 TALIGVGIAIINVLLPSLIKRDF-PQRVGLMTGLYSMALMG-GAALAAAATVPLAQHSGGHWQQALAWWALP 163 (355)
T ss_pred HHHHHHHHHHHhccchHHHHHhC-cchhhHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 66667776665555555555555 56899999999766555 888899888888876543 66666555443
No 226
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.79 E-value=1.5e-08 Score=96.56 Aligned_cols=151 Identities=17% Similarity=0.134 Sum_probs=132.1
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccC--CchhHHHHHHHHHHHHHhhhccchhHHHHHHH
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHN--PFRLIGVGLSVWTFATAGCGSSFDFWSIAICR 92 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r 92 (462)
+|.+... .+.++.+... +.+...+...++.+..|.+ |+.. ++.+..++++..+++.+.+++.++++.++..-
T Consensus 321 l~~~~~~---~g~~~~~aa~--l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~ 395 (509)
T KOG2504|consen 321 LPSYAKS---LGLSSNDAAF--LLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFS 395 (509)
T ss_pred HHHHHhh---cCCChhhhHH--HHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 4444443 6777777656 9999999999999999999 9988 45567888999999999999999999999999
Q ss_pred HHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccc-hHHHHHHHHHHHHHHHHHHhhc
Q 012500 93 MLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFVI 171 (462)
Q Consensus 93 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~ 171 (462)
.+.|+..|........++.|..+.++-..+.|+.....+++.++||++++.+.|..| |...|+..++..++...++++.
T Consensus 396 ~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~ 475 (509)
T KOG2504|consen 396 ILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLIL 475 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHh
Confidence 999999998888888899999999999999999999999999999999999998887 9999999999877776655544
No 227
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.79 E-value=2.1e-08 Score=91.99 Aligned_cols=144 Identities=17% Similarity=0.090 Sum_probs=127.8
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccc
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS 104 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 104 (462)
.+..++-.| ........|-++.-++++++ .|+|+-+++..++.+..+=.+..+..+|.|+.+-..+++|+..+..+.
T Consensus 401 ~~~~~~LfG--v~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWa 478 (618)
T KOG3762|consen 401 LGGIKTLFG--VVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWA 478 (618)
T ss_pred cCCcceeee--ehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHH
Confidence 444444444 47778888888899999999 999999999999999999999999999999999999999999999999
Q ss_pred cccchhcccCCCCCchhHHHHHHhh-hhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhc
Q 012500 105 LAAPFIDDNAPVPQKTAWLSMFYMC-IPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 171 (462)
Q Consensus 105 ~~~~~i~~~~~~~~r~~~~~~~~~~-~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 171 (462)
+..+|+++..||+-|..+.++.+.. .++|--+|.++||.+.+.+|=|..|.+.++.+++.+++...+
T Consensus 479 a~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 479 AIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred HHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998665 678999999999999999999999999999887776655544
No 228
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.77 E-value=4.2e-08 Score=89.81 Aligned_cols=180 Identities=12% Similarity=0.054 Sum_probs=133.2
Q ss_pred Hhh-hhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhC----CCcchh-hhhhhHHHhhhhhhhhhhHHHhhh-cccccc
Q 012500 241 LLQ-EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYH----MSNADM-MFGGVTIVCGIVGTISGGFILDQM-GATISN 313 (462)
Q Consensus 241 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~ 313 (462)
.++ .|.++.+...-+.--+.++++-..+..|+....+ +++.++ .+...+...--...+++||++||+ |+|
T Consensus 16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~--- 92 (498)
T COG3104 16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTR--- 92 (498)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchh---
Confidence 344 3455666666677788888888888888888777 775444 333333333344678899999995 777
Q ss_pred chhHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHhccccceeeeeccCCcc--hhhHHHHHHHHHHhhhccc
Q 012500 314 AFKLLSAATFLGAISCLTAFCLS--SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS--LRALSMAISTVSIHIFGDV 389 (462)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~ 389 (462)
+.+..+.++.++..+.+...+ .....++.+.+...+.|..-+....+..+.+|++ +|-.+.++.++..|. |+.
T Consensus 93 --~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNi-Gsl 169 (498)
T COG3104 93 --RTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINI-GSL 169 (498)
T ss_pred --HHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeeh-HHH
Confidence 778777777777777666653 5666777777777888888888888889988873 567777887777787 999
Q ss_pred cchhHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHH
Q 012500 390 PSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGI 427 (462)
Q Consensus 390 ~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 427 (462)
++|.+.+++.++.| |...|-..++....+.+.++..+
T Consensus 170 ~~p~i~~~~~~~~g-~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 170 IAPIITGLLAINYG-WHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred HHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999987 88888888877777776666544
No 229
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.76 E-value=2.5e-07 Score=83.43 Aligned_cols=118 Identities=18% Similarity=0.122 Sum_probs=84.0
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-c----ccCCchhHHH-HHHHHHHHHHhhhccchhH-------------
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-C----SHNPFRLIGV-GLSVWTFATAGCGSSFDFW------------- 86 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-d----r~Grr~~l~~-~~~~~~~~~~~~~~~~~~~------------- 86 (462)
++.++.-... +-..-.+...+.+|+.|.. | ||||||.++. +.++..++.++..++.++.
T Consensus 62 lGvphk~~S~--iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~ 139 (498)
T KOG0637|consen 62 LGVPHKWSSI--IWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKP 139 (498)
T ss_pred cCCCcccccc--cccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccch
Confidence 5666555333 4455555566677777776 6 6899987654 5666677777777775433
Q ss_pred ----HHHHHHHHhhcccccccccccchhcccCCCCCchh-HHHHHHhhhhhhhhhhhhHHHHhh
Q 012500 87 ----SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTA-WLSMFYMCIPTGVALGYVYGGVVG 145 (462)
Q Consensus 87 ----~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~G~~~g~~~~~~l~ 145 (462)
.++++--+.-++.-.....+-+++.|...++++.+ +++.+.....+|.++|...++++.
T Consensus 140 rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~~ 203 (498)
T KOG0637|consen 140 RAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYLG 203 (498)
T ss_pred HHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccccC
Confidence 34444445555666777788999999998777766 999999999999999999887543
No 230
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.76 E-value=5.2e-08 Score=81.17 Aligned_cols=305 Identities=11% Similarity=0.062 Sum_probs=156.5
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccc
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS 104 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 104 (462)
++....+.+. +...-.-...+.+.+.|.+ ||-|||+.-+.-++.+.+++ +.-.++.|-.++++|.+.|++.+..+.
T Consensus 67 YgFgkG~Igq--LfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmVGR~LGGiaTsLLFS 143 (454)
T KOG4332|consen 67 YGFGKGDIGQ--LFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMVGRVLGGIATSLLFS 143 (454)
T ss_pred cCccCCccce--eeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEeehhhhhhHHHHHHHH
Confidence 4555556555 5555555566777888899 99999996554444444433 234578899999999999999998887
Q ss_pred cccch-hcccCCCCCchhHHHHH----Hhhhhhhh----hhhhhHHHHhhcccc--hHHHHHHHHHHHHHHHHHHhhccc
Q 012500 105 LAAPF-IDDNAPVPQKTAWLSMF----YMCIPTGV----ALGYVYGGVVGSHLN--WRYAFWGEAILMLPFAVLAFVIKP 173 (462)
Q Consensus 105 ~~~~~-i~~~~~~~~r~~~~~~~----~~~~~~G~----~~g~~~~~~l~~~~g--wr~~f~~~~~~~~~~~~~~~~~~p 173 (462)
+-.++ +.|..+ +|+.-.-+. .-+.-.|. +++.+.+..+.+.++ --.+|-..+.+..+... . .+.
T Consensus 144 aFEsWliaEHne--kr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmA--v-il~ 218 (454)
T KOG4332|consen 144 AFESWLIAEHNE--KRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMA--V-ILS 218 (454)
T ss_pred HHHHHHHHHhhh--ccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHH--H-HHh
Confidence 77664 566653 343222221 11222333 333444444544432 23344333322111111 1 112
Q ss_pred cccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHH
Q 012500 174 LQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLG 253 (462)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (462)
.+.....++.+.+.. ........+.+..++++..+-..
T Consensus 219 ~W~ENygdps~~kdl------------------------------------------ltqf~gaa~aiaSD~ki~LLG~i 256 (454)
T KOG4332|consen 219 SWSENYGDPSENKDL------------------------------------------LTQFKGAARAIASDEKIALLGAI 256 (454)
T ss_pred hhhhccCChhhhHHH------------------------------------------HHHhhHhHHHHhcchHHHHHHHH
Confidence 222222122211110 00111123344445544433322
Q ss_pred HH-HHHHHHHHHHHHhhHHHHHHhCCCcchhhhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHH
Q 012500 254 YI-AYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA 332 (462)
Q Consensus 254 ~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (462)
.. +-...+..+..|.|..--+..+.+ .. .+.+.+.++.++|+-+..++..|-..+.- ..+.+...+....+.+.
T Consensus 257 qsLFE~smytFVFLWTPaLspn~e~iP-hG-fiFatFMlASmLGSSla~Rl~s~s~~~ve---~ymqivf~vs~a~l~Lp 331 (454)
T KOG4332|consen 257 QSLFEGSMYTFVFLWTPALSPNDEEIP-HG-FIFATFMLASMLGSSLASRLLSRSSPKVE---SYMQIVFLVSIAALLLP 331 (454)
T ss_pred HHHHhhhhheeeeeecccCCCCcccCC-ch-hHHHHHHHHHHHhhHHHHHHHhcCCcccc---hHHHHHHHHHHHHHHHH
Confidence 22 223333344456775543322222 12 22244556666777666666655443322 33333333333322222
Q ss_pred HHh-------hhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhh
Q 012500 333 FCL-------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 385 (462)
Q Consensus 333 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (462)
... .++....+.++++-.+.+..+|.+.-+-.+.+|.+.|++.+-....-.+.
T Consensus 332 ilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLni 391 (454)
T KOG4332|consen 332 ILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNI 391 (454)
T ss_pred HHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhH
Confidence 211 12334567777788888899999988888999999998776655443444
No 231
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.74 E-value=1.1e-07 Score=88.20 Aligned_cols=148 Identities=14% Similarity=-0.008 Sum_probs=94.2
Q ss_pred HHHHhhHHHHHHhCCCcchhhhhhhHHHhhhhhhhhhhHHHhhh-----ccccccchhHHHHHHHHHHHHHHHHHHh---
Q 012500 264 YSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQM-----GATISNAFKLLSAATFLGAISCLTAFCL--- 335 (462)
Q Consensus 264 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 335 (462)
.....|.+.++ .|.+..+..+.....+...+ .++.|+++||+ ||| +.++..+..............
T Consensus 7 ~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~-~~~~g~~~Dr~~~~~~Grr----~~~l~~~~~~~~~~~~~l~~~~~~ 80 (356)
T TIGR00901 7 VGNTLPYWLRS-KNVSLKTIGFFSLVGLPYSL-KFLWSPLVDTVYLPFFGRR----RSWLVLTQVLLLSLLLILSFLVPS 80 (356)
T ss_pred HHhHHHHHHHH-cCCCHHHHHHHHHHHHHHHH-HHHHHHHHhcccCCCCCcc----HHHHHHHHHHHHHHHHHHHcCCcc
Confidence 34456666665 57886665443323333343 88999999998 444 133444444444443333333
Q ss_pred hhhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcc-------hhHH
Q 012500 336 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN-------WRKT 408 (462)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~-------~~~~ 408 (462)
.+.+.......+.+.+.....++..+++.+..|+++|+.+.++.....+. |.++++.+.+.+.+..+. |+..
T Consensus 81 ~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~-G~~~~~~l~~~l~~~~g~~~~~~~~wr~~ 159 (356)
T TIGR00901 81 TDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRA-GMLLSGSLALVLASPEFANTGLITLWGYI 159 (356)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHH-HHHHHHHHHHHHhhhcccccccccccHHH
Confidence 23333444444455555556667778888999999999999999655555 999999999988887663 7777
Q ss_pred HHHHHHHHHH
Q 012500 409 TLALTSIFFL 418 (462)
Q Consensus 409 ~~~~~~~~~~ 418 (462)
+++.++..++
T Consensus 160 f~i~ai~~l~ 169 (356)
T TIGR00901 160 FFWTALLILP 169 (356)
T ss_pred HHHHHHHHHH
Confidence 7766665444
No 232
>PRK09848 glucuronide transporter; Provisional
Probab=98.71 E-value=2.2e-08 Score=95.79 Aligned_cols=112 Identities=9% Similarity=-0.027 Sum_probs=93.3
Q ss_pred hHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccc--hhHHHHHHHHHhhcccccccccccchhcccC
Q 012500 38 NVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEASFISLAAPFIDDNA 114 (462)
Q Consensus 38 ~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~ 114 (462)
......++.+++.++.+++ ||+|+|+++..+.++..++.+...+.+ +++.+++..++.|+|.+...+...++.+|..
T Consensus 269 ~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~ 348 (448)
T PRK09848 269 VLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTV 348 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3444467788899999999 999999999999998888887776654 6777777888999999999999999999888
Q ss_pred CCC-------CchhHHHHHHhhhhhhhhhhhhHHHHhhcccc
Q 012500 115 PVP-------QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN 149 (462)
Q Consensus 115 ~~~-------~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g 149 (462)
|.+ ++|...+..+....+|..+|+.+.+.+.+..|
T Consensus 349 ~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G 390 (448)
T PRK09848 349 EYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSG 390 (448)
T ss_pred hhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 754 45899999999999999999999888765444
No 233
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.70 E-value=2.2e-07 Score=87.58 Aligned_cols=145 Identities=19% Similarity=0.301 Sum_probs=115.5
Q ss_pred HhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHH
Q 012500 275 IYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS--SLYGFLALFTVGELL 351 (462)
Q Consensus 275 ~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 351 (462)
.+++++.+- .+.+....+.+++.+.+|++.||+|.| +.+..+.++.++..++..... +.+..++.=++.|++
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r-----~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~ 141 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGAR-----RVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLG 141 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCch-----HHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHH
Confidence 355554333 455778899999999999999999999 888888888877777666553 334556777788899
Q ss_pred HHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHH
Q 012500 352 VFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFV 425 (462)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 425 (462)
.+..++....+..+-.|+++|++..++....... |.+++-++.|.+.+...+|+..|++.+.+.++..++++.
T Consensus 142 ~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~-g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~ 214 (466)
T KOG2532|consen 142 QGVLFPAIGSILAKWAPPNERSTFIAILTAGSQL-GTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFL 214 (466)
T ss_pred HhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHH-HHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999655555 989898899999998445999999988887666555543
No 234
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.70 E-value=2.1e-07 Score=78.37 Aligned_cols=135 Identities=14% Similarity=0.042 Sum_probs=98.9
Q ss_pred hhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHH-HHHHhhhccchhHHHHHHHHH
Q 012500 17 KRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWT-FATAGCGSSFDFWSIAICRML 94 (462)
Q Consensus 17 p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~r~l 94 (462)
|...++. +++|+.+.+. +.+....-.++.+|+.|.+ ||+|++-+.+.+..+.. ++-....| +++.=+++..+
T Consensus 288 ~~fF~~r--fGlS~~~a~~--i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~ 361 (459)
T KOG4686|consen 288 PMFFQKR--FGLSAVSAGN--ILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTF 361 (459)
T ss_pred HHHHHHh--hCCChhhccc--hhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHH
Confidence 3333444 6788877666 7777677778889999999 99999998776554443 33333333 23334566777
Q ss_pred hhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccc---hHHHHHHH
Q 012500 95 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN---WRYAFWGE 157 (462)
Q Consensus 95 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g---wr~~f~~~ 157 (462)
.|+............++..+|+++.|++.+..+...++|..+.|.+++.+.++-| |--.|.+.
T Consensus 362 lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~ 427 (459)
T KOG4686|consen 362 LGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLI 427 (459)
T ss_pred HhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHH
Confidence 8887776555566778888899999999999999999999999999999998654 54444443
No 235
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.70 E-value=1.5e-07 Score=87.81 Aligned_cols=149 Identities=11% Similarity=-0.070 Sum_probs=114.0
Q ss_pred ccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccc---hhH------HHHHHHHHhh
Q 012500 27 SLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSF---DFW------SIAICRMLVG 96 (462)
Q Consensus 27 ~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~---~~~------~l~~~r~l~G 96 (462)
+.++.+..+ ...+..+...+....+..+ ||+|||+.++.+..+..+..+++.... +.. ..+++.++..
T Consensus 301 G~~~~~a~~--an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~ 378 (485)
T KOG0569|consen 301 GFTPEEAQY--ANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFI 378 (485)
T ss_pred CCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 555555334 7788888888999999999 999999999999999998888877542 111 1233444444
Q ss_pred ccccc-ccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccccc
Q 012500 97 VGEAS-FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 175 (462)
Q Consensus 97 ~~~g~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 175 (462)
++.+. ..|...-+.+|.+|++.|+.++++......++..+-...-..+.+..|= +.|++..+.++...+..++.+||+
T Consensus 379 ~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 379 ISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPET 457 (485)
T ss_pred HhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCccc
Confidence 33332 4667778899999999999999999999888888777776677666664 788888999999999999999997
Q ss_pred cCC
Q 012500 176 LKG 178 (462)
Q Consensus 176 ~~~ 178 (462)
+.+
T Consensus 458 kgr 460 (485)
T KOG0569|consen 458 KGR 460 (485)
T ss_pred CCC
Confidence 543
No 236
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.69 E-value=7.1e-08 Score=92.19 Aligned_cols=124 Identities=10% Similarity=-0.051 Sum_probs=106.7
Q ss_pred cccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhcc----------chhHHHHHHH
Q 012500 24 KFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSS----------FDFWSIAICR 92 (462)
Q Consensus 24 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~----------~~~~~l~~~r 92 (462)
..++.++.+.|. ......++.+++....+++ +|++.|+++.++.++.+++.+..... ++.+.++..-
T Consensus 281 ~~lG~s~~~~G~--~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~ 358 (468)
T TIGR00788 281 QCLPGGPSFSGM--SKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDS 358 (468)
T ss_pred ccCCCCcchhhh--HHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehh
Confidence 347788888776 7777889999999999999 99999999999999999988665321 3444556677
Q ss_pred HHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccc
Q 012500 93 MLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN 149 (462)
Q Consensus 93 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g 149 (462)
++.+++.+....+...++.+..|++++|...++.+...++|..+++.+++.+.++.|
T Consensus 359 ~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 359 IIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 888999999999999999999999999999999999999999999999999988766
No 237
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.69 E-value=1e-07 Score=86.45 Aligned_cols=129 Identities=19% Similarity=0.254 Sum_probs=108.3
Q ss_pred chhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccch--hHHHHHHHHHhhcccccccccccchhc
Q 012500 35 SSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFD--FWSIAICRMLVGVGEASFISLAAPFID 111 (462)
Q Consensus 35 ~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~~l~~~r~l~G~~~g~~~~~~~~~i~ 111 (462)
.++..+.+.++..++.++.|++ ||+|||+.+..+.....++.+..++..+ .+.+++.|+++|++.+...+...+++.
T Consensus 41 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 120 (338)
T COG0477 41 YGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLS 120 (338)
T ss_pred HHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3558899999999999999999 9999999888888776666777777776 899999999999999999999999999
Q ss_pred ccCCC-CCchhHHHHHHh-hhhhhhhhhhhHHHHhhcc--cchHHHHHHHHHHHHH
Q 012500 112 DNAPV-PQKTAWLSMFYM-CIPTGVALGYVYGGVVGSH--LNWRYAFWGEAILMLP 163 (462)
Q Consensus 112 ~~~~~-~~r~~~~~~~~~-~~~~G~~~g~~~~~~l~~~--~gwr~~f~~~~~~~~~ 163 (462)
|++|+ ++|+...+.... ...+|..+++.+++.+... .+||..|.+.......
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (338)
T COG0477 121 EWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLL 176 (338)
T ss_pred HhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 99997 688999999888 5888889998777776654 6799977777655433
No 238
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.61 E-value=6.1e-06 Score=81.23 Aligned_cols=144 Identities=15% Similarity=0.096 Sum_probs=108.2
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-c-ccCCchhHHHHHHHHHHHHHhhhccch--------hHHHHHHHHHh
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-C-SHNPFRLIGVGLSVWTFATAGCGSSFD--------FWSIAICRMLV 95 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-d-r~Grr~~l~~~~~~~~~~~~~~~~~~~--------~~~l~~~r~l~ 95 (462)
++.++++... +...+....-+...+.|.+ | ++||++.+.++.++..++..+.+++.. ....+++-.+.
T Consensus 18 lg~~~~~A~~--i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLi 95 (654)
T TIGR00926 18 LGFSESTSTV--LFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALI 95 (654)
T ss_pred cCCcHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHH
Confidence 4555554333 4445544445556666777 5 589999999999999999988876521 23356777888
Q ss_pred hcccccccccccchhcccCCCC---CchhHHHHHHhhhhhhhhhhhhHHHHhhcc-------cchHHHHHHHHHHHHHHH
Q 012500 96 GVGEASFISLAAPFIDDNAPVP---QKTAWLSMFYMCIPTGVALGYVYGGVVGSH-------LNWRYAFWGEAILMLPFA 165 (462)
Q Consensus 96 G~~~g~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-------~gwr~~f~~~~~~~~~~~ 165 (462)
.+|.|+.-|...+...|-++++ +|-..+.++..+.++|..+++.+..++.+. .+|...|.+.++..++..
T Consensus 96 a~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~ 175 (654)
T TIGR00926 96 ALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILAL 175 (654)
T ss_pred HhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHH
Confidence 8999999999999999999754 366788899999999999999999888743 369999999988777666
Q ss_pred HHHhhc
Q 012500 166 VLAFVI 171 (462)
Q Consensus 166 ~~~~~~ 171 (462)
++....
T Consensus 176 lvf~~g 181 (654)
T TIGR00926 176 IVFMAG 181 (654)
T ss_pred HHHHHh
Confidence 555443
No 239
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.59 E-value=1e-07 Score=83.32 Aligned_cols=124 Identities=6% Similarity=0.030 Sum_probs=94.0
Q ss_pred HHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccc--hhH--HHHHHHHHhhcccccccccccchhcccCCCC
Q 012500 43 TVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSF--DFW--SIAICRMLVGVGEASFISLAAPFIDDNAPVP 117 (462)
Q Consensus 43 ~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~--~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~ 117 (462)
.+.-..+.++.+.+ ||+|||+.+....+++++..++..... |.. .++.+|++. .+.+.+.+.|..|.+|.+
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafi----sg~fqvaYvYtPEVyPTa 466 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFI----SGAFQVAYVYTPEVYPTA 466 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH----hchheEEEEecCcccchh
Confidence 44456777888999 999999999999999999988876654 332 334566554 334557889999999999
Q ss_pred CchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhcc
Q 012500 118 QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 172 (462)
Q Consensus 118 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 172 (462)
-|+...|.-....-+|.++.|.++ +....+-..+..+.+...++.++...++.
T Consensus 467 vRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffP 519 (528)
T KOG0253|consen 467 VRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFP 519 (528)
T ss_pred hhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeee
Confidence 999999999999999999999999 33333344556666666667777666663
No 240
>PRK09669 putative symporter YagG; Provisional
Probab=98.59 E-value=1.2e-06 Score=83.62 Aligned_cols=147 Identities=17% Similarity=0.056 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHH
Q 012500 255 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 333 (462)
Q Consensus 255 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (462)
...+.....+..+++.|+.+..|.++... ....+..+...+..++.|+++||.+.|..++|+++..+....++...+..
T Consensus 19 ~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f 98 (444)
T PRK09669 19 TACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTF 98 (444)
T ss_pred hhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHH
Confidence 34444456667889999999999997666 34466677888899999999999766555555777666555554444433
Q ss_pred Hhhh------hHHHHHHHHHHHHHHHhccccceeeeeccCC-cchhhHHHHHHHHHHhhhccccchhHHHHHHhhh
Q 012500 334 CLSS------LYGFLALFTVGELLVFATQAPVNYVCLHSVK-PSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 402 (462)
Q Consensus 334 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~ 402 (462)
..++ .....+...+...+......+..+...+..+ +++|.+..+......+. |..+++.+...+....
T Consensus 99 ~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~-G~~i~~~~~~pl~~~~ 173 (444)
T PRK09669 99 YTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFI-GGLIVSVIALPLVDIL 173 (444)
T ss_pred hCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHh
Confidence 3321 2233333344444555555566666666653 47788887777444444 7666765555555443
No 241
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.59 E-value=2.8e-06 Score=75.82 Aligned_cols=129 Identities=12% Similarity=0.060 Sum_probs=101.9
Q ss_pred HHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHH---hhhhHHH
Q 012500 266 YWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC---LSSLYGF 341 (462)
Q Consensus 266 ~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 341 (462)
...| .+++.++.+..+. .+......+..+..+..+++.+|+|.| +-++.+..+.++.+.+... ..+....
T Consensus 34 iLip-~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk-----~gi~lgL~l~avg~~lF~pAa~~~~y~~F 107 (422)
T COG0738 34 ILIP-HLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYK-----AGIVLGLLLYAVGAALFWPAASSKSYGFF 107 (422)
T ss_pred hhHH-HHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 3444 6788899997666 445777888899999999999999999 7777777777776666643 3355566
Q ss_pred HHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhh
Q 012500 342 LALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 401 (462)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~ 401 (462)
++..++.+.+.+......+.++...-+++..+.-+.+.+.+... |++++|.+++.+..+
T Consensus 108 L~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~l-Ga~~gp~~g~~lils 166 (422)
T COG0738 108 LVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGL-GAILGPLLGSSLILS 166 (422)
T ss_pred HHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhh-HHHHHHHHHHHHHHh
Confidence 77778888888888889999999998888778888888655554 999999999998883
No 242
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.57 E-value=7.6e-07 Score=78.16 Aligned_cols=165 Identities=18% Similarity=0.115 Sum_probs=127.6
Q ss_pred chhHHHHHHHHHHH-------hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-c-ccCCchhHHHHHHHH
Q 012500 2 SFCIHVLLCLIGLI-------LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-C-SHNPFRLIGVGLSVW 72 (462)
Q Consensus 2 ~~~i~~~~~~~~~~-------~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-d-r~Grr~~l~~~~~~~ 72 (462)
+|.+..+.-.-+.. +|.+..| -+.|..+.|. +.+...+.++..++....+ + +-++|+..+...+++
T Consensus 210 aW~vtLfmGlqS~~~Y~~~~WLP~ili~---~G~sa~~aG~--llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~ 284 (395)
T COG2807 210 AWQVTLFMGLQSLLYYIVIGWLPAILID---RGLSAAEAGS--LLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLM 284 (395)
T ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHHH---cCCCHHHhhh--HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 45555555333222 7877777 5888888776 8888888888888888888 6 567888888888888
Q ss_pred HHHHHhhhccchhHHHHHHHHHhhcccccccccccchhcccCC-CCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccc-h
Q 012500 73 TFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-W 150 (462)
Q Consensus 73 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-w 150 (462)
.++...+.+.+.-..+.. -++.|+|.|..+|.+..++.+-.+ +++-++..++.|....+=..+||.+.|++.|..| |
T Consensus 285 l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw 363 (395)
T COG2807 285 LVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSW 363 (395)
T ss_pred HHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCCh
Confidence 888888888775544444 499999999999999999988775 4556667777777777777889999999998764 9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcc
Q 012500 151 RYAFWGEAILMLPFAVLAFVIK 172 (462)
Q Consensus 151 r~~f~~~~~~~~~~~~~~~~~~ 172 (462)
+..+.......+...+..+..-
T Consensus 364 ~~~~~~l~~~~i~m~i~Gl~a~ 385 (395)
T COG2807 364 SAPLVLLALATLLMLIFGLRAG 385 (395)
T ss_pred HHHHHHHHHHHHHHHHHHhhcc
Confidence 9999988888777777766554
No 243
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.56 E-value=3.5e-07 Score=89.33 Aligned_cols=129 Identities=14% Similarity=0.118 Sum_probs=109.2
Q ss_pred hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeee
Q 012500 284 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVC 363 (462)
Q Consensus 284 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (462)
...++..++..+|.++.|.++||+||| +.+..+.++..+..+.....++.+...+.=++.|++.+........+.
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~GRk-----~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~ 196 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRFGRK-----PVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLV 196 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhcccH-----HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhh
Confidence 344778899999999999999999999 899999999888888888899999999999999999999999999999
Q ss_pred eccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHHHHHHHH
Q 012500 364 LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGI 422 (462)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 422 (462)
.|.+++++|+.+..+ ...... ++.+++...+++.. +|+..++......+...+.
T Consensus 197 ~E~~~~~~R~~~~~~-~~~~~~-~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 197 AEIVSPKQRGLALTL-GGFFFV-GGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLL 250 (521)
T ss_pred eeecCcchhhHHHHH-HHHHHH-HHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 566666 66778888888887 5777777766665544444
No 244
>PRK11462 putative transporter; Provisional
Probab=98.56 E-value=2e-06 Score=82.16 Aligned_cols=150 Identities=13% Similarity=0.048 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHH
Q 012500 253 GYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT 331 (462)
Q Consensus 253 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (462)
.-+..+........|+..|+.+..|.++... .+..+.-+...+.-++.|+++||...|..++|+++..+....++...+
T Consensus 17 g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~l 96 (460)
T PRK11462 17 GDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVL 96 (460)
T ss_pred chhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHH
Confidence 3344455566677889999999999997655 334556677788899999999998766666667887776666655555
Q ss_pred HHHhhh------hHHHHHHHHHHHHHHHhccccceeeeeccCCc-chhhHHHHHHHHHHhhhccccchhHHHHHHhhhc
Q 012500 332 AFCLSS------LYGFLALFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 403 (462)
Q Consensus 332 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g 403 (462)
++..++ .....+..++...+......|..++..+..++ ++|++..+....... +|..+++.+...+.+..|
T Consensus 97 lf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~-iG~~~~~~~~~plv~~~g 174 (460)
T PRK11462 97 AYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLAT-AGGMLSTVLMMPLVNLIG 174 (460)
T ss_pred HHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhC
Confidence 443331 22233444445666666666777777777664 899999998854444 477777766655555544
No 245
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.54 E-value=3.7e-05 Score=70.76 Aligned_cols=365 Identities=9% Similarity=-0.042 Sum_probs=173.6
Q ss_pred hhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc--cccCCchhHH------HHHHHHHHHHHhh--------
Q 012500 16 LKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ--CSHNPFRLIG------VGLSVWTFATAGC-------- 79 (462)
Q Consensus 16 ~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l--dr~Grr~~l~------~~~~~~~~~~~~~-------- 79 (462)
+|-++++.. -+.+-+|.+.=-+.+-.+---++++|+.+.+ .|+||||.-+ .|..+..++.-..
T Consensus 23 iPflL~~~~-~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g~~m~~l~~~i~~~~~~~~~ 101 (544)
T PF13000_consen 23 IPFLLQSMA-KKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLSGILMLYLSYNISQWLLFDGV 101 (544)
T ss_pred chhhhcccc-CCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhHHHHHHHHHHHHHHhccchhhccccc
Confidence 675555511 1455555554112233333467899999988 8999999533 3333333333220
Q ss_pred --hc-------cch--hHHHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcc-
Q 012500 80 --GS-------SFD--FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH- 147 (462)
Q Consensus 80 --~~-------~~~--~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~- 147 (462)
.+ .++ ...+...-++.=+-.+....+...+.-....+++++.|......+.+.|..++..+--.+.+.
T Consensus 102 ~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlalns~~ 181 (544)
T PF13000_consen 102 DDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLALNSPD 181 (544)
T ss_pred chhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhhCCHH
Confidence 00 011 112233333444444556666677777777889999988888888888887776554333320
Q ss_pred ------------cc---hHHHHHHHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccc
Q 012500 148 ------------LN---WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISD 212 (462)
Q Consensus 148 ------------~g---wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (462)
.| -..-..+.|...++..+...++.+|.+.....++.++.. ..+.+ .++...
T Consensus 182 f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~----------~~~~~---~~~~~~ 248 (544)
T PF13000_consen 182 FCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPIN----------KSDGK---SKEISI 248 (544)
T ss_pred HHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCccccccc----------ccccc---ccccce
Confidence 11 111122233333444455555555533221111111000 00000 000000
Q ss_pred hhhhhhhhccccccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchhhhhhhHHHh
Q 012500 213 QASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVC 292 (462)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 292 (462)
+.++.+ ...+......++.-+.+.+++|-|++..+.+.....-.++...-.-...=+.+ .|++...... ..+.
T Consensus 249 ~~~~~~---~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl---~~li 321 (544)
T PF13000_consen 249 EYDESD---VISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLAL---LVLI 321 (544)
T ss_pred eccccc---ccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHH---HHHH
Confidence 000000 00000001223334456667788888887776666666554444433333444 5666544422 2234
Q ss_pred hhhhhhhhhHHHhhhcccccc----------------chhH----------HHHHHH---HHHHHH-HHHHHhh-----h
Q 012500 293 GIVGTISGGFILDQMGATISN----------------AFKL----------LSAATF---LGAISC-LTAFCLS-----S 337 (462)
Q Consensus 293 ~~~~~~~~g~l~d~~~~~~~~----------------~~~~----------~~~~~~---~~~~~~-~~~~~~~-----~ 337 (462)
.++..++.|+++.|+-+..+. ..+. ...+.. +.++.. ......+ +
T Consensus 322 ~~P~qii~~~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~~g~v~ 401 (544)
T PF13000_consen 322 DFPFQIILPYYIGKWSAGSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLIVYFFPSDGPVP 401 (544)
T ss_pred hhhHHHHHHHHhhhhhcCCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHheEEeCCCCCCcc
Confidence 444555555555555322110 0011 111111 111110 0001111 1
Q ss_pred hH---HHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhh
Q 012500 338 LY---GFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 402 (462)
Q Consensus 338 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~ 402 (462)
.+ .++..-.+..+.....+....++-++..+|..-|+.+.+.|+..|. |+---..+.=++.|..
T Consensus 402 ~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNL-GGtWP~~~vL~lVD~f 468 (544)
T PF13000_consen 402 TYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNL-GGTWPRTFVLWLVDYF 468 (544)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhc-CCCchHHHHHHHhhhc
Confidence 11 1222223344444466667788888889999999999999999998 6665555666666654
No 246
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.51 E-value=2.6e-06 Score=81.95 Aligned_cols=148 Identities=8% Similarity=0.021 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHH
Q 012500 252 LGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 330 (462)
Q Consensus 252 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (462)
+..+..+.....+..|++.|+.+..|.++... .+..+.-+...+..++.|+++||...|..++|+++..+....++...
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~ 92 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLF 92 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHH
Confidence 33445566666777889999999999997655 33466677778889999999996633333334666666666555544
Q ss_pred HHHHhhh------hHHHHHHHHHHHHHHHhccccceeeeeccC-CcchhhHHHHHHHHHHhhhccccchhHHHHHHh
Q 012500 331 TAFCLSS------LYGFLALFTVGELLVFATQAPVNYVCLHSV-KPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 400 (462)
Q Consensus 331 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~ 400 (462)
++...++ .....+..++...+......+..+...+.. ++++|.+..+......+. |+.+.+.+...+.+
T Consensus 93 llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~i-g~~~~~~~~~~~~~ 168 (473)
T PRK10429 93 LLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASL-AGFVTAGFTLPFVN 168 (473)
T ss_pred HHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 4443221 112333334455566666777777777776 458899988885444444 54555544444433
No 247
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.47 E-value=6.5e-06 Score=76.32 Aligned_cols=153 Identities=18% Similarity=0.062 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchhh-hhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHH
Q 012500 250 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMM-FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS 328 (462)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 328 (462)
.-..-+..+........|+..|+.+..|.++.... +..+.-+...+.-++.|.++||..+|..++|++++.+.+..++.
T Consensus 17 Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~ 96 (467)
T COG2211 17 YGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIV 96 (467)
T ss_pred hcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHH
Confidence 33344555666677778999999999999976553 33455566788889999999999888888889988887777776
Q ss_pred HHHHHHhh------hhHHHHHHHHHHHHHHHhccccceeeeeccCCc-chhhHHHHHHHHHHhhhccccchhHHHHHHhh
Q 012500 329 CLTAFCLS------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 401 (462)
Q Consensus 329 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~ 401 (462)
..+.+..+ ......+...+.+.++.....|..++..+..++ ++|.+..+.-....+. |..+...+.+.+...
T Consensus 97 ~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~-g~~l~~~~~~plv~~ 175 (467)
T COG2211 97 AVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASL-GGLLVAVLFPPLVKL 175 (467)
T ss_pred HHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 66666554 233445556667777777777777777777555 7899999988544444 777777777777766
Q ss_pred hc
Q 012500 402 VN 403 (462)
Q Consensus 402 ~g 403 (462)
.+
T Consensus 176 ~g 177 (467)
T COG2211 176 FG 177 (467)
T ss_pred hC
Confidence 65
No 248
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.47 E-value=1.3e-06 Score=83.07 Aligned_cols=148 Identities=15% Similarity=0.103 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHH
Q 012500 255 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 333 (462)
Q Consensus 255 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (462)
+..+........+++.|+.+..+.++... .......+...+..++.|+++||...|..++|+++..+....++...+..
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf 90 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLF 90 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhh
Confidence 34444555566788889999999997555 33355667778888899999995443333334666666666666555555
Q ss_pred Hh-h-------hhHHHHHHHHHHHHHHHhccccceeeeeccCCc-chhhHHHHHHHHHHhhhccccchhHHHHHHhhhc
Q 012500 334 CL-S-------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 403 (462)
Q Consensus 334 ~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g 403 (462)
.. + ......+..++...+......+..+...+..++ ++|.+..+..+..... |..+...+.+.+.+..|
T Consensus 91 ~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~-g~~l~~~~~~~l~~~~g 168 (428)
T PF13347_consen 91 SPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMI-GSLLASFLAPILVSWFG 168 (428)
T ss_pred ccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHH-HHHHHHHHhhhhhhhhc
Confidence 43 2 112234455555677777777888888888875 7899988888544444 77666666776666655
No 249
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.46 E-value=1.4e-06 Score=82.50 Aligned_cols=134 Identities=19% Similarity=0.154 Sum_probs=106.6
Q ss_pred hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeee
Q 012500 284 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVC 363 (462)
Q Consensus 284 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (462)
...+++.++.+++.+.++.+.||++.. +.+....++-....++....++.+..++.-++.|++-+..+|....++
T Consensus 85 ~~~t~F~v~Yii~~~p~~~L~~r~~ls-----~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~l 159 (495)
T KOG2533|consen 85 VLDTVFYVGYIIGQFPSGLLGDRFPLS-----KGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAIL 159 (495)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHhCChH-----HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHH
Confidence 445788999999999999999999965 666666666666665666688899999999999999999999999999
Q ss_pred eccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhh-----hcchhHHHHHHHHHHHHHHHHH
Q 012500 364 LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH-----VNNWRKTTLALTSIFFLAAGIW 423 (462)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~-----~g~~~~~~~~~~~~~~~~~~~~ 423 (462)
..-+.+++|+.-+|+.+...+. |+++|+.+...+.+. .-+|++.|++-+++.+...++.
T Consensus 160 g~wy~~~e~g~r~~~~~a~~~~-g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~ 223 (495)
T KOG2533|consen 160 GNWYGKSERGLRMGIWYASASL-GNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVV 223 (495)
T ss_pred HhhcChhhhhhhHHHHHHhcch-hhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheE
Confidence 9999999999999999655555 888888777665431 1258888888887665555443
No 250
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.43 E-value=1.8e-05 Score=69.88 Aligned_cols=337 Identities=9% Similarity=-0.066 Sum_probs=171.7
Q ss_pred HhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc--cccCCchh------HHHHHHHHHHHHHhh------h
Q 012500 15 ILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ--CSHNPFRL------IGVGLSVWTFATAGC------G 80 (462)
Q Consensus 15 ~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l--dr~Grr~~------l~~~~~~~~~~~~~~------~ 80 (462)
.+|.+++. -+.|-++.+.--+......--++++|+.+.+ .|+||||. +++|.++..++...- +
T Consensus 52 ~iP~lL~a---k~vSyt~~a~fS~ay~P~sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng 128 (510)
T KOG3574|consen 52 AIPLLLQA---KGVSYTSQAIFSFAYWPFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNG 128 (510)
T ss_pred hhHHHhcC---CCcchhhhhhhhhhhhHHHHHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCC
Confidence 47866663 3556555554113333444556888888866 78999994 333333333333221 1
Q ss_pred ccchhHHHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhc-------ccchH--
Q 012500 81 SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-------HLNWR-- 151 (462)
Q Consensus 81 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-------~~gwr-- 151 (462)
-.++...+...-++.-+..+....+...+.-.+..+++.|-+......+.+.|..++..+--.+.. ..+|.
T Consensus 129 ~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~ 208 (510)
T KOG3574|consen 129 GLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLD 208 (510)
T ss_pred CCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcCc
Confidence 123444444455666677777777888888888888999998888888888887777654322221 00111
Q ss_pred -------HHHHHHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhcccc
Q 012500 152 -------YAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGE 224 (462)
Q Consensus 152 -------~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (462)
.-.+..+...++...+..+...| +++.. .+ +.+
T Consensus 209 ~g~ItL~gy~~fwg~~~~vat~Lv~~~kke---------~~~~~-~~---------------------e~~--------- 248 (510)
T KOG3574|consen 209 QGFITLAGYLWFWGALFIVATTLVALLKKE---------NDESV-DE---------------------ELE--------- 248 (510)
T ss_pred cceEEhhHHHHHHHHHHHHHHHHHHHhcCC---------Cchhh-hh---------------------hhh---------
Confidence 11222223223333333333211 11100 00 000
Q ss_pred ccchhhhhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHH
Q 012500 225 SRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFI 303 (462)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l 303 (462)
...++..+-++++++-|.+..........-.++.+.....+.-+.+ .|.+.... .+........++.....|++
T Consensus 249 ----~~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ 323 (510)
T KOG3574|consen 249 ----LGIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVPLVPLQIALPLYIGKW 323 (510)
T ss_pred ----cCHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeeehhhHHHhhhhhheee
Confidence 0111112345666777777766666666666666666666666665 45554333 22222223333333333333
Q ss_pred Hhhhcccccc--ch--hHHHHHHHHHHHHHHHHHHhhh---------hHHHHHHHHHHHHHHHhccccceeeeeccCCcc
Q 012500 304 LDQMGATISN--AF--KLLSAATFLGAISCLTAFCLSS---------LYGFLALFTVGELLVFATQAPVNYVCLHSVKPS 370 (462)
Q Consensus 304 ~d~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (462)
... .|... .+ +.=+.................. ....+....+...+....+...++..++..+|.
T Consensus 324 ta~--~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~ 401 (510)
T KOG3574|consen 324 TAG--PRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPA 401 (510)
T ss_pred cCC--CCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcc
Confidence 321 11100 00 1111122222222111111111 111122233444444455556677888889999
Q ss_pred hhhHHHHHHHHHHhhhccccchhHHHHHHhhh
Q 012500 371 LRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 402 (462)
Q Consensus 371 ~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~ 402 (462)
..|+.+.+.|...+. |+-.-..+..++.|..
T Consensus 402 iggTymTlLNTLsnL-Gg~wp~tv~l~l~D~l 432 (510)
T KOG3574|consen 402 IGGTYMTLLNTLSNL-GGNWPGTVALWLADGL 432 (510)
T ss_pred cCccHHHHHHHHHHh-cCCcHHHHHHHhcccC
Confidence 999999999988888 5554555777887765
No 251
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.34 E-value=4.7e-06 Score=81.08 Aligned_cols=128 Identities=16% Similarity=0.132 Sum_probs=102.2
Q ss_pred hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeee
Q 012500 284 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVC 363 (462)
Q Consensus 284 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (462)
.+.+...+++.++.++.|+++|++||| +.+..+.+...+..++....++.....+.=++.|++.+......+.+.
T Consensus 93 ~~~s~~~lga~~g~l~~g~l~d~~GRk-----~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~ 167 (513)
T KOG0254|consen 93 LLTSILNLGALVGSLLAGRLGDRIGRK-----KTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYI 167 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhH
Confidence 566788899999999999999999999 888888888888888888888999999999999999998888888888
Q ss_pred eccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhh-cchhHHHHHHHHHHHH
Q 012500 364 LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV-NNWRKTTLALTSIFFL 418 (462)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~~~~~~~~~~~~ 418 (462)
.|..|++.||...+..+.... +|..++ .+.+...++. .+|+..+....+..+.
T Consensus 168 sEiap~~~RG~l~~~~~l~~~-~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~ 221 (513)
T KOG0254|consen 168 SEIAPAHIRGTLVSLYQLFIT-IGILLG-YCINYGTSKVYAGWRIPLGLALIPAVI 221 (513)
T ss_pred hhcCChhhhHHHHHHHHHHHH-HHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHH
Confidence 898988999999999976666 477766 4555555433 2466555444444333
No 252
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.29 E-value=3.8e-08 Score=94.33 Aligned_cols=126 Identities=13% Similarity=0.108 Sum_probs=94.2
Q ss_pred hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHhccccce
Q 012500 284 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS---SLYGFLALFTVGELLVFATQAPVN 360 (462)
Q Consensus 284 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 360 (462)
...+...++.++|.++.|++.||+||| +.+..+..+..+..++....+ +.+...+.-++.|++.+...+...
T Consensus 50 ~~~~~~~~g~~~G~~~~g~~~d~~GRk-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~ 124 (451)
T PF00083_consen 50 LLTSSFFIGAIVGALIFGFLADRYGRK-----PALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSP 124 (451)
T ss_pred HHHHHHHhhhccccccccccccccccc-----cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 345777899999999999999999999 777777777777766666666 777788888889999999999999
Q ss_pred eeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhc---chhHHHHHHHHHH
Q 012500 361 YVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN---NWRKTTLALTSIF 416 (462)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g---~~~~~~~~~~~~~ 416 (462)
.++.|..|++.|+...++.+.... +|..++..+.-.. .... .|+..+.+..+..
T Consensus 125 ~~~~E~~~~~~R~~~~~~~~~~~~-~G~~~~~~~~~~~-~~~~~~~~Wr~~~~~~~~~~ 181 (451)
T PF00083_consen 125 IYISEIAPPKHRGFLSSLFQLFWA-LGILLASLIGYIV-SYYSDNWGWRILLIFGAIPS 181 (451)
T ss_pred cccccccccccccccccccccccc-ccccccccccccc-cccccccccccccccccccc
Confidence 999999999999999998864444 4777776443333 2222 2555544444443
No 253
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.28 E-value=0.0015 Score=62.10 Aligned_cols=230 Identities=13% Similarity=0.108 Sum_probs=127.5
Q ss_pred HHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhcc---------ch----------------------hHHHHHHH
Q 012500 45 TQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSS---------FD----------------------FWSIAICR 92 (462)
Q Consensus 45 ~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~---------~~----------------------~~~l~~~r 92 (462)
..++...+..++ +|++|.+++-.....+.....+.++. ++ .|.+.+.-
T Consensus 71 ~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfY 150 (491)
T PF03219_consen 71 VAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFY 150 (491)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Confidence 344556677888 99999998877666666555555542 11 11222222
Q ss_pred HHhhcccccccc-cccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhc---------ccchHHHHHHHHHHHH
Q 012500 93 MLVGVGEASFIS-LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS---------HLNWRYAFWGEAILML 162 (462)
Q Consensus 93 ~l~G~~~g~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~---------~~gwr~~f~~~~~~~~ 162 (462)
++.-+-.....+ .-..+..|.++.+|-.|..+++..+.++|.+++..+...+.+ ...|...+.......+
T Consensus 151 v~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~ 230 (491)
T PF03219_consen 151 VMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVL 230 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHH
Confidence 222222222222 346778999999999999999999999999999998888877 2346544332221111
Q ss_pred HHHHHH---hhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhhhhcchhhHH
Q 012500 163 PFAVLA---FVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTK 239 (462)
Q Consensus 163 ~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (462)
+.++.. ...+.+.... +++..+.. ..++++ +...+..++++
T Consensus 231 ~~g~~i~~~~~~~~~~vl~--~~~~~~~~---------------------------~~~kk~-------k~k~s~~es~k 274 (491)
T PF03219_consen 231 ILGIVIILLYRYMNKNVLT--DPRFYPSA---------------------------KKKKKK-------KPKMSLKESFK 274 (491)
T ss_pred HHHHHHHHHHHHHHHHccC--ccccchhh---------------------------hccccc-------CCCccHHHHHH
Confidence 111111 1122111100 00000000 000000 11123346788
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-h---hhhhHHHhhhhhhhhhhHHHhhhccc
Q 012500 240 VLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-M---FGGVTIVCGIVGTISGGFILDQMGAT 310 (462)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~g~l~d~~~~~ 310 (462)
.++++|.+..+++...+++...+.+....-...++.+..+.+-. . +....++..++..++++.+.+|+|-+
T Consensus 275 ~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~ 349 (491)
T PF03219_consen 275 LLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWR 349 (491)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 89999999988887777777766665544445555553332211 1 22444555566667778888888865
No 254
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.25 E-value=7e-05 Score=70.36 Aligned_cols=98 Identities=11% Similarity=-0.060 Sum_probs=56.6
Q ss_pred hHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHh-hhc----c---chhHHHHHHHHHhhcccccccccccc
Q 012500 38 NVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAG-CGS----S---FDFWSIAICRMLVGVGEASFISLAAP 108 (462)
Q Consensus 38 ~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~-~~~----~---~~~~~l~~~r~l~G~~~g~~~~~~~~ 108 (462)
+.....+..++..+..-.+ .|+..|.=+..++++..+..++ ..+ . ..++..++.-++.|++.+........
T Consensus 50 ~~~~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~~q~s~~g 129 (437)
T TIGR00939 50 YTLASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMALLQGSLFG 129 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHhhhhhhcccchh
Confidence 3445566666666666666 6666533333333322222111 111 1 24666777888899999988887777
Q ss_pred hhcccCCCCCchhHHHHHHhhhhhhhhhhhhH
Q 012500 109 FIDDNAPVPQKTAWLSMFYMCIPTGVALGYVY 140 (462)
Q Consensus 109 ~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~ 140 (462)
+.+ .+|+ +.++.+..+.+++++++..+
T Consensus 130 la~-~fp~----~~~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 130 LAG-VFPS----TYSSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred hcc-cCCH----HHHHHHHhcchhHHHHHHHH
Confidence 777 5553 34566666666666665544
No 255
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.23 E-value=2.9e-05 Score=70.13 Aligned_cols=163 Identities=16% Similarity=0.143 Sum_probs=124.7
Q ss_pred hhHHHHHHHHHHHhhhhhhhcc---ccccccccccchhhHHHHHHHHHhhhhhhccc--cccCCchhHHHHHHHHHHHHH
Q 012500 3 FCIHVLLCLIGLILKRSMKKKK---FLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ--CSHNPFRLIGVGLSVWTFATA 77 (462)
Q Consensus 3 ~~i~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l--dr~Grr~~l~~~~~~~~~~~~ 77 (462)
+++++++...++.....+-|-+ -++++..|... +......|.+++....|++ .|.++|++-..++....++..
T Consensus 213 f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~--Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~ 290 (403)
T PF03209_consen 213 FFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTR--LTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFA 290 (403)
T ss_pred HHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHH--HHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHH
Confidence 3455555566665433332211 15666666434 8888889999998889988 478888888888888877776
Q ss_pred hhh---ccchhHHHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcc-------
Q 012500 78 GCG---SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH------- 147 (462)
Q Consensus 78 ~~~---~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~------- 147 (462)
+.. ...+.+.+...-++.|++.|.......+.+.|..++++.|.++|.+.....++..++..+++.+.|.
T Consensus 291 lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~ 370 (403)
T PF03209_consen 291 LIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGN 370 (403)
T ss_pred HHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 644 4467889999999999999999999999999999999999999999999999999999999887652
Q ss_pred ---cchHHHHHHHHHHHHHHHHH
Q 012500 148 ---LNWRYAFWGEAILMLPFAVL 167 (462)
Q Consensus 148 ---~gwr~~f~~~~~~~~~~~~~ 167 (462)
.+|-.+|.+.++..++...+
T Consensus 371 ~~~~aY~~VF~lEa~ll~~a~~l 393 (403)
T PF03209_consen 371 SPALAYGVVFALEAVLLLAALVL 393 (403)
T ss_pred CcchHHHHHHHHHHHHHHHHHHH
Confidence 35778888887655444433
No 256
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.16 E-value=3.1e-06 Score=76.64 Aligned_cols=133 Identities=10% Similarity=-0.063 Sum_probs=99.5
Q ss_pred HHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchh----HHHHHHHHHhhc-ccccccccccchhcccCCCC
Q 012500 44 VTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDF----WSIAICRMLVGV-GEASFISLAAPFIDDNAPVP 117 (462)
Q Consensus 44 ~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~----~~l~~~r~l~G~-~~g~~~~~~~~~i~~~~~~~ 117 (462)
.+++.+-++...+ |+.|||+..+.|.+++++..+..+...|. ..+++.-.+..+ +.-+-......+-+|.+|.+
T Consensus 359 ~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FPar 438 (538)
T KOG0252|consen 359 CSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPAR 438 (538)
T ss_pred HccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHH
Confidence 3444577778888 99999999999999999999999988771 112222222222 12223334456678999999
Q ss_pred CchhHHHHHHhhhhhhhhhhhhHHHHhhc-----ccchHHHHHHHHHHHHHHHHHHhhccccccC
Q 012500 118 QKTAWLSMFYMCIPTGVALGYVYGGVVGS-----HLNWRYAFWGEAILMLPFAVLAFVIKPLQLK 177 (462)
Q Consensus 118 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-----~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~ 177 (462)
-|+..-|+..++.-.|.++|...-.++.+ ..+-|+++++.+...++..+.. +++||+..
T Consensus 439 vR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T-~l~pEtk~ 502 (538)
T KOG0252|consen 439 VRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFT-LLIPETKG 502 (538)
T ss_pred HhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHhee-EEeecccc
Confidence 99999999999999999999999899888 7789999999988776655544 44477643
No 257
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.15 E-value=1.3e-05 Score=63.00 Aligned_cols=101 Identities=10% Similarity=0.089 Sum_probs=83.4
Q ss_pred HHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccccccchhcccCCCCCchh
Q 012500 43 TVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTA 121 (462)
Q Consensus 43 ~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~ 121 (462)
.....+++++...+ +++|.|+.+++|.+.+.+-.... +-++.+.++.+-.+.|++.+..+++...++.+..++++|++
T Consensus 47 Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~ 125 (156)
T PF05978_consen 47 YGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGR 125 (156)
T ss_pred HHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhh
Confidence 33344555556666 77799999999999988655543 56778899999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhhhhhHHHHh
Q 012500 122 WLSMFYMCIPTGVALGYVYGGVV 144 (462)
Q Consensus 122 ~~~~~~~~~~~G~~~g~~~~~~l 144 (462)
..+++......+.++|.++...+
T Consensus 126 ~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 126 NTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888887766554
No 258
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.12 E-value=2.4e-05 Score=66.87 Aligned_cols=132 Identities=11% Similarity=0.130 Sum_probs=77.3
Q ss_pred HHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHh-h-
Q 012500 260 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL-S- 336 (462)
Q Consensus 260 ~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 336 (462)
..+.+..|.|. +++..|.+..+. .+.....++..+ .+..|.+.|++|.+ ..+.++.............. .
T Consensus 17 t~Y~Fs~yS~~-Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~-----~~l~iG~~~~~~GY~~~~l~~~~ 89 (250)
T PF06813_consen 17 TTYTFSAYSPQ-LKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPW-----VVLLIGAVLGFVGYGLLWLAVSG 89 (250)
T ss_pred cccchhhhhHH-HHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchH-----HHHHHHHHHHHHHHHHHHHHHhC
Confidence 35566666774 456788887665 444556666665 47889999999998 66666666655554444332 1
Q ss_pred -----hhHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHh
Q 012500 337 -----SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 400 (462)
Q Consensus 337 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~ 400 (462)
+.|......++.+.+.............+.+| ++||++.|+.....+. ++.+-..+...+.+
T Consensus 90 ~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GL-Saai~t~i~~~~f~ 156 (250)
T PF06813_consen 90 RIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGL-SAAIFTQIYSAFFG 156 (250)
T ss_pred ccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHh-HHHHHHHHHHHHcC
Confidence 22333333333333322222333333445665 6799999999766666 55544445444444
No 259
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=98.04 E-value=4.1e-05 Score=65.59 Aligned_cols=134 Identities=9% Similarity=-0.113 Sum_probs=96.2
Q ss_pred hhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccccccchhcccC
Q 012500 36 SVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNA 114 (462)
Q Consensus 36 s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~ 114 (462)
+.+..+-.+..++.-+.+..+ ||+.--.=..+..++.+.+..+.+++++.++-+.+-.+..++.|.....-.++-+. +
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~-Y 143 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSR-Y 143 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhcc-C
Confidence 336677777888888888888 98765555666778888999999999999999999999988888777655544443 3
Q ss_pred CCCCchhHHHHHHhhhhhhhhhhhhHHHHhhc--ccchHHHHHHHHHHHHHHHHHHhhcccc
Q 012500 115 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS--HLNWRYAFWGEAILMLPFAVLAFVIKPL 174 (462)
Q Consensus 115 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~--~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 174 (462)
|+ ...+.++.+.+.+.++|..--..+.+ ...-|...++...+..+.+...++.+++
T Consensus 144 ~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~ 201 (409)
T KOG3880|consen 144 PS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKS 201 (409)
T ss_pred CC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCC
Confidence 32 23455666666667777655555554 3457888888888777777777777644
No 260
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.98 E-value=1.6e-05 Score=54.62 Aligned_cols=75 Identities=20% Similarity=0.142 Sum_probs=64.5
Q ss_pred HHHHHHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHH
Q 012500 10 CLIGLILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSI 88 (462)
Q Consensus 10 ~~~~~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l 88 (462)
|.++.++|...++ .+.|.++.++ +.+...+|++++++...++ ++..+++.+..+.+...+..+.+++.++.+.+
T Consensus 9 FayTplLP~M~~~---~~ls~~~ag~--lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 9 FAYTPLLPLMQAD---GGLSLSQAGW--LASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred HHHHhHhHHHHHh---cCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 6677889955555 6778888555 9999999999999999999 99888999999999999999999999988765
Q ss_pred H
Q 012500 89 A 89 (462)
Q Consensus 89 ~ 89 (462)
.
T Consensus 84 ~ 84 (85)
T PF06779_consen 84 S 84 (85)
T ss_pred h
Confidence 3
No 261
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.86 E-value=0.0017 Score=63.12 Aligned_cols=132 Identities=16% Similarity=0.135 Sum_probs=94.1
Q ss_pred hHHHHHHHHHhhhhhhccc-cc-cCCchhHHHHHHHHHHHHHhhhccch-------------------------hHHHHH
Q 012500 38 NVLEFTVTQLVCSSHHCSQ-CS-HNPFRLIGVGLSVWTFATAGCGSSFD-------------------------FWSIAI 90 (462)
Q Consensus 38 ~~~~~~~~~~~~~~~~g~l-dr-~Grr~~l~~~~~~~~~~~~~~~~~~~-------------------------~~~l~~ 90 (462)
..+.+.-......+..+.+ |- +||-+++.++.++..++..+..++.. ...++.
T Consensus 78 ~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~ 157 (571)
T KOG1237|consen 78 NVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYG 157 (571)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHH
Confidence 3333333333444444555 43 57779999998888888655443311 135666
Q ss_pred HHHHhhcccccccccccchhcccCC---CC---CchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHH
Q 012500 91 CRMLVGVGEASFISLAAPFIDDNAP---VP---QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPF 164 (462)
Q Consensus 91 ~r~l~G~~~g~~~~~~~~~i~~~~~---~~---~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~ 164 (462)
+.-+..+|.|+.-|...++-+|-++ ++ ++...+.++....++|..++..+-.+.-++.+|.+-|.+..+...+.
T Consensus 158 ~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~la 237 (571)
T KOG1237|consen 158 ALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALA 237 (571)
T ss_pred HHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHH
Confidence 7778888999999999999999998 32 23367889999999999999998888888899999999887765554
Q ss_pred HHHHh
Q 012500 165 AVLAF 169 (462)
Q Consensus 165 ~~~~~ 169 (462)
.++.+
T Consensus 238 i~iF~ 242 (571)
T KOG1237|consen 238 ILIFL 242 (571)
T ss_pred HHHHH
Confidence 44433
No 262
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.81 E-value=0.03 Score=52.20 Aligned_cols=238 Identities=15% Similarity=0.063 Sum_probs=129.9
Q ss_pred hhhHHHHHH-HHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhcc---------ch--------------------
Q 012500 36 SVNVLEFTV-TQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSS---------FD-------------------- 84 (462)
Q Consensus 36 s~~~~~~~~-~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~---------~~-------------------- 84 (462)
+.+-+...+ ..++..++..++ +++.|.+++-.-+..+....+++++. ++
T Consensus 64 ~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~il 143 (509)
T COG3202 64 SFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFIL 143 (509)
T ss_pred HHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeE
Confidence 445555555 566778888899 99999999887777777777776653 11
Q ss_pred ---hHHHHHHHHHhhcccccccc-cccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhccc----------ch
Q 012500 85 ---FWSIAICRMLVGVGEASFIS-LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL----------NW 150 (462)
Q Consensus 85 ---~~~l~~~r~l~G~~~g~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~----------gw 150 (462)
.|..-+.-.+.=+-...... .-.....|....+|-.|..+.++.+.+++..++..+..++.++. .-
T Consensus 144 i~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~ 223 (509)
T COG3202 144 IVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLL 223 (509)
T ss_pred eecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHH
Confidence 01111111111111111111 22445778888889999999999999999999999988887631 13
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccccccccccccccchhhhhhhhccccccchhh
Q 012500 151 RYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQ 230 (462)
Q Consensus 151 r~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (462)
+..+.+.++.++++..+..+.-+...+......+.+.. ++++ ..
T Consensus 224 ~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~~k-----------------------------k~~~-------k~ 267 (509)
T COG3202 224 QILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAKKK-----------------------------KKKK-------KL 267 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHhcc-----------------------------cccc-------cc
Confidence 44455555544444443333321111110000000000 0000 11
Q ss_pred hhcchhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHhCCCcc-hhh---hhhhHHHh-hhhhhhhhhHHH
Q 012500 231 LSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSY-WGPKAGYNIYHMSNA-DMM---FGGVTIVC-GIVGTISGGFIL 304 (462)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~-~~~---~~~~~~~~-~~~~~~~~g~l~ 304 (462)
.....++.+.+.++|.++.+.+...+++.+.+.+-. |-.. .+..+..+.. ... +....++. .++...+++-+.
T Consensus 268 k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~-ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~i 346 (509)
T COG3202 268 KLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSG-IKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLI 346 (509)
T ss_pred cCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-HHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 122345688889999999988888887777655543 2222 2222222211 111 12233333 345556677777
Q ss_pred hhhccc
Q 012500 305 DQMGAT 310 (462)
Q Consensus 305 d~~~~~ 310 (462)
+|.|-.
T Consensus 347 r~~GW~ 352 (509)
T COG3202 347 RRVGWF 352 (509)
T ss_pred HHhhHH
Confidence 777754
No 263
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.78 E-value=5.4e-05 Score=70.43 Aligned_cols=108 Identities=19% Similarity=0.212 Sum_probs=87.4
Q ss_pred hhHHHHHHHHHHHHHhhhccc---h------hHHHHHHHHHhhcccccccccccchhcccCCCC---CchhHHHHHHhhh
Q 012500 63 RLIGVGLSVWTFATAGCGSSF---D------FWSIAICRMLVGVGEASFISLAAPFIDDNAPVP---QKTAWLSMFYMCI 130 (462)
Q Consensus 63 ~~l~~~~~~~~~~~~~~~~~~---~------~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 130 (462)
|++.++.++..+|.++..++. + .+.++++-.+.++|.|+.-|...++.+|-++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 567888888888888844432 2 367889999999999999999999999999865 3667888999999
Q ss_pred hhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhh
Q 012500 131 PTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 170 (462)
Q Consensus 131 ~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 170 (462)
++|..+++.+.+++.+++||.+.|.+.++..++..+..+.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999998876655554433
No 264
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.77 E-value=0.00044 Score=68.39 Aligned_cols=158 Identities=12% Similarity=-0.009 Sum_probs=98.9
Q ss_pred HHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhh-ccccccchhHHHHHHHHHHHHHHHHHHhh---
Q 012500 262 GAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQM-GATISNAFKLLSAATFLGAISCLTAFCLS--- 336 (462)
Q Consensus 262 ~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 336 (462)
+++...+..|+.+..+.+.... .+........-+..+++|++.|++ |++ +.+..+.++..+...++....
T Consensus 4 YGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~-----~tIl~~~ii~~lG~~llai~a~~~ 78 (654)
T TIGR00926 4 YGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKF-----KTILYLSIVYVVGHALLSFGAIPS 78 (654)
T ss_pred eecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHhccCcc
Confidence 4455556667777777775443 222333333344567789999985 665 666666555555444443321
Q ss_pred -----hhHHHHHHHHHHHHHHHhccccceeeeeccCCcc---hhhHHHHHHHHHHhhhccccchhHHHHHHhhhc-----
Q 012500 337 -----SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN----- 403 (462)
Q Consensus 337 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g----- 403 (462)
.....+..+.+...+.+..-+...+...+.++++ .+-....+.....+. |+.+++.+.+++.+..+
T Consensus 79 ~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNi-GSlis~~i~~~l~~~~~~fg~~ 157 (654)
T TIGR00926 79 SGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINA-GSLISTIITPILRGDVGCFGCQ 157 (654)
T ss_pred cccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhcccccC
Confidence 1123455666677777778888888888877653 366777777767777 88889889999886542
Q ss_pred -chhHHHHHHHHHHHHHHHHHHH
Q 012500 404 -NWRKTTLALTSIFFLAAGIWFV 425 (462)
Q Consensus 404 -~~~~~~~~~~~~~~~~~~~~~~ 425 (462)
+|...|.+.+++.+++.+++..
T Consensus 158 ~~~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 158 DCYPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred cchHHHHHHHHHHHHHHHHHHHH
Confidence 3556666666665555555443
No 265
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.73 E-value=0.00077 Score=63.65 Aligned_cols=118 Identities=15% Similarity=0.044 Sum_probs=79.4
Q ss_pred HHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeeccCCc
Q 012500 290 IVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP 369 (462)
Q Consensus 290 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (462)
.+..++.++..|.++||+||| ..+.................. ++..+... ...+.+.......+++++....
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk-----~~L~~~~~~~~l~~~~~~~~~--~~~~~~~~-l~g~~~~~~s~~~a~vadis~~ 143 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRK-----VVLLLPLFGTILPALCLLFQG--YWFFLLLG-LSGGFSAIFSVGFAYVADISSE 143 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhh-----hhHHHHHHHHHHhHHHHHHHH--HHHhhhcc-cccchhhhhhhhhhheeeccch
Confidence 567788888999999999998 555555444444333333322 22222222 2233345566778889999988
Q ss_pred chhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHHH
Q 012500 370 SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFF 417 (462)
Q Consensus 370 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 417 (462)
+.|....|+.+...+. +..++|.+.+.+.+..| +...+.+.....+
T Consensus 144 ~~R~~~~gll~~~~~~-~~~~~p~~~~~~~~~~~-~a~~f~ia~~~~~ 189 (463)
T KOG2816|consen 144 EERSSSIGLLSGTFGA-GLVIGPALGGYLVKFLG-IALVFLIAAASGI 189 (463)
T ss_pred hHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHhcC-chHHHHHHHHHHH
Confidence 9999999999776777 88889999999998855 4455555544433
No 266
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.65 E-value=0.00034 Score=65.38 Aligned_cols=134 Identities=11% Similarity=0.055 Sum_probs=74.5
Q ss_pred hhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHH-HH--h-h-hhHHHHHHHHHHHHHHHhccccc
Q 012500 285 FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA-FC--L-S-SLYGFLALFTVGELLVFATQAPV 359 (462)
Q Consensus 285 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~-~-~~~~~~~~~~~~~~~~~~~~~~~ 359 (462)
..+...++..++++..|++..|.+.-+ +.++.+.+++.+..++. .. . + ..+.+++.-.+.|++.+. ....
T Consensus 76 viaa~slg~~i~~liF~~Ws~k~~~~k----~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n-~a~l 150 (488)
T KOG2325|consen 76 VIAASSLGHAIFSLIFGIWSNKTGSVK----KPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGN-FAVL 150 (488)
T ss_pred HHHHHHHHHHhcchhhcccccccCCcc----cCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCccc-HHHH
Confidence 335678888999999999999988521 44444444444443333 22 2 2 344455555555555442 2334
Q ss_pred eeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhh------------hcchhHHHHHHHHHHHHHHHHHH
Q 012500 360 NYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH------------VNNWRKTTLALTSIFFLAAGIWF 424 (462)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~------------~g~~~~~~~~~~~~~~~~~~~~~ 424 (462)
-.++++...+++|.++.+..+ ....+|.++||.+...+... ++.|..+-+++++..+...+...
T Consensus 151 R~Y~a~~s~~~dR~rA~a~~~-~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~ 226 (488)
T KOG2325|consen 151 RAYIADASTVEDRPRAFAATS-GGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIIL 226 (488)
T ss_pred HHHHHhccCccchHHHHHHhh-hHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHH
Confidence 556666555677888877774 33334666666444333211 12355566666666555544443
No 267
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.65 E-value=0.0014 Score=58.39 Aligned_cols=143 Identities=15% Similarity=0.071 Sum_probs=84.9
Q ss_pred HHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 012500 274 NIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLV 352 (462)
Q Consensus 274 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (462)
+.+|.+..+. .+.......+.+...+.|.+.||+||| +..+..+++-...++.- ..++.+..++.=++.|+..
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk-----~~cl~~cily~~scl~k-~~~~~~~L~~GRvlgGiaT 135 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRK-----KACLLFCILYSLSCLTK-HSSNYPVLLLGRVLGGIAT 135 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch-----HHHHHHHHHHHHHHHHH-hccccHHHHHHHHHHHHHH
Confidence 4578886655 333555666677777889999999999 77777777777766543 3456666666667777776
Q ss_pred Hhccccceeeeec-----cCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhhcc-hhHHHHHHHHHHHHHHHH
Q 012500 353 FATQAPVNYVCLH-----SVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN-WRKTTLALTSIFFLAAGI 422 (462)
Q Consensus 353 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~-~~~~~~~~~~~~~~~~~~ 422 (462)
...+...-+++.. .+|++..+...+......+.+-.+.+..+..++.|..+. ...+|.....+.+++.++
T Consensus 136 SLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~ 211 (354)
T PF05631_consen 136 SLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVL 211 (354)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHH
Confidence 6555544333332 344454555555442122332344445455566665552 345666666655544443
No 268
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.57 E-value=0.00013 Score=49.84 Aligned_cols=67 Identities=10% Similarity=-0.026 Sum_probs=52.3
Q ss_pred hHHHHHHHHHHHhhhhhhhccccccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHH
Q 012500 4 CIHVLLCLIGLILKRSMKKKKFLSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVW 72 (462)
Q Consensus 4 ~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~ 72 (462)
......+..+.+.|-......+.+.++.+.|. +.+...+..+++.|++|.+ ||+++++.++....++
T Consensus 8 ~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGi--l~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 8 FYFFYFAALGCLYPFLPLYLKQLGLSPSQIGI--LSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 34455566666677555444458999999777 9999999999999999999 9999999887766543
No 269
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.37 E-value=0.0038 Score=52.93 Aligned_cols=55 Identities=11% Similarity=0.051 Sum_probs=37.7
Q ss_pred CCchhHHHHHHhhhhhhhhhhhhHHHHh---hc--ccchHHHHHHHHHHHHHHHHHHhhc
Q 012500 117 PQKTAWLSMFYMCIPTGVALGYVYGGVV---GS--HLNWRYAFWGEAILMLPFAVLAFVI 171 (462)
Q Consensus 117 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l---~~--~~gwr~~f~~~~~~~~~~~~~~~~~ 171 (462)
|+|+....+...+.++|.++....--.- .+ .-.|++++.+.+++.++.+++..++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6788888888888888887764332111 11 2259999999998877766665555
No 270
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.33 E-value=0.0018 Score=59.20 Aligned_cols=150 Identities=16% Similarity=0.089 Sum_probs=80.7
Q ss_pred hHHHHHHHHHHHHHHHH-HHHHHHhh--HHHHHHhCCCcchhhhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHH
Q 012500 245 KVYVVNVLGYIAYNFVI-GAYSYWGP--KAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA 321 (462)
Q Consensus 245 ~~~~~~~~~~~~~~~~~-~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 321 (462)
++.|..++...+.++.. .....|.| .+..+.|+.+.....+..++.+.+++..+.+.|+.||+|-| .....+
T Consensus 41 ~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Ygs~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR-----~a~llg 115 (480)
T KOG2563|consen 41 PRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYGSSSAADWLSMIYMVVSVPFGFAAMWILDKFGLR-----TALLLG 115 (480)
T ss_pred hhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhHHHHhhcccchH-----HHHHHH
Confidence 33455555444444443 11222333 25666677333344666888899999999999999999998 666555
Q ss_pred HHHHHHHHHHHHHhh------hhH--HHHHHHHHHHHHHHhccccceeeee-ccCCcchhhHHHHHHHHHHhhhccccch
Q 012500 322 TFLGAISCLTAFCLS------SLY--GFLALFTVGELLVFATQAPVNYVCL-HSVKPSLRALSMAISTVSIHIFGDVPSS 392 (462)
Q Consensus 322 ~~~~~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 392 (462)
...-.+...+=.... ..+ .....-.+.+...-.. ...++-++ .-+++++|+++..+.. +.+-+|.+++.
T Consensus 116 t~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fi-m~lPskiA~~WF~~~qra~A~~~~v-~~n~LGvavg~ 193 (480)
T KOG2563|consen 116 TVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFI-LGLPSKIAAVWFPPDQRAIATVLGV-MGNPLGVAVGF 193 (480)
T ss_pred HHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHh-hccccHHHHhhCCcchhhhhhhHHH-hcchHHHHHHh
Confidence 555554444332221 222 2222222222222111 11222233 3478899999999984 44444666665
Q ss_pred hHHHHHHhh
Q 012500 393 PLVGVLQDH 401 (462)
Q Consensus 393 ~~~g~l~~~ 401 (462)
.+-+.+..+
T Consensus 194 llppilV~~ 202 (480)
T KOG2563|consen 194 LLPPILVPS 202 (480)
T ss_pred hccceecCC
Confidence 544444443
No 271
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.28 E-value=0.0022 Score=43.78 Aligned_cols=58 Identities=16% Similarity=0.234 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccc
Q 012500 252 LGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGAT 310 (462)
Q Consensus 252 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~ 310 (462)
..+++.......+.-+.|.|+++ .|.++.+. .+.++..+..+++.++.|.++||.+++
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~ 65 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKR 65 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence 34566677777888899999987 67887666 455778888999999999999999998
No 272
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.24 E-value=0.0093 Score=54.88 Aligned_cols=152 Identities=11% Similarity=-0.059 Sum_probs=90.9
Q ss_pred HHhhHHHHHH-hCCCcchhh--hhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 012500 266 YWGPKAGYNI-YHMSNADMM--FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFL 342 (462)
Q Consensus 266 ~~~p~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (462)
.|+..|+.+. .|++..+.. +.-+..=..++..+....+.|.++-| +.++...+.......++.+.++...+.
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Yk-----pviil~~~~~i~t~~lll~~~sv~~mq 98 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYK-----PVIILQALSYIITWLLLLFGTSVLAMQ 98 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhh-----HHHHHHHHHHHHHHHHHHHHCcHHHHH
Confidence 4555677776 777754441 11111122344556677899999988 788777777777777777778888777
Q ss_pred HHHHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHhhh-cchhHHHHHHHHHHHHHHH
Q 012500 343 ALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV-NNWRKTTLALTSIFFLAAG 421 (462)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~ 421 (462)
+.-++.|.....- ...++++-..+++++--++.+...... ..|.+++..++-.+.... .++....++......++.+
T Consensus 99 ~~q~~yg~~~a~e-vay~sYiys~v~~~~yq~vts~~raa~-l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~ 176 (412)
T PF01770_consen 99 LMQFFYGLATAAE-VAYYSYIYSVVDKEHYQKVTSYTRAAT-LVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALL 176 (412)
T ss_pred HHHHHHHHHHHHH-HHHHHHheeecCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 7777777766643 334556666677876667777765333 336666775555555422 2344444444443334444
Q ss_pred HHH
Q 012500 422 IWF 424 (462)
Q Consensus 422 ~~~ 424 (462)
..+
T Consensus 177 ~~~ 179 (412)
T PF01770_consen 177 IAL 179 (412)
T ss_pred HHH
Confidence 333
No 273
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.22 E-value=0.059 Score=50.52 Aligned_cols=173 Identities=14% Similarity=0.048 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHH--HHHHH
Q 012500 247 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLL--SAATF 323 (462)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~--~~~~~ 323 (462)
.+.+....++..+..-...+-.|.++.+.+..+-... .+...-.+..++.....|.+.||..|.+..+..+. -.+..
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~ 83 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVA 83 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHH
Confidence 4555666777777777777778888888765442222 33444556667777788999999987632111111 12222
Q ss_pred HHHHHHHHHHHhhh-----hHHHHHHH---HHHHHHHHhcccccee-----eeeccC--CcchhhHHHHHHHHHHhhhcc
Q 012500 324 LGAISCLTAFCLSS-----LYGFLALF---TVGELLVFATQAPVNY-----VCLHSV--KPSLRALSMAISTVSIHIFGD 388 (462)
Q Consensus 324 ~~~~~~~~~~~~~~-----~~~~~~~~---~~~~~~~~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~~~~~g~ 388 (462)
+.+.........+. .+....++ .+.+............ .+.... +++.....++... -...+..
T Consensus 84 ~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mR-RIDL~ck 162 (432)
T PF06963_consen 84 ASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMR-RIDLFCK 162 (432)
T ss_pred HHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHH-HHHHHHH
Confidence 22222222222111 12222111 1222211111111111 111111 2344455555542 4455688
Q ss_pred ccchhHHHHHHhhhcchhHHHHHHHHHHHHHHH
Q 012500 389 VPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAG 421 (462)
Q Consensus 389 ~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 421 (462)
.++|.+.|.+.+..+ ......+.+...++...
T Consensus 163 llaPl~vG~l~t~~s-~~~~~~~i~~~N~~S~~ 194 (432)
T PF06963_consen 163 LLAPLFVGLLMTFAS-PVIAAIFIAGWNLASVF 194 (432)
T ss_pred HHHHHHHHHHhhccC-HHHHHHHHHHHHHHHHH
Confidence 899999999998765 44555555544444443
No 274
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.21 E-value=0.0027 Score=60.13 Aligned_cols=147 Identities=14% Similarity=0.030 Sum_probs=86.1
Q ss_pred HHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhh----hhHHHHHH
Q 012500 270 KAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS----SLYGFLAL 344 (462)
Q Consensus 270 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 344 (462)
.++++.++.++.+. .+..+..+. -...++.|.++|-+.-...+++..++++..+...........+ +.....++
T Consensus 14 ~~l~~~l~ls~~~~~~~~~~~~lP-w~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 92 (433)
T PF03092_consen 14 PFLKDDLGLSPAQLQRLSSLASLP-WSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVL 92 (433)
T ss_pred HHHHHHcCCCHHHHHHHHHHHhCc-hHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHH
Confidence 47788889997655 333333332 3356788999999863333333666666666644333333222 33344445
Q ss_pred HHHHHHHHHhccccceeeeeccCCc--chhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHHHHH
Q 012500 345 FTVGELLVFATQAPVNYVCLHSVKP--SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLA 419 (462)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 419 (462)
+++..++....-...-+.+.|.... +.++.-.+....... +|++++..+.|.+.+..+ ++..+.+...+..+.
T Consensus 93 l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~-~G~lv~~~l~G~l~~~~~-~~~~f~i~~~~~~l~ 167 (433)
T PF03092_consen 93 LFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRS-VGSLVGSLLSGPLLDSFG-PQGVFLISAALPLLM 167 (433)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHH-HHHHHHHHhhhhhhhcCC-CeEEehHHHHHHHHH
Confidence 5555555555555555555555432 337777777754444 488999999999998865 555565555443333
No 275
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.92 E-value=0.00013 Score=70.48 Aligned_cols=124 Identities=10% Similarity=0.005 Sum_probs=1.5
Q ss_pred HHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhh------------
Q 012500 270 KAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS------------ 336 (462)
Q Consensus 270 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 336 (462)
.-++..++++..+. .+.+...++.++..++..++.+|..|. +++..+.++.++..++....+
T Consensus 27 ttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrp-----rwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~ 101 (539)
T PF03137_consen 27 TTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRP-----RWIGIGALLMGLGSLLFALPHFLSGPYSYEEAS 101 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc-----ceeeecHHHHHHHHHHHhccHhhcCCCcccccc
Confidence 35677888887666 455777888888888888888776555 666666655555444332210
Q ss_pred ----------------------------------h----hHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhHHHHH
Q 012500 337 ----------------------------------S----LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAI 378 (462)
Q Consensus 337 ----------------------------------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (462)
. .+.+++..++.|++....++...+++-|.++++..+...|+
T Consensus 102 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi 181 (539)
T PF03137_consen 102 NSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGI 181 (539)
T ss_dssp --------------------------------------------------SSS---------------------------
T ss_pred ccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhh
Confidence 0 11223333444455555566667777777877777777777
Q ss_pred HHHHHhhhccccchhHHHHHH
Q 012500 379 STVSIHIFGDVPSSPLVGVLQ 399 (462)
Q Consensus 379 ~~~~~~~~g~~~~~~~~g~l~ 399 (462)
.. ....+|-++|-.+++...
T Consensus 182 ~~-~~~~lGPa~Gf~lg~~~L 201 (539)
T PF03137_consen 182 LY-AMSILGPALGFLLGSFCL 201 (539)
T ss_dssp ---------------------
T ss_pred hh-HHhhccHHHHHHHHHHHH
Confidence 74 444446655555555443
No 276
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.81 E-value=0.037 Score=43.70 Aligned_cols=101 Identities=7% Similarity=-0.059 Sum_probs=73.4
Q ss_pred hhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeecc
Q 012500 287 GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHS 366 (462)
Q Consensus 287 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (462)
++......+..++.+.+.+++|.| +.++++.+.-...... ...++.+..+....+.|++.+..+.....++.+.
T Consensus 44 ai~Y~~~~~s~l~~P~iv~~lg~K-----~sm~lg~~~y~~y~~~-~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 44 AILYGSFAISCLFAPSIVNKLGPK-----WSMILGSLGYAIYIAS-FFYPNSYTLYPASALLGFGAALLWTAQGTYLTSY 117 (156)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhhH-----HHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence 455666677788889999999998 7776666655543333 3455677778888889999998888888888887
Q ss_pred CCcchhhHHHHHHHHHHhhhccccchhH
Q 012500 367 VKPSLRALSMAISTVSIHIFGDVPSSPL 394 (462)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 394 (462)
..++.+++-.++.....+. +.++|..+
T Consensus 118 s~~~~~~~~~~ifw~i~~~-s~i~G~~~ 144 (156)
T PF05978_consen 118 STEETIGRNTGIFWAIFQS-SLIFGNLF 144 (156)
T ss_pred CCHHHHhhHHHHHHHHHHH-HHHHHHHH
Confidence 7778888888887555444 55555533
No 277
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=96.46 E-value=0.00052 Score=61.80 Aligned_cols=101 Identities=15% Similarity=0.012 Sum_probs=2.7
Q ss_pred hhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHH--HHHHHHHHHH----------HHhhhhHHHHHHHHHHHHHHHh
Q 012500 287 GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT--FLGAISCLTA----------FCLSSLYGFLALFTVGELLVFA 354 (462)
Q Consensus 287 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 354 (462)
..+.++..+|+.+.++..-+..++ + .+..... ++.....++. ...++.+..++...++++..|-
T Consensus 189 l~Fn~gD~iGR~l~~~~~~~~~~~--~--~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 189 LLFNLGDFIGRFLASWPRWPGPSP--R--WLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHhcchhcceeEeccccc--c--cHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 567888899999887642111111 0 2222111 1111111111 1223455666677777777776
Q ss_pred ccccceeeeeccCCcchhhHHHHHHHHHHhhhccccch
Q 012500 355 TQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 392 (462)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 392 (462)
..........+.+++++|..+..+....... |-.+|.
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~-Gl~~Gs 301 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSF-GLFIGS 301 (309)
T ss_dssp --HHHH--------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 6666677777888888787776666444443 666665
No 278
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.14 E-value=0.046 Score=50.42 Aligned_cols=146 Identities=10% Similarity=-0.005 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHH
Q 012500 249 VNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI 327 (462)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 327 (462)
......+...+....=..++|.|+++. |.+..-. ......-+.+++..++.|..+||...|..++|+.+.......++
T Consensus 36 ~v~~ia~Gvqf~wA~elsy~tPyl~~l-Gvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~ 114 (498)
T KOG0637|consen 36 SVASIAAGVQFGWALELSYLTPYLQSL-GVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAV 114 (498)
T ss_pred HHHHHHHHHHHHHHHHhccccHHHHHc-CCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHH
Confidence 333334455555656667888888874 4543222 22233445566778889999998766665556777666665555
Q ss_pred HHHHHHHhhh-----------------hHHHHHHHHHHHHHHHhccccceeeeeccCCcchhhH-HHHHHHHHHhhhccc
Q 012500 328 SCLTAFCLSS-----------------LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRAL-SMAISTVSIHIFGDV 389 (462)
Q Consensus 328 ~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~ 389 (462)
.+.+..+..+ ....++.+.+.=+.......+.-++..+...++++.+ +++....+... |+.
T Consensus 115 ~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~av-Gnv 193 (498)
T KOG0637|consen 115 SLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAV-GNV 193 (498)
T ss_pred HHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHh-cce
Confidence 5554443221 1112233333444555778888888888887766666 88888555555 887
Q ss_pred cchhHHH
Q 012500 390 PSSPLVG 396 (462)
Q Consensus 390 ~~~~~~g 396 (462)
+|-.+.+
T Consensus 194 LGY~~g~ 200 (498)
T KOG0637|consen 194 LGYALGS 200 (498)
T ss_pred eeeeccc
Confidence 7765444
No 279
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.00 E-value=0.28 Score=46.73 Aligned_cols=41 Identities=5% Similarity=-0.139 Sum_probs=30.9
Q ss_pred cceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHH
Q 012500 358 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 399 (462)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~ 399 (462)
....+++|...+++..+-.++.....+. |..+++.+..++.
T Consensus 149 lFW~fandi~t~~qakRfy~l~~~ganl-g~i~sg~~~~~~~ 189 (472)
T TIGR00769 149 LFWGFANQITTIDEAKRFYALFGLGANV-ALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 3455666777778888999999666665 8888888887776
No 280
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=95.92 E-value=0.2 Score=44.71 Aligned_cols=113 Identities=17% Similarity=0.112 Sum_probs=69.6
Q ss_pred hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHhcccccee
Q 012500 284 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS--SLYGFLALFTVGELLVFATQAPVNY 361 (462)
Q Consensus 284 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (462)
.......+...++.+..|.+.||.||| +.................... ..+.........+++.+...+....
T Consensus 43 ~~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 117 (338)
T COG0477 43 LLLSAFFLGYAIGSLLAGPLGDRYGRR-----KVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASA 117 (338)
T ss_pred HHHHHHHHHHHHHhhhhhhccccccch-----HHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 444556667777778999999999887 444444432222222222222 2444444444456666666667777
Q ss_pred eeeccCCc-chhhHHHHHHHHHHhhhccccchhHHHHHHhh
Q 012500 362 VCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 401 (462)
Q Consensus 362 ~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~ 401 (462)
...+..|+ +.|+...+.........+..++|.+.+.+.+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 118 LLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777776 57888888875534444777788777766665
No 281
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=95.90 E-value=0.27 Score=45.15 Aligned_cols=104 Identities=15% Similarity=0.044 Sum_probs=56.9
Q ss_pred HHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHH------HHhhhhHHHHHHHHHHHHHHHhccccceee
Q 012500 289 TIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA------FCLSSLYGFLALFTVGELLVFATQAPVNYV 362 (462)
Q Consensus 289 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (462)
..+...+|.....++.++-+|.. ......=.+......+. ....+.+..+....++++..|-.......+
T Consensus 292 fN~~d~vG~~~a~~~~~~~~r~l----~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYltsl~m~~ 367 (406)
T KOG1479|consen 292 FNVFDLIGSILAALLTWPDPRKL----TIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTSLIMMY 367 (406)
T ss_pred hHHHHHhhhhhhhcccCCCCcee----hHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhhheehh
Confidence 66777777666655544433320 11111112222222211 123456667777888888888666677778
Q ss_pred eeccCCcchhhHHHHHHHHHHhhhccccchhHHHHH
Q 012500 363 CLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 398 (462)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l 398 (462)
..+.++++++..+-.+....... |-+.|. +.+++
T Consensus 368 aPk~v~~~e~e~aG~~m~~fl~~-Gl~~G~-~~s~l 401 (406)
T KOG1479|consen 368 APKQVKPSEKEAAGNLMVFFLVG-GLALGS-LLSWV 401 (406)
T ss_pred cCCCCChHHHHHHHHHHHHHHHH-HHHHhh-HHHHH
Confidence 88888887776666665333333 555555 44444
No 282
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.74 E-value=0.063 Score=53.13 Aligned_cols=64 Identities=8% Similarity=0.026 Sum_probs=39.3
Q ss_pred HHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHH
Q 012500 263 AYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT 331 (462)
Q Consensus 263 ~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (462)
++....-.-.++.++++.... .+....-++..+......+...|..|. +++..+.++.++..++
T Consensus 114 ~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrP-----r~Ig~G~~~m~lgsll 178 (735)
T KOG3626|consen 114 GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRP-----RWIGIGLVLMGLGSLL 178 (735)
T ss_pred hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCcc-----ceeeechhHHHHHHHH
Confidence 444334445677788886554 444667777777777777777777665 5555555544444333
No 283
>PRK03612 spermidine synthase; Provisional
Probab=95.58 E-value=0.51 Score=45.94 Aligned_cols=61 Identities=10% Similarity=-0.021 Sum_probs=33.2
Q ss_pred HHHHHHHHHhccccceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHh-hhcchhH
Q 012500 345 FTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD-HVNNWRK 407 (462)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~-~~g~~~~ 407 (462)
.++.++..|...|...-...+.. .+..+...|-. ...+.+|+++|+.+.+++.- ..|....
T Consensus 117 ~~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~l-y~~ntlGa~~G~l~~~~vLlp~lG~~~t 178 (521)
T PRK03612 117 VLLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATV-LAADYLGALVGGLAFPFLLLPRLGLIRT 178 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhh-HhHHhHHHHHHHHHHHHHHHHhcchHHH
Confidence 34455666666555444433322 22234455555 35555688888888877654 5564333
No 284
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.56 E-value=0.029 Score=51.66 Aligned_cols=109 Identities=9% Similarity=0.021 Sum_probs=79.6
Q ss_pred hhhHHHHHHHHHhhhhhhccccccCCchhHHHHHHHH---HHHHHhhhccchhHHHHHHHHHhhcccccccccccchhcc
Q 012500 36 SVNVLEFTVTQLVCSSHHCSQCSHNPFRLIGVGLSVW---TFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDD 112 (462)
Q Consensus 36 s~~~~~~~~~~~~~~~~~g~ldr~Grr~~l~~~~~~~---~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 112 (462)
-+....|.+|..++.--...+ |+.+-+++.+--.+. .+...+.-+.+|.|..++.-+..|+..|..+......+.|
T Consensus 284 ~~Y~~~YQ~GVFISRSS~~~~-rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~ 362 (402)
T PF02487_consen 284 RWYQLLYQLGVFISRSSLPFF-RIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISE 362 (402)
T ss_pred HHHHHHHHHHHhhhhcceeee-ehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHh
Confidence 348888888877775544333 232222222222222 2222333356889999999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhh
Q 012500 113 NAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG 145 (462)
Q Consensus 113 ~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~ 145 (462)
-.|+++|..+++....+-+.|..++..++-.+-
T Consensus 363 ~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 363 EVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred cCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999999999999999999999999998876654
No 285
>PRK03612 spermidine synthase; Provisional
Probab=95.11 E-value=0.23 Score=48.27 Aligned_cols=136 Identities=11% Similarity=-0.129 Sum_probs=76.5
Q ss_pred cccccccccchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHH--HH-HHHHhh----hccchh-HHHHHHHHHhh
Q 012500 26 LSLRKLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSV--WT-FATAGC----GSSFDF-WSIAICRMLVG 96 (462)
Q Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~--~~-~~~~~~----~~~~~~-~~l~~~r~l~G 96 (462)
++.+..+ ++.+.+.+..|..+++.+++++ ++.-++.. ..-+.+ .+ ++..+. ++.... ..++..-++.|
T Consensus 45 ~G~s~~~--~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 121 (521)
T PRK03612 45 LGDSVTQ--FSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIG 121 (521)
T ss_pred hCchHHH--HHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444 5669999999999999998887 43222221 111111 11 111111 111111 12233445667
Q ss_pred cccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhh-cccchHHHHHHHHHHHHHHH
Q 012500 97 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-SHLNWRYAFWGEAILMLPFA 165 (462)
Q Consensus 97 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~-~~~gwr~~f~~~~~~~~~~~ 165 (462)
+..|...|....+..+... ++-++..|-......+|.++|.++.+++. ..+|-....++.+.+.++++
T Consensus 122 ~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a 190 (521)
T PRK03612 122 LLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAA 190 (521)
T ss_pred HHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 7777777776666654332 34567788888888999999998877654 45664444444444444433
No 286
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=94.54 E-value=0.11 Score=46.74 Aligned_cols=126 Identities=11% Similarity=-0.045 Sum_probs=69.9
Q ss_pred hHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHh------hhccc------hhHHHHHHHH----Hhhcccc
Q 012500 38 NVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAG------CGSSF------DFWSIAICRM----LVGVGEA 100 (462)
Q Consensus 38 ~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~------~~~~~------~~~~l~~~r~----l~G~~~g 100 (462)
....-....++.+++.|.. |+..|+|++...+.+.-++..+ ..+.+ ++..+..+-+ +..++.=
T Consensus 68 yglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~L 147 (503)
T KOG2601|consen 68 YGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVL 147 (503)
T ss_pred HHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHH
Confidence 4444455567888888999 9999999887766554333322 22322 3443333222 2223222
Q ss_pred cccccccchhcccC----CCCCchhHH---HHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHH
Q 012500 101 SFISLAAPFIDDNA----PVPQKTAWL---SMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLP 163 (462)
Q Consensus 101 ~~~~~~~~~i~~~~----~~~~r~~~~---~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~ 163 (462)
........+-.||. ..+.+.... +..-..-..-.++.|.+.|.+.+..+-|..-.+.++.+++
T Consensus 148 as~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 148 ASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred HHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 22222223334554 234444443 4444444556788899999988887777755555555444
No 287
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=94.49 E-value=0.36 Score=33.41 Aligned_cols=75 Identities=16% Similarity=0.072 Sum_probs=52.1
Q ss_pred HHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhh
Q 012500 260 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL 338 (462)
Q Consensus 260 ~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (462)
.-+.+...+|...+ ..+++..+. .+.+...++..+|.+...++.++..++ +.+..+.+............++.
T Consensus 7 gRFayTplLP~M~~-~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~ma~~~~~ 80 (85)
T PF06779_consen 7 GRFAYTPLLPLMQA-DGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR-----RLLRAGLLLTVLSTAAMALTHSF 80 (85)
T ss_pred HHHHHHhHhHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH-----HHHHHHHHHHHHHHHHHHHHhch
Confidence 34455566775544 577886665 566888999999999999988886655 66667776666666666655554
Q ss_pred HH
Q 012500 339 YG 340 (462)
Q Consensus 339 ~~ 340 (462)
+.
T Consensus 81 ~~ 82 (85)
T PF06779_consen 81 WL 82 (85)
T ss_pred HH
Confidence 43
No 288
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.01 E-value=0.11 Score=48.32 Aligned_cols=86 Identities=15% Similarity=0.055 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHHHhccccceeeeeccCCcc---hhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHH
Q 012500 339 YGFLALFTVGELLVFATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 415 (462)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 415 (462)
...++.+.+..++.|+.-+....+..+.++++ .|.+.....+...+. |..+++...+++.++.| |...|.+..+.
T Consensus 34 ~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~-G~~~~~~~~~~i~~~~~-~~~~f~i~~~~ 111 (372)
T PF00854_consen 34 GLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINI-GSLFSPTLVPYIQQNYG-WFLGFGIPAIG 111 (372)
T ss_dssp CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHH-HHHHHHHCCCHHHHCS--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhh-hhHhhcccchhhccccc-hhhhhhHHHHH
Confidence 45677777888899988888888888888775 466667777777787 99999989999998876 87888888877
Q ss_pred HHHHHHHHHHH
Q 012500 416 FFLAAGIWFVG 426 (462)
Q Consensus 416 ~~~~~~~~~~~ 426 (462)
.+++.+.++..
T Consensus 112 ~~~~~~~f~~~ 122 (372)
T PF00854_consen 112 MLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHHhC
Confidence 77776666543
No 289
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=93.69 E-value=1.4 Score=40.63 Aligned_cols=34 Identities=9% Similarity=-0.055 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHhccccceeeeeccCCcchhh
Q 012500 339 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRA 373 (462)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (462)
...++.+.+.+.+.+..++..+.. ...+|+++..
T Consensus 118 ~vt~~~vv~~~~a~a~~qgs~~G~-a~~~P~~ytq 151 (406)
T KOG1479|consen 118 LVTLIIVVLLNLANAVVQGSLYGL-AGLFPSEYTQ 151 (406)
T ss_pred HHHHHHHHHHhhhhhhhccchhhh-hhcCCHHHHH
Confidence 344455555666666666655554 3456776543
No 290
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=92.72 E-value=4 Score=39.30 Aligned_cols=40 Identities=10% Similarity=-0.046 Sum_probs=28.3
Q ss_pred eeeeeccCCcchhhHHHHHHHHHHhhhccccchhHHHHHHh
Q 012500 360 NYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 400 (462)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~ 400 (462)
..++.+....++..+-.++.....+. |.+++..+..++.+
T Consensus 166 W~fAN~itt~~eAKRfYpl~g~gani-gli~sG~~~~~~~~ 205 (491)
T PF03219_consen 166 WGFANEITTVEEAKRFYPLFGLGANI-GLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 34455556668888999999766666 77777777766666
No 291
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=91.44 E-value=0.99 Score=42.67 Aligned_cols=36 Identities=19% Similarity=0.120 Sum_probs=20.1
Q ss_pred ceeeeeccCCcchhhHHHHHHHHHHhhhccccchhHH
Q 012500 359 VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV 395 (462)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 395 (462)
+-........++.++-|........+. |.+++-.++
T Consensus 139 VDGWALT~Ls~~n~~~ASTcqtvG~~~-Gyfls~tvF 174 (544)
T PF13000_consen 139 VDGWALTMLSPENVGYASTCQTVGQTA-GYFLSFTVF 174 (544)
T ss_pred eehhhhhhcChhhcchHHHHHHhHhhh-hHHHHHHHH
Confidence 344455566677777766665434444 666554444
No 292
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=89.81 E-value=14 Score=33.31 Aligned_cols=91 Identities=7% Similarity=0.099 Sum_probs=60.2
Q ss_pred hhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccccccchhcccCCC--CCc-------
Q 012500 50 SSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPV--PQK------- 119 (462)
Q Consensus 50 ~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~--~~r------- 119 (462)
+.+.+.+ .++|-|+++.++...+...-. .=+=+.+..++-.-...|++.+..+..--+|+++.-.. ++|
T Consensus 75 ~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA-~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~~q~~~~ 153 (390)
T KOG3097|consen 75 SMFMPLLIRFLGTKWTMVLAVFPYALYIA-ANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRGEQAGDG 153 (390)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHH-hhcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHhhhhhccCc
Confidence 3333455 777999999998877765432 22346788899999999999999999888888776542 334
Q ss_pred --hhHHHHHHhhhhhhhhhhhhHH
Q 012500 120 --TAWLSMFYMCIPTGVALGYVYG 141 (462)
Q Consensus 120 --~~~~~~~~~~~~~G~~~g~~~~ 141 (462)
.+..+.+.+.+.-+...|..++
T Consensus 154 ~~~~ffg~Ffii~~~~qv~gn~is 177 (390)
T KOG3097|consen 154 MKVRFFGEFFIIFQCAQVWGNLIS 177 (390)
T ss_pred eeeeehhHHHHHHHHHHHHHHHHH
Confidence 3444555444444444444333
No 293
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=89.54 E-value=2.3 Score=36.73 Aligned_cols=138 Identities=13% Similarity=-0.030 Sum_probs=81.8
Q ss_pred cccccchhhHHHHHHHHHhhhhhhccc-cccCCch--hHHHHHHHHHHHHHhhhc----cc---hhHHHHHHHHHhhccc
Q 012500 30 KLAAGSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFR--LIGVGLSVWTFATAGCGS----SF---DFWSIAICRMLVGVGE 99 (462)
Q Consensus 30 ~~~~~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~--~l~~~~~~~~~~~~~~~~----~~---~~~~l~~~r~l~G~~~ 99 (462)
+.+.-.+.+.+.++++..+++-+..++ .|-..|- .+.+..++.++...+... ++ +...=+++-.+.-.+.
T Consensus 279 ~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cv 358 (454)
T KOG4332|consen 279 DEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACV 358 (454)
T ss_pred cccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHH
Confidence 334444669999999999999999888 6654443 444444444443333222 22 2222244555556677
Q ss_pred ccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHH
Q 012500 100 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVL 167 (462)
Q Consensus 100 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~ 167 (462)
|..+|....+-+.+.|++.|...+.++..-.++=..++-..-..-....+=|..|-+..+...+..+.
T Consensus 359 GlfwPSimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 359 GLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred hhcchHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHH
Confidence 88999999999999999999998888766544322211110000001134567777776655544443
No 294
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.25 E-value=9.1 Score=36.43 Aligned_cols=99 Identities=9% Similarity=-0.102 Sum_probs=73.9
Q ss_pred hhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeecc
Q 012500 287 GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHS 366 (462)
Q Consensus 287 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (462)
++......+..++++.+.|+++.| +.++.+...-...-.. +...|.+..+..-.+.|++.+..+...-.+.++.
T Consensus 57 aiiY~~ftv~~l~~psiv~~i~~K-----~~lv~ga~~y~~f~~g-fl~~N~y~~yfssallG~Gaallw~GqG~ylt~~ 130 (461)
T KOG3098|consen 57 AIIYAFFTVSCLFAPSIVNFLGPK-----WALVIGATCYAAFPLG-FLFPNSYYLYFSSALLGFGAALLWTGQGGYLTSN 130 (461)
T ss_pred HHHHHHHHHHHHhhHHHHHHhhHH-----HHHHHHhHHHHHHHHH-HHhcchHHHHHHHHHhhhhHHheecccceehhhc
Confidence 566677788899999999999997 6666655555444333 3445677888888999999999899888899998
Q ss_pred CCcchhhHHHHHHHHHHhhhccccch
Q 012500 367 VKPSLRALSMAISTVSIHIFGDVPSS 392 (462)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~g~~~~~ 392 (462)
..++.+.+..++....... +.++|.
T Consensus 131 st~~tie~Nisi~Wai~~~-~li~Gg 155 (461)
T KOG3098|consen 131 STRETIERNISIFWAIGQS-SLIIGG 155 (461)
T ss_pred CChhhHHHHHHHHHHHHHH-HHHhhh
Confidence 8888888877777655444 555553
No 295
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=88.93 E-value=4.2 Score=37.27 Aligned_cols=63 Identities=13% Similarity=0.036 Sum_probs=32.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHh-----hhcccc
Q 012500 245 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILD-----QMGATI 311 (462)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d-----~~~~~~ 311 (462)
+++..+...+...+....... -+|.+++. .+.|-.+. .+.....-- .--++...++| |+|||+
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~fS~ay~P~--sLKllWaPiVDs~y~k~~Grrk 99 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAIFSFAYWPF--SLKLLWAPIVDSVYSKRFGRRK 99 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhhhhhhhhHH--HHHHHHHhhhHHHHHHhhcccc
Confidence 344445554556555554444 78888774 45553332 222111111 12345556666 899884
No 296
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=88.39 E-value=3.2 Score=39.46 Aligned_cols=108 Identities=14% Similarity=0.044 Sum_probs=76.0
Q ss_pred hhHHHHHHHHHhhhhhhccccccCCc--hhHHHH--HHHHHHHHHhhh---------ccchhHHHHHHHHHhhccccccc
Q 012500 37 VNVLEFTVTQLVCSSHHCSQCSHNPF--RLIGVG--LSVWTFATAGCG---------SSFDFWSIAICRMLVGVGEASFI 103 (462)
Q Consensus 37 ~~~~~~~~~~~~~~~~~g~ldr~Grr--~~l~~~--~~~~~~~~~~~~---------~~~~~~~l~~~r~l~G~~~g~~~ 103 (462)
+....|.+|-.++..+..+...-++| ++.+.. =+++.-..++|. +-++-+..++..++.|+..|-..
T Consensus 311 i~~~~fNvgD~vGR~~~~~~~~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy~~ 390 (437)
T TIGR00939 311 ICFLLFNLFDWLGRSLTSKFMWPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGYLG 390 (437)
T ss_pred HHHHHHHHHHHHHhhhhheeEeeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhHHH
Confidence 46778888888888766554111222 333322 222333333333 22466677778999999999999
Q ss_pred ccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHh
Q 012500 104 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 144 (462)
Q Consensus 104 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 144 (462)
+.++.+..+..+++||..+..+...+..+|..+|..++-.+
T Consensus 391 s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 391 SLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888775443
No 297
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=84.89 E-value=17 Score=36.08 Aligned_cols=165 Identities=12% Similarity=-0.003 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHH
Q 012500 255 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 333 (462)
Q Consensus 255 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (462)
.+-...++++...+-.|+...++.+...+ -.............+.+++++|-+--|. +.+.++.++......++.
T Consensus 47 ~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry----~tI~~~s~i~~~G~~~lt 122 (571)
T KOG1237|consen 47 VLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRY----FTINIGSLISLLGLFGLT 122 (571)
T ss_pred HHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHH
Confidence 33344455555556667777777775333 2223344444556688899999875442 445444444333322222
Q ss_pred Hhh----------------------h---hHHHHHHHHHHHHHHHhccccceeeeeccCC---c-chhh--HHHHHHHHH
Q 012500 334 CLS----------------------S---LYGFLALFTVGELLVFATQAPVNYVCLHSVK---P-SLRA--LSMAISTVS 382 (462)
Q Consensus 334 ~~~----------------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~--~~~~~~~~~ 382 (462)
... + .......+.+...+.++.-+...++-.+.++ + +.+. .-.......
T Consensus 123 ~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~ 202 (571)
T KOG1237|consen 123 LSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFS 202 (571)
T ss_pred HHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHH
Confidence 110 0 0122333333444555666777777777777 3 2222 334444344
Q ss_pred HhhhccccchhHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHH
Q 012500 383 IHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFV 425 (462)
Q Consensus 383 ~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 425 (462)
.+. |..++..+.-++.|..+ |...+-....+..++.++++.
T Consensus 203 ~~~-g~l~a~t~~vyiq~~~~-w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 203 QNG-GALLAQTVLVYIQDNVG-WKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred HHH-HHHHHHHHHHhhhhccc-ceeeccHHHHHHHHHHHHHHc
Confidence 444 66666666666666544 777777776666666555543
No 298
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=81.80 E-value=5.8 Score=28.47 Aligned_cols=34 Identities=18% Similarity=0.276 Sum_probs=23.5
Q ss_pred chhhHHHHHHHHHHhhhccccchhHHHHHHhhhcc
Q 012500 370 SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN 404 (462)
Q Consensus 370 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~ 404 (462)
+.++.+.++- ...-.+++++.....||+.|++-+
T Consensus 38 s~k~~~~a~k-lssefIsGilVGa~iG~llD~~ag 71 (116)
T COG5336 38 SIKGYAQAFK-LSSEFISGILVGAGIGWLLDKFAG 71 (116)
T ss_pred hhhhhhhhHH-HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4566777766 455555666666689999998754
No 299
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=79.64 E-value=4 Score=36.13 Aligned_cols=109 Identities=7% Similarity=-0.048 Sum_probs=76.9
Q ss_pred hhhHHHHHHHHHhhhhhhccc--cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccccccchhccc
Q 012500 36 SVNVLEFTVTQLVCSSHHCSQ--CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDN 113 (462)
Q Consensus 36 s~~~~~~~~~~~~~~~~~g~l--dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~ 113 (462)
-|....|.+|..+..--...+ +..---.++-.-.+++.+...+..+.++++..++.-+.-|+-.|..+....--+.+-
T Consensus 291 RwyqvlYQlGVFiSRSS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e 370 (409)
T KOG3880|consen 291 RWYQVLYQLGVFISRSSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKE 370 (409)
T ss_pred hhhheeeeeeEEEEeccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhc
Confidence 358888888766554433333 111000122233445555566667789999999999999998888888877778887
Q ss_pred CCCCCchhHHHHHHhhhhhhhhhhhhHHHHh
Q 012500 114 APVPQKTAWLSMFYMCIPTGVALGYVYGGVV 144 (462)
Q Consensus 114 ~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 144 (462)
.++++|-.+++....+-++|..++..++-.+
T Consensus 371 ~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 371 TEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred CCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 8889999999999999999988887776544
No 300
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=79.27 E-value=29 Score=34.08 Aligned_cols=23 Identities=4% Similarity=0.185 Sum_probs=12.5
Q ss_pred hHHHhhhhhhhhhhHHHhhhccc
Q 012500 288 VTIVCGIVGTISGGFILDQMGAT 310 (462)
Q Consensus 288 ~~~~~~~~~~~~~g~l~d~~~~~ 310 (462)
...+.+.++...++++-..++.+
T Consensus 305 ~y~~~~~iaGy~S~~~yk~~~g~ 327 (521)
T PF02990_consen 305 LYALTSFIAGYVSARLYKSFGGK 327 (521)
T ss_pred HHHHHhhHHHHHHHHHHHHcCCC
Confidence 34455555555555555555554
No 301
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=78.26 E-value=14 Score=31.09 Aligned_cols=43 Identities=12% Similarity=0.173 Sum_probs=25.5
Q ss_pred ccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHH
Q 012500 112 DNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAF 154 (462)
Q Consensus 112 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f 154 (462)
|+..++++.+.-.......-++..+|..+++.+.+..+.+..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~~al~ 195 (209)
T PF06912_consen 153 RYLRGKDRALRRALRYLLIILSFFIGAILGALLYRRLGFWALL 195 (209)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 3333344434445555566667777777788887777753333
No 302
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=76.19 E-value=9.7 Score=35.65 Aligned_cols=18 Identities=28% Similarity=0.462 Sum_probs=10.3
Q ss_pred HhhhhhhhhhhHHHhhhc
Q 012500 291 VCGIVGTISGGFILDQMG 308 (462)
Q Consensus 291 ~~~~~~~~~~g~l~d~~~ 308 (462)
+..++.....|++..|.+
T Consensus 6 i~~i~~ii~~G~~~~~~~ 23 (385)
T PF03547_consen 6 ILPIFLIILLGYLLGRFG 23 (385)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 334445556677777654
No 303
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=72.66 E-value=52 Score=28.94 Aligned_cols=81 Identities=10% Similarity=0.058 Sum_probs=41.1
Q ss_pred hhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchhhhhhhHHHhhhhhhhhhhHHHhhhccccccc
Q 012500 235 SQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNA 314 (462)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 314 (462)
++..+++.++|+.+..................|.|. .++.-+.+.++..-+-+...+|.++ +-||+.|-
T Consensus 59 ~~~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn----~g~~leaSLGY~InPL~~VllG~lf---lkErls~~---- 127 (293)
T COG2962 59 WRELKQLLKQPKTLLMLALTALLIGLNWWLFIWAVN----NGHVLEASLGYFINPLVNVLLGRLF---LKERLSRL---- 127 (293)
T ss_pred hHHHHHHHhCcHHHHHHHHHHHHHHHHHHHhheecC----CCchhHHHhHHHHHHHHHHHHHHHH---HHhhccHH----
Confidence 455677888887777666555555555555555542 2222222333333333333444443 55777665
Q ss_pred hhHHHHHHHHHHH
Q 012500 315 FKLLSAATFLGAI 327 (462)
Q Consensus 315 ~~~~~~~~~~~~~ 327 (462)
..+......+.+
T Consensus 128 -Q~iAV~lA~~GV 139 (293)
T COG2962 128 -QWIAVGLAAAGV 139 (293)
T ss_pred -HHHHHHHHHHHH
Confidence 444444443333
No 304
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=70.77 E-value=1.1 Score=40.38 Aligned_cols=106 Identities=13% Similarity=0.043 Sum_probs=3.7
Q ss_pred hHHHHHHHHHhhhhhhccc--cccCCchhHHHH--HHHHHHHHHhh----------hccchhHHHHHHHHHhhccccccc
Q 012500 38 NVLEFTVTQLVCSSHHCSQ--CSHNPFRLIGVG--LSVWTFATAGC----------GSSFDFWSIAICRMLVGVGEASFI 103 (462)
Q Consensus 38 ~~~~~~~~~~~~~~~~g~l--dr~Grr~~l~~~--~~~~~~~~~~~----------~~~~~~~~l~~~r~l~G~~~g~~~ 103 (462)
....|.++-.+|..+.++. ....+|++...+ =+++.-..++| .+.+|-+..++.-++.|+..|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 5667888888888877765 212455444332 12222222222 123455677888899999999999
Q ss_pred ccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHH
Q 012500 104 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV 143 (462)
Q Consensus 104 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~ 143 (462)
+..+.+..+..++++|..+-.+......+|..+|..++-.
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp HHHH------------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999888898888876543
No 305
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=68.71 E-value=11 Score=34.22 Aligned_cols=95 Identities=14% Similarity=-0.002 Sum_probs=73.3
Q ss_pred chhhHHHHHHHHHhhhhhhccc-cccCCch--hHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhcccccccccccchhc
Q 012500 35 SSVNVLEFTVTQLVCSSHHCSQ-CSHNPFR--LIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFID 111 (462)
Q Consensus 35 ~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~--~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 111 (462)
.|..-....+..++..+..|.+ -++.|.. .+..+.+.-+...++++.++++|..+++-++.+.-.....+.+..-++
T Consensus 273 NG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA 352 (433)
T KOG3810|consen 273 NGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIA 352 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHH
Confidence 4557777778888889999999 6665553 455566666667777888899999888888888777777888888888
Q ss_pred ccCCCCCchhHHHHHHhh
Q 012500 112 DNAPVPQKTAWLSMFYMC 129 (462)
Q Consensus 112 ~~~~~~~r~~~~~~~~~~ 129 (462)
+....+.-|..+|+....
T Consensus 353 ~nL~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 353 RNLSSELFGLVFGINTFV 370 (433)
T ss_pred HhhhhhhheeeeehHHHH
Confidence 888878888888876654
No 306
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=68.54 E-value=34 Score=29.68 Aligned_cols=70 Identities=10% Similarity=0.001 Sum_probs=43.9
Q ss_pred hhhHHHHHHHHHhhhhhhccc--cccCCchhHH----HHHHHHHHHHHhhhc-c--c--hhHHHHHHHHHhhcccccccc
Q 012500 36 SVNVLEFTVTQLVCSSHHCSQ--CSHNPFRLIG----VGLSVWTFATAGCGS-S--F--DFWSIAICRMLVGVGEASFIS 104 (462)
Q Consensus 36 s~~~~~~~~~~~~~~~~~g~l--dr~Grr~~l~----~~~~~~~~~~~~~~~-~--~--~~~~l~~~r~l~G~~~g~~~~ 104 (462)
......+..|..++....|.+ -++.||+.+. .+++++.++.+.... . + ++..+++.-|+.|+..=+..+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 456677777777887888888 5677777554 445555555554211 1 1 466678888888875543444
Q ss_pred c
Q 012500 105 L 105 (462)
Q Consensus 105 ~ 105 (462)
+
T Consensus 224 V 224 (267)
T PF07672_consen 224 V 224 (267)
T ss_pred H
Confidence 3
No 307
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=68.41 E-value=1.1e+02 Score=29.13 Aligned_cols=50 Identities=20% Similarity=0.105 Sum_probs=33.0
Q ss_pred CCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHH
Q 012500 114 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLA 168 (462)
Q Consensus 114 ~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 168 (462)
+.+++.+...++++++.+.|...-|...+.. |-++..+..+++-+.....
T Consensus 17 w~~~d~~W~l~l~GTAIGAGmLfLPI~~g~~-----Gf~p~lillll~~p~m~~s 66 (443)
T PRK13629 17 WRKSDTTWTLGLFGTAIGAGVLFFPIRAGFG-----GLIPILLMLVLAYPIAFYC 66 (443)
T ss_pred CccccchHHHHHHHHHHhHHHHHHHHHHhcc-----hHHHHHHHHHHHHHHHHHH
Confidence 3456778889999999988888888776643 5555555554444443333
No 308
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=68.26 E-value=1.2e+02 Score=29.37 Aligned_cols=15 Identities=27% Similarity=0.304 Sum_probs=7.0
Q ss_pred ccccchhHHHHHHhh
Q 012500 387 GDVPSSPLVGVLQDH 401 (462)
Q Consensus 387 g~~~~~~~~g~l~~~ 401 (462)
+....|+-.+...+.
T Consensus 174 ~~~~npf~~~iAq~i 188 (465)
T PF03606_consen 174 GPPSNPFTVGIAQKI 188 (465)
T ss_pred CCccChHHHHHHHHh
Confidence 455555444444333
No 309
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=68.00 E-value=76 Score=27.60 Aligned_cols=21 Identities=5% Similarity=-0.205 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHhhHHHHHHh
Q 012500 256 AYNFVIGAYSYWGPKAGYNIY 276 (462)
Q Consensus 256 ~~~~~~~~~~~~~p~~~~~~~ 276 (462)
......++..+.=..|.+++.
T Consensus 189 v~aGvlyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 189 VFAGVLYGSNFVPVIYIQDHP 209 (254)
T ss_pred HHHHHHHhcccchHHHHHhCc
Confidence 333344444443334555543
No 310
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=62.10 E-value=95 Score=26.84 Aligned_cols=20 Identities=15% Similarity=0.524 Sum_probs=11.1
Q ss_pred HhhhhhhhhhhHHHhhhccc
Q 012500 291 VCGIVGTISGGFILDQMGAT 310 (462)
Q Consensus 291 ~~~~~~~~~~g~l~d~~~~~ 310 (462)
+|..+..+-+-+++.|+..|
T Consensus 251 lCT~lAVigGk~lAskIS~r 270 (294)
T KOG2881|consen 251 LCTGLAVIGGKYLASKISVR 270 (294)
T ss_pred HHHHHHHhhhHHHhhhheeE
Confidence 44444444444567777766
No 311
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=61.69 E-value=1.5e+02 Score=28.07 Aligned_cols=34 Identities=9% Similarity=0.047 Sum_probs=23.6
Q ss_pred CCchhHHHHHHhhhhhhhhhhhhHHHHhhcccch
Q 012500 117 PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 150 (462)
Q Consensus 117 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gw 150 (462)
.+|.+.......+.-++..+-|+++.+.-...||
T Consensus 107 aeR~~~~~~ii~~~l~~~~vy~~~~~w~w~~~Gw 140 (399)
T PF00909_consen 107 AERIKFSAYIIFGFLWGGLVYPPLAHWVWGENGW 140 (399)
T ss_dssp CCCCHHHHHHHHHHHCCCCTHHHHHHHHHCHCHH
T ss_pred eceeeehHHHHHHHHHhhhhccccceEEEecchh
Confidence 4677777777777777888888876665443344
No 312
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=57.72 E-value=1.6e+02 Score=27.41 Aligned_cols=19 Identities=11% Similarity=0.211 Sum_probs=13.9
Q ss_pred hhccccchhHHHHHHhhhc
Q 012500 385 IFGDVPSSPLVGVLQDHVN 403 (462)
Q Consensus 385 ~~g~~~~~~~~g~l~~~~g 403 (462)
.....+.|.+.|.+....+
T Consensus 185 q~tn~Lapv~tg~Iitfvs 203 (503)
T KOG2601|consen 185 QSTNLLAPVITGLIITFVS 203 (503)
T ss_pred hhhhchhhhhhcccceeec
Confidence 3367788988888887654
No 313
>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=56.49 E-value=25 Score=27.99 Aligned_cols=9 Identities=11% Similarity=0.346 Sum_probs=3.5
Q ss_pred HHHHHHHHH
Q 012500 407 KTTLALTSI 415 (462)
Q Consensus 407 ~~~~~~~~~ 415 (462)
..++++..+
T Consensus 96 R~~~Vl~g~ 104 (163)
T PF06679_consen 96 RALYVLVGL 104 (163)
T ss_pred hhHHHHHHH
Confidence 334433333
No 314
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=53.01 E-value=43 Score=24.28 Aligned_cols=20 Identities=30% Similarity=0.577 Sum_probs=12.1
Q ss_pred HhhhhhhhhhhHHHhhhccc
Q 012500 291 VCGIVGTISGGFILDQMGAT 310 (462)
Q Consensus 291 ~~~~~~~~~~g~l~d~~~~~ 310 (462)
+.+++.....||+.||+-..
T Consensus 53 IsGilVGa~iG~llD~~agT 72 (116)
T COG5336 53 ISGILVGAGIGWLLDKFAGT 72 (116)
T ss_pred HHHHHHHHHHHHHHHHhcCC
Confidence 34444455568888887543
No 315
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=52.44 E-value=2.1 Score=36.71 Aligned_cols=61 Identities=8% Similarity=0.009 Sum_probs=35.9
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCcchh-hhhhhHHHhhhhhhh
Q 012500 238 TKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTI 298 (462)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 298 (462)
+...|++-.+....+.++..-...+....|+|.|..+..+.+.... ..-.+..++....+.
T Consensus 194 W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~ 255 (412)
T KOG4830|consen 194 WTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSM 255 (412)
T ss_pred chhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHh
Confidence 4455677777777777777666666667788877766555553222 333444444444333
No 316
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=51.47 E-value=2.2e+02 Score=26.95 Aligned_cols=12 Identities=17% Similarity=0.432 Sum_probs=5.7
Q ss_pred hhHHHHhhcccc
Q 012500 138 YVYGGVVGSHLN 149 (462)
Q Consensus 138 ~~~~~~l~~~~g 149 (462)
.++.|.+.+...
T Consensus 115 ~IvsGavaeR~~ 126 (404)
T TIGR03644 115 SIVSGAVAERMK 126 (404)
T ss_pred HHHHhHhhhccc
Confidence 344455555433
No 317
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=50.60 E-value=1.5e+02 Score=24.68 Aligned_cols=29 Identities=3% Similarity=0.048 Sum_probs=20.6
Q ss_pred hhhhhhhHHHhhhhhhhhhhHHHhhhccc
Q 012500 282 DMMFGGVTIVCGIVGTISGGFILDQMGAT 310 (462)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 310 (462)
.......+.++.++..+..+....+.+++
T Consensus 152 G~l~m~~FgLGT~p~ll~~~~~~~~l~~~ 180 (199)
T PF13386_consen 152 GALLMLAFGLGTLPALLLAGLLAGKLSRR 180 (199)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 33555777888888777778777777654
No 318
>PRK11588 hypothetical protein; Provisional
Probab=50.57 E-value=2.5e+02 Score=27.40 Aligned_cols=20 Identities=10% Similarity=0.056 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHhhc
Q 012500 152 YAFWGEAILMLPFAVLAFVI 171 (462)
Q Consensus 152 ~~f~~~~~~~~~~~~~~~~~ 171 (462)
.+|.+..++.++..++.|+.
T Consensus 17 ~~~vilf~iiv~aailT~ii 36 (506)
T PRK11588 17 DTLVIIFFVAILAALATYVV 36 (506)
T ss_pred CHHHHHHHHHHHHHHHHhee
Confidence 45666655556666666665
No 319
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=49.27 E-value=2.3e+02 Score=26.49 Aligned_cols=23 Identities=17% Similarity=0.248 Sum_probs=14.2
Q ss_pred hhhHHHHhhhhHHHHHHHHHHHH
Q 012500 235 SQDTKVLLQEKVYVVNVLGYIAY 257 (462)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~ 257 (462)
.+..++.+++|..+...++....
T Consensus 235 ~~~~~~~~~nP~~~a~~lgli~~ 257 (385)
T PF03547_consen 235 KKSILKLFKNPPLIAIILGLIIG 257 (385)
T ss_pred HHHHHHHHhCcHHHHHHHHHHHH
Confidence 34456667788777776654443
No 320
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=49.20 E-value=43 Score=26.35 Aligned_cols=31 Identities=6% Similarity=-0.121 Sum_probs=20.8
Q ss_pred ccccceeeeeccCCcchhhHHHHHHHHHHhh
Q 012500 355 TQAPVNYVCLHSVKPSLRALSMAISTVSIHI 385 (462)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (462)
..+..+.+.+..-.++..|+..|+-..-.|.
T Consensus 111 llGisYGilSaSWD~~r~GSllG~~e~~~N~ 141 (153)
T PF11947_consen 111 LLGISYGILSASWDPEREGSLLGWEEFKRNW 141 (153)
T ss_pred HHhhhhhhcccccCCCCCCCcccHHHHHHhH
Confidence 3444566667777788888888887654444
No 321
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=46.06 E-value=2.7e+02 Score=26.50 Aligned_cols=9 Identities=11% Similarity=0.287 Sum_probs=5.1
Q ss_pred eeeccCCcc
Q 012500 362 VCLHSVKPS 370 (462)
Q Consensus 362 ~~~~~~~~~ 370 (462)
.+.+++||+
T Consensus 436 ~~pR~Ip~~ 444 (593)
T KOG1277|consen 436 AIPREIPPK 444 (593)
T ss_pred cCCCCCCCc
Confidence 355666664
No 322
>COG4769 Predicted membrane protein [Function unknown]
Probab=45.54 E-value=19 Score=28.39 Aligned_cols=51 Identities=14% Similarity=0.114 Sum_probs=35.6
Q ss_pred HHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHhhc
Q 012500 41 EFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV 97 (462)
Q Consensus 41 ~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 97 (462)
.+.....+.+.+.-++ .++|+|..-.+|.. ..-++.+|..++.+.+++.|-
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS------~mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGIS------VMGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehh------hHHHHHHhHHHHHHHHHHHhc
Confidence 3444445556666677 88898887555543 334677999999999999874
No 323
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=43.78 E-value=54 Score=24.50 Aligned_cols=20 Identities=20% Similarity=0.399 Sum_probs=10.4
Q ss_pred chhHHHHHHHHHHHHHHHHH
Q 012500 404 NWRKTTLALTSIFFLAAGIW 423 (462)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~ 423 (462)
.|++..+..++++++..+++
T Consensus 34 pWNysiL~Ls~vvlvi~~~L 53 (125)
T PF15048_consen 34 PWNYSILALSFVVLVISFFL 53 (125)
T ss_pred CcchHHHHHHHHHHHHHHHH
Confidence 36666666655544433333
No 324
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein
Probab=40.56 E-value=2.1e+02 Score=27.69 Aligned_cols=46 Identities=11% Similarity=-0.161 Sum_probs=31.0
Q ss_pred hhhhhhccc-cccCC---chhHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 012500 48 VCSSHHCSQ-CSHNP---FRLIGVGLSVWTFATAGCGSSFDFWSIAICRM 93 (462)
Q Consensus 48 ~~~~~~g~l-dr~Gr---r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 93 (462)
....+-.++ +|.++ |+......+.+.+++++.++.+++....+.-.
T Consensus 323 ~~~Wl~~YvY~rl~~~~~~~~~~~~~~t~~~sa~WHG~~~gYyl~fl~~~ 372 (465)
T PLN02332 323 VSTWLRHYVYERLVPKGKKPGFFQLLATQTVSAVWHGLYPGYILFFVQSA 372 (465)
T ss_pred HHHHHHHhEEeeCccCCcchhHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 334455566 66654 44455666788899999999999887665433
No 325
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=40.28 E-value=36 Score=24.86 Aligned_cols=32 Identities=19% Similarity=0.192 Sum_probs=24.3
Q ss_pred hhcccchHHHHHHHHHHHHHHHHHHhhccccc
Q 012500 144 VGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 175 (462)
Q Consensus 144 l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 175 (462)
-.+..+|+.+|++...++++.+.+.+.+.|++
T Consensus 53 ~~d~e~we~~~f~~~~~~~v~~~~~~~y~PD~ 84 (105)
T PF10183_consen 53 KRDWEGWELPFFFGFSGSLVFGGVFLAYKPDT 84 (105)
T ss_pred cchHhhhHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 33556899999998888878777777777753
No 326
>PRK10263 DNA translocase FtsK; Provisional
Probab=40.20 E-value=5.7e+02 Score=28.54 Aligned_cols=21 Identities=14% Similarity=0.199 Sum_probs=13.3
Q ss_pred HHHhhhhhhhhhhHHHhhhcc
Q 012500 289 TIVCGIVGTISGGFILDQMGA 309 (462)
Q Consensus 289 ~~~~~~~~~~~~g~l~d~~~~ 309 (462)
-..++.+|..+...+..-+|.
T Consensus 61 ~Nl~GiVGA~LAD~L~~LFGl 81 (1355)
T PRK10263 61 HNLGGMPGAWLADTLFFIFGV 81 (1355)
T ss_pred ccccchHHHHHHHHHHHHHhH
Confidence 455666666666666666665
No 327
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=38.93 E-value=35 Score=23.82 Aligned_cols=16 Identities=19% Similarity=0.416 Sum_probs=9.5
Q ss_pred ccccchhHHHHHHhhhc
Q 012500 387 GDVPSSPLVGVLQDHVN 403 (462)
Q Consensus 387 g~~~~~~~~g~l~~~~g 403 (462)
++++|- +.|+..+..+
T Consensus 35 ~aiVg~-i~Gf~~Qqls 50 (101)
T KOG4112|consen 35 GAIVGF-IYGFAQQQLS 50 (101)
T ss_pred HHHHHH-HHHHHHHHHH
Confidence 444444 6777777554
No 328
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=37.47 E-value=48 Score=28.77 Aligned_cols=9 Identities=22% Similarity=0.291 Sum_probs=4.4
Q ss_pred HHHHHHhhh
Q 012500 394 LVGVLQDHV 402 (462)
Q Consensus 394 ~~g~l~~~~ 402 (462)
+.||...++
T Consensus 94 l~Gw~~grf 102 (254)
T PF07857_consen 94 LTGWASGRF 102 (254)
T ss_pred HHHHHHhhc
Confidence 445555444
No 329
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=35.60 E-value=1.7e+02 Score=21.21 Aligned_cols=38 Identities=13% Similarity=0.270 Sum_probs=21.4
Q ss_pred HHHHHhhhhhhhhhhhhHHHHhhcccc----hHHHHHHHHHH
Q 012500 123 LSMFYMCIPTGVALGYVYGGVVGSHLN----WRYAFWGEAIL 160 (462)
Q Consensus 123 ~~~~~~~~~~G~~~g~~~~~~l~~~~g----wr~~f~~~~~~ 160 (462)
+|.......+..++|..+|-++-++++ |-.+|++.|+.
T Consensus 45 ~g~IG~~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~ 86 (100)
T TIGR02230 45 FGLIGWSVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVV 86 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 334444444555666666667766654 55555555553
No 330
>PTZ00370 STEVOR; Provisional
Probab=35.24 E-value=2.6e+02 Score=24.69 Aligned_cols=34 Identities=6% Similarity=0.091 Sum_probs=16.4
Q ss_pred cchhHHHHHHhhhcchhHHHHHHHHHHHHHHHHHH
Q 012500 390 PSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 424 (462)
Q Consensus 390 ~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 424 (462)
.+| ..+.....+..+..+.++..++.++.+++++
T Consensus 243 agt-AAtaAsaaF~Pygiaalvllil~vvliilYi 276 (296)
T PTZ00370 243 AGT-AASAASSAFYPYGIAALVLLILAVVLIILYI 276 (296)
T ss_pred cch-HHHHHHHhhcccHHHHHHHHHHHHHHHHHHH
Confidence 344 4444455555555555555544444444443
No 331
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=33.76 E-value=2.7e+02 Score=22.87 Aligned_cols=56 Identities=9% Similarity=-0.089 Sum_probs=31.2
Q ss_pred ccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHH
Q 012500 102 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAI 159 (462)
Q Consensus 102 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~ 159 (462)
-.....+++.+..|+++|.++.-+-..+..+=-++.-..+.++.+. |++..++.|+
T Consensus 13 DN~~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~--~~~i~~igG~ 68 (183)
T PF03741_consen 13 DNAFVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSI--FPWILLIGGL 68 (183)
T ss_pred hHHHHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 3444556677778887776655443333233334444556666664 4566666655
No 332
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=33.49 E-value=1.5e+02 Score=20.13 Aligned_cols=53 Identities=9% Similarity=0.137 Sum_probs=28.5
Q ss_pred hHHHHHHhhhhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHhhccccccCCC
Q 012500 121 AWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 179 (462)
Q Consensus 121 ~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 179 (462)
++--+.+....++.+++-.+| ++.+. .+.++++.++..+ +..+..+|+.+...
T Consensus 8 ~ae~l~~~il~~~~iisfi~G-y~~q~--~~~~~~~~~~g~~---~~~lv~vP~Wp~y~ 60 (76)
T PF06645_consen 8 LAEKLMQYILIISAIISFIVG-YITQS--FSYTFYIYGAGVV---LTLLVVVPPWPFYN 60 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHH--HHHHHHHHHHHHH---HHHhheeCCcHhhc
Confidence 344455566666666665444 44442 5666666654333 33344458777654
No 333
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=33.25 E-value=3.9e+02 Score=24.59 Aligned_cols=71 Identities=11% Similarity=-0.056 Sum_probs=40.0
Q ss_pred HHhhhhhhhhhhHHHhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccceeeeecc
Q 012500 290 IVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHS 366 (462)
Q Consensus 290 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (462)
.+.-+..+++.+.+.+++|-| +.+.......... ...-..+.....+......|++.+..+..--+++++.
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K-----~tm~lav~~Y~ly-iA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~ 138 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTK-----WTMVLAVFPYALY-IAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPM 138 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhH-----HHHHHHHHHHHHH-HHhhcchhHHhhccHHHhhccccccccccCcceecHH
Confidence 334445566666888999987 5554443333222 2222234455566666677777776666555555443
No 334
>PRK10263 DNA translocase FtsK; Provisional
Probab=31.47 E-value=2.6e+02 Score=30.95 Aligned_cols=25 Identities=12% Similarity=0.099 Sum_probs=13.8
Q ss_pred hhhhhhhhhHHHHhhcccchHHHHH
Q 012500 131 PTGVALGYVYGGVVGSHLNWRYAFW 155 (462)
Q Consensus 131 ~~G~~~g~~~~~~l~~~~gwr~~f~ 155 (462)
..|+++|..++..+...+|.-...+
T Consensus 141 ~gGGIIG~lLs~lL~~LfG~vGa~L 165 (1355)
T PRK10263 141 ASGGVIGSLLSTTLQPLLHSSGGTI 165 (1355)
T ss_pred cccchHHHHHHHHHHHHHhHHHHHH
Confidence 3466666666666665555443333
No 335
>COG5249 RER1 Golgi protein involved in Golgi-to-ER retrieval [Intracellular trafficking and secretion]
Probab=31.32 E-value=2.5e+02 Score=21.68 Aligned_cols=14 Identities=14% Similarity=0.320 Sum_probs=9.9
Q ss_pred cchHHHHHHHHHHH
Q 012500 148 LNWRYAFWGEAILM 161 (462)
Q Consensus 148 ~gwr~~f~~~~~~~ 161 (462)
-||-...+..|+..
T Consensus 55 ~gwY~icY~LgiyL 68 (180)
T COG5249 55 GGWYLICYCLGIYL 68 (180)
T ss_pred cchhhHHHHHHHHH
Confidence 47888887777643
No 336
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=29.62 E-value=5.9e+02 Score=25.55 Aligned_cols=23 Identities=26% Similarity=0.339 Sum_probs=10.5
Q ss_pred hhhhhhhhhhhhHHHHhhcccch
Q 012500 128 MCIPTGVALGYVYGGVVGSHLNW 150 (462)
Q Consensus 128 ~~~~~G~~~g~~~~~~l~~~~gw 150 (462)
..+.+|.++...+.|.+....||
T Consensus 213 l~y~lG~~~ty~~lG~~a~~~G~ 235 (571)
T PRK00293 213 FVYVQGMALTYTLLGLVVAAAGL 235 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555554444444433343
No 337
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=29.43 E-value=1.4e+02 Score=21.59 Aligned_cols=37 Identities=0% Similarity=-0.252 Sum_probs=18.9
Q ss_pred hHHHHHHHHHhhhhhhccc--cccCCchhHHHHHHHHHHH
Q 012500 38 NVLEFTVTQLVCSSHHCSQ--CSHNPFRLIGVGLSVWTFA 75 (462)
Q Consensus 38 ~~~~~~~~~~~~~~~~g~l--dr~Grr~~l~~~~~~~~~~ 75 (462)
+.....+.. +.+.+.|+. .++|-++.+.+.+++.+++
T Consensus 48 IG~~~v~pi-l~G~~lG~WLD~~~~t~~~~tl~~lllGv~ 86 (100)
T TIGR02230 48 IGWSVAIPT-LLGVAVGIWLDRHYPSPFSWTLTMLIVGVV 86 (100)
T ss_pred HHHHHHHHH-HHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 333344444 444445555 5677766555555544444
No 338
>COG3619 Predicted membrane protein [Function unknown]
Probab=28.97 E-value=3.7e+02 Score=22.99 Aligned_cols=40 Identities=8% Similarity=0.176 Sum_probs=21.7
Q ss_pred hcccCCCC-CchhHHHHHHhhhhhhhhhhhhHHHHhhcccc
Q 012500 110 IDDNAPVP-QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN 149 (462)
Q Consensus 110 i~~~~~~~-~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g 149 (462)
+.++...| +.-..-...+...-++.++|...++.+...+|
T Consensus 156 l~~~l~~k~~~~~~~~~~~~~~il~f~~GAi~g~ll~~~~g 196 (226)
T COG3619 156 LGRYLSGKDKEKLRDWLIYLSLILSFIVGAICGALLTLFFG 196 (226)
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444433 22333444555556677777777777665544
No 339
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=28.77 E-value=5.6e+02 Score=25.02 Aligned_cols=71 Identities=8% Similarity=-0.078 Sum_probs=36.8
Q ss_pred HHHHHHhccccceeeeeccCCc-chhhHHHHHHHHHHhhhccccchhHHHHHHhhhcchhHHHHHHHHHHHHH
Q 012500 348 GELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLA 419 (462)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 419 (462)
.+.+....-.+--.-+.+.+|. +.++.-+|-.+...+.+..++.-..++.+.+..| |-..-.+.-.+.++.
T Consensus 294 Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~G-W~~~AlitPiv~lit 365 (509)
T COG3202 294 YGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVG-WFTGALITPLVMLIT 365 (509)
T ss_pred HHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhh-HHHHHHHHHHHHHHH
Confidence 3334333333334444455555 4466666666555555444555666777777766 544444444444443
No 340
>PRK10712 PTS system fructose-specific transporter subunits IIBC; Provisional
Probab=28.73 E-value=6e+02 Score=25.39 Aligned_cols=20 Identities=15% Similarity=0.511 Sum_probs=10.8
Q ss_pred HHhhhhhhhhhhHHHhhhcc
Q 012500 290 IVCGIVGTISGGFILDQMGA 309 (462)
Q Consensus 290 ~~~~~~~~~~~g~l~d~~~~ 309 (462)
.++++++.++.|++...+.+
T Consensus 316 FlG~Ilag~lagyv~~~l~K 335 (563)
T PRK10712 316 FIGGIIAGFLAGYVAKLIST 335 (563)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44555566666665554443
No 341
>PF11511 RhodobacterPufX: Intrinsic membrane protein PufX; InterPro: IPR020169 PufX organises RC-LH1, the photosynthesis reaction centre-light harvesting complex 1 core complex of Rhodobacter sphaeroides []. It also facilitates the exchange of quinol for quinone between the reaction centre and cytochrome bc(1) complexes. In organic solvent, PufX contains two hydrophobic helices which are flanked by unstructured regions and connected by a helical bend [].; PDB: 2DW3_A 2ITA_A 2NRG_A.
Probab=28.72 E-value=1.7e+02 Score=19.14 Aligned_cols=31 Identities=10% Similarity=0.096 Sum_probs=15.1
Q ss_pred chHHHHHHHHHHHHHHHHHHhhccccccCCC
Q 012500 149 NWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 179 (462)
Q Consensus 149 gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 179 (462)
||-.++.+...+.++..-.+=.++||..+..
T Consensus 29 g~Aav~~~~~~~~l~~~~~iG~~LPe~s~~a 59 (67)
T PF11511_consen 29 GYAAVFFLGLWFLLVALYFIGLLLPERSRQA 59 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSTTTCSS-
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCchhcccC
Confidence 4555555554444444334444557755443
No 342
>PRK13712 conjugal transfer protein TrbA; Provisional
Probab=28.49 E-value=59 Score=22.52 Aligned_cols=65 Identities=12% Similarity=0.173 Sum_probs=35.6
Q ss_pred Hhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhcc--chhHHHHHHHHHhhcccccccccccchhccc
Q 012500 47 LVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSS--FDFWSIAICRMLVGVGEASFISLAAPFIDDN 113 (462)
Q Consensus 47 ~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~ 113 (462)
++...+.|++ .--+.|++++.+.+.+.+-.+.+-.. .|+|.+.-+ ++-=|.+...+...+-+.+.
T Consensus 15 li~~iiagyffs~~ndr~mfllsslvflvini~~l~vl~~sl~flcga--imnq~aa~vvsmv~~~lp~v 82 (115)
T PRK13712 15 LIFVIIAGYFFSERNDRKMFLLSSLVFLVINIACLYVLTASLWFLCGA--IMNQGAAMVVSMVISSLPNV 82 (115)
T ss_pred EEEEEEeeEEeecCCCccEEEhHhHHHHHHhHhhheeecHHHHHHHHH--HHcCCceeeeehhhhcCCCc
Confidence 3456677888 55566677777777777777666543 455544433 33333343343333334333
No 343
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=28.21 E-value=3.2e+02 Score=22.02 Aligned_cols=59 Identities=10% Similarity=-0.021 Sum_probs=32.5
Q ss_pred ccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhhc-cc-----chHHHHHHHHHHHHHHHHHHhh
Q 012500 112 DNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-HL-----NWRYAFWGEAILMLPFAVLAFV 170 (462)
Q Consensus 112 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-~~-----gwr~~f~~~~~~~~~~~~~~~~ 170 (462)
..+|.+++.+..+.+.++.-.+...=-.+=+.+.. +. .+...+++.++++.+..++.=.
T Consensus 13 ~~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN~ 77 (166)
T PF05255_consen 13 PWFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVNS 77 (166)
T ss_pred CCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhcc
Confidence 35555566666666555544443333333333322 22 5788888988877665554433
No 344
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=28.13 E-value=1.2e+02 Score=24.88 Aligned_cols=24 Identities=0% Similarity=-0.183 Sum_probs=21.2
Q ss_pred hHHHHHHHHHhhhhhhccc-cccCC
Q 012500 38 NVLEFTVTQLVCSSHHCSQ-CSHNP 61 (462)
Q Consensus 38 ~~~~~~~~~~~~~~~~g~l-dr~Gr 61 (462)
...+|.+++.+.+.+.|++ ||..+
T Consensus 87 PTgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 87 PTGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred CchhHHHHHHHHHHHHHHHHHhhhc
Confidence 5688999999999999999 99875
No 345
>PF01864 DUF46: Putative integral membrane protein DUF46; InterPro: IPR002726 This archaebacterial protein has no known function. It contains several predicted transmembrane regions, suggesting it is an integral membrane protein.
Probab=27.57 E-value=2e+02 Score=23.44 Aligned_cols=29 Identities=21% Similarity=0.430 Sum_probs=21.0
Q ss_pred hhhhHHHhhhhhhhhhhHHHhhhcccccc
Q 012500 285 FGGVTIVCGIVGTISGGFILDQMGATISN 313 (462)
Q Consensus 285 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 313 (462)
.......++++|=+..+++-+|++.+...
T Consensus 90 ~g~ll~~gamlGDl~~SFIKRRlgi~~G~ 118 (175)
T PF01864_consen 90 LGFLLGLGAMLGDLPGSFIKRRLGIPRGA 118 (175)
T ss_pred HHHHHHHHHHHhHHHHHHHHHhcCCCCCC
Confidence 34556777788888888888888876443
No 346
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=27.26 E-value=2.9e+02 Score=24.62 Aligned_cols=57 Identities=11% Similarity=0.141 Sum_probs=34.5
Q ss_pred HHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHhh
Q 012500 88 IAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG 145 (462)
Q Consensus 88 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~ 145 (462)
--..|.+.|+-.- .+..++++++-.||++++--..--...+.+++.++-|++|-.+.
T Consensus 22 ~~~lr~~~g~~~v-lf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~ 78 (287)
T PF07760_consen 22 IPPLRVILGFPFV-LFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLN 78 (287)
T ss_pred hhHHHHHHHHHHH-HHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777777554 34568899999999655433333334444555556665555443
No 347
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=27.22 E-value=1.4e+02 Score=21.84 Aligned_cols=45 Identities=13% Similarity=-0.091 Sum_probs=35.7
Q ss_pred hHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhcc
Q 012500 38 NVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSS 82 (462)
Q Consensus 38 ~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~ 82 (462)
...+|.--+++.++++++. |+.-+.+.=.+|..+..++..+.-+.
T Consensus 59 vYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 59 VYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred HHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 6778888888999999999 99888888777777777776665544
No 348
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=27.15 E-value=52 Score=31.81 Aligned_cols=36 Identities=6% Similarity=0.030 Sum_probs=14.8
Q ss_pred HHHHhCCCcchh-hhhhhHHHhhhhhhhhhhHHHhhh
Q 012500 272 GYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQM 307 (462)
Q Consensus 272 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~ 307 (462)
+.-.+..++..- .+.+...+.-++..+++|+.+.|+
T Consensus 350 fA~lGflSPs~RGsLmT~~~~l~v~~G~~agY~s~rl 386 (628)
T KOG1278|consen 350 FACLGFLSPSSRGSLMTAMVLLFVFMGFVAGYVSARL 386 (628)
T ss_pred HHHhccCCccccccHHHHHHHHHHHHHHhhhhhhhhh
Confidence 333344454332 222223333344444555555554
No 349
>COG0814 SdaC Amino acid permeases [Amino acid transport and metabolism]
Probab=26.78 E-value=5.6e+02 Score=24.38 Aligned_cols=26 Identities=19% Similarity=-0.050 Sum_probs=17.2
Q ss_pred CCCchhHHHHHHhhhhhhhhhhhhHH
Q 012500 116 VPQKTAWLSMFYMCIPTGVALGYVYG 141 (462)
Q Consensus 116 ~~~r~~~~~~~~~~~~~G~~~g~~~~ 141 (462)
++.++..+.+..+..+.|...-|...
T Consensus 9 ~s~~~~vl~l~gT~IGAGvL~lP~a~ 34 (415)
T COG0814 9 SSDLGGVLILAGTAIGAGVLFLPVAF 34 (415)
T ss_pred cchHHHHHHHHccccccchhhhhHHh
Confidence 35667777777777777766666543
No 350
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=25.79 E-value=5.8e+02 Score=24.20 Aligned_cols=16 Identities=13% Similarity=0.376 Sum_probs=7.8
Q ss_pred hhhhhHHHHhhcccch
Q 012500 135 ALGYVYGGVVGSHLNW 150 (462)
Q Consensus 135 ~~g~~~~~~l~~~~gw 150 (462)
.-..++.+.+.+....
T Consensus 105 ~t~~I~sGavaeR~~~ 120 (403)
T TIGR00836 105 IAATIISGAVAERMKF 120 (403)
T ss_pred HHHHHHHHHHhhcccH
Confidence 3334455556665443
No 351
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=25.65 E-value=2.2e+02 Score=25.29 Aligned_cols=36 Identities=14% Similarity=0.057 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHhhhcc-chhHHHHHHHHHhhcccc
Q 012500 65 IGVGLSVWTFATAGCGSS-FDFWSIAICRMLVGVGEA 100 (462)
Q Consensus 65 l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~g 100 (462)
++.+.+++++++++..+. ++.+.+.+.-++.+++.+
T Consensus 2 L~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ 38 (284)
T PF12805_consen 2 LIATLLCFALASLLVGLLFPYPWLLILVLALLTFFFG 38 (284)
T ss_pred HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 344555565555555554 444555555566665554
No 352
>PF13268 DUF4059: Protein of unknown function (DUF4059)
Probab=25.48 E-value=1.9e+02 Score=19.21 Aligned_cols=24 Identities=29% Similarity=0.598 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHhhccccccchh
Q 012500 415 IFFLAAGIWFVGIFLKSIDKFNED 438 (462)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~ 438 (462)
.......++..++..++++|+..+
T Consensus 19 ~V~~~~~~wi~~Ra~~~~DKT~~e 42 (72)
T PF13268_consen 19 LVLLVSGIWILWRALRKKDKTAKE 42 (72)
T ss_pred HHHHHHHHHHHHHHHHcCCCcHHH
Confidence 333344455555555555554433
No 353
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=24.63 E-value=1.7e+02 Score=23.07 Aligned_cols=26 Identities=4% Similarity=-0.235 Sum_probs=22.4
Q ss_pred hHHHHHHHHHhhhhhhccc-cccCCch
Q 012500 38 NVLEFTVTQLVCSSHHCSQ-CSHNPFR 63 (462)
Q Consensus 38 ~~~~~~~~~~~~~~~~g~l-dr~Grr~ 63 (462)
...+|.+|..+.+.+.|++ +|..+++
T Consensus 58 PTgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 58 PTGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CCChHHHHHHHHHHHHHHHHHhccccc
Confidence 4578999999999999999 9988764
No 354
>COG1288 Predicted membrane protein [Function unknown]
Probab=24.50 E-value=2.1e+02 Score=27.15 Aligned_cols=21 Identities=33% Similarity=0.352 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhc
Q 012500 151 RYAFWGEAILMLPFAVLAFVI 171 (462)
Q Consensus 151 r~~f~~~~~~~~~~~~~~~~~ 171 (462)
...|.+..++.++..++.|+.
T Consensus 13 P~~ftILf~ii~~~ailTwvi 33 (481)
T COG1288 13 PSAFTILFIIIILAAILTWVI 33 (481)
T ss_pred CcHHHHHHHHHHHHHHHheee
Confidence 345556555555666666655
No 355
>COG2056 Predicted permease [General function prediction only]
Probab=24.07 E-value=4.2e+02 Score=24.47 Aligned_cols=18 Identities=6% Similarity=-0.160 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 012500 407 KTTLALTSIFFLAAGIWF 424 (462)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~ 424 (462)
.++++-+...+.+.++..
T Consensus 192 ~am~ip~lgMi~GLl~ai 209 (444)
T COG2056 192 KAMWIPGLGMIVGLLLAI 209 (444)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 345555555555555444
No 356
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=23.19 E-value=1.8e+02 Score=17.54 Aligned_cols=37 Identities=14% Similarity=0.154 Sum_probs=16.2
Q ss_pred hhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHh
Q 012500 133 GVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 169 (462)
Q Consensus 133 G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 169 (462)
|..+|..+.+.+....++.+.-++.++++.+..+..+
T Consensus 7 Ga~vGg~l~~~lg~~~~~~~~~~i~aviGAiill~i~ 43 (48)
T PF04226_consen 7 GAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILLFIY 43 (48)
T ss_pred HHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHH
Confidence 3344444433333222345555555555554444433
No 357
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=22.92 E-value=2.1e+02 Score=18.11 Aligned_cols=40 Identities=20% Similarity=0.227 Sum_probs=25.0
Q ss_pred hhhhhhhhhhHHHHhhcccchHHHHHHHHHHHHHHHHHHh
Q 012500 130 IPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 169 (462)
Q Consensus 130 ~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 169 (462)
.-+|.++|...+..-...++++....+..+.+++..++..
T Consensus 11 ~il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~ 50 (57)
T PF11151_consen 11 FILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIA 50 (57)
T ss_pred HHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 3456677766666655567777776666666655555544
No 358
>COG2836 Uncharacterized conserved protein [Function unknown]
Probab=22.73 E-value=4.8e+02 Score=22.23 Aligned_cols=27 Identities=4% Similarity=-0.020 Sum_probs=19.0
Q ss_pred hhhhhhHHHhhhhhhhhhhHHHhhhcc
Q 012500 283 MMFGGVTIVCGIVGTISGGFILDQMGA 309 (462)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~g~l~d~~~~ 309 (462)
...+..+.++..+..+..|..++++..
T Consensus 167 al~mlaFGlGTlP~ll~~G~~s~~~s~ 193 (232)
T COG2836 167 ALVMLAFGLGTLPNLLAMGIFSSKLSK 193 (232)
T ss_pred HHHHHHHhhcccHHHHHHHHHHHHHHH
Confidence 344566777787777888888887653
No 359
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=22.05 E-value=2.4e+02 Score=29.48 Aligned_cols=44 Identities=11% Similarity=0.048 Sum_probs=22.9
Q ss_pred HHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhh
Q 012500 87 SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIP 131 (462)
Q Consensus 87 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 131 (462)
..++.-+..|.+.|....+...++..... ..-...++++..+.-
T Consensus 185 ~vl~~a~~gG~~~Gaa~Gv~~Gli~~l~~-~~~~~~~~~~af~GL 228 (764)
T TIGR02865 185 AVLLISYIGGSGAGAAGGVVIGVILGLAN-NANLYQIGVFGFAGL 228 (764)
T ss_pred HHHHHHHhcCchHhHHHHHHHHHHHHhcC-ccHHHHHHHHHHHHH
Confidence 34445566677766666655556555543 223334455444433
No 360
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=21.99 E-value=6.5e+02 Score=23.45 Aligned_cols=135 Identities=13% Similarity=-0.031 Sum_probs=71.3
Q ss_pred cchhhHHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHH-----HHhhhc----cchhHHHHHHHHHhhccccccc
Q 012500 34 GSSVNVLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFA-----TAGCGS----SFDFWSIAICRMLVGVGEASFI 103 (462)
Q Consensus 34 ~~s~~~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~-----~~~~~~----~~~~~~l~~~r~l~G~~~g~~~ 103 (462)
.+|.+.++|....-+++..+-++ |.--.-+.+..-.++..++ .+-..| .++-+.+++.-++.|.-.|...
T Consensus 44 q~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LVG~Ei 123 (508)
T COG4262 44 QTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVLVGAEI 123 (508)
T ss_pred ehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHHHhcch
Confidence 36778899999988999988888 5322222222212221111 111122 2466778889999999999999
Q ss_pred ccccchhcc-cCCCCCchhHHHHHHhhhhhhhhhhhhHHHHh-hcccchHHHHHHHHHHHHHHHHHHhhc
Q 012500 104 SLAAPFIDD-NAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV-GSHLNWRYAFWGEAILMLPFAVLAFVI 171 (462)
Q Consensus 104 ~~~~~~i~~-~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l-~~~~gwr~~f~~~~~~~~~~~~~~~~~ 171 (462)
|..+.++.. ....+. ..+..-..-.+|.+.+.+.-.++ ....|---.-...|++.++.++...+.
T Consensus 124 PL~mrml~~r~a~~k~---~~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl~aAvv~~fl 190 (508)
T COG4262 124 PLLMRMLQRRQAKAKD---LGSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNLAAAVVTLFL 190 (508)
T ss_pred HHHHHHHHHHHHHHHh---hhhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 998888766 221111 12222222445555555443332 233443222233444444444443333
No 361
>PRK10720 uracil transporter; Provisional
Probab=21.85 E-value=4.2e+02 Score=25.37 Aligned_cols=20 Identities=10% Similarity=0.024 Sum_probs=10.5
Q ss_pred ccCCchhHHHHHHHHHHHHH
Q 012500 58 SHNPFRLIGVGLSVWTFATA 77 (462)
Q Consensus 58 r~Grr~~l~~~~~~~~~~~~ 77 (462)
|...|++...+.++..+..+
T Consensus 298 ~v~sr~v~~~a~~~li~lg~ 317 (428)
T PRK10720 298 RVYSTWVIGGAAIIAILLSC 317 (428)
T ss_pred ccchhHHHHHHHHHHHHHHH
Confidence 44456666655555544444
No 362
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=21.04 E-value=1.9e+02 Score=22.91 Aligned_cols=51 Identities=8% Similarity=0.033 Sum_probs=34.5
Q ss_pred chhHHHHHHHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhh
Q 012500 83 FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVAL 136 (462)
Q Consensus 83 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 136 (462)
+++..+++.-.+.|+|.- .+.+.+++.-.++++-|..+|+-..-.+++-+.
T Consensus 95 P~~~~~~~S~~~Fg~gll---GisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGLL---GISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CchHHHHHHHHHHHHHHH---hhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 345556665555555433 345667777778788999999988888776544
No 363
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=20.77 E-value=1.9e+02 Score=22.79 Aligned_cols=51 Identities=6% Similarity=0.071 Sum_probs=33.2
Q ss_pred HHHHHHHHHhhhhhhccc-cccCCchhHHHHHHHHHHHHHhhhccchhHHHHHHHHHh
Q 012500 39 VLEFTVTQLVCSSHHCSQ-CSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLV 95 (462)
Q Consensus 39 ~~~~~~~~~~~~~~~g~l-dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 95 (462)
...+.++..+.+...-.+ .|..||+.-..+. ++.-+.++|..|+.+++++.
T Consensus 67 ~f~~Sl~Ggl~S~~vM~ll~~~~~~~~S~~gi------Si~Gai~HN~gQl~va~~i~ 118 (148)
T PF07456_consen 67 SFLFSLAGGLLSLLVMALLKKLFKKKFSLIGI------SIAGAIAHNIGQLIVASLII 118 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCccHHHH------HHHHHHHHHHHHHHHHHHHH
Confidence 355666666666777777 7777776555543 23445678888888777653
No 364
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=20.45 E-value=29 Score=29.32 Aligned_cols=53 Identities=17% Similarity=0.145 Sum_probs=37.9
Q ss_pred HHHHhhcccccccccccchhcccCCCCCchhHHHHHHhhhhhhhhhhhhHHHHh
Q 012500 91 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 144 (462)
Q Consensus 91 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 144 (462)
.-.-.|+|+|..+.++..-+.+.+| +......++...+..+..+.|-.+.-++
T Consensus 177 LAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 177 LAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344689999999999899999997 6666777777776666666665544433
Done!